Query 019956
Match_columns 333
No_of_seqs 207 out of 1079
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 05:52:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019956.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019956hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2234 Predicted UDP-galactos 100.0 2.2E-56 4.8E-61 412.1 29.8 286 46-332 15-310 (345)
2 PF04142 Nuc_sug_transp: Nucle 100.0 1.6E-45 3.5E-50 334.6 24.1 219 114-333 12-242 (244)
3 TIGR00803 nst UDP-galactose tr 99.9 2.5E-25 5.4E-30 200.0 17.1 209 122-332 2-212 (222)
4 PLN00411 nodulin MtN21 family 99.9 2.3E-21 4.9E-26 185.7 28.3 272 47-332 14-316 (358)
5 PRK15430 putative chlorampheni 99.9 2.6E-20 5.7E-25 174.4 27.4 264 46-332 8-273 (296)
6 PF08449 UAA: UAA transporter 99.9 4.9E-20 1.1E-24 173.2 29.0 246 77-332 31-285 (303)
7 PRK11453 O-acetylserine/cystei 99.9 2.4E-19 5.3E-24 168.1 30.9 262 49-332 7-275 (299)
8 PRK11272 putative DMT superfam 99.9 1.5E-19 3.3E-24 168.9 28.7 256 49-332 11-273 (292)
9 PF06027 DUF914: Eukaryotic pr 99.9 2.6E-19 5.7E-24 168.8 28.3 264 54-332 21-293 (334)
10 PTZ00343 triose or hexose phos 99.9 1.5E-18 3.3E-23 166.2 33.3 247 75-332 74-336 (350)
11 TIGR00950 2A78 Carboxylate/Ami 99.9 2.4E-19 5.2E-24 164.1 26.7 249 58-332 1-252 (260)
12 PRK11689 aromatic amino acid e 99.9 6.1E-19 1.3E-23 165.2 27.0 257 47-332 5-275 (295)
13 TIGR00817 tpt Tpt phosphate/ph 99.8 3.4E-18 7.4E-23 160.5 26.8 261 56-332 12-281 (302)
14 KOG1581 UDP-galactose transpor 99.8 1E-17 2.2E-22 151.9 27.0 249 73-332 45-301 (327)
15 PRK10532 threonine and homoser 99.8 4.2E-17 9E-22 152.6 28.0 257 45-332 11-269 (293)
16 TIGR00688 rarD rarD protein. T 99.8 5.6E-17 1.2E-21 148.6 26.0 249 47-319 3-255 (256)
17 KOG3912 Predicted integral mem 99.8 3.8E-17 8.2E-22 146.4 19.4 278 49-331 6-321 (372)
18 TIGR03340 phn_DUF6 phosphonate 99.7 1.1E-15 2.5E-20 142.0 23.7 204 122-332 66-271 (281)
19 COG0697 RhaT Permeases of the 99.7 1.6E-14 3.5E-19 133.1 30.6 267 47-332 8-275 (292)
20 KOG1580 UDP-galactose transpor 99.7 5E-17 1.1E-21 142.4 11.1 212 119-332 85-301 (337)
21 TIGR00776 RhaT RhaT L-rhamnose 99.5 1.1E-10 2.5E-15 109.1 27.3 259 48-332 3-276 (290)
22 KOG4510 Permease of the drug/m 99.4 5.9E-13 1.3E-17 119.0 5.9 203 122-333 100-314 (346)
23 COG2962 RarD Predicted permeas 99.4 7.4E-10 1.6E-14 100.9 24.7 258 46-330 7-269 (293)
24 KOG1443 Predicted integral mem 99.3 9.3E-11 2E-15 106.9 15.6 275 49-332 15-303 (349)
25 KOG1444 Nucleotide-sugar trans 99.1 3.4E-08 7.3E-13 91.3 21.9 263 50-331 16-287 (314)
26 KOG1582 UDP-galactose transpor 99.1 5.6E-09 1.2E-13 94.0 15.2 207 122-331 109-319 (367)
27 KOG2765 Predicted membrane pro 99.0 5.8E-09 1.3E-13 97.8 15.2 202 125-332 165-378 (416)
28 KOG1441 Glucose-6-phosphate/ph 99.0 1.3E-09 2.9E-14 102.0 10.4 206 119-332 83-295 (316)
29 KOG1583 UDP-N-acetylglucosamin 99.0 2.1E-10 4.6E-15 103.2 3.7 207 121-332 66-302 (330)
30 COG5006 rhtA Threonine/homoser 99.0 5.7E-07 1.2E-11 80.5 24.0 249 50-332 17-270 (292)
31 PF00892 EamA: EamA-like trans 98.9 8.4E-09 1.8E-13 82.9 10.8 123 57-190 2-125 (126)
32 COG2510 Predicted membrane pro 98.9 3.4E-08 7.4E-13 79.4 11.6 132 51-191 8-139 (140)
33 PF13536 EmrE: Multidrug resis 98.8 2.6E-08 5.5E-13 80.0 9.9 71 122-193 37-108 (113)
34 KOG2766 Predicted membrane pro 98.8 1.4E-09 3.1E-14 97.0 0.1 242 65-330 38-285 (336)
35 PF06800 Sugar_transport: Suga 98.6 1.7E-05 3.7E-10 72.8 20.5 201 116-327 42-250 (269)
36 PF03151 TPT: Triose-phosphate 98.5 3.8E-06 8.3E-11 70.4 14.5 139 49-189 3-151 (153)
37 COG5070 VRG4 Nucleotide-sugar 98.5 8.9E-06 1.9E-10 71.7 16.0 262 55-329 11-281 (309)
38 KOG1442 GDP-fucose transporter 98.5 8.7E-07 1.9E-11 80.1 9.9 201 126-331 109-314 (347)
39 TIGR00950 2A78 Carboxylate/Ami 98.5 7.5E-06 1.6E-10 74.7 16.4 132 46-187 128-260 (260)
40 PF03151 TPT: Triose-phosphate 98.4 5.6E-06 1.2E-10 69.4 13.1 128 205-332 1-141 (153)
41 KOG4314 Predicted carbohydrate 98.4 3.5E-06 7.6E-11 72.9 10.9 100 128-230 62-161 (290)
42 PRK15051 4-amino-4-deoxy-L-ara 98.4 2.9E-06 6.2E-11 68.0 9.7 75 116-190 34-108 (111)
43 PTZ00343 triose or hexose phos 98.2 6.6E-05 1.4E-09 72.1 15.8 142 47-190 195-347 (350)
44 TIGR00817 tpt Tpt phosphate/ph 98.1 1.6E-05 3.5E-10 74.6 10.6 141 47-192 146-294 (302)
45 PRK11689 aromatic amino acid e 98.1 9.8E-05 2.1E-09 69.1 15.8 132 47-192 157-288 (295)
46 PRK10532 threonine and homoser 98.1 0.00021 4.5E-09 66.9 16.2 134 46-192 148-282 (293)
47 PLN00411 nodulin MtN21 family 98.1 0.0002 4.3E-09 69.0 16.3 62 131-192 268-329 (358)
48 TIGR03340 phn_DUF6 phosphonate 98.0 6.4E-05 1.4E-09 69.8 11.0 62 127-188 219-280 (281)
49 PRK11272 putative DMT superfam 98.0 0.00027 5.9E-09 66.0 15.1 135 47-192 151-286 (292)
50 PF00892 EamA: EamA-like trans 97.9 4.3E-05 9.2E-10 61.1 8.0 114 214-332 1-114 (126)
51 COG2510 Predicted membrane pro 97.9 4.1E-05 8.8E-10 61.9 7.4 118 205-332 4-127 (140)
52 TIGR00776 RhaT RhaT L-rhamnose 97.8 0.00033 7.1E-09 65.5 12.9 133 45-191 151-288 (290)
53 PRK11453 O-acetylserine/cystei 97.8 0.0015 3.2E-08 61.2 16.2 63 130-192 226-288 (299)
54 PF05653 Mg_trans_NIPA: Magnes 97.7 0.002 4.4E-08 60.5 16.4 65 127-191 58-122 (300)
55 PRK10452 multidrug efflux syst 97.7 0.00039 8.5E-09 56.3 10.0 71 122-192 33-104 (120)
56 PRK02971 4-amino-4-deoxy-L-ara 97.7 0.00036 7.8E-09 57.3 9.1 68 127-194 56-125 (129)
57 PRK11431 multidrug efflux syst 97.6 0.00049 1.1E-08 54.4 9.5 70 122-191 32-102 (105)
58 PF08449 UAA: UAA transporter 97.6 0.0012 2.7E-08 62.0 14.0 144 47-192 155-298 (303)
59 PRK13499 rhamnose-proton sympo 97.6 0.056 1.2E-06 51.7 24.8 167 46-220 7-190 (345)
60 PRK10650 multidrug efflux syst 97.6 0.00057 1.2E-08 54.4 9.5 69 122-190 38-107 (109)
61 PRK15430 putative chlorampheni 97.6 0.003 6.4E-08 59.2 15.9 65 128-192 222-286 (296)
62 COG2076 EmrE Membrane transpor 97.6 0.00056 1.2E-08 53.8 9.2 70 122-191 33-103 (106)
63 PRK09541 emrE multidrug efflux 97.6 0.00074 1.6E-08 53.9 9.5 71 122-192 33-104 (110)
64 COG5006 rhtA Threonine/homoser 97.4 0.0041 8.8E-08 56.2 13.1 60 130-189 221-280 (292)
65 PF06800 Sugar_transport: Suga 97.4 0.004 8.8E-08 57.3 12.8 124 41-180 133-256 (269)
66 TIGR00688 rarD rarD protein. T 97.2 0.01 2.2E-07 54.2 13.7 125 204-332 2-130 (256)
67 COG0697 RhaT Permeases of the 97.2 0.034 7.4E-07 50.7 17.1 77 116-192 211-288 (292)
68 KOG1441 Glucose-6-phosphate/ph 96.9 0.002 4.4E-08 60.7 6.6 141 47-190 164-306 (316)
69 PF10639 UPF0546: Uncharacteri 96.9 0.0035 7.6E-08 50.1 7.0 69 121-189 43-112 (113)
70 PF00893 Multi_Drug_Res: Small 96.8 0.0056 1.2E-07 47.3 7.4 58 124-181 34-92 (93)
71 PRK02971 4-amino-4-deoxy-L-ara 96.8 0.026 5.7E-07 46.3 11.4 107 204-332 2-110 (129)
72 PF05653 Mg_trans_NIPA: Magnes 96.2 0.023 5.1E-07 53.4 8.8 108 200-332 3-110 (300)
73 PRK15051 4-amino-4-deoxy-L-ara 96.1 0.13 2.9E-06 40.9 11.4 53 280-332 45-97 (111)
74 PF06027 DUF914: Eukaryotic pr 95.9 0.33 7.1E-06 46.4 15.1 140 46-193 168-307 (334)
75 TIGR00803 nst UDP-galactose tr 95.8 0.17 3.7E-06 45.1 11.9 67 122-188 155-221 (222)
76 PF13536 EmrE: Multidrug resis 95.6 0.14 3.1E-06 40.6 9.6 54 278-332 41-94 (113)
77 KOG2922 Uncharacterized conser 95.1 0.15 3.2E-06 47.8 9.3 64 129-192 74-137 (335)
78 PRK13499 rhamnose-proton sympo 94.6 1.6 3.4E-05 41.9 15.0 75 116-191 257-341 (345)
79 PF04657 DUF606: Protein of un 94.4 2.5 5.5E-05 35.0 14.3 121 54-188 13-138 (138)
80 KOG1580 UDP-galactose transpor 94.0 0.091 2E-06 47.2 4.9 68 124-191 246-313 (337)
81 COG4975 GlcU Putative glucose 93.9 0.0043 9.3E-08 55.8 -3.7 247 53-330 9-267 (288)
82 COG2962 RarD Predicted permeas 93.8 3.5 7.5E-05 38.4 14.9 129 53-192 155-284 (293)
83 KOG1581 UDP-galactose transpor 93.8 0.63 1.4E-05 43.4 10.0 108 73-188 197-310 (327)
84 COG4975 GlcU Putative glucose 91.8 0.018 4E-07 51.9 -2.6 112 53-180 159-270 (288)
85 PF00893 Multi_Drug_Res: Small 91.6 1.6 3.5E-05 33.5 8.3 52 281-332 38-90 (93)
86 PRK09541 emrE multidrug efflux 90.7 1.3 2.8E-05 35.2 7.2 55 277-332 35-91 (110)
87 PRK10452 multidrug efflux syst 89.6 1.7 3.6E-05 35.2 7.0 55 277-332 35-91 (120)
88 PF04142 Nuc_sug_transp: Nucle 88.6 19 0.00041 32.8 14.7 128 46-180 114-242 (244)
89 COG5070 VRG4 Nucleotide-sugar 87.8 4.9 0.00011 36.1 9.2 132 54-191 163-296 (309)
90 PRK10650 multidrug efflux syst 87.3 13 0.00028 29.5 11.0 53 279-332 42-96 (109)
91 COG2076 EmrE Membrane transpor 86.8 3.1 6.7E-05 32.8 6.7 56 276-332 34-91 (106)
92 PRK11431 multidrug efflux syst 85.8 4.3 9.3E-05 32.0 7.1 53 279-332 36-90 (105)
93 KOG4831 Unnamed protein [Funct 85.2 8.8 0.00019 30.2 8.3 67 121-188 54-122 (125)
94 KOG4510 Permease of the drug/m 83.5 2.8 6.2E-05 38.6 5.8 125 52-187 197-321 (346)
95 COG3238 Uncharacterized protei 82.6 28 0.00061 29.3 11.7 71 122-192 72-147 (150)
96 PF04657 DUF606: Protein of un 81.3 29 0.00063 28.6 12.6 122 206-332 3-129 (138)
97 KOG2922 Uncharacterized conser 81.1 2 4.4E-05 40.5 4.0 107 201-332 18-124 (335)
98 KOG2765 Predicted membrane pro 81.0 45 0.00098 32.4 13.0 145 45-194 246-393 (416)
99 KOG1444 Nucleotide-sugar trans 78.4 12 0.00027 35.2 8.3 142 47-191 158-300 (314)
100 PF10639 UPF0546: Uncharacteri 77.8 20 0.00043 28.6 8.3 99 211-332 3-102 (113)
101 KOG1583 UDP-N-acetylglucosamin 76.4 9.8 0.00021 35.3 6.8 116 67-190 186-313 (330)
102 PF05297 Herpes_LMP1: Herpesvi 57.6 3.4 7.4E-05 38.2 0.0 95 137-236 41-137 (381)
103 KOG1443 Predicted integral mem 54.0 33 0.00073 32.4 5.8 74 117-190 241-314 (349)
104 COG3169 Uncharacterized protei 53.8 88 0.0019 24.4 7.1 32 158-189 82-113 (116)
105 PF04342 DUF486: Protein of un 50.4 73 0.0016 25.1 6.3 50 139-188 55-105 (108)
106 PF12270 Cyt_c_ox_IV: Cytochro 49.1 1.5E+02 0.0033 24.5 11.8 67 202-290 34-106 (137)
107 PF06379 RhaT: L-rhamnose-prot 44.3 2.5E+02 0.0054 27.0 10.1 85 201-297 4-98 (344)
108 PF06609 TRI12: Fungal trichot 35.9 5.2E+02 0.011 26.9 13.0 22 171-192 236-257 (599)
109 PF07857 DUF1632: CEO family ( 35.6 1.1E+02 0.0024 28.1 6.2 19 205-223 1-19 (254)
110 PRK11901 hypothetical protein; 34.9 59 0.0013 30.9 4.3 26 5-32 3-28 (327)
111 PF06379 RhaT: L-rhamnose-prot 34.8 3.1E+02 0.0067 26.4 9.2 108 117-224 71-193 (344)
112 PF06123 CreD: Inner membrane 32.3 5.2E+02 0.011 25.7 11.1 60 165-231 317-378 (430)
113 KOG1442 GDP-fucose transporter 32.0 34 0.00073 31.9 2.2 74 115-188 251-324 (347)
114 PF05915 DUF872: Eukaryotic pr 28.7 3E+02 0.0066 21.9 7.6 10 3-12 1-10 (115)
115 COG4720 Predicted membrane pro 24.7 4.6E+02 0.01 22.7 8.5 38 282-319 119-162 (177)
116 PRK02237 hypothetical protein; 22.5 2.7E+02 0.0059 22.1 5.4 47 147-193 61-107 (109)
No 1
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.2e-56 Score=412.10 Aligned_cols=286 Identities=38% Similarity=0.606 Sum_probs=259.5
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhh--cCC--CCCCcccccchhhhh
Q 019956 46 RKSVVTLALTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNH--EGV--TDDNRLSTTLDEVIV 121 (333)
Q Consensus 46 ~~~~~l~ll~l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~--~~~--~~~~~~~~~~~~~~~ 121 (333)
.+++.++.+++++++.++..|++++.++++|.|++++++.|++|+++|..+++++.++ ++. ...+.....|++.++
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 7899999999999999999999999889999999999999999999999999654322 111 011122245678999
Q ss_pred hhhhHHHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhccccc---CCC---
Q 019956 122 YPIPAVLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLN---SNS--- 195 (333)
Q Consensus 122 ~~ipally~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~---~~~--- 195 (333)
.++|+++|++||+++|++++|+|+++||+.+|+|+++||++++++|+||++++||.++++++.|++++|.+ +.+
T Consensus 95 ~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~ 174 (345)
T KOG2234|consen 95 VSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKS 174 (345)
T ss_pred HHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999943 211
Q ss_pred CccccchhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCccccchHHH
Q 019956 196 DRVLQTPLQGWIMAIVMALLSGFAGVYTEAIMKKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVMNKGFFHGYSFIT 275 (333)
Q Consensus 196 ~~~~~~~~~G~~l~l~aa~~sala~v~~e~~lk~~~~~~~~~~n~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 275 (333)
+...+++..|...++++|++||+++||+||++|+.+. +.|+||+||+++|++++++..+..|++++.+.|||+||+..+
T Consensus 175 ~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~-s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~v 253 (345)
T KOG2234|consen 175 ESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNV-SLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIV 253 (345)
T ss_pred CCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHH
Confidence 2234578899999999999999999999999999876 899999999999999999999889998888889999999999
Q ss_pred HHHHHHHHHHhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 276 VLMILNHALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 276 ~~~i~~~a~gg~~v~~v~k~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
|.+++.+|+||+++++++||+|||.|.|++++++++++++|+.+||.+||..|++|+
T Consensus 254 w~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~ 310 (345)
T KOG2234|consen 254 WLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGA 310 (345)
T ss_pred HHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999996
No 2
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=100.00 E-value=1.6e-45 Score=334.55 Aligned_cols=219 Identities=41% Similarity=0.738 Sum_probs=204.7
Q ss_pred ccchhhhhhhhhHHHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccC
Q 019956 114 TTLDEVIVYPIPAVLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNS 193 (333)
Q Consensus 114 ~~~~~~~~~~ipally~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~ 193 (333)
.++|+.+++++||++|++||++.|++++++||++||+++|+|+++||++++++||||++++||.|++++++|+++++.++
T Consensus 12 ~~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~ 91 (244)
T PF04142_consen 12 KSPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSS 91 (244)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999764
Q ss_pred CCC------c------cccchhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 019956 194 NSD------R------VLQTPLQGWIMAIVMALLSGFAGVYTEAIMKKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDA 261 (333)
Q Consensus 194 ~~~------~------~~~~~~~G~~l~l~aa~~sala~v~~e~~lk~~~~~~~~~~n~~l~~~~~~~~~~~~~~~~~~~ 261 (333)
..+ + ...++..|+++++++++++|+++||+||++|+.+. ++|.||+|++++|++++++.....|+++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~-s~~~~N~qL~~~gi~~~~~~~~~~~~~~ 170 (244)
T PF04142_consen 92 SQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNV-SLWIQNMQLYLFGILFNLLALLLSDGSA 170 (244)
T ss_pred ccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccch-hHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 322 0 12356789999999999999999999999999874 8999999999999999999887888888
Q ss_pred hhhcCccccchHHHHHHHHHHHHHhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhcccC
Q 019956 262 VMNKGFFHGYSFITVLMILNHALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGSM 333 (333)
Q Consensus 262 ~~~~~~~~g~~~~~~~~i~~~a~gg~~v~~v~k~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~lG~~ 333 (333)
+.+.|||+||++++|.+++.+++||+++++++||+||+.|.|++.++++++.++|+++||.++|..+++|+.
T Consensus 171 ~~~~g~f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~ 242 (244)
T PF04142_consen 171 ISESGFFHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAA 242 (244)
T ss_pred cccCCchhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhhee
Confidence 889999999999999999999999999999999999999999999999999999999999999999999974
No 3
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.93 E-value=2.5e-25 Score=199.98 Aligned_cols=209 Identities=29% Similarity=0.441 Sum_probs=188.5
Q ss_pred hhhhHHHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccCCCC--ccc
Q 019956 122 YPIPAVLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNSNSD--RVL 199 (333)
Q Consensus 122 ~~ipally~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~~~~--~~~ 199 (333)
+.+|+..|+.+|.+.++++.+.++...+.. |.|++.++++...+++++++..||.++.++..|+..++.++..+ ...
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~-~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~ 80 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVT-QLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMF 80 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccceeee-hHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcccccc
Confidence 578999999999999999999999999999 99999999999999999999999999999999999888664321 112
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCccccchHHHHHHH
Q 019956 200 QTPLQGWIMAIVMALLSGFAGVYTEAIMKKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVMNKGFFHGYSFITVLMI 279 (333)
Q Consensus 200 ~~~~~G~~l~l~aa~~sala~v~~e~~lk~~~~~~~~~~n~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i 279 (333)
++...|..+++.++++++++++|+|+..|+++. +.|.+|+++++++.+.+.......+++...+.+++++++...|..+
T Consensus 81 g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (222)
T TIGR00803 81 GNPVVGLSAVLSALLSSGFAGVYFEKILKDGDT-MFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVG 159 (222)
T ss_pred ccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCC-chHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHH
Confidence 356789999999999999999999999887654 7999999999999998766665566666667788999999999999
Q ss_pred HHHHHHhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 280 LNHALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 280 ~~~a~gg~~v~~v~k~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
+.++++|+++++++||+|++.|.+++..+++++.++|+++|||+++..+++|+
T Consensus 160 ~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~ 212 (222)
T TIGR00803 160 LLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGA 212 (222)
T ss_pred HHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999986
No 4
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.90 E-value=2.3e-21 Score=185.73 Aligned_cols=272 Identities=13% Similarity=0.118 Sum_probs=191.2
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhhhhhhhH
Q 019956 47 KSVVTLALTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVIVYPIPA 126 (333)
Q Consensus 47 ~~~~l~ll~l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ipa 126 (333)
.|..+++.=+.+++..++.|..-++|- +|....+.|..+..++.+++.+ +++++. ++.+.+|++...+++.+
T Consensus 14 ~~~~~~~~q~~~~~~~~~~k~a~~~G~---~~~~~~~~R~~iA~l~Ll~~~~--~~~~~~---~~~~~~~~~~~~l~l~g 85 (358)
T PLN00411 14 FLTAMLATETSVVGISTLFKVATSKGL---NIYPFLGYSYLLASLLLLPSLF--FTNRSR---SLPPLSVSILSKIGLLG 85 (358)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHCCC---CccHHHHHHHHHHHHHHHHHHH--HHHHhc---ccCcchHHHHHHHHHHH
Confidence 456666666677777778888765554 4666789999888777666553 222211 11123467777788888
Q ss_pred HHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHH------hcCccCHHHHHHHHHHHhhhhcccccCCCC----
Q 019956 127 VLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRII------LKKKLSEIQWAAFILLCCGCTTAQLNSNSD---- 196 (333)
Q Consensus 127 lly~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~------Lkekls~~qw~al~ll~~Gv~~v~~~~~~~---- 196 (333)
++.+.++.+.|.+++|++++..+++.++.|++|+++++++ +|||++++||+++++.++|+.++..+++..
T Consensus 86 ~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~ 165 (358)
T PLN00411 86 FLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVA 165 (358)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccc
Confidence 8776788899999999999999999999999999999999 699999999999999999999876432110
Q ss_pred ----------------ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHH-HHHHHHHHHHHHHhhh
Q 019956 197 ----------------RVLQTPLQGWIMAIVMALLSGFAGVYTEAIMKKRPSRNINVQNFWLY-VFGMAFNAVAIVIQDF 259 (333)
Q Consensus 197 ----------------~~~~~~~~G~~l~l~aa~~sala~v~~e~~lk~~~~~~~~~~n~~l~-~~~~~~~~~~~~~~~~ 259 (333)
....+...|.+++++++++||++.+..++..++++. ....+.+.. +.+..+..+....++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~--~~~~t~~~~~~~~~~~~~~~l~~~~~ 243 (358)
T PLN00411 166 SSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPA--AFTVSFLYTVCVSIVTSMIGLVVEKN 243 (358)
T ss_pred cccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc--HhHHHHHHHHHHHHHHHHHHHHHccC
Confidence 001123559999999999999999999999888764 323233333 3333333333322211
Q ss_pred hhhhhcCccccchHHHHHHHHHHH----HHhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 260 DAVMNKGFFHGYSFITVLMILNHA----LSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 260 ~~~~~~~~~~g~~~~~~~~i~~~a----~gg~~v~~v~k~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
+.. .....++... ..+++.+ ++..+....+|+.++..........|++++++|++++||++++.+++|+
T Consensus 244 ~~~---~~~~~~~~~~-~~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~ 316 (358)
T PLN00411 244 NPS---VWIIHFDITL-ITIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGG 316 (358)
T ss_pred Ccc---cceeccchHH-HHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHH
Confidence 100 0011222222 2233333 3455555677889999999999999999999999999999999999986
No 5
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.88 E-value=2.6e-20 Score=174.45 Aligned_cols=264 Identities=13% Similarity=0.109 Sum_probs=183.7
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhhhhhhh
Q 019956 46 RKSVVTLALTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVIVYPIP 125 (333)
Q Consensus 46 ~~~~~l~ll~l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ip 125 (333)
+..+..++..+.|+.+.+..|.. ++++|.+.++.|.++..++.+++.. .+++.. ...+..+++++.......
