Query 019943
Match_columns 333
No_of_seqs 164 out of 637
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 09:25:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019943.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019943hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1eyb_A Homogentisate 1,2-dioxy 100.0 2E-124 5E-129 935.5 28.6 304 5-312 157-464 (471)
2 3d0j_A Uncharacterized protein 99.3 8.6E-12 2.9E-16 107.7 9.5 77 4-81 26-112 (140)
3 1yfu_A 3-hydroxyanthranilate-3 98.8 2.3E-08 7.7E-13 89.1 9.5 62 20-81 49-114 (174)
4 2qnk_A 3-hydroxyanthranilate 3 98.6 8.2E-08 2.8E-12 91.2 8.9 60 19-79 44-107 (286)
5 1zvf_A 3-hydroxyanthranilate 3 98.5 2.5E-07 8.5E-12 82.5 8.9 59 20-79 48-114 (176)
6 3lwc_A Uncharacterized protein 98.4 5.4E-07 1.8E-11 74.3 7.7 72 5-78 40-111 (119)
7 2opk_A Hypothetical protein; p 98.4 1.7E-06 5.9E-11 69.9 9.0 50 20-69 47-98 (112)
8 2i45_A Hypothetical protein; n 98.3 6.3E-07 2.2E-11 70.6 5.6 60 21-81 43-103 (107)
9 3d82_A Cupin 2, conserved barr 98.3 1.2E-06 3.9E-11 67.4 6.6 56 22-78 46-101 (102)
10 1v70_A Probable antibiotics sy 98.2 6.7E-06 2.3E-10 62.6 9.7 58 21-78 44-102 (105)
11 4h7l_A Uncharacterized protein 98.2 4.9E-06 1.7E-10 73.0 9.2 71 3-78 45-117 (157)
12 3l2h_A Putative sugar phosphat 98.2 2.3E-05 7.9E-10 66.2 12.8 84 6-89 47-135 (162)
13 4axo_A EUTQ, ethanolamine util 98.2 2.4E-06 8.3E-11 74.2 6.9 68 5-76 66-133 (151)
14 2o8q_A Hypothetical protein; c 98.2 7.6E-06 2.6E-10 66.7 9.3 55 20-74 58-113 (134)
15 2gu9_A Tetracenomycin polyketi 98.2 1.7E-05 5.8E-10 61.6 10.8 58 22-79 40-98 (113)
16 3myx_A Uncharacterized protein 98.1 4.9E-05 1.7E-09 70.5 14.1 70 5-78 47-116 (238)
17 2fqp_A Hypothetical protein BP 98.1 1.7E-05 5.9E-10 61.7 9.0 61 20-80 33-96 (97)
18 4e2g_A Cupin 2 conserved barre 98.0 2.1E-05 7.1E-10 63.1 9.1 52 25-76 60-111 (126)
19 1o5u_A Novel thermotoga mariti 98.0 9.5E-06 3.3E-10 65.2 6.4 55 22-76 45-100 (101)
20 2oa2_A BH2720 protein; 1017534 98.0 4.8E-05 1.7E-09 63.6 10.9 58 20-77 58-122 (148)
21 3bcw_A Uncharacterized protein 98.0 5.4E-06 1.8E-10 69.1 4.5 70 5-77 49-120 (123)
22 2pyt_A Ethanolamine utilizatio 98.0 1.3E-05 4.3E-10 67.4 6.6 54 22-76 71-124 (133)
23 2ozj_A Cupin 2, conserved barr 97.9 4.2E-05 1.4E-09 60.5 9.2 56 23-79 55-110 (114)
24 3i7d_A Sugar phosphate isomera 97.9 5.8E-05 2E-09 64.8 10.7 60 20-79 59-121 (163)
25 1yhf_A Hypothetical protein SP 97.9 6.1E-05 2.1E-09 59.3 9.9 55 24-79 58-112 (115)
26 4i4a_A Similar to unknown prot 97.9 4.6E-05 1.6E-09 61.2 9.3 53 25-77 53-106 (128)
27 3es4_A Uncharacterized protein 97.9 4E-05 1.4E-09 64.0 8.7 72 4-78 41-114 (116)
28 3fjs_A Uncharacterized protein 97.9 3.7E-05 1.3E-09 62.0 8.0 51 24-75 54-104 (114)
29 2pfw_A Cupin 2, conserved barr 97.9 4.3E-05 1.5E-09 60.2 8.3 52 25-77 53-104 (116)
30 2b8m_A Hypothetical protein MJ 97.9 9.5E-05 3.2E-09 58.7 10.3 55 22-77 44-100 (117)
31 2q30_A Uncharacterized protein 97.9 7.2E-05 2.5E-09 58.0 8.8 54 22-76 50-105 (110)
32 1lr5_A Auxin binding protein 1 97.8 0.00019 6.5E-09 60.7 11.2 59 20-79 56-125 (163)
33 2bnm_A Epoxidase; oxidoreducta 97.8 0.00014 4.9E-09 62.9 10.2 56 21-76 135-196 (198)
34 1y3t_A Hypothetical protein YX 97.7 0.00011 3.9E-09 68.2 9.9 59 20-78 61-119 (337)
35 3ibm_A Cupin 2, conserved barr 97.7 0.00019 6.7E-09 61.9 10.2 74 5-79 56-131 (167)
36 2cav_A Protein (canavalin); vi 97.7 1.6E-05 5.5E-10 79.5 3.6 199 23-245 103-354 (445)
37 1dgw_A Canavalin; duplicated s 97.7 8.4E-05 2.9E-09 64.9 7.7 54 23-76 58-117 (178)
38 3h8u_A Uncharacterized conserv 97.7 0.00014 4.8E-09 58.2 8.5 56 21-76 55-112 (125)
39 3qac_A 11S globulin SEED stora 97.7 6E-05 2.1E-09 76.0 7.6 47 198-245 330-386 (465)
40 1vj2_A Novel manganese-contain 97.7 0.00013 4.4E-09 59.3 8.2 55 25-79 67-122 (126)
41 3cew_A Uncharacterized cupin p 97.7 0.00022 7.4E-09 57.4 9.5 59 21-79 43-102 (125)
42 1vr3_A Acireductone dioxygenas 97.7 0.00011 3.7E-09 66.2 8.4 46 22-68 101-151 (191)
43 1juh_A Quercetin 2,3-dioxygena 97.7 0.00019 6.4E-09 69.0 10.6 57 22-78 268-325 (350)
44 2e9q_A 11S globulin subunit be 97.7 9.2E-05 3.2E-09 74.4 8.4 47 198-245 329-385 (459)
45 3ht1_A REMF protein; cupin fol 97.6 0.00013 4.3E-09 59.4 7.6 58 22-80 56-116 (145)
46 1o4t_A Putative oxalate decarb 97.6 0.00032 1.1E-08 57.6 10.0 55 22-76 74-129 (133)
47 1y3t_A Hypothetical protein YX 97.6 0.00028 9.5E-09 65.5 10.6 58 20-77 233-290 (337)
48 2vpv_A Protein MIF2, MIF2P; nu 97.6 0.00015 5.1E-09 63.9 8.3 57 22-78 106-163 (166)
49 1fxz_A Glycinin G1; proglycini 97.6 0.0001 3.6E-09 74.3 8.2 49 198-247 345-403 (476)
50 2xlg_A SLL1785 protein, CUCA; 97.6 0.00018 6.1E-09 66.4 8.7 55 19-73 57-132 (239)
51 1fi2_A Oxalate oxidase, germin 97.6 0.0004 1.4E-08 61.4 10.3 58 20-77 87-153 (201)
52 3rns_A Cupin 2 conserved barre 97.5 0.00031 1.1E-08 63.1 9.5 53 24-76 171-223 (227)
53 1x82_A Glucose-6-phosphate iso 97.5 0.00052 1.8E-08 60.4 10.3 57 22-78 90-154 (190)
54 2ozi_A Hypothetical protein RP 97.5 5.9E-05 2E-09 60.3 3.7 60 22-81 34-97 (98)
55 1juh_A Quercetin 2,3-dioxygena 97.5 0.00025 8.4E-09 68.2 8.6 58 20-77 65-127 (350)
56 3rns_A Cupin 2 conserved barre 97.5 0.00038 1.3E-08 62.5 9.4 54 24-78 55-108 (227)
57 1rc6_A Hypothetical protein YL 97.5 0.00068 2.3E-08 61.9 10.7 63 20-82 194-258 (261)
58 3myx_A Uncharacterized protein 97.5 0.00039 1.3E-08 64.5 9.1 70 5-76 167-237 (238)
59 2vqa_A SLL1358 protein, MNCA; 97.4 0.00046 1.6E-08 65.3 8.9 59 20-78 67-131 (361)
60 3kgz_A Cupin 2 conserved barre 97.4 0.00048 1.6E-08 59.1 8.0 56 25-80 63-119 (156)
61 3jzv_A Uncharacterized protein 97.3 0.00053 1.8E-08 59.5 8.0 58 22-80 70-128 (166)
62 2f4p_A Hypothetical protein TM 97.3 0.00084 2.9E-08 56.3 9.0 54 25-78 67-122 (147)
63 1sq4_A GLXB, glyoxylate-induce 97.3 0.00045 1.5E-08 64.4 8.0 56 24-79 88-144 (278)
64 1zrr_A E-2/E-2' protein; nicke 97.3 0.00014 4.8E-09 64.6 3.7 44 25-68 99-146 (179)
65 1sef_A Conserved hypothetical 97.3 0.0017 5.9E-08 59.8 10.9 64 21-85 199-264 (274)
66 1y9q_A Transcriptional regulat 97.2 0.00067 2.3E-08 58.5 7.1 53 23-76 123-176 (192)
67 4b29_A Dimethylsulfoniopropion 97.1 0.0012 4E-08 60.7 8.3 73 3-78 132-205 (217)
68 3lag_A Uncharacterized protein 97.1 0.00047 1.6E-08 54.6 4.8 61 20-80 32-96 (98)
69 2vqa_A SLL1358 protein, MNCA; 97.1 0.0023 7.8E-08 60.5 10.3 60 20-79 249-314 (361)
70 3es1_A Cupin 2, conserved barr 97.1 0.0012 4E-08 58.4 7.3 60 24-84 97-158 (172)
71 2arc_A ARAC, arabinose operon 97.1 0.0034 1.2E-07 51.4 9.7 57 24-80 36-94 (164)
72 1rc6_A Hypothetical protein YL 97.0 0.0011 3.8E-08 60.5 7.0 58 22-79 77-135 (261)
73 3h7j_A Bacilysin biosynthesis 97.0 0.001 3.6E-08 60.2 6.7 52 25-76 165-217 (243)
74 1j58_A YVRK protein; cupin, de 97.0 0.0029 9.9E-08 60.5 10.0 60 20-79 272-337 (385)
75 3h7j_A Bacilysin biosynthesis 97.0 0.0012 4.2E-08 59.7 7.0 52 25-76 53-106 (243)
76 1sfn_A Conserved hypothetical 97.0 0.00065 2.2E-08 61.9 5.2 53 26-79 68-120 (246)
77 3kgl_A Cruciferin; 11S SEED gl 96.9 0.00082 2.8E-08 67.8 5.7 47 198-245 330-386 (466)
78 1sef_A Conserved hypothetical 96.9 0.0015 5E-08 60.3 6.7 57 22-78 80-137 (274)
79 2d5f_A Glycinin A3B4 subunit; 96.9 0.0014 4.9E-08 66.3 7.1 58 20-77 382-445 (493)
80 1uij_A Beta subunit of beta co 96.9 0.0017 5.8E-08 64.2 7.4 72 4-78 50-125 (416)
81 1j58_A YVRK protein; cupin, de 96.8 0.0022 7.6E-08 61.3 7.7 53 20-73 94-151 (385)
82 2ea7_A 7S globulin-1; beta bar 96.7 0.003 1E-07 62.9 7.8 70 3-75 61-136 (434)
83 4e2q_A Ureidoglycine aminohydr 96.7 0.002 7E-08 60.5 6.2 57 22-79 86-143 (266)
84 1fxz_A Glycinin G1; proglycini 96.7 0.0058 2E-07 61.6 9.6 58 20-77 353-416 (476)
85 3bu7_A Gentisate 1,2-dioxygena 96.6 0.011 3.6E-07 58.5 10.6 70 6-78 297-368 (394)
86 3c3v_A Arachin ARAH3 isoform; 96.6 0.006 2.1E-07 62.1 9.0 73 3-77 372-450 (510)
87 2d40_A Z3393, putative gentisa 96.5 0.0076 2.6E-07 58.1 8.5 66 9-76 272-337 (354)
88 1sfn_A Conserved hypothetical 96.5 0.018 6.1E-07 52.3 10.6 78 2-81 164-242 (246)
89 2q1z_B Anti-sigma factor CHRR, 96.3 0.0096 3.3E-07 52.8 7.5 64 6-76 128-192 (195)
90 3fz3_A Prunin; TREE NUT allerg 96.3 0.006 2E-07 62.5 6.9 47 20-66 409-461 (531)
91 2d40_A Z3393, putative gentisa 96.3 0.0092 3.2E-07 57.5 7.8 56 21-77 116-173 (354)
92 1uij_A Beta subunit of beta co 96.2 0.012 4.2E-07 58.1 8.6 59 20-79 264-341 (416)
93 2o1q_A Putative acetyl/propion 96.2 0.0032 1.1E-07 53.1 3.7 66 7-75 48-115 (145)
94 3gbg_A TCP pilus virulence reg 96.1 0.016 5.5E-07 52.1 8.3 73 5-79 7-87 (276)
95 2phl_A Phaseolin; plant SEED s 96.1 0.015 5.3E-07 57.3 8.5 59 20-79 254-324 (397)
96 2ea7_A 7S globulin-1; beta bar 96.0 0.015 5.2E-07 57.8 8.3 60 19-79 280-357 (434)
97 3s7i_A Allergen ARA H 1, clone 96.0 0.011 3.7E-07 58.8 7.1 46 23-68 61-110 (418)
98 2e9q_A 11S globulin subunit be 96.0 0.011 3.7E-07 59.5 6.9 57 20-76 337-399 (459)
99 3ebr_A Uncharacterized RMLC-li 95.9 0.021 7.2E-07 49.3 7.6 67 5-76 44-113 (159)
100 3nw4_A Gentisate 1,2-dioxygena 95.9 0.04 1.4E-06 54.0 10.4 59 18-78 292-350 (368)
101 1sq4_A GLXB, glyoxylate-induce 95.7 0.045 1.5E-06 50.8 9.4 82 2-85 190-272 (278)
102 3kgl_A Cruciferin; 11S SEED gl 95.6 0.041 1.4E-06 55.5 9.5 58 20-77 338-401 (466)
103 4e2q_A Ureidoglycine aminohydr 95.5 0.058 2E-06 50.6 9.7 73 2-76 185-258 (266)
104 3ksc_A LEGA class, prolegumin; 95.5 0.054 1.8E-06 55.0 10.1 68 9-77 363-436 (496)
105 3bu7_A Gentisate 1,2-dioxygena 95.4 0.053 1.8E-06 53.5 9.5 59 5-66 125-184 (394)
106 3o14_A Anti-ecfsigma factor, C 95.3 0.037 1.3E-06 50.4 7.4 59 10-76 50-108 (223)
107 3nw4_A Gentisate 1,2-dioxygena 95.2 0.031 1.1E-06 54.8 6.9 68 5-75 105-174 (368)
108 3cjx_A Protein of unknown func 95.1 0.051 1.7E-06 47.3 7.3 56 9-68 49-104 (165)
109 2qnk_A 3-hydroxyanthranilate 3 95.1 0.059 2E-06 51.3 8.2 57 22-79 222-278 (286)
110 2phl_A Phaseolin; plant SEED s 95.0 0.034 1.2E-06 54.9 6.5 51 24-74 70-132 (397)
111 2d5f_A Glycinin A3B4 subunit; 94.8 0.069 2.4E-06 54.1 8.4 49 198-247 374-432 (493)
112 3ksc_A LEGA class, prolegumin; 94.7 0.086 2.9E-06 53.6 8.8 47 198-245 365-421 (496)
113 2y0o_A Probable D-lyxose ketol 94.6 0.051 1.7E-06 48.2 6.0 53 26-80 80-153 (175)
114 3qac_A 11S globulin SEED stora 94.6 0.08 2.7E-06 53.4 8.1 53 13-66 332-390 (465)
115 3c3v_A Arachin ARAH3 isoform; 94.5 0.097 3.3E-06 53.3 8.7 49 198-247 379-437 (510)
116 2cav_A Protein (canavalin); vi 94.0 0.15 5E-06 50.9 8.6 57 20-77 296-368 (445)
117 2qdr_A Uncharacterized protein 93.6 0.28 9.7E-06 46.5 9.2 54 21-81 108-164 (303)
118 3s7i_A Allergen ARA H 1, clone 93.2 0.24 8.2E-06 49.1 8.5 57 20-77 278-364 (418)
119 2qjv_A Uncharacterized IOLB-li 89.1 1.8 6.2E-05 40.7 9.5 78 5-86 29-117 (270)
120 2pa7_A DTDP-6-deoxy-3,4-keto-h 89.1 3.2 0.00011 35.2 10.2 70 10-81 40-114 (141)
121 3st7_A Capsular polysaccharide 89.0 0.68 2.3E-05 42.9 6.5 57 20-76 287-352 (369)
122 1pmi_A PMI, phosphomannose iso 88.5 1.6 5.6E-05 43.4 9.2 63 5-67 357-423 (440)
123 1qwr_A Mannose-6-phosphate iso 88.3 1.1 3.8E-05 42.5 7.5 58 5-65 251-309 (319)
124 3o14_A Anti-ecfsigma factor, C 88.2 0.44 1.5E-05 43.2 4.5 52 25-84 165-216 (223)
125 3kmh_A D-lyxose isomerase; cup 88.2 2.3 8E-05 39.5 9.4 70 5-80 139-208 (246)
126 3bb6_A Uncharacterized protein 86.6 1.4 4.9E-05 37.1 6.4 48 26-73 39-94 (127)
127 1zx5_A Mannosephosphate isomer 86.3 1.6 5.4E-05 41.2 7.3 56 5-65 230-287 (300)
128 2wfp_A Mannose-6-phosphate iso 85.7 1.9 6.4E-05 42.3 7.7 58 5-65 324-382 (394)
129 3dl3_A Tellurite resistance pr 85.6 2 6.8E-05 35.9 6.7 47 28-75 40-94 (119)
130 3bal_A Acetylacetone-cleaving 85.1 0.97 3.3E-05 39.1 4.8 50 24-73 64-115 (153)
131 1ywk_A 4-deoxy-L-threo-5-hexos 83.9 1.3 4.6E-05 42.0 5.5 62 24-86 77-141 (289)
132 1xru_A 4-deoxy-L-threo-5-hexos 83.7 1.6 5.5E-05 41.4 6.0 62 24-86 77-141 (282)
133 1yud_A Hypothetical protein SO 81.6 9.7 0.00033 33.4 9.8 72 5-79 50-133 (170)
134 2oyz_A UPF0345 protein VPA0057 79.2 8.2 0.00028 30.9 7.8 56 20-77 35-92 (94)
135 2gm6_A Cysteine dioxygenase ty 75.8 9.3 0.00032 34.0 8.1 58 24-81 97-167 (208)
136 3fz3_A Prunin; TREE NUT allerg 74.3 8 0.00028 39.6 8.1 47 198-245 401-457 (531)
137 3eqe_A Putative cystein deoxyg 73.1 15 0.00053 31.8 8.6 55 26-81 90-153 (171)
138 2vec_A YHAK, pirin-like protei 71.9 9.8 0.00034 35.1 7.4 50 28-78 204-254 (256)
139 1dgw_A Canavalin; duplicated s 70.9 1 3.4E-05 38.8 0.5 48 198-247 48-103 (178)
140 3hqx_A UPF0345 protein aciad03 69.3 24 0.00083 29.0 8.4 57 20-78 51-109 (111)
141 3bpz_A Potassium/sodium hyperp 67.2 5.4 0.00019 33.5 4.3 33 22-54 109-142 (202)
142 1tq5_A Protein YHHW; bicupin, 66.9 11 0.00038 34.4 6.6 47 28-79 183-229 (242)
143 4gjz_A Lysine-specific demethy 63.9 5.1 0.00017 34.3 3.6 24 45-68 202-225 (235)
144 2xdv_A MYC-induced nuclear ant 58.3 36 0.0012 33.7 9.0 63 5-68 139-223 (442)
145 1vp6_A CNBD, cyclic-nucleotide 56.1 11 0.00037 29.0 3.9 32 22-54 48-79 (138)
146 3hsh_A Endostatin, collagen al 55.4 1.7 5.9E-05 31.8 -0.8 52 7-58 5-56 (56)
147 3mdp_A Cyclic nucleotide-bindi 54.2 13 0.00046 28.4 4.2 33 22-54 43-84 (142)
148 1qwr_A Mannose-6-phosphate iso 54.2 10 0.00034 35.9 4.0 57 44-107 158-217 (319)
149 3eo6_A Protein of unknown func 54.0 29 0.00098 28.4 6.1 55 20-76 48-104 (106)
150 2ptm_A Hyperpolarization-activ 52.7 15 0.00052 30.5 4.5 33 22-54 108-142 (198)
151 2p17_A Pirin-like protein; GK1 52.2 37 0.0013 31.4 7.5 52 24-79 186-243 (277)
152 4f8a_A Potassium voltage-gated 51.0 21 0.00072 27.9 4.9 34 22-55 64-98 (160)
153 1dgw_Y Canavalin; duplicated s 50.1 21 0.0007 28.3 4.6 33 47-80 9-41 (93)
154 1vrb_A Putative asparaginyl hy 49.4 12 0.0004 35.6 3.7 23 45-67 219-241 (342)
155 2d93_A RAP guanine nucleotide 48.8 9.1 0.00031 29.6 2.4 32 23-54 55-87 (134)
156 3ocp_A PRKG1 protein; serine/t 47.9 29 0.001 26.7 5.2 32 22-54 60-93 (139)
157 1ft9_A Carbon monoxide oxidati 47.8 49 0.0017 27.7 7.0 53 23-78 38-95 (222)
158 3pna_A CAMP-dependent protein 47.3 28 0.00094 27.5 5.1 33 22-54 75-108 (154)
159 3eln_A Cysteine dioxygenase ty 46.4 81 0.0028 27.8 8.4 55 26-80 91-158 (200)
160 2fmy_A COOA, carbon monoxide o 45.3 75 0.0026 26.4 7.8 54 22-78 41-99 (220)
161 3ejk_A DTDP sugar isomerase; Y 43.3 96 0.0033 26.9 8.3 52 22-73 70-136 (174)
162 1zx5_A Mannosephosphate isomer 42.9 22 0.00076 33.3 4.4 47 44-108 158-205 (300)
163 1wgp_A Probable cyclic nucleot 41.9 9.9 0.00034 29.2 1.5 32 23-54 44-82 (137)
164 4diq_A Lysine-specific demethy 41.1 28 0.00094 35.3 5.0 63 5-68 164-252 (489)
165 2z69_A DNR protein; beta barre 41.1 32 0.0011 26.6 4.5 33 22-54 49-87 (154)
166 3idb_B CAMP-dependent protein 40.7 47 0.0016 26.2 5.5 33 22-54 75-112 (161)
167 3ukn_A Novel protein similar t 38.6 32 0.0011 28.8 4.4 32 23-54 113-145 (212)
168 3n3f_A Collagen alpha-1(XV) ch 37.7 3.4 0.00012 30.0 -1.6 51 7-57 3-53 (54)
169 3d8c_A Hypoxia-inducible facto 37.7 32 0.0011 32.6 4.7 24 45-68 262-285 (349)
170 3al5_A HTYW5, JMJC domain-cont 37.2 23 0.00078 33.4 3.6 23 45-67 241-263 (338)
171 1yll_A PA5104, conserved hypot 36.8 30 0.001 30.9 4.0 53 26-79 140-196 (200)
172 3dv8_A Transcriptional regulat 35.6 38 0.0013 28.0 4.4 33 22-54 40-78 (220)
173 3of1_A CAMP-dependent protein 34.6 49 0.0017 27.7 4.9 53 23-78 163-224 (246)
174 2oz6_A Virulence factor regula 34.2 42 0.0014 27.5 4.3 32 23-54 28-65 (207)
175 2wfp_A Mannose-6-phosphate iso 32.7 43 0.0015 32.6 4.7 30 45-80 241-270 (394)
176 2pqq_A Putative transcriptiona 31.6 59 0.002 24.7 4.6 32 23-54 43-80 (149)
177 3dn7_A Cyclic nucleotide bindi 31.6 58 0.002 26.4 4.8 56 23-79 45-112 (194)
178 4ev0_A Transcription regulator 31.4 63 0.0022 26.5 5.0 53 23-78 37-102 (216)
179 1j1l_A Pirin; beta sandwich, c 31.4 98 0.0034 28.8 6.8 56 24-79 188-244 (290)
180 3of1_A CAMP-dependent protein 31.3 41 0.0014 28.2 3.9 33 22-54 44-77 (246)
181 3ryk_A DTDP-4-dehydrorhamnose 30.4 1.3E+02 0.0045 26.8 7.2 52 25-76 93-158 (205)
182 1znp_A Hypothetical protein AT 30.4 1.4E+02 0.0048 25.7 7.1 71 5-79 41-124 (154)
183 2xlg_A SLL1785 protein, CUCA; 30.0 19 0.00064 32.7 1.6 49 199-248 51-123 (239)
184 2bnm_A Epoxidase; oxidoreducta 28.9 83 0.0028 26.2 5.4 34 214-247 141-182 (198)
185 3fx3_A Cyclic nucleotide-bindi 28.9 74 0.0025 26.7 5.1 32 23-54 49-86 (237)
186 1zvf_A 3-hydroxyanthranilate 3 28.6 23 0.0008 31.3 1.9 99 150-281 7-117 (176)
187 3ibm_A Cupin 2, conserved barr 28.6 1E+02 0.0035 25.7 5.9 47 199-247 64-114 (167)
188 3b02_A Transcriptional regulat 27.4 61 0.0021 26.5 4.2 32 23-54 14-51 (195)
189 2qcs_B CAMP-dependent protein 27.2 71 0.0024 27.8 4.8 20 22-41 76-95 (291)
190 2gau_A Transcriptional regulat 27.0 75 0.0026 26.6 4.8 32 23-54 48-85 (232)
191 1zyb_A Transcription regulator 26.5 69 0.0024 27.1 4.5 32 23-54 58-95 (232)
192 1y9q_A Transcriptional regulat 26.4 68 0.0023 26.7 4.4 40 208-247 121-164 (192)
193 3uss_A Putative uncharacterize 26.3 2E+02 0.007 25.5 7.7 60 22-81 89-161 (211)
194 3iwz_A CAP-like, catabolite ac 26.0 66 0.0023 26.7 4.2 32 23-54 49-86 (230)
195 2l3a_A Uncharacterized protein 25.3 24 0.00083 27.6 1.2 20 137-158 29-48 (82)
196 3shr_A CGMP-dependent protein 25.1 69 0.0024 28.1 4.4 20 22-41 76-95 (299)
197 3cnk_A Filamin-A; FLNA24, X-RA 25.0 49 0.0017 24.7 2.9 23 113-139 64-86 (89)
198 2q1z_B Anti-sigma factor CHRR, 24.9 73 0.0025 27.6 4.4 48 199-248 133-180 (195)
199 3kgz_A Cupin 2 conserved barre 24.7 1E+02 0.0035 25.6 5.2 39 209-247 60-102 (156)
200 3loi_A Putative uncharacterize 24.4 1.6E+02 0.0054 25.7 6.4 60 5-66 54-126 (172)
201 3k2o_A Bifunctional arginine d 24.3 53 0.0018 31.2 3.6 24 45-68 257-280 (336)
202 2qcs_B CAMP-dependent protein 24.0 80 0.0027 27.4 4.5 20 22-41 194-213 (291)
203 3jqo_A TRAF protein; helical o 23.9 41 0.0014 30.8 2.6 51 50-103 78-143 (227)
204 3d0s_A Transcriptional regulat 23.8 1.1E+02 0.0038 25.3 5.3 32 23-54 44-81 (227)
205 3ryp_A Catabolite gene activat 23.6 1.2E+02 0.0041 24.7 5.3 32 23-54 34-71 (210)
206 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 23.2 3.2E+02 0.011 23.6 8.3 50 24-73 69-131 (185)
207 1dgw_X Canavalin; duplicated s 22.9 99 0.0034 23.3 4.3 23 20-42 51-73 (79)
208 1pmi_A PMI, phosphomannose iso 22.4 83 0.0028 31.1 4.7 29 45-79 267-295 (440)
209 3h8u_A Uncharacterized conserv 22.1 63 0.0022 24.7 3.1 48 200-248 48-100 (125)
210 1o5l_A Transcriptional regulat 22.0 78 0.0027 26.3 3.9 32 23-54 37-74 (213)
211 3kcc_A Catabolite gene activat 21.6 1.2E+02 0.0042 26.1 5.3 32 23-54 84-121 (260)
212 3jzv_A Uncharacterized protein 21.4 78 0.0027 26.7 3.8 45 201-247 63-111 (166)
213 1wlt_A 176AA long hypothetical 21.3 2.8E+02 0.0097 24.4 7.6 47 26-72 89-148 (196)
214 3gyd_A CNMP-BD protein, cyclic 21.3 1.3E+02 0.0044 24.7 5.1 33 22-54 76-114 (187)
215 3e97_A Transcriptional regulat 21.0 80 0.0027 26.4 3.8 33 22-54 43-81 (231)
216 3esg_A HUTD, putative uncharac 20.9 42 0.0014 29.9 2.0 48 26-79 142-190 (193)
217 2ixk_A DTDP-4-dehydrorhamnose 20.8 4E+02 0.014 23.0 8.4 51 24-74 70-133 (184)
218 3shr_A CGMP-dependent protein 20.7 99 0.0034 27.1 4.5 32 23-54 195-233 (299)
219 2bgc_A PRFA; bacterial infecti 20.6 1E+02 0.0035 26.0 4.5 19 23-41 33-51 (238)
220 1v05_A Filamin C; actin-bindin 20.6 67 0.0023 24.3 2.9 23 113-139 71-93 (96)
221 3la7_A Global nitrogen regulat 20.3 97 0.0033 26.4 4.3 32 23-54 58-95 (243)
222 3e6c_C CPRK, cyclic nucleotide 20.3 1E+02 0.0034 26.3 4.3 19 23-41 47-65 (250)
223 3aqy_A Beta-1,3-glucan-binding 20.1 1.2E+02 0.0041 24.3 4.5 46 4-54 29-75 (106)
No 1
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=100.00 E-value=1.6e-124 Score=935.49 Aligned_cols=304 Identities=59% Similarity=1.100 Sum_probs=277.2
Q ss_pred EEEEEEeeCCCCCCCceecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCCCCeEEEEEeecCCcee
Q 019943 5 FTCNRYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQ 84 (333)
Q Consensus 5 ~ai~~y~~~~sM~~~~~~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~~g~~~~ 84 (333)
+|||+|+||+||.+++|+|+|||||||||+|+|+|+||+|.|+|+|||||||||||+|||++.+ ++|+||||++|+||+
T Consensus 157 ~aI~~y~~n~sM~~~~f~NaDGD~Livpq~G~l~i~TEfG~L~v~pgei~VIPRGi~frv~l~~-p~Rgyi~E~~g~~f~ 235 (471)
T 1eyb_A 157 LAIHIFLCNTSMENRCFYNSDGDFLIVPQKGNLLIYTEFGKMLVQPNEICVIQRGMRFSIDVFE-ETRGYILEVYGVHFE 235 (471)
T ss_dssp EEEEEEEECSCCCSEEEEESSEEEEEEEEESCEEEEETTEEEEECTTEEEEECTTCCEEEECSS-SEEEEEEEEESCCEE
T ss_pred eEEEEEeCCCCcccceeecCCCCEEEEEEeCCEEEEEecccEEeccCCEEEECCccEEEEeeCC-CceEEEEEccCCccc
Confidence 6999999999998899999999999999999999999999999999999999999999999977 999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCccCCccccccCcccc--EEEEEEECCceEEEEcCCCCCeEeeecCCccceEeccCCceecccc
Q 019943 85 LPDLGPIGANGLAAPRDFLVPTAWFEEGSRLG--YTIVQKFGGELFTARQDFSPFNVVAWHGNYVPYKYDLSKFCPFNTV 162 (333)
Q Consensus 85 lPe~GpiG~ngla~~RDf~~P~a~~e~~~~~~--~~vv~K~~g~l~~~~~~hsPfDVVgW~G~~~Pykynl~~F~pi~s~ 162 (333)
||||||||+|||||+|||++|+|+|+++++ + |+|++|++|++|+++|+||||||||||||||||||||+||+||||+
T Consensus 236 LP~lGpiGanglan~RDF~~PvA~~ed~~~-~~~~~vv~K~~G~l~~~~~~hsPfDVVaWhGn~~PYkydl~~F~pI~sv 314 (471)
T 1eyb_A 236 LPDLGPIGANGLANPRDFLIPIAWYEDRQV-PGGYTVINKYQGKLFAAKQDVSPFNVVAWHGNYTPYKYNLKNFMVINSV 314 (471)
T ss_dssp CCCCGGGTTSCBSCGGGEEEECCCCCCCEE-EEEEEEEEEETTEEEEEEEEECSCCEEEEEESCCCEEEEGGGCBCCCCS
T ss_pred cccccccccCCccChhhccCccccccccCC-CccEEEEEEeCCeeEEEecCCCCceEEeEcCcccCeEechHHccccccc
Confidence 999999999999999999999999998754 6 9999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCcceEEeecCCCCCceeeeEEEeCCccccCCCCCCCCCCCCCCccceeEEeecccccccCCcCCCeeeeecCC
Q 019943 163 LVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCM 242 (333)
Q Consensus 163 ~~dH~dPsi~tvlta~s~~~g~~~~dFviF~PRw~~~~~t~rpPyyHrN~dsE~m~~i~G~y~a~~~g~~pG~~SlHp~g 242 (333)
++||+||||||||||||++||+||||||||+|||+++|+||||||||||+||||||||+|+|+||++||+|||+||||+|
T Consensus 315 s~dH~dPSIftVltaps~~pg~av~dFViFpPRw~v~e~TfrpPyyHrNv~SEfmgli~G~y~ak~~Gf~pGg~SLH~~~ 394 (471)
T 1eyb_A 315 AFDHADPSIFTVLTAKSVRPGVAIADFVIFPPRWGVADKTFRPPYYHRNCMSEFMGLIRGHYEAKQGGFLPGGGSLHSTM 394 (471)
T ss_dssp SSSCCCGGGGEEEEEECSSTTCEEEEEEEECSEEECCSSSCCSCCCBCCSCEEEEEECCC--------CCTTCEEEECTT
T ss_pred ccccCCCCcceEEEccCCCCCceEEeEeecCCccCCCCCccCCCCCccchhhhhhhhccccccccccCcCCCceeccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999889999999999999
Q ss_pred CCCCCChhHHHHHHhcCCCCCCceeec-ceEEEEeeccCcccchhhhcCC-CCCchhhhchhhhhcCCCCCc
Q 019943 243 TPHGPDTKTYEATIARGSEAGPYKITD-TMAFMFESCLIPRICPWALESP-FMDHDYYRCWIGLRSHFSYEE 312 (333)
Q Consensus 243 ~pHGP~~~~~e~a~~~~~~~~P~~~~~-~lAfM~eT~~~l~~t~~A~~~~-~~~~~Y~~~W~~~~~~f~~~~ 312 (333)
+|||||+++||+|+++ +|+|+|+++ ||||||||++||++|+||++++ .+|++|++||++|+++|++..
T Consensus 395 ~pHGPd~~~~E~a~~~--~l~p~k~~d~~lAfMfET~~pl~~T~~Al~~~~~~d~~Y~~~W~~l~~~f~~~~ 464 (471)
T 1eyb_A 395 TPHGPDADCFEKASKV--KLAPERIADGTMAFMFESSLSLAVTKWGLKASRCLDENYHKCWEPLKSHFTPNS 464 (471)
T ss_dssp CCBCCCHHHHHHHHHS--CCCCEEESTTCCEEEEEESSCCEECHHHHHHCC------------CCCCCCTTC
T ss_pred cCCCCChhhhHHhhcc--ccCceecCCceEEEEEEccccccccHHHHhCccccCccHHHhhhhhhccCCCCC
Confidence 9999999999999999 999999976 9999999999999999999976 689999999999999999744
No 2
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=99.29 E-value=8.6e-12 Score=107.67 Aligned_cols=77 Identities=9% Similarity=0.088 Sum_probs=67.0
Q ss_pred eEEEEEEeeCCCCC--CCceecCCCCEEEEEEeCeEEEEEe--------cceEEecCCeEEEECCccEEEeeCCCCCeEE
Q 019943 4 LFTCNRYTANKSMD--NCAFCNADGDFLVVPQKGRLWIATE--------CGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 73 (333)
Q Consensus 4 ~~ai~~y~~~~sM~--~~~~~n~DgDeL~~v~~G~l~l~te--------~G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~ 73 (333)
++||.-|..+.+.+ +..=+|.+.||+|++++|+++|+++ +|.+.++|||++|||||+.|++.+ ++++++
T Consensus 26 ~Va~~n~~~~~~~~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a-~~e~~v 104 (140)
T 3d0j_A 26 LVCIKNWKPDNDIEGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSIT-QKDTKM 104 (140)
T ss_dssp EEEEEECCGGGBTTTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEE-CTTCEE
T ss_pred EEEEEeccCcCCcccCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccC-CCceEE
Confidence 56777777776554 3466899999999999999999999 668999999999999999999998 679999
Q ss_pred EEEeecCC
Q 019943 74 YIAEIFGT 81 (333)
Q Consensus 74 ~iiE~~g~ 81 (333)
+|||+.+.
T Consensus 105 LLiEp~nT 112 (140)
T 3d0j_A 105 MYVQDSNC 112 (140)
T ss_dssp EEEEESCC
T ss_pred EEEEeCCC
Confidence 99999843
No 3
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.77 E-value=2.3e-08 Score=89.14 Aligned_cols=62 Identities=16% Similarity=0.289 Sum_probs=54.5
Q ss_pred ceecCCCCEEEEEEeCeEEEEEec-c---eEEecCCeEEEECCccEEEeeCCCCCeEEEEEeecCC
Q 019943 20 AFCNADGDFLVVPQKGRLWIATEC-G---KLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGT 81 (333)
Q Consensus 20 ~~~n~DgDeL~~v~~G~l~l~te~-G---~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~~g~ 81 (333)
-|-+.++||+|++++|++.|+++. | .+.+++||++++|+|+.|++...+.++.+||||..+.
