BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019948
(333 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2V9B0|MY1R1_SOLTU Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1
Length = 297
Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 115/182 (63%), Gaps = 12/182 (6%)
Query: 23 VKIFGVRLTDGSIRKSASMGNLSHYAGSTSGHNNNNASNTPDSPGETPDHHAD-GYASED 81
+ +FGVR+ +RKS S+ +LS Y H N N +N E+ D GYAS D
Sbjct: 24 IMLFGVRVKVDPMRKSVSLNDLSQYE-----HPNANNNNNGGDNNESSKVAQDEGYASAD 78
Query: 82 --FVPGSSSSRERKKGVPWTEEEHRMFLLGLQKLGKGDWRGIARNYVVSRTPTQVASHAQ 139
S+S RERK+GVPWTEEEH++FLLGLQK+GKGDWRGI+RN+V +RTPTQVASHAQ
Sbjct: 79 DAVQHQSNSGRERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQ 138
Query: 140 KYFIRQSNVSRRKRRSSLFDIVADE----PLDTPAASQDLFSANHTQGETQSNNPLPAPP 195
KYF+R+SN++RR+RRSSLFDI D P++ Q++ T N P P
Sbjct: 139 KYFLRRSNLNRRRRRSSLFDITTDSVSVMPIEEVENKQEIPVVAPATLPTTKTNAFPVAP 198
Query: 196 AL 197
+
Sbjct: 199 TV 200
>sp|Q8S9H7|DIV_ANTMA Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA
PE=2 SV=1
Length = 307
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 53/77 (68%), Positives = 66/77 (85%)
Query: 85 GSSSSRERKKGVPWTEEEHRMFLLGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKYFIR 144
G S +ERKKGVPWTEEEH++FL+GL+K GKGDWR I+RN+V++RTPTQVASHAQKYFIR
Sbjct: 121 GRPSEQERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIR 180
Query: 145 QSNVSRRKRRSSLFDIV 161
Q + + KRR+S+ DI
Sbjct: 181 QLSGGKDKRRASIHDIT 197
>sp|Q869R9|MYBJ_DICDI Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1
Length = 734
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 98 WTEEEHRMFLLGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKYFIRQSNVSRRKRRS-- 155
WT+EEH FL G+Q GKG W+ IA+ +V +RTPTQ+ SHAQKY++RQ ++ KR
Sbjct: 379 WTKEEHIRFLNGIQIHGKGAWKEIAQ-FVGTRTPTQIQSHAQKYYLRQKQETKNKRSIHD 437
Query: 156 -SLFDIVAD 163
SL D++ D
Sbjct: 438 LSLQDLIDD 446
>sp|Q54HX6|MYBI_DICDI Myb-like protein I OS=Dictyostelium discoideum GN=mybI PE=3 SV=1
Length = 977
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 89 SRERKKGVPWTEEEHRMFLLGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKYFIRQSNV 148
S ++K+ WT EEH F+ L K G D + I++ YV +R PTQV +HAQKYF+R
Sbjct: 166 SEKKKQSRYWTPEEHSRFIEALSKYGHKDVKSISQ-YVSTRNPTQVRTHAQKYFLRIDRE 224
Query: 149 SRRKRRS 155
RK S
Sbjct: 225 RGRKLES 231
>sp|Q54Z40|MYBH_DICDI Myb-like protein H OS=Dictyostelium discoideum GN=mybH PE=3 SV=1
Length = 1217
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 97 PWTEEEHRMFLLGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKYF--IRQSN 147
PW+ EEH +FL ++K G+G+W+ I+ + SR Q+ +HA+ YF I Q N
Sbjct: 231 PWSNEEHELFLKAIEKYGRGNWKLIS-TLIKSRNTLQIKNHARIYFDKISQQN 282
Score = 36.6 bits (83), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 98 WTEEEHRMFLLGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKYFIR 144
WT+EE R+F+ KL D + I + +V ++T QV SHAQK+ ++
Sbjct: 153 WTKEEERLFVEAY-KLYDKDNKKI-QEHVKTKTILQVRSHAQKFALK 197