T Consensus 8 ~g~~~~l~a~~~wg~~~~~~k~~-----~~~~~~~~~~~R~~~a~~~l~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~ 79 (296)
T PRK15430 8 QGVLLALAAYFIWGIAPAYFKLI-----YYVPADEILTHRVIWSFFFMVVLMS--ICRQWS-YLKTLIQTPQKIFMLAVS 79 (296)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHH--HHccHH-HHHHHHcCHHHHHHHHHH
Confidence 34566667788999999999875 3478999999999998765555442 221110 000111234554444566
Q ss_pred HHHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccCCCCccccchhhH
Q 019956 126 AVLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNSNSDRVLQTPLQG 205 (333)
Q Consensus 126 ally~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~~~~~~~~~~~~G 205 (333)
++...+++.+.|++++++|+++.+++.++.|+++++++++++|||++++||.++++.++|+.++..+.+ + .
T Consensus 80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~-~----~---- 150 (296)
T PRK15430 80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFG-S----L---- 150 (296)
T ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcC-C----c----
Confidence 677889999999999999999999999999999999999999999999999999999999998764321 1 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCccccchHH--HHHHHHHHH
Q 019956 206 WIMAIVMALLSGFAGVYTEAIMKKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVMNKGFFHGYSFI--TVLMILNHA 283 (333)
Q Consensus 206 ~~l~l~aa~~sala~v~~e~~lk~~~~~~~~~~n~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~i~~~a 283 (333)
....+++++++|++.++.||..++... .....+.+...++.+.... ...+...... ......+ .....+..+
T Consensus 151 ~~~~l~aa~~~a~~~i~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~~g~~t~ 224 (296)
T PRK15430 151 PIIALGLAFSFAFYGLVRKKIAVEAQT-GMLIETMWLLPVAAIYLFA--IADSSTSHMG---QNPMSLNLLLIAAGIVTT 224 (296)
T ss_pred cHHHHHHHHHHHHHHHHHHhcCCCCch-hHHHHHHHHHHHHHHHHHH--HccCCccccc---CCcHHHHHHHHHHHHHHH
Confidence 145778899999999999886432211 2233333333333322111 1111000000 0011111 111222456
Q ss_pred HHhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 284 LSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 284 ~gg~~v~~v~k~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
++..+....+|+.++......++..|+++.+++++++||+++..+++|.
T Consensus 225 i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~ 273 (296)
T PRK15430 225 VPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTF 273 (296)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 7788888999999999999999999999999999999999999999885
No 6
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.88 E-value=4.9e-20 Score=173.20 Aligned_cols=246 Identities=20% Similarity=0.288 Sum_probs=189.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhhhhhhhHHHHHHHHHHHHHHHHcCChhHHHHHHhhHH
Q 019956 77 SVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVIVYPIPAVLYLVKNLLQYYIFAYVDAPGYQILKNLNI 156 (333)
Q Consensus 77 ~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ipally~~~n~l~~~al~~l~~~~~~vl~~~k~ 156 (333)
.|....++..+.-.+++..... ..+. ++ .+......+.++++++.+.+.+.+.+++|+|.+++++++++|+
T Consensus 31 ~~~~lt~~q~~~~~~~~~~~~~---~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~ 101 (303)
T PF08449_consen 31 FPLFLTFVQFAFNALFSFILLS---LFKF---PK---SRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQIVFKSSKP 101 (303)
T ss_pred ccHHHHHHHHHHHHHHHHHHHH---hccc---cC---CCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHH
Confidence 4777788888887777766552 2111 01 1123345688999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccCCCCcc-----ccchhhHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 019956 157 ISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNSNSDRV-----LQTPLQGWIMAIVMALLSGFAGVYTEAIMKKRP 231 (333)
Q Consensus 157 l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~~~~~~-----~~~~~~G~~l~l~aa~~sala~v~~e~~lk~~~ 231 (333)
++|++++++++|||++++||.++++.++|+++....+..+.. ......|+++++++.++.|+.++++||++++++
T Consensus 102 i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~ 181 (303)
T PF08449_consen 102 IPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQEKLFKKYG 181 (303)
T ss_pred HHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999998765432211 112234999999999999999999999999887
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHh-hhhhhhhcCccccchHHHH---HHHHHHHHHhHHHHHHhhhhhhHHHHHHHHH
Q 019956 232 SRNINVQNFWLYVFGMAFNAVAIVIQ-DFDAVMNKGFFHGYSFITV---LMILNHALSGIAVSMVMKYADNIVKVYSTSV 307 (333)
Q Consensus 232 ~~~~~~~n~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~---~~i~~~a~gg~~v~~v~k~~~~i~k~~~~~~ 307 (333)
. +.+....+..+++.++.++..... .++......+...++...+ ...+.+++|...+....|..++......+++
T Consensus 182 ~-~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~ 260 (303)
T PF08449_consen 182 K-SPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVTTL 260 (303)
T ss_pred C-cHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHH
Confidence 6 567777778888888877665541 1111111112223333222 2223677888888888999999999999999
Q ss_pred HHHHHHHHHHHHcCCCcchhhhccc
Q 019956 308 AMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 308 ~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
+.++++++|+++||+++++.+++|.
T Consensus 261 Rk~~sillS~~~f~~~~~~~~~~G~ 285 (303)
T PF08449_consen 261 RKFLSILLSVIIFGHPLSPLQWIGI 285 (303)
T ss_pred HHHHHHHHHHHhcCCcCChHHHHHH
Confidence 9999999999999999999999986
No 7
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.87 E-value=2.4e-19 Score=168.11 Aligned_cols=262 Identities=14% Similarity=0.115 Sum_probs=176.0
Q ss_pred HHHHHHHHHHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhhhhhhhHHH
Q 019956 49 VVTLALTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVIVYPIPAVL 128 (333)
Q Consensus 49 ~~l~ll~l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ipall 128 (333)
+..++.++.|+++.+.+|.. -++.+|...+++|..+..++.+++. ++++ ..++....+ +++
T Consensus 7 l~~l~~~~~Wg~~~~~~k~~----~~~~~p~~~~~~R~~~a~~~l~~~~----~~~~--------~~~~~~~~~---g~~ 67 (299)
T PRK11453 7 VLALLVVVVWGLNFVVIKVG----LHNMPPLMLAGLRFMLVAFPAIFFV----ARPK--------VPLNLLLGY---GLT 67 (299)
T ss_pred HHHHHHHHHHhhhHHHHHHH----HhcCCHHHHHHHHHHHHHHHHHHHh----cCCC--------CchHHHHHH---HHH
Confidence 45667789999999999986 3468899999999987654433322 2111 112322222 332
Q ss_pred -HHHHHHHHHHHHHc-CChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccCCCCccccchhhHH
Q 019956 129 -YLVKNLLQYYIFAY-VDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNSNSDRVLQTPLQGW 206 (333)
Q Consensus 129 -y~~~n~l~~~al~~-l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~~~~~~~~~~~~G~ 206 (333)
+..+..+.|.+++| +|++...++.++.|+++.+++++++|||++++||+++++.++|+.++..++..+ .+....|+
T Consensus 68 ~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~--~~~~~~G~ 145 (299)
T PRK11453 68 ISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNG--QHVAMLGF 145 (299)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCC--cchhHHHH
Confidence 34566677889987 789999999999999999999999999999999999999999998876432211 12234699
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCccccchHHHHHHHHHHHHHh
Q 019956 207 IMAIVMALLSGFAGVYTEAIMKKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVMNKGFFHGYSFITVLMILNHALSG 286 (333)
Q Consensus 207 ~l~l~aa~~sala~v~~e~~lk~~~~~~~~~~n~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~a~gg 286 (333)
++.+++++++++++++.||..++.+.......+.+....+.+.........+.+..... .+..++...|..+++.++.+
T Consensus 146 ~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~i~~ 224 (299)
T PRK11453 146 MLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIH-SLVTIDMTTILSLMYLAFVA 224 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhh-hhccCCHHHHHHHHHHHHHH
Confidence 99999999999999999998765432111111122222222211111111221110000 01123444555555544444
Q ss_pred -----HHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 287 -----IAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 287 -----~~v~~v~k~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
.+....+++.++..........|+++.++|++++||+++..+++|+
T Consensus 225 t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~ 275 (299)
T PRK11453 225 TIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGA 275 (299)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHH
Confidence 4444555777888888888999999999999999999999999986
No 8
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.87 E-value=1.5e-19 Score=168.95 Aligned_cols=256 Identities=13% Similarity=0.053 Sum_probs=182.8
Q ss_pred HHHHHHHHHHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhhhhhhhHHH
Q 019956 49 VVTLALTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVIVYPIPAVL 128 (333)
Q Consensus 49 ~~l~ll~l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ipall 128 (333)
+.+++.++.|+++.+.+|... ++.+|.+.++.|.....++.+++.. .++++ . .+.++.....+.+.+
T Consensus 11 ~~~~~~~~iWg~~~~~~K~~~----~~~~p~~~~~~R~~~a~l~ll~~~~--~~~~~---~----~~~~~~~~~~~~g~~ 77 (292)
T PRK11272 11 GALFALYIIWGSTYLVIRIGV----ESWPPLMMAGVRFLIAGILLLAFLL--LRGHP---L----PTLRQWLNAALIGLL 77 (292)
T ss_pred HHHHHHHHHHhhHHHHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHHH--HhCCC---C----CcHHHHHHHHHHHHH
Confidence 456678899999999999873 3568999999999998776655542 22211 1 112333345556655
Q ss_pred H-HHHHHHHHHHH-HcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccCCCCccccchhhHH
Q 019956 129 Y-LVKNLLQYYIF-AYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNSNSDRVLQTPLQGW 206 (333)
Q Consensus 129 y-~~~n~l~~~al-~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~~~~~~~~~~~~G~ 206 (333)
. ..++.+.+.+. +++++++..++.++.|+++++++.+ +|||++++||.++++.++|+.++..+++. +....|+
T Consensus 78 ~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~----~~~~~G~ 152 (292)
T PRK11272 78 LLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNL----SGNPWGA 152 (292)
T ss_pred HHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCccc----ccchHHH
Confidence 4 56888999999 9999999999999999999999985 79999999999999999999887543221 1335799
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCccccchHHHHHHH-----HH
Q 019956 207 IMAIVMALLSGFAGVYTEAIMKKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVMNKGFFHGYSFITVLMI-----LN 281 (333)
Q Consensus 207 ~l~l~aa~~sala~v~~e~~lk~~~~~~~~~~n~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i-----~~ 281 (333)
++.+++++++|+++++.||..+++ +......++...+.+.... ....+.. . ....+...|..+ +.
T Consensus 153 l~~l~a~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~-~-----~~~~~~~~~~~i~~l~i~~ 222 (292)
T PRK11272 153 ILILIASASWAFGSVWSSRLPLPV---GMMAGAAEMLAAGVVLLIA-SLLSGER-L-----TALPTLSGFLALGYLAVFG 222 (292)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCc---chHHHHHHHHHHHHHHHHH-HHHcCCc-c-----cccCCHHHHHHHHHHHHHH
Confidence 999999999999999999875432 2333333433333333222 2211111 0 001122333333 34
Q ss_pred HHHHhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 282 HALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 282 ~a~gg~~v~~v~k~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
++++..+....+|+.++..........|+++.+++++++||++|..+++|+
T Consensus 223 s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~ 273 (292)
T PRK11272 223 SIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLAL 273 (292)
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHH
Confidence 455556666777888888888889999999999999999999999999985
No 9
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.86 E-value=2.6e-19 Score=168.77 Aligned_cols=264 Identities=17% Similarity=0.221 Sum_probs=191.3
Q ss_pred HHHHHhHHHHHHH-HhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhhhhhhhHHHHHHH
Q 019956 54 LTVLTSSQAILIV-WSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVIVYPIPAVLYLVK 132 (333)
Q Consensus 54 l~l~~~~~~ll~~-~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ipally~~~ 132 (333)
+.++.++...... .+++ |- + -|..-.+..++.-.++-..... +|++.. +......++.++|.+.|+++...
T Consensus 21 lsl~~~~t~~~s~~l~~~-~~-~-~P~~Qs~~~Y~~l~~vy~~~~~--~r~~~~---~~~~~~~~~~w~y~lla~~Dv~a 92 (334)
T PF06027_consen 21 LSLCITGTGTFSSLLANK-GV-N-IPTFQSFFNYVLLALVYTPILL--YRRGFK---KWLKVLKRPWWKYFLLALLDVEA 92 (334)
T ss_pred HHHHHHhHHHHHHHHHhc-Cc-c-CcHHHHHHHHHHHHHHHhhhhh--hccccc---cchhhcchhHHHHHHHHHHHHHH
Confidence 4444444444443 3433 22 2 2555566666554333222221 332211 11111235567899999999999
Q ss_pred HHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccCC----CCccccchhhHHHH
Q 019956 133 NLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNSN----SDRVLQTPLQGWIM 208 (333)
Q Consensus 133 n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~~----~~~~~~~~~~G~~l 208 (333)
|.+...|++|++.+..|++.++.++++.++|+++||+|+++.||+|+++.+.|+.++...+. ++...+++..|+++
T Consensus 93 N~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll 172 (334)
T PF06027_consen 93 NYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLL 172 (334)
T ss_pred HHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHH
Confidence 99999999999999999999999999999999999999999999999999999888765532 11234578899999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCccccchHHHHHHHH----HHHH
Q 019956 209 AIVMALLSGFAGVYTEAIMKKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVMNKGFFHGYSFITVLMIL----NHAL 284 (333)
Q Consensus 209 ~l~aa~~sala~v~~e~~lk~~~~~~~~~~n~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~----~~a~ 284 (333)
+++++++.|+++|+.|+..|+.+ ......++.++|.+++.+.....|+++..+. .|++..+...+ ...+
T Consensus 173 ~l~~a~lya~~nV~~E~~v~~~~---~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~----~w~~~~~~~~v~~~~~lf~ 245 (334)
T PF06027_consen 173 ALLGAILYAVSNVLEEKLVKKAP---RVEFLGMLGLFGFIISGIQLAILERSGIESI----HWTSQVIGLLVGYALCLFL 245 (334)
T ss_pred HHHHHHHHHHHHHHHHHhcccCC---HHHHHHHHHHHHHHHHHHHHHheehhhhhcc----CCChhhHHHHHHHHHHHHH
Confidence 99999999999999999998765 3444567788998888876665666554431 12333222221 2344
Q ss_pred HhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 285 SGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 285 gg~~v~~v~k~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
...++..++++.++...+.....+.+++.+.++++||+++++..++|.
T Consensus 246 ~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af 293 (334)
T PF06027_consen 246 FYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAF 293 (334)
T ss_pred HHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHH
Confidence 556778889999999888888889999999999999999999888763
No 10
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.86 E-value=1.5e-18 Score=166.25 Aligned_cols=247 Identities=13% Similarity=0.146 Sum_probs=171.9
Q ss_pred cch-HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccc-hhhhhhhhhHHHHHHHHHHHHHHHHcCChhHHHHHH
Q 019956 75 EYS-VTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTL-DEVIVYPIPAVLYLVKNLLQYYIFAYVDAPGYQILK 152 (333)
Q Consensus 75 ~~~-~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~ipally~~~n~l~~~al~~l~~~~~~vl~ 152 (333)
.++ |.+...++.++..+++..+.. .+.+ ..++. .++ ++.......|+++...+...+.++++.+++.+++++
T Consensus 74 ~~~~P~~l~~~~~~~~~l~~~~~~~--~~~~---~~~~~-~~~~~~~~~llp~gl~~~~~~~~~~~sl~~~svs~~~iik 147 (350)
T PTZ00343 74 MLPLPWTISSLQLFVGWLFALLYWA--TGFR---KIPRI-KSLKLFLKNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVK 147 (350)
T ss_pred hCChhHHHHHHHHHHHHHHHHHHHH--hCCC---CCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 356 999999999988766544321 1111 11221 112 234456677777777777788999999999999999
Q ss_pred hhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccCCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 019956 153 NLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNSNSDRVLQTPLQGWIMAIVMALLSGFAGVYTEAIMKKRPS 232 (333)
Q Consensus 153 ~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~~~~~~~~~~~~G~~l~l~aa~~sala~v~~e~~lk~~~~ 232 (333)
.+.|++|++++++++|||+++++|.++++.++|+.+...++. +....|+++.+++++++++++++.||.+++.+.
T Consensus 148 a~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~-----~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~ 222 (350)
T PTZ00343 148 AAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKEL-----HFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSE 222 (350)
T ss_pred HhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccc-----hhHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 999999999999999999999999999999999999764311 123569999999999999999999999876431
Q ss_pred C--chHHHHHHH--HHHHHHHHHHHHHHhhhhhhhh---c--CccccchH-HHHHHHHHHHHHhHHHH----HHhhhhhh
Q 019956 233 R--NINVQNFWL--YVFGMAFNAVAIVIQDFDAVMN---K--GFFHGYSF-ITVLMILNHALSGIAVS----MVMKYADN 298 (333)
Q Consensus 233 ~--~~~~~n~~l--~~~~~~~~~~~~~~~~~~~~~~---~--~~~~g~~~-~~~~~i~~~a~gg~~v~----~v~k~~~~ 298 (333)
. +....|.+. ...|.++.++.....|+..... . ..+..+.. ..+..++.+++.+.+.. +.+++.++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~ 302 (350)
T PTZ00343 223 IGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQ 302 (350)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 0 111223333 4466666665544333211100 0 00111111 12223334444444444 47788899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 299 IVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 299 i~k~~~~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
+....+..+.+++++++|+++|||++|..+++|.
T Consensus 303 ~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~ 336 (350)
T PTZ00343 303 VTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGM 336 (350)
T ss_pred hHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHH
Confidence 9999999999999999999999999999999986
No 11
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.86 E-value=2.4e-19 Score=164.08 Aligned_cols=249 Identities=14% Similarity=0.119 Sum_probs=178.4
Q ss_pred HhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhhhhhhhHHH-HHHHHHHH
Q 019956 58 TSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVIVYPIPAVL-YLVKNLLQ 136 (333)
Q Consensus 58 ~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ipall-y~~~n~l~ 136 (333)
|+...+..|+.-++ ..++....+.|-+...++..+.. +++ . . .++...+.+.+.+ ..+++.+.
T Consensus 1 Wg~~~~~~k~~~~~---~~~~~~~~~~r~~~~~l~l~~~~---~~~-~------~---~~~~~~~~~~~~~~~~l~~~~~ 64 (260)
T TIGR00950 1 WGTTGVVIGQYLEG---QVPLYFAVFRRLIFALLLLLPLL---RRR-P------P---LKRLLRLLLLGALQIGVFYVLY 64 (260)
T ss_pred CcchHHHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHH---Hhc-c------C---HhHHHHHHHHHHHHHHHHHHHH
Confidence 67788888886432 34677777877777655544443 222 1 1 1122234444444 57899999
Q ss_pred HHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccCCCCccccchhhHHHHHHHHHHHH
Q 019956 137 YYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNSNSDRVLQTPLQGWIMAIVMALLS 216 (333)
Q Consensus 137 ~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~~~~~~~~~~~~G~~l~l~aa~~s 216 (333)
|.|++|+|+++..++.++.|+++++++.+++|||++++||.++.+.++|+.++..+++. +....|+.+.+++++++
T Consensus 65 ~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~----~~~~~G~~~~l~a~~~~ 140 (260)
T TIGR00950 65 FVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNL----SINPAGLLLGLGSGISF 140 (260)
T ss_pred HHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcc----cccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988654321 24567999999999999
Q ss_pred HHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCccccchH--HHHHHHHHHHHHhHHHHHHhh
Q 019956 217 GFAGVYTEAIMKKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVMNKGFFHGYSF--ITVLMILNHALSGIAVSMVMK 294 (333)
Q Consensus 217 ala~v~~e~~lk~~~~~~~~~~n~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~i~~~a~gg~~v~~v~k 294 (333)
++++++.|+..++.+. +....+.+....+.++..+.....+.+ .. .+...+ ..+..++.+.++..+....+|
T Consensus 141 a~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 214 (260)
T TIGR00950 141 ALGTVLYKRLVKKEGP-ELLQFTGWVLLLGALLLLPFAWFLGPN-PQ----ALSLQWGALLYLGLIGTALAYFLWNKGLT 214 (260)
T ss_pred HHHHHHHhHHhhcCCc-hHHHHHHHHHHHHHHHHHHHHHhcCCC-CC----cchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999998876543 222222233444544444433222111 00 111111 222333455667777888899
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 295 YADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 295 ~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
+.+...........|+++++++++++||+++..+++|.
T Consensus 215 ~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~ 252 (260)
T TIGR00950 215 LVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGG 252 (260)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999885
No 12
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.85 E-value=6.1e-19 Score=165.16 Aligned_cols=257 Identities=12% Similarity=0.103 Sum_probs=178.9
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhhhhhhhH
Q 019956 47 KSVVTLALTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVIVYPIPA 126 (333)
Q Consensus 47 ~~~~l~ll~l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ipa 126 (333)
.++..++.++.|+++.+..|.. .++++|....++|..+..++.+++. ++.+ .++.++.. ...-+
T Consensus 5 ~~l~~l~a~~~Wg~~~~~~k~~----~~~~~P~~~~~~R~~~a~l~l~~~~----~~~~------~~~~~~~~--~~~~~ 68 (295)
T PRK11689 5 ATLIGLIAILLWSTMVGLIRGV----SESLGPVGGAAMIYSVSGLLLLLTV----GFPR------LRQFPKRY--LLAGG 68 (295)
T ss_pred hhHHHHHHHHHHHHHHHHHHHH----HccCChHHHHHHHHHHHHHHHHHHc----cccc------cccccHHH--HHHHh
Confidence 4566777889999999999987 5678899999999888765544332 1111 11112221 22234
Q ss_pred HHHHHHHHHHHHHHH----cCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccCCCCc-----
Q 019956 127 VLYLVKNLLQYYIFA----YVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNSNSDR----- 197 (333)
Q Consensus 127 lly~~~n~l~~~al~----~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~~~~~----- 197 (333)
+.++.++.+.|.+++ ++++.+..++..+.|+++++++++++|||++++||.++++.++|+.++..++.+.+
T Consensus 69 l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~ 148 (295)
T PRK11689 69 LLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELI 148 (295)
T ss_pred HHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhh
Confidence 445677888888775 46888899999999999999999999999999999999999999988865432110
Q ss_pred -cccchhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCccccchHHHH
Q 019956 198 -VLQTPLQGWIMAIVMALLSGFAGVYTEAIMKKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVMNKGFFHGYSFITV 276 (333)
Q Consensus 198 -~~~~~~~G~~l~l~aa~~sala~v~~e~~lk~~~~~~~~~~n~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 276 (333)
.......|+++.+++++++|+++++.||..++.+. .. ......+..+ .+.....+ +.. ...++..|
T Consensus 149 ~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~~--~~---~~~~~~~~~l-~~~~~~~~-~~~------~~~~~~~~ 215 (295)
T PRK11689 149 NNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGKNG--IT---LFFILTALAL-WIKYFLSP-QPA------MVFSLPAI 215 (295)
T ss_pred hccccChHHHHHHHHHHHHHHHHHHHHhhccCCCCc--hh---HHHHHHHHHH-HHHHHHhc-Ccc------ccCCHHHH
Confidence 01123469999999999999999999998655442 21 1111222222 22111111 111 11233333
Q ss_pred HHHH----HHHHHhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 277 LMIL----NHALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 277 ~~i~----~~a~gg~~v~~v~k~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
..++ ..+++..+....+|+.++.......+..|+++++++++++||+++..+++|.
T Consensus 216 ~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~ 275 (295)
T PRK11689 216 IKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGV 275 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHH
Confidence 3333 3445566677788999999999999999999999999999999999999986
No 13
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.83 E-value=3.4e-18 Score=160.46 Aligned_cols=261 Identities=12% Similarity=0.160 Sum_probs=174.8
Q ss_pred HHHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhhhhhhhHHHHHHHHHH
Q 019956 56 VLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVIVYPIPAVLYLVKNLL 135 (333)
Q Consensus 56 l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ipally~~~n~l 135 (333)
..+.+..+..|+.-++ . -.|....+.+.....+++.+. ++... .++.+.++++.......|++.+.++.+
T Consensus 12 ~~~~~~~~~NK~~l~~--~-~~P~~~~~~~~~~~~~~~~~~----~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~ 81 (302)
T TIGR00817 12 FLNVYFNIYNKKLLNV--F-PYPYFKTLISLAVGSLYCLLS----WSSGL---PKRLKISSALLKLLLPVAIVHTIGHVT 81 (302)
T ss_pred HHHHHHHHHHHHHHhh--C-ChhHHHHHHHHHHHHHHHHHH----HHhCC---CCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3444555566665432 1 237777788877765554333 21111 111112345555677778888889999
Q ss_pred HHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccCCCCccccchhhHHHHHHHHHHH
Q 019956 136 QYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNSNSDRVLQTPLQGWIMAIVMALL 215 (333)
Q Consensus 136 ~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~~~~~~~~~~~~G~~l~l~aa~~ 215 (333)
.+.+++|+++++++++.++.|+++++++++++|||+++++|.++++.++|+.+...+ +. +....|+++.++++++
T Consensus 82 ~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~-~~----~~~~~G~~~~l~a~~~ 156 (302)
T TIGR00817 82 SNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDT-EL----SFNWAGFLSAMISNIT 156 (302)
T ss_pred HHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCC-cc----cccHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999875322 11 1235699999999999
Q ss_pred HHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCccc---cch-HHHHHHHHHHHHH-h----
Q 019956 216 SGFAGVYTEAIMKKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVMNKGFFH---GYS-FITVLMILNHALS-G---- 286 (333)
Q Consensus 216 sala~v~~e~~lk~~~~~~~~~~n~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~-~~~~~~i~~~a~g-g---- 286 (333)
+++++++.||..++.+. +....+.+....+.++.++.....+..+.......+ ..+ ...+..++..+++ .