T Consensus 49 d~H~h~~dE~FyvlkG~m~i~v~d~g~~~~v~l~eGE~f~lP~gvpH~P~r~~~e~~~lviE~~r~ 114 (174)
T 1yfu_A 49 DYHDDPLEEFFYQLRGNAYLNLWVDGRRERADLKEGDIFLLPPHVRHSPQRPEAGSACLVIERQRP 114 (174)
T ss_dssp CEEECSSCEEEEEEESCEEEEEEETTEEEEEEECTTCEEEECTTCCEEEEBCCTTCEEEEEEECCC
T ss_pred cCcCCCCceEEEEEeeEEEEEEEcCCceeeEEECCCCEEEeCCCCCcCccccCCCCEEEEEEeCCC
Confidence 345669999999999999999988 5 8999999999999999999977334899999999743
No 4
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=98.62 E-value=8.2e-08 Score=91.20 Aligned_cols=60 Identities=17% Similarity=0.233 Sum_probs=55.5
Q ss_pred CceecCCCCEEEEEEeCeEEEEEec-c---eEEecCCeEEEECCccEEEeeCCCCCeEEEEEeec
Q 019943 19 CAFCNADGDFLVVPQKGRLWIATEC-G---KLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIF 79 (333)
Q Consensus 19 ~~~~n~DgDeL~~v~~G~l~l~te~-G---~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~~ 79 (333)
.-|.+.++||+|++++|.++|+.+. | .+.+++||+.|+|+|+.|++.. ..++.++|||..
T Consensus 44 ~d~H~~~~dE~FyqlkG~m~l~~~d~g~~~~V~i~eGemfllP~gv~HsP~r-~~et~gLviE~~ 107 (286)
T 2qnk_A 44 KDYHIEEGEEVFYQLEGDMVLRVLEQGKHRDVVIRQGEIFLLPARVPHSPQR-FANTVGLVVERR 107 (286)
T ss_dssp CCEEECSSCEEEEEEESCEEEEEEETTEEEEEEECTTEEEEECTTCCEEEEE-CTTCEEEEEEEC
T ss_pred ccCcCCCCCeEEEEEeCeEEEEEEeCCceeeEEECCCeEEEeCCCCCcCCcc-cCCeEEEEEeec
Confidence 4566999999999999999999998 8 8999999999999999999987 568999999986
No 5
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.53 E-value=2.5e-07 Score=82.52 Aligned_cols=59 Identities=12% Similarity=0.115 Sum_probs=54.0
Q ss_pred ceecCCCCEEEEEEeCeEEEEEec-c-------eEEecCCeEEEECCccEEEeeCCCCCeEEEEEeec
Q 019943 20 AFCNADGDFLVVPQKGRLWIATEC-G-------KLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIF 79 (333)
Q Consensus 20 ~~~n~DgDeL~~v~~G~l~l~te~-G-------~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~~ 79 (333)
-|-+.+.||+|++++|++.|++++ | .+.+++||+.++|+|+.|++.. ..++.+||||..
T Consensus 48 D~H~~~~eE~Fy~lkG~m~l~v~d~g~~~~~~~dv~i~eGdmfllP~gvpHsP~r-~~e~v~lviErk 114 (176)
T 1zvf_A 48 DYHINPTPEWFYQKKGSMLLKVVDETDAEPKFIDIIINEGDSYLLPGNVPHSPVR-FADTVGIVVEQD 114 (176)
T ss_dssp CEEECSSCEEEEEEESCEEEEEEECSSSSCEEEEEEECTTEEEEECTTCCEEEEE-CTTCEEEEEEEC
T ss_pred cCcCCCCceEEEEEeCEEEEEEEcCCCcccceeeEEECCCCEEEcCCCCCcCCcc-cCCcEEEEEEec
Confidence 456899999999999999999988 6 7999999999999999999976 468999999987
No 6
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=98.42 E-value=5.4e-07 Score=74.33 Aligned_cols=72 Identities=17% Similarity=0.180 Sum_probs=56.2
Q ss_pred EEEEEEeeCCCCCCCceecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCCCCeEEEEEee
Q 019943 5 FTCNRYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEI 78 (333)
Q Consensus 5 ~ai~~y~~~~sM~~~~~~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~ 78 (333)
+++.++++..-- ..-.|.+.||+++|++|+++|+.+.....+++||.++||+|+.|++...+++++.+.+=.
T Consensus 40 ~~~~~~~~~pG~--~~~~H~~~~E~~~Vl~G~~~~~~~g~~~~l~~GD~v~ip~g~~H~~~~~~~~~~~l~v~~ 111 (119)
T 3lwc_A 40 ITIGYGRYAPGQ--SLTETMAVDDVMIVLEGRLSVSTDGETVTAGPGEIVYMPKGETVTIRSHEEGALTAYVTY 111 (119)
T ss_dssp CEEEEEEECTTC--EEEEECSSEEEEEEEEEEEEEEETTEEEEECTTCEEEECTTCEEEEEEEEEEEEEEEEEE
T ss_pred EEEEEEEECCCC--CcCccCCCCEEEEEEeCEEEEEECCEEEEECCCCEEEECCCCEEEEEcCCCCeEEEEEEC
Confidence 445566655432 233566999999999999999998778999999999999999999986545677666543
No 7
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=98.35 E-value=1.7e-06 Score=69.90 Aligned_cols=50 Identities=24% Similarity=0.310 Sum_probs=45.8
Q ss_pred ceecCCCCEEEEEEeCeEEEEEecce--EEecCCeEEEECCccEEEeeCCCC
Q 019943 20 AFCNADGDFLVVPQKGRLWIATECGK--LEVSPGEIAVLPQGFRFAVSLPDG 69 (333)
Q Consensus 20 ~~~n~DgDeL~~v~~G~l~l~te~G~--l~v~pGd~~VIPRG~~~Rv~~~~~ 69 (333)
.+++.+++|+++|++|++.|+.+.+. ..+++||.++||+|+.||+..++.
T Consensus 47 ~~~~~~~~E~~~Vl~G~~~l~~~~~~~~~~l~~Gd~i~ipa~~~H~~~n~~~ 98 (112)
T 2opk_A 47 FWYDSPQDEWVMVVSGSAGIECEGDTAPRVMRPGDWLHVPAHCRHRVAWTDG 98 (112)
T ss_dssp CCBCCSSEEEEEEEESCEEEEETTCSSCEEECTTEEEEECTTCCEEEEEECS
T ss_pred ccccCCccEEEEEEeCeEEEEECCEEEEEEECCCCEEEECCCCcEEEEeCCC
Confidence 45788999999999999999999999 999999999999999999986543
No 8
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=98.32 E-value=6.3e-07 Score=70.58 Aligned_cols=60 Identities=15% Similarity=0.252 Sum_probs=50.5
Q ss_pred eecCCCCEEEEEEeCeEEEEEec-ceEEecCCeEEEECCccEEEeeCCCCCeEEEEEeecCC
Q 019943 21 FCNADGDFLVVPQKGRLWIATEC-GKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGT 81 (333)
Q Consensus 21 ~~n~DgDeL~~v~~G~l~l~te~-G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~~g~ 81 (333)
-+|...+|+++|++|++.+.++. +...+++||.++||+|+.|++.. .++++.+++|+.+.
T Consensus 43 H~H~~~~E~~~Vl~G~~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~-~~~~~~l~i~~~~~ 103 (107)
T 2i45_A 43 HTHGYSDKVLFAVEGDMAVDFADGGSMTIREGEMAVVPKSVSHRPRS-ENGCSLVLIELSDP 103 (107)
T ss_dssp BCC--CCEEEEESSSCEEEEETTSCEEEECTTEEEEECTTCCEEEEE-EEEEEEEEEECC--
T ss_pred eeCCCCCEEEEEEeCEEEEEECCCcEEEECCCCEEEECCCCcEeeEe-CCCeEEEEEECCCc
Confidence 35544599999999999999999 89999999999999999999987 45789999997654
No 9
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=98.30 E-value=1.2e-06 Score=67.39 Aligned_cols=56 Identities=25% Similarity=0.303 Sum_probs=50.5
Q ss_pred ecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCCCCeEEEEEee
Q 019943 22 CNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEI 78 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~ 78 (333)
+|.+.+|++++++|++.+..+.....+++||.++||+|+.|++... ++++.+++|+
T Consensus 46 ~H~~~~e~~~v~~G~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~-~~~~~l~i~~ 101 (102)
T 3d82_A 46 EHADTDEVFIVMEGTLQIAFRDQNITLQAGEMYVIPKGVEHKPMAK-EECKIMIIEP 101 (102)
T ss_dssp CCTTCCEEEEEEESEEEEECSSCEEEEETTEEEEECTTCCBEEEEE-EEEEEEEEEE
T ss_pred eCCCCcEEEEEEeCEEEEEECCEEEEEcCCCEEEECCCCeEeeEcC-CCCEEEEEEc
Confidence 5555699999999999999999999999999999999999999874 5889999886
No 10
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=98.24 E-value=6.7e-06 Score=62.57 Aligned_cols=58 Identities=16% Similarity=0.206 Sum_probs=48.6
Q ss_pred eecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCC-CCeEEEEEee
Q 019943 21 FCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPD-GPSRGYIAEI 78 (333)
Q Consensus 21 ~~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~-~~~r~~iiE~ 78 (333)
-+|...+|++++++|++.+..+.....+++||.++||.|+.|++...+ .+++.+.+-.
T Consensus 44 H~H~~~~e~~~v~~G~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~~v~~ 102 (105)
T 1v70_A 44 HVHEGSDKVYYALEGEVVVRVGEEEALLAPGMAAFAPAGAPHGVRNESASPALLLVVTA 102 (105)
T ss_dssp ECCSSCEEEEEEEESCEEEEETTEEEEECTTCEEEECTTSCEEEECCSSSCEEEEEEEE
T ss_pred cCCCCCcEEEEEEeCEEEEEECCEEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEeC
Confidence 345556899999999999999999999999999999999999998643 4677766643
No 11
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=98.21 E-value=4.9e-06 Score=72.96 Aligned_cols=71 Identities=8% Similarity=-0.014 Sum_probs=58.8
Q ss_pred eeEEEEEEeeCCCCCCCceecCCCCEEEEEEe--CeEEEEEecceEEecCCeEEEECCccEEEeeCCCCCeEEEEEee
Q 019943 3 MLFTCNRYTANKSMDNCAFCNADGDFLVVPQK--GRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEI 78 (333)
Q Consensus 3 ~~~ai~~y~~~~sM~~~~~~n~DgDeL~~v~~--G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~ 78 (333)
+-+++|+........ .=+|...+|+|+|++ |++.++.+.....|++||.++||+|++||+. ++++.+.+-+
T Consensus 45 fp~sv~~v~~g~~~~--~H~H~~~~E~~yVLe~~G~g~v~idge~~~l~~GD~v~IPpg~~H~i~---g~l~~L~I~~ 117 (157)
T 4h7l_A 45 TSVSVHYTQITKAAR--THYHREHQEIYVVLDHAAHATIELNGQSYPLTKLLAISIPPLVRHRIV---GEATIINIVS 117 (157)
T ss_dssp CSCEEEEEEECSCCC--CBBCSSCEEEEEEEEECTTCEEEETTEEEECCTTEEEEECTTCCEEEE---SCEEEEEEEE
T ss_pred CcEEEEEEeCCCCcc--ceECCCCcEEEEEEecCcEEEEEECCEEEEeCCCCEEEECCCCeEeeE---CCEEEEEEEC
Confidence 446777777776543 556778899999999 9999999999999999999999999999996 3677776654
No 12
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=98.19 E-value=2.3e-05 Score=66.19 Aligned_cols=84 Identities=10% Similarity=0.034 Sum_probs=61.1
Q ss_pred EEEEEeeCCCC-CCCceecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCc-cEEEeeCC-CCCeEEEEEeecCCc
Q 019943 6 TCNRYTANKSM-DNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQG-FRFAVSLP-DGPSRGYIAEIFGTH 82 (333)
Q Consensus 6 ai~~y~~~~sM-~~~~~~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG-~~~Rv~~~-~~~~r~~iiE~~g~~ 82 (333)
.+++......- ....-+|.+++|+++|++|++.+..+.....+++||.++||.| +.|++... +.+++.+.+-.....
T Consensus 47 ~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~~~~~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~l~v~~p~~~ 126 (162)
T 3l2h_A 47 GIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTMENDQYPIAPGDFVGFPCHAAAHSISNDGTETLVCLVIGQRLDQ 126 (162)
T ss_dssp EEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEETTEEEEECTTCEEEECTTSCCEEEECCSSSCEEEEEEEECCSE
T ss_pred EEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEECCEEEEeCCCCEEEECCCCceEEeEeCCCCCEEEEEEECCCCC
Confidence 44444444332 1234567789999999999999999999999999999999997 99999764 346777777655322
Q ss_pred --eecCCCC
Q 019943 83 --FQLPDLG 89 (333)
Q Consensus 83 --~~lPe~G 89 (333)
...|+.+
T Consensus 127 ~~~~~pd~~ 135 (162)
T 3l2h_A 127 DVVDYPNQH 135 (162)
T ss_dssp EEEEETTTT
T ss_pred CeEecCCCC
Confidence 4455544
No 13
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=98.19 E-value=2.4e-06 Score=74.22 Aligned_cols=68 Identities=21% Similarity=0.257 Sum_probs=54.5
Q ss_pred EEEEEEeeCCCCCCCceecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCCCCeEEEEE
Q 019943 5 FTCNRYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIA 76 (333)
Q Consensus 5 ~ai~~y~~~~sM~~~~~~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~ii 76 (333)
+++.++++. . ..+-++.+.||+++|++|++.|+.+.....+++||.++||+|++|++..+ ++++.+.+
T Consensus 66 ~s~g~~~~e-~--~~~~~~~~~eE~~yVLeG~~~l~i~g~~~~l~~GD~i~iP~G~~h~~~n~-~~a~~l~V 133 (151)
T 4axo_A 66 LGCGMMEMK-E--TTFDWTLNYDEIDYVIDGTLDIIIDGRKVSASSGELIFIPKGSKIQFSVP-DYARFIYV 133 (151)
T ss_dssp CEEEEEEEE-E--EEEEEECSSEEEEEEEEEEEEEEETTEEEEEETTCEEEECTTCEEEEEEE-EEEEEEEE
T ss_pred EEEEEEEEc-C--ccccEeCCCcEEEEEEEeEEEEEECCEEEEEcCCCEEEECCCCEEEEEeC-CCEEEEEE
Confidence 456666665 2 23456789999999999999999877789999999999999999999875 46665554
No 14
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=98.18 E-value=7.6e-06 Score=66.68 Aligned_cols=55 Identities=18% Similarity=0.108 Sum_probs=47.6
Q ss_pred ceecCCCCEEEEEEeCeEEEEEec-ceEEecCCeEEEECCccEEEeeCCCCCeEEE
Q 019943 20 AFCNADGDFLVVPQKGRLWIATEC-GKLEVSPGEIAVLPQGFRFAVSLPDGPSRGY 74 (333)
Q Consensus 20 ~~~n~DgDeL~~v~~G~l~l~te~-G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~ 74 (333)
.-+|...+|+++|++|++.+..+. ....+++||.++||+|+.|++...+++++.+
T Consensus 58 ~H~H~~~~E~~~vl~G~~~~~~~~~~~~~l~~Gd~~~ip~g~~H~~~~~~~~~~~l 113 (134)
T 2o8q_A 58 WHTHTVGFQLFYVLRGWVEFEYEDIGAVMLEAGGSAFQPPGVRHRELRHSDDLEVL 113 (134)
T ss_dssp CEEECCSCEEEEEEESEEEEEETTTEEEEEETTCEEECCTTCCEEEEEECTTCEEE
T ss_pred CEECCCCcEEEEEEeCEEEEEECCcEEEEecCCCEEEECCCCcEEeEeCCCCeEEE
Confidence 446666699999999999999999 8899999999999999999998644466666
No 15
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=98.17 E-value=1.7e-05 Score=61.56 Aligned_cols=58 Identities=9% Similarity=0.017 Sum_probs=49.7
Q ss_pred ecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCC-CCeEEEEEeec
Q 019943 22 CNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPD-GPSRGYIAEIF 79 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~-~~~r~~iiE~~ 79 (333)
+|.+.+|+++|++|++.+..+.....+++||.++||.|+.|++...+ .+++.+.+-..
T Consensus 40 ~H~~~~e~~~vl~G~~~~~~~~~~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~v~~~ 98 (113)
T 2gu9_A 40 RHRGADQWLFVVDGAGEAIVDGHTQALQAGSLIAIERGQAHEIRNTGDTPLKTVNFYHP 98 (113)
T ss_dssp SSCCCEEEEEEEECCEEEEETTEEEEECTTEEEEECTTCCEEEECCSSSCEEEEEEEES
T ss_pred ccCCCcEEEEEEeCEEEEEECCEEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECC
Confidence 56668999999999999999999999999999999999999998643 46777776543
No 16
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=98.10 E-value=4.9e-05 Score=70.54 Aligned_cols=70 Identities=13% Similarity=0.118 Sum_probs=52.7
Q ss_pred EEEEEEeeCCCCCCCceecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCCCCeEEEEEee
Q 019943 5 FTCNRYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEI 78 (333)
Q Consensus 5 ~ai~~y~~~~sM~~~~~~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~ 78 (333)
+++.++.+..+ .....-..||+++|++|+++|+.....+++++||.+|||||++++++..+ ++|.+.+=.
T Consensus 47 ~~~G~~~~~g~---~~v~~~p~dE~~~VleG~~~lt~~g~~~~~~~Gd~~~ip~G~~~~w~~~~-~~~~~y~~~ 116 (238)
T 3myx_A 47 IAAGIVEFGTA---LSVEAYPYTEMLVMHRGSVTLTSGTDSVTLSTGESAVIGRGTQVRIDAQP-ESLWAFCAS 116 (238)
T ss_dssp EEEEEEEECSE---EEESSCSSEEEEEEEESEEEEEETTEEEEEETTCEEEECTTCCEEEEECT-TEEEEEEEE
T ss_pred eEEEEEEeccc---cccccCCCcEEEEEEEeEEEEECCCeEEEEcCCCEEEECCCCEEEEEecC-CeEEEEEec
Confidence 45566666222 23334556999999999999999767799999999999999999999855 555544433
No 17
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=98.08 E-value=1.7e-05 Score=61.70 Aligned_cols=61 Identities=21% Similarity=0.141 Sum_probs=51.4
Q ss_pred ceecCCCCEEEEEEeCeEEEEEecc--eEEecCCeEEEECCccEEEeeCC-CCCeEEEEEeecC
Q 019943 20 AFCNADGDFLVVPQKGRLWIATECG--KLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIAEIFG 80 (333)
Q Consensus 20 ~~~n~DgDeL~~v~~G~l~l~te~G--~l~v~pGd~~VIPRG~~~Rv~~~-~~~~r~~iiE~~g 80 (333)
.-+|...+|+++|++|+++++.+.| ...+++||.+.||.|+.|++.-. +.+++.+.+|..+
T Consensus 33 ~H~H~~~~e~~~Vl~G~~~~~~~~g~~~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l~v~~~~ 96 (97)
T 2fqp_A 33 WHRHSMDYVVVPMTTGPLLLETPEGSVTSQLTRGVSYTRPEGVEHNVINPSDTEFVFVEIEIKA 96 (97)
T ss_dssp SEECCSCEEEEESSCEEEEEEETTEEEEEEECTTCCEEECTTCEEEEECCSSSCEEEEEEEECC
T ss_pred CEECCCCcEEEEEeecEEEEEeCCCCEEEEEcCCCEEEeCCCCcccCEeCCCCcEEEEEEEEcc
Confidence 4566655679999999999999985 69999999999999999999754 4478999888753
No 18
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=98.04 E-value=2.1e-05 Score=63.12 Aligned_cols=52 Identities=15% Similarity=0.075 Sum_probs=45.7
Q ss_pred CCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCCCCeEEEEE
Q 019943 25 DGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIA 76 (333)
Q Consensus 25 DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~ii 76 (333)
+++|+++|++|++.+..+.....+++||.++||.|+.|++...+++++++.+
T Consensus 60 ~~~e~~~vl~G~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~l~v 111 (126)
T 4e2g_A 60 PHEQAGVMLEGTLELTIGEETRVLRPGMAYTIPGGVRHRARTFEDGCLVLDI 111 (126)
T ss_dssp SSEEEEEEEEECEEEEETTEEEEECTTEEEEECTTCCEEEECCTTCEEEEEE
T ss_pred CCceEEEEEEeEEEEEECCEEEEeCCCCEEEECCCCcEEeEECCCCEEEEEE
Confidence 3699999999999999999999999999999999999999875545666544
No 19
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=98.00 E-value=9.5e-06 Score=65.24 Aligned_cols=55 Identities=18% Similarity=0.279 Sum_probs=45.9
Q ss_pred ecCCCCEEEEEEeCeEEEEEe-cceEEecCCeEEEECCccEEEeeCCCCCeEEEEE
Q 019943 22 CNADGDFLVVPQKGRLWIATE-CGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIA 76 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~te-~G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~ii 76 (333)
.+.+++|+++|++|++.+..+ .....+++||.++||+|+.|++...+...+.|++
T Consensus 45 ~hH~~~E~~~Vl~G~~~~~i~~g~~~~l~~GD~i~ip~g~~H~~~n~~~~~~~yv~ 100 (101)
T 1o5u_A 45 WYYDTNETCYILEGKVEVTTEDGKKYVIEKGDLVTFPKGLRCRWKVLEPVRKHYNL 100 (101)
T ss_dssp EECSSCEEEEEEEEEEEEEETTCCEEEEETTCEEEECTTCEEEEEEEEEEEEEEEE
T ss_pred ccCCceEEEEEEeCEEEEEECCCCEEEECCCCEEEECCCCcEEEEeCCCeeEEEEE
Confidence 457799999999999999998 6679999999999999999998764434455554
No 20
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=97.99 E-value=4.8e-05 Score=63.63 Aligned_cols=58 Identities=17% Similarity=0.128 Sum_probs=48.8
Q ss_pred ceecCCCCEEEEEEeCeEEEEEecce------EEecCCeEEEECCccEEEeeCC-CCCeEEEEEe
Q 019943 20 AFCNADGDFLVVPQKGRLWIATECGK------LEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIAE 77 (333)
Q Consensus 20 ~~~n~DgDeL~~v~~G~l~l~te~G~------l~v~pGd~~VIPRG~~~Rv~~~-~~~~r~~iiE 77 (333)
.-+|.+.+|+++|++|++.+..+... ..+++||.++||.|+.|++... +.+++.+++-
T Consensus 58 ~H~H~~~~E~~~Vl~G~~~~~i~~~~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~l~i~ 122 (148)
T 2oa2_A 58 LEIHPHLDQFLRVEEGRGLVQMGHRQDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLYSIY 122 (148)
T ss_dssp CBCCTTCEEEEEEEESEEEEEEESBTTBCCEEEEEETTCEEEECTTCEEEEEECSSSCEEEEEEE
T ss_pred ceECCCCcEEEEEEeCEEEEEECCccccceeeEEECCCCEEEECCCCcEEEEECCCCCEEEEEEE
Confidence 34577788999999999999999988 9999999999999999999754 3456666653
No 21
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=97.97 E-value=5.4e-06 Score=69.10 Aligned_cols=70 Identities=13% Similarity=0.182 Sum_probs=52.7
Q ss_pred EEEEEEeeCCCCCCCceecCCC-CEEEEEEeCeEEEEEecce-EEecCCeEEEECCccEEEeeCCCCCeEEEEEe
Q 019943 5 FTCNRYTANKSMDNCAFCNADG-DFLVVPQKGRLWIATECGK-LEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAE 77 (333)
Q Consensus 5 ~ai~~y~~~~sM~~~~~~n~Dg-DeL~~v~~G~l~l~te~G~-l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE 77 (333)
+.+.+|.+...- .-.+.+. ||+++|++|++.|..+.|. +++++||.++||+|+.|+++..+...+.|++-
T Consensus 49 ~~~g~w~~~pG~---~~~~~~~~~E~~~Vl~G~~~l~~~~g~~~~l~~GD~~~ip~g~~h~~~~~~~~rK~yv~~ 120 (123)
T 3bcw_A 49 VESGVWESTSGS---FQSNTTGYIEYCHIIEGEARLVDPDGTVHAVKAGDAFIMPEGYTGRWEVDRHVKKIYFVT 120 (123)
T ss_dssp EEEEEEEEEEEE---EECCCTTEEEEEEEEEEEEEEECTTCCEEEEETTCEEEECTTCCCEEEEEEEEEEEEEEE
T ss_pred EEEEEEEECCCc---eeeEcCCCcEEEEEEEEEEEEEECCCeEEEECCCCEEEECCCCeEEEEECCceeEEEEEE
Confidence 345556655321 1124444 9999999999999996665 99999999999999999998755455777763
No 22
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=97.95 E-value=1.3e-05 Score=67.44 Aligned_cols=54 Identities=15% Similarity=0.215 Sum_probs=46.9
Q ss_pred ecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCCCCeEEEEE
Q 019943 22 CNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIA 76 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~ii 76 (333)
.|.++||+++|++|++.|..+.....+++||.++||+|+.|++.. ++++|.+.+
T Consensus 71 ~h~~~~E~~~VLeG~~~l~~~g~~~~l~~GD~i~~p~g~~h~~~~-~~~~~~l~v 124 (133)
T 2pyt_A 71 WTLNYDEIDMVLEGELHVRHEGETMIAKAGDVMFIPKGSSIEFGT-PTSVRFLYV 124 (133)
T ss_dssp EECSSEEEEEEEEEEEEEEETTEEEEEETTCEEEECTTCEEEEEE-EEEEEEEEE
T ss_pred ccCCCCEEEEEEECEEEEEECCEEEEECCCcEEEECCCCEEEEEe-CCCEEEEEE
Confidence 567899999999999999999778999999999999999999975 446666554
No 23
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=97.95 E-value=4.2e-05 Score=60.51 Aligned_cols=56 Identities=18% Similarity=0.231 Sum_probs=49.0
Q ss_pred cCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCCCCeEEEEEeec
Q 019943 23 NADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIF 79 (333)
Q Consensus 23 n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~~ 79 (333)
..+++|+++|++|++.+..+.....+++||.++||.|+.|++... ++++.+++-..
T Consensus 55 ~h~~~e~~~vl~G~~~~~i~~~~~~l~~Gd~i~i~~~~~H~~~~~-~~~~~~~i~~~ 110 (114)
T 2ozj_A 55 EYFGDTLYLILQGEAVITFDDQKIDLVPEDVLMVPAHKIHAIAGK-GRFKMLQITLI 110 (114)
T ss_dssp CCSSCEEEEEEEEEEEEEETTEEEEECTTCEEEECTTCCBEEEEE-EEEEEEEEEEC
T ss_pred ECCCCeEEEEEeCEEEEEECCEEEEecCCCEEEECCCCcEEEEeC-CCcEEEEEEEc
Confidence 347899999999999999999999999999999999999999864 46777777654
No 24
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=97.94 E-value=5.8e-05 Score=64.79 Aligned_cols=60 Identities=20% Similarity=0.318 Sum_probs=51.2
Q ss_pred ceecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCc--cEEEeeCC-CCCeEEEEEeec
Q 019943 20 AFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQG--FRFAVSLP-DGPSRGYIAEIF 79 (333)
Q Consensus 20 ~~~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG--~~~Rv~~~-~~~~r~~iiE~~ 79 (333)
.-+|...+|+++|++|++.++.+.....+++||.++||.| +.|++.-. +.+++.+++-..
T Consensus 59 ~H~H~~~eE~~~Vl~G~~~~~~~~~~~~l~~GD~i~ip~~~~~~H~~~n~~~~~~~~l~v~~p 121 (163)
T 3i7d_A 59 RHYHMEQDEFVMVTEGALVLVDDQGEHPMVPGDCAAFPAGDPNGHQFVNRTDAPATFLVVGTR 121 (163)
T ss_dssp SEEESSCCEEEEEEESCEEEEETTEEEEECTTCEEEECTTCCCCBEEECCSSSCEEEEEEEEC
T ss_pred CccCCCCcEEEEEEECEEEEEECCEEEEeCCCCEEEECCCCCcceEEEECCCCCEEEEEEECC
Confidence 5567777999999999999999999999999999999999 99999764 346777766554
No 25
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=97.94 E-value=6.1e-05 Score=59.25 Aligned_cols=55 Identities=20% Similarity=0.267 Sum_probs=48.3
Q ss_pred CCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCCCCeEEEEEeec
Q 019943 24 ADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIF 79 (333)
Q Consensus 24 ~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~~ 79 (333)
.+++|++++++|++.+..+.....+++||.++||.|+.|++...+ +++.+++-..
T Consensus 58 H~~~e~~~vl~G~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~-~~~~~~v~~~ 112 (115)
T 1yhf_A 58 SPGDAMVTILSGLAEITIDQETYRVAEGQTIVMPAGIPHALYAVE-AFQMLLVVVK 112 (115)
T ss_dssp CSSEEEEEEEESEEEEEETTEEEEEETTCEEEECTTSCEEEEESS-CEEEEEEEEC
T ss_pred CCCcEEEEEEeCEEEEEECCEEEEECCCCEEEECCCCCEEEEECC-CceEEEEEEc
Confidence 458999999999999999999999999999999999999998744 6887776543
No 26
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=97.93 E-value=4.6e-05 Score=61.22 Aligned_cols=53 Identities=15% Similarity=0.137 Sum_probs=46.5
Q ss_pred CCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCC-CCCeEEEEEe
Q 019943 25 DGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIAE 77 (333)
Q Consensus 25 DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~-~~~~r~~iiE 77 (333)
+..|++++++|++.+..+.....+++||+++||.|+.|++... +.+++.+++-
T Consensus 53 ~~~Ei~~v~~G~~~~~i~~~~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~i~ 106 (128)
T 4i4a_A 53 NEYELFIVIQGNAIIRINDEDFPVTKGDLIIIPLDSEHHVINNNQEDFHFYTIW 106 (128)
T ss_dssp SSEEEEEEEESEEEEEETTEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEE
T ss_pred CCeEEEEEEeCEEEEEECCEEEEECCCcEEEECCCCcEEeEeCCCCCEEEEEEE
Confidence 7899999999999999999999999999999999999999764 3456666654
No 27
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=97.91 E-value=4e-05 Score=63.97 Aligned_cols=72 Identities=10% Similarity=0.049 Sum_probs=55.8
Q ss_pred eEEEEEEeeCCCCCCCceecCCCC-EEEEEEeCeEEEEEecce-EEecCCeEEEECCccEEEeeCCCCCeEEEEEee
Q 019943 4 LFTCNRYTANKSMDNCAFCNADGD-FLVVPQKGRLWIATECGK-LEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEI 78 (333)
Q Consensus 4 ~~ai~~y~~~~sM~~~~~~n~DgD-eL~~v~~G~l~l~te~G~-l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~ 78 (333)
.+.+.+|.|...- +-.+.+.+ |++++++|+++|+.+.|. +++++||.+++|+|.+=+++..+.--+.|+|=+
T Consensus 41 ~~~~GvWe~tPG~---~~~~~~~~~E~~~iLeG~~~lt~ddG~~~~l~aGD~~~~P~G~~gtWev~e~vrK~~~~~~ 114 (116)
T 3es4_A 41 GTIVAVWMAEPGI---YNYAGRDLEETFVVVEGEALYSQADADPVKIGPGSIVSIAKGVPSRLEILSSFRKLATVIP 114 (116)
T ss_dssp CCEEEEEEECSEE---EEECCCSEEEEEEEEECCEEEEETTCCCEEECTTEEEEECTTCCEEEEECSCEEEEEEEEE
T ss_pred CEEEEEEecCCce---eECeeCCCcEEEEEEEeEEEEEeCCCeEEEECCCCEEEECCCCeEEEEEeEEEeEEEEEec
Confidence 3456677777652 22333545 999999999999999887 899999999999999999988664457777644
No 28
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=97.89 E-value=3.7e-05 Score=61.99 Aligned_cols=51 Identities=14% Similarity=0.164 Sum_probs=44.3
Q ss_pred CCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCCCCeEEEE
Q 019943 24 ADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYI 75 (333)
Q Consensus 24 ~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~i 75 (333)
..++|+++|++|++.+..+.....+++||.++||.|+.|++... ++++.++
T Consensus 54 H~~~e~~~Vl~G~~~~~i~~~~~~l~~Gd~i~ip~~~~H~~~~~-~~~~~~~ 104 (114)
T 3fjs_A 54 VAGPSTIQCLEGEVEIGVDGAQRRLHQGDLLYLGAGAAHDVNAI-TNTSLLV 104 (114)
T ss_dssp CSSCEEEEEEESCEEEEETTEEEEECTTEEEEECTTCCEEEEES-SSEEEEE
T ss_pred CCCcEEEEEEECEEEEEECCEEEEECCCCEEEECCCCcEEEEeC-CCcEEEE
Confidence 45689999999999999999999999999999999999999874 3555444
No 29
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=97.89 E-value=4.3e-05 Score=60.23 Aligned_cols=52 Identities=8% Similarity=0.018 Sum_probs=46.0
Q ss_pred CCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCCCCeEEEEEe
Q 019943 25 DGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAE 77 (333)
Q Consensus 25 DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE 77 (333)
+++|+++|++|++.+..+.....+++||.++||.|+.|++...+ +++.+.+=
T Consensus 53 ~~~e~~~vl~G~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~-~~~~l~v~ 104 (116)
T 2pfw_A 53 RHSQVSYVVEGEFHVNVDGVIKVLTAGDSFFVPPHVDHGAVCPT-GGILIDTF 104 (116)
T ss_dssp SSEEEEEEEEECEEEEETTEEEEECTTCEEEECTTCCEEEEESS-CEEEEEEE
T ss_pred CcceEEEEEeeEEEEEECCEEEEeCCCCEEEECcCCceeeEeCC-CcEEEEEE
Confidence 48999999999999999988999999999999999999998744 67766553
No 30
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=97.88 E-value=9.5e-05 Score=58.72 Aligned_cols=55 Identities=11% Similarity=0.180 Sum_probs=46.9
Q ss_pred ecCCCCEEEEEEeCeEEEEEecceE-EecCCeEEEECCccEEEeeCCCC-CeEEEEEe
Q 019943 22 CNADGDFLVVPQKGRLWIATECGKL-EVSPGEIAVLPQGFRFAVSLPDG-PSRGYIAE 77 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~te~G~l-~v~pGd~~VIPRG~~~Rv~~~~~-~~r~~iiE 77 (333)
+| +.+|+++|++|++.+..+.... .+++||+++||.|+.|++...++ +++.+++.
T Consensus 44 ~H-~~~e~~~Vl~G~~~~~i~~~~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i~ 100 (117)
T 2b8m_A 44 YS-NSYVHLIIIKGEMTLTLEDQEPHNYKEGNIVYVPFNVKMLIQNINSDILEFFVVK 100 (117)
T ss_dssp EC-SSCEEEEEEESEEEEEETTSCCEEEETTCEEEECTTCEEEEECCSSSEEEEEEEE
T ss_pred eC-CCcEEEEEEeCEEEEEECCEEEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEE
Confidence 44 7899999999999999999999 99999999999999999986443 45666663
No 31
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=97.85 E-value=7.2e-05 Score=57.96 Aligned_cols=54 Identities=13% Similarity=0.093 Sum_probs=43.5
Q ss_pred ecCCCCEE-EEEEeCeEEEEEe-cceEEecCCeEEEECCccEEEeeCCCCCeEEEEE
Q 019943 22 CNADGDFL-VVPQKGRLWIATE-CGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIA 76 (333)
Q Consensus 22 ~n~DgDeL-~~v~~G~l~l~te-~G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~ii 76 (333)
+|....|+ +++++|++.+..+ .....+++||.++||.|+.|++...+ .++.+++
T Consensus 50 ~H~~~~e~~~~vl~G~~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~-~~~~l~~ 105 (110)
T 2q30_A 50 SHNIEGELNIVVLEGEGEFVGDGDAVIPAPRGAVLVAPISTPHGVRAVT-DMKVLVT 105 (110)
T ss_dssp CCSSSCEEEEEEEESCEEEECGGGCEEEECTTEEEEEETTSCEEEEESS-SEEEEEE
T ss_pred cCCCCccEEEEEEeCEEEEEeCCCEEEEECCCCEEEeCCCCcEEEEEcC-CcEEEEE
Confidence 34334677 8999999999998 57899999999999999999988643 5665443
No 32
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=97.79 E-value=0.00019 Score=60.66 Aligned_cols=59 Identities=8% Similarity=-0.055 Sum_probs=49.5
Q ss_pred ceecCCCCEEEEEEeCeEEEEEec---------ceEEecCCeEEEECCccEEEeeCCC--CCeEEEEEeec
Q 019943 20 AFCNADGDFLVVPQKGRLWIATEC---------GKLEVSPGEIAVLPQGFRFAVSLPD--GPSRGYIAEIF 79 (333)
Q Consensus 20 ~~~n~DgDeL~~v~~G~l~l~te~---------G~l~v~pGd~~VIPRG~~~Rv~~~~--~~~r~~iiE~~ 79 (333)
.-+| +.+|+++|++|++.+.++. ....+++||.++||.|+.|++...+ .+++.+++-..
T Consensus 56 ~H~H-~~~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~ 125 (163)
T 1lr5_A 56 IHRH-SCEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQVLVIISR 125 (163)
T ss_dssp EEEE-SSCEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEEEECTTCCEEEECCCSSSCEEEEEEEES
T ss_pred CeEC-CCCeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEEEECCCCcEEeEeCCCCCCEEEEEEECC
Confidence 3455 6789999999999999998 7899999999999999999998644 46777776554
No 33
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=97.76 E-value=0.00014 Score=62.86 Aligned_cols=56 Identities=9% Similarity=0.109 Sum_probs=48.0
Q ss_pred eecCCCCEEEEEEeCeEEEEEec----ceEEecCCeEEEECCccEEEeeCC--CCCeEEEEE
Q 019943 21 FCNADGDFLVVPQKGRLWIATEC----GKLEVSPGEIAVLPQGFRFAVSLP--DGPSRGYIA 76 (333)
Q Consensus 21 ~~n~DgDeL~~v~~G~l~l~te~----G~l~v~pGd~~VIPRG~~~Rv~~~--~~~~r~~ii 76 (333)
..+.+++|+++|++|++.+..+. ....+++||.++||.|+.|++... +.+++.+++
T Consensus 135 ~h~h~~~E~~~Vl~G~~~~~~~~~~~~~~~~l~~GD~~~~~~~~~H~~~n~~~~~~~~~l~v 196 (198)
T 2bnm_A 135 NSGHAGNEFLFVLEGEIHMKWGDKENPKEALLPTGASMFVEEHVPHAFTAAKGTGSAKLIAV 196 (198)
T ss_dssp CCCCSSCEEEEEEESCEEEEESCTTSCEEEEECTTCEEEECTTCCEEEEESTTSCCEEEEEE
T ss_pred cccCCCeEEEEEEeeeEEEEECCcCCcccEEECCCCEEEeCCCCceEEEecCCCCCeEEEEE
Confidence 45567799999999999999998 789999999999999999999754 346777665
No 34
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=97.74 E-value=0.00011 Score=68.17 Aligned_cols=59 Identities=14% Similarity=0.175 Sum_probs=51.0
Q ss_pred ceecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCCCCeEEEEEee
Q 019943 20 AFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEI 78 (333)
Q Consensus 20 ~~~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~ 78 (333)
.-.|.+++|+++|++|++++..+.....+++||++.||.|+.|++...+++++.+++=.
