Query 019951
Match_columns 333
No_of_seqs 252 out of 1976
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 09:32:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019951.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019951hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o0f_A Putative metal-dependen 100.0 3.6E-54 1.2E-58 410.7 28.4 238 71-318 11-255 (301)
2 2yb1_A Amidohydrolase; HET: AM 100.0 1.2E-45 4E-50 350.1 27.7 236 73-317 2-241 (292)
3 3e38_A Two-domain protein cont 99.9 6.2E-24 2.1E-28 205.7 12.0 153 70-317 16-187 (343)
4 1m65_A Hypothetical protein YC 99.8 1.4E-19 4.9E-24 164.8 13.8 165 73-317 2-185 (245)
5 2yxo_A Histidinol phosphatase; 99.8 1.5E-19 5.1E-24 166.5 10.4 67 74-140 1-85 (267)
6 2anu_A Hypothetical protein TM 99.8 1.6E-18 5.5E-23 160.2 12.4 147 70-317 17-198 (255)
7 2hnh_A DNA polymerase III alph 99.6 4.2E-16 1.4E-20 167.1 11.2 97 73-174 5-103 (910)
8 2hpi_A DNA polymerase III alph 99.6 4.3E-15 1.5E-19 162.3 14.1 100 73-174 6-115 (1220)
9 3f2b_A DNA-directed DNA polyme 99.6 1.6E-15 5.4E-20 163.5 9.8 104 71-176 113-228 (1041)
10 3qy7_A Tyrosine-protein phosph 99.5 1.5E-14 5.2E-19 134.9 9.5 162 75-317 2-187 (262)
11 2wje_A CPS4B, tyrosine-protein 99.5 1.8E-14 6E-19 132.4 9.5 163 74-317 5-196 (247)
12 2w9m_A Polymerase X; SAXS, DNA 99.5 3.4E-13 1.2E-17 138.6 20.0 69 71-140 325-406 (578)
13 3b0x_A DNA polymerase beta fam 99.5 3E-12 1E-16 131.4 22.0 200 72-323 336-557 (575)
14 3dcp_A Histidinol-phosphatase; 99.3 2E-11 6.9E-16 114.9 10.9 203 73-305 1-265 (283)
15 1v77_A PH1877P, hypothetical p 98.2 4.9E-06 1.7E-10 74.7 9.7 53 74-139 9-62 (212)
16 2y1h_A Putative deoxyribonucle 91.6 0.28 9.5E-06 44.1 6.1 62 72-134 4-65 (272)
17 2w9m_A Polymerase X; SAXS, DNA 90.4 0.22 7.4E-06 50.8 4.7 61 254-317 440-509 (578)
18 1zzm_A Putative deoxyribonucle 87.0 1.4 4.7E-05 39.0 7.1 54 73-127 4-57 (259)
19 3rcm_A TATD family hydrolase; 84.2 0.73 2.5E-05 42.7 3.9 61 73-134 2-65 (287)
20 1xwy_A DNAse TATD, deoxyribonu 83.0 1.4 4.8E-05 39.1 5.2 54 73-127 4-57 (264)
21 3dtp_E RLC, myosin regulatory 82.8 1.1 3.9E-05 37.9 4.3 20 84-103 70-89 (196)
22 4gbu_A NADPH dehydrogenase 1; 82.6 2 6.7E-05 41.6 6.4 23 253-275 98-122 (400)
23 2gzx_A Putative TATD related D 81.1 2.3 7.8E-05 37.5 5.8 60 73-134 1-60 (265)
24 2xio_A Putative deoxyribonucle 80.5 1.4 4.6E-05 40.6 4.2 54 73-127 2-65 (301)
25 3gg7_A Uncharacterized metallo 80.4 0.72 2.5E-05 42.1 2.2 49 73-126 2-50 (254)
26 1yix_A Deoxyribonuclease YCFH; 78.2 2.3 7.9E-05 37.5 4.9 60 73-134 2-64 (265)
27 3f4w_A Putative hexulose 6 pho 77.9 3.7 0.00013 35.3 6.0 61 256-317 43-104 (211)
28 4a3u_A NCR, NADH\:flavin oxido 77.1 3.1 0.00011 39.6 5.7 22 253-274 81-104 (358)
29 3ipw_A Hydrolase TATD family p 76.7 1.8 6E-05 41.0 3.8 55 71-126 25-89 (325)
30 3vni_A Xylose isomerase domain 74.8 4.4 0.00015 36.2 5.8 44 278-321 19-65 (294)
31 3lmz_A Putative sugar isomeras 74.2 5.6 0.00019 34.9 6.3 16 301-316 87-102 (257)
32 2eja_A URO-D, UPD, uroporphyri 74.0 1.1 3.9E-05 41.9 1.7 71 251-326 217-287 (338)
33 3b0x_A DNA polymerase beta fam 73.8 2.7 9.2E-05 42.6 4.5 62 254-317 452-522 (575)
34 3gka_A N-ethylmaleimide reduct 73.8 5.3 0.00018 38.2 6.4 22 253-274 89-112 (361)
35 4ab4_A Xenobiotic reductase B; 73.0 5.7 0.00019 38.0 6.4 22 253-274 81-104 (362)
36 3p6l_A Sugar phosphate isomera 72.2 7.6 0.00026 34.0 6.7 36 281-317 68-105 (262)
37 1z41_A YQJM, probable NADH-dep 72.0 6.4 0.00022 36.9 6.4 22 253-274 85-108 (338)
38 3kru_A NADH:flavin oxidoreduct 71.0 6.4 0.00022 37.3 6.1 22 253-274 83-106 (343)
39 3t7v_A Methylornithine synthas 70.6 3.9 0.00013 38.2 4.5 72 253-326 128-212 (350)
40 3gr7_A NADPH dehydrogenase; fl 70.0 4.9 0.00017 38.0 5.1 23 252-274 84-108 (340)
41 3kws_A Putative sugar isomeras 69.8 9.9 0.00034 33.8 7.0 13 252-264 39-51 (287)
42 2zvr_A Uncharacterized protein 68.8 4 0.00014 36.6 4.0 44 279-322 44-87 (290)
43 2x7v_A Probable endonuclease 4 68.8 8.5 0.00029 34.0 6.2 43 277-319 13-63 (287)
44 3l5a_A NADH/flavin oxidoreduct 68.5 5.1 0.00018 39.1 5.0 23 252-274 105-129 (419)
45 3hgj_A Chromate reductase; TIM 68.4 6.6 0.00022 37.1 5.6 23 252-274 82-106 (349)
46 4gxw_A Adenosine deaminase; am 67.9 2.4 8.2E-05 40.9 2.5 41 57-103 17-57 (380)
47 3tjl_A NADPH dehydrogenase; OL 67.2 6.7 0.00023 38.2 5.5 22 253-274 94-117 (407)
48 1qwg_A PSL synthase;, (2R)-pho 67.1 9.6 0.00033 34.8 6.2 68 253-320 57-131 (251)
49 3l5l_A Xenobiotic reductase A; 67.1 6.5 0.00022 37.4 5.3 22 253-274 82-105 (363)
50 3cqj_A L-ribulose-5-phosphate 66.8 9.3 0.00032 34.1 6.1 46 278-323 32-86 (295)
51 2hsa_B 12-oxophytodienoate red 65.6 13 0.00045 35.9 7.2 22 253-274 95-118 (402)
52 3k30_A Histamine dehydrogenase 65.4 8.4 0.00029 39.5 6.1 23 252-274 90-114 (690)
53 1icp_A OPR1, 12-oxophytodienoa 65.4 9.5 0.00033 36.5 6.1 22 253-274 93-116 (376)
54 2q02_A Putative cytoplasmic pr 65.1 10 0.00035 33.1 5.9 67 251-317 19-99 (272)
55 2vc7_A Aryldialkylphosphatase; 64.9 6.5 0.00022 35.6 4.7 64 73-136 17-96 (314)
56 3ngf_A AP endonuclease, family 64.5 8.7 0.0003 33.9 5.4 42 279-322 26-67 (269)
57 3inp_A D-ribulose-phosphate 3- 64.3 11 0.00037 34.1 6.0 61 255-318 75-136 (246)
58 2qul_A D-tagatose 3-epimerase; 62.7 8.4 0.00029 34.0 4.9 43 279-321 20-65 (290)
59 3ktc_A Xylose isomerase; putat 62.5 4.9 0.00017 37.0 3.4 40 279-318 36-76 (333)
60 2gou_A Oxidoreductase, FMN-bin 61.5 15 0.00051 34.9 6.7 22 253-274 83-106 (365)
61 1akh_A Protein (mating-type pr 61.3 10 0.00034 26.1 4.1 24 19-42 2-25 (61)
62 3dx5_A Uncharacterized protein 59.6 7.9 0.00027 34.3 4.1 67 251-318 15-99 (286)
63 3cny_A Inositol catabolism pro 59.5 7.7 0.00026 34.5 4.1 66 250-317 30-104 (301)
64 3qc0_A Sugar isomerase; TIM ba 59.5 3.1 0.00011 36.6 1.4 77 251-327 18-107 (275)
65 3qxb_A Putative xylose isomera 59.4 9.7 0.00033 34.6 4.8 44 280-323 39-90 (316)
66 3l23_A Sugar phosphate isomera 59.4 7.5 0.00026 35.4 4.0 47 279-325 32-81 (303)
67 1j6o_A TATD-related deoxyribon 59.0 6.1 0.00021 35.3 3.3 60 73-134 12-71 (268)
68 1qtw_A Endonuclease IV; DNA re 59.0 18 0.00063 31.7 6.5 43 277-319 13-63 (285)
69 1r3s_A URO-D, uroporphyrinogen 58.0 3.7 0.00013 38.9 1.7 70 251-325 235-312 (367)
70 1vyr_A Pentaerythritol tetrani 57.8 14 0.00047 35.2 5.7 23 253-275 83-107 (364)
71 3kws_A Putative sugar isomeras 56.7 17 0.00057 32.2 5.9 43 88-130 38-80 (287)
72 2r14_A Morphinone reductase; H 56.5 19 0.00066 34.4 6.5 22 253-274 87-110 (377)
73 2h6r_A Triosephosphate isomera 55.5 10 0.00035 33.3 4.1 55 265-320 53-115 (219)
74 1i60_A IOLI protein; beta barr 55.2 7.7 0.00026 33.9 3.2 67 251-317 14-98 (278)
75 3e2v_A 3'-5'-exonuclease; stru 55.2 11 0.00037 36.7 4.5 54 72-126 12-75 (401)
76 1bxb_A Xylose isomerase; xylos 54.5 25 0.00087 33.1 7.0 45 278-322 35-88 (387)
77 1xim_A D-xylose isomerase; iso 53.6 23 0.00077 33.6 6.5 45 278-322 35-88 (393)
78 3cjp_A Predicted amidohydrolas 53.4 22 0.00076 31.3 6.0 35 73-112 3-37 (272)
79 3aam_A Endonuclease IV, endoiv 53.4 20 0.0007 31.3 5.8 13 252-264 15-27 (270)
80 3tva_A Xylose isomerase domain 53.1 21 0.00071 31.6 5.9 44 279-322 24-70 (290)
81 3rys_A Adenosine deaminase 1; 53.0 7.5 0.00026 36.8 2.9 29 72-103 13-41 (343)
82 1o94_A Tmadh, trimethylamine d 52.8 18 0.00061 37.4 6.0 22 253-274 86-109 (729)
83 3cyv_A URO-D, UPD, uroporphyri 52.4 4.1 0.00014 38.2 1.0 70 251-325 225-299 (354)
84 2qw5_A Xylose isomerase-like T 52.4 22 0.00076 32.4 6.1 39 280-318 35-80 (335)
85 3ajx_A 3-hexulose-6-phosphate 52.2 27 0.00091 29.6 6.2 44 253-296 66-111 (207)
86 3u0h_A Xylose isomerase domain 51.0 5.1 0.00017 35.3 1.3 67 251-317 16-98 (281)
87 1u83_A Phosphosulfolactate syn 50.9 35 0.0012 31.5 6.9 66 253-319 82-154 (276)
88 3s5o_A 4-hydroxy-2-oxoglutarat 50.7 51 0.0017 30.3 8.2 63 255-317 71-143 (307)
89 1ps9_A 2,4-dienoyl-COA reducta 50.6 14 0.00048 37.7 4.7 23 252-274 82-106 (671)
90 3fkr_A L-2-keto-3-deoxyarabona 50.5 36 0.0012 31.4 7.2 62 256-317 66-138 (309)
91 3obe_A Sugar phosphate isomera 50.5 16 0.00053 33.3 4.6 66 252-317 37-128 (305)
92 3ctl_A D-allulose-6-phosphate 50.4 12 0.00042 33.3 3.8 61 255-318 47-108 (231)
93 3ngf_A AP endonuclease, family 50.1 44 0.0015 29.2 7.5 51 80-131 15-65 (269)
94 1k77_A EC1530, hypothetical pr 49.3 9.5 0.00032 33.2 2.8 43 278-322 17-59 (260)
95 3iar_A Adenosine deaminase; pu 49.1 8.4 0.00029 36.9 2.6 30 72-104 6-35 (367)
96 2ekc_A AQ_1548, tryptophan syn 48.4 39 0.0013 30.3 6.9 48 254-301 5-56 (262)
97 3pao_A Adenosine deaminase; st 48.2 8.8 0.0003 36.0 2.6 29 73-104 11-39 (326)
98 4i6k_A Amidohydrolase family p 47.7 17 0.00058 32.8 4.4 37 72-108 25-73 (294)
99 3iix_A Biotin synthetase, puta 46.8 26 0.00087 32.2 5.5 62 253-317 119-192 (348)
100 3jr2_A Hexulose-6-phosphate sy 46.7 30 0.001 29.9 5.7 16 281-296 75-90 (218)
101 3aal_A Probable endonuclease 4 46.4 28 0.00095 31.2 5.6 40 279-318 21-68 (303)
102 3i5g_B Myosin regulatory light 45.9 39 0.0013 27.1 6.0 43 25-103 6-48 (153)
103 1r30_A Biotin synthase; SAM ra 45.4 28 0.00097 32.5 5.7 71 253-326 136-218 (369)
104 2ob3_A Parathion hydrolase; me 45.2 28 0.00096 32.2 5.6 60 73-132 16-92 (330)
105 1olt_A Oxygen-independent copr 45.2 41 0.0014 32.6 7.0 86 237-326 109-214 (457)
106 2g0w_A LMO2234 protein; putati 44.5 9.4 0.00032 34.3 2.1 73 251-326 36-126 (296)
107 3h4u_A Amidohydrolase; signatu 43.8 42 0.0014 31.8 6.7 63 73-137 88-184 (479)
108 3dz1_A Dihydrodipicolinate syn 43.5 46 0.0016 30.7 6.7 61 256-316 66-132 (313)
109 2zds_A Putative DNA-binding pr 43.0 46 0.0016 29.9 6.6 44 278-321 17-69 (340)
110 3nav_A Tryptophan synthase alp 42.5 53 0.0018 29.9 6.9 103 206-319 28-153 (271)
111 2mys_B Myosin; muscle protein, 42.4 33 0.0011 27.1 4.9 40 27-102 17-56 (166)
112 3eeg_A 2-isopropylmalate synth 42.1 32 0.0011 32.1 5.4 38 278-315 30-67 (325)
113 3ewb_X 2-isopropylmalate synth 41.7 24 0.00083 32.4 4.5 37 279-315 30-66 (293)
114 2ehh_A DHDPS, dihydrodipicolin 41.6 89 0.0031 28.4 8.3 62 256-317 58-127 (294)
115 2pgf_A Adenosine deaminase; me 41.1 16 0.00054 34.6 3.2 28 73-103 45-72 (371)
116 2hk0_A D-psicose 3-epimerase; 41.0 15 0.00053 33.0 3.0 41 279-320 40-83 (309)
117 2yxg_A DHDPS, dihydrodipicolin 40.5 84 0.0029 28.5 8.0 62 256-317 58-127 (289)
118 1muw_A Xylose isomerase; atomi 40.0 34 0.0012 32.2 5.3 45 278-322 35-88 (386)
119 3l21_A DHDPS, dihydrodipicolin 40.0 83 0.0028 28.9 7.9 67 251-317 65-142 (304)
120 3m5v_A DHDPS, dihydrodipicolin 39.8 98 0.0034 28.2 8.3 67 251-317 57-135 (301)
121 4e38_A Keto-hydroxyglutarate-a 39.7 60 0.002 29.0 6.6 60 253-315 24-83 (232)
122 1j93_A UROD, uroporphyrinogen 39.7 9.1 0.00031 35.8 1.2 70 251-325 231-303 (353)
123 2vc6_A MOSA, dihydrodipicolina 39.6 67 0.0023 29.2 7.1 54 264-317 68-127 (292)
124 1vkf_A Glycerol uptake operon 39.4 99 0.0034 26.8 7.7 65 251-324 43-110 (188)
125 3ovp_A Ribulose-phosphate 3-ep 39.3 31 0.0011 30.5 4.6 60 255-317 52-113 (228)
126 1xla_A D-xylose isomerase; iso 38.4 37 0.0013 32.0 5.3 44 278-321 35-87 (394)
127 3tsm_A IGPS, indole-3-glycerol 37.9 80 0.0027 28.8 7.3 64 255-320 110-173 (272)
128 1bf6_A Phosphotriesterase homo 37.7 28 0.00096 30.6 4.1 64 73-136 6-82 (291)
129 3ur8_A Glucan endo-1,3-beta-D- 37.6 60 0.0021 30.4 6.5 48 85-137 12-59 (323)
130 3flu_A DHDPS, dihydrodipicolin 37.6 93 0.0032 28.3 7.8 62 256-317 65-134 (297)
131 3cpr_A Dihydrodipicolinate syn 37.3 1.2E+02 0.004 27.8 8.4 62 256-317 74-143 (304)
132 1k77_A EC1530, hypothetical pr 37.3 45 0.0015 28.7 5.3 44 87-131 14-57 (260)
133 3tak_A DHDPS, dihydrodipicolin 37.1 85 0.0029 28.5 7.4 67 251-317 51-128 (291)
134 3daq_A DHDPS, dihydrodipicolin 35.9 86 0.003 28.5 7.2 62 256-317 60-129 (292)
135 1xky_A Dihydrodipicolinate syn 35.8 1E+02 0.0035 28.1 7.8 54 264-317 80-139 (301)
136 3vni_A Xylose isomerase domain 35.6 51 0.0018 28.9 5.5 59 74-132 3-65 (294)
137 3na8_A Putative dihydrodipicol 35.4 84 0.0029 29.0 7.1 62 256-317 82-151 (315)
138 3qja_A IGPS, indole-3-glycerol 35.0 86 0.0029 28.4 7.0 63 255-319 103-165 (272)
139 1f6k_A N-acetylneuraminate lya 34.9 1.1E+02 0.0038 27.7 7.8 54 264-317 72-131 (293)
140 2q02_A Putative cytoplasmic pr 34.6 1E+02 0.0034 26.5 7.2 45 86-130 17-67 (272)
141 3jx9_A Putative phosphoheptose 34.5 20 0.00069 30.5 2.5 29 86-114 88-118 (170)
142 2wkj_A N-acetylneuraminate lya 34.3 1.1E+02 0.0038 27.9 7.7 61 256-316 69-137 (303)
143 3si9_A DHDPS, dihydrodipicolin 34.3 93 0.0032 28.7 7.2 62 256-317 80-149 (315)
144 1vhc_A Putative KHG/KDPG aldol 34.0 1.5E+02 0.0053 25.8 8.3 70 251-325 5-74 (224)
145 1tqj_A Ribulose-phosphate 3-ep 34.0 50 0.0017 29.0 5.1 60 255-317 52-113 (230)
146 3qze_A DHDPS, dihydrodipicolin 33.9 1.2E+02 0.004 28.0 7.8 54 264-317 91-150 (314)
147 1i60_A IOLI protein; beta barr 33.8 1E+02 0.0036 26.4 7.2 45 87-131 13-63 (278)
148 1o5k_A DHDPS, dihydrodipicolin 33.4 99 0.0034 28.3 7.3 54 264-317 80-139 (306)
149 2inf_A URO-D, UPD, uroporphyri 32.9 19 0.00066 33.7 2.3 69 251-325 231-300 (359)
150 4f0r_A 5-methylthioadenosine/S 32.9 79 0.0027 29.5 6.7 61 73-137 65-155 (447)
151 2r8w_A AGR_C_1641P; APC7498, d 32.7 1.1E+02 0.0037 28.5 7.5 54 264-317 102-161 (332)
152 3d0c_A Dihydrodipicolinate syn 32.2 1.2E+02 0.0042 27.8 7.7 63 256-320 70-140 (314)
153 3kts_A Glycerol uptake operon 31.9 1.8E+02 0.0061 25.1 8.2 67 249-324 39-109 (192)
154 1w0m_A TIM, triosephosphate is 31.8 47 0.0016 29.5 4.5 39 282-320 78-118 (226)
155 3rc1_A Sugar 3-ketoreductase; 31.8 1.6E+02 0.0056 26.9 8.6 44 253-296 129-176 (350)
156 4dzh_A Amidohydrolase; adenosi 31.6 86 0.0029 29.8 6.8 61 73-137 74-164 (472)
157 4dyk_A Amidohydrolase; adenosi 31.5 68 0.0023 30.0 5.9 61 73-137 67-157 (451)
158 2rfg_A Dihydrodipicolinate syn 31.4 95 0.0032 28.3 6.7 54 264-317 68-127 (297)
159 3nqb_A Adenine deaminase 2; PS 31.4 18 0.00062 36.7 1.9 59 73-134 90-154 (608)
160 3ble_A Citramalate synthase fr 31.3 41 0.0014 31.4 4.3 34 280-313 45-79 (337)
161 2yxb_A Coenzyme B12-dependent 31.1 84 0.0029 25.9 5.8 49 85-133 53-106 (161)
162 3lnp_A Amidohydrolase family p 30.9 1E+02 0.0035 29.0 7.1 61 73-137 87-177 (468)
163 3em5_A Beta-1,3-glucanase; gly 30.6 77 0.0026 29.6 6.0 47 85-136 11-57 (316)
164 3e58_A Putative beta-phosphogl 30.6 2E+02 0.0068 22.7 9.3 131 189-326 30-170 (214)
165 2v9d_A YAGE; dihydrodipicolini 30.4 1.2E+02 0.0042 28.3 7.4 54 264-317 99-158 (343)
166 3hq1_A 2-isopropylmalate synth 30.4 66 0.0023 33.1 5.9 44 279-323 96-139 (644)
167 3rmj_A 2-isopropylmalate synth 30.3 39 0.0013 32.2 3.9 36 279-314 37-72 (370)
168 2dvt_A Thermophilic reversible 30.0 96 0.0033 27.6 6.5 70 255-325 83-166 (327)
169 3qfe_A Putative dihydrodipicol 29.9 1.1E+02 0.0038 28.2 7.0 54 264-317 79-140 (318)
170 4exq_A UPD, URO-D, uroporphyri 29.8 7.5 0.00025 37.0 -1.2 71 251-326 235-310 (368)
171 3jr2_A Hexulose-6-phosphate sy 29.6 73 0.0025 27.4 5.4 53 71-130 60-112 (218)
172 1yx1_A Hypothetical protein PA 29.6 29 0.00099 30.3 2.8 74 253-327 25-108 (264)
173 1914_A Signal recognition part 29.4 6.3 0.00022 35.6 -1.7 26 8-33 114-139 (232)
174 3sho_A Transcriptional regulat 29.3 38 0.0013 27.9 3.3 26 87-112 100-125 (187)
175 2f6k_A Metal-dependent hydrola 29.2 38 0.0013 30.0 3.5 36 73-108 2-55 (307)
176 2zds_A Putative DNA-binding pr 29.1 1.2E+02 0.0042 27.0 7.1 45 87-131 14-68 (340)
177 3e96_A Dihydrodipicolinate syn 29.0 1.2E+02 0.0041 27.8 7.1 63 256-320 70-140 (316)
178 1x92_A APC5045, phosphoheptose 28.9 36 0.0012 28.5 3.1 29 83-111 122-150 (199)
179 2ztj_A Homocitrate synthase; ( 28.8 57 0.0019 31.1 4.9 38 279-317 28-65 (382)
180 2ojp_A DHDPS, dihydrodipicolin 28.8 91 0.0031 28.3 6.1 54 264-317 69-128 (292)
181 1xx1_A Smase I, sphingomyelina 28.7 37 0.0013 30.4 3.4 27 266-295 7-33 (285)
182 1hg3_A Triosephosphate isomera 28.7 45 0.0015 29.6 3.8 62 258-320 52-121 (225)
183 3vk5_A MOEO5; TIM barrel, tran 28.7 1.9E+02 0.0065 26.6 8.2 66 256-324 30-103 (286)
184 3lmz_A Putative sugar isomeras 28.6 71 0.0024 27.6 5.2 56 73-131 18-78 (257)
185 2qul_A D-tagatose 3-epimerase; 28.5 80 0.0027 27.4 5.5 45 88-132 17-65 (290)
186 4ay7_A Methylcobalamin\: coenz 28.4 38 0.0013 31.5 3.5 65 259-326 235-302 (348)
187 2yva_A DNAA initiator-associat 28.3 38 0.0013 28.2 3.1 28 84-111 119-146 (196)
188 1nvm_A HOA, 4-hydroxy-2-oxoval 27.4 95 0.0033 28.9 6.1 66 251-318 67-135 (345)
189 2o55_A Putative glycerophospho 27.4 1E+02 0.0036 27.0 6.1 44 254-298 202-246 (258)
190 2f6k_A Metal-dependent hydrola 27.1 84 0.0029 27.7 5.5 71 255-326 79-157 (307)
191 2hmc_A AGR_L_411P, dihydrodipi 26.8 1.4E+02 0.0049 27.9 7.2 61 256-317 84-152 (344)
192 1aq0_A 1,3-1,4-beta-glucanase; 26.8 1.1E+02 0.0038 28.3 6.3 48 85-137 10-57 (306)
193 2wvv_A Alpha-L-fucosidase; alp 26.5 77 0.0026 31.0 5.4 52 85-138 75-147 (450)
194 3vnd_A TSA, tryptophan synthas 26.4 1.3E+02 0.0046 27.1 6.7 35 253-290 137-172 (267)
195 1fjl_A Paired protein; DNA-bin 26.2 1.5E+02 0.005 21.3 5.8 24 20-43 16-39 (81)
196 1i4n_A Indole-3-glycerol phosp 26.1 1E+02 0.0035 27.7 5.8 63 256-320 92-154 (251)
197 3a5f_A Dihydrodipicolinate syn 26.1 86 0.003 28.4 5.4 54 264-317 69-128 (291)
198 3fwb_A Cell division control p 25.5 1.2E+02 0.004 23.3 5.5 47 21-103 9-55 (161)
199 3eb2_A Putative dihydrodipicol 25.3 85 0.0029 28.7 5.2 54 264-317 72-131 (300)
200 1mxs_A KDPG aldolase; 2-keto-3 25.0 1.9E+02 0.0066 25.2 7.3 69 253-326 16-84 (225)
201 1tk9_A Phosphoheptose isomeras 25.0 41 0.0014 27.7 2.7 24 87-110 123-146 (188)
202 1m3s_A Hypothetical protein YC 24.9 48 0.0016 27.3 3.1 26 87-112 92-117 (186)
203 2ood_A BLR3880 protein; PSI-II 24.9 73 0.0025 30.4 4.9 41 94-136 124-166 (475)
204 2zuv_A Lacto-N-biose phosphory 24.8 52 0.0018 34.3 3.9 39 253-293 293-333 (759)
205 3qvq_A Phosphodiesterase OLEI0 24.7 91 0.0031 27.4 5.2 41 254-298 200-240 (252)
206 2uyg_A 3-dehydroquinate dehydr 24.7 91 0.0031 26.1 4.7 47 253-299 52-102 (149)
207 3ovp_A Ribulose-phosphate 3-ep 24.5 1.2E+02 0.0041 26.6 5.8 58 72-138 64-121 (228)
208 2g0w_A LMO2234 protein; putati 24.4 1.2E+02 0.004 26.9 5.9 46 87-132 35-86 (296)
209 3ff4_A Uncharacterized protein 24.2 86 0.0029 24.8 4.4 38 91-131 72-109 (122)
210 3cny_A Inositol catabolism pro 24.2 1E+02 0.0034 27.0 5.4 46 86-133 29-74 (301)
211 4g9j_C Synthetic peptide, seri 24.1 22 0.00077 20.4 0.6 19 17-35 2-20 (26)
212 2z00_A Dihydroorotase; zinc bi 24.0 69 0.0023 29.6 4.4 59 73-131 50-116 (426)
213 2xhz_A KDSD, YRBH, arabinose 5 23.8 49 0.0017 27.1 3.0 26 87-112 109-134 (183)
214 2gwg_A 4-oxalomesaconate hydra 23.8 2.3E+02 0.0077 25.7 7.9 69 256-325 96-180 (350)
215 2xbl_A Phosphoheptose isomeras 23.6 52 0.0018 27.3 3.1 24 88-111 130-153 (198)
216 1wa3_A 2-keto-3-deoxy-6-phosph 23.5 1.2E+02 0.0039 25.5 5.4 41 88-134 71-111 (205)
217 2ffi_A 2-pyrone-4,6-dicarboxyl 23.4 97 0.0033 27.1 5.1 69 254-326 70-146 (288)
218 2cyg_A Beta-1, 3-glucananse; e 23.4 2.2E+02 0.0076 26.3 7.7 48 85-137 10-57 (312)
219 1ydn_A Hydroxymethylglutaryl-C 23.3 93 0.0032 28.1 5.0 64 252-319 59-136 (295)
220 3u0h_A Xylose isomerase domain 23.3 39 0.0013 29.3 2.4 56 73-131 4-64 (281)
221 1m65_A Hypothetical protein YC 23.2 2.9E+02 0.0099 23.3 8.1 69 253-322 141-219 (245)
222 3p6l_A Sugar phosphate isomera 23.1 1.2E+02 0.0042 26.0 5.6 56 73-131 10-80 (262)
223 2da2_A Alpha-fetoprotein enhan 23.0 1.9E+02 0.0065 19.9 6.0 22 22-43 7-28 (70)
224 1wbh_A KHG/KDPG aldolase; lyas 23.0 1.6E+02 0.0054 25.5 6.3 67 255-326 8-74 (214)
225 2otd_A Glycerophosphodiester p 23.0 1.3E+02 0.0043 26.2 5.7 42 254-299 197-238 (247)
226 1f07_A Coenzyme F420-dependent 22.7 1.2E+02 0.0042 27.3 5.7 47 90-136 16-64 (321)
227 2ftp_A Hydroxymethylglutaryl-C 22.7 1E+02 0.0035 28.1 5.2 62 252-317 63-138 (302)
228 2dmt_A Homeobox protein BARH-l 22.6 1.2E+02 0.0042 21.7 4.7 23 21-43 16-38 (80)
229 3aal_A Probable endonuclease 4 22.6 2.2E+02 0.0076 25.0 7.4 52 77-129 8-68 (303)
230 1z69_A COG2141, coenzyme F420- 22.6 1.3E+02 0.0043 27.2 5.8 49 90-138 16-66 (327)
231 3ivs_A Homocitrate synthase, m 22.5 88 0.003 30.4 4.9 35 279-313 64-98 (423)
232 1ghs_A 1,3-beta-glucanase; hyd 22.5 1.1E+02 0.0037 28.4 5.3 48 85-137 10-57 (306)
233 1qop_A Tryptophan synthase alp 22.4 1.9E+02 0.0064 25.7 6.9 35 253-290 136-171 (268)
234 3vnd_A TSA, tryptophan synthas 22.3 75 0.0026 28.8 4.2 66 253-318 112-177 (267)
235 2zxd_A Alpha-L-fucosidase, put 22.1 1.8E+02 0.0061 28.4 7.1 52 84-137 101-173 (455)
236 1qop_A Tryptophan synthase alp 22.0 1.6E+02 0.0056 26.1 6.4 22 279-300 34-55 (268)
237 2c4w_A 3-dehydroquinate dehydr 22.0 85 0.0029 26.9 4.1 47 253-299 64-114 (176)
238 3l12_A Putative glycerophospho 21.9 1E+02 0.0036 28.0 5.1 41 254-298 258-298 (313)
239 1xrs_B D-lysine 5,6-aminomutas 21.7 1.5E+02 0.005 26.9 5.9 47 87-133 166-221 (262)
240 2r91_A 2-keto-3-deoxy-(6-phosp 21.5 3.1E+02 0.011 24.6 8.2 61 255-317 55-123 (286)
241 1luc_B Bacterial luciferase; m 21.4 1.4E+02 0.0047 27.2 5.9 47 91-137 25-78 (324)
242 1fvp_A Flavoprotein 390, FP390 21.4 52 0.0018 28.1 2.8 40 89-136 27-68 (231)
243 3b4u_A Dihydrodipicolinate syn 21.4 1.5E+02 0.0053 26.8 6.1 60 256-315 61-129 (294)
244 1ryp_F 20S proteasome; multica 21.3 69 0.0024 27.9 3.6 29 81-109 10-39 (233)
245 1vc4_A Indole-3-glycerol phosp 21.3 81 0.0028 28.2 4.1 61 256-319 97-157 (254)
246 1nfp_A LUXF gene product; flav 21.2 54 0.0018 28.1 2.8 38 91-136 29-68 (228)
247 2e1o_A Homeobox protein PRH; D 21.0 1.8E+02 0.0063 20.1 5.3 21 22-42 7-27 (70)
248 3mdu_A N-formimino-L-glutamate 21.0 1.9E+02 0.0064 27.3 6.9 62 73-134 51-156 (453)
249 2xij_A Methylmalonyl-COA mutas 20.8 1.4E+02 0.0048 31.3 6.3 47 87-133 641-692 (762)
250 1ryp_D 20S proteasome; multica 20.8 62 0.0021 28.3 3.2 30 81-110 7-37 (241)
251 1o1z_A GDPD, glycerophosphodie 20.7 87 0.003 27.3 4.2 34 263-296 10-47 (234)
252 3mz2_A Glycerophosphoryl diest 20.7 1.1E+02 0.0038 27.8 5.0 45 253-298 217-268 (292)
253 3h5d_A DHDPS, dihydrodipicolin 20.7 2.6E+02 0.009 25.5 7.6 62 256-317 65-135 (311)
254 1jeo_A MJ1247, hypothetical pr 20.7 56 0.0019 26.7 2.7 25 88-112 96-120 (180)
255 3mpg_A Dihydroorotase, dhoase; 20.6 1E+02 0.0035 28.8 4.9 38 73-110 54-93 (428)
256 3ks6_A Glycerophosphoryl diest 20.6 1.2E+02 0.0041 26.6 5.1 41 254-298 194-234 (250)
257 1sfl_A 3-dehydroquinate dehydr 20.5 4.3E+02 0.015 23.0 9.7 83 232-314 87-180 (238)
258 2djn_A Homeobox protein DLX-5; 20.5 2.2E+02 0.0075 19.7 5.6 21 22-42 7-27 (70)
259 2yxo_A Histidinol phosphatase; 20.4 2.3E+02 0.0079 24.3 6.9 63 253-317 137-217 (267)
260 1bw5_A ISL-1HD, insulin gene e 20.4 2.1E+02 0.0072 19.5 5.8 22 22-43 3-24 (66)
261 2i2w_A Phosphoheptose isomeras 20.4 51 0.0017 28.1 2.4 21 90-110 147-167 (212)
262 1vd6_A Glycerophosphoryl diest 20.4 1.3E+02 0.0044 25.8 5.2 41 254-298 176-216 (224)
263 1ezw_A Coenzyme F420-dependent 20.2 1.4E+02 0.0049 27.3 5.7 49 90-138 19-69 (349)
264 2dmq_A LIM/homeobox protein LH 20.2 1.9E+02 0.0065 20.5 5.3 21 22-42 7-27 (80)
265 1uas_A Alpha-galactosidase; TI 20.2 1.8E+02 0.0062 27.0 6.5 52 249-300 71-134 (362)
266 2lv7_A Calcium-binding protein 20.1 1.9E+02 0.0066 21.4 5.5 44 24-103 25-68 (100)
267 2d59_A Hypothetical protein PH 20.0 1.7E+02 0.0058 23.3 5.5 39 90-131 90-128 (144)
No 1
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=100.00 E-value=3.6e-54 Score=410.72 Aligned_cols=238 Identities=29% Similarity=0.451 Sum_probs=223.0
Q ss_pred CceEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCEEEEEEEEeeeecCCCCCCCCc
Q 019951 71 NNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEISTIFCQRGSESEEP 150 (333)
Q Consensus 71 ~~~~~DLH~HT~~SDG~~sp~eli~~A~~~Gl~~laITDHdt~~g~~~~~~~a~~~gi~~i~GiEis~~~~~~~~~~~~~ 150 (333)
+.+++||||||+||||.++|++++++|+++|++.|||||||++.|+.++.+++++.||++|+|+||++.+ .+..
T Consensus 11 m~~~~DLH~Hs~~SDG~~~~~elv~~A~~~Gl~~iaiTDH~~~~g~~~~~~~~~~~gi~~i~GvEis~~~------~~~~ 84 (301)
T 3o0f_A 11 PAQGWDIHCHTVFSDGTETPRTLVEQARKLGLHGVAIADHDTTAGWDEATEASEEIGLPLLLGTEITAVD------EDVS 84 (301)
T ss_dssp CSSSEEEEECCTTTTCSSCHHHHHHHHHHTTCSEEEECCBTCCTTHHHHHHHHHHHTCCEEEEEEEEEEE------TTEE
T ss_pred ccceEEeeECCCCCCCCCCHHHHHHHHHHcCCCEEEEcCCCccccHHHHHHHHHhcCCEEEEEEEEEEEe------CCce
Confidence 4589999999999999999999999999999999999999999999999999999999999999999998 5778
Q ss_pred EEEEEeeccCCCCccHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCC--CCCCHHHHHHHHHHcCccc
Q 019951 151 VHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKG--VAPGRLHVARAMVEAGHVE 228 (333)
Q Consensus 151 vHiL~y~~d~~~~~~~~L~~~l~~~~~~R~~r~~~~i~~L~~~g~~i~~e~l~~~~~~~--~~~~~~hia~~Lv~~g~~~ 228 (333)
+|||+|+++. ..+.|.+++..+++.|.+|+++|+++|++. ++++||++..+++++ ..++|+|||++|+++||+.
T Consensus 85 vHiL~~~~d~---~~~~l~~~l~~~~~~R~~R~~~i~~~L~~~-~~i~~e~v~~~a~~~~~~~igR~HiA~~Lv~~G~~~ 160 (301)
T 3o0f_A 85 VHMLAFQYDP---SNEHISSMFANTRAARLRRTKRMVERLSQD-FPITWDDVLAQVKEGERTTIGRPHIADALVAAGVYE 160 (301)
T ss_dssp EEEEEESCCT---TCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SSCCHHHHHTTCTTGGGSCCCHHHHHHHHHHTTSCS
T ss_pred EEEEEEcCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHhcCCCCCCcCHHHHHHHHHHcCCCC
Confidence 9999999863 367899999999999999999999999999 999999998876542 3689999999999999999
Q ss_pred hHHHHHHHhhcCCCCcccCCCCCCHHHHHHHHHHhCCEEEEeCCCCCC-----CcHHHHHHHHHcCCCEEEEeCCCCCHH
Q 019951 229 NLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALK-----NPAAIIRKLKDVGLHGLEVYRSDGKLV 303 (333)
Q Consensus 229 ~~~~~f~~yl~~~~~~yv~~~~~~~eevI~~I~~aGGvaVLAHP~~~~-----~~~~li~~l~~~GlDGIEv~~~~~~~~ 303 (333)
+..++|++||++++|+||+..+++++++|++|+++||++|||||+++. ...+++.+|+++|+|||||+|+.|+++
T Consensus 161 ~~~~aF~~~l~~g~~~yV~~~~~~~~eaI~~I~~aGGvaVLAHP~r~~~~r~~~~~~~l~~l~~~GldgIEv~~~~~~~~ 240 (301)
T 3o0f_A 161 TRSDAFADAVSAKSKYYIPTPSPSTHEVIAAVKGAGGVVVAAHAGDPQRNRRLLSDEQLDAMIADGLDGLEVWHRGNPPE 240 (301)
T ss_dssp SHHHHHTTTTSTTSTTCCCCCCCBHHHHHHHHHHTTCEEEECSTTCTTTCSSCCCHHHHHHHHHHTCCEEEEESTTSCHH
T ss_pred CHHHHHHHHHcCCCccccCccCCCHHHHHHHHHHCCCEEEecChhhhccccccCcHHHHHHHHHCCCCEEEEeCCCCCHH
Confidence 999999999999999999999999999999999999999999997753 347899999999999999999999999
Q ss_pred HHHHHHHHHhhcCCC
Q 019951 304 GVIFTLQDGSLFSLL 318 (333)
Q Consensus 304 ~~~~~~~~a~~~~l~ 318 (333)
+...+.++|+++||.
T Consensus 241 ~~~~~~~lA~~~gL~ 255 (301)
T 3o0f_A 241 QRERLLTIAARHDLL 255 (301)
T ss_dssp HHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHcCCc
Confidence 999999999999984
No 2
>2yb1_A Amidohydrolase; HET: AMP; 1.90A {Chromobacterium violaceum} PDB: 2yb4_A
Probab=100.00 E-value=1.2e-45 Score=350.14 Aligned_cols=236 Identities=31% Similarity=0.437 Sum_probs=217.7
Q ss_pred eEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCEEEEEEEEeeeecCCCCCCCCcEE
Q 019951 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEISTIFCQRGSESEEPVH 152 (333)
Q Consensus 73 ~~~DLH~HT~~SDG~~sp~eli~~A~~~Gl~~laITDHdt~~g~~~~~~~a~~~gi~~i~GiEis~~~~~~~~~~~~~vH 152 (333)
+++||||||.+|||..+|++++++|+++|++.||||||+++.|+.++.+.+++.+|++|+|+|+++.+ .+..+|
T Consensus 2 ~~~DLH~Ht~~SDg~~~~~elv~~A~~~Gl~~iaiTDH~~~~g~~~~~~~~~~~gi~vi~G~Ei~~~~------~~~~~h 75 (292)
T 2yb1_A 2 ANIDLHFHSRTSDGALTPTEVIDRAAARAPALLALTDHDCTGGLAEAAAAAARRGIPFLNGVEVSVSW------GRHTVH 75 (292)
T ss_dssp CCEECCBCCTTTTCSSCHHHHHHHHHTTCCSEEEECCBTCCTTHHHHHHHHHHTTCCEEEEEEEEEEE------TTEEEE
T ss_pred CccccccCCCccCCCCCHHHHHHHHHHCCCCEEEEecCCccccHHHHHHHHHHcCCEEEEEEEEEEec------CCceeE
Confidence 57899999999999999999999999999999999999999999999998888999999999999987 456789
Q ss_pred EEEeeccCCCCccHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCCHHHHHHHHHHcCccchHHH
Q 019951 153 ILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGRLHVARAMVEAGHVENLKQ 232 (333)
Q Consensus 153 iL~y~~d~~~~~~~~L~~~l~~~~~~R~~r~~~~i~~L~~~g~~i~~e~l~~~~~~~~~~~~~hia~~Lv~~g~~~~~~~ 232 (333)
+|+|+.+. ..+.+.+++..+++.|.+|+.+|+++|++.|++++++++..+++++..++++||+++|++.|++.+..+
T Consensus 76 il~~~~d~---~~~~l~~~~~~~~~~r~~r~~~~~~~l~~~g~~~~~~~v~~~a~~~~~igr~H~a~~lv~~g~~~~~~~ 152 (292)
T 2yb1_A 76 IVGLGIDP---AEPALAAGLKSIREGRLERARQMGASLEAAGIAGCFDGAMRWCDNPEMISRTHFARHLVDSGAVKDMRT 152 (292)
T ss_dssp EEEESCCT---TCHHHHHHHHHHHTTHHHHHHHHHHHHHHTTCTTHHHHHHTTCSSGGGCCHHHHHHHHHHTTSSSSHHH
T ss_pred EEEEecCc---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCHHHHHHhccCCCCcCHHHHHHHHHHcCCcCCHHH
Confidence 99999763 245688888899999999999999999999999999999887655456899999999999999999999
Q ss_pred HHHHhhcCCCCcccCCCCCCHHHHHHHHHHhCCEEEEeCCCCCCCc----HHHHHHHHHcCCCEEEEeCCCCCHHHHHHH
Q 019951 233 AFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKNP----AAIIRKLKDVGLHGLEVYRSDGKLVGVIFT 308 (333)
Q Consensus 233 ~f~~yl~~~~~~yv~~~~~~~eevI~~I~~aGGvaVLAHP~~~~~~----~~li~~l~~~GlDGIEv~~~~~~~~~~~~~ 308 (333)
+|++||+.++|+|++..+++++++|++|+++||++|||||+++... .++++++++.|++||||+++.++......+
T Consensus 153 ~f~~yl~~~~~~~v~~~~~~~~~~i~~i~~~Gg~~VlAHP~r~~~~~~~~~~~l~~l~~~g~~giEv~~~~~~~~~~~~~ 232 (292)
T 2yb1_A 153 VFRKYLTPGKPGYVSHQWASLEDAVGWIVGAGGMAVIAHPGRYDMGRTLIERLILDFQAAGGQGIEVASGSHSLDDMHKF 232 (292)
T ss_dssp HHHHSSSTTSTTCCCCCCBCHHHHHHHHHHTTCEEEECCGGGSSCCHHHHHHHHHHHHHTTCCEEEEEETTCCHHHHHHH
T ss_pred HHHHHHccCCceeccCCCCCHHHHHHHHHHcCCEEEEECcCccccchhhHHHHHHHHHhCCCCEEEEeCCCCCHHHHHHH
Confidence 9999999999999999999999999999999999999999987643 467888899999999999999998889999
Q ss_pred HHHHhhcCC
Q 019951 309 LQDGSLFSL 317 (333)
Q Consensus 309 ~~~a~~~~l 317 (333)
.++|+++||
T Consensus 233 ~~~a~~~gl 241 (292)
T 2yb1_A 233 ALHADRHGL 241 (292)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHcCC
Confidence 999999997
No 3
>3e38_A Two-domain protein containing predicted PHP-like dependent phosphoesterase; structural genomics; 2.20A {Bacteroides vulgatus atcc 8482}
Probab=99.90 E-value=6.2e-24 Score=205.68 Aligned_cols=153 Identities=24% Similarity=0.265 Sum_probs=122.7
Q ss_pred CCceEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecC------------CCCCCHHHHHHHHHhCCCEEEEEEEEe
Q 019951 70 DNNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDH------------DTMSGIPEAIETARRFGMKIIPGVEIS 137 (333)
Q Consensus 70 ~~~~~~DLH~HT~~SDG~~sp~eli~~A~~~Gl~~laITDH------------dt~~g~~~~~~~a~~~gi~~i~GiEis 137 (333)
..|+++|||+||.||||..+|++++++|++.|++.|||||| |++.|+.++.+++++.++++|+|+||+
T Consensus 16 ~~~~~~DlH~Ht~~SDg~~~~~elv~~A~~~Gl~~iaiTDH~~~~~~~~~~~~d~~~g~~~~~~~a~~~gi~vi~G~Ei~ 95 (343)
T 3e38_A 16 YTTLKCDFHMHSVFSDGLVWPTVRVDEAYRDGLDAISLTEHIEYRPHKQDVVSDHNRSFDLCREQAEKLGILLIKGSEIT 95 (343)
T ss_dssp CEEEEEECCBCCTTTTCSBCHHHHHHHHHHTTCSEECCEEESSCCTTTTTBCCCTTHHHHHHHHHHHHHTCEECCEEEEE
T ss_pred CCEEEEECCCCCCCCCCCCCHHHHHHHHHHcCCCEEEECCCCcccccccccchhHHHHHHHHHHHHHhCCCEEEEEEEEE
Confidence 35899999999999999999999999999999999999999 566788999888888999999999999
Q ss_pred eeecCCCCCCCCcEEEEEeeccCCCCccHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCCHHHH
Q 019951 138 TIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGRLHV 217 (333)
Q Consensus 138 ~~~~~~~~~~~~~vHiL~y~~d~~~~~~~~L~~~l~~~~~~R~~r~~~~i~~L~~~g~~i~~e~l~~~~~~~~~~~~~hi 217 (333)
+.+ ..+|+|+|+.+. +
T Consensus 96 ~~~--------~~gHiL~l~~~~----~---------------------------------------------------- 111 (343)
T 3e38_A 96 RAM--------APGHFNAIFLSD----S---------------------------------------------------- 111 (343)
T ss_dssp CST--------TTCEEEEESCSC----S----------------------------------------------------
T ss_pred EcC--------CCcEEEEEeCCC----C----------------------------------------------------
Confidence 853 358999998531 0
Q ss_pred HHHHHHcCccchHHHHHHHhhcCCCCcccCCCCCCHHHHHHHHHHhCCEEEEeCCCCCCCc------HHHHHHHH-HcCC
Q 019951 218 ARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKNP------AAIIRKLK-DVGL 290 (333)
Q Consensus 218 a~~Lv~~g~~~~~~~~f~~yl~~~~~~yv~~~~~~~eevI~~I~~aGGvaVLAHP~~~~~~------~~li~~l~-~~Gl 290 (333)
.+....+++++++.|++.||++|+|||.++... ...++++. ..++
T Consensus 112 ----------------------------~~~~~~~~~eli~~v~~~Ggl~iiAHP~r~~~~~~g~~~~~~~~e~l~~~~i 163 (343)
T 3e38_A 112 ----------------------------NPLEQKDYKDAFREAKKQGAFMFWNHPGWDSQQPDTTKWWPEHTALYQEGCM 163 (343)
T ss_dssp ----------------------------GGGCCSSHHHHHHHHHHTTCEEEECCTTCTTTSSSCCCCCHHHHHHHHTTCC
T ss_pred ----------------------------CCCcccCHHHHHHHHHHCCCEEEEeCCCCcccCccccccccchHHHhcccCc
Confidence 000125689999999999999999999985310 01144443 4789
Q ss_pred CEEEEeCCCCCHHHHHHHHHHHhhcCC
Q 019951 291 HGLEVYRSDGKLVGVIFTLQDGSLFSL 317 (333)
Q Consensus 291 DGIEv~~~~~~~~~~~~~~~~a~~~~l 317 (333)
||||||++... ..++.++|+.++|
T Consensus 164 DaIEv~N~~~~---n~~A~~la~~~~l 187 (343)
T 3e38_A 164 HGIEVANGHLY---MPEAIQWCLDKNL 187 (343)
T ss_dssp SEEEEEETTEE---CTHHHHHHHHHTC
T ss_pred cEEEEcCCCCc---cHHHHHHHhhCCC
Confidence 99999998741 3456688888887
No 4
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=99.81 E-value=1.4e-19 Score=164.81 Aligned_cols=165 Identities=19% Similarity=0.229 Sum_probs=109.6
Q ss_pred eEEceeeeCcCCC-CCCCHHHHHHHHHHcCCcEEEEecCCC-CCCHHH--HH---HHH--HhCCCEEEEEEEEeeeecCC
Q 019951 73 VVFELHSHSNFSD-GYLSPSKLVERAHCNGVKVLALTDHDT-MSGIPE--AI---ETA--RRFGMKIIPGVEISTIFCQR 143 (333)
Q Consensus 73 ~~~DLH~HT~~SD-G~~sp~eli~~A~~~Gl~~laITDHdt-~~g~~~--~~---~~a--~~~gi~~i~GiEis~~~~~~ 143 (333)
+++||||||.+|| |..+|++++++|++.|++.||||||++ +.+... .. +.+ +..+|++++|+|+++..