>sp|Q54IF9|MYBG_DICDI Myb-like protein G OS=Dictyostelium discoideum GN=mybG PE=3 SV=1
Length = 423
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 98 WTEEEHRMFLLGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKYFIR 144
WT+EEH+ FL L + DW+ I ++V S+T Q+ SHAQKYFI+
Sbjct: 44 WTDEEHQKFLEALTLFDR-DWKKI-ESFVGSKTVIQIRSHAQKYFIK 88
>sp|Q6R0H0|ASG4_ARATH Transcription factor ASG4 OS=Arabidopsis thaliana GN=ASG4 PE=2 SV=1
Length = 287
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 98 WTEEEHRMFLLGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKYFIR 144
WTE+EH FL L L DW+ I + +V S+T Q+ SHAQKYF++
Sbjct: 64 WTEQEHDKFLEALH-LFDRDWKKI-KAFVGSKTVIQIRSHAQKYFLK 108
>sp|P92973|CCA1_ARATH Protein CCA1 OS=Arabidopsis thaliana GN=CCA1 PE=1 SV=1
Length = 608
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 7/53 (13%)
Query: 90 RERKKGVPWTEEEHRMFLLGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKYF 142
RER WTEEEH F+ L+ G+ W+ I +V ++T Q+ SHAQK+F
Sbjct: 24 RER-----WTEEEHNRFIEALRLYGRA-WQKI-EEHVATKTAVQIRSHAQKFF 69
>sp|Q6R0H1|LHY_ARATH Protein LHY OS=Arabidopsis thaliana GN=LHY PE=1 SV=2
Length = 645
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 7/58 (12%)
Query: 87 SSSRERKKGVPWTEEEHRMFLLGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKYFIR 144
+ RER WTE+EH FL L+ G+ W+ I ++ ++T Q+ SHAQK+F +
Sbjct: 21 TKQRER-----WTEDEHERFLEALRLYGRA-WQRI-EEHIGTKTAVQIRSHAQKFFTK 71
>sp|Q86HX9|MYBK_DICDI Myb-like protein K OS=Dictyostelium discoideum GN=mybK PE=3 SV=1
Length = 894
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 98 WTEEEHRMFLLGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKYFIRQ 145
WT EEH FL +Q+ G D+ IA+ +V +R QV +H Y Q
Sbjct: 657 WTSEEHNKFLEAVQQFGIKDYHAIAK-FVQTRNHHQVRTHVNTYLKNQ 703
>sp|Q69Z66|MYSM1_MOUSE Histone H2A deubiquitinase MYSM1 OS=Mus musculus GN=Mysm1 PE=2 SV=2
Length = 819
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 96 VPWTEEEHRMFLLGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKYF 142
V WT EE +F GL K G+ W IA + SRT QV S+A++YF
Sbjct: 116 VKWTVEEKELFEQGLAKFGRR-WTKIA-TLLKSRTVLQVKSYARQYF 160
>sp|Q5VVJ2|MYSM1_HUMAN Histone H2A deubiquitinase MYSM1 OS=Homo sapiens GN=MYSM1 PE=1 SV=1
Length = 828
Score = 40.4 bits (93), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 96 VPWTEEEHRMFLLGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKYF 142
V WT EE +F GL K G+ W I++ + SRT QV S+A++YF
Sbjct: 119 VKWTIEEKELFEQGLAKFGRR-WTKISK-LIGSRTVLQVKSYARQYF 163
>sp|Q5F3F2|MYSM1_CHICK Histone H2A deubiquitinase MYSM1 OS=Gallus gallus GN=MYSM1 PE=2
SV=1
Length = 832
Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 96 VPWTEEEHRMFLLGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKYF 142
+ WT EE +F GL K G+ W IA+ + SRT QV S+A++YF
Sbjct: 120 LKWTSEEKELFEQGLVKYGRR-WTKIAK-LIGSRTVLQVKSYARQYF 164
>sp|Q6NRB5|TAD2B_XENLA Transcriptional adapter 2-beta OS=Xenopus laevis GN=tada2b PE=2
SV=1
Length = 420
