Query 019957
Match_columns 333
No_of_seqs 334 out of 3591
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 09:38:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019957.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019957hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e2x_A TCAB9; kijanose, tetron 99.9 3.7E-26 1.3E-30 216.0 8.9 168 154-331 95-266 (416)
2 4gek_A TRNA (CMO5U34)-methyltr 99.9 6.9E-24 2.4E-28 187.8 22.6 181 149-333 51-257 (261)
3 3dlc_A Putative S-adenosyl-L-m 99.9 5.4E-24 1.8E-28 182.8 18.0 177 152-332 30-213 (219)
4 3dh0_A SAM dependent methyltra 99.9 2.6E-23 8.7E-28 179.1 19.8 165 156-333 27-193 (219)
5 1vl5_A Unknown conserved prote 99.9 8.2E-23 2.8E-27 180.7 20.1 159 156-321 27-189 (260)
6 3dtn_A Putative methyltransfer 99.9 2.2E-22 7.5E-27 175.0 21.6 177 151-333 28-226 (234)
7 3bus_A REBM, methyltransferase 99.9 3.2E-22 1.1E-26 178.0 22.1 164 155-321 50-215 (273)
8 2o57_A Putative sarcosine dime 99.9 6.5E-22 2.2E-26 178.3 23.7 164 154-321 66-233 (297)
9 1xxl_A YCGJ protein; structura 99.9 3.1E-22 1.1E-26 174.9 20.2 159 156-321 11-173 (239)
10 3hnr_A Probable methyltransfer 99.9 2.4E-22 8.3E-27 173.0 18.4 166 157-332 36-211 (220)
11 1nkv_A Hypothetical protein YJ 99.9 3.2E-22 1.1E-26 176.3 18.8 165 149-320 19-185 (256)
12 3ujc_A Phosphoethanolamine N-m 99.9 5.2E-22 1.8E-26 175.6 17.7 165 149-321 38-205 (266)
13 3f4k_A Putative methyltransfer 99.9 1.8E-21 6.2E-26 171.5 20.9 165 149-320 28-194 (257)
14 3kkz_A Uncharacterized protein 99.9 1.3E-21 4.6E-26 173.6 20.1 166 149-321 28-195 (267)
15 2p7i_A Hypothetical protein; p 99.9 8.5E-22 2.9E-26 172.3 18.3 154 157-320 32-197 (250)
16 3vc1_A Geranyl diphosphate 2-C 99.9 2E-21 6.7E-26 176.6 20.6 160 156-321 106-268 (312)
17 1p91_A Ribosomal RNA large sub 99.9 4.8E-22 1.6E-26 176.7 15.8 179 60-278 2-182 (269)
18 3jwg_A HEN1, methyltransferase 99.9 1.2E-21 4E-26 168.8 17.5 164 154-319 17-189 (219)
19 3mgg_A Methyltransferase; NYSG 99.9 1.2E-21 4.1E-26 174.7 17.8 164 156-322 27-198 (276)
20 3jwh_A HEN1; methyltransferase 99.9 5.9E-22 2E-26 170.4 15.1 165 154-319 17-189 (217)
21 4htf_A S-adenosylmethionine-de 99.9 1.1E-21 3.6E-26 176.0 16.3 151 167-321 69-231 (285)
22 3l8d_A Methyltransferase; stru 99.9 2E-21 6.8E-26 169.7 17.4 154 154-320 43-198 (242)
23 3h2b_A SAM-dependent methyltra 99.9 6.1E-22 2.1E-26 168.5 12.5 138 167-321 42-181 (203)
24 3g5l_A Putative S-adenosylmeth 99.9 3.5E-21 1.2E-25 169.5 17.7 158 156-320 34-214 (253)
25 3ege_A Putative methyltransfer 99.9 1.6E-21 5.5E-26 172.7 15.2 156 153-321 21-177 (261)
26 3ocj_A Putative exported prote 99.9 1.5E-21 5.1E-26 176.9 15.1 167 164-333 116-304 (305)
27 1kpg_A CFA synthase;, cyclopro 99.9 1.4E-20 4.7E-25 168.8 20.3 160 156-321 54-227 (287)
28 3i9f_A Putative type 11 methyl 99.9 1.4E-21 4.8E-26 161.5 12.7 139 160-323 11-149 (170)
29 3e23_A Uncharacterized protein 99.9 6.6E-21 2.3E-25 163.1 17.3 148 166-333 43-202 (211)
30 2p35_A Trans-aconitate 2-methy 99.9 9.4E-21 3.2E-25 167.0 18.5 153 156-317 23-185 (259)
31 3hem_A Cyclopropane-fatty-acyl 99.9 1.4E-20 4.7E-25 170.2 20.0 161 155-321 61-242 (302)
32 2xvm_A Tellurite resistance pr 99.9 1.7E-20 5.9E-25 158.5 19.3 160 157-333 23-199 (199)
33 4fsd_A Arsenic methyltransfera 99.9 8.7E-21 3E-25 177.2 18.8 158 164-321 81-250 (383)
34 3ou2_A SAM-dependent methyltra 99.9 1.2E-20 4.3E-25 161.8 18.3 165 156-330 35-213 (218)
35 1y8c_A S-adenosylmethionine-de 99.9 1.5E-21 5E-26 170.6 12.3 173 154-333 23-245 (246)
36 3mcz_A O-methyltransferase; ad 99.9 2.3E-20 7.9E-25 172.3 20.8 173 157-333 169-349 (352)
37 3ccf_A Cyclopropane-fatty-acyl 99.9 4.2E-21 1.5E-25 171.5 15.4 151 157-320 48-208 (279)
38 1xtp_A LMAJ004091AAA; SGPP, st 99.9 2.4E-21 8.2E-26 170.4 13.4 155 157-324 84-240 (254)
39 1x19_A CRTF-related protein; m 99.9 4.5E-20 1.5E-24 170.9 22.0 173 155-333 179-359 (359)
40 3gu3_A Methyltransferase; alph 99.9 2.1E-20 7.1E-25 167.6 18.9 162 155-321 10-189 (284)
41 3dli_A Methyltransferase; PSI- 99.9 9.7E-21 3.3E-25 165.4 15.7 153 154-323 28-185 (240)
42 3sm3_A SAM-dependent methyltra 99.9 2.3E-20 7.9E-25 161.8 17.8 152 166-320 30-205 (235)
43 1vlm_A SAM-dependent methyltra 99.9 1.7E-20 5.7E-25 161.7 16.7 147 167-333 48-219 (219)
44 2aot_A HMT, histamine N-methyl 99.9 7.4E-21 2.5E-25 171.2 14.9 149 165-319 51-218 (292)
45 3lcc_A Putative methyl chlorid 99.8 2E-20 7E-25 162.8 16.6 138 167-321 67-206 (235)
46 3pfg_A N-methyltransferase; N, 99.8 4.5E-21 1.5E-25 169.8 12.6 157 166-333 50-249 (263)
47 3bkw_A MLL3908 protein, S-aden 99.8 4.8E-20 1.7E-24 160.8 18.9 158 156-321 33-213 (243)
48 3bkx_A SAM-dependent methyltra 99.8 4.9E-20 1.7E-24 164.0 19.0 163 156-320 33-217 (275)
49 1pjz_A Thiopurine S-methyltran 99.8 8.2E-21 2.8E-25 161.9 13.2 147 160-320 16-174 (203)
50 3gwz_A MMCR; methyltransferase 99.8 1.7E-19 5.9E-24 167.6 23.3 170 157-332 193-368 (369)
51 3i53_A O-methyltransferase; CO 99.8 5.4E-20 1.9E-24 168.5 19.0 161 165-331 168-330 (332)
52 2yqz_A Hypothetical protein TT 99.8 2.5E-20 8.4E-25 164.6 16.1 150 164-319 37-193 (263)
53 2a14_A Indolethylamine N-methy 99.8 4.9E-21 1.7E-25 169.8 11.5 162 164-333 53-260 (263)
54 2ex4_A Adrenal gland protein A 99.8 1.2E-20 4.2E-25 164.9 13.1 145 166-322 79-225 (241)
55 2fk8_A Methoxy mycolic acid sy 99.8 5.7E-20 2E-24 167.3 18.0 160 155-320 79-252 (318)
56 3e8s_A Putative SAM dependent 99.8 1.1E-20 3.9E-25 162.8 11.6 166 156-333 42-227 (227)
57 3g2m_A PCZA361.24; SAM-depende 99.8 3.9E-20 1.3E-24 166.9 15.6 166 152-321 69-273 (299)
58 3bxo_A N,N-dimethyltransferase 99.8 1.1E-20 3.8E-25 164.5 11.2 158 165-333 39-239 (239)
59 2gs9_A Hypothetical protein TT 99.8 7.3E-20 2.5E-24 156.5 15.8 134 166-313 36-171 (211)
60 2r3s_A Uncharacterized protein 99.8 2.1E-19 7.1E-24 164.6 19.8 174 156-333 153-335 (335)
61 1qzz_A RDMB, aclacinomycin-10- 99.8 2.9E-19 9.9E-24 166.2 20.3 171 157-332 173-355 (374)
62 1tw3_A COMT, carminomycin 4-O- 99.8 3.3E-19 1.1E-23 165.0 20.5 172 157-333 174-356 (360)
63 3thr_A Glycine N-methyltransfe 99.8 2E-19 6.7E-24 161.7 17.5 124 152-277 43-178 (293)
64 2gb4_A Thiopurine S-methyltran 99.8 3.3E-19 1.1E-23 156.8 18.0 152 155-320 57-225 (252)
65 2ip2_A Probable phenazine-spec 99.8 5.6E-19 1.9E-23 161.8 20.0 171 156-332 158-333 (334)
66 2i62_A Nicotinamide N-methyltr 99.8 4E-20 1.4E-24 163.5 11.9 161 165-333 55-261 (265)
67 3d2l_A SAM-dependent methyltra 99.8 3.7E-19 1.3E-23 155.2 17.7 170 154-333 23-243 (243)
68 4hg2_A Methyltransferase type 99.8 5E-20 1.7E-24 162.5 11.9 114 151-278 26-139 (257)
69 1ve3_A Hypothetical protein PH 99.8 9E-20 3.1E-24 157.5 13.0 161 156-325 30-218 (227)
70 3cc8_A Putative methyltransfer 99.8 2.2E-19 7.5E-24 155.0 14.6 150 157-321 24-184 (230)
71 3dp7_A SAM-dependent methyltra 99.8 4.3E-19 1.5E-23 164.5 17.5 152 165-320 178-340 (363)
72 3g5t_A Trans-aconitate 3-methy 99.8 6.8E-19 2.3E-23 158.8 18.1 160 151-314 22-196 (299)
73 2kw5_A SLR1183 protein; struct 99.8 7E-20 2.4E-24 155.5 9.9 138 166-320 30-169 (202)
74 3cgg_A SAM-dependent methyltra 99.8 1.3E-18 4.4E-23 146.2 17.6 139 165-333 45-195 (195)
75 3m70_A Tellurite resistance pr 99.8 1.3E-18 4.5E-23 155.8 18.4 156 160-333 114-286 (286)
76 4a6d_A Hydroxyindole O-methylt 99.8 2.7E-18 9.1E-23 158.6 20.8 170 157-332 170-345 (353)
77 3lst_A CALO1 methyltransferase 99.8 5.4E-19 1.9E-23 162.9 16.0 168 157-332 175-347 (348)
78 1ri5_A MRNA capping enzyme; me 99.8 9.3E-19 3.2E-23 157.3 17.1 154 165-321 63-249 (298)
79 3e05_A Precorrin-6Y C5,15-meth 99.8 1E-17 3.6E-22 142.4 22.5 137 151-315 25-161 (204)
80 2p8j_A S-adenosylmethionine-de 99.8 2E-19 6.8E-24 153.4 11.4 149 165-319 22-180 (209)
81 2g72_A Phenylethanolamine N-me 99.8 2.3E-19 8E-24 161.1 11.3 157 156-320 59-254 (289)
82 3grz_A L11 mtase, ribosomal pr 99.8 2.3E-18 7.8E-23 146.6 16.7 138 165-333 59-196 (205)
83 1fp1_D Isoliquiritigenin 2'-O- 99.8 2.3E-18 7.7E-23 160.2 18.1 163 157-332 199-372 (372)
84 2qe6_A Uncharacterized protein 99.8 3.9E-18 1.3E-22 151.9 17.9 152 157-318 67-238 (274)
85 3g07_A 7SK snRNA methylphospha 99.8 3.3E-19 1.1E-23 160.5 10.3 153 166-320 46-267 (292)
86 3reo_A (ISO)eugenol O-methyltr 99.8 8.3E-18 2.8E-22 156.1 20.0 156 164-332 201-366 (368)
87 1wzn_A SAM-dependent methyltra 99.8 1.1E-17 3.7E-22 146.9 19.3 162 164-333 39-250 (252)
88 3ofk_A Nodulation protein S; N 99.8 1.7E-18 5.7E-23 148.5 13.1 114 156-277 41-157 (216)
89 3p9c_A Caffeic acid O-methyltr 99.8 1.4E-17 4.9E-22 154.3 20.1 162 158-332 192-364 (364)
90 3htx_A HEN1; HEN1, small RNA m 99.8 1.5E-17 5E-22 163.9 20.0 164 153-319 708-895 (950)
91 1fbn_A MJ fibrillarin homologu 99.8 2.5E-17 8.6E-22 142.9 18.4 147 162-332 70-227 (230)
92 3njr_A Precorrin-6Y methylase; 99.8 8.6E-17 2.9E-21 137.0 20.9 138 152-320 41-178 (204)
93 2avn_A Ubiquinone/menaquinone 99.8 4.3E-18 1.5E-22 150.4 12.8 149 156-320 46-211 (260)
94 3hm2_A Precorrin-6Y C5,15-meth 99.8 2.8E-17 9.7E-22 136.3 16.6 137 154-319 13-150 (178)
95 1fp2_A Isoflavone O-methyltran 99.8 1.4E-17 4.8E-22 153.7 16.2 154 165-331 187-351 (352)
96 1dus_A MJ0882; hypothetical pr 99.8 3.5E-17 1.2E-21 137.2 16.7 151 153-332 39-193 (194)
97 2vdw_A Vaccinia virus capping 99.7 4.6E-18 1.6E-22 153.5 11.8 155 166-321 48-245 (302)
98 3ggd_A SAM-dependent methyltra 99.7 8.6E-18 2.9E-22 147.0 13.0 143 165-319 55-216 (245)
99 3mq2_A 16S rRNA methyltransfer 99.7 3.9E-18 1.3E-22 146.6 10.6 152 161-320 22-182 (218)
100 2pxx_A Uncharacterized protein 99.7 2E-17 6.8E-22 141.2 14.5 115 155-277 33-162 (215)
101 2zfu_A Nucleomethylin, cerebra 99.7 3.5E-17 1.2E-21 140.2 14.2 124 165-332 66-190 (215)
102 3orh_A Guanidinoacetate N-meth 99.7 1.2E-18 4E-23 152.0 4.9 148 157-318 52-206 (236)
103 2nxc_A L11 mtase, ribosomal pr 99.7 4.9E-17 1.7E-21 143.3 15.3 136 165-332 119-254 (254)
104 1yb2_A Hypothetical protein TA 99.7 4E-17 1.4E-21 145.5 14.8 134 156-320 100-235 (275)
105 1l3i_A Precorrin-6Y methyltran 99.7 8.1E-17 2.8E-21 134.8 15.7 136 151-316 18-154 (192)
106 1zg3_A Isoflavanone 4'-O-methy 99.7 5.6E-17 1.9E-21 150.0 15.7 154 165-331 192-357 (358)
107 1zx0_A Guanidinoacetate N-meth 99.7 3.9E-18 1.3E-22 148.5 7.4 139 165-316 59-204 (236)
108 4df3_A Fibrillarin-like rRNA/T 99.7 1.2E-16 4E-21 137.9 16.4 149 162-330 73-229 (233)
109 1yzh_A TRNA (guanine-N(7)-)-me 99.7 1.1E-16 3.9E-21 137.1 16.3 107 166-275 41-157 (214)
110 1xdz_A Methyltransferase GIDB; 99.7 1.6E-16 5.3E-21 138.8 16.6 129 165-320 69-200 (240)
111 3q87_B N6 adenine specific DNA 99.7 3.4E-16 1.2E-20 129.3 17.6 129 154-321 9-148 (170)
112 2yxd_A Probable cobalt-precorr 99.7 4.5E-16 1.5E-20 129.3 18.4 135 150-318 19-153 (183)
113 3m33_A Uncharacterized protein 99.7 8.3E-17 2.8E-21 139.2 14.4 117 165-320 47-165 (226)
114 3fpf_A Mtnas, putative unchara 99.7 1.1E-16 3.9E-21 142.2 15.0 138 130-275 75-223 (298)
115 2ld4_A Anamorsin; methyltransf 99.7 5.3E-17 1.8E-21 134.8 12.1 116 163-314 9-128 (176)
116 2b3t_A Protein methyltransfera 99.7 3.3E-16 1.1E-20 139.6 18.0 152 153-332 97-275 (276)
117 2pwy_A TRNA (adenine-N(1)-)-me 99.7 2.4E-16 8.1E-21 138.7 16.7 142 149-320 79-222 (258)
118 1nt2_A Fibrillarin-like PRE-rR 99.7 2.9E-16 1E-20 134.3 16.6 144 163-332 54-209 (210)
119 3mb5_A SAM-dependent methyltra 99.7 2.2E-16 7.7E-21 138.8 15.9 141 149-319 76-219 (255)
120 2fca_A TRNA (guanine-N(7)-)-me 99.7 1.5E-16 5.2E-21 136.4 14.0 108 166-276 38-155 (213)
121 3p2e_A 16S rRNA methylase; met 99.7 2E-17 6.9E-22 143.0 8.4 150 165-321 23-184 (225)
122 3evz_A Methyltransferase; NYSG 99.7 1.1E-15 3.8E-20 132.2 19.4 132 164-321 53-205 (230)
123 3bgv_A MRNA CAP guanine-N7 met 99.7 2.1E-16 7.2E-21 143.4 15.5 154 166-321 34-231 (313)
124 3giw_A Protein of unknown func 99.7 1.5E-16 5.2E-21 139.8 13.7 157 156-318 67-243 (277)
125 3p9n_A Possible methyltransfer 99.7 1.7E-16 5.7E-21 133.4 12.7 123 152-278 27-157 (189)
126 3mti_A RRNA methylase; SAM-dep 99.7 4.9E-16 1.7E-20 129.9 14.6 108 165-277 21-138 (185)
127 3fzg_A 16S rRNA methylase; met 99.7 1.1E-16 3.8E-21 132.3 9.6 164 149-332 34-197 (200)
128 3lbf_A Protein-L-isoaspartate 99.7 5.9E-16 2E-20 132.0 14.6 114 152-276 63-176 (210)
129 3eey_A Putative rRNA methylase 99.7 5.1E-16 1.8E-20 131.0 14.0 112 164-277 20-142 (197)
130 4dzr_A Protein-(glutamine-N5) 99.7 5.7E-17 1.9E-21 138.3 7.2 139 155-320 18-190 (215)
131 1o54_A SAM-dependent O-methylt 99.7 1.3E-15 4.6E-20 135.7 16.2 138 152-319 98-236 (277)
132 3lpm_A Putative methyltransfer 99.7 1.4E-15 4.8E-20 134.2 15.8 137 157-319 39-198 (259)
133 2ipx_A RRNA 2'-O-methyltransfe 99.7 2E-15 6.8E-20 131.1 16.3 150 162-332 73-231 (233)
134 1jsx_A Glucose-inhibited divis 99.7 1.3E-15 4.5E-20 129.5 14.6 132 155-319 51-185 (207)
135 3id6_C Fibrillarin-like rRNA/T 99.7 5.1E-15 1.7E-19 127.9 18.3 157 155-332 62-230 (232)
136 3dxy_A TRNA (guanine-N(7)-)-me 99.7 3.6E-16 1.2E-20 134.5 10.3 109 166-277 34-153 (218)
137 3lec_A NADB-rossmann superfami 99.6 3.6E-15 1.2E-19 128.1 15.7 136 155-320 12-147 (230)
138 2frn_A Hypothetical protein PH 99.6 6.2E-15 2.1E-19 131.5 16.9 137 156-318 117-253 (278)
139 2fyt_A Protein arginine N-meth 99.6 2.4E-15 8.2E-20 138.0 14.4 112 156-271 54-168 (340)
140 3g89_A Ribosomal RNA small sub 99.6 1.1E-15 3.6E-20 134.2 11.5 129 165-320 79-210 (249)
141 3iv6_A Putative Zn-dependent a 99.6 1.8E-15 6E-20 133.1 12.6 111 154-276 33-150 (261)
142 1i9g_A Hypothetical protein RV 99.6 5E-15 1.7E-19 132.0 15.7 120 151-277 84-206 (280)
143 4dcm_A Ribosomal RNA large sub 99.6 7.8E-15 2.7E-19 136.1 17.5 124 152-276 208-336 (375)
144 2ift_A Putative methylase HI07 99.6 9.9E-16 3.4E-20 130.1 10.3 120 154-277 40-166 (201)
145 1g8a_A Fibrillarin-like PRE-rR 99.6 7.1E-15 2.4E-19 126.9 15.7 147 164-332 71-226 (227)
146 3uwp_A Histone-lysine N-methyl 99.6 1.1E-15 3.7E-20 140.9 11.0 125 152-278 159-292 (438)
147 3bzb_A Uncharacterized protein 99.6 6.9E-15 2.4E-19 131.4 15.7 150 153-320 66-235 (281)
148 3q7e_A Protein arginine N-meth 99.6 3.5E-15 1.2E-19 137.4 14.0 109 163-275 63-174 (349)
149 3ckk_A TRNA (guanine-N(7)-)-me 99.6 2E-15 6.9E-20 131.3 11.6 109 165-276 45-170 (235)
150 1dl5_A Protein-L-isoaspartate 99.6 4.2E-15 1.4E-19 135.1 14.0 116 153-277 62-178 (317)
151 2yxe_A Protein-L-isoaspartate 99.6 5.6E-15 1.9E-19 126.4 13.9 116 153-277 64-180 (215)
152 3gdh_A Trimethylguanosine synt 99.6 7.3E-17 2.5E-21 140.7 2.0 150 155-319 66-216 (241)
153 2fpo_A Methylase YHHF; structu 99.6 3.4E-15 1.2E-19 126.8 12.2 122 151-277 38-163 (202)