T Consensus 157 ~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (302)
T TIGR00817 157 FVSRNIFSKKAMTIKSL-DKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQ 235 (302)
T ss_pred HHHHHHHHHHhhccCCC-CcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999873221 223333444555665555544333221111100000 001 1122222222221 1
Q ss_pred HHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 287 IAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 287 ~~v~~v~k~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
.+....+|+.++..........+++++++|++++||++|..+++|+
T Consensus 236 ~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~ 281 (302)
T TIGR00817 236 QVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGT 281 (302)
T ss_pred HHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHH
Confidence 2223468899999999999999999999999999999999999986
No 14
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.82 E-value=1e-17 Score=151.93 Aligned_cols=249 Identities=16% Similarity=0.241 Sum_probs=203.1
Q ss_pred Cccc-hHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhhhhhhhHHHHHHHHHHHHHHHHcCChhHHHHH
Q 019956 73 KYEY-SVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVIVYPIPAVLYLVKNLLQYYIFAYVDAPGYQIL 151 (333)
Q Consensus 73 ~~~~-~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ipally~~~n~l~~~al~~l~~~~~~vl 151 (333)
+++| ++.-.+++..+..++++..++. +++... ...+.+..|...++...+...++|.|++|++-++..+.
T Consensus 45 ~~rF~~~~fL~~~q~l~~~~~s~~~l~--~~k~~~-------~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~La 115 (327)
T KOG1581|consen 45 GERFEHSLFLVFCQRLVALLVSYAMLK--WWKKEL-------SGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLA 115 (327)
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHh--cccccC-------CCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHH
Confidence 3444 5666779999999999977763 332211 12344556888899999999999999999999999999
Q ss_pred HhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccCCCCc----cccchhhHHHHHHHHHHHHHHHHHHHHHHh
Q 019956 152 KNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNSNSDR----VLQTPLQGWIMAIVMALLSGFAGVYTEAIM 227 (333)
Q Consensus 152 ~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~~~~~----~~~~~~~G~~l~l~aa~~sala~v~~e~~l 227 (333)
+++|.+.++++..++.|+|++..+.+..++...||.+....+++++ ...+..+|+.++...-+.+|+.+..+++++
T Consensus 116 KscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf 195 (327)
T KOG1581|consen 116 KSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLF 195 (327)
T ss_pred HHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHh
Confidence 9999999999999999999999999999999999999876544332 234677899999999999999999999999
Q ss_pred hcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCccccchHHHHHHHH---HHHHHhHHHHHHhhhhhhHHHHHH
Q 019956 228 KKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVMNKGFFHGYSFITVLMIL---NHALSGIAVSMVMKYADNIVKVYS 304 (333)
Q Consensus 228 k~~~~~~~~~~n~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~---~~a~gg~~v~~v~k~~~~i~k~~~ 304 (333)
|++.. +.+.++..+.+|+.+.+....+.. +.......|...|+...+-+.+ ++++|+.++.+.++..++++-...
T Consensus 196 ~~~k~-s~~~mM~~vNLf~~i~~~~~li~q-g~~~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I 273 (327)
T KOG1581|consen 196 KKYKV-SSLHMMFGVNLFSAILNGTYLILQ-GHLLPAVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTI 273 (327)
T ss_pred ccCCc-cHhHHHHHHHHHHHHHHHHhhhcC-CCCchHHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHH
Confidence 97765 677778888999999998886533 2211222344455665655554 689999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 305 TSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 305 ~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
+..+-++++.+|.+.||++++..+++|.
T Consensus 274 ~ttRk~~si~lS~i~f~h~~s~~q~~g~ 301 (327)
T KOG1581|consen 274 MTTRKMVSIMLSCIVFGHPLSSEQWLGV 301 (327)
T ss_pred HHHHHHHHHHHHHHHhCCccchhhccCe
Confidence 9999999999999999999999999985
No 15
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.81 E-value=4.2e-17 Score=152.61 Aligned_cols=257 Identities=13% Similarity=-0.019 Sum_probs=180.3
Q ss_pred hHHHHHHHHHHHHHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhhhhhh
Q 019956 45 KRKSVVTLALTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVIVYPI 124 (333)
Q Consensus 45 ~~~~~~l~ll~l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i 124 (333)
.+.+..+++.++.++++...+|+. -.+++|...++.|.++..++.+++. .+++. + .++++......
T Consensus 11 ~~~~~~~~la~~~~~~~~~~~K~~----~~~~~~~~~~~~R~~~a~l~l~~~~---~~~~~-----~--~~~~~~~~~~~ 76 (293)
T PRK10532 11 WLPILLLLIAMASIQSGASLAKSL----FPLVGAPGVTALRLALGTLILIAIF---KPWRL-----R--FAKEQRLPLLF 76 (293)
T ss_pred chHHHHHHHHHHHHHhhHHHHHHH----HHHcCHHHHHHHHHHHHHHHHHHHH---hHHhc-----c--CCHHHHHHHHH
Confidence 456778888889999999999987 3458899999999999876665543 22111 1 11233333455
Q ss_pred hHHHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccCCCCccccchhh
Q 019956 125 PAVLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNSNSDRVLQTPLQ 204 (333)
Q Consensus 125 pally~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~~~~~~~~~~~~ 204 (333)
.++++...+.+.|++++|+|++...++..+.|+++++++. ||.+..+ ++.+.++|+.++..++.+. .+....
T Consensus 77 ~g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~~~--~~~i~~~Gv~li~~~~~~~--~~~~~~ 148 (293)
T PRK10532 77 YGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPVDFV--WVVLAVLGLWFLLPLGQDV--SHVDLT 148 (293)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChHHHH--HHHHHHHHHheeeecCCCc--ccCChH
Confidence 6667788899999999999999999999999999998873 5555444 4566789988765332211 122357
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCcccc--chHHHHHHHHHH
Q 019956 205 GWIMAIVMALLSGFAGVYTEAIMKKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVMNKGFFHG--YSFITVLMILNH 282 (333)
Q Consensus 205 G~~l~l~aa~~sala~v~~e~~lk~~~~~~~~~~n~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~i~~~ 282 (333)
|+++.+++++++|++.++.||..++.+. .. ...+ .+.+.+...+.....+.+ . ..+. +....++.++.+
T Consensus 149 G~ll~l~aa~~~a~~~v~~r~~~~~~~~--~~-~~~~-~~~~~~~l~~~~~~~~~~-~----~~~~~~~~~~l~lgv~~t 219 (293)
T PRK10532 149 GAALALGAGACWAIYILSGQRAGAEHGP--AT-VAIG-SLIAALIFVPIGALQAGE-A----LWHWSILPLGLAVAILST 219 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCc--hH-HHHH-HHHHHHHHHHHHHHccCc-c----cCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999998766542 22 2333 233333333322222110 0 0110 111234555566
Q ss_pred HHHhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 283 ALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 283 a~gg~~v~~v~k~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
.++..+....+++.++.......+..|++++++|+++|||+++..+++|+
T Consensus 220 ~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~ 269 (293)
T PRK10532 220 ALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLAL 269 (293)
T ss_pred HHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHH
Confidence 66677777888999999999999999999999999999999999999986
No 16
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.79 E-value=5.6e-17 Score=148.63 Aligned_cols=249 Identities=14% Similarity=0.058 Sum_probs=167.3
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccc-ccch-hhhhhhh
Q 019956 47 KSVVTLALTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLS-TTLD-EVIVYPI 124 (333)
Q Consensus 47 ~~~~l~ll~l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~-~~~~-~~~~~~i 124 (333)
.++..++.++.|+.+.+..|+. .+.+|.+.++.|.++..++.+++.. .++++...+++.+ .+++ ......+
T Consensus 3 g~~~~i~a~~~wg~~~~~~k~~-----~~~~~~~i~~~R~~~a~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (256)
T TIGR00688 3 GIIVSLLASFLFGYMYYYSKLL-----KPLPATDILGHRMIWSFPFMLLSVT--LFRQWAALIERLKRIQKRPLILSLLL 75 (256)
T ss_pred cHHHHHHHHHHHHHHHHHHHHh-----ccCCHHHHHHHHHHHHHHHHHHHHH--HHcchHHHHHHHhCcccchHHHHHHH
Confidence 4456677788999999999974 2378999999999987655444331 1111100001111 1112 2345677
Q ss_pred hHHHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccCCCCccccchhh
Q 019956 125 PAVLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNSNSDRVLQTPLQ 204 (333)
Q Consensus 125 pally~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~~~~~~~~~~~~ 204 (333)
.+++..+++.+.+++++++|+++.+++.++.|+++++++++++|||++++||.++++.++|+.++..+++ + ..
T Consensus 76 ~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~-~----~~-- 148 (256)
T TIGR00688 76 CGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKG-S----LP-- 148 (256)
T ss_pred HHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcC-C----ch--
Confidence 8888889999999999999999999999999999999999999999999999999999999988754321 1 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCccccchHHHHH--HHHHH
Q 019956 205 GWIMAIVMALLSGFAGVYTEAIMKKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVMNKGFFHGYSFITVL--MILNH 282 (333)
Q Consensus 205 G~~l~l~aa~~sala~v~~e~~lk~~~~~~~~~~n~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~i~~~ 282 (333)
.+.++++++++++.++.|+..+++.. ... ...+...++........++....+ ......+.++ ..+..
T Consensus 149 --~~~l~aa~~~a~~~i~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~g~~t 218 (256)
T TIGR00688 149 --WEALVLAFSFTAYGLIRKALKNTDLA-GFC----LETLSLMPVAIYYLLQTDFATVQQ---TNPFPIWLLLVLAGLIT 218 (256)
T ss_pred --HHHHHHHHHHHHHHHHHhhcCCCCcc-hHH----HHHHHHHHHHHHHHHHhccCcccc---cCchhHHHHHHHHHHHH
Confidence 35688999999999999986432211 111 101112222221111112211000 0011112221 11246
Q ss_pred HHHhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 019956 283 ALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFL 319 (333)
Q Consensus 283 a~gg~~v~~v~k~~~~i~k~~~~~~~~v~t~lls~~l 319 (333)
.++..+....+|+.++......++..|+++.++++++
T Consensus 219 ~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 219 GTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 7788888899999999999999999999999999875
No 17
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.77 E-value=3.8e-17 Score=146.42 Aligned_cols=278 Identities=19% Similarity=0.251 Sum_probs=188.9
Q ss_pred HHHHHHHHHHhHHHHHHHHhhc---cC----CccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCc----c--ccc
Q 019956 49 VVTLALTVLTSSQAILIVWSKR---AG----KYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNR----L--STT 115 (333)
Q Consensus 49 ~~l~ll~l~~~~~~ll~~~s~~---~~----~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~----~--~~~ 115 (333)
++-++++.-.+.|.++.||+.+ +| ++++-.+..+|+.|+..+.+-..+- .|.++.+.... + .++
T Consensus 6 ~ls~imvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir---~~sn~~g~~s~~~~ilsq~~~ 82 (372)
T KOG3912|consen 6 FLSLIMVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIR---LRSNGQGVSSDLDSILSQDSS 82 (372)
T ss_pred hhhhhhhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHH---HhhcCCCcccccccccccccC
Confidence 4455666777889999999774 33 3456677788999988554433322 33333221110 0 111
Q ss_pred chhhhhhhhhHHHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccC--
Q 019956 116 LDEVIVYPIPAVLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNS-- 193 (333)
Q Consensus 116 ~~~~~~~~ipally~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~-- 193 (333)
+-+...+..|+++......+.|+|+.+++++.||++....++||++++..+||++++.+||+++....+|++++...+
T Consensus 83 pf~p~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~ 162 (372)
T KOG3912|consen 83 PFNPVLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVH 162 (372)
T ss_pred CCCcceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecc
Confidence 223345666999999999999999999999999999999999999999999999999999999999999999887541
Q ss_pred -CCC--ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHH-HHHHHHh---hhhhh--hh
Q 019956 194 -NSD--RVLQTPLQGWIMAIVMALLSGFAGVYTEAIMKKRPSRNINVQNFWLYVFGMAFN-AVAIVIQ---DFDAV--MN 264 (333)
Q Consensus 194 -~~~--~~~~~~~~G~~l~l~aa~~sala~v~~e~~lk~~~~~~~~~~n~~l~~~~~~~~-~~~~~~~---~~~~~--~~ 264 (333)
.++ +..++...|+++++.+.++-|+.-|+.||.+|+++..+... --+-.+||.++. ++..... .++.. ..
T Consensus 163 ~~~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~a-vg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~ 241 (372)
T KOG3912|consen 163 LVTDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQA-VGWEGLFGLVILSLLAIPMYYIPSGDSFSCNP 241 (372)
T ss_pred cccCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHH-hhhhhhHHHHHHHHHHHHHhheecCCcCcCCC
Confidence 222 12346778999999999999999999999999987633333 334467774433 3322211 11111 11
Q ss_pred cCccccchHHHHH-----HHHHHHHHhHHHHH---------HhhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhc
Q 019956 265 KGFFHGYSFITVL-----MILNHALSGIAVSM---------VMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFL 330 (333)
Q Consensus 265 ~~~~~g~~~~~~~-----~i~~~a~gg~~v~~---------v~k~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~l 330 (333)
.|.++.|.. +|. ..+..+.+|..++. +-|+.++..+.....++..+-.+++..+..|.....++.
T Consensus 242 ~g~~eD~~~-~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqil 320 (372)
T KOG3912|consen 242 RGVLEDWGD-AFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQIL 320 (372)
T ss_pred CcchhhHHH-HHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHH
Confidence 222222211 111 11233444444443 347777777778888888888888888888888888887
Q ss_pred c
Q 019956 331 G 331 (333)
Q Consensus 331 G 331 (333)
|
T Consensus 321 G 321 (372)
T KOG3912|consen 321 G 321 (372)
T ss_pred H
Confidence 7
No 18
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.73 E-value=1.1e-15 Score=142.00 Aligned_cols=204 Identities=14% Similarity=0.100 Sum_probs=140.9
Q ss_pred hhhhHHHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccCCCCccccc
Q 019956 122 YPIPAVLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNSNSDRVLQT 201 (333)
Q Consensus 122 ~~ipally~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~~~~~~~~~ 201 (333)
...-++....++.+.+.++++.|+++...+.++.|+++++++++++|||++++||.|+.+.+.|+.++..++... .
T Consensus 66 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~----~ 141 (281)
T TIGR03340 66 LAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQ----H 141 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccc----c
Confidence 444555678899999999999999999999999999999999999999999999999999999999876432211 2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCC-ch-HHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCccccchHHHHHHH
Q 019956 202 PLQGWIMAIVMALLSGFAGVYTEAIMKKRPSR-NI-NVQNFWLYVFGMAFNAVAIVIQDFDAVMNKGFFHGYSFITVLMI 279 (333)
Q Consensus 202 ~~~G~~l~l~aa~~sala~v~~e~~lk~~~~~-~~-~~~n~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i 279 (333)
...|+.+.++++++++++++..|+..++.++. +. .....+....+.++..... ..+....... ...+-...+...
T Consensus 142 ~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~ 218 (281)
T TIGR03340 142 RRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYL-KRHGRSMFPY--ARQILPSATLGG 218 (281)
T ss_pred chhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHH-HHhccchhhh--HHHHHHHHHHHH
Confidence 23588889999999999999888764433211 11 1111111111122211111 1111100000 000011233344
Q ss_pred HHHHHHhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 280 LNHALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 280 ~~~a~gg~~v~~v~k~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
+..+++..+....+++.++.......+.+|+++.++|++++||+++..+++|.
T Consensus 219 ~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~ 271 (281)
T TIGR03340 219 LMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGV 271 (281)
T ss_pred HHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHH
Confidence 45566666777778888877777778889999999999999999999999985
No 19
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.73 E-value=1.6e-14 Score=133.14 Aligned_cols=267 Identities=15% Similarity=0.153 Sum_probs=177.5
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhhhhhhhH
Q 019956 47 KSVVTLALTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVIVYPIPA 126 (333)
Q Consensus 47 ~~~~l~ll~l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ipa 126 (333)
.....++..+.|+......|....+ +.++....+.+......+.+... .++.. ...+.. .+........+
T Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~--~~~~~~~~~~~ 77 (292)
T COG0697 8 GLLALLLWGLLWGLSFIALKLAVES---LDPFLFAAALRFLIAALLLLPLL---LLEPR--GLRPAL--RPWLLLLLLAL 77 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc---cCChHHHHHHHHHHHHHHHHHHH---Hhhcc--cccccc--cchHHHHHHHH
Confidence 4455556668888888887775333 34555656667777666622222 12111 011111 11123355556
Q ss_pred HHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHH-HHhcCccCHHHHHHHHHHHhhhhcccccCCCCccccchhhH
Q 019956 127 VLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYR-IILKKKLSEIQWAAFILLCCGCTTAQLNSNSDRVLQTPLQG 205 (333)
Q Consensus 127 lly~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~-l~Lkekls~~qw~al~ll~~Gv~~v~~~~~~~~~~~~~~~G 205 (333)
+.....+.+.+.++++++++...++.++.|+++++++. +++|||+++++|.++++.++|+.++..++..+... +..|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~--~~~g 155 (292)
T COG0697 78 LGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGIL--SLLG 155 (292)
T ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhH--HHHH
Confidence 66788999999999999999999999999999999997 77799999999999999999999998764433111 5689
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCccccchHHHHHHHHHHHHH
Q 019956 206 WIMAIVMALLSGFAGVYTEAIMKKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVMNKGFFHGYSFITVLMILNHALS 285 (333)
Q Consensus 206 ~~l~l~aa~~sala~v~~e~~lk~~~~~~~~~~n~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~a~g 285 (333)
+.+.++++++++++.++.|+.. +.+. ....-.+... +...........+.. .......+....+..++..+++
T Consensus 156 ~~~~l~a~~~~a~~~~~~~~~~-~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~i~ 228 (292)
T COG0697 156 LLLALAAALLWALYTALVKRLS-RLGP--VTLALLLQLL-LALLLLLLFFLSGFG---APILSRAWLLLLYLGVFSTGLA 228 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-CCCh--HHHHHHHHHH-HHHHHHHHHHhcccc---ccCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999987 3221 1111101111 111111111111110 0000111222333444445567
Q ss_pred hHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 286 GIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 286 g~~v~~v~k~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
..+....+++.++..........++++.+++++++||+++..+++|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~ 275 (292)
T COG0697 229 YLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGA 275 (292)
T ss_pred HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHH
Confidence 77777888888888888888999999999999999999999999985
No 20
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.71 E-value=5e-17 Score=142.39 Aligned_cols=212 Identities=15% Similarity=0.173 Sum_probs=170.9
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccCCC--C
Q 019956 119 VIVYPIPAVLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNSNS--D 196 (333)
Q Consensus 119 ~~~~~ipally~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~~~--~ 196 (333)
...|+..++.|.+.+.-...|++|+|.++..+-.++||+.+.++.+++.+++++++++.++++..+||++....++. +
T Consensus 85 ~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g 164 (337)
T KOG1580|consen 85 TKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGG 164 (337)
T ss_pred chHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCC
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999887432 2
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCccccchHHHH
Q 019956 197 RVLQTPLQGWIMAIVMALLSGFAGVYTEAIMKKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVMNKGFFHGYSFITV 276 (333)
Q Consensus 197 ~~~~~~~~G~~l~l~aa~~sala~v~~e~~lk~~~~~~~~~~n~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 276 (333)
..+.....|.++.+++-...|+.++.+|++-+.+..++ .-.+..+.+|+.+....+++ ..++..+-..|-+.|+...|
T Consensus 165 ~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g-~~MM~~~NlwStL~Lg~g~l-fTGElweF~yF~~RhP~~~~ 242 (337)
T KOG1580|consen 165 AEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTG-TSMMFYTNLWSTLYLGAGLL-FTGELWEFFYFVQRHPYVFW 242 (337)
T ss_pred CcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCc-hhhHHHHHHHHHHHhhhhhe-ehhhHHHHHHHHHhccHHHH
Confidence 22346678999999999999999999999977755432 22335667788877666554 22221111112234444333
Q ss_pred ---HHHHHHHHHhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 277 ---LMILNHALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 277 ---~~i~~~a~gg~~v~~v~k~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
+..+..++|++++...+.+.+.......++..-.+|++.|+++|+++++..+|+|+
T Consensus 243 ~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgt 301 (337)
T KOG1580|consen 243 DLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGT 301 (337)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHH
Confidence 23347889999999999999999999999999999999999999999999999986
No 21
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.45 E-value=1.1e-10 Score=109.07 Aligned_cols=259 Identities=11% Similarity=0.102 Sum_probs=166.8
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhhhhhhhHH
Q 019956 48 SVVTLALTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVIVYPIPAV 127 (333)
Q Consensus 48 ~~~l~ll~l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ipal 127 (333)
+++.++-++.|++.++..|..+ ..++...+ +..+...+....... .+ +. + ...++....-.+.++
T Consensus 3 ~l~~lia~~~wGs~g~~~k~~~-----g~~~~~~~--~~~~g~l~~~~~~~~-~~-~~---~---~~~~~~~~~g~l~G~ 67 (290)
T TIGR00776 3 ILIALIPALFWGSFVLINVKIG-----GGPYSQTL--GTTFGALILSIAIAI-FV-LP---E---FWALSIFLVGLLSGA 67 (290)
T ss_pred hHHHHHHHHHHhhhHHHHhccC-----CCHHHHHH--HHHHHHHHHHHHHHH-Hh-CC---c---ccccHHHHHHHHHHH
Confidence 3455566889999999988764 22333333 332222222222110 22 11 1 111233333445566
Q ss_pred HHHHHHHHHHHHHHcCChhHHHHHHh-hHHHHHHHHHHHHhcCccCHHH----HHHHHHHHhhhhcccccCCCCcc-c--
Q 019956 128 LYLVKNLLQYYIFAYVDAPGYQILKN-LNIISTGVLYRIILKKKLSEIQ----WAAFILLCCGCTTAQLNSNSDRV-L-- 199 (333)
Q Consensus 128 ly~~~n~l~~~al~~l~~~~~~vl~~-~k~l~talls~l~Lkekls~~q----w~al~ll~~Gv~~v~~~~~~~~~-~-- 199 (333)
+..+.|.+++.+.++++.++...+.+ +.++..++++.+++|||.++++ +.|+++.++|+.++...++++.. .
T Consensus 68 ~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~ 147 (290)
T TIGR00776 68 FWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSE 147 (290)
T ss_pred HHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccc
Confidence 68899999999999999999999999 9999999999999999999999 99999999999988654322111 0
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCccccchHH--HHH
Q 019956 200 QTPLQGWIMAIVMALLSGFAGVYTEAIMKKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVMNKGFFHGYSFI--TVL 277 (333)
Q Consensus 200 ~~~~~G~~l~l~aa~~sala~v~~e~~lk~~~~~~~~~~n~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~ 277 (333)
.+...|+++.++++++.+++.+..|+. +..+.+..+.+..-+.+.+.+++.+.. +.+ + +...+.+ ...
T Consensus 148 ~~~~~Gi~~~l~sg~~y~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~-~-----~~~~~~~~~~~~ 217 (290)
T TIGR00776 148 FNFKKGILLLLMSTIGYLVYVVVAKAF-GVDGLSVLLPQAIGMVIGGIIFNLGHI---LAK-P-----LKKYAILLNILP 217 (290)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHc-CCCcceehhHHHHHHHHHHHHHHHHHh---ccc-c-----hHHHHHHHHHHH
Confidence 233569999999999999999999976 222211122233333445554444320 000 0 0010111 112
Q ss_pred HHHHHHHHhHHHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhh----ccc
Q 019956 278 MILNHALSGIAVSMVMK-YADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFF----LGS 332 (333)
Q Consensus 278 ~i~~~a~gg~~v~~v~k-~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~----lG~ 332 (333)
.++ ..++..+.....+ +.+...-...++..|+.+++.+++++||+.+..++ +|.
T Consensus 218 Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~ 276 (290)
T TIGR00776 218 GLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGI 276 (290)
T ss_pred HHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHH
Confidence 222 3445444444456 77777777778899999999999999999999988 774
No 22
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.37 E-value=5.9e-13 Score=119.03 Aligned_cols=203 Identities=12% Similarity=0.140 Sum_probs=146.9
Q ss_pred hhhhHHHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccCC----C--
Q 019956 122 YPIPAVLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNSN----S-- 195 (333)
Q Consensus 122 ~~ipally~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~~----~-- 195 (333)
+.++++.-+....+.|++++|++.+.+.++..+.|.+|.++++.+|||++|+..-++..+.+.||.++..++. .
T Consensus 100 LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~ 179 (346)
T KOG4510|consen 100 LILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTE 179 (346)
T ss_pred EEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCcc
Confidence 4556777778889999999999999999999999999999999999999999999999999999999987741 1
Q ss_pred --Cccc-cchhhHHHHHHHHHHHHHHHHHHHHHHhhcCCC-CchHHHHHHHHHHHHHHHHHHHH-HhhhhhhhhcCcccc
Q 019956 196 --DRVL-QTPLQGWIMAIVMALLSGFAGVYTEAIMKKRPS-RNINVQNFWLYVFGMAFNAVAIV-IQDFDAVMNKGFFHG 270 (333)
Q Consensus 196 --~~~~-~~~~~G~~l~l~aa~~sala~v~~e~~lk~~~~-~~~~~~n~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~g 270 (333)
+... ....+|.+..+.+++..+-.-+..|++-|+.+. -+++ +....+.+..++... ..+++.+.. |
T Consensus 180 g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h~~msvs----yf~~i~lV~s~I~~~~ig~~~lP~c-----g 250 (346)
T KOG4510|consen 180 GEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNAHAIMSVS----YFSLITLVVSLIGCASIGAVQLPHC-----G 250 (346)
T ss_pred ccccccccccCCchHHHHHhHhhhhhHHHHHHHhhccccEEEEeh----HHHHHHHHHHHHHHhhccceecCcc-----c
Confidence 1111 245678888888888877777888888777442 1233 222333333333322 122222210 1
Q ss_pred chHHHH-HHHHHHHHHhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhcccC
Q 019956 271 YSFITV-LMILNHALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGSM 333 (333)
Q Consensus 271 ~~~~~~-~~i~~~a~gg~~v~~v~k~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~lG~~ 333 (333)
.+++.. ..-+..-+|++++.+-+....+--....++..++++.+..+++|||.||+..++|++
T Consensus 251 kdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~ 314 (346)
T KOG4510|consen 251 KDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAV 314 (346)
T ss_pred cceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhcee
Confidence 111111 122356778888888887666666678889999999999999999999999999974
No 23
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.35 E-value=7.4e-10 Score=100.89 Aligned_cols=258 Identities=16% Similarity=0.177 Sum_probs=167.8
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhhhhhhh
Q 019956 46 RKSVVTLALTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVIVYPIP 125 (333)
Q Consensus 46 ~~~~~l~ll~l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ip 125 (333)
++.++.+..-++|+..|.-.|+- ++.++..+.-=|-+-...+.+.++.. .|+.+ +.....+++|....+.+.