T Consensus 2 ~~~DlH~Ht~~Sd~g~~~~~e~v~~A~~~Gl~~iaiTDH~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~G~Ei~~~~--- 78 (245)
T 1m65_A 2 YPVDLHMHTVASTHAYSTLSDYIAQAKQKGIKLFAITDHGPDMEDAPHHWHFINMRIWPRVVDGVGILRGIEANIKN--- 78 (245)
T ss_dssp CCEECCBCCTTSTTCCCCHHHHHHHHHHHTCCEEEEEEECTTSTTCCCTHHHHGGGGSCSEETTEEEEEEEEEEBCS---
T ss_pred CceEeCcCCCCCCCCCCcHHHHHHHHHHCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHhcCCCeEEEEEEeeeeC---
Confidence 6789999999995 677999999999999999999999999 665421 11 112 23589999999999853
Q ss_pred CCCCCCcEEEEEeeccCCCCccHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCCHHHHHHHHHH
Q 019951 144 GSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGRLHVARAMVE 223 (333)
Q Consensus 144 ~~~~~~~vHiL~y~~d~~~~~~~~L~~~l~~~~~~R~~r~~~~i~~L~~~g~~i~~e~l~~~~~~~~~~~~~hia~~Lv~ 223 (333)
... + .+. ...+ ++. ..+. ++..
T Consensus 79 ---~~~--~-----~~~----~~~~------------------~~~---ld~v---------------i~~~-------- 100 (245)
T 1m65_A 79 ---VDG--E-----IDC----SGKM------------------FDS---LDLI---------------IAGF-------- 100 (245)
T ss_dssp ---TTC--C-----BSC----CHHH------------------HHH---CSEE---------------EEEC--------
T ss_pred ---CCC--c-----hhH----HHHH------------------Hhh---CCEE---------------EEee--------
Confidence 111 1 110 1111 111 0000 0000
Q ss_pred cCccchHHHHHHHhhcCCCCcccCCC-CCCHHHHHHHHHHhCCEEEEeCCCCCCC---cHHHHHHHHHcCCCEEEEeCCC
Q 019951 224 AGHVENLKQAFARYLYDGGPAYSTGS-EPLAEVAVQLIHRTGGLAVLAHPWALKN---PAAIIRKLKDVGLHGLEVYRSD 299 (333)
Q Consensus 224 ~g~~~~~~~~f~~yl~~~~~~yv~~~-~~~~eevI~~I~~aGGvaVLAHP~~~~~---~~~li~~l~~~GlDGIEv~~~~ 299 (333)
..++|.+.. ....++++++|+ +||++|+|||.++.. ..++++.+++.| ++||++++.
T Consensus 101 -----------------h~~~~~~~~~~~~~~~~~~~i~-~g~~~vlaHp~~~~~~~~~~~~~~~~~~~g-~~iEvn~~~ 161 (245)
T 1m65_A 101 -----------------HEPVFAPHDKATNTQAMIATIA-SGNVHIISHPGNPKYEIDVKAVAEAAAKHQ-VALEINNSS 161 (245)
T ss_dssp -----------------CTTTSCCCCHHHHHHHHHHHHH-TSCCSEECCTTCTTSCCCHHHHHHHHHHHT-CEEEEETTC
T ss_pred -----------------cCCccCcchHHHHHHHHHHHHh-CCCCCEEECCCCccchhHHHHHHHHHHHcC-CEEEEECCC
Confidence 001122211 134578899888 999999999998542 256789999999 799999987
Q ss_pred CC------HHHHHHHHHHHhhcCC
Q 019951 300 GK------LVGVIFTLQDGSLFSL 317 (333)
Q Consensus 300 ~~------~~~~~~~~~~a~~~~l 317 (333)
.. ......+.++|+++|+
T Consensus 162 ~~~~~~g~~~~~~~~~~~~~~~g~ 185 (245)
T 1m65_A 162 FLHSRKGSEDNCREVAAAVRDAGG 185 (245)
T ss_dssp ----------CHHHHHHHHHHHTC
T ss_pred CcccCCCCCCchHHHHHHHHHcCC
Confidence 63 3455888999999997
No 5
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=99.79 E-value=1.5e-19 Score=166.50 Aligned_cols=67 Identities=21% Similarity=0.282 Sum_probs=56.8
Q ss_pred EEceeeeCcCC-CCCCCHHHHHHHHHHcCCcEEEEecCCCCC-------C---------HHHHHHHHHhC-CCEEEEEEE
Q 019951 74 VFELHSHSNFS-DGYLSPSKLVERAHCNGVKVLALTDHDTMS-------G---------IPEAIETARRF-GMKIIPGVE 135 (333)
Q Consensus 74 ~~DLH~HT~~S-DG~~sp~eli~~A~~~Gl~~laITDHdt~~-------g---------~~~~~~~a~~~-gi~~i~GiE 135 (333)
.+||||||.+| ||..+|++++++|++.|++.||||||+++. + +.++.+..++. +|++++|+|
T Consensus 1 ~~DlH~Ht~~S~DG~~~~ee~v~~A~~~Gl~~iaiTDH~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~i~i~~G~E 80 (267)
T 2yxo_A 1 MVDSHVHTPLCGHAEGHPEAYLEEARAKGLKGVVFTDHSPMPPWYDPESRMRLEALPFYLLALERVRERAQDLYVGIGLE 80 (267)
T ss_dssp CEEEEECCGGGSSCCSCHHHHHHHHHHTTCSEEEEEEECCCCTTSSGGGSCCGGGHHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred CCccCcCcCCCCCCCCCHHHHHHHHHHcCCCEEEEcCCCCCCcccCccccccHHHHHHHHHHHHHHHHHhcCCcEEEEEE
Confidence 37999999999 999999999999999999999999999987 3 33334444444 999999999
Q ss_pred Eeeee
Q 019951 136 ISTIF 140 (333)
Q Consensus 136 is~~~ 140 (333)
+++..
T Consensus 81 i~~~~ 85 (267)
T 2yxo_A 81 ADFHP 85 (267)
T ss_dssp EECCT
T ss_pred eccCC
Confidence 99753
No 6
>2anu_A Hypothetical protein TM0559; predicted metal-dependent phosphoesterase (PHP famil structural genomics, joint center for structural genomics; 2.40A {Thermotoga maritima} SCOP: c.6.3.1
Probab=99.77 E-value=1.6e-18 Score=160.22 Aligned_cols=147 Identities=24% Similarity=0.369 Sum_probs=105.5
Q ss_pred CCceEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCC----CCCC---------------HHH--------HHHH
Q 019951 70 DNNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHD----TMSG---------------IPE--------AIET 122 (333)
Q Consensus 70 ~~~~~~DLH~HT~~SDG~~sp~eli~~A~~~Gl~~laITDHd----t~~g---------------~~~--------~~~~ 122 (333)
..|+++|||+||.+|||..+|++++++|+++|++.||||||+ ++.| +.+ +.+.
T Consensus 17 ~~~~~~DlH~Ht~~SDg~~t~ee~v~~A~~~Gl~~i~iTDH~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 96 (255)
T 2anu_A 17 TEWLLCDFHVHTNMSDGHLPLGEVVDLFGKHGVDVVSITDHIVDRRTLEQRKRNGEPLGAITEDKFQDYLKRLWREQKRA 96 (255)
T ss_dssp CEEEEEEEEECCTTTTCSSCHHHHHHHHHHTTCSEEEEEEEEECHHHHHHHHHTTCCCCSCCSTTHHHHHHHHHHHHHHH
T ss_pred CceEEEEEeecCCCcCCCCCHHHHHHHHHHCCCCEEEEcCCCCcccccccccccccccccccHHHHHHHHHHHHHHHHhh
Confidence 567999999999999999999999999999999999999997 2322 111 1222
Q ss_pred HHhCCCEEEEEEEEeeeecCCCCCCCCcEEEEEeeccCCCCccHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCCCHHHH
Q 019951 123 ARRFGMKIIPGVEISTIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHV 202 (333)
Q Consensus 123 a~~~gi~~i~GiEis~~~~~~~~~~~~~vHiL~y~~d~~~~~~~~L~~~l~~~~~~R~~r~~~~i~~L~~~g~~i~~e~l 202 (333)
++..+|++++|+|+++. +..+|+|+++.+. +
T Consensus 97 ~~~~~i~v~~G~Ei~~~--------~~~~h~l~~~~~~----~------------------------------------- 127 (255)
T 2anu_A 97 WEEYGMILIPGVEITNN--------TDLYHIVAVDVKE----Y------------------------------------- 127 (255)
T ss_dssp HHHHSCEEEEEEEEEET--------TTTEEEEEESCCS----C-------------------------------------
T ss_pred ccccCcEEEEEEEEeeC--------CCCeeEEEecccc----c-------------------------------------
Confidence 34569999999999974 2568999986420 0
Q ss_pred HHHhCCCCCCCHHHHHHHHHHcCccchHHHHHHHhhcCCCCcccCCCCCCHHHHHHHHHHhCCEEEEeCCCCCCCcH---
Q 019951 203 AKIAGKGVAPGRLHVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKNPA--- 279 (333)
Q Consensus 203 ~~~~~~~~~~~~~hia~~Lv~~g~~~~~~~~f~~yl~~~~~~yv~~~~~~~eevI~~I~~aGGvaVLAHP~~~~~~~--- 279 (333)
+ + .....+++++.|++.|+++|+|||+++....
T Consensus 128 -----------------------------------~--------~-~~~~~~~~l~~i~~~g~~~ilaHp~~~~~~~~~~ 163 (255)
T 2anu_A 128 -----------------------------------V--------D-PSLPVEEIVEKLKEQNALVIAAHPDRKKQDEEHL 163 (255)
T ss_dssp -----------------------------------C--------C-TTSCHHHHHHHHHHTTCEEEECCCCTTC-----C
T ss_pred -----------------------------------c--------C-CCCCHHHHHHHHHHCCCeEEEeCCCccccccccc
Confidence 0 0 0135789999999999999999999865321
Q ss_pred --HHH---HHHHHcCCCEEEEeCCCCCHHHHHHHHHHHhhcCC
Q 019951 280 --AII---RKLKDVGLHGLEVYRSDGKLVGVIFTLQDGSLFSL 317 (333)
Q Consensus 280 --~li---~~l~~~GlDGIEv~~~~~~~~~~~~~~~~a~~~~l 317 (333)
... +.+ ...+++||++++..- .++++++++
T Consensus 164 ~~~~~~~~~~~-~~~~~aiEin~~~~~-------~~~~~~~g~ 198 (255)
T 2anu_A 164 SWYLWANMERF-KDTFDAWEIANRDDL-------FNSVGVKKY 198 (255)
T ss_dssp CCHHHHSTTTT-TTTCSEEEEEETTEE-------CHHHHHTTC
T ss_pred cccccchhhhh-hccCcEEEEcCCCch-------hhHHHHcCC
Confidence 011 122 236899999986521 125667775
No 7
>2hnh_A DNA polymerase III alpha subunit; DNA replication, nucleotidyltransferase, beta, PHP, transferase; HET: DNA; 2.30A {Escherichia coli} PDB: 2hqa_A*
Probab=99.64 E-value=4.2e-16 Score=167.14 Aligned_cols=97 Identities=24% Similarity=0.395 Sum_probs=82.8
Q ss_pred eEEceeeeCcCC--CCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCEEEEEEEEeeeecCCCCCCCCc
Q 019951 73 VVFELHSHSNFS--DGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEISTIFCQRGSESEEP 150 (333)
Q Consensus 73 ~~~DLH~HT~~S--DG~~sp~eli~~A~~~Gl~~laITDHdt~~g~~~~~~~a~~~gi~~i~GiEis~~~~~~~~~~~~~ 150 (333)
.++||||||.|| ||..+|++|+++|+++|++++|||||+++.|+.++++++++.||++|+|+|+++.++.. ....
T Consensus 5 ~~vdLH~HT~~S~lDG~~~~~elv~~A~~~Gl~alAITDH~~~~G~~~~~~~~~~~gIk~I~G~Ei~~~~~~~---~~~~ 81 (910)
T 2hnh_A 5 RFVHLRVHSDYSMIDGLAKTAPLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGAGIKPIVGADFNVQCDLL---GDEL 81 (910)
T ss_dssp CCCCCCBCCGGGSSSCCSCHHHHHHHHHHTTCSEEEECCBTCCTTHHHHHHHHHHHTCEEEEEEEEEEECTTT---TTCC
T ss_pred ceeeecccccCchhcccCCHHHHHHHHHHCCCCEEEEEeCCcchhHHHHHHHHHHCCCeEEEEEEEEEecCCC---Cccc
Confidence 479999999999 99999999999999999999999999999999999999999999999999999976210 0135
Q ss_pred EEEEEeeccCCCCccHHHHHHHHH
Q 019951 151 VHILAYYSSCGPSKYEELENFLAN 174 (333)
Q Consensus 151 vHiL~y~~d~~~~~~~~L~~~l~~ 174 (333)
+|+++|+.+ ..+|.+|+++++.
T Consensus 82 ~hlv~la~n--~~g~~nL~~l~s~ 103 (910)
T 2hnh_A 82 THLTVLAAN--NTGYQNLTLLISK 103 (910)
T ss_dssp EEEEEEECS--HHHHHHHHHHHHH
T ss_pred ceEEEEEcC--HHHHHHHHHHHHH
Confidence 899999875 3466666666554
No 8
>2hpi_A DNA polymerase III alpha subunit; POL-beta-like nucleotidyltransferase fold, transferase; HET: DNA; 3.00A {Thermus aquaticus} PDB: 2hpm_A* 3e0d_A*
Probab=99.60 E-value=4.3e-15 Score=162.34 Aligned_cols=100 Identities=25% Similarity=0.308 Sum_probs=83.4
Q ss_pred eEEceeeeCcCC--CCCCCHHHHHHHHHH--cCCcEEEEecCCCCCCHHHHHHHHHhCCCEEEEEEEEeeeecCC-CCCC
Q 019951 73 VVFELHSHSNFS--DGYLSPSKLVERAHC--NGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEISTIFCQR-GSES 147 (333)
Q Consensus 73 ~~~DLH~HT~~S--DG~~sp~eli~~A~~--~Gl~~laITDHdt~~g~~~~~~~a~~~gi~~i~GiEis~~~~~~-~~~~ 147 (333)
.++|||+||.|| ||..+|++|+++|++ .|++++|||||+++.|+.++++.|++.||++|+|+|+++..+.. +...
T Consensus 6 ~fvdLH~HT~~SlLDG~~~~~elv~~A~~~~~G~~alAITDH~~~~G~~~f~~~a~~~gIk~I~G~E~~~~~~~~~d~~~ 85 (1220)
T 2hpi_A 6 KFAHLHQHTQFSLLDGAAKLQDLLKWVKETTPEDPALAMTDHGNLFGAVEFYKKATAMGVKPIIGYEAYVAAESRFDRKR 85 (1220)
T ss_dssp CCCCCSBCCTTSTTTCCCCHHHHHHHHHHHCCSSCEEEEEEETCCTTHHHHHHHHHTTTCEEEEEEEEEEESSCTTCCCC
T ss_pred cEeEcccccCCCcccccCCHHHHHHHHHhccCCCCEEEEEecCcchhHHHHHHHHHHcCCeEEEEEEEEEeccccccccc
Confidence 578999999999 999999999999999 99999999999999999999999999999999999999875321 1000
Q ss_pred ----CC-cEEEEEeeccCCCCccHHHHHHHHH
Q 019951 148 ----EE-PVHILAYYSSCGPSKYEELENFLAN 174 (333)
Q Consensus 148 ----~~-~vHiL~y~~d~~~~~~~~L~~~l~~ 174 (333)
.. ..|++.+..+ ..+|.+|+++++.
T Consensus 86 ~~~~d~~~~hLvlLAkN--~~GY~NL~kLiS~ 115 (1220)
T 2hpi_A 86 GKGLDGGYFHLTLLAKD--FTGYQNLVRLASR 115 (1220)
T ss_dssp C-----CEEEEEEEECS--HHHHHHHHHHHHH
T ss_pred cccccCccceEEEEEcC--HHHHHHHHHHHHH
Confidence 11 3799999864 3578888877654
No 9
>3f2b_A DNA-directed DNA polymerase III alpha chain; DNA polymerase C, DNA polymerase III; HET: DGT; 2.39A {Geobacillus kaustophilus} PDB: 3f2c_A* 3f2d_A*
Probab=99.59 E-value=1.6e-15 Score=163.52 Aligned_cols=104 Identities=28% Similarity=0.393 Sum_probs=86.9
Q ss_pred CceEEceeeeCcCC--CCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCEEEEEEEEeeeecCCC----
Q 019951 71 NNVVFELHSHSNFS--DGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEISTIFCQRG---- 144 (333)
Q Consensus 71 ~~~~~DLH~HT~~S--DG~~sp~eli~~A~~~Gl~~laITDHdt~~g~~~~~~~a~~~gi~~i~GiEis~~~~~~~---- 144 (333)
.+.++||||||.|| ||..+|++|+++|+++|+++||||||+++.|+.+++++|++.||++|+|+|+++.++...
T Consensus 113 ~~~~vdLH~HT~~S~lDG~~~~~eLv~~A~~~G~~aiAITDH~~~~G~~~~~~~a~~~gIk~I~G~E~~~~~~~~~~~~~ 192 (1041)
T 3f2b_A 113 GEKRVELHLHTPMSQMDAVTSVTKLIEQAKKWGHPAIAVTDHAVVQSFPEAYSAAKKHGMKVIYGLEANIVDDGVPIAYN 192 (1041)
T ss_dssp TSCCCBCCBCCTTSTTTCCSCHHHHHHHHHHTTCSCEEECCBSCCTTHHHHHHHHHHHTCCEEEEEEEEEECC-------
T ss_pred CcceEEcccCCcCccccccCCHHHHHHHHHHCCCCEEEEecccchhhHHHHHHHHHHCCCEEEEEEEEEEEeCCcccccc
Confidence 46899999999999 999999999999999999999999999999999999999999999999999998753210
Q ss_pred C------CCCCcEEEEEeeccCCCCccHHHHHHHHHHH
Q 019951 145 S------ESEEPVHILAYYSSCGPSKYEELENFLANIR 176 (333)
Q Consensus 145 ~------~~~~~vHiL~y~~d~~~~~~~~L~~~l~~~~ 176 (333)
. ......|++.+..+ ..+|.+|+++++...
T Consensus 193 ~~~~~~~~~~~~~hlvlLAkN--~~Gy~nL~kLvS~a~ 228 (1041)
T 3f2b_A 193 ETHRRLGSGSGPFHVTLLAQN--ETGLKNLFKLVSLSH 228 (1041)
T ss_dssp -----------CEEEEEEECS--HHHHHHHHHHHHHHH
T ss_pred cccccccccCCCceEEEEeCC--HHHHHHHHHHHHHHH
Confidence 0 01234799999865 468999999887643
No 10
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=99.53 E-value=1.5e-14 Score=134.90 Aligned_cols=162 Identities=17% Similarity=0.162 Sum_probs=106.1
Q ss_pred EceeeeCcC--CCCCCCHHH---HHHHHHHcCCcEEEEecCCCCCC-----------HHHHHHHHHh--CCCEEEEEEEE
Q 019951 75 FELHSHSNF--SDGYLSPSK---LVERAHCNGVKVLALTDHDTMSG-----------IPEAIETARR--FGMKIIPGVEI 136 (333)
Q Consensus 75 ~DLH~HT~~--SDG~~sp~e---li~~A~~~Gl~~laITDHdt~~g-----------~~~~~~~a~~--~gi~~i~GiEi 136 (333)
+|+||||.+ |||..|+++ ++++|.+.|++.|++|||..... +.++.+..++ .+|++++|+|+
T Consensus 2 ~D~H~H~~~~~ddG~~~~~~sl~~~~~a~~~G~~~i~~T~H~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~i~I~~G~Ev 81 (262)
T 3qy7_A 2 IDIHCHILPAMDDGAGDSADSIEMARAAVRQGIRTIIATPHHNNGVYKNEPAAVREAADQLNKRLIKEDIPLHVLPGQEI 81 (262)
T ss_dssp EESSBCCSTTSSSSCSSHHHHHHHHHHHHHTTCCEEECCCBSEETTEECCHHHHHHHHHHHHHHHHHTTCCCEEECCCEE
T ss_pred EEEeecCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEEecCeEE
Confidence 799999998 599999997 99999999999999999975321 1223333333 47899999999
Q ss_pred eeeecCCCCCCCCcEEEEEeeccCCCCccHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCCHHH
Q 019951 137 STIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGRLH 216 (333)
Q Consensus 137 s~~~~~~~~~~~~~vHiL~y~~d~~~~~~~~L~~~l~~~~~~R~~r~~~~i~~L~~~g~~i~~e~l~~~~~~~~~~~~~h 216 (333)
..... . . +.+.+..+. .++.
T Consensus 82 ~~~~~-----------------------~---~------------------~~l~~~~~~--------------~l~~-- 101 (262)
T 3qy7_A 82 RIYGE-----------------------V---E------------------QDLAKRQLL--------------SLND-- 101 (262)
T ss_dssp ECCTT-----------------------H---H------------------HHHHTTCSC--------------CGGG--
T ss_pred ecchh-----------------------H---H------------------HHHhcCCCc--------------EECC--
Confidence 86420 0 0 000000000 0000
Q ss_pred HHHHHHHcCccchHHHHHHHhhcCCCCcccCCCCCCHHHHHHHHHHhCCEEEEeCCCCCCC---cHHHHHHHHHcCCCEE
Q 019951 217 VARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKN---PAAIIRKLKDVGLHGL 293 (333)
Q Consensus 217 ia~~Lv~~g~~~~~~~~f~~yl~~~~~~yv~~~~~~~eevI~~I~~aGGvaVLAHP~~~~~---~~~li~~l~~~GlDGI 293 (333)
.+|+--.-+. ........++|..|.++|+++|||||.||.. ..+++.++++.|. ++
T Consensus 102 ------------------~~~vl~e~~~--~~~~~~~~~~l~~i~~~g~v~ILAHPeRy~~~~~~~~~l~~l~~~G~-~i 160 (262)
T 3qy7_A 102 ------------------TKYILIEFPF--DHVPRYAEQLFYDLQLKGYIPVIAHPERNREIRENPSLLYHLVEKGA-AS 160 (262)
T ss_dssp ------------------SSEEEEECCT--TCCCTTHHHHHHHHHHTTCEEEEECGGGCHHHHHCTHHHHHHHHTTC-EE
T ss_pred ------------------ceEEEEeCCC--ccCHHHHHHHHHHHHHCCCcEEEECCCccccccccHHHHHHHHHCCC-EE
Confidence 0010000000 0112457899999999999999999998752 2367899999996 79
Q ss_pred EEeCCCCCH---HHHHHHHHHHhhcCC
Q 019951 294 EVYRSDGKL---VGVIFTLQDGSLFSL 317 (333)
Q Consensus 294 Ev~~~~~~~---~~~~~~~~~a~~~~l 317 (333)
|+..+.... ......++.+.++|+
T Consensus 161 EiN~~s~~g~~g~~~~~~~~~~~~~gl 187 (262)
T 3qy7_A 161 QITSGSLAGIFGKQLKAFSLRLVEANL 187 (262)
T ss_dssp EEEHHHHHTTTCHHHHHHHHHHHHTTC
T ss_pred EEECCccCcccchHHHHHHHHHHhCCC
Confidence 999754321 345677788888887
No 11
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=99.53 E-value=1.8e-14 Score=132.43 Aligned_cols=163 Identities=23% Similarity=0.160 Sum_probs=106.1
Q ss_pred EEceeeeCcCC--CCCCCHH---HHHHHHHHcCCcEEEEecCCCCCC----HH---H----HHHHHHh--CCCEEEEEEE
Q 019951 74 VFELHSHSNFS--DGYLSPS---KLVERAHCNGVKVLALTDHDTMSG----IP---E----AIETARR--FGMKIIPGVE 135 (333)
Q Consensus 74 ~~DLH~HT~~S--DG~~sp~---eli~~A~~~Gl~~laITDHdt~~g----~~---~----~~~~a~~--~gi~~i~GiE 135 (333)
.+|+||||.+| ||..+++ +++++|.+.|++.|++|||..... +. + +.+..++ .+|++++|+|
T Consensus 5 m~D~H~Ht~~~~ddg~~~~e~~~e~i~~A~~~Gi~~i~~TdH~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~i~~G~E 84 (247)
T 2wje_A 5 MIDIHSHIVFDVDDGPKSREESKALLAESYRQGVRTIVSTSHRRKGMFETPEEKIAENFLQVREIAKEVASDLVIAYGAE 84 (247)
T ss_dssp EEECCBCCSTTSSSSCSSHHHHHHHHHHHHHTTEEEEECCCEEBTTTBCCCHHHHHHHHHHHHHHHHHHCTTCEEECCCE
T ss_pred CEEEecccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEeeE
Confidence 58999999988 9999998 699999999999999999976321 11 1 1221222 4799999999
Q ss_pred EeeeecCCCCCCCCcEEEEEeeccCCCCccHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCCHH
Q 019951 136 ISTIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGRL 215 (333)
Q Consensus 136 is~~~~~~~~~~~~~vHiL~y~~d~~~~~~~~L~~~l~~~~~~R~~r~~~~i~~L~~~g~~i~~e~l~~~~~~~~~~~~~ 215 (333)
+.... .+.+ .+.+..+ ..+ .+ +
T Consensus 85 ~~~~~--------------------------~~~~------------------~l~~~~~-~~l------~g-----s-- 106 (247)
T 2wje_A 85 IYYTP--------------------------DVLD------------------KLEKKRI-PTL------ND-----S-- 106 (247)
T ss_dssp EECCT--------------------------HHHH------------------HHHTTCS-CCG------GG-----S--
T ss_pred EeecH--------------------------HHHH------------------HHhcCCc-cEE------CC-----C--
Confidence 98631 0000 0000000 000 00 0
Q ss_pred HHHHHHHHcCccchHHHHHHHhhcCCCCcccCCCCCCHHHHHHHHHHhCCEEEEeCCCCCCC---cHHHHHHHHHcCCCE
Q 019951 216 HVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKN---PAAIIRKLKDVGLHG 292 (333)
Q Consensus 216 hia~~Lv~~g~~~~~~~~f~~yl~~~~~~yv~~~~~~~eevI~~I~~aGGvaVLAHP~~~~~---~~~li~~l~~~GlDG 292 (333)
+|+.-.-+ .........++|..|+++|+++|||||.++.. ..+++..+++.|+.
T Consensus 107 --------------------~~vl~e~~--~~~~~~~~~~~i~~i~~~g~~~vlaHp~r~~~~~~~~~~l~~l~~~G~~- 163 (247)
T 2wje_A 107 --------------------RYALIEFS--MNTPYRDIHSALSKILMLGITPVIAHIERYDALENNEKRVRELIDMGCY- 163 (247)
T ss_dssp --------------------SEEEEECC--TTCCHHHHHHHHHHHHTTTCEEEETTGGGCGGGTTCHHHHHHHHHTTCE-
T ss_pred --------------------eEEEEeCC--CCcchHHHHHHHHHHHHCCCcEEEEehhhHHHHhhCHHHHHHHHHCCCE-
Confidence 01000000 00011235789999999999999999998752 36789999999998
Q ss_pred EEEeCCCC--CH------HHHHHHHHHHhhcCC
Q 019951 293 LEVYRSDG--KL------VGVIFTLQDGSLFSL 317 (333)
Q Consensus 293 IEv~~~~~--~~------~~~~~~~~~a~~~~l 317 (333)
+|+.++.. .. ......++.++++|+
T Consensus 164 lEiN~~s~~~~~~~g~~~~~~~~~~~~~~~~gl 196 (247)
T 2wje_A 164 TQVNSSHVLKPKLFGERYKFMKKRAQYFLEQDL 196 (247)
T ss_dssp EEEEHHHHSCCCSSCCSCHHHHHHHHHHHHTTC
T ss_pred EEEecHhhHhcCCCCCcChHHHHHHHHHHHCCC
Confidence 99987654 21 355777888889997
No 12
>2w9m_A Polymerase X; SAXS, DNA repair, DNA polymerase, DNA replication; 2.46A {Deinococcus radiodurans}
Probab=99.53 E-value=3.4e-13 Score=138.59 Aligned_cols=69 Identities=26% Similarity=0.356 Sum_probs=58.4
Q ss_pred CceEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCH------HHHH-------HHHHhCCCEEEEEEEEe
Q 019951 71 NNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGI------PEAI-------ETARRFGMKIIPGVEIS 137 (333)
Q Consensus 71 ~~~~~DLH~HT~~SDG~~sp~eli~~A~~~Gl~~laITDHdt~~g~------~~~~-------~~a~~~gi~~i~GiEis 137 (333)
.++++||||||.||||..+|++++++|++.|++.||||||++..++ ..+. ...++ +|++++|+|++
T Consensus 325 ~~~~~DlH~HT~~SDG~~t~eemv~~A~~~Gl~~IaiTDH~~~~~~~~~~~~~~~~~~~~~i~~l~~~-gi~il~GiEv~ 403 (578)
T 2w9m_A 325 GDLRGMIHTHSTWSDGGASIREMAEATLTLGHEFLGTADHSRAAYYANGLTIERLREQLKEIRELQRA-GLPIVAGSEVD 403 (578)
T ss_dssp GGCCEEEEECCTTTTCSSCHHHHHHHHHHTTCSEEEECEEBTTCGGGTCBCHHHHHHHHHHHHHHHHT-TCCEECEEEEE
T ss_pred hhhceEEEecCCccCCCCCHHHHHHHHHHCCCeEEEEcCCCCccccccCCCHHHHHHHHHHHHHHHhc-CCeEEEeeeec
Confidence 4689999999999999999999999999999999999999998654 2222 22333 99999999999
Q ss_pred eee
Q 019951 138 TIF 140 (333)
Q Consensus 138 ~~~ 140 (333)
+..
T Consensus 404 i~~ 406 (578)
T 2w9m_A 404 ILD 406 (578)
T ss_dssp BCT
T ss_pred ccC
Confidence 864
No 13
>3b0x_A DNA polymerase beta family (X family); structural genomics, riken structural genomics/proteomics in RSGI, polxc, PHP, DRP lyase; HET: DNA DGT; 1.36A {Thermus thermophilus} PDB: 3au2_A* 3au6_A* 3auo_A* 3b0y_A*
Probab=99.47 E-value=3e-12 Score=131.41 Aligned_cols=200 Identities=18% Similarity=0.116 Sum_probs=121.7
Q ss_pred ceEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHH------H-------HHHHHHh-CCCEEEEEEEEe
Q 019951 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIP------E-------AIETARR-FGMKIIPGVEIS 137 (333)
Q Consensus 72 ~~~~DLH~HT~~SDG~~sp~eli~~A~~~Gl~~laITDHdt~~g~~------~-------~~~~a~~-~gi~~i~GiEis 137 (333)
.+++||||||.+|||..+|++++++|++.|++.+|||||+...++. . +.+..++ .+|++++|+|++
T Consensus 336 ~~~~DlH~HT~~SDG~~t~ee~v~~A~~~G~~~iaiTDH~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~i~i~~G~Ei~ 415 (575)
T 3b0x_A 336 QVKGDLQVHSTYSDGQNTLEELWEAAKTMGYRYLAVTDHSPAVRVAGGPSPEEALKRVGEIRRFNETHGPPYLLAGAEVD 415 (575)
T ss_dssp GCCEEEEECCTTTTCSCCHHHHHHHHHHTTCSEEEEEEECTTTTTSSCSCHHHHHHHHHHHHHHHHHHCSSEEEEEEEEE
T ss_pred hcCeeEeecCCccCCCCCHHHHHHHHHHCCCCEEEEcCCCCccccccCCCHHHHHHHHHHHHHHHHhcCCCeEEEEEeec
Confidence 5899999999999999999999999999999999999999987641 2 2222233 489999999999
Q ss_pred eeecCC-CCC---CCCcEEEEEeeccCCCCccHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCC
Q 019951 138 TIFCQR-GSE---SEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPG 213 (333)
Q Consensus 138 ~~~~~~-~~~---~~~~vHiL~y~~d~~~~~~~~L~~~l~~~~~~R~~r~~~~i~~L~~~g~~i~~e~l~~~~~~~~~~~ 213 (333)
+..++. ... .. ...++......... .. .......+++.+....++ .++
T Consensus 416 ~~~dg~l~~~~~~l~-~~d~vL~svH~~~~-~~------------~~~~~~~l~~~i~~g~v~--------------Ila 467 (575)
T 3b0x_A 416 IHPDGTLDYPDWVLR-ELDLVLVSVHSRFN-LP------------KADQTKRLLKALENPFVH--------------VLA 467 (575)
T ss_dssp BCTTSCBSSCHHHHT-TCSEEEEECCSCTT-SC------------HHHHHHHHHHHTTCTTCC--------------EEC
T ss_pred ccCCCCchhHHHHHh-hCCEEEEEeeeCCC-CC------------HHHHHHHHHHHHhcCCCe--------------EEE
Confidence 864211 000 00 11111111110000 00 000112222222221121 233
Q ss_pred HHHHHHHHHHcCccchHHHHHHHhhcCCCCcccCCCCCCHHHHHHHHHHhCCE-EEEeCCCCCCCcHHHHHHHHHcCCCE
Q 019951 214 RLHVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGL-AVLAHPWALKNPAAIIRKLKDVGLHG 292 (333)
Q Consensus 214 ~~hia~~Lv~~g~~~~~~~~f~~yl~~~~~~yv~~~~~~~eevI~~I~~aGGv-aVLAHP~~~~~~~~li~~l~~~GlDG 292 (333)
|| ..+++... + ......+++++.+.+.|-. -|-+++.+......++..+.+.|+-
T Consensus 468 Hp------------------~~r~~~~r-~----~~~~~~~~il~~~~~~g~~lEIN~~~~~~~~~~~~~~~a~e~G~~- 523 (575)
T 3b0x_A 468 HP------------------TARLLGRR-A----PIEADWEAVFQKAKEKGVAVEIDGYYDRMDLPDDLARMAYGMGLW- 523 (575)
T ss_dssp ST------------------TCCBTTTB-C----CCCCCHHHHHHHHHHHTCEEEEECCTTTCBSCHHHHHHHHHTTCC-
T ss_pred CC------------------chhhcCCC-c----CchHHHHHHHHHHHHcCCEEEEeCCCCcCCchHHHHHHHHHcCCe-
Confidence 32 11222111 1 1124577888888887754 5667776554456788889999988
Q ss_pred EEEeCCCCCHHHH---HHHHHHHhhcCCCcccee
Q 019951 293 LEVYRSDGKLVGV---IFTLQDGSLFSLLPLTVL 323 (333)
Q Consensus 293 IEv~~~~~~~~~~---~~~~~~a~~~~l~~~~~~ 323 (333)
+-+-+..|.+.+. .++.+++++.||.+..+.
T Consensus 524 ~vigSDAH~~~~~~~~~~~~~~~~~~g~~~~~v~ 557 (575)
T 3b0x_A 524 ISLSTDAHQTDHLRFMELAVGTAQRAWIGPERVL 557 (575)
T ss_dssp EEEECCBSSGGGGGGHHHHHHHHHHTTCCSTTBG
T ss_pred EEEECCCCChHHhhhHHHHHHHHHHcCCCHHHee
Confidence 6677778876654 788899999999766543
No 14
>3dcp_A Histidinol-phosphatase; HISK, histidine biosynthesis, NESG, LMR141, structural genomics, PSI-2, protein structure initiative; 2.10A {Listeria monocytogenes str}
Probab=99.26 E-value=2e-11 Score=114.92 Aligned_cols=203 Identities=11% Similarity=0.146 Sum_probs=113.0
Q ss_pred eEEceeeeCcCCC-CC-CCHHHHHHHHHHcCCcEEEEecCCCCCC-H---------------------HHHH----HHHH
Q 019951 73 VVFELHSHSNFSD-GY-LSPSKLVERAHCNGVKVLALTDHDTMSG-I---------------------PEAI----ETAR 124 (333)
Q Consensus 73 ~~~DLH~HT~~SD-G~-~sp~eli~~A~~~Gl~~laITDHdt~~g-~---------------------~~~~----~~a~ 124 (333)
|++|+|+||.+|| |+ .++++++++|+++|++.+|||||....+ + .... +..+
T Consensus 1 m~~D~H~Ht~~s~~~~~~~~~e~~~~A~~~G~~~i~~TdH~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~Y~~~i~~l~~ 80 (283)
T 3dcp_A 1 MKRDGHTHTEFCPHGTHDDVEEMVLKAIELDFDEYSIVEHAPLSSEFMKNTAGDKEAVTTASMAMSDLPYYFKKMNHIKK 80 (283)
T ss_dssp CCEEEEECCTTCTTSCCCCHHHHHHHHHHTTCCEEEEEEECCCCHHHHHTBCSCTHHHHTTSCCGGGHHHHHHHHHHHHH
T ss_pred CCeEEeeCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEecCCCCcchhhhcccccccccccccchHHHHHHHHHHHHHHHH
Confidence 4689999999997 55 7999999999999999999999998742 1 1111 1222
Q ss_pred h--CCCEEEEEEEEeeeecCCC------------CC-CCCcEEEEEe-----eccCCCCccHHHHHHHHHHHhhH---HH
Q 019951 125 R--FGMKIIPGVEISTIFCQRG------------SE-SEEPVHILAY-----YSSCGPSKYEELENFLANIRDGR---FL 181 (333)
Q Consensus 125 ~--~gi~~i~GiEis~~~~~~~------------~~-~~~~vHiL~y-----~~d~~~~~~~~L~~~l~~~~~~R---~~ 181 (333)
+ .+|+++.|+|+......-+ .+ .-..||.+.. .+|.++ +.+...+....... .+
T Consensus 81 ~y~~~I~Il~GiE~d~~~g~~d~~~~~l~~~~~~~D~vIgSvH~~~~~~~~~~~D~~~---~~~~~~~~~~~~~~~~~~~ 157 (283)
T 3dcp_A 81 KYASDLLIHIGFEVDYLIGYEDFTRDFLNEYGPQTDDGVLSLHFLEGQGGFRSIDFSA---EDYNEGIVQFYGGFEQAQL 157 (283)
T ss_dssp HTTTTCEEEEEEEEECCTTCHHHHHHHHHHHGGGCSEEEEECCEEEETTEEEESSSCH---HHHHHHTHHHHTSHHHHHH
T ss_pred HccCCCeEEEEEEecccCCcHHHHHHHHHhcCCCCCEEEEeeeEeCCCCceeeccCCH---HHHHHHHHhccCCHHHHHH
Confidence 3 3799999999987531000 01 1134666542 222111 11222111110111 11
Q ss_pred H-HHHHHHHHHhC-C-CCCCHHHHHHHhCCCCCCCHHHHHHHHHHcCccchHHHHHHHhhcCCCC-cccCCCCCCHHHHH
Q 019951 182 R-AKDMILKLNKL-K-LPLKWEHVAKIAGKGVAPGRLHVARAMVEAGHVENLKQAFARYLYDGGP-AYSTGSEPLAEVAV 257 (333)
Q Consensus 182 r-~~~~i~~L~~~-g-~~i~~e~l~~~~~~~~~~~~~hia~~Lv~~g~~~~~~~~f~~yl~~~~~-~yv~~~~~~~eevI 257 (333)
+ ...+++.++.. + +.+ ..+|++..++.+ ...... .+ .|-......+++++
T Consensus 158 ~Y~~~~~~~i~~~l~~~~~------------dilgH~Dlir~~-------------~~~~~~-~~~~~~~~~~~~~~~il 211 (283)
T 3dcp_A 158 AYLEGVKQSIEADLGLFKP------------RRMGHISLCQKF-------------QQFFGE-DTSDFSEEVMEKFRVIL 211 (283)
T ss_dssp HHHHHHHHHHHCCCCTTCC------------SEECCTTGGGTT-------------GGGGTC-CGGGCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCccccCC------------CEEECCcHHHHc-------------Cccccc-ccccccHHHHHHHHHHH
Confidence 1 22333333321 1 111 135665332111 000000 00 00000112378899
Q ss_pred HHHHHhCCE-EEEeCCCCCCC------cHHHHHHHHHcCCCEEEEeCCCCCHHHH
Q 019951 258 QLIHRTGGL-AVLAHPWALKN------PAAIIRKLKDVGLHGLEVYRSDGKLVGV 305 (333)
Q Consensus 258 ~~I~~aGGv-aVLAHP~~~~~------~~~li~~l~~~GlDGIEv~~~~~~~~~~ 305 (333)
+++.+.|.+ -|-+.+.+... ...+++.+.+.|+. |-+-+..|+++++
T Consensus 212 ~~~~~~g~~lEiN~~~l~~~~~~~~yp~~~~~~~~~~~g~~-i~igSDAH~~~~v 265 (283)
T 3dcp_A 212 ALVKKRDYELDFNTAGLFKPLCGETYPPKKIVTLASELQIP-FVYGSDSHGVQDI 265 (283)
T ss_dssp HHHHHHTCEEEEECGGGGSTTCCSCBSCHHHHHHHHHTTCC-EEEECCBSSGGGT
T ss_pred HHHHHcCCEEEEechHhcCCCCCCcCCHHHHHHHHHHcCCC-EEEEcCCCCHHHH
Confidence 999999986 57777765421 36889999999998 5488889998887
No 15
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=98.21 E-value=4.9e-06 Score=74.74 Aligned_cols=53 Identities=9% Similarity=-0.063 Sum_probs=40.3
Q ss_pred EEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCC-CCCHHHHHHHHHhCCCEEEEEEEEeee
Q 019951 74 VFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDT-MSGIPEAIETARRFGMKIIPGVEISTI 139 (333)
Q Consensus 74 ~~DLH~HT~~SDG~~sp~eli~~A~~~Gl~~laITDHdt-~~g~~~~~~~a~~~gi~~i~GiEis~~ 139 (333)
++|||+| +.++++.|+++ ++.+|||||.. +.+...+.+.. .++.+ .|+|+++.