154 3gnl_A Uncharacterized protein 99.6 6.8E-15 2.3E-19 127.4 14.1 136 155-320 12-147 (244)
155 3bwc_A Spermidine synthase; SA 99.6 3.7E-15 1.3E-19 134.6 13.0 137 165-320 94-238 (304)
156 2b25_A Hypothetical protein; s 99.6 3.9E-15 1.3E-19 136.4 12.8 122 151-277 90-222 (336)
157 3dmg_A Probable ribosomal RNA 99.6 9.4E-15 3.2E-19 135.7 15.4 106 165-276 232-342 (381)
158 3u81_A Catechol O-methyltransf 99.6 8.6E-15 2.9E-19 126.0 14.1 122 152-276 44-172 (221)
159 3kr9_A SAM-dependent methyltra 99.6 1.5E-14 5.1E-19 124.1 15.3 140 156-326 7-150 (225)
160 1vbf_A 231AA long hypothetical 99.6 1E-14 3.4E-19 126.2 14.4 112 153-277 57-168 (231)
161 2fhp_A Methylase, putative; al 99.6 3.8E-15 1.3E-19 124.3 11.1 126 149-278 26-158 (187)
162 2ozv_A Hypothetical protein AT 99.6 2.2E-14 7.6E-19 126.6 16.4 117 157-275 27-171 (260)
163 2esr_A Methyltransferase; stru 99.6 1.5E-15 5.1E-20 125.9 8.3 121 154-278 18-142 (177)
164 2pjd_A Ribosomal RNA small sub 99.6 6.4E-15 2.2E-19 135.4 13.2 119 152-276 182-305 (343)
165 3ntv_A MW1564 protein; rossman 99.6 6.3E-15 2.1E-19 127.9 12.4 120 152-276 57-178 (232)
166 1ixk_A Methyltransferase; open 99.6 7.6E-15 2.6E-19 133.2 13.4 122 153-277 105-249 (315)
167 1g6q_1 HnRNP arginine N-methyl 99.6 1.3E-14 4.6E-19 132.4 15.1 113 157-273 29-144 (328)
168 1ej0_A FTSJ; methyltransferase 99.6 1.9E-14 6.5E-19 118.5 14.4 100 164-277 20-139 (180)
169 1ws6_A Methyltransferase; stru 99.6 2.1E-15 7.3E-20 123.9 8.4 120 151-278 24-151 (171)
170 2h00_A Methyltransferase 10 do 99.6 6.2E-15 2.1E-19 129.5 11.1 147 166-319 65-235 (254)
171 3r0q_C Probable protein argini 99.6 9.2E-15 3.2E-19 135.9 12.6 116 156-276 53-171 (376)
172 3opn_A Putative hemolysin; str 99.6 8.2E-16 2.8E-20 133.4 5.1 144 165-321 36-183 (232)
173 1jg1_A PIMT;, protein-L-isoasp 99.6 1.3E-14 4.6E-19 126.0 12.8 114 153-277 78-192 (235)
174 2gpy_A O-methyltransferase; st 99.6 1.2E-14 4.3E-19 125.9 12.2 120 151-275 39-161 (233)
175 3hp7_A Hemolysin, putative; st 99.6 8E-15 2.7E-19 130.5 11.0 142 165-321 84-231 (291)
176 2vdv_E TRNA (guanine-N(7)-)-me 99.6 1.7E-14 5.8E-19 126.3 12.9 104 165-276 48-175 (246)
177 3tfw_A Putative O-methyltransf 99.6 1.6E-14 5.5E-19 126.6 12.7 121 152-277 49-173 (248)
178 2y1w_A Histone-arginine methyl 99.6 1.7E-14 5.7E-19 132.8 13.2 116 156-276 40-157 (348)
179 3tma_A Methyltransferase; thum 99.6 5.1E-14 1.7E-18 129.9 16.2 125 148-275 185-318 (354)
180 3duw_A OMT, O-methyltransferas 99.6 2.2E-14 7.7E-19 123.4 12.9 121 152-277 44-170 (223)
181 2yvl_A TRMI protein, hypotheti 99.6 7.2E-14 2.5E-18 122.0 16.0 116 152-276 77-192 (248)
182 2bm8_A Cephalosporin hydroxyla 99.6 6.4E-15 2.2E-19 128.2 8.7 133 156-317 71-214 (236)
183 1u2z_A Histone-lysine N-methyl 99.6 2E-14 6.8E-19 134.8 12.4 125 152-278 228-363 (433)
184 3dr5_A Putative O-methyltransf 99.6 2E-14 6.8E-19 123.8 11.3 105 167-276 57-165 (221)
185 3c3p_A Methyltransferase; NP_9 99.5 3E-14 1E-18 121.6 11.8 110 160-275 50-161 (210)
186 1af7_A Chemotaxis receptor met 99.5 3.9E-14 1.3E-18 125.6 12.4 108 166-273 105-251 (274)
187 1i1n_A Protein-L-isoaspartate 99.5 1.3E-13 4.3E-18 118.9 14.7 114 157-276 66-184 (226)
188 2igt_A SAM dependent methyltra 99.5 4.3E-14 1.5E-18 129.0 12.2 119 155-277 141-275 (332)
189 3tm4_A TRNA (guanine N2-)-meth 99.5 2.4E-13 8.3E-18 126.2 17.5 141 149-319 201-349 (373)
190 4azs_A Methyltransferase WBDD; 99.5 1.3E-14 4.3E-19 142.0 9.1 108 166-278 66-177 (569)
191 3tr6_A O-methyltransferase; ce 99.5 2.8E-14 9.5E-19 122.9 9.7 121 152-277 50-177 (225)
192 2pbf_A Protein-L-isoaspartate 99.5 1.1E-13 3.6E-18 119.5 13.3 115 156-276 68-195 (227)
193 1o9g_A RRNA methyltransferase; 99.5 2.2E-14 7.7E-19 125.7 8.8 118 156-275 41-215 (250)
194 3r3h_A O-methyltransferase, SA 99.5 7.8E-15 2.7E-19 128.2 5.6 121 152-277 46-173 (242)
195 1sui_A Caffeoyl-COA O-methyltr 99.5 6.4E-14 2.2E-18 122.7 11.2 119 153-276 66-192 (247)
196 3ajd_A Putative methyltransfer 99.5 4.6E-14 1.6E-18 125.6 10.0 119 157-278 74-215 (274)
197 2yxl_A PH0851 protein, 450AA l 99.5 2.4E-13 8.3E-18 129.2 15.5 123 152-277 245-392 (450)
198 4hc4_A Protein arginine N-meth 99.5 1.4E-13 4.7E-18 127.0 13.3 105 164-273 81-188 (376)
199 3a27_A TYW2, uncharacterized p 99.5 1.6E-13 5.6E-18 121.9 13.2 106 164-277 117-222 (272)
200 2plw_A Ribosomal RNA methyltra 99.5 2.1E-13 7.1E-18 115.2 13.2 98 165-276 21-156 (201)
201 3b3j_A Histone-arginine methyl 99.5 1.2E-13 4.1E-18 132.0 12.7 114 156-274 148-263 (480)
202 3gjy_A Spermidine synthase; AP 99.5 4.3E-13 1.5E-17 120.6 15.2 106 168-276 91-202 (317)
203 2qm3_A Predicted methyltransfe 99.5 1.1E-12 3.8E-17 121.8 18.3 105 165-274 171-278 (373)
204 1nv8_A HEMK protein; class I a 99.5 2.7E-13 9.2E-18 121.2 13.3 117 152-274 109-249 (284)
205 3adn_A Spermidine synthase; am 99.5 6.4E-13 2.2E-17 119.1 15.6 111 166-276 83-200 (294)
206 3cbg_A O-methyltransferase; cy 99.5 1.7E-13 5.9E-18 118.8 11.4 118 154-276 60-184 (232)
207 2hnk_A SAM-dependent O-methylt 99.5 1.3E-13 4.5E-18 120.0 10.7 121 151-276 45-183 (239)
208 1wy7_A Hypothetical protein PH 99.5 2.6E-12 9E-17 109.0 18.1 137 150-318 30-171 (207)
209 1r18_A Protein-L-isoaspartate( 99.5 2.2E-13 7.7E-18 117.5 11.3 114 156-276 72-196 (227)
210 1zq9_A Probable dimethyladenos 99.5 5.8E-14 2E-18 125.6 7.7 115 151-271 13-144 (285)
211 1iy9_A Spermidine synthase; ro 99.5 7E-13 2.4E-17 117.9 14.1 147 166-332 75-235 (275)
212 2avd_A Catechol-O-methyltransf 99.5 2.6E-13 8.7E-18 117.1 10.5 119 153-276 56-181 (229)
213 1uir_A Polyamine aminopropyltr 99.4 1.6E-12 5.4E-17 117.8 15.6 110 166-275 77-196 (314)
214 3sso_A Methyltransferase; macr 99.4 6.2E-14 2.1E-18 128.9 6.2 109 154-276 205-326 (419)
215 1inl_A Spermidine synthase; be 99.4 1.7E-12 5.8E-17 116.6 15.3 109 166-275 90-206 (296)
216 3c3y_A Pfomt, O-methyltransfer 99.4 3.5E-13 1.2E-17 117.3 10.3 117 154-275 58-182 (237)
217 3lcv_B Sisomicin-gentamicin re 99.4 6.5E-13 2.2E-17 114.8 11.6 159 151-330 119-279 (281)
218 3k6r_A Putative transferase PH 99.4 2.9E-12 1E-16 113.5 16.1 136 156-317 117-252 (278)
219 1ne2_A Hypothetical protein TA 99.4 3.7E-12 1.3E-16 107.6 16.0 89 164-264 49-139 (200)
220 1sqg_A SUN protein, FMU protei 99.4 1E-12 3.5E-17 124.2 13.1 123 151-277 231-377 (429)
221 2pt6_A Spermidine synthase; tr 99.4 1.9E-12 6.4E-17 117.6 14.0 108 166-275 116-231 (321)
222 2frx_A Hypothetical protein YE 99.4 1.9E-12 6.6E-17 123.5 13.7 120 156-278 105-250 (479)
223 3frh_A 16S rRNA methylase; met 99.4 4.3E-12 1.5E-16 108.7 13.0 102 165-274 104-206 (253)
224 3m6w_A RRNA methylase; rRNA me 99.4 6.3E-13 2.1E-17 125.8 8.4 118 156-277 91-232 (464)
225 1mjf_A Spermidine synthase; sp 99.4 3.6E-12 1.2E-16 113.7 12.9 107 165-275 74-194 (281)
226 2i7c_A Spermidine synthase; tr 99.4 4.2E-12 1.4E-16 113.3 13.3 110 166-275 78-193 (283)
227 2b2c_A Spermidine synthase; be 99.4 2.3E-12 8E-17 116.5 11.5 107 166-274 108-222 (314)
228 2nyu_A Putative ribosomal RNA 99.4 1.3E-12 4.5E-17 109.7 9.0 100 164-277 20-148 (196)
229 3m4x_A NOL1/NOP2/SUN family pr 99.4 7.9E-13 2.7E-17 125.0 8.3 119 156-277 95-237 (456)
230 2b78_A Hypothetical protein SM 99.4 2.1E-12 7.1E-17 120.3 10.8 110 165-277 211-334 (385)
231 1xj5_A Spermidine synthase 1; 99.4 1.9E-12 6.6E-17 118.0 10.3 109 165-274 119-235 (334)
232 2f8l_A Hypothetical protein LM 99.4 8.3E-12 2.8E-16 114.6 14.6 145 148-315 108-279 (344)
233 3dou_A Ribosomal RNA large sub 99.4 5E-12 1.7E-16 106.2 12.0 98 164-277 23-142 (191)
234 2o07_A Spermidine synthase; st 99.3 2.3E-12 7.8E-17 116.2 9.2 111 165-276 94-211 (304)
235 3c0k_A UPF0064 protein YCCW; P 99.3 9.1E-12 3.1E-16 116.5 13.6 110 165-277 219-342 (396)
236 2cmg_A Spermidine synthase; tr 99.3 1.1E-11 3.8E-16 109.3 13.4 99 166-275 72-172 (262)
237 2wa2_A Non-structural protein 99.3 5.8E-13 2E-17 118.3 5.2 104 164-276 80-195 (276)
238 2oxt_A Nucleoside-2'-O-methylt 99.3 7.8E-13 2.7E-17 116.8 5.4 104 164-276 72-187 (265)
239 2as0_A Hypothetical protein PH 99.3 4E-12 1.4E-16 119.0 9.9 109 166-277 217-338 (396)
240 1wxx_A TT1595, hypothetical pr 99.3 5.4E-12 1.8E-16 117.5 10.3 107 166-277 209-328 (382)
241 1qam_A ERMC' methyltransferase 99.3 1.7E-12 5.7E-17 113.5 6.1 115 151-272 15-144 (244)
242 1uwv_A 23S rRNA (uracil-5-)-me 99.3 7.2E-11 2.5E-15 111.6 15.9 112 154-274 274-389 (433)
243 3v97_A Ribosomal RNA large sub 99.3 1.5E-11 5.1E-16 122.7 10.9 108 166-276 539-659 (703)
244 4dmg_A Putative uncharacterize 99.3 5E-11 1.7E-15 111.0 13.2 106 166-277 214-329 (393)
245 2okc_A Type I restriction enzy 99.2 4.1E-11 1.4E-15 113.7 12.2 147 129-277 129-310 (445)
246 2ih2_A Modification methylase 99.2 9.1E-11 3.1E-15 110.4 14.1 118 147-277 20-167 (421)
247 2h1r_A Dimethyladenosine trans 99.2 5.4E-11 1.8E-15 107.0 11.1 110 151-268 27-153 (299)
248 1yub_A Ermam, rRNA methyltrans 99.2 8.5E-14 2.9E-18 121.8 -7.2 113 154-274 17-145 (245)
249 2yx1_A Hypothetical protein MJ 99.2 7.9E-11 2.7E-15 107.7 12.3 101 165-277 194-294 (336)
250 2xyq_A Putative 2'-O-methyl tr 99.2 4.2E-11 1.4E-15 106.7 10.1 117 163-320 60-195 (290)
251 3gru_A Dimethyladenosine trans 99.2 8.6E-11 2.9E-15 105.0 11.5 89 151-246 35-123 (295)
252 2p41_A Type II methyltransfera 99.2 8.4E-12 2.9E-16 112.4 4.4 103 165-277 81-194 (305)
253 3k0b_A Predicted N6-adenine-sp 99.2 1.5E-10 5.1E-15 107.8 12.2 127 148-277 183-353 (393)
254 2jjq_A Uncharacterized RNA met 99.2 4.4E-10 1.5E-14 105.7 15.1 100 164-274 288-387 (425)
255 3ldg_A Putative uncharacterize 99.2 2.9E-10 9.8E-15 105.5 13.4 126 149-277 177-346 (384)
256 3ldu_A Putative methylase; str 99.2 1.6E-10 5.6E-15 107.4 11.4 126 149-277 178-347 (385)
257 2b9e_A NOL1/NOP2/SUN domain fa 99.1 2.9E-10 1E-14 102.4 12.4 117 157-277 93-237 (309)
258 3tqs_A Ribosomal RNA small sub 99.1 4.2E-10 1.4E-14 98.6 10.3 86 151-244 14-103 (255)
259 2efj_A 3,7-dimethylxanthine me 99.0 3.2E-09 1.1E-13 97.8 13.8 148 167-319 53-289 (384)
260 3bt7_A TRNA (uracil-5-)-methyl 99.0 6.3E-10 2.1E-14 103.0 9.1 111 154-276 202-328 (369)
261 3b5i_A S-adenosyl-L-methionine 99.0 6.5E-09 2.2E-13 95.6 15.5 154 167-320 53-296 (374)
262 2ar0_A M.ecoki, type I restric 99.0 9E-10 3.1E-14 106.7 9.9 129 146-277 149-315 (541)
263 2dul_A N(2),N(2)-dimethylguano 99.0 9.6E-10 3.3E-14 101.8 9.4 102 166-274 47-164 (378)
264 2qfm_A Spermine synthase; sper 99.0 9.1E-10 3.1E-14 100.2 8.3 111 166-277 188-317 (364)
265 3fut_A Dimethyladenosine trans 99.0 2.3E-09 7.9E-14 94.6 9.9 87 151-246 32-119 (271)
266 3axs_A Probable N(2),N(2)-dime 98.9 2.4E-09 8.4E-14 99.2 9.9 104 165-274 51-158 (392)
267 1m6y_A S-adenosyl-methyltransf 98.9 1.5E-09 5E-14 97.4 8.0 86 156-245 16-106 (301)
268 2r6z_A UPF0341 protein in RSP 98.9 1.1E-09 3.9E-14 96.1 7.2 88 158-249 75-173 (258)
269 3v97_A Ribosomal RNA large sub 98.9 7.8E-09 2.7E-13 103.1 12.2 127 149-277 173-350 (703)
270 3lkd_A Type I restriction-modi 98.9 4.5E-08 1.5E-12 94.5 16.4 148 129-277 175-361 (542)
271 3khk_A Type I restriction-modi 98.9 9.5E-09 3.2E-13 99.4 11.3 146 129-277 203-398 (544)
272 3o4f_A Spermidine synthase; am 98.8 2.3E-07 8E-12 82.2 17.5 112 166-277 83-201 (294)
273 4gqb_A Protein arginine N-meth 98.8 1.2E-08 4.2E-13 99.5 9.8 100 167-271 358-464 (637)
274 3ftd_A Dimethyladenosine trans 98.8 1.8E-08 6E-13 88.0 9.9 76 152-235 17-92 (249)
275 3uzu_A Ribosomal RNA small sub 98.8 1.8E-08 6.3E-13 89.3 9.7 78 151-235 27-106 (279)
276 2qy6_A UPF0209 protein YFCK; s 98.8 9.6E-09 3.3E-13 90.0 7.6 128 166-319 60-232 (257)
277 1m6e_X S-adenosyl-L-methionnin 98.8 1.5E-08 5.2E-13 92.5 9.0 150 167-318 52-276 (359)
278 3cvo_A Methyltransferase-like 98.8 2.4E-07 8.1E-12 77.8 15.4 111 154-274 20-154 (202)
279 1qyr_A KSGA, high level kasuga 98.7 7E-09 2.4E-13 90.7 5.3 87 152-245 7-98 (252)
280 3evf_A RNA-directed RNA polyme 98.7 3.3E-08 1.1E-12 86.0 7.8 110 162-277 70-187 (277)
281 3ll7_A Putative methyltransfer 98.7 1.8E-08 6E-13 93.7 5.7 74 166-244 93-170 (410)
282 3ua3_A Protein arginine N-meth 98.7 8E-08 2.7E-12 93.8 10.1 101 167-271 410-531 (745)
283 2oyr_A UPF0341 protein YHIQ; a 98.6 3.1E-08 1.1E-12 86.6 6.3 110 156-268 76-194 (258)
284 3s1s_A Restriction endonucleas 98.6 5.7E-07 1.9E-11 89.2 13.6 132 146-277 295-468 (878)
285 4fzv_A Putative methyltransfer 98.5 7.6E-07 2.6E-11 81.4 11.7 134 156-289 138-299 (359)
286 3gcz_A Polyprotein; flavivirus 98.4 1.2E-07 4.1E-12 82.6 4.2 109 163-277 87-204 (282)
287 4auk_A Ribosomal RNA large sub 98.4 5.8E-06 2E-10 75.2 15.0 122 165-316 210-334 (375)
288 2wk1_A NOVP; transferase, O-me 98.4 1.1E-06 3.9E-11 77.5 9.3 130 165-317 105-267 (282)
289 3ufb_A Type I restriction-modi 98.4 7.9E-06 2.7E-10 78.8 15.2 146 129-277 176-365 (530)
290 2jny_A Uncharacterized BCR; st 98.3 3E-07 1E-11 62.2 2.4 45 57-110 7-51 (67)
291 2jr6_A UPF0434 protein NMA0874 98.2 3.7E-07 1.3E-11 62.0 2.2 44 57-109 5-48 (68)
292 2hf1_A Tetraacyldisaccharide-1 98.2 3.5E-07 1.2E-11 62.1 2.1 44 57-109 5-48 (68)
293 2js4_A UPF0434 protein BB2007; 98.2 3.9E-07 1.3E-11 62.3 2.3 45 57-110 5-49 (70)
294 2pk7_A Uncharacterized protein 98.2 4.1E-07 1.4E-11 62.0 2.1 44 57-109 5-48 (69)
295 1wg8_A Predicted S-adenosylmet 98.2 3.8E-06 1.3E-10 73.5 8.2 80 156-244 12-96 (285)
296 3c6k_A Spermine synthase; sper 98.2 4.5E-06 1.6E-10 76.2 8.2 108 166-274 205-331 (381)
297 2k4m_A TR8_protein, UPF0146 pr 98.1 3.8E-06 1.3E-10 65.9 6.4 88 166-278 35-125 (153)
298 3eld_A Methyltransferase; flav 98.1 3.6E-06 1.2E-10 73.8 6.8 106 165-276 80-193 (300)
299 2vz8_A Fatty acid synthase; tr 98.1 4.3E-07 1.5E-11 101.7 1.0 147 166-319 1240-1392(2512)
300 3lkz_A Non-structural protein 98.0 4.6E-05 1.6E-09 66.5 11.2 110 162-278 90-208 (321)
301 2kpi_A Uncharacterized protein 98.0 2.6E-06 8.8E-11 55.6 2.4 43 57-110 7-51 (56)
302 1rjd_A PPM1P, carboxy methyl t 97.9 0.00029 9.8E-09 63.8 14.8 158 156-315 87-281 (334)
303 2k5r_A Uncharacterized protein 97.9 4.7E-06 1.6E-10 60.4 2.4 53 57-109 5-75 (97)
304 2zig_A TTHA0409, putative modi 97.9 5.3E-05 1.8E-09 67.6 9.4 62 149-213 219-280 (297)
305 3p8z_A Mtase, non-structural p 97.8 0.00011 3.7E-09 62.2 10.0 108 163-278 75-190 (267)
306 2px2_A Genome polyprotein [con 97.7 6.4E-05 2.2E-09 64.5 7.4 103 164-277 71-186 (269)
307 3tka_A Ribosomal RNA small sub 97.5 8.8E-05 3E-09 66.4 5.4 82 156-244 47-135 (347)
308 2uyo_A Hypothetical protein ML 97.5 0.0014 4.7E-08 58.7 13.0 147 168-317 104-274 (310)
309 3vyw_A MNMC2; tRNA wobble urid 97.4 0.0022 7.6E-08 56.8 13.2 140 165-331 95-258 (308)