T Consensus 7 ~Gil~~l~Ay~lwG~lp~y~kll-----~~~~~~eIlahRviwS~~~~l~ll~~-~r~~~--~~~~~~~~p~~~~~~~l~ 78 (293)
T COG2962 7 KGILLALLAYLLWGLLPLYFKLL-----EPLPATEILAHRVIWSFPFMLALLFL-LRQWR--ELKQLLKQPKTLLMLALT 78 (293)
T ss_pred chhHHHHHHHHHHHHHHHHHHHH-----ccCCHHHHHHHHHHHHHHHHHHHHHH-HhhhH--HHHHHHhCcHHHHHHHHH
Confidence 45666667778899999999986 34455555544444444333333321 11111 112234567788888899
Q ss_pred HHHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccCCCCccccchhhH
Q 019956 126 AVLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNSNSDRVLQTPLQG 205 (333)
Q Consensus 126 ally~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~~~~~~~~~~~~G 205 (333)
+++-..|-.++-+|..+=..-..++=+..+|++..+++.+++|||+|+.||+|+++..+||..-....++ -+.
T Consensus 79 a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~-----lpw-- 151 (293)
T COG2962 79 ALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGS-----LPW-- 151 (293)
T ss_pred HHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCC-----CcH--
Confidence 9988889999999999988889999999999999999999999999999999999999999976543221 122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHH-HhhhhhhhhcCccc-cchHHHHHHHHHHH
Q 019956 206 WIMAIVMALLSGFAGVYTEAIMKKRPSRNINVQNFWLYVFGMAFNAVAIV-IQDFDAVMNKGFFH-GYSFITVLMILNHA 283 (333)
Q Consensus 206 ~~l~l~aa~~sala~v~~e~~lk~~~~~~~~~~n~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~-g~~~~~~~~i~~~a 283 (333)
..+.-|+.+++|+..-|+ +|-.+.++....++.+. +..+...+ ..|..+ +.. +.+...++.+....
T Consensus 152 --val~la~sf~~Ygl~RK~-~~v~a~~g~~lE~l~l~----p~al~yl~~l~~~~~-----~~~~~~~~~~~LLv~aG~ 219 (293)
T COG2962 152 --VALALALSFGLYGLLRKK-LKVDALTGLTLETLLLL----PVALIYLLFLADSGQ-----FLQQNANSLWLLLVLAGL 219 (293)
T ss_pred --HHHHHHHHHHHHHHHHHh-cCCchHHhHHHHHHHHh----HHHHHHHHHHhcCch-----hhhcCCchHHHHHHHhhH
Confidence 234557888999976444 34433324444333332 22222222 222221 111 22233333333333
Q ss_pred HHh---HHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhc
Q 019956 284 LSG---IAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFL 330 (333)
Q Consensus 284 ~gg---~~v~~v~k~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~l 330 (333)
+.. ++.+..-|...=...++.++.+|.+--++++++|||+++..+.+
T Consensus 220 vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~ 269 (293)
T COG2962 220 VTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLV 269 (293)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHH
Confidence 333 23333346666677889999999999999999999999987764
No 24
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.30 E-value=9.3e-11 Score=106.93 Aligned_cols=275 Identities=17% Similarity=0.186 Sum_probs=182.0
Q ss_pred HHHHHHHHHHhHHHHHHHHhhccCCccch-HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhh-hhhhhH
Q 019956 49 VVTLALTVLTSSQAILIVWSKRAGKYEYS-VTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVI-VYPIPA 126 (333)
Q Consensus 49 ~~l~ll~l~~~~~~ll~~~s~~~~~~~~~-~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~ipa 126 (333)
++.+.+++.|-.-.+..+++.++-++.|+ |.-++-+..++|+.++..... .+++.. ++.|...+|++.+ +.+..|
T Consensus 15 V~~L~lVl~yY~~Si~Ltf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~--l~~~~~-~r~r~~~sw~~~Lr~~aPta 91 (349)
T KOG1443|consen 15 VLTLALVLLYYFLSIGLTFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRR--LYQCSV-PRARVVLSWRDYLRRLAPTA 91 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHH--HHhccC-CccccCCcHHHHHHHhhhhh
Confidence 44555667888877777887765444443 666677888889888766543 222222 2334556787554 566667
Q ss_pred HHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccCCCCccccchhhHH
Q 019956 127 VLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNSNSDRVLQTPLQGW 206 (333)
Q Consensus 127 lly~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~~~~~~~~~~~~G~ 206 (333)
+.-+.+-.+..++++|++.+.|.+.+++.++|+-+|+.++-=||.++.=...+++...|+.+...++.. -...|.
T Consensus 92 lata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTq-----f~i~Gf 166 (349)
T KOG1443|consen 92 LATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQ-----FNIEGF 166 (349)
T ss_pred hhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccc-----eeehhH
Confidence 767789999999999999999999999999999999999888999999999999999999988876432 346799
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCC--CchHHHHHHHHHHHHHHHHHHHHHhhhhhhh-hcCccccchH-HHHHHHHHH
Q 019956 207 IMAIVMALLSGFAGVYTEAIMKKRPS--RNINVQNFWLYVFGMAFNAVAIVIQDFDAVM-NKGFFHGYSF-ITVLMILNH 282 (333)
Q Consensus 207 ~l~l~aa~~sala~v~~e~~lk~~~~--~~~~~~n~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~-~~~~~i~~~ 282 (333)
.+++++++++|+.-.+.++++++.+. +++.....++.-+-.+..++..+..|+.... ....|+.+++ ..+.++-.-
T Consensus 167 ~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i 246 (349)
T KOG1443|consen 167 FLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLI 246 (349)
T ss_pred HHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHH
Confidence 99999999999999999999998651 1222222222222222223333333432111 1112222222 233444445
Q ss_pred HHHhHHHHHHhhhhh--------hHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 283 ALSGIAVSMVMKYAD--------NIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 283 a~gg~~v~~v~k~~~--------~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
+.||. .++.+-..+ .+..+.+-.+--+.+.+++....+++++..-++|.
T Consensus 247 ~l~g~-laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl 303 (349)
T KOG1443|consen 247 SLGGL-LAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGL 303 (349)
T ss_pred HHHHH-HHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHH
Confidence 55554 334443333 33333333344478899999999999998888773
No 25
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.09 E-value=3.4e-08 Score=91.26 Aligned_cols=263 Identities=16% Similarity=0.218 Sum_probs=164.5
Q ss_pred HHHHHHHHHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhhhhhhhHHHH
Q 019956 50 VTLALTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVIVYPIPAVLY 129 (333)
Q Consensus 50 ~l~ll~l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ipally 129 (333)
.-+..++-...-.++-|+.- ..++|+..-.+.+-.-+..++.+.++ ++-|.-+.+ .-+|+...+...++++|
T Consensus 16 sa~~Y~~sS~lm~vvNK~vl--s~y~f~~~l~l~~~Q~l~s~~~v~~l----k~~~lv~~~--~l~~~~~kk~~P~~~lf 87 (314)
T KOG1444|consen 16 SALFYCLSSILMTVVNKIVL--SSYNFPMGLLLMLLQSLASVLVVLVL----KRLGLVNFR--PLDLRTAKKWFPVSLLF 87 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHH--hcCCCcHHHHHHHHHHHHHHHHHHHH----HHhceeecC--CcChHHHHHHccHHHHH
Confidence 33344444444555555532 25777766655444444444444444 333321222 23467777788888889
Q ss_pred HHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccCCCCccccchhhHHHHH
Q 019956 130 LVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNSNSDRVLQTPLQGWIMA 209 (333)
Q Consensus 130 ~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~~~~~~~~~~~~G~~l~ 209 (333)
.+.-...-.+++|++.+++.++++..|+.||+.-..++|.|.+..-|.++.+..+|......+..+ ....|+.++
T Consensus 88 ~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~s-----f~~~gY~w~ 162 (314)
T KOG1444|consen 88 VGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLS-----FNLRGYSWA 162 (314)
T ss_pred HHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccce-----ecchhHHHH
Confidence 888888889999999999999999999999999999999999999999999999998766544222 123489999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCC---chHHHHHHHHHHHHHHHHHHH-HHhhhhhhhhcCccccc-hHHHHHHHHHHHH
Q 019956 210 IVMALLSGFAGVYTEAIMKKRPSR---NINVQNFWLYVFGMAFNAVAI-VIQDFDAVMNKGFFHGY-SFITVLMILNHAL 284 (333)
Q Consensus 210 l~aa~~sala~v~~e~~lk~~~~~---~~~~~n~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~-~~~~~~~i~~~a~ 284 (333)
+..++..+...++.|+..+..+.. -.+..| +.+.+...... +..|+++...+ +..+ ....|..+....+
T Consensus 163 ~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNn----l~~L~~l~~~~~~~ge~~~l~~~--~~~~~~~~~~~~~~lScv 236 (314)
T KOG1444|consen 163 LANCLTTAAFVVYVKKSVDSANLNKFGLVFYNN----LLSLPPLLILSFITGELDALSLN--FDNWSDSSVLVVMLLSCV 236 (314)
T ss_pred HHHHHHHHHHHHHHHHhhccccccceeEEeehh----HHHHHHHHHHHHHhcchHHHHhh--cccccchhHHHHHHHHHH
Confidence 999999999999999988764321 123332 33444433322 34455522211 1112 2445666666777
Q ss_pred HhHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhcc
Q 019956 285 SGIAVSMVMKYA----DNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLG 331 (333)
Q Consensus 285 gg~~v~~v~k~~----~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~lG 331 (333)
.|..+++..... ++..-..........+.+...+++|++.++.-++|
T Consensus 237 ~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~g 287 (314)
T KOG1444|consen 237 MGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIG 287 (314)
T ss_pred HHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHH
Confidence 776666655321 11111111112234555555666688888776655
No 26
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.06 E-value=5.6e-09 Score=93.95 Aligned_cols=207 Identities=19% Similarity=0.181 Sum_probs=151.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccCCCCccccc
Q 019956 122 YPIPAVLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNSNSDRVLQT 201 (333)
Q Consensus 122 ~~ipally~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~~~~~~~~~ 201 (333)
|.+.+.+-.....+..-++.|++-++..+.+.+|.+.+.+.+.++=|+|+......+-.+..+|.++..+.++..+ .+-
T Consensus 109 Y~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~s-PNF 187 (367)
T KOG1582|consen 109 YVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTS-PNF 187 (367)
T ss_pred hhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccC-CCc
Confidence 7777887788899999999999999999999999999999999999999999999999999999999887643221 122
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCccccchHHHHHHHHH
Q 019956 202 PLQGWIMAIVMALLSGFAGVYTEAIMKKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVMNKGFFHGYSFITVLMILN 281 (333)
Q Consensus 202 ~~~G~~l~l~aa~~sala~v~~e~~lk~~~~~~~~~~n~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~ 281 (333)
...|+.++-+|-++.|+-+-.+||.+|.++.++ ...-++-+..|.++.++.+... ++-.+...|...++.-++...+.
T Consensus 188 ~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss-~EmvfySy~iG~vflf~~mvlT-ge~f~a~~fcaehp~~tyGy~~~ 265 (367)
T KOG1582|consen 188 NLIGVMMISGALLADAVIGNVQEKAMKMNPASS-SEMVFYSYGIGFVFLFAPMVLT-GELFSAWTFCAEHPVRTYGYAFL 265 (367)
T ss_pred ceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCc-ceEEEeeecccHHHHHHHHHhc-ccchhhhHHHHhCcHhHHHHHHH
Confidence 357999999999999999999999999876533 2111233445555555554322 22111111222333334443332
Q ss_pred H----HHHhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhcc
Q 019956 282 H----ALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLG 331 (333)
Q Consensus 282 ~----a~gg~~v~~v~k~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~lG 331 (333)
- -+|...+--.+|..++......++.+--+|+++|.++|..|+|....-|
T Consensus 266 ~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~ 319 (367)
T KOG1582|consen 266 FSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWS 319 (367)
T ss_pred HHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhh
Confidence 2 2233334344588888888888999999999999999999999876544
No 27
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.05 E-value=5.8e-09 Score=97.75 Aligned_cols=202 Identities=21% Similarity=0.269 Sum_probs=137.8
Q ss_pred hHHHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccCCC---Cccccc
Q 019956 125 PAVLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNSNS---DRVLQT 201 (333)
Q Consensus 125 pally~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~~~---~~~~~~ 201 (333)
-+.+.++.|...+.||.+.+.+...+++++.=+||-.++.++.+||+|..+.+++++.+.||+++..+++. +....+
T Consensus 165 fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~ 244 (416)
T KOG2765|consen 165 FCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASR 244 (416)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccc
Confidence 45557899999999999999999999999999999999999999999999999999999999999876432 223456
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHH---HHHHHHHHhhhhhhhhcCccccch-HHHHH
Q 019956 202 PLQGWIMAIVMALLSGFAGVYTEAIMKKRPSRNINVQNFWLYVFGMA---FNAVAIVIQDFDAVMNKGFFHGYS-FITVL 277 (333)
Q Consensus 202 ~~~G~~l~l~aa~~sala~v~~e~~lk~~~~~~~~~~n~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~ 277 (333)
+..|.++.+++|+..|+|.+..+|-..+++. -+-++ ......|+. +..+..+..|.-.... |+--+ .....
T Consensus 245 ~llG~llaL~sA~~YavY~vllk~~~~~eg~-rvdi~-lffGfvGLfnllllwP~l~iL~~~~~e~---F~lP~~~q~~~ 319 (416)
T KOG2765|consen 245 PLLGNLLALLSALLYAVYTVLLKRKIGDEGE-RVDIQ-LFFGFVGLFNLLLLWPPLIILDFFGEER---FELPSSTQFSL 319 (416)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcccccc-cccHH-HHHHHHHHHHHHHHhHHHHHHHHhccCc---ccCCCCceeEe
Confidence 7899999999999999999998876555531 12222 122222322 2222222222110000 11101 11122
Q ss_pred HHHHHHHHhHHHHHHh-----hhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 278 MILNHALSGIAVSMVM-----KYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 278 ~i~~~a~gg~~v~~v~-----k~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
+++.+ +-|.+++=.+ -..++.+...+.+++++++++...++=|.++|+.+++|+
T Consensus 320 vv~~~-ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGs 378 (416)
T KOG2765|consen 320 VVFNN-LIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGS 378 (416)
T ss_pred eeHhh-HHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHH
Confidence 22333 3333333222 234555555566677899999999999999999999996
No 28
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.03 E-value=1.3e-09 Score=102.04 Aligned_cols=206 Identities=17% Similarity=0.251 Sum_probs=141.3
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccCCCCcc
Q 019956 119 VIVYPIPAVLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNSNSDRV 198 (333)
Q Consensus 119 ~~~~~ipally~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~~~~~~ 198 (333)
+....-.|+.+++...+.+.+++++|.+.+|.++.+.|++|.++++++.+|+.++.-|++++....||.+....+.+
T Consensus 83 ~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~--- 159 (316)
T KOG1441|consen 83 LRTLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELS--- 159 (316)
T ss_pred hHHHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeecccc---
Confidence 33456678888999999999999999999999999999999999999999999999999999999999988764221
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHH--HHHHHHHHH-HHHHHhhhhhhhhcC-ccccchHH
Q 019956 199 LQTPLQGWIMAIVMALLSGFAGVYTEAIMKKRPSRNINVQNFWL--YVFGMAFNA-VAIVIQDFDAVMNKG-FFHGYSFI 274 (333)
Q Consensus 199 ~~~~~~G~~l~l~aa~~sala~v~~e~~lk~~~~~~~~~~n~~l--~~~~~~~~~-~~~~~~~~~~~~~~~-~~~g~~~~ 274 (333)
-...|.+..+++.+..++.+++.|+++++++. +..-.|... +-.+.++.+ +.....+++.. . + ....++..
T Consensus 160 --fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~-~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~-~~~~~~~~~~ 234 (316)
T KOG1441|consen 160 --FNLFGFISAMISNLAFALRNILSKKLLTSKGE-SLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-V-GFLTAPWFVT 234 (316)
T ss_pred --ccHHHHHHHHHHHHHHHHHHHHHHHhhhcccc-ccCchHHHHHhhhHHHHHHhcchHhhhcccce-e-eeeccccchh
Confidence 34689999999999999999999999964322 222122222 223333333 22222222211 0 1 11133332
Q ss_pred HHHHHHHH---HHHhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 275 TVLMILNH---ALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 275 ~~~~i~~~---a~gg~~v~~v~k~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
.+..++.+ -.-.+....++.+.+++.-..+..+--++.++.|+++|++++|+...+|.
T Consensus 235 ~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~ 295 (316)
T KOG1441|consen 235 FLILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGY 295 (316)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHH
Confidence 22222222 11223444556666666555555555577788899999999999998885
No 29
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.00 E-value=2.1e-10 Score=103.20 Aligned_cols=207 Identities=16% Similarity=0.274 Sum_probs=140.7
Q ss_pred hhhhhHHHHHHHHHHHHHHHHc-CChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccCCCC---
Q 019956 121 VYPIPAVLYLVKNLLQYYIFAY-VDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNSNSD--- 196 (333)
Q Consensus 121 ~~~ipally~~~n~l~~~al~~-l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~~~~--- 196 (333)
.|++.-..+++.|....+++++ +|.+...+.++..++.+.+++++++|||+|.+|..++++.++|+.+.....+.|
T Consensus 66 ~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~ 145 (330)
T KOG1583|consen 66 DYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRS 145 (330)
T ss_pred hhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhh
Confidence 4777777788999999999985 999999999999999999999999999999999999999999999876532211
Q ss_pred ------cc-----ccchhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHH-HHHHHHHHHHHHHH--HHhhhhhh
Q 019956 197 ------RV-----LQTPLQGWIMAIVMALLSGFAGVYTEAIMKKRPSRNINVQNF-WLYVFGMAFNAVAI--VIQDFDAV 262 (333)
Q Consensus 197 ------~~-----~~~~~~G~~l~l~aa~~sala~v~~e~~lk~~~~~~~~~~n~-~l~~~~~~~~~~~~--~~~~~~~~ 262 (333)
+. ......|+.+...+.+.+|..++|+|..+|++.++ |-.++ +.-+.+.++.+... ....|...
T Consensus 146 ~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh--~~EalFytH~LsLP~Flf~~~div~~~~~~ 223 (330)
T KOG1583|consen 146 KLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKH--WKEALFYTHFLSLPLFLFMGDDIVSHWRLA 223 (330)
T ss_pred hhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--hHHHHHHHHHhccchHHHhcchHHHHHHHH
Confidence 00 11234699999999999999999999999997752 22222 22233333332211 01112111
Q ss_pred h--------hcCccccchHHHHHHHHHHHHH-hHHHHHHhhh---hhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhc
Q 019956 263 M--------NKGFFHGYSFITVLMILNHALS-GIAVSMVMKY---ADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFL 330 (333)
Q Consensus 263 ~--------~~~~~~g~~~~~~~~i~~~a~g-g~~v~~v~k~---~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~l 330 (333)
. ..|+. -+..|.-++.+.+. ..++..|.-. .++........++..++.++|+.+|..++|+..++
T Consensus 224 ~~se~~~~p~~g~~---vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~l 300 (330)
T KOG1583|consen 224 FKSESYLIPLLGFK---VPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWL 300 (330)
T ss_pred hcCcceeccccCcc---ccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHH
Confidence 1 11211 23344444444443 3455444421 12222333344566899999999999999999999
Q ss_pred cc
Q 019956 331 GS 332 (333)
Q Consensus 331 G~ 332 (333)
|+
T Consensus 301 Ga 302 (330)
T KOG1583|consen 301 GA 302 (330)
T ss_pred HH
Confidence 96
No 30
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=98.97 E-value=5.7e-07 Score=80.47 Aligned_cols=249 Identities=15% Similarity=0.075 Sum_probs=148.0
Q ss_pred HHHHHHHHHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhhhhhhhHHHH
Q 019956 50 VTLALTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVIVYPIPAVLY 129 (333)
Q Consensus 50 ~l~ll~l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ipally 129 (333)
+++..+-.+.+..+....- +..-+.-..-+|-.+.-++.+.+. |-||++ ..+.+|+....| ++.-
T Consensus 17 ll~amvsiq~Gas~Ak~LF-----P~vG~~g~t~lRl~~aaLIll~l~-RPwr~r------~~~~~~~~~~~y---GvsL 81 (292)
T COG5006 17 LLVAMVSIQSGASFAKSLF-----PLVGAAGVTALRLAIAALILLALF-RPWRRR------LSKPQRLALLAY---GVSL 81 (292)
T ss_pred HHHHHHHHHhhHHHHHHHc-----cccChhhHHHHHHHHHHHHHHHHh-hHHHhc------cChhhhHHHHHH---HHHH
Confidence 4555666677776654432 333455556666666555444443 112211 112334444444 4555
Q ss_pred HHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccCCCCccccchhhHHHHH
Q 019956 130 LVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNSNSDRVLQTPLQGWIMA 209 (333)
Q Consensus 130 ~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~~~~~~~~~~~~G~~l~ 209 (333)
...|.++|.+++.+|-++...+-++-|+.+++++ .||..-.-|+++.++-++.+....+ + ..+....|..+.
T Consensus 82 g~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~----sRr~~d~vwvaLAvlGi~lL~p~~~--~--~~~lDp~Gv~~A 153 (292)
T COG5006 82 GGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLS----SRRLRDFVWVALAVLGIWLLLPLGQ--S--VWSLDPVGVALA 153 (292)
T ss_pred HHHHHHHHHHHHhccchhhhhhhhccHHHHHHHh----ccchhhHHHHHHHHHHHHhheeccC--C--cCcCCHHHHHHH
Confidence 7899999999999999999999999999998865 5666666677776655555444322 1 112456899999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCccccchHHHHH-----HHHHHHH
Q 019956 210 IVMALLSGFAGVYTEAIMKKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVMNKGFFHGYSFITVL-----MILNHAL 284 (333)
Q Consensus 210 l~aa~~sala~v~~e~~lk~~~~~~~~~~n~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-----~i~~~a~ 284 (333)
+++..+|+.|-+..+|.-+..+- .--...-+. .+.++.++.-..+.+.. ++ ++.... .++..++
T Consensus 154 l~AG~~Wa~YIv~G~r~g~~~~g--~~g~a~gm~-vAaviv~Pig~~~ag~~-----l~---~p~ll~laLgvavlSSal 222 (292)
T COG5006 154 LGAGACWALYIVLGQRAGRAEHG--TAGVAVGML-VAALIVLPIGAAQAGPA-----LF---SPSLLPLALGVAVLSSAL 222 (292)
T ss_pred HHHhHHHHHHHHHcchhcccCCC--chHHHHHHH-HHHHHHhhhhhhhcchh-----hc---ChHHHHHHHHHHHHhccc
Confidence 99999999999999999764332 111111111 11111111111111111 11 222111 2222333
Q ss_pred HhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 285 SGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 285 gg~~v~~v~k~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
-..+=-..++..+...-....+..|.++++.|++++||++|..+|+|.
T Consensus 223 PYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI 270 (292)
T COG5006 223 PYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAI 270 (292)
T ss_pred chHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 333333455666655555556677899999999999999999999875
No 31
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.95 E-value=8.4e-09 Score=82.92 Aligned_cols=123 Identities=16% Similarity=0.087 Sum_probs=94.1
Q ss_pred HHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhhhhhhhHHH-HHHHHHH
Q 019956 57 LTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVIVYPIPAVL-YLVKNLL 135 (333)
Q Consensus 57 ~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ipall-y~~~n~l 135 (333)
.|+...+..|.. .++++|...++.+.+...+ .+++.. ..+++. ....++++.....+.+++ ..+.+.+
T Consensus 2 ~~a~~~~~~k~~----~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (126)
T PF00892_consen 2 SWAIYSVFSKKL----LKKISPLSITFWRFLIAGI-LLILLL--ILGRKP----FKNLSPRQWLWLLFLGLLGTALAYLL 70 (126)
T ss_pred eeeeHHHHHHHH----hccCCHHHHHHHHHHHHHH-HHHHHH--hhcccc----ccCCChhhhhhhhHhhccceehHHHH
Confidence 466777777765 2347899999999998875 333332 111111 111234455556667776 4789999
Q ss_pred HHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhccc
Q 019956 136 QYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQ 190 (333)
Q Consensus 136 ~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~ 190 (333)
.+.+++++|++..+++.++.|+++++++++++||+++++||.|+++.+.|+.++.
T Consensus 71 ~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 71 YFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998753
No 32
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.88 E-value=3.4e-08 Score=79.36 Aligned_cols=132 Identities=13% Similarity=0.089 Sum_probs=103.8
Q ss_pred HHHHHHHHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhhhhhhhHHHHH
Q 019956 51 TLALTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVIVYPIPAVLYL 130 (333)
Q Consensus 51 l~ll~l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ipally~ 130 (333)
-++..++++..++..|.- -+..+|....++|.++...++..+.+. .++. . ..-..+.|...-..+.|+.-.
T Consensus 8 ALLsA~fa~L~~iF~KIG----l~~vdp~~At~IRtiVi~~~l~~v~~~---~g~~-~-~~~~~~~k~~lflilSGla~g 78 (140)
T COG2510 8 ALLSALFAGLTPIFAKIG----LEGVDPDFATTIRTIVILIFLLIVLLV---TGNW-Q-AGGEIGPKSWLFLILSGLAGG 78 (140)
T ss_pred HHHHHHHHHHHHHHHHHh----ccccCccHHHHHHHHHHHHHHHHHHHh---cCce-e-cccccCcceehhhhHHHHHHH
Confidence 345577889999998874 455778889999998888877776632 1211 0 000123455555667777677
Q ss_pred HHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccc
Q 019956 131 VKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQL 191 (333)
Q Consensus 131 ~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~ 191 (333)
++-.++|.|++.=+++...-+..+.+++++++++++||||+|..||+++.+..+|+.++..