T Consensus 9 ~~D~hvh---------~~e~~~~A~~~-~~~i~itdH~~~~~~~~~~~~l~--~~~~I-~GvEi~~~ 62 (212)
T 1v77_A 9 FIEMDIR---------DKEAYELAKEW-FDEVVVSIKFNEEVDKEKLREAR--KEYGK-VAILLSNP 62 (212)
T ss_dssp CEEEEEC---------SHHHHHHHHHH-CSEEEEEEEESSCCCHHHHHHHH--HHHSC-EEEEEESC
T ss_pred EEEeCcC---------HHHHHHHHHHH-hcEEEEeeccCcccchhhHHHHH--hcCCe-eEEEEecC
Confidence 8999999 99999999999 99999999954 33433333332 23455 99999864
No 16
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=91.55 E-value=0.28 Score=44.12 Aligned_cols=62 Identities=15% Similarity=0.195 Sum_probs=45.0
Q ss_pred ceEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCEEEEEE
Q 019951 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGV 134 (333)
Q Consensus 72 ~~~~DLH~HT~~SDG~~sp~eli~~A~~~Gl~~laITDHdt~~g~~~~~~~a~~~gi~~i~Gi 134 (333)
++.+|.|||-.......+++++++++.+.|++.+.++-.+ ...+..+.+.+++.+..+++++
T Consensus 4 m~~iD~H~Hl~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~~-~~~~~~~~~l~~~~~~~i~~~~ 65 (272)
T 2y1h_A 4 VGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEH-SGEFEKIMQLSERYNGFVLPCL 65 (272)
T ss_dssp CCEEEEEECTTSGGGTTTHHHHHHHHHHTTEEEEEECCSS-GGGHHHHHHHHHHTTTTEEEEE
T ss_pred CcEEEEeeCCCchhhhcCHHHHHHHHHHCCCCEEEEeCCC-HHHHHHHHHHHHHCCCCEEEEE
Confidence 3579999998766444689999999999999987776332 3445666777777665455543
No 17
>2w9m_A Polymerase X; SAXS, DNA repair, DNA polymerase, DNA replication; 2.46A {Deinococcus radiodurans}
Probab=90.38 E-value=0.22 Score=50.82 Aligned_cols=61 Identities=15% Similarity=0.056 Sum_probs=43.1
Q ss_pred HHHHHHHHHhCCEEEEeCCCCC--------C-CcHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHhhcCC
Q 019951 254 EVAVQLIHRTGGLAVLAHPWAL--------K-NPAAIIRKLKDVGLHGLEVYRSDGKLVGVIFTLQDGSLFSL 317 (333)
Q Consensus 254 eevI~~I~~aGGvaVLAHP~~~--------~-~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~~~a~~~~l 317 (333)
+.+++++. .|+++|+|||.+. . ..+.+++.+++.|+ +||+..+.........++++|++ |+
T Consensus 440 ~~~~~ai~-~g~v~IlaHP~~~~~~~~~~~~~~~~~il~~~~e~g~-~lEIN~~~~r~~~~~~~~~~a~e-Gl 509 (578)
T 2w9m_A 440 ERLIRAVS-HPLVTVLGHATGRLLLRRPGYALDLDAVLGACEANGT-VVEINANAARLDLDWREALRWRE-RL 509 (578)
T ss_dssp HHHHHHHT-CSSCCEECSTTCCBTTTBCCCCCCHHHHHHHHHHHTC-EEEEECSTTTCBSCHHHHHHHTT-TC
T ss_pred HHHHHHHh-cCCCeEEECcchhhcCCCcCchhhHHHHHHHHHHCCC-EEEEECCCCCcCcHHHHHHHHHc-CC
Confidence 45566665 5999999999842 1 22568888888885 89999876533345677777887 76
No 18
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=87.02 E-value=1.4 Score=39.04 Aligned_cols=54 Identities=15% Similarity=0.222 Sum_probs=39.1
Q ss_pred eEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCC
Q 019951 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFG 127 (333)
Q Consensus 73 ~~~DLH~HT~~SDG~~sp~eli~~A~~~Gl~~laITDHdt~~g~~~~~~~a~~~g 127 (333)
+.+|.|||-....-..+++++++++.+.|++.+.++-.+ ...+..+.+.+++.+
T Consensus 4 ~~iD~H~Hl~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~~-~~~~~~~~~l~~~~~ 57 (259)
T 1zzm_A 4 RFIDTHCHFDFPPFSGDEEASLQRAAQAGVGKIIVPATE-AENFARVLALAENYQ 57 (259)
T ss_dssp CEEESCBCTTSTTTTTCHHHHHHHHHHTTEEEEEEECCS-GGGHHHHHHHHHHCT
T ss_pred eEEEeeecCCchhhccCHHHHHHHHHHcCCCEEEEecCC-HHHHHHHHHHHHhCC
Confidence 478999998876545579999999999999987765221 334556666666544
No 19
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=84.16 E-value=0.73 Score=42.71 Aligned_cols=61 Identities=18% Similarity=0.215 Sum_probs=42.6
Q ss_pred eEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCC---CEEEEEE
Q 019951 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFG---MKIIPGV 134 (333)
Q Consensus 73 ~~~DLH~HT~~SDG~~sp~eli~~A~~~Gl~~laITDHdt~~g~~~~~~~a~~~g---i~~i~Gi 134 (333)
+.+|-|||-...+-....++++++|.+.|+..+.++= .+...+..+.+.+++.. +.+++.+
T Consensus 2 ~~iD~H~HL~~~~~~~d~~~vl~~a~~~gV~~~v~~g-~~~~~~~~~~~la~~~~~~~~~v~~~~ 65 (287)
T 3rcm_A 2 QLIDIGVNLTNSSFHDQQAAIVERALEAGVTQMLLTG-TSLAVSEQALELCQQLDASGAHLFATA 65 (287)
T ss_dssp CEEEEEECTTCGGGTTCHHHHHHHHHHTTEEEEEECC-CSHHHHHHHHHHHHHHCTTSSSEEEEE
T ss_pred ceEEEeecCCchhcccCHHHHHHHHHHcCCeEEEEec-CCHHHHHHHHHHHHhCCCCCceEEEEE
Confidence 5789999998775556899999999999999988862 12223455666666532 2355444
No 20
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=83.05 E-value=1.4 Score=39.13 Aligned_cols=54 Identities=20% Similarity=0.225 Sum_probs=36.8
Q ss_pred eEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCC
Q 019951 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFG 127 (333)
Q Consensus 73 ~~~DLH~HT~~SDG~~sp~eli~~A~~~Gl~~laITDHdt~~g~~~~~~~a~~~g 127 (333)
+.+|.|||-...+-..+++++++.+.+.|++.+.++--+ ...+..+.+.+++.+
T Consensus 4 ~~iD~H~Hl~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~~-~~~~~~~~~l~~~~~ 57 (264)
T 1xwy_A 4 RMFDIGVNLTSSQFAKDRDDVVACAFDAGVNGLLITGTN-LRESQQAQKLARQYS 57 (264)
T ss_dssp -CEEEEECTTSGGGTTTHHHHHHHHHHTTCCEEEECCCS-HHHHHHHHHHHHHST
T ss_pred cEEEEeeCCCChhhccCHHHHHHHHHHCCCCEEEEeCCC-HHHHHHHHHHHHhCC
Confidence 378999998765434579999999999999987764211 223444555565554
No 21
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=82.84 E-value=1.1 Score=37.86 Aligned_cols=20 Identities=20% Similarity=0.345 Sum_probs=16.7
Q ss_pred CCCCCCHHHHHHHHHHcCCc
Q 019951 84 SDGYLSPSKLVERAHCNGVK 103 (333)
Q Consensus 84 SDG~~sp~eli~~A~~~Gl~ 103 (333)
.||.++..++.......|+.
T Consensus 70 ~~G~i~~~el~~~l~~lg~~ 89 (196)
T 3dtp_E 70 KDGFISKNDIRATFDSLGRL 89 (196)
T ss_dssp CSSBCCHHHHHHHHHTTSCC
T ss_pred CCCcCCHHHHHHHHHHhCCC
Confidence 48999999999988887754
No 22
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=82.56 E-value=2 Score=41.65 Aligned_cols=23 Identities=17% Similarity=-0.055 Sum_probs=19.0
Q ss_pred HHHHHHHHHHhCCEEE--EeCCCCC
Q 019951 253 AEVAVQLIHRTGGLAV--LAHPWAL 275 (333)
Q Consensus 253 ~eevI~~I~~aGGvaV--LAHP~~~ 275 (333)
...++++||+.|+.++ |.|++|.
T Consensus 98 ~k~l~davH~~G~~i~~QL~H~Gr~ 122 (400)
T 4gbu_A 98 WTKIFNAIHEKKSFVWVQLAVLGWA 122 (400)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCGGG
T ss_pred HHHHHHHHHhcCCceEEeeeecCcc
Confidence 5678999999999866 8998753
No 23
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=81.10 E-value=2.3 Score=37.45 Aligned_cols=60 Identities=18% Similarity=0.233 Sum_probs=39.6
Q ss_pred eEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCEEEEEE
Q 019951 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGV 134 (333)
Q Consensus 73 ~~~DLH~HT~~SDG~~sp~eli~~A~~~Gl~~laITDHdt~~g~~~~~~~a~~~gi~~i~Gi 134 (333)
|.+|.|||........+++++++.+.+.|++.+.+.-.+ ......+.+.+++.+- +++++
T Consensus 1 m~iD~H~Hl~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~~-~~~~~~~~~~~~~~p~-~~~~~ 60 (265)
T 2gzx_A 1 MLIDTHVHLNDEQYDDDLSEVITRAREAGVDRMFVVGFN-KSTIERAMKLIDEYDF-LYGII 60 (265)
T ss_dssp -CEEEEECTTSGGGTTTHHHHHHHHHHTTCCEEEEEECS-HHHHHHHHHHHHHCTT-EEEEE
T ss_pred CeEEEeeCCCCcccccCHHHHHHHHHHcCCCEEEEeCCC-HHHHHHHHHHHHhCCC-EEEEE
Confidence 468999998765444579999999999999987776543 1223344555555542 44443
No 24
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=80.48 E-value=1.4 Score=40.58 Aligned_cols=54 Identities=19% Similarity=0.207 Sum_probs=37.1
Q ss_pred eEEceeeeCcCC--CCC--------CCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCC
Q 019951 73 VVFELHSHSNFS--DGY--------LSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFG 127 (333)
Q Consensus 73 ~~~DLH~HT~~S--DG~--------~sp~eli~~A~~~Gl~~laITDHdt~~g~~~~~~~a~~~g 127 (333)
+.+|.|||-... +|. .++++++++|.+.|++.+.++-. +...+..+.+.+++.+
T Consensus 2 ~~iD~H~Hl~~~~~~~~~~~~~~h~~d~~~vl~~~~~~GV~~~v~~~~-~~~~~~~~~~la~~~~ 65 (301)
T 2xio_A 2 KFIDIGINLTDPMFRGIYRGVQKHQDDLQDVIGRAVEIGVKKFMITGG-NLQDSKDALHLAQTNG 65 (301)
T ss_dssp CEEEEEECTTCGGGGTEETTEECSCCCHHHHHHHHHHHTEEEEEECCC-SHHHHHHHHHHHTTCT
T ss_pred eEEEEcCCCCChHhcccccccccCccCHHHHHHHHHHCCCCEEEEeCC-CHHHHHHHHHHHHHCC
Confidence 578999997765 332 58999999999999999888732 1223344455555443
No 25
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=80.35 E-value=0.72 Score=42.05 Aligned_cols=49 Identities=16% Similarity=0.241 Sum_probs=37.4
Q ss_pred eEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhC
Q 019951 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRF 126 (333)
Q Consensus 73 ~~~DLH~HT~~SDG~~sp~eli~~A~~~Gl~~laITDHdt~~g~~~~~~~a~~~ 126 (333)
..+|-|||-.+.+ ..++++++|.+.|+..+.++ .+...+..+.+.+++.
T Consensus 2 ~liDtH~HL~~~~---d~~~vl~~a~~~gV~~i~v~--~~~~~~~~~~~la~~~ 50 (254)
T 3gg7_A 2 SLIDFHVHLDLYP---DPVAVARACEERQLTVLSVT--TTPAAWRGTLALAAGR 50 (254)
T ss_dssp CCEEEEECGGGSS---SHHHHHHHHHHTTCEEEECC--SSGGGHHHHHGGGTTC
T ss_pred ceEEEeeCCCCCC---CHHHHHHHHHHCCCcEEEec--CCHHHHHHHHHHHHhC
Confidence 4689999998654 78999999999999987764 3455566666666654
No 26
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=78.18 E-value=2.3 Score=37.49 Aligned_cols=60 Identities=10% Similarity=0.063 Sum_probs=39.0
Q ss_pred eEEceeeeCcCCCC---CCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCEEEEEE
Q 019951 73 VVFELHSHSNFSDG---YLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGV 134 (333)
Q Consensus 73 ~~~DLH~HT~~SDG---~~sp~eli~~A~~~Gl~~laITDHdt~~g~~~~~~~a~~~gi~~i~Gi 134 (333)
+.+|.|||....+- ..+++++++.+.+.|++.+.+.-.+ ......+.+.+++.+- +++++
T Consensus 2 ~~iD~H~Hl~~~~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~~-~~~~~~~~~~~~~~p~-~~~~~ 64 (265)
T 1yix_A 2 FLVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVATT-LPSYLHMRDLVGERDN-VVFSC 64 (265)
T ss_dssp CEEEEEECGGGSCTTTTCSSHHHHHHHHHHTTEEEEEECCSS-HHHHHHHHHHHCSCTT-EEEEE
T ss_pred cEEEEeeCCCchhhcccccCHHHHHHHHHHCCCCEEEEeCCC-HHHHHHHHHHHHHCCC-eEEEE
Confidence 57999999875432 5689999999999999987764321 1123344455555442 44443
No 27
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=77.94 E-value=3.7 Score=35.27 Aligned_cols=61 Identities=15% Similarity=0.078 Sum_probs=24.4
Q ss_pred HHHHHHHh-CCEEEEeCCCCCCCcHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHhhcCC
Q 019951 256 AVQLIHRT-GGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVGVIFTLQDGSLFSL 317 (333)
Q Consensus 256 vI~~I~~a-GGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~~~a~~~~l 317 (333)
+|+.|++. .+++|.+|+.........++.+.+.|.|+|-+... ...+....+.+.++++|+
T Consensus 43 ~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~~~-~~~~~~~~~~~~~~~~g~ 104 (211)
T 3f4w_A 43 AIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVTVLGV-TDVLTIQSCIRAAKEAGK 104 (211)
T ss_dssp HHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETT-SCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCCCEEEEeCC-CChhHHHHHHHHHHHcCC
Confidence 44444444 24444444432211122244455555555544321 112233444444444443
No 28
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=77.09 E-value=3.1 Score=39.63 Aligned_cols=22 Identities=32% Similarity=0.271 Sum_probs=18.5
Q ss_pred HHHHHHHHHHhCCEEE--EeCCCC
Q 019951 253 AEVAVQLIHRTGGLAV--LAHPWA 274 (333)
Q Consensus 253 ~eevI~~I~~aGGvaV--LAHP~~ 274 (333)
...++++||+.|+.++ |.|++|
T Consensus 81 ~k~l~~avh~~G~~i~~QL~H~Gr 104 (358)
T 4a3u_A 81 WLPITQAVHDAGGLIFAQLWHMGR 104 (358)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCGG
T ss_pred HHHHHHHHHhcCCceeeccccccc
Confidence 5678999999999866 889885
No 29
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=76.74 E-value=1.8 Score=40.99 Aligned_cols=55 Identities=16% Similarity=0.303 Sum_probs=40.1
Q ss_pred CceEEceeeeCcCCC--C--------CCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhC
Q 019951 71 NNVVFELHSHSNFSD--G--------YLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRF 126 (333)
Q Consensus 71 ~~~~~DLH~HT~~SD--G--------~~sp~eli~~A~~~Gl~~laITDHdt~~g~~~~~~~a~~~ 126 (333)
.+..+|-|||-.... | .-..++++++|.+.|+..+.++== +...+..+.+.+++.
T Consensus 25 ~m~~iDtH~HL~~~~f~g~y~gk~~h~~d~~~vl~rA~~aGV~~ii~~g~-~~~~~~~~~~La~~~ 89 (325)
T 3ipw_A 25 AQQFIDIGANLTDDNYFGNYHGKHYHEEDIDVVLQRAERNGLSHIIITSG-CLNDFKKAIEIINKY 89 (325)
T ss_dssp CCCEEEEEECTTSGGGGTEETTEECSCCCHHHHHHHHHHTTEEEEEECCC-SHHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCchHhccccccccccccCHHHHHHHHHHcCCcEEEEccC-CHHHHHHHHHHHHHC
Confidence 357899999988652 2 468999999999999998877632 233455566666654
No 30
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=74.78 E-value=4.4 Score=36.16 Aligned_cols=44 Identities=14% Similarity=-0.074 Sum_probs=33.6
Q ss_pred cHHHHHHHHHcCCCEEEEeCC---CCCHHHHHHHHHHHhhcCCCccc
Q 019951 278 PAAIIRKLKDVGLHGLEVYRS---DGKLVGVIFTLQDGSLFSLLPLT 321 (333)
Q Consensus 278 ~~~li~~l~~~GlDGIEv~~~---~~~~~~~~~~~~~a~~~~l~~~~ 321 (333)
..+.++.+.++|+||||++.. ..+......+.+.++++||....
T Consensus 19 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 65 (294)
T 3vni_A 19 YKYYIEKVAKLGFDILEIAASPLPFYSDIQINELKACAHGNGITLTV 65 (294)
T ss_dssp HHHHHHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHHcCCeEEE
Confidence 367888888999999999843 34566778888888999985544
No 31
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=74.22 E-value=5.6 Score=34.93 Aligned_cols=16 Identities=0% Similarity=-0.199 Sum_probs=7.8
Q ss_pred CHHHHHHHHHHHhhcC
Q 019951 301 KLVGVIFTLQDGSLFS 316 (333)
Q Consensus 301 ~~~~~~~~~~~a~~~~ 316 (333)
+.+.+..+.++|.++|
T Consensus 87 ~~~~~~~~i~~A~~lG 102 (257)
T 3lmz_A 87 SEEEIDRAFDYAKRVG 102 (257)
T ss_dssp SHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhC
Confidence 3444445555555555
No 32
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=74.01 E-value=1.1 Score=41.87 Aligned_cols=71 Identities=15% Similarity=0.154 Sum_probs=49.8
Q ss_pred CCHHHHHHHHHHhCCEEEEeCCCCCCCcHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHhhcCCCccceeecc
Q 019951 251 PLAEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVGVIFTLQDGSLFSLLPLTVLFGH 326 (333)
Q Consensus 251 ~~~eevI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 326 (333)
|...++++.|++.+|++++-|... ...+++.+.+.|+|++.+-+ ..++.+.....+.+-..|+.| .+++|.
T Consensus 217 p~~k~i~~~i~~~~g~~~i~~~~g---~~~~l~~l~~~g~d~~~~d~-~~dl~~~~~~~~~~l~Gn~dp-~~l~gt 287 (338)
T 2eja_A 217 PYVNYLISELKDFSDTPVIYFFRG---SSSFIDLAVDYRADALSVDW-SVDIPELFKIYDKGFQGNLEP-AVLYAS 287 (338)
T ss_dssp HHHHHHHHHHHHHCCCCEEEEESS---HHHHHHHHTTSCCSEEECCT-TSCHHHHHHHCCSEEECCBCG-GGGGSC
T ss_pred HHHHHHHHHHhhcCCCCEEEEcCC---cHHHHHHHHHcCCCEEEeCC-CCCHHHHHHhCCeEEEECCCH-HHhcCC
Confidence 456788999998866888888753 25789999999999887744 345554422225677788887 455653
No 33
>3b0x_A DNA polymerase beta family (X family); structural genomics, riken structural genomics/proteomics in RSGI, polxc, PHP, DRP lyase; HET: DNA DGT; 1.36A {Thermus thermophilus} PDB: 3au2_A* 3au6_A* 3auo_A* 3b0y_A*
Probab=73.83 E-value=2.7 Score=42.62 Aligned_cols=62 Identities=19% Similarity=0.139 Sum_probs=42.6
Q ss_pred HHHHHHHHHhCCEEEEeCCC-CC-----C---CcHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHhhcCC
Q 019951 254 EVAVQLIHRTGGLAVLAHPW-AL-----K---NPAAIIRKLKDVGLHGLEVYRSDGKLVGVIFTLQDGSLFSL 317 (333)
Q Consensus 254 eevI~~I~~aGGvaVLAHP~-~~-----~---~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~~~a~~~~l 317 (333)
++++++++ .|+++|+|||. ++ . ....+++.+.+.|. .||+..+.........+.++|+++|+
T Consensus 452 ~~l~~~i~-~g~v~IlaHp~~r~~~~r~~~~~~~~~il~~~~~~g~-~lEIN~~~~~~~~~~~~~~~a~e~G~ 522 (575)
T 3b0x_A 452 KRLLKALE-NPFVHVLAHPTARLLGRRAPIEADWEAVFQKAKEKGV-AVEIDGYYDRMDLPDDLARMAYGMGL 522 (575)
T ss_dssp HHHHHHTT-CTTCCEECSTTCCBTTTBCCCCCCHHHHHHHHHHHTC-EEEEECCTTTCBSCHHHHHHHHHTTC
T ss_pred HHHHHHHh-cCCCeEEECCchhhcCCCcCchHHHHHHHHHHHHcCC-EEEEeCCCCcCCchHHHHHHHHHcCC
Confidence 44555555 79999999998 22 1 12457888888885 79997654322223677888999996
No 34
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=73.83 E-value=5.3 Score=38.21 Aligned_cols=22 Identities=23% Similarity=0.271 Sum_probs=18.1
Q ss_pred HHHHHHHHHHhCCEEE--EeCCCC
Q 019951 253 AEVAVQLIHRTGGLAV--LAHPWA 274 (333)
Q Consensus 253 ~eevI~~I~~aGGvaV--LAHP~~ 274 (333)
...++++||+.|+.++ |.|++|
T Consensus 89 ~k~l~~avH~~G~~i~~QL~H~Gr 112 (361)
T 3gka_A 89 WRLVTDAVHAAGGRIFLQLWHVGR 112 (361)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCTT
T ss_pred HHHHHHHHHhcCCeEEEeeccCCc
Confidence 5678999999999765 788875
No 35
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=73.04 E-value=5.7 Score=38.02 Aligned_cols=22 Identities=23% Similarity=0.227 Sum_probs=18.1
Q ss_pred HHHHHHHHHHhCCEEE--EeCCCC
Q 019951 253 AEVAVQLIHRTGGLAV--LAHPWA 274 (333)
Q Consensus 253 ~eevI~~I~~aGGvaV--LAHP~~ 274 (333)
...++++||+.|+.++ |.|++|
T Consensus 81 ~k~l~~avH~~G~~i~~QL~H~Gr 104 (362)
T 4ab4_A 81 WNNVTKAVHAAGGRIFLQLWHVGR 104 (362)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCTT
T ss_pred HHHHHHHHHhcCCEEEEEeccCcc
Confidence 5678999999999865 788875
No 36
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=72.19 E-value=7.6 Score=34.02 Aligned_cols=36 Identities=11% Similarity=-0.062 Sum_probs=18.5
Q ss_pred HHHHHHHcCCCEEEEeCCC--CCHHHHHHHHHHHhhcCC
Q 019951 281 IIRKLKDVGLHGLEVYRSD--GKLVGVIFTLQDGSLFSL 317 (333)
Q Consensus 281 li~~l~~~GlDGIEv~~~~--~~~~~~~~~~~~a~~~~l 317 (333)
+-+.+.+.||. +.+.++. .+.+.+..+.++|.++|-
T Consensus 68 ~~~~l~~~gl~-i~~~~~~~~~~~~~~~~~i~~A~~lGa 105 (262)
T 3p6l_A 68 IKELAASKGIK-IVGTGVYVAEKSSDWEKMFKFAKAMDL 105 (262)
T ss_dssp HHHHHHHTTCE-EEEEEEECCSSTTHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCe-EEEEeccCCccHHHHHHHHHHHHHcCC
Confidence 34455566665 3333322 234455666666666664
No 37
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=72.04 E-value=6.4 Score=36.94 Aligned_cols=22 Identities=18% Similarity=0.122 Sum_probs=17.8
Q ss_pred HHHHHHHHHHhCCEEE--EeCCCC
Q 019951 253 AEVAVQLIHRTGGLAV--LAHPWA 274 (333)
Q Consensus 253 ~eevI~~I~~aGGvaV--LAHP~~ 274 (333)
...+++++|+.|+.++ |.|.++
T Consensus 85 ~~~~~~~vh~~g~~i~~QL~h~Gr 108 (338)
T 1z41_A 85 FAKLTEQVKEQGSKIGIQLAHAGR 108 (338)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHhcCCEEEEEecCCCc
Confidence 5678899999999755 899765
No 38
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=71.00 E-value=6.4 Score=37.33 Aligned_cols=22 Identities=23% Similarity=0.259 Sum_probs=18.4
Q ss_pred HHHHHHHHHHhCCEEE--EeCCCC
Q 019951 253 AEVAVQLIHRTGGLAV--LAHPWA 274 (333)
Q Consensus 253 ~eevI~~I~~aGGvaV--LAHP~~ 274 (333)
...++++||+.|+.++ |.|++|
T Consensus 83 ~~~~~~~vh~~G~~i~~QL~H~Gr 106 (343)
T 3kru_A 83 LKKIVDICKANGAVMGIQLAHAGR 106 (343)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHhcCCceEeeehhhccC
Confidence 5679999999999866 788775
No 39
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=70.61 E-value=3.9 Score=38.19 Aligned_cols=72 Identities=19% Similarity=0.204 Sum_probs=44.0
Q ss_pred HHHHHHHHHHhCCEEEEeCCCCCCCcHHHHHHHHHcCCCEEE----Ee--------CCCCCHHHHHHHHHHHhhcCCC-c
Q 019951 253 AEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLE----VY--------RSDGKLVGVIFTLQDGSLFSLL-P 319 (333)
Q Consensus 253 ~eevI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIE----v~--------~~~~~~~~~~~~~~~a~~~~l~-~ 319 (333)
+.++++.|++..|+.+-.+|+.. ..+.++.|+++|++.+- .. ++.++.++...+.+.+++.|+. -
T Consensus 128 ~~~l~~~ik~~~~i~i~~s~g~~--~~e~l~~L~~aG~~~i~i~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~ 205 (350)
T 3t7v_A 128 FVELVQIVKEELGLPIMISPGLM--DNATLLKAREKGANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQGYCVE 205 (350)
T ss_dssp HHHHHHHHHHHHCSCEEEECSSC--CHHHHHHHHHTTEEEEECCCBCSCHHHHHHHSTTCCHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHhhcCceEEEeCCCC--CHHHHHHHHHcCCCEEEEeeecCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeEc
Confidence 35677777765456666666542 35677777777777543 22 1335566667777778888872 2
Q ss_pred cceeecc
Q 019951 320 LTVLFGH 326 (333)
Q Consensus 320 ~~~~~~~ 326 (333)
.++.||.
T Consensus 206 ~~~i~Gl 212 (350)
T 3t7v_A 206 DGILTGV 212 (350)
T ss_dssp EEEEESS
T ss_pred cceEeec
Confidence 3455666
No 40
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=70.01 E-value=4.9 Score=37.98 Aligned_cols=23 Identities=26% Similarity=0.173 Sum_probs=18.9
Q ss_pred CHHHHHHHHHHhCCEEE--EeCCCC
Q 019951 252 LAEVAVQLIHRTGGLAV--LAHPWA 274 (333)
Q Consensus 252 ~~eevI~~I~~aGGvaV--LAHP~~ 274 (333)
....++++||+.|+.++ |.|+++
T Consensus 84 ~~~~~~~~vh~~G~~i~~QL~H~Gr 108 (340)
T 3gr7_A 84 GLRELVGLVKEHGAAIGIQLAHAGR 108 (340)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHHhCCCeEEEEeccCCC
Confidence 35789999999999866 788775
No 41
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=69.83 E-value=9.9 Score=33.76 Aligned_cols=13 Identities=8% Similarity=0.281 Sum_probs=7.1
Q ss_pred CHHHHHHHHHHhC
Q 019951 252 LAEVAVQLIHRTG 264 (333)
Q Consensus 252 ~~eevI~~I~~aG 264 (333)
+++++++.+++.|
T Consensus 39 ~~~~~l~~~~~~G 51 (287)
T 3kws_A 39 SLNEKLDFMEKLG 51 (287)
T ss_dssp SHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHcC
Confidence 4555555555554
No 42
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=68.85 E-value=4 Score=36.57 Aligned_cols=44 Identities=16% Similarity=0.055 Sum_probs=33.7
Q ss_pred HHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHhhcCCCccce
Q 019951 279 AAIIRKLKDVGLHGLEVYRSDGKLVGVIFTLQDGSLFSLLPLTV 322 (333)
Q Consensus 279 ~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~~~a~~~~l~~~~~ 322 (333)
.+.++.+.++|+||||++...........+.+.++++||....+
T Consensus 44 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~~~~ 87 (290)
T 2zvr_A 44 RKGMELAKRVGYQAVEIAVRDPSIVDWNEVKILSEELNLPICAI 87 (290)
T ss_dssp HHHHHHHHHHTCSEEEEECSCGGGSCHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHhCCCEEEEcCCCcchhhHHHHHHHHHHcCCeEEEE
Confidence 56788888999999999876443455677888889999866444
No 43
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=68.76 E-value=8.5 Score=33.97 Aligned_cols=43 Identities=2% Similarity=-0.083 Sum_probs=33.1
Q ss_pred CcHHHHHHHHHcCCCEEEEeCC--------CCCHHHHHHHHHHHhhcCCCc
Q 019951 277 NPAAIIRKLKDVGLHGLEVYRS--------DGKLVGVIFTLQDGSLFSLLP 319 (333)
Q Consensus 277 ~~~~li~~l~~~GlDGIEv~~~--------~~~~~~~~~~~~~a~~~~l~~ 319 (333)
...+.++.+.++|++|||++.. ..+......+.+.++++||.+
T Consensus 13 ~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~ 63 (287)
T 2x7v_A 13 GFDRVPQDTVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKHGIDW 63 (287)
T ss_dssp CGGGHHHHHHHTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHHHTCCG
T ss_pred CHHHHHHHHHHcCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHHcCCCc
Confidence 3467889999999999999752 123466788888999999975
No 44
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=68.54 E-value=5.1 Score=39.08 Aligned_cols=23 Identities=26% Similarity=0.281 Sum_probs=19.0
Q ss_pred CHHHHHHHHHHhCCEEE--EeCCCC
Q 019951 252 LAEVAVQLIHRTGGLAV--LAHPWA 274 (333)
Q Consensus 252 ~~eevI~~I~~aGGvaV--LAHP~~ 274 (333)
....++++||+.|+.++ |.|++|
T Consensus 105 ~~k~l~~avh~~G~~i~~QL~H~Gr 129 (419)
T 3l5a_A 105 GLTNMASTMKQHGSLAIIQLAHAGR 129 (419)
T ss_dssp HHHHHHHHHHTTSCEEEEEEECCGG
T ss_pred HHHHHHHHHHhcCCEEEEEeccCCC
Confidence 36788999999999866 789876
No 45
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=68.41 E-value=6.6 Score=37.12 Aligned_cols=23 Identities=22% Similarity=0.169 Sum_probs=18.4
Q ss_pred CHHHHHHHHHHhCCEEE--EeCCCC
Q 019951 252 LAEVAVQLIHRTGGLAV--LAHPWA 274 (333)
Q Consensus 252 ~~eevI~~I~~aGGvaV--LAHP~~ 274 (333)
....++++||+.|+.++ |.|++|
T Consensus 82 ~~~~~~~~vh~~G~~i~~Ql~H~Gr 106 (349)
T 3hgj_A 82 GLKELARRIREAGAVPGIQLAHAGR 106 (349)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHHhCCCeEEEEeccCCc
Confidence 35789999999999866 788764
No 46
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=67.88 E-value=2.4 Score=40.90 Aligned_cols=41 Identities=24% Similarity=0.247 Sum_probs=31.5
Q ss_pred CccccccccccccCCceEEceeeeCcCCCCCCCHHHHHHHHHHcCCc
Q 019951 57 DDFGVHQILNRAVDNNVVFELHSHSNFSDGYLSPSKLVERAHCNGVK 103 (333)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~DLH~HT~~SDG~~sp~eli~~A~~~Gl~ 103 (333)
+..++.+.|-|. ..+++||+|- ||+++|+.+++.|+++|++
T Consensus 17 ~~~~~~~~Fi~~---LPKvELH~HL---dGsl~p~tl~~LA~~~g~~ 57 (380)
T 4gxw_A 17 EITAAHRAFFHA---LPKVELHCHL---LGAVRHDTFVALAQRSGAP 57 (380)
T ss_dssp CCCHHHHHHHHH---SCEEECCBBG---GGCCCHHHHHHHHHHHTCS
T ss_pred cCCHHHHHHHHh---ChhHHhhcCC---cCCCCHHHHHHHHHHhCCC
Confidence 444444444443 3579999995 7999999999999999986
No 47
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=67.23 E-value=6.7 Score=38.21 Aligned_cols=22 Identities=18% Similarity=0.188 Sum_probs=17.8
Q ss_pred HHHHHHHHHHhCCEEE--EeCCCC
Q 019951 253 AEVAVQLIHRTGGLAV--LAHPWA 274 (333)
Q Consensus 253 ~eevI~~I~~aGGvaV--LAHP~~ 274 (333)
...++++||+.|+.++ |.|++|
T Consensus 94 ~k~l~~avH~~G~~i~~QL~H~Gr 117 (407)
T 3tjl_A 94 WKVITDKVHANGSFVSTQLIFLGR 117 (407)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHhcCCEEEEEeccCCC
Confidence 5678899999999866 788775
No 48
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=67.13 E-value=9.6 Score=34.76 Aligned_cols=68 Identities=7% Similarity=0.038 Sum_probs=51.5
Q ss_pred HHHHHHHHHHhCCEEEEeCCC-----CCCCcHHHHHHHHHcCCCEEEEeCCC--CCHHHHHHHHHHHhhcCCCcc
Q 019951 253 AEVAVQLIHRTGGLAVLAHPW-----ALKNPAAIIRKLKDVGLHGLEVYRSD--GKLVGVIFTLQDGSLFSLLPL 320 (333)
Q Consensus 253 ~eevI~~I~~aGGvaVLAHP~-----~~~~~~~li~~l~~~GlDGIEv~~~~--~~~~~~~~~~~~a~~~~l~~~ 320 (333)
+++.|++.|++|--+..-..+ ....-++.+++..++|+|.||+.... -+.++...+.+.+.+.||.++
T Consensus 57 l~eki~l~~~~gV~v~~GGTl~E~~~~qg~~~~yl~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~~~~G~~v~ 131 (251)
T 1qwg_A 57 VKEKINYYKDWGIKVYPGGTLFEYAYSKGKFDEFLNECEKLGFEAVEISDGSSDISLEERNNAIKRAKDNGFMVL 131 (251)
T ss_dssp HHHHHHHHHTTTCEEEECHHHHHHHHHTTCHHHHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHcCCeEECCcHHHHHHHHcCcHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHCCCEEe
Confidence 788999999998444432211 01233778999999999999999875 467788999999999999664
No 49
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=67.08 E-value=6.5 Score=37.38 Aligned_cols=22 Identities=27% Similarity=0.249 Sum_probs=17.7
Q ss_pred HHHHHHHHHHhCCEEE--EeCCCC
Q 019951 253 AEVAVQLIHRTGGLAV--LAHPWA 274 (333)
Q Consensus 253 ~eevI~~I~~aGGvaV--LAHP~~ 274 (333)
...++++||+.|+.++ |.|++|
T Consensus 82 ~~~~~~~vh~~G~~i~~QL~H~Gr 105 (363)
T 3l5l_A 82 FVPVVQAIKAAGSVPGIQIAHAGR 105 (363)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHhcCCEEEEEeccCCc
Confidence 5678999999999866 788764
No 50
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=66.84 E-value=9.3 Score=34.12 Aligned_cols=46 Identities=7% Similarity=-0.086 Sum_probs=35.1
Q ss_pred cHHHHHHHHHcCCCEEEEeCCCC---------CHHHHHHHHHHHhhcCCCcccee
Q 019951 278 PAAIIRKLKDVGLHGLEVYRSDG---------KLVGVIFTLQDGSLFSLLPLTVL 323 (333)
Q Consensus 278 ~~~li~~l~~~GlDGIEv~~~~~---------~~~~~~~~~~~a~~~~l~~~~~~ 323 (333)
..+.++.+.++|++|||++.... +.+....+.+.++++||....+-
T Consensus 32 ~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~ 86 (295)
T 3cqj_A 32 WLERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVPSMC 86 (295)
T ss_dssp HHHHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 36788888999999999986542 45666788889999998665544
No 51
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=65.55 E-value=13 Score=35.91 Aligned_cols=22 Identities=23% Similarity=0.274 Sum_probs=17.5
Q ss_pred HHHHHHHHHHhCCEEE--EeCCCC
Q 019951 253 AEVAVQLIHRTGGLAV--LAHPWA 274 (333)
Q Consensus 253 ~eevI~~I~~aGGvaV--LAHP~~ 274 (333)
...++++||+.|+.++ |.|++|
T Consensus 95 ~k~l~~avh~~G~~i~~QL~H~Gr 118 (402)
T 2hsa_B 95 WKKIVDVVHAKGAVIFCQLWHVGR 118 (402)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCTT
T ss_pred HHHHHHHHHhcCCeEEEEeccCCc
Confidence 5678899999999755 888665
No 52
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=65.40 E-value=8.4 Score=39.50 Aligned_cols=23 Identities=39% Similarity=0.410 Sum_probs=18.4
Q ss_pred CHHHHHHHHHHhCCEEE--EeCCCC
Q 019951 252 LAEVAVQLIHRTGGLAV--LAHPWA 274 (333)
Q Consensus 252 ~~eevI~~I~~aGGvaV--LAHP~~ 274 (333)
...++++++|+.|+.++ |.|+++
T Consensus 90 ~~~~~~~~vh~~g~~i~~Ql~h~Gr 114 (690)
T 3k30_A 90 ALKRIADAIHEGGGLAGIELAHNGM 114 (690)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHHhcCCEEEEEccCCcc
Confidence 35688999999999755 799765
No 53
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=65.35 E-value=9.5 Score=36.50 Aligned_cols=22 Identities=23% Similarity=0.294 Sum_probs=17.6
Q ss_pred HHHHHHHHHHhCCEEE--EeCCCC
Q 019951 253 AEVAVQLIHRTGGLAV--LAHPWA 274 (333)
Q Consensus 253 ~eevI~~I~~aGGvaV--LAHP~~ 274 (333)
...++++||+.|+.++ |.|++|
T Consensus 93 ~k~l~~avh~~G~~i~~QL~H~Gr 116 (376)
T 1icp_A 93 WKPIVDAVHAKGGIFFCQIWHVGR 116 (376)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCTT
T ss_pred HHHHHHHHHhcCCeEEEEeecCCC
Confidence 5678899999999755 899665
No 54
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=65.07 E-value=10 Score=33.12 Aligned_cols=67 Identities=13% Similarity=0.026 Sum_probs=38.7
Q ss_pred CCHHHHHHHHHHhC--CEEEEe-CCCCC----CCcHHHHHHHHHcCCCEEE--EeCCCCC-----HHHHHHHHHHHhhcC
Q 019951 251 PLAEVAVQLIHRTG--GLAVLA-HPWAL----KNPAAIIRKLKDVGLHGLE--VYRSDGK-----LVGVIFTLQDGSLFS 316 (333)
Q Consensus 251 ~~~eevI~~I~~aG--GvaVLA-HP~~~----~~~~~li~~l~~~GlDGIE--v~~~~~~-----~~~~~~~~~~a~~~~ 316 (333)
.+.+++++.++++| ||-+.. .|... ....++-+.+.+.||.-.. +.++.+. .+.+..+.++|.++|
T Consensus 19 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG 98 (272)
T 2q02_A 19 LSIEAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGVG 98 (272)
T ss_dssp SCHHHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeEEechhhhccCCcHHHHHHHHHHHHHHHHHhC
Confidence 46788999999887 444433 22111 1234566677788876322 2233221 233477788888888
Q ss_pred C
Q 019951 317 L 317 (333)
Q Consensus 317 l 317 (333)
-
T Consensus 99 ~ 99 (272)
T 2q02_A 99 A 99 (272)
T ss_dssp C
T ss_pred C
Confidence 5
No 55
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=64.90 E-value=6.5 Score=35.56 Aligned_cols=64 Identities=19% Similarity=0.135 Sum_probs=41.7
Q ss_pred eEEceeeeCcCC--CC-----C----CCHH-HH---HHHHHHcCCcEEEEecCCCC-CCHHHHHHHHHhCCCEEEEEEEE
Q 019951 73 VVFELHSHSNFS--DG-----Y----LSPS-KL---VERAHCNGVKVLALTDHDTM-SGIPEAIETARRFGMKIIPGVEI 136 (333)
Q Consensus 73 ~~~DLH~HT~~S--DG-----~----~sp~-el---i~~A~~~Gl~~laITDHdt~-~g~~~~~~~a~~~gi~~i~GiEi 136 (333)
-.+|.|+|...+ +. . ++.. .+ +++|.+.|+..+...=++.. .....+.+.+++.++.+++++-+
T Consensus 17 G~iD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~~~~~~~~v~~~~G~ 96 (314)
T 2vc7_A 17 GFTLIHEHLRVFSEAVRQQWPHLYNEDEEFRNAVNEVKRAMQFGVKTIVDPTVMGLGRDIRFMEKVVKATGINLVAGTGI 96 (314)
T ss_dssp CSEESSCBSCBCCHHHHHHCGGGCCHHHHHHHHHHHHHHHHHTTCCEEEECCCBTTTCCHHHHHHHHHHHCCEEEECEEB
T ss_pred CCcccccccccCcchhcccCcchhhhcccHHHHHHHHHHHHHcCCCEEEecCCCCCCcCHHHHHHHHHHcCCeEEEEeec
Confidence 578999999763 21 1 0122 23 48889999998876666533 23666677777778777766544
No 56
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=64.49 E-value=8.7 Score=33.91 Aligned_cols=42 Identities=12% Similarity=0.097 Sum_probs=33.1
Q ss_pred HHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHhhcCCCccce
Q 019951 279 AAIIRKLKDVGLHGLEVYRSDGKLVGVIFTLQDGSLFSLLPLTV 322 (333)
Q Consensus 279 ~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~~~a~~~~l~~~~~ 322 (333)
.+.++.++++|+||||++.+.. .....+.+..+++||.+..+
T Consensus 26 ~~~l~~~~~~G~~~vEl~~~~~--~~~~~~~~~l~~~gl~~~~~ 67 (269)
T 3ngf_A 26 LERFRLAAEAGFGGVEFLFPYD--FDADVIARELKQHNLTQVLF 67 (269)
T ss_dssp HHHHHHHHHTTCSEEECSCCTT--SCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHcCCCEEEecCCcc--CCHHHHHHHHHHcCCcEEEE
Confidence 6788999999999999987643 24677888899999865543
No 57
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=64.25 E-value=11 Score=34.14 Aligned_cols=61 Identities=15% Similarity=0.149 Sum_probs=42.8
Q ss_pred HHHHHHHHhC-CEEEEeCCCCCCCcHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHhhcCCC
Q 019951 255 VAVQLIHRTG-GLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVGVIFTLQDGSLFSLL 318 (333)
Q Consensus 255 evI~~I~~aG-GvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~~~a~~~~l~ 318 (333)
++|+.|++.. -+++.+|-. ..++...++.++++|.|.|.+..... .....+.+.++++|..
T Consensus 75 ~~v~~lr~~~p~~~ldvHLm-v~~p~~~i~~~~~aGAd~itvH~Ea~--~~~~~~i~~ir~~G~k 136 (246)
T 3inp_A 75 MVLKALRDYGITAGMDVHLM-VKPVDALIESFAKAGATSIVFHPEAS--EHIDRSLQLIKSFGIQ 136 (246)
T ss_dssp HHHHHHHHHTCCSCEEEEEE-CSSCHHHHHHHHHHTCSEEEECGGGC--SCHHHHHHHHHTTTSE
T ss_pred HHHHHHHHhCCCCeEEEEEe-eCCHHHHHHHHHHcCCCEEEEccccc--hhHHHHHHHHHHcCCe
Confidence 6788888877 677888865 34556778888888888887765433 2456666777777653
No 58
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=62.67 E-value=8.4 Score=34.04 Aligned_cols=43 Identities=9% Similarity=0.030 Sum_probs=31.5
Q ss_pred HHHHHHHHHcCCCEEEEeCCCCCH---HHHHHHHHHHhhcCCCccc
Q 019951 279 AAIIRKLKDVGLHGLEVYRSDGKL---VGVIFTLQDGSLFSLLPLT 321 (333)
Q Consensus 279 ~~li~~l~~~GlDGIEv~~~~~~~---~~~~~~~~~a~~~~l~~~~ 321 (333)
.+.++.+.++|+||||+....... .....+.+.++++||....
T Consensus 20 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~ 65 (290)
T 2qul_A 20 PATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMC 65 (290)
T ss_dssp HHHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEE
Confidence 567888888899999988654322 5567788888888885544
No 59
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=62.54 E-value=4.9 Score=37.04 Aligned_cols=40 Identities=15% Similarity=-0.099 Sum_probs=21.1
Q ss_pred HHHHHHHHHc-CCCEEEEeCCCCCHHHHHHHHHHHhhcCCC
Q 019951 279 AAIIRKLKDV-GLHGLEVYRSDGKLVGVIFTLQDGSLFSLL 318 (333)
Q Consensus 279 ~~li~~l~~~-GlDGIEv~~~~~~~~~~~~~~~~a~~~~l~ 318 (333)
.+.++.++++ |++|||+..+.........+.+.++++||.
T Consensus 36 ~e~l~~aa~~~G~~~VEl~~~~~~~~~~~~l~~~l~~~Gl~ 76 (333)
T 3ktc_A 36 IDQINAAKEVGELSYVDLPYPFTPGVTLSEVKDALKDAGLK 76 (333)
T ss_dssp HHHHHHHHHHSSEEEEEEEESCSTTCCHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHhCCCCEEEecCCCcchhHHHHHHHHHHHcCCe
Confidence 4455555556 666666654443333445555555555553
No 60
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=61.46 E-value=15 Score=34.95 Aligned_cols=22 Identities=18% Similarity=0.181 Sum_probs=17.3
Q ss_pred HHHHHHHHHHhCCEEE--EeCCCC
Q 019951 253 AEVAVQLIHRTGGLAV--LAHPWA 274 (333)
Q Consensus 253 ~eevI~~I~~aGGvaV--LAHP~~ 274 (333)
...+++++|+.|+.++ |.|++|
T Consensus 83 ~~~l~~~vh~~g~~i~~QL~H~Gr 106 (365)
T 2gou_A 83 WRIVTEAVHAKGCAIFAQLWHVGR 106 (365)
T ss_dssp HHHHHHHHHHHSCEEEEEEECCTT
T ss_pred HHHHHHHHHhcCCeEEEEeecCCC
Confidence 5678899999999755 888665
No 61
>1akh_A Protein (mating-type protein A-1); complex (TWO DNA-binding proteins/DNA), complex, DNA- binding protein, DNA; HET: DNA; 2.50A {Saccharomyces cerevisiae} SCOP: a.4.1.1 PDB: 1f43_A 1yrn_A*
Probab=61.31 E-value=10 Score=26.12 Aligned_cols=24 Identities=21% Similarity=0.307 Sum_probs=12.2
Q ss_pred hhhcCCCCCCCCHHHHHHHHHHHH
Q 019951 19 KQKRGGGKKKMTAEQSLAFNSVTE 42 (333)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~ 42 (333)
|+++++++...|.+|...|...+.
T Consensus 2 k~k~rr~Rt~ft~~q~~~Le~~f~ 25 (61)
T 1akh_A 2 KEKSPKGKSSISPQARAFLEEVFR 25 (61)
T ss_dssp ----------CCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHH
Confidence 344555667789999999988874
No 62
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=59.56 E-value=7.9 Score=34.29 Aligned_cols=67 Identities=15% Similarity=0.026 Sum_probs=33.1
Q ss_pred CCHHHHHHHHHHhCC--EEEEe-CCCCC-----CCcHHHHHHHHHcCCCEEEEeCCCC---C-------HHHHHHHHHHH
Q 019951 251 PLAEVAVQLIHRTGG--LAVLA-HPWAL-----KNPAAIIRKLKDVGLHGLEVYRSDG---K-------LVGVIFTLQDG 312 (333)
Q Consensus 251 ~~~eevI~~I~~aGG--vaVLA-HP~~~-----~~~~~li~~l~~~GlDGIEv~~~~~---~-------~~~~~~~~~~a 312 (333)
.+.+++++.++++|- |-+.. |+..+ ....++-+.+.+.||. +-+..+.. . .+.+..+.++|
T Consensus 15 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A 93 (286)
T 3dx5_A 15 ISFTDIVQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTLE-ITMISDYLDISLSADFEKTIEKCEQLAILA 93 (286)
T ss_dssp CCHHHHHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTCC-EEEEECCCCCSTTSCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcCCe-EEEEecCCCCCCchhHHHHHHHHHHHHHHH
Confidence 467778888888763 33321 11000 0112334455666776 33332221 1 12335667777
Q ss_pred hhcCCC
Q 019951 313 SLFSLL 318 (333)
Q Consensus 313 ~~~~l~ 318 (333)
.++|-.