310 1i4w_A Mitochondrial replicati 97.4 0.00065 2.2E-08 61.8 9.2 75 151-231 37-117 (353)
311 1g60_A Adenine-specific methyl 97.3 0.00073 2.5E-08 58.9 8.7 63 149-214 196-258 (260)
312 3r24_A NSP16, 2'-O-methyl tran 97.1 0.0012 4E-08 57.7 7.6 96 164-277 107-220 (344)
313 1pft_A TFIIB, PFTFIIBN; N-term 96.6 0.0014 4.8E-08 41.6 3.2 34 58-100 3-37 (50)
314 1g55_A DNA cytosine methyltran 96.5 0.013 4.5E-07 53.0 9.9 125 168-319 3-146 (343)
315 2oo3_A Protein involved in cat 96.4 0.0024 8.4E-08 55.8 4.0 106 166-278 91-202 (283)
316 3s2e_A Zinc-containing alcohol 96.3 0.023 7.8E-07 51.2 10.1 99 161-275 161-264 (340)
317 3qv2_A 5-cytosine DNA methyltr 96.3 0.044 1.5E-06 49.2 11.8 127 167-319 10-157 (327)
318 3g7u_A Cytosine-specific methy 96.1 0.039 1.3E-06 50.6 11.0 71 168-247 3-81 (376)
319 1f8f_A Benzyl alcohol dehydrog 96.1 0.022 7.4E-07 52.1 9.1 100 161-275 185-290 (371)
320 1kol_A Formaldehyde dehydrogen 96.0 0.051 1.8E-06 50.0 11.5 103 162-274 181-300 (398)
321 3two_A Mannitol dehydrogenase; 96.0 0.038 1.3E-06 49.9 10.3 95 162-276 172-267 (348)
322 3iei_A Leucine carboxyl methyl 96.0 0.53 1.8E-05 42.2 17.5 160 156-320 79-279 (334)
323 2dph_A Formaldehyde dismutase; 95.9 0.035 1.2E-06 51.2 9.8 105 160-274 179-299 (398)
324 4eez_A Alcohol dehydrogenase 1 95.9 0.07 2.4E-06 48.0 11.5 99 162-275 159-264 (348)
325 2py6_A Methyltransferase FKBM; 95.8 0.026 9E-07 52.4 8.4 64 165-230 225-293 (409)
326 3uog_A Alcohol dehydrogenase; 95.5 0.093 3.2E-06 47.6 10.9 99 161-276 184-289 (363)
327 3pvc_A TRNA 5-methylaminomethy 95.4 0.045 1.5E-06 54.3 9.1 127 166-319 58-230 (689)
328 1pqw_A Polyketide synthase; ro 95.4 0.05 1.7E-06 44.7 7.9 94 162-275 34-138 (198)
329 3q87_A Putative uncharacterize 95.3 0.0049 1.7E-07 46.7 1.3 28 82-109 94-121 (125)
330 4ej6_A Putative zinc-binding d 95.3 0.29 9.8E-06 44.5 13.4 102 160-276 176-286 (370)
331 3tos_A CALS11; methyltransfera 95.3 0.086 2.9E-06 45.5 9.1 107 167-276 70-219 (257)
332 1pl8_A Human sorbitol dehydrog 95.2 0.087 3E-06 47.7 9.6 100 161-275 166-274 (356)
333 1boo_A Protein (N-4 cytosine-s 95.2 0.045 1.5E-06 49.0 7.5 62 149-213 236-297 (323)
334 3ps9_A TRNA 5-methylaminomethy 95.2 0.046 1.6E-06 54.1 8.2 126 167-319 67-238 (676)
335 3fpc_A NADP-dependent alcohol 95.2 0.066 2.3E-06 48.4 8.6 101 160-275 160-267 (352)
336 2c7p_A Modification methylase 95.1 0.42 1.4E-05 42.7 13.7 126 167-319 11-150 (327)
337 1eg2_A Modification methylase 95.1 0.061 2.1E-06 48.1 8.1 62 149-213 226-290 (319)
338 3m6i_A L-arabinitol 4-dehydrog 95.1 0.31 1.1E-05 44.1 13.0 104 160-276 173-285 (363)
339 1uuf_A YAHK, zinc-type alcohol 95.0 0.08 2.7E-06 48.3 8.8 93 163-274 191-288 (369)
340 1e3j_A NADP(H)-dependent ketos 95.0 0.23 8E-06 44.7 11.9 99 161-275 163-272 (352)
341 1rjw_A ADH-HT, alcohol dehydro 95.0 0.21 7.1E-06 44.8 11.4 95 163-275 161-262 (339)
342 2b5w_A Glucose dehydrogenase; 94.9 0.21 7.2E-06 45.1 11.3 90 168-276 174-275 (357)
343 3uko_A Alcohol dehydrogenase c 94.7 0.11 3.8E-06 47.4 8.8 101 160-275 187-296 (378)
344 3goh_A Alcohol dehydrogenase, 94.7 0.055 1.9E-06 48.1 6.5 93 160-274 136-229 (315)
345 3qwb_A Probable quinone oxidor 94.7 0.18 6.3E-06 45.0 10.1 96 163-275 145-248 (334)
346 1jvb_A NAD(H)-dependent alcoho 94.6 0.19 6.4E-06 45.2 9.9 97 162-275 166-272 (347)
347 4b7c_A Probable oxidoreductase 94.5 0.13 4.6E-06 45.9 8.9 100 160-275 143-249 (336)
348 1vq8_Z 50S ribosomal protein L 94.5 0.011 3.8E-07 41.5 1.2 31 59-98 26-56 (83)
349 2zwa_A Leucine carboxyl methyl 94.5 1.3 4.4E-05 43.8 16.6 162 156-320 94-307 (695)
350 1v3u_A Leukotriene B4 12- hydr 94.4 0.18 6.3E-06 45.0 9.5 95 161-274 140-244 (333)
351 1p0f_A NADP-dependent alcohol 94.4 0.17 6E-06 45.9 9.4 100 161-275 186-294 (373)
352 4dvj_A Putative zinc-dependent 94.4 0.17 5.8E-06 45.9 9.2 92 166-273 171-269 (363)
353 4a2c_A Galactitol-1-phosphate 94.3 0.44 1.5E-05 42.6 11.8 102 160-276 154-262 (346)
354 3gms_A Putative NADPH:quinone 94.3 0.1 3.5E-06 46.8 7.6 99 160-275 138-244 (340)
355 2jhf_A Alcohol dehydrogenase E 94.3 0.24 8.2E-06 45.0 10.2 99 161-274 186-293 (374)
356 1cdo_A Alcohol dehydrogenase; 94.3 0.27 9.2E-06 44.7 10.4 100 161-275 187-295 (374)
357 2zig_A TTHA0409, putative modi 94.2 0.088 3E-06 46.5 6.7 92 219-319 20-133 (297)
358 3jyn_A Quinone oxidoreductase; 94.2 0.17 5.7E-06 45.1 8.6 98 162-276 136-241 (325)
359 1e3i_A Alcohol dehydrogenase, 94.2 0.27 9.4E-06 44.7 10.2 100 161-275 190-298 (376)
360 3jv7_A ADH-A; dehydrogenase, n 94.1 0.22 7.5E-06 44.7 9.4 97 163-275 168-271 (345)
361 3ip1_A Alcohol dehydrogenase, 94.1 0.29 9.9E-06 45.1 10.3 100 163-276 210-320 (404)
362 2h6e_A ADH-4, D-arabinose 1-de 94.0 0.18 6E-06 45.4 8.6 96 163-275 168-270 (344)
363 3j20_Y 30S ribosomal protein S 94.0 0.023 7.8E-07 35.8 1.8 35 55-98 14-48 (50)
364 2fzw_A Alcohol dehydrogenase c 93.9 0.21 7.2E-06 45.4 8.8 99 161-274 185-292 (373)
365 2d8a_A PH0655, probable L-thre 93.8 0.29 9.9E-06 44.0 9.5 98 162-275 164-268 (348)
366 2qrv_A DNA (cytosine-5)-methyl 93.7 0.13 4.6E-06 45.3 6.9 71 166-244 15-90 (295)
367 1yb5_A Quinone oxidoreductase; 93.6 0.34 1.2E-05 43.7 9.7 94 162-274 166-269 (351)
368 2c0c_A Zinc binding alcohol de 93.6 0.4 1.4E-05 43.4 10.2 99 160-275 157-262 (362)
369 1dl6_A Transcription factor II 93.6 0.051 1.7E-06 35.4 2.9 30 59-97 10-40 (58)
370 2j3h_A NADP-dependent oxidored 93.5 0.29 9.9E-06 43.8 9.0 97 161-275 150-256 (345)
371 1vj0_A Alcohol dehydrogenase, 93.3 0.21 7E-06 45.7 7.8 99 162-275 190-299 (380)
372 4h0n_A DNMT2; SAH binding, tra 93.3 0.12 4.2E-06 46.4 6.0 127 168-319 4-146 (333)
373 4eye_A Probable oxidoreductase 93.3 0.17 5.8E-06 45.5 7.0 97 160-274 153-257 (342)
374 2k5c_A Uncharacterized protein 93.2 0.014 4.7E-07 40.0 -0.3 39 59-97 7-61 (95)
375 1zkd_A DUF185; NESG, RPR58, st 93.1 0.55 1.9E-05 42.9 10.1 45 167-211 81-132 (387)
376 3fbg_A Putative arginate lyase 93.0 0.49 1.7E-05 42.4 9.7 91 166-273 150-247 (346)
377 3nx4_A Putative oxidoreductase 92.9 0.46 1.6E-05 42.1 9.3 90 169-275 149-242 (324)
378 2eih_A Alcohol dehydrogenase; 92.9 0.5 1.7E-05 42.3 9.5 94 163-275 163-266 (343)
379 2hcy_A Alcohol dehydrogenase 1 92.8 0.28 9.6E-06 44.1 7.8 95 163-275 166-270 (347)
380 1qyp_A RNA polymerase II; tran 92.7 0.048 1.7E-06 35.3 1.8 41 59-99 14-55 (57)
381 3me5_A Cytosine-specific methy 92.6 0.74 2.5E-05 43.5 10.5 73 153-231 68-146 (482)
382 1boo_A Protein (N-4 cytosine-s 92.5 0.25 8.7E-06 44.1 7.0 88 219-318 13-116 (323)
383 2cf5_A Atccad5, CAD, cinnamyl 92.5 0.21 7.2E-06 45.1 6.5 98 163-275 176-276 (357)
384 2j6a_A Protein TRM112; transla 92.4 0.034 1.1E-06 43.0 0.9 27 83-109 105-131 (141)
385 1yqd_A Sinapyl alcohol dehydro 92.3 0.25 8.6E-06 44.8 6.8 98 163-275 183-283 (366)
386 2cdc_A Glucose dehydrogenase g 92.3 0.72 2.5E-05 41.7 9.8 88 167-275 181-279 (366)
387 3jyw_9 60S ribosomal protein L 92.2 0.08 2.7E-06 35.8 2.4 31 59-98 25-55 (72)
388 3tqh_A Quinone oxidoreductase; 92.2 0.68 2.3E-05 41.0 9.4 97 160-274 146-245 (321)
389 4dup_A Quinone oxidoreductase; 92.2 0.37 1.3E-05 43.5 7.7 97 162-275 163-266 (353)
390 1piw_A Hypothetical zinc-type 92.1 0.17 5.8E-06 45.8 5.4 98 162-274 175-276 (360)
391 2akl_A PHNA-like protein PA012 92.0 0.085 2.9E-06 39.7 2.6 30 59-98 26-55 (138)
392 3ubt_Y Modification methylase 92.0 1.4 4.7E-05 39.1 11.2 125 169-319 2-140 (331)
393 3krt_A Crotonyl COA reductase; 92.0 0.78 2.7E-05 42.9 9.9 95 163-274 225-344 (456)
394 1qor_A Quinone oxidoreductase; 91.9 0.33 1.1E-05 43.1 7.0 95 162-275 136-240 (327)
395 3ius_A Uncharacterized conserv 91.8 2.1 7.1E-05 36.7 12.0 70 168-253 6-79 (286)
396 2j8z_A Quinone oxidoreductase; 91.6 0.6 2.1E-05 42.0 8.4 95 162-275 158-262 (354)
397 2dq4_A L-threonine 3-dehydroge 91.6 0.27 9.3E-06 44.1 6.1 95 161-275 160-263 (343)
398 3gaz_A Alcohol dehydrogenase s 91.5 0.72 2.5E-05 41.3 8.8 94 161-274 145-246 (343)
399 3fwz_A Inner membrane protein 91.4 3.4 0.00012 31.4 11.6 91 167-274 7-105 (140)
400 1wly_A CAAR, 2-haloacrylate re 91.3 0.62 2.1E-05 41.5 8.1 95 162-275 141-245 (333)
401 2k4x_A 30S ribosomal protein S 91.2 0.12 4E-06 33.2 2.3 36 54-98 12-47 (55)
402 2jne_A Hypothetical protein YF 91.1 0.11 3.8E-06 37.0 2.2 28 59-97 31-58 (101)
403 1tfi_A Transcriptional elongat 91.0 0.1 3.4E-06 32.8 1.7 41 58-98 7-48 (50)
404 4f3n_A Uncharacterized ACR, CO 90.8 0.74 2.5E-05 42.7 8.1 46 167-212 138-188 (432)
405 3j21_i 50S ribosomal protein L 90.7 0.079 2.7E-06 36.9 1.2 30 60-98 35-64 (83)
406 1iz0_A Quinone oxidoreductase; 90.6 0.34 1.2E-05 42.5 5.6 93 164-274 123-218 (302)
407 2zb4_A Prostaglandin reductase 90.4 1.3 4.4E-05 39.8 9.4 98 160-275 152-261 (357)
408 4a0s_A Octenoyl-COA reductase/ 90.3 1.4 5E-05 40.8 9.9 96 162-274 216-336 (447)
409 3iz5_m 60S ribosomal protein L 90.0 0.099 3.4E-06 37.1 1.2 32 59-99 35-66 (92)
410 3cc2_Z 50S ribosomal protein L 90.0 0.097 3.3E-06 38.7 1.2 31 59-98 59-89 (116)
411 2vhw_A Alanine dehydrogenase; 89.8 0.22 7.4E-06 45.6 3.7 102 165-274 166-268 (377)
412 3ggo_A Prephenate dehydrogenas 89.6 2.5 8.4E-05 37.4 10.4 91 168-272 34-126 (314)
413 1twf_L ABC10-alpha, DNA-direct 89.6 0.18 6.2E-06 34.0 2.2 30 57-96 25-54 (70)
414 2jrp_A Putative cytoplasmic pr 89.4 0.17 5.9E-06 35.0 2.0 26 61-97 3-28 (81)
415 3o26_A Salutaridine reductase; 89.4 4.2 0.00014 35.1 11.8 78 166-248 11-102 (311)
416 4a17_Y RPL37A, 60S ribosomal p 89.3 0.11 3.6E-06 37.6 0.9 32 59-99 35-66 (103)
417 3izc_m 60S ribosomal protein R 89.2 0.12 4E-06 36.7 1.1 32 59-99 35-66 (92)
418 1pjc_A Protein (L-alanine dehy 89.1 0.31 1.1E-05 44.2 4.2 102 166-275 166-268 (361)
419 3o38_A Short chain dehydrogena 89.1 3.1 0.00011 35.3 10.5 78 166-248 21-112 (266)
420 3oig_A Enoyl-[acyl-carrier-pro 89.1 2.3 7.9E-05 36.1 9.7 106 166-276 6-149 (266)
421 4eso_A Putative oxidoreductase 89.0 2.1 7.1E-05 36.4 9.3 101 166-275 7-139 (255)
422 3ioy_A Short-chain dehydrogena 89.0 3.7 0.00013 36.2 11.2 79 166-248 7-98 (319)
423 2vn8_A Reticulon-4-interacting 88.8 1.4 4.7E-05 40.0 8.4 95 164-274 181-280 (375)
424 1h2b_A Alcohol dehydrogenase; 88.7 2.4 8.2E-05 38.1 9.9 98 162-275 182-286 (359)
425 3swr_A DNA (cytosine-5)-methyl 88.7 4.1 0.00014 41.9 12.4 71 167-246 540-627 (1002)
426 1tt7_A YHFP; alcohol dehydroge 88.7 0.79 2.7E-05 40.7 6.5 95 164-275 147-248 (330)
427 1ffk_W Ribosomal protein L37AE 88.5 0.13 4.4E-06 34.9 0.9 31 59-98 26-56 (73)
428 1wii_A Hypothetical UPF0222 pr 88.4 0.13 4.6E-06 36.1 1.0 42 56-100 19-60 (85)
429 3grk_A Enoyl-(acyl-carrier-pro 88.4 3.8 0.00013 35.6 10.7 104 166-276 30-171 (293)
430 1gh9_A 8.3 kDa protein (gene M 88.2 0.23 7.8E-06 33.6 2.0 32 60-102 4-35 (71)
431 4dcm_A Ribosomal RNA large sub 87.9 2.7 9.1E-05 38.2 9.6 112 156-277 27-139 (375)
432 1xa0_A Putative NADPH dependen 87.8 0.81 2.8E-05 40.6 6.0 95 164-275 146-247 (328)
433 2eez_A Alanine dehydrogenase; 87.8 0.37 1.3E-05 43.9 3.7 102 165-274 164-266 (369)
434 3iht_A S-adenosyl-L-methionine 87.3 1.6 5.4E-05 34.3 6.5 32 167-198 41-72 (174)
435 3e8x_A Putative NAD-dependent 87.2 9.6 0.00033 31.4 12.2 75 166-253 20-100 (236)
436 3po3_S Transcription elongatio 87.2 0.41 1.4E-05 38.7 3.3 41 58-98 135-176 (178)
437 3p2y_A Alanine dehydrogenase/p 86.6 0.2 6.9E-06 45.7 1.3 97 166-273 183-301 (381)
438 3tjr_A Short chain dehydrogena 85.9 4.5 0.00015 35.2 9.7 78 165-248 29-119 (301)
439 3ijr_A Oxidoreductase, short c 85.9 7.1 0.00024 33.7 11.0 104 166-275 46-183 (291)
440 4dio_A NAD(P) transhydrogenase 85.8 0.42 1.4E-05 44.0 3.0 98 166-274 189-312 (405)
441 3gqv_A Enoyl reductase; medium 85.7 3.2 0.00011 37.4 8.9 93 165-274 163-263 (371)
442 3pxx_A Carveol dehydrogenase; 85.4 5.7 0.00019 34.0 10.1 104 166-275 9-154 (287)
443 3j21_g 50S ribosomal protein L 85.2 0.43 1.5E-05 29.9 1.9 26 59-97 13-38 (51)
444 3c85_A Putative glutathione-re 85.1 5.8 0.0002 31.5 9.4 91 167-274 39-139 (183)
445 3llv_A Exopolyphosphatase-rela 84.9 5.6 0.00019 30.0 8.8 90 167-274 6-103 (141)
446 3h0g_I DNA-directed RNA polyme 84.8 0.94 3.2E-05 33.7 4.0 41 58-98 70-111 (113)
447 2gdz_A NAD+-dependent 15-hydro 84.6 7.7 0.00026 32.8 10.5 105 167-275 7-140 (267)
448 1zsy_A Mitochondrial 2-enoyl t 84.4 6.1 0.00021 35.3 10.1 96 162-274 163-270 (357)
449 3h0g_L DNA-directed RNA polyme 84.4 0.76 2.6E-05 30.2 2.9 32 58-99 19-50 (63)
450 3h0g_I DNA-directed RNA polyme 84.3 0.81 2.8E-05 34.0 3.4 38 60-102 4-41 (113)
451 3is3_A 17BETA-hydroxysteroid d 83.9 9.7 0.00033 32.3 10.8 105 166-276 17-154 (270)
452 1lss_A TRK system potassium up 83.8 10 0.00034 28.1 9.8 90 168-272 5-100 (140)
453 4fs3_A Enoyl-[acyl-carrier-pro 83.7 5.9 0.0002 33.6 9.2 106 166-276 5-148 (256)
454 1xg5_A ARPG836; short chain de 83.5 17 0.00057 30.9 12.2 79 166-248 31-122 (279)
455 3ce6_A Adenosylhomocysteinase; 83.5 2.8 9.7E-05 39.6 7.6 90 164-274 271-361 (494)
456 3ek2_A Enoyl-(acyl-carrier-pro 83.4 6.7 0.00023 33.1 9.6 105 165-276 12-155 (271)
457 1x13_A NAD(P) transhydrogenase 83.3 0.52 1.8E-05 43.4 2.4 43 165-208 170-213 (401)
458 3pi7_A NADH oxidoreductase; gr 83.2 1.9 6.6E-05 38.5 6.2 90 168-274 166-263 (349)
459 4egf_A L-xylulose reductase; s 83.1 7.8 0.00027 32.9 9.9 79 166-249 19-110 (266)
460 1wma_A Carbonyl reductase [NAD 82.8 5.6 0.00019 33.5 8.8 102 167-275 4-139 (276)
461 3f9i_A 3-oxoacyl-[acyl-carrier 82.7 12 0.00041 31.1 10.8 75 165-248 12-95 (249)
462 1l7d_A Nicotinamide nucleotide 82.7 0.69 2.4E-05 42.3 3.0 43 165-208 170-213 (384)
463 3r3s_A Oxidoreductase; structu 82.7 8.2 0.00028 33.4 9.9 105 166-276 48-187 (294)
464 3r6d_A NAD-dependent epimerase 82.6 11 0.00038 30.6 10.4 135 169-318 7-151 (221)
465 3v2g_A 3-oxoacyl-[acyl-carrier 82.6 12 0.0004 31.9 10.8 104 166-275 30-166 (271)
466 3tsc_A Putative oxidoreductase 82.6 11 0.00038 32.0 10.7 78 166-249 10-113 (277)
467 3k31_A Enoyl-(acyl-carrier-pro 82.1 5.3 0.00018 34.7 8.5 104 166-276 29-170 (296)
468 3t7c_A Carveol dehydrogenase; 81.8 15 0.00052 31.7 11.4 77 166-248 27-128 (299)
469 3ga8_A HTH-type transcriptiona 81.8 0.26 8.9E-06 34.0 -0.2 41 60-100 2-49 (78)
470 4fgs_A Probable dehydrogenase 81.5 8.3 0.00028 33.3 9.3 102 165-275 27-160 (273)
471 4da9_A Short-chain dehydrogena 81.0 13 0.00044 31.8 10.5 77 165-247 27-117 (280)
472 4e6p_A Probable sorbitol dehyd 80.8 9.6 0.00033 32.1 9.5 74 166-248 7-93 (259)
473 4imr_A 3-oxoacyl-(acyl-carrier 80.8 9.8 0.00033 32.5 9.6 76 166-247 32-119 (275)
474 3gvc_A Oxidoreductase, probabl 80.4 9.9 0.00034 32.6 9.6 75 166-249 28-115 (277)