T Consensus 79 lswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 79 LSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 8999999999999999999999999999999999999999999999999999999988753
No 33
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.84 E-value=2.6e-08 Score=80.00 Aligned_cols=71 Identities=24% Similarity=0.359 Sum_probs=63.0
Q ss_pred hhhhHHHH-HHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccC
Q 019956 122 YPIPAVLY-LVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNS 193 (333)
Q Consensus 122 ~~ipally-~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~ 193 (333)
...-+++. ..++.+.++|+++.| +...++.++.|+++++++++++|||+++++|.++++.++|+.++..++
T Consensus 37 ~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~ 108 (113)
T PF13536_consen 37 LILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSD 108 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence 33445554 489999999999999 588899999999999999999999999999999999999999988764
No 34
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=98.76 E-value=1.4e-09 Score=96.97 Aligned_cols=242 Identities=16% Similarity=0.196 Sum_probs=166.8
Q ss_pred HHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhhhhhhhHHHHHHHHHHHHHHHHcCC
Q 019956 65 IVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVIVYPIPAVLYLVKNLLQYYIFAYVD 144 (333)
Q Consensus 65 ~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ipally~~~n~l~~~al~~l~ 144 (333)
...++++.. -|+.-.|+..++-.++=-+++. +|++ .....|+. |.+.|+...-.|.+.--|.||.+
T Consensus 38 s~la~k~iN---~Pt~QtFl~Y~LLalVY~~~~~--fR~~------~~~~~~~h---Yilla~~DVEaNy~vV~AyQyTs 103 (336)
T KOG2766|consen 38 SELARKGIN---APTSQTFLNYVLLALVYGPIML--FRRK------YIKAKWRH---YILLAFVDVEANYFVVKAYQYTS 103 (336)
T ss_pred HHHHhccCC---CccHHHHHHHHHHHHHHhhHHH--hhhH------HHHHHHHH---hhheeEEeecccEEEeeehhhcc
Confidence 344554333 2666677777654444333331 3321 12233555 88888888889999999999999
Q ss_pred hhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccC---CCCccccchhhHHHHHHHHHHHHHHHHH
Q 019956 145 APGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNS---NSDRVLQTPLQGWIMAIVMALLSGFAGV 221 (333)
Q Consensus 145 ~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~---~~~~~~~~~~~G~~l~l~aa~~sala~v 221 (333)
-...+++-.-.++.+.++++++||.|+.+.|..|+++-..|+.++..++ +++...+++..|+.++++++.+.|..++
T Consensus 104 mtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv 183 (336)
T KOG2766|consen 104 MTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNV 183 (336)
T ss_pred hHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccc
Confidence 9999999999999999999999999999999999999999998876542 2233356899999999999999999999
Q ss_pred HHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCccccchHHHH--H-HHHHHHHHhHHHHHHhhhhhh
Q 019956 222 YTEAIMKKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVMNKGFFHGYSFITV--L-MILNHALSGIAVSMVMKYADN 298 (333)
Q Consensus 222 ~~e~~lk~~~~~~~~~~n~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~-~i~~~a~gg~~v~~v~k~~~~ 298 (333)
..|.+-|+.+ .....-++.++|.+...+-.. .+..+.... .|++... + -++.+-+-..+...++|..++
T Consensus 184 ~EEflvkn~d---~~elm~~lgLfGaIIsaIQ~i-~~~~~~~tl----~w~~~i~~yl~f~L~MFllYsl~pil~k~~~a 255 (336)
T KOG2766|consen 184 SEEFLVKNAD---RVELMGFLGLFGAIISAIQFI-FERHHVSTL----HWDSAIFLYLRFALTMFLLYSLAPILIKTNSA 255 (336)
T ss_pred cHHHHHhcCc---HHHHHHHHHHHHHHHHHHHHh-hhccceeeE----eehHHHHHHHHHHHHHHHHHHhhHHheecCCc
Confidence 9999998865 344455778888888877643 332222110 1222111 1 112233344455566677666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcchhhhc
Q 019956 299 IVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFL 330 (333)
Q Consensus 299 i~k~~~~~~~~v~t~lls~~lfge~lt~~~~l 330 (333)
..-+.....+=+++.++ ..||-+.++..++
T Consensus 256 T~~nlslLTsDmwsl~i--~~FgYhv~wLY~l 285 (336)
T KOG2766|consen 256 TMFNLSLLTSDMWSLLI--RTFGYHVDWLYFL 285 (336)
T ss_pred eEEEhhHhHHHHHHHHH--HHHhcchhhhhHH
Confidence 66566656666788777 7788888776554
No 35
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.56 E-value=1.7e-05 Score=72.77 Aligned_cols=201 Identities=11% Similarity=0.128 Sum_probs=130.8
Q ss_pred chhhhhhhhhHHHHHHHHHHHHHHHHcCChhHHHH-HHhhHHHHHHHHHHHHhcCccCHHHHH----HHHHHHhhhhccc
Q 019956 116 LDEVIVYPIPAVLYLVKNLLQYYIFAYVDAPGYQI-LKNLNIISTGVLYRIILKKKLSEIQWA----AFILLCCGCTTAQ 190 (333)
Q Consensus 116 ~~~~~~~~ipally~~~n~l~~~al~~l~~~~~~v-l~~~k~l~talls~l~Lkekls~~qw~----al~ll~~Gv~~v~ 190 (333)
.+.++.-.+.+++..+.+..+|.+.+++..+...= -...+++.+++..+++++|--+..+|. |+++..+|+.+..
T Consensus 42 ~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts 121 (269)
T PF06800_consen 42 GTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTS 121 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence 36677788899999999999999999999885544 447889999999999999999988887 8888999998887
Q ss_pred ccCCCCcc---ccchhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCc
Q 019956 191 LNSNSDRV---LQTPLQGWIMAIVMALLSGFAGVYTEAIMKKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVMNKGF 267 (333)
Q Consensus 191 ~~~~~~~~---~~~~~~G~~l~l~aa~~sala~v~~e~~lk~~~~~~~~~~n~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (333)
..++.++. .++...|+...+++.+.+..|.+..+. .+-++.+-+..|.+-+.+.+.+++... .+ .+
T Consensus 122 ~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~-~~~~~~~~~lPqaiGm~i~a~i~~~~~-----~~-----~~ 190 (269)
T PF06800_consen 122 YQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKA-FHVSGWSAFLPQAIGMLIGAFIFNLFS-----KK-----PF 190 (269)
T ss_pred cccccccccccccchhhHHHHHHHHHHHHHHHHHHHHh-cCCChhHhHHHHHHHHHHHHHHHhhcc-----cc-----cc
Confidence 66443321 235567999999999999999998665 233222134444444433333333322 11 11
Q ss_pred cccchHHHHHHHHHHHHHhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchh
Q 019956 268 FHGYSFITVLMILNHALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLA 327 (333)
Q Consensus 268 ~~g~~~~~~~~i~~~a~gg~~v~~v~k~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~ 327 (333)
++..++...+.-+.-+++.+..-+.....+...--..+..+++++++-|.++|+|+=+..
T Consensus 191 ~~k~~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~k 250 (269)
T PF06800_consen 191 FEKKSWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKK 250 (269)
T ss_pred cccchHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchh
Confidence 222222222222223333333333333323222223356789999999999999986654
No 36
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.53 E-value=3.8e-06 Score=70.41 Aligned_cols=139 Identities=12% Similarity=0.170 Sum_probs=103.9
Q ss_pred HHHHHHHHHHhHHHHHHHHhhcc---CCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC--Ccccc-----cchh
Q 019956 49 VVTLALTVLTSSQAILIVWSKRA---GKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDD--NRLST-----TLDE 118 (333)
Q Consensus 49 ~~l~ll~l~~~~~~ll~~~s~~~---~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~--~~~~~-----~~~~ 118 (333)
++.+.-++..+.+.+..|...++ .++..++....+.......++.++... ..++..... ..... +.+.
T Consensus 3 ~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~--~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 3 ILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAF--LLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHH--HHhhhhhhhHHHHhhhhhhcchHHH
Confidence 34455667777788777664333 346778888888888887777766543 222211000 00001 2344
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcc
Q 019956 119 VIVYPIPAVLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTA 189 (333)
Q Consensus 119 ~~~~~ipally~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v 189 (333)
.......+++....|...|..+++++|.+++++.+.|.+.+.++++++++|+++..|+.|+.+.++|+.+-
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y 151 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY 151 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence 55677788888999999999999999999999999999999999999999999999999999999998764
No 37
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=98.49 E-value=8.9e-06 Score=71.66 Aligned_cols=262 Identities=14% Similarity=0.182 Sum_probs=155.5
Q ss_pred HHHHhHHHHHHHHhhcc--CCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhhhhhhhHHHHHHH
Q 019956 55 TVLTSSQAILIVWSKRA--GKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVIVYPIPAVLYLVK 132 (333)
Q Consensus 55 ~l~~~~~~ll~~~s~~~--~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ipally~~~ 132 (333)
.+.++...+++...++. ....|+.--+.+...-+-+.+.+.++.+ .+.-+ -| .++...+..|+++-.+.
T Consensus 11 ~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~----l~~~~-fR----~t~aK~WfpiSfLLv~M 81 (309)
T COG5070 11 SLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKF----LRLVE-FR----LTKAKKWFPISFLLVVM 81 (309)
T ss_pred HHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHH----HhHhh-ee----hhhhhhhcCHHHHHHHH
Confidence 34566666776665432 2345665555555555556666666632 11101 11 22333355666665555
Q ss_pred HHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccCCCC--ccccchhhHHHHHH
Q 019956 133 NLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNSNSD--RVLQTPLQGWIMAI 210 (333)
Q Consensus 133 n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~~~~--~~~~~~~~G~~l~l 210 (333)
-.-.--+++|++.+.|.+.+++.++.+|..-++++|.|++.....+.++..+.-.+-...+... -..+..+.|++.+.
T Consensus 82 Iyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~ 161 (309)
T COG5070 82 IYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMF 161 (309)
T ss_pred HHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEe
Confidence 5555668899999999999999999999999999999999999999888776654433221100 01235568999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHH-HHHhhhhhhhhcCccccchHHHHHHHHHHHHHhH--
Q 019956 211 VMALLSGFAGVYTEAIMKKRPSRNINVQNFWLYVFGMAFNAVA-IVIQDFDAVMNKGFFHGYSFITVLMILNHALSGI-- 287 (333)
Q Consensus 211 ~aa~~sala~v~~e~~lk~~~~~~~~~~n~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~i~~~a~gg~-- 287 (333)
..|+.++..-...||..|-.+.. -+....+-...+.+..+.. .+.+||+.. +.-.+++.-....++-.++...
T Consensus 162 ~NclssaafVL~mrkri~ltNf~-d~dtmfYnNllslPiL~~~s~~~edws~~---n~annl~~d~l~am~ISgl~svgi 237 (309)
T COG5070 162 TNCLSSAAFVLIMRKRIKLTNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPG---NLANNLSVDSLMAMFISGLCSVGI 237 (309)
T ss_pred hhhHhHHHHHHHHHHhhcccccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcc---hhhcCCChHHHHHHHHHHHHHhhh
Confidence 99999999988888877643211 1222223345566655533 345677532 1222344434333332233222
Q ss_pred --HHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhh
Q 019956 288 --AVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFF 329 (333)
Q Consensus 288 --~v~~v~k~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~ 329 (333)
+.+..++-.++..-...-+..-....+.|.++|||+.+..-+
T Consensus 238 Sy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si 281 (309)
T COG5070 238 SYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSI 281 (309)
T ss_pred hhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHH
Confidence 233334444444433334444466778889999999886544
No 38
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.49 E-value=8.7e-07 Score=80.14 Aligned_cols=201 Identities=17% Similarity=0.229 Sum_probs=141.1
Q ss_pred HHHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccCCCCccccchhhH
Q 019956 126 AVLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNSNSDRVLQTPLQG 205 (333)
Q Consensus 126 ally~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~~~~~~~~~~~~G 205 (333)
++.+.+.-....+-++|++.+-|++-.++..+|+.++++++||+|=+..-..+-.+...|--+=. +.++ ....-...|
T Consensus 109 svVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGv-dqE~-~~~~ls~~G 186 (347)
T KOG1442|consen 109 SVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGV-DQEG-STGTLSWIG 186 (347)
T ss_pred hheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheecc-cccc-ccCccchhh
Confidence 33344455555667899999999999999999999999999999988776555444444432211 1110 112234579
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHh-hhhhhhhcCccccchHHHHHHHHHHHH
Q 019956 206 WIMAIVMALLSGFAGVYTEAIMKKRPSRNINVQNFWLYVFGMAFNAVAIVIQ-DFDAVMNKGFFHGYSFITVLMILNHAL 284 (333)
Q Consensus 206 ~~l~l~aa~~sala~v~~e~~lk~~~~~~~~~~n~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~i~~~a~ 284 (333)
.++-+.++++-|+-++|.+|.+-...+ .+|.-+++...++.++.++.+.+. |.+++ .+|-|-+...-|.+....++
T Consensus 187 vifGVlaSl~vAlnaiytkk~l~~v~~-~iw~lt~ynnv~a~lLflpll~lnge~~~v--~~~~~l~a~~Fw~~mtLsgl 263 (347)
T KOG1442|consen 187 VIFGVLASLAVALNAIYTKKVLPPVGD-CIWRLTAYNNVNALLLFLPLLILNGEFQAV--VGFPHLPAIKFWILMTLSGL 263 (347)
T ss_pred hHHHHHHHHHHHHHHHhhheecccccC-eehhhHHHHHHHHHHHHHHHHHHcchHHHH--cCcccchHHHHHHHHHHHHH
Confidence 999999999999999999987655444 689989999999888887766532 33332 24444556677888888888
Q ss_pred HhHHHHHHh----hhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhcc
Q 019956 285 SGIAVSMVM----KYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLG 331 (333)
Q Consensus 285 gg~~v~~v~----k~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~lG 331 (333)
.|..+.++. |-.+....+...+..-..-+++++.+++|..+..-|-|
T Consensus 264 fgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwts 314 (347)
T KOG1442|consen 264 FGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTS 314 (347)
T ss_pred HHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeee
Confidence 887777763 55566655555555556677888888999887765544
No 39
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.48 E-value=7.5e-06 Score=74.69 Aligned_cols=132 Identities=14% Similarity=-0.001 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhhhhhhh
Q 019956 46 RKSVVTLALTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVIVYPIP 125 (333)
Q Consensus 46 ~~~~~l~ll~l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ip 125 (333)
+..++.++..+.|+.+.+..|...++.+ .++.+....+.....++.++.. ...+.. . . .++++.......
T Consensus 128 ~G~~~~l~a~~~~a~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~---~~~~~~--~-~--~~~~~~~~~~~~ 197 (260)
T TIGR00950 128 AGLLLGLGSGISFALGTVLYKRLVKKEG--PELLQFTGWVLLLGALLLLPFA---WFLGPN--P-Q--ALSLQWGALLYL 197 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHhhcCC--chHHHHHHHHHHHHHHHHHHHH---HhcCCC--C-C--cchHHHHHHHHH
Confidence 4556777788899999999887643211 1122333234445444444443 222211 1 1 123343334444
Q ss_pred HHH-HHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhh
Q 019956 126 AVL-YLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCT 187 (333)
Q Consensus 126 all-y~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~ 187 (333)
+++ ..+...+.+.++++.++++.+++..+.|+++++++++++||++++.||.|..+.+.|++
T Consensus 198 ~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 198 GLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 544 46788899999999999999999999999999999999999999999999999999874
No 40
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.43 E-value=5.6e-06 Score=69.41 Aligned_cols=128 Identities=15% Similarity=0.211 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcC----CCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc--Cccc-cc--hHHH
Q 019956 205 GWIMAIVMALLSGFAGVYTEAIMKKR----PSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVMNK--GFFH-GY--SFIT 275 (333)
Q Consensus 205 G~~l~l~aa~~sala~v~~e~~lk~~----~~~~~~~~n~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~-g~--~~~~ 275 (333)
|.+++++++++.|+..++.|+.+|+. ...+.+....++...+.++.++..+..|+.+..+. .... .. +...
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 67889999999999999999999984 22245555556667777777766655444322110 1111 00 2233
Q ss_pred HHHHHHHH----HHhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 276 VLMILNHA----LSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 276 ~~~i~~~a----~gg~~v~~v~k~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
+..++..+ +.......++++.+++.......+..++++++|+++|||++|...++|.
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~ 141 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGI 141 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHH
Confidence 33333222 3345556778999999999999999999999999999999999999885
No 41
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=98.39 E-value=3.5e-06 Score=72.87 Aligned_cols=100 Identities=16% Similarity=0.143 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccCCCCccccchhhHHH
Q 019956 128 LYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNSNSDRVLQTPLQGWI 207 (333)
Q Consensus 128 ly~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~~~~~~~~~~~~G~~ 207 (333)
+.+..|+++..+++.++++..+.+..++-.++=++++++||.|+...+.++.++..-|+.++.+.++. ..+...|+.
T Consensus 62 ~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~---~a~e~iGi~ 138 (290)
T KOG4314|consen 62 FWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNE---HADEIIGIA 138 (290)
T ss_pred EEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccch---hhhhhhhHH
Confidence 45789999999999999999999999999999999999999999999999999999999998864322 235689999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcC
Q 019956 208 MAIVMALLSGFAGVYTEAIMKKR 230 (333)
Q Consensus 208 l~l~aa~~sala~v~~e~~lk~~ 230 (333)
+.+.+++.+|++-|.+|+.....
T Consensus 139 ~AV~SA~~aAlYKV~FK~~iGnA 161 (290)
T KOG4314|consen 139 CAVGSAFMAALYKVLFKMFIGNA 161 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHhccC
Confidence 99999999999999999887653
No 42
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.39 E-value=2.9e-06 Score=67.98 Aligned_cols=75 Identities=11% Similarity=0.080 Sum_probs=65.1
Q ss_pred chhhhhhhhhHHHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhccc
Q 019956 116 LDEVIVYPIPAVLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQ 190 (333)
Q Consensus 116 ~~~~~~~~ipally~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~ 190 (333)
|+.....++.-+.|.+...+...+++.+|.+....+.++.++.+++++++++|||++++||+++.+.++|+.++.
T Consensus 34 ~~~l~~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 34 KHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 333333444446688999999999999999999999999999999999999999999999999999999998775
No 43
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.18 E-value=6.6e-05 Score=72.12 Aligned_cols=142 Identities=11% Similarity=0.114 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhhccCC---ccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-C-CC----Cccc-ccc
Q 019956 47 KSVVTLALTVLTSSQAILIVWSKRAGK---YEYSVTTANFLVETLKCALSLAALARIWNHEGV-T-DD----NRLS-TTL 116 (333)
Q Consensus 47 ~~~~l~ll~l~~~~~~ll~~~s~~~~~---~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~-~-~~----~~~~-~~~ 116 (333)
+.++.++-.+.++.+.+..|...++.+ +++++.......-.+..++++++.. ..+... . .. .... ..+
T Consensus 195 G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~--~~e~~~~~~~~~~~~~~~~~~~~ 272 (350)
T PTZ00343 195 AFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVL--FFEGKKWVPVWTNYTANMTNYTK 272 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHH--HHhhHHHHHHHHHhhhcccccch
Confidence 555566667888899988876433211 2456665544445555555555542 111100 0 00 0000 011
Q ss_pred hh-hhhhhhhHHHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhccc
Q 019956 117 DE-VIVYPIPAVLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQ 190 (333)
Q Consensus 117 ~~-~~~~~ipally~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~ 190 (333)
.. .......++.|.++|.+.|.+++.+++.++++...+||+++.++++++++|++++.|++|.++.+.|+.+.+
T Consensus 273 ~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs 347 (350)
T PTZ00343 273 GIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS 347 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence 11 223445677789999999999999999999999999999999999999999999999999999999998754
No 44
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.14 E-value=1.6e-05 Score=74.57 Aligned_cols=141 Identities=9% Similarity=0.017 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC-ccc-----ccchhhh
Q 019956 47 KSVVTLALTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDN-RLS-----TTLDEVI 120 (333)
Q Consensus 47 ~~~~l~ll~l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~-~~~-----~~~~~~~ 120 (333)
+.++.++..+.++.+.+..|...++ +++++.+..........++.+++.. .. ++..... ... .......
T Consensus 146 G~~~~l~a~~~~a~~~v~~k~~~~~--~~~~~~~~~~~~~~~~~~~l~p~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~ 220 (302)
T TIGR00817 146 GFLSAMISNITFVSRNIFSKKAMTI--KSLDKTNLYAYISIMSLFLLSPPAF--IT-EGPPFLPHGFMQAISGVNVTKIY 220 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcc--CCCCcccHHHHHHHHHHHHHHHHHH--HH-cchHHHHHHHHHhhcccCchHHH
Confidence 5556666778888888887654322 2466766666666555555555432 11 1110000 000 0011111
Q ss_pred h-hhhhHH-HHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhccccc
Q 019956 121 V-YPIPAV-LYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLN 192 (333)
Q Consensus 121 ~-~~ipal-ly~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~ 192 (333)
. ....+. .+...|.+.|.+++++++.++++....+|++++++++++++|+++..|++|..+.+.|+.+.+..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~ 294 (302)
T TIGR00817 221 TVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRV 294 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHH
Confidence 1 223333 46667788889999999999999999999999999999999999999999999999999988754
No 45
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.14 E-value=9.8e-05 Score=69.13 Aligned_cols=132 Identities=10% Similarity=-0.008 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhhhhhhhH
Q 019956 47 KSVVTLALTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVIVYPIPA 126 (333)
Q Consensus 47 ~~~~l~ll~l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ipa 126 (333)
..++.++..+.|+.+.++.|..++ ++++.+..+.. .. ++..+... . .+.. . ...++........-+
T Consensus 157 G~~~~l~aa~~~A~~~v~~k~~~~----~~~~~~~~~~~--~~-~~l~~~~~--~-~~~~-~---~~~~~~~~~~l~~~~ 222 (295)
T PRK11689 157 SYGLAFIGAFIWAAYCNVTRKYAR----GKNGITLFFIL--TA-LALWIKYF--L-SPQP-A---MVFSLPAIIKLLLAA 222 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccC----CCCchhHHHHH--HH-HHHHHHHH--H-hcCc-c---ccCCHHHHHHHHHHH
Confidence 556677778899999999877642 23343332211 11 11111111 2 1111 1 112233333333334
Q ss_pred HHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhccccc
Q 019956 127 VLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLN 192 (333)
Q Consensus 127 lly~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~ 192 (333)
+.-.+...+.+.+++++|++..+++..+.|++.+++++++++|+++..||+|.++.+.|+.+....
T Consensus 223 ~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~ 288 (295)
T PRK11689 223 AAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA 288 (295)
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence 444568889999999999999999999999999999999999999999999999999999877643
No 46
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.06 E-value=0.00021 Score=66.85 Aligned_cols=134 Identities=13% Similarity=0.042 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhhhhhhh
Q 019956 46 RKSVVTLALTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVIVYPIP 125 (333)
Q Consensus 46 ~~~~~l~ll~l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ip 125 (333)
...++.++..+.++.+.++.|...+ ++++.+... ..++..++..+.. ...... ...++.........
T Consensus 148 ~G~ll~l~aa~~~a~~~v~~r~~~~----~~~~~~~~~-~~~~~~~~l~~~~---~~~~~~-----~~~~~~~~~~~l~l 214 (293)
T PRK10532 148 TGAALALGAGACWAIYILSGQRAGA----EHGPATVAI-GSLIAALIFVPIG---ALQAGE-----ALWHWSILPLGLAV 214 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc----cCCchHHHH-HHHHHHHHHHHHH---HHccCc-----ccCCHHHHHHHHHH
Confidence 3556666778889999998876632 233433322 2233222222222 111110 11122221111233
Q ss_pred HHH-HHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhccccc
Q 019956 126 AVL-YLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLN 192 (333)
Q Consensus 126 all-y~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~ 192 (333)
+++ -.++..+++.+++++++...+++..+.|++++++++++++|++++.||+|..+.+.|+......
T Consensus 215 gv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~ 282 (293)
T PRK10532 215 AILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT 282 (293)
T ss_pred HHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence 333 3467789999999999999999999999999999999999999999999999999999887543
No 47
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.06 E-value=0.0002 Score=69.01 Aligned_cols=62 Identities=19% Similarity=0.124 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhccccc
Q 019956 131 VKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLN 192 (333)
Q Consensus 131 ~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~ 192 (333)
+...+.++++++++|+..++...+.|++++++++++|+|++++.|++|.++.+.|+.+++.+
T Consensus 268 lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~ 329 (358)
T PLN00411 268 VYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWG 329 (358)
T ss_pred HHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhh
Confidence 45667888999999999999999999999999999999999999999999999999998754
No 48
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=97.97 E-value=6.4e-05 Score=69.82 Aligned_cols=62 Identities=13% Similarity=0.119 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhc
Q 019956 127 VLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTT 188 (333)
Q Consensus 127 lly~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~ 188 (333)
+...+.+.+.+.++++.|++....+.++.|+++.+++++++||++++.||.|..+.++|+.+
T Consensus 219 ~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 219 LMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 33457888999999999999999999999999999999999999999999999999999875
No 49
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=97.97 E-value=0.00027 Score=66.00 Aligned_cols=135 Identities=13% Similarity=0.019 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhhhhhhhH
Q 019956 47 KSVVTLALTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVIVYPIPA 126 (333)
Q Consensus 47 ~~~~l~ll~l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ipa 126 (333)
..+..++..+.|+...+..|... ++ . +.......-.+...+..++. ...+.. .. ...+++.......-+
T Consensus 151 G~l~~l~a~~~~a~~~~~~~~~~---~~-~-~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~-~~~~~~~~~~i~~l~ 219 (292)
T PRK11272 151 GAILILIASASWAFGSVWSSRLP---LP-V-GMMAGAAEMLAAGVVLLIAS---LLSGER--LT-ALPTLSGFLALGYLA 219 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC---CC-c-chHHHHHHHHHHHHHHHHHH---HHcCCc--cc-ccCCHHHHHHHHHHH
Confidence 45555566778888887765532 11 1 22222222222222222222 111111 10 111223333333334
Q ss_pred HH-HHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhccccc
Q 019956 127 VL-YLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLN 192 (333)
Q Consensus 127 ll-y~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~ 192 (333)
++ -.+...+.+.+++++++++.+++..+.|+++++++++++||++++.||+|.++.+.|+.+....