Score = 39.7 bits (91), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 98 WTEEEHRMFLLGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKYFI 143
WT E ++ L +++ G G+W +A + SRTPT+V H +I
Sbjct: 70 WTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPTEVMEHYVTMYI 115
>sp|Q9LYP5|ARR21_ARATH Putative two-component response regulator ARR21 OS=Arabidopsis
thaliana GN=ARR21 PE=2 SV=3
Length = 613
Score = 38.9 bits (89), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 86 SSSSRERKKGVPWTEEEHRMFLLGLQKLGKGDW---RGIARNYVVSRTPTQVASHAQKYF 142
S S +KK + WT+ H +FL ++ +G + +A V T VASH QKY
Sbjct: 215 SMSQPAKKKKIQWTDSLHDLFLQAIRHIGLDKAVPKKILAFMSVPYLTRENVASHLQKYR 274
Query: 143 IRQSNVSRRKRRSSLFDIVADEPLDT 168
I RR L+ +++D +D+
Sbjct: 275 I----FLRRVAEQGLYSMLSDRGIDS 296
>sp|A0JMR6|MYSM1_XENLA Histone H2A deubiquitinase MYSM1 OS=Xenopus laevis GN=mysm1 PE=2
SV=1
Length = 818
Score = 38.1 bits (87), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 96 VPWTEEEHRMFLLGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKYF 142
V WT+EE +F GL G+ W IAR + SR+ QV ++A+ YF
Sbjct: 110 VKWTKEEKNLFEQGLATFGRR-WTSIAR-LIGSRSVLQVKNYARHYF 154
>sp|Q5RBN9|TAD2B_PONAB Transcriptional adapter 2-beta OS=Pongo abelii GN=TADA2B PE=2 SV=1
Length = 420
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 98 WTEEEHRMFLLGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKYFI 143
WT E ++ L +++ G G+W +A + SRTP +V H +I
Sbjct: 70 WTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYI 115
>sp|Q86TJ2|TAD2B_HUMAN Transcriptional adapter 2-beta OS=Homo sapiens GN=TADA2B PE=1 SV=2
Length = 420
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 98 WTEEEHRMFLLGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKYFI 143
WT E ++ L +++ G G+W +A + SRTP +V H +I
Sbjct: 70 WTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYI 115
>sp|Q15554|TERF2_HUMAN Telomeric repeat-binding factor 2 OS=Homo sapiens GN=TERF2 PE=1
SV=2
Length = 500
Score = 37.4 bits (85), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 84 PGSSSSRERKKGVPWTEEEHRMFLLGLQKLGKGDWRGIARNY-VVSRTPTQV 134
P S+ K WT EE G+QK G+G+W I++NY V+RT +
Sbjct: 436 PDEDSTTNITKKQKWTVEESEWVKAGVQKYGEGNWAAISKNYPFVNRTAVMI 487
>sp|Q503N9|TAD2B_DANRE Transcriptional adapter 2-beta OS=Danio rerio GN=tada2b PE=2 SV=1
Length = 486
Score = 34.7 bits (78), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 98 WTEEEHRMFLLGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKYFI 143
WT E + L +++ G G+W +A + SRTP +V H +I
Sbjct: 70 WTSREEQSLLDAIEQYGFGNWEDMAAHVGASRTPQEVMDHYVSMYI 115
>sp|Q8GUN5|PHL1_ARATH Protein PHR1-LIKE 1 OS=Arabidopsis thaliana GN=PHL1 PE=1 SV=1
Length = 413
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 48/111 (43%), Gaps = 13/111 (11%)
Query: 43 NLSHYAGSTSGHNNNNASNTP--DSP--GETPDHHADGYASEDFVPG---SSSSRERKKG 95
N S G +S HN N+ TP D P T + +SED + G SSS K+
Sbjct: 174 NWSELLGDSSSHNPNSEIPTPFLDVPRLDITANQQQQMVSSEDQLSGRNSSSSVATSKQR 233
Query: 96 VPWTEEEHRMFLLGLQKLGKGDWRGIARNYVV-----SRTPTQVASHAQKY 141
+ WT E H F+ + +LG G R + + T V SH QKY