T Consensus 61 ~h~H~~~~e~~~Vl~G~~~~~~~~~~~~l~~Gd~~~~p~~~~H~~~n~~~~~~~~~~~~ 119 (337)
T 1y3t_A 61 LHVHKDTHEGILVLDGKLELTLDGERYLLISGDYANIPAGTPHSYRMQSHRTRLVSYTM 119 (337)
T ss_dssp EEECTTCCEEEEEEESCEEEEETTEEEEECTTCEEEECTTCCEEEEECSTTEEEEEEEE
T ss_pred ceeCCCceEEEEEEECEEEEEECCEEEEECCCCEEEECCCCcEEEEECCCCeEEEEEEC
Confidence 44676699999999999999998888999999999999999999986555788887733
No 35
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=97.71 E-value=0.00019 Score=61.91 Aligned_cols=74 Identities=7% Similarity=-0.001 Sum_probs=55.5
Q ss_pred EEEEEEeeCCCCCCCceecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCC--CCCeEEEEEeec
Q 019943 5 FTCNRYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLP--DGPSRGYIAEIF 79 (333)
Q Consensus 5 ~ai~~y~~~~sM~~~~~~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~--~~~~r~~iiE~~ 79 (333)
+.+.++.....-....-+| +.+|+++|++|++.+..+.....+++||+++||.|+.|++... +.+++.+.+-..
T Consensus 56 ~~~~~~~l~pG~~~~~H~H-~~~E~~~Vl~G~~~~~i~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~ 131 (167)
T 3ibm_A 56 FETRYFEVEPGGYTTLERH-EHTHVVMVVRGHAEVVLDDRVEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIVDS 131 (167)
T ss_dssp EEEEEEEECTTCBCCCBBC-SSCEEEEEEESEEEEEETTEEEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEEES
T ss_pred EEEEEEEECCCCCCCCccC-CCcEEEEEEeCEEEEEECCEEEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeC
Confidence 4444444433221224456 5899999999999999999999999999999999999999753 346777766654
No 36
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=97.70 E-value=1.6e-05 Score=79.50 Aligned_cols=199 Identities=15% Similarity=0.167 Sum_probs=102.7
Q ss_pred cCCCCEEEEEEeCeEEEEEe--c--ceEEecCCeEEEECCccEEEeeCCC--CCeEEEEEeecCCceecCCCCCCCCCCC
Q 019943 23 NADGDFLVVPQKGRLWIATE--C--GKLEVSPGEIAVLPQGFRFAVSLPD--GPSRGYIAEIFGTHFQLPDLGPIGANGL 96 (333)
Q Consensus 23 n~DgDeL~~v~~G~l~l~te--~--G~l~v~pGd~~VIPRG~~~Rv~~~~--~~~r~~iiE~~g~~~~lPe~GpiG~ngl 96 (333)
|.+++|++||++|++++... . -...|++||+++||+|+.|.+.-.+ .+++++.+=..+ ..| |.+-.-.|
T Consensus 103 h~~a~E~~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~~P~G~~H~~~N~g~~~~l~~l~v~~~~---~~p--g~~~~F~l 177 (445)
T 2cav_A 103 HSDSDLLVLVLEGQAILVLVNPDGRDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITF---RRP--GTVEDFFL 177 (445)
T ss_dssp EESSEEEEEEEESEEEEEEEETTEEEEEEEETTEEEEECTTCCEEEEECCSSCCEEEEEEEECC---SST--TCCCEEES
T ss_pred CCCCceEEEEEeCEEEEEEEeCCCCEEEEecCCCEEEECCCCcEEEEECCCCCCEEEEEEeccC---CCC--Cceeeeec
Confidence 78999999999999999863 2 3578999999999999999987543 345554333321 122 22111111
Q ss_pred C---------C--C-----CCccCCcccccc----CccccEEEEEEECCceEEEEcCCCCCeEeeecCC-ccceEeccCC
Q 019943 97 A---------A--P-----RDFLVPTAWFEE----GSRLGYTIVQKFGGELFTARQDFSPFNVVAWHGN-YVPYKYDLSK 155 (333)
Q Consensus 97 a---------~--~-----RDf~~P~a~~e~----~~~~~~~vv~K~~g~l~~~~~~hsPfDVVgW~G~-~~Pykynl~~ 155 (333)
+ . + .-|.++....+. .+...+-|.++ .++.-...... ..-++.|. -.++.|||.+
T Consensus 178 aG~~~~~~~~~~~~~~vLa~af~v~~~~v~~l~~~~~~~g~Iv~~~-~~~~~~~~~~~---~~~~~~g~~~~~~~~~l~~ 253 (445)
T 2cav_A 178 SSTKRLPSYLSAFSKNFLEASYDSPYDEIEQTLLQEEQEGVIVKMP-KDQIQEISKHA---QSSSRKTLSSQDKPFNLRS 253 (445)
T ss_dssp SCCSSCCCGGGGSCHHHHHHHHTSCHHHHHHHTTSCCSSSSEEECC-CC-----------------------CCCEETTS
T ss_pred cCCCchhhhhhcCCHHHHHHHhCCCHHHHHhhhcccCCCCcEEEeC-Ccchhhhcccc---cccCCCCCCCcccceeccc
Confidence 1 0 1 112222221110 01112333333 22211100000 01123342 2356677753
Q ss_pred ceeccccccccCCCCcceEEeecCC-CC-----CceeeeEEEeCCccccCCCCCCCCCCCCCCccceeEEeeccccc---
Q 019943 156 FCPFNTVLVDHGDPSINTVLTAPTD-KP-----GVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEA--- 226 (333)
Q Consensus 156 F~pi~s~~~dH~dPsi~tvlta~s~-~~-----g~~~~dFviF~PRw~~~~~t~rpPyyHrN~dsE~m~~i~G~y~a--- 226 (333)
=.|+-+ +.--.+.++.+. -| |.++.-. ...++++++|.+|.|. +|+++++.|.-..
T Consensus 254 ~~p~~~-------~~~G~v~~~~~~~fP~L~~l~is~~~v-------~l~pg~m~~PH~hp~A-~ei~~V~~G~~~v~vv 318 (445)
T 2cav_A 254 RDPIYS-------NNYGKLYEITPEKNSQLRDLDILLNCL-------QMNEGALFVPHYNSRA-TVILVANEGRAEVELV 318 (445)
T ss_dssp SCCSEE-------SSSEEEEEECTTTCHHHHHHTEEEEEE-------EECTTEEEEEEEESSC-EEEEEEEESCEEEEEE
T ss_pred cCCCcc-------CCCceEEEeChHHCcccccCCCceEEE-------EeeCCceeeeEECCCC-cEEEEEEeeEEEEEEE
Confidence 333211 112233333322 12 3333221 3579999999999987 8999999985321
Q ss_pred -------------c----cCCcCCCeeeeecCCCCC
Q 019943 227 -------------K----ADGFLPGGASLHSCMTPH 245 (333)
Q Consensus 227 -------------~----~~g~~pG~~SlHp~g~pH 245 (333)
+ ...+.+|-+-.-|+|.+|
T Consensus 319 ~~~~~~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h 354 (445)
T 2cav_A 319 GLEQQQQQGLESMQLRRYAATLSEGDIIVIPSSFPV 354 (445)
T ss_dssp EC-----------CCEEEEEEECTTCEEEECTTCCE
T ss_pred eCCCcccccccCcceEEEEeEecCCcEEEEcCCcEE
Confidence 0 012789999999999998
No 37
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=97.70 E-value=8.4e-05 Score=64.86 Aligned_cols=54 Identities=20% Similarity=0.288 Sum_probs=44.2
Q ss_pred cCCCCEEEEEEeCeEEEEEe----cceEEecCCeEEEECCccEEEeeCCCC--CeEEEEE
Q 019943 23 NADGDFLVVPQKGRLWIATE----CGKLEVSPGEIAVLPQGFRFAVSLPDG--PSRGYIA 76 (333)
Q Consensus 23 n~DgDeL~~v~~G~l~l~te----~G~l~v~pGd~~VIPRG~~~Rv~~~~~--~~r~~ii 76 (333)
|.+++|+++|++|++++... .-...|++||.++||+|+.|++.-.++ +++++.+
T Consensus 58 h~~a~E~~yVl~G~~~v~v~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~~l~~l~v 117 (178)
T 1dgw_A 58 HSDSDLLVLVLEGQAILVLVNPDGRDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKF 117 (178)
T ss_dssp EESSEEEEEEEESEEEEEEEETTEEEEEEEETTEEEEECTTCCEEEEECCSSSCEEEEEE
T ss_pred CCCCCEEEEEEeEEEEEEEEeCCCcEEEEECCCCEEEECCCCeEEEEeCCCCCCEEEEEE
Confidence 78899999999999999885 446889999999999999999976443 3444444
No 38
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=97.69 E-value=0.00014 Score=58.23 Aligned_cols=56 Identities=13% Similarity=-0.000 Sum_probs=45.1
Q ss_pred eecCCCCEEEEEEeCeEEEEE-ecceEEecCCeEEEECCccEEEeeCC-CCCeEEEEE
Q 019943 21 FCNADGDFLVVPQKGRLWIAT-ECGKLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIA 76 (333)
Q Consensus 21 ~~n~DgDeL~~v~~G~l~l~t-e~G~l~v~pGd~~VIPRG~~~Rv~~~-~~~~r~~ii 76 (333)
-+|...+|+++|++|++.+.. +.....+++||.++||+|+.|++... +.+++.+.+
T Consensus 55 H~H~~~~e~~~Vl~G~~~~~~~~~~~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~v 112 (125)
T 3h8u_A 55 HVHPHGQDTWTVISGEAEYHQGNGIVTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVSV 112 (125)
T ss_dssp C-CTTCEEEEEEEECEEEEECSTTCEEEEETTEEEEECTTCCCEEEECSSSCEEEEEE
T ss_pred ccCCCCeEEEEEEEeEEEEEECCCeEEEeCCCCEEEECCCCEEEeEeCCCCCEEEEEE
Confidence 356666999999999999998 56679999999999999999999764 335555544
No 39
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=97.69 E-value=6e-05 Score=76.02 Aligned_cols=47 Identities=15% Similarity=0.181 Sum_probs=37.5
Q ss_pred cCCCCCCCCCCCCCCccceeEEeeccccc-------cc---CCcCCCeeeeecCCCCC
Q 019943 198 VAEHTFRPPYYHRNCMSEFMGLIRGGYEA-------KA---DGFLPGGASLHSCMTPH 245 (333)
Q Consensus 198 ~~~~t~rpPyyHrN~dsE~m~~i~G~y~a-------~~---~g~~pG~~SlHp~g~pH 245 (333)
..++++++|.+|-| .+|+++++.|.-.. ++ ..+.+|-+-.-|.|.+|
T Consensus 330 l~pGgm~~PHwHp~-A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~~GDVfvvP~g~~h 386 (465)
T 3qac_A 330 LYRNAMMAPHYNLN-AHNIMYCVRGRGRIQIVNDQGQSVFDEELSRGQLVVVPQNFAI 386 (465)
T ss_dssp ECTTCEEEEEEESS-CCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEE
T ss_pred ecCCcEeeeEECCC-CCEEEEEEeCCEEEEEEeCCCcEEEEEEecCCeEEEECCCcEE
Confidence 57999999999999 46999999997521 10 12679999999999998
No 40
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=97.69 E-value=0.00013 Score=59.32 Aligned_cols=55 Identities=13% Similarity=-0.025 Sum_probs=47.6
Q ss_pred CCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCC-CCeEEEEEeec
Q 019943 25 DGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPD-GPSRGYIAEIF 79 (333)
Q Consensus 25 DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~-~~~r~~iiE~~ 79 (333)
++.|+++|++|++++..+.....+++||.++||.|+.|++.... ++++.+.+-..
T Consensus 67 ~~~e~~~Vl~G~~~~~i~~~~~~l~~Gd~i~ip~g~~H~~~~~~~~~~~~l~v~~~ 122 (126)
T 1vj2_A 67 PWEHEIFVLKGKLTVLKEQGEETVEEGFYIFVEPNEIHGFRNDTDSEVEFLCLIPK 122 (126)
T ss_dssp SSCEEEEEEESEEEEECSSCEEEEETTEEEEECTTCCEEEECCSSSCEEEEEEEEG
T ss_pred CCcEEEEEEEeEEEEEECCEEEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEcc
Confidence 48999999999999999999999999999999999999998643 36777766543
No 41
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=97.69 E-value=0.00022 Score=57.38 Aligned_cols=59 Identities=14% Similarity=0.169 Sum_probs=47.9
Q ss_pred eecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCC-CCCeEEEEEeec
Q 019943 21 FCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIAEIF 79 (333)
Q Consensus 21 ~~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~-~~~~r~~iiE~~ 79 (333)
-+|...++++++++|++.+..+.....+++||.++||.|+.|++... +.+++.+++-..
T Consensus 43 H~H~~~e~~~~vl~G~~~~~i~~~~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~~~~i~~~ 102 (125)
T 3cew_A 43 HSHKQNEEIYGILSGKGFITIDGEKIELQAGDWLRIAPDGKRQISAASDSPIGFLCIQVK 102 (125)
T ss_dssp EEESSEEEEEEEEEEEEEEEETTEEEEEETTEEEEECTTCCEEEEEBTTBCEEEEEEEEE
T ss_pred ccCCCceEEEEEEeCEEEEEECCEEEEeCCCCEEEECCCCcEEEEcCCCCCEEEEEEEcC
Confidence 45554555666999999999999999999999999999999998764 346777777655
No 42
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=97.68 E-value=0.00011 Score=66.23 Aligned_cols=46 Identities=13% Similarity=0.284 Sum_probs=40.5
Q ss_pred ecCCCCEEEEEEeCeEEEEEecc-----eEEecCCeEEEECCccEEEeeCCC
Q 019943 22 CNADGDFLVVPQKGRLWIATECG-----KLEVSPGEIAVLPQGFRFAVSLPD 68 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~te~G-----~l~v~pGd~~VIPRG~~~Rv~~~~ 68 (333)
+|. .+|++++++|++.+..+.+ .+.+++||+++||+|+.|+....+
T Consensus 101 ~H~-~~Ei~yVleG~G~f~i~d~~d~~~~i~v~~GDlIiIPaG~~H~f~~~~ 151 (191)
T 1vr3_A 101 LHL-DEEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDE 151 (191)
T ss_dssp ECS-SCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEECT
T ss_pred ECC-cceEEEEEeceEEEEECCCCCeEEEEEECCCCEEEECcCCcCCcccCC
Confidence 454 4999999999999999975 579999999999999999998744
No 43
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=97.68 E-value=0.00019 Score=69.04 Aligned_cols=57 Identities=19% Similarity=0.242 Sum_probs=49.7
Q ss_pred ecCCCCEEEEEEeCeEEEEEec-ceEEecCCeEEEECCccEEEeeCCCCCeEEEEEee
Q 019943 22 CNADGDFLVVPQKGRLWIATEC-GKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEI 78 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~te~-G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~ 78 (333)
.+.++|++++|++|+++|+.+. ...++++||.++||+|+.|.+...+..++++++=.
T Consensus 268 h~~~~~~~~~vleG~~~i~i~g~~~~~l~~Gd~~~iPag~~h~~~~~~~~~~~l~~~~ 325 (350)
T 1juh_A 268 WSFPGACAFQVQEGRVVVQIGDYAATELGSGDVAFIPGGVEFKYYSEAYFSKVLFVSS 325 (350)
T ss_dssp BCCSSCEEEEEEESCEEEEETTSCCEEECTTCEEEECTTCCEEEEESSSSEEEEEEEE
T ss_pred ccCCCcEEEEEEeeEEEEEECCeEEEEeCCCCEEEECCCCCEEEEecCCeEEEEEEec
Confidence 3589999999999999999998 78999999999999999999987665666666654
No 44
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=97.66 E-value=9.2e-05 Score=74.43 Aligned_cols=47 Identities=15% Similarity=0.124 Sum_probs=37.6
Q ss_pred cCCCCCCCCCCCCCCccceeEEeeccccccc----------CCcCCCeeeeecCCCCC
Q 019943 198 VAEHTFRPPYYHRNCMSEFMGLIRGGYEAKA----------DGFLPGGASLHSCMTPH 245 (333)
Q Consensus 198 ~~~~t~rpPyyHrN~dsE~m~~i~G~y~a~~----------~g~~pG~~SlHp~g~pH 245 (333)
..++++++|-+|.|. +|+++++.|.-...- .-+.+|-+-+-|.|.+|
T Consensus 329 l~pG~~~~pH~Hp~A-~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~GDv~v~P~G~~H 385 (459)
T 2e9q_A 329 LYSNAMVAPHYTVNS-HSVMYATRGNARVQVVDNFGQSVFDGEVREGQVLMIPQNFVV 385 (459)
T ss_dssp ECTTCEEEEEEESSC-CEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEE
T ss_pred eeCCcCccceECCCC-CEEEEEEeeEEEEEEEeCCCCEEEeeEEeCCcEEEECCCCEE
Confidence 578999999888887 799999999642211 02679999999999999
No 45
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=97.64 E-value=0.00013 Score=59.43 Aligned_cols=58 Identities=16% Similarity=0.185 Sum_probs=48.0
Q ss_pred ecCCCCEEEEEEeCeEEEE--EecceEEecCCeEEEECCccEEEeeCC-CCCeEEEEEeecC
Q 019943 22 CNADGDFLVVPQKGRLWIA--TECGKLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIAEIFG 80 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~--te~G~l~v~pGd~~VIPRG~~~Rv~~~-~~~~r~~iiE~~g 80 (333)
+|. +.|+++|++|++.+. .+.....+++||.++||+|+.|++... +.+++.+++-+.+
T Consensus 56 ~H~-~~e~~~vl~G~~~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l~i~~~~ 116 (145)
T 3ht1_A 56 FHE-WEHEIYVLEGSMGLVLPDQGRTEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLVVAPCE 116 (145)
T ss_dssp ECS-SCEEEEEEEECEEEEEGGGTEEEEECTTCEEEECTTCCBEEECCTTCCEEEEEEEESC
T ss_pred cCC-CceEEEEEEeEEEEEEeECCEEEEECCCCEEEECCCCeEEeEcCCCCCEEEEEEECCC
Confidence 444 666778999999999 888889999999999999999999864 3467877776653
No 46
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=97.63 E-value=0.00032 Score=57.63 Aligned_cols=55 Identities=5% Similarity=-0.042 Sum_probs=46.7
Q ss_pred ecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCC-CCeEEEEE
Q 019943 22 CNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPD-GPSRGYIA 76 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~-~~~r~~ii 76 (333)
+|.+..|+++|++|++.+..+.....+++||.++||.|+.|++.... .+++.+.+
T Consensus 74 ~H~~~~E~~~Vl~G~~~~~i~~~~~~l~~Gd~i~i~~~~~H~~~n~~~~~~~~l~v 129 (133)
T 1o4t_A 74 KHEGEFEIYYILLGEGVFHDNGKDVPIKAGDVCFTDSGESHSIENTGNTDLEFLAV 129 (133)
T ss_dssp ECCSEEEEEEEEESEEEEEETTEEEEEETTEEEEECTTCEEEEECCSSSCEEEEEE
T ss_pred ECCCccEEEEEEeCEEEEEECCEEEEeCCCcEEEECCCCcEEeEECCCCCEEEEEE
Confidence 45456899999999999999999999999999999999999998643 35666655
No 47
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=97.63 E-value=0.00028 Score=65.54 Aligned_cols=58 Identities=10% Similarity=0.087 Sum_probs=50.7
Q ss_pred ceecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCCCCeEEEEEe
Q 019943 20 AFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAE 77 (333)
Q Consensus 20 ~~~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE 77 (333)
.-+|..++|+++|++|++++..+.....+++||.++||.|+.|++...+++++.+++=
T Consensus 233 ~h~H~~~~e~~~vl~G~~~~~i~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~l~v~ 290 (337)
T 1y3t_A 233 DHYHEYHTETFYCLEGQMTMWTDGQEIQLNPGDFLHVPANTVHSYRLDSHYTKMVGVL 290 (337)
T ss_dssp CEECSSCEEEEEEEESCEEEEETTEEEEECTTCEEEECTTCCEEEEECSSSEEEEEEE
T ss_pred CcCCCCCcEEEEEEeCEEEEEECCEEEEECCCCEEEECCCCeEEEEECCCCeEEEEEE
Confidence 4567778999999999999999999999999999999999999998755477777763
No 48
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=97.62 E-value=0.00015 Score=63.88 Aligned_cols=57 Identities=9% Similarity=0.078 Sum_probs=50.7
Q ss_pred ecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeC-CCCCeEEEEEee
Q 019943 22 CNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSL-PDGPSRGYIAEI 78 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~-~~~~~r~~iiE~ 78 (333)
.+.+++|++||++|++.|....-...+++||.+.||+|+.|++.- .+.++|++.+-.
T Consensus 106 ~~h~gEE~~yVLeG~v~vtl~g~~~~L~~Gds~~iP~g~~H~~~N~~d~~Arll~Vq~ 163 (166)
T 2vpv_A 106 NSFRTYITFHVIQGIVEVTVCKNKFLSVKGSTFQIPAFNEYAIANRGNDEAKMFFVQV 163 (166)
T ss_dssp ECCSEEEEEEEEESEEEEEETTEEEEEETTCEEEECTTCEEEEEECSSSCEEEEEEEE
T ss_pred cCCCceEEEEEEEeEEEEEECCEEEEEcCCCEEEECCCCCEEEEECCCCCEEEEEEEE
Confidence 678999999999999999999989999999999999999999975 345789888743
No 49
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=97.62 E-value=0.0001 Score=74.31 Aligned_cols=49 Identities=10% Similarity=0.087 Sum_probs=38.4
Q ss_pred cCCCCCCCCCCCCCCccceeEEeecccccccC----------CcCCCeeeeecCCCCCCC
Q 019943 198 VAEHTFRPPYYHRNCMSEFMGLIRGGYEAKAD----------GFLPGGASLHSCMTPHGP 247 (333)
Q Consensus 198 ~~~~t~rpPyyHrN~dsE~m~~i~G~y~a~~~----------g~~pG~~SlHp~g~pHGP 247 (333)
..+++.++|-+|.|. +|+++.+.|...-.-. -+.+|-+-+-|.|++|+-
T Consensus 345 l~pGa~~~pH~Hp~a-~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GDv~viP~G~~H~~ 403 (476)
T 1fxz_A 345 LRKNAMFVPHYNLNA-NSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNFVVAA 403 (476)
T ss_dssp ECTTCEEEEEEETTC-CEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEE
T ss_pred ecCCceecceECCCC-CEEEEEEeCEEEEEEEecCCCEEeeeEEcCCCEEEECCCCeEEE
Confidence 568889999777765 7999999997643211 188999999999999964
No 50
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=97.59 E-value=0.00018 Score=66.38 Aligned_cols=55 Identities=7% Similarity=0.007 Sum_probs=47.2
Q ss_pred CceecCCCCEEEEEEeCeEEEEE--------ecc------------eEEecCCeEEEECCccEEEeeCCC-CCeEE
Q 019943 19 CAFCNADGDFLVVPQKGRLWIAT--------ECG------------KLEVSPGEIAVLPQGFRFAVSLPD-GPSRG 73 (333)
Q Consensus 19 ~~~~n~DgDeL~~v~~G~l~l~t--------e~G------------~l~v~pGd~~VIPRG~~~Rv~~~~-~~~r~ 73 (333)
..-.|..++|+|+|++|++++.. +.. ...+++||+++||+|+.|++.-.+ .++++
T Consensus 57 ~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~H~~~N~~~~~~~~ 132 (239)
T 2xlg_A 57 MPHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYMHGFVNPTDKTLPI 132 (239)
T ss_dssp CSEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEEEEEECCSSSCEEE
T ss_pred CCeECCCccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeEEEECCCCEEEECCCCCEEEEeCCCCCEEE
Confidence 35578889999999999999988 666 899999999999999999997543 45777
No 51
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=97.57 E-value=0.0004 Score=61.38 Aligned_cols=58 Identities=16% Similarity=0.110 Sum_probs=46.9
Q ss_pred ceecCCCCEEEEEEeCeEEEEEecc--------eEEecCCeEEEECCccEEEeeCC-CCCeEEEEEe
Q 019943 20 AFCNADGDFLVVPQKGRLWIATECG--------KLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIAE 77 (333)
Q Consensus 20 ~~~n~DgDeL~~v~~G~l~l~te~G--------~l~v~pGd~~VIPRG~~~Rv~~~-~~~~r~~iiE 77 (333)
.-+|..++|+++|++|++++....+ ...+++||.++||+|+.|++.-. +.+++.+.+-
T Consensus 87 ~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~v~ 153 (201)
T 1fi2_A 87 PHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSF 153 (201)
T ss_dssp EEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEE
T ss_pred CeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEEEEeCCCCCEEEEEEE
Confidence 4467778999999999999998632 68899999999999999998643 3456666554
No 52
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=97.55 E-value=0.00031 Score=63.07 Aligned_cols=53 Identities=28% Similarity=0.251 Sum_probs=46.4
Q ss_pred CCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCCCCeEEEEE
Q 019943 24 ADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIA 76 (333)
Q Consensus 24 ~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~ii 76 (333)
..++++++|++|++.+..+.....+++||.++||.|+.|++....++++++++
T Consensus 171 H~~~e~~~Vl~G~~~~~i~g~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~ll~ 223 (227)
T 3rns_A 171 APGDALVTVLDGEGKYYVDGKPFIVKKGESAVLPANIPHAVEAETENFKMLLI 223 (227)
T ss_dssp CSSEEEEEEEEEEEEEEETTEEEEEETTEEEEECTTSCEEEECCSSCEEEEEE
T ss_pred CCCcEEEEEEeEEEEEEECCEEEEECCCCEEEECCCCcEEEEeCCCCEEEEEE
Confidence 45889999999999999999999999999999999999999862346777765
No 53
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=97.52 E-value=0.00052 Score=60.38 Aligned_cols=57 Identities=18% Similarity=0.155 Sum_probs=46.8
Q ss_pred ecC--CCCEEEEEEeCeEEEEEecce-----EEecCCeEEEECCccEEEeeCC-CCCeEEEEEee
Q 019943 22 CNA--DGDFLVVPQKGRLWIATECGK-----LEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIAEI 78 (333)
Q Consensus 22 ~n~--DgDeL~~v~~G~l~l~te~G~-----l~v~pGd~~VIPRG~~~Rv~~~-~~~~r~~iiE~ 78 (333)
+|. +.+|+++|++|++.+..+... ..+++||.++||.|+.|++.-. +.+++.+.+-.
T Consensus 90 ~H~~~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~v~ip~g~~H~~~N~g~~~~~~l~v~~ 154 (190)
T 1x82_A 90 FHAKLDRAEVYVALKGKGGMLLQTPEGDAKWISMEPGTVVYVPPYWAHRTVNIGDEPFIFLAIYP 154 (190)
T ss_dssp BCSSTTCCEEEEEEESCEEEEEECTTCCEEEEEECTTCEEEECTTCEEEEEECSSSCEEEEEEEE
T ss_pred ECCCCCCCEEEEEEcCEEEEEEcCcCCcEEEEEECCCcEEEECCCCeEEEEECCcccEEEEEEEC
Confidence 455 568999999999999998866 9999999999999999998754 34666665543
No 54
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=97.51 E-value=5.9e-05 Score=60.27 Aligned_cols=60 Identities=13% Similarity=0.063 Sum_probs=47.4
Q ss_pred ecCCCCEEEEEEeCeEEEEEecce---EEecCCeEEEECCccEEEeeCC-CCCeEEEEEeecCC
Q 019943 22 CNADGDFLVVPQKGRLWIATECGK---LEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIAEIFGT 81 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~te~G~---l~v~pGd~~VIPRG~~~Rv~~~-~~~~r~~iiE~~g~ 81 (333)
+|....+++++.+|+++++.+.|. ..+++||.+.+|+|+.|++.-. +.+++++.||..++
T Consensus 34 ~H~~~~~iv~v~~G~~~~~~~dG~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi~vE~k~~ 97 (98)
T 2ozi_A 34 THGMDYVVVPMADGEMTIVAPDGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEIELKAG 97 (98)
T ss_dssp ECCSCEEEEESSCBC-CEECTTSCEECCCBCTTCCEEECTTCEEEEEECSSSCEEEEEEEECC-
T ss_pred eCCCCEEEEEEeeEEEEEEeCCCcEEEEEECCCCEEEECCCCceeCEECCCCCEEEEEEEEcCC
Confidence 455555566678999999999996 5899999999999999999753 44789999998754
No 55
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=97.50 E-value=0.00025 Score=68.19 Aligned_cols=58 Identities=10% Similarity=0.063 Sum_probs=49.1
Q ss_pred ceecCCCCEEEEEEeCeEEEEEec-----ceEEecCCeEEEECCccEEEeeCCCCCeEEEEEe
Q 019943 20 AFCNADGDFLVVPQKGRLWIATEC-----GKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAE 77 (333)
Q Consensus 20 ~~~n~DgDeL~~v~~G~l~l~te~-----G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE 77 (333)
.-.|.+++|+++|++|++.+..+. ....+++||+++||+|+.|++...+++.+++++=
T Consensus 65 ~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~~~~l~v~ 127 (350)
T 1juh_A 65 PHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDTEMTGVI 127 (350)
T ss_dssp CEECSSCEEEEEEEESEEEEEEEETTSCCEEEEEETTCEEEECTTEEEEEEECSTTEEEEEEE
T ss_pred cccCCCceEEEEEEEEEEEEEECCcCCceEEEEECCCCEEEECCCCcEEEEeCCCCCEEEEEE
Confidence 346778999999999999999988 7899999999999999999998655455665553
No 56
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=97.50 E-value=0.00038 Score=62.50 Aligned_cols=54 Identities=15% Similarity=0.070 Sum_probs=46.9
Q ss_pred CCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCCCCeEEEEEee
Q 019943 24 ADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEI 78 (333)
Q Consensus 24 ~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~ 78 (333)
.++|++++|++|++.+........+++||+++||.|+.|++...+ .++.+-|..
T Consensus 55 h~~~~~~~Vl~G~~~~~i~~~~~~l~~Gd~~~~p~~~~H~~~a~~-~~~~l~i~~ 108 (227)
T 3rns_A 55 MLGNRYYYCFNGNGEIFIENNKKTISNGDFLEITANHNYSIEARD-NLKLIEIGE 108 (227)
T ss_dssp CSSCEEEEEEESEEEEEESSCEEEEETTEEEEECSSCCEEEEESS-SEEEEEEEE
T ss_pred cCCCEEEEEEeCEEEEEECCEEEEECCCCEEEECCCCCEEEEECC-CcEEEEEEe
Confidence 479999999999999999988999999999999999999998743 566665543
No 57
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=97.47 E-value=0.00068 Score=61.92 Aligned_cols=63 Identities=6% Similarity=-0.188 Sum_probs=50.7
Q ss_pred ceecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCC-C-CCeEEEEEeecCCc
Q 019943 20 AFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLP-D-GPSRGYIAEIFGTH 82 (333)
Q Consensus 20 ~~~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~-~-~~~r~~iiE~~g~~ 82 (333)
.-.|...+|+++|++|++.+..+.....+++||.+.||.|+.|++... + ++++.+++-....|
T Consensus 194 ~h~H~~~~E~~~Vl~G~~~~~i~~~~~~l~~GD~i~~~~~~~H~~~n~g~~~~~~~l~~~d~~r~ 258 (261)
T 1rc6_A 194 YIETHVQEHGAYILSGQGVYNLDNNWIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSKDCNRD 258 (261)
T ss_dssp EEEEESSCEEEEEEESEEEEESSSCEEEEETTCEEEECSSEEEEEEEC----CEEEEEEEECSCC
T ss_pred cccCCCceEEEEEEEeEEEEEECCEEEEeCCCCEEEECCCCcEEeEeCCCCcCEEEEEEecCCCC
Confidence 345667899999999999999999899999999999999999998764 3 45677766444333
No 58
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.46 E-value=0.00039 Score=64.50 Aligned_cols=70 Identities=16% Similarity=0.121 Sum_probs=55.7
Q ss_pred EEEEEEeeCCCCCCCceecCCCCEEEEEEeCeEEEEEecce-EEecCCeEEEECCccEEEeeCCCCCeEEEEE
Q 019943 5 FTCNRYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGK-LEVSPGEIAVLPQGFRFAVSLPDGPSRGYIA 76 (333)
Q Consensus 5 ~ai~~y~~~~sM~~~~~~n~DgDeL~~v~~G~l~l~te~G~-l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~ii 76 (333)
+...+|.|...- ..-+.-+.||++++++|+++|..+.|. +++++||.++||+|.+=.++..+.--+.|+|
T Consensus 167 ~~~GiW~~tpG~--~~~~~~~~~E~~~ILeG~v~lt~~~G~~~~~~aGD~~~~P~G~~~tWev~e~vrK~Yvi 237 (238)
T 3myx_A 167 LRIGVWDSTPYE--RISRPHKIHELMNLIEGRVVLSLENGSSLTVNTGDTVFVAQGAPCKWTSTGYVRKFYAV 237 (238)
T ss_dssp CEEEEEEECCEE--BCCEECSSCEEEEEEECCEEEEETTSCEEEECTTCEEEECTTCEEEEEESSCEEEEEEE
T ss_pred EEEeEEEeCCCE--EECCcCCCCEEEEEEEeEEEEEeCCCCEEEECCCCEEEECCCCEEEEEECccEEEEEEe
Confidence 466788887732 122344788999999999999999986 9999999999999999988876544577765
No 59
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=97.39 E-value=0.00046 Score=65.26 Aligned_cols=59 Identities=15% Similarity=0.177 Sum_probs=47.9
Q ss_pred ceecCCCCEEEEEEeCeEEEEEe--cc---eEEecCCeEEEECCccEEEeeCCC-CCeEEEEEee
Q 019943 20 AFCNADGDFLVVPQKGRLWIATE--CG---KLEVSPGEIAVLPQGFRFAVSLPD-GPSRGYIAEI 78 (333)
Q Consensus 20 ~~~n~DgDeL~~v~~G~l~l~te--~G---~l~v~pGd~~VIPRG~~~Rv~~~~-~~~r~~iiE~ 78 (333)
.-.|.+++|+++|++|++++... .| ...+++||+++||+|+.|++...+ ++++.+.+-.
T Consensus 67 ~H~H~~~~E~~yVl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~g~~H~~~n~~~~~~~~l~v~~ 131 (361)
T 2vqa_A 67 LHWHANAAEWAYVMEGRTRITLTSPEGKVEIADVDKGGLWYFPRGWGHSIEGIGPDTAKFLLVFN 131 (361)
T ss_dssp EEECTTCCEEEEEEESEEEEEEECTTSCEEEEEEETTEEEEECTTCEEEEEECSSSCEEEEEEES
T ss_pred ceeCCCCCEEEEEEEeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEEC
Confidence 34677799999999999999994 23 489999999999999999997644 4677766543
No 60
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=97.37 E-value=0.00048 Score=59.14 Aligned_cols=56 Identities=9% Similarity=-0.059 Sum_probs=47.4
Q ss_pred CCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCC-CCeEEEEEeecC
Q 019943 25 DGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPD-GPSRGYIAEIFG 80 (333)
Q Consensus 25 DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~-~~~r~~iiE~~g 80 (333)
+..|+++|++|++.+..+.....+++||.++||.|+.|++.... .+++.+.+-+..
T Consensus 63 ~~~E~~~Vl~G~~~v~v~g~~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~i~~~~ 119 (156)
T 3kgz_A 63 AHVHAVMIHRGHGQCLVGETISDVAQGDLVFIPPMTWHQFRANRGDCLGFLCVVNAA 119 (156)
T ss_dssp SSCEEEEEEEEEEEEEETTEEEEEETTCEEEECTTCCEEEECCSSSCEEEEEEEESS
T ss_pred CCcEEEEEEeCEEEEEECCEEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEeCC
Confidence 46799999999999999999999999999999999999997643 356666666553
No 61
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=97.34 E-value=0.00053 Score=59.51 Aligned_cols=58 Identities=16% Similarity=0.013 Sum_probs=48.6
Q ss_pred ecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCC-CCCeEEEEEeecC
Q 019943 22 CNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIAEIFG 80 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~-~~~~r~~iiE~~g 80 (333)
+|. ..|+++|++|++.+..+.....+++||.++||.|+.|++... +.+++.+.+-+..
T Consensus 70 ~H~-~~E~~~Vl~G~~~~~v~g~~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l~i~~~~ 128 (166)
T 3jzv_A 70 RHQ-HAHGVMILKGRGHAMVGRAVSAVAPYDLVTIPGWSWHQFRAPADEALGFLCMVNAE 128 (166)
T ss_dssp BCS-SCEEEEEEEECEEEEETTEEEEECTTCEEEECTTCCEEEECCTTSCEEEEEEEESS
T ss_pred eCC-CcEEEEEEeCEEEEEECCEEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEccC
Confidence 454 579999999999999999999999999999999999999764 3466777666653
No 62
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=97.34 E-value=0.00084 Score=56.35 Aligned_cols=54 Identities=7% Similarity=0.075 Sum_probs=45.4
Q ss_pred CCCEEEEEEeCeEEEEEecce-EEecCCeEEEECCccEEEeeCCC-CCeEEEEEee
Q 019943 25 DGDFLVVPQKGRLWIATECGK-LEVSPGEIAVLPQGFRFAVSLPD-GPSRGYIAEI 78 (333)
Q Consensus 25 DgDeL~~v~~G~l~l~te~G~-l~v~pGd~~VIPRG~~~Rv~~~~-~~~r~~iiE~ 78 (333)
++.|+++|++|++.+..+... ..+++||.++||.|+.|+..... .+++.+.+-.