T Consensus 220 i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~ 286 (292)
T PRK11272 220 VFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG 286 (292)
T ss_pred HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 43 3467889999999999999999999999999999999999999999999999999999887653
No 50
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=97.94 E-value=4.3e-05 Score=61.07 Aligned_cols=114 Identities=15% Similarity=0.229 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCccccchHHHHHHHHHHHHHhHHHHHHh
Q 019956 214 LLSGFAGVYTEAIMKKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVMNKGFFHGYSFITVLMILNHALSGIAVSMVM 293 (333)
Q Consensus 214 ~~sala~v~~e~~lk~~~~~~~~~~n~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~a~gg~~v~~v~ 293 (333)
++||.++++.|+..|+.+ +...+.+....+.+ .++.....+..+..+.. .+.+.......++..+++..+....+
T Consensus 1 ~~~a~~~~~~k~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~ 75 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKIS---PLSITFWRFLIAGI-LLILLLILGRKPFKNLS-PRQWLWLLFLGLLGTALAYLLYFYAL 75 (126)
T ss_pred ceeeeHHHHHHHHhccCC---HHHHHHHHHHHHHH-HHHHHHhhccccccCCC-hhhhhhhhHhhccceehHHHHHHHHH
Confidence 468899999999998854 34344444555544 33322222221100000 00111122233334677778888889
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 294 KYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 294 k~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
|+.+...........|+++.++++++++|+++...++|.
T Consensus 76 ~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~ 114 (126)
T PF00892_consen 76 KYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGI 114 (126)
T ss_pred HhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHH
Confidence 999999999999999999999999999999999999885
No 51
>COG2510 Predicted membrane protein [Function unknown]
Probab=97.92 E-value=4.1e-05 Score=61.85 Aligned_cols=118 Identities=17% Similarity=0.248 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCC-CchHHHHHHHHHHHHHHHHHHHHH-hhhhhhhhcCccccchHHHHHHH---
Q 019956 205 GWIMAIVMALLSGFAGVYTEAIMKKRPS-RNINVQNFWLYVFGMAFNAVAIVI-QDFDAVMNKGFFHGYSFITVLMI--- 279 (333)
Q Consensus 205 G~~l~l~aa~~sala~v~~e~~lk~~~~-~~~~~~n~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~i--- 279 (333)
-.++.+++++.+|+..++.|--+++.++ .-..+++.- ...+.....+. ..++... -. +.-.|.-+
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiV----i~~~l~~v~~~~g~~~~~~---~~---~~k~~lflilS 73 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIV----ILIFLLIVLLVTGNWQAGG---EI---GPKSWLFLILS 73 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHH----HHHHHHHHHHhcCceeccc---cc---CcceehhhhHH
Confidence 3567899999999999998877776443 122333332 22222222221 1222111 11 22222222
Q ss_pred -HHHHHHhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 280 -LNHALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 280 -~~~a~gg~~v~~v~k~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
+..+++.++..+.+|..++....+....++++++++|++++||.+|..+++|.
T Consensus 74 Gla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~ 127 (140)
T COG2510 74 GLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGI 127 (140)
T ss_pred HHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 35566777888889999999999999999999999999999999999999985
No 52
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.82 E-value=0.00033 Score=65.54 Aligned_cols=133 Identities=11% Similarity=0.029 Sum_probs=93.9
Q ss_pred hHHHHHHHHHHHHHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhhhhhh
Q 019956 45 KRKSVVTLALTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVIVYPI 124 (333)
Q Consensus 45 ~~~~~~l~ll~l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i 124 (333)
++..+..++..+.++.+.+..|... ++|.+.++.....-++.+..+... .++. ++. ..+..+...+
T Consensus 151 ~~Gi~~~l~sg~~y~~~~~~~~~~~------~~~~~~~~~~~~g~~~~~~~~~~~-~~~~----~~~---~~~~~~~~~~ 216 (290)
T TIGR00776 151 KKGILLLLMSTIGYLVYVVVAKAFG------VDGLSVLLPQAIGMVIGGIIFNLG-HILA----KPL---KKYAILLNIL 216 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHcC------CCcceehhHHHHHHHHHHHHHHHH-Hhcc----cch---HHHHHHHHHH
Confidence 4455566666788888888888652 556555444443222223332211 2111 110 1223334455
Q ss_pred hHHHHHHHHHHHHHHHH-cCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHH----HHHHHHHhhhhcccc
Q 019956 125 PAVLYLVKNLLQYYIFA-YVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQW----AAFILLCCGCTTAQL 191 (333)
Q Consensus 125 pally~~~n~l~~~al~-~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw----~al~ll~~Gv~~v~~ 191 (333)
.+++..+.|.+++.+.+ ++++++..++.+..|+..++++++++||+.+++|+ .+.++...|+.++..
T Consensus 217 ~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 217 PGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI 288 (290)
T ss_pred HHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence 88888889999999999 99999999999999999999999999999999999 999999999887653
No 53
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=97.75 E-value=0.0015 Score=61.23 Aligned_cols=63 Identities=13% Similarity=0.102 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhccccc
Q 019956 130 LVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLN 192 (333)
Q Consensus 130 ~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~ 192 (333)
.+...+.+.+++++++.+.+.+..+.|++.+++++++++|+++..||+|..+.++|+.+...+
T Consensus 226 ~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~ 288 (299)
T PRK11453 226 IVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG 288 (299)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence 357778889999999999999999999999999999999999999999999999999887654
No 54
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.71 E-value=0.002 Score=60.54 Aligned_cols=65 Identities=20% Similarity=0.328 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccc
Q 019956 127 VLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQL 191 (333)
Q Consensus 127 lly~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~ 191 (333)
+++.+.+.+.+.|+.+.|++..+=+....+++.++++..++|||+++++|.|..+.++|..++..
T Consensus 58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~ 122 (300)
T PF05653_consen 58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI 122 (300)
T ss_pred HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence 34678999999999999999999999999999999999999999999999999999999887654
No 55
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.71 E-value=0.00039 Score=56.30 Aligned_cols=71 Identities=11% Similarity=0.178 Sum_probs=62.6
Q ss_pred hhhhHHHHHHHHHHHHHHHHcCChhHHHHH-HhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhccccc
Q 019956 122 YPIPAVLYLVKNLLQYYIFAYVDAPGYQIL-KNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLN 192 (333)
Q Consensus 122 ~~ipally~~~n~l~~~al~~l~~~~~~vl-~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~ 192 (333)
..+..++|.++..+...+++++|.+....+ ...-.+.+++.+++++||+++..|++++.+.++|+..+...
T Consensus 33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~ 104 (120)
T PRK10452 33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG 104 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence 355667789999999999999999965555 57999999999999999999999999999999999988654
No 56
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.65 E-value=0.00036 Score=57.35 Aligned_cols=68 Identities=12% Similarity=0.024 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHH--HhcCccCHHHHHHHHHHHhhhhcccccCC
Q 019956 127 VLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRI--ILKKKLSEIQWAAFILLCCGCTTAQLNSN 194 (333)
Q Consensus 127 lly~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l--~Lkekls~~qw~al~ll~~Gv~~v~~~~~ 194 (333)
++|.+...+...+++.+|++...-+.+..+..+++.++. ++||++|+.||+++.+.++|+.++..++.
T Consensus 56 ~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~ 125 (129)
T PRK02971 56 AGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT 125 (129)
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence 347889999999999999999998888888888888885 89999999999999999999999876533
No 57
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.65 E-value=0.00049 Score=54.42 Aligned_cols=70 Identities=13% Similarity=0.212 Sum_probs=61.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHcCChh-HHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccc
Q 019956 122 YPIPAVLYLVKNLLQYYIFAYVDAP-GYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQL 191 (333)
Q Consensus 122 ~~ipally~~~n~l~~~al~~l~~~-~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~ 191 (333)
..+..+.|.++..+...+++.+|.+ .|.+-...-.+.+++.+++++||++++.|++++.+..+|+..+..
T Consensus 32 ~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 32 SIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 3445667899999999999999988 566666799999999999999999999999999999999988754
No 58
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.65 E-value=0.0012 Score=61.98 Aligned_cols=144 Identities=16% Similarity=0.139 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhhhhhhhH
Q 019956 47 KSVVTLALTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVIVYPIPA 126 (333)
Q Consensus 47 ~~~~l~ll~l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ipa 126 (333)
+++++++-.+..+.+.+.-+...+ +++.++...++...+..+++.......-...+.....+....++.......+-+
T Consensus 155 G~~ll~~sl~~~a~~~~~qe~~~~--~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s 232 (303)
T PF08449_consen 155 GIILLLLSLLLDAFTGVYQEKLFK--KYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFS 232 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHH
Confidence 677777777788888877654332 233457888888888888776665531001111101111112222223334445
Q ss_pred HHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhccccc
Q 019956 127 VLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLN 192 (333)
Q Consensus 127 lly~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~ 192 (333)
+..++.+...+.-.+..++.+..++..++-+.+.++|.++.++++++.||.|+++.+.|..+-...
T Consensus 233 ~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~ 298 (303)
T PF08449_consen 233 LTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYA 298 (303)
T ss_pred HHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHh
Confidence 555566666677789999999999999999999999999999999999999999999999876544
No 59
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.63 E-value=0.056 Score=51.72 Aligned_cols=167 Identities=12% Similarity=0.011 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccc-ccchhhhhhhh
Q 019956 46 RKSVVTLALTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLS-TTLDEVIVYPI 124 (333)
Q Consensus 46 ~~~~~l~ll~l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~i 124 (333)
..++.+++-.+.+++..+-.|..|+..=+.|+. ...++.+++--.. ...+ ..+.. ..... .+.+....-.+
T Consensus 7 ~G~~~~~i~~~~~GS~~~p~K~~k~w~wE~~W~-v~gi~~wl~~~~~-~g~~----~~~~f--~~~~~~~~~~~~~~~~l 78 (345)
T PRK13499 7 LGIIWHLIGGASSGSFYAPFKKVKKWSWETMWS-VGGIFSWLILPWL-IAAL----LLPDF--WAYYSSFSGSTLLPVFL 78 (345)
T ss_pred HHHHHHHHHHHHhhcccccccccCCCchhHHHH-HHHHHHHHHHHHH-HHHH----HhhhH--HHHHHhcCHHHHHHHHH
Confidence 467788888999999999988866543344544 2223333332111 0111 00000 00111 23455556677
Q ss_pred hHHHHHHHHHHHHHHHHcCChh-HHHHHHhhHHHHHHHHHHHHhcCcc---CH----HHHHHHHHHHhhhhcccc----c
Q 019956 125 PAVLYLVKNLLQYYIFAYVDAP-GYQILKNLNIISTGVLYRIILKKKL---SE----IQWAAFILLCCGCTTAQL----N 192 (333)
Q Consensus 125 pally~~~n~l~~~al~~l~~~-~~~vl~~~k~l~talls~l~Lkekl---s~----~qw~al~ll~~Gv~~v~~----~ 192 (333)
-+++..+.|..++.+.+++..+ +.-+-..+..+..+++..++++|=- +. .-..|+++..+|+.+... .
T Consensus 79 ~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k 158 (345)
T PRK13499 79 FGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLK 158 (345)
T ss_pred HHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 8888999999999999999988 5556668889999999999988532 33 345677788889888776 3
Q ss_pred CCCC----ccccchhhHHHHHHHHHHHHHHHH
Q 019956 193 SNSD----RVLQTPLQGWIMAIVMALLSGFAG 220 (333)
Q Consensus 193 ~~~~----~~~~~~~~G~~l~l~aa~~sala~ 220 (333)
+..+ ....+...|+...+++.+.+++++
T Consensus 159 ~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~ 190 (345)
T PRK13499 159 ERKMGIKKAEEFNLKKGLILAVMSGIFSACFS 190 (345)
T ss_pred ccccccccccccchHhHHHHHHHHHHHHHHHH
Confidence 2211 122356789999999999999999
No 60
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.62 E-value=0.00057 Score=54.38 Aligned_cols=69 Identities=16% Similarity=0.198 Sum_probs=60.9
Q ss_pred hhhhHHHHHHHHHHHHHHHHcCChh-HHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhccc
Q 019956 122 YPIPAVLYLVKNLLQYYIFAYVDAP-GYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQ 190 (333)
Q Consensus 122 ~~ipally~~~n~l~~~al~~l~~~-~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~ 190 (333)
..+..+.|.++..+.-.+++++|.+ .|.+-...-.+.+++.+++++||++++.|++++.+.+.|+....
T Consensus 38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 4555667889999999999999988 56666778999999999999999999999999999999998764
No 61
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=97.61 E-value=0.003 Score=59.17 Aligned_cols=65 Identities=8% Similarity=-0.025 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhccccc
Q 019956 128 LYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLN 192 (333)
Q Consensus 128 ly~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~ 192 (333)
.-.+...+.+.+++++|++..+.+....|++..++++++++|++++.|+.+..+.++|+.++..+
T Consensus 222 ~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~ 286 (296)
T PRK15430 222 VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMD 286 (296)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 34578889999999999999999999999999999999999999999999999998888877654
No 62
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.61 E-value=0.00056 Score=53.79 Aligned_cols=70 Identities=19% Similarity=0.252 Sum_probs=62.1
Q ss_pred hhhhHHHHHHHHHHHHHHHHcCChh-HHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccc
Q 019956 122 YPIPAVLYLVKNLLQYYIFAYVDAP-GYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQL 191 (333)
Q Consensus 122 ~~ipally~~~n~l~~~al~~l~~~-~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~ 191 (333)
..+..+.|.++..+.-.+++++|.+ .|.+-...-++.|++.+++++||++++.|++++.+..+|+.....
T Consensus 33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 4556667888999999999999988 677778899999999999999999999999999999999987654
No 63
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.56 E-value=0.00074 Score=53.89 Aligned_cols=71 Identities=15% Similarity=0.179 Sum_probs=61.5
Q ss_pred hhhhHHHHHHHHHHHHHHHHcCChhHHHHH-HhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhccccc
Q 019956 122 YPIPAVLYLVKNLLQYYIFAYVDAPGYQIL-KNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLN 192 (333)
Q Consensus 122 ~~ipally~~~n~l~~~al~~l~~~~~~vl-~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~ 192 (333)
....-+.|.++..+...+++.+|.+....+ ...-.+.+++.+++++||++++.|++++.+.++|+..+...
T Consensus 33 ~i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 33 SVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 344566688899999999999999865555 66899999999999999999999999999999999988654
No 64
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=97.41 E-value=0.0041 Score=56.20 Aligned_cols=60 Identities=18% Similarity=0.209 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcc
Q 019956 130 LVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTA 189 (333)
Q Consensus 130 ~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v 189 (333)
.+-..+..++++.+|..+|.++.++.|.+.|+..+++|+|++|..||+++.+...+.+=.
T Consensus 221 alPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~ 280 (292)
T COG5006 221 ALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGS 280 (292)
T ss_pred ccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcc
Confidence 456778889999999999999999999999999999999999999999999887776633
No 65
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.35 E-value=0.004 Score=57.29 Aligned_cols=124 Identities=12% Similarity=0.014 Sum_probs=90.3
Q ss_pred hhhhhHHHHHHHHHHHHHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhh
Q 019956 41 LANWKRKSVVTLALTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVI 120 (333)
Q Consensus 41 ~~~~~~~~~~l~ll~l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 120 (333)
+.+.++....+++-++.+..+..+.|+... ++.+ .++-+.+.++++..++. ...+ ...+. |..+
T Consensus 133 ~~~~~kgi~~Ll~stigy~~Y~~~~~~~~~------~~~~-~~lPqaiGm~i~a~i~~--~~~~---~~~~~----k~~~ 196 (269)
T PF06800_consen 133 KSNMKKGILALLISTIGYWIYSVIPKAFHV------SGWS-AFLPQAIGMLIGAFIFN--LFSK---KPFFE----KKSW 196 (269)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHhcCC------ChhH-hHHHHHHHHHHHHHHHh--hccc---ccccc----cchH
Confidence 345556677777788899999999888533 3433 34455566666544442 1111 11111 2334
Q ss_pred hhhhhHHHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHH
Q 019956 121 VYPIPAVLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFI 180 (333)
Q Consensus 121 ~~~ipally~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ 180 (333)
+-.++++++.+.|.+.+++.+..-.++.-.++|+.++..++.+.++|||+=+++++..++
T Consensus 197 ~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~ 256 (269)
T PF06800_consen 197 KNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTL 256 (269)
T ss_pred HhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHH
Confidence 457899999999999999999999999999999999999999999999999999886544
No 66
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=97.19 E-value=0.01 Score=54.17 Aligned_cols=125 Identities=11% Similarity=0.144 Sum_probs=75.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHH-hhhhhh-hhcCccccchHH--HHHHH
Q 019956 204 QGWIMAIVMALLSGFAGVYTEAIMKKRPSRNINVQNFWLYVFGMAFNAVAIVI-QDFDAV-MNKGFFHGYSFI--TVLMI 279 (333)
Q Consensus 204 ~G~~l~l~aa~~sala~v~~e~~lk~~~~~~~~~~n~~l~~~~~~~~~~~~~~-~~~~~~-~~~~~~~g~~~~--~~~~i 279 (333)
.|++++++++++||..++..|. ..+. ++......=.+++.++.++.... .+++.. .+....+..... .....
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~---~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 77 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LKPL---PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCG 77 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hccC---CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHH
Confidence 3889999999999999999987 3332 23322222233444443332211 121110 000000000111 11111
Q ss_pred HHHHHHhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 280 LNHALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 280 ~~~a~gg~~v~~v~k~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
+..++...+....+++.+........+..|++++++++++++|+++...++|.
T Consensus 78 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~ 130 (256)
T TIGR00688 78 LLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAV 130 (256)
T ss_pred HHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 22445556667778888877777888899999999999999999999998874
No 67
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.16 E-value=0.034 Score=50.74 Aligned_cols=77 Identities=22% Similarity=0.228 Sum_probs=66.1
Q ss_pred chhhhhhhhhHHHHH-HHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhccccc
Q 019956 116 LDEVIVYPIPAVLYL-VKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLN 192 (333)
Q Consensus 116 ~~~~~~~~ipally~-~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~ 192 (333)
++........+++-. +...+.+.+++..++.....+..+.|++..++++++++|+.+..||.|..+.+.|+.+....
T Consensus 211 ~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 211 SRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 344445555555555 58899999999999999999999999999999999999999999999999999999887654
No 68
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=96.94 E-value=0.002 Score=60.74 Aligned_cols=141 Identities=12% Similarity=0.101 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHH-HHHHHHHhhcCCCCCCcccccch-hhhhhhh
Q 019956 47 KSVVTLALTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSL-AALARIWNHEGVTDDNRLSTTLD-EVIVYPI 124 (333)
Q Consensus 47 ~~~~l~ll~l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l-~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~i 124 (333)
+.+....-++..+.+-++.+....+.+++.++.....-..-+.+++.+ ++.. .+++.....-....|. ....+..
T Consensus 164 G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 240 (316)
T KOG1441|consen 164 GFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLD---YVEGNKFVGFLTAPWFVTFLILLL 240 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHh---hhcccceeeeeccccchhhHHHHH
Confidence 444444556677777777766554445667777666555444444444 5442 2222111000111221 2334444
Q ss_pred hHHHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhccc
Q 019956 125 PAVLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQ 190 (333)
Q Consensus 125 pally~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~ 190 (333)
-++++...|...|..+..++|-|+++....|-..+-..+++++++++|+.|..|.++.++|+..-.
T Consensus 241 ~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~ 306 (316)
T KOG1441|consen 241 NSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYS 306 (316)
T ss_pred HHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHH
Confidence 558899999999999999999999999999999999999999999999999999999999998754
No 69
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.93 E-value=0.0035 Score=50.07 Aligned_cols=69 Identities=17% Similarity=0.283 Sum_probs=61.8
Q ss_pred hhhhhHHHHHHHHHHHHHHHHcCChhHHHHH-HhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcc
Q 019956 121 VYPIPAVLYLVKNLLQYYIFAYVDAPGYQIL-KNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTA 189 (333)
Q Consensus 121 ~~~ipally~~~n~l~~~al~~l~~~~~~vl-~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v 189 (333)
+|.+|-++|.....++|+.+...|.+...-+ +++.-++|++.++++.+|..+++.|+++.+.++|+.+.
T Consensus 43 ~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 43 KYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 4889999999999999999999998865555 69999999999988888888999999999999998764
No 70
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.85 E-value=0.0056 Score=47.27 Aligned_cols=58 Identities=14% Similarity=0.167 Sum_probs=36.1
Q ss_pred hhHHHHHHHHHHHHHHHHcCChhHH-HHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHH
Q 019956 124 IPAVLYLVKNLLQYYIFAYVDAPGY-QILKNLNIISTGVLYRIILKKKLSEIQWAAFIL 181 (333)
Q Consensus 124 ipally~~~n~l~~~al~~l~~~~~-~vl~~~k~l~talls~l~Lkekls~~qw~al~l 181 (333)
..-..|.++..+.-.+++++|.++. .+....-++.+++.+.+++||++|..||.++.+
T Consensus 34 ~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~l 92 (93)
T PF00893_consen 34 LAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGL 92 (93)
T ss_dssp HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheee
Confidence 3344688999999999999999855 556679999999999999999999999999876
No 71
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=96.79 E-value=0.026 Score=46.32 Aligned_cols=107 Identities=18% Similarity=0.088 Sum_probs=74.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCccccchHHHHHHHHHHH
Q 019956 204 QGWIMAIVMALLSGFAGVYTEAIMKKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVMNKGFFHGYSFITVLMILNHA 283 (333)
Q Consensus 204 ~G~~l~l~aa~~sala~v~~e~~lk~~~~~~~~~~n~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~a 283 (333)
.|+++++.++++.+.+.+..|+-+++.++.+... .. ....... . ....+.+..++..+
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~-------~~--~~~~~~~-~------------~p~~~i~lgl~~~~ 59 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAW-------DF--IAALLAF-G------------LALRAVLLGLAGYA 59 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchh-------HH--HHHHHHH-h------------ccHHHHHHHHHHHH
Confidence 3788999999999999999998887754311110 00 0000000 0 00125677777788
Q ss_pred HHhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHH--HcCCCcchhhhccc
Q 019956 284 LSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVF--LFGFHLSLAFFLGS 332 (333)
Q Consensus 284 ~gg~~v~~v~k~~~~i~k~~~~~~~~v~t~lls~~--lfge~lt~~~~lG~ 332 (333)
++-.+..+++|..|.....+..+...++..+.++. +|||++|...++|.
T Consensus 60 la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi 110 (129)
T PRK02971 60 LSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGV 110 (129)
T ss_pred HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHH
Confidence 88888899999888777776666666777777775 89999999999986
No 72
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=96.23 E-value=0.023 Score=53.41 Aligned_cols=108 Identities=13% Similarity=0.136 Sum_probs=78.8
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCccccchHHHHHHH
Q 019956 200 QTPLQGWIMAIVMALLSGFAGVYTEAIMKKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVMNKGFFHGYSFITVLMI 279 (333)
Q Consensus 200 ~~~~~G~~l~l~aa~~sala~v~~e~~lk~~~~~~~~~~n~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i 279 (333)
++..+|+.+.++++++.+.+..++||-.++.+..+.. +.+... .. -.++.+|...
T Consensus 3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~---------------------~~~~~~--~~--l~~~~W~~G~ 57 (300)
T PF05653_consen 3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLR---------------------AGSGGR--SY--LRRPLWWIGL 57 (300)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc---------------------ccchhh--HH--HhhHHHHHHH
Confidence 3567899999999999999999999987764421110 000000 00 0134455555
Q ss_pred HHHHHHhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 280 LNHALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 280 ~~~a~gg~~v~~v~k~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
+..++|.++-...+.+++..+..+...++++++.+++..+++|+++...++|.
T Consensus 58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~ 110 (300)
T PF05653_consen 58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGC 110 (300)
T ss_pred HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhH
Confidence 56666766666777889999999999999999999999999999999988885
No 73
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=96.12 E-value=0.13 Score=40.92 Aligned_cols=53 Identities=13% Similarity=0.078 Sum_probs=42.5
Q ss_pred HHHHHHhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 280 LNHALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 280 ~~~a~gg~~v~~v~k~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
+..++...+...++|+.+-...-...+.+++++.++|+++|||++|...++|.
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi 97 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGV 97 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 33445566777888887766666666688999999999999999999999885
No 74
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=95.94 E-value=0.33 Score=46.39 Aligned_cols=140 Identities=12% Similarity=-0.017 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhhhhhhh
Q 019956 46 RKSVVTLALTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVIVYPIP 125 (333)
Q Consensus 46 ~~~~~l~ll~l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ip 125 (333)
.+-+++++-.++++.+-++-+..- ++.++....-.-.+..++++.+.... -+.. +......+++....+..=
T Consensus 168 ~GDll~l~~a~lya~~nV~~E~~v----~~~~~~~~lg~~Glfg~ii~~iq~~i--le~~--~i~~~~w~~~~~~~~v~~ 239 (334)
T PF06027_consen 168 LGDLLALLGAILYAVSNVLEEKLV----KKAPRVEFLGMLGLFGFIISGIQLAI--LERS--GIESIHWTSQVIGLLVGY 239 (334)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhc----ccCCHHHHHHHHHHHHHHHHHHHHHh--eehh--hhhccCCChhhHHHHHHH
Confidence 344566666777888777766542 22345555555555566665544321 1111 111222222322211111
Q ss_pred HHHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccC
Q 019956 126 AVLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNS 193 (333)
Q Consensus 126 ally~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~ 193 (333)
++.-+....+.-+.++..+|..+++=.-+..+...++..++.|+++++..++|.++..+|..+....+
T Consensus 240 ~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~ 307 (334)
T PF06027_consen 240 ALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE 307 (334)
T ss_pred HHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence 11223333444566788888888888888899999999999999999999999999999999887653
No 75
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=95.77 E-value=0.17 Score=45.11 Aligned_cols=67 Identities=18% Similarity=0.135 Sum_probs=60.2
Q ss_pred hhhhHHHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhc
Q 019956 122 YPIPAVLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTT 188 (333)
Q Consensus 122 ~~ipally~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~ 188 (333)
.....+..+++..+..+.++|.|+.+......+.++++++++.++++++++..||.+..+.+.|+.+
T Consensus 155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 4445566788888999999999999999999999999999999999999999999999999988653
No 76
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=95.58 E-value=0.14 Score=40.57 Aligned_cols=54 Identities=20% Similarity=0.227 Sum_probs=43.2
Q ss_pred HHHHHHHHhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 278 MILNHALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 278 ~i~~~a~gg~~v~~v~k~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
.++....+..+..+..++.++ .........|+++.++|+++|+|+++...++|.