Sbjct: 234 MRWTPELHEAFVEAVNQLG-GSERATPKAVLKLLNNPGLTIYHVKSHLQKY 283
>sp|Q9FFH0|GLK2_ARATH Transcription activator GLK2 OS=Arabidopsis thaliana GN=GLK2 PE=2
SV=1
Length = 386
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 91 ERKKGVPWTEEEHRMFLLGLQKLGKGDW---RGIARNYVVSRTPTQVASHAQKYFIRQSN 147
++K V WT E HR F+ +++LG R + V S T VASH QKY + +
Sbjct: 145 KKKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQKYRSHRKH 204
Query: 148 VSRRKRRSSLFDI 160
+ R+ ++ +++
Sbjct: 205 LLAREAEAASWNL 217
>sp|Q10274|MU152_SCHPO Meiotically up-regulated gene 152 protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mug152 PE=1 SV=1
Length = 390
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 83 VPG--SSSSRERKKGVPWTEEEHRMFLLGLQKLGKGDWRGIA---RNYVVSRTPTQV 134
VPG ++ RK V WTE+E L G Q G G+W+ I R + +R+P +
Sbjct: 41 VPGFERKPTKVRKPRVKWTEKETNDLLRGCQIHGVGNWKKILLDERFHFTNRSPNDL 97
>sp|Q5NAN5|GLK2_ORYSJ Probable transcription factor GLK2 OS=Oryza sativa subsp. japonica
GN=GLK2 PE=2 SV=1
Length = 539
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 85 GSSSSRERKKGVPWTEEEHRMFLLGLQKLGKGDW---RGIARNYVVSRTPTQVASHAQKY 141
G +S +RK V WT E HR F+ +++LG R + + T +ASH QKY
Sbjct: 207 GKNSHGKRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILELMGIECLTRHNIASHLQKY 266
Query: 142 FIRQSNVSRRKRRSS 156
+ ++ R+ ++
Sbjct: 267 RSHRKHLMAREAEAA 281
>sp|Q9SIV3|GLK1_ARATH Transcription activator GLK1 OS=Arabidopsis thaliana GN=GLK1 PE=2
SV=2
Length = 420
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 10/85 (11%)
Query: 86 SSSSRERKKGVPWTEEEHRMFLLGLQKLGKGDW---RGIARNYVVSRTPTQVASHAQKY- 141
S++ +RK V WT E HR F+ +++LG R + V T VASH QKY
Sbjct: 146 SNNEGKRKVKVDWTPELHRRFVEAVEQLGVDKAVPSRILELMGVHCLTRHNVASHLQKYR 205
Query: 142 ------FIRQSNVSRRKRRSSLFDI 160
R++ + R+ ++ +
Sbjct: 206 SHRKHLLAREAEAANWTRKRHIYGV 230
>sp|O35144|TERF2_MOUSE Telomeric repeat-binding factor 2 OS=Mus musculus GN=Terf2 PE=1
SV=3
Length = 541
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 84 PGSSSSRERKKGVPWTEEEHRMFLLGLQKLGKGDWRGIARNY-VVSRTPTQV 134
PG S + WT EE G++K G+G+W I+++Y V+RT +
Sbjct: 477 PGEDRSSSLTRKQKWTIEESEWVKDGVRKYGEGNWAAISKSYPFVNRTAVMI 528
>sp|O75478|TAD2A_HUMAN Transcriptional adapter 2-alpha OS=Homo sapiens GN=TADA2A PE=1 SV=3
Length = 443
Score = 33.1 bits (74), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 98 WTEEEHRMFLLGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKYFI 143
WT +E L + G G+W+ +A N + ++T + H K+FI
Sbjct: 75 WTAQEEMALLEAVMDCGFGNWQDVA-NQMCTKTKEECEKHYMKHFI 119
>sp|Q3SZP8|TAD2A_BOVIN Transcriptional adapter 2-alpha OS=Bos taurus GN=TADA2A PE=2 SV=1
Length = 443
Score = 33.1 bits (74), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 98 WTEEEHRMFLLGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKYFI 143
WT +E L + G G+W+ +A N + ++T + H K+FI
Sbjct: 75 WTAQEEMALLEAVMDCGFGNWQDVA-NQMCTKTKEECEKHYMKHFI 119
>sp|Q7Y0W5|EHD1_ORYSJ Two-component response regulator EHD1 OS=Oryza sativa subsp.