T Consensus 94 ~~lG~~ 99 (286)
T 3dx5_A 94 NWFKTN 99 (286)
T ss_dssp HHHTCC
T ss_pred HHhCCC
Confidence 777753
No 63
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=59.52 E-value=7.7 Score=34.50 Aligned_cols=66 Identities=12% Similarity=-0.075 Sum_probs=42.0
Q ss_pred CCCHHHHHHHHHHhCCEEE-EeCCCCCCCcHHHHHHHHHcCCCEEEEeCCCC--------CHHHHHHHHHHHhhcCC
Q 019951 250 EPLAEVAVQLIHRTGGLAV-LAHPWALKNPAAIIRKLKDVGLHGLEVYRSDG--------KLVGVIFTLQDGSLFSL 317 (333)
Q Consensus 250 ~~~~eevI~~I~~aGGvaV-LAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~--------~~~~~~~~~~~a~~~~l 317 (333)
..+.+++++.++++|--.| +.+++. ...++-+.+.+.||.-.-++++.. ..+.+..+.++|.++|-
T Consensus 30 ~~~~~~~l~~~~~~G~~~vEl~~~~~--~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~ 104 (301)
T 3cny_A 30 DNNLQQLLSDIVVAGFQGTEVGGFFP--GPEKLNYELKLRNLEIAGQWFSSYIIRDGIEKASEAFEKHCQYLKAINA 104 (301)
T ss_dssp TCCHHHHHHHHHHHTCCEECCCTTCC--CHHHHHHHHHHTTCEECEEEEEECHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHhCCCEEEecCCCC--CHHHHHHHHHHCCCeEEEEeccCCCChhhHHHHHHHHHHHHHHHHHcCC
Confidence 3578999999999975444 445543 345566777888876333322211 12344777889999995
No 64
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=59.47 E-value=3.1 Score=36.56 Aligned_cols=77 Identities=16% Similarity=0.016 Sum_probs=42.3
Q ss_pred CCHHHHHHHHHHhCC--EEEEeCCCCCCCcHHHHHHHHHcCCC--EEEEeCC--CCCH-------HHHHHHHHHHhhcCC
Q 019951 251 PLAEVAVQLIHRTGG--LAVLAHPWALKNPAAIIRKLKDVGLH--GLEVYRS--DGKL-------VGVIFTLQDGSLFSL 317 (333)
Q Consensus 251 ~~~eevI~~I~~aGG--vaVLAHP~~~~~~~~li~~l~~~GlD--GIEv~~~--~~~~-------~~~~~~~~~a~~~~l 317 (333)
.+.+++++.++++|- +-+...+.......++.+.+.+.||. ++..+.. ..++ +.+..+.++|..+|-
T Consensus 18 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~lG~ 97 (275)
T 3qc0_A 18 CGFAEAVDICLKHGITAIAPWRDQVAAIGLGEAGRIVRANGLKLTGLCRGGFFPAPDASGREKAIDDNRRAVDEAAELGA 97 (275)
T ss_dssp CCHHHHHHHHHHTTCCEEECBHHHHHHHCHHHHHHHHHHHTCEESCEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHcCCCEEEeccccccccCHHHHHHHHHHcCCceEEeecCCCcCCCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 468889999998874 33333111111224556667777865 2222111 1122 344677888999887
Q ss_pred Cccceeeccc
Q 019951 318 LPLTVLFGHF 327 (333)
Q Consensus 318 ~~~~~~~~~~ 327 (333)
.-..+-.|.+
T Consensus 98 ~~v~~~~g~~ 107 (275)
T 3qc0_A 98 DCLVLVAGGL 107 (275)
T ss_dssp SCEEEECBCC
T ss_pred CEEEEeeCCC
Confidence 5555555544
No 65
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=59.41 E-value=9.7 Score=34.55 Aligned_cols=44 Identities=11% Similarity=-0.138 Sum_probs=31.7
Q ss_pred HHHHHHHHcCCCEEEEeCCCCCHH--------HHHHHHHHHhhcCCCcccee
Q 019951 280 AIIRKLKDVGLHGLEVYRSDGKLV--------GVIFTLQDGSLFSLLPLTVL 323 (333)
Q Consensus 280 ~li~~l~~~GlDGIEv~~~~~~~~--------~~~~~~~~a~~~~l~~~~~~ 323 (333)
..++.+.++|+||||++.....+. ....+.+.++++||....+-
T Consensus 39 ~~~~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~i~~~~ 90 (316)
T 3qxb_A 39 LAGLVRDDLGLEYVQYTYDLTDPWWPDIERDRRAIAYAKAFRKAGLTIESTF 90 (316)
T ss_dssp HHHHHHHTSCCCEEEEETTTSCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEeeccccCccccccchhhHHHHHHHHHHHcCCeEEEee
Confidence 345677899999999986543322 45778889999999665443
No 66
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=59.37 E-value=7.5 Score=35.36 Aligned_cols=47 Identities=23% Similarity=0.111 Sum_probs=33.5
Q ss_pred HHHHHHHHHcCCCEEEEeCCC---CCHHHHHHHHHHHhhcCCCccceeec
Q 019951 279 AAIIRKLKDVGLHGLEVYRSD---GKLVGVIFTLQDGSLFSLLPLTVLFG 325 (333)
Q Consensus 279 ~~li~~l~~~GlDGIEv~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~ 325 (333)
.+.++.++++|++|||++... ........+.+.++++||.+..+-++
T Consensus 32 ~~~l~~~a~~G~~~VEl~~~~~~~~~~~~~~~~~~~l~~~GL~v~~~~~~ 81 (303)
T 3l23_A 32 AANLRKVKDMGYSKLELAGYGKGAIGGVPMMDFKKMAEDAGLKIISSHVN 81 (303)
T ss_dssp HHHHHHHHHTTCCEEEECCEETTEETTEEHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHcCCCEEEeccccCcccCCCCHHHHHHHHHHcCCeEEEEecc
Confidence 678889999999999998511 11234577788889999976555443
No 67
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=59.01 E-value=6.1 Score=35.27 Aligned_cols=60 Identities=10% Similarity=0.154 Sum_probs=41.2
Q ss_pred eEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCEEEEEE
Q 019951 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGV 134 (333)
Q Consensus 73 ~~~DLH~HT~~SDG~~sp~eli~~A~~~Gl~~laITDHdt~~g~~~~~~~a~~~gi~~i~Gi 134 (333)
-.+|-|||-.+.+-..+++++++.+.+.|++.+.++-. +......+.+.+++.+- +++++
T Consensus 12 ~~~~~~~hl~~~~~~~~~~~~l~~~~~~GV~~~v~~~~-~~~~~~~~~~l~~~~p~-i~~~~ 71 (268)
T 1j6o_A 12 HMVDTHAHLHFHQFDDDRNAVISSFEENNIEFVVNVGV-NLEDSKKSLDLSKTSDR-IFCSV 71 (268)
T ss_dssp CEEEEEECTTSGGGTTTHHHHHHTTTTTTEEEEEEECS-SHHHHHHHHHHHTTCTT-EEEEE
T ss_pred cccccccCCCChhhccCHHHHHHHHHHcCCCEEEEeCC-CHHHHHHHHHHHHHCCC-EEEEE
Confidence 56799999998877789999999999999987666432 12223344555655542 44443
No 68
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=58.97 E-value=18 Score=31.67 Aligned_cols=43 Identities=2% Similarity=-0.031 Sum_probs=32.8
Q ss_pred CcHHHHHHHHHcCCCEEEEeCCC--------CCHHHHHHHHHHHhhcCCCc
Q 019951 277 NPAAIIRKLKDVGLHGLEVYRSD--------GKLVGVIFTLQDGSLFSLLP 319 (333)
Q Consensus 277 ~~~~li~~l~~~GlDGIEv~~~~--------~~~~~~~~~~~~a~~~~l~~ 319 (333)
...+.++.+.++|+||||++... .+......+.+.++++||.+
T Consensus 13 ~l~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~ 63 (285)
T 1qtw_A 13 GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 (285)
T ss_dssp CHHHHHHHHHHTTCSEEECCSSCSSCSSCCCCCHHHHHHHHHHHHHTTCCG
T ss_pred CHHHHHHHHHHcCCCEEEeeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 34678899999999999996321 23466788889999999864
No 69
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=58.04 E-value=3.7 Score=38.92 Aligned_cols=70 Identities=11% Similarity=0.062 Sum_probs=48.4
Q ss_pred CCHHHHHHHHH-Hh---C--CEEEEeCCCCCCCcHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHH--HHHhhcCCCccce
Q 019951 251 PLAEVAVQLIH-RT---G--GLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVGVIFTL--QDGSLFSLLPLTV 322 (333)
Q Consensus 251 ~~~eevI~~I~-~a---G--GvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~--~~a~~~~l~~~~~ 322 (333)
|...++++.|+ +. | |++++-|.+.. ..+++.+.+.|+|.|-+-+ ..++.+..... +.+-..|++| .+
T Consensus 235 p~~k~i~~~i~~~~~~~g~~~~p~i~~~~G~---~~~l~~l~~~g~d~i~~d~-~~dl~~a~~~~g~~~~l~Gnldp-~~ 309 (367)
T 1r3s_A 235 PYIRDVAKQVKARLREAGLAPVPMIIFAKDG---HFALEELAQAGYEVVGLDW-TVAPKKARECVGKTVTLQGNLDP-CA 309 (367)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCCEEEEETTC---GGGHHHHTTSSCSEEECCT-TSCHHHHHHHHCSSSEEEEEECG-GG
T ss_pred HHHHHHHHHHhhhhccccCCCCCeEEEcCCc---HHHHHHHHhcCCCEEEeCC-CCCHHHHHHHcCCCeEEEeCCCh-HH
Confidence 45678899998 77 6 78899998643 3578899999999887643 34555543322 2455678877 45
Q ss_pred eec
Q 019951 323 LFG 325 (333)
Q Consensus 323 ~~~ 325 (333)
++|
T Consensus 310 L~g 312 (367)
T 1r3s_A 310 LYA 312 (367)
T ss_dssp GGS
T ss_pred hcC
Confidence 565
No 70
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=57.83 E-value=14 Score=35.19 Aligned_cols=23 Identities=17% Similarity=0.109 Sum_probs=17.3
Q ss_pred HHHHHHHHHHhCCEEE--EeCCCCC
Q 019951 253 AEVAVQLIHRTGGLAV--LAHPWAL 275 (333)
Q Consensus 253 ~eevI~~I~~aGGvaV--LAHP~~~ 275 (333)
...+++++|+.|+.++ |.|++|.
T Consensus 83 ~~~l~~~vh~~g~~i~~QL~H~Gr~ 107 (364)
T 1vyr_A 83 WKKITAGVHAEDGRIAVQLWHTGRI 107 (364)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCTTS
T ss_pred HHHHHHHHHhcCCeEEEEeccCCcc
Confidence 5678889999998744 8886653
No 71
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=56.75 E-value=17 Score=32.23 Aligned_cols=43 Identities=12% Similarity=0.013 Sum_probs=35.7
Q ss_pred CCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCEE
Q 019951 88 LSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKI 130 (333)
Q Consensus 88 ~sp~eli~~A~~~Gl~~laITDHdt~~g~~~~~~~a~~~gi~~ 130 (333)
.++++.++.+++.|++.|-|.-.+.-....++.+.+++.|+.+
T Consensus 38 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gl~v 80 (287)
T 3kws_A 38 ESLNEKLDFMEKLGVVGFEPGGGGLAGRVNEIKQALNGRNIKV 80 (287)
T ss_dssp SSHHHHHHHHHHTTCCEEECBSTTCGGGHHHHHHHHTTSSCEE
T ss_pred CCHHHHHHHHHHcCCCEEEecCCchHHHHHHHHHHHHHcCCeE
Confidence 6999999999999999999988754445667777888889875
No 72
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=56.51 E-value=19 Score=34.37 Aligned_cols=22 Identities=27% Similarity=0.262 Sum_probs=17.0
Q ss_pred HHHHHHHHHHhCCEEE--EeCCCC
Q 019951 253 AEVAVQLIHRTGGLAV--LAHPWA 274 (333)
Q Consensus 253 ~eevI~~I~~aGGvaV--LAHP~~ 274 (333)
...+++++|+.|+.++ |.|++|
T Consensus 87 ~k~l~~avh~~G~~i~~QL~H~Gr 110 (377)
T 2r14_A 87 WKGVVEAVHAKGGRIALQLWHVGR 110 (377)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCTT
T ss_pred HHHHHHHHhhcCCeEEEEccCCcc
Confidence 5678889999999744 888664
No 73
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=55.47 E-value=10 Score=33.32 Aligned_cols=55 Identities=18% Similarity=0.233 Sum_probs=39.6
Q ss_pred CEEEEe-C--CC---CCCCcHHHHHHHHHcCCCEEEEeCC--CCCHHHHHHHHHHHhhcCCCcc
Q 019951 265 GLAVLA-H--PW---ALKNPAAIIRKLKDVGLHGLEVYRS--DGKLVGVIFTLQDGSLFSLLPL 320 (333)
Q Consensus 265 GvaVLA-H--P~---~~~~~~~li~~l~~~GlDGIEv~~~--~~~~~~~~~~~~~a~~~~l~~~ 320 (333)
.++|+| + +. .|.. +-.+.++.++|.|+|-+-++ ..+..+.....+.|+++|+.|.
T Consensus 53 ~~~v~aqd~~~~~~ga~tG-ei~~~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~Gl~~i 115 (219)
T 2h6r_A 53 NIPVYAQHIDNINPGSHTG-HILAEAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNLGLETI 115 (219)
T ss_dssp CSCBEESCCCSCCSBSCTT-CCCHHHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHTCEEE
T ss_pred CCcEEEEECChhhcCCccC-chHHHHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHCCCeEE
Confidence 688888 2 22 2211 22367888999999999887 4667778888899999998554
No 74
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=55.19 E-value=7.7 Score=33.94 Aligned_cols=67 Identities=4% Similarity=0.026 Sum_probs=37.8
Q ss_pred CCHHHHHHHHHHhC--CEEEE-eC-C--C-CCCCcHHHHHHHHHcCCCEEEEeCCC----CCH-------HHHHHHHHHH
Q 019951 251 PLAEVAVQLIHRTG--GLAVL-AH-P--W-ALKNPAAIIRKLKDVGLHGLEVYRSD----GKL-------VGVIFTLQDG 312 (333)
Q Consensus 251 ~~~eevI~~I~~aG--GvaVL-AH-P--~-~~~~~~~li~~l~~~GlDGIEv~~~~----~~~-------~~~~~~~~~a 312 (333)
.+.+++++.++++| ||-+. .. + + ......++.+.+.+.||.-.-+..+. .++ +.+..+.++|
T Consensus 14 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a 93 (278)
T 1i60_A 14 SNLKLDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKPLALNALVFFNNRDEKGHNEIITEFKGMMETC 93 (278)
T ss_dssp CCHHHHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCCCeeeeccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 56888999999887 44443 21 1 0 11223456667778887632222211 122 2336778888
Q ss_pred hhcCC
Q 019951 313 SLFSL 317 (333)
Q Consensus 313 ~~~~l 317 (333)
..+|-
T Consensus 94 ~~lG~ 98 (278)
T 1i60_A 94 KTLGV 98 (278)
T ss_dssp HHHTC
T ss_pred HHcCC
Confidence 88885
No 75
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=55.16 E-value=11 Score=36.66 Aligned_cols=54 Identities=22% Similarity=0.182 Sum_probs=40.8
Q ss_pred ceEEceeeeCcCC--CC--------CCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhC
Q 019951 72 NVVFELHSHSNFS--DG--------YLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRF 126 (333)
Q Consensus 72 ~~~~DLH~HT~~S--DG--------~~sp~eli~~A~~~Gl~~laITDHdt~~g~~~~~~~a~~~ 126 (333)
...+|.|||-+.+ +| .-..++++++|.+.|++.+.+|= .++..+..+.+.|+++
T Consensus 12 ~~~iDih~nL~d~~f~g~y~~~~~h~~D~~~vl~rA~~~GV~~ii~~g-~~l~~s~~~~~La~~~ 75 (401)
T 3e2v_A 12 LKYYDIGLNLTDPMFHGIYNGKQYHPADYVKLLERAAQRHVKNALVTG-SSIAESQSAIELVSSV 75 (401)
T ss_dssp CCEEEEEECTTSGGGGTEETTEECSCCCHHHHHHHHHHTTEEEEEECC-CSHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCcCcHHHhhhccccccCccCHHHHHHHHHHCCCCEEEEec-CCHHHHHHHHHHHHHC
Confidence 3689999999876 44 25899999999999999998883 2333455666777664
No 76
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=54.48 E-value=25 Score=33.14 Aligned_cols=45 Identities=20% Similarity=0.127 Sum_probs=33.9
Q ss_pred cHHHHHHHHHcCCCEEEEe----CCCCC-----HHHHHHHHHHHhhcCCCccce
Q 019951 278 PAAIIRKLKDVGLHGLEVY----RSDGK-----LVGVIFTLQDGSLFSLLPLTV 322 (333)
Q Consensus 278 ~~~li~~l~~~GlDGIEv~----~~~~~-----~~~~~~~~~~a~~~~l~~~~~ 322 (333)
..+.++.+.++|++|||++ .+... ......+.+.++++||....+
T Consensus 35 ~~e~l~~aa~~G~~~vEl~~~~~~p~~~~~~e~~~~~~~l~~~l~~~GL~i~~~ 88 (387)
T 1bxb_A 35 PVYVVHKLAELGAYGVNLHDEDLIPRGTPPQERDQIVRRFKKALDETGLKVPMV 88 (387)
T ss_dssp HHHHHHHHHHHTCSEEEEEHHHHSCTTCCTTHHHHHHHHHHHHHHHHTCBCCEE
T ss_pred HHHHHHHHHHhCCCEEEecCcccCCCCCChhhhHHHHHHHHHHHHHhCCEEEEE
Confidence 3667888889999999998 66542 456688888999999865444
No 77
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=53.56 E-value=23 Score=33.58 Aligned_cols=45 Identities=18% Similarity=0.101 Sum_probs=33.8
Q ss_pred cHHHHHHHHHcCCCEEEEe----CCCCC-----HHHHHHHHHHHhhcCCCccce
Q 019951 278 PAAIIRKLKDVGLHGLEVY----RSDGK-----LVGVIFTLQDGSLFSLLPLTV 322 (333)
Q Consensus 278 ~~~li~~l~~~GlDGIEv~----~~~~~-----~~~~~~~~~~a~~~~l~~~~~ 322 (333)
..+.++.+.++|++|||++ .+... ......+.+.++++||....+
T Consensus 35 ~~e~l~~aa~~G~~~VEl~~~~l~p~~~~~~~~~~~~~~l~~~l~~~GL~i~~~ 88 (393)
T 1xim_A 35 PVEAVHKLAEIGAYGITFHDDDLVPFGSDAQTRDGIIAGFKKALDETGLIVPMV 88 (393)
T ss_dssp HHHHHHHHHHHTCSEEECBHHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBCCEE
T ss_pred HHHHHHHHHHhCCCEEEeecccCCCccccccccHHHHHHHHHHHHHhCCEEEEE
Confidence 3667888889999999998 66543 456678888999999865433
No 78
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=53.41 E-value=22 Score=31.26 Aligned_cols=35 Identities=17% Similarity=0.220 Sum_probs=29.1
Q ss_pred eEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCC
Q 019951 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDT 112 (333)
Q Consensus 73 ~~~DLH~HT~~SDG~~sp~eli~~A~~~Gl~~laITDHdt 112 (333)
|.+|.|+|... .++++++.+.+.|++...+.-...
T Consensus 3 m~iD~H~Hl~~-----~~~~~l~~m~~~Gv~~~v~~~~~~ 37 (272)
T 3cjp_A 3 LIIDGHTHVIL-----PVEKHIKIMDEAGVDKTILFSTSI 37 (272)
T ss_dssp CCEEEEEECCS-----SHHHHHHHHHHHTCCEEEEECCSC
T ss_pred eEEEehhhcCC-----CHHHHHHHHHHcCCCEEEEeCCCC
Confidence 67999999865 369999999999999988876543
No 79
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=53.40 E-value=20 Score=31.34 Aligned_cols=13 Identities=23% Similarity=0.020 Sum_probs=8.3
Q ss_pred CHHHHHHHHHHhC
Q 019951 252 LAEVAVQLIHRTG 264 (333)
Q Consensus 252 ~~eevI~~I~~aG 264 (333)
+.+++++.+++.|
T Consensus 15 ~~~~~~~~~~~~G 27 (270)
T 3aam_A 15 GVAGAVEEATALG 27 (270)
T ss_dssp HHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHcC
Confidence 3566677776664
No 80
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=53.15 E-value=21 Score=31.58 Aligned_cols=44 Identities=5% Similarity=-0.057 Sum_probs=35.5
Q ss_pred HHHHHHHHHcCCCEEEEeCCC---CCHHHHHHHHHHHhhcCCCccce
Q 019951 279 AAIIRKLKDVGLHGLEVYRSD---GKLVGVIFTLQDGSLFSLLPLTV 322 (333)
Q Consensus 279 ~~li~~l~~~GlDGIEv~~~~---~~~~~~~~~~~~a~~~~l~~~~~ 322 (333)
.+.++.++++|++|||++... .+.+....+.+..+++||....+
T Consensus 24 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~ 70 (290)
T 3tva_A 24 GVHLEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTVI 70 (290)
T ss_dssp SBCHHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEEE
Confidence 457889999999999999754 24666788999999999966555
No 81
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=52.95 E-value=7.5 Score=36.79 Aligned_cols=29 Identities=38% Similarity=0.545 Sum_probs=26.4
Q ss_pred ceEEceeeeCcCCCCCCCHHHHHHHHHHcCCc
Q 019951 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVK 103 (333)
Q Consensus 72 ~~~~DLH~HT~~SDG~~sp~eli~~A~~~Gl~ 103 (333)
..+++||+|- ||+++|+.+.+.|+++|++
T Consensus 13 lPK~ELH~Hl---~Gsl~p~tl~~la~~~~~~ 41 (343)
T 3rys_A 13 PPVAELHLHI---EGTLQPELIFALAERNGIE 41 (343)
T ss_dssp CCEEECSBBG---GGGCCHHHHHHHHHHTTCC
T ss_pred CCceeeEecC---ccCCCHHHHHHHHHhcCCC
Confidence 3699999995 8999999999999999986
No 82
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=52.82 E-value=18 Score=37.39 Aligned_cols=22 Identities=27% Similarity=0.193 Sum_probs=17.5
Q ss_pred HHHHHHHHHHhCCEEE--EeCCCC
Q 019951 253 AEVAVQLIHRTGGLAV--LAHPWA 274 (333)
Q Consensus 253 ~eevI~~I~~aGGvaV--LAHP~~ 274 (333)
...+++++|+.|+.++ |.|+++
T Consensus 86 ~~~~~~~vh~~g~~i~~Ql~h~Gr 109 (729)
T 1o94_A 86 LKAMTDEVHKYGALAGVELWYGGA 109 (729)
T ss_dssp HHHHHHHHHTTTCEEEEEEECCGG
T ss_pred HHHHHHHHHhCCCeEEEEecCCCc
Confidence 5678899999999755 899654
No 83
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=52.42 E-value=4.1 Score=38.23 Aligned_cols=70 Identities=10% Similarity=0.062 Sum_probs=47.6
Q ss_pred CCHHHHHHHHHHhC---CEEEEeCCCCCCCcHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHH--HHHhhcCCCccceeec
Q 019951 251 PLAEVAVQLIHRTG---GLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVGVIFTL--QDGSLFSLLPLTVLFG 325 (333)
Q Consensus 251 ~~~eevI~~I~~aG---GvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~--~~a~~~~l~~~~~~~~ 325 (333)
|...++++.|++.| |++++-|.+.. ..+++.+.+.|+|.|-+-. ..++.+..... +.+-..|+.|. +++|
T Consensus 225 p~~k~i~~~i~~~~~~~~~~ii~~~~g~---~~~l~~l~~~g~d~i~~d~-~~dl~~~~~~~g~~~~l~Gn~dp~-~l~~ 299 (354)
T 3cyv_A 225 YYMHKIVDGLLRENDGRRVPVTLFTKGG---GQWLEAMAETGCDALGLDW-TTDIADARRRVGNKVALQGNMDPS-MLYA 299 (354)
T ss_dssp HHHHHHHHHSCSEETTEECCEEEECTTT---TTTHHHHHTTSCSEEECCT-TSCHHHHHHHHTTTSEEECCBCGG-GGGS
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEECCCH---HHHHHHHHhcCCCEEEeCC-CCCHHHHHHHhCCCeEEEecCChH-HhCC
Confidence 45678999999886 78888887643 3578899999999998633 45555553322 24556787774 4455
No 84
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=52.40 E-value=22 Score=32.37 Aligned_cols=39 Identities=23% Similarity=0.100 Sum_probs=31.1
Q ss_pred HHHHHHHHcCCCEEEEeCCCCCH-------HHHHHHHHHHhhcCCC
Q 019951 280 AIIRKLKDVGLHGLEVYRSDGKL-------VGVIFTLQDGSLFSLL 318 (333)
Q Consensus 280 ~li~~l~~~GlDGIEv~~~~~~~-------~~~~~~~~~a~~~~l~ 318 (333)
+.++.++++|++|||+....... .....+.+..+++||.
T Consensus 35 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~l~~~gL~ 80 (335)
T 2qw5_A 35 AHIKKLQRFGYSGFEFPIAPGLPENYAQDLENYTNLRHYLDSEGLE 80 (335)
T ss_dssp HHHHHHHHTTCCEEEEECCCCCGGGHHHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHhCCCEEEEecCCCcccccccchHHHHHHHHHHHHCCCC
Confidence 68899999999999998653321 5567888899999997
No 85
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=52.23 E-value=27 Score=29.60 Aligned_cols=44 Identities=11% Similarity=0.088 Sum_probs=22.4
Q ss_pred HHHHHHHHHHhCCEEEEeCCCCCCC-cHHHHHHHHHcCCC-EEEEe
Q 019951 253 AEVAVQLIHRTGGLAVLAHPWALKN-PAAIIRKLKDVGLH-GLEVY 296 (333)
Q Consensus 253 ~eevI~~I~~aGGvaVLAHP~~~~~-~~~li~~l~~~GlD-GIEv~ 296 (333)
.+..++.+.++|.-.|.-|+..... ....++.+.+.|+. |+.+.
T Consensus 66 ~~~~~~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~~gv~~~ 111 (207)
T 3ajx_A 66 GELEADIAFKAGADLVTVLGSADDSTIAGAVKAAQAHNKGVVVDLI 111 (207)
T ss_dssp HHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECT
T ss_pred cHHHHHHHHhCCCCEEEEeccCChHHHHHHHHHHHHcCCceEEEEe
Confidence 4455677777776666667654211 12334444444543 34443
No 86
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=50.97 E-value=5.1 Score=35.27 Aligned_cols=67 Identities=15% Similarity=-0.094 Sum_probs=32.9
Q ss_pred CCHHHHHHHHHHhCCEEE--EeC-CCC--C-CCcHHHHHHHHHcCCCEEEEeCCC---CCHH-------HHHHHHHHHhh
Q 019951 251 PLAEVAVQLIHRTGGLAV--LAH-PWA--L-KNPAAIIRKLKDVGLHGLEVYRSD---GKLV-------GVIFTLQDGSL 314 (333)
Q Consensus 251 ~~~eevI~~I~~aGGvaV--LAH-P~~--~-~~~~~li~~l~~~GlDGIEv~~~~---~~~~-------~~~~~~~~a~~ 314 (333)
.+++++++.+.++|--.| ... |.. . ....++.+.+.+.||.-.-+..+. .+.. .+..+.++|.+
T Consensus 16 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~ 95 (281)
T 3u0h_A 16 TSLVLYLDLARETGYRYVDVPFHWLEAEAERHGDAAVEAMFQRRGLVLANLGLPLNLYDSEPVFLRELSLLPDRARLCAR 95 (281)
T ss_dssp CCHHHHHHHHHHTTCSEECCCHHHHHHHHHHHCHHHHHHHHHTTTCEECCEECCSCTTSCHHHHHHHHHTHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEecHHHHHHHhcccCHHHHHHHHHHcCCceEEecccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 467788888888874333 111 100 0 112345556667776522121111 1111 22456778888
Q ss_pred cCC
Q 019951 315 FSL 317 (333)
Q Consensus 315 ~~l 317 (333)
+|-
T Consensus 96 lG~ 98 (281)
T 3u0h_A 96 LGA 98 (281)
T ss_dssp TTC
T ss_pred cCC
Confidence 875
No 87
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=50.86 E-value=35 Score=31.49 Aligned_cols=66 Identities=12% Similarity=-0.039 Sum_probs=48.3
Q ss_pred HHHHHHHHHHhCCEEEEeCCC-----CCCCcHHHHHHHHHcCCCEEEEeCCC--CCHHHHHHHHHHHhhcCCCc
Q 019951 253 AEVAVQLIHRTGGLAVLAHPW-----ALKNPAAIIRKLKDVGLHGLEVYRSD--GKLVGVIFTLQDGSLFSLLP 319 (333)
Q Consensus 253 ~eevI~~I~~aGGvaVLAHP~-----~~~~~~~li~~l~~~GlDGIEv~~~~--~~~~~~~~~~~~a~~~~l~~ 319 (333)
+++.|++.|++|--+..-..+ ....-++.++++.++|++.||+.... -+.++...+.+.|+.. |.+
T Consensus 82 l~ekI~l~~~~gV~v~~GGTlfE~~l~qg~~~~yl~~~k~lGF~~IEISdGti~l~~~~~~~lI~~a~~~-f~V 154 (276)
T 1u83_A 82 LEEKISTLKEHDITFFFGGTLFEKYVSQKKVNEFHRYCTYFGCEYIEISNGTLPMTNKEKAAYIADFSDE-FLV 154 (276)
T ss_dssp HHHHHHHHHHTTCEEEECHHHHHHHHHTTCHHHHHHHHHHTTCSEEEECCSSSCCCHHHHHHHHHHHTTT-SEE
T ss_pred HHHHHHHHHHcCCeEeCCcHHHHHHHHcCcHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHhh-cEE
Confidence 999999999998544433211 11233788999999999999999875 4677777788888777 633
No 88
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=50.67 E-value=51 Score=30.35 Aligned_cols=63 Identities=11% Similarity=0.039 Sum_probs=42.4
Q ss_pred HHHHHHHHh--CCEEEEeCCCCCCC--cHHHHHHHHHcCCCEEEEeCCCC-----CHHHH-HHHHHHHhhcCC
Q 019951 255 VAVQLIHRT--GGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG-----KLVGV-IFTLQDGSLFSL 317 (333)
Q Consensus 255 evI~~I~~a--GGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~-----~~~~~-~~~~~~a~~~~l 317 (333)
++++.+.++ |.++|+|+-+.... ..++.+.+.+.|.||+=+..|+. +.++. .++.+.|..-++
T Consensus 71 ~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~~l 143 (307)
T 3s5o_A 71 EVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPI 143 (307)
T ss_dssp HHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhcCC
Confidence 355555554 66899998775432 24566788899999999987754 33344 667777777664
No 89
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=50.61 E-value=14 Score=37.66 Aligned_cols=23 Identities=17% Similarity=0.312 Sum_probs=18.1
Q ss_pred CHHHHHHHHHHhCCEEE--EeCCCC
Q 019951 252 LAEVAVQLIHRTGGLAV--LAHPWA 274 (333)
Q Consensus 252 ~~eevI~~I~~aGGvaV--LAHP~~ 274 (333)
....+++++|+.|+.++ |.|++|
T Consensus 82 ~~~~~~~~vh~~g~~i~~Ql~h~Gr 106 (671)
T 1ps9_A 82 HHRTITEAVHQEGGKIALQILHTGR 106 (671)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCGG
T ss_pred HHHHHHHHHHhcCCEEEEEeccCCc
Confidence 35678899999999754 899765
No 90
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=50.54 E-value=36 Score=31.45 Aligned_cols=62 Identities=11% Similarity=0.071 Sum_probs=41.2
Q ss_pred HHHHHHH--hCCEEEEeCCCCCCC--cHHHHHHHHHcCCCEEEEeCCCC------CHHHH-HHHHHHHhhcCC
Q 019951 256 AVQLIHR--TGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG------KLVGV-IFTLQDGSLFSL 317 (333)
Q Consensus 256 vI~~I~~--aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~------~~~~~-~~~~~~a~~~~l 317 (333)
+++.+.+ .|.++|+|+-+.... ..++.+.+.+.|.||+=+..|+. +.++. .++.+.|..-++
T Consensus 66 v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~l 138 (309)
T 3fkr_A 66 LTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAI 138 (309)
T ss_dssp HHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcCC
Confidence 4444433 356899998775432 24566788889999999987764 34444 666778877664
No 91
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=50.51 E-value=16 Score=33.27 Aligned_cols=66 Identities=8% Similarity=-0.036 Sum_probs=36.7
Q ss_pred CHHHHHHHHHHhCCEE--EEeC---C---CCC--C-----CcHHHHHHHHHcCCCEEEEeCCCC----CH---HH----H
Q 019951 252 LAEVAVQLIHRTGGLA--VLAH---P---WAL--K-----NPAAIIRKLKDVGLHGLEVYRSDG----KL---VG----V 305 (333)
Q Consensus 252 ~~eevI~~I~~aGGva--VLAH---P---~~~--~-----~~~~li~~l~~~GlDGIEv~~~~~----~~---~~----~ 305 (333)
+++++++.++++|--. +... . +.+ . ...++-+.+.+.||.-+-+..+.. ++ +. +
T Consensus 37 ~l~~~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~GL~i~~~~~~~~~~~~~~~~~~~~~~~~ 116 (305)
T 3obe_A 37 DMPNGLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDDAGLRISSSHLTPSLREYTKENMPKFDEFW 116 (305)
T ss_dssp THHHHHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHHTTCEEEEEBCCCSCCCCCGGGHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHHCCCeEEEeeccccccccchhhHHHHHHHH
Confidence 5788888888887433 3322 1 111 0 224555677788887433443431 11 21 1
Q ss_pred HHHHHHHhhcCC
Q 019951 306 IFTLQDGSLFSL 317 (333)
Q Consensus 306 ~~~~~~a~~~~l 317 (333)
..+.++|..+|-
T Consensus 117 ~~~i~~A~~lG~ 128 (305)
T 3obe_A 117 KKATDIHAELGV 128 (305)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHcCC
Confidence 556778888885
No 92
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=50.38 E-value=12 Score=33.26 Aligned_cols=61 Identities=10% Similarity=0.072 Sum_probs=40.9
Q ss_pred HHHHHHHHhCCEEEEeCCCCCCCcHHHHHHHHHcCCCEEEEeCCC-CCHHHHHHHHHHHhhcCCC
Q 019951 255 VAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSD-GKLVGVIFTLQDGSLFSLL 318 (333)
Q Consensus 255 evI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~-~~~~~~~~~~~~a~~~~l~ 318 (333)
.+|+.|++.=..++.+|-.-. ++..+++.+.++|.|+|-+..-. . .....+.+.++++|..
T Consensus 47 ~~v~~lr~~~~~~~dvhLmv~-dp~~~i~~~~~aGAd~itvh~Ea~~--~~~~~~i~~i~~~G~k 108 (231)
T 3ctl_A 47 FFVSQVKKLATKPLDCHLMVT-RPQDYIAQLARAGADFITLHPETIN--GQAFRLIDEIRRHDMK 108 (231)
T ss_dssp HHHHHHHTTCCSCEEEEEESS-CGGGTHHHHHHHTCSEEEECGGGCT--TTHHHHHHHHHHTTCE
T ss_pred HHHHHHHhccCCcEEEEEEec-CHHHHHHHHHHcCCCEEEECcccCC--ccHHHHHHHHHHcCCe
Confidence 577888776556778886543 35556788888888888776543 2 2356667777777653
No 93
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=50.15 E-value=44 Score=29.22 Aligned_cols=51 Identities=4% Similarity=-0.141 Sum_probs=39.7
Q ss_pred eCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCEEE
Q 019951 80 HSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKII 131 (333)
Q Consensus 80 HT~~SDG~~sp~eli~~A~~~Gl~~laITDHdt~~g~~~~~~~a~~~gi~~i 131 (333)
-+++.-+.+++++.++.+++.|++.|-|..-.. ....++.+.+++.|+++.
T Consensus 15 ~~~~~f~~~~~~~~l~~~~~~G~~~vEl~~~~~-~~~~~~~~~l~~~gl~~~ 65 (269)
T 3ngf_A 15 NLSTMFNEVPFLERFRLAAEAGFGGVEFLFPYD-FDADVIARELKQHNLTQV 65 (269)
T ss_dssp ETTTSCTTSCHHHHHHHHHHTTCSEEECSCCTT-SCHHHHHHHHHHTTCEEE
T ss_pred echhhhccCCHHHHHHHHHHcCCCEEEecCCcc-CCHHHHHHHHHHcCCcEE
Confidence 344446779999999999999999999975322 246778888888999764
No 94
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=49.35 E-value=9.5 Score=33.16 Aligned_cols=43 Identities=7% Similarity=-0.048 Sum_probs=32.4
Q ss_pred cHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHhhcCCCccce
Q 019951 278 PAAIIRKLKDVGLHGLEVYRSDGKLVGVIFTLQDGSLFSLLPLTV 322 (333)
Q Consensus 278 ~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~~~a~~~~l~~~~~ 322 (333)
..+.++.+.++|++|||++.+.. .....+.+.++++||....+
T Consensus 17 ~~~~l~~~~~~G~~~vEl~~~~~--~~~~~~~~~l~~~gl~~~~~ 59 (260)
T 1k77_A 17 FIERFAAARKAGFDAVEFLFPYN--YSTLQIQKQLEQNHLTLALF 59 (260)
T ss_dssp GGGHHHHHHHHTCSEEECSCCTT--SCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhCCCEEEecCCCC--CCHHHHHHHHHHcCCceEEE
Confidence 35678889999999999987643 23567788889999865543
No 95
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=49.13 E-value=8.4 Score=36.87 Aligned_cols=30 Identities=27% Similarity=0.495 Sum_probs=26.6
Q ss_pred ceEEceeeeCcCCCCCCCHHHHHHHHHHcCCcE
Q 019951 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKV 104 (333)
Q Consensus 72 ~~~~DLH~HT~~SDG~~sp~eli~~A~~~Gl~~ 104 (333)
..+++||+|- ||+++|+.+.+.|+++|++.
T Consensus 6 lPK~ELH~HL---~Gsl~p~tl~~La~~~~~~l 35 (367)
T 3iar_A 6 KPKVELHVHL---DGSIKPETILYYGRRRGIAL 35 (367)
T ss_dssp SCEEECCBBG---GGSCCHHHHHHHHHHHTCCC
T ss_pred CCeeEeeecc---cCCCCHHHHHHHHHhcCCCC
Confidence 3689999995 89999999999999999863
No 96
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=48.39 E-value=39 Score=30.27 Aligned_cols=48 Identities=8% Similarity=-0.051 Sum_probs=29.3
Q ss_pred HHHHHHHHHhCCEEEEeC--CCCCC--CcHHHHHHHHHcCCCEEEEeCCCCC
Q 019951 254 EVAVQLIHRTGGLAVLAH--PWALK--NPAAIIRKLKDVGLHGLEVYRSDGK 301 (333)
Q Consensus 254 eevI~~I~~aGGvaVLAH--P~~~~--~~~~li~~l~~~GlDGIEv~~~~~~ 301 (333)
+++.+..++.|-.+++.| ++... ...++++.|.+.|+|+||+-.|..+
T Consensus 5 ~~~f~~~~~~~~~~~i~~i~~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sd 56 (262)
T 2ekc_A 5 SDKFTELKEKREKALVSYLMVGYPDYETSLKAFKEVLKNGTDILEIGFPFSD 56 (262)
T ss_dssp HHHHHHHHHHTBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSEEEEECCCSC
T ss_pred HHHHHHHHhcCCceEEEEecCCCCChHHHHHHHHHHHHcCCCEEEECCCCCC
Confidence 344555555554444444 33222 1245778889999999999887643
No 97
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=48.24 E-value=8.8 Score=36.01 Aligned_cols=29 Identities=34% Similarity=0.423 Sum_probs=26.1
Q ss_pred eEEceeeeCcCCCCCCCHHHHHHHHHHcCCcE
Q 019951 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKV 104 (333)
Q Consensus 73 ~~~DLH~HT~~SDG~~sp~eli~~A~~~Gl~~ 104 (333)
.+++||+|- ||+++|+.+.+.|+++|++.
T Consensus 11 PK~ELH~Hl---~Gsl~~~t~~~la~~~~~~l 39 (326)
T 3pao_A 11 PKAELHLHL---EGTLEPELLFALAERNRIAL 39 (326)
T ss_dssp CEEECSBBG---GGGCCHHHHHHHHHHTTCCC
T ss_pred CceEEEecc---cCCCCHHHHHHHHHhcCCCC
Confidence 589999995 89999999999999999863
No 98
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=47.70 E-value=17 Score=32.84 Aligned_cols=37 Identities=8% Similarity=0.005 Sum_probs=30.4
Q ss_pred ceEEceeeeCcCCC------------CCCCHHHHHHHHHHcCCcEEEEe
Q 019951 72 NVVFELHSHSNFSD------------GYLSPSKLVERAHCNGVKVLALT 108 (333)
Q Consensus 72 ~~~~DLH~HT~~SD------------G~~sp~eli~~A~~~Gl~~laIT 108 (333)
.+.+|-|+|-...+ ...+++++++.+.+.|++.+.+.
T Consensus 25 ~~~iDtH~Hl~~~~~p~~~~~~~~p~~~~~~e~~l~~~~~~GV~~~V~v 73 (294)
T 4i6k_A 25 MNCIDTHAHVFSTQDHSIETARYAPDYEATVQSFISHLDEHNFTHGVLV 73 (294)
T ss_dssp CCSEEEEECCBCTTSCCCTTCSCCCCSCBCHHHHHHHHHHTTCCEEEEE
T ss_pred CCceEeeeEeecCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCeEEEe
Confidence 47899999986431 14689999999999999988887
No 99
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=46.78 E-value=26 Score=32.19 Aligned_cols=62 Identities=19% Similarity=0.162 Sum_probs=31.7
Q ss_pred HHHHHHHHHHhCCEEEEeCCCCCCCcHHHHHHHHHcCCCEEEEe------------CCCCCHHHHHHHHHHHhhcCC
Q 019951 253 AEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVY------------RSDGKLVGVIFTLQDGSLFSL 317 (333)
Q Consensus 253 ~eevI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~------------~~~~~~~~~~~~~~~a~~~~l 317 (333)
+.++++.|++. |+.|-..++.. ..+.++.|.+.|++.+-+. ++.++.++...+.+.+++.|+
T Consensus 119 ~~~li~~i~~~-~~~i~~s~g~l--~~e~l~~L~~ag~~~v~i~let~~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi 192 (348)
T 3iix_A 119 ISDIVKEIKKM-GVAVTLSLGEW--PREYYEKWKEAGADRYLLRHETANPVLHRKLRPDTSFENRLNCLLTLKELGY 192 (348)
T ss_dssp HHHHHHHHHTT-SCEEEEECCCC--CHHHHHHHHHHTCCEEECCCBCSCHHHHHHHSTTSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhc-CceEEEecCCC--CHHHHHHHHHhCCCEEeeeeeeCCHHHHHHhCCCcCHHHHHHHHHHHHHhCC
Confidence 44556666655 45555454432 2455666666666554321 122344444555556666665
No 100
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=46.72 E-value=30 Score=29.94 Aligned_cols=16 Identities=19% Similarity=0.181 Sum_probs=7.2
Q ss_pred HHHHHHHcCCCEEEEe
Q 019951 281 IIRKLKDVGLHGLEVY 296 (333)
Q Consensus 281 li~~l~~~GlDGIEv~ 296 (333)
.++.+.++|.|+|-+.
T Consensus 75 ~~~~~~~aGad~i~vh 90 (218)
T 3jr2_A 75 LSRMAFEAGADWITVS 90 (218)
T ss_dssp HHHHHHHHTCSEEEEE
T ss_pred HHHHHHhcCCCEEEEe
Confidence 3444444444444433
No 101
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=46.38 E-value=28 Score=31.20 Aligned_cols=40 Identities=10% Similarity=0.037 Sum_probs=25.3
Q ss_pred HHHHHHHHHcCCCEEEEeCCC--------CCHHHHHHHHHHHhhcCCC
Q 019951 279 AAIIRKLKDVGLHGLEVYRSD--------GKLVGVIFTLQDGSLFSLL 318 (333)
Q Consensus 279 ~~li~~l~~~GlDGIEv~~~~--------~~~~~~~~~~~~a~~~~l~ 318 (333)
.+.++.+.++|+||||++... .+......+.+.++++||.
T Consensus 21 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 68 (303)
T 3aal_A 21 LAASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAHGIE 68 (303)
T ss_dssp HHHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHcCCc
Confidence 566777777788888875221 1134556677777777763
No 102
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=45.85 E-value=39 Score=27.14 Aligned_cols=43 Identities=16% Similarity=0.227 Sum_probs=36.0
Q ss_pred CCCCCCHHHHHHHHHHHHHhccCCCCCCCCCCCccccccccccccCCceEEceeeeCcCCCCCCCHHHHHHHHHHcCCc
Q 019951 25 GKKKMTAEQSLAFNSVTEWVYLDQSHSSSSSEDDFGVHQILNRAVDNNVVFELHSHSNFSDGYLSPSKLVERAHCNGVK 103 (333)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DLH~HT~~SDG~~sp~eli~~A~~~Gl~ 103 (333)
++.++|.+|...|+.+++-++.+ .||.++.++|.......|..
T Consensus 6 ~~~~Lt~~qi~elk~~F~~~D~d------------------------------------~dG~I~~~El~~~l~~lg~~ 48 (153)
T 3i5g_B 6 RRVKLSQRQMQELKEAFTMIDQD------------------------------------RDGFIGMEDLKDMFSSLGRV 48 (153)
T ss_dssp -CTTCCHHHHHHHHHHHHHHCCS------------------------------------TTSCCCHHHHHHHHHHTTSC
T ss_pred cccCCCHHHHHHHHHHHHHHCCC------------------------------------CCCeEcHHHHHHHHHHcCCC
Confidence 45679999999999999877654 47999999999999988864
No 103
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=45.36 E-value=28 Score=32.51 Aligned_cols=71 Identities=17% Similarity=0.071 Sum_probs=41.6
Q ss_pred HHHHHHHHHHhCCEEEEeCCCCCCCcHHHHHHHHHcCCCEEEEeC-----------CCCCHHHHHHHHHHHhhcCCC-cc
Q 019951 253 AEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYR-----------SDGKLVGVIFTLQDGSLFSLL-PL 320 (333)
Q Consensus 253 ~eevI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~-----------~~~~~~~~~~~~~~a~~~~l~-~~ 320 (333)
+.++++.|++. |+.|...|+.. ..+.++.|+++|+|.|-+.- +.++.++...+.+.+++.|+. -.
T Consensus 136 l~~ll~~ik~~-g~~i~~t~G~l--~~e~l~~L~~aGvd~v~i~les~~e~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~ 212 (369)
T 1r30_A 136 LEQMVQGVKAM-GLEACMTLGTL--SESQAQRLANAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCS 212 (369)
T ss_dssp HHHHHHHHHHT-TSEEEEECSSC--CHHHHHHHHHHCCCEEECCCBSCHHHHHHHCCSSCHHHHHHHHHHHHHHHCEEEC
T ss_pred HHHHHHHHHHc-CCeEEEecCCC--CHHHHHHHHHCCCCEEeecCcCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeeee
Confidence 45666667766 34444566642 35677778888887765321 224556666667777776661 22
Q ss_pred ceeecc
Q 019951 321 TVLFGH 326 (333)
Q Consensus 321 ~~~~~~ 326 (333)
.+.+|.
T Consensus 213 ~~I~Gl 218 (369)
T 1r30_A 213 GGIVGL 218 (369)
T ss_dssp CEEECS
T ss_pred eeEeeC
Confidence 345555
No 104
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=45.24 E-value=28 Score=32.17 Aligned_cols=60 Identities=17% Similarity=0.111 Sum_probs=37.3
Q ss_pred eEEceeeeCcCCCCC------------CCHHH-H---HHHHHHcCCcEEEEecCCC-CCCHHHHHHHHHhCCCEEEE
Q 019951 73 VVFELHSHSNFSDGY------------LSPSK-L---VERAHCNGVKVLALTDHDT-MSGIPEAIETARRFGMKIIP 132 (333)
Q Consensus 73 ~~~DLH~HT~~SDG~------------~sp~e-l---i~~A~~~Gl~~laITDHdt-~~g~~~~~~~a~~~gi~~i~ 132 (333)
-.+|.|+|-.+.-+. -.+++ + +++|++.|+..+...=-+. ...+..+.+.+++.++.++.
T Consensus 16 GliD~H~HL~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~aGV~~iv~~~~~~~~~~~~~~~~la~~~~~~i~~ 92 (330)
T 2ob3_A 16 GFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDIGRDVSLLAEVSRAADVHIVA 92 (330)
T ss_dssp CSEEEEECSEECCTTHHHHCGGGGSCHHHHHHHHHHHHHHHHHTTCCEEEECCCGGGTCCHHHHHHHHHHHTCEEEC
T ss_pred CCceeeeCeecCCchhccCCCchhhhccCHHHHHHHHHHHHHHcCCCEEEeCCCCCcCCCHHHHHHHHHHhCCcEEE
Confidence 468999998873111 12334 3 7889999998864432222 24566677777776765553
No 105
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=45.18 E-value=41 Score=32.57 Aligned_cols=86 Identities=12% Similarity=0.263 Sum_probs=56.4
Q ss_pred hhcCCCCcccCCCCCCHHHHHHHHHHh------CCEEEEeCCCCCCCcHHHHHHHHHcCCCEEEEe----C--------C
Q 019951 237 YLYDGGPAYSTGSEPLAEVAVQLIHRT------GGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVY----R--------S 298 (333)
Q Consensus 237 yl~~~~~~yv~~~~~~~eevI~~I~~a------GGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~----~--------~ 298 (333)
||+.+.|-+.+. ..+.++++.|++. -.+.+-++|.... .+.++.|.++|++-|++- + .