T Consensus 67 ~~~E~~~Vl~G~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~ 122 (147)
T 2f4p_A 67 PGGQILIVTRGKGFYQERGKPARILKKGDVVEIPPNVVHWHGAAPDEELVHIGIST 122 (147)
T ss_dssp TTCEEEEEEEEEEEEEETTSCCEEEETTCEEEECTTCCEEEEEBTTBCEEEEEEEC
T ss_pred CCceEEEEEeCEEEEEECCEEEEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEc
Confidence 458999999999999999997 99999999999999999987643 3556555544
No 63
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=97.34 E-value=0.00045 Score=64.40 Aligned_cols=56 Identities=16% Similarity=0.231 Sum_probs=49.5
Q ss_pred CCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCC-CCCeEEEEEeec
Q 019943 24 ADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIAEIF 79 (333)
Q Consensus 24 ~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~-~~~~r~~iiE~~ 79 (333)
.+++|+++|++|++.++.+.....+++||++.||+|+.|++.-. +.+++.+++...
T Consensus 88 H~~eE~~~Vl~G~l~v~v~g~~~~L~~GD~i~ip~~~~H~~~N~g~~~~~~l~v~~~ 144 (278)
T 1sq4_A 88 PNAEAVLFVVEGELSLTLQGQVHAMQPGGYAFIPPGADYKVRNTTGQHTRFHWIRKH 144 (278)
T ss_dssp TTEEEEEEEEESCEEEEESSCEEEECTTEEEEECTTCCEEEECCSSSCEEEEEEEEE
T ss_pred CCceEEEEEEeCEEEEEECCEEEEECCCCEEEECCCCcEEEEECCCCCEEEEEEEec
Confidence 46899999999999999999999999999999999999999864 347888888753
No 64
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=97.29 E-value=0.00014 Score=64.61 Aligned_cols=44 Identities=7% Similarity=0.023 Sum_probs=37.5
Q ss_pred CCCEEEEEEeCeEEEEEe-cce---EEecCCeEEEECCccEEEeeCCC
Q 019943 25 DGDFLVVPQKGRLWIATE-CGK---LEVSPGEIAVLPQGFRFAVSLPD 68 (333)
Q Consensus 25 DgDeL~~v~~G~l~l~te-~G~---l~v~pGd~~VIPRG~~~Rv~~~~ 68 (333)
+.+|+++|++|++.+..+ .|. +.+++||+++||+|+.|+....+
T Consensus 99 ~~~Ei~~Vl~G~g~~~i~~~d~~~~~~l~~GDli~IP~g~~H~~~~~~ 146 (179)
T 1zrr_A 99 GEDEVRFFVEGAGLFCLHIGDEVFQVLCEKNDLISVPAHTPHWFDMGS 146 (179)
T ss_dssp SSCEEEEEEESCCCCCEECSSCEEEEECCCSCEEEECTTCCBCCCCSS
T ss_pred ChheEEEEEcceEEEEEEeCCEEEEEEECCCCEEEECCCCeEeeecCC
Confidence 459999999999999775 443 67999999999999999988644
No 65
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=97.26 E-value=0.0017 Score=59.82 Aligned_cols=64 Identities=9% Similarity=-0.088 Sum_probs=51.7
Q ss_pred eecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCC--CCeEEEEEeecCCceec
Q 019943 21 FCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPD--GPSRGYIAEIFGTHFQL 85 (333)
Q Consensus 21 ~~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~--~~~r~~iiE~~g~~~~l 85 (333)
-.| .++|+++|++|++.+..+.....|++||.++||.|+.|++.... .+++.+++=....++.|
T Consensus 199 H~H-~~~E~~yVl~G~~~~~i~~~~~~l~~GD~i~i~~~~~H~~~n~~~~~~~~~l~~~~~~r~~~~ 264 (274)
T 1sef_A 199 ETH-VQEHGAYLISGQGMYNLDNEWYPVEKGDYIFMSAYVPQAAYAVGREEPLMYVYSKDANREPEL 264 (274)
T ss_dssp BCC-SCCEEEEEEECEEEEEETTEEEEEETTCEEEECTTCCEEEEEECSSSCEEEEEEEECSSCCCC
T ss_pred eec-cCeEEEEEEeCEEEEEECCEEEEECCCCEEEECCCCCEEEEeCCCCCCEEEEEEEcCCCCccc
Confidence 345 68999999999999999999999999999999999999987643 45677766544455544
No 66
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=97.20 E-value=0.00067 Score=58.53 Aligned_cols=53 Identities=8% Similarity=-0.169 Sum_probs=44.8
Q ss_pred cCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCC-CCeEEEEE
Q 019943 23 NADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPD-GPSRGYIA 76 (333)
Q Consensus 23 n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~-~~~r~~ii 76 (333)
..+++|+++|++|++.+..+.....+++||.++||.|+.|++...+ +++ .+++
T Consensus 123 ~h~~~E~~~Vl~G~~~~~~~~~~~~l~~GD~i~i~~~~~H~~~n~~~~~~-~l~v 176 (192)
T 1y9q_A 123 ALGVIEYIHVLEGIMKVFFDEQWHELQQGEHIRFFSDQPHGYAAVTEKAV-FQNI 176 (192)
T ss_dssp STTCEEEEEEEESCEEEEETTEEEEECTTCEEEEECSSSEEEEESSSCEE-EEEE
T ss_pred CCCCEEEEEEEEeEEEEEECCEEEEeCCCCEEEEcCCCCeEeECCCCCcE-EEEE
Confidence 3567999999999999999988899999999999999999998643 355 4444
No 67
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=97.14 E-value=0.0012 Score=60.69 Aligned_cols=73 Identities=14% Similarity=0.094 Sum_probs=56.7
Q ss_pred eeEEEEEEeeCCCCCCCceecCCCCEEEEEEeCeEEEEEe-cceEEecCCeEEEECCccEEEeeCCCCCeEEEEEee
Q 019943 3 MLFTCNRYTANKSMDNCAFCNADGDFLVVPQKGRLWIATE-CGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEI 78 (333)
Q Consensus 3 ~~~ai~~y~~~~sM~~~~~~n~DgDeL~~v~~G~l~l~te-~G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~ 78 (333)
+.+++-+...+..-+ . ....++|+++|++|++.++.+ .....+++||.++||.|+.|.+...+.+...+.+-.
T Consensus 132 l~lG~v~l~PG~~yP--~-HsHp~EEiy~VLsG~~e~~v~~g~~~~l~pGd~v~ipsgv~Ha~rt~dePllalwvW~ 205 (217)
T 4b29_A 132 LRVTVGYWGPGLDYG--W-HEHLPEELYSVVSGRALFHLRNAPDLMLEPGQTRFHPANAPHAMTTLTDPILTLVLWR 205 (217)
T ss_dssp CEEEEEEECSSCEEE--E-EECSSEEEEEEEEECEEEEETTSCCEEECTTCEEEECTTCCEEEECCSSCEEEEEEEE
T ss_pred EEEEEEEECCCCcCC--C-CCCCCceEEEEEeCCEEEEECCCCEEecCCCCEEEcCCCCceeEEECCccEEEEEEEe
Confidence 445555555444322 2 233578999999999999999 566899999999999999999998777888888775
No 68
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=97.12 E-value=0.00047 Score=54.61 Aligned_cols=61 Identities=13% Similarity=0.064 Sum_probs=48.6
Q ss_pred ceecCCCCEEEEEEeCeEEEEEecce---EEecCCeEEEECCccEEEeeCC-CCCeEEEEEeecC
Q 019943 20 AFCNADGDFLVVPQKGRLWIATECGK---LEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIAEIFG 80 (333)
Q Consensus 20 ~~~n~DgDeL~~v~~G~l~l~te~G~---l~v~pGd~~VIPRG~~~Rv~~~-~~~~r~~iiE~~g 80 (333)
.=+|....+.+++.+|+++++..+|. ..+++||.+.||+|+.||+.=+ +.++.++-+|-.+
T Consensus 32 ~H~H~~~~e~~~v~~G~~~v~~~d~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~pl~~IeVE~K~ 96 (98)
T 3lag_A 32 HHTHGMDYVVVPMADGEMTIVAPDGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEIELKA 96 (98)
T ss_dssp SEECCSCEEEEESSCBC-CEECTTSCEECCCBCTTCCEEECTTCEEEEBCCSSSCEEEEEEEECC
T ss_pred cEECCCcEEEEEEeccEEEEEeCCCceEEEEecCCcEEEEcCCCcEECEECCCCeEEEEEEEEcc
Confidence 45777778899999999999998875 5589999999999999999743 3467777777653
No 69
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=97.10 E-value=0.0023 Score=60.48 Aligned_cols=60 Identities=13% Similarity=0.169 Sum_probs=48.0
Q ss_pred ceecCCCCEEEEEEeCeEEEEEe--cc---eEEecCCeEEEECCccEEEeeCC-CCCeEEEEEeec
Q 019943 20 AFCNADGDFLVVPQKGRLWIATE--CG---KLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIAEIF 79 (333)
Q Consensus 20 ~~~n~DgDeL~~v~~G~l~l~te--~G---~l~v~pGd~~VIPRG~~~Rv~~~-~~~~r~~iiE~~ 79 (333)
.-.|.+.+|+++|++|++++... .| ...+++||.++||+|+.|++... +++++.+.+-..
T Consensus 249 ~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~~~ 314 (361)
T 2vqa_A 249 LHWHPNADEWQYVLDGEMDLTVFASEGKASVSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVFND 314 (361)
T ss_dssp EEECSSCCEEEEEEESCEEEEEECSTTCEEEEEECTTCEEEECTTCEEEEECCSSSCEEEEEEESS
T ss_pred cccCCCCCEEEEEEeCEEEEEEEcCCCcEEEEEECCCCEEEECCCCeEEeEECCCCCEEEEEEECC
Confidence 34677779999999999999872 45 68999999999999999998764 345777666543
No 70
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=97.07 E-value=0.0012 Score=58.36 Aligned_cols=60 Identities=18% Similarity=0.165 Sum_probs=48.5
Q ss_pred CCCCEEEEEEeCeEEEEEecc-eEEecCCeEEEECCccEEEeeCC-CCCeEEEEEeecCCcee
Q 019943 24 ADGDFLVVPQKGRLWIATECG-KLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIAEIFGTHFQ 84 (333)
Q Consensus 24 ~DgDeL~~v~~G~l~l~te~G-~l~v~pGd~~VIPRG~~~Rv~~~-~~~~r~~iiE~~g~~~~ 84 (333)
..+.|.++|++|++.|+.+.| ...+++||.+ ||+|+.|++.-. +.++|++.+=..+..+.
T Consensus 97 H~~eE~~~VLeGel~l~ld~ge~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l~V~~P~~p~~ 158 (172)
T 3es1_A 97 TNSIDYGIVLEGEIELELDDGAKRTVRQGGII-VQRGTNHLWRNTTDKPCRIAFILIEAPAYL 158 (172)
T ss_dssp CSEEEEEEEEESCEEEECGGGCEEEECTTCEE-EECSCCBEEECCSSSCEEEEEEEEECCCCE
T ss_pred cCceEEEEEEeCEEEEEECCCeEEEECCCCEE-EeCCCcEEEEeCCCCCEEEEEEEcCCCcee
Confidence 356788899999999999854 6889999999 999999999754 45788888766655443
No 71
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=97.06 E-value=0.0034 Score=51.36 Aligned_cols=57 Identities=14% Similarity=0.124 Sum_probs=48.2
Q ss_pred CCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCC--CCeEEEEEeecC
Q 019943 24 ADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPD--GPSRGYIAEIFG 80 (333)
Q Consensus 24 ~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~--~~~r~~iiE~~g 80 (333)
.+.-+++++.+|++.+..+.....+++||+++||.|+.|+....+ ++.+.+++--.+
T Consensus 36 h~~~~i~~v~~G~~~~~i~~~~~~l~~Gd~~~i~p~~~H~~~~~~~~~~~~~~~i~f~~ 94 (164)
T 2arc_A 36 MKGYILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFRP 94 (164)
T ss_dssp CSSEEEEEEEEECEEEEETTEEEEECTTCEEEECTTCCEEEEECTTSSEEEEEEEEECC
T ss_pred CCceEEEEEEEeEEEEEECCEEEEecCCeEEEEcCCCCEEEEeCCCCCcEEEEEEEECC
Confidence 466789999999999999999999999999999999999987643 346777776554
No 72
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=97.02 E-value=0.0011 Score=60.48 Aligned_cols=58 Identities=12% Similarity=0.076 Sum_probs=50.3
Q ss_pred ecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCC-CCCeEEEEEeec
Q 019943 22 CNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIAEIF 79 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~-~~~~r~~iiE~~ 79 (333)
.+..++|+++|++|++.|..+.....|++||.+.+|.|+.|++.-. +.+++.+++...
T Consensus 77 ~~~~~ee~~~Vl~G~l~~~~~~~~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~~l~v~~~ 135 (261)
T 1rc6_A 77 GGEGIETFLYVISGNITAKAEGKTFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLYKRR 135 (261)
T ss_dssp CCTTEEEEEEEEESEEEEEETTEEEEEETTEEEEECTTCCCEEEECSSSCEEEEEEEEE
T ss_pred CCCCceEEEEEEEeEEEEEECCEEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEEec
Confidence 3456789999999999999998899999999999999999999754 457898888754
No 73
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=97.01 E-value=0.001 Score=60.15 Aligned_cols=52 Identities=10% Similarity=-0.021 Sum_probs=44.7
Q ss_pred CCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCC-CCCeEEEEE
Q 019943 25 DGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIA 76 (333)
Q Consensus 25 DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~-~~~~r~~ii 76 (333)
.++|+++|++|++.+.++.+...+++||.+.||.|+.|++... +++++.+.+
T Consensus 165 ~~~e~~~Vl~G~~~~~i~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v 217 (243)
T 3h7j_A 165 RNEQIGICIGGGYDMTVEGCTVEMKFGTAYFCEPREDHGAINRSEKESKSINI 217 (243)
T ss_dssp SSEEEEEECSSCEEEEETTEEEEECTTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred CCcEEEEEEECEEEEEECCEEEEECCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 4689999999999999999999999999999999999999864 335555544
No 74
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=97.00 E-value=0.0029 Score=60.49 Aligned_cols=60 Identities=10% Similarity=0.001 Sum_probs=47.9
Q ss_pred ceecCCCCEEEEEEeCeEEEEEe-----cceEEecCCeEEEECCccEEEeeCC-CCCeEEEEEeec
Q 019943 20 AFCNADGDFLVVPQKGRLWIATE-----CGKLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIAEIF 79 (333)
Q Consensus 20 ~~~n~DgDeL~~v~~G~l~l~te-----~G~l~v~pGd~~VIPRG~~~Rv~~~-~~~~r~~iiE~~ 79 (333)
.-+|...+|+++|++|++++... .-...+++||.++||+|+.|++... +++++.+.+-..
T Consensus 272 ~h~H~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v~~~ 337 (385)
T 1j58_A 272 LHWHPNTHEWQYYISGKARMTVFASDGHARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKD 337 (385)
T ss_dssp EEECSSSCEEEEEEESEEEEEEEEETTEEEEEEEESSCEEEECTTCBEEEEECSSSCEEEEEEESS
T ss_pred ceeCCCCCEEEEEEeCeEEEEEEcCCCcEEEEEEcCCCEEEECCCCeEEEEECCCCCEEEEEEECC
Confidence 34666669999999999999876 4459999999999999999998754 346777766543
No 75
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=97.00 E-value=0.0012 Score=59.69 Aligned_cols=52 Identities=10% Similarity=-0.034 Sum_probs=44.4
Q ss_pred CCCEEEEEEeCeEEEEEecceEEecCCeEE-EECCccEEEeeCCC-CCeEEEEE
Q 019943 25 DGDFLVVPQKGRLWIATECGKLEVSPGEIA-VLPQGFRFAVSLPD-GPSRGYIA 76 (333)
Q Consensus 25 DgDeL~~v~~G~l~l~te~G~l~v~pGd~~-VIPRG~~~Rv~~~~-~~~r~~ii 76 (333)
.++|+++|++|++.+.++.....+++||.+ +||.|+.|++...+ .+++.+-+
T Consensus 53 ~~~e~~~Vl~G~~~~~~~~~~~~l~~Gd~i~~ip~~~~H~~~n~~~~~~~~l~i 106 (243)
T 3h7j_A 53 KEVQIGMVVSGELMMTVGDVTRKMTALESAYIAPPHVPHGARNDTDQEVIAIDI 106 (243)
T ss_dssp SSEEEEEEEESEEEEEETTEEEEEETTTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred CCcEEEEEEEeEEEEEECCEEEEECCCCEEEEcCCCCcEeeEeCCCCcEEEEEE
Confidence 489999999999999999999999999999 59999999998643 35665544
No 76
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=97.00 E-value=0.00065 Score=61.92 Aligned_cols=53 Identities=13% Similarity=0.058 Sum_probs=48.4
Q ss_pred CCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCCCCeEEEEEeec
Q 019943 26 GDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIF 79 (333)
Q Consensus 26 gDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~~ 79 (333)
++|+++|++|++.+..+.....+++||.+.+|.|+.|++.-. ++++++++...
T Consensus 68 ~ee~~~Vl~G~~~~~~~~~~~~l~~Gd~~~~p~~~~H~~~n~-~~~~~l~v~~~ 120 (246)
T 1sfn_A 68 YQRFAFVLSGEVDVAVGGETRTLREYDYVYLPAGEKHMLTAK-TDARVSVFEKP 120 (246)
T ss_dssp SEEEEEEEEEEEEEECSSCEEEECTTEEEEECTTCCCEEEEE-EEEEEEEEEEC
T ss_pred eeEEEEEEECEEEEEECCEEEEECCCCEEEECCCCCEEEEeC-CCEEEEEEEee
Confidence 899999999999999999999999999999999999999865 68898888753
No 77
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=96.92 E-value=0.00082 Score=67.81 Aligned_cols=47 Identities=9% Similarity=0.061 Sum_probs=37.5
Q ss_pred cCCCCCCCCCCCCCCccceeEEeecccccc-------c---CCcCCCeeeeecCCCCC
Q 019943 198 VAEHTFRPPYYHRNCMSEFMGLIRGGYEAK-------A---DGFLPGGASLHSCMTPH 245 (333)
Q Consensus 198 ~~~~t~rpPyyHrN~dsE~m~~i~G~y~a~-------~---~g~~pG~~SlHp~g~pH 245 (333)
..++++++|-+|.| .+|+++++.|.-... + ..+.+|-+-.-|.|.+|
T Consensus 330 L~pGgm~~PHwHp~-A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H 386 (466)
T 3kgl_A 330 IRQNAMVLPQWNAN-ANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQLLSIPQGFSV 386 (466)
T ss_dssp EETTEEEEEEEESS-CCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEE
T ss_pred eecCcEeeeeECCC-CCEEEEEEeceEEEEEEeCCCcEEEEeEecCCcEEEECCCCeE
Confidence 57999999999988 469999999964321 0 12679999999999999
No 78
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=96.90 E-value=0.0015 Score=60.31 Aligned_cols=57 Identities=14% Similarity=0.182 Sum_probs=49.7
Q ss_pred ecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCC-CCCeEEEEEee
Q 019943 22 CNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIAEI 78 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~-~~~~r~~iiE~ 78 (333)
.+..++|+++|++|++.|..+.....|++||.+.+|.|+.|++.-. +.+++++++..
T Consensus 80 ~~~~~ee~~~Vl~G~l~~~~~~~~~~L~~GD~~~~~~~~~H~~~N~~~~~~~~l~v~~ 137 (274)
T 1sef_A 80 GGDGIQTLVYVIDGRLRVSDGQETHELEAGGYAYFTPEMKMYLANAQEADTEVFLYKK 137 (274)
T ss_dssp SBTTEEEEEEEEESEEEEECSSCEEEEETTEEEEECTTSCCEEEESSSSCEEEEEEEE
T ss_pred CCCCceEEEEEEEeEEEEEECCEEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEEe
Confidence 3556789999999999999998899999999999999999999754 45788888774
No 79
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=96.88 E-value=0.0014 Score=66.32 Aligned_cols=58 Identities=16% Similarity=0.190 Sum_probs=45.6
Q ss_pred ceecCCCCEEEEEEeCeEEEEEecc--e----EEecCCeEEEECCccEEEeeCCCCCeEEEEEe
Q 019943 20 AFCNADGDFLVVPQKGRLWIATECG--K----LEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAE 77 (333)
Q Consensus 20 ~~~n~DgDeL~~v~~G~l~l~te~G--~----l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE 77 (333)
.-.|.+++|+++|++|++++..... . ..|++||++|||+|+.|.....++.+.++.+-
T Consensus 382 pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~GDv~vvP~G~~H~~~n~~e~~~~l~~~ 445 (493)
T 2d5f_A 382 PHWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRRGQLLVVPQNFVVAEQGGEQGLEYVVFK 445 (493)
T ss_dssp EEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEE
T ss_pred eeECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEcCCCEEEECCCCeEeeeeCCCCEEEEEEE
Confidence 5578899999999999999987653 2 34999999999999999987533344555544
No 80
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=96.88 E-value=0.0017 Score=64.23 Aligned_cols=72 Identities=18% Similarity=0.240 Sum_probs=50.0
Q ss_pred eEEEEEEeeCCCCCCCceecCCCCEEEEEEeCeEEEEEe----cceEEecCCeEEEECCccEEEeeCCCCCeEEEEEee
Q 019943 4 LFTCNRYTANKSMDNCAFCNADGDFLVVPQKGRLWIATE----CGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEI 78 (333)
Q Consensus 4 ~~ai~~y~~~~sM~~~~~~n~DgDeL~~v~~G~l~l~te----~G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~ 78 (333)
.++......+.... -.|.+.+|++||++|++++... .-...|++||+++||+|+.|.+.-.++...+.+++.
T Consensus 50 s~~~~~l~PGg~~~---pHh~~a~E~~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~iP~G~~H~~~N~gg~e~l~~l~~ 125 (416)
T 1uij_A 50 RIVQFQSKPNTILL---PHHADADFLLFVLSGRAILTLVNNDDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQNLKMIWL 125 (416)
T ss_dssp EEEEEEECTTEEEE---EEEESEEEEEEEEESCEEEEEECSSCEEEEEECTTEEEEECTTCEEEEEECCSSCCEEEEEE
T ss_pred EEEEEEeccCcCcc---cccCCCceEEEEEeeEEEEEEEECCCCeEEEecCCCEEEECCCCeEEEEecCCCCCEEEEEE
Confidence 34444444444322 2378999999999999999862 235889999999999999999876532333444443
No 81
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=96.84 E-value=0.0022 Score=61.30 Aligned_cols=53 Identities=11% Similarity=0.101 Sum_probs=42.0
Q ss_pred ceecCCCCEEEEEEeCeEEEEEec--c---eEEecCCeEEEECCccEEEeeCCCCCeEE
Q 019943 20 AFCNADGDFLVVPQKGRLWIATEC--G---KLEVSPGEIAVLPQGFRFAVSLPDGPSRG 73 (333)
Q Consensus 20 ~~~n~DgDeL~~v~~G~l~l~te~--G---~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~ 73 (333)
.-+|. ++|+++|++|++++.... | ...+++||+++||+|+.|++...+++++.
T Consensus 94 ~H~H~-~~E~~~Vl~G~~~~~~~~~~g~~~~~~l~~GD~~~ip~g~~H~~~n~~~~~~~ 151 (385)
T 1j58_A 94 LHWHK-EAEWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALEEGAEF 151 (385)
T ss_dssp EEEES-SCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEEEEEEEEE
T ss_pred CccCC-hheEEEEEeeeEEEEEEeCCCcEEEEEeCCCCEEEECCCCeEEEEECCCCEEE
Confidence 34555 899999999999999853 3 45899999999999999999764433443
No 82
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=96.72 E-value=0.003 Score=62.93 Aligned_cols=70 Identities=21% Similarity=0.217 Sum_probs=50.2
Q ss_pred eeEEEEEEeeCCCCCCCceecCCCCEEEEEEeCeEEEEEe----cceEEecCCeEEEECCccEEEeeCCC--CCeEEEE
Q 019943 3 MLFTCNRYTANKSMDNCAFCNADGDFLVVPQKGRLWIATE----CGKLEVSPGEIAVLPQGFRFAVSLPD--GPSRGYI 75 (333)
Q Consensus 3 ~~~ai~~y~~~~sM~~~~~~n~DgDeL~~v~~G~l~l~te----~G~l~v~pGd~~VIPRG~~~Rv~~~~--~~~r~~i 75 (333)
+.++......+..... .|.+.+|++||++|++++... .-...|++||+++||+|+.|.+.-.+ .+.+++.
T Consensus 61 ~s~~~~~l~PGg~~~p---Hh~~a~Ei~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~~e~l~~l~ 136 (434)
T 2ea7_A 61 YRVVEFKSKPNTLLLP---HHADADFLLVVLNGTAVLTLVNPDSRDSYILEQGHAQKIPAGTTFFLVNPDDNENLRIIK 136 (434)
T ss_dssp CEEEEEEECTTEEEEE---EEESEEEEEEEEESEEEEEEECSSCEEEEEEETTEEEEECTTCEEEEEECCSSCCEEEEE
T ss_pred EEEEEEEecCCcCccC---ccCCCceEEEEEecEEEEEEEeCCCCEEEEeCCCCEEEECCCccEEEEeCCCCCCeEEEE
Confidence 3344444444444332 388999999999999999874 23578999999999999999987643 2445443
No 83
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=96.71 E-value=0.002 Score=60.49 Aligned_cols=57 Identities=14% Similarity=0.136 Sum_probs=50.9
Q ss_pred ecCCCCEEEEEEeCeEEEEEe-cceEEecCCeEEEECCccEEEeeCCCCCeEEEEEeec
Q 019943 22 CNADGDFLVVPQKGRLWIATE-CGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIF 79 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~te-~G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~~ 79 (333)
.+.+++|.++|++|++.|..+ .....+++||++.+|.|..|++.- ++++|+++++..
T Consensus 86 ~~h~~EEfiyVleG~l~l~l~~g~~~~L~~Gds~y~p~~~~H~~~N-~~~Ar~l~V~k~ 143 (266)
T 4e2q_A 86 PPQDIERLIFVVEGAVTLTNTSSSSKKLTVDSYAYLPPNFHHSLDC-VESATLVVFERR 143 (266)
T ss_dssp CCTTEEEEEEEEEECEEEEC--CCCEEECTTEEEEECTTCCCEEEE-SSCEEEEEEEEE
T ss_pred CCCCCeEEEEEEEEEEEEEECCCcEEEEcCCCEEEECCCCCEEEEe-CCCEEEEEEEeE
Confidence 467899999999999999998 677999999999999999999985 568999999875
No 84
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=96.67 E-value=0.0058 Score=61.61 Aligned_cols=58 Identities=19% Similarity=0.300 Sum_probs=45.5
Q ss_pred ceecCCCCEEEEEEeCeEEEEEec--ce--E--EecCCeEEEECCccEEEeeCCCCCeEEEEEe
Q 019943 20 AFCNADGDFLVVPQKGRLWIATEC--GK--L--EVSPGEIAVLPQGFRFAVSLPDGPSRGYIAE 77 (333)
Q Consensus 20 ~~~n~DgDeL~~v~~G~l~l~te~--G~--l--~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE 77 (333)
.-.|..++|+++|++|++++.... |. + .|++||++|||+|+.|.+...++...++.+-
T Consensus 353 pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GDv~viP~G~~H~~~ng~~~l~~l~f~ 416 (476)
T 1fxz_A 353 PHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNFVVAARSQSDNFEYVSFK 416 (476)
T ss_dssp EEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEECSTTEEEEEEE
T ss_pred ceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcCCCEEEECCCCeEEEEeCCCCEEEEEEE
Confidence 557889999999999999998754 32 3 3999999999999999987643344555444
No 85
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=96.59 E-value=0.011 Score=58.49 Aligned_cols=70 Identities=10% Similarity=0.057 Sum_probs=52.9
Q ss_pred EEEEEeeCCCCCCCceecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCC--CCCeEEEEEee
Q 019943 6 TCNRYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLP--DGPSRGYIAEI 78 (333)
Q Consensus 6 ai~~y~~~~sM~~~~~~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~--~~~~r~~iiE~ 78 (333)
.+.+...+.+.+ .-+|. .+++|+|++|++.+..+..++.+++||+++||.|..|++.-. +++++.+.+..
T Consensus 297 ~~~~l~PG~~~~--~HrH~-~~~v~~VleG~G~~~V~ge~~~~~~GD~~~iP~g~~H~~~N~g~~e~~~ll~i~D 368 (394)
T 3bu7_A 297 SMQMLRPGEHTK--AHRHT-GNVIYNVAKGQGYSIVGGKRFDWSEHDIFCVPAWTWHEHCNTQERDDACLFSFND 368 (394)
T ss_dssp EEEEECTTCBCC--CEEES-SCEEEEEEECCEEEEETTEEEEECTTCEEEECTTCCEEEEECCSSCCEEEEEEES
T ss_pred EEEEECCCCcCC--CcccC-CcEEEEEEeCeEEEEECCEEEEEeCCCEEEECCCCeEEeEeCCCCCCeEEEEeeC
Confidence 334444444432 45666 568999999999888877789999999999999999998753 34677777764
No 86
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=96.57 E-value=0.006 Score=62.14 Aligned_cols=73 Identities=16% Similarity=0.222 Sum_probs=50.8
Q ss_pred eeEEEEEEeeCCCCCCCceecCCCCEEEEEEeCeEEEEEec--c-e-E--EecCCeEEEECCccEEEeeCCCCCeEEEEE
Q 019943 3 MLFTCNRYTANKSMDNCAFCNADGDFLVVPQKGRLWIATEC--G-K-L--EVSPGEIAVLPQGFRFAVSLPDGPSRGYIA 76 (333)
Q Consensus 3 ~~~ai~~y~~~~sM~~~~~~n~DgDeL~~v~~G~l~l~te~--G-~-l--~v~pGd~~VIPRG~~~Rv~~~~~~~r~~ii 76 (333)
|.++.-.+..+. |- ..=.|..++|+++|++|++++.... | . + .|++||++|||+|+.|.+...++...++.+
T Consensus 372 is~a~v~L~PG~-~~-~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~GDv~viP~G~~H~~~Ng~e~l~~l~f 449 (510)
T 3c3v_A 372 LSAEYGNLYRNA-LF-VPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQEGHVLVVPQNFAVAGKSQSDNFEYVAF 449 (510)
T ss_dssp CEEEEEEEETTC-EE-EEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEECSSEEEEEEE
T ss_pred EEEEEEEecCCc-ee-cceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcCCcEEEECCCCeEEEEeCCCCEEEEEE
Confidence 344444444444 32 2557889999999999999998754 3 2 3 499999999999999998763333444444
Q ss_pred e
Q 019943 77 E 77 (333)
Q Consensus 77 E 77 (333)
-
T Consensus 450 ~ 450 (510)
T 3c3v_A 450 K 450 (510)
T ss_dssp E
T ss_pred E
Confidence 3
No 87
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=96.46 E-value=0.0076 Score=58.09 Aligned_cols=66 Identities=12% Similarity=0.014 Sum_probs=49.8
Q ss_pred EEeeCCCCCCCceecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCCCCeEEEEE
Q 019943 9 RYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIA 76 (333)
Q Consensus 9 ~y~~~~sM~~~~~~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~ii 76 (333)
+.....-.....-+|.+. ++++|++|++++.-+.-+..+++||.++||+++.|++.. +++++++.+
T Consensus 272 ~~~l~pG~~~~~H~h~~~-ev~~v~~G~g~~~v~~~~~~~~~GD~~~vP~~~~H~~~n-~e~~~l~~~ 337 (354)
T 2d40_A 272 LQLLPKGFASRVARTTDS-TIYHVVEGSGQVIIGNETFSFSAKDIFVVPTWHGVSFQT-TQDSVLFSF 337 (354)
T ss_dssp EEEECTTCBCCCBEESSC-EEEEEEEEEEEEEETTEEEEEETTCEEEECTTCCEEEEE-EEEEEEEEE
T ss_pred EEEECCCCCCCceecCCc-EEEEEEeCeEEEEECCEEEEEcCCCEEEECCCCeEEEEe-CCCEEEEEE
Confidence 333333222345677777 999999999999998778999999999999999999976 334554444
No 88
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=96.45 E-value=0.018 Score=52.30 Aligned_cols=78 Identities=10% Similarity=-0.009 Sum_probs=61.2
Q ss_pred ceeEEEEEEeeCCCCCCCceecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCC-CCCeEEEEEeecC
Q 019943 2 DMLFTCNRYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIAEIFG 80 (333)
Q Consensus 2 ~~~~ai~~y~~~~sM~~~~~~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~-~~~~r~~iiE~~g 80 (333)
+|.+.+-.+....+.+. ..+..++|.+++++|++.+........|++||++.++.+..|++..+ ++++|.+++--.+
T Consensus 164 ~~~~~~~tl~PG~~~~~--~~~h~~ee~~~vLeG~~~~~~~~~~~~l~~GD~~~~~~~~pH~~~n~g~~~~~yl~~kd~~ 241 (246)
T 1sfn_A 164 DFMVSTMSFAPGASLPY--AEVHYMEHGLLMLEGEGLYKLEENYYPVTAGDIIWMGAHCPQWYGALGRNWSKYLLYKDMN 241 (246)
T ss_dssp SEEEEEEEECTTCBCSS--CBCCSSCEEEEEEECEEEEEETTEEEEEETTCEEEECTTCCEEEEEESSSCEEEEEEEECS
T ss_pred CeEEEEEEECCCCccCc--ccCCCceEEEEEEECEEEEEECCEEEEcCCCCEEEECCCCCEEEEcCCCCCEEEEEEEecc
Confidence 45566666666666652 24466789999999999999988889999999999999999998753 4578888876554
Q ss_pred C
Q 019943 81 T 81 (333)
Q Consensus 81 ~ 81 (333)
.
T Consensus 242 r 242 (246)
T 1sfn_A 242 R 242 (246)
T ss_dssp S
T ss_pred c
Confidence 4
No 89
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=96.29 E-value=0.0096 Score=52.81 Aligned_cols=64 Identities=11% Similarity=0.039 Sum_probs=46.3
Q ss_pred EEEEEeeCCCCCCCceecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCC-CCCeEEEEE
Q 019943 6 TCNRYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIA 76 (333)
Q Consensus 6 ai~~y~~~~sM~~~~~~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~-~~~~r~~ii 76 (333)
++--|..+..++. -...|.|+++|++|++. ++.-.+++||++++|.|..|++... ++.|.+|++
T Consensus 128 ~l~~~~pG~~~p~---H~H~g~E~~~VL~G~f~----de~~~~~~Gd~~~~p~g~~H~p~a~~~~gc~~l~~ 192 (195)
T 2q1z_B 128 RLLWIPGGQAVPD---HGHRGLELTLVLQGAFR----DETDRFGAGDIEIADQELEHTPVAERGLDCICLAA 192 (195)
T ss_dssp EEEEECTTCBCCC---CCCSSCEEEEEEESEEE----CSSSEEETTCEEEECSSCCCCCEECSSSCEEEEEE
T ss_pred EEEEECCCCCCCC---cCCCCeEEEEEEEEEEE----CCcEEECCCeEEEeCcCCccCCEeCCCCCEEEEEE
Confidence 3444555666653 33379999999999965 4556899999999999999999874 335555543
No 90
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=96.28 E-value=0.006 Score=62.50 Aligned_cols=47 Identities=19% Similarity=0.302 Sum_probs=40.2
Q ss_pred ceecCCCCEEEEEEeCeEEEEEec--c----eEEecCCeEEEECCccEEEeeC
Q 019943 20 AFCNADGDFLVVPQKGRLWIATEC--G----KLEVSPGEIAVLPQGFRFAVSL 66 (333)
Q Consensus 20 ~~~n~DgDeL~~v~~G~l~l~te~--G----~l~v~pGd~~VIPRG~~~Rv~~ 66 (333)
.-.|.+++||++|++|++++.... | .-+|++||++|||+|+.|....
T Consensus 409 PHwHp~A~Ei~yVl~G~~rv~~V~~~G~~v~~~~L~~GDV~v~P~G~~H~~~a 461 (531)
T 3fz3_A 409 PHWNVNAHSVVYVIRGNARVQVVNENGDAILDQEVQQGQLFIVPQNHGVIQQA 461 (531)
T ss_dssp EEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEE
T ss_pred ceEcCCCCEEEEEEeCcEEEEEEeCCCcEEEEEEecCCeEEEECCCCeEEEec
Confidence 457899999999999999988754 4 2579999999999999997654
No 91
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=96.25 E-value=0.0092 Score=57.48 Aligned_cols=56 Identities=14% Similarity=0.077 Sum_probs=44.7
Q ss_pred eecCCCCEEEEEEeCeEEE-EEecceEEecCCeEEEECCccEEEeeCCC-CCeEEEEEe
Q 019943 21 FCNADGDFLVVPQKGRLWI-ATECGKLEVSPGEIAVLPQGFRFAVSLPD-GPSRGYIAE 77 (333)
Q Consensus 21 ~~n~DgDeL~~v~~G~l~l-~te~G~l~v~pGd~~VIPRG~~~Rv~~~~-~~~r~~iiE 77 (333)
-+| +++|+++|++|++.+ ..+.....+++||+++||.|+.|+..-.+ ++++.+.+-
T Consensus 116 H~H-~~~e~~yVl~G~g~~t~v~g~~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l~v~ 173 (354)
T 2d40_A 116 HRH-NQSALRFIVEGKGAFTAVDGERTPMNEGDFILTPQWRWHDHGNPGDEPVIWLDGL 173 (354)
T ss_dssp EEE-SSCEEEEEEECSSCEEEETTEEEECCTTCEEEECTTSCEEEECCSSSCEEEEEEE
T ss_pred eec-CcceEEEEEEEEEEEEEECCEEEEEcCCCEEEECCCCcEEeEeCCCCCEEEEEEE
Confidence 355 578999999999999 55556799999999999999999997643 356665553
No 92
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=96.21 E-value=0.012 Score=58.07 Aligned_cols=59 Identities=19% Similarity=0.223 Sum_probs=48.3
Q ss_pred ceecCCCCEEEEEEeCeEEEEEe--cc---------------eE--EecCCeEEEECCccEEEeeCCCCCeEEEEEeec
Q 019943 20 AFCNADGDFLVVPQKGRLWIATE--CG---------------KL--EVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIF 79 (333)
Q Consensus 20 ~~~n~DgDeL~~v~~G~l~l~te--~G---------------~l--~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~~ 79 (333)
--+|..+.|+++|.+|+++++.- .| .+ +|++||.+|||+|.-|..... +...++.+...