T Consensus 41 g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~ 94 (113)
T PF13536_consen 41 GLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAI 94 (113)
T ss_pred HHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 334444666777788899885 555777889999999999999999999998874
No 77
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.15 E-value=0.15 Score=47.84 Aligned_cols=64 Identities=23% Similarity=0.364 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhccccc
Q 019956 129 YLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLN 192 (333)
Q Consensus 129 y~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~ 192 (333)
+.+.+...|.|+.+-|++...-+..+.++..|+++..+||||++....+|.++.++|-.++...
T Consensus 74 m~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~h 137 (335)
T KOG2922|consen 74 MIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIH 137 (335)
T ss_pred HHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEe
Confidence 6789999999999999999999999999999999999999999999999999999997766543
No 78
>PRK13499 rhamnose-proton symporter; Provisional
Probab=94.59 E-value=1.6 Score=41.90 Aligned_cols=75 Identities=9% Similarity=0.158 Sum_probs=56.2
Q ss_pred chhhhhhhhhHHHHHHHHHHHHHHHHcCChhHHHH---HH-hhHHHHHHHHHHHHhcCccC------HHHHHHHHHHHhh
Q 019956 116 LDEVIVYPIPAVLYLVKNLLQYYIFAYVDAPGYQI---LK-NLNIISTGVLYRIILKKKLS------EIQWAAFILLCCG 185 (333)
Q Consensus 116 ~~~~~~~~ipally~~~n~l~~~al~~l~~~~~~v---l~-~~k~l~talls~l~Lkekls------~~qw~al~ll~~G 185 (333)
+++...-.+.+++..++|.+.+++-+.++.+...+ +. |+.+++.++-.. +|||+=+ +.-+.++++..+|
T Consensus 257 ~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g 335 (345)
T PRK13499 257 ITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILA 335 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHH
Confidence 56767778999999999999999999885443333 55 777788877777 5998876 4446677777777
Q ss_pred hhcccc
Q 019956 186 CTTAQL 191 (333)
Q Consensus 186 v~~v~~ 191 (333)
..++..
T Consensus 336 ~~lig~ 341 (345)
T PRK13499 336 ANIVGL 341 (345)
T ss_pred HHHHhh
Confidence 776654
No 79
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=94.36 E-value=2.5 Score=34.96 Aligned_cols=121 Identities=13% Similarity=-0.000 Sum_probs=70.4
Q ss_pred HHHHHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhhhhhhhHHHHHHHH
Q 019956 54 LTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVIVYPIPAVLYLVKN 133 (333)
Q Consensus 54 l~l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ipally~~~n 133 (333)
..+|...|.-+.+.. +.++..+.+++....+-+.+...+. ++. +..+.+ +..+.+...+++-...-
T Consensus 13 i~~q~~~N~~L~~~~----gs~~~as~i~~~~G~i~~~i~~~~~-----~~~--~~~~~~---~~p~w~~lGG~lG~~~V 78 (138)
T PF04657_consen 13 IALQAAFNGQLGKAL----GSPLVASFISFGVGFILLLIILLIT-----GRP--SLASLS---SVPWWAYLGGLLGVFFV 78 (138)
T ss_pred HHHHHHHHHHHHHHh----CccHHHHHHHHHHHHHHHHHHHHHh-----ccc--ccchhc---cCChHHhccHHHHHHHH
Confidence 456666666664443 3344555555555444433333322 221 111111 11223344666666666
Q ss_pred HHHHHHHHcCChhHHHHHHhhHHHHHHHH-HHH----HhcCccCHHHHHHHHHHHhhhhc
Q 019956 134 LLQYYIFAYVDAPGYQILKNLNIISTGVL-YRI----ILKKKLSEIQWAAFILLCCGCTT 188 (333)
Q Consensus 134 ~l~~~al~~l~~~~~~vl~~~k~l~tall-s~l----~Lkekls~~qw~al~ll~~Gv~~ 188 (333)
.+..+....+.++...++.-+--+..+++ =.+ .-|+++++.|.+++.+..+|+.+
T Consensus 79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 67777778899887776665544444444 443 46799999999999999999863
No 80
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=94.04 E-value=0.091 Score=47.18 Aligned_cols=68 Identities=13% Similarity=0.173 Sum_probs=59.4
Q ss_pred hhHHHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccc
Q 019956 124 IPAVLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQL 191 (333)
Q Consensus 124 ipally~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~ 191 (333)
..++.-.+...+.|.-..+..|-+-+++..++-.+|-+.|+++++..++.+||++-.+.|.|...=..
T Consensus 246 l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~ 313 (337)
T KOG1580|consen 246 LLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVV 313 (337)
T ss_pred HHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhh
Confidence 34444577888889999999999999999999999999999999999999999999999998766443
No 81
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=93.88 E-value=0.0043 Score=55.84 Aligned_cols=247 Identities=11% Similarity=0.114 Sum_probs=142.2
Q ss_pred HHHHHHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhhhhhhhHHHHHHH
Q 019956 53 ALTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVIVYPIPAVLYLVK 132 (333)
Q Consensus 53 ll~l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ipally~~~ 132 (333)
+=.+.|++-+++ ....|+.+++..-- .-+-++++++... +-..+ . .+++....-.+.+++....
T Consensus 9 ~P~l~WGsip~v---~~k~GG~p~qQ~lG---tT~GALifaiiv~---~~~~p-----~--~T~~~~iv~~isG~~Ws~G 72 (288)
T COG4975 9 LPALGWGSIPLV---ANKFGGKPYQQTLG---TTLGALIFAIIVF---LFVSP-----E--LTLTIFIVGFISGAFWSFG 72 (288)
T ss_pred HHHHHhccccee---eeecCCChhHhhhh---ccHHHHHHHHHHh---eeecC-----c--cchhhHHHHHHhhhHhhhh
Confidence 346789998887 44444555554433 3344555665555 22111 1 2356666777888889999
Q ss_pred HHHHHHHHHcCChhHHHHH-HhhHHHHHHHHHHHHhcCccCHHHH----HHHHHHHhhhhcccccCCCCc---cccchhh
Q 019956 133 NLLQYYIFAYVDAPGYQIL-KNLNIISTGVLYRIILKKKLSEIQW----AAFILLCCGCTTAQLNSNSDR---VLQTPLQ 204 (333)
Q Consensus 133 n~l~~~al~~l~~~~~~vl-~~~k~l~talls~l~Lkekls~~qw----~al~ll~~Gv~~v~~~~~~~~---~~~~~~~ 204 (333)
...+|-+.+++..+...=+ ..++.+-+.+++++.++|--+..|. .|+++..+|+.+...++..++ ..++.-.
T Consensus 73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~n~kk 152 (288)
T COG4975 73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPSNLKK 152 (288)
T ss_pred hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChHhhhh
Confidence 9999999999888766544 4677889999999999998888875 578888889888766543222 1234556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCccccchHHHHHHHH---H
Q 019956 205 GWIMAIVMALLSGFAGVYTEAIMKKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVMNKGFFHGYSFITVLMIL---N 281 (333)
Q Consensus 205 G~~l~l~aa~~sala~v~~e~~lk~~~~~~~~~~n~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~---~ 281 (333)
|+...+.+.+..-.+.|..+... -..-+-+.-|.+-|.+.++.++. ...+.. .+..+|.-++ .
T Consensus 153 gi~~L~iSt~GYv~yvvl~~~f~-v~g~saiLPqAiGMv~~ali~~~-----~~~~~~--------~~K~t~~nii~G~~ 218 (288)
T COG4975 153 GIVILLISTLGYVGYVVLFQLFD-VDGLSAILPQAIGMVIGALILGF-----FKMEKR--------FNKYTWLNIIPGLI 218 (288)
T ss_pred heeeeeeeccceeeeEeeecccc-ccchhhhhHHHHHHHHHHHHHhh-----cccccc--------hHHHHHHHHhhHHH
Confidence 88887778877777777665432 11111234333333332222221 111111 1223333332 3
Q ss_pred HHHHhHHHHHHhhhhhhHHHHHH-HHHHHHHHHHHHHHHcCCCcchhhhc
Q 019956 282 HALSGIAVSMVMKYADNIVKVYS-TSVAMLLTAVVSVFLFGFHLSLAFFL 330 (333)
Q Consensus 282 ~a~gg~~v~~v~k~~~~i~k~~~-~~~~~v~t~lls~~lfge~lt~~~~l 330 (333)
-++|.+..-+.-+..+ +...|. +....+++++-++++++|+=|...+.
T Consensus 219 Wa~GNl~ml~a~~~~G-vAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~ 267 (288)
T COG4975 219 WAIGNLFMLLAAQKVG-VATSFSLSQLGVIISTIGGILFLGEKKTKKEMV 267 (288)
T ss_pred HHhhHHHHHHhhhhhc-eeeeeeHhhheeeeeecceEEEEeccCchhhhh
Confidence 3444432221111111 111111 23445888888899999987765543
No 82
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=93.83 E-value=3.5 Score=38.35 Aligned_cols=129 Identities=14% Similarity=0.064 Sum_probs=89.9
Q ss_pred HHHHHHhHHHHHHHHhhccCCccchHHHHHHHHHHHH-HHHHHHHHHHHHhhcCCCCCCcccccchhhhhhhhhHHHHHH
Q 019956 53 ALTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLK-CALSLAALARIWNHEGVTDDNRLSTTLDEVIVYPIPAVLYLV 131 (333)
Q Consensus 53 ll~l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~k-l~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ipally~~ 131 (333)
.+++-++.+.++-|..+.+ +.+ -++-|.+- +..++..+. +-+... .--...+......+...|..-++
T Consensus 155 ~la~sf~~Ygl~RK~~~v~------a~~-g~~lE~l~l~p~al~yl~--~l~~~~--~~~~~~~~~~~~LLv~aG~vTav 223 (293)
T COG2962 155 ALALSFGLYGLLRKKLKVD------ALT-GLTLETLLLLPVALIYLL--FLADSG--QFLQQNANSLWLLLVLAGLVTAV 223 (293)
T ss_pred HHHHHHHHHHHHHHhcCCc------hHH-hHHHHHHHHhHHHHHHHH--HHhcCc--hhhhcCCchHHHHHHHhhHHHHH
Confidence 4566677777776665332 333 34445443 444555442 222211 00011234555666677777777
Q ss_pred HHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhccccc
Q 019956 132 KNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLN 192 (333)
Q Consensus 132 ~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~ 192 (333)
--.++-.|-+.+|-++.-++....|...-+++++++||+++..|+.+.+..-+|+++...+
T Consensus 224 pL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d 284 (293)
T COG2962 224 PLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSID 284 (293)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 8888888999999999999999999999999999999999999999999999998877644
No 83
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=93.78 E-value=0.63 Score=43.42 Aligned_cols=108 Identities=18% Similarity=0.229 Sum_probs=79.2
Q ss_pred CccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC------cccccchhhhhhhhhHHHHHHHHHHHHHHHHcCChh
Q 019956 73 KYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDN------RLSTTLDEVIVYPIPAVLYLVKNLLQYYIFAYVDAP 146 (333)
Q Consensus 73 ~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~------~~~~~~~~~~~~~ipally~~~n~l~~~al~~l~~~ 146 (333)
++..++...++-..+...+.+..-+ . .++. ..+ +.+.-++|.++|...+ ++..++.|.-++...+-
T Consensus 197 ~~k~s~~~mM~~vNLf~~i~~~~~l---i-~qg~-~~~av~F~~~hp~~~~Di~l~s~~g---avGQ~FI~~TI~~FGsl 268 (327)
T KOG1581|consen 197 KYKVSSLHMMFGVNLFSAILNGTYL---I-LQGH-LLPAVSFIKEHPDVAFDILLYSTCG---AVGQLFIFYTIERFGSL 268 (327)
T ss_pred cCCccHhHHHHHHHHHHHHHHHHhh---h-cCCC-CchHHHHHHcChhHHHHHHHHHHhh---hhhhheehhhHhhcccH
Confidence 5556677777777777666655443 1 2221 111 1112235655555444 78888888999999999
Q ss_pred HHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhc
Q 019956 147 GYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTT 188 (333)
Q Consensus 147 ~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~ 188 (333)
++..+.-++=++.-+++.++.+++++..||.++.+.|.|...
T Consensus 269 t~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 269 TFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 999999999999999999999999999999999988888765
No 84
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=91.83 E-value=0.018 Score=51.87 Aligned_cols=112 Identities=14% Similarity=0.115 Sum_probs=80.3
Q ss_pred HHHHHHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhhhhhhhHHHHHHH
Q 019956 53 ALTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVIVYPIPAVLYLVK 132 (333)
Q Consensus 53 ll~l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ipally~~~ 132 (333)
.-++.+..+.++.+.-..+|- + .++-..+.++++...+- ..++ ++ +.-|+.++-.+|+++..+.
T Consensus 159 iSt~GYv~yvvl~~~f~v~g~------s-aiLPqAiGMv~~ali~~---~~~~--~~----~~~K~t~~nii~G~~Wa~G 222 (288)
T COG4975 159 ISTLGYVGYVVLFQLFDVDGL------S-AILPQAIGMVIGALILG---FFKM--EK----RFNKYTWLNIIPGLIWAIG 222 (288)
T ss_pred eeccceeeeEeeeccccccch------h-hhhHHHHHHHHHHHHHh---hccc--cc----chHHHHHHHHhhHHHHHhh
Confidence 345566666666555443332 2 23334456666655552 2221 11 1135566678999999999
Q ss_pred HHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHH
Q 019956 133 NLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFI 180 (333)
Q Consensus 133 n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ 180 (333)
|...+.+.+....++.--++|+-++..++-..++||||=++++|..+.
T Consensus 223 Nl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~ 270 (288)
T COG4975 223 NLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVI 270 (288)
T ss_pred HHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhh
Confidence 999999999999999999999999999999999999999999987654
No 85
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=91.63 E-value=1.6 Score=33.47 Aligned_cols=52 Identities=31% Similarity=0.327 Sum_probs=26.1
Q ss_pred HHHHHhHHHHHHhhhhhhHHHHH-HHHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 281 NHALSGIAVSMVMKYADNIVKVY-STSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 281 ~~a~gg~~v~~v~k~~~~i~k~~-~~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
..++.-.+.+..+|+.+-.+.-. .+..+.+.++++|.++|||++|...++|.
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi 90 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGI 90 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhhe
Confidence 44445566777787755433322 24577899999999999999999999885
No 86
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=90.71 E-value=1.3 Score=35.23 Aligned_cols=55 Identities=22% Similarity=0.283 Sum_probs=39.3
Q ss_pred HHHHHHHHHhHHHHHHhhhhhhHHHHHH--HHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 277 LMILNHALSGIAVSMVMKYADNIVKVYS--TSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 277 ~~i~~~a~gg~~v~~v~k~~~~i~k~~~--~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
..++.-++.-.+.+.++|+.+ +-..++ +..+.+.++++|+++|||++|+..++|.
T Consensus 35 ~~~~~~~~sf~~l~~al~~ip-l~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi 91 (110)
T PRK09541 35 GTIICYCASFWLLAQTLAYIP-TGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGM 91 (110)
T ss_pred HHHHHHHHHHHHHHHHHhhCC-chhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 344444555556677777744 333444 4467899999999999999999999875
No 87
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=89.63 E-value=1.7 Score=35.23 Aligned_cols=55 Identities=31% Similarity=0.372 Sum_probs=40.0
Q ss_pred HHHHHHHHHhHHHHHHhhhhhhHHHHHH--HHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 277 LMILNHALSGIAVSMVMKYADNIVKVYS--TSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 277 ~~i~~~a~gg~~v~~v~k~~~~i~k~~~--~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
..++.-++.-.+.+.++|+.+- -..++ +..+.+.++++|+++|||++|+..++|.
T Consensus 35 ~~i~~~~~sf~~ls~al~~lpl-siAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi 91 (120)
T PRK10452 35 LMLVMISLSYIFLSFAVKKIAL-GVAYALWEGIGILFITLFSVLLFDESLSLMKIAGL 91 (120)
T ss_pred HHHHHHHHHHHHHHHHHhhCCc-hhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 3444555566677778877553 33333 4577899999999999999999998875
No 88
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=88.58 E-value=19 Score=32.76 Aligned_cols=128 Identities=16% Similarity=0.105 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHhHHHHHH-HHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhhhhhh
Q 019956 46 RKSVVTLALTVLTSSQAILI-VWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVIVYPI 124 (333)
Q Consensus 46 ~~~~~l~ll~l~~~~~~ll~-~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i 124 (333)
.+.+..++.++..+.+.+.. |.-|+.+ . +...-+.--.+...++.+.... .++.....+......|... ..+
T Consensus 114 ~G~~~vl~~~~~S~~agVy~E~~lK~~~-~--s~~~~N~qL~~~gi~~~~~~~~--~~~~~~~~~~g~f~G~~~~--~~~ 186 (244)
T PF04142_consen 114 LGLLAVLAAAFLSGFAGVYFEKLLKRSN-V--SLWIQNMQLYLFGILFNLLALL--LSDGSAISESGFFHGYSWW--VWI 186 (244)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcccc-h--hHHHHHHHHHHHHHHHHHHHHh--cccccccccCCchhhcchH--HHH
Confidence 45555555666777777776 4444332 1 2222222222333333333331 2211110111111223222 234
Q ss_pred hHHHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHH
Q 019956 125 PAVLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFI 180 (333)
Q Consensus 125 pally~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ 180 (333)
+-++.++...+.-..++|.|.-.=.......++.+++++.++++.++|....+|..
T Consensus 187 ~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~ 242 (244)
T PF04142_consen 187 VIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAA 242 (244)
T ss_pred HHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhhee
Confidence 55567888888888999999999999999999999999999999999987766543
No 89
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=87.83 E-value=4.9 Score=36.13 Aligned_cols=132 Identities=8% Similarity=0.070 Sum_probs=88.3
Q ss_pred HHHHHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccc--cchhhhhhhhhHHHHHH
Q 019956 54 LTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLST--TLDEVIVYPIPAVLYLV 131 (333)
Q Consensus 54 l~l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~ipally~~ 131 (333)
=++-.+...+.+|-- -.-..+.....++-..++.+.+.+.+-+ .-++. ++. .+.. ....+..+.+.+++-..
T Consensus 163 NclssaafVL~mrkr--i~ltNf~d~dtmfYnNllslPiL~~~s~--~~edw-s~~-n~annl~~d~l~am~ISgl~svg 236 (309)
T COG5070 163 NCLSSAAFVLIMRKR--IKLTNFKDFDTMFYNNLLSLPILLSFSF--LFEDW-SPG-NLANNLSVDSLMAMFISGLCSVG 236 (309)
T ss_pred hhHhHHHHHHHHHHh--hcccccchhhHHHHhhhHHHHHHHHHHH--HhccC-Ccc-hhhcCCChHHHHHHHHHHHHHhh
Confidence 344444445555431 1122333455577777776665444432 12222 111 1111 12445678888888777
Q ss_pred HHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccc
Q 019956 132 KNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQL 191 (333)
Q Consensus 132 ~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~ 191 (333)
-..+.-|-++-++..+++++..++-+..++-..+++++..+.....+++++++..++-..
T Consensus 237 iSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYav 296 (309)
T COG5070 237 ISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAV 296 (309)
T ss_pred hhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHH
Confidence 778888888999999999999999999999999999999999999999999877666443
No 90
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=87.30 E-value=13 Score=29.48 Aligned_cols=53 Identities=21% Similarity=0.217 Sum_probs=38.7
Q ss_pred HHHHHHHhHHHHHHhhhhhhHHHHHH--HHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 279 ILNHALSGIAVSMVMKYADNIVKVYS--TSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 279 i~~~a~gg~~v~~v~k~~~~i~k~~~--~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
+..-++.-.+.+.++|+.+ +-..++ +-.+.+.++++|+++|||++|+..++|.
T Consensus 42 ~~~~~~sf~~Ls~al~~lp-vgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi 96 (109)
T PRK10650 42 LAAVLAAFSALSQAVKGID-LSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGL 96 (109)
T ss_pred HHHHHHHHHHHHHHHhhCc-hHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHH
Confidence 3445555667778887644 333344 4566799999999999999999998874
No 91
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=86.82 E-value=3.1 Score=32.84 Aligned_cols=56 Identities=36% Similarity=0.470 Sum_probs=39.9
Q ss_pred HHHHHHHHHHhHHHHHHhhhhhhHHHHHH--HHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 276 VLMILNHALSGIAVSMVMKYADNIVKVYS--TSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 276 ~~~i~~~a~gg~~v~~v~k~~~~i~k~~~--~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
.+.++...+.-.+.+..+|+.+ +-..++ +-..++.+++.|+++|||+++...++|.
T Consensus 34 il~~v~~~~sf~~Ls~alk~ip-vgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl 91 (106)
T COG2076 34 ILTIVGYGLSFYLLSLALKTIP-LGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGL 91 (106)
T ss_pred HHHHHHHHHHHHHHHHHHhhCc-hHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHH
Confidence 3344445555566778888754 333333 5577899999999999999999988774
No 92
>PRK11431 multidrug efflux system protein; Provisional
Probab=85.81 E-value=4.3 Score=32.01 Aligned_cols=53 Identities=21% Similarity=0.229 Sum_probs=37.5
Q ss_pred HHHHHHHhHHHHHHhhhhhhHHHHHH--HHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 279 ILNHALSGIAVSMVMKYADNIVKVYS--TSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 279 i~~~a~gg~~v~~v~k~~~~i~k~~~--~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
++.-++.-.+.+..+|+.+ +-..++ +-.+.+.++++|+++|||++|+..++|.
T Consensus 36 i~~~~~sf~~Ls~al~~ip-~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi 90 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLP-VGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSL 90 (105)
T ss_pred HHHHHHHHHHHHHHHhhCC-cHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 3344555556677777644 222333 5567899999999999999999998874
No 93
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=85.24 E-value=8.8 Score=30.22 Aligned_cols=67 Identities=16% Similarity=0.211 Sum_probs=51.5
Q ss_pred hhhhhHHHHHHHHHHHHHHHHcCChh-HHHHHHhhHHHHHHHHHHHHhcCccC-HHHHHHHHHHHhhhhc
Q 019956 121 VYPIPAVLYLVKNLLQYYIFAYVDAP-GYQILKNLNIISTGVLYRIILKKKLS-EIQWAAFILLCCGCTT 188 (333)
Q Consensus 121 ~~~ipally~~~n~l~~~al~~l~~~-~~~vl~~~k~l~talls~l~Lkekls-~~qw~al~ll~~Gv~~ 188 (333)
.|.+|-+++-..+.++|.-++..|-+ ..-+.+++...+|+++...+ ||+.. .+-.++..+.++|..+
T Consensus 54 ~Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~L-GE~~~g~~a~lGt~liv~Gi~L 122 (125)
T KOG4831|consen 54 EYLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKAL-GEETQGGLALLGTSLIVFGIWL 122 (125)
T ss_pred HHHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHh-ccccccceeehhhhHHhhhhhh
Confidence 48899999999999999999999877 45567788999999999875 65554 4455666666666544
No 94
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=83.46 E-value=2.8 Score=38.60 Aligned_cols=125 Identities=8% Similarity=0.068 Sum_probs=84.3
Q ss_pred HHHHHHHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccchhhhhhhhhHHHHHH
Q 019956 52 LALTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEGVTDDNRLSTTLDEVIVYPIPAVLYLV 131 (333)
Q Consensus 52 ~ll~l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ipally~~ 131 (333)
+.-++..++-.++.|+--++-++-.+.+-...+.-+..++.+..+- .-.+...+|+.+.+...|+.-++
T Consensus 197 i~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~~ig-----------~~~lP~cgkdr~l~~~lGvfgfi 265 (346)
T KOG4510|consen 197 ISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVVSLIGCASIG-----------AVQLPHCGKDRWLFVNLGVFGFI 265 (346)
T ss_pred HHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHHHHHHHhhcc-----------ceecCccccceEEEEEehhhhhH
Confidence 3445556666667777633333333333333333333333322221 11222345666777888888899
Q ss_pred HHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhh
Q 019956 132 KNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCT 187 (333)
Q Consensus 132 ~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~ 187 (333)
...+...++|-=-++-.++...+.+++.-+.=.+++|+--+++.|.+.++......
T Consensus 266 gQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v 321 (346)
T KOG4510|consen 266 GQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTV 321 (346)
T ss_pred HHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHH
Confidence 99999999999999999999999999999999999999999999988765544433
No 95
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=82.63 E-value=28 Score=29.29 Aligned_cols=71 Identities=14% Similarity=-0.008 Sum_probs=41.9
Q ss_pred hhhhHHHHHHHHHHHHHHHHcCChhHHHHH-HhhHHHHHHHHHHHHh----cCccCHHHHHHHHHHHhhhhccccc
Q 019956 122 YPIPAVLYLVKNLLQYYIFAYVDAPGYQIL-KNLNIISTGVLYRIIL----KKKLSEIQWAAFILLCCGCTTAQLN 192 (333)
Q Consensus 122 ~~ipally~~~n~l~~~al~~l~~~~~~vl-~~~k~l~talls~l~L----kekls~~qw~al~ll~~Gv~~v~~~ 192 (333)
..+.+++-...-...-.....+-+++.+.+ ..-+.+.-.++=.+=+ +++++..++.++++..+|+.+++..