475 3l77_A Short-chain alcohol deh 80.1 13 0.00044 30.6 10.0 78 167-249 2-92 (235)
476 2f1k_A Prephenate dehydrogenas 80.0 7.9 0.00027 33.0 8.8 85 169-271 2-88 (279)
477 3edm_A Short chain dehydrogena 80.0 4.5 0.00015 34.3 7.1 104 166-275 7-144 (259)
478 3uve_A Carveol dehydrogenase ( 79.9 15 0.00052 31.3 10.7 77 166-248 10-115 (286)
479 4ft4_B DNA (cytosine-5)-methyl 79.8 17 0.00058 36.3 12.3 43 167-209 212-259 (784)
480 3qt1_I DNA-directed RNA polyme 79.7 1.5 5E-05 33.6 3.4 36 62-102 26-61 (133)
481 3b1f_A Putative prephenate deh 79.5 9.2 0.00031 32.9 9.1 89 168-271 7-98 (290)
482 1ja9_A 4HNR, 1,3,6,8-tetrahydr 79.5 4.8 0.00016 34.1 7.2 77 166-248 20-110 (274)
483 3t4x_A Oxidoreductase, short c 79.2 15 0.00053 31.0 10.4 79 166-248 9-96 (267)
484 1xhl_A Short-chain dehydrogena 79.2 11 0.00039 32.5 9.6 79 166-247 25-116 (297)
485 3k1f_M Transcription initiatio 79.1 0.9 3.1E-05 36.2 2.0 31 58-97 19-52 (197)
486 4a27_A Synaptic vesicle membra 78.8 2.8 9.7E-05 37.4 5.7 97 160-275 136-239 (349)
487 2g5c_A Prephenate dehydrogenas 78.8 7.7 0.00026 33.2 8.3 89 169-272 3-94 (281)
488 1pqv_S STP-alpha, transcriptio 78.5 0.78 2.7E-05 40.6 1.8 41 57-97 265-306 (309)
489 2km1_A Protein DRE2; yeast, an 78.3 1.9 6.3E-05 33.1 3.6 40 233-272 55-96 (136)
490 4g81_D Putative hexonate dehyd 78.3 15 0.00052 31.2 9.9 78 166-249 8-98 (255)
491 1twf_I B12.6, DNA-directed RNA 77.8 1.4 4.7E-05 33.2 2.7 41 59-99 71-112 (122)
492 4esj_A Type-2 restriction enzy 77.7 0.92 3.2E-05 37.9 1.8 45 47-97 17-66 (257)
493 3sx2_A Putative 3-ketoacyl-(ac 77.2 11 0.00039 32.0 8.9 79 166-250 12-115 (278)
494 2hwk_A Helicase NSP2; rossman 77.1 5 0.00017 34.8 6.2 57 220-277 189-257 (320)
495 1geg_A Acetoin reductase; SDR 77.0 11 0.00039 31.5 8.8 74 168-247 3-89 (256)
496 3flo_B DNA polymerase alpha ca 76.9 1.5 5.3E-05 36.2 3.0 41 57-97 19-59 (206)
497 3lvj_C Sulfurtransferase TUSA; 76.9 9.9 0.00034 26.1 6.8 56 251-328 21-77 (82)
498 3l9w_A Glutathione-regulated p 76.9 11 0.00038 34.6 9.1 94 167-277 4-105 (413)
499 3u5t_A 3-oxoacyl-[acyl-carrier 76.6 14 0.00049 31.3 9.4 104 166-275 26-162 (267)
500 3c24_A Putative oxidoreductase 76.5 13 0.00045 31.8 9.2 84 168-271 12-98 (286)
No 1
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.93 E-value=3.7e-26 Score=215.97 Aligned_cols=168 Identities=11% Similarity=0.156 Sum_probs=125.9
Q ss_pred HHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCC
Q 019957 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (333)
Q Consensus 154 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~ 233 (333)
..+.+.+.+...++.+|||||||+|.++..+++.+. +++|+|+|+.+++.|+++ +.. .....+...+...+++
T Consensus 95 ~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~--~v~gvD~s~~~~~~a~~~----~~~-~~~~~~~~~~~~~l~~ 167 (416)
T 4e2x_A 95 LARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGV--RHLGFEPSSGVAAKAREK----GIR-VRTDFFEKATADDVRR 167 (416)
T ss_dssp HHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTC--EEEEECCCHHHHHHHHTT----TCC-EECSCCSHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCC--cEEEECCCHHHHHHHHHc----CCC-cceeeechhhHhhccc
Confidence 445566666666788999999999999999999876 999999999999999874 110 0011122344455666
Q ss_pred CCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCC
Q 019957 234 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCG 313 (333)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aG 313 (333)
.+++||+|++.++++|++|+..++++++++|||||++++.+++..... ....+......|..+++.+++..+++++|
T Consensus 168 ~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~---~~~~~~~~~~~~~~~~s~~~l~~ll~~aG 244 (416)
T 4e2x_A 168 TEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPYLGDIV---AKTSFDQIFDEHFFLFSATSVQGMAQRCG 244 (416)
T ss_dssp HHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEECHHHHH---HHTCGGGCSTTCCEECCHHHHHHHHHHTT
T ss_pred CCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCChHHhh---hhcchhhhhhhhhhcCCHHHHHHHHHHcC
Confidence 678999999999999999999999999999999999999987642100 00111122247788999999999999999
Q ss_pred CcEEEEEE----eCeEEEEEEe
Q 019957 314 LTNYTSKV----QQSFIMFAAQ 331 (333)
Q Consensus 314 f~~v~~~~----~~~~~~~~a~ 331 (333)
|++++... .+.+.++.++
T Consensus 245 f~~~~~~~~~~~~g~l~~~~~~ 266 (416)
T 4e2x_A 245 FELVDVQRLPVHGGEVRYTLAR 266 (416)
T ss_dssp EEEEEEEEECGGGSEEEEEEEE
T ss_pred CEEEEEEEccCCCCEEEEEEEe
Confidence 99988755 3455555554
No 2
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.92 E-value=6.9e-24 Score=187.77 Aligned_cols=181 Identities=15% Similarity=0.184 Sum_probs=138.3
Q ss_pred CCcHHHHHHHHHhhc--ccCCCeEEEEcCCcCHHHHHHHHhC--CCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEE
Q 019957 149 PGPDEEFKMAQEYFK--SAQGGLLVDVSCGSGLFSRKFAKSG--TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 224 (333)
Q Consensus 149 ~~~~~~~~~~~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~--~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~ 224 (333)
|...+..+.+..++. ..++.+|||||||+|.++..+++.. ++.+|+|+|+|+.|++.|++++...+. ..++.++
T Consensus 51 P~Y~~~~~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~--~~~v~~~ 128 (261)
T 4gek_A 51 PGYSNIISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKA--PTPVDVI 128 (261)
T ss_dssp TTHHHHHHHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCC--SSCEEEE
T ss_pred CCHHHHHHHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhcc--CceEEEe
Confidence 445555555444433 3568899999999999999999874 356899999999999999999988764 5689999
Q ss_pred EccCCCCCCCCCCcceEEeccccccCCCh--HHHHHHHHHhccCCcEEEEEEecccCCCc--chhhHHHHH---------
Q 019957 225 RADVCRLPFASGFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYTSST--SLTGRVLRE--------- 291 (333)
Q Consensus 225 ~~d~~~lp~~~~~fD~V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~--~~~~~~~~~--------- 291 (333)
++|+.++|++ .||+|++..+|+|++++ ..+|++++++|||||+|++.+........ ..+...+..
T Consensus 129 ~~D~~~~~~~--~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~~~~~~~~~~~~g~s~ 206 (261)
T 4gek_A 129 EGDIRDIAIE--NASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNMHHDFKRANGYSE 206 (261)
T ss_dssp ESCTTTCCCC--SEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHHHHHHHHHHHHTTGGG
T ss_pred eccccccccc--ccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999999864 69999999999999865 46899999999999999999876542110 111111100
Q ss_pred --------hhhccCCCCCHHHHHHHHHhCCCcEEEEE-EeCeEEEEEEeCC
Q 019957 292 --------RILQNYNYLTEEEIEDLCTSCGLTNYTSK-VQQSFIMFAAQKP 333 (333)
Q Consensus 292 --------~~~~~~~~~t~~~l~~ll~~aGf~~v~~~-~~~~~~~~~a~kp 333 (333)
........++.+++..+|+++||+.++++ ....|..++|.||
T Consensus 207 ~ei~~~~~~l~~~~~~~s~~~~~~~L~~AGF~~ve~~fq~~nF~~~iA~K~ 257 (261)
T 4gek_A 207 LEISQKRSMLENVMLTDSVETHKARLHKAGFEHSELWFQCFNFGSLVALKA 257 (261)
T ss_dssp STTHHHHHHHHHHCCCBCHHHHHHHHHHHTCSEEEEEEEETTEEEEEEECC
T ss_pred HHHHHHHhhhcccccCCCHHHHHHHHHHcCCCeEEEEEEeccEEEEEEEEc
Confidence 01123456789999999999999998874 4567888899986
No 3
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.92 E-value=5.4e-24 Score=182.77 Aligned_cols=177 Identities=21% Similarity=0.276 Sum_probs=138.9
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC
Q 019957 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (333)
Q Consensus 152 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (333)
....+.+.+.+...++ +|||+|||+|.++..+++. +..+++|+|+|+.+++.+++++...++ ..++.++.+|+.++
T Consensus 30 ~~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~ 105 (219)
T 3dlc_A 30 PIIAENIINRFGITAG-TCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANL--NDRIQIVQGDVHNI 105 (219)
T ss_dssp HHHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECBTTBC
T ss_pred HHHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccc--cCceEEEEcCHHHC
Confidence 3445566666665545 9999999999999999998 456999999999999999999988764 56899999999999
Q ss_pred CCCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHH-------HHHhhhccCCCCCHHH
Q 019957 232 PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRV-------LRERILQNYNYLTEEE 304 (333)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~t~~~ 304 (333)
++++++||+|++..+++|++++..+++++.++|||||.+++.+..........+... |......+...++.++
T Consensus 106 ~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (219)
T 3dlc_A 106 PIEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVER 185 (219)
T ss_dssp SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHH
T ss_pred CCCcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHH
Confidence 988899999999999999999999999999999999999998765432111111111 1111124566778999
Q ss_pred HHHHHHhCCCcEEEEEEeCeEEEEEEeC
Q 019957 305 IEDLCTSCGLTNYTSKVQQSFIMFAAQK 332 (333)
Q Consensus 305 l~~ll~~aGf~~v~~~~~~~~~~~~a~k 332 (333)
+.++++++||++++.........+..+|
T Consensus 186 ~~~~l~~aGf~~v~~~~~~~~~~~~~~k 213 (219)
T 3dlc_A 186 FQNVLDEIGISSYEIILGDEGFWIIISK 213 (219)
T ss_dssp HHHHHHHHTCSSEEEEEETTEEEEEEBC
T ss_pred HHHHHHHcCCCeEEEEecCCceEEEEec
Confidence 9999999999998876555444445554
No 4
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.91 E-value=2.6e-23 Score=179.05 Aligned_cols=165 Identities=15% Similarity=0.189 Sum_probs=138.7
Q ss_pred HHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCC
Q 019957 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA 234 (333)
Q Consensus 156 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~ 234 (333)
+.+.+.+...++.+|||+|||+|.++..+++.+ +..+++|+|+|+.+++.+++++...+ ..++.++.+|+..+++.
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~d~~~~~~~ 103 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLG---LKNVEVLKSEENKIPLP 103 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHT---CTTEEEEECBTTBCSSC
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC---CCcEEEEecccccCCCC
Confidence 445555666678899999999999999999885 56699999999999999999988776 45899999999999988
Q ss_pred CCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCC
Q 019957 235 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGL 314 (333)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf 314 (333)
+++||+|++..+++|++++..+++++.++|||||.+++.++....... ...+..+++.+++..+++++||
T Consensus 104 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~~~Gf 173 (219)
T 3dh0_A 104 DNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDK----------GPPPEEVYSEWEVGLILEDAGI 173 (219)
T ss_dssp SSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSS----------SCCGGGSCCHHHHHHHHHHTTC
T ss_pred CCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEeccccccc----------CCchhcccCHHHHHHHHHHCCC
Confidence 899999999999999999999999999999999999999877643211 1234567899999999999999
Q ss_pred cEEEEEE-eCeEEEEEEeCC
Q 019957 315 TNYTSKV-QQSFIMFAAQKP 333 (333)
Q Consensus 315 ~~v~~~~-~~~~~~~~a~kp 333 (333)
++++... ...+..++++|+
T Consensus 174 ~~~~~~~~~~~~~~~~~~k~ 193 (219)
T 3dh0_A 174 RVGRVVEVGKYCFGVYAMIV 193 (219)
T ss_dssp EEEEEEEETTTEEEEEEECC
T ss_pred EEEEEEeeCCceEEEEEEec
Confidence 9888644 445566777764
No 5
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.91 E-value=8.2e-23 Score=180.72 Aligned_cols=159 Identities=19% Similarity=0.271 Sum_probs=131.9
Q ss_pred HHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCC
Q 019957 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (333)
Q Consensus 156 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (333)
+.+.+.+...++.+|||||||+|.++..+++.++ +++|+|+|+.+++.+++++...+ .+++.++.+|+..+|+++
T Consensus 27 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~---~~~v~~~~~d~~~l~~~~ 101 (260)
T 1vl5_A 27 AKLMQIAALKGNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGNG---HQQVEYVQGDAEQMPFTD 101 (260)
T ss_dssp HHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHTT---CCSEEEEECCC-CCCSCT
T ss_pred HHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcC---CCceEEEEecHHhCCCCC
Confidence 5566666666788999999999999999999876 99999999999999999988766 458999999999999988
Q ss_pred CCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHH----hhhccCCCCCHHHHHHHHHh
Q 019957 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRE----RILQNYNYLTEEEIEDLCTS 311 (333)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~t~~~l~~ll~~ 311 (333)
++||+|++..+++|++|+..+|+++.++|||||.|++.++..... +.....+.. ..+.+..+++.+++.++|++
T Consensus 102 ~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 179 (260)
T 1vl5_A 102 ERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSAPEN--DAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEE 179 (260)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBCSS--HHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHH
T ss_pred CCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCCCC--HHHHHHHHHHHHhcCccccCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999988765422 221111111 22356778999999999999
Q ss_pred CCCcEEEEEE
Q 019957 312 CGLTNYTSKV 321 (333)
Q Consensus 312 aGf~~v~~~~ 321 (333)
+||+++....
T Consensus 180 aGf~~~~~~~ 189 (260)
T 1vl5_A 180 AGFELEELHC 189 (260)
T ss_dssp HTCEEEEEEE
T ss_pred CCCeEEEEEE
Confidence 9999877543
No 6
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.90 E-value=2.2e-22 Score=175.04 Aligned_cols=177 Identities=15% Similarity=0.229 Sum_probs=138.3
Q ss_pred cHHHHHHHHHhhc-ccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCC
Q 019957 151 PDEEFKMAQEYFK-SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVC 229 (333)
Q Consensus 151 ~~~~~~~~~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~ 229 (333)
.....+.+...+. ..++.+|||||||+|.++..+++.++..+++|+|+|+.+++.+++++.. ..++.++.+|+.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~~d~~ 102 (234)
T 3dtn_A 28 FDDFYGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRG-----NLKVKYIEADYS 102 (234)
T ss_dssp HHHHHHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCS-----CTTEEEEESCTT
T ss_pred HHHHHHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhcc-----CCCEEEEeCchh
Confidence 3444566666665 4467899999999999999999997777999999999999999998655 338999999999
Q ss_pred CCCCCCCCcceEEeccccccCCChH--HHHHHHHHhccCCcEEEEEEecccCCCc--chhhHHHHH--------------
Q 019957 230 RLPFASGFVDAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRYTSST--SLTGRVLRE-------------- 291 (333)
Q Consensus 230 ~lp~~~~~fD~V~~~~vl~h~~d~~--~~l~~~~r~LkpgG~l~i~~~~~~~~~~--~~~~~~~~~-------------- 291 (333)
++++. ++||+|++..+++|++++. .+++++.++|||||++++.++....... ......|..