T Consensus 264 pH~h~~A~Ei~~V~~G~~~v~~v~~~g~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~-~~~~~l~f~~~ 341 (416)
T 1uij_A 264 PHFNSKAIVILVINEGDANIELVGIKEQQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNAT-SNLNFLAFGIN 341 (416)
T ss_dssp EEEESSCEEEEEEEESEEEEEEEEEC------------CCEEEEEEEEETTCEEEECTTCCEEEEES-SSEEEEEEEET
T ss_pred ceEcCCCcEEEEEEeeEEEEEEEcCCCccccccccccccceEEEEEEecCCcEEEECCCCeEEEEcC-CCeEEEEEEcC
Confidence 55899999999999999999864 34 56 799999999999999988775 56777666654
No 93
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=96.18 E-value=0.0032 Score=53.12 Aligned_cols=66 Identities=14% Similarity=-0.035 Sum_probs=42.6
Q ss_pred EEEEeeCCCCCCCceecCCCCEEEEEEeCeEEEEEecce--EEecCCeEEEECCccEEEeeCCCCCeEEEE
Q 019943 7 CNRYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGK--LEVSPGEIAVLPQGFRFAVSLPDGPSRGYI 75 (333)
Q Consensus 7 i~~y~~~~sM~~~~~~n~DgDeL~~v~~G~l~l~te~G~--l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~i 75 (333)
+--+..+..++ .=+| .++|.++|++|++..+...-. ..+++||++.+|.|..|++....+.+.+++
T Consensus 48 ~~~~~pG~~~p--~H~H-~~~ee~~VL~G~~~~~~g~~~~~~~~~~Gd~~~~p~g~~H~p~~~~e~~~~l~ 115 (145)
T 2o1q_A 48 IFDCPAGSSFA--AHVH-VGPGEYFLTKGKMDVRGGKAAGGDTAIAPGYGYESANARHDKTEFPVASEFYM 115 (145)
T ss_dssp EEEECTTEEEC--CEEE-SSCEEEEEEEEEEEETTCGGGTSEEEESSEEEEECTTCEESCCEEEEEEEEEE
T ss_pred EEEECCCCCCC--ccCC-CCCEEEEEEEeEEEEcCCCEecceEeCCCEEEEECcCCccCCeECCCCeEEEE
Confidence 33344444443 2233 367779999999996543323 689999999999999999532222454433
No 94
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=96.12 E-value=0.016 Score=52.05 Aligned_cols=73 Identities=18% Similarity=0.117 Sum_probs=57.2
Q ss_pred EEEEEEeeCCCCCCCce--ecCCCCEEEEEEeCeEEEEEecc---eEEecCCeEEEECCccEEEeeCC---CCCeEEEEE
Q 019943 5 FTCNRYTANKSMDNCAF--CNADGDFLVVPQKGRLWIATECG---KLEVSPGEIAVLPQGFRFAVSLP---DGPSRGYIA 76 (333)
Q Consensus 5 ~ai~~y~~~~sM~~~~~--~n~DgDeL~~v~~G~l~l~te~G---~l~v~pGd~~VIPRG~~~Rv~~~---~~~~r~~ii 76 (333)
|-+++|...+.=. ..| .-.|.=+++++.+|++. ..+.. ...+++||+++||.|..|++... +++.+++++
T Consensus 7 ~~~~~~~~~~~~~-~~~~~~~~~~~~i~~v~~G~~~-~i~~~~~~~~~l~~g~l~~i~p~~~h~~~~~~~~~~~~~~~~i 84 (276)
T 3gbg_A 7 FQTNVYRMSKFDT-YIFNNLYINDYKMFWIDSGIAK-LIDKNCLVSYEINSSSIILLKKNSIQRFSLTSLSDENINVSVI 84 (276)
T ss_dssp EEEEEEEECTTCE-EEEEEEECSSCEEEEESSSCEE-EEETTTTEEEEECTTEEEEECTTCEEEEEEEECCSSCEEEEEE
T ss_pred hhhhhhhhhcccc-hhccHhhhcceEEEEEecCceE-EECCccceeEEEcCCCEEEEcCCCceeeccccCCCcceEEEEE
Confidence 5678888866532 222 23467799999999999 99999 99999999999999999998764 246788877
Q ss_pred eec
Q 019943 77 EIF 79 (333)
Q Consensus 77 E~~ 79 (333)
-..
T Consensus 85 ~f~ 87 (276)
T 3gbg_A 85 TIS 87 (276)
T ss_dssp EEC
T ss_pred EEc
Confidence 554
No 95
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=96.06 E-value=0.015 Score=57.31 Aligned_cols=59 Identities=14% Similarity=0.154 Sum_probs=48.1
Q ss_pred ceecCCCCEEEEEEeCeEEEEEec--------c----eEEecCCeEEEECCccEEEeeCCCCCeEEEEEeec
Q 019943 20 AFCNADGDFLVVPQKGRLWIATEC--------G----KLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIF 79 (333)
Q Consensus 20 ~~~n~DgDeL~~v~~G~l~l~te~--------G----~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~~ 79 (333)
--+|.+++|+++|++|+++++.-. | .-+|++||.+|||+|.-|..... +....+.+-..
T Consensus 254 PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~g~~~~~~~l~~GDV~vvP~G~~h~~~n~-~~l~~l~f~~~ 324 (397)
T 2phl_A 254 PHYYSKAIVILVVNEGEAHVELVGPKGNKETLEYESYRAELSKDDVFVIPAAYPVAIKAT-SNVNFTGFGIN 324 (397)
T ss_dssp EEEESSCEEEEEEEESEEEEEEEEECC--CCSCEEEEEEEEETTCEEEECTTCCEEEEES-SSEEEEEEEES
T ss_pred eeEcCCCCEEEEEEeeeEEEEEEeccccccCCCceEEEEEecCCCEEEECCCCeEEEEeC-CCeEEEEEECC
Confidence 558999999999999999999763 4 47799999999999999988765 46666655443
No 96
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=96.02 E-value=0.015 Score=57.84 Aligned_cols=60 Identities=15% Similarity=0.210 Sum_probs=48.2
Q ss_pred CceecCCCCEEEEEEeCeEEEEEec--c--------------eE--EecCCeEEEECCccEEEeeCCCCCeEEEEEeec
Q 019943 19 CAFCNADGDFLVVPQKGRLWIATEC--G--------------KL--EVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIF 79 (333)
Q Consensus 19 ~~~~n~DgDeL~~v~~G~l~l~te~--G--------------~l--~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~~ 79 (333)
.--+|..+.|+++|.+|+++++.-. | .+ +|++||.+|||+|.-|..... +...++.+-..
T Consensus 280 ~pH~hp~A~Ei~~V~~G~~~v~vv~~~g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~-~~~~~v~f~~~ 357 (434)
T 2ea7_A 280 LPHYSSKAIVIMVINEGEAKIELVGLSDQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINAT-SNLNFFAFGIN 357 (434)
T ss_dssp EEEEESSCEEEEEEEESCEEEEEEEEEECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEES-SSEEEEEEEET
T ss_pred ccEEcCCCCEEEEEEeeEEEEEEEecCccccccccccCcceEEEEEEecCCcEEEECCCCeEEEEcC-CCeEEEEEECC
Confidence 3568999999999999999998643 3 45 799999999999999988765 46666665543
No 97
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=96.02 E-value=0.011 Score=58.79 Aligned_cols=46 Identities=22% Similarity=0.337 Sum_probs=38.8
Q ss_pred cCCCCEEEEEEeCeEEEEEec----ceEEecCCeEEEECCccEEEeeCCC
Q 019943 23 NADGDFLVVPQKGRLWIATEC----GKLEVSPGEIAVLPQGFRFAVSLPD 68 (333)
Q Consensus 23 n~DgDeL~~v~~G~l~l~te~----G~l~v~pGd~~VIPRG~~~Rv~~~~ 68 (333)
|.+++|++||++|++++..-. -.-.|++||+++||+|+.|.+.-.+
T Consensus 61 h~~A~ei~yV~~G~g~~g~V~~~~~~~~~l~~GDv~~~P~G~~h~~~N~g 110 (418)
T 3s7i_A 61 HADADNILVIQQGQATVTVANGNNRKSFNLDEGHALRIPSGFISYILNRH 110 (418)
T ss_dssp EESEEEEEEEEESEEEEEEECSSCEEEEEEETTEEEEECTTCEEEEEECC
T ss_pred eCCCCeEEEEEEeeEEEEEEecCCEEEEEecCCCEEEECCCCeEEEEecC
Confidence 678999999999999998732 2578999999999999999776533
No 98
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=95.96 E-value=0.011 Score=59.45 Aligned_cols=57 Identities=14% Similarity=0.247 Sum_probs=44.8
Q ss_pred ceecCCCCEEEEEEeCeEEEEEec--ce--EE--ecCCeEEEECCccEEEeeCCCCCeEEEEE
Q 019943 20 AFCNADGDFLVVPQKGRLWIATEC--GK--LE--VSPGEIAVLPQGFRFAVSLPDGPSRGYIA 76 (333)
Q Consensus 20 ~~~n~DgDeL~~v~~G~l~l~te~--G~--l~--v~pGd~~VIPRG~~~Rv~~~~~~~r~~ii 76 (333)
--.|..++|+++|.+|++++.... |. +. |++||++|||+|.-|.....++.+..+.+
T Consensus 337 pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~GDv~v~P~G~~H~~~ng~~~~~~l~~ 399 (459)
T 2e9q_A 337 PHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVREGQVLMIPQNFVVIKRASDRGFEWIAF 399 (459)
T ss_dssp EEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEE
T ss_pred ceECCCCCEEEEEEeeEEEEEEEeCCCCEEEeeEEeCCcEEEECCCCEEEEEeCCCCeEEEEE
Confidence 568999999999999999999865 32 43 99999999999999988763323444433
No 99
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=95.89 E-value=0.021 Score=49.33 Aligned_cols=67 Identities=13% Similarity=0.097 Sum_probs=47.6
Q ss_pred EEEEEEeeCCCCCCCceecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCC---CCCeEEEEE
Q 019943 5 FTCNRYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLP---DGPSRGYIA 76 (333)
Q Consensus 5 ~ai~~y~~~~sM~~~~~~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~---~~~~r~~ii 76 (333)
.++--|.++...+. -...|.|.++|++|++.+. |.| ..+++||++.+|.|..|++... +++|.++++
T Consensus 44 v~lvr~~pG~~~p~---H~H~g~ee~~VL~G~~~~~-e~~-~~~~~Gd~~~~P~g~~H~~~~~~~~~e~~~~~~~ 113 (159)
T 3ebr_A 44 ITLLKAPAGMEMPR---HHHTGTVIVYTVQGSWRYK-EHD-WVAHAGSVVYETASTRHTPQSAYAEGPDIITFNI 113 (159)
T ss_dssp EEEEEECSSCBCCC---EEESSCEEEEEEESCEEET-TSS-CCBCTTCEEEECSSEEECEEESSSSSSCEEEEEE
T ss_pred EEEEEECCCCCccc---ccCCCCEEEEEEEeEEEEe-CCC-eEECCCeEEEECCCCcceeEeCCCCCCCEEEEEE
Confidence 34444555655542 2234788889999998864 444 4799999999999999999775 346766664
No 100
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=95.88 E-value=0.04 Score=54.00 Aligned_cols=59 Identities=7% Similarity=0.025 Sum_probs=50.2
Q ss_pred CCceecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCCCCeEEEEEee
Q 019943 18 NCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEI 78 (333)
Q Consensus 18 ~~~~~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~ 78 (333)
.+.-+|.+. ++|+|.+|++..+.+..++++++||.+|||.+..|+.... +++.++.+..
T Consensus 292 t~~hRht~s-~Vy~V~eG~G~~~I~~~~~~w~~gD~fvvP~w~~h~~~n~-~~a~Lf~~~D 350 (368)
T 3nw4_A 292 TATRNEVGS-TVFQVFEGAGAVVMNGETTKLEKGDMFVVPSWVPWSLQAE-TQFDLFRFSD 350 (368)
T ss_dssp CCCEEESSC-EEEEEEESCEEEEETTEEEEECTTCEEEECTTCCEEEEES-SSEEEEEEES
T ss_pred cCCeecccc-EEEEEEeCcEEEEECCEEEEecCCCEEEECCCCcEEEEeC-CCEEEEEEeC
Confidence 456788855 9999999999999999999999999999999999999864 5777666653
No 101
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=95.66 E-value=0.045 Score=50.83 Aligned_cols=82 Identities=15% Similarity=0.045 Sum_probs=60.7
Q ss_pred ceeEEEEEEeeCCCCCCCceecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCC-CCCeEEEEEeecC
Q 019943 2 DMLFTCNRYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIAEIFG 80 (333)
Q Consensus 2 ~~~~ai~~y~~~~sM~~~~~~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~-~~~~r~~iiE~~g 80 (333)
||-+.+-......+++. -.+..-.+.+++++|++.+.......+|++||++.++.|..|.+..+ +++++.+++=-.+
T Consensus 190 ~~~~~~~~l~pG~~i~~--~~~h~~e~~~~il~G~~~~~~~~~~~~v~~GD~~~~~~~~~h~~~n~g~~~~~yl~~~d~n 267 (278)
T 1sq4_A 190 DMHVNIVNFEPGGVIPF--AETHVMEHGLYVLEGKAVYRLNQDWVEVEAGDFMWLRAFCPQACYSGGPGRFRYLLYKDVN 267 (278)
T ss_dssp SEEEEEEEECSSSEESC--CCCCSEEEEEEEEECEEEEEETTEEEEEETTCEEEEEESCCEEEECCSSSCEEEEEEEECS
T ss_pred CeEEEEEEECCCCCcCC--CCCCCccEEEEEEeCEEEEEECCEEEEeCCCCEEEECCCCCEEEEcCCCCCEEEEEEEEcC
Confidence 45555555555666541 12344568899999999999988889999999999999999998864 3456777766666
Q ss_pred Cceec
Q 019943 81 THFQL 85 (333)
Q Consensus 81 ~~~~l 85 (333)
.|..|
T Consensus 268 r~~~~ 272 (278)
T 1sq4_A 268 RHMRL 272 (278)
T ss_dssp SCCCC
T ss_pred CCccc
Confidence 76655
No 102
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=95.63 E-value=0.041 Score=55.53 Aligned_cols=58 Identities=21% Similarity=0.304 Sum_probs=45.3
Q ss_pred ceecCCCCEEEEEEeCeEEEEEec--ce--E--EecCCeEEEECCccEEEeeCCCCCeEEEEEe
Q 019943 20 AFCNADGDFLVVPQKGRLWIATEC--GK--L--EVSPGEIAVLPQGFRFAVSLPDGPSRGYIAE 77 (333)
Q Consensus 20 ~~~n~DgDeL~~v~~G~l~l~te~--G~--l--~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE 77 (333)
--.|..++||.||++|++++..-. |. + +|++||+.|||+|.-|-....++.+..+.+-
T Consensus 338 PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H~~~ag~e~~~~l~~f 401 (466)
T 3kgl_A 338 PQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQLLSIPQGFSVVKRATSEQFRWIEFK 401 (466)
T ss_dssp EEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEECSSEEEEEEEE
T ss_pred eeECCCCCEEEEEEeceEEEEEEeCCCcEEEEeEecCCcEEEECCCCeEEEEcCCCCEEEEEEE
Confidence 557899999999999999998765 43 3 3999999999999999886544344444443
No 103
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=95.55 E-value=0.058 Score=50.58 Aligned_cols=73 Identities=8% Similarity=-0.046 Sum_probs=56.6
Q ss_pred ceeEEEEEEeeCCCCCCCceecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCC-CCeEEEEE
Q 019943 2 DMLFTCNRYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPD-GPSRGYIA 76 (333)
Q Consensus 2 ~~~~ai~~y~~~~sM~~~~~~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~-~~~r~~ii 76 (333)
||.+.+-.+....+.+ +--+....+-+++++|++.+........|++||++.|+.++.|...... ++.+-++-
T Consensus 185 d~~~~~~t~~PG~~~p--~~e~H~~eh~~~vL~G~g~y~l~~~~~~V~~GD~i~~~~~~~h~~~n~G~e~~~yl~y 258 (266)
T 4e2q_A 185 DFNIHTMDFQPGEFLN--VKEVHYNQHGLLLLEGQGIYRLGDNWYPVQAGDVIWMAPFVPQWYAALGKTRSRYLLY 258 (266)
T ss_dssp SEEEEEEEECTTCBCS--SCCCCSCCEEEEEEECEEEEEETTEEEEEETTCEEEECTTCCEEEEEESSSCEEEEEE
T ss_pred ceEEEEEEECCCcCcC--CceEcccceEEEEEeceEEEEECCEEEEecCCCEEEECCCCcEEEEeCCCCCEEEEEE
Confidence 5666666666666664 2234456689999999999999999999999999999999999987653 45555543
No 104
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=95.53 E-value=0.054 Score=55.04 Aligned_cols=68 Identities=16% Similarity=0.204 Sum_probs=48.8
Q ss_pred EEeeCCCCCCCceecCCCCEEEEEEeCeEEEEEec--ce--E--EecCCeEEEECCccEEEeeCCCCCeEEEEEe
Q 019943 9 RYTANKSMDNCAFCNADGDFLVVPQKGRLWIATEC--GK--L--EVSPGEIAVLPQGFRFAVSLPDGPSRGYIAE 77 (333)
Q Consensus 9 ~y~~~~sM~~~~~~n~DgDeL~~v~~G~l~l~te~--G~--l--~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE 77 (333)
+.-.-..|- .--.|.+++||.||++|++++..-. |. + +|++||+.|||+|.-|-....++.+..+.+-
T Consensus 363 v~L~pGgm~-~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H~~~a~~e~~~~l~f~ 436 (496)
T 3ksc_A 363 GSLHKNAMF-VPHYNLNANSIIYALKGRARLQVVNCNGNTVFDGELEAGRALTVPQNYAVAAKSLSDRFSYVAFK 436 (496)
T ss_dssp EEEETTCEE-EEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEECSSEEEEEEEE
T ss_pred EEeeCCeEE-CCeeCCCCCEEEEEEeceEEEEEEeCCCcEEEEEEecCCeEEEECCCCEEEEEeCCCCEEEEEEE
Confidence 333334552 3558899999999999999998865 33 3 3899999999999999765543344444443
No 105
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=95.45 E-value=0.053 Score=53.50 Aligned_cols=59 Identities=15% Similarity=0.110 Sum_probs=44.8
Q ss_pred EEEEEEeeCCCCCCCceecCCCCEEEEEEeCeEEEEEec-ceEEecCCeEEEECCccEEEeeC
Q 019943 5 FTCNRYTANKSMDNCAFCNADGDFLVVPQKGRLWIATEC-GKLEVSPGEIAVLPQGFRFAVSL 66 (333)
Q Consensus 5 ~ai~~y~~~~sM~~~~~~n~DgDeL~~v~~G~l~l~te~-G~l~v~pGd~~VIPRG~~~Rv~~ 66 (333)
.++.+...+++.+ .=+|... |++||++|++...+.. .++.+++||+++||.|..|...-
T Consensus 125 a~~~~l~PG~~~~--~HrH~~~-ev~~IleG~G~~t~v~G~~~~~~~GD~i~~P~g~~H~~~N 184 (394)
T 3bu7_A 125 SGIQTMKAGERAG--AHRHAAS-ALRFIMEGSGAYTIVDGHKVELGANDFVLTPNGTWHEHGI 184 (394)
T ss_dssp EEEEEECTTCBCC--CEEESSC-EEEEEEECSCEEEEETTEEEEECTTCEEEECTTCCEEEEE
T ss_pred EEEEEECCCCCcC--CccCCcc-eEEEEEEeeEEEEEECCEEEEEcCCCEEEECcCCCEEEEc
Confidence 3444455555553 4466664 8999999999774444 56999999999999999999876
No 106
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=95.33 E-value=0.037 Score=50.35 Aligned_cols=59 Identities=10% Similarity=0.084 Sum_probs=43.6
Q ss_pred EeeCCCCCCCceecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCCCCeEEEEE
Q 019943 10 YTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIA 76 (333)
Q Consensus 10 y~~~~sM~~~~~~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~ii 76 (333)
|.++..++. -...+.|.++|++|++. ++.-.+.+||++.+|.|+.|++.. ++.|.+|+.
T Consensus 50 ~~pG~~~p~---H~H~g~Ee~~VL~G~f~----d~~~~~~~Gd~~~~P~g~~H~p~a-~~gc~~~vk 108 (223)
T 3o14_A 50 YAPGSRFSA---HTHDGGEEFIVLDGVFQ----DEHGDYPAGTYVRNPPTTSHVPGS-AEGCTIFVK 108 (223)
T ss_dssp ECTTEECCC---EECTTCEEEEEEEEEEE----ETTEEEETTEEEEECTTCEECCEE-SSCEEEEEE
T ss_pred ECCCCCccc---ccCCCCEEEEEEEeEEE----ECCeEECCCeEEEeCCCCccccEe-CCCCEEEEE
Confidence 344444442 23458999999999976 345689999999999999999987 445666654
No 107
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=95.20 E-value=0.031 Score=54.79 Aligned_cols=68 Identities=7% Similarity=-0.028 Sum_probs=48.5
Q ss_pred EEEEEEeeCCCCCCCceecCCCCEEEEEEeCeEE-EEEecceEEecCCeEEEECCccEEEeeCCC-CCeEEEE
Q 019943 5 FTCNRYTANKSMDNCAFCNADGDFLVVPQKGRLW-IATECGKLEVSPGEIAVLPQGFRFAVSLPD-GPSRGYI 75 (333)
Q Consensus 5 ~ai~~y~~~~sM~~~~~~n~DgDeL~~v~~G~l~-l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~-~~~r~~i 75 (333)
.++.+...+.+. ..=+|. .++++||++|++. ...+..++.+++||+++||.|..|+..-++ +++..+-
T Consensus 105 a~~~~l~PG~~~--~~HrH~-~~ev~~VleG~G~~~~vdG~~~~~~~GD~v~iP~g~~H~~~N~gde~l~~l~ 174 (368)
T 3nw4_A 105 AAIQYLGPRETA--PEHRHS-QNAFRFVVEGEGVWTVVNGDPVRMSRGDLLLTPGWCFHGHMNDTDQPMAWID 174 (368)
T ss_dssp EEEEEECTTCEE--EEEEES-SCEEEECSSCEEEEEEETTEEEEEETTCEEEECTTCCEEEEECSSSCEEEEE
T ss_pred EEEEEECCCCcc--Cceecc-cceEEEEEecceEEEEECCEEEEEeCCCEEEECCCCcEEeEeCCCCCeEEEE
Confidence 344444444443 244676 5699999999996 666667799999999999999999997643 3444443
No 108
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=95.12 E-value=0.051 Score=47.33 Aligned_cols=56 Identities=13% Similarity=0.143 Sum_probs=41.7
Q ss_pred EEeeCCCCCCCceecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCC
Q 019943 9 RYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPD 68 (333)
Q Consensus 9 ~y~~~~sM~~~~~~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~ 68 (333)
-|..+..++. -...+.|.++|++|++..+ +.|...+++||++.+|.|..|.+...+
T Consensus 49 r~~pG~~~p~---H~H~g~ee~~VL~G~f~~~-~~~~~~~~aGd~~~~P~g~~H~~~a~~ 104 (165)
T 3cjx_A 49 SFAPGLTLPL---HFHTGTVHMYTISGCWYYT-EYPGQKQTAGCYLYEPGGSIHQFNTPR 104 (165)
T ss_dssp EECTTCBCCE---EEESSCEEEEEEESEEEET-TCTTSCEETTEEEEECTTCEECEECCT
T ss_pred EECCCCcCCc---ccCCCCEEEEEEEEEEEEC-CCceEEECCCeEEEeCCCCceeeEeCC
Confidence 3445555441 2234889999999999873 333678899999999999999998754
No 109
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=95.11 E-value=0.059 Score=51.29 Aligned_cols=57 Identities=12% Similarity=0.110 Sum_probs=48.6
Q ss_pred ecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCCCCeEEEEEeec
Q 019943 22 CNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIF 79 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~~ 79 (333)
.....|-||.+++|+..++....+..+++||.+.||.|+.|.+...+ .+.++-|+-.
T Consensus 222 ~~~~~d~wiWqLEGss~Vt~~~q~~~L~~~DsLLIpa~~~y~~~r~~-gsv~L~I~~~ 278 (286)
T 2qnk_A 222 LRQNVDVWLWQLEGSSVVTMGGRRLSLAPDDSLLVLAGTSYAWERTQ-GSVALSVTQD 278 (286)
T ss_dssp CCCSSCEEEEEEESCEEEEETTEEEEECTTEEEEECTTCCEEEEECT-TCEEEEEEEC
T ss_pred ccCcCcEEEEEEcCceEEEECCeEEeccCCCEEEecCCCeEEEEecC-CeEEEEEEEC
Confidence 34455999999999999999999999999999999999999999744 5777776643
No 110
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=94.98 E-value=0.034 Score=54.85 Aligned_cols=51 Identities=22% Similarity=0.250 Sum_probs=40.4
Q ss_pred CCCCEEEEEEeCeEEEEEe----cceEEecCCeE------EEECCccEEEeeCCC--CCeEEE
Q 019943 24 ADGDFLVVPQKGRLWIATE----CGKLEVSPGEI------AVLPQGFRFAVSLPD--GPSRGY 74 (333)
Q Consensus 24 ~DgDeL~~v~~G~l~l~te----~G~l~v~pGd~------~VIPRG~~~Rv~~~~--~~~r~~ 74 (333)
.+++|++||++|++++..- .-...|++||+ ++||+|+.|.+.-.+ .+++.+
T Consensus 70 ~~a~ei~yVl~G~~~v~~v~~~~~~~~~l~~GDv~~~~~~~~iP~G~~h~~~N~g~~~~l~~i 132 (397)
T 2phl_A 70 ADAELLLVVRSGSAILVLVKPDDRREYFFLTSDNPIFSDHQKIPAGTIFYLVNPDPKEDLRII 132 (397)
T ss_dssp ESEEEEEEEEESEEEEEEEETTTEEEEEEEESSCTTSCSEEEECTTCEEEEEECCSSCCEEEE
T ss_pred cCCCeEEEEEeeeEEEEEEeCCCcEEEEECCCCcccccceEEECCCCcEEEEeCCCCCCeEEE
Confidence 4889999999999999863 12578999999 999999999886433 244444
No 111
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=94.85 E-value=0.069 Score=54.08 Aligned_cols=49 Identities=10% Similarity=0.070 Sum_probs=37.8
Q ss_pred cCCCCCCCCCCCCCCccceeEEeecccccccC----------CcCCCeeeeecCCCCCCC
Q 019943 198 VAEHTFRPPYYHRNCMSEFMGLIRGGYEAKAD----------GFLPGGASLHSCMTPHGP 247 (333)
Q Consensus 198 ~~~~t~rpPyyHrN~dsE~m~~i~G~y~a~~~----------g~~pG~~SlHp~g~pHGP 247 (333)
..+++..+|-+|.|. +|+++.+.|.....-. -+.+|-+-+-|.|++|..
T Consensus 374 l~pG~~~~pH~Hp~a-~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~GDv~vvP~G~~H~~ 432 (493)
T 2d5f_A 374 LYRNGIYSPHWNLNA-NSVIYVTRGKGRVRVVNAQGNAVFDGELRRGQLLVVPQNFVVAE 432 (493)
T ss_dssp ECTTCEEEEEEESSC-CEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEE
T ss_pred ccCCceeeeeECCCC-CEEEEEEeceEEEEEEcCCCCEEEeEEEcCCCEEEECCCCeEee
Confidence 568888899666665 7999999997643211 178999999999999974
No 112
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=94.72 E-value=0.086 Score=53.56 Aligned_cols=47 Identities=13% Similarity=0.133 Sum_probs=37.5
Q ss_pred cCCCCCCCCCCCCCCccceeEEeeccccc-------cc---CCcCCCeeeeecCCCCC
Q 019943 198 VAEHTFRPPYYHRNCMSEFMGLIRGGYEA-------KA---DGFLPGGASLHSCMTPH 245 (333)
Q Consensus 198 ~~~~t~rpPyyHrN~dsE~m~~i~G~y~a-------~~---~g~~pG~~SlHp~g~pH 245 (333)
..++++++|-+|.| .+|+++++.|.-.. ++ .-+.+|-+..-|.|.+|
T Consensus 365 L~pGgm~~PHwHp~-A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H 421 (496)
T 3ksc_A 365 LHKNAMFVPHYNLN-ANSIIYALKGRARLQVVNCNGNTVFDGELEAGRALTVPQNYAV 421 (496)
T ss_dssp EETTCEEEEEEESS-CCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEE
T ss_pred eeCCeEECCeeCCC-CCEEEEEEeceEEEEEEeCCCcEEEEEEecCCeEEEECCCCEE
Confidence 56999999999988 46999999986432 10 12689999999999999
No 113
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=94.62 E-value=0.051 Score=48.21 Aligned_cols=53 Identities=15% Similarity=0.234 Sum_probs=43.3
Q ss_pred CCEEEEEEeCeEEEEEecce---------------------EEecCCeEEEECCccEEEeeCCCCCeEEEEEeecC
Q 019943 26 GDFLVVPQKGRLWIATECGK---------------------LEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG 80 (333)
Q Consensus 26 gDeL~~v~~G~l~l~te~G~---------------------l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~~g 80 (333)
-.|=|.+..|.+.|..+.+. +.++|||.+.||.|+.|+.... +.-.+|.|...
T Consensus 80 K~E~~ivr~G~v~l~~~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvtIppg~~H~f~ag--eegvli~EvSt 153 (175)
T 2y0o_A 80 KQETFRCRYGKVYLYVEGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYTIPPNTKHWFQAG--EEGAVVTEMSS 153 (175)
T ss_dssp CCEEEEEEEEEEEEEESSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEEECTTCCEEEEEE--EEEEEEEEEEE
T ss_pred CceeEEEecCEEEEEECCccccCcceeccCCceeeecCCcEEEECCCCEEEECCCCcEEEEeC--CCCEEEEEEeC
Confidence 67888899999999987655 5999999999999999999861 22277888753
No 114
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=94.56 E-value=0.08 Score=53.37 Aligned_cols=53 Identities=23% Similarity=0.381 Sum_probs=42.3
Q ss_pred CCCCCCCceecCCCCEEEEEEeCeEEEEEec--ce--EE--ecCCeEEEECCccEEEeeC
Q 019943 13 NKSMDNCAFCNADGDFLVVPQKGRLWIATEC--GK--LE--VSPGEIAVLPQGFRFAVSL 66 (333)
Q Consensus 13 ~~sM~~~~~~n~DgDeL~~v~~G~l~l~te~--G~--l~--v~pGd~~VIPRG~~~Rv~~ 66 (333)
-..|- .--.|..++||+||++|++++..-. |. +. |++||+.|||+|.-|-...
T Consensus 332 pGgm~-~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~~GDVfvvP~g~~h~~~a 390 (465)
T 3qac_A 332 RNAMM-APHYNLNAHNIMYCVRGRGRIQIVNDQGQSVFDEELSRGQLVVVPQNFAIVKQA 390 (465)
T ss_dssp TTCEE-EEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEE
T ss_pred CCcEe-eeEECCCCCEEEEEEeCCEEEEEEeCCCcEEEEEEecCCeEEEECCCcEEEEEc
Confidence 34452 3458999999999999999998764 33 33 8999999999999997764
No 115
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=94.55 E-value=0.097 Score=53.31 Aligned_cols=49 Identities=12% Similarity=0.163 Sum_probs=38.3
Q ss_pred cCCCCCCCCCCCCCCccceeEEeeccccccc---C-------CcCCCeeeeecCCCCCCC
Q 019943 198 VAEHTFRPPYYHRNCMSEFMGLIRGGYEAKA---D-------GFLPGGASLHSCMTPHGP 247 (333)
Q Consensus 198 ~~~~t~rpPyyHrN~dsE~m~~i~G~y~a~~---~-------g~~pG~~SlHp~g~pHGP 247 (333)
..+++.++|-+|.|. +|+++.+.|.....- . -+.+|-+.+-|.|++|.-
T Consensus 379 L~PG~~~~pH~Hp~a-~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~GDv~viP~G~~H~~ 437 (510)
T 3c3v_A 379 LYRNALFVPHYNTNA-HSIIYALRGRAHVQVVDSNGNRVYDEELQEGHVLVVPQNFAVAG 437 (510)
T ss_dssp EETTCEEEEEEESSC-CEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEE
T ss_pred ecCCceecceECCCC-CEEEEEEeCEEEEEEEeCCCCEEEeEEEcCCcEEEECCCCeEEE
Confidence 568889999777765 799999999764321 1 178999999999999964
No 116
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=94.01 E-value=0.15 Score=50.93 Aligned_cols=57 Identities=19% Similarity=0.255 Sum_probs=44.1
Q ss_pred ceecCCCCEEEEEEeCeEEEEEec--c--------------eEEecCCeEEEECCccEEEeeCCCCCeEEEEEe
Q 019943 20 AFCNADGDFLVVPQKGRLWIATEC--G--------------KLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAE 77 (333)
Q Consensus 20 ~~~n~DgDeL~~v~~G~l~l~te~--G--------------~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE 77 (333)
--.|..++|+.+|.+|+++++.-. | .-+|++||++|||+|.-|-.... +....+.+.
T Consensus 296 PH~hp~A~ei~~V~~G~~~v~vv~~~~~~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h~~~n~-~~~~~v~f~ 368 (445)
T 2cav_A 296 PHYNSRATVILVANEGRAEVELVGLEQQQQQGLESMQLRRYAATLSEGDIIVIPSSFPVALKAA-SDLNMVGIG 368 (445)
T ss_dssp EEEESSCEEEEEEEESCEEEEEEEC-----------CCEEEEEEECTTCEEEECTTCCEEEEES-SSEEEEEEE
T ss_pred eEECCCCcEEEEEEeeEEEEEEEeCCCcccccccCcceEEEEeEecCCcEEEEcCCcEEEEEcC-CCeEEEEEE
Confidence 458999999999999999998653 2 23499999999999999987765 444444443
No 117
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=93.65 E-value=0.28 Score=46.47 Aligned_cols=54 Identities=20% Similarity=0.281 Sum_probs=41.9
Q ss_pred eecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEE---EeeCCCCCeEEEEEeecCC
Q 019943 21 FCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRF---AVSLPDGPSRGYIAEIFGT 81 (333)
Q Consensus 21 ~~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~---Rv~~~~~~~r~~iiE~~g~ 81 (333)
+.++|.+ +||++|++.+ |.-.+..|.|..||+||+. ++ +-..++.+|++|..+.
T Consensus 108 i~~ad~E--~fVL~G~i~~----G~~~l~~h~Y~f~PaGV~~~~~kv-~~~~g~~iL~fe~g~~ 164 (303)
T 2qdr_A 108 IFTADLE--IFVIKGAIQL----GEWQLNKHSYSFIPAGVRIGSWKV-LGGEEAEILWMENGSV 164 (303)
T ss_dssp EESSCEE--EEEEESEEEE----TTEEECTTEEEEECTTCCBCCEEE-ETTSCEEEEEEECSSS
T ss_pred ccccceE--EEEEEeEEEe----CCEEecCCceEEecCCCccCceee-cCCCCcEEEEEecCCc
Confidence 3455554 9999998865 8889999999999999965 33 2244889999998765
No 118
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=93.22 E-value=0.24 Score=49.10 Aligned_cols=57 Identities=14% Similarity=0.162 Sum_probs=43.7
Q ss_pred ceecCCCCEEEEEEeCeEEEEEec--c----------------------------eEEecCCeEEEECCccEEEeeCCCC
Q 019943 20 AFCNADGDFLVVPQKGRLWIATEC--G----------------------------KLEVSPGEIAVLPQGFRFAVSLPDG 69 (333)
Q Consensus 20 ~~~n~DgDeL~~v~~G~l~l~te~--G----------------------------~l~v~pGd~~VIPRG~~~Rv~~~~~ 69 (333)
--+|..+.|+++|++|++++..-. | .-+|++||++|||+|.-|-... ++
T Consensus 278 PH~~p~A~ei~yV~~G~g~v~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~~~~~-~~ 356 (418)
T 3s7i_A 278 PHFNSKAMVIVVVNKGTGNLELVAVRKEQQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDVFIMPAAHPVAINA-SS 356 (418)
T ss_dssp EEEESSCEEEEEEEECCEEEEEEEEEEC-------------------CCEEEEEEEEEECTTCEEEECTTCCEEEEE-SS
T ss_pred ceecCCCCEEEEEEeCeEEEEEEeCCCccccccccccccccccccccccccceEEEeeeCCCCEEEECCCCEEEEEC-CC
Confidence 447888899999999999987653 2 2458999999999999998765 44
Q ss_pred CeEEEEEe
Q 019943 70 PSRGYIAE 77 (333)
Q Consensus 70 ~~r~~iiE 77 (333)
+...+.+.
T Consensus 357 ~l~~v~f~ 364 (418)
T 3s7i_A 357 ELHLLGFG 364 (418)
T ss_dssp CEEEEEEE
T ss_pred CEEEEEEE
Confidence 54444443
No 119
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=89.11 E-value=1.8 Score=40.72 Aligned_cols=78 Identities=9% Similarity=-0.020 Sum_probs=53.8
Q ss_pred EEEEEEeeCCCCCCCceecC-CCCEEEEEEeCeEEEEEecceEEe-cC---------CeEEEECCccEEEeeCCCCCeEE
Q 019943 5 FTCNRYTANKSMDNCAFCNA-DGDFLVVPQKGRLWIATECGKLEV-SP---------GEIAVLPQGFRFAVSLPDGPSRG 73 (333)
Q Consensus 5 ~ai~~y~~~~sM~~~~~~n~-DgDeL~~v~~G~l~l~te~G~l~v-~p---------Gd~~VIPRG~~~Rv~~~~~~~r~ 73 (333)
+++.++...+- +.+-.+. +-+..++++.|.++++.+.....+ .. .|.+.||+|.+.++...+ ++++
T Consensus 29 ~~f~~~~L~~G--e~~~~~~~~~E~~iv~l~G~~~V~~~g~~~~~~g~R~svF~~~~p~~lYvp~g~~v~i~a~~-~~~~ 105 (270)
T 2qjv_A 29 VGFDVWQLXAG--ESITLPSDERERCLVLVAGLASVXAADSFFYRIGQRMSPFERIPAYSVYLPHHTEAXVTAET-DLEL 105 (270)
T ss_dssp CEEEEEEECTT--CEEEECCSSEEEEEEEEESCEEEEETTEEEEEECCCSSGGGCSCCCEEEECSSCCEEEEESS-SEEE
T ss_pred eEEEEEEecCC--CEEEecCCCcEEEEEEecceEEEEECCEEEeccccccccccCCCCcEEEECCCCEEEEEecC-CceE
Confidence 34555555442 2233333 445556889999999987665544 33 389999999999999855 7999
Q ss_pred EEEeecCCceecC
Q 019943 74 YIAEIFGTHFQLP 86 (333)
Q Consensus 74 ~iiE~~g~~~~lP 86 (333)
+|+-+. .+=++|
T Consensus 106 ~v~sAp-~~~~~p 117 (270)
T 2qjv_A 106 AVCSAP-GFGELP 117 (270)
T ss_dssp EEEEEE-CCSCCC
T ss_pred EEEeee-cCCcCC
Confidence 999987 444444
No 120
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=89.07 E-value=3.2 Score=35.15 Aligned_cols=70 Identities=4% Similarity=-0.007 Sum_probs=48.9
Q ss_pred EeeCCCCCCCceecCCCCEEEEEEeCeEEEEEecce----EEecCCe-EEEECCccEEEeeCCCCCeEEEEEeecCC
Q 019943 10 YTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGK----LEVSPGE-IAVLPQGFRFAVSLPDGPSRGYIAEIFGT 81 (333)
Q Consensus 10 y~~~~sM~~~~~~n~DgDeL~~v~~G~l~l~te~G~----l~v~pGd-~~VIPRG~~~Rv~~~~~~~r~~iiE~~g~ 81 (333)
|.......+..=+|....+++++.+|+.++...+|. +.+.... .+.||.|+=|.+...+.. .++++....