japonica GN=EHD1 PE=1 SV=1
Length = 341
Score = 33.1 bits (74), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 93 KKGVPWTEEEHRMFLLGLQKLGKG-----DWRGIARNYVVSRTPTQVASHAQKYF--IRQ 145
K + WT + HR F+ + LG+ GI + V T QVASH QKY +++
Sbjct: 198 KSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMK--VKHLTREQVASHLQKYRMQLKK 255
Query: 146 SNVSRRKRRSSLFDIVADEPLDTPAASQ 173
S + K ++L D+ D P+ SQ
Sbjct: 256 SIPTTSKHGATLSSTALDKTQDHPSRSQ 283
>sp|Q6AYE3|TAD2A_RAT Transcriptional adapter 2-alpha OS=Rattus norvegicus GN=Tada2a PE=2
SV=1
Length = 443
Score = 33.1 bits (74), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 98 WTEEEHRMFLLGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKYFI 143
WT +E L + G G+W+ +A N + ++T + H K+FI
Sbjct: 75 WTAQEEMALLEAVMDCGFGNWQDVA-NQMCTKTKEECEKHYMKHFI 119
>sp|Q9P2R6|RERE_HUMAN Arginine-glutamic acid dipeptide repeats protein OS=Homo sapiens
GN=RERE PE=1 SV=2
Length = 1566
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 30/139 (21%)
Query: 73 HADGYASEDFVPGSSSSRERKKGVP------WTEEEHRMFLLGLQKLGKGDWR------- 119
H GY + G + R KK VP WTE+E + F+ GL++ GK +R
Sbjct: 370 HESGYDA-----GKALQRLVKKPVPKLIEKCWTEDEVKRFVKGLRQYGKNFFRIRKELLP 424
Query: 120 ------GIARNYVVSRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDI------VADEPLD 167
I Y +TP +S A + RQ+ R K R++ + + E LD
Sbjct: 425 NKETGELITFYYYWKKTPEAASSRAHRRHRRQAVFRRIKTRTASTPVNTPSRPPSSEFLD 484
Query: 168 TPAASQDLFSANHTQGETQ 186
+AS+D F + ++ E +
Sbjct: 485 LSSASEDDFDSEDSEQELK 503
>sp|Q7Y0W3|EHD1_ORYSI Two-component response regulator EHD1 OS=Oryza sativa subsp. indica
PE=2 SV=1
Length = 341
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 93 KKGVPWTEEEHRMFLLGLQKLGKG-----DWRGIARNYVVSRTPTQVASHAQKYF--IRQ 145
K + WT + HR F+ + LG+ GI + V T QVASH QKY +++
Sbjct: 198 KSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMK--VKHLTREQVASHLQKYRMQLKK 255
Query: 146 SNVSRRKRRSSLFDIVADEPLDTPAASQ 173
S + K ++L D+ D P+ SQ
Sbjct: 256 SIPTTSKHGATLSSTALDKTQDHPSRSQ 283
>sp|Q8CHV6|TAD2A_MOUSE Transcriptional adapter 2-alpha OS=Mus musculus GN=Tada2a PE=1 SV=1
Length = 443
Score = 32.7 bits (73), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 98 WTEEEHRMFLLGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKYFI 143
WT +E L + G G+W+ +A N + ++T + H K+FI
Sbjct: 75 WTAQEEMALLEAVMDCGFGNWQDVA-NQMCTKTKEECEKHYMKHFI 119
>sp|P81396|MYB40_ANTMA Myb-related protein 340 OS=Antirrhinum majus GN=MYB340 PE=2 SV=1
Length = 198