T Consensus 109 ~fgGGtpt~l~~--~~l~~ll~~i~~~~~~~~~~eitie~~p~~l~--~e~l~~L~~~G~~rislGvQS~~~~~l~~i~R 184 (457)
T 1olt_A 109 HWGGGTPTYLNK--AQISRLMKLLRENFQFNADAEISIEVDPREIE--LDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNR 184 (457)
T ss_dssp EEEESCGGGSCH--HHHHHHHHHHHHHSCEEEEEEEEEEECSSSCC--THHHHHHHHTTCCEEEEEEECCCHHHHHHHTC
T ss_pred EEeCCCcccCCH--HHHHHHHHHHHHhCCCCCCcEEEEEEccCcCC--HHHHHHHHHcCCCEEEEeeccCCHHHHHHhCC
Confidence 455444433321 2366788888873 2467788887653 578899999998866653 2 2
Q ss_pred CCCHHHHHHHHHHHhhcCCC-c-cceeecc
Q 019951 299 DGKLVGVIFTLQDGSLFSLL-P-LTVLFGH 326 (333)
Q Consensus 299 ~~~~~~~~~~~~~a~~~~l~-~-~~~~~~~ 326 (333)
.|+.++...+.+.+++.|+. . ..+.+|-
T Consensus 185 ~~~~~~~~~ai~~~r~~G~~~v~~dlI~Gl 214 (457)
T 1olt_A 185 EQDEEFIFALLNHAREIGFTSTNIDLIYGL 214 (457)
T ss_dssp CCCHHHHHHHHHHHHHTTCCSCEEEEEESC
T ss_pred CCCHHHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 36778888889999999984 2 2345564
No 106
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=44.45 E-value=9.4 Score=34.34 Aligned_cols=73 Identities=15% Similarity=0.149 Sum_probs=42.1
Q ss_pred CCHHHHHHHHHHhC--CEEEEeCCC-----CCCCcHHHHHHHHHcCCCEEEEeCCCC-----C------HHHHHHHHHHH
Q 019951 251 PLAEVAVQLIHRTG--GLAVLAHPW-----ALKNPAAIIRKLKDVGLHGLEVYRSDG-----K------LVGVIFTLQDG 312 (333)
Q Consensus 251 ~~~eevI~~I~~aG--GvaVLAHP~-----~~~~~~~li~~l~~~GlDGIEv~~~~~-----~------~~~~~~~~~~a 312 (333)
.+.+++++.++++| ||-+...+. ......++-+.+.+.||. |.+.++.. . .+.+..+.++|
T Consensus 36 ~~~~~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~-i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A 114 (296)
T 2g0w_A 36 VSFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMK-VTEVEYITQWGTAEDRTAEQQKKEQTTFHMA 114 (296)
T ss_dssp SCHHHHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCE-EEEEECBCCCSSTTTCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCc-eEeehhhhccccCChHHHHHHHHHHHHHHHH
Confidence 56889999999997 444433211 011234566677888887 33332211 1 12346778889
Q ss_pred hhcCCCccceeecc
Q 019951 313 SLFSLLPLTVLFGH 326 (333)
Q Consensus 313 ~~~~l~~~~~~~~~ 326 (333)
.++|- ..|.+|-
T Consensus 115 ~~lGa--~~v~~g~ 126 (296)
T 2g0w_A 115 RLFGV--KHINCGL 126 (296)
T ss_dssp HHHTC--CEEEECC
T ss_pred HHcCC--CEEEEcC
Confidence 99984 4454553
No 107
>3h4u_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} PDB: 3hpa_A
Probab=43.81 E-value=42 Score=31.85 Aligned_cols=63 Identities=22% Similarity=0.300 Sum_probs=39.5
Q ss_pred eEEceeeeCcCC--CCC---------------------CCHHHH-------HHHHHHcCCcEEEEecCC----CCCCHHH
Q 019951 73 VVFELHSHSNFS--DGY---------------------LSPSKL-------VERAHCNGVKVLALTDHD----TMSGIPE 118 (333)
Q Consensus 73 ~~~DLH~HT~~S--DG~---------------------~sp~el-------i~~A~~~Gl~~laITDHd----t~~g~~~ 118 (333)
-.+|.|+|...+ .|. ++++++ +..+.+.|+..+ -||. ...++..
T Consensus 88 GlID~H~Hl~~~~~rg~~~~~~~~l~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv--~d~~~~~~~~~~~~~ 165 (479)
T 3h4u_A 88 GLVNTHHHMYQSLTRAVPAAQNAELFGWLTNLYKIWAHLTPEMIEVSTLTAMAELLQSGCTTS--SDHLYIYPNGSRLDD 165 (479)
T ss_dssp CEEECCCCGGGGGSCSCTTTTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEE--ECCBCCCCTTCCHHH
T ss_pred ceeecccccchhhhccccccCCCCHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHhCCeEEE--EECccccCCcchHHH
Confidence 478999999765 221 456654 445566787655 4542 2233556
Q ss_pred HHHHHHhCCCEEEEEEEEe
Q 019951 119 AIETARRFGMKIIPGVEIS 137 (333)
Q Consensus 119 ~~~~a~~~gi~~i~GiEis 137 (333)
+.+.++..|++.+.+....
T Consensus 166 ~~~~~~~~g~r~~~~~~~~ 184 (479)
T 3h4u_A 166 SIGAAQRIGMRFHASRGAM 184 (479)
T ss_dssp HHHHHHHHTCEEEEEEEEC
T ss_pred HHHHHHHcCCEEEEEeeec
Confidence 6777777898877665543
No 108
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=43.49 E-value=46 Score=30.74 Aligned_cols=61 Identities=11% Similarity=0.036 Sum_probs=40.5
Q ss_pred HHHHHHHh-CCEEEEeCCCCCCC--cHHHHHHHHHcCCCEEEEeCCCCC--HHHH-HHHHHHHhhcC
Q 019951 256 AVQLIHRT-GGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDGK--LVGV-IFTLQDGSLFS 316 (333)
Q Consensus 256 vI~~I~~a-GGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~~--~~~~-~~~~~~a~~~~ 316 (333)
+++.+.+. |.++|+|+-+.... ..++.+.+.++|.||+=+..|++. .++. .++...|..-+
T Consensus 66 v~~~~v~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~~~~s~~~l~~~f~~va~a~~ 132 (313)
T 3dz1_A 66 VATRFIKRAKSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPPPSLRTDEQITTYFRQATEAIG 132 (313)
T ss_dssp HHHHHHHHCTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTTCCSHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHhCC
Confidence 44444333 77899998775432 245667788899999999887753 3333 66677777655
No 109
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=42.96 E-value=46 Score=29.88 Aligned_cols=44 Identities=20% Similarity=0.068 Sum_probs=33.3
Q ss_pred cHHHHHHHHHcCCCEEEEeCC--CCCH-------HHHHHHHHHHhhcCCCccc
Q 019951 278 PAAIIRKLKDVGLHGLEVYRS--DGKL-------VGVIFTLQDGSLFSLLPLT 321 (333)
Q Consensus 278 ~~~li~~l~~~GlDGIEv~~~--~~~~-------~~~~~~~~~a~~~~l~~~~ 321 (333)
..+.++.+.++|++|||+... .... +....+.+..+++||....
T Consensus 17 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 69 (340)
T 2zds_A 17 LEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWA 69 (340)
T ss_dssp HHHHHHHHHHHTCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCCEEEeccccccCCccccccCHHHHHHHHHHHHHcCCeEEE
Confidence 367899999999999999852 2232 3457888999999996643
No 110
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=42.49 E-value=53 Score=29.90 Aligned_cols=103 Identities=13% Similarity=0.165 Sum_probs=0.0
Q ss_pred hCCCCCCCHHHHHHHHHHcCcc---------------chHHHHHHHhhcCCCCcccCCCCCCHHHHHHHHHHh----CCE
Q 019951 206 AGKGVAPGRLHVARAMVEAGHV---------------ENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRT----GGL 266 (333)
Q Consensus 206 ~~~~~~~~~~hia~~Lv~~g~~---------------~~~~~~f~~yl~~~~~~yv~~~~~~~eevI~~I~~a----GGv 266 (333)
++++..-.-..+++.|.+.|-. ..++.+-.+-|..| .++.++++++++. -.+
T Consensus 28 aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G---------~~~~~~~~~v~~~r~~~~~~ 98 (271)
T 3nav_A 28 IGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAK---------TTPDICFELIAQIRARNPET 98 (271)
T ss_dssp TTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTT---------CCHHHHHHHHHHHHHHCTTS
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcC---------CCHHHHHHHHHHHHhcCCCC
Q ss_pred EEEe----CCCCCCCcHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHhhcCCCc
Q 019951 267 AVLA----HPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVGVIFTLQDGSLFSLLP 319 (333)
Q Consensus 267 aVLA----HP~~~~~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~~~a~~~~l~~ 319 (333)
+++- .|......+..++.+.+.|+||+=+ ++-++++...+.+.++++|+.+
T Consensus 99 Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIi--pDlp~ee~~~~~~~~~~~gl~~ 153 (271)
T 3nav_A 99 PIGLLMYANLVYARGIDDFYQRCQKAGVDSVLI--ADVPTNESQPFVAAAEKFGIQP 153 (271)
T ss_dssp CEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEE--TTSCGGGCHHHHHHHHHTTCEE
T ss_pred CEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEE--CCCCHHHHHHHHHHHHHcCCeE
No 111
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=42.36 E-value=33 Score=27.09 Aligned_cols=40 Identities=15% Similarity=0.183 Sum_probs=31.5
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCCCCccccccccccccCCceEEceeeeCcCCCCCCCHHHHHHHHHHcCC
Q 019951 27 KKMTAEQSLAFNSVTEWVYLDQSHSSSSSEDDFGVHQILNRAVDNNVVFELHSHSNFSDGYLSPSKLVERAHCNGV 102 (333)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DLH~HT~~SDG~~sp~eli~~A~~~Gl 102 (333)
..+|.++...|+.++..++.+ .||.++.+++.......|.
T Consensus 17 ~~l~~~~~~~l~~~F~~~D~d------------------------------------~~G~i~~~el~~~l~~~g~ 56 (166)
T 2mys_B 17 SMFDETEIEDFKEAFTVIDQN------------------------------------ADGIIDKDDLRETFAAMGR 56 (166)
T ss_pred hhCCHHHHHHHHHHHHHHCCC------------------------------------CCCcCCHHHHHHHHHHhCC
Confidence 367888888898888766433 4788999999988888776
No 112
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=42.07 E-value=32 Score=32.15 Aligned_cols=38 Identities=8% Similarity=0.010 Sum_probs=31.7
Q ss_pred cHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHhhc
Q 019951 278 PAAIIRKLKDVGLHGLEVYRSDGKLVGVIFTLQDGSLF 315 (333)
Q Consensus 278 ~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~~~a~~~ 315 (333)
..++++.|.++|++-||+.+|..++.+...+.++++..
T Consensus 30 Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~ 67 (325)
T 3eeg_A 30 KIIVAKALDELGVDVIEAGFPVSSPGDFNSVVEITKAV 67 (325)
T ss_dssp HHHHHHHHHHHTCSEEEEECTTSCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCHhHHHHHHHHHHhC
Confidence 36788999999999999999988888887777777653
No 113
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=41.68 E-value=24 Score=32.42 Aligned_cols=37 Identities=11% Similarity=-0.022 Sum_probs=30.5
Q ss_pred HHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHhhc
Q 019951 279 AAIIRKLKDVGLHGLEVYRSDGKLVGVIFTLQDGSLF 315 (333)
Q Consensus 279 ~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~~~a~~~ 315 (333)
.++++.|.++|++-||+.+|..++.+...+.++++..
T Consensus 30 ~~i~~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~ 66 (293)
T 3ewb_X 30 IQIALQLEKLGIDVIEAGFPISSPGDFECVKAIAKAI 66 (293)
T ss_dssp HHHHHHHHHHTCSEEEEECGGGCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCccHHHHHHHHHHhc
Confidence 4678889999999999999988888887777777653
No 114
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=41.60 E-value=89 Score=28.38 Aligned_cols=62 Identities=15% Similarity=0.127 Sum_probs=40.3
Q ss_pred HHHHHHH-h-CCEEEEeCCCCCCCc--HHHHHHHHHcCCCEEEEeCCCC---CHHHH-HHHHHHHhhcCC
Q 019951 256 AVQLIHR-T-GGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDG---KLVGV-IFTLQDGSLFSL 317 (333)
Q Consensus 256 vI~~I~~-a-GGvaVLAHP~~~~~~--~~li~~l~~~GlDGIEv~~~~~---~~~~~-~~~~~~a~~~~l 317 (333)
+++.+.+ + |.++|+|+-+..... .++.+.+.+.|.||+=+..|+. +.++. .++.+.|..-++
T Consensus 58 v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~l 127 (294)
T 2ehh_A 58 VIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEVDI 127 (294)
T ss_dssp HHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 4444443 3 458999988764322 3456777889999998887753 44444 666777777664
No 115
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=41.10 E-value=16 Score=34.65 Aligned_cols=28 Identities=25% Similarity=0.210 Sum_probs=25.0
Q ss_pred eEEceeeeCcCCCCCCCHHHHHHHHHHcCCc
Q 019951 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVK 103 (333)
Q Consensus 73 ~~~DLH~HT~~SDG~~sp~eli~~A~~~Gl~ 103 (333)
.+++||+|- ||+++|+.+++.|+++|++
T Consensus 45 PK~eLH~Hl---~gsl~~~~l~~la~~~~~~ 72 (371)
T 2pgf_A 45 PKCELHCHL---DLCFSADFFVSCIRKYNLQ 72 (371)
T ss_dssp CEEEEEEEG---GGCCCHHHHHHHHHHTTCC
T ss_pred cHhhheeCC---ccCCCHHHHHHHHHHcCCC
Confidence 478999995 8999999999999999974
No 116
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=41.03 E-value=15 Score=32.99 Aligned_cols=41 Identities=12% Similarity=0.054 Sum_probs=24.8
Q ss_pred HHHHHHHHHcCCCEEEEeCCC---CCHHHHHHHHHHHhhcCCCcc
Q 019951 279 AAIIRKLKDVGLHGLEVYRSD---GKLVGVIFTLQDGSLFSLLPL 320 (333)
Q Consensus 279 ~~li~~l~~~GlDGIEv~~~~---~~~~~~~~~~~~a~~~~l~~~ 320 (333)
.+ ++.+.++|+||||++... ........+.+.++++||...
T Consensus 40 ~~-l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~l~~~gl~i~ 83 (309)
T 2hk0_A 40 PY-IEKVAKLGFDIIEVAAHHINEYSDAELATIRKSAKDNGIILT 83 (309)
T ss_dssp HH-HHHHHHTTCSEEEEEHHHHTTSCHHHHHHHHHHHHHTTCEEE
T ss_pred HH-HHHHHHhCCCEEEeccCCccccchhhHHHHHHHHHHcCCeEE
Confidence 45 777777777777776431 112445666677777776433
No 117
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=40.53 E-value=84 Score=28.48 Aligned_cols=62 Identities=13% Similarity=0.050 Sum_probs=40.3
Q ss_pred HHHHHHH-h-CCEEEEeCCCCCCCc--HHHHHHHHHcCCCEEEEeCCCC---CHHHH-HHHHHHHhhcCC
Q 019951 256 AVQLIHR-T-GGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDG---KLVGV-IFTLQDGSLFSL 317 (333)
Q Consensus 256 vI~~I~~-a-GGvaVLAHP~~~~~~--~~li~~l~~~GlDGIEv~~~~~---~~~~~-~~~~~~a~~~~l 317 (333)
+++.+.+ + |.++|+|+-+..... .++.+.+.+.|.||+=+..|+. +.++. .++.+.|..-++
T Consensus 58 v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~l 127 (289)
T 2yxg_A 58 VIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESINL 127 (289)
T ss_dssp HHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 4444433 2 458999988764322 3456777888999998887753 44444 666777777664
No 118
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=40.03 E-value=34 Score=32.19 Aligned_cols=45 Identities=16% Similarity=0.172 Sum_probs=33.7
Q ss_pred cHHHHHHHHHcCCCEEEEeC----CCCC-----HHHHHHHHHHHhhcCCCccce
Q 019951 278 PAAIIRKLKDVGLHGLEVYR----SDGK-----LVGVIFTLQDGSLFSLLPLTV 322 (333)
Q Consensus 278 ~~~li~~l~~~GlDGIEv~~----~~~~-----~~~~~~~~~~a~~~~l~~~~~ 322 (333)
..+.++.+.++|++|||++. +... ......+.+.++++||....+
T Consensus 35 ~~e~l~~aa~~G~~~VEl~~~~~~p~~~~~~~~~~~~~~l~~~l~~~GL~i~~~ 88 (386)
T 1muw_A 35 PVETVQRLAELGAHGVTFHDDDLIPFGSSDTERESHIKRFRQALDATGMTVPMA 88 (386)
T ss_dssp HHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBCCEE
T ss_pred HHHHHHHHHHcCCCEEEeeCCCCCcccCcccccHHHHHHHHHHHHHhCCeEEEE
Confidence 46778889999999999985 3322 345678888999999866544
No 119
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=39.96 E-value=83 Score=28.86 Aligned_cols=67 Identities=13% Similarity=0.063 Sum_probs=44.4
Q ss_pred CCHHH---HHHHHHH--hCCEEEEeCCCCCCC--cHHHHHHHHHcCCCEEEEeCCCC---CHHHH-HHHHHHHhhcCC
Q 019951 251 PLAEV---AVQLIHR--TGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG---KLVGV-IFTLQDGSLFSL 317 (333)
Q Consensus 251 ~~~ee---vI~~I~~--aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~---~~~~~-~~~~~~a~~~~l 317 (333)
++.+| +++.+.+ .|.++|+|+-+.... ..++.+.+.+.|.||+=+..|+. +.++. .++.+.|..-++
T Consensus 65 Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~l 142 (304)
T 3l21_A 65 TTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADATEL 142 (304)
T ss_dssp SCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSCSS
T ss_pred CCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 44444 4444433 356899999875432 24567788899999999998763 33444 667778877664
No 120
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=39.82 E-value=98 Score=28.24 Aligned_cols=67 Identities=13% Similarity=0.088 Sum_probs=44.1
Q ss_pred CCHHH---HHHHHHH-hCC--EEEEeCCCCCCC--cHHHHHHHHHcCCCEEEEeCCCC---CHHHH-HHHHHHHhhcCC
Q 019951 251 PLAEV---AVQLIHR-TGG--LAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG---KLVGV-IFTLQDGSLFSL 317 (333)
Q Consensus 251 ~~~ee---vI~~I~~-aGG--vaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~---~~~~~-~~~~~~a~~~~l 317 (333)
++.+| +++.+.+ ++| ++|+|+-+.... ..++.+.+.+.|.||+=+..|+. +.++. .++.+.|..-++
T Consensus 57 Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~l 135 (301)
T 3m5v_A 57 LTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSVDI 135 (301)
T ss_dssp SCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSS
T ss_pred CCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 44444 4444433 344 899999876432 24566788899999999998863 33443 677778877664
No 121
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=39.71 E-value=60 Score=28.96 Aligned_cols=60 Identities=13% Similarity=0.007 Sum_probs=42.8
Q ss_pred HHHHHHHHHHhCCEEEEeCCCCCCCcHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHhhc
Q 019951 253 AEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVGVIFTLQDGSLF 315 (333)
Q Consensus 253 ~eevI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~~~a~~~ 315 (333)
..++.+.+.+.+=++|+-.... ....++.+.+.+.|++.||+-.... ...+...+++++|
T Consensus 24 m~~~~~~l~~~~vv~Vir~~~~-~~a~~~a~al~~gGi~~iEvt~~t~--~a~e~I~~l~~~~ 83 (232)
T 4e38_A 24 MSTINNQLKALKVIPVIAIDNA-EDIIPLGKVLAENGLPAAEITFRSD--AAVEAIRLLRQAQ 83 (232)
T ss_dssp HHHHHHHHHHHCEEEEECCSSG-GGHHHHHHHHHHTTCCEEEEETTST--THHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCEEEEEEcCCH-HHHHHHHHHHHHCCCCEEEEeCCCC--CHHHHHHHHHHhC
Confidence 5678999999999999976432 2236788899999999999965433 3344444556666
No 122
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=39.66 E-value=9.1 Score=35.82 Aligned_cols=70 Identities=17% Similarity=0.159 Sum_probs=44.2
Q ss_pred CCHHHHHHHHHHhC-CEEEEeCCCCCCCcHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHH--HHHhhcCCCccceeec
Q 019951 251 PLAEVAVQLIHRTG-GLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVGVIFTL--QDGSLFSLLPLTVLFG 325 (333)
Q Consensus 251 ~~~eevI~~I~~aG-GvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~--~~a~~~~l~~~~~~~~ 325 (333)
|...++++.+++.+ |++++ |-+.- ...+++.+.+.|+|++-+-+ ..+.+...... +.+-..|++| .+++|
T Consensus 231 p~~~~i~~~i~~~~~~~~~i-h~c~g--~~~~l~~l~~~g~d~~~~d~-~~d~~~~~~~~g~~~~l~Gnldp-~~l~~ 303 (353)
T 1j93_A 231 PYLKQIVDSVKLTHPNLPLI-LYASG--SGGLLERLPLTGVDVVSLDW-TVDMADGRRRLGPNVAIQGNVDP-GVLFG 303 (353)
T ss_dssp HHHHHHHHHHHHHSTTCCEE-EECSS--CTTTGGGGGGGCCSEEECCT-TSCHHHHHHHTCSSSEEECCBCG-GGGGS
T ss_pred HHHHHHHHHHHHhCCCCCEE-EECCC--hHHHHHHHHhcCCCEEEeCC-CCCHHHHHHHcCCCeEEEecCCH-HHHcC
Confidence 45678899999886 78777 53321 23467888899999887644 33444443321 2355677777 45555
No 123
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=39.64 E-value=67 Score=29.22 Aligned_cols=54 Identities=15% Similarity=0.175 Sum_probs=34.5
Q ss_pred CCEEEEeCCCCCCCc--HHHHHHHHHcCCCEEEEeCCCC---CHHHH-HHHHHHHhhcCC
Q 019951 264 GGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDG---KLVGV-IFTLQDGSLFSL 317 (333)
Q Consensus 264 GGvaVLAHP~~~~~~--~~li~~l~~~GlDGIEv~~~~~---~~~~~-~~~~~~a~~~~l 317 (333)
|.++|+|+-+..... .++.+.+.+.|.||+=+..|+. +.++. .++.+.|..-++
T Consensus 68 gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~l 127 (292)
T 2vc6_A 68 GRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAASTI 127 (292)
T ss_dssp TSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSS
T ss_pred CCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 457888887654321 3456667788888888877753 44444 566667776664
No 124
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=39.40 E-value=99 Score=26.76 Aligned_cols=65 Identities=11% Similarity=0.063 Sum_probs=46.9
Q ss_pred CCHHHHHHHHHHhCCEEEEeCCCCC---CCcHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHhhcCCCccceee
Q 019951 251 PLAEVAVQLIHRTGGLAVLAHPWAL---KNPAAIIRKLKDVGLHGLEVYRSDGKLVGVIFTLQDGSLFSLLPLTVLF 324 (333)
Q Consensus 251 ~~~eevI~~I~~aGGvaVLAHP~~~---~~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~~~a~~~~l~~~~~~~ 324 (333)
..+.++++.++++ |..|+-||+.. .....-++.+...+.|||=-. ...+.+.|+++||++-.-.|
T Consensus 43 ~~L~~iv~~ik~~-gK~vivh~DlI~GLs~d~~ai~fL~~~~pdGIIsT--------k~~~i~~Akk~GL~tIqR~F 110 (188)
T 1vkf_A 43 LNLKFHLKILKDR-GKTVFVDMDFVNGLGEGEEAILFVKKAGADGIITI--------KPKNYVVAKKNGIPAVLRFF 110 (188)
T ss_dssp TTHHHHHHHHHHT-TCEEEEEGGGEETCCSSHHHHHHHHHHTCSEEEES--------CHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHHHC-CCeEEEecCcccccCCCHHHHHHHHhcCCCEEEcC--------cHHHHHHHHHcCCEEeeEEE
Confidence 4589999999999 79999999853 333445666667789988322 24578889999987654443
No 125
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=39.25 E-value=31 Score=30.48 Aligned_cols=60 Identities=8% Similarity=0.028 Sum_probs=30.4
Q ss_pred HHHHHHHHh--CCEEEEeCCCCCCCcHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHhhcCC
Q 019951 255 VAVQLIHRT--GGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVGVIFTLQDGSLFSL 317 (333)
Q Consensus 255 evI~~I~~a--GGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~~~a~~~~l 317 (333)
++|+.|++. -.+++.+|-.- .++...++.+.++|.|.|-+...... +...+.+.++++|.
T Consensus 52 ~~v~~ir~~~~~~~~~dvhLmv-~~p~~~i~~~~~aGad~itvH~Ea~~--~~~~~i~~i~~~G~ 113 (228)
T 3ovp_A 52 PVVESLRKQLGQDPFFDMHMMV-SKPEQWVKPMAVAGANQYTFHLEATE--NPGALIKDIRENGM 113 (228)
T ss_dssp HHHHHHHHHHCSSSCEEEEEEC-SCGGGGHHHHHHHTCSEEEEEGGGCS--CHHHHHHHHHHTTC
T ss_pred HHHHHHHHhhCCCCcEEEEEEe-CCHHHHHHHHHHcCCCEEEEccCCch--hHHHHHHHHHHcCC
Confidence 456666655 24555555432 23344566666666666666542221 23444444555443
No 126
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=38.37 E-value=37 Score=32.03 Aligned_cols=44 Identities=16% Similarity=-0.030 Sum_probs=33.1
Q ss_pred cHHHHHHHHHcCCCEEEEeC----CCCC-----HHHHHHHHHHHhhcCCCccc
Q 019951 278 PAAIIRKLKDVGLHGLEVYR----SDGK-----LVGVIFTLQDGSLFSLLPLT 321 (333)
Q Consensus 278 ~~~li~~l~~~GlDGIEv~~----~~~~-----~~~~~~~~~~a~~~~l~~~~ 321 (333)
..+.++.++++|++|||++. +... ......+.+.++++||....
T Consensus 35 l~e~l~~aa~~G~d~VEl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GL~i~~ 87 (394)
T 1xla_A 35 PVEAVHKLAELGAYGITFHDNDLIPFDATEAEREKILGDFNQALKDTGLKVPM 87 (394)
T ss_dssp HHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHCCBCCE
T ss_pred HHHHHHHHHHcCCCEEEecCCccCcccCCchhhHHHHHHHHHHHHHcCCeEEE
Confidence 46788999999999999986 2222 34567888899999986543
No 127
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=37.86 E-value=80 Score=28.76 Aligned_cols=64 Identities=6% Similarity=-0.070 Sum_probs=48.7
Q ss_pred HHHHHHHHhCCEEEEeCCCCCCCcHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHhhcCCCcc
Q 019951 255 VAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVGVIFTLQDGSLFSLLPL 320 (333)
Q Consensus 255 evI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~~~a~~~~l~~~ 320 (333)
+-+..|+++=.++||.--+- .+..-+.++..+|.|+|=+....-+.+++..+.+.|+++|++++
T Consensus 110 ~~L~~ir~~v~lPVl~Kdfi--~d~~qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~lGl~~l 173 (272)
T 3tsm_A 110 EFLTAARQACSLPALRKDFL--FDPYQVYEARSWGADCILIIMASVDDDLAKELEDTAFALGMDAL 173 (272)
T ss_dssp HHHHHHHHTSSSCEEEESCC--CSTHHHHHHHHTTCSEEEEETTTSCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHhcCCCEEECCcc--CCHHHHHHHHHcCCCEEEEcccccCHHHHHHHHHHHHHcCCeEE
Confidence 45677777777888854221 22335777899999999999988888889999999999998643
No 128
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=37.66 E-value=28 Score=30.59 Aligned_cols=64 Identities=11% Similarity=0.084 Sum_probs=39.8
Q ss_pred eEEceeeeCcCCC---------CCCC---HHHHHHHHHHcCCcEEEEecCCCC-CCHHHHHHHHHhCCCEEEEEEEE
Q 019951 73 VVFELHSHSNFSD---------GYLS---PSKLVERAHCNGVKVLALTDHDTM-SGIPEAIETARRFGMKIIPGVEI 136 (333)
Q Consensus 73 ~~~DLH~HT~~SD---------G~~s---p~eli~~A~~~Gl~~laITDHdt~-~g~~~~~~~a~~~gi~~i~GiEi 136 (333)
..+|.|+|-.... ...+ +.+.+++|.+.|+..+..+-++.. ..+..+.+.+++.++.+++++-+
T Consensus 6 G~iD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~~~~~~~~v~~~~G~ 82 (291)
T 1bf6_A 6 GYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGY 82 (291)
T ss_dssp SEEEEEECSSEECHHHHTCGGGEECCHHHHHHHHHHHHHTTEEEEEECCCGGGTCCHHHHHHHHHHHCCEEEEEECC
T ss_pred ceeeeccCeecCCcccccCCCcccCCHHHHHHHHHHHHHcCCCEEEecCCCcCCCCHHHHHHHHHhcCCeEEEeecc
Confidence 5789999976321 1122 334667788999998765544323 23666667777777776665443
No 129
>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A
Probab=37.65 E-value=60 Score=30.43 Aligned_cols=48 Identities=13% Similarity=0.181 Sum_probs=41.1
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCEEEEEEEEe
Q 019951 85 DGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEIS 137 (333)
Q Consensus 85 DG~~sp~eli~~A~~~Gl~~laITDHdt~~g~~~~~~~a~~~gi~~i~GiEis 137 (333)
|--.+|+++++..+.+|++.|=|-|-| +.+..+++..||+++.|+-.+
T Consensus 12 ~nlp~p~~Vv~llks~gi~~VRlY~~D-----~~vL~Al~~sgi~V~lGV~n~ 59 (323)
T 3ur8_A 12 NNLPSDQDVIKLYNANNIKKMRIYYPH-----TNVFNALKGSNIEIILDVPNQ 59 (323)
T ss_dssp SSCCCHHHHHHHHHHTTCCEEEESSCC-----HHHHHHHTTCCCEEEEEECGG
T ss_pred CCCCCHHHHHHHHHhCCCCeEEecCCC-----HHHHHHHHhcCCeEEEecccc
Confidence 445789999999999999999998766 677778888999999999764
No 130
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=37.58 E-value=93 Score=28.33 Aligned_cols=62 Identities=11% Similarity=0.015 Sum_probs=41.3
Q ss_pred HHHHHHH--hCCEEEEeCCCCCCC--cHHHHHHHHHcCCCEEEEeCCCC---CHHHH-HHHHHHHhhcCC
Q 019951 256 AVQLIHR--TGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG---KLVGV-IFTLQDGSLFSL 317 (333)
Q Consensus 256 vI~~I~~--aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~---~~~~~-~~~~~~a~~~~l 317 (333)
+++.+.+ .|.++|+|+-+.... ..++.+.+.+.|.||+=+..|+. +.++. .++.+.|..-++
T Consensus 65 v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~l 134 (297)
T 3flu_A 65 VIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATSI 134 (297)
T ss_dssp HHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 4444433 256899998775432 24566788899999999988763 33333 667778877664
No 131
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=37.30 E-value=1.2e+02 Score=27.79 Aligned_cols=62 Identities=10% Similarity=0.026 Sum_probs=41.6
Q ss_pred HHHHHHH-h-CCEEEEeCCCCCCCc--HHHHHHHHHcCCCEEEEeCCCC---CHHHH-HHHHHHHhhcCC
Q 019951 256 AVQLIHR-T-GGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDG---KLVGV-IFTLQDGSLFSL 317 (333)
Q Consensus 256 vI~~I~~-a-GGvaVLAHP~~~~~~--~~li~~l~~~GlDGIEv~~~~~---~~~~~-~~~~~~a~~~~l 317 (333)
+++.+.+ + |.++|+|+-+..... .++.+.+.+.|.||+=+..|+. +.++. .++.+.|..-++
T Consensus 74 v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~l 143 (304)
T 3cpr_A 74 LLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAATEV 143 (304)
T ss_dssp HHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 4554443 2 458999998764322 4466778889999999988754 44444 666777877664
No 132
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=37.29 E-value=45 Score=28.69 Aligned_cols=44 Identities=5% Similarity=-0.065 Sum_probs=34.8
Q ss_pred CCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCEEE
Q 019951 87 YLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKII 131 (333)
Q Consensus 87 ~~sp~eli~~A~~~Gl~~laITDHdt~~g~~~~~~~a~~~gi~~i 131 (333)
..++++.++.+++.|++.|-|.-... ....++.+.+++.|+.+.
T Consensus 14 ~~~~~~~l~~~~~~G~~~vEl~~~~~-~~~~~~~~~l~~~gl~~~ 57 (260)
T 1k77_A 14 EVPFIERFAAARKAGFDAVEFLFPYN-YSTLQIQKQLEQNHLTLA 57 (260)
T ss_dssp TSCGGGHHHHHHHHTCSEEECSCCTT-SCHHHHHHHHHHTTCEEE
T ss_pred CCCHHHHHHHHHHhCCCEEEecCCCC-CCHHHHHHHHHHcCCceE
Confidence 57899999999999999999875322 236677788888999765
No 133
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=37.09 E-value=85 Score=28.49 Aligned_cols=67 Identities=15% Similarity=0.088 Sum_probs=43.3
Q ss_pred CCHHH---HHHHHHH--hCCEEEEeCCCCCCC--cHHHHHHHHHcCCCEEEEeCCCC---CHHHH-HHHHHHHhhcCC
Q 019951 251 PLAEV---AVQLIHR--TGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG---KLVGV-IFTLQDGSLFSL 317 (333)
Q Consensus 251 ~~~ee---vI~~I~~--aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~---~~~~~-~~~~~~a~~~~l 317 (333)
++.+| +++.+.+ .|.++|+|+-+.... ..++.+.+.+.|.||+=+..|+. +.++. .++.+.|..-++
T Consensus 51 Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~l 128 (291)
T 3tak_A 51 LSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAVEL 128 (291)
T ss_dssp SCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCS
T ss_pred CCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 44444 4444433 256899998775432 24566788889999999988763 33333 677778877664
No 134
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=35.86 E-value=86 Score=28.48 Aligned_cols=62 Identities=10% Similarity=0.019 Sum_probs=39.9
Q ss_pred HHHHHHH--hCCEEEEeCCCCCCC--cHHHHHHHHHcCCCEEEEeCCCC---CHHHH-HHHHHHHhhcCC
Q 019951 256 AVQLIHR--TGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG---KLVGV-IFTLQDGSLFSL 317 (333)
Q Consensus 256 vI~~I~~--aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~---~~~~~-~~~~~~a~~~~l 317 (333)
+++.+.+ .|.++|+|+-+.... ..++.+.+.++|.||+=+..|+. +.++. .++.+.|..-++
T Consensus 60 v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~l 129 (292)
T 3daq_A 60 ILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADAVKL 129 (292)
T ss_dssp HHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 4444433 356899998775432 24466778888999999887753 33333 666777776664
No 135
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=35.76 E-value=1e+02 Score=28.12 Aligned_cols=54 Identities=13% Similarity=0.075 Sum_probs=36.8
Q ss_pred CCEEEEeCCCCCCCc--HHHHHHHHHcCCCEEEEeCCCC---CHHHH-HHHHHHHhhcCC
Q 019951 264 GGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDG---KLVGV-IFTLQDGSLFSL 317 (333)
Q Consensus 264 GGvaVLAHP~~~~~~--~~li~~l~~~GlDGIEv~~~~~---~~~~~-~~~~~~a~~~~l 317 (333)
|.++|+|+-+..... .++.+.+.+.|.||+=+..|+. +.+++ .++.+.|..-++
T Consensus 80 grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~l 139 (301)
T 1xky_A 80 KRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAESTPL 139 (301)
T ss_dssp TSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCSS
T ss_pred CCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 558899887764322 3456777888999998887753 44444 666777776664
No 136
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=35.56 E-value=51 Score=28.93 Aligned_cols=59 Identities=12% Similarity=0.018 Sum_probs=39.6
Q ss_pred EEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCC--C--CCHHHHHHHHHhCCCEEEE
Q 019951 74 VFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDT--M--SGIPEAIETARRFGMKIIP 132 (333)
Q Consensus 74 ~~DLH~HT~~SDG~~sp~eli~~A~~~Gl~~laITDHdt--~--~g~~~~~~~a~~~gi~~i~ 132 (333)
++-+++.+...+-..++++.++.+++.|++.|-|...+- + ....++.+.+++.|+.+..
T Consensus 3 kigi~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 65 (294)
T 3vni_A 3 KHGIYYAYWEQEWEADYKYYIEKVAKLGFDILEIAASPLPFYSDIQINELKACAHGNGITLTV 65 (294)
T ss_dssp CEEEEGGGGCSSSCCCHHHHHHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHTTCEEEE
T ss_pred eEEEehhhhcCCcCcCHHHHHHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHHcCCeEEE
Confidence 344444433333335899999999999999999986431 1 1234566777889998755
No 137
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=35.36 E-value=84 Score=29.01 Aligned_cols=62 Identities=10% Similarity=0.052 Sum_probs=39.8
Q ss_pred HHHHHHH--hCCEEEEeCCCCCCC--cHHHHHHHHHcCCCEEEEeCCCC---CHHHH-HHHHHHHhhcCC
Q 019951 256 AVQLIHR--TGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG---KLVGV-IFTLQDGSLFSL 317 (333)
Q Consensus 256 vI~~I~~--aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~---~~~~~-~~~~~~a~~~~l 317 (333)
+++++.+ .|.++|+|+-+.... ..++.+.+.++|.||+=+..|+. +.+++ .++.+.|..-++
T Consensus 82 v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~l 151 (315)
T 3na8_A 82 VVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAIGV 151 (315)
T ss_dssp HHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 4444433 355888888775432 24566777888999998887753 33443 666777777664
No 138
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=34.99 E-value=86 Score=28.40 Aligned_cols=63 Identities=10% Similarity=0.066 Sum_probs=40.0
Q ss_pred HHHHHHHHhCCEEEEeCCCCCCCcHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHhhcCCCc
Q 019951 255 VAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVGVIFTLQDGSLFSLLP 319 (333)
Q Consensus 255 evI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~~~a~~~~l~~ 319 (333)
+-+..|+++=.++|+---+ --....+.++.+.|.|||=+..+.-+.++...+.+.|+++|+++
T Consensus 103 ~~l~~ir~~v~lPvl~kdf--iid~~qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~~lGl~~ 165 (272)
T 3qja_A 103 DDLDAVRASVSIPVLRKDF--VVQPYQIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLGMTA 165 (272)
T ss_dssp HHHHHHHHHCSSCEEEESC--CCSHHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHhCCCCEEECcc--ccCHHHHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHCCCcE
Confidence 4566666666677764211 11222367777788888877666666667777777777777743
No 139
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=34.87 E-value=1.1e+02 Score=27.69 Aligned_cols=54 Identities=7% Similarity=-0.029 Sum_probs=37.2
Q ss_pred CCEEEEeCCCCCCCc--HHHHHHHHHcCCCEEEEeCCCC---CHHHH-HHHHHHHhhcCC
Q 019951 264 GGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDG---KLVGV-IFTLQDGSLFSL 317 (333)
Q Consensus 264 GGvaVLAHP~~~~~~--~~li~~l~~~GlDGIEv~~~~~---~~~~~-~~~~~~a~~~~l 317 (333)
|.++|+|+-+..... .++.+.+.+.|.||+=+..|+. +.++. .++.+.|..-++
T Consensus 72 grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~l 131 (293)
T 1f6k_A 72 DQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAETGS 131 (293)
T ss_dssp TSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCC
T ss_pred CCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 558999988764322 3456777888999999987753 44444 666777776664
No 140
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=34.62 E-value=1e+02 Score=26.50 Aligned_cols=45 Identities=13% Similarity=0.114 Sum_probs=34.7
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEecCC------CCCCHHHHHHHHHhCCCEE
Q 019951 86 GYLSPSKLVERAHCNGVKVLALTDHD------TMSGIPEAIETARRFGMKI 130 (333)
Q Consensus 86 G~~sp~eli~~A~~~Gl~~laITDHd------t~~g~~~~~~~a~~~gi~~ 130 (333)
+.+++++.++.+++.|++.|-|.-.. .-....++.+.+++.|+.+
T Consensus 17 ~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~ 67 (272)
T 2q02_A 17 PGLSIEAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEI 67 (272)
T ss_dssp TTSCHHHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEE
T ss_pred CCCCHHHHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeE
Confidence 35789999999999999999997421 1234667788888899875
No 141
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=34.48 E-value=20 Score=30.52 Aligned_cols=29 Identities=14% Similarity=-0.161 Sum_probs=23.6
Q ss_pred CCCC-HHHHHHHHHHcCCcEEEEec-CCCCC
Q 019951 86 GYLS-PSKLVERAHCNGVKVLALTD-HDTMS 114 (333)
Q Consensus 86 G~~s-p~eli~~A~~~Gl~~laITD-Hdt~~ 114 (333)
|.-. |-+++.+|+++|++.+|||- ..+-.
T Consensus 88 g~n~~~ie~A~~ake~G~~vIaITs~~~~~~ 118 (170)
T 3jx9_A 88 TERSDLLASLARYDAWHTPYSIITLGDVTET 118 (170)
T ss_dssp SCCHHHHHHHHHHHHHTCCEEEEESSCCCTT
T ss_pred CCCHHHHHHHHHHHHCCCcEEEEeCcchhcc
Confidence 4444 89999999999999999998 55443
No 142
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=34.32 E-value=1.1e+02 Score=27.94 Aligned_cols=61 Identities=8% Similarity=0.051 Sum_probs=39.1
Q ss_pred HHHHHHH--hCCEEEEeCCCCCCCc--HHHHHHHHHcCCCEEEEeCCCC---CHHHH-HHHHHHHhhcC
Q 019951 256 AVQLIHR--TGGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDG---KLVGV-IFTLQDGSLFS 316 (333)
Q Consensus 256 vI~~I~~--aGGvaVLAHP~~~~~~--~~li~~l~~~GlDGIEv~~~~~---~~~~~-~~~~~~a~~~~ 316 (333)
+++.+.+ .|.++|+|+-+..... .++.+.+.+.|.||+=+..|+. +.++. .++.+.|..-+
T Consensus 69 v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~ 137 (303)
T 2wkj_A 69 VLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSAD 137 (303)
T ss_dssp HHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 4444433 2558999987764322 3456777888999998887753 44444 56666776655
No 143
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=34.31 E-value=93 Score=28.73 Aligned_cols=62 Identities=11% Similarity=0.093 Sum_probs=39.8
Q ss_pred HHHHHHH--hCCEEEEeCCCCCCC--cHHHHHHHHHcCCCEEEEeCCCC---CHHHH-HHHHHHHhhcCC
Q 019951 256 AVQLIHR--TGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG---KLVGV-IFTLQDGSLFSL 317 (333)
Q Consensus 256 vI~~I~~--aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~---~~~~~-~~~~~~a~~~~l 317 (333)
+++.+.+ .|.++|+|+-+.... ..++.+.+.+.|.||+=+..|+. +.+++ .++.+.|..-++
T Consensus 80 v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~l 149 (315)
T 3si9_A 80 IIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAISI 149 (315)
T ss_dssp HHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcCCC
Confidence 4444433 256888988775432 24566778888999998887753 33333 666777776664
No 144
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=34.04 E-value=1.5e+02 Score=25.82 Aligned_cols=70 Identities=10% Similarity=-0.030 Sum_probs=48.5
Q ss_pred CCHHHHHHHHHHhCCEEEEeCCCCCCCcHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHhhcCCCccceeec
Q 019951 251 PLAEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVGVIFTLQDGSLFSLLPLTVLFG 325 (333)
Q Consensus 251 ~~~eevI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 325 (333)
.+..++++.+.+.+=++|+-... .....++++.+.+.|++-||+-... +.......+++++|. ...+..|
T Consensus 5 ~~~~~~~~~l~~~~ii~vir~~~-~~~~~~~~~al~~gGv~~iel~~k~--~~~~~~i~~l~~~~~--~l~vgaG 74 (224)
T 1vhc_A 5 YTTQQIIEKLRELKIVPVIALDN-ADDILPLADTLAKNGLSVAEITFRS--EAAADAIRLLRANRP--DFLIAAG 74 (224)
T ss_dssp CCHHHHHHHHHHHCEEEEECCSS-GGGHHHHHHHHHHTTCCEEEEETTS--TTHHHHHHHHHHHCT--TCEEEEE
T ss_pred cchHHHHHHHHHCCeEEEEeCCC-HHHHHHHHHHHHHcCCCEEEEeccC--chHHHHHHHHHHhCc--CcEEeeC
Confidence 45667899999999999987532 1223567899999999999998543 334455556888874 3344444
No 145
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=34.00 E-value=50 Score=28.95 Aligned_cols=60 Identities=13% Similarity=0.054 Sum_probs=34.4
Q ss_pred HHHHHHHHhCCEEEEeCCCCCCCcHHHHHHHHHcCCCEEEEeCC--CCCHHHHHHHHHHHhhcCC
Q 019951 255 VAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRS--DGKLVGVIFTLQDGSLFSL 317 (333)
Q Consensus 255 evI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~--~~~~~~~~~~~~~a~~~~l 317 (333)
++++.|++.-.+.+.+|-.- .+++..++.+.+.|.|||-+... .. +....+.+.++.+|.
T Consensus 52 ~~v~~lr~~~~~~~~vhlmv-~dp~~~i~~~~~aGadgv~vh~e~~~~--~~~~~~~~~i~~~g~ 113 (230)
T 1tqj_A 52 LIVDAIRPLTKKTLDVHLMI-VEPEKYVEDFAKAGADIISVHVEHNAS--PHLHRTLCQIRELGK 113 (230)
T ss_dssp HHHHHHGGGCCSEEEEEEES-SSGGGTHHHHHHHTCSEEEEECSTTTC--TTHHHHHHHHHHTTC
T ss_pred HHHHHHHhhcCCcEEEEEEc-cCHHHHHHHHHHcCCCEEEECcccccc--hhHHHHHHHHHHcCC
Confidence 56677766555566666544 23444567777777777766654 22 233444555555544
No 146
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=33.91 E-value=1.2e+02 Score=28.02 Aligned_cols=54 Identities=15% Similarity=0.074 Sum_probs=37.6
Q ss_pred CCEEEEeCCCCCCC--cHHHHHHHHHcCCCEEEEeCCCC---CHHHH-HHHHHHHhhcCC
Q 019951 264 GGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG---KLVGV-IFTLQDGSLFSL 317 (333)
Q Consensus 264 GGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~---~~~~~-~~~~~~a~~~~l 317 (333)
|.++|+|+-+.... ..++.+.+.+.|.||+=+..|+. +.++. .++.+.|..-++
T Consensus 91 grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~l 150 (314)
T 3qze_A 91 GRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVAI 150 (314)
T ss_dssp TSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHSCS
T ss_pred CCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 55899998775432 24566788899999999987753 33333 667777877664
No 147
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=33.78 E-value=1e+02 Score=26.36 Aligned_cols=45 Identities=9% Similarity=0.039 Sum_probs=35.3
Q ss_pred CCCHHHHHHHHHHcCCcEEEEe-cCC-----CCCCHHHHHHHHHhCCCEEE
Q 019951 87 YLSPSKLVERAHCNGVKVLALT-DHD-----TMSGIPEAIETARRFGMKII 131 (333)
Q Consensus 87 ~~sp~eli~~A~~~Gl~~laIT-DHd-----t~~g~~~~~~~a~~~gi~~i 131 (333)
..++++.++.+++.|++.|-|. -.. +-....++.+.+++.|+.+.