T Consensus 40 ~~~~~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldDg~~~~~~~L~~~~~gL~IppgvWh~~~~~s~~--avllvlas~ 114 (141)
T 2pa7_A 40 FDTKGEEPRGFHAHKKLEQVLVCLNGSCRVILDDGNIIQEITLDSPAVGLYVGPAVWHEMHDFSSD--CVMMVLASD 114 (141)
T ss_dssp ESCCSSCCEEEEEESSCCEEEEEEESCEEEEEECSSCEEEEEECCTTEEEEECTTCEEEEECCCTT--CEEEEEESS
T ss_pred EecCCCCEECcCcCCCceEEEEEEccEEEEEEECCcEEEEEEECCCCcEEEeCCCEEEEEEEcCCC--eEEEEECCC
Confidence 333344444444688899999999999999999985 4555444 488999999998765544 444444433
No 121
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=89.03 E-value=0.68 Score=42.91 Aligned_cols=57 Identities=12% Similarity=0.076 Sum_probs=42.9
Q ss_pred ceecCCCCEEEEEEeCeEEEEEe----cceEEecC-C---eEEEECCccEEEeeCCC-CCeEEEEE
Q 019943 20 AFCNADGDFLVVPQKGRLWIATE----CGKLEVSP-G---EIAVLPQGFRFAVSLPD-GPSRGYIA 76 (333)
Q Consensus 20 ~~~n~DgDeL~~v~~G~l~l~te----~G~l~v~p-G---d~~VIPRG~~~Rv~~~~-~~~r~~ii 76 (333)
.-.|.+..|++++.+|++++..+ .-...+.. | +.+.||+|..|-+.-.+ +++..+++
T Consensus 287 ~h~h~~~~e~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~~~~~ 352 (369)
T 3st7_A 287 NHWHHTKNEKFLVVSGKGVIRFRHVNDDEIIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTIMW 352 (369)
T ss_dssp EEECSSCCEEEEEEESEEEEEEEETTCCCCEEEEEETTBCCEEEECTTEEEEEEECSSSCEEEEEE
T ss_pred cccccCcceEEEEEeeeEEEEEEcCCCCcEEEEEecCCcceEEEeCCCceEEeEEcCCCcEEEEEe
Confidence 44577889999999999999543 33477777 8 89999999999987544 45544444
No 122
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=88.48 E-value=1.6 Score=43.39 Aligned_cols=63 Identities=13% Similarity=0.184 Sum_probs=45.6
Q ss_pred EEEEEEeeCC-CCCCCceecCCCCEEEEEEeCeEEEEEecc-e--EEecCCeEEEECCccEEEeeCC
Q 019943 5 FTCNRYTANK-SMDNCAFCNADGDFLVVPQKGRLWIATECG-K--LEVSPGEIAVLPQGFRFAVSLP 67 (333)
Q Consensus 5 ~ai~~y~~~~-sM~~~~~~n~DgDeL~~v~~G~l~l~te~G-~--l~v~pGd~~VIPRG~~~Rv~~~ 67 (333)
|++..+.... .-....+...++-.++++.+|+++|....+ . +.+++||.++||.+..+++.-.
T Consensus 357 F~v~~~~~~~~~~~~~~~~~~~~~~illv~~G~g~i~~~~~~~~~~~l~~G~~~fvpa~~~~~i~g~ 423 (440)
T 1pmi_A 357 FSVLQTIFDKSKGGKQVIEGLNGPSIVIATNGKGTIQITGDDSTKQKIDTGYVFFVAPGSSIELTAD 423 (440)
T ss_dssp CEEEEEECCTTTCCEEEECCCSSCEEEEEEESEEEEEETTCGGGCEEEETTCEEEECTTCCEEEEEC
T ss_pred EEEEEEEecCCCCceeEEecCCCcEEEEEEeCeEEEEeCCcccceEEeccCCEEEEeCCCcEEEEEe
Confidence 4555555442 111112346678889999999999998665 4 8999999999999987777653
No 123
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=88.26 E-value=1.1 Score=42.52 Aligned_cols=58 Identities=14% Similarity=0.281 Sum_probs=43.2
Q ss_pred EEEEEEeeCCCCCCCceecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCcc-EEEee
Q 019943 5 FTCNRYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGF-RFAVS 65 (333)
Q Consensus 5 ~ai~~y~~~~sM~~~~~~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~-~~Rv~ 65 (333)
|++..+..+... .+...++=.++++.+|++.|.+..+.+.+++||.++||.++ .+++.
T Consensus 251 F~~~~~~~~~~~---~~~~~~~~~il~v~~G~~~l~~~~~~~~l~~G~~~~vpa~~~~~~i~ 309 (319)
T 1qwr_A 251 FSVYKWDINGEA---EMAQDESFLICSVIEGSGLLKYEDKTCPLKKGDHFILPAQMPDFTIK 309 (319)
T ss_dssp CEEEEEEEEEEE---EECCCSSCEEEEEEEEEEEEEETTEEEEEETTCEEEECTTCCCEEEE
T ss_pred EEEEEEEECCce---EEccCCccEEEEEEcCeEEEEECCEEEEEcCCcEEEEeCCCceEEEE
Confidence 455555554332 23344677899999999999986556999999999999987 57774
No 124
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=88.22 E-value=0.44 Score=43.17 Aligned_cols=52 Identities=12% Similarity=0.165 Sum_probs=40.3
Q ss_pred CCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCCCCeEEEEEeecCCcee
Q 019943 25 DGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQ 84 (333)
Q Consensus 25 DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~~g~~~~ 84 (333)
.|.|+ ||++|++. .+.-++.+|+++-.|.|..|.+...+..|++||=. +|+.
T Consensus 165 gG~Ei-lVL~G~~~----d~~~~~~~GsWlR~P~gs~h~~~ag~~g~~i~~k~---ghl~ 216 (223)
T 3o14_A 165 GGIEV-LVLDGDVT----VNDEVLGRNAWLRLPEGEALSATAGARGAKIWMKT---GHLR 216 (223)
T ss_dssp SCEEE-EEEEEEEE----ETTEEECTTEEEEECTTCCEEEEEEEEEEEEEEEE---SGGG
T ss_pred CcEEE-EEEEeEEE----ECCceECCCeEEEeCCCCccCcEECCCCeEEEEEe---cCCC
Confidence 77886 99999975 44568999999999999999998734467776633 5663
No 125
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=88.18 E-value=2.3 Score=39.53 Aligned_cols=70 Identities=21% Similarity=0.265 Sum_probs=53.6
Q ss_pred EEEEEEeeCCCCCCCceecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCCCCeEEEEEeecC
Q 019943 5 FTCNRYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG 80 (333)
Q Consensus 5 ~ai~~y~~~~sM~~~~~~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~~g 80 (333)
|.|.+|..+.+=. +. + ..+-++..|.-+.-+-.+.|+|.|||-+.||.|+.|+.....+--.++|-|...
T Consensus 139 L~v~Ly~~~~~~~---~~--~-~~v~V~~DG~~~~~~aG~~i~L~PGESiTl~Pg~~H~F~ae~g~G~vligEVSt 208 (246)
T 3kmh_A 139 LIVELWNADSNEQ---TA--D-SDITVVIDGCRQKHTAGSQLRLSPGESICLPPGLYHSFWAEAGFGDVLVGEVSS 208 (246)
T ss_dssp EEEEEEEBCTTSS---BC--C-SCEEEEETTEEEEECTTCEEEECTTCEEEECTTEEEEEEECTTSCCEEEEEEEE
T ss_pred EEEEEEecCCCcc---cc--C-CCeEEecCCeEEEeCCCCEEEECCCCeEecCCCCEEEEEecCCCccEEEEEccc
Confidence 5677777766421 11 2 367788899998888899999999999999999999998744323588888764
No 126
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=86.58 E-value=1.4 Score=37.13 Aligned_cols=48 Identities=10% Similarity=0.015 Sum_probs=38.6
Q ss_pred CCEEEEEEeCeEEEEE--ecce------EEecCCeEEEECCccEEEeeCCCCCeEE
Q 019943 26 GDFLVVPQKGRLWIAT--ECGK------LEVSPGEIAVLPQGFRFAVSLPDGPSRG 73 (333)
Q Consensus 26 gDeL~~v~~G~l~l~t--e~G~------l~v~pGd~~VIPRG~~~Rv~~~~~~~r~ 73 (333)
-=+.+.|++|+++... +.|. +...+|+.++||.+.-|||++.++.++.
T Consensus 39 twg~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsdd~~f 94 (127)
T 3bb6_A 39 VYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTDDTYF 94 (127)
T ss_dssp EEEEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEESSTTCEE
T ss_pred EEEEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCceEECCCCcEEEEEcCCCEEE
Confidence 3488999999999874 5443 5688999999999999999975555555
No 127
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=86.31 E-value=1.6 Score=41.17 Aligned_cols=56 Identities=14% Similarity=0.241 Sum_probs=43.6
Q ss_pred EEEEEEeeCCCCCCCceecCCCC-EEEEEEeCeEEEEEecceEEecCCeEEEECCcc-EEEee
Q 019943 5 FTCNRYTANKSMDNCAFCNADGD-FLVVPQKGRLWIATECGKLEVSPGEIAVLPQGF-RFAVS 65 (333)
Q Consensus 5 ~ai~~y~~~~sM~~~~~~n~DgD-eL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~-~~Rv~ 65 (333)
|++..+..+.+. .+.. ++= .++++.+| +.|.+..+.+.+++||.++||.++ .+++.
T Consensus 230 F~v~~~~~~~~~---~~~~-~~~~~il~v~~G-~~i~~~~~~~~l~~G~~~~ipa~~~~~~i~ 287 (300)
T 1zx5_A 230 FGLEVVDVTGTA---EIKT-GGVMNILYAAEG-YFILRGKETADLHRGYSCLVPASTDSFTVE 287 (300)
T ss_dssp EEEEEEEEEEEE---EEEC-CSBCEEEEEEES-CEEEESSSEEEECTTCEEEECTTCCEEEEE
T ss_pred EEEEEEEECCce---EEec-CCceEEEEEccc-EEEEeCCeEEEEccceEEEEeCCCceEEEE
Confidence 566667665432 2344 676 79999999 999996667999999999999998 68774
No 128
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=85.74 E-value=1.9 Score=42.29 Aligned_cols=58 Identities=14% Similarity=0.174 Sum_probs=45.0
Q ss_pred EEEEEEeeCCCCCCCceecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCcc-EEEee
Q 019943 5 FTCNRYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGF-RFAVS 65 (333)
Q Consensus 5 ~ai~~y~~~~sM~~~~~~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~-~~Rv~ 65 (333)
|++..+..+.. ...+ ..++-.++++.+|++.|.+..+.+.+++||.++||.+. .++++
T Consensus 324 F~v~~~~l~~~--~~~~-~~~~~~il~v~~G~~~l~~~~~~~~l~~G~~~fvpa~~~~~~i~ 382 (394)
T 2wfp_A 324 FAFSLHDLALQ--ETSI-GQHSAAILFCVEGEAVLRKDEQRLVLKPGESAFIGADESPVNAS 382 (394)
T ss_dssp CEEEEEECCSS--CEEE-CCSSCEEEEEEEEEEEEEETTEEEEECTTCEEEECGGGCCEEEE
T ss_pred EEEEEEEEcCC--eEEe-cCCCcEEEEEEeceEEEEECCeEEEEccCcEEEEeCCCceEEEE
Confidence 56666766532 1123 56777999999999999987777999999999999984 67765
No 129
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=85.63 E-value=2 Score=35.90 Aligned_cols=47 Identities=13% Similarity=0.181 Sum_probs=37.4
Q ss_pred EEEEEEeCeEEEE--Eecce------EEecCCeEEEECCccEEEeeCCCCCeEEEE
Q 019943 28 FLVVPQKGRLWIA--TECGK------LEVSPGEIAVLPQGFRFAVSLPDGPSRGYI 75 (333)
Q Consensus 28 eL~~v~~G~l~l~--te~G~------l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~i 75 (333)
-.+-|++|+|++. ++.|. +.+.+|+..+||...-|||++ .+.++..|
T Consensus 40 gkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~-sdD~~f~l 94 (119)
T 3dl3_A 40 GQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIEL-SDDAQFNI 94 (119)
T ss_dssp EEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEE-CTTCEEEE
T ss_pred EEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEE-CCCeEEEE
Confidence 3578999999998 44442 778999999999999999995 55666543
No 130
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=85.12 E-value=0.97 Score=39.09 Aligned_cols=50 Identities=12% Similarity=-0.033 Sum_probs=36.9
Q ss_pred CCCCEEEEEEeCeEEEEEec--ceEEecCCeEEEECCccEEEeeCCCCCeEE
Q 019943 24 ADGDFLVVPQKGRLWIATEC--GKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 73 (333)
Q Consensus 24 ~DgDeL~~v~~G~l~l~te~--G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~ 73 (333)
..+.|-++|++|++..+... ..-.+++|+|+.-|.|..|.+...++++-+
T Consensus 64 H~g~ee~~VL~G~~~~~~Gd~~~~~~~~aGsYv~ePpGs~H~p~~~~~~~~~ 115 (153)
T 3bal_A 64 HAGPGEYFLTKGKMEVRGGEQEGGSTAYAPSYGFESSGALHGKTFFPVESQF 115 (153)
T ss_dssp ESSCEEEEEEESEEEETTCGGGTSEEEESSEEEEECTTCEESCCEESSCEEE
T ss_pred CCCCEEEEEEEEEEEecCccccCccccCCCeEEEcCCCCcccceeCCCCeEE
Confidence 34677799999999875432 235678999999999999986544445533
No 131
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=83.86 E-value=1.3 Score=42.05 Aligned_cols=62 Identities=16% Similarity=0.225 Sum_probs=47.9
Q ss_pred CCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccE-EEeeCCC--CCeEEEEEeecCCceecC
Q 019943 24 ADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFR-FAVSLPD--GPSRGYIAEIFGTHFQLP 86 (333)
Q Consensus 24 ~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~-~Rv~~~~--~~~r~~iiE~~g~~~~lP 86 (333)
.+-+..++++.|.++|+.+...-.++.-|.+.||+|.+ ..+...+ .+++++|+-+. ++=.+|
T Consensus 77 ~~rE~~iV~lgG~~~V~vdg~~f~lg~~dalYVp~G~~~v~~as~d~~~~a~fav~sAP-a~~~~P 141 (289)
T 1ywk_A 77 ERRELGVINIGGPGFIEIDGAKETMKKQDGYYIGKETKHVRFSSENPDNPAKFYISCVP-AHHKYP 141 (289)
T ss_dssp TTEEEEEEECSSCEEEEETTEEEEECTTCEEEECTTCCCEEEEESCTTSCCCEEEEEEE-CSSCCC
T ss_pred CCcEEEEEEccCeEEEEECCEEEecCCCCEEEeCCCCeEEEEEecCCCCCeEEEEEccc-cCCCCC
Confidence 44455668889999999987777889999999999988 4444332 36999999998 455566
No 132
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=83.70 E-value=1.6 Score=41.40 Aligned_cols=62 Identities=16% Similarity=0.175 Sum_probs=48.1
Q ss_pred CCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccE-EEeeCCC--CCeEEEEEeecCCceecC
Q 019943 24 ADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFR-FAVSLPD--GPSRGYIAEIFGTHFQLP 86 (333)
Q Consensus 24 ~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~-~Rv~~~~--~~~r~~iiE~~g~~~~lP 86 (333)
.+-+..++++.|.+.|+.+.....++.-|.+.||+|.+ ..+...+ .+++++|+-+. +|=.+|
T Consensus 77 ~~rE~~iV~l~G~~~V~vdG~~f~lg~~dalYVp~g~~~v~~as~da~~~a~fav~sAP-a~~~~P 141 (282)
T 1xru_A 77 ERRELGVINIGGAGTITVDGQCYEIGHRDALYVGKGAKEVVFASIDTGTPAKFYYNCAP-AHTTYP 141 (282)
T ss_dssp TTEEEEEEECSSCEEEEETTEEEEECTTCEEEECTTCCCEEEEESCTTSCCCEEEEEEE-CSSCCC
T ss_pred CCcEEEEEEccCeEEEEECCEEEecCCCCEEEeCCCCeEEEEEecCCCCCeEEEEEccc-cCCCCC
Confidence 45556678889999999987777889999999999998 4444332 37999999998 455555
No 133
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=81.60 E-value=9.7 Score=33.43 Aligned_cols=72 Identities=15% Similarity=0.195 Sum_probs=48.4
Q ss_pred EEEEEEeeCCCCCCCceecCCCCEEEEEEeCeE-EEEE--ecceEE-------ecCCeE--EEECCccEEEeeCCCCCeE
Q 019943 5 FTCNRYTANKSMDNCAFCNADGDFLVVPQKGRL-WIAT--ECGKLE-------VSPGEI--AVLPQGFRFAVSLPDGPSR 72 (333)
Q Consensus 5 ~ai~~y~~~~sM~~~~~~n~DgDeL~~v~~G~l-~l~t--e~G~l~-------v~pGd~--~VIPRG~~~Rv~~~~~~~r 72 (333)
-+|+.--...+. ..|---+.||+++.+.|.. .|.. ++|..+ +..||. +|||+|+-+..+..+| ..
T Consensus 50 T~IYfLL~~g~~--S~~HRv~sdEiW~~~~G~pL~l~l~~~dg~~~~~~LG~dv~~Ge~pQ~vVP~G~wqaa~~~~g-~~ 126 (170)
T 1yud_A 50 SSIYFLLRTGEV--SHFHRLTADEMWYFHAGQSLTIYMISPEGELTTAQLGLDLAAGERPQFLVPKGCIFGSAMNQD-GF 126 (170)
T ss_dssp EEEEEEEETTCC--EEEEECSSCEEEEEEEESCEEEEEECTTSCEEEEEESSCTTTTEESCEEECTTCEEEEEESSS-SE
T ss_pred eEEEEEECCCCC--CeeEEcCCCEEEEEEcCCCEEEEEEcCCCCEEEEEeCCCcccCceeEEEECCCCEEEEEECCC-Cc
Confidence 355555555543 3454347999999999974 5554 455422 567998 9999999998876545 45
Q ss_pred EEEEeec
Q 019943 73 GYIAEIF 79 (333)
Q Consensus 73 ~~iiE~~ 79 (333)
.+|-+.-
T Consensus 127 ~LV~C~V 133 (170)
T 1yud_A 127 SLVGCMV 133 (170)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 5555554
No 134
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=79.17 E-value=8.2 Score=30.94 Aligned_cols=56 Identities=16% Similarity=0.122 Sum_probs=47.6
Q ss_pred ceecCCCCEEEEEEeCeEEEEEecc--eEEecCCeEEEECCccEEEeeCCCCCeEEEEEe
Q 019943 20 AFCNADGDFLVVPQKGRLWIATECG--KLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAE 77 (333)
Q Consensus 20 ~~~n~DgDeL~~v~~G~l~l~te~G--~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE 77 (333)
+-.+-+..|+-=++.|+++++.... -.++++||-..||.+..|++... +..-|+|+
T Consensus 35 ytF~T~~~E~M~vvsG~~~V~lpg~~ew~~~~aGesF~Vpans~F~l~v~--~~~~YlC~ 92 (94)
T 2oyz_A 35 YTFGTQAPERMTVVKGALVVKRVGEADWTTYSSGESFDVEGNSSFELQVK--DATAYLCE 92 (94)
T ss_dssp EEEEESSCEEEEEEESEEEEEETTCSSCEEEETTCEEEECSSEEEEEEES--SCEEEEEE
T ss_pred EEEcCCCeEEEEEEEeEEEEEcCCCCcCEEECCCCEEEECCCCEEEEEEc--ccEeEEEE
Confidence 4456778899999999999999865 49999999999999999999874 45678875
No 135
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=75.79 E-value=9.3 Score=34.02 Aligned_cols=58 Identities=12% Similarity=0.111 Sum_probs=43.1
Q ss_pred CCCCEEEEEEeCeEEEEE----ec-------ceEEecCCeEEEECC--ccEEEeeCCCCCeEEEEEeecCC
Q 019943 24 ADGDFLVVPQKGRLWIAT----EC-------GKLEVSPGEIAVLPQ--GFRFAVSLPDGPSRGYIAEIFGT 81 (333)
Q Consensus 24 ~DgDeL~~v~~G~l~l~t----e~-------G~l~v~pGd~~VIPR--G~~~Rv~~~~~~~r~~iiE~~g~ 81 (333)
..+..++.|++|+++.+. +. +...+++||.+.++. |-.|+|.-..+......|..|+.
T Consensus 97 H~~~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~~~~avsLHvY~~ 167 (208)
T 2gm6_A 97 HTVWGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDDRVSISIHVYGA 167 (208)
T ss_dssp CSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSSSCEEEEEEESS
T ss_pred CCcceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEeccCCCCCcEEEEEEEcC
Confidence 335889999999998754 22 357899999999999 99999983333345666667754
No 136
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=74.34 E-value=8 Score=39.60 Aligned_cols=47 Identities=13% Similarity=0.127 Sum_probs=37.8
Q ss_pred cCCCCCCCCCCCCCCccceeEEeeccccccc----------CCcCCCeeeeecCCCCC
Q 019943 198 VAEHTFRPPYYHRNCMSEFMGLIRGGYEAKA----------DGFLPGGASLHSCMTPH 245 (333)
Q Consensus 198 ~~~~t~rpPyyHrN~dsE~m~~i~G~y~a~~----------~g~~pG~~SlHp~g~pH 245 (333)
..++++++|-+|.| .+|+++++.|.....- ..+.+|-+.+-|.|++|
T Consensus 401 L~pGgm~~PHwHp~-A~Ei~yVl~G~~rv~~V~~~G~~v~~~~L~~GDV~v~P~G~~H 457 (531)
T 3fz3_A 401 FYRNGIYSPHWNVN-AHSVVYVIRGNARVQVVNENGDAILDQEVQQGQLFIVPQNHGV 457 (531)
T ss_dssp ECTTCEEEEEEESS-CCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEE
T ss_pred eecCccccceEcCC-CCEEEEEEeCcEEEEEEeCCCcEEEEEEecCCeEEEECCCCeE
Confidence 67999999988888 4699999999753110 13689999999999999
No 137
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=73.10 E-value=15 Score=31.75 Aligned_cols=55 Identities=16% Similarity=0.173 Sum_probs=40.3
Q ss_pred CCEEEEEEeCeEEEEE---ec------ceEEecCCeEEEECCccEEEeeCCCCCeEEEEEeecCC
Q 019943 26 GDFLVVPQKGRLWIAT---EC------GKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGT 81 (333)
Q Consensus 26 gDeL~~v~~G~l~l~t---e~------G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~~g~ 81 (333)
...++.|++|+++-+. .. +...+++||..+.|++-.|||.-... .....|=.|+.
T Consensus 90 s~~~~~VL~G~l~e~~y~~~~~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~-~~aVSlHvY~p 153 (171)
T 3eqe_A 90 SIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMSNPTS-ERMVSLHVYSP 153 (171)
T ss_dssp CEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTCEEEEECCSS-SCEEEEEEEES
T ss_pred ceEEEEEEeeeEEEEEeecCCCceeecceEEeCCCcEEEeCCCCEEEEECCCC-CCEEEEEEeCC
Confidence 3567779999998753 12 36789999999999999999986443 34555556643
No 138
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=71.89 E-value=9.8 Score=35.11 Aligned_cols=50 Identities=16% Similarity=0.271 Sum_probs=39.6
Q ss_pred EEEEEEeCeEEEEEec-ceEEecCCeEEEECCccEEEeeCCCCCeEEEEEee
Q 019943 28 FLVVPQKGRLWIATEC-GKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEI 78 (333)
Q Consensus 28 eL~~v~~G~l~l~te~-G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~ 78 (333)
-+++|.+|++.|.-+. +...+.+||.++|-.+..-++.. ..+++++|+|.
T Consensus 204 ~~l~v~~G~v~v~g~~~~~~~l~~gd~~~l~~~~~l~l~a-~~~a~~LL~dl 254 (256)
T 2vec_A 204 AYLQSIHGKFHALTHHEEKAALTCGDGAFIRDEANITLVA-DSPLRALLIDL 254 (256)
T ss_dssp EEEEEEESCEEEEETTEEEEEECTTCEEEEESCSEEEEEE-SSSEEEEEEEE
T ss_pred EEEEEEECEEEECCccccceEECCCCEEEECCCCeEEEEe-CCCCEEEEEEe
Confidence 5668899999996421 23679999999998888778876 45799999985
No 139
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=70.92 E-value=1 Score=38.78 Aligned_cols=48 Identities=17% Similarity=0.093 Sum_probs=36.2
Q ss_pred cCCCCCCCCCCCCCCccceeEEeeccccc--------ccCCcCCCeeeeecCCCCCCC
Q 019943 198 VAEHTFRPPYYHRNCMSEFMGLIRGGYEA--------KADGFLPGGASLHSCMTPHGP 247 (333)
Q Consensus 198 ~~~~t~rpPyyHrN~dsE~m~~i~G~y~a--------~~~g~~pG~~SlHp~g~pHGP 247 (333)
..|++.++|. |.|. .|+++.+.|...- +...+.+|-+-.-|.|++|.-
T Consensus 48 l~pg~~~~pH-h~~a-~E~~yVl~G~~~v~v~~~~~~~~~~l~~GDv~~~P~g~~H~~ 103 (178)
T 1dgw_A 48 SKPNTLLLPH-HSDS-DLLVLVLEGQAILVLVNPDGRDTYKLDQGDAIKIQAGTPFYL 103 (178)
T ss_dssp ECTTEEEEEE-EESS-EEEEEEEESEEEEEEEETTEEEEEEEETTEEEEECTTCCEEE
T ss_pred ecCCcEecCc-CCCC-CEEEEEEeEEEEEEEEeCCCcEEEEECCCCEEEECCCCeEEE
Confidence 4677888886 6553 5999999997542 222489999999999999954
No 140
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=69.26 E-value=24 Score=29.04 Aligned_cols=57 Identities=9% Similarity=0.041 Sum_probs=48.6
Q ss_pred ceecCCCCEEEEEEeCeEEEEEecc--eEEecCCeEEEECCccEEEeeCCCCCeEEEEEee
Q 019943 20 AFCNADGDFLVVPQKGRLWIATECG--KLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEI 78 (333)
Q Consensus 20 ~~~n~DgDeL~~v~~G~l~l~te~G--~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~ 78 (333)
+-.+-+.-|+.-|..|+++++.... -.++++||-..||....|++... +..-|+|+-
T Consensus 51 YtF~T~~~E~MevvsG~l~V~Lpg~~eW~~~~aGesF~VpanssF~lkv~--~~~~Y~C~y 109 (111)
T 3hqx_A 51 LTFETHVPERMEIISGECRVKIADSTESELFRAGQSFYVPGNSLFKIETD--EVLDYVCHL 109 (111)
T ss_dssp EEEECSSCEEEEEEESEEEEEETTCSSCEEEETTCEEEECTTCEEEEECS--SCEEEEEEE
T ss_pred eEEcCCCcEEEEEEEeEEEEEcCCcccCEEeCCCCEEEECCCCcEEEEEC--cceeEEEEc
Confidence 5557778899999999999999763 49999999999999999999974 477888863
No 141
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=67.22 E-value=5.4 Score=33.49 Aligned_cols=33 Identities=21% Similarity=0.223 Sum_probs=26.7
Q ss_pred ecCCCCEEEEEEeCeEEEEEecce-EEecCCeEE
Q 019943 22 CNADGDFLVVPQKGRLWIATECGK-LEVSPGEIA 54 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~te~G~-l~v~pGd~~ 54 (333)
.+..+|.++++.+|.+.+.++.|. ..+.+||++
T Consensus 109 ~g~~~~~ly~I~~G~v~v~~~~g~~~~l~~G~~f 142 (202)
T 3bpz_A 109 EGTIGKKMYFIQHGVVSVLTKGNKEMKLSDGSYF 142 (202)
T ss_dssp TTSBCCEEEEEEECEEEEECTTSCCEEEETTCEE
T ss_pred CCCcCCeEEEEeccEEEEEECCCeEEEEcCCCEe
Confidence 355678999999999999887765 567888876
No 142
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=66.89 E-value=11 Score=34.36 Aligned_cols=47 Identities=15% Similarity=0.170 Sum_probs=38.3
Q ss_pred EEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCCCCeEEEEEeec
Q 019943 28 FLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIF 79 (333)
Q Consensus 28 eL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~~ 79 (333)
-+++|.+|++.|. | ..+.+||.+++..+-.-++.. ..+++++|++..
T Consensus 183 ~~~~v~~G~v~v~---g-~~l~~gd~~~~~~~~~l~l~a-~~~a~~Ll~~~~ 229 (242)
T 1tq5_A 183 VWIQVVKGNVTIN---G-VKASTSDGLAIWDEQAISIHA-DSDSEVLLFDLP 229 (242)
T ss_dssp EEEEEEESEEEET---T-EEEETTCEEEEESCSCEEEEE-SSSEEEEEEEEC
T ss_pred EEEEEccCcEEEC---C-EEeCCCCEEEECCCCeEEEEe-CCCCEEEEEECC
Confidence 4578999999883 4 479999999998887778876 458999999864
No 143
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=63.94 E-value=5.1 Score=34.34 Aligned_cols=24 Identities=33% Similarity=0.473 Sum_probs=20.7
Q ss_pred eEEecCCeEEEECCccEEEeeCCC
Q 019943 45 KLEVSPGEIAVLPQGFRFAVSLPD 68 (333)
Q Consensus 45 ~l~v~pGd~~VIPRG~~~Rv~~~~ 68 (333)
...++|||++.||+|--|.|...+
T Consensus 202 ~~~l~pGD~LyiP~gW~H~V~~l~ 225 (235)
T 4gjz_A 202 SCILSPGEILFIPVKYWHYVRALD 225 (235)
T ss_dssp EEEECTTCEEEECTTCEEEEEESS
T ss_pred EEEECCCCEEEeCCCCcEEEEECC
Confidence 367999999999999999997543
No 144
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=58.32 E-value=36 Score=33.66 Aligned_cols=63 Identities=16% Similarity=0.232 Sum_probs=42.0
Q ss_pred EEEEEEeeCCCCCCCceecCCCCEEE-EEEeCeEEEEE-----------------ecc----eEEecCCeEEEECCccEE
Q 019943 5 FTCNRYTANKSMDNCAFCNADGDFLV-VPQKGRLWIAT-----------------ECG----KLEVSPGEIAVLPQGFRF 62 (333)
Q Consensus 5 ~ai~~y~~~~sM~~~~~~n~DgDeL~-~v~~G~l~l~t-----------------e~G----~l~v~pGd~~VIPRG~~~ 62 (333)
..+++|.....-. .+-.|-|.-..| +-.+|+=+... ++| ...++|||++.||+|.-|
T Consensus 139 ~~~n~y~~~~g~~-g~~~H~D~~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H 217 (442)
T 2xdv_A 139 VGSNVYITPAGSQ-GLPPHYDDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIH 217 (442)
T ss_dssp CEEEEEEECTTCB-CSCSEECSSEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEE
T ss_pred cccceEECCCCCC-CccceECCcceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceE
Confidence 4577787766432 233455554444 45578766662 011 478999999999999999
Q ss_pred EeeCCC
Q 019943 63 AVSLPD 68 (333)
Q Consensus 63 Rv~~~~ 68 (333)
.+...+
T Consensus 218 ~~~s~~ 223 (442)
T 2xdv_A 218 QADTPA 223 (442)
T ss_dssp EEECCS
T ss_pred EEEecC
Confidence 998754
No 145
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=56.13 E-value=11 Score=28.99 Aligned_cols=32 Identities=25% Similarity=0.398 Sum_probs=25.4
Q ss_pred ecCCCCEEEEEEeCeEEEEEecceEEecCCeEE
Q 019943 22 CNADGDFLVVPQKGRLWIATECGKLEVSPGEIA 54 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~ 54 (333)
.+...|.++++.+|.+++.... ...+.+||++
T Consensus 48 ~g~~~~~~y~i~~G~v~~~~~~-~~~~~~G~~~ 79 (138)
T 1vp6_A 48 IGEPGDRMFFVVEGSVSVATPN-PVELGPGAFF 79 (138)
T ss_dssp TTSCCCEEEEEEESCEEECSSS-CEEECTTCEE
T ss_pred CCCCcceEEEEEeeEEEEEeCC-cceECCCCEe
Confidence 3556789999999999997654 5678888875
No 146
>3hsh_A Endostatin, collagen alpha-1(XVIII) chain; extracellular matrix, basement membrane, collagen trimerization domain, folding, association; 1.80A {Homo sapiens} PDB: 3hon_A
Probab=55.40 E-value=1.7 Score=31.79 Aligned_cols=52 Identities=15% Similarity=0.245 Sum_probs=44.6
Q ss_pred EEEEeeCCCCCCCceecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEECC
Q 019943 7 CNRYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQ 58 (333)
Q Consensus 7 i~~y~~~~sM~~~~~~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPR 58 (333)
+.+|.--..|-+.+-+.++|...|+.-+++|-|+...|--.+.-|..+=|||
T Consensus 5 v~~~~t~~~M~~~~~~~~eGtL~yv~d~~eLyiRVr~Gwr~v~Lg~~ip~p~ 56 (56)
T 3hsh_A 5 VRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLPR 56 (56)
T ss_dssp EEEESSHHHHHHHGGGSCTTCEEEETTTTEEEEEETTEEEEECEEEEEECCC
T ss_pred eEEeecHHHHHhhcccCCCeeEEEEEecceEEEEEcCceeeeeecccccCCC
Confidence 4566666667667889999999999999999999999988888899998886
No 147
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=54.21 E-value=13 Score=28.38 Aligned_cols=33 Identities=24% Similarity=0.243 Sum_probs=21.6
Q ss_pred ecCCCCEEEEEEeCeEEEEE--ecc-------eEEecCCeEE
Q 019943 22 CNADGDFLVVPQKGRLWIAT--ECG-------KLEVSPGEIA 54 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~t--e~G-------~l~v~pGd~~ 54 (333)
.+..++.++++.+|.+++.. +.| .-.+.+||++
T Consensus 43 ~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~f 84 (142)
T 3mdp_A 43 ENSKADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIF 84 (142)
T ss_dssp TTSBCCEEEEEEESCEEEECC---------CEEEEECTTCEE
T ss_pred CCCCCCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEe
Confidence 35668899999999999964 344 2235666654
No 148
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=54.16 E-value=10 Score=35.86 Aligned_cols=57 Identities=21% Similarity=0.482 Sum_probs=41.4
Q ss_pred ceEEecCCeEEEECCccEEEeeCCCCCeEEEEEeecC---CceecCCCCCCCCCCCCCCCCccCCcc
Q 019943 44 GKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG---THFQLPDLGPIGANGLAAPRDFLVPTA 107 (333)
Q Consensus 44 G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~~g---~~~~lPe~GpiG~ngla~~RDf~~P~a 107 (333)
-.+.|+|||.+.||.|+-|..-. . .+++|.-. .-+|+=|++=+|..| ++|.++.+.+
T Consensus 158 n~v~l~pGd~~~ipaGt~HA~~~-G----~~~~Eiq~~SD~t~R~yDy~R~g~~g--~pr~lhv~~~ 217 (319)
T 1qwr_A 158 RRIKIKPGDFYYVPSGTLHALCK-G----ALVLETQQNSDATYRVYDYDRLDSNG--SPRELHFAKA 217 (319)
T ss_dssp EEEECCTTCEEEECTTCCEEECS-S----EEEEEEEESCCCCEEEECTTCBCTTS--CBCCCCHHHH
T ss_pred eEEEcCCCCEEEcCCCCceEecC-C----CeEEEEEeCCccEEEcccccccCCCC--CcccCCHHHH
Confidence 45899999999999999999853 1 33677632 348887777777554 5777666655
No 149
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=53.99 E-value=29 Score=28.40 Aligned_cols=55 Identities=13% Similarity=0.182 Sum_probs=46.2
Q ss_pred ceecCCCCEEEEEEeCeEEEEEec--ceEEecCCeEEEECCccEEEeeCCCCCeEEEEE
Q 019943 20 AFCNADGDFLVVPQKGRLWIATEC--GKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIA 76 (333)
Q Consensus 20 ~~~n~DgDeL~~v~~G~l~l~te~--G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~ii 76 (333)
+-.+-+.-|+.-|+.|+++++... .-.++++||-..||....|++... +..-|+|
T Consensus 48 Y~F~T~~~E~MevvsG~l~V~LpG~~eW~~~~aGesF~VpanssF~lkv~--~~t~Y~C 104 (106)
T 3eo6_A 48 YTLSSEVAETIRVLSGMAYYHAEGANDVQELHAGDSMVIPANQSYRLEVM--EPLDYLL 104 (106)
T ss_dssp EEECCSSCEEEEEEEEEEEEECTTCSSCEEEETTCEEEECSSSCEEEEEE--EEEEEEE
T ss_pred EEecCCCcEEEEEEEeEEEEECCCCccCEEECCCCEEEECCCCcEEEEEC--ceEEEEE
Confidence 556777889999999999999876 359999999999999999999873 3566766
No 150
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=52.70 E-value=15 Score=30.50 Aligned_cols=33 Identities=24% Similarity=0.179 Sum_probs=26.2
Q ss_pred ecCCCCEEEEEEeCeEEEEEecce--EEecCCeEE
Q 019943 22 CNADGDFLVVPQKGRLWIATECGK--LEVSPGEIA 54 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~te~G~--l~v~pGd~~ 54 (333)
.+..+|.++++.+|.+.+..+.|. -.+++||++
T Consensus 108 ~G~~~~~ly~I~~G~v~~~~~~g~~~~~l~~G~~f 142 (198)
T 2ptm_A 108 EGTFGDRMFFIQQGIVDIIMSDGVIATSLSDGSYF 142 (198)
T ss_dssp TTSCCSEEEEEEECCEEEECTTSCEEEEECTTCEE
T ss_pred CCCcCcEEEEEEeCEEEEEecCCeEEEEecCCCEe
Confidence 356788999999999999987775 347777765
No 151
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=52.23 E-value=37 Score=31.40 Aligned_cols=52 Identities=10% Similarity=0.013 Sum_probs=39.3
Q ss_pred CCCCEEEEEEeCeEEEEEecc-eEEecCCeEEEECC-c----cEEEeeCCCCCeEEEEEeec
Q 019943 24 ADGDFLVVPQKGRLWIATECG-KLEVSPGEIAVLPQ-G----FRFAVSLPDGPSRGYIAEIF 79 (333)
Q Consensus 24 ~DgDeL~~v~~G~l~l~te~G-~l~v~pGd~~VIPR-G----~~~Rv~~~~~~~r~~iiE~~ 79 (333)
++-.-+++|.+|++.|. | ...+.+||.+++-. | -..++... .+++++|+.-.