T Consensus 72 ~~~GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~ 147 (150)
T COG3238 72 AWIGGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF 147 (150)
T ss_pred HHHccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence 444454433333333344456666654443 3444454444443333 4999999999999999997766543
No 96
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=81.32 E-value=29 Score=28.60 Aligned_cols=122 Identities=13% Similarity=0.167 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCccccchHHHHHHHHHHHHH
Q 019956 206 WIMAIVMALLSGFAGVYTEAIMKKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVMNKGFFHGYSFITVLMILNHALS 285 (333)
Q Consensus 206 ~~l~l~aa~~sala~v~~e~~lk~~~~~~~~~~n~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~a~g 285 (333)
.++.+.+-.+-++.+..+-++-|+.. +++..++.-...|.+...+..+..+..... -..+.++|.|..-+..++.
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~g--s~~~as~i~~~~G~i~~~i~~~~~~~~~~~---~~~~~p~w~~lGG~lG~~~ 77 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALG--SPLVASFISFGVGFILLLIILLITGRPSLA---SLSSVPWWAYLGGLLGVFF 77 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC--ccHHHHHHHHHHHHHHHHHHHHHhcccccc---hhccCChHHhccHHHHHHH
Confidence 45667777788888888888877754 356555665666666666555443322111 1234467777665555555
Q ss_pred hHHHHHHhhhhhhHHHHHH-HHHHHHHHHHHHHH-Hc---CCCcchhhhccc
Q 019956 286 GIAVSMVMKYADNIVKVYS-TSVAMLLTAVVSVF-LF---GFHLSLAFFLGS 332 (333)
Q Consensus 286 g~~v~~v~k~~~~i~k~~~-~~~~~v~t~lls~~-lf---ge~lt~~~~lG~ 332 (333)
-....+.+...+....... ..-.++.+.++..+ +| .++++...++|.
T Consensus 78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~ 129 (138)
T PF04657_consen 78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGL 129 (138)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHH
Confidence 5555566665554444333 23345667777765 44 355777766664
No 97
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=81.11 E-value=2 Score=40.45 Aligned_cols=107 Identities=15% Similarity=0.170 Sum_probs=79.0
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCccccchHHHHHHHH
Q 019956 201 TPLQGWIMAIVMALLSGFAGVYTEAIMKKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVMNKGFFHGYSFITVLMIL 280 (333)
Q Consensus 201 ~~~~G~~l~l~aa~~sala~v~~e~~lk~~~~~~~~~~n~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~ 280 (333)
+..+|.++.+.+++.-|..-+..||-+++... .-.++++ .|+-.-..++.|..++
T Consensus 18 d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~---------------------~~~ra~~----gg~~yl~~~~Ww~G~l 72 (335)
T KOG2922|consen 18 DNIIGLVLAISSSIFIGSSFILKKKGLKRAGA---------------------SGLRAGE----GGYGYLKEPLWWAGML 72 (335)
T ss_pred CceeeeeehhhccEEEeeehhhhHHHHHHHhh---------------------hcccccC----CCcchhhhHHHHHHHH
Confidence 45678888888888777777777766655221 0012111 1111112467888899
Q ss_pred HHHHHhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 281 NHALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 281 ~~a~gg~~v~~v~k~~~~i~k~~~~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
..++|-+.-...+-++.+++..+..+++++.+++++..+++|+++..-.+|.
T Consensus 73 tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc 124 (335)
T KOG2922|consen 73 TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGC 124 (335)
T ss_pred HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhhe
Confidence 9999998888888889999999999999999999999999999998877774
No 98
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=80.97 E-value=45 Score=32.36 Aligned_cols=145 Identities=12% Similarity=0.042 Sum_probs=89.5
Q ss_pred hHHHHHHHHHHHHHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHH-HH-HhhcCCCCCCcccccchhhhhh
Q 019956 45 KRKSVVTLALTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALA-RI-WNHEGVTDDNRLSTTLDEVIVY 122 (333)
Q Consensus 45 ~~~~~~l~ll~l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~-~~-~~~~~~~~~~~~~~~~~~~~~~ 122 (333)
.++-++-.+-++.++.+..+.|.--.+.+.+.+.-..-=...+.-+++..+.+. .. ..++. -.++... .....
T Consensus 246 llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~----F~lP~~~-q~~~v 320 (416)
T KOG2765|consen 246 LLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEER----FELPSST-QFSLV 320 (416)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCc----ccCCCCc-eeEee
Confidence 345556666688899998888764333323333222111122333333322111 11 11111 1121112 22223
Q ss_pred hhhHHH-HHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccCC
Q 019956 123 PIPAVL-YLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNSN 194 (333)
Q Consensus 123 ~ipall-y~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~~ 194 (333)
.+-+++ -+++..+.-.|.-..++-+..+-....+....+.=.++-+++.|+.+.+|-+..++|..++..+++
T Consensus 321 v~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~ 393 (416)
T KOG2765|consen 321 VFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE 393 (416)
T ss_pred eHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence 333444 457999999999999999999999999988888888888999999999999999999888876543
No 99
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=78.40 E-value=12 Score=35.20 Aligned_cols=142 Identities=11% Similarity=-0.037 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCCcccccchhhhhhhhh
Q 019956 47 KSVVTLALTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALARIWNHEG-VTDDNRLSTTLDEVIVYPIP 125 (333)
Q Consensus 47 ~~~~l~ll~l~~~~~~ll~~~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~ip 125 (333)
+|.....-++..++..+.+|.+-+.+ +.+....++-..+..+.......+. +.+-. .........+..-+..+.+.
T Consensus 158 gY~w~~~n~~~~a~~~v~~kk~vd~~--~l~~~~lv~yNnl~~L~~l~~~~~~-~ge~~~l~~~~~~~~~~~~~~~~~lS 234 (314)
T KOG1444|consen 158 GYSWALANCLTTAAFVVYVKKSVDSA--NLNKFGLVFYNNLLSLPPLLILSFI-TGELDALSLNFDNWSDSSVLVVMLLS 234 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhccc--cccceeEEeehhHHHHHHHHHHHHH-hcchHHHHhhcccccchhHHHHHHHH
Confidence 45555555666666666666543322 1233334444444444443333221 11100 00000001112334556777
Q ss_pred HHHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccc
Q 019956 126 AVLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQL 191 (333)
Q Consensus 126 ally~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~ 191 (333)
+++-++-|...++-.+..++.+++++.-...+.|++-..++.+++.++....|+.+.++|-.+-+.
T Consensus 235 cv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~ 300 (314)
T KOG1444|consen 235 CVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSY 300 (314)
T ss_pred HHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhh
Confidence 777888999999999999999999999888888999889999999999999999999999877654
No 100
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=77.75 E-value=20 Score=28.65 Aligned_cols=99 Identities=16% Similarity=0.171 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCccccchHHHHHHHHHHHHHhHHHH
Q 019956 211 VMALLSGFAGVYTEAIMKKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVMNKGFFHGYSFITVLMILNHALSGIAVS 290 (333)
Q Consensus 211 ~aa~~sala~v~~e~~lk~~~~~~~~~~n~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~a~gg~~v~ 290 (333)
+-+++||+.+.+.||-.+..+...--.| ... .... ++. ++.-+...+.+..|.+...
T Consensus 3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~~~-~~~---~~~~-----Ll~--------------n~~y~ipf~lNq~GSv~f~ 59 (113)
T PF10639_consen 3 LVGILWGCTNPFIKRGSSGLEKVKASLQ-LLQ---EIKF-----LLL--------------NPKYIIPFLLNQSGSVLFF 59 (113)
T ss_pred eehHHhcCchHHHHHHHhhcCCccchHH-HHH---HHHH-----HHH--------------hHHHHHHHHHHHHHHHHHH
Confidence 3467899999999998877442111011 100 0000 111 2223344555666677677
Q ss_pred HHhhhhhhHHHHHH-HHHHHHHHHHHHHHHcCCCcchhhhccc
Q 019956 291 MVMKYADNIVKVYS-TSVAMLLTAVVSVFLFGFHLSLAFFLGS 332 (333)
Q Consensus 291 ~v~k~~~~i~k~~~-~~~~~v~t~lls~~lfge~lt~~~~lG~ 332 (333)
+.+..+|=....+. .+.+.++|.+.++++.+|..+...++|.
T Consensus 60 ~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~ 102 (113)
T PF10639_consen 60 LLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGM 102 (113)
T ss_pred HHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHH
Confidence 77877776666555 5889999999999988888888888874
No 101
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=76.40 E-value=9.8 Score=35.33 Aligned_cols=116 Identities=16% Similarity=0.216 Sum_probs=70.2
Q ss_pred HhhccCCccchHHHHHHHHHHHHHHHHHHHHH---HHHhhcCCCCCCcccccchhhhhhhhhHHH-HHHHHHHHHH-HHH
Q 019956 67 WSKRAGKYEYSVTTANFLVETLKCALSLAALA---RIWNHEGVTDDNRLSTTLDEVIVYPIPAVL-YLVKNLLQYY-IFA 141 (333)
Q Consensus 67 ~s~~~~~~~~~~~~~v~l~e~~kl~i~l~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~ipall-y~~~n~l~~~-al~ 141 (333)
.+|+.|+ ++-...|-+-++.+-.-+++.- -+|+.-..++ +.. -...-..+|... |.+.|.+..+ -.+
T Consensus 186 ~Y~kyGK---h~~EalFytH~LsLP~Flf~~~div~~~~~~~~se--~~~---~p~~g~~vP~~~~yLl~n~L~Qy~Cik 257 (330)
T KOG1583|consen 186 TYQKYGK---HWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSE--SYL---IPLLGFKVPSMWVYLLFNVLTQYFCIK 257 (330)
T ss_pred HHHHhcC---ChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCc--cee---ccccCccccHHHHHHHHHHHHHHHHHH
Confidence 4555666 4788888888875544333220 0111110000 000 001112255554 6666665443 222
Q ss_pred -------cCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhccc
Q 019956 142 -------YVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQ 190 (333)
Q Consensus 142 -------~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~ 190 (333)
..++-|.++...++=.+.-++|...++..+++..|+|..+.|+|.++..
T Consensus 258 gVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa 313 (330)
T KOG1583|consen 258 GVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA 313 (330)
T ss_pred hhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 2444566667777888888999999999999999999999999998765
No 102
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=57.58 E-value=3.4 Score=38.21 Aligned_cols=95 Identities=14% Similarity=0.200 Sum_probs=0.0
Q ss_pred HHHHHcCChhHHHHHHhhHHHHHHHHH-HHHhcCc-cCHHHHHHHHHHHhhhhcccccCCCCccccchhhHHHHHHHHHH
Q 019956 137 YYIFAYVDAPGYQILKNLNIISTGVLY-RIILKKK-LSEIQWAAFILLCCGCTTAQLNSNSDRVLQTPLQGWIMAIVMAL 214 (333)
Q Consensus 137 ~~al~~l~~~~~~vl~~~k~l~talls-~l~Lkek-ls~~qw~al~ll~~Gv~~v~~~~~~~~~~~~~~~G~~l~l~aa~ 214 (333)
|+.++-.+-+...++++..++.+-++- .+++||| +-+.-.+|+++.++-.++..+-.-. .+..+.|+++.+++++
T Consensus 41 ~iimsd~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L~tLt---GQ~LF~Gi~~l~l~~l 117 (381)
T PF05297_consen 41 FIIMSDLTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWTLT---GQTLFVGIVILFLCCL 117 (381)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHH
Confidence 444555555556666666655554443 4445555 4566777777777666555432111 1345667776666555
Q ss_pred HHHHHHHHHHHHhhcCCCCchH
Q 019956 215 LSGFAGVYTEAIMKKRPSRNIN 236 (333)
Q Consensus 215 ~sala~v~~e~~lk~~~~~~~~ 236 (333)
+.=..=.|.+ +++++.. ++|
T Consensus 118 LaL~vW~Ym~-lLr~~GA-s~W 137 (381)
T PF05297_consen 118 LALGVWFYMW-LLRELGA-SFW 137 (381)
T ss_dssp ----------------------
T ss_pred HHHHHHHHHH-HHHHhhh-HHH
Confidence 4333334544 6677665 555
No 103
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=53.97 E-value=33 Score=32.35 Aligned_cols=74 Identities=16% Similarity=0.267 Sum_probs=64.8
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhccc
Q 019956 117 DEVIVYPIPAVLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQ 190 (333)
Q Consensus 117 ~~~~~~~ipally~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~ 190 (333)
+..-..+.++++-+.--...|.-+..++.-+.++..-.|-+.|-+++..++++++|...|.++.+...|+..-.
T Consensus 241 rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~ 314 (349)
T KOG1443|consen 241 RVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHR 314 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhc
Confidence 44556777787777777778888889999999999999999999999999999999999999999999998763
No 104
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=53.77 E-value=88 Score=24.37 Aligned_cols=32 Identities=19% Similarity=-0.009 Sum_probs=27.2
Q ss_pred HHHHHHHHHhcCccCHHHHHHHHHHHhhhhcc
Q 019956 158 STGVLYRIILKKKLSEIQWAAFILLCCGCTTA 189 (333)
Q Consensus 158 ~talls~l~Lkekls~~qw~al~ll~~Gv~~v 189 (333)
.-..+|++.|||.+.+.+|.|-.+...|+..+
T Consensus 82 iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 82 IFVPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 34568999999999999999998888887655
No 105
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=50.43 E-value=73 Score=25.13 Aligned_cols=50 Identities=10% Similarity=0.082 Sum_probs=33.3
Q ss_pred HHHcCChhHHHHHHh-hHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhc
Q 019956 139 IFAYVDAPGYQILKN-LNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTT 188 (333)
Q Consensus 139 al~~l~~~~~~vl~~-~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~ 188 (333)
|.+..+++.-.++.- .....-+.++++++||++++.+..|.+++..++..
T Consensus 55 G~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 55 GYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred hccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 333344443333332 22345578899999999999999999888777654
No 106
>PF12270 Cyt_c_ox_IV: Cytochrome c oxidase subunit IV; InterPro: IPR021050 This family of proteins is found in bacteria. Proteins in this family are approximately 140 amino acids in length. This family is the fourth subunit of the cytochrome c oxidase complex. This subunit does not have a catalytic capacity but instead, is required for assembly and/or stability of the complex []. ; GO: 0004129 cytochrome-c oxidase activity, 0055114 oxidation-reduction process, 0016021 integral to membrane
Probab=49.14 E-value=1.5e+02 Score=24.50 Aligned_cols=67 Identities=18% Similarity=0.264 Sum_probs=40.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhh--h----hhcCccccchHHH
Q 019956 202 PLQGWIMAIVMALLSGFAGVYTEAIMKKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDA--V----MNKGFFHGYSFIT 275 (333)
Q Consensus 202 ~~~G~~l~l~aa~~sala~v~~e~~lk~~~~~~~~~~n~~l~~~~~~~~~~~~~~~~~~~--~----~~~~~~~g~~~~~ 275 (333)
...|...+++++.++.+-+-|.....|+.+.++ +|+++ + -+.|||..++++.
T Consensus 34 E~~Gt~aL~ls~~l~~mig~yl~~~~rr~~~rP----------------------ED~~daEI~dgAGe~GfFsP~SwWP 91 (137)
T PF12270_consen 34 EWVGTVALVLSGGLALMIGFYLRFTARRIGPRP----------------------EDREDAEIADGAGELGFFSPHSWWP 91 (137)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHhhCCCCC----------------------ccccccccccCCCCcCcCCCccHhH
Confidence 456788888888888888888877777654311 23221 1 2357888888776
Q ss_pred HHHHHHHHHHhHHHH
Q 019956 276 VLMILNHALSGIAVS 290 (333)
Q Consensus 276 ~~~i~~~a~gg~~v~ 290 (333)
.......++.++-++
T Consensus 92 l~la~~~al~~lGla 106 (137)
T PF12270_consen 92 LVLAAAAALVFLGLA 106 (137)
T ss_pred HHHHHHHHHHHHHHH
Confidence 665554444443333
No 107
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=44.31 E-value=2.5e+02 Score=27.01 Aligned_cols=85 Identities=19% Similarity=0.323 Sum_probs=46.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHH------HHHHhhhhhhhhcCccccchHH
Q 019956 201 TPLQGWIMAIVMALLSGFAGVYTEAIMKKRPSRNINVQNFWLYVFGMAFNAV------AIVIQDFDAVMNKGFFHGYSFI 274 (333)
Q Consensus 201 ~~~~G~~l~l~aa~~sala~v~~e~~lk~~~~~~~~~~n~~l~~~~~~~~~~------~~~~~~~~~~~~~~~~~g~~~~ 274 (333)
....|++...++++++|...+=.||+ |+-+ | ++.|+. .++...++ .....|..++ ++..+..
T Consensus 4 ~ii~Gii~h~iGg~~~~sfy~P~kkv-k~Ws----W-Es~Wlv-~gi~swli~P~~~a~l~ip~~~~i-----~~~~~~~ 71 (344)
T PF06379_consen 4 AIILGIIFHAIGGFASGSFYVPFKKV-KGWS----W-ESYWLV-QGIFSWLIVPWLWALLAIPDFFSI-----YSATPAS 71 (344)
T ss_pred hHHHHHHHHHHHHHHhhhhccchhhc-CCcc----H-HHHHHH-HHHHHHHHHHHHHHHHhCCcHHHH-----HHhCChh
Confidence 45679999999999999888877765 3322 2 233322 22222211 1112222222 1122222
Q ss_pred HH-HHH---HHHHHHhHHHHHHhhhhh
Q 019956 275 TV-LMI---LNHALSGIAVSMVMKYAD 297 (333)
Q Consensus 275 ~~-~~i---~~~a~gg~~v~~v~k~~~ 297 (333)
++ ... +.-.+||+..+..+||.+
T Consensus 72 ~l~~~~l~G~lWGIGgltfGl~mryLG 98 (344)
T PF06379_consen 72 TLFWTFLFGVLWGIGGLTFGLAMRYLG 98 (344)
T ss_pred HHHHHHHHHHHHhcchhhHhHHHHHHh
Confidence 22 222 245789999999999977
No 108
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=35.92 E-value=5.2e+02 Score=26.89 Aligned_cols=22 Identities=27% Similarity=0.570 Sum_probs=17.0
Q ss_pred cCHHHHHHHHHHHhhhhccccc
Q 019956 171 LSEIQWAAFILLCCGCTTAQLN 192 (333)
Q Consensus 171 ls~~qw~al~ll~~Gv~~v~~~ 192 (333)
+....|+|++|...|+.++..+
T Consensus 236 l~~lD~IG~~L~~~Gl~LfLlg 257 (599)
T PF06609_consen 236 LKELDWIGIFLFIAGLALFLLG 257 (599)
T ss_pred HHHhhHHHHHHHHHHHHHHHHH
Confidence 3344699999999999887654
No 109
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=35.65 E-value=1.1e+02 Score=28.09 Aligned_cols=19 Identities=37% Similarity=0.406 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 019956 205 GWIMAIVMALLSGFAGVYT 223 (333)
Q Consensus 205 G~~l~l~aa~~sala~v~~ 223 (333)
|++..++|+++.|-.-|=.
T Consensus 1 G~~a~~va~~~fGs~~vPv 19 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPV 19 (254)
T ss_pred CchhHHHHHHHhcccceee
Confidence 4455666666665555543
No 110
>PRK11901 hypothetical protein; Reviewed
Probab=34.85 E-value=59 Score=30.87 Aligned_cols=26 Identities=23% Similarity=0.206 Sum_probs=15.8
Q ss_pred ccccccCCCCCCCccccccccCCCCCcc
Q 019956 5 KIKDEDNDGGGSSSGDLESLRGKPISVT 32 (333)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 (333)
..|-||+.+- ..+|+-.+|.|..+.+
T Consensus 3 Efkpe~elkP--DtSDRrp~Rsr~~~~~ 28 (327)
T PRK11901 3 EFKPEDELKP--DTSDRRPTRSRKSSNG 28 (327)
T ss_pred cCCcccccCC--CcccCCCcccccCCCC
Confidence 4555666554 5678777777744443
No 111
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=34.81 E-value=3.1e+02 Score=26.36 Aligned_cols=108 Identities=13% Similarity=0.098 Sum_probs=72.6
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHcCChh-HHHHHHhhHHHHHHHHHHHHhc-------CccCHHHHHHHHHHHhhhhc
Q 019956 117 DEVIVYPIPAVLYLVKNLLQYYIFAYVDAP-GYQILKNLNIISTGVLYRIILK-------KKLSEIQWAAFILLCCGCTT 188 (333)
Q Consensus 117 ~~~~~~~ipally~~~n~l~~~al~~l~~~-~~~vl~~~k~l~talls~l~Lk-------ekls~~qw~al~ll~~Gv~~ 188 (333)
..+....+-+++.-+.+..+=.+.+|+-.+ .+++...+...+=+++-.++.+ ++-...-++++++..+|+.+
T Consensus 71 ~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai 150 (344)
T PF06379_consen 71 STLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAI 150 (344)
T ss_pred hHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHH
Confidence 344555667777788888888888998876 4445555555555555444433 34445678899999999998
Q ss_pred ccccCCC-------CccccchhhHHHHHHHHHHHHHHHHHHHH
Q 019956 189 AQLNSNS-------DRVLQTPLQGWIMAIVMALLSGFAGVYTE 224 (333)
Q Consensus 189 v~~~~~~-------~~~~~~~~~G~~l~l~aa~~sala~v~~e 224 (333)
+...+.. +..+.+.-.|+++.+.+-++|++.+.=.|
T Consensus 151 ~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ 193 (344)
T PF06379_consen 151 CGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLD 193 (344)
T ss_pred HhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 8654211 11123455799999999999998776554
No 112
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=32.34 E-value=5.2e+02 Score=25.73 Aligned_cols=60 Identities=15% Similarity=0.113 Sum_probs=41.1
Q ss_pred HHhcCccCHHHHHHHHHHH--hhhhcccccCCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 019956 165 IILKKKLSEIQWAAFILLC--CGCTTAQLNSNSDRVLQTPLQGWIMAIVMALLSGFAGVYTEAIMKKRP 231 (333)
Q Consensus 165 l~Lkekls~~qw~al~ll~--~Gv~~v~~~~~~~~~~~~~~~G~~l~l~aa~~sala~v~~e~~lk~~~ 231 (333)
++-|+|+.+.|++=+.+.. .=++++..++ +...+....+.++.+-++-+.|...++|+..
T Consensus 317 ~~~~~~iHpiQY~LVGlAl~lFYlLLLSlSE-------hi~F~~AYliAa~a~i~Li~~Y~~~vl~~~k 378 (430)
T PF06123_consen 317 LLSKLRIHPIQYLLVGLALVLFYLLLLSLSE-------HIGFNLAYLIAALACIGLISLYLSSVLKSWK 378 (430)
T ss_pred HHhcCcccHHHHHHHHHHHHHHHHHHHHHHh-------hhchHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 3447899999986544332 2233333332 2345777888999999999999999999865
No 113
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=32.03 E-value=34 Score=31.89 Aligned_cols=74 Identities=11% Similarity=0.136 Sum_probs=62.5
Q ss_pred cchhhhhhhhhHHHHHHHHHHHHHHHHcCChhHHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhc
Q 019956 115 TLDEVIVYPIPAVLYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTT 188 (333)
Q Consensus 115 ~~~~~~~~~ipally~~~n~l~~~al~~l~~~~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~ 188 (333)
.++-...+.+.+++.+.-|....+=.+..+|-|+++-...|-..-+++++.+++|..+...|-+-++...|-..
T Consensus 251 a~~Fw~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~ 324 (347)
T KOG1442|consen 251 AIKFWILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLA 324 (347)
T ss_pred HHHHHHHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHH
Confidence 34555678888888888888888888999999999999999999999999999999999999887766666543
No 114
>PF05915 DUF872: Eukaryotic protein of unknown function (DUF872); InterPro: IPR008590 This entry represents several uncharacterised eukaryotic transmembrane proteins. The function of this currently unknown.
Probab=28.74 E-value=3e+02 Score=21.94 Aligned_cols=10 Identities=40% Similarity=0.913 Sum_probs=5.0
Q ss_pred ccccccccCC
Q 019956 3 YRKIKDEDND 12 (333)
Q Consensus 3 ~~~~~~~~~~ 12 (333)
|..++.||++
T Consensus 1 y~~l~~~d~d 10 (115)
T PF05915_consen 1 YSNLSNEDED 10 (115)
T ss_pred CCCCCCCCcc
Confidence 4455555554
No 115
>COG4720 Predicted membrane protein [Function unknown]
Probab=24.68 E-value=4.6e+02 Score=22.67 Aligned_cols=38 Identities=13% Similarity=0.088 Sum_probs=20.3
Q ss_pred HHHHhHHHHHHh--hhhhhHHHHHHH----HHHHHHHHHHHHHH
Q 019956 282 HALSGIAVSMVM--KYADNIVKVYST----SVAMLLTAVVSVFL 319 (333)
Q Consensus 282 ~a~gg~~v~~v~--k~~~~i~k~~~~----~~~~v~t~lls~~l 319 (333)
+.+++.+.++.. -|.++.-|.+.+ .+..+...+++-.+
T Consensus 119 mv~~y~l~~~l~~~~~~~a~~ki~~~~~a~ivq~v~g~ivg~iL 162 (177)
T COG4720 119 MVGWYLLAPYLDYLGWAEALGKIGTNGIAGIVQAVSGIIVGTIL 162 (177)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHhcchhHHHHHHHHHHHHHHHH
Confidence 333444444443 356677777666 45555555555444
No 116
>PRK02237 hypothetical protein; Provisional
Probab=22.48 E-value=2.7e+02 Score=22.05 Aligned_cols=47 Identities=6% Similarity=0.126 Sum_probs=36.3
Q ss_pred HHHHHHhhHHHHHHHHHHHHhcCccCHHHHHHHHHHHhhhhcccccC
Q 019956 147 GYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCCGCTTAQLNS 193 (333)
Q Consensus 147 ~~~vl~~~k~l~talls~l~Lkekls~~qw~al~ll~~Gv~~v~~~~ 193 (333)
.|..-...-++..-+..+.+=|+|.++..|++..+..+|+.++...+
T Consensus 61 vYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 61 VYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred HHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 34444445555555777888899999999999999999999987653
Done!