T Consensus 103 ~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (234)
T 3dtn_A 103 KYDFE-EKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAA 181 (234)
T ss_dssp TCCCC-SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHT
T ss_pred ccCCC-CCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHH
Confidence 99876 8999999999999998776 5999999999999999999977642211 000111110
Q ss_pred --hhhccCCCCCHHHHHHHHHhCCCcEEEE-EEeCeEEEEEEeCC
Q 019957 292 --RILQNYNYLTEEEIEDLCTSCGLTNYTS-KVQQSFIMFAAQKP 333 (333)
Q Consensus 292 --~~~~~~~~~t~~~l~~ll~~aGf~~v~~-~~~~~~~~~~a~kp 333 (333)
....+...++.+++.++|+++||+++++ .....|.++.+.||
T Consensus 182 ~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~~~~~~~~~~~~~~ 226 (234)
T 3dtn_A 182 GYERSKLDKDIEMNQQLNWLKEAGFRDVSCIYKYYQFAVMFGRKT 226 (234)
T ss_dssp TC----CCCCCBHHHHHHHHHHTTCEEEEEEEEETTEEEEEEECC
T ss_pred HHHhcccccccCHHHHHHHHHHcCCCceeeeeeecceeEEEEEec
Confidence 0114566789999999999999999986 45677788887765
No 7
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.90 E-value=3.2e-22 Score=178.05 Aligned_cols=164 Identities=20% Similarity=0.236 Sum_probs=134.9
Q ss_pred HHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCC
Q 019957 155 FKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA 234 (333)
Q Consensus 155 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~ 234 (333)
.+.+.+.+...++.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.++++....++ ..++.++.+|+.++|++
T Consensus 50 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~~~~ 126 (273)
T 3bus_A 50 TDEMIALLDVRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGL--ANRVTFSYADAMDLPFE 126 (273)
T ss_dssp HHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCTTSCCSC
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCC--CcceEEEECccccCCCC
Confidence 3555666666678899999999999999999875 46999999999999999999888764 45799999999999988
Q ss_pred CCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHH--hhhccCCCCCHHHHHHHHHhC
Q 019957 235 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRE--RILQNYNYLTEEEIEDLCTSC 312 (333)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~t~~~l~~ll~~a 312 (333)
+++||+|++..+++|++++..+++++.++|||||++++.++.............+.. ....+...++.+++..+++++
T Consensus 127 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 206 (273)
T 3bus_A 127 DASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQA 206 (273)
T ss_dssp TTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHT
T ss_pred CCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHc
Confidence 899999999999999999999999999999999999999987643322221111111 122466789999999999999
Q ss_pred CCcEEEEEE
Q 019957 313 GLTNYTSKV 321 (333)
Q Consensus 313 Gf~~v~~~~ 321 (333)
||++++...
T Consensus 207 Gf~~~~~~~ 215 (273)
T 3bus_A 207 ELVVTSTVD 215 (273)
T ss_dssp TCEEEEEEE
T ss_pred CCeEEEEEE
Confidence 999987543
No 8
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.90 E-value=6.5e-22 Score=178.34 Aligned_cols=164 Identities=14% Similarity=0.148 Sum_probs=133.5
Q ss_pred HHHHHHHhh----cccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCC
Q 019957 154 EFKMAQEYF----KSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVC 229 (333)
Q Consensus 154 ~~~~~~~~l----~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~ 229 (333)
..+.+.+.+ ...++.+|||||||+|.++..+++.. ..+++|+|+|+.+++.++++....++ ..++.++.+|+.
T Consensus 66 ~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~ 142 (297)
T 2o57_A 66 TDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGL--ADNITVKYGSFL 142 (297)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTC--TTTEEEEECCTT
T ss_pred HHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCC--CcceEEEEcCcc
Confidence 345566666 55678899999999999999999873 23999999999999999999887764 568999999999
Q ss_pred CCCCCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHH
Q 019957 230 RLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLC 309 (333)
Q Consensus 230 ~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll 309 (333)
++|+++++||+|++..+++|++++..+|+++.++|||||++++.++.............+.... ....+.+.+++..++
T Consensus 143 ~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l 221 (297)
T 2o57_A 143 EIPCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRI-KLHDMGSLGLYRSLA 221 (297)
T ss_dssp SCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHH-TCSSCCCHHHHHHHH
T ss_pred cCCCCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHh-cCCCCCCHHHHHHHH
Confidence 9999899999999999999999999999999999999999999998765332222122222221 233467999999999
Q ss_pred HhCCCcEEEEEE
Q 019957 310 TSCGLTNYTSKV 321 (333)
Q Consensus 310 ~~aGf~~v~~~~ 321 (333)
+++||++++...
T Consensus 222 ~~aGf~~~~~~~ 233 (297)
T 2o57_A 222 KECGLVTLRTFS 233 (297)
T ss_dssp HHTTEEEEEEEE
T ss_pred HHCCCeEEEEEE
Confidence 999999988543
No 9
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.90 E-value=3.1e-22 Score=174.93 Aligned_cols=159 Identities=15% Similarity=0.233 Sum_probs=133.5
Q ss_pred HHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCC
Q 019957 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (333)
Q Consensus 156 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (333)
..+.+.+...++.+|||||||+|.++..+++.+. +++|+|+|+.+++.+++++...+ ..++.++.+|++.+++.+
T Consensus 11 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~~~~~ 85 (239)
T 1xxl_A 11 GLMIKTAECRAEHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVASSFAQEKG---VENVRFQQGTAESLPFPD 85 (239)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHHT---CCSEEEEECBTTBCCSCT
T ss_pred chHHHHhCcCCCCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHHcC---CCCeEEEecccccCCCCC
Confidence 4556667777889999999999999999999876 99999999999999999988766 458999999999999888
Q ss_pred CCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHH----hhhccCCCCCHHHHHHHHHh
Q 019957 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRE----RILQNYNYLTEEEIEDLCTS 311 (333)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~t~~~l~~ll~~ 311 (333)
++||+|++..+++|++++..+++++.++|||||.+++.++..... +.....+.. ..+.+...++.+++..++++
T Consensus 86 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 163 (239)
T 1xxl_A 86 DSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAPED--PVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSA 163 (239)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBCSS--HHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHH
T ss_pred CcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCCCCC--hhHHHHHHHHHHhccccccCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999988765422 221211111 23466788999999999999
Q ss_pred CCCcEEEEEE
Q 019957 312 CGLTNYTSKV 321 (333)
Q Consensus 312 aGf~~v~~~~ 321 (333)
+||++++...
T Consensus 164 aGf~~~~~~~ 173 (239)
T 1xxl_A 164 NQLAYQDIQK 173 (239)
T ss_dssp TTEEEEEEEE
T ss_pred CCCcEEEEEe
Confidence 9999887543
No 10
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.89 E-value=2.4e-22 Score=173.02 Aligned_cols=166 Identities=16% Similarity=0.203 Sum_probs=127.8
Q ss_pred HHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCC
Q 019957 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG 236 (333)
Q Consensus 157 ~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~ 236 (333)
.+.+.+...++.+|||||||+|.++..+++.+. +++|+|+++.+++.++++.. .++.++.+|+.++++. +
T Consensus 36 ~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~d~~~~~~~-~ 105 (220)
T 3hnr_A 36 DILEDVVNKSFGNVLEFGVGTGNLTNKLLLAGR--TVYGIEPSREMRMIAKEKLP-------KEFSITEGDFLSFEVP-T 105 (220)
T ss_dssp HHHHHHHHTCCSEEEEECCTTSHHHHHHHHTTC--EEEEECSCHHHHHHHHHHSC-------TTCCEESCCSSSCCCC-S
T ss_pred HHHHHhhccCCCeEEEeCCCCCHHHHHHHhCCC--eEEEEeCCHHHHHHHHHhCC-------CceEEEeCChhhcCCC-C
Confidence 344445555778999999999999999999854 99999999999999998742 3788999999999887 8
Q ss_pred CcceEEeccccccCCChHH--HHHHHHHhccCCcEEEEEEecccCCCcc-hhhHHHH-------HhhhccCCCCCHHHHH
Q 019957 237 FVDAVHAGAALHCWPSPSN--AVAEISRILRSGGVFVGTTFLRYTSSTS-LTGRVLR-------ERILQNYNYLTEEEIE 306 (333)
Q Consensus 237 ~fD~V~~~~vl~h~~d~~~--~l~~~~r~LkpgG~l~i~~~~~~~~~~~-~~~~~~~-------~~~~~~~~~~t~~~l~ 306 (333)
+||+|++..+++|++++.. +|+++.++|||||.+++.++........ .....+. ........+++.+++.
T Consensus 106 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (220)
T 3hnr_A 106 SIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQ 185 (220)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHH
T ss_pred CeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHH
Confidence 9999999999999999977 9999999999999999998765421110 0011110 1111334677999999
Q ss_pred HHHHhCCCcEEEEEEeCeEEEEEEeC
Q 019957 307 DLCTSCGLTNYTSKVQQSFIMFAAQK 332 (333)
Q Consensus 307 ~ll~~aGf~~v~~~~~~~~~~~~a~k 332 (333)
++++++||+++......-..++.++|
T Consensus 186 ~~l~~aGf~v~~~~~~~~~w~~~~~~ 211 (220)
T 3hnr_A 186 TIFENNGFHVTFTRLNHFVWVMEATK 211 (220)
T ss_dssp HHHHHTTEEEEEEECSSSEEEEEEEE
T ss_pred HHHHHCCCEEEEeeccceEEEEeehh
Confidence 99999999988765554444555554
No 11
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.89 E-value=3.2e-22 Score=176.28 Aligned_cols=165 Identities=13% Similarity=0.134 Sum_probs=135.1
Q ss_pred CCcHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccC
Q 019957 149 PGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV 228 (333)
Q Consensus 149 ~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~ 228 (333)
+......+.+...+...++.+|||||||+|.++..+++.. ..+++|+|+|+.+++.++++....++ ..++.++.+|+
T Consensus 19 ~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~--~~~v~~~~~d~ 95 (256)
T 1nkv_A 19 PFTEEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGV--SERVHFIHNDA 95 (256)
T ss_dssp SCCHHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCC
T ss_pred CCCHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCC--CcceEEEECCh
Confidence 4445566777777777788899999999999999999875 45999999999999999999888764 46899999999
Q ss_pred CCCCCCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHh--hhccCCCCCHHHHH
Q 019957 229 CRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRER--ILQNYNYLTEEEIE 306 (333)
Q Consensus 229 ~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~t~~~l~ 306 (333)
.++++ +++||+|++..+++|++++..+|+++.++|||||++++.++........ ..+... ...+..+++.+++.
T Consensus 96 ~~~~~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 171 (256)
T 1nkv_A 96 AGYVA-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPAT---EEIAQACGVSSTSDFLTLPGLV 171 (256)
T ss_dssp TTCCC-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSS---HHHHHTTTCSCGGGSCCHHHHH
T ss_pred HhCCc-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCCh---HHHHHHHhcccccccCCHHHHH
Confidence 99887 7899999999999999999999999999999999999998764322111 111111 12345788999999
Q ss_pred HHHHhCCCcEEEEE
Q 019957 307 DLCTSCGLTNYTSK 320 (333)
Q Consensus 307 ~ll~~aGf~~v~~~ 320 (333)
.+++++||++++..
T Consensus 172 ~~l~~aGf~~~~~~ 185 (256)
T 1nkv_A 172 GAFDDLGYDVVEMV 185 (256)
T ss_dssp HHHHTTTBCCCEEE
T ss_pred HHHHHCCCeeEEEE
Confidence 99999999987743
No 12
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.89 E-value=5.2e-22 Score=175.62 Aligned_cols=165 Identities=16% Similarity=0.209 Sum_probs=134.3
Q ss_pred CCcHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccC
Q 019957 149 PGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV 228 (333)
Q Consensus 149 ~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~ 228 (333)
+......+.+.+.+...++.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.++++... ..++.++.+|+
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~~d~ 111 (266)
T 3ujc_A 38 SGGLEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSG-----NNKIIFEANDI 111 (266)
T ss_dssp TTHHHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCS-----CTTEEEEECCT
T ss_pred cchHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhc-----CCCeEEEECcc
Confidence 3444555666777777778899999999999999999974 44999999999999999986543 25899999999
Q ss_pred CCCCCCCCCcceEEeccccccC--CChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHH-hhhccCCCCCHHHH
Q 019957 229 CRLPFASGFVDAVHAGAALHCW--PSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRE-RILQNYNYLTEEEI 305 (333)
Q Consensus 229 ~~lp~~~~~fD~V~~~~vl~h~--~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~t~~~l 305 (333)
.++++++++||+|++..+++|+ .++..+++++.++|||||.+++.++.... ...+ ...+.. ....+..+++.+++
T Consensus 112 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~ 189 (266)
T 3ujc_A 112 LTKEFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATE-KENW-DDEFKEYVKQRKYTLITVEEY 189 (266)
T ss_dssp TTCCCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESC-GGGC-CHHHHHHHHHHTCCCCCHHHH
T ss_pred ccCCCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCC-cccc-hHHHHHHHhcCCCCCCCHHHH
Confidence 9999888999999999999999 88899999999999999999999987653 1122 222222 22356778999999
Q ss_pred HHHHHhCCCcEEEEEE
Q 019957 306 EDLCTSCGLTNYTSKV 321 (333)
Q Consensus 306 ~~ll~~aGf~~v~~~~ 321 (333)
..+++++||++++...
T Consensus 190 ~~~l~~~Gf~~~~~~~ 205 (266)
T 3ujc_A 190 ADILTACNFKNVVSKD 205 (266)
T ss_dssp HHHHHHTTCEEEEEEE
T ss_pred HHHHHHcCCeEEEEEe
Confidence 9999999999988543
No 13
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.88 E-value=1.8e-21 Score=171.51 Aligned_cols=165 Identities=16% Similarity=0.209 Sum_probs=133.6
Q ss_pred CCcHHHHHHHHHhhc-ccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEcc
Q 019957 149 PGPDEEFKMAQEYFK-SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRAD 227 (333)
Q Consensus 149 ~~~~~~~~~~~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d 227 (333)
+........+...+. ..++.+|||||||+|.++..+++.++ .+++|+|+|+.+++.++++....++ ..++.++.+|
T Consensus 28 ~~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~~~d 104 (257)
T 3f4k_A 28 PGSPEATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVK-GQITGIDLFPDFIEIFNENAVKANC--ADRVKGITGS 104 (257)
T ss_dssp SCCHHHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCC-SEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECC
T ss_pred CCCHHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCC-CeEEEEECCHHHHHHHHHHHHHcCC--CCceEEEECC
Confidence 444555566666663 45677999999999999999999975 3999999999999999999988775 4569999999
Q ss_pred CCCCCCCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCc-chhhHHHHHhhhccCCCCCHHHHH
Q 019957 228 VCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSST-SLTGRVLRERILQNYNYLTEEEIE 306 (333)
Q Consensus 228 ~~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~t~~~l~ 306 (333)
+..+|+++++||+|++..+++|+ ++..+++++.++|||||++++.++....... ......|.. .....++.+++.
T Consensus 105 ~~~~~~~~~~fD~v~~~~~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 180 (257)
T 3f4k_A 105 MDNLPFQNEELDLIWSEGAIYNI-GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMD---AYPEISVIPTCI 180 (257)
T ss_dssp TTSCSSCTTCEEEEEEESCSCCC-CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHH---HCTTCCBHHHHH
T ss_pred hhhCCCCCCCEEEEEecChHhhc-CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHH---hCCCCCCHHHHH
Confidence 99999888999999999999999 8999999999999999999999976432211 112222322 223467999999
Q ss_pred HHHHhCCCcEEEEE
Q 019957 307 DLCTSCGLTNYTSK 320 (333)
Q Consensus 307 ~ll~~aGf~~v~~~ 320 (333)
.+++++||+++...
T Consensus 181 ~~l~~aGf~~v~~~ 194 (257)
T 3f4k_A 181 DKMERAGYTPTAHF 194 (257)
T ss_dssp HHHHHTTEEEEEEE
T ss_pred HHHHHCCCeEEEEE
Confidence 99999999998854
No 14
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.88 E-value=1.3e-21 Score=173.63 Aligned_cols=166 Identities=16% Similarity=0.210 Sum_probs=134.8
Q ss_pred CCcHHHHHHHHHhhc-ccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEcc
Q 019957 149 PGPDEEFKMAQEYFK-SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRAD 227 (333)
Q Consensus 149 ~~~~~~~~~~~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d 227 (333)
+........+...+. ..++.+|||||||+|.++..+++. +..+|+|+|+|+.+++.+++++...++ .+++.++.+|
T Consensus 28 ~~~~~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d 104 (267)
T 3kkz_A 28 PGSPEVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGL--QNRVTGIVGS 104 (267)
T ss_dssp SCCHHHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECC
T ss_pred CCCHHHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCC--CcCcEEEEcC
Confidence 344555566666665 456789999999999999999998 466999999999999999999988775 5679999999
Q ss_pred CCCCCCCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCc-chhhHHHHHhhhccCCCCCHHHHH
Q 019957 228 VCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSST-SLTGRVLRERILQNYNYLTEEEIE 306 (333)
Q Consensus 228 ~~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~t~~~l~ 306 (333)
+.++++++++||+|++..+++|+ ++..+++++.++|||||++++.++....... ......|.. ....+.+.+++.
T Consensus 105 ~~~~~~~~~~fD~i~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 180 (267)
T 3kkz_A 105 MDDLPFRNEELDLIWSEGAIYNI-GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMD---AYPEIDTIPNQV 180 (267)
T ss_dssp TTSCCCCTTCEEEEEESSCGGGT-CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHH---HCTTCEEHHHHH
T ss_pred hhhCCCCCCCEEEEEEcCCceec-CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHH---hCCCCCCHHHHH
Confidence 99999888999999999999999 8999999999999999999999976432211 112222322 233577999999
Q ss_pred HHHHhCCCcEEEEEE
Q 019957 307 DLCTSCGLTNYTSKV 321 (333)
Q Consensus 307 ~ll~~aGf~~v~~~~ 321 (333)
++++++||++++...
T Consensus 181 ~~l~~aGf~~v~~~~ 195 (267)
T 3kkz_A 181 AKIHKAGYLPVATFI 195 (267)
T ss_dssp HHHHHTTEEEEEEEE
T ss_pred HHHHHCCCEEEEEEE
Confidence 999999999988644
No 15
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.88 E-value=8.5e-22 Score=172.30 Aligned_cols=154 Identities=13% Similarity=0.113 Sum_probs=122.4
Q ss_pred HHHHhhc-ccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCC
Q 019957 157 MAQEYFK-SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (333)
Q Consensus 157 ~~~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (333)
.+.+.+. ..++.+|||||||+|.++..+++.++ +++|+|+|+.+++.++++.. .++.++.+|+.++ +.+
T Consensus 32 ~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~-------~~v~~~~~d~~~~-~~~ 101 (250)
T 2p7i_A 32 FMVRAFTPFFRPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLK-------DGITYIHSRFEDA-QLP 101 (250)
T ss_dssp HHHHHHGGGCCSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSC-------SCEEEEESCGGGC-CCS
T ss_pred HHHHHHHhhcCCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhh-------CCeEEEEccHHHc-CcC
Confidence 3444443 24567999999999999999999876 89999999999999998632 1799999999887 457
Q ss_pred CCcceEEeccccccCCChHHHHHHHH-HhccCCcEEEEEEecccCCCcch------hhHH----HHHhhhccCCCCCHHH
Q 019957 236 GFVDAVHAGAALHCWPSPSNAVAEIS-RILRSGGVFVGTTFLRYTSSTSL------TGRV----LRERILQNYNYLTEEE 304 (333)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~~~-r~LkpgG~l~i~~~~~~~~~~~~------~~~~----~~~~~~~~~~~~t~~~ 304 (333)
++||+|++.+++||++++..+|+++. ++|||||++++.+++........ +... .......|..+++.++
T Consensus 102 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (250)
T 2p7i_A 102 RRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDT 181 (250)
T ss_dssp SCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHH
T ss_pred CcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHH
Confidence 89999999999999999999999999 99999999999998764210000 0000 0111336677899999
Q ss_pred HHHHHHhCCCcEEEEE
Q 019957 305 IEDLCTSCGLTNYTSK 320 (333)
Q Consensus 305 l~~ll~~aGf~~v~~~ 320 (333)
+.++++++||++++..
T Consensus 182 ~~~~l~~~Gf~~~~~~ 197 (250)
T 2p7i_A 182 LERDASRAGLQVTYRS 197 (250)
T ss_dssp HHHHHHHTTCEEEEEE
T ss_pred HHHHHHHCCCeEEEEe
Confidence 9999999999998853
No 16
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.88 E-value=2e-21 Score=176.62 Aligned_cols=160 Identities=16% Similarity=0.086 Sum_probs=131.1
Q ss_pred HHHHHhhc-ccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCC
Q 019957 156 KMAQEYFK-SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA 234 (333)
Q Consensus 156 ~~~~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~ 234 (333)
+.+.+.+. ..++.+|||||||+|.++..+++.. ..+|+|+|+++.+++.|++++...++ ..++.++.+|+.++++.
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~ 182 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRI--DDHVRSRVCNMLDTPFD 182 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCTTSCCCC
T ss_pred HHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCC--CCceEEEECChhcCCCC
Confidence 45566666 5678899999999999999999883 34999999999999999999988775 56899999999999988
Q ss_pred CCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcch--hhHHHHHhhhccCCCCCHHHHHHHHHhC
Q 019957 235 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSL--TGRVLRERILQNYNYLTEEEIEDLCTSC 312 (333)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~t~~~l~~ll~~a 312 (333)
+++||+|++..+++|+ ++..+++++.++|||||++++.++......... ....+... ....+++.+++.++++++
T Consensus 183 ~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~s~~~~~~~l~~a 259 (312)
T 3vc1_A 183 KGAVTASWNNESTMYV-DLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAH--FECNIHSRREYLRAMADN 259 (312)
T ss_dssp TTCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHH--HTCCCCBHHHHHHHHHTT
T ss_pred CCCEeEEEECCchhhC-CHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhh--hcCCCCCHHHHHHHHHHC
Confidence 8999999999999999 699999999999999999999998765422111 11222211 233578999999999999
Q ss_pred CCcEEEEEE
Q 019957 313 GLTNYTSKV 321 (333)
Q Consensus 313 Gf~~v~~~~ 321 (333)
||++++...