T Consensus 186 ~~~~~~lyv~~G~v~v~---g~~~~l~~~d~~~~~~~~~~~~~~l~l~a~-~~a~~Ll~~G~ 243 (277)
T 2p17_A 186 GHYNGFLYILEGSGVFG---ADNIEGKAGQALFFSRHNRGEETELNVTAR-EKLRLLLYAGE 243 (277)
T ss_dssp TTCEEEEEEEESEEEET---TTTEEEETTEEEEECCCCTTCEEEEEEEES-SSEEEEEEEEC
T ss_pred CCCEEEEEEEeCeEEEC---CCceEeCCCcEEEEcCCCCCccceEEEEeC-CCcEEEEEecc
Confidence 33446779999998883 3 25799999999986 7 66777764 47999999854
No 152
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=50.95 E-value=21 Score=27.92 Aligned_cols=34 Identities=15% Similarity=0.108 Sum_probs=24.3
Q ss_pred ecCCCCEEEEEEeCeEEEEEecce-EEecCCeEEE
Q 019943 22 CNADGDFLVVPQKGRLWIATECGK-LEVSPGEIAV 55 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~te~G~-l~v~pGd~~V 55 (333)
.+...+.++++.+|.+++..+... -.+.+||++=
T Consensus 64 ~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~G~~fG 98 (160)
T 4f8a_A 64 AGESVDSLCFVVSGSLEVIQDDEVVAILGKGDVFG 98 (160)
T ss_dssp TTSBCCEEEEEEESEEEEEETTEEEEEEETTCEEE
T ss_pred CCCCccEEEEEEeeEEEEEECCEEEEEecCCCEeC
Confidence 355689999999999999774433 2366777654
No 153
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=50.09 E-value=21 Score=28.31 Aligned_cols=33 Identities=21% Similarity=0.281 Sum_probs=25.4
Q ss_pred EecCCeEEEECCccEEEeeCCCCCeEEEEEeecC
Q 019943 47 EVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG 80 (333)
Q Consensus 47 ~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~~g 80 (333)
+|++||++|||+|--+-..+.+ ....+-+++..
T Consensus 9 ~l~~G~v~vVPq~~~v~~~A~~-~le~v~F~tna 41 (93)
T 1dgw_Y 9 TLSEGDIIVIPSSFPVALKAAS-DLNMVGIGVNA 41 (93)
T ss_dssp EECTTCEEEECTTCCEEEEESS-SEEEEEEEESC
T ss_pred eecCCcEEEECCCCceeEEecC-CeEEEEEEecC
Confidence 5899999999999999887755 45565665553
No 154
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=49.39 E-value=12 Score=35.63 Aligned_cols=23 Identities=22% Similarity=0.531 Sum_probs=20.8
Q ss_pred eEEecCCeEEEECCccEEEeeCC
Q 019943 45 KLEVSPGEIAVLPQGFRFAVSLP 67 (333)
Q Consensus 45 ~l~v~pGd~~VIPRG~~~Rv~~~ 67 (333)
...++|||++.||+|.-|.+...
T Consensus 219 ~~~L~pGD~LyiP~gwwH~v~s~ 241 (342)
T 1vrb_A 219 IVNLTPGTMLYLPRGLWHSTKSD 241 (342)
T ss_dssp EEEECTTCEEEECTTCEEEEECS
T ss_pred EEEECCCcEEEeCCCccEEEEEC
Confidence 36899999999999999999875
No 155
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=48.80 E-value=9.1 Score=29.58 Aligned_cols=32 Identities=22% Similarity=0.122 Sum_probs=24.2
Q ss_pred cCCCCEEEEEEeCeEEEEEecce-EEecCCeEE
Q 019943 23 NADGDFLVVPQKGRLWIATECGK-LEVSPGEIA 54 (333)
Q Consensus 23 n~DgDeL~~v~~G~l~l~te~G~-l~v~pGd~~ 54 (333)
+...+.++++.+|.+++..+.|. ..+.+||++
T Consensus 55 g~~~~~~y~i~~G~v~~~~~~g~~~~l~~G~~f 87 (134)
T 2d93_A 55 GQELDSWYVILNGTVEISHPDGKVENLFMGNSF 87 (134)
T ss_dssp TCEECEEEECCBSCEEEECSSSCEEEECTTCEE
T ss_pred CCCCCeEEEEEeCEEEEEcCCCcEEEecCCCcc
Confidence 45578899999999999876665 346677754
No 156
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=47.86 E-value=29 Score=26.70 Aligned_cols=32 Identities=19% Similarity=0.391 Sum_probs=23.1
Q ss_pred ecCCCCEEEEEEeCeEEEEEecce--EEecCCeEE
Q 019943 22 CNADGDFLVVPQKGRLWIATECGK--LEVSPGEIA 54 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~te~G~--l~v~pGd~~ 54 (333)
.+...+.++++.+|.+++. ..|. -.+.+||++
T Consensus 60 ~g~~~~~~y~i~~G~v~~~-~~g~~~~~~~~G~~f 93 (139)
T 3ocp_A 60 EGDVGSLVYVMEDGKVEVT-KEGVKLCTMGPGKVF 93 (139)
T ss_dssp TTSCCCEEEEEEECCEEEE-ETTEEEEEECTTCEE
T ss_pred CCCcCCEEEEEEeCEEEEE-ECCEEEEEeCCCCEe
Confidence 3566899999999999994 4444 236667654
No 157
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=47.79 E-value=49 Score=27.68 Aligned_cols=53 Identities=17% Similarity=0.231 Sum_probs=35.9
Q ss_pred cCCCCEEEEEEeCeEEEE-Eecce----EEecCCeEEEECCccEEEeeCCCCCeEEEEEee
Q 019943 23 NADGDFLVVPQKGRLWIA-TECGK----LEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEI 78 (333)
Q Consensus 23 n~DgDeL~~v~~G~l~l~-te~G~----l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~ 78 (333)
....+.++++.+|.+++. ++.|. -.+.|||++=-|+ .+.+.+ ..++.++.|..
T Consensus 38 g~~~~~~y~i~~G~v~~~~~~~G~~~~~~~~~~G~~fG~~~--~~~~~A-~~~~~v~~i~~ 95 (222)
T 1ft9_A 38 EGDENGVFVVVDGRLRVYLVGEEREISLFYLTSGDMFCMHS--GCLVEA-TERTEVRFADI 95 (222)
T ss_dssp TCCCCCEEEEEESEEEEEEEETTEEEEEEEEETTCEEESCS--SCEEEE-SSCEEEEEECH
T ss_pred CCCCCeEEEEEecEEEEEECCCCCEEEEEEcCCCCEecCCC--CEEEEE-ccceEEEEEeH
Confidence 556789999999999994 35565 2478999887333 334443 23677777654
No 158
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=47.29 E-value=28 Score=27.52 Aligned_cols=33 Identities=18% Similarity=0.173 Sum_probs=23.3
Q ss_pred ecCCCCEEEEEEeCeEEEEEecce-EEecCCeEE
Q 019943 22 CNADGDFLVVPQKGRLWIATECGK-LEVSPGEIA 54 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~te~G~-l~v~pGd~~ 54 (333)
.+...+.++++.+|.+++..+... -.+.+||++
T Consensus 75 ~G~~~~~~y~i~~G~v~~~~~~~~~~~~~~G~~f 108 (154)
T 3pna_A 75 QGDEGDNFYVIDQGEMDVYVNNEWATSVGEGGSF 108 (154)
T ss_dssp TTSCCCEEEEEEESCEEEEETTEEEEEECTTCEE
T ss_pred CCCCCCeEEEEEecEEEEEECCEEEEEecCCCEe
Confidence 356689999999999999873322 236666654
No 159
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=46.36 E-value=81 Score=27.75 Aligned_cols=55 Identities=7% Similarity=-0.007 Sum_probs=39.0
Q ss_pred CCEEEEEEeCeEEEEE----e--------cceEEecCCeEEEE-CCccEEEeeCCCCCeEEEEEeecC
Q 019943 26 GDFLVVPQKGRLWIAT----E--------CGKLEVSPGEIAVL-PQGFRFAVSLPDGPSRGYIAEIFG 80 (333)
Q Consensus 26 gDeL~~v~~G~l~l~t----e--------~G~l~v~pGd~~VI-PRG~~~Rv~~~~~~~r~~iiE~~g 80 (333)
.--++.|++|+++-+. + .+...+++||...+ |++-.|||.-.......+=|=.|+
T Consensus 91 s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~~~~avSlHvY~ 158 (200)
T 3eln_A 91 SHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHTEPAVSLHLYS 158 (200)
T ss_dssp CEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCCSSCCEEEEEEEE
T ss_pred ceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCCCCCCEEEEEeCC
Confidence 4588999999998874 1 23578999999999 887799998543223344444554
No 160
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=45.26 E-value=75 Score=26.36 Aligned_cols=54 Identities=13% Similarity=0.127 Sum_probs=37.6
Q ss_pred ecCCCCEEEEEEeCeEEEE-Eecce----EEecCCeEEEECCccEEEeeCCCCCeEEEEEee
Q 019943 22 CNADGDFLVVPQKGRLWIA-TECGK----LEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEI 78 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~-te~G~----l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~ 78 (333)
.+...+.++++.+|.+++. ++.|. -.+.|||++=.|+...-+ + ..++.++.|..
T Consensus 41 ~g~~~~~~y~i~~G~v~~~~~~~G~~~~~~~~~~G~~~G~~~~~~~~--A-~~~~~v~~i~~ 99 (220)
T 2fmy_A 41 PNTERNLVFLVKSGRVRVYLAYEDKEFTLAILEAGDIFCTHTRAFIQ--A-MEDTTILYTDI 99 (220)
T ss_dssp TTCSSCEEEEEEESEEEEEEECSSCEEEEEEEETTCEEESCSSSEEE--E-SSSEEEEEEEH
T ss_pred CCCCCCeEEEEEecEEEEEECCCCCEEEEEEcCCCCEeCCccceEEE--E-cCcEEEEEEeH
Confidence 3566889999999999994 34564 347899988766554433 3 23677777764
No 161
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=43.32 E-value=96 Score=26.89 Aligned_cols=52 Identities=10% Similarity=0.110 Sum_probs=38.4
Q ss_pred ecCCCCEEEEEEeCeEEEEEecc-----------eEEec---CCeEEEECCccEEEeeCCCC-CeEE
Q 019943 22 CNADGDFLVVPQKGRLWIATECG-----------KLEVS---PGEIAVLPQGFRFAVSLPDG-PSRG 73 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~te~G-----------~l~v~---pGd~~VIPRG~~~Rv~~~~~-~~r~ 73 (333)
+|....+++.+.+|++.+...++ .+.|. +.-.+.||+|+-|-....++ .+-+
T Consensus 70 ~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd~~av~ 136 (174)
T 3ejk_A 70 RHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGDTPALV 136 (174)
T ss_dssp EESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTTSCEEE
T ss_pred ecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccCCCEEE
Confidence 44558899999999999887543 24455 67899999999998875454 4444
No 162
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=42.94 E-value=22 Score=33.27 Aligned_cols=47 Identities=13% Similarity=0.031 Sum_probs=34.5
Q ss_pred ceEEecCCeEEEECCccEEEeeCCCCCeEEEEEeecC-CceecCCCCCCCCCCCCCCCCccCCccc
Q 019943 44 GKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG-THFQLPDLGPIGANGLAAPRDFLVPTAW 108 (333)
Q Consensus 44 G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~~g-~~~~lPe~GpiG~ngla~~RDf~~P~a~ 108 (333)
-.+.|+|||.+.||.|+-|-.-. |.++|.-. +-..+ ++|.++.+.+.
T Consensus 158 n~v~l~pGd~~~ipaGt~HA~~~------G~~~Eiqa~SD~t~------------~pr~l~v~~~~ 205 (300)
T 1zx5_A 158 NTFETTPYDTFVIRPGIPHAGEG------LRVLEVSSNSTLAY------------FFNENDWEKVK 205 (300)
T ss_dssp EEEECCTTCEEEECTTCCEEEES------EEEEEEEESCCCCE------------ESSTTTHHHHH
T ss_pred ceeECCCCCEEEcCCCCceEcCC------CCeeeecccCCcee------------ecccCCHHHHH
Confidence 45889999999999999998853 55777743 22222 78877777664
No 163
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=41.87 E-value=9.9 Score=29.24 Aligned_cols=32 Identities=19% Similarity=0.277 Sum_probs=23.8
Q ss_pred cCCCCEEEEEEeCeEEEEE-ecceE------EecCCeEE
Q 019943 23 NADGDFLVVPQKGRLWIAT-ECGKL------EVSPGEIA 54 (333)
Q Consensus 23 n~DgDeL~~v~~G~l~l~t-e~G~l------~v~pGd~~ 54 (333)
++..+.++++.+|.+++.. +.|.- .+.+||++
T Consensus 44 G~~~~~~y~i~~G~v~~~~~~~g~~~~~~~~~l~~G~~f 82 (137)
T 1wgp_A 44 GDPVNEMLFIIRGRLESVTTDGGRSGFYNRSLLKEGDFC 82 (137)
T ss_dssp TSBCSEEEEEEECCCEEECCSSCSSSSSCEEECCTTCBS
T ss_pred CCCCCeEEEEEeeEEEEEEcCCCcceeeeeeeecCCCEe
Confidence 5567899999999999763 44542 67788865
No 164
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=41.15 E-value=28 Score=35.30 Aligned_cols=63 Identities=19% Similarity=0.181 Sum_probs=40.4
Q ss_pred EEEEEEeeCCCCCCCceecCCCCEEEEE-EeCeEEEEE--e--------------c---------ceEEecCCeEEEECC
Q 019943 5 FTCNRYTANKSMDNCAFCNADGDFLVVP-QKGRLWIAT--E--------------C---------GKLEVSPGEIAVLPQ 58 (333)
Q Consensus 5 ~ai~~y~~~~sM~~~~~~n~DgDeL~~v-~~G~l~l~t--e--------------~---------G~l~v~pGd~~VIPR 58 (333)
..+++|.....-. .+-.|-|--..|++ .+|+=+.+. . + =...++|||++.||+
T Consensus 164 v~~N~Y~tp~Gs~-g~~pH~D~~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~ 242 (489)
T 4diq_A 164 AGSNVYLTPPNSQ-GFAPHYDDIEAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPR 242 (489)
T ss_dssp EEEEEEEECSSBC-CSCCBCCSSEEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECT
T ss_pred ccceEEecCCCcc-cccCccCCcceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECC
Confidence 5677887765421 23356666555443 345433332 0 0 137899999999999
Q ss_pred ccEEEeeCCC
Q 019943 59 GFRFAVSLPD 68 (333)
Q Consensus 59 G~~~Rv~~~~ 68 (333)
|.-|.+...+
T Consensus 243 g~~H~~~s~~ 252 (489)
T 4diq_A 243 GFIHQAECQD 252 (489)
T ss_dssp TCEEEEEBCS
T ss_pred CCceEEEecC
Confidence 9999999864
No 165
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=41.12 E-value=32 Score=26.61 Aligned_cols=33 Identities=9% Similarity=-0.066 Sum_probs=23.6
Q ss_pred ecCCCCEEEEEEeCeEEEEE--ecce----EEecCCeEE
Q 019943 22 CNADGDFLVVPQKGRLWIAT--ECGK----LEVSPGEIA 54 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~t--e~G~----l~v~pGd~~ 54 (333)
.+...+.++++.+|.+++.. +.|. -.+.+||++
T Consensus 49 ~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 87 (154)
T 2z69_A 49 QGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTF 87 (154)
T ss_dssp TTSBCCEEEEEEESCEEEECCCC-----CCEEECTTEEE
T ss_pred CCCccceEEEEEeCEEEEEEECCCCCEEEEEEccCCCee
Confidence 35667899999999999974 3453 357888876
No 166
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=40.71 E-value=47 Score=26.25 Aligned_cols=33 Identities=21% Similarity=0.090 Sum_probs=22.8
Q ss_pred ecCCCCEEEEEEeCeEEEEE-ecce----EEecCCeEE
Q 019943 22 CNADGDFLVVPQKGRLWIAT-ECGK----LEVSPGEIA 54 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~t-e~G~----l~v~pGd~~ 54 (333)
.+..++.++++.+|.+++.. +.|. -.+.+||++
T Consensus 75 ~G~~~~~~y~i~~G~v~~~~~~~g~~~~~~~~~~G~~f 112 (161)
T 3idb_B 75 QGDDGDNFYVIDRGTFDIYVKCDGVGRCVGNYDNRGSF 112 (161)
T ss_dssp TTSCCCEEEEEEESEEEEEEEETTEEEEEEEEESCCEE
T ss_pred CCCCCcEEEEEEeCEEEEEEcCCCCeEEEEEcCCCCEe
Confidence 46678899999999999875 3343 235566643
No 167
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=38.56 E-value=32 Score=28.78 Aligned_cols=32 Identities=6% Similarity=0.062 Sum_probs=22.7
Q ss_pred cCCCCEEEEEEeCeEEEEEecce-EEecCCeEE
Q 019943 23 NADGDFLVVPQKGRLWIATECGK-LEVSPGEIA 54 (333)
Q Consensus 23 n~DgDeL~~v~~G~l~l~te~G~-l~v~pGd~~ 54 (333)
+..++.++++.+|.+.+..+... -.+++||++
T Consensus 113 G~~~~~ly~I~~G~v~v~~~~~~~~~l~~G~~f 145 (212)
T 3ukn_A 113 GDALQAIYFVCSGSMEVLKDNTVLAILGKGDLI 145 (212)
T ss_dssp TSBCCEEEEEEECCEEEESSSCEEEEECTTCEE
T ss_pred CCcccEEEEEEecEEEEEECCeEEEEecCCCCc
Confidence 45588999999999999864322 236666654
No 168
>3n3f_A Collagen alpha-1(XV) chain; extracellular matrix, basement membrane, collagen trimerization domain, folding, association, chain selection helix; 2.00A {Homo sapiens}
Probab=37.69 E-value=3.4 Score=29.97 Aligned_cols=51 Identities=18% Similarity=0.322 Sum_probs=42.4
Q ss_pred EEEEeeCCCCCCCceecCCCCEEEEEEeCeEEEEEecceEEecCCeEEEEC
Q 019943 7 CNRYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLP 57 (333)
Q Consensus 7 i~~y~~~~sM~~~~~~n~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIP 57 (333)
+.+|.-...|-+.+-+.++|...|+..+++|-|+...|--.+.-|+++-||
T Consensus 3 v~~~~t~~~M~~~~~~~~eGtL~yv~d~~eLyiRVr~Gwr~v~Lg~~ip~p 53 (54)
T 3n3f_A 3 VTAFSNMDDMLQKAHLVIEGTFIYLRDSTEFFIRVRDGWKKLQLGELIPIP 53 (54)
T ss_dssp EEEESSHHHHHTTGGGSCTTEEEEETTTTEEEEEETTEEEECCCCCCCCCC
T ss_pred ceEeecHHHHHhhCccCCCeeEEEEEecceEEEEEcCceeeeeccccccCC
Confidence 345666667767788999999999999999999999999888888876555
No 169
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=37.66 E-value=32 Score=32.58 Aligned_cols=24 Identities=17% Similarity=0.292 Sum_probs=21.3
Q ss_pred eEEecCCeEEEECCccEEEeeCCC
Q 019943 45 KLEVSPGEIAVLPQGFRFAVSLPD 68 (333)
Q Consensus 45 ~l~v~pGd~~VIPRG~~~Rv~~~~ 68 (333)
...++|||++.||+|--|.|...+
T Consensus 262 ~~~l~pGD~LyiP~gWwH~V~~l~ 285 (349)
T 3d8c_A 262 ETVVGPGDVLYIPMYWWHHIESLL 285 (349)
T ss_dssp EEEECTTCEEEECTTCEEEEEECT
T ss_pred EEEECCCCEEEECCCCcEEEEEcC
Confidence 378999999999999999998654
No 170
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=37.24 E-value=23 Score=33.36 Aligned_cols=23 Identities=13% Similarity=0.267 Sum_probs=20.6
Q ss_pred eEEecCCeEEEECCccEEEeeCC
Q 019943 45 KLEVSPGEIAVLPQGFRFAVSLP 67 (333)
Q Consensus 45 ~l~v~pGd~~VIPRG~~~Rv~~~ 67 (333)
...++|||++.||+|--|.|...
T Consensus 241 ~~~L~pGD~LyiP~gWwH~v~~l 263 (338)
T 3al5_A 241 ECSLEAGDVLFIPALWFHNVISE 263 (338)
T ss_dssp EEEECTTCEEEECTTCEEEEEES
T ss_pred EEEECCCCEEEECCCCeEEEeeC
Confidence 47799999999999999999864
No 171
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=36.84 E-value=30 Score=30.86 Aligned_cols=53 Identities=9% Similarity=0.119 Sum_probs=38.5
Q ss_pred CCEEEEEEeCeEEEEEe-cceEEecCCeEEEECCc--c-EEEeeCCCCCeEEEEEeec
Q 019943 26 GDFLVVPQKGRLWIATE-CGKLEVSPGEIAVLPQG--F-RFAVSLPDGPSRGYIAEIF 79 (333)
Q Consensus 26 gDeL~~v~~G~l~l~te-~G~l~v~pGd~~VIPRG--~-~~Rv~~~~~~~r~~iiE~~ 79 (333)
.--++|+++|.+.+... .....+.+||.+++=.. . ..++.. ++..+.++||..
T Consensus 140 ~~~~v~~l~G~~~v~~~~~~~~~L~~~d~l~~~~~~~~~~~~~~~-~g~~~~~~i~l~ 196 (200)
T 1yll_A 140 STLLLFAQQDGVAISLQGQPRGQLAAHDCLCAEGLQGLQHWRLTA-HEPAWVCAVELD 196 (200)
T ss_dssp SEEEEEESSSCEEEEETTEEEEEECTTCEEEEESCCSCEEEEEEE-EEEEEEEEEEEE
T ss_pred CEEEEEEccCcEEEEcCCCceeecCCCCEEEEeCCCccceeEecc-CCceEEEEEEEe
Confidence 44678899999999654 35689999999998443 3 235543 567888888875
No 172
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=35.64 E-value=38 Score=28.02 Aligned_cols=33 Identities=18% Similarity=0.234 Sum_probs=25.2
Q ss_pred ecCCCCEEEEEEeCeEEEEE--ecce----EEecCCeEE
Q 019943 22 CNADGDFLVVPQKGRLWIAT--ECGK----LEVSPGEIA 54 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~t--e~G~----l~v~pGd~~ 54 (333)
.....+.++++.+|.+++.. +.|. -.+.|||++
T Consensus 40 ~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 78 (220)
T 3dv8_A 40 GNMDCTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMC 78 (220)
T ss_dssp GGGCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEE
T ss_pred CCCCcceEEEEEeceEEEEEECCCCCEEEEEecCCCCee
Confidence 35667899999999999985 4564 346788885
No 173
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=34.61 E-value=49 Score=27.72 Aligned_cols=53 Identities=8% Similarity=0.042 Sum_probs=35.3
Q ss_pred cCCCCEEEEEEeCeEEEEEecc--eEEecCCeEEE-------ECCccEEEeeCCCCCeEEEEEee
Q 019943 23 NADGDFLVVPQKGRLWIATECG--KLEVSPGEIAV-------LPQGFRFAVSLPDGPSRGYIAEI 78 (333)
Q Consensus 23 n~DgDeL~~v~~G~l~l~te~G--~l~v~pGd~~V-------IPRG~~~Rv~~~~~~~r~~iiE~ 78 (333)
.+.+|.++++.+|.+++..... .-.+.+||++= .||..+- .+ ..++.++.|..
T Consensus 163 g~~~~~~y~I~~G~v~v~~~~~~~~~~l~~g~~fGe~~~~~~~~~~~~v--~a-~~~~~~~~i~~ 224 (246)
T 3of1_A 163 GDQGENFYLIEYGAVDVSKKGQGVINKLKDHDYFGEVALLNDLPRQATV--TA-TKRTKVATLGK 224 (246)
T ss_dssp TSBCCEEEEEEECEEEEEETTTEEEEEEETTCEECHHHHHHTCBCSSEE--EE-SSCEEEEEEEH
T ss_pred CCcCCEEEEEEecEEEEEEcCCceEEEcCCCCcccHHHHhCCCCcccEE--EE-CCCEEEEEEeH
Confidence 5678999999999999987664 24578888762 3444333 22 22566666654
No 174
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=34.24 E-value=42 Score=27.49 Aligned_cols=32 Identities=19% Similarity=0.220 Sum_probs=22.2
Q ss_pred cCCCCEEEEEEeCeEEEEE--ecce----EEecCCeEE
Q 019943 23 NADGDFLVVPQKGRLWIAT--ECGK----LEVSPGEIA 54 (333)
Q Consensus 23 n~DgDeL~~v~~G~l~l~t--e~G~----l~v~pGd~~ 54 (333)
....+.++++.+|.+++.. +.|. -.+.+||++
T Consensus 28 g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~ 65 (207)
T 2oz6_A 28 GDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFF 65 (207)
T ss_dssp TSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEE
T ss_pred CCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCc
Confidence 4557889999999999875 3353 235566654
No 175
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=32.73 E-value=43 Score=32.62 Aligned_cols=30 Identities=23% Similarity=0.328 Sum_probs=25.2
Q ss_pred eEEecCCeEEEECCccEEEeeCCCCCeEEEEEeecC
Q 019943 45 KLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG 80 (333)
Q Consensus 45 ~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~~g 80 (333)
.+.|+|||.+.||.|+-|-.- .|.++|.-.
T Consensus 241 ~v~l~pGd~~fipAG~~HAy~------~G~~~Eima 270 (394)
T 2wfp_A 241 VVKLNPGEAMFLFAETPHAYL------QGVALEVMA 270 (394)
T ss_dssp EEEECTTCEEEECTTCCEEEE------EEEEEEEEC
T ss_pred EEECCCCCEEEcCCCCceEcC------CCcEEEEec
Confidence 578999999999999999874 466888754
No 176
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=31.63 E-value=59 Score=24.73 Aligned_cols=32 Identities=28% Similarity=0.448 Sum_probs=23.3
Q ss_pred cCCCCEEEEEEeCeEEEEEe--cce----EEecCCeEE
Q 019943 23 NADGDFLVVPQKGRLWIATE--CGK----LEVSPGEIA 54 (333)
Q Consensus 23 n~DgDeL~~v~~G~l~l~te--~G~----l~v~pGd~~ 54 (333)
+...+.++++.+|.+++... .|. -.+.+||++
T Consensus 43 g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~ 80 (149)
T 2pqq_A 43 GDPGDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELI 80 (149)
T ss_dssp TSEECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEE
T ss_pred CCCCCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEe
Confidence 45578899999999998764 343 246777765
No 177
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=31.56 E-value=58 Score=26.44 Aligned_cols=56 Identities=11% Similarity=-0.155 Sum_probs=36.0
Q ss_pred cCCCCEEEEEEeCeEEEEE--ecce----EEecCCeEEE-EC---Cc--cEEEeeCCCCCeEEEEEeec
Q 019943 23 NADGDFLVVPQKGRLWIAT--ECGK----LEVSPGEIAV-LP---QG--FRFAVSLPDGPSRGYIAEIF 79 (333)
Q Consensus 23 n~DgDeL~~v~~G~l~l~t--e~G~----l~v~pGd~~V-IP---RG--~~~Rv~~~~~~~r~~iiE~~ 79 (333)
.+..+.++++.+|.+++.. +.|. -.+.|||++- +. .+ ..+.+.+ ..++.++.|...
T Consensus 45 G~~~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~ge~~~~~~~~~~~~~~~a-~~~~~v~~i~~~ 112 (194)
T 3dn7_A 45 GEICRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLSDYMAFQKQQPADFYIQS-VENCELLSITYT 112 (194)
T ss_dssp TSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEECCHHHHHHTCBCSSEEEE-SSCEEEEEEEHH
T ss_pred CCeeeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEeehHHHhcCCCCceEEEE-ECCEEEEEEeHH
Confidence 5567899999999999986 4564 2378999885 21 11 1233443 236777777643
No 178
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=31.38 E-value=63 Score=26.53 Aligned_cols=53 Identities=13% Similarity=0.068 Sum_probs=34.3
Q ss_pred cCCCCEEEEEEeCeEEEEE--ecce----EEecCCeEEEE-------CCccEEEeeCCCCCeEEEEEee
Q 019943 23 NADGDFLVVPQKGRLWIAT--ECGK----LEVSPGEIAVL-------PQGFRFAVSLPDGPSRGYIAEI 78 (333)
Q Consensus 23 n~DgDeL~~v~~G~l~l~t--e~G~----l~v~pGd~~VI-------PRG~~~Rv~~~~~~~r~~iiE~ 78 (333)
+...+.++++.+|.+++.. +.|. -.+.+||++=. |+. +.+.+ ..++.++.+..
T Consensus 37 g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~--~~~~a-~~~~~v~~i~~ 102 (216)
T 4ev0_A 37 GDLGQALYLVASGKVRLFRTHLGGQERTLALLGPGELFGEMSLLDEGERS--ASAVA-VEDTELLALFR 102 (216)
T ss_dssp TCBCCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEECHHHHHHCCBCS--SEEEE-SSSEEEEEEEH
T ss_pred CCCCCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEeehhhcCCCCcc--eEEEE-cCCEEEEEEcH
Confidence 4558899999999999986 3564 34788887632 322 23333 23566666654
No 179
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=31.36 E-value=98 Score=28.82 Aligned_cols=56 Identities=16% Similarity=0.130 Sum_probs=39.5
Q ss_pred CCCCEEEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCC-CCCeEEEEEeec
Q 019943 24 ADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIAEIF 79 (333)
Q Consensus 24 ~DgDeL~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~-~~~~r~~iiE~~ 79 (333)
++-.-+++|.+|++.+.-+.+.-.+.++..++...|-.-++... +.++|++|+.-.
T Consensus 188 ~~~~~~lyv~~G~v~v~g~~~~~~~~~~~~~~l~~gd~~~i~~~a~~~a~~LLl~G~ 244 (290)
T 1j1l_A 188 KGWTSFIYTISGDVYIGPDDAQQKIEPHHTAVLGEGDSVQVENKDPKRSHFVLIAGE 244 (290)
T ss_dssp TTCEEEEEEEESCEEESCTTSCEEECTTEEEEECSCSEEEEECCSSSCEEEEEEEEC
T ss_pred CCCEEEEEEEeCeEEECCcccceeccCceEEEecCCCEEEEEEcCCCCcEEEEEEcc
Confidence 34456679999999884322225677888888888877777642 457999999753
No 180
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=31.33 E-value=41 Score=28.20 Aligned_cols=33 Identities=24% Similarity=0.329 Sum_probs=24.5
Q ss_pred ecCCCCEEEEEEeCeEEEEEecce-EEecCCeEE
Q 019943 22 CNADGDFLVVPQKGRLWIATECGK-LEVSPGEIA 54 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~te~G~-l~v~pGd~~ 54 (333)
....+|.++++++|.+++..+... -.+.+||++
T Consensus 44 ~G~~~~~~y~i~~G~v~v~~~~~~~~~~~~g~~f 77 (246)
T 3of1_A 44 QGDQGDYFYVVEKGTVDFYVNDNKVNSSGPGSSF 77 (246)
T ss_dssp TTCCCCEEEEEEECCEEEESTTSCCEEECTTCEE
T ss_pred cCCCCCEEEEEEeeEEEEEECCEEEEecCCCCee
Confidence 456789999999999999864322 346777765
No 181
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=30.40 E-value=1.3e+02 Score=26.82 Aligned_cols=52 Identities=12% Similarity=0.124 Sum_probs=34.9
Q ss_pred CCCEEEEEEeCeE---EEEEecce--------EEe--cCCeEEEECCccEEEeeCCCCCeE-EEEE
Q 019943 25 DGDFLVVPQKGRL---WIATECGK--------LEV--SPGEIAVLPQGFRFAVSLPDGPSR-GYIA 76 (333)
Q Consensus 25 DgDeL~~v~~G~l---~l~te~G~--------l~v--~pGd~~VIPRG~~~Rv~~~~~~~r-~~ii 76 (333)
....|+.+.+|++ .+..+-|. ++| ..+-.+.||+|+-|-....++.+- .|.+
T Consensus 93 ~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~a~~~Y~~ 158 (205)
T 3ryk_A 93 AQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPHTIVMYKV 158 (205)
T ss_dssp CCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSSEEEEEEE
T ss_pred CceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCCEEEEEEc
Confidence 4789999999995 33333232 334 458899999999998865444443 3444
No 182
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=30.35 E-value=1.4e+02 Score=25.66 Aligned_cols=71 Identities=8% Similarity=0.029 Sum_probs=44.7
Q ss_pred EEEEEEeeCCCCCCCce-ecCCCCEEEEEEeCe-EEEEE--ecce---EEec----CCe--EEEECCccEEEeeCCCCCe
Q 019943 5 FTCNRYTANKSMDNCAF-CNADGDFLVVPQKGR-LWIAT--ECGK---LEVS----PGE--IAVLPQGFRFAVSLPDGPS 71 (333)
Q Consensus 5 ~ai~~y~~~~sM~~~~~-~n~DgDeL~~v~~G~-l~l~t--e~G~---l~v~----pGd--~~VIPRG~~~Rv~~~~~~~ 71 (333)
-||+.--...+. ..| |+.+.||+++-+.|. |.|.. +.|. ..|+ .|+ .+|||+|+=+.-+.. + .
T Consensus 41 TaIYfLL~~g~~--S~wHRv~~sdEiW~~h~G~pL~l~~~~~dg~~~~~~LG~d~~~Ge~pQ~vVP~G~WqaA~~~-g-~ 116 (154)
T 1znp_A 41 TAIYYLLEKGVR--SHWHRVTDAVEVWHYYAGAPIALHLSQDGREVQTFTLGPAILEGERPQVIVPANCWQSAESL-G-D 116 (154)
T ss_dssp EEEEEEEESSCC--EEEEEETTSCEEEEEEEESCEEEEEESSSSCCEEEEESSCTTTTEESEEEECTTCEEEEEES-S-S
T ss_pred eEEEEEecCCCC--CcceeccCCCEEEEeECCCCEEEEEEcCCCcEEEEEeCCCcccCcccEEEEcCCEEEEeeEC-C-C
Confidence 356655555543 344 555999999999996 66543 4453 3343 465 489999998876543 2 3
Q ss_pred EEEEEeec
Q 019943 72 RGYIAEIF 79 (333)
Q Consensus 72 r~~iiE~~ 79 (333)
-.||=+.-
T Consensus 117 ~~LVsCtV 124 (154)
T 1znp_A 117 FTLVGCTV 124 (154)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEe
Confidence 45555544
No 183
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=29.96 E-value=19 Score=32.70 Aligned_cols=49 Identities=18% Similarity=0.021 Sum_probs=33.4
Q ss_pred CCCCCCCCCCCCCCccceeEEeecccccc------------------------cCCcCCCeeeeecCCCCCCCC
Q 019943 199 AEHTFRPPYYHRNCMSEFMGLIRGGYEAK------------------------ADGFLPGGASLHSCMTPHGPD 248 (333)
Q Consensus 199 ~~~t~rpPyyHrN~dsE~m~~i~G~y~a~------------------------~~g~~pG~~SlHp~g~pHGP~ 248 (333)
.++...+|-+|.+ ..|+.+.+.|...-. ...+.||.+-+-|.+++|+..