T Consensus 13 ~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~ 63 (278)
T 1i60_A 13 NSNLKLDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKPL 63 (278)
T ss_dssp TCCHHHHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEEE
T ss_pred CCCHHHHHHHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCCCee
Confidence 3789999999999999999998 332 12456677888888999754
No 148
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=33.43 E-value=99 Score=28.30 Aligned_cols=54 Identities=13% Similarity=0.128 Sum_probs=34.5
Q ss_pred CCEEEEeCCCCCCCc--HHHHHHHHHcCCCEEEEeCCCC---CHHHH-HHHHHHHhhcCC
Q 019951 264 GGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDG---KLVGV-IFTLQDGSLFSL 317 (333)
Q Consensus 264 GGvaVLAHP~~~~~~--~~li~~l~~~GlDGIEv~~~~~---~~~~~-~~~~~~a~~~~l 317 (333)
|.++|+|+-+..... .++.+.+.+.|.||+=+..|+. +.++. .++.+.|..-++
T Consensus 80 grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~l 139 (306)
T 1o5k_A 80 GKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERTDL 139 (306)
T ss_dssp TSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSS
T ss_pred CCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 457888887654321 3456677788888888877753 34443 566667766554
No 149
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=32.94 E-value=19 Score=33.69 Aligned_cols=69 Identities=9% Similarity=0.058 Sum_probs=44.2
Q ss_pred CCHHHHHHHHHHhCCEEEEeCCCCCCCcHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHH-HHHhhcCCCccceeec
Q 019951 251 PLAEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVGVIFTL-QDGSLFSLLPLTVLFG 325 (333)
Q Consensus 251 ~~~eevI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~-~~a~~~~l~~~~~~~~ 325 (333)
|...++++.+++. |++++-|.... ..+++.+.+.|+|++-+-+ ..+++...... +.+-..|++| .+++|
T Consensus 231 p~~~~i~~~i~~~-g~~~i~~~~G~---~~~l~~l~~~g~d~~~~d~-~~d~~~~~~~g~~~~l~Gnldp-~~l~~ 300 (359)
T 2inf_A 231 PVMNRIFSELAKE-NVPLIMFGVGA---SHLAGDWHDLPLDVVGLDW-RLGIDEARSKGITKTVQGNLDP-SILLA 300 (359)
T ss_dssp HHHHHHHHHHGGG-CSCEEEECTTC---GGGHHHHHTSSCSEEECCT-TSCHHHHHHTTCCSEEECCBCG-GGGGS
T ss_pred HHHHHHHHHHHHc-CCcEEEEcCCc---HHHHHHHHHhCCCEEEeCC-CCCHHHHHHcCCCEEEEecCCh-HHhcC
Confidence 4567889999987 57778887632 4578899999999887643 33444433220 1244566766 45555
No 150
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=32.89 E-value=79 Score=29.49 Aligned_cols=61 Identities=20% Similarity=0.216 Sum_probs=39.4
Q ss_pred eEEceeeeCcCC--CC---------------------CCCHHH-------HHHHHHHcCCcEEEEecCCCCCCHHHHHHH
Q 019951 73 VVFELHSHSNFS--DG---------------------YLSPSK-------LVERAHCNGVKVLALTDHDTMSGIPEAIET 122 (333)
Q Consensus 73 ~~~DLH~HT~~S--DG---------------------~~sp~e-------li~~A~~~Gl~~laITDHdt~~g~~~~~~~ 122 (333)
-.+|.|+|...+ .| .+++++ .+..+.+.|+..+. |+ ......+.+.
T Consensus 65 GlID~H~Hl~~~~~~g~~~~~~~~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~--d~--~~~~~~~~~~ 140 (447)
T 4f0r_A 65 GLINLHGHSAMSLLRGLADDKALMDWLTNYIWPTEGKHVHDDFVFDGSLLAMGEMIRGGTTTIN--DM--YFYNAAVARA 140 (447)
T ss_dssp CEEEEEECGGGGGGTTSSCSSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEE--EC--BSCHHHHHHH
T ss_pred CccchhhChhhHhhccCCCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEE--Ec--ccCHHHHHHH
Confidence 478999999544 22 256664 34456678988765 43 2223455666
Q ss_pred HHhCCCEEEEEEEEe
Q 019951 123 ARRFGMKIIPGVEIS 137 (333)
Q Consensus 123 a~~~gi~~i~GiEis 137 (333)
+...+++.+.+..+.
T Consensus 141 ~~~~g~r~~~~~~~~ 155 (447)
T 4f0r_A 141 GLASGMRTFVGCSIL 155 (447)
T ss_dssp HHHHTCEEEEEEEEC
T ss_pred HHHcCCeEEEEchhc
Confidence 677888888877764
No 151
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=32.70 E-value=1.1e+02 Score=28.46 Aligned_cols=54 Identities=15% Similarity=0.069 Sum_probs=36.9
Q ss_pred CCEEEEeCCCCCCCc--HHHHHHHHHcCCCEEEEeCCCC---CHHHH-HHHHHHHhhcCC
Q 019951 264 GGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDG---KLVGV-IFTLQDGSLFSL 317 (333)
Q Consensus 264 GGvaVLAHP~~~~~~--~~li~~l~~~GlDGIEv~~~~~---~~~~~-~~~~~~a~~~~l 317 (333)
|.++|+|+-+..... .++.+.+.+.|.||+=+..|+. +.+++ .++.+.|..-++
T Consensus 102 grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~l 161 (332)
T 2r8w_A 102 GRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGATAL 161 (332)
T ss_dssp TSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSS
T ss_pred CCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 458999987754322 3456777888999998887754 44444 666777777664
No 152
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=32.23 E-value=1.2e+02 Score=27.84 Aligned_cols=63 Identities=11% Similarity=0.021 Sum_probs=42.6
Q ss_pred HHHHHHH--hCCEEEEeCCCCCCCc--HHHHHHHHHcCCCEEEEeCCCC---CHHHH-HHHHHHHhhcCCCcc
Q 019951 256 AVQLIHR--TGGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDG---KLVGV-IFTLQDGSLFSLLPL 320 (333)
Q Consensus 256 vI~~I~~--aGGvaVLAHP~~~~~~--~~li~~l~~~GlDGIEv~~~~~---~~~~~-~~~~~~a~~~~l~~~ 320 (333)
+++.+.+ .|.++|+|+-+. ... .++.+.+.+.|.||+=+..|+. +.+++ .++.+.|..-++ |.
T Consensus 70 vi~~~~~~~~grvpViaGvg~-st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~l-Pi 140 (314)
T 3d0c_A 70 VATRVTELVNGRATVVAGIGY-SVDTAIELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEALDA-PS 140 (314)
T ss_dssp HHHHHHHHHTTSSEEEEEECS-SHHHHHHHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHSSS-CE
T ss_pred HHHHHHHHhCCCCeEEecCCc-CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCC-CE
Confidence 4444433 256899999887 432 3456778889999999988753 44444 677778887774 54
No 153
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=31.91 E-value=1.8e+02 Score=25.13 Aligned_cols=67 Identities=18% Similarity=0.150 Sum_probs=46.2
Q ss_pred CCCCHHHHHHHHHHhCCEEEEeCCCCC---CCcHHHHHHHHH-cCCCEEEEeCCCCCHHHHHHHHHHHhhcCCCccceee
Q 019951 249 SEPLAEVAVQLIHRTGGLAVLAHPWAL---KNPAAIIRKLKD-VGLHGLEVYRSDGKLVGVIFTLQDGSLFSLLPLTVLF 324 (333)
Q Consensus 249 ~~~~~eevI~~I~~aGGvaVLAHP~~~---~~~~~li~~l~~-~GlDGIEv~~~~~~~~~~~~~~~~a~~~~l~~~~~~~ 324 (333)
+-..+.++|+.++++|-.+++ ||+.. .....-++.|++ .+.|||=- ....+.+.|++.||.+-.-.|
T Consensus 39 ~i~~l~~~v~~lk~~~K~v~V-h~Dli~Gls~d~~ai~fL~~~~~pdGIIs--------Tk~~~i~~Ak~~gL~tIqR~F 109 (192)
T 3kts_A 39 HVAQLKALVKYAQAGGKKVLL-HADLVNGLKNDDYAIDFLCTEICPDGIIS--------TRGNAIMKAKQHKMLAIQRLF 109 (192)
T ss_dssp ETTTHHHHHHHHHHTTCEEEE-EGGGEETCCCSHHHHHHHHHTTCCSEEEE--------SCHHHHHHHHHTTCEEEEEEE
T ss_pred cHHHHHHHHHHHHHcCCeEEE-ecCchhccCCcHHHHHHHHhCCCCCEEEe--------CcHHHHHHHHHCCCeEEEEEE
Confidence 446789999999999998888 99853 334555666666 37888732 224567788888875543333
No 154
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=31.79 E-value=47 Score=29.48 Aligned_cols=39 Identities=18% Similarity=0.229 Sum_probs=30.6
Q ss_pred HHHHHHcCCCEEEEeCCC--CCHHHHHHHHHHHhhcCCCcc
Q 019951 282 IRKLKDVGLHGLEVYRSD--GKLVGVIFTLQDGSLFSLLPL 320 (333)
Q Consensus 282 i~~l~~~GlDGIEv~~~~--~~~~~~~~~~~~a~~~~l~~~ 320 (333)
+.++.++|.|.|-+.|+. ....+.....+.|.+.||.|.
T Consensus 78 ~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~i 118 (226)
T 1w0m_A 78 LENIKEAGGSGVILNHSEAPLKLNDLARLVAKAKSLGLDVV 118 (226)
T ss_dssp HHHHHHHTCCEEEECCTTSCCBHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHcCCCEEEEeeeeccCCHHHHHHHHHHHHHCCCEEE
Confidence 667778888888888887 566677777888888888664
No 155
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=31.77 E-value=1.6e+02 Score=26.93 Aligned_cols=44 Identities=14% Similarity=0.148 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhCCEEEEeCCCCCCCcHHHHHHHHHcC----CCEEEEe
Q 019951 253 AEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVG----LHGLEVY 296 (333)
Q Consensus 253 ~eevI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~G----lDGIEv~ 296 (333)
+++++++.++.|.+...+|..|+......++++++.| +-.|++.
T Consensus 129 a~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~iG~i~~v~~~ 176 (350)
T 3rc1_A 129 AERLFAVARERGLLLMENFMFLHHPQHRQVADMLDEGVIGEIRSFAAS 176 (350)
T ss_dssp HHHHHHHHHHTTCCEEEECGGGGCTHHHHHHHHHHTTTTCSEEEEEEE
T ss_pred HHHHHHHHHHhCCEEEEEecccCCHHHHHHHHHHhcCCCCCeEEEEEE
Confidence 4567778888888889999988875566677777765 3445554
No 156
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=31.61 E-value=86 Score=29.79 Aligned_cols=61 Identities=13% Similarity=0.235 Sum_probs=39.5
Q ss_pred eEEceeeeCcCC--CC---------------------CCCHHHHH-------HHHHHcCCcEEEEecCCCCCCHHHHHHH
Q 019951 73 VVFELHSHSNFS--DG---------------------YLSPSKLV-------ERAHCNGVKVLALTDHDTMSGIPEAIET 122 (333)
Q Consensus 73 ~~~DLH~HT~~S--DG---------------------~~sp~eli-------~~A~~~Gl~~laITDHdt~~g~~~~~~~ 122 (333)
-.+|.|+|...+ .| .++++++. ..+.+.|+..+. |+. .....+.+.
T Consensus 74 GlID~H~Hl~~~~~~g~~~~~~l~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~--d~~--~~~~~~~~a 149 (472)
T 4dzh_A 74 GLVNAHTHNPMTLLRGVADDLPLMVWLQQHIWPVEAAVIGPEFVADGTTLAIAEMLRGGTTCVN--ENY--FFADVQAAV 149 (472)
T ss_dssp CEEEEEECGGGGGGTTSSCSCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEE--EEC--SCHHHHHHH
T ss_pred CccccccChhhHHhccccCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEE--Ecc--cCHHHHHHH
Confidence 478999999764 22 24555433 336778888665 654 223455666
Q ss_pred HHhCCCEEEEEEEEe
Q 019951 123 ARRFGMKIIPGVEIS 137 (333)
Q Consensus 123 a~~~gi~~i~GiEis 137 (333)
+.+.|++.+.+..+.
T Consensus 150 ~~~~g~r~~~~~~~~ 164 (472)
T 4dzh_A 150 YKQHGFRALVGAVII 164 (472)
T ss_dssp HHHTTCEEEEEEEEC
T ss_pred HHHhCCeEEEEeccc
Confidence 777899888877664
No 157
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=31.49 E-value=68 Score=30.01 Aligned_cols=61 Identities=15% Similarity=0.212 Sum_probs=39.0
Q ss_pred eEEceeeeCcCC--CC---------------------CCCHHHH-------HHHHHHcCCcEEEEecCCCCCCHHHHHHH
Q 019951 73 VVFELHSHSNFS--DG---------------------YLSPSKL-------VERAHCNGVKVLALTDHDTMSGIPEAIET 122 (333)
Q Consensus 73 ~~~DLH~HT~~S--DG---------------------~~sp~el-------i~~A~~~Gl~~laITDHdt~~g~~~~~~~ 122 (333)
-.+|.|+|...+ .| .++++++ +..+.+.|+..+. |+. .....+.+.
T Consensus 67 G~ID~H~H~~~~~~~g~~~~~~l~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~--d~~--~~~~~~~~a 142 (451)
T 4dyk_A 67 GLVNAHGHSAMSLFRGLADDLPLMTWLQDHIWPAEGQWVSEDFIRDGTELAIAEQVKGGITCFS--DMY--FYPQAICGV 142 (451)
T ss_dssp CEEECCCCGGGGGGTTSSCSSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEE--EEC--SCHHHHHHH
T ss_pred cccchhhChhhHHhccCCCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEE--Ecc--cCHHHHHHH
Confidence 478999999544 22 2566643 3445588887764 542 223455666
Q ss_pred HHhCCCEEEEEEEEe
Q 019951 123 ARRFGMKIIPGVEIS 137 (333)
Q Consensus 123 a~~~gi~~i~GiEis 137 (333)
+.+.|++.+.+..+.
T Consensus 143 ~~~~g~r~~~~~~~~ 157 (451)
T 4dyk_A 143 VHDSGVRAQVAIPVL 157 (451)
T ss_dssp HHHHTCEEEEEEEEC
T ss_pred HHHcCCeEEEEchhh
Confidence 677899888877765
No 158
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=31.39 E-value=95 Score=28.31 Aligned_cols=54 Identities=9% Similarity=0.021 Sum_probs=33.0
Q ss_pred CCEEEEeCCCCCCCc--HHHHHHHHHcCCCEEEEeCCCC---CHHHH-HHHHHHHhhcCC
Q 019951 264 GGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDG---KLVGV-IFTLQDGSLFSL 317 (333)
Q Consensus 264 GGvaVLAHP~~~~~~--~~li~~l~~~GlDGIEv~~~~~---~~~~~-~~~~~~a~~~~l 317 (333)
|.++|+|+-+..... .++.+.+.+.|.||+=+..|+. +.++. .++.+.|..-++
T Consensus 68 grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~l 127 (297)
T 2rfg_A 68 GRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAIDI 127 (297)
T ss_dssp TSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHCSS
T ss_pred CCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 447788877653321 3455666777888888877653 33433 556666766554
No 159
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=31.35 E-value=18 Score=36.69 Aligned_cols=59 Identities=15% Similarity=0.271 Sum_probs=40.6
Q ss_pred eEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCC------CCHHHHHHHHHhCCCEEEEEE
Q 019951 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTM------SGIPEAIETARRFGMKIIPGV 134 (333)
Q Consensus 73 ~~~DLH~HT~~SDG~~sp~eli~~A~~~Gl~~laITDHdt~------~g~~~~~~~a~~~gi~~i~Gi 134 (333)
-.+|.|+|... +..+|+++.+.|...|+..+.. |.++. .++..+.+.++..++.+...+
T Consensus 90 G~ID~H~Hl~~--~~~~~~~~~~~al~~GvTtvv~-~p~~~~~v~g~~~~~~~l~~a~~~~~~v~~~~ 154 (608)
T 3nqb_A 90 GLIDTHMHIES--SMITPAAYAAAVVARGVTTIVW-DPHEFGNVHGVDGVRWAAKAIENLPLRAILLA 154 (608)
T ss_dssp CEEEEEECGGG--GTSCHHHHHHHHHTTTEEEEEE-CCHHHHHHHTHHHHHHHHHHHTTCSSEEEEEE
T ss_pred CeEecccCccc--ccCCHHHHHHHHHhCCeEEEEc-CCccccccCCHHHHHHHHHHhhhcCcEEEEec
Confidence 46899999864 4568999999999999987653 44332 234445556666666665544
No 160
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=31.31 E-value=41 Score=31.43 Aligned_cols=34 Identities=9% Similarity=0.004 Sum_probs=24.4
Q ss_pred HHHH-HHHHcCCCEEEEeCCCCCHHHHHHHHHHHh
Q 019951 280 AIIR-KLKDVGLHGLEVYRSDGKLVGVIFTLQDGS 313 (333)
Q Consensus 280 ~li~-~l~~~GlDGIEv~~~~~~~~~~~~~~~~a~ 313 (333)
++++ .|.++|++-||+.++..++.+..++.+++.
T Consensus 45 ~i~~~~L~~~Gv~~IE~g~~~~~~~~~~~v~~~~~ 79 (337)
T 3ble_A 45 NIAKFLLQKLNVDRVEIASARVSKGELETVQKIME 79 (337)
T ss_dssp HHHHHHHHTTCCSEEEEEETTSCTTHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHh
Confidence 3455 677889999999888777766666666555
No 161
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=31.07 E-value=84 Score=25.92 Aligned_cols=49 Identities=12% Similarity=0.189 Sum_probs=33.9
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEecCCCCC--CHHHHHHHHHhC---CCEEEEE
Q 019951 85 DGYLSPSKLVERAHCNGVKVLALTDHDTMS--GIPEAIETARRF---GMKIIPG 133 (333)
Q Consensus 85 DG~~sp~eli~~A~~~Gl~~laITDHdt~~--g~~~~~~~a~~~---gi~~i~G 133 (333)
....+|+++++.|.+.+.+.++|+=-.+.. ...++.+..++. +++++.|
T Consensus 53 G~~~p~e~lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vG 106 (161)
T 2yxb_A 53 GLRQTPEQVAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVLG 106 (161)
T ss_dssp CSBCCHHHHHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEEE
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 446899999999999999999998654432 233444455544 3666665
No 162
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}
Probab=30.87 E-value=1e+02 Score=28.99 Aligned_cols=61 Identities=16% Similarity=0.128 Sum_probs=39.4
Q ss_pred eEEceeeeCcCC--CC---------------------CCCHHHH-------HHHHHHcCCcEEEEecCCCCCCHHHHHHH
Q 019951 73 VVFELHSHSNFS--DG---------------------YLSPSKL-------VERAHCNGVKVLALTDHDTMSGIPEAIET 122 (333)
Q Consensus 73 ~~~DLH~HT~~S--DG---------------------~~sp~el-------i~~A~~~Gl~~laITDHdt~~g~~~~~~~ 122 (333)
-.+|.|+|...+ .| ..+++++ +..+.+.|+..+. |+.. ....+.+.
T Consensus 87 GlID~H~H~~~~~~~g~~~~~~l~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~--d~~~--~~~~~~~~ 162 (468)
T 3lnp_A 87 GWVNAHGHAAMSLFRGLADDLPLMTWLQEHVWPAEAQHVDEHFVKQGTELAIAEMIQSGTTTFA--DMYF--YPQQSGEA 162 (468)
T ss_dssp CEEECSCCGGGGGGTTSSCSCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEE--ECCS--CHHHHHHH
T ss_pred CeechhhChhhhhhccCcCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEE--Eccc--CHHHHHHH
Confidence 478999999543 22 2666654 3446778887664 5522 23455666
Q ss_pred HHhCCCEEEEEEEEe
Q 019951 123 ARRFGMKIIPGVEIS 137 (333)
Q Consensus 123 a~~~gi~~i~GiEis 137 (333)
+++.+++.+.+..+.
T Consensus 163 ~~~~g~r~~~~~~~~ 177 (468)
T 3lnp_A 163 ALAAGIRAVCFAPVL 177 (468)
T ss_dssp HHHHTCEEEEEEEEC
T ss_pred HHHcCCeEEEecccc
Confidence 777889888777664
No 163
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A*
Probab=30.61 E-value=77 Score=29.63 Aligned_cols=47 Identities=15% Similarity=0.242 Sum_probs=39.9
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCEEEEEEEE
Q 019951 85 DGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEI 136 (333)
Q Consensus 85 DG~~sp~eli~~A~~~Gl~~laITDHdt~~g~~~~~~~a~~~gi~~i~GiEi 136 (333)
|--.+|.++++..+.+|++.+=|-|-| ..+..+++..||+++.|+--
T Consensus 11 ~nlp~p~~vv~llks~gi~~VRlYdaD-----~~vL~Al~~sgi~v~vGV~n 57 (316)
T 3em5_A 11 NNLPPVSEVIALYKKSNITRMRIYDPN-----QAVLEALRGSNIELILGVPN 57 (316)
T ss_dssp TTCCCHHHHHHHHHHTTCCEEECSSCC-----HHHHHHHTTCCCEEEEEECG
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEecCC-----HHHHHHhhcCCceEEEeccc
Confidence 445789999999999999999998865 45777888899999999964
No 164
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=30.59 E-value=2e+02 Score=22.68 Aligned_cols=131 Identities=12% Similarity=0.031 Sum_probs=63.1
Q ss_pred HHHhCCCCCCHHHHHHHhCCCCCCCHHHHHHHHHHc-Ccc---chHHHHHHHhhcCCCCcccCCCCCCHHHHHHHHHHhC
Q 019951 189 KLNKLKLPLKWEHVAKIAGKGVAPGRLHVARAMVEA-GHV---ENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTG 264 (333)
Q Consensus 189 ~L~~~g~~i~~e~l~~~~~~~~~~~~~hia~~Lv~~-g~~---~~~~~~f~~yl~~~~~~yv~~~~~~~eevI~~I~~aG 264 (333)
.+.+.|+++..+.+....+.+ ...+.+.+... +.. ..+...+..++...-..+.....+.+.++++.+++.|
T Consensus 30 ~~~~~g~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g 105 (214)
T 3e58_A 30 FLGQKGISIDHLPPSFFIGGN----TKQVWENILRDEYDKWDVSTLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQG 105 (214)
T ss_dssp HHHHTTCCCTTSCHHHHTTSC----GGGCHHHHHGGGGGGSCHHHHHHHHHHHHHHSCCCHHHHBCTTHHHHHHHHHHTT
T ss_pred HHHHcCCCCCHHHHHHHcCCC----HHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHhhcccCCCcCchHHHHHHHHHHCC
Confidence 345567777666665554432 22234444432 111 2233444444432211111123577889999999997
Q ss_pred CEEEEeCCCCCCCcHHHHHHHHHcCC----CEEEEeCCCC-CHHHHHHHHHHHhhcCCCccce-eecc
Q 019951 265 GLAVLAHPWALKNPAAIIRKLKDVGL----HGLEVYRSDG-KLVGVIFTLQDGSLFSLLPLTV-LFGH 326 (333)
Q Consensus 265 GvaVLAHP~~~~~~~~li~~l~~~Gl----DGIEv~~~~~-~~~~~~~~~~~a~~~~l~~~~~-~~~~ 326 (333)
--.++.--. .....-..+...|+ +.+-...... ..-.-..+...++++|+.|..+ .|||
T Consensus 106 ~~~~i~s~~---~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~iGD 170 (214)
T 3e58_A 106 LEIGLASSS---VKADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALIIED 170 (214)
T ss_dssp CEEEEEESS---CHHHHHHHHHHTTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCCGGGEEEEEC
T ss_pred CCEEEEeCC---cHHHHHHHHHHcCcHhheeeEeecccccCCCCChHHHHHHHHHcCCChHHeEEEec
Confidence 654443211 11223334555675 5443322211 1111234556777889877654 5665
No 165
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=30.44 E-value=1.2e+02 Score=28.29 Aligned_cols=54 Identities=13% Similarity=0.097 Sum_probs=36.2
Q ss_pred CCEEEEeCCCCCCCc--HHHHHHHHHcCCCEEEEeCCCC---CHHHH-HHHHHHHhhcCC
Q 019951 264 GGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDG---KLVGV-IFTLQDGSLFSL 317 (333)
Q Consensus 264 GGvaVLAHP~~~~~~--~~li~~l~~~GlDGIEv~~~~~---~~~~~-~~~~~~a~~~~l 317 (333)
|.++|+|+-+..... .++.+.+.+.|.|||=+..|+. +.+++ .++.+.|..-++
T Consensus 99 grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~l 158 (343)
T 2v9d_A 99 RRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSVTL 158 (343)
T ss_dssp TSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHTCSS
T ss_pred CCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 557888887754322 3456677888999998887753 44444 666777776664
No 166
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=30.41 E-value=66 Score=33.13 Aligned_cols=44 Identities=16% Similarity=0.103 Sum_probs=34.5
Q ss_pred HHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHhhcCCCcccee
Q 019951 279 AAIIRKLKDVGLHGLEVYRSDGKLVGVIFTLQDGSLFSLLPLTVL 323 (333)
Q Consensus 279 ~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 323 (333)
.++++.|.++|+|-||+-+|..++.+...+.++++. ++.|.++.
T Consensus 96 l~Ia~~L~~lGVd~IEaGfP~asp~D~e~v~~i~~~-~l~~~~~~ 139 (644)
T 3hq1_A 96 RRMFDLLVRMGYKEIEVGFPSASQTDFDFVREIIEQ-GAIPDDVT 139 (644)
T ss_dssp HHHHHHHHHHTCSEEEEECTTTCHHHHHHHHHHHHT-TCSCTTCE
T ss_pred HHHHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHhc-CCCCCCeE
Confidence 457889999999999999999999998888887765 43343443
No 167
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=30.26 E-value=39 Score=32.24 Aligned_cols=36 Identities=11% Similarity=0.016 Sum_probs=30.3
Q ss_pred HHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHhh
Q 019951 279 AAIIRKLKDVGLHGLEVYRSDGKLVGVIFTLQDGSL 314 (333)
Q Consensus 279 ~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~~~a~~ 314 (333)
.++++.|.++|++-||+.+|..++.+..++.++++.
T Consensus 37 l~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~ 72 (370)
T 3rmj_A 37 IRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKT 72 (370)
T ss_dssp HHHHHHHHHHTCSEEEEEEGGGCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHh
Confidence 456778889999999999998888888888887765
No 168
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=30.02 E-value=96 Score=27.57 Aligned_cols=70 Identities=11% Similarity=0.023 Sum_probs=39.3
Q ss_pred HHHHHHHHhCC-E-E-EEeCCCCCCCcHHHHHHHH-HcCCCEEEEeCCCC----------CHHHHHHHHHHHhhcCCCcc
Q 019951 255 VAVQLIHRTGG-L-A-VLAHPWALKNPAAIIRKLK-DVGLHGLEVYRSDG----------KLVGVIFTLQDGSLFSLLPL 320 (333)
Q Consensus 255 evI~~I~~aGG-v-a-VLAHP~~~~~~~~li~~l~-~~GlDGIEv~~~~~----------~~~~~~~~~~~a~~~~l~~~ 320 (333)
.+.+++.+..+ + + +.-||.......+.|++++ +.|+.||++....+ ....+....+.|.++|+ |.
T Consensus 83 ~~~~~~~~~p~r~~~~~~v~p~~~~~~~~el~~~~~~~g~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l-pv 161 (327)
T 2dvt_A 83 VLAEECAKRPDRFLAFAALPLQDPDAATEELQRCVNDLGFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKLDV-PF 161 (327)
T ss_dssp HHHHHHHHCTTTEEEEECCCTTSHHHHHHHHHHHHHTTCCCEEEEESSBCCTTCCSCBCTTSGGGHHHHHHHHHHTC-CE
T ss_pred HHHHHHhhCCCceEEEeecCcCCHHHHHHHHHHHHhcCCceEEEECCCCCCCcccCCCCCCCcchHHHHHHHHHcCC-eE
Confidence 34455555544 3 2 2235543211123455554 56999998865432 12335778888999997 77
Q ss_pred ceeec
Q 019951 321 TVLFG 325 (333)
Q Consensus 321 ~~~~~ 325 (333)
.+--|
T Consensus 162 ~iH~~ 166 (327)
T 2dvt_A 162 YLHPR 166 (327)
T ss_dssp EEECC
T ss_pred EECCC
Confidence 76654
No 169
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=29.90 E-value=1.1e+02 Score=28.21 Aligned_cols=54 Identities=13% Similarity=-0.068 Sum_probs=35.7
Q ss_pred CCEEEEeCCCCCCC--cHHHHHHHHHcCCCEEEEeCC-CC----CHHHH-HHHHHHHhhcCC
Q 019951 264 GGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRS-DG----KLVGV-IFTLQDGSLFSL 317 (333)
Q Consensus 264 GGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~-~~----~~~~~-~~~~~~a~~~~l 317 (333)
|.++|+|+-+.... ..++.+.+.+.|.||+=+..| +. +.+++ .++...|..-++
T Consensus 79 grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~~l 140 (318)
T 3qfe_A 79 PDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQSPL 140 (318)
T ss_dssp TTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHHCSS
T ss_pred CCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhCCC
Confidence 55888888775432 244567778889999988887 33 23343 667777776664
No 170
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=29.76 E-value=7.5 Score=37.04 Aligned_cols=71 Identities=14% Similarity=0.085 Sum_probs=48.1
Q ss_pred CCHHHHHHHHHHh-C--CEEEEeCCCCCCCcHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHH--HHHhhcCCCccceeec
Q 019951 251 PLAEVAVQLIHRT-G--GLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVGVIFTL--QDGSLFSLLPLTVLFG 325 (333)
Q Consensus 251 ~~~eevI~~I~~a-G--GvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~--~~a~~~~l~~~~~~~~ 325 (333)
|...++++.+++. + |++++-|+... ..+++.+.+.|+|.|-+-. ..++.+..... +.+-+.|++|.. +||
T Consensus 235 Py~k~i~~~l~~~~~g~~~pvi~f~~g~---~~~l~~l~~~g~d~i~~d~-~~dl~~ak~~~g~~~~l~Gnldp~~-L~g 309 (368)
T 4exq_A 235 DYIRRVVAQLKREHDGARVPAIAFTKGG---GLWLEDLAATGVDAVGLDW-TVNLGRARERVAGRVALQGNLDPTI-LFA 309 (368)
T ss_dssp HHHHHHHHTSCCEETTEECCEEEEETTC---GGGHHHHHTSSCSEEECCT-TSCHHHHHHHHTTSSEEEEEECGGG-GGS
T ss_pred HHHHHHHHHHHHhcCCCCCcEEEEcCCc---HHHHHHHHHhCCCEEeeCC-CCCHHHHHHHhCCCEEEEECCCHHH-hCC
Confidence 5567889999875 3 58888887642 3578889999999887643 34555554332 256677887764 465
Q ss_pred c
Q 019951 326 H 326 (333)
Q Consensus 326 ~ 326 (333)
.
T Consensus 310 t 310 (368)
T 4exq_A 310 P 310 (368)
T ss_dssp C
T ss_pred C
Confidence 3
No 171
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=29.60 E-value=73 Score=27.37 Aligned_cols=53 Identities=13% Similarity=0.201 Sum_probs=36.1
Q ss_pred CceEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCEE
Q 019951 71 NNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKI 130 (333)
Q Consensus 71 ~~~~~DLH~HT~~SDG~~sp~eli~~A~~~Gl~~laITDHdt~~g~~~~~~~a~~~gi~~ 130 (333)
..+.+|+|+|. .|+..++.+.+.|.+.+.+-+-....-..++.+.+++.|+.+
T Consensus 60 ~~i~ld~~l~d-------~p~~~~~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~~~ 112 (218)
T 3jr2_A 60 HILVCDMKTTD-------GGAILSRMAFEAGADWITVSAAAHIATIAACKKVADELNGEI 112 (218)
T ss_dssp SEEEEEEEECS-------CHHHHHHHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEE
T ss_pred CcEEEEEeecc-------cHHHHHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCcc
Confidence 34777888873 367789999999999998844322112345666677777654
No 172
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=29.59 E-value=29 Score=30.31 Aligned_cols=74 Identities=20% Similarity=0.229 Sum_probs=42.7
Q ss_pred HHHHHHHHHHhCCE--EEEeCCCC-CCCcHHHHHHHHHcCCCEEEE------eCCCCCH-HHHHHHHHHHhhcCCCccce
Q 019951 253 AEVAVQLIHRTGGL--AVLAHPWA-LKNPAAIIRKLKDVGLHGLEV------YRSDGKL-VGVIFTLQDGSLFSLLPLTV 322 (333)
Q Consensus 253 ~eevI~~I~~aGGv--aVLAHP~~-~~~~~~li~~l~~~GlDGIEv------~~~~~~~-~~~~~~~~~a~~~~l~~~~~ 322 (333)
.+++++.++++|-- -+...... .....++-+.+.+.||. |-+ +.+..+. +.+..+.++|..+|-.-..+
T Consensus 25 ~~~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~l~~~gl~-i~~~~~~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~ 103 (264)
T 1yx1_A 25 QASFLPLLAMAGAQRVELREELFAGPPDTEALTAAIQLQGLE-CVFSSPLELWREDGQLNPELEPTLRRAEACGAGWLKV 103 (264)
T ss_dssp GGGGHHHHHHHTCSEEEEEGGGCSSCCCHHHHHHHHHHTTCE-EEEEEEEEEECTTSSBCTTHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEEEHHhcCCCHHHHHHHHHHHHcCCE-EEEecchhhcCCchhHHHHHHHHHHHHHHcCCCEEEE
Confidence 46788888888743 33321111 11334566677788875 222 2222234 66788889999998655555
Q ss_pred eeccc
Q 019951 323 LFGHF 327 (333)
Q Consensus 323 ~~~~~ 327 (333)
-.|.+
T Consensus 104 ~~g~~ 108 (264)
T 1yx1_A 104 SLGLL 108 (264)
T ss_dssp EEECC
T ss_pred ecCCC
Confidence 55544
No 173
>1914_A Signal recognition particle 9/14 fusion protein; ALU domain, RNA binding, signal recognition particle (SRP), translation regulation; 2.53A {Mus musculus} SCOP: d.49.1.1 d.49.1.1 PDB: 1e8o_A* 1e8s_A 1ry1_C*
Probab=29.39 E-value=6.3 Score=35.56 Aligned_cols=26 Identities=38% Similarity=0.653 Sum_probs=7.2
Q ss_pred hhhhhhhhhhhhhhcCCCCCCCCHHH
Q 019951 8 EKRSKDKKKKKKQKRGGGKKKMTAEQ 33 (333)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (333)
.+++++||||+++++++.+++++.++
T Consensus 114 KKrdKKkkKk~~~~~k~~~~~~~~~~ 139 (232)
T 1914_A 114 KKRDKKNKSKKSKPAQGGEQKLISEE 139 (232)
T ss_dssp BCC-----------CCEEEEEC----
T ss_pred Cccccchhhhhhhhhhhhhhhhhhhh
Confidence 45566666666666666667777654
No 174
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=29.25 E-value=38 Score=27.94 Aligned_cols=26 Identities=27% Similarity=0.279 Sum_probs=21.5
Q ss_pred CCCHHHHHHHHHHcCCcEEEEecCCC
Q 019951 87 YLSPSKLVERAHCNGVKVLALTDHDT 112 (333)
Q Consensus 87 ~~sp~eli~~A~~~Gl~~laITDHdt 112 (333)
+-..-++++.|+++|.+.++||+...
T Consensus 100 t~~~~~~~~~ak~~g~~vi~IT~~~~ 125 (187)
T 3sho_A 100 LRDTVAALAGAAERGVPTMALTDSSV 125 (187)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 34566789999999999999999654
No 175
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=29.21 E-value=38 Score=30.05 Aligned_cols=36 Identities=14% Similarity=0.146 Sum_probs=28.0
Q ss_pred eEEceeeeCcCCC------------------CCCCHHHHHHHHHHcCCcEEEEe
Q 019951 73 VVFELHSHSNFSD------------------GYLSPSKLVERAHCNGVKVLALT 108 (333)
Q Consensus 73 ~~~DLH~HT~~SD------------------G~~sp~eli~~A~~~Gl~~laIT 108 (333)
+.+|.|+|-...+ ...+++++++.+.+.|++...++
T Consensus 2 ~~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~m~~~GV~~~v~~ 55 (307)
T 2f6k_A 2 SKIDFHTHYLPTSYVEALKRHVPGDPDGWPTPEWTPQLTLNFMRDNDISYSILS 55 (307)
T ss_dssp CEEEEEEECCCHHHHHHHHHHCCSSGGGSCCCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred CeEEEecCcCCHHHHHHHHHhccCCcccCcCCCCCHHHHHHHHHHcCCCEEEEe
Confidence 4689999965321 23789999999999999986664
No 176
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=29.13 E-value=1.2e+02 Score=26.97 Aligned_cols=45 Identities=18% Similarity=0.173 Sum_probs=34.0
Q ss_pred CCCHHHHHHHHHHcCCcEEEEecC-CCCC---------CHHHHHHHHHhCCCEEE
Q 019951 87 YLSPSKLVERAHCNGVKVLALTDH-DTMS---------GIPEAIETARRFGMKII 131 (333)
Q Consensus 87 ~~sp~eli~~A~~~Gl~~laITDH-dt~~---------g~~~~~~~a~~~gi~~i 131 (333)
..++++.++.|++.|++.|-|.-. ..+. ...++.+.+++.|+.+.
T Consensus 14 ~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~ 68 (340)
T 2zds_A 14 DLPLEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCW 68 (340)
T ss_dssp TSCHHHHHHHHHHHTCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTTCEEE
T ss_pred CCCHHHHHHHHHHcCCCEEEeccccccCCccccccCHHHHHHHHHHHHHcCCeEE
Confidence 578999999999999999999852 1121 23566777888999763
No 177
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=29.01 E-value=1.2e+02 Score=27.85 Aligned_cols=63 Identities=14% Similarity=0.036 Sum_probs=42.0
Q ss_pred HHHHHHHh--CCEEEEeCCCCCCC--cHHHHHHHHHcCCCEEEEeCCCC---CHHHH-HHHHHHHhhcCCCcc
Q 019951 256 AVQLIHRT--GGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG---KLVGV-IFTLQDGSLFSLLPL 320 (333)
Q Consensus 256 vI~~I~~a--GGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~---~~~~~-~~~~~~a~~~~l~~~ 320 (333)
+++++.+. |.++|+|+-+. .. ..++.+.+.++|.||+=+..|+. +.++. .++.+.|..-++ |.
T Consensus 70 v~~~~v~~~~grvpViaGvg~-~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~l-Pi 140 (316)
T 3e96_A 70 EVRRTVEYVHGRALVVAGIGY-ATSTAIELGNAAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEALDF-PS 140 (316)
T ss_dssp HHHHHHHHHTTSSEEEEEECS-SHHHHHHHHHHHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHHHTS-CE
T ss_pred HHHHHHHHhCCCCcEEEEeCc-CHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCC-CE
Confidence 45444333 56899999874 21 13456778899999999987753 44444 777788887774 54
No 178
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=28.94 E-value=36 Score=28.50 Aligned_cols=29 Identities=28% Similarity=0.265 Sum_probs=22.5
Q ss_pred CCCCCCCHHHHHHHHHHcCCcEEEEecCC
Q 019951 83 FSDGYLSPSKLVERAHCNGVKVLALTDHD 111 (333)
Q Consensus 83 ~SDG~~sp~eli~~A~~~Gl~~laITDHd 111 (333)
+|--+-.+-++++.|+++|.+.++||+..
T Consensus 122 ~SG~t~~~i~~~~~ak~~g~~vI~IT~~~ 150 (199)
T 1x92_A 122 TSGNSANVIQAIQAAHDREMLVVALTGRD 150 (199)
T ss_dssp SSSCCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 34334556789999999999999999963
No 179
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=28.85 E-value=57 Score=31.05 Aligned_cols=38 Identities=18% Similarity=0.124 Sum_probs=28.8
Q ss_pred HHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHhhcCC
Q 019951 279 AAIIRKLKDVGLHGLEVYRSDGKLVGVIFTLQDGSLFSL 317 (333)
Q Consensus 279 ~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~~~a~~~~l 317 (333)
..+++.|.++|++-||+.+|..++.....+..+++ .++
T Consensus 28 ~~ia~~L~~~Gv~~IE~g~p~~~~~~~~~~~~i~~-~~~ 65 (382)
T 2ztj_A 28 VEIAKALDEFGIEYIEVTTPVASPQSRKDAEVLAS-LGL 65 (382)
T ss_dssp HHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHT-SCC
T ss_pred HHHHHHHHHcCcCEEEEcCCcCCHHHHHHHHHHHh-cCC
Confidence 45678888999999999999888887766655554 344
No 180
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=28.84 E-value=91 Score=28.29 Aligned_cols=54 Identities=17% Similarity=0.143 Sum_probs=31.7
Q ss_pred CCEEEEeCCCCCCCc--HHHHHHHHHcCCCEEEEeCCCC---CHHHH-HHHHHHHhhcCC
Q 019951 264 GGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDG---KLVGV-IFTLQDGSLFSL 317 (333)
Q Consensus 264 GGvaVLAHP~~~~~~--~~li~~l~~~GlDGIEv~~~~~---~~~~~-~~~~~~a~~~~l 317 (333)
|.++|+|+-+..... .++.+.+.+.|.||+=+..|+. +.++. .++.+.|..-++
T Consensus 69 gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~l 128 (292)
T 2ojp_A 69 GRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHTDL 128 (292)
T ss_dssp TSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSS
T ss_pred CCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 447777776653321 3345556677888887776653 33333 555666665553
No 181
>1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A*
Probab=28.73 E-value=37 Score=30.38 Aligned_cols=27 Identities=37% Similarity=0.431 Sum_probs=20.4
Q ss_pred EEEEeCCCCCCCcHHHHHHHHHcCCCEEEE
Q 019951 266 LAVLAHPWALKNPAAIIRKLKDVGLHGLEV 295 (333)
Q Consensus 266 vaVLAHP~~~~~~~~li~~l~~~GlDGIEv 295 (333)
+.|+||+ -|.-.-++.+.+.|.|+||+
T Consensus 7 ~~iiaHr---ENTl~Af~~A~~~Gad~IE~ 33 (285)
T 1xx1_A 7 IWNLAHM---VNAVAQIPDFLDLGANALEA 33 (285)
T ss_dssp EEEEESC---CCSTTHHHHHHHHTCSEEEE
T ss_pred cEEEEeh---hccHHHHHHHHHhCCCEEEE
Confidence 3589997 34445577888999999996
No 182
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=28.67 E-value=45 Score=29.59 Aligned_cols=62 Identities=15% Similarity=0.224 Sum_probs=41.6
Q ss_pred HHHHHhCCEEEEeCC---C---CCCCcHHHHHHHHHcCCCEEEEeCCC--CCHHHHHHHHHHHhhcCCCcc
Q 019951 258 QLIHRTGGLAVLAHP---W---ALKNPAAIIRKLKDVGLHGLEVYRSD--GKLVGVIFTLQDGSLFSLLPL 320 (333)
Q Consensus 258 ~~I~~aGGvaVLAHP---~---~~~~~~~li~~l~~~GlDGIEv~~~~--~~~~~~~~~~~~a~~~~l~~~ 320 (333)
..+.+.=.++|+|-- . .|.. +-.+.++.++|.|.|-+.|+. ....+.....+.|.+.||.|.
T Consensus 52 ~~v~~~~~i~v~aQdv~~~~~Ga~TG-eis~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~i 121 (225)
T 1hg3_A 52 RMIAESVEIPVFAQHIDPIKPGSHTG-HVLPEAVKEAGAVGTLLNHSENRMILADLEAAIRRAEEVGLMTM 121 (225)
T ss_dssp HHHHHSCSSCBEESCCCSCCSBSCTT-CCCHHHHHHTTCCEEEESCGGGCCBHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHhcCCceeeeeCCcccCCCccC-cccHHHHHHcCCCEEEECcchhcCCHHHHHHHHHHHHHCCCEEE
Confidence 333333367787742 2 1211 223677888999999999887 666777888888999998765
No 183
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=28.67 E-value=1.9e+02 Score=26.63 Aligned_cols=66 Identities=12% Similarity=0.155 Sum_probs=46.5
Q ss_pred HHHHHHH-hCCEEEEeCCCCCCCcHH---HHHHHHHcCCCEEEEeCCC-CC--HHHHHHHHHHHhh-cCCCccceee
Q 019951 256 AVQLIHR-TGGLAVLAHPWALKNPAA---IIRKLKDVGLHGLEVYRSD-GK--LVGVIFTLQDGSL-FSLLPLTVLF 324 (333)
Q Consensus 256 vI~~I~~-aGGvaVLAHP~~~~~~~~---li~~l~~~GlDGIEv~~~~-~~--~~~~~~~~~~a~~-~~l~~~~~~~ 324 (333)
+.+.+.+ ..|.++|=-|.... +++ +++.+++.|.|+|.|- |. -+ .+....+.+..++ +++ |.-++|
T Consensus 30 ~~~~l~~~~~~~~~liDPdK~~-~~~~~~~~~~~~~sGtDai~VG-S~~vt~~~~~~~~~v~~ik~~~~l-Pvil~f 103 (286)
T 3vk5_A 30 VLARLREHQPGPVHIIDPFKVP-VTEAVEKAAELTRLGFAAVLLA-STDYESFESHMEPYVAAVKAATPL-PVVLHF 103 (286)
T ss_dssp HHHHHHHSCCEEEEEECTTTSC-HHHHHHHHHHHHHTTCSCEEEE-CSCCSSHHHHHHHHHHHHHHHCSS-CEEEEC
T ss_pred HHHHHHhccCCceEEECCCCCC-cHHHHHHHHHHHhcCCCEEEEc-cCCCCcchHHHHHHHHHHHHhCCC-CEEEEC
Confidence 4444443 67789999997532 233 6888899999999999 65 35 5666777777777 886 766645
No 184
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=28.63 E-value=71 Score=27.56 Aligned_cols=56 Identities=5% Similarity=-0.014 Sum_probs=39.1
Q ss_pred eEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCC-----CHHHHHHHHHhCCCEEE
Q 019951 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMS-----GIPEAIETARRFGMKII 131 (333)
Q Consensus 73 ~~~DLH~HT~~SDG~~sp~eli~~A~~~Gl~~laITDHdt~~-----g~~~~~~~a~~~gi~~i 131 (333)
+++-+++.|.. .+++++.++.+++.|++.|-|...+-.. ...++.+.+++.|+.+.
T Consensus 18 ~klg~~~~~~~---~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~ 78 (257)
T 3lmz_A 18 FHLGMAGYTFV---NFDLDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGY 78 (257)
T ss_dssp SEEEECGGGGT---TSCHHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEE
T ss_pred eEEEEEEEeec---CCCHHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 55555444433 3699999999999999999998653111 12456677788898754
No 185
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=28.49 E-value=80 Score=27.45 Aligned_cols=45 Identities=11% Similarity=0.146 Sum_probs=34.5
Q ss_pred CCHHHHHHHHHHcCCcEEEEecCCCCC----CHHHHHHHHHhCCCEEEE
Q 019951 88 LSPSKLVERAHCNGVKVLALTDHDTMS----GIPEAIETARRFGMKIIP 132 (333)
Q Consensus 88 ~sp~eli~~A~~~Gl~~laITDHdt~~----g~~~~~~~a~~~gi~~i~ 132 (333)
.++++.++.+++.|++.|-|.-.+... ...++.+.+++.|+.+..
T Consensus 17 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~ 65 (290)
T 2qul_A 17 VDFPATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMC 65 (290)
T ss_dssp CCHHHHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEE
T ss_pred ccHHHHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEE
Confidence 589999999999999999998654322 244566777888998665
No 186
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=28.42 E-value=38 Score=31.48 Aligned_cols=65 Identities=22% Similarity=0.258 Sum_probs=39.8
Q ss_pred HHHHhCCEEEEeCCCCCCCcHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHH--HHHhhcCCCc-cceeecc
Q 019951 259 LIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVGVIFTL--QDGSLFSLLP-LTVLFGH 326 (333)
Q Consensus 259 ~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~--~~a~~~~l~~-~~~~~~~ 326 (333)
++...++++|+ |-+ ++...+++.+.+.|+|+|-+-....+........ +.+-+.||+| .++++|.