Score = 32.7 bits (73), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 81 DFVPGSSSSRERKKGVPWTEEEHRMFLLGLQKLGKGDWRGIARNYVVSRTPTQVASHAQK 140
D P +S E +KG PWT EE + + + G+G W IAR+ + RT
Sbjct: 2 DKKPCNSHDVEVRKG-PWTMEEDLILINFISNHGEGVWNTIARSAGLKRTGKSCRLRWLN 60
Query: 141 YF---IRQSNVS 149
Y +R+ N++
Sbjct: 61 YLRPDVRRGNIT 72
>sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR2 OS=Arabidopsis thaliana
GN=APRR2 PE=2 SV=2
Length = 535
Score = 32.7 bits (73), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 83 VPGSSSSRERKKGVPWTEEEHRMFLLGLQKLGKGDW---RGIARNYVVSRTPTQVASHAQ 139
V G+ +SR K V WT E H+ F+ +++LG R + V + T VASH Q
Sbjct: 289 VSGNKTSR---KKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVGTLTRHNVASHLQ 345
Query: 140 KYFIRQSNV 148
K+ + N+
Sbjct: 346 KFRQHRKNI 354
>sp|P70371|TERF1_MOUSE Telomeric repeat-binding factor 1 OS=Mus musculus GN=Terf1 PE=1
SV=1
Length = 421
Score = 32.7 bits (73), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 92 RKKGVPWTEEEHRMFLLGLQKLGKGDWRGIARNY 125
R+K W EE R+ G++K G+G+W I +Y
Sbjct: 364 RRKRQTWLWEEDRILKCGVKKYGEGNWAKILSHY 397
>sp|P81391|MYB05_ANTMA Myb-related protein 305 OS=Antirrhinum majus GN=MYB305 PE=2 SV=1
Length = 205
Score = 32.7 bits (73), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 81 DFVPGSSSSRERKKGVPWTEEEHRMFLLGLQKLGKGDWRGIARNYVVSRTPTQVASHAQK 140
D P +S E +KG PWT EE + + + G+G W +AR+ + RT
Sbjct: 2 DKKPCNSQDVEVRKG-PWTMEEDLILINYIANHGEGVWNSLARSAGLKRTGKSCRLRWLN 60
Query: 141 YF---IRQSNVS 149
Y +R+ N++
Sbjct: 61 YLRPDVRRGNIT 72
>sp|F4IEY4|TRB5_ARATH Telomere repeat-binding factor 5 OS=Arabidopsis thaliana
GN=At1g72740 PE=2 SV=1
Length = 287
Score = 32.7 bits (73), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 96 VPWTEEEHRMFLLGLQKLGKGDWRGIARN 124
+ WT EE L G++K G G W+ I R+
Sbjct: 6 LKWTAEEEEALLAGIRKHGPGKWKNILRD 34
>sp|P10242|MYB_HUMAN Transcriptional activator Myb OS=Homo sapiens GN=MYB PE=1 SV=2
Length = 640
Score = 32.7 bits (73), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 59 ASNTPDSPGETPDHHADGYASEDFVPGSSSSRERKKGVPWTEEEHRMFLLGLQKLGKGDW 118
+S+ D E DH DG +P S K WT EE +++ G DW
Sbjct: 11 SSDEDDEDFEMCDHDYDG-----LLPKSGKRHLGKTR--WTREEDEKLKKLVEQNGTDDW 63
Query: 119 RGIARNYVVSRTPTQVASHAQKYF 142
+ IA NY+ +RT Q QK
Sbjct: 64 KVIA-NYLPNRTDVQCQHRWQKVL 86
>sp|P46200|MYB_BOVIN Transcriptional activator Myb OS=Bos taurus GN=MYB PE=2 SV=1
Length = 640
Score = 32.7 bits (73), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 59 ASNTPDSPGETPDHHADGYASEDFVPGSSSSRERKKGVPWTEEEHRMFLLGLQKLGKGDW 118
+S+ D E DH DG +P S K WT EE +++ G DW