T Consensus 51 ~PG~~~~~H~H~~-~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~H~~~ 123 (239)
T 2xlg_A 51 PPGGGPMPHIHYF-INEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYMHGFV 123 (239)
T ss_dssp CTTCSCCSEEESS-EEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEEEEEE
T ss_pred CCCCcCCCeECCC-ccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeEEEECCCCEEEECCCCCEEEE
Confidence 3455556655654 358888888875321 123789999999999999754
No 184
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=28.88 E-value=83 Score=26.17 Aligned_cols=34 Identities=21% Similarity=0.310 Sum_probs=26.9
Q ss_pred cceeEEeecccccccCC--------cCCCeeeeecCCCCCCC
Q 019943 214 SEFMGLIRGGYEAKADG--------FLPGGASLHSCMTPHGP 247 (333)
Q Consensus 214 sE~m~~i~G~y~a~~~g--------~~pG~~SlHp~g~pHGP 247 (333)
.|+++.+.|...-.-++ +.||-.-+-+.+++|.-
T Consensus 141 ~E~~~Vl~G~~~~~~~~~~~~~~~~l~~GD~~~~~~~~~H~~ 182 (198)
T 2bnm_A 141 NEFLFVLEGEIHMKWGDKENPKEALLPTGASMFVEEHVPHAF 182 (198)
T ss_dssp CEEEEEEESCEEEEESCTTSCEEEEECTTCEEEECTTCCEEE
T ss_pred eEEEEEEeeeEEEEECCcCCcccEEECCCCEEEeCCCCceEE
Confidence 69999999986543333 88999999999999953
No 185
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=28.85 E-value=74 Score=26.68 Aligned_cols=32 Identities=16% Similarity=0.144 Sum_probs=22.9
Q ss_pred cCCCCEEEEEEeCeEEEEE--ecce----EEecCCeEE
Q 019943 23 NADGDFLVVPQKGRLWIAT--ECGK----LEVSPGEIA 54 (333)
Q Consensus 23 n~DgDeL~~v~~G~l~l~t--e~G~----l~v~pGd~~ 54 (333)
....+.+++|.+|.+++.. +.|. -.+.+||++
T Consensus 49 G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 86 (237)
T 3fx3_A 49 EEKAQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESF 86 (237)
T ss_dssp TSCCCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEE
T ss_pred CCccceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEe
Confidence 4567899999999999886 3453 235667655
No 186
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=28.63 E-value=23 Score=31.31 Aligned_cols=99 Identities=22% Similarity=0.235 Sum_probs=59.7
Q ss_pred EeccCCceeccccccccCCCCcceEEeecCCCCCceeeeEEEeCCccccCCCCCCCCCCCCCCccceeEEeecccccc--
Q 019943 150 KYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAK-- 227 (333)
Q Consensus 150 kynl~~F~pi~s~~~dH~dPsi~tvlta~s~~~g~~~~dFviF~PRw~~~~~t~rpPyyHrN~dsE~m~~i~G~y~a~-- 227 (333)
++||.+.-.-++. |..|+|-.-..+. + +|.|.. +...--|-. ||.|--.|+.+.+.|+-.=+
T Consensus 7 ~iNl~~wl~e~~~---~~~PPV~Nk~v~~----~----~~~V~~----vgGPn~r~D-~H~~~~eE~Fy~lkG~m~l~v~ 70 (176)
T 1zvf_A 7 PINIDKWLKENEG---LLKPPVNNYCLHK----G----GFTVMI----VGGPNERTD-YHINPTPEWFYQKKGSMLLKVV 70 (176)
T ss_dssp CEEHHHHHHHHGG---GGSSSSCEEEEEC----S----SEEEEE----ECSSBCCSC-EEECSSCEEEEEEESCEEEEEE
T ss_pred CcCHHHHHHHhHh---hcCCCcCCEEEec----C----CEEEEE----EcCCCcCCc-CcCCCCceEEEEEeCEEEEEEE
Confidence 4555555445433 6778877666663 2 555322 332223455 57666667777777764211
Q ss_pred ----------cCCcCCCeeeeecCCCCCCCChhHHHHHHhcCCCCCCceeecceEEEEeeccCc
Q 019943 228 ----------ADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIP 281 (333)
Q Consensus 228 ----------~~g~~pG~~SlHp~g~pHGP~~~~~e~a~~~~~~~~P~~~~~~lAfM~eT~~~l 281 (333)
.--+.+|-+-+.|.+++|-|.+ ..++...++|..++-
T Consensus 71 d~g~~~~~~~dv~i~eGdmfllP~gvpHsP~r-----------------~~e~v~lviErkR~~ 117 (176)
T 1zvf_A 71 DETDAEPKFIDIIINEGDSYLLPGNVPHSPVR-----------------FADTVGIVVEQDRPG 117 (176)
T ss_dssp ECSSSSCEEEEEEECTTEEEEECTTCCEEEEE-----------------CTTCEEEEEEECCCS
T ss_pred cCCCcccceeeEEECCCCEEEcCCCCCcCCcc-----------------cCCcEEEEEEecCCC
Confidence 1137899999999999997752 235556666666664
No 187
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=28.62 E-value=1e+02 Score=25.67 Aligned_cols=47 Identities=15% Similarity=0.070 Sum_probs=33.9
Q ss_pred CCCCCCCCCCCCCCccceeEEeecccccccC----CcCCCeeeeecCCCCCCC
Q 019943 199 AEHTFRPPYYHRNCMSEFMGLIRGGYEAKAD----GFLPGGASLHSCMTPHGP 247 (333)
Q Consensus 199 ~~~t~rpPyyHrN~dsE~m~~i~G~y~a~~~----g~~pG~~SlHp~g~pHGP 247 (333)
.++...++-.| -..|+++.+.|...-.-+ -+.||.+-+-|.+++|.-
T Consensus 64 ~pG~~~~~H~H--~~~E~~~Vl~G~~~~~i~~~~~~l~~Gd~i~ip~~~~H~~ 114 (167)
T 3ibm_A 64 EPGGYTTLERH--EHTHVVMVVRGHAEVVLDDRVEPLTPLDCVYIAPHAWHQI 114 (167)
T ss_dssp CTTCBCCCBBC--SSCEEEEEEESEEEEEETTEEEEECTTCEEEECTTCCEEE
T ss_pred CCCCCCCCccC--CCcEEEEEEeCEEEEEECCEEEEECCCCEEEECCCCcEEE
Confidence 34555555455 356999999998644333 389999999999999954
No 188
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=27.41 E-value=61 Score=26.51 Aligned_cols=32 Identities=19% Similarity=0.307 Sum_probs=22.9
Q ss_pred cCCCCEEEEEEeCeEEEEE--ecce----EEecCCeEE
Q 019943 23 NADGDFLVVPQKGRLWIAT--ECGK----LEVSPGEIA 54 (333)
Q Consensus 23 n~DgDeL~~v~~G~l~l~t--e~G~----l~v~pGd~~ 54 (333)
...++.++++.+|.+++.. +.|. -.+.|||++
T Consensus 14 g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 51 (195)
T 3b02_A 14 GEEARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYF 51 (195)
T ss_dssp TSBCCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEE
T ss_pred CCCCCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEe
Confidence 4557889999999999975 3453 235677765
No 189
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=27.23 E-value=71 Score=27.76 Aligned_cols=20 Identities=20% Similarity=0.305 Sum_probs=17.3
Q ss_pred ecCCCCEEEEEEeCeEEEEE
Q 019943 22 CNADGDFLVVPQKGRLWIAT 41 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~t 41 (333)
..+.+|.+++|.+|.+++..
T Consensus 76 ~G~~~~~~y~i~~G~v~~~~ 95 (291)
T 2qcs_B 76 QGDEGDNFYVIDQGEMDVYV 95 (291)
T ss_dssp TTSBCCEEEEEEECCEEEEE
T ss_pred CCCCCceEEEEeeeEEEEEE
Confidence 35678999999999999987
No 190
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=27.04 E-value=75 Score=26.56 Aligned_cols=32 Identities=22% Similarity=0.265 Sum_probs=22.6
Q ss_pred cCCCCEEEEEEeCeEEEEE--ecce----EEecCCeEE
Q 019943 23 NADGDFLVVPQKGRLWIAT--ECGK----LEVSPGEIA 54 (333)
Q Consensus 23 n~DgDeL~~v~~G~l~l~t--e~G~----l~v~pGd~~ 54 (333)
+...+.+++|.+|.+++.. +.|. -.+.+||++
T Consensus 48 g~~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 85 (232)
T 2gau_A 48 GDIPNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFF 85 (232)
T ss_dssp TCCCCEEEEEEESCEEEEC-----CCCEEEEECTTCEE
T ss_pred CCCCCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEe
Confidence 5567899999999999974 3454 257788875
No 191
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=26.53 E-value=69 Score=27.07 Aligned_cols=32 Identities=16% Similarity=0.086 Sum_probs=23.7
Q ss_pred cCCCCEEEEEEeCeEEEEE--ecce----EEecCCeEE
Q 019943 23 NADGDFLVVPQKGRLWIAT--ECGK----LEVSPGEIA 54 (333)
Q Consensus 23 n~DgDeL~~v~~G~l~l~t--e~G~----l~v~pGd~~ 54 (333)
....+.++++.+|.+++.. +.|. -.+.+||++
T Consensus 58 G~~~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~f 95 (232)
T 1zyb_A 58 GNPCTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLI 95 (232)
T ss_dssp TSBCCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEE
T ss_pred CCcccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCee
Confidence 5567899999999999975 4453 246788865
No 192
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=26.38 E-value=68 Score=26.70 Aligned_cols=40 Identities=20% Similarity=0.218 Sum_probs=30.7
Q ss_pred CCCCCccceeEEeecccccccC----CcCCCeeeeecCCCCCCC
Q 019943 208 YHRNCMSEFMGLIRGGYEAKAD----GFLPGGASLHSCMTPHGP 247 (333)
Q Consensus 208 yHrN~dsE~m~~i~G~y~a~~~----g~~pG~~SlHp~g~pHGP 247 (333)
.|..-..|+++.+.|...-.-+ -+.+|-+-+-+.+++|.-
T Consensus 121 ~H~h~~~E~~~Vl~G~~~~~~~~~~~~l~~GD~i~i~~~~~H~~ 164 (192)
T 1y9q_A 121 PHALGVIEYIHVLEGIMKVFFDEQWHELQQGEHIRFFSDQPHGY 164 (192)
T ss_dssp CCSTTCEEEEEEEESCEEEEETTEEEEECTTCEEEEECSSSEEE
T ss_pred CCCCCCEEEEEEEEeEEEEEECCEEEEeCCCCEEEEcCCCCeEe
Confidence 4655557999999998654332 389999999999999964
No 193
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=26.26 E-value=2e+02 Score=25.49 Aligned_cols=60 Identities=17% Similarity=0.166 Sum_probs=41.0
Q ss_pred ecCCCCEEEEEEeCeEEEEE----ecc-------eEEecCCeEEEECCc--cEEEeeCCCCCeEEEEEeecCC
Q 019943 22 CNADGDFLVVPQKGRLWIAT----ECG-------KLEVSPGEIAVLPQG--FRFAVSLPDGPSRGYIAEIFGT 81 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~t----e~G-------~l~v~pGd~~VIPRG--~~~Rv~~~~~~~r~~iiE~~g~ 81 (333)
-|...--++.|++|+++-+. +.| ...+++||.+.+..+ -.|||.-..+....+-|=.||.
T Consensus 89 HDH~swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~N~~~d~~avSLHvYg~ 161 (211)
T 3uss_A 89 HDHRVWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSDRTSISIHVYGA 161 (211)
T ss_dssp BCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSSSCEEEEEEESS
T ss_pred CCCCeeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCEEEEccCCCCCCEEEEEEcCC
Confidence 34447788999999998854 333 377999999988866 7999983232333455555544
No 194
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=26.04 E-value=66 Score=26.71 Aligned_cols=32 Identities=16% Similarity=0.128 Sum_probs=22.8
Q ss_pred cCCCCEEEEEEeCeEEEEE--ecce----EEecCCeEE
Q 019943 23 NADGDFLVVPQKGRLWIAT--ECGK----LEVSPGEIA 54 (333)
Q Consensus 23 n~DgDeL~~v~~G~l~l~t--e~G~----l~v~pGd~~ 54 (333)
+...+.++++.+|.+++.. +.|. -.+.+||++
T Consensus 49 g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~ 86 (230)
T 3iwz_A 49 GDPAGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFV 86 (230)
T ss_dssp TSBCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEE
T ss_pred CCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEE
Confidence 4557899999999999875 3453 235677765
No 195
>2l3a_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; NMR {Streptococcus pneumoniae} PDB: 3obh_A*
Probab=25.35 E-value=24 Score=27.61 Aligned_cols=20 Identities=35% Similarity=0.838 Sum_probs=17.3
Q ss_pred CeEeeecCCccceEeccCCcee
Q 019943 137 FNVVAWHGNYVPYKYDLSKFCP 158 (333)
Q Consensus 137 fDVVgW~G~~~Pykynl~~F~p 158 (333)
++.|.|.|. |=||||+++.|
T Consensus 29 LNlVSWNg~--~pKyDIR~Wsp 48 (82)
T 2l3a_A 29 INRVSFNGA--PAKFDIRAWSP 48 (82)
T ss_dssp EEEEEESSS--CEEEEEEEECS
T ss_pred EEEEeECCC--CCCccccccCc
Confidence 689999886 67999999977
No 196
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=25.14 E-value=69 Score=28.09 Aligned_cols=20 Identities=15% Similarity=0.298 Sum_probs=16.6
Q ss_pred ecCCCCEEEEEEeCeEEEEE
Q 019943 22 CNADGDFLVVPQKGRLWIAT 41 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~t 41 (333)
....+|.++++.+|.+++..
T Consensus 76 ~G~~~~~~yiI~~G~v~v~~ 95 (299)
T 3shr_A 76 EGDVGSLVYVMEDGKVEVTK 95 (299)
T ss_dssp TTCBCCCEEEEEESCEEEEE
T ss_pred CCCcCceEEEEEEEEEEEEE
Confidence 46678899999999999943
No 197
>3cnk_A Filamin-A; FLNA24, X-RAY crystalography, homodimer, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; 1.65A {Homo sapiens}
Probab=24.96 E-value=49 Score=24.70 Aligned_cols=23 Identities=39% Similarity=0.580 Sum_probs=18.0
Q ss_pred ccccEEEEEEECCceEEEEcCCCCCeE
Q 019943 113 SRLGYTIVQKFGGELFTARQDFSPFNV 139 (333)
Q Consensus 113 ~~~~~~vv~K~~g~l~~~~~~hsPfDV 139 (333)
+.|+|+|.+|++|+ ..+-|||.|
T Consensus 64 ~~G~y~i~V~~~g~----~I~gSPF~v 86 (89)
T 3cnk_A 64 DKGEYTLVVKWGHE----HIPGSPYRV 86 (89)
T ss_dssp SCEEEEEEEEETTE----ECTTCSEEE
T ss_pred CCccEEEEEEECCE----ECCCCCEEE
Confidence 34679999999886 567888876
No 198
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=24.92 E-value=73 Score=27.56 Aligned_cols=48 Identities=19% Similarity=0.225 Sum_probs=37.9
Q ss_pred CCCCCCCCCCCCCCccceeEEeecccccccCCcCCCeeeeecCCCCCCCC
Q 019943 199 AEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPD 248 (333)
Q Consensus 199 ~~~t~rpPyyHrN~dsE~m~~i~G~y~a~~~g~~pG~~SlHp~g~pHGP~ 248 (333)
.+++.=|+=-| --.|+.+.+.|.|....+-+.+|..-.-|.++.|+|.
T Consensus 133 ~pG~~~p~H~H--~g~E~~~VL~G~f~de~~~~~~Gd~~~~p~g~~H~p~ 180 (195)
T 2q1z_B 133 PGGQAVPDHGH--RGLELTLVLQGAFRDETDRFGAGDIEIADQELEHTPV 180 (195)
T ss_dssp CTTCBCCCCCC--SSCEEEEEEESEEECSSSEEETTCEEEECSSCCCCCE
T ss_pred CCCCCCCCcCC--CCeEEEEEEEEEEECCcEEECCCeEEEeCcCCccCCE
Confidence 46666666445 3459999999999765455999999999999999986
No 199
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=24.65 E-value=1e+02 Score=25.56 Aligned_cols=39 Identities=18% Similarity=0.095 Sum_probs=29.4
Q ss_pred CCCCccceeEEeecccccccC----CcCCCeeeeecCCCCCCC
Q 019943 209 HRNCMSEFMGLIRGGYEAKAD----GFLPGGASLHSCMTPHGP 247 (333)
Q Consensus 209 HrN~dsE~m~~i~G~y~a~~~----g~~pG~~SlHp~g~pHGP 247 (333)
|+--..|+++.+.|...-.-+ -+.||.+-+-|.+++|.-
T Consensus 60 H~H~~~E~~~Vl~G~~~v~v~g~~~~l~~Gd~i~ip~~~~H~~ 102 (156)
T 3kgz_A 60 ERHAHVHAVMIHRGHGQCLVGETISDVAQGDLVFIPPMTWHQF 102 (156)
T ss_dssp BBCSSCEEEEEEEEEEEEEETTEEEEEETTCEEEECTTCCEEE
T ss_pred eeCCCcEEEEEEeCEEEEEECCEEEEeCCCCEEEECCCCcEEe
Confidence 443346999999997654433 389999999999999954
No 200
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=24.43 E-value=1.6e+02 Score=25.68 Aligned_cols=60 Identities=18% Similarity=0.124 Sum_probs=40.9
Q ss_pred EEEEEEeeCCCCCCCceecCCCCEEEEEEeCe-EEEE--Eecce---EEe----cCCe---EEEECCccEEEeeC
Q 019943 5 FTCNRYTANKSMDNCAFCNADGDFLVVPQKGR-LWIA--TECGK---LEV----SPGE---IAVLPQGFRFAVSL 66 (333)
Q Consensus 5 ~ai~~y~~~~sM~~~~~~n~DgDeL~~v~~G~-l~l~--te~G~---l~v----~pGd---~~VIPRG~~~Rv~~ 66 (333)
-+|+.--...+. ..|---+.||+++-+.|. |+|. .+.|. ..| ..|+ .+|||+|+=+.-.+
T Consensus 54 TaIYfLL~~~~~--S~~HRv~sdEiW~~~~G~pL~l~~~~~dG~~~~~~LG~d~~~Ge~~pQ~vVP~G~WqaA~~ 126 (172)
T 3loi_A 54 TMIYYLMQAGQP--DPFHRVKSDETFVHNLGGSMKIHMIHPDGSYSCSILGNPLEHPEARHQVVVPRRVWFAQEV 126 (172)
T ss_dssp EEEEEEEETTCC--EEEEECSSEEEEEEEEESCEEEEEECTTSCEEEEEESCTTTSTTCBSEEEECTTCEEEEEE
T ss_pred eEEEEEEcCCCC--ccCEEecCCEEEEEEcCCCEEEEEEcCCCceEEEEeCCCcccCCcceEEEECCCEEEEEEe
Confidence 466666666653 456556899999999994 3444 45564 334 3567 89999999876665
No 201
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=24.34 E-value=53 Score=31.24 Aligned_cols=24 Identities=29% Similarity=0.486 Sum_probs=21.0
Q ss_pred eEEecCCeEEEECCccEEEeeCCC
Q 019943 45 KLEVSPGEIAVLPQGFRFAVSLPD 68 (333)
Q Consensus 45 ~l~v~pGd~~VIPRG~~~Rv~~~~ 68 (333)
...++|||.+.||.|--|.|...+
T Consensus 257 ~~~l~pGd~l~iP~gw~H~v~~~~ 280 (336)
T 3k2o_A 257 EILQKPGETVFVPGGWWHVVLNLD 280 (336)
T ss_dssp EEEECTTCEEEECTTCEEEEEESS
T ss_pred EEEECCCCEEEeCCCCcEEEecCC
Confidence 367999999999999999998644
No 202
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=23.99 E-value=80 Score=27.40 Aligned_cols=20 Identities=15% Similarity=0.175 Sum_probs=16.7
Q ss_pred ecCCCCEEEEEEeCeEEEEE
Q 019943 22 CNADGDFLVVPQKGRLWIAT 41 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~t 41 (333)
.+..+|.++++.+|++++..
T Consensus 194 ~g~~~~~~y~i~~G~v~~~~ 213 (291)
T 2qcs_B 194 QGEPGDEFFIILEGSAAVLQ 213 (291)
T ss_dssp TTSCCCEEEEEEEEEEEEEE
T ss_pred CCccCCEEEEEEeCEEEEEE
Confidence 35678899999999999874
No 203
>3jqo_A TRAF protein; helical outer membrane TM, outer membrane protein complex, plasmid, transport protein; HET: LDA; 2.60A {Escherichia coli}
Probab=23.89 E-value=41 Score=30.76 Aligned_cols=51 Identities=18% Similarity=0.301 Sum_probs=33.2
Q ss_pred CCeEEEECCccEE----EeeCCCCCeEEEEEeecCCceec-CC----------CCCCCCCCCCCCCCcc
Q 019943 50 PGEIAVLPQGFRF----AVSLPDGPSRGYIAEIFGTHFQL-PD----------LGPIGANGLAAPRDFL 103 (333)
Q Consensus 50 pGd~~VIPRG~~~----Rv~~~~~~~r~~iiE~~g~~~~l-Pe----------~GpiG~ngla~~RDf~ 103 (333)
-|.+++||||.+- +-....|..|++|+=.. +.+ |+ -+++|..|+...-|-+
T Consensus 78 ~G~~lLIPkGSrliG~Y~s~v~~GQ~Rv~v~W~R---ii~~P~G~~i~L~spgaD~lG~aGl~g~VdnH 143 (227)
T 3jqo_A 78 DGLVRLIDKGSWVDGQITGGIKDGQARVFVLWER---IRNDQDGTIVNIDSAGTNSLGSAGIPGQVDAH 143 (227)
T ss_dssp TSCBEEECTTCEEEEEECSCCCTTCCEECCEEEE---EECTTTCEEEEEEEEEECTTCCBSEECEEECC
T ss_pred CCCEEEEcCCCEEEEEECCCCccCcceEEEEeeE---EEEcCCCCEEeccCCCcCccccCcCCcccccc
Confidence 5888999999985 33334456787776432 555 54 5678888887654433
No 204
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=23.84 E-value=1.1e+02 Score=25.34 Aligned_cols=32 Identities=22% Similarity=0.384 Sum_probs=23.8
Q ss_pred cCCCCEEEEEEeCeEEEEEe--cce----EEecCCeEE
Q 019943 23 NADGDFLVVPQKGRLWIATE--CGK----LEVSPGEIA 54 (333)
Q Consensus 23 n~DgDeL~~v~~G~l~l~te--~G~----l~v~pGd~~ 54 (333)
.+..+.++++.+|.+++... .|. -.+.+||++
T Consensus 44 G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 81 (227)
T 3d0s_A 44 GEPGDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMF 81 (227)
T ss_dssp TCCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEE
T ss_pred CCcCCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEE
Confidence 55678999999999998764 453 246778865
No 205
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=23.56 E-value=1.2e+02 Score=24.69 Aligned_cols=32 Identities=19% Similarity=0.251 Sum_probs=22.8
Q ss_pred cCCCCEEEEEEeCeEEEEEe--cce----EEecCCeEE
Q 019943 23 NADGDFLVVPQKGRLWIATE--CGK----LEVSPGEIA 54 (333)
Q Consensus 23 n~DgDeL~~v~~G~l~l~te--~G~----l~v~pGd~~ 54 (333)
....+.++++.+|.+++... .|. -.+.+||++
T Consensus 34 g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~ 71 (210)
T 3ryp_A 34 GEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFI 71 (210)
T ss_dssp TSBCCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEE
T ss_pred CCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEe
Confidence 45578899999999999753 453 235677765
No 206
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=23.21 E-value=3.2e+02 Score=23.62 Aligned_cols=50 Identities=18% Similarity=0.218 Sum_probs=33.6
Q ss_pred CCCCEEEEEEeCeE-EEEEec-------ce---EEec--CCeEEEECCccEEEeeCCCCCeEE
Q 019943 24 ADGDFLVVPQKGRL-WIATEC-------GK---LEVS--PGEIAVLPQGFRFAVSLPDGPSRG 73 (333)
Q Consensus 24 ~DgDeL~~v~~G~l-~l~te~-------G~---l~v~--pGd~~VIPRG~~~Rv~~~~~~~r~ 73 (333)
.....|+.+.+|++ .+--+. |. +++. .+..+.||+|+-|-....++.+-+
T Consensus 69 ~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~ 131 (185)
T 1ep0_A 69 KPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDECIV 131 (185)
T ss_dssp SCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEE
T ss_pred ccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCCeEE
Confidence 45678999999995 333333 22 4443 368899999999988765544433
No 207
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=22.86 E-value=99 Score=23.28 Aligned_cols=23 Identities=17% Similarity=0.303 Sum_probs=20.0
Q ss_pred ceecCCCCEEEEEEeCeEEEEEe
Q 019943 20 AFCNADGDFLVVPQKGRLWIATE 42 (333)
Q Consensus 20 ~~~n~DgDeL~~v~~G~l~l~te 42 (333)
--.|.-+-|+++|.+|+++++..
T Consensus 51 PH~hprA~ei~~V~~G~~~v~~V 73 (79)
T 1dgw_X 51 PHYNSRATVILVANEGRAEVELV 73 (79)
T ss_dssp EEEESSCEEEEEEEESCEEEEEE
T ss_pred CccCCCCcEEEEEEeceEEEEEe
Confidence 45789999999999999999764
No 208
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=22.38 E-value=83 Score=31.12 Aligned_cols=29 Identities=24% Similarity=0.230 Sum_probs=23.9
Q ss_pred eEEecCCeEEEECCccEEEeeCCCCCeEEEEEeec
Q 019943 45 KLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIF 79 (333)
Q Consensus 45 ~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~~ 79 (333)
.+.|+|||.+.||.|+-|-.. .|.++|.-
T Consensus 267 ~v~L~pGea~flpAg~~HAYl------~G~~vE~M 295 (440)
T 1pmi_A 267 HVGLNKGEAMFLQAKDPHAYI------SGDIIECM 295 (440)
T ss_dssp EEEECTTCEEEECTTCCEEEE------EEEEEEEE
T ss_pred eEecCCCCEEecCCCCccccC------CCcEEEEe
Confidence 477999999999999999885 35677764
No 209
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=22.14 E-value=63 Score=24.72 Aligned_cols=48 Identities=15% Similarity=0.077 Sum_probs=32.4
Q ss_pred CCCCCCCCCCCCCccceeEEeeccccccc-C----CcCCCeeeeecCCCCCCCC
Q 019943 200 EHTFRPPYYHRNCMSEFMGLIRGGYEAKA-D----GFLPGGASLHSCMTPHGPD 248 (333)
Q Consensus 200 ~~t~rpPyyHrN~dsE~m~~i~G~y~a~~-~----g~~pG~~SlHp~g~pHGP~ 248 (333)
+++.-++-.|. ...|+++.+.|...-.- + -+.+|.+-+-|.+++|+-.
T Consensus 48 pg~~~~~H~H~-~~~e~~~Vl~G~~~~~~~~~~~~~l~~Gd~~~i~~~~~H~~~ 100 (125)
T 3h8u_A 48 PGQEIASHVHP-HGQDTWTVISGEAEYHQGNGIVTHLKAGDIAIAKPGQVHGAM 100 (125)
T ss_dssp TTCEECCC-CT-TCEEEEEEEECEEEEECSTTCEEEEETTEEEEECTTCCCEEE
T ss_pred CCCcCCcccCC-CCeEEEEEEEeEEEEEECCCeEEEeCCCCEEEECCCCEEEeE
Confidence 44444444454 23688888998875433 2 3789999999999999653
No 210
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=22.00 E-value=78 Score=26.33 Aligned_cols=32 Identities=25% Similarity=0.299 Sum_probs=22.4
Q ss_pred cCCCCEEEEEEeCeEEEEE--ecce----EEecCCeEE
Q 019943 23 NADGDFLVVPQKGRLWIAT--ECGK----LEVSPGEIA 54 (333)
Q Consensus 23 n~DgDeL~~v~~G~l~l~t--e~G~----l~v~pGd~~ 54 (333)
....+.++++.+|.+++.. +.|. -.+.+||++
T Consensus 37 G~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 74 (213)
T 1o5l_A 37 DDPIEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQII 74 (213)
T ss_dssp TCBCCEEEEEEESCEEEEEECTTSCEEEEEEECSSEES
T ss_pred CCccceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEe
Confidence 4557889999999999875 3453 235666654
No 211
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=21.56 E-value=1.2e+02 Score=26.13 Aligned_cols=32 Identities=19% Similarity=0.251 Sum_probs=22.0
Q ss_pred cCCCCEEEEEEeCeEEEEEe--cce----EEecCCeEE
Q 019943 23 NADGDFLVVPQKGRLWIATE--CGK----LEVSPGEIA 54 (333)
Q Consensus 23 n~DgDeL~~v~~G~l~l~te--~G~----l~v~pGd~~ 54 (333)
...++.+++|.+|.+++... .|. -.+.+||++
T Consensus 84 G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~ 121 (260)
T 3kcc_A 84 GEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFI 121 (260)
T ss_dssp TCBCCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEE
T ss_pred CCcCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEE
Confidence 44578899999999998753 443 235666655
No 212
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=21.38 E-value=78 Score=26.66 Aligned_cols=45 Identities=11% Similarity=-0.034 Sum_probs=31.7
Q ss_pred CCCCCCCCCCCCccceeEEeecccccccC----CcCCCeeeeecCCCCCCC
Q 019943 201 HTFRPPYYHRNCMSEFMGLIRGGYEAKAD----GFLPGGASLHSCMTPHGP 247 (333)
Q Consensus 201 ~t~rpPyyHrN~dsE~m~~i~G~y~a~~~----g~~pG~~SlHp~g~pHGP 247 (333)
+...++-.|. ..|+++.+.|...-.-+ -+.||.+-+-|.+++|.-
T Consensus 63 G~~~~~H~H~--~~E~~~Vl~G~~~~~v~g~~~~l~~GD~i~ip~g~~H~~ 111 (166)
T 3jzv_A 63 GGHSTLERHQ--HAHGVMILKGRGHAMVGRAVSAVAPYDLVTIPGWSWHQF 111 (166)
T ss_dssp EEECCCBBCS--SCEEEEEEEECEEEEETTEEEEECTTCEEEECTTCCEEE
T ss_pred CCccCceeCC--CcEEEEEEeCEEEEEECCEEEEeCCCCEEEECCCCcEEe
Confidence 3333443444 46999899987654333 389999999999999954
No 213
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=21.32 E-value=2.8e+02 Score=24.39 Aligned_cols=47 Identities=21% Similarity=0.345 Sum_probs=32.2
Q ss_pred CCEEEEEEeCeE-EEEEec-------ce---EEec--CCeEEEECCccEEEeeCCCCCeE
Q 019943 26 GDFLVVPQKGRL-WIATEC-------GK---LEVS--PGEIAVLPQGFRFAVSLPDGPSR 72 (333)
Q Consensus 26 gDeL~~v~~G~l-~l~te~-------G~---l~v~--pGd~~VIPRG~~~Rv~~~~~~~r 72 (333)
...|+.+.+|++ .+--+. |+ ++|. .+..+.||+|+-|-....++.+-
T Consensus 89 q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~a~ 148 (196)
T 1wlt_A 89 QGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDSIV 148 (196)
T ss_dssp CEEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSSEEE
T ss_pred CceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCCeE
Confidence 578899999988 333332 22 3444 57899999999998865454443
No 214
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=21.27 E-value=1.3e+02 Score=24.67 Aligned_cols=33 Identities=21% Similarity=0.370 Sum_probs=24.2
Q ss_pred ecCCCCEEEEEEeCeEEEEEe--cce----EEecCCeEE
Q 019943 22 CNADGDFLVVPQKGRLWIATE--CGK----LEVSPGEIA 54 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~te--~G~----l~v~pGd~~ 54 (333)
.+...+.++++.+|.+++... .|. -.+.+||++
T Consensus 76 ~G~~~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~f 114 (187)
T 3gyd_A 76 EGDPGDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAII 114 (187)
T ss_dssp TTSCCCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEE
T ss_pred CCCCCCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCee
Confidence 456688999999999998764 343 246777765
No 215
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=20.97 E-value=80 Score=26.36 Aligned_cols=33 Identities=15% Similarity=0.293 Sum_probs=22.3
Q ss_pred ecCCCCEEEEEEeCeEEEEEe--cce----EEecCCeEE
Q 019943 22 CNADGDFLVVPQKGRLWIATE--CGK----LEVSPGEIA 54 (333)
Q Consensus 22 ~n~DgDeL~~v~~G~l~l~te--~G~----l~v~pGd~~ 54 (333)
.....+.+++|.+|.+++... .|. -.+.+||++
T Consensus 43 ~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~ 81 (231)
T 3e97_A 43 QDAEGEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVV 81 (231)
T ss_dssp TTCTTTCEEEECSSEEEEEEECC--CEEEEEEEESSEEE
T ss_pred CCCCCCeEEEEEecEEEEEEECCCCceEEEEecCCCCEE
Confidence 356688999999999998763 443 235666654
No 216
>3esg_A HUTD, putative uncharacterized protein; beta barrel, unknown function; 1.80A {Pseudomonas fluorescens} SCOP: b.82.1.0
Probab=20.91 E-value=42 Score=29.94 Aligned_cols=48 Identities=8% Similarity=0.065 Sum_probs=33.3
Q ss_pred CCE-EEEEEeCeEEEEEecceEEecCCeEEEECCccEEEeeCCCCCeEEEEEeec
Q 019943 26 GDF-LVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIF 79 (333)
Q Consensus 26 gDe-L~~v~~G~l~l~te~G~l~v~pGd~~VIPRG~~~Rv~~~~~~~r~~iiE~~ 79 (333)
++- |+|.++|.+.+.. ..+.+||-++|-.... ..++ ++..+.+|||..
T Consensus 142 a~~~lv~~~~G~~~v~~----~~L~~~D~L~~~~~~~-~~~~-~~~~~~~~iel~ 190 (193)
T 3esg_A 142 AQTVLVFSVADEVKVLG----EKLGHHDCLQVDGNAG-LLDI-SVTGRCCLIELT 190 (193)
T ss_dssp CSEEEEEECSSCEEETT----EEECTTCEEEECSCCS-CEEE-EEESSEEEEEEE
T ss_pred CCEEEEEEeeCCEEEEE----EecCCCCEEEEeCCcc-eEEE-ecceEEEEEEEE
Confidence 444 7788889888865 7899999999865433 2222 234788899875
No 217
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=20.77 E-value=4e+02 Score=23.01 Aligned_cols=51 Identities=16% Similarity=0.138 Sum_probs=33.8
Q ss_pred CCCCEEEEEEeCeE-EEEEecc-------e---EEecC--CeEEEECCccEEEeeCCCCCeEEE
Q 019943 24 ADGDFLVVPQKGRL-WIATECG-------K---LEVSP--GEIAVLPQGFRFAVSLPDGPSRGY 74 (333)
Q Consensus 24 ~DgDeL~~v~~G~l-~l~te~G-------~---l~v~p--Gd~~VIPRG~~~Rv~~~~~~~r~~ 74 (333)
.....|+.+.+|++ .+--+.+ . +++.. +..+.||+|+-|-....++.+-++
T Consensus 70 ~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~ 133 (184)
T 2ixk_A 70 QAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEYAEFL 133 (184)
T ss_dssp SCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEE
T ss_pred CCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCCEEEE
Confidence 44668899999995 3433332 2 44443 688999999999887655444433
No 218
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=20.69 E-value=99 Score=27.05 Aligned_cols=32 Identities=22% Similarity=0.347 Sum_probs=23.4
Q ss_pred cCCCCEEEEEEeCeEEEEEec---ce----EEecCCeEE
Q 019943 23 NADGDFLVVPQKGRLWIATEC---GK----LEVSPGEIA 54 (333)
Q Consensus 23 n~DgDeL~~v~~G~l~l~te~---G~----l~v~pGd~~ 54 (333)
.+.+|.+++|.+|.+++.... |. -.+.+||++
T Consensus 195 G~~~~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~~f 233 (299)
T 3shr_A 195 GARGDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWF 233 (299)
T ss_dssp TCEECEEEEEEESEEEEEECCSSSCCCEEEEEEETTCEE
T ss_pred CCCCCEEEEEEeeEEEEEEecCCCCcceEEEEcCCCCEe
Confidence 556788999999999998754 32 346677765
No 219
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=20.63 E-value=1e+02 Score=26.04 Aligned_cols=19 Identities=5% Similarity=0.085 Sum_probs=15.9
Q ss_pred cCCCCEEEEEEeCeEEEEE
Q 019943 23 NADGDFLVVPQKGRLWIAT 41 (333)
Q Consensus 23 n~DgDeL~~v~~G~l~l~t 41 (333)
....+.+++|.+|.+++..
T Consensus 33 G~~~~~~y~I~~G~v~~~~ 51 (238)
T 2bgc_A 33 WDPQEYCIFLYDGITKLTS 51 (238)
T ss_dssp TCCCCEEEEEEESEEEEEE
T ss_pred CCCCceEEEEEecEEEEEE
Confidence 4567899999999999865
No 220
>1v05_A Filamin C; actin-binding protein, immunoglobulin; 1.43A {Homo sapiens} SCOP: b.1.18.10 PDB: 2eed_A
Probab=20.57 E-value=67 Score=24.27 Aligned_cols=23 Identities=35% Similarity=0.590 Sum_probs=17.9
Q ss_pred ccccEEEEEEECCceEEEEcCCCCCeE
Q 019943 113 SRLGYTIVQKFGGELFTARQDFSPFNV 139 (333)
Q Consensus 113 ~~~~~~vv~K~~g~l~~~~~~hsPfDV 139 (333)
+.|.|+|.+|++|+ ..+-|||.|
T Consensus 71 ~~G~y~i~V~~~g~----~V~gSPF~v 93 (96)
T 1v05_A 71 EKGDYILIVKWGDE----SVPGSPFKV 93 (96)
T ss_dssp SCEEEEEEEEETTE----ECTTCSEEE
T ss_pred CCEEEEEEEEECCE----ECCCCCEEE
Confidence 44689999999985 557888876
No 221
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=20.34 E-value=97 Score=26.39 Aligned_cols=32 Identities=13% Similarity=0.188 Sum_probs=24.1
Q ss_pred cCCCCEEEEEEeCeEEEEE--ecce----EEecCCeEE
Q 019943 23 NADGDFLVVPQKGRLWIAT--ECGK----LEVSPGEIA 54 (333)
Q Consensus 23 n~DgDeL~~v~~G~l~l~t--e~G~----l~v~pGd~~ 54 (333)
....+.+++|.+|.+++.. +.|. -.+.|||++
T Consensus 58 G~~~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~ 95 (243)
T 3la7_A 58 GDPAERVYFLLKGAVKLSRVYEAGEEITVALLRENSVF 95 (243)
T ss_dssp TSBCCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEE
T ss_pred CCCCceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEE
Confidence 4557899999999999985 4454 237888876
No 222
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=20.30 E-value=1e+02 Score=26.29 Aligned_cols=19 Identities=5% Similarity=0.172 Sum_probs=14.2
Q ss_pred cCCCCEEEEEEeCeEEEEE
Q 019943 23 NADGDFLVVPQKGRLWIAT 41 (333)
Q Consensus 23 n~DgDeL~~v~~G~l~l~t 41 (333)
....+.++++.+|.+++..
T Consensus 47 G~~~~~~y~i~~G~v~~~~ 65 (250)
T 3e6c_C 47 GEEITSMIFLVEGKIKLDI 65 (250)
T ss_dssp TCCCCSEEEEEESCEEEEE
T ss_pred CCCCCeEEEEEeeEEEEEE
Confidence 4456778888888888765
No 223
>3aqy_A Beta-1,3-glucan-binding protein; beta-sandwich, immune receptor, sugar bindi protein; 1.58A {Plodia interpunctella} PDB: 3aqz_A* 3aqx_A* 2rqe_A
Probab=20.13 E-value=1.2e+02 Score=24.28 Aligned_cols=46 Identities=17% Similarity=0.143 Sum_probs=31.9
Q ss_pred eEEEEEEeeCCCCCCCceecCCCCEEEEEEeC-eEEEEEecceEEecCCeEE
Q 019943 4 LFTCNRYTANKSMDNCAFCNADGDFLVVPQKG-RLWIATECGKLEVSPGEIA 54 (333)
Q Consensus 4 ~~ai~~y~~~~sM~~~~~~n~DgDeL~~v~~G-~l~l~te~G~l~v~pGd~~ 54 (333)
|||+|.+. |++|.+ ...|+..--+.+. .++...++-.+.|++||.+
T Consensus 29 lfafh~~i-N~~~~~----~~~g~~~~dit~~~~GrW~~~d~~~~lk~GD~i 75 (106)
T 3aqy_A 29 LFAFHGKL-NEEMDG----LEAGHWARDITKPKEGRWTFRDRNVKLKLGDKI 75 (106)
T ss_dssp EEEEEEEE-SSCCCS----SCCCSEEEEECCCBTTEEEEEECSCCCCTTCEE
T ss_pred EEEEEEEe-cCCCCc----cccceeeeeeeEecCCEEEEECCceEeCCCCEE
Confidence 78999876 888854 2347766544433 4555566668999999986
Done!