T Consensus 260 Gf~~~~~~~ 268 (312)
T 3vc1_A 260 RLVPHTIVD 268 (312)
T ss_dssp TEEEEEEEE
T ss_pred CCEEEEEEe
Confidence 999888654
No 17
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.88 E-value=4.8e-22 Score=176.66 Aligned_cols=179 Identities=23% Similarity=0.390 Sum_probs=125.7
Q ss_pred eecccCCCccccccCCCCccccccccCceeeCCCCccccCcCCceeeecccCCCCcCCCCccccccccCcchhHHHHhhH
Q 019957 60 LFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSKDNYLDLTVISGLKDYTEVKPASTELFRSPFVSFLYERGW 139 (333)
Q Consensus 60 ~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~g~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~ 139 (333)
.+.||.|++.+.... +.++|.+|+..+...+||++++......... . ....+.+ . .
T Consensus 2 ~~~Cp~C~~~~~~~~-----------~~~~C~~~~~~~~~~~Gy~~~~~~~~~~~~~-~-~~~~~~~--------~---~ 57 (269)
T 1p91_A 2 SFSCPLCHQPLSREK-----------NSYICPQRHQFDMAKEGYVNLLPVQHKRSRD-P-GDSAEMM--------Q---A 57 (269)
T ss_dssp CBBCTTTCCBCEEET-----------TEEECTTCCEEEBCTTSCEECSCSSSSCSCC-C-SSSHHHH--------H---H
T ss_pred cccCCCCCccceeCC-----------CEEECCCCCcCCcCCCEEEEeecccccCCCC-C-CCCHHHH--------H---H
Confidence 378999999875533 3789999998888889999988653211100 0 0000000 0 0
Q ss_pred HhhcccCCCCC--cHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCC
Q 019957 140 RQNFNRSGFPG--PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTIL 217 (333)
Q Consensus 140 ~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~ 217 (333)
+..+...+++. .....+.+...+. .++.+|||||||+|.++..+++..+..+++|+|+|+.+++.++++
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~-------- 128 (269)
T 1p91_A 58 RRAFLDAGHYQPLRDAIVAQLRERLD-DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKR-------- 128 (269)
T ss_dssp HHHHHTTTTTHHHHHHHHHHHHHHSC-TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHH--------
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHh--------
Confidence 11122222211 1112233333322 457799999999999999999985556999999999999999886
Q ss_pred CCCeEEEEccCCCCCCCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEeccc
Q 019957 218 TSNLALVRADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRY 278 (333)
Q Consensus 218 ~~~i~~~~~d~~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~ 278 (333)
..++.++.+|+..+++.+++||+|++..+.. .++++.++|||||.+++.++...
T Consensus 129 ~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~-------~l~~~~~~L~pgG~l~~~~~~~~ 182 (269)
T 1p91_A 129 YPQVTFCVASSHRLPFSDTSMDAIIRIYAPC-------KAEELARVVKPGGWVITATPGPR 182 (269)
T ss_dssp CTTSEEEECCTTSCSBCTTCEEEEEEESCCC-------CHHHHHHHEEEEEEEEEEEECTT
T ss_pred CCCcEEEEcchhhCCCCCCceeEEEEeCChh-------hHHHHHHhcCCCcEEEEEEcCHH
Confidence 4578899999999998889999999976633 48999999999999999998763
No 18
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.88 E-value=1.2e-21 Score=168.77 Aligned_cols=164 Identities=15% Similarity=0.094 Sum_probs=126.3
Q ss_pred HHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcC--CCCCeEEEEccCCCC
Q 019957 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI--LTSNLALVRADVCRL 231 (333)
Q Consensus 154 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~--~~~~i~~~~~d~~~l 231 (333)
..+.+.+.+...++.+|||||||+|.++..+++.++..+++|+|+|+.+++.+++++...++. ...++.++.+|+...
T Consensus 17 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 96 (219)
T 3jwg_A 17 RLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYR 96 (219)
T ss_dssp HHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSC
T ss_pred HHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccc
Confidence 345666667666788999999999999999999886679999999999999999988765420 012799999999888
Q ss_pred CCCCCCcceEEeccccccCCCh--HHHHHHHHHhccCCcEEEEEEecccC-CCcchhhHHHHHhhhccCCCCCHHHHH--
Q 019957 232 PFASGFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYT-SSTSLTGRVLRERILQNYNYLTEEEIE-- 306 (333)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~t~~~l~-- 306 (333)
++.+++||+|++..+++|++++ ..+++++.++|||||+++. +++... ...+. ..........+...++.+++.
T Consensus 97 ~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~ 174 (219)
T 3jwg_A 97 DKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVS-TPNKEYNFHYGN-LFEGNLRHRDHRFEWTRKEFQTW 174 (219)
T ss_dssp CGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEE-EEBGGGGGCCCC-T-----GGGCCTTSBCHHHHHHH
T ss_pred ccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEE-ccchhhhhhhcc-cCcccccccCceeeecHHHHHHH
Confidence 8778899999999999999977 6899999999999995554 444321 11111 111112334677789999999
Q ss_pred --HHHHhCCCcEEEE
Q 019957 307 --DLCTSCGLTNYTS 319 (333)
Q Consensus 307 --~ll~~aGf~~v~~ 319 (333)
.+++++||++...
T Consensus 175 ~~~l~~~~Gf~v~~~ 189 (219)
T 3jwg_A 175 AVKVAEKYGYSVRFL 189 (219)
T ss_dssp HHHHHHHHTEEEEEE
T ss_pred HHHHHHHCCcEEEEE
Confidence 8899999987654
No 19
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.88 E-value=1.2e-21 Score=174.67 Aligned_cols=164 Identities=17% Similarity=0.265 Sum_probs=132.0
Q ss_pred HHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCC
Q 019957 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (333)
Q Consensus 156 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (333)
+.+.......++.+|||||||+|.++..+++.++..+++|+|+|+.+++.+++++...+ ..++.++.+|+..+++++
T Consensus 27 ~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~d~~~~~~~~ 103 (276)
T 3mgg_A 27 KLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNG---IKNVKFLQANIFSLPFED 103 (276)
T ss_dssp HHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT---CCSEEEEECCGGGCCSCT
T ss_pred HHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEcccccCCCCC
Confidence 33333344456789999999999999999999877899999999999999999988876 458999999999999888
Q ss_pred CCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCC----CcchhhHHHHH----hhhccCCCCCHHHHHH
Q 019957 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTS----STSLTGRVLRE----RILQNYNYLTEEEIED 307 (333)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~----~~~~~~~~~~~----~~~~~~~~~t~~~l~~ 307 (333)
++||+|++..+++|++++..+++++.++|||||++++.++..... ..+.....+.. ....+...++..++..
T Consensus 104 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 183 (276)
T 3mgg_A 104 SSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIYP 183 (276)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHHH
T ss_pred CCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHHH
Confidence 999999999999999999999999999999999999998754311 11111222211 1224456678899999
Q ss_pred HHHhCCCcEEEEEEe
Q 019957 308 LCTSCGLTNYTSKVQ 322 (333)
Q Consensus 308 ll~~aGf~~v~~~~~ 322 (333)
+|+++||+++++...
T Consensus 184 ~l~~aGf~~v~~~~~ 198 (276)
T 3mgg_A 184 LLQESGFEKIRVEPR 198 (276)
T ss_dssp HHHHTTCEEEEEEEE
T ss_pred HHHHCCCCeEEEeeE
Confidence 999999999886543
No 20
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.88 E-value=5.9e-22 Score=170.45 Aligned_cols=165 Identities=12% Similarity=0.066 Sum_probs=124.9
Q ss_pred HHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcC--CCCCeEEEEccCCCC
Q 019957 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI--LTSNLALVRADVCRL 231 (333)
Q Consensus 154 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~--~~~~i~~~~~d~~~l 231 (333)
..+.+.+.+...++.+|||||||+|.++..+++.++..+++|+|+|+.+++.+++++...++. ...++.++.+|+...
T Consensus 17 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 96 (217)
T 3jwh_A 17 RMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQ 96 (217)
T ss_dssp HHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSC
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccc
Confidence 446666777767788999999999999999999886679999999999999999998765530 012799999999888
Q ss_pred CCCCCCcceEEeccccccCCCh--HHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHH---
Q 019957 232 PFASGFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIE--- 306 (333)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~--- 306 (333)
+..+++||+|++..+++|++++ ..+++++.++|||||++++..........+. ..........+...++.+++.
T Consensus 97 ~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~ 175 (217)
T 3jwh_A 97 DKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFAN-LPAGKLRHKDHRFEWTRSQFQNWA 175 (217)
T ss_dssp CGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC------------CCSCBCHHHHHHHH
T ss_pred cccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhcc-cccccccccccccccCHHHHHHHH
Confidence 7777899999999999999877 7999999999999996665543221000000 000011234667789999999
Q ss_pred -HHHHhCCCcEEEE
Q 019957 307 -DLCTSCGLTNYTS 319 (333)
Q Consensus 307 -~ll~~aGf~~v~~ 319 (333)
.+++++||++...
T Consensus 176 ~~~~~~~Gf~v~~~ 189 (217)
T 3jwh_A 176 NKITERFAYNVQFQ 189 (217)
T ss_dssp HHHHHHSSEEEEEC
T ss_pred HHHHHHcCceEEEE
Confidence 9999999987653
No 21
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.87 E-value=1.1e-21 Score=175.97 Aligned_cols=151 Identities=16% Similarity=0.165 Sum_probs=123.0
Q ss_pred CCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-CCCCCcceEEecc
Q 019957 167 GGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-FASGFVDAVHAGA 245 (333)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-~~~~~fD~V~~~~ 245 (333)
+.+|||||||+|.++..+++.+. +++|+|+|+.+++.+++++...++ ..++.++.+|+.+++ +.+++||+|++..
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 144 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAERGH--QVILCDLSAQMIDRAKQAAEAKGV--SDNMQFIHCAAQDVASHLETPVDLILFHA 144 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHC-CC--GGGEEEEESCGGGTGGGCSSCEEEEEEES
T ss_pred CCEEEEeCCcchHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCC--CcceEEEEcCHHHhhhhcCCCceEEEECc
Confidence 57999999999999999999854 999999999999999999887764 468999999999887 7788999999999
Q ss_pred ccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcch-hh---HHHHH-------hhhccCCCCCHHHHHHHHHhCCC
Q 019957 246 ALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSL-TG---RVLRE-------RILQNYNYLTEEEIEDLCTSCGL 314 (333)
Q Consensus 246 vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~-~~---~~~~~-------~~~~~~~~~t~~~l~~ll~~aGf 314 (333)
+++|++++..+++++.++|||||++++.+++........ .. ..+.. ....+..+++.+++..+++++||
T Consensus 145 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf 224 (285)
T 4htf_A 145 VLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEAGW 224 (285)
T ss_dssp CGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHTTC
T ss_pred hhhcccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHCCC
Confidence 999999999999999999999999999998754210000 00 00000 11244578999999999999999
Q ss_pred cEEEEEE
Q 019957 315 TNYTSKV 321 (333)
Q Consensus 315 ~~v~~~~ 321 (333)
++++...
T Consensus 225 ~v~~~~~ 231 (285)
T 4htf_A 225 QIMGKTG 231 (285)
T ss_dssp EEEEEEE
T ss_pred ceeeeee
Confidence 9987644
No 22
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.87 E-value=2e-21 Score=169.65 Aligned_cols=154 Identities=23% Similarity=0.318 Sum_probs=126.5
Q ss_pred HHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCC
Q 019957 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (333)
Q Consensus 154 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~ 233 (333)
..+.+...+. ++.+|||||||+|.++..+++.+. +++|+|+++.+++.++++.. ..++.++.+|+.++++
T Consensus 43 ~~~~l~~~~~--~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~ 112 (242)
T 3l8d_A 43 IIPFFEQYVK--KEAEVLDVGCGDGYGTYKLSRTGY--KAVGVDISEVMIQKGKERGE------GPDLSFIKGDLSSLPF 112 (242)
T ss_dssp HHHHHHHHSC--TTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHTTTC------BTTEEEEECBTTBCSS
T ss_pred HHHHHHHHcC--CCCeEEEEcCCCCHHHHHHHHcCC--eEEEEECCHHHHHHHHhhcc------cCCceEEEcchhcCCC
Confidence 4455555554 577999999999999999999865 99999999999999987631 4689999999999998
Q ss_pred CCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHH--hhhccCCCCCHHHHHHHHHh
Q 019957 234 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRE--RILQNYNYLTEEEIEDLCTS 311 (333)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~t~~~l~~ll~~ 311 (333)
++++||+|++..+++|++++..+++++.++|||||++++.++........ ..+.. ....+...++.+++..++++
T Consensus 113 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~ 189 (242)
T 3l8d_A 113 ENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAILGPTAKPRE---NSYPRLYGKDVVCNTMMPWEFEQLVKE 189 (242)
T ss_dssp CTTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGG---GGGGGGGTCCCSSCCCCHHHHHHHHHH
T ss_pred CCCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhh---hhhhhhccccccccCCCHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999765422111 11111 22246677999999999999
Q ss_pred CCCcEEEEE
Q 019957 312 CGLTNYTSK 320 (333)
Q Consensus 312 aGf~~v~~~ 320 (333)
+||++++..
T Consensus 190 ~Gf~~~~~~ 198 (242)
T 3l8d_A 190 QGFKVVDGI 198 (242)
T ss_dssp TTEEEEEEE
T ss_pred cCCEEEEee
Confidence 999998854
No 23
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.87 E-value=6.1e-22 Score=168.47 Aligned_cols=138 Identities=13% Similarity=0.171 Sum_probs=118.8
Q ss_pred CCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEeccc
Q 019957 167 GGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAA 246 (333)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~v 246 (333)
+.+|||||||+|.++..+++.+. +++|+|+|+.+++.++++ ..++.++.+|+.++++++++||+|++..+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 111 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH--QIEGLEPATRLVELARQT--------HPSVTFHHGTITDLSDSPKRWAGLLAWYS 111 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC--CEEEECCCHHHHHHHHHH--------CTTSEEECCCGGGGGGSCCCEEEEEEESS
T ss_pred CCeEEEecCCCCHHHHHHHhcCC--eEEEEeCCHHHHHHHHHh--------CCCCeEEeCcccccccCCCCeEEEEehhh
Confidence 67999999999999999999865 999999999999999986 45799999999999888899999999999
Q ss_pred cccCC--ChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019957 247 LHCWP--SPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSKV 321 (333)
Q Consensus 247 l~h~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf~~v~~~~ 321 (333)
++|++ ++..+++++.++|||||.+++.++.... ...+ . ....+..+++.+++.++++++||++++...
T Consensus 112 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~-~~~~-~-----~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 181 (203)
T 3h2b_A 112 LIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPS-LEPM-Y-----HPVATAYRWPLPELAQALETAGFQVTSSHW 181 (203)
T ss_dssp STTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSS-CEEE-C-----CSSSCEEECCHHHHHHHHHHTTEEEEEEEE
T ss_pred HhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCc-hhhh-h-----chhhhhccCCHHHHHHHHHHCCCcEEEEEe
Confidence 99997 8899999999999999999999987642 1111 0 112345678999999999999999988754
No 24
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.87 E-value=3.5e-21 Score=169.46 Aligned_cols=158 Identities=16% Similarity=0.150 Sum_probs=123.4
Q ss_pred HHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCC
Q 019957 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (333)
Q Consensus 156 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (333)
..+.+.+...++.+|||||||+|.++..+++.++ .+++|+|+|+.+++.++++.. ..++.++.+|+..+++++
T Consensus 34 ~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~~~ 106 (253)
T 3g5l_A 34 HELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGA-KKVLGIDLSERMLTEAKRKTT------SPVVCYEQKAIEDIAIEP 106 (253)
T ss_dssp HHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHCC------CTTEEEEECCGGGCCCCT
T ss_pred HHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHhhc------cCCeEEEEcchhhCCCCC
Confidence 4455666666788999999999999999999864 389999999999999998753 257999999999999888
Q ss_pred CCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCc---chh------------hHHHHH--------h
Q 019957 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSST---SLT------------GRVLRE--------R 292 (333)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~---~~~------------~~~~~~--------~ 292 (333)
++||+|++..+++|++++..+++++.++|||||.+++.+++...... .|. ...+.. .
T Consensus 107 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (253)
T 3g5l_A 107 DAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLG 186 (253)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETT
T ss_pred CCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeecc
Confidence 99999999999999999999999999999999999998765420000 000 000000 0
Q ss_pred hhccCCCCCHHHHHHHHHhCCCcEEEEE
Q 019957 293 ILQNYNYLTEEEIEDLCTSCGLTNYTSK 320 (333)
Q Consensus 293 ~~~~~~~~t~~~l~~ll~~aGf~~v~~~ 320 (333)
.......++.+++.++|+++||++++..
T Consensus 187 ~~~~~~~~t~~~~~~~l~~aGF~~~~~~ 214 (253)
T 3g5l_A 187 EDVQKYHRTVTTYIQTLLKNGFQINSVI 214 (253)
T ss_dssp EEEEEECCCHHHHHHHHHHTTEEEEEEE
T ss_pred ccCccEecCHHHHHHHHHHcCCeeeeee
Confidence 0111223499999999999999998865
No 25
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.87 E-value=1.6e-21 Score=172.68 Aligned_cols=156 Identities=19% Similarity=0.145 Sum_probs=127.1
Q ss_pred HHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC
Q 019957 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP 232 (333)
Q Consensus 153 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp 232 (333)
...+.+.+.+...++.+|||||||+|.++..+++.+ .+|+|+|+|+.+++.+++ ..++.++.+|+.+++
T Consensus 21 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~---------~~~~~~~~~d~~~~~ 89 (261)
T 3ege_A 21 RIVNAIINLLNLPKGSVIADIGAGTGGYSVALANQG--LFVYAVEPSIVMRQQAVV---------HPQVEWFTGYAENLA 89 (261)
T ss_dssp HHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTT--CEEEEECSCHHHHHSSCC---------CTTEEEECCCTTSCC
T ss_pred HHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhCC--CEEEEEeCCHHHHHHHHh---------ccCCEEEECchhhCC
Confidence 345667777776778899999999999999999854 499999999999987765 348999999999999
Q ss_pred CCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHH-hhhccCCCCCHHHHHHHHHh
Q 019957 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRE-RILQNYNYLTEEEIEDLCTS 311 (333)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~t~~~l~~ll~~ 311 (333)
+++++||+|++..+++|++++..+++++.++|| ||.+++.++........|....+.. ....+..+.+.+++. ++++
T Consensus 90 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~ 167 (261)
T 3ege_A 90 LPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN-LLQE 167 (261)
T ss_dssp SCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-HHHH
T ss_pred CCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-HHHH
Confidence 988999999999999999999999999999999 9999999887654333332222221 122456678889999 9999
Q ss_pred CCCcEEEEEE
Q 019957 312 CGLTNYTSKV 321 (333)
Q Consensus 312 aGf~~v~~~~ 321 (333)
+||+++++..