Sbjct: 11 SSDEDDEDIEMCDHDYDG-----LLPKSGKRHLGKTR--WTREEDEKLKKLVEQNGTDDW 63
Query: 119 RGIARNYVVSRTPTQVASHAQKYF 142
+ IA NY+ +RT Q QK
Sbjct: 64 KVIA-NYLPNRTDVQCQHRWQKVL 86
>sp|Q80TZ9|RERE_MOUSE Arginine-glutamic acid dipeptide repeats protein OS=Mus musculus
GN=Rere PE=1 SV=3
Length = 1558
Score = 32.3 bits (72), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 25/127 (19%)
Query: 85 GSSSSRERKKGVP------WTEEEHRMFLLGLQKLGKGDWR-------------GIARNY 125
G + R KK VP WTE+E + F+ GL++ GK +R I Y
Sbjct: 377 GKALQRLVKKPVPKLIEKCWTEDEVKRFVKGLRQYGKNFFRIRKELLPSKETGELITFYY 436
Query: 126 VVSRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDI------VADEPLDTPAASQDLFSAN 179
+TP +S A + RQ+ R K R++ + + E LD +AS+D F +
Sbjct: 437 YWKKTPEAASSRAHRRHRRQAVFRRIKTRTASTPVNTPSRPPSSEFLDLSSASEDDFDSE 496
Query: 180 HTQGETQ 186
++ E +
Sbjct: 497 DSEQELK 503
>sp|P06876|MYB_MOUSE Transcriptional activator Myb OS=Mus musculus GN=Myb PE=1 SV=2
Length = 636
Score = 32.3 bits (72), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 59 ASNTPDSPGETPDHHADGYASEDFVPGSSSSRERKKGVPWTEEEHRMFLLGLQKLGKGDW 118
+S+ D E DH DG +P S K WT EE +++ G DW
Sbjct: 11 SSDEDDEDIEMCDHDYDG-----LLPKSGKRHLGKTR--WTREEDEKLKKLVEQNGTDDW 63
Query: 119 RGIARNYVVSRTPTQVASHAQKYF 142
+ IA NY+ +RT Q QK
Sbjct: 64 KVIA-NYLPNRTDVQCQHRWQKVL 86
>sp|Q9FGT7|ARR18_ARATH Two-component response regulator ARR18 OS=Arabidopsis thaliana
GN=ARR18 PE=2 SV=2
Length = 635
Score = 32.3 bits (72), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 85 GSSSSRERKKGVPWTEEEHRMFLLGLQKLGKGDW---RGIARNYVVSRTPTQVASHAQKY 141
G S +K V W++E H+ F+ +Q+LG + + + T VASH QKY
Sbjct: 186 GDGSGTRKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSIEGLTRENVASHLQKY 245
Query: 142 FIRQSNVSRRKRRS 155
+ + ++++
Sbjct: 246 RLYLKKIDEGQQQN 259
>sp|Q62901|RERE_RAT Arginine-glutamic acid dipeptide repeats protein OS=Rattus
norvegicus GN=Rere PE=2 SV=2
Length = 1559
Score = 32.3 bits (72), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 25/127 (19%)
Query: 85 GSSSSRERKKGVP------WTEEEHRMFLLGLQKLGKGDWR-------------GIARNY 125
G + R KK VP WTE+E + F+ GL++ GK +R I Y
Sbjct: 376 GKALQRLVKKPVPKLIEKCWTEDEVKRFVKGLRQYGKNFFRIRKELLPNKETGELITFYY 435
Query: 126 VVSRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDI------VADEPLDTPAASQDLFSAN 179
+TP +S A + RQ+ R K R++ + + E LD +AS+D F +
Sbjct: 436 YWKKTPEAASSRAHRRHRRQAVFRRIKTRTASTPVNTPSRPPSSEFLDLSSASEDDFDSE 495
Query: 180 HTQGETQ 186
++ E +
Sbjct: 496 DSEQELK 502