T Consensus 235 i~~~~~~~~ii-h~~--g~~~~~l~~~~~~g~d~i~~d~~~~~~~~~k~~~g~~~~l~Gnldp~~~l~~g~ 302 (348)
T 4ay7_A 235 FASSVNSVTVL-HIC--GNVNPILSDMADCGFEGLSVEEKIGSAKKGKEVIGTRARLVGNVSSPFTLLPGP 302 (348)
T ss_dssp HHHHSSSEEEE-ECC--SCCHHHHHHHHTSCCSEEECCGGGCCHHHHHHHHTTSSEEEEEECCCCCCTTCC
T ss_pred HHhhccCCcEE-Eec--CCcHHHHHHHHHhccccccccchhhHHHHHHHHhCCCEEEEcCCCChHhhcCCC
Confidence 34455677766 544 2446789999999999987654444444443322 3456677866 4455553
No 187
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=28.28 E-value=38 Score=28.23 Aligned_cols=28 Identities=29% Similarity=0.239 Sum_probs=20.9
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEecCC
Q 019951 84 SDGYLSPSKLVERAHCNGVKVLALTDHD 111 (333)
Q Consensus 84 SDG~~sp~eli~~A~~~Gl~~laITDHd 111 (333)
|-.+-.+-++++.|+++|.+.++||+..
T Consensus 119 SG~t~~~i~~~~~ak~~g~~vI~IT~~~ 146 (196)
T 2yva_A 119 RGNSRDIVKAVEAAVTRDMTIVALTGYD 146 (196)
T ss_dssp SSCCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 3334556778888889999999998854
No 188
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=27.43 E-value=95 Score=28.90 Aligned_cols=66 Identities=8% Similarity=-0.078 Sum_probs=42.3
Q ss_pred CCHHHHHHHHHHh-CCE--EEEeCCCCCCCcHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHhhcCCC
Q 019951 251 PLAEVAVQLIHRT-GGL--AVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVGVIFTLQDGSLFSLL 318 (333)
Q Consensus 251 ~~~eevI~~I~~a-GGv--aVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~~~a~~~~l~ 318 (333)
.+..+.++.+.+. .++ .+|..|.+. ....++.+.+.|+|+|-++-+.+..+....+.++|+++|+.
T Consensus 67 ~~~~e~l~~i~~~~~~~~i~~l~~p~~~--~~~~i~~a~~aGvd~v~I~~~~s~~~~~~~~i~~ak~~G~~ 135 (345)
T 1nvm_A 67 HTDLEYIEAVAGEISHAQIATLLLPGIG--SVHDLKNAYQAGARVVRVATHCTEADVSKQHIEYARNLGMD 135 (345)
T ss_dssp SCHHHHHHHHHTTCSSSEEEEEECBTTB--CHHHHHHHHHHTCCEEEEEEETTCGGGGHHHHHHHHHHTCE
T ss_pred CCHHHHHHHHHhhCCCCEEEEEecCCcc--cHHHHHHHHhCCcCEEEEEEeccHHHHHHHHHHHHHHCCCE
Confidence 3456677666554 333 333345431 24567777888888888877666666777778888888763
No 189
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=27.36 E-value=1e+02 Score=26.98 Aligned_cols=44 Identities=14% Similarity=0.067 Sum_probs=31.4
Q ss_pred HHHHHHHHHhCCEEEEeCCC-CCCCcHHHHHHHHHcCCCEEEEeCC
Q 019951 254 EVAVQLIHRTGGLAVLAHPW-ALKNPAAIIRKLKDVGLHGLEVYRS 298 (333)
Q Consensus 254 eevI~~I~~aGGvaVLAHP~-~~~~~~~li~~l~~~GlDGIEv~~~ 298 (333)
.+.|+.+|++| +.|.+.-- .+.+..+.+..+.++|+|||-.-+|
T Consensus 202 ~~~v~~~~~~G-~~v~~wTv~~~~n~~~~~~~l~~~GvdgI~TD~p 246 (258)
T 2o55_A 202 KEQVCTAHEKG-LSVTVWMPWIFDDSEEDWKKCLELQVDLICSNYP 246 (258)
T ss_dssp HHHHHHHHHTT-CEEEEECCTTCCCCHHHHHHHHHHTCSEEEESCH
T ss_pred HHHHHHHHHCC-CEEEEeeCCCCCCCHHHHHHHHHcCCCEEEeCCH
Confidence 57899999886 55655432 2234567788999999999976554
No 190
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=27.10 E-value=84 Score=27.68 Aligned_cols=71 Identities=8% Similarity=-0.040 Sum_probs=44.0
Q ss_pred HHHHHHHHhCC--EEEEeCCCCC-CCcHHHHHHHH-HcCCCEEEEeCCCC----CHHHHHHHHHHHhhcCCCccceeecc
Q 019951 255 VAVQLIHRTGG--LAVLAHPWAL-KNPAAIIRKLK-DVGLHGLEVYRSDG----KLVGVIFTLQDGSLFSLLPLTVLFGH 326 (333)
Q Consensus 255 evI~~I~~aGG--vaVLAHP~~~-~~~~~li~~l~-~~GlDGIEv~~~~~----~~~~~~~~~~~a~~~~l~~~~~~~~~ 326 (333)
.+.+++.+..+ .++..||... ....+.+++++ +.|+.|||+....+ ....+....+.|.++|+ |..+--|+
T Consensus 79 ~~~~~~~~~p~r~~~~~~~p~~~~~~~~~el~~~~~~~g~~gi~~~~~~~~~~~~~~~~~~~~~~a~~~~l-pv~iH~~~ 157 (307)
T 2f6k_A 79 DGKSLAQQYPDQLGYLASLPIPYELDAVKTVQQALDQDGALGVTVPTNSRGLYFGSPVLERVYQELDARQA-IVALHPNE 157 (307)
T ss_dssp HHHHHHHHCTTTEEEEECCCTTCHHHHHHHHHHHHHTSCCSEEEEESEETTEETTCGGGHHHHHHHHTTTC-EEEEECCC
T ss_pred HHHHHHHhCccceeEEEeCCCCCHHHHHHHHHHHHhccCCcEEEEeccCCCCCCCcHhHHHHHHHHHHcCC-eEEECCCC
Confidence 45566666554 3556676321 11123455555 57999999875432 22456888899999996 77776554
No 191
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=26.80 E-value=1.4e+02 Score=27.88 Aligned_cols=61 Identities=18% Similarity=0.082 Sum_probs=39.7
Q ss_pred HHHHHHHhCCEEEEeCCCCCCC--cHHHHHHHHHcCCCEEEEeCCCC----CHHHH-HHHHHHHh-hcCC
Q 019951 256 AVQLIHRTGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG----KLVGV-IFTLQDGS-LFSL 317 (333)
Q Consensus 256 vI~~I~~aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~----~~~~~-~~~~~~a~-~~~l 317 (333)
+++. ...|.++|+|+-+.... ..++.+.+.++|.||+=+..|+. +.+++ .++.+.|. .-++
T Consensus 84 vi~~-~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~IA~aa~~l 152 (344)
T 2hmc_A 84 GVER-LVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRVLSRGSVIAAQKAHFKAILSAAPEI 152 (344)
T ss_dssp HHHH-HHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCSSSTTCHHHHHHHHHHHHHHSTTS
T ss_pred HHHH-HhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCccCCCCCHHHHHHHHHHHHhhCCCC
Confidence 4444 44577899998776432 23456777888999998887753 33333 66667777 5554
No 192
>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A
Probab=26.76 E-value=1.1e+02 Score=28.32 Aligned_cols=48 Identities=19% Similarity=0.337 Sum_probs=40.4
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCEEEEEEEEe
Q 019951 85 DGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEIS 137 (333)
Q Consensus 85 DG~~sp~eli~~A~~~Gl~~laITDHdt~~g~~~~~~~a~~~gi~~i~GiEis 137 (333)
|-..+|+++++..+.+|++.+=|=|-| ..+.++++..||+++.|+-.+
T Consensus 10 ~nlp~~~~vv~llk~~~i~~VRlY~~d-----~~vL~A~~~tgi~v~lgv~n~ 57 (306)
T 1aq0_A 10 NNLPAASTVVSMFKSNGIKSMRLYAPN-----QAALQAVGGTGINVVVGAPND 57 (306)
T ss_dssp SSCCCHHHHHHHHHHHTCCEEEESSCC-----HHHHHHHTTSCCEEEEEECGG
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEcCCC-----HHHHHHHHhcCCEEEEecccc
Confidence 445799999999999999999998755 566777788999999998754
No 193
>2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A*
Probab=26.54 E-value=77 Score=30.95 Aligned_cols=52 Identities=15% Similarity=0.147 Sum_probs=39.9
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEe---------------cCCCCC------CHHHHHHHHHhCCCEEEEEEEEee
Q 019951 85 DGYLSPSKLVERAHCNGVKVLALT---------------DHDTMS------GIPEAIETARRFGMKIIPGVEIST 138 (333)
Q Consensus 85 DG~~sp~eli~~A~~~Gl~~laIT---------------DHdt~~------g~~~~~~~a~~~gi~~i~GiEis~ 138 (333)
--.+.|++.++.|++.|.+.+.+| ||+.+. =+.++.++|++.||++ |+=+|.
T Consensus 75 p~~fDp~~Wa~~~k~AGakyvvlTaKHHDGF~lwpSk~t~~n~~~~~~krDlv~el~~A~rk~Glk~--GlY~S~ 147 (450)
T 2wvv_A 75 PTKFDAKKWAKMAKEMGTKYVKITTKHHEGFCLWPSKYTKYTVANTPYKRDILGELVKAYNDEGIDV--HFYFSV 147 (450)
T ss_dssp CTTCCHHHHHHHHHHHTCSEEEEEEECTTCCBSSCCTTCSCBGGGSTTCSCHHHHHHHHHHHTTCEE--EEEEES
T ss_pred cccCCHHHHHHHHHHcCCcEEEEEEeecCCccccCCCCCCCccccCCCCCChHHHHHHHHHHcCCeE--EEEecH
Confidence 346899999999999999999987 333321 1457888999999876 777765
No 194
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=26.39 E-value=1.3e+02 Score=27.11 Aligned_cols=35 Identities=14% Similarity=0.184 Sum_probs=19.4
Q ss_pred HHHHHHHHHHhCCEEE-EeCCCCCCCcHHHHHHHHHcCC
Q 019951 253 AEVAVQLIHRTGGLAV-LAHPWALKNPAAIIRKLKDVGL 290 (333)
Q Consensus 253 ~eevI~~I~~aGGvaV-LAHP~~~~~~~~li~~l~~~Gl 290 (333)
.++.++.+++.|=-.| +.-|. .+.+.+..+.+.+-
T Consensus 137 ~~~~~~~~~~~gl~~i~liaP~---t~~eri~~i~~~~~ 172 (267)
T 3vnd_A 137 SAPFSKAAKAHGIAPIFIAPPN---ADADTLKMVSEQGE 172 (267)
T ss_dssp CHHHHHHHHHTTCEEECEECTT---CCHHHHHHHHHHCC
T ss_pred HHHHHHHHHHcCCeEEEEECCC---CCHHHHHHHHHhCC
Confidence 3467777777764333 55453 23456666666543
No 195
>1fjl_A Paired protein; DNA-binding protein, paired BOX, transcription regulation; HET: DNA; 2.00A {Drosophila melanogaster} SCOP: a.4.1.1 PDB: 3a01_B
Probab=26.23 E-value=1.5e+02 Score=21.28 Aligned_cols=24 Identities=17% Similarity=0.174 Sum_probs=17.5
Q ss_pred hhcCCCCCCCCHHHHHHHHHHHHH
Q 019951 20 QKRGGGKKKMTAEQSLAFNSVTEW 43 (333)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~ 43 (333)
+++++++...|.+|...|...++-
T Consensus 16 ~~~rr~Rt~ft~~Q~~~Le~~F~~ 39 (81)
T 1fjl_A 16 RKQRRSRTTFSASQLDELERAFER 39 (81)
T ss_dssp -CCCCCCCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHH
Confidence 344455677899999999988853
No 196
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=26.10 E-value=1e+02 Score=27.67 Aligned_cols=63 Identities=10% Similarity=0.045 Sum_probs=39.8
Q ss_pred HHHHHHHhCCEEEEeCCCCCCCcHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHhhcCCCcc
Q 019951 256 AVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVGVIFTLQDGSLFSLLPL 320 (333)
Q Consensus 256 vI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~~~a~~~~l~~~ 320 (333)
=+..|+++=.++||.--+- -.+. .+.++..+|-|+|=+....-+.+++..+.+.|+++|++++
T Consensus 92 dL~~ir~~v~lPvLrKDfi-~~~~-qi~ea~~~GAD~ilLi~a~l~~~~l~~l~~~a~~lGl~~l 154 (251)
T 1i4n_A 92 FVRAARNLTCRPILAKDFY-IDTV-QVKLASSVGADAILIIARILTAEQIKEIYEAAEELGMDSL 154 (251)
T ss_dssp HHHHHHTTCCSCEEEECCC-CSTH-HHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHhCCCCEEEeeCC-CCHH-HHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHcCCeEE
Confidence 3455555556677653322 1223 3555778888888777776666777777788888777543
No 197
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=26.05 E-value=86 Score=28.44 Aligned_cols=54 Identities=17% Similarity=0.114 Sum_probs=34.3
Q ss_pred CCEEEEeCCCCCCCc--HHHHHHHHHcCCCEEEEeCCCC---CHHHH-HHHHHHHhhcCC
Q 019951 264 GGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDG---KLVGV-IFTLQDGSLFSL 317 (333)
Q Consensus 264 GGvaVLAHP~~~~~~--~~li~~l~~~GlDGIEv~~~~~---~~~~~-~~~~~~a~~~~l 317 (333)
|.++|+|+-+..... .++.+.+.+.|.||+=+..|+. +.++. .++.+.|..-++
T Consensus 69 gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~l 128 (291)
T 3a5f_A 69 KRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSDAVST 128 (291)
T ss_dssp TSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHC-CTGGGCCS
T ss_pred CCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 458888887764322 3456777888999998887753 33433 455556665553
No 198
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=25.52 E-value=1.2e+02 Score=23.28 Aligned_cols=47 Identities=17% Similarity=0.247 Sum_probs=36.9
Q ss_pred hcCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCCCCccccccccccccCCceEEceeeeCcCCCCCCCHHHHHHHHHHc
Q 019951 21 KRGGGKKKMTAEQSLAFNSVTEWVYLDQSHSSSSSEDDFGVHQILNRAVDNNVVFELHSHSNFSDGYLSPSKLVERAHCN 100 (333)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DLH~HT~~SDG~~sp~eli~~A~~~ 100 (333)
.....+..+|.++...|+.++.-++.+ .+|.++++++.......
T Consensus 9 ~~~~~~~~l~~~~~~~l~~~F~~~D~~------------------------------------~~G~i~~~e~~~~l~~~ 52 (161)
T 3fwb_A 9 QSGPLNSELLEEQKQEIYEAFSLFDMN------------------------------------NDGFLDYHELKVAMKAL 52 (161)
T ss_dssp CTTTTTTTSCHHHHHHHHHHHHHHCTT------------------------------------SSSEECHHHHHHHHHHT
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHHCCC------------------------------------CCCcCcHHHHHHHHHHc
Confidence 345566789999999999999776543 47889999999988887
Q ss_pred CCc
Q 019951 101 GVK 103 (333)
Q Consensus 101 Gl~ 103 (333)
|+.
T Consensus 53 ~~~ 55 (161)
T 3fwb_A 53 GFE 55 (161)
T ss_dssp TCC
T ss_pred CCC
Confidence 753
No 199
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=25.35 E-value=85 Score=28.67 Aligned_cols=54 Identities=11% Similarity=0.049 Sum_probs=35.2
Q ss_pred CCEEEEeCCCCCCC--cHHHHHHHHHcCCCEEEEeCCCC---CHHHH-HHHHHHHhhcCC
Q 019951 264 GGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG---KLVGV-IFTLQDGSLFSL 317 (333)
Q Consensus 264 GGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~---~~~~~-~~~~~~a~~~~l 317 (333)
|.++|+|+-+.... ..++.+.+.++|.||+=+..|+. +.++. .++.+.|..-++
T Consensus 72 grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~l 131 (300)
T 3eb2_A 72 RRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILEAYFPLKDAQIESYFRAIADAVEI 131 (300)
T ss_dssp TSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHHCSS
T ss_pred CCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHHCCC
Confidence 55788887664332 24456777888899888887753 33444 666777777663
No 200
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=25.02 E-value=1.9e+02 Score=25.21 Aligned_cols=69 Identities=17% Similarity=0.072 Sum_probs=47.5
Q ss_pred HHHHHHHHHHhCCEEEEeCCCCCCCcHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHhhcCCCccceeecc
Q 019951 253 AEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVGVIFTLQDGSLFSLLPLTVLFGH 326 (333)
Q Consensus 253 ~eevI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 326 (333)
..++++.+.+.+=++|+-.... ....++++.+.+.|++-||+-.. ++.......+++++|. ...+..|-
T Consensus 16 ~~~~~~~l~~~~ii~V~r~~~~-~~~~~~~~al~~gGv~~iel~~k--~~~~~~~i~~l~~~~~--~~~igagt 84 (225)
T 1mxs_A 16 AARIDAICEKARILPVITIARE-EDILPLADALAAGGIRTLEVTLR--SQHGLKAIQVLREQRP--ELCVGAGT 84 (225)
T ss_dssp HHHHHHHHHHHSEEEEECCSCG-GGHHHHHHHHHHTTCCEEEEESS--STHHHHHHHHHHHHCT--TSEEEEEC
T ss_pred HHHHHHHHHHCCEEEEEeCCCH-HHHHHHHHHHHHCCCCEEEEecC--CccHHHHHHHHHHhCc--ccEEeeCe
Confidence 4567888999998899876421 22356889999999999999853 3444455556888873 34444443
No 201
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=24.99 E-value=41 Score=27.70 Aligned_cols=24 Identities=13% Similarity=0.087 Sum_probs=18.4
Q ss_pred CCCHHHHHHHHHHcCCcEEEEecC
Q 019951 87 YLSPSKLVERAHCNGVKVLALTDH 110 (333)
Q Consensus 87 ~~sp~eli~~A~~~Gl~~laITDH 110 (333)
+-.+-++++.|+++|.+.++||+.
T Consensus 123 t~~~~~~~~~ak~~g~~vi~iT~~ 146 (188)
T 1tk9_A 123 SPNVLEALKKAKELNMLCLGLSGK 146 (188)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEG
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 344567788888888888888885
No 202
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=24.90 E-value=48 Score=27.33 Aligned_cols=26 Identities=23% Similarity=-0.033 Sum_probs=21.3
Q ss_pred CCCHHHHHHHHHHcCCcEEEEecCCC
Q 019951 87 YLSPSKLVERAHCNGVKVLALTDHDT 112 (333)
Q Consensus 87 ~~sp~eli~~A~~~Gl~~laITDHdt 112 (333)
+-..-++++.|+++|.+.++||+...
T Consensus 92 t~~~~~~~~~ak~~g~~vi~IT~~~~ 117 (186)
T 1m3s_A 92 TKSLIHTAAKAKSLHGIVAALTINPE 117 (186)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred cHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 34566789999999999999999643
No 203
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9
Probab=24.88 E-value=73 Score=30.45 Aligned_cols=41 Identities=22% Similarity=0.291 Sum_probs=25.4
Q ss_pred HHHHHHcCCcEEEEecCCCCC--CHHHHHHHHHhCCCEEEEEEEE
Q 019951 94 VERAHCNGVKVLALTDHDTMS--GIPEAIETARRFGMKIIPGVEI 136 (333)
Q Consensus 94 i~~A~~~Gl~~laITDHdt~~--g~~~~~~~a~~~gi~~i~GiEi 136 (333)
+..+.+.|+..+.- +.+.. .+..+.+.+++.+++++.|..+
T Consensus 124 ~~~~l~~GvTtv~~--~~~~~~~~~~~~~~~~~~~g~r~~~g~~~ 166 (475)
T 2ood_A 124 LDALLAAGTTTCQA--FTSSSPVATEELFEEASRRNMRVIAGLTG 166 (475)
T ss_dssp HHHHHHTTEEEEEE--ECCSSHHHHHHHHHHHHHHTCCEEECCEE
T ss_pred HHHHHhcCceEEEE--ecccCchhHHHHHHHHHHcCCeEEEEeee
Confidence 67888999887764 32221 2344455666778877766544
No 204
>2zuv_A Lacto-N-biose phosphorylase; beta-alpha-barrel, TIM barrel, glycosyltransferase, transferase; HET: NDG; 1.85A {Bifidobacterium longum} PDB: 2zus_A* 2zuu_A* 2zut_A* 2zuw_A*
Probab=24.82 E-value=52 Score=34.29 Aligned_cols=39 Identities=18% Similarity=0.414 Sum_probs=22.9
Q ss_pred HHHHHHHHHHhCCEEE--EeCCCCCCCcHHHHHHHHHcCCCEE
Q 019951 253 AEVAVQLIHRTGGLAV--LAHPWALKNPAAIIRKLKDVGLHGL 293 (333)
Q Consensus 253 ~eevI~~I~~aGGvaV--LAHP~~~~~~~~li~~l~~~GlDGI 293 (333)
+.+.|+++|++|--|. |---|- ..++..+.+.+.|||||
T Consensus 293 ~k~lvd~~H~~gKeAmmFlgD~WI--GtEPy~~~F~~iGlDav 333 (759)
T 2zuv_A 293 VKQLADMSHAAGKEAMMFLGDQWI--GTEPYKDGFDELGLDAV 333 (759)
T ss_dssp HHHHHHHHHHTTCEEEEEESSSCT--TTCTTSTTGGGGCCCEE
T ss_pred HHHHHHHHHhcCceeEEeccCcee--ccccchhhhhhcCCceE
Confidence 7899999999998755 332221 11223344555566554
No 205
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=24.70 E-value=91 Score=27.40 Aligned_cols=41 Identities=27% Similarity=0.277 Sum_probs=30.3
Q ss_pred HHHHHHHHHhCCEEEEeCCCCCCCcHHHHHHHHHcCCCEEEEeCC
Q 019951 254 EVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRS 298 (333)
Q Consensus 254 eevI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~ 298 (333)
.+.|+.+|++| +.|.++ .. +..+.+..+.++|+|||-.-+|
T Consensus 200 ~~~v~~~~~~G-~~v~~W--Tv-n~~~~~~~l~~~GVdgIiTD~P 240 (252)
T 3qvq_A 200 VQQVSDIKAAG-YKVLAF--TI-NDESLALKLYNQGLDAVFSDYP 240 (252)
T ss_dssp HHHHHHHHHTT-CEEEEE--CC-CCHHHHHHHHHTTCCEEEESSH
T ss_pred HHHHHHHHHCC-CEEEEE--cC-CCHHHHHHHHHcCCCEEEeCCH
Confidence 57889998885 666654 33 3457788999999999977654
No 206
>2uyg_A 3-dehydroquinate dehydratase; typeii 3-dehydroquinase, lyase; 2.2A {Thermus thermophilus}
Probab=24.68 E-value=91 Score=26.05 Aligned_cols=47 Identities=17% Similarity=0.236 Sum_probs=37.6
Q ss_pred HHHHHHHHHHhCCE---EEEeCCCCCC-CcHHHHHHHHHcCCCEEEEeCCC
Q 019951 253 AEVAVQLIHRTGGL---AVLAHPWALK-NPAAIIRKLKDVGLHGLEVYRSD 299 (333)
Q Consensus 253 ~eevI~~I~~aGGv---aVLAHP~~~~-~~~~li~~l~~~GlDGIEv~~~~ 299 (333)
-.+.|+.||++.+- .|+=-|+.|. .+..+.+.+...++--|||.=|.
T Consensus 52 EgeLId~Ih~a~~~~~dgiIINpgA~THtSvAlrDAl~~v~~P~VEVHiSN 102 (149)
T 2uyg_A 52 EGQLIEWVQQAHQEGFLAIVLNPGALTHYSYALLDAIRAQPLPVVEVHLTN 102 (149)
T ss_dssp HHHHHHHHHHTTTTTCSEEEEECGGGGGTCHHHHHHHHTSCSCEEEEESSC
T ss_pred HHHHHHHHHHhccCCeeEEEEccchhccccHHHHHHHHhCCCCEEEEEecC
Confidence 35899999999653 6666799885 45788899999999999999653
No 207
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=24.50 E-value=1.2e+02 Score=26.58 Aligned_cols=58 Identities=21% Similarity=0.359 Sum_probs=42.3
Q ss_pred ceEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCEEEEEEEEee
Q 019951 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEIST 138 (333)
Q Consensus 72 ~~~~DLH~HT~~SDG~~sp~eli~~A~~~Gl~~laITDHdt~~g~~~~~~~a~~~gi~~i~GiEis~ 138 (333)
...+|.|+++ .+|+.+++.+.+.|.+.+.+-- ....-..+..+.+++.|+++ |+.+..
T Consensus 64 ~~~~dvhLmv------~~p~~~i~~~~~aGad~itvH~-Ea~~~~~~~i~~i~~~G~k~--gval~p 121 (228)
T 3ovp_A 64 DPFFDMHMMV------SKPEQWVKPMAVAGANQYTFHL-EATENPGALIKDIRENGMKV--GLAIKP 121 (228)
T ss_dssp SSCEEEEEEC------SCGGGGHHHHHHHTCSEEEEEG-GGCSCHHHHHHHHHHTTCEE--EEEECT
T ss_pred CCcEEEEEEe------CCHHHHHHHHHHcCCCEEEEcc-CCchhHHHHHHHHHHcCCCE--EEEEcC
Confidence 4678999985 5678899999999999999932 12233556777778888864 776653
No 208
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=24.38 E-value=1.2e+02 Score=26.87 Aligned_cols=46 Identities=20% Similarity=0.148 Sum_probs=35.2
Q ss_pred CCCHHHHHHHHHHcCCcEEEEecCC------CCCCHHHHHHHHHhCCCEEEE
Q 019951 87 YLSPSKLVERAHCNGVKVLALTDHD------TMSGIPEAIETARRFGMKIIP 132 (333)
Q Consensus 87 ~~sp~eli~~A~~~Gl~~laITDHd------t~~g~~~~~~~a~~~gi~~i~ 132 (333)
..++++.++.|++.|++.|-|.-.+ .-....++.+.+++.|+.+..
T Consensus 35 ~~~~~~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 86 (296)
T 2g0w_A 35 EVSFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTE 86 (296)
T ss_dssp TSCHHHHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCEEEE
T ss_pred CCCHHHHHHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCceEe
Confidence 3899999999999999999997531 123456777788889987543
No 209
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=24.23 E-value=86 Score=24.83 Aligned_cols=38 Identities=11% Similarity=-0.059 Sum_probs=29.4
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCEEE
Q 019951 91 SKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKII 131 (333)
Q Consensus 91 ~eli~~A~~~Gl~~laITDHdt~~g~~~~~~~a~~~gi~~i 131 (333)
.++++.|.+.|.+.+-++-= +. -+++.+.|++.||+++
T Consensus 72 ~~~v~e~~~~g~k~v~~~~G--~~-~~e~~~~a~~~Girvv 109 (122)
T 3ff4_A 72 LSEYNYILSLKPKRVIFNPG--TE-NEELEEILSENGIEPV 109 (122)
T ss_dssp GGGHHHHHHHCCSEEEECTT--CC-CHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHhcCCCEEEECCC--CC-hHHHHHHHHHcCCeEE
Confidence 45789999999999877531 11 2678889999999988
No 210
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=24.22 E-value=1e+02 Score=26.99 Aligned_cols=46 Identities=9% Similarity=-0.034 Sum_probs=35.8
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCEEEEE
Q 019951 86 GYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPG 133 (333)
Q Consensus 86 G~~sp~eli~~A~~~Gl~~laITDHdt~~g~~~~~~~a~~~gi~~i~G 133 (333)
..+++++.++.+++.|++.|-|..... ...++.+.+++.|+.+...
T Consensus 29 ~~~~~~~~l~~~~~~G~~~vEl~~~~~--~~~~~~~~l~~~gl~~~~~ 74 (301)
T 3cny_A 29 KDNNLQQLLSDIVVAGFQGTEVGGFFP--GPEKLNYELKLRNLEIAGQ 74 (301)
T ss_dssp TTCCHHHHHHHHHHHTCCEECCCTTCC--CHHHHHHHHHHTTCEECEE
T ss_pred cCCCHHHHHHHHHHhCCCEEEecCCCC--CHHHHHHHHHHCCCeEEEE
Confidence 357899999999999999999983322 5667777888889876554
No 211
>4g9j_C Synthetic peptide, serine/threonine-protein phosphatase PP1-alpha Ca subunit; activating peptide; 3.10A {Homo sapiens}
Probab=24.11 E-value=22 Score=20.38 Aligned_cols=19 Identities=21% Similarity=0.345 Sum_probs=10.5
Q ss_pred hhhhhcCCCCCCCCHHHHH
Q 019951 17 KKKQKRGGGKKKMTAEQSL 35 (333)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~ 35 (333)
+|++||+++..+.|-.+..
T Consensus 2 rkrpkrkrknarvtfaeaa 20 (26)
T 4g9j_C 2 RKRPKRKRKNARVTFAEAA 20 (26)
T ss_pred CcccccccccceeeHHHhh
Confidence 3455555555666655543
No 212
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=24.01 E-value=69 Score=29.59 Aligned_cols=59 Identities=15% Similarity=0.104 Sum_probs=37.0
Q ss_pred eEEceeeeCcCC--CCCCCHHHHHHHHHHcCCcEEEEecC-CCC-C---CHHHHHHHHHhCC-CEEE
Q 019951 73 VVFELHSHSNFS--DGYLSPSKLVERAHCNGVKVLALTDH-DTM-S---GIPEAIETARRFG-MKII 131 (333)
Q Consensus 73 ~~~DLH~HT~~S--DG~~sp~eli~~A~~~Gl~~laITDH-dt~-~---g~~~~~~~a~~~g-i~~i 131 (333)
-.+|.|+|...+ +-...+....+.+.+.|+..+..+=. +.. . .+..+.+.++..+ +.++
T Consensus 50 G~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (426)
T 2z00_A 50 GFLDLHAHLREPGEEVKEDLFSGLLAAVRGGYTDLVSMPNTKPPVDTPEAVRALKEKAKALGLARLH 116 (426)
T ss_dssp CEEEEEECCCTTTCTTTCCHHHHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHTSSEEC
T ss_pred CEEEeccccCCCCCCchHHHHHHHHHHHhCCccEEEecCCCCCCcChHHHHHHHHHHhcccCcccEE
Confidence 378999998764 12346778889999999998766432 111 1 2334445555556 6653
No 213
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=23.80 E-value=49 Score=27.10 Aligned_cols=26 Identities=12% Similarity=0.069 Sum_probs=21.3
Q ss_pred CCCHHHHHHHHHHcCCcEEEEecCCC
Q 019951 87 YLSPSKLVERAHCNGVKVLALTDHDT 112 (333)
Q Consensus 87 ~~sp~eli~~A~~~Gl~~laITDHdt 112 (333)
+-..-++++.|+++|.+.++||+...
T Consensus 109 t~~~~~~~~~ak~~g~~vi~IT~~~~ 134 (183)
T 2xhz_A 109 SSEITALIPVLKRLHVPLICITGRPE 134 (183)
T ss_dssp CHHHHHHHHHHHTTTCCEEEEESCTT
T ss_pred CHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 44566789999999999999999643
No 214
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=23.78 E-value=2.3e+02 Score=25.72 Aligned_cols=69 Identities=7% Similarity=-0.013 Sum_probs=38.7
Q ss_pred HHHHHHHhCC--EEEEeCCCCC----CCcHHHHHHHH-HcCCCEEEEeCCC---------CCHHHHHHHHHHHhhcCCCc
Q 019951 256 AVQLIHRTGG--LAVLAHPWAL----KNPAAIIRKLK-DVGLHGLEVYRSD---------GKLVGVIFTLQDGSLFSLLP 319 (333)
Q Consensus 256 vI~~I~~aGG--vaVLAHP~~~----~~~~~li~~l~-~~GlDGIEv~~~~---------~~~~~~~~~~~~a~~~~l~~ 319 (333)
+.+++.+..+ +++..||... ....+.|+.+. +.|+.|||+.... -....+....+.|.++|+ |
T Consensus 96 ~~~~~~~~p~rf~~~~~~p~~~~~~~~~a~~eL~r~~~~~g~~Gv~l~~~~~~~~~~~~~l~d~~~~p~~~~a~e~~l-p 174 (350)
T 2gwg_A 96 CYRVSQLFPDNFIGAAMLPQSPGVDPKTCIPELEKCVKEYGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKMVELEI-P 174 (350)
T ss_dssp HHHHHHHSTTTEEEEEECCCCTTSCGGGGHHHHHHHHHTSCCCEEEECSCTTSSCCCSCCTTSGGGHHHHHHHHHHTC-C
T ss_pred HHHHHHhCCCcEEEEEeCCCCCCCCHHHHHHHHHHHHhccCCeEEEECCCCCCccCCCCCCCCHHHHHHHHHHHHcCC-e
Confidence 4445555444 2445556421 12234455555 6799999885431 122345777888888886 6
Q ss_pred cceeec
Q 019951 320 LTVLFG 325 (333)
Q Consensus 320 ~~~~~~ 325 (333)
..+--|
T Consensus 175 v~iH~~ 180 (350)
T 2gwg_A 175 AMIHVS 180 (350)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 555443
No 215
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=23.60 E-value=52 Score=27.28 Aligned_cols=24 Identities=13% Similarity=0.191 Sum_probs=18.4
Q ss_pred CCHHHHHHHHHHcCCcEEEEecCC
Q 019951 88 LSPSKLVERAHCNGVKVLALTDHD 111 (333)
Q Consensus 88 ~sp~eli~~A~~~Gl~~laITDHd 111 (333)
-.+-++++.|+++|.+.++||+..
T Consensus 130 ~~~~~~~~~ak~~g~~vI~IT~~~ 153 (198)
T 2xbl_A 130 PNILAAFREAKAKGMTCVGFTGNR 153 (198)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSC
T ss_pred HHHHHHHHHHHHCCCeEEEEECCC
Confidence 445677888888888888888853
No 216
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=23.50 E-value=1.2e+02 Score=25.46 Aligned_cols=41 Identities=22% Similarity=0.344 Sum_probs=30.6
Q ss_pred CCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCEEEEEE
Q 019951 88 LSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGV 134 (333)
Q Consensus 88 ~sp~eli~~A~~~Gl~~laITDHdt~~g~~~~~~~a~~~gi~~i~Gi 134 (333)
.++++ ++.|.+.|.+++ +..... .++.+.+++.|+.+++|+
T Consensus 71 ~~~~~-~~~a~~~Gad~i-v~~~~~----~~~~~~~~~~g~~vi~g~ 111 (205)
T 1wa3_A 71 TSVEQ-CRKAVESGAEFI-VSPHLD----EEISQFCKEKGVFYMPGV 111 (205)
T ss_dssp CSHHH-HHHHHHHTCSEE-ECSSCC----HHHHHHHHHHTCEEECEE
T ss_pred CCHHH-HHHHHHcCCCEE-EcCCCC----HHHHHHHHHcCCcEECCc
Confidence 36766 588888999999 654322 567778888899999865
No 217
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=23.42 E-value=97 Score=27.07 Aligned_cols=69 Identities=10% Similarity=0.030 Sum_probs=0.0
Q ss_pred HHHHHHHHHhCC-E--EEEeCCCCCCCcHHHHHHHHHcCCCEEEEeCCCC-----CHHHHHHHHHHHhhcCCCccceeec
Q 019951 254 EVAVQLIHRTGG-L--AVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDG-----KLVGVIFTLQDGSLFSLLPLTVLFG 325 (333)
Q Consensus 254 eevI~~I~~aGG-v--aVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~-----~~~~~~~~~~~a~~~~l~~~~~~~~ 325 (333)
+.+++++.+..+ + .+..||..- .+.|+++.+.|+.||++..... ....+....+.|.++|+ |..+-.|
T Consensus 70 ~~~~~~~~~~p~r~~~~~~v~p~~~---~~el~~~~~~g~~Gi~~~~~~~~~~~~~~~~~~~~~~~a~~~~l-pv~iH~~ 145 (288)
T 2ffi_A 70 RYLLSALQTVPGQLRGVVMLERDVE---QATLAEMARLGVRGVRLNLMGQDMPDLTGAQWRPLLERIGEQGW-HVELHRQ 145 (288)
T ss_dssp HHHHHHHHHSTTTBCCBBCCCSSCC---HHHHHHHHTTTCCEEECCCSSSCCCCTTSTTTHHHHHHHHHHTC-EEEECSC
T ss_pred HHHHHHHHHCCCCEEEEEEeCCCCC---HHHHHHHHHCCCeEEEEecccCCCCCcccHHHHHHHHHHHHCCC-eEEEeec
Q ss_pred c
Q 019951 326 H 326 (333)
Q Consensus 326 ~ 326 (333)
.
T Consensus 146 ~ 146 (288)
T 2ffi_A 146 V 146 (288)
T ss_dssp T
T ss_pred h
No 218
>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3
Probab=23.38 E-value=2.2e+02 Score=26.27 Aligned_cols=48 Identities=21% Similarity=0.331 Sum_probs=40.3
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCEEEEEEEEe
Q 019951 85 DGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEIS 137 (333)
Q Consensus 85 DG~~sp~eli~~A~~~Gl~~laITDHdt~~g~~~~~~~a~~~gi~~i~GiEis 137 (333)
+-.-+|+++++..+..|++.+=|=|-| ..+.++++..||+++.|+-.+
T Consensus 10 ~~~ps~~~vv~llk~~~i~~vRlY~~d-----~~vl~A~~~tgi~v~lgv~n~ 57 (312)
T 2cyg_A 10 NNLPPPSEVVSLYKSNNIARMRLYDPN-----QAALQALRNSNIQVLLDVPRS 57 (312)
T ss_dssp SSCCCHHHHHHHHHHTTCCEEEESSCC-----HHHHHHHTTSCCEEEEEECHH
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEcCCC-----HHHHHHHHhcCCEEEEecccc
Confidence 336789999999999999999998865 566777888999999999754
No 219
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=23.34 E-value=93 Score=28.10 Aligned_cols=64 Identities=11% Similarity=-0.018 Sum_probs=45.3
Q ss_pred CHHHHHHHHHHhCCEEEEeCCCCCCCcHHHHHHHHHcCCCEEEEeCCC----------CCHH----HHHHHHHHHhhcCC
Q 019951 252 LAEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSD----------GKLV----GVIFTLQDGSLFSL 317 (333)
Q Consensus 252 ~~eevI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~----------~~~~----~~~~~~~~a~~~~l 317 (333)
...++++.|.+..++.+.+|- .+ ...++.+.+.|++.|-++-+. .+.+ ....+.++|++.|+
T Consensus 59 ~~~e~~~~i~~~~~~~v~~l~---~n-~~~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~ 134 (295)
T 1ydn_A 59 DSREVMAGIRRADGVRYSVLV---PN-MKGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGL 134 (295)
T ss_dssp THHHHHHHSCCCSSSEEEEEC---SS-HHHHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHhCCCCEEEEEe---CC-HHHHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCC
Confidence 456777877766677777763 12 567888999999999988432 2333 33667899999998
Q ss_pred Cc
Q 019951 318 LP 319 (333)
Q Consensus 318 ~~ 319 (333)
..
T Consensus 135 ~V 136 (295)
T 1ydn_A 135 AI 136 (295)
T ss_dssp EE
T ss_pred eE
Confidence 43
No 220
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=23.29 E-value=39 Score=29.31 Aligned_cols=56 Identities=16% Similarity=0.071 Sum_probs=38.9
Q ss_pred eEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCC-----CCCHHHHHHHHHhCCCEEE
Q 019951 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDT-----MSGIPEAIETARRFGMKII 131 (333)
Q Consensus 73 ~~~DLH~HT~~SDG~~sp~eli~~A~~~Gl~~laITDHdt-----~~g~~~~~~~a~~~gi~~i 131 (333)
|++-++. +.+ ..+++++.++.+++.|++.|-|.-.+. -....++.+.+++.|+.+.
T Consensus 4 Mk~~~~~-~~~--~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~~~ 64 (281)
T 3u0h_A 4 MEPCLHP-TLV--DETSLVLYLDLARETGYRYVDVPFHWLEAEAERHGDAAVEAMFQRRGLVLA 64 (281)
T ss_dssp CEEEECG-GGT--TCCCHHHHHHHHHHTTCSEECCCHHHHHHHHHHHCHHHHHHHHHTTTCEEC
T ss_pred chhhhcc-hhc--cCCCHHHHHHHHHHcCCCEEEecHHHHHHHhcccCHHHHHHHHHHcCCceE
Confidence 5555554 333 347899999999999999998875431 1235566777788898753
No 221
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=23.24 E-value=2.9e+02 Score=23.34 Aligned_cols=69 Identities=9% Similarity=0.021 Sum_probs=38.5
Q ss_pred HHHHHHHHHHhCCEEEEeCCCCC----C---CcHHHHHHHHHcCCCEEEEeCCCCCHHHH---HHHHHHHhhcCCCccce
Q 019951 253 AEVAVQLIHRTGGLAVLAHPWAL----K---NPAAIIRKLKDVGLHGLEVYRSDGKLVGV---IFTLQDGSLFSLLPLTV 322 (333)
Q Consensus 253 ~eevI~~I~~aGGvaVLAHP~~~----~---~~~~li~~l~~~GlDGIEv~~~~~~~~~~---~~~~~~a~~~~l~~~~~ 322 (333)
.+++++.+.+.|...-+.++... . ....+++.+.+.|+- +-+-+..|.+.+. ..+.++++++|+.+..+
T Consensus 141 ~~~~~~~~~~~g~~iEvn~~~~~~~~~g~~~~~~~~~~~~~~~g~~-~~~gSDaH~~~~~g~~~~~~~~~~~~g~~~~~i 219 (245)
T 1m65_A 141 VKAVAEAAAKHQVALEINNSSFLHSRKGSEDNCREVAAAVRDAGGW-VALGSDSHTAFTMGEFEECLKILDAVDFPPERI 219 (245)
T ss_dssp HHHHHHHHHHHTCEEEEETTC----------CHHHHHHHHHHHTCC-EEEECCBSSGGGTTCCHHHHHHHHHTTCCGGGB
T ss_pred HHHHHHHHHHcCCEEEEECCCCcccCCCCCCchHHHHHHHHHcCCE-EEEECCCCChHHHhhHHHHHHHHHHCCCCeEEE
Confidence 45666766666633223333221 1 114456666677776 5566666766554 56666777777755544
No 222
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=23.10 E-value=1.2e+02 Score=26.00 Aligned_cols=56 Identities=18% Similarity=0.211 Sum_probs=39.6
Q ss_pred eEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCC-------------CC--CHHHHHHHHHhCCCEEE
Q 019951 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDT-------------MS--GIPEAIETARRFGMKII 131 (333)
Q Consensus 73 ~~~DLH~HT~~SDG~~sp~eli~~A~~~Gl~~laITDHdt-------------~~--g~~~~~~~a~~~gi~~i 131 (333)
|++-+.+.|... .++++.++.+++.|++.|=|...+. +. ...++.+.+++.|+.+.
T Consensus 10 mklg~~~~~~~~---~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~ 80 (262)
T 3p6l_A 10 WRLGMQSYSFHL---FPLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIV 80 (262)
T ss_dssp EEEEEEGGGGTT---SCHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEE
T ss_pred cEEEEEecccCC---CCHHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEE
Confidence 666665555432 5899999999999999999985321 11 13566777788999753
No 223
>2da2_A Alpha-fetoprotein enhancer binding protein; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics; NMR {Homo sapiens}
Probab=23.01 E-value=1.9e+02 Score=19.93 Aligned_cols=22 Identities=9% Similarity=0.065 Sum_probs=16.7
Q ss_pred cCCCCCCCCHHHHHHHHHHHHH
Q 019951 22 RGGGKKKMTAEQSLAFNSVTEW 43 (333)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~ 43 (333)
+++++...|.+|...|...++-
T Consensus 7 ~rr~Rt~ft~~q~~~Le~~F~~ 28 (70)
T 2da2_A 7 GRSSRTRFTDYQLRVLQDFFDA 28 (70)
T ss_dssp SCCCCCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHc
Confidence 3445667899999999988853
No 224
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=22.99 E-value=1.6e+02 Score=25.49 Aligned_cols=67 Identities=13% Similarity=0.015 Sum_probs=46.0
Q ss_pred HHHHHHHHhCCEEEEeCCCCCCCcHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHhhcCCCccceeecc
Q 019951 255 VAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVGVIFTLQDGSLFSLLPLTVLFGH 326 (333)
Q Consensus 255 evI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 326 (333)
++++.+.+.+=++|+-.... ....++++.+.+.|++-||+-... +.......+++++|. ...+..|-
T Consensus 8 ~~~~~l~~~~~i~v~r~~~~-~~~~~~~~al~~gGv~~iel~~k~--~~~~~~i~~l~~~~~--~~~vgagt 74 (214)
T 1wbh_A 8 SAESILTTGPVVPVIVVKKL-EHAVPMAKALVAGGVRVLNVTLRT--ECAVDAIRAIAKEVP--EAIVGAGT 74 (214)
T ss_dssp CHHHHHHSCSEEEEECCSSG-GGHHHHHHHHHHTTCCEEEEESCS--TTHHHHHHHHHHHCT--TSEEEEES
T ss_pred HHHHHHHHCCEEEEEECCCH-HHHHHHHHHHHHcCCCEEEEeCCC--hhHHHHHHHHHHHCc--CCEEeeCE
Confidence 46788888888899976432 223568899999999999999543 333445555888874 34454554
No 225
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=22.97 E-value=1.3e+02 Score=26.24 Aligned_cols=42 Identities=17% Similarity=0.205 Sum_probs=31.2
Q ss_pred HHHHHHHHHhCCEEEEeCCCCCCCcHHHHHHHHHcCCCEEEEeCCC
Q 019951 254 EVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSD 299 (333)
Q Consensus 254 eevI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~ 299 (333)
.+.|+.+|++| +.|.+. ..+ ..+.+..+.++|+|||-.-+|.
T Consensus 197 ~~~v~~~~~~G-~~v~~w--Tvn-~~~~~~~l~~~GvdgI~TD~p~ 238 (247)
T 2otd_A 197 KARVMQLKDAG-LRILVY--TVN-KPQHAAELLRWGVDCICTDAID 238 (247)
T ss_dssp HHHHHHHHHTT-CEEEEE--CCC-CHHHHHHHHHHTCSEEEESCTT
T ss_pred HHHHHHHHHCC-CEEEEE--ccC-CHHHHHHHHHcCCCEEEeCCHH
Confidence 57889999876 666553 333 3567888999999999887764
No 226
>1f07_A Coenzyme F420-dependent N5,N10- methylenetetrahydromethanopterin reductase; (beta, alpha)8 barrel; HET: MPO; 2.00A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.1.16.3
Probab=22.67 E-value=1.2e+02 Score=27.31 Aligned_cols=47 Identities=28% Similarity=0.193 Sum_probs=31.1
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCC-HHHHHHHHH-hCCCEEEEEEEE
Q 019951 90 PSKLVERAHCNGVKVLALTDHDTMSG-IPEAIETAR-RFGMKIIPGVEI 136 (333)
Q Consensus 90 p~eli~~A~~~Gl~~laITDHdt~~g-~~~~~~~a~-~~gi~~i~GiEi 136 (333)
.-++++.|.+.|++.+-++||..... +.-+...+. -..|++-+|+=+
T Consensus 16 ~~~~a~~AE~~Gfd~~w~~eh~~~~~p~~~la~~Aa~T~rI~lgt~v~~ 64 (321)
T 1f07_A 16 IVKLVKLAEDVGFEYAWITDHYNNKNVYETLALIAEGTETIKLGPGVTN 64 (321)
T ss_dssp HHHHHHHHHHTTCCEEEECCCTTSSCHHHHHHHHHHTCSSCEEEESSBC
T ss_pred HHHHHHHHHHcCCCEEEecccccCCCHHHHHHHHHHhCCcceEeeeeec
Confidence 34567778899999999999975533 222222233 356888887643
No 227
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=22.66 E-value=1e+02 Score=28.06 Aligned_cols=62 Identities=10% Similarity=0.085 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHhCCEEEEeCCCCCCCcHHHHHHHHHcCCCEEEEeCCCCCH--------------HHHHHHHHHHhhcCC
Q 019951 252 LAEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKL--------------VGVIFTLQDGSLFSL 317 (333)
Q Consensus 252 ~~eevI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~~~--------------~~~~~~~~~a~~~~l 317 (333)
+.++++..+.+..++.+.+|- ...+.++.+.+.|++.|-++-+..+. +....+.++|+++|+
T Consensus 63 d~~~~~~~~~~~~~~~~~~l~----~~~~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~ 138 (302)
T 2ftp_A 63 GSAEVFAGIRQRPGVTYAALA----PNLKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQV 138 (302)
T ss_dssp THHHHHHHSCCCTTSEEEEEC----CSHHHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHhhhcCCCEEEEEe----CCHHHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCC
No 228
>2dmt_A Homeobox protein BARH-like 1; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.65 E-value=1.2e+02 Score=21.70 Aligned_cols=23 Identities=17% Similarity=0.087 Sum_probs=17.0
Q ss_pred hcCCCCCCCCHHHHHHHHHHHHH
Q 019951 21 KRGGGKKKMTAEQSLAFNSVTEW 43 (333)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~ 43 (333)
++++++...|.+|...|...++-
T Consensus 16 ~~rr~Rt~ft~~Q~~~Le~~F~~ 38 (80)
T 2dmt_A 16 KGRRSRTVFTELQLMGLEKRFEK 38 (80)
T ss_dssp CCCCSCCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHh
Confidence 33455667899999999988853
No 229
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=22.57 E-value=2.2e+02 Score=25.01 Aligned_cols=52 Identities=15% Similarity=0.155 Sum_probs=36.6
Q ss_pred eeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCC---------CCCHHHHHHHHHhCCCE
Q 019951 77 LHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDT---------MSGIPEAIETARRFGMK 129 (333)
Q Consensus 77 LH~HT~~SDG~~sp~eli~~A~~~Gl~~laITDHdt---------~~g~~~~~~~a~~~gi~ 129 (333)
|=+|+....+ .++++.++.|++.|++.+-|...+. -....++.+.+++.|+.