T Consensus 168 aGF~~v~~~~ 177 (261)
T 3ege_A 168 NTKRRVEAIP 177 (261)
T ss_dssp HHCSEEEEEE
T ss_pred cCCCceeEEE
Confidence 9999887544
No 26
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.87 E-value=1.5e-21 Score=176.87 Aligned_cols=167 Identities=15% Similarity=0.158 Sum_probs=131.7
Q ss_pred ccCCCeEEEEcCCcCHHHHHHH-HhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEE
Q 019957 164 SAQGGLLVDVSCGSGLFSRKFA-KSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVH 242 (333)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~-~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~ 242 (333)
..++.+|||||||+|.++..++ ...+..+|+|+|+|+.+++.+++++...++ ..++.++.+|+.+++++ ++||+|+
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~-~~fD~v~ 192 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHAL--AGQITLHRQDAWKLDTR-EGYDLLT 192 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTT--GGGEEEEECCGGGCCCC-SCEEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCC--CCceEEEECchhcCCcc-CCeEEEE
Confidence 3467899999999999999985 445677999999999999999999887764 45699999999999887 8999999
Q ss_pred eccccccCCChHH---HHHHHHHhccCCcEEEEEEecccCC---Ccchhh----H-------H-HHHhhhc-cCCCCCHH
Q 019957 243 AGAALHCWPSPSN---AVAEISRILRSGGVFVGTTFLRYTS---STSLTG----R-------V-LRERILQ-NYNYLTEE 303 (333)
Q Consensus 243 ~~~vl~h~~d~~~---~l~~~~r~LkpgG~l~i~~~~~~~~---~~~~~~----~-------~-~~~~~~~-~~~~~t~~ 303 (333)
+..+++|++++.. +++++.++|||||++++.+...... ...|.. . . +...... ...+++.+
T Consensus 193 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (305)
T 3ocj_A 193 SNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHA 272 (305)
T ss_dssp CCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHH
T ss_pred ECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHH
Confidence 9999999999976 7999999999999999988665321 111110 0 0 1111112 22568999
Q ss_pred HHHHHHHhCCCcEEEEEE--eCeEEEEEEeCC
Q 019957 304 EIEDLCTSCGLTNYTSKV--QQSFIMFAAQKP 333 (333)
Q Consensus 304 ~l~~ll~~aGf~~v~~~~--~~~~~~~~a~kp 333 (333)
++.++++++||++++... ...+.+++++||
T Consensus 273 ~~~~~l~~aGF~~v~~~~~~~~~~~~v~a~Kp 304 (305)
T 3ocj_A 273 QTRAQLEEAGFTDLRFEDDRARLFPTVIARKP 304 (305)
T ss_dssp HHHHHHHHTTCEEEEEECCTTSSSCEEEEECC
T ss_pred HHHHHHHHCCCEEEEEEcccCceeeEEEEecC
Confidence 999999999999988653 445578888887
No 27
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.86 E-value=1.4e-20 Score=168.81 Aligned_cols=160 Identities=16% Similarity=0.161 Sum_probs=126.2
Q ss_pred HHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCC
Q 019957 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (333)
Q Consensus 156 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (333)
+.+.+.+...++.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.+++++...++ ..++.++.+|+.++|
T Consensus 54 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvd~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~~--- 127 (287)
T 1kpg_A 54 DLALGKLGLQPGMTLLDVGCGWGATMMRAVEKY-DVNVVGLTLSKNQANHVQQLVANSEN--LRSKRVLLAGWEQFD--- 127 (287)
T ss_dssp HHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTCCC--CSCEEEEESCGGGCC---
T ss_pred HHHHHHcCCCCcCEEEEECCcccHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCC--CCCeEEEECChhhCC---
Confidence 455555666678899999999999999998553 23999999999999999999887764 568999999998876
Q ss_pred CCcceEEeccccccC--CChHHHHHHHHHhccCCcEEEEEEecccCCCc------c------hhhHHHHHhhhccCCCCC
Q 019957 236 GFVDAVHAGAALHCW--PSPSNAVAEISRILRSGGVFVGTTFLRYTSST------S------LTGRVLRERILQNYNYLT 301 (333)
Q Consensus 236 ~~fD~V~~~~vl~h~--~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~------~------~~~~~~~~~~~~~~~~~t 301 (333)
++||+|++..+++|+ .++..+++++.++|||||.+++.++....... + ....++..........++
T Consensus 128 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 207 (287)
T 1kpg_A 128 EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPS 207 (287)
T ss_dssp CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCC
T ss_pred CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCC
Confidence 789999999999999 67899999999999999999999987642111 0 001111111223345679
Q ss_pred HHHHHHHHHhCCCcEEEEEE
Q 019957 302 EEEIEDLCTSCGLTNYTSKV 321 (333)
Q Consensus 302 ~~~l~~ll~~aGf~~v~~~~ 321 (333)
.+++.++++++||++++...
T Consensus 208 ~~~~~~~l~~aGf~~~~~~~ 227 (287)
T 1kpg_A 208 IPMVQECASANGFTVTRVQS 227 (287)
T ss_dssp HHHHHHHHHTTTCEEEEEEE
T ss_pred HHHHHHHHHhCCcEEEEEEe
Confidence 99999999999999988644
No 28
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.86 E-value=1.4e-21 Score=161.47 Aligned_cols=139 Identities=13% Similarity=0.202 Sum_probs=117.6
Q ss_pred HhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcc
Q 019957 160 EYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVD 239 (333)
Q Consensus 160 ~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD 239 (333)
+.+...++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++ .+++.++.+| +++.+++||
T Consensus 11 ~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~--------~~~v~~~~~d---~~~~~~~~D 77 (170)
T 3i9f_A 11 PNIFEGKKGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVKEK--------FDSVITLSDP---KEIPDNSVD 77 (170)
T ss_dssp HHHHSSCCEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHHHH--------CTTSEEESSG---GGSCTTCEE
T ss_pred HhcCcCCCCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHHHh--------CCCcEEEeCC---CCCCCCceE
Confidence 344556678999999999999999999874 999999999999999986 4578999998 666788999
Q ss_pred eEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCCcEEEE
Q 019957 240 AVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTS 319 (333)
Q Consensus 240 ~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf~~v~~ 319 (333)
+|++..+++|++++..+++++.++|||||++++.++....... .+.+...++.+++.++++ ||++++.
T Consensus 78 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~--Gf~~~~~ 145 (170)
T 3i9f_A 78 FILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKENTGI----------GPPLSIRMDEKDYMGWFS--NFVVEKR 145 (170)
T ss_dssp EEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSSCCSS----------SSCGGGCCCHHHHHHHTT--TEEEEEE
T ss_pred EEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCcccccc----------CchHhhhcCHHHHHHHHh--CcEEEEc
Confidence 9999999999999999999999999999999999887642211 113456689999999998 9999987
Q ss_pred EEeC
Q 019957 320 KVQQ 323 (333)
Q Consensus 320 ~~~~ 323 (333)
....
T Consensus 146 ~~~~ 149 (170)
T 3i9f_A 146 FNPT 149 (170)
T ss_dssp ECSS
T ss_pred cCCC
Confidence 6544
No 29
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.86 E-value=6.6e-21 Score=163.07 Aligned_cols=148 Identities=22% Similarity=0.320 Sum_probs=122.7
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEecc
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 245 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~ 245 (333)
++.+|||||||+|.++..+++.+. +++|+|+|+.+++.++++. ++.++.+|+..++ .+++||+|++..
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~---------~~~~~~~d~~~~~-~~~~fD~v~~~~ 110 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAAGF--DVDATDGSPELAAEASRRL---------GRPVRTMLFHQLD-AIDAYDAVWAHA 110 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH---------TSCCEECCGGGCC-CCSCEEEEEECS
T ss_pred CCCcEEEECCCCCHHHHHHHHcCC--eEEEECCCHHHHHHHHHhc---------CCceEEeeeccCC-CCCcEEEEEecC
Confidence 477999999999999999999865 9999999999999999864 4567889999888 678999999999
Q ss_pred ccccCC--ChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCC-CcEEEEEEe
Q 019957 246 ALHCWP--SPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCG-LTNYTSKVQ 322 (333)
Q Consensus 246 vl~h~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aG-f~~v~~~~~ 322 (333)
+++|++ ++..+|+++.++|||||++++..+........ ....+..+++.+++.++++++| |++++....
T Consensus 111 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~ 182 (211)
T 3e23_A 111 CLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRD--------KLARYYNYPSEEWLRARYAEAGTWASVAVESS 182 (211)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEEC--------TTSCEECCCCHHHHHHHHHHHCCCSEEEEEEE
T ss_pred chhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCccccc--------ccchhccCCCHHHHHHHHHhCCCcEEEEEEec
Confidence 999998 77899999999999999999998765422111 1224567899999999999999 999886542
Q ss_pred ---------CeEEEEEEeCC
Q 019957 323 ---------QSFIMFAAQKP 333 (333)
Q Consensus 323 ---------~~~~~~~a~kp 333 (333)
..|+.++..||
T Consensus 183 ~~~~~~~~~~~wl~~~~~~~ 202 (211)
T 3e23_A 183 EGKGFDQELAQFLHVSVRKP 202 (211)
T ss_dssp EEECTTSCEEEEEEEEEECC
T ss_pred cCCCCCCCCceEEEEEEecC
Confidence 23677776664
No 30
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.86 E-value=9.4e-21 Score=167.04 Aligned_cols=153 Identities=14% Similarity=0.117 Sum_probs=121.1
Q ss_pred HHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCC
Q 019957 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (333)
Q Consensus 156 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (333)
..+.+.+...++.+|||||||+|.++..+++..+..+++|+|+|+.+++.++++ .+++.++.+|+.+++ .+
T Consensus 23 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~--------~~~~~~~~~d~~~~~-~~ 93 (259)
T 2p35_A 23 RDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR--------LPNTNFGKADLATWK-PA 93 (259)
T ss_dssp HHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH--------STTSEEEECCTTTCC-CS
T ss_pred HHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh--------CCCcEEEECChhhcC-cc
Confidence 345555556677899999999999999999986666999999999999999986 457899999999988 67
Q ss_pred CCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHH------hh----hccCCCCCHHHH
Q 019957 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRE------RI----LQNYNYLTEEEI 305 (333)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~------~~----~~~~~~~t~~~l 305 (333)
++||+|++..+++|++++..+++++.++|||||.+++.++................ .. ..+..+++.+++
T Consensus 94 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (259)
T 2p35_A 94 QKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDY 173 (259)
T ss_dssp SCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCCHHHH
T ss_pred CCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCCHHHH
Confidence 89999999999999999999999999999999999999976432111000111110 00 235678999999
Q ss_pred HHHHHhCCCcEE
Q 019957 306 EDLCTSCGLTNY 317 (333)
Q Consensus 306 ~~ll~~aGf~~v 317 (333)
.++|+++||++.
T Consensus 174 ~~~l~~aGf~v~ 185 (259)
T 2p35_A 174 FNALSPKSSRVD 185 (259)
T ss_dssp HHHHGGGEEEEE
T ss_pred HHHHHhcCCceE
Confidence 999999999743
No 31
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.86 E-value=1.4e-20 Score=170.18 Aligned_cols=161 Identities=13% Similarity=0.119 Sum_probs=128.6
Q ss_pred HHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCC
Q 019957 155 FKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA 234 (333)
Q Consensus 155 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~ 234 (333)
++.+.+.+...++.+|||||||+|.++..+++..+ .+|+|+|+|+.+++.++++....++ ..++.++.+|+.++
T Consensus 61 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~--- 134 (302)
T 3hem_A 61 RKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDS--PRRKEVRIQGWEEF--- 134 (302)
T ss_dssp HHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCC--SSCEEEEECCGGGC---
T ss_pred HHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCC--CCceEEEECCHHHc---
Confidence 34556666667788999999999999999999842 5999999999999999999988774 55899999999876
Q ss_pred CCCcceEEeccccccCCCh---------HHHHHHHHHhccCCcEEEEEEecccCCCcch------------hhHHHHHhh
Q 019957 235 SGFVDAVHAGAALHCWPSP---------SNAVAEISRILRSGGVFVGTTFLRYTSSTSL------------TGRVLRERI 293 (333)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~---------~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~------------~~~~~~~~~ 293 (333)
+++||+|++..+++|++|| ..+++++.++|||||++++.++......... +..++....
T Consensus 135 ~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (302)
T 3hem_A 135 DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEI 214 (302)
T ss_dssp CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHT
T ss_pred CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhc
Confidence 6899999999999999887 7899999999999999999998764211000 001122222
Q ss_pred hccCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019957 294 LQNYNYLTEEEIEDLCTSCGLTNYTSKV 321 (333)
Q Consensus 294 ~~~~~~~t~~~l~~ll~~aGf~~v~~~~ 321 (333)
.......+.+++..+++++||+++....
T Consensus 215 ~p~~~~~s~~~~~~~l~~aGf~~~~~~~ 242 (302)
T 3hem_A 215 FPGGRLPRISQVDYYSSNAGWKVERYHR 242 (302)
T ss_dssp CTTCCCCCHHHHHHHHHHHTCEEEEEEE
T ss_pred CCCCCCCCHHHHHHHHHhCCcEEEEEEe
Confidence 2344678899999999999999988654
No 32
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.86 E-value=1.7e-20 Score=158.55 Aligned_cols=160 Identities=19% Similarity=0.177 Sum_probs=129.1
Q ss_pred HHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCC
Q 019957 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG 236 (333)
Q Consensus 157 ~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~ 236 (333)
.+.+.+...++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++....+ ..++.++.+|+.++++ ++
T Consensus 23 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~d~~~~~~-~~ 96 (199)
T 2xvm_A 23 EVLEAVKVVKPGKTLDLGCGNGRNSLYLAANGY--DVDAWDKNAMSIANVERIKSIEN---LDNLHTRVVDLNNLTF-DR 96 (199)
T ss_dssp HHHHHTTTSCSCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHT---CTTEEEEECCGGGCCC-CC
T ss_pred HHHHHhhccCCCeEEEEcCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHhCC---CCCcEEEEcchhhCCC-CC
Confidence 444555555678999999999999999998854 99999999999999999887765 4579999999999887 78
Q ss_pred CcceEEeccccccCC--ChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCC
Q 019957 237 FVDAVHAGAALHCWP--SPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGL 314 (333)
Q Consensus 237 ~fD~V~~~~vl~h~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf 314 (333)
+||+|++..+++|++ ++..+++++.++|||||.+++.++....... ....+...++.+++.+++++ |
T Consensus 97 ~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~~~~~--f 165 (199)
T 2xvm_A 97 QYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYP---------CTVGFPFAFKEGELRRYYEG--W 165 (199)
T ss_dssp CEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSC---------CCSCCSCCBCTTHHHHHTTT--S
T ss_pred CceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcC---------CCCCCCCccCHHHHHHHhcC--C
Confidence 999999999999998 7889999999999999999887765432111 01234557899999999987 9
Q ss_pred cEEEEEEe---------------CeEEEEEEeCC
Q 019957 315 TNYTSKVQ---------------QSFIMFAAQKP 333 (333)
Q Consensus 315 ~~v~~~~~---------------~~~~~~~a~kp 333 (333)
++++.... ..+..++++||
T Consensus 166 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~arK~ 199 (199)
T 2xvm_A 166 ERVKYNEDVGELHRTDANGNRIKLRFATMLARKK 199 (199)
T ss_dssp EEEEEECCEEEEEEECTTSCEEEEEEEEEEEECC
T ss_pred eEEEecccceEEEeecCCCCeeeEEEEEEEEecC
Confidence 88775321 13567888987
No 33
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.86 E-value=8.7e-21 Score=177.20 Aligned_cols=158 Identities=18% Similarity=0.172 Sum_probs=125.9
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhc-----CcCCCCCeEEEEccCCCC------
Q 019957 164 SAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQD-----NTILTSNLALVRADVCRL------ 231 (333)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~~~-----~~~~~~~i~~~~~d~~~l------ 231 (333)
..++.+|||||||+|.++..+++.. +..+|+|+|+|+.+++.+++++... |.....++.++.+|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 4567899999999999999998873 5679999999999999999987643 200136899999999987
Q ss_pred CCCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHh
Q 019957 232 PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTS 311 (333)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~ 311 (333)
++++++||+|++..+++|++++..+|+++.++|||||+|++.++........................++.+++.++|++
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 240 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAE 240 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHH
T ss_pred CCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHH
Confidence 88889999999999999999999999999999999999999987765332222111111122234467889999999999
Q ss_pred CCCcEEEEEE
Q 019957 312 CGLTNYTSKV 321 (333)
Q Consensus 312 aGf~~v~~~~ 321 (333)
+||++++...
T Consensus 241 aGF~~v~~~~ 250 (383)
T 4fsd_A 241 AGFRDVRLVS 250 (383)
T ss_dssp TTCCCEEEEE
T ss_pred CCCceEEEEe
Confidence 9999876544
No 34
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.86 E-value=1.2e-20 Score=161.76 Aligned_cols=165 Identities=16% Similarity=0.163 Sum_probs=123.2
Q ss_pred HHHHHhhc-ccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCC
Q 019957 156 KMAQEYFK-SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA 234 (333)
Q Consensus 156 ~~~~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~ 234 (333)
..+.+.+. ..++.+|||||||+|.++..+++.+. +++|+|+|+.+++.+++ .+ ..++.++.+|+.++ +.
T Consensus 35 ~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~----~~---~~~~~~~~~d~~~~-~~ 104 (218)
T 3ou2_A 35 PAALERLRAGNIRGDVLELASGTGYWTRHLSGLAD--RVTALDGSAEMIAEAGR----HG---LDNVEFRQQDLFDW-TP 104 (218)
T ss_dssp HHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHHSS--EEEEEESCHHHHHHHGG----GC---CTTEEEEECCTTSC-CC
T ss_pred HHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhcCC--eEEEEeCCHHHHHHHHh----cC---CCCeEEEecccccC-CC
Confidence 34444444 44567999999999999999999865 99999999999999987 22 46899999999888 67
Q ss_pred CCCcceEEeccccccCCCh--HHHHHHHHHhccCCcEEEEEEecccCCCcch-hhHHHHHh------hh----ccCCCCC
Q 019957 235 SGFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYTSSTSL-TGRVLRER------IL----QNYNYLT 301 (333)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~-~~~~~~~~------~~----~~~~~~t 301 (333)
+++||+|++..+++|++++ ..+|+++.++|||||.+++.+++........ +....... .. ....+++
T Consensus 105 ~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (218)
T 3ou2_A 105 DRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRS 184 (218)
T ss_dssp SSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCC
T ss_pred CCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCC
Confidence 8899999999999999997 7899999999999999999998764211111 00000000 00 1234789
Q ss_pred HHHHHHHHHhCCCcEEEEEEeCeEEEEEE
Q 019957 302 EEEIEDLCTSCGLTNYTSKVQQSFIMFAA 330 (333)
Q Consensus 302 ~~~l~~ll~~aGf~~v~~~~~~~~~~~~a 330 (333)
.+++.++++++||++.........+..++
T Consensus 185 ~~~~~~~l~~aGf~v~~~~~~~~~~~~~~ 213 (218)
T 3ou2_A 185 PAELTERLTALGWSCSVDEVHPGFLYATC 213 (218)
T ss_dssp HHHHHHHHHHTTEEEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHCCCEEEeeeccccceEeec
Confidence 99999999999999766555544433333
No 35
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.86 E-value=1.5e-21 Score=170.63 Aligned_cols=173 Identities=16% Similarity=0.143 Sum_probs=131.7
Q ss_pred HHHHHHHhhccc--CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC
Q 019957 154 EFKMAQEYFKSA--QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (333)
Q Consensus 154 ~~~~~~~~l~~~--~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (333)
..+.+.+.+... ++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++....+ .++.++.+|+.++
T Consensus 23 ~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~~~~~D~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~ 96 (246)
T 1y8c_A 23 WSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKFK--NTWAVDLSQEMLSEAENKFRSQG----LKPRLACQDISNL 96 (246)
T ss_dssp HHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGSS--EEEEECSCHHHHHHHHHHHHHTT----CCCEEECCCGGGC
T ss_pred HHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCCC--cEEEEECCHHHHHHHHHHHhhcC----CCeEEEecccccC
Confidence 345555555443 678999999999999999998865 89999999999999999887654 2789999999988
Q ss_pred CCCCCCcceEEecc-ccccC---CChHHHHHHHHHhccCCcEEEEEEecccCCCc-----chh------hHHHHH-----
Q 019957 232 PFASGFVDAVHAGA-ALHCW---PSPSNAVAEISRILRSGGVFVGTTFLRYTSST-----SLT------GRVLRE----- 291 (333)
Q Consensus 232 p~~~~~fD~V~~~~-vl~h~---~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~-----~~~------~~~~~~----- 291 (333)
+++ ++||+|++.. +++|+ .++..+|+++.++|||||.+++.+++...... .+. ...|..
T Consensus 97 ~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (246)
T 1y8c_A 97 NIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYKLSQVLGNNDFNYDDDEVFYYWENQFEDD 175 (246)
T ss_dssp CCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHTTTTTCCEEEEETTEEEEEEEEEETT
T ss_pred Ccc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecCHHHHHhhcCcceEEecCCcEEEEEecccCCc
Confidence 876 7999999998 99999 56678999999999999999997765421000 000 000000
Q ss_pred -------------------hhhccCCCCCHHHHHHHHHhCCCcEEEEEEe---------CeEEEEEEeCC
Q 019957 292 -------------------RILQNYNYLTEEEIEDLCTSCGLTNYTSKVQ---------QSFIMFAAQKP 333 (333)
Q Consensus 292 -------------------~~~~~~~~~t~~~l~~ll~~aGf~~v~~~~~---------~~~~~~~a~kp 333 (333)
....+.++++.+++.++|+++||++++.... ...++++++||
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~~~~~~~~~~~~~~~~varK~ 245 (246)
T 1y8c_A 176 LVSMYISFFVRDGEFYKRFDEEHEERAYKEEDIEKYLKHGQLNILDKVDCYSNKKVEKFTERITYLVKLG 245 (246)
T ss_dssp EEEEEEEEEEECSSSEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEESSSSCBCCTTCSEEEEEEEEC
T ss_pred eEEEEEEEEEecCCcccccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEcccccCcCCCCceeEEEEEEec
Confidence 0113457889999999999999999987543 24477888886
No 36
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.86 E-value=2.3e-20 Score=172.31 Aligned_cols=173 Identities=11% Similarity=0.151 Sum_probs=138.2
Q ss_pred HHHHhhcccC-CCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-CC
Q 019957 157 MAQEYFKSAQ-GGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-FA 234 (333)
Q Consensus 157 ~~~~~l~~~~-~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-~~ 234 (333)
.+.+.+...+ +.+|||||||+|.++..+++.+|..+++++|+ +.+++.+++++...++ ..++.++.+|+.+.+ +.