>sp|Q9ZVD3|ARR13_ARATH Putative two-component response regulator ARR13 OS=Arabidopsis
thaliana GN=ARR13 PE=2 SV=2
Length = 572
Score = 32.3 bits (72), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 92 RKKGVPWTEEEHRMFLLGLQKLGKGDW---RGIARNYVVSRTPTQVASHAQKYFIRQSNV 148
+KK + WT +FL +Q +G + +A V T VASH QKY + V
Sbjct: 224 KKKKIWWTNPLQDLFLQAIQHIGYDKVVPKKILAIMNVPYLTRENVASHLQKYRLFVKRV 283
Query: 149 SRRKRRSSLFD 159
+ R S L D
Sbjct: 284 VHQGRFSMLSD 294
>sp|Q7XBH4|MYB4_ORYSJ Myb-related protein Myb4 OS=Oryza sativa subsp. japonica GN=MYB4
PE=2 SV=2
Length = 257
Score = 32.3 bits (72), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 93 KKGVPWTEEEHRMFLLGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKYF---IRQSNVS 149
KKG PWT EE ++ + +Q+ G G+WR + + + R Y I++ N S
Sbjct: 13 KKG-PWTPEEDKVLVAHIQRHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFS 71
Query: 150 RRK 152
+ +
Sbjct: 72 KEE 74
>sp|P62598|ARR12_ARATH Two-component response regulator ARR12 OS=Arabidopsis thaliana
GN=ARR12 PE=2 SV=2
Length = 596
Score = 32.0 bits (71), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 88 SSRERKKGVPWTEEEHRMFLLGLQKLG--KGDWRGIARNYVVSR-TPTQVASHAQKYFIR 144
S ++K+ V WT E H+ F+ + +LG K + I V + T VASH QK+ +
Sbjct: 190 SCAQKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVASHLQKFRLY 249
Query: 145 QSNVS 149
+S
Sbjct: 250 LKRIS 254
>sp|Q9XZC0|LCTA_LATTR Alpha-latrocrustotoxin-Lt1a (Fragment) OS=Latrodectus
tredecimguttatus PE=2 SV=2
Length = 1413
Score = 31.6 bits (70), Expect = 8.3, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 11/66 (16%)
Query: 29 RLTDGSIRKSAS--MGNLSHYAGSTSGHN---------NNNASNTPDSPGETPDHHADGY 77
+L D + AS MG S +A +T+G++ NN N PD G TP H A
Sbjct: 480 KLIDSGAQVGASFEMGRKSIHASATAGNDDVARLLLAKNNGLLNVPDKNGYTPLHIASER 539
Query: 78 ASEDFV 83
+ DFV
Sbjct: 540 KNNDFV 545
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.126 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 135,836,269
Number of Sequences: 539616
Number of extensions: 6043289
Number of successful extensions: 17274
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 108
Number of HSP's that attempted gapping in prelim test: 17128
Number of HSP's gapped (non-prelim): 243
length of query: 333
length of database: 191,569,459
effective HSP length: 118
effective length of query: 215
effective length of database: 127,894,771
effective search space: 27497375765
effective search space used: 27497375765
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 61 (28.1 bits)