T Consensus 8 lG~~~~~~~~-~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 68 (303)
T 3aal_A 8 IGSHVSMSGK-KMLLAASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAHGIE 68 (303)
T ss_dssp EEEECCCCTT-TTHHHHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHTTCC
T ss_pred eceeeecCCC-ccHHHHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHcCCc
Confidence 4456655433 4899999999999999999943221 12356777778888984
No 230
>1z69_A COG2141, coenzyme F420-dependent N(5),N(10)- methylenetetrahydromethanopterin reductase; (alpha, beta)8 barrel, oxidoreductase; HET: F42 1PG; 2.61A {Methanosarcina barkeri}
Probab=22.57 E-value=1.3e+02 Score=27.23 Aligned_cols=49 Identities=22% Similarity=0.153 Sum_probs=32.4
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCC-HHHHHHHHH-hCCCEEEEEEEEee
Q 019951 90 PSKLVERAHCNGVKVLALTDHDTMSG-IPEAIETAR-RFGMKIIPGVEIST 138 (333)
Q Consensus 90 p~eli~~A~~~Gl~~laITDHdt~~g-~~~~~~~a~-~~gi~~i~GiEis~ 138 (333)
.-++++.|.+.|++.+-++||..... +.-+...+. -..|++.+|+=+..
T Consensus 16 ~~~~A~~AE~~Gfd~~w~~eh~~~~dp~~~laalAa~T~rI~lgt~v~~~~ 66 (327)
T 1z69_A 16 IAYYAKLSEQQGFDHVWITDHYNNRDVYSTLTVLALNTNSIKIGPGVTNSY 66 (327)
T ss_dssp HHHHHHHHHHTTCSEEEECCCTTSSCHHHHHHHHHHTCSSSEEEESCEESS
T ss_pred HHHHHHHHHHCCCCEEEecccccccCHHHHHHHHHHhCCcceEeeeeccCC
Confidence 34567778899999999999975432 222222233 35688888776554
No 231
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=22.55 E-value=88 Score=30.43 Aligned_cols=35 Identities=11% Similarity=-0.009 Sum_probs=26.4
Q ss_pred HHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHh
Q 019951 279 AAIIRKLKDVGLHGLEVYRSDGKLVGVIFTLQDGS 313 (333)
Q Consensus 279 ~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~~~a~ 313 (333)
..+++.|.++|++-||+-+|..++.+...+..+++
T Consensus 64 l~Ia~~L~~~Gv~~IEvG~P~asp~d~~~~~~i~~ 98 (423)
T 3ivs_A 64 IQIAKALDNFGVDYIELTSPVASEQSRQDCEAICK 98 (423)
T ss_dssp HHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEEeecccCHHHHHHHHHHHh
Confidence 45677888889999999888888777766666554
No 232
>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3
Probab=22.49 E-value=1.1e+02 Score=28.37 Aligned_cols=48 Identities=19% Similarity=0.263 Sum_probs=40.2
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCEEEEEEEEe
Q 019951 85 DGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEIS 137 (333)
Q Consensus 85 DG~~sp~eli~~A~~~Gl~~laITDHdt~~g~~~~~~~a~~~gi~~i~GiEis 137 (333)
|-.-+|+++++..+.+|++.+=|=|-| ..+.++++..||+++.|+-.+
T Consensus 10 ~nlps~~~vv~llk~~~i~~vRlY~~d-----~~vL~A~~~tgi~v~lgv~n~ 57 (306)
T 1ghs_A 10 NNLPSRSDVVQLYRSKGINGMRIYFAD-----GQALSALRNSGIGLILDIGND 57 (306)
T ss_dssp SSCCCHHHHHHHHHHHTCCEEEESSCC-----HHHHHHTTTSCCEEEEECCGG
T ss_pred CCCcCHHHHHHHHHhcCCCEEEEcCCC-----HHHHHHHHhcCCEEEEecccc
Confidence 445789999999999999999998765 566777778999999998765
No 233
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=22.45 E-value=1.9e+02 Score=25.69 Aligned_cols=35 Identities=14% Similarity=0.144 Sum_probs=18.8
Q ss_pred HHHHHHHHHHhCCEE-EEeCCCCCCCcHHHHHHHHHcCC
Q 019951 253 AEVAVQLIHRTGGLA-VLAHPWALKNPAAIIRKLKDVGL 290 (333)
Q Consensus 253 ~eevI~~I~~aGGva-VLAHP~~~~~~~~li~~l~~~Gl 290 (333)
.++.++.+++.|--. ++.-|. .+.+.++.+.+.+-
T Consensus 136 ~~~~~~~~~~~g~~~i~l~~p~---t~~~~i~~i~~~~~ 171 (268)
T 1qop_A 136 SAPFRQAALRHNIAPIFICPPN---ADDDLLRQVASYGR 171 (268)
T ss_dssp CHHHHHHHHHTTCEEECEECTT---CCHHHHHHHHHHCC
T ss_pred HHHHHHHHHHcCCcEEEEECCC---CCHHHHHHHHhhCC
Confidence 567788888877432 223343 23445555555543
No 234
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=22.35 E-value=75 Score=28.79 Aligned_cols=66 Identities=12% Similarity=0.130 Sum_probs=50.2
Q ss_pred HHHHHHHHHHhCCEEEEeCCCCCCCcHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHhhcCCC
Q 019951 253 AEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVGVIFTLQDGSLFSLL 318 (333)
Q Consensus 253 ~eevI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~~~a~~~~l~ 318 (333)
.+..++...++|.--++.|..-+....++++.+.+.|++-|=+..|..+.+....+.+.+.-|=+.
T Consensus 112 ~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~~~~gfvY~ 177 (267)
T 3vnd_A 112 IDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMVSEQGEGYTYL 177 (267)
T ss_dssp HHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCSCEEE
T ss_pred HHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCCCcEEE
Confidence 578899999998777777644444557788888999999888888888887777777777655333
No 235
>2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A*
Probab=22.08 E-value=1.8e+02 Score=28.39 Aligned_cols=52 Identities=19% Similarity=0.298 Sum_probs=39.7
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEec-CC--------------CCC------CHHHHHHHHHhCCCEEEEEEEEe
Q 019951 84 SDGYLSPSKLVERAHCNGVKVLALTD-HD--------------TMS------GIPEAIETARRFGMKIIPGVEIS 137 (333)
Q Consensus 84 SDG~~sp~eli~~A~~~Gl~~laITD-Hd--------------t~~------g~~~~~~~a~~~gi~~i~GiEis 137 (333)
.-..+.|++.++.|++.|++.+.+|= |+ ++. =+.++.++|++.||++ |+=+|
T Consensus 101 ~p~~fDp~~Wa~~~k~AGakyvvlTaKHHDGF~lwpSk~t~~ns~~~~pkrDlv~El~~A~rk~Glk~--GlY~S 173 (455)
T 2zxd_A 101 TAEKWDPQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYTDFNSVKRGPKRDLVGDLAKAVREAGLRF--GVYYS 173 (455)
T ss_dssp CCTTCCHHHHHHHHHHTTCSEEEEEEECTTCCBSSCCSSCSCBTTTSTTCSCHHHHHHHHHHHTTCEE--EEEEE
T ss_pred CcccCCHHHHHHHHHHhCCCEEEEEeeccCCccccCCCCCCCcccccCCCCChHHHHHHHHHHcCCeE--EEEec
Confidence 34679999999999999999999873 32 221 1457888999999876 66666
No 236
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=22.02 E-value=1.6e+02 Score=26.10 Aligned_cols=22 Identities=32% Similarity=0.288 Sum_probs=17.8
Q ss_pred HHHHHHHHHcCCCEEEEeCCCC
Q 019951 279 AAIIRKLKDVGLHGLEVYRSDG 300 (333)
Q Consensus 279 ~~li~~l~~~GlDGIEv~~~~~ 300 (333)
.++++.+.+.|+|.||+-.|..
T Consensus 34 ~~~~~~l~~~GaD~ieig~P~s 55 (268)
T 1qop_A 34 LKIIDTLIDAGADALELGVPFS 55 (268)
T ss_dssp HHHHHHHHHTTCSSEEEECCCS
T ss_pred HHHHHHHHHCCCCEEEECCCCC
Confidence 4567788889999999987764
No 237
>2c4w_A 3-dehydroquinate dehydratase; 3-dehydroquinase, shikimate pathway, aromatic amino acid biosynthesis, lyase, sulphonamide; HET: GAJ; 1.55A {Helicobacter pylori} PDB: 2c57_A* 2xda_A* 1j2y_A* 2wks_A* 2xb9_A* 2c4v_A* 2xd9_A*
Probab=21.96 E-value=85 Score=26.95 Aligned_cols=47 Identities=19% Similarity=0.238 Sum_probs=37.6
Q ss_pred HHHHHHHHHHhCCE---EEEeCCCCCC-CcHHHHHHHHHcCCCEEEEeCCC
Q 019951 253 AEVAVQLIHRTGGL---AVLAHPWALK-NPAAIIRKLKDVGLHGLEVYRSD 299 (333)
Q Consensus 253 ~eevI~~I~~aGGv---aVLAHP~~~~-~~~~li~~l~~~GlDGIEv~~~~ 299 (333)
-.+.|+.||++.+- .|+=-|+.|. .+..+.+.+...++--|||.=|.
T Consensus 64 EGeLId~Ih~a~~~~~dgIIINpgAyTHtSvAlrDAl~~v~~P~VEVHiSN 114 (176)
T 2c4w_A 64 EGEIIDKIQESVGSEYEGIIINPGAFSHTSIAIADAIMLAGKPVIEVHLTN 114 (176)
T ss_dssp HHHHHHHHHHHHSSSCCEEEEECGGGGGTCHHHHHHHHTSSSCEEEEESSC
T ss_pred HHHHHHHHHHhccCCeeEEEECcchhccchHHHHHHHHhCCCCEEEEEecC
Confidence 35899999999543 6666799886 56788899999999999999653
No 238
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=21.94 E-value=1e+02 Score=27.95 Aligned_cols=41 Identities=27% Similarity=0.468 Sum_probs=30.3
Q ss_pred HHHHHHHHHhCCEEEEeCCCCCCCcHHHHHHHHHcCCCEEEEeCC
Q 019951 254 EVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRS 298 (333)
Q Consensus 254 eevI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~ 298 (333)
.+.|+.+|++ |+.|.+ |..+ ..+.+..+.++|+|||-.-+|
T Consensus 258 ~~~v~~~~~~-Gl~V~~--WTVn-~~~~~~~l~~~GVDgIiTD~P 298 (313)
T 3l12_A 258 PELVAEAHDL-GLIVLT--WTVN-EPEDIRRMATTGVDGIVTDYP 298 (313)
T ss_dssp HHHHHHHHHT-TCEEEE--BCCC-SHHHHHHHHHHTCSEEEESCH
T ss_pred HHHHHHHHHC-CCEEEE--EcCC-CHHHHHHHHHcCCCEEEeCCH
Confidence 5789999988 477765 3433 457788999999999976443
No 239
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=21.75 E-value=1.5e+02 Score=26.92 Aligned_cols=47 Identities=17% Similarity=0.228 Sum_probs=32.9
Q ss_pred CCCHHHHHHHHHHcCCcEEEEecCCCC-----CCHHHHHHHHHhCC----CEEEEE
Q 019951 87 YLSPSKLVERAHCNGVKVLALTDHDTM-----SGIPEAIETARRFG----MKIIPG 133 (333)
Q Consensus 87 ~~sp~eli~~A~~~Gl~~laITDHdt~-----~g~~~~~~~a~~~g----i~~i~G 133 (333)
..+++++++.|.+.+.++|+++=-.+. ....++.+.+++.+ +.++.|
T Consensus 166 ~vp~e~iv~aa~e~~~d~VglS~l~t~~~~~~~~~~~~i~~L~~~g~~~~i~vivG 221 (262)
T 1xrs_B 166 QVANEDFIKKAVELEADVLLVSQTVTQKNVHIQNMTHLIELLEAEGLRDRFVLLCG 221 (262)
T ss_dssp SBCHHHHHHHHHHTTCSEEEEECCCCTTSHHHHHHHHHHHHHHHTTCGGGSEEEEE
T ss_pred CCCHHHHHHHHHHcCCCEEEEEeecCCccchHHHHHHHHHHHHhcCCCCCCEEEEE
Confidence 489999999999999999999875554 12334455555544 555543
No 240
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=21.54 E-value=3.1e+02 Score=24.55 Aligned_cols=61 Identities=10% Similarity=0.008 Sum_probs=40.4
Q ss_pred HHHHHHH-HhCCEEEEeCCCCCCC--cHHHHHHHHHcCCCEEEEeCCCC----CHHHH-HHHHHHHhhcCC
Q 019951 255 VAVQLIH-RTGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG----KLVGV-IFTLQDGSLFSL 317 (333)
Q Consensus 255 evI~~I~-~aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~----~~~~~-~~~~~~a~~~~l 317 (333)
++++.+. .++| |+|+-+.... ..++.+.+.+.|.||+=+..|+. +.+.. .++.+.|..-++
T Consensus 55 ~v~~~~~~~~~g--vi~Gvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~l 123 (286)
T 2r91_A 55 ELTDAATSAARR--VIVQVASLNADEAIALAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSAVSI 123 (286)
T ss_dssp HHHHHHHHHCSS--EEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHhCC--EEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCC
Confidence 3455444 4467 8888776432 24566788899999999987753 33443 666778877664
No 241
>1luc_B Bacterial luciferase; monooxygenase, flavoprotein; 1.50A {Vibrio harveyi} SCOP: c.1.16.1 PDB: 1brl_B 1bsl_A 1xkj_A 3fgc_B*
Probab=21.40 E-value=1.4e+02 Score=27.18 Aligned_cols=47 Identities=9% Similarity=-0.106 Sum_probs=31.5
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCC------CHHHHHHHH-HhCCCEEEEEEEEe
Q 019951 91 SKLVERAHCNGVKVLALTDHDTMS------GIPEAIETA-RRFGMKIIPGVEIS 137 (333)
Q Consensus 91 ~eli~~A~~~Gl~~laITDHdt~~------g~~~~~~~a-~~~gi~~i~GiEis 137 (333)
-++++.|.+.|++.+.+.||+... .+.-+...+ .-..|++-+|+=+-
T Consensus 25 ~~~a~~AE~~Gfd~~w~~eh~~~~~~~~~~p~~~la~~A~~T~ri~lgt~v~~~ 78 (324)
T 1luc_B 25 LDTAHYVDQLKFDTLAVYENHFSNNGVVGAPLTVAGFLLGMTKNAKVASLNHVI 78 (324)
T ss_dssp HHHHHHHHTSSCCEEEECCCCSSSSCSCSCHHHHHHHHHHHCSSSEEEEEEEEC
T ss_pred HHHHHHHHHCCCCEEEeccCCCCCCCCCCCHHHHHHHHHHhcCceEEEEeeeeC
Confidence 457778889999999999997542 122222222 33679988887664
No 242
>1fvp_A Flavoprotein 390, FP390; flavin-binding protein; HET: FMA; 2.70A {Photobacterium phosphoreum} SCOP: c.1.16.2
Probab=21.40 E-value=52 Score=28.12 Aligned_cols=40 Identities=10% Similarity=0.088 Sum_probs=29.3
Q ss_pred CHHHHHHHHHH--cCCcEEEEecCCCCCCHHHHHHHHHhCCCEEEEEEEE
Q 019951 89 SPSKLVERAHC--NGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEI 136 (333)
Q Consensus 89 sp~eli~~A~~--~Gl~~laITDHdt~~g~~~~~~~a~~~gi~~i~GiEi 136 (333)
..-++++.|.+ .|++.+.+++|+.+.+. |+..+ ++|++.+
T Consensus 27 ~~~~la~~Ae~~~lGf~~~w~~EHH~~~~~------AE~~~--~~~~~~~ 68 (231)
T 1fvp_A 27 NALETLRIIDEDTSIYDVINIDDHYLVKKD------SEDKK--LAPFITL 68 (231)
T ss_dssp HHHHHHHHHHHHCSSEEEEEEECTTSCCBC------TTSCB--CCCEEEE
T ss_pred HHHHHHHHHhhhcCCCCeEeecccCCCCCc------cccee--ecCcCCC
Confidence 34457788889 99999999999998865 33333 3666654
No 243
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=21.39 E-value=1.5e+02 Score=26.78 Aligned_cols=60 Identities=7% Similarity=-0.095 Sum_probs=34.1
Q ss_pred HHHHHHHh--CCEEEEeCCCCCCC--cHHHHHHHHHcCCCEEEEeCCCC----CHHHH-HHHHHHHhhc
Q 019951 256 AVQLIHRT--GGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG----KLVGV-IFTLQDGSLF 315 (333)
Q Consensus 256 vI~~I~~a--GGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~----~~~~~-~~~~~~a~~~ 315 (333)
+++.+.++ |.++|+|+-+.... ..++.+.+.+.|.||+=+..|+. +.++. .++.+.|..-
T Consensus 61 v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~ 129 (294)
T 3b4u_A 61 ILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKI 129 (294)
T ss_dssp HHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhc
Confidence 44444332 34677777665332 13455666777888887776643 23333 5556666655
No 244
>1ryp_F 20S proteasome; multicatalytic proteinase, protein degradation, antigen processing, hydrolase, protease; 1.90A {Saccharomyces cerevisiae} SCOP: d.153.1.4 PDB: 1jd2_E* 1g65_E 2f16_E* 2fak_E* 2fny_E* 2gpl_E* 3d29_E* 3dy3_E* 3dy4_E* 3e47_E* 3gpj_E* 3gpt_E* 3gpw_E* 3hye_E* 3mg0_E* 3mg4_E* 3oeu_E* 3oev_E* 3okj_E* 3shj_E* ...
Probab=21.31 E-value=69 Score=27.89 Aligned_cols=29 Identities=24% Similarity=0.243 Sum_probs=26.2
Q ss_pred CcCC-CCCCCHHHHHHHHHHcCCcEEEEec
Q 019951 81 SNFS-DGYLSPSKLVERAHCNGVKVLALTD 109 (333)
Q Consensus 81 T~~S-DG~~sp~eli~~A~~~Gl~~laITD 109 (333)
|+|| ||.+---|+...|.++|-..|||.=
T Consensus 10 t~fsp~Grl~QvEyA~~av~~Gtt~vgi~~ 39 (233)
T 1ryp_F 10 VTFSPTGRLFQVEYALEAIKQGSVTVGLRS 39 (233)
T ss_dssp TCCCTTSCCHHHHHHHHHHHTSCCEEEEEC
T ss_pred ccCCCCCeehHHHHHHHHHHcCCCEEEEEc
Confidence 5678 9999999999999999999999964
No 245
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=21.29 E-value=81 Score=28.18 Aligned_cols=61 Identities=8% Similarity=0.009 Sum_probs=36.4
Q ss_pred HHHHHHHhCCEEEEeCCCCCCCcHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHhhcCCCc
Q 019951 256 AVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVGVIFTLQDGSLFSLLP 319 (333)
Q Consensus 256 vI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~~~a~~~~l~~ 319 (333)
-+..|+++=+++|+.- +...+ ...+.++.+.|.|+|=+....-+ +++..+.+.|+++|+++
T Consensus 97 ~l~~i~~~v~lPvl~k-dfI~d-~~qi~~a~~~GAD~VlL~~~~l~-~~l~~l~~~a~~lGl~~ 157 (254)
T 1vc4_A 97 DLKRVREAVDLPLLRK-DFVVD-PFMLEEARAFGASAALLIVALLG-ELTGAYLEEARRLGLEA 157 (254)
T ss_dssp HHHHHHHHCCSCEEEE-SCCCS-HHHHHHHHHTTCSEEEEEHHHHG-GGHHHHHHHHHHHTCEE
T ss_pred HHHHHHHhcCCCEEEC-CcCCC-HHHHHHHHHcCCCEEEECccchH-HHHHHHHHHHHHCCCeE
Confidence 4556666666666642 11112 23456677777777777665444 56666777777777654
No 246
>1nfp_A LUXF gene product; flavin mononucleotide, myristate, flavoprotein; HET: FMN MYR; 1.60A {Photobacterium leiognathi} SCOP: c.1.16.2
Probab=21.23 E-value=54 Score=28.13 Aligned_cols=38 Identities=13% Similarity=0.122 Sum_probs=28.3
Q ss_pred HHHHHHHHH--cCCcEEEEecCCCCCCHHHHHHHHHhCCCEEEEEEEE
Q 019951 91 SKLVERAHC--NGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEI 136 (333)
Q Consensus 91 ~eli~~A~~--~Gl~~laITDHdt~~g~~~~~~~a~~~gi~~i~GiEi 136 (333)
-++++.|.+ .|++.+.+++|+.+.+. |+..++ +|++.+
T Consensus 29 ~~la~~Ae~~~lGf~~~w~~EHH~~~~~------AE~~~~--~~~~~~ 68 (228)
T 1nfp_A 29 LETLRIIDEDTSIYDVVAFSEHHIDKSY------NDETKL--APFVSL 68 (228)
T ss_dssp HHHHHHHHHTCSCEEEEEEECTTSCCBC------TTSCBC--CCEEEE
T ss_pred HHHHHHhccccCCCCEEeccccCCCCCC------ccceee--cCCCCC
Confidence 347788889 99999999999998865 343333 666654
No 247
>2e1o_A Homeobox protein PRH; DNA binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=21.03 E-value=1.8e+02 Score=20.08 Aligned_cols=21 Identities=19% Similarity=0.458 Sum_probs=16.4
Q ss_pred cCCCCCCCCHHHHHHHHHHHH
Q 019951 22 RGGGKKKMTAEQSLAFNSVTE 42 (333)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~ 42 (333)
+++++...|.+|...|...++
T Consensus 7 ~~r~R~~ft~~q~~~Le~~F~ 27 (70)
T 2e1o_A 7 GKGGQVRFSNDQTIELEKKFE 27 (70)
T ss_dssp CCCCCCCCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHH
Confidence 344566799999999998884
No 248
>3mdu_A N-formimino-L-glutamate iminohydrolase; amonohydralase family, N-formimino-L-glutamate iminohydrolas guanidino-L-glutamate; HET: NGQ; 1.40A {Pseudomonas aeruginosa} PDB: 3mdw_A*
Probab=21.03 E-value=1.9e+02 Score=27.26 Aligned_cols=62 Identities=23% Similarity=0.185 Sum_probs=37.8
Q ss_pred eEEceeeeCcCC--CC------------------------CCCHHHHHHH-------HHHcCCcEEEE--ecCCCCCC--
Q 019951 73 VVFELHSHSNFS--DG------------------------YLSPSKLVER-------AHCNGVKVLAL--TDHDTMSG-- 115 (333)
Q Consensus 73 ~~~DLH~HT~~S--DG------------------------~~sp~eli~~-------A~~~Gl~~laI--TDHdt~~g-- 115 (333)
-.||.|+|...+ -| .++|+++... +.+.|+..+.- +-|....|
T Consensus 51 GfId~H~H~~~~~~rg~~~~~~~~~~~l~~wl~~~~~~~~~~~~e~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~g~~ 130 (453)
T 3mdu_A 51 GMPNLHSHAFQRAMAGLAEVAGNPNDSFWTWRELMYRMVARLSPEQIEVIACQLYIEMLKAGYTAVAEFHYVHHDLDGRS 130 (453)
T ss_dssp CEEEEEECGGGGGGTTTTCCCSSTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTEEEEEEEECCCSCTTSCC
T ss_pred cceecccchHHHhhccccccccCCCCcHHHHHHHHhhhhhhCCHHHHHHHHHHHHHHHHHcCCcEEEEeeEecccccccc
Confidence 488999998543 11 2466665333 66789887663 23433222
Q ss_pred -------HHHHHHHHHhCCCEEEEEE
Q 019951 116 -------IPEAIETARRFGMKIIPGV 134 (333)
Q Consensus 116 -------~~~~~~~a~~~gi~~i~Gi 134 (333)
...+.+++++.|++.+.+.
T Consensus 131 ~~~~~~~~~~~~~a~~~~Gir~~~~~ 156 (453)
T 3mdu_A 131 YADPAELSLRISRAASAAGIGLTLLP 156 (453)
T ss_dssp CSSTTHHHHHHHHHHHHHTCEEEEEE
T ss_pred ccchhhHHHHHHHHHHHhCCeEEEec
Confidence 2455666778899877653
No 249
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=20.80 E-value=1.4e+02 Score=31.35 Aligned_cols=47 Identities=17% Similarity=0.362 Sum_probs=35.4
Q ss_pred CCCHHHHHHHHHHcCCcEEEEecCCCCC--CHHHHHHHHHhCC---CEEEEE
Q 019951 87 YLSPSKLVERAHCNGVKVLALTDHDTMS--GIPEAIETARRFG---MKIIPG 133 (333)
Q Consensus 87 ~~sp~eli~~A~~~Gl~~laITDHdt~~--g~~~~~~~a~~~g---i~~i~G 133 (333)
..+|+++++.|++.+.+.|+|+=.++.. ...++.+..++.| +.++.|
T Consensus 641 ~v~~eeiv~aA~e~~adiVglSsl~~~~~~~~~~vi~~Lr~~G~~dv~VivG 692 (762)
T 2xij_A 641 FQTPREVAQQAVDADVHAVGVSTLAAGHKTLVPELIKELNSLGRPDILVMCG 692 (762)
T ss_dssp TCCHHHHHHHHHHTTCSEEEEEECSSCHHHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred CCCHHHHHHHHHHcCCCEEEEeeecHHHHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 4799999999999999999999766543 2345555666555 477777
No 250
>1ryp_D 20S proteasome; multicatalytic proteinase, protein degradation, antigen processing, hydrolase, protease; 1.90A {Saccharomyces cerevisiae} SCOP: d.153.1.4 PDB: 1jd2_C* 1g65_C 2f16_C* 2fak_C* 2fny_C* 2gpl_C* 3d29_C* 3dy3_C* 3dy4_C* 3e47_C* 3gpj_C* 3gpt_C* 3gpw_C* 3hye_C* 3mg0_C* 3mg4_C* 3oeu_C* 3oev_C* 3okj_C* 3shj_C* ...
Probab=20.78 E-value=62 Score=28.33 Aligned_cols=30 Identities=23% Similarity=0.247 Sum_probs=26.9
Q ss_pred CcCC-CCCCCHHHHHHHHHHcCCcEEEEecC
Q 019951 81 SNFS-DGYLSPSKLVERAHCNGVKVLALTDH 110 (333)
Q Consensus 81 T~~S-DG~~sp~eli~~A~~~Gl~~laITDH 110 (333)
|+|| ||.+---|+..+|..+|-..|||.=-
T Consensus 7 t~fsp~Grl~QvEya~~av~~Gtt~vgi~~~ 37 (241)
T 1ryp_D 7 SIFSPDGHIFQVEYALEAVKRGTCAVGVKGK 37 (241)
T ss_dssp SCCBTTTBCHHHHHHHHHHTTSCCEEEEECS
T ss_pred eeECCCCcchHHHHHHHHHHcCCCEEEEEeC
Confidence 5688 99999999999999999999999753
No 251
>1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3
Probab=20.75 E-value=87 Score=27.26 Aligned_cols=34 Identities=24% Similarity=0.250 Sum_probs=25.3
Q ss_pred hCCEEEEeCCCCC----CCcHHHHHHHHHcCCCEEEEe
Q 019951 263 TGGLAVLAHPWAL----KNPAAIIRKLKDVGLHGLEVY 296 (333)
Q Consensus 263 aGGvaVLAHP~~~----~~~~~li~~l~~~GlDGIEv~ 296 (333)
..-+.|+||=|.. -|..+-++.+.+.|.|+||+-
T Consensus 10 ~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~D 47 (234)
T 1o1z_A 10 HHHVIVLGHRGYSAKYLENTLEAFMKAIEAGANGVELD 47 (234)
T ss_dssp CCCCEEEEETTTTTTSCTTSHHHHHHHHHTTCSEEEEE
T ss_pred cceEEEEEcCCCCCCCCCchHHHHHHHHHcCCCEEEEE
Confidence 3557899997643 244556778899999999985
No 252
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=20.73 E-value=1.1e+02 Score=27.78 Aligned_cols=45 Identities=16% Similarity=0.226 Sum_probs=30.3
Q ss_pred HHHHHHHHHHhCCEEEEeC-CCCCCC------cHHHHHHHHHcCCCEEEEeCC
Q 019951 253 AEVAVQLIHRTGGLAVLAH-PWALKN------PAAIIRKLKDVGLHGLEVYRS 298 (333)
Q Consensus 253 ~eevI~~I~~aGGvaVLAH-P~~~~~------~~~li~~l~~~GlDGIEv~~~ 298 (333)
..+.|+.+|+.|=. |.+. ++..+. ..+.+..+.++|+|||-.-+|
T Consensus 217 ~~~~V~~ah~~G~~-V~vWTv~t~d~~~~~~~~~~~~~~L~~~GVDgIiTD~P 268 (292)
T 3mz2_A 217 VREVIDMLHERGVM-CMISTAPSDDKLSTPESRAEAYRMIIRQGVDIIESDRP 268 (292)
T ss_dssp HHHHHHHHHHTTBC-EEEECTTTGGGSSSHHHHHHHHHHHHHTTCCEEEESCH
T ss_pred CHHHHHHHHHCCCE-EEEEeCCCcchhhhccccHHHHHHHHHcCCCEEEeCCH
Confidence 45789999998744 4332 222111 135788999999999987664
No 253
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=20.71 E-value=2.6e+02 Score=25.50 Aligned_cols=62 Identities=8% Similarity=0.024 Sum_probs=36.6
Q ss_pred HHHHHHHh--CCEEEEeCCCCCCC--cHHHHHHHHHcCC-CEEEEeCCCC---CHHHH-HHHHHHHhhcCC
Q 019951 256 AVQLIHRT--GGLAVLAHPWALKN--PAAIIRKLKDVGL-HGLEVYRSDG---KLVGV-IFTLQDGSLFSL 317 (333)
Q Consensus 256 vI~~I~~a--GGvaVLAHP~~~~~--~~~li~~l~~~Gl-DGIEv~~~~~---~~~~~-~~~~~~a~~~~l 317 (333)
+++.+.++ |.++|+|+-+.... ..++.+.+.++|. ||+=+..|+. +.++. .++.+.|..-++
T Consensus 65 v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a~~l 135 (311)
T 3h5d_A 65 LFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADASDL 135 (311)
T ss_dssp HHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEECCCSSCCCHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 44444443 55788888765332 1345566777775 8888877653 33333 566667776554
No 254
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=20.68 E-value=56 Score=26.69 Aligned_cols=25 Identities=12% Similarity=0.040 Sum_probs=20.7
Q ss_pred CCHHHHHHHHHHcCCcEEEEecCCC
Q 019951 88 LSPSKLVERAHCNGVKVLALTDHDT 112 (333)
Q Consensus 88 ~sp~eli~~A~~~Gl~~laITDHdt 112 (333)
-..-++++.|+++|.+.++||+...
T Consensus 96 ~~~~~~~~~ak~~g~~vi~IT~~~~ 120 (180)
T 1jeo_A 96 ESVLTVAKKAKNINNNIIAIVCECG 120 (180)
T ss_dssp HHHHHHHHHHHTTCSCEEEEESSCC
T ss_pred HHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 4456788999999999999999643
No 255
>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis}
Probab=20.64 E-value=1e+02 Score=28.80 Aligned_cols=38 Identities=11% Similarity=0.043 Sum_probs=29.4
Q ss_pred eEEceeeeCcCC--CCCCCHHHHHHHHHHcCCcEEEEecC
Q 019951 73 VVFELHSHSNFS--DGYLSPSKLVERAHCNGVKVLALTDH 110 (333)
Q Consensus 73 ~~~DLH~HT~~S--DG~~sp~eli~~A~~~Gl~~laITDH 110 (333)
-.+|.|+|...+ ....+.......|.+.|+..+..+=+
T Consensus 54 G~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~ 93 (428)
T 3mpg_A 54 GLVDVHVHLREPGGEHKETIETGTLAAAKGGFTTICAMPN 93 (428)
T ss_dssp CEEEEEECCCTTTCTTTCCHHHHHHHHHHHTEEEEEECSC
T ss_pred CEEEEeeccCCCCCCchhHHHHHHHHHHhCCeEEEEeCCC
Confidence 478999998654 23456778899999999998887643
No 256
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=20.56 E-value=1.2e+02 Score=26.60 Aligned_cols=41 Identities=20% Similarity=0.225 Sum_probs=30.8
Q ss_pred HHHHHHHHHhCCEEEEeCCCCCCCcHHHHHHHHHcCCCEEEEeCC
Q 019951 254 EVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRS 298 (333)
Q Consensus 254 eevI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~ 298 (333)
.+.|+.+|++| +.|.++ .. +..+.+..+.++|+|||-.-+|
T Consensus 194 ~~~v~~~~~~G-~~V~~W--Tv-n~~~~~~~l~~~GVDgIiTD~P 234 (250)
T 3ks6_A 194 AGLMAQVQAAG-LDFGCW--AA-HTPSQITKALDLGVKVFTTDRP 234 (250)
T ss_dssp HHHHHHHHHTT-CEEEEE--CC-CSHHHHHHHHHHTCSEEEESCH
T ss_pred HHHHHHHHHCC-CEEEEE--eC-CCHHHHHHHHHcCCCEEEcCCH
Confidence 57899999885 666554 33 3357788999999999976654
No 257
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=20.53 E-value=4.3e+02 Score=23.04 Aligned_cols=83 Identities=10% Similarity=-0.005 Sum_probs=50.3
Q ss_pred HHHHHhhcCCCCcccCCCCCC------HHHHHHHHHHhCCEEEEe-CCCCCCC-c---HHHHHHHHHcCCCEEEEeCCCC
Q 019951 232 QAFARYLYDGGPAYSTGSEPL------AEVAVQLIHRTGGLAVLA-HPWALKN-P---AAIIRKLKDVGLHGLEVYRSDG 300 (333)
Q Consensus 232 ~~f~~yl~~~~~~yv~~~~~~------~eevI~~I~~aGGvaVLA-HP~~~~~-~---~~li~~l~~~GlDGIEv~~~~~ 300 (333)
+.+...+..+++.|+.-+.-. ..++++.+|+.|...|+. |-+...- . ..++.++.+.|-|-+=+....+
T Consensus 87 ~ll~~~~~~~~~d~iDvEl~~~~~~~~~~~l~~~~~~~~~kvI~S~Hdf~~tp~~~el~~~~~~~~~~gaDivKia~~a~ 166 (238)
T 1sfl_A 87 NLISDLANINGIDMIDIEWQADIDIEKHQRIITHLQQYNKEVIISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPH 166 (238)
T ss_dssp HHHHHGGGCTTCCEEEEECCTTSCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHTTCCSEEEEEECCS
T ss_pred HHHHHHHHhCCCCEEEEEccCCCChHHHHHHHHHHHhcCCEEEEEecCCCCCcCHHHHHHHHHHHHHcCCCEEEEEecCC
Confidence 445555555567787544322 345666666666544444 4322111 1 3345677788999999888888
Q ss_pred CHHHHHHHHHHHhh
Q 019951 301 KLVGVIFTLQDGSL 314 (333)
Q Consensus 301 ~~~~~~~~~~~a~~ 314 (333)
+.++...+.++..+
T Consensus 167 ~~~D~l~ll~~~~~ 180 (238)
T 1sfl_A 167 NKNDVLNLLQAMST 180 (238)
T ss_dssp SHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 88888666665444
No 258
>2djn_A Homeobox protein DLX-5; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.50 E-value=2.2e+02 Score=19.68 Aligned_cols=21 Identities=10% Similarity=-0.056 Sum_probs=15.7
Q ss_pred cCCCCCCCCHHHHHHHHHHHH
Q 019951 22 RGGGKKKMTAEQSLAFNSVTE 42 (333)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~ 42 (333)
.++++...|.+|...|...++
T Consensus 7 ~rr~Rt~ft~~Q~~~Le~~F~ 27 (70)
T 2djn_A 7 GRKPRTIYSSFQLAALQRRFQ 27 (70)
T ss_dssp CCCSSCSSCHHHHHHHHHHHT
T ss_pred CCCCCCCCCHHHHHHHHHHHc
Confidence 344556789999999988873
No 259
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=20.42 E-value=2.3e+02 Score=24.31 Aligned_cols=63 Identities=13% Similarity=0.094 Sum_probs=48.3
Q ss_pred HHHHHHHHHHhCCEEEEeCCCCCC---C----------cHHHHHHHHHcCCCEEEEeCCCCCH-----HHHHHHHHHHhh
Q 019951 253 AEVAVQLIHRTGGLAVLAHPWALK---N----------PAAIIRKLKDVGLHGLEVYRSDGKL-----VGVIFTLQDGSL 314 (333)
Q Consensus 253 ~eevI~~I~~aGGvaVLAHP~~~~---~----------~~~li~~l~~~GlDGIEv~~~~~~~-----~~~~~~~~~a~~ 314 (333)
.++++++|++ ||++|+|||.+++ . ...+++.+++.| .+||+.++.... .....++++|++
T Consensus 137 ~~~~~~~i~~-g~~~vlaHp~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g-~~iEvn~~~~~~~~~~~~~~~~~~~~~~~ 214 (267)
T 2yxo_A 137 FQEVEKAARS-GLFHAIGHLDLPKKFGHRLPEEALLELAEPALRAVAEAG-LFLDVNTAGLRRPAKEVYPAPALLRRARE 214 (267)
T ss_dssp HHHHHHHHTS-SCCSEESCTTGGGTTSCCCCHHHHHHHHHHHHHHHHHHT-CEEEEEGGGGGSTTCSCBSCHHHHHHHHH
T ss_pred HHHHHHHHhc-CCCCEEeCccHHHHhCCCCChHHHHHHHHHHHHHHHHcC-CEEEEEchHhcCCCCCCCCCHHHHHHHHH
Confidence 5788999986 9999999999742 1 135688888999 599998765321 234788899999
Q ss_pred cCC
Q 019951 315 FSL 317 (333)
Q Consensus 315 ~~l 317 (333)
+|+
T Consensus 215 ~g~ 217 (267)
T 2yxo_A 215 LGI 217 (267)
T ss_dssp HTC
T ss_pred cCC
Confidence 997
No 260
>1bw5_A ISL-1HD, insulin gene enhancer protein ISL-1; DNA-binding protein, homeodomain, LIM domain; NMR {Rattus norvegicus} SCOP: a.4.1.1
Probab=20.40 E-value=2.1e+02 Score=19.46 Aligned_cols=22 Identities=5% Similarity=-0.034 Sum_probs=17.1
Q ss_pred cCCCCCCCCHHHHHHHHHHHHH
Q 019951 22 RGGGKKKMTAEQSLAFNSVTEW 43 (333)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~ 43 (333)
+++++...|.+|...|...++-
T Consensus 3 ~rr~Rt~ft~~q~~~Le~~F~~ 24 (66)
T 1bw5_A 3 TTRVRTVLNEKQLHTLRTCYAA 24 (66)
T ss_dssp CSCCCCCCSHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHhc
Confidence 4456677899999999988854
No 261
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=20.36 E-value=51 Score=28.09 Aligned_cols=21 Identities=33% Similarity=0.431 Sum_probs=12.6
Q ss_pred HHHHHHHHHHcCCcEEEEecC
Q 019951 90 PSKLVERAHCNGVKVLALTDH 110 (333)
Q Consensus 90 p~eli~~A~~~Gl~~laITDH 110 (333)
+-++++.|+++|.+.++||+-
T Consensus 147 ~i~~~~~ak~~G~~vIaIT~~ 167 (212)
T 2i2w_A 147 VIKAIAAAREKGMKVITLTGK 167 (212)
T ss_dssp HHHHHHHHHHHTCEEEEEEET
T ss_pred HHHHHHHHHHCCCeEEEEECC
Confidence 445566666666666666663
No 262
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=20.35 E-value=1.3e+02 Score=25.81 Aligned_cols=41 Identities=37% Similarity=0.374 Sum_probs=0.0
Q ss_pred HHHHHHHHHhCCEEEEeCCCCCCCcHHHHHHHHHcCCCEEEEeCC
Q 019951 254 EVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRS 298 (333)
Q Consensus 254 eevI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~ 298 (333)
.+.|+.+|++| +.|.+.-- +..+.+..+.++|+|||-.-+|
T Consensus 176 ~~~v~~~~~~G-~~v~~wtv---n~~~~~~~l~~~GvdgI~TD~p 216 (224)
T 1vd6_A 176 EEAVAGWRKRG-LFVVAWTV---NEEGEARRLLALGLDGLIGDRP 216 (224)
T ss_dssp HHHHHHHHHTT-CEEEEECC---CCHHHHHHHHHTTCSEEEESCH
T ss_pred HHHHHHHHHCC-CEEEEEeC---CCHHHHHHHHhcCCCEEEcCCH
No 263
>1ezw_A Coenzyme F420-dependent N5,N10- methylenetetrahydromethanopterin reductase; (beta, alpha)8 barrel, TIM barrel, oxidoreductase; 1.65A {Methanopyrus kandleri} SCOP: c.1.16.3
Probab=20.22 E-value=1.4e+02 Score=27.31 Aligned_cols=49 Identities=20% Similarity=0.179 Sum_probs=31.9
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCC-HHHHHHHHH-hCCCEEEEEEEEee
Q 019951 90 PSKLVERAHCNGVKVLALTDHDTMSG-IPEAIETAR-RFGMKIIPGVEIST 138 (333)
Q Consensus 90 p~eli~~A~~~Gl~~laITDHdt~~g-~~~~~~~a~-~~gi~~i~GiEis~ 138 (333)
.-++++.|.+.|++.+.++||..... +.-+...+. -..|++.+|+=+..
T Consensus 19 ~~~~a~~AE~~Gfd~~w~~eh~~~~dp~~~la~lAa~T~rI~lgt~v~~~~ 69 (349)
T 1ezw_A 19 IAHLIKVAEDNGFEYAWICDHYNNYSYMGVLTLAAVITSKIKLGPGITNPY 69 (349)
T ss_dssp HHHHHHHHHHTTCCEEEECCCTTSCCHHHHHHHHHHTCSSSEEEESSBCSS
T ss_pred HHHHHHHHHHcCCCEEEeccccCCCCHHHHHHHHHHhCCcceEEeeeecCC
Confidence 44567778899999999999975432 222222233 35688877765443
No 264
>2dmq_A LIM/homeobox protein LHX9; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.21 E-value=1.9e+02 Score=20.53 Aligned_cols=21 Identities=10% Similarity=-0.031 Sum_probs=16.4
Q ss_pred cCCCCCCCCHHHHHHHHHHHH
Q 019951 22 RGGGKKKMTAEQSLAFNSVTE 42 (333)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~ 42 (333)
+++++...|.+|...|...++
T Consensus 7 ~rr~Rt~ft~~Q~~~Le~~F~ 27 (80)
T 2dmq_A 7 GKRMRTSFKHHQLRTMKSYFA 27 (80)
T ss_dssp CCCCCCCCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHH
Confidence 345566789999999988874
No 265
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=20.15 E-value=1.8e+02 Score=27.02 Aligned_cols=52 Identities=13% Similarity=0.219 Sum_probs=37.1
Q ss_pred CCCC-HHHHHHHHHHhCCEE-EEe----------CCCCCCCcHHHHHHHHHcCCCEEEEeCCCC
Q 019951 249 SEPL-AEVAVQLIHRTGGLA-VLA----------HPWALKNPAAIIRKLKDVGLHGLEVYRSDG 300 (333)
Q Consensus 249 ~~~~-~eevI~~I~~aGGva-VLA----------HP~~~~~~~~li~~l~~~GlDGIEv~~~~~ 300 (333)
.+|+ ++.+++.||+.|=.. +.. ||+.+...+...+.+.+.|+|+|-+-....
T Consensus 71 ~FP~Gl~~l~~~ih~~Glk~Giw~~~~~~~~~~~~pg~~~~~~~~~~~~~~wGvdyvK~D~~~~ 134 (362)
T 1uas_A 71 TFPSGIKALADYVHAKGLKLGIYSDAGSQTCSNKMPGSLDHEEQDVKTFASWGVDYLKYDNCND 134 (362)
T ss_dssp TCTTCHHHHHHHHHHTTCEEEEEEESSSBCTTSSSBCCTTCHHHHHHHHHHHTCCEEEEECCCC
T ss_pred ccCccHHHHHHHHHHCCCEeEEEeeCCCccccCCCCCchhHHHHHHHHHHHcCCCEEEECccCC
Confidence 3676 999999999987553 333 343333346678889999999999876543
No 266
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=20.15 E-value=1.9e+02 Score=21.38 Aligned_cols=44 Identities=11% Similarity=0.133 Sum_probs=33.0
Q ss_pred CCCCCCCHHHHHHHHHHHHHhccCCCCCCCCCCCccccccccccccCCceEEceeeeCcCCCCCCCHHHHHHHHHHcCCc
Q 019951 24 GGKKKMTAEQSLAFNSVTEWVYLDQSHSSSSSEDDFGVHQILNRAVDNNVVFELHSHSNFSDGYLSPSKLVERAHCNGVK 103 (333)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DLH~HT~~SDG~~sp~eli~~A~~~Gl~ 103 (333)
.+....|.++...|+.+++-++.+ .+|.++.+|+.......|..
T Consensus 25 ~~~~~l~~~~~~el~~~F~~~D~d------------------------------------~~G~I~~~El~~~l~~lg~~ 68 (100)
T 2lv7_A 25 QRPVDIPEDELEEIREAFKVFDRD------------------------------------GNGFISKQELGTAMRSLGYM 68 (100)
T ss_dssp CSCCCCCGGGHHHHHHHHHHTCSS------------------------------------CSSCBCHHHHHHHHHHHTCC
T ss_pred cccccCCHHHHHHHHHHHHHHcCC------------------------------------CCCcCCHHHHHHHHHHhCCC
Confidence 334567778888888888766544 47889999999988888865
No 267
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=20.02 E-value=1.7e+02 Score=23.33 Aligned_cols=39 Identities=28% Similarity=0.261 Sum_probs=29.1
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCEEE
Q 019951 90 PSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKII 131 (333)
Q Consensus 90 p~eli~~A~~~Gl~~laITDHdt~~g~~~~~~~a~~~gi~~i 131 (333)
..++++.+.+.|++.+.++.. . .-.++.+.+++.|++++
T Consensus 90 ~~~vv~~~~~~gi~~i~~~~g--~-~~~~l~~~a~~~Gi~vv 128 (144)
T 2d59_A 90 TMEYVEQAIKKGAKVVWFQYN--T-YNREASKKADEAGLIIV 128 (144)
T ss_dssp HHHHHHHHHHHTCSEEEECTT--C-CCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHcCCCEEEECCC--c-hHHHHHHHHHHcCCEEE
Confidence 355678888999998877642 2 25778888899999866
Done!