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~ 245 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDL--GGRVEFFEKNLLDARNFE 245 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTC--GGGEEEEECCTTCGGGGT
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCC--CCceEEEeCCcccCcccC
Confidence 3444444455 78999999999999999999988889999999 8899999998887664 457999999998765 13
Q ss_pred CCCcceEEeccccccCCCh--HHHHHHHHHhccCCcEEEEEEecccCCC-cchhhHHHHHh---hhccCCCCCHHHHHHH
Q 019957 235 SGFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYTSS-TSLTGRVLRER---ILQNYNYLTEEEIEDL 308 (333)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~t~~~l~~l 308 (333)
.+.||+|++.+++||++++ ..+|++++++|||||++++.++...... .+.....+.-. ...+...++.++|+++
T Consensus 246 ~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~l 325 (352)
T 3mcz_A 246 GGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGV 325 (352)
T ss_dssp TCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHH
T ss_pred CCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHH
Confidence 4579999999999999877 7899999999999999999998765332 23222222111 1234567899999999
Q ss_pred HHhCCCcEEEEEEeCeEEEEEEeCC
Q 019957 309 CTSCGLTNYTSKVQQSFIMFAAQKP 333 (333)
Q Consensus 309 l~~aGf~~v~~~~~~~~~~~~a~kp 333 (333)
++++||++++ ...+.+.+++++||
T Consensus 326 l~~aGf~~~~-~~~g~~~l~~a~kp 349 (352)
T 3mcz_A 326 VRDAGLAVGE-RSIGRYTLLIGQRS 349 (352)
T ss_dssp HHHTTCEEEE-EEETTEEEEEEECC
T ss_pred HHHCCCceee-eccCceEEEEEecC
Confidence 9999999998 55677999999997
No 37
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.86 E-value=4.2e-21 Score=171.54 Aligned_cols=151 Identities=23% Similarity=0.310 Sum_probs=122.0
Q ss_pred HHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCC
Q 019957 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG 236 (333)
Q Consensus 157 ~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~ 236 (333)
.+.+.+...++.+|||||||+|.++..+++. ..+|+|+|+|+.+++.++++ .+++.++.+|+..+++ ++
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~-~~ 116 (279)
T 3ccf_A 48 DLLQLLNPQPGEFILDLGCGTGQLTEKIAQS--GAEVLGTDNAATMIEKARQN--------YPHLHFDVADARNFRV-DK 116 (279)
T ss_dssp HHHHHHCCCTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHH--------CTTSCEEECCTTTCCC-SS
T ss_pred HHHHHhCCCCCCEEEEecCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHhh--------CCCCEEEECChhhCCc-CC
Confidence 3445566667789999999999999999984 45999999999999999886 3578899999999887 57
Q ss_pred CcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHH----------hhhccCCCCCHHHHH
Q 019957 237 FVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRE----------RILQNYNYLTEEEIE 306 (333)
Q Consensus 237 ~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~t~~~l~ 306 (333)
+||+|++..+++|++|+..+++++.++|||||++++.++.... ...+ ...+.. ....+..+++.+++.
T Consensus 117 ~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (279)
T 3ccf_A 117 PLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGKGN-IKYI-LEALYNALETLGIHNPQALNPWYFPSIGEYV 194 (279)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECTTT-THHH-HHHHHHHHHHHTCCCGGGGCCCCCCCHHHHH
T ss_pred CcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCCcc-hHHH-HHHHHHHHHhcCCccccCcCceeCCCHHHHH
Confidence 9999999999999999999999999999999999998876532 1111 111111 112345678999999
Q ss_pred HHHHhCCCcEEEEE
Q 019957 307 DLCTSCGLTNYTSK 320 (333)
Q Consensus 307 ~ll~~aGf~~v~~~ 320 (333)
.+++++||++++..
T Consensus 195 ~~l~~aGf~~~~~~ 208 (279)
T 3ccf_A 195 NILEKQGFDVTYAA 208 (279)
T ss_dssp HHHHHHTEEEEEEE
T ss_pred HHHHHcCCEEEEEE
Confidence 99999999988754
No 38
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.86 E-value=2.4e-21 Score=170.36 Aligned_cols=155 Identities=9% Similarity=0.013 Sum_probs=123.7
Q ss_pred HHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCC
Q 019957 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG 236 (333)
Q Consensus 157 ~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~ 236 (333)
.+...+...++.+|||||||+|.++..+++.+ ..+++|+|+|+.+++.++++... ..++.++.+|+..++++++
T Consensus 84 ~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~~d~~~~~~~~~ 157 (254)
T 1xtp_A 84 NFIASLPGHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAG-----MPVGKFILASMETATLPPN 157 (254)
T ss_dssp HHHHTSTTCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTT-----SSEEEEEESCGGGCCCCSS
T ss_pred HHHHhhcccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhcc-----CCceEEEEccHHHCCCCCC
Confidence 34444455567899999999999999998886 44799999999999999987654 2579999999999988888
Q ss_pred CcceEEeccccccCC--ChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCC
Q 019957 237 FVDAVHAGAALHCWP--SPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGL 314 (333)
Q Consensus 237 ~fD~V~~~~vl~h~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf 314 (333)
+||+|++..+++|++ ++..+|+++.++|||||++++.++...... +.. ....+..+++.+++.++++++||
T Consensus 158 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~--~~~-----~~~~~~~~~~~~~~~~~l~~aGf 230 (254)
T 1xtp_A 158 TYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDR--FLV-----DKEDSSLTRSDIHYKRLFNESGV 230 (254)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CC--EEE-----ETTTTEEEBCHHHHHHHHHHHTC
T ss_pred CeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCccc--cee-----cccCCcccCCHHHHHHHHHHCCC
Confidence 999999999999995 478999999999999999999986432111 100 11133446799999999999999
Q ss_pred cEEEEEEeCe
Q 019957 315 TNYTSKVQQS 324 (333)
Q Consensus 315 ~~v~~~~~~~ 324 (333)
++++......
T Consensus 231 ~~~~~~~~~~ 240 (254)
T 1xtp_A 231 RVVKEAFQEE 240 (254)
T ss_dssp CEEEEEECTT
T ss_pred EEEEeeecCC
Confidence 9998765443
No 39
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.86 E-value=4.5e-20 Score=170.89 Aligned_cols=173 Identities=14% Similarity=0.137 Sum_probs=137.9
Q ss_pred HHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCC
Q 019957 155 FKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA 234 (333)
Q Consensus 155 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~ 234 (333)
.+.+.+.+...++.+|||||||+|.++..+++.++..+++++|+ +.+++.+++++...++ ..++.++.+|+.+.+++
T Consensus 179 ~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~ 255 (359)
T 1x19_A 179 IQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGV--ADRMRGIAVDIYKESYP 255 (359)
T ss_dssp HHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTC--TTTEEEEECCTTTSCCC
T ss_pred HHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCC--CCCEEEEeCccccCCCC
Confidence 34555555556678999999999999999999988889999999 9999999999887764 45699999999887765
Q ss_pred CCCcceEEeccccccCCC--hHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhh--h----ccCCCCCHHHHH
Q 019957 235 SGFVDAVHAGAALHCWPS--PSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERI--L----QNYNYLTEEEIE 306 (333)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~t~~~l~ 306 (333)
+ +|+|++..++||+++ ..++|++++++|||||++++.++..+....+.....+ ... . ....+++.++|.
T Consensus 256 ~--~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~t~~e~~ 332 (359)
T 1x19_A 256 E--ADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLS-HYILGAGMPFSVLGFKEQARYK 332 (359)
T ss_dssp C--CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHH-HHGGGGGSSCCCCCCCCGGGHH
T ss_pred C--CCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHH-HHHHhcCCCCcccCCCCHHHHH
Confidence 4 399999999999988 6789999999999999999998776433222222222 111 1 122348999999
Q ss_pred HHHHhCCCcEEEEEEeCeEEEEEEeCC
Q 019957 307 DLCTSCGLTNYTSKVQQSFIMFAAQKP 333 (333)
Q Consensus 307 ~ll~~aGf~~v~~~~~~~~~~~~a~kp 333 (333)
++++++||++++........++.++||
T Consensus 333 ~ll~~aGf~~v~~~~~~~~~vi~a~kp 359 (359)
T 1x19_A 333 EILESLGYKDVTMVRKYDHLLVQAVKP 359 (359)
T ss_dssp HHHHHHTCEEEEEEEETTEEEEEEECC
T ss_pred HHHHHCCCceEEEEecCCceEEEEeCC
Confidence 999999999998766556778889987
No 40
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.86 E-value=2.1e-20 Score=167.59 Aligned_cols=162 Identities=13% Similarity=0.150 Sum_probs=126.7
Q ss_pred HHHHHHhh-cccCCCeEEEEcCCcCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC
Q 019957 155 FKMAQEYF-KSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP 232 (333)
Q Consensus 155 ~~~~~~~l-~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp 232 (333)
...+.+.+ ...++.+|||||||+|.++..+++..+ ..+|+|+|+|+.+++.+++++...+ .++.++.+|+.+++
T Consensus 10 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~----~~v~~~~~d~~~~~ 85 (284)
T 3gu3_A 10 VSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP----YDSEFLEGDATEIE 85 (284)
T ss_dssp HHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSS----SEEEEEESCTTTCC
T ss_pred HHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcC----CceEEEEcchhhcC
Confidence 34444444 445678999999999999999999866 3699999999999999999887643 38999999999988
Q ss_pred CCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEec-----cc----CCC------cchhhHHHHH-hhhcc
Q 019957 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL-----RY----TSS------TSLTGRVLRE-RILQN 296 (333)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~-----~~----~~~------~~~~~~~~~~-~~~~~ 296 (333)
+ +++||+|++..+++|++++..+++++.++|||||.+++.++. .. ... ...+...+.. .....
T Consensus 86 ~-~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (284)
T 3gu3_A 86 L-NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNG 164 (284)
T ss_dssp C-SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTC
T ss_pred c-CCCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhhhhc
Confidence 7 469999999999999999999999999999999999999987 11 000 1111222221 11234
Q ss_pred CCCCCHHHHHHHHHhCCCcEEEEEE
Q 019957 297 YNYLTEEEIEDLCTSCGLTNYTSKV 321 (333)
Q Consensus 297 ~~~~t~~~l~~ll~~aGf~~v~~~~ 321 (333)
..+.+.+++..+++++||+.++...
T Consensus 165 ~~~~~~~~l~~~l~~aGF~~v~~~~ 189 (284)
T 3gu3_A 165 KDGNIGMKIPIYLSELGVKNIECRV 189 (284)
T ss_dssp CCTTGGGTHHHHHHHTTCEEEEEEE
T ss_pred ccccHHHHHHHHHHHcCCCeEEEEE
Confidence 4566778999999999999988644
No 41
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.85 E-value=9.7e-21 Score=165.41 Aligned_cols=153 Identities=13% Similarity=0.171 Sum_probs=122.4
Q ss_pred HHHHHHHhhcc-cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC-
Q 019957 154 EFKMAQEYFKS-AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL- 231 (333)
Q Consensus 154 ~~~~~~~~l~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l- 231 (333)
..+.+...+.. .++.+|||||||+|.++..+++.+. +++|+|+|+.+++.+++ ++.++.+|+.+.
T Consensus 28 ~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~-----------~~~~~~~d~~~~~ 94 (240)
T 3dli_A 28 VKARLRRYIPYFKGCRRVLDIGCGRGEFLELCKEEGI--ESIGVDINEDMIKFCEG-----------KFNVVKSDAIEYL 94 (240)
T ss_dssp HHHHHGGGGGGTTTCSCEEEETCTTTHHHHHHHHHTC--CEEEECSCHHHHHHHHT-----------TSEEECSCHHHHH
T ss_pred HHHHHHHHHhhhcCCCeEEEEeCCCCHHHHHHHhCCC--cEEEEECCHHHHHHHHh-----------hcceeeccHHHHh
Confidence 33444444442 3568999999999999999999865 89999999999999886 277888998775
Q ss_pred -CCCCCCcceEEeccccccCCCh--HHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHH
Q 019957 232 -PFASGFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDL 308 (333)
Q Consensus 232 -p~~~~~fD~V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~l 308 (333)
++++++||+|++..+++|++++ ..+++++.++|||||++++.+++.... ..+ ... ...+.+..+++.+++..+
T Consensus 95 ~~~~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~~~-~~~--~~~~~~~~~~~~~~l~~~ 170 (240)
T 3dli_A 95 KSLPDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSL-YSL-INF--YIDPTHKKPVHPETLKFI 170 (240)
T ss_dssp HTSCTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSH-HHH-HHH--TTSTTCCSCCCHHHHHHH
T ss_pred hhcCCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchh-HHH-HHH--hcCccccccCCHHHHHHH
Confidence 7778999999999999999966 899999999999999999999875321 111 111 123467788999999999
Q ss_pred HHhCCCcEEEEEEeC
Q 019957 309 CTSCGLTNYTSKVQQ 323 (333)
Q Consensus 309 l~~aGf~~v~~~~~~ 323 (333)
++++||++++.....
T Consensus 171 l~~aGf~~~~~~~~~ 185 (240)
T 3dli_A 171 LEYLGFRDVKIEFFE 185 (240)
T ss_dssp HHHHTCEEEEEEEEC
T ss_pred HHHCCCeEEEEEEec
Confidence 999999998866544
No 42
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.85 E-value=2.3e-20 Score=161.85 Aligned_cols=152 Identities=20% Similarity=0.252 Sum_probs=123.6
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcC--CCCCeEEEEccCCCCCCCCCCcceEEe
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI--LTSNLALVRADVCRLPFASGFVDAVHA 243 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~--~~~~i~~~~~d~~~lp~~~~~fD~V~~ 243 (333)
++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++....++. ...++.++.+|+..+++.+++||+|++
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGY--SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 577999999999999999999854 9999999999999999988765431 013689999999999988899999999
Q ss_pred ccccccCCChH---HHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhh-------------------hccCCCCC
Q 019957 244 GAALHCWPSPS---NAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERI-------------------LQNYNYLT 301 (333)
Q Consensus 244 ~~vl~h~~d~~---~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~t 301 (333)
..+++|++++. .+++++.++|||||++++.++..... .+.+...+.... ..+.++++
T Consensus 108 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (235)
T 3sm3_A 108 QAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWH-LKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFT 186 (235)
T ss_dssp ESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTT-SHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBC
T ss_pred cchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchh-HHHHHHHhhhhccchhhhcceEecccccCCcceeeEeCC
Confidence 99999999998 89999999999999999999876422 222122211111 12346899
Q ss_pred HHHHHHHHHhCCCcEEEEE
Q 019957 302 EEEIEDLCTSCGLTNYTSK 320 (333)
Q Consensus 302 ~~~l~~ll~~aGf~~v~~~ 320 (333)
.+++.++++++||++++..
T Consensus 187 ~~~l~~ll~~aGf~~~~~~ 205 (235)
T 3sm3_A 187 EKELVFLLTDCRFEIDYFR 205 (235)
T ss_dssp HHHHHHHHHTTTEEEEEEE
T ss_pred HHHHHHHHHHcCCEEEEEE
Confidence 9999999999999998864
No 43
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.85 E-value=1.7e-20 Score=161.68 Aligned_cols=147 Identities=20% Similarity=0.325 Sum_probs=121.2
Q ss_pred CCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEeccc
Q 019957 167 GGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAA 246 (333)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~v 246 (333)
+.+|||||||+|.++..+... +|+|+|+.+++.++++ ++.++.+|+..+++.+++||+|++..+
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~----------~~~~~~~d~~~~~~~~~~fD~v~~~~~ 111 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR----------GVFVLKGTAENLPLKDESFDFALMVTT 111 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT----------TCEEEECBTTBCCSCTTCEEEEEEESC
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc----------CCEEEEcccccCCCCCCCeeEEEEcch
Confidence 779999999999999887653 9999999999999873 578999999999888889999999999
Q ss_pred cccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHH-----hhhccCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019957 247 LHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRE-----RILQNYNYLTEEEIEDLCTSCGLTNYTSKV 321 (333)
Q Consensus 247 l~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~t~~~l~~ll~~aGf~~v~~~~ 321 (333)
++|++++..+|+++.++|||||.+++.++...... ...+.. ....+..+++.+++.++++++||++++...
T Consensus 112 l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~ 187 (219)
T 1vlm_A 112 ICFVDDPERALKEAYRILKKGGYLIVGIVDRESFL----GREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQ 187 (219)
T ss_dssp GGGSSCHHHHHHHHHHHEEEEEEEEEEEECSSSHH----HHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred HhhccCHHHHHHHHHHHcCCCcEEEEEEeCCccHH----HHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEec
Confidence 99999999999999999999999999998754211 111111 112456779999999999999999988643
Q ss_pred eC--------------------eEEEEEEeCC
Q 019957 322 QQ--------------------SFIMFAAQKP 333 (333)
Q Consensus 322 ~~--------------------~~~~~~a~kp 333 (333)
.. .|+++.|+|.
T Consensus 188 ~~~~~p~~~~~~~~~~~~~~~~~~~~i~a~K~ 219 (219)
T 1vlm_A 188 TLFKHPSELSEIEPVKEGYGEGAFVVIRGTKK 219 (219)
T ss_dssp ECCSCGGGCSSCCCCEESSSSSSEEEEEEECC
T ss_pred ccCCCCCccccchhhhcCCCCCeEEEEEecCC
Confidence 21 5888888874
No 44
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.85 E-value=7.4e-21 Score=171.20 Aligned_cols=149 Identities=9% Similarity=0.075 Sum_probs=110.8
Q ss_pred cCCCeEEEEcCCcCHHHH----HHHHhCCCCeE--EEEeCCHHHHHHHHHHHHhcCcCCCCCeE--EEEccCCCCC----
Q 019957 165 AQGGLLVDVSCGSGLFSR----KFAKSGTYSGV--VALDFSENMLRQCYDFIKQDNTILTSNLA--LVRADVCRLP---- 232 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~----~l~~~~~~~~v--~g~D~s~~~~~~a~~~~~~~~~~~~~~i~--~~~~d~~~lp---- 232 (333)
.++.+|||||||+|.++. .+...++...+ +|+|+|+.|++.+++++...+. ..++. +..+++++++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~ 128 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSN--LENVKFAWHKETSSEYQSRML 128 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSS--CTTEEEEEECSCHHHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccC--CCcceEEEEecchhhhhhhhc
Confidence 356799999999997654 34444555544 9999999999999998765321 23444 4455555443
Q ss_pred --CCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhh-----hccCCCCCHHHH
Q 019957 233 --FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERI-----LQNYNYLTEEEI 305 (333)
Q Consensus 233 --~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~t~~~l 305 (333)
+.+++||+|++..++||++|+..+|++++++|||||++++........ + ...+.... ..+..+++.+++
T Consensus 129 ~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (292)
T 2aot_A 129 EKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGSSG---W-DKLWKKYGSRFPQDDLCQYITSDDL 204 (292)
T ss_dssp TTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTTSH---H-HHHHHHHGGGSCCCTTCCCCCHHHH
T ss_pred cccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecCCcc---H-HHHHHHHHHhccCCCcccCCCHHHH
Confidence 557899999999999999999999999999999999999987654321 1 22222211 135678999999
Q ss_pred HHHHHhCCCcEEEE
Q 019957 306 EDLCTSCGLTNYTS 319 (333)
Q Consensus 306 ~~ll~~aGf~~v~~ 319 (333)
..+|+++||+++..
T Consensus 205 ~~~l~~aGf~~~~~ 218 (292)
T 2aot_A 205 TQMLDNLGLKYECY 218 (292)
T ss_dssp HHHHHHHTCCEEEE
T ss_pred HHHHHHCCCceEEE
Confidence 99999999998764
No 45
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.85 E-value=2e-20 Score=162.77 Aligned_cols=138 Identities=14% Similarity=0.156 Sum_probs=115.9
Q ss_pred CCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEeccc
Q 019957 167 GGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAA 246 (333)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~v 246 (333)
+.+|||||||+|.++..+++.+. +|+|+|+|+.+++.++++....+. ..++.++.+|+.+++. +++||+|++..+
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~-~~~fD~v~~~~~ 141 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASPER--FVVGLDISESALAKANETYGSSPK--AEYFSFVKEDVFTWRP-TELFDLIFDYVF 141 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBTTE--EEEEECSCHHHHHHHHHHHTTSGG--GGGEEEECCCTTTCCC-SSCEEEEEEESS
T ss_pred CCCEEEeCCCCCHHHHHHHhCCC--eEEEEECCHHHHHHHHHHhhccCC--CcceEEEECchhcCCC-CCCeeEEEEChh
Confidence 45999999999999999987654 899999999999999998876432 4579999999998773 569999999999
Q ss_pred cccCC--ChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019957 247 LHCWP--SPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSKV 321 (333)
Q Consensus 247 l~h~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf~~v~~~~ 321 (333)
++|++ ++..+++++.++|||||++++.++..... ...+...++.+++..+++++||++++...
T Consensus 142 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 206 (235)
T 3lcc_A 142 FCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDH------------VGGPPYKVDVSTFEEVLVPIGFKAVSVEE 206 (235)
T ss_dssp TTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCC------------CSCSSCCCCHHHHHHHHGGGTEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHHHHCCCCcEEEEEEeccccc------------CCCCCccCCHHHHHHHHHHcCCeEEEEEe
Confidence 99998 88899999999999999999988654311 11233458999999999999999988643
No 46
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.85 E-value=4.5e-21 Score=169.80 Aligned_cols=157 Identities=20% Similarity=0.197 Sum_probs=120.2
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEecc
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 245 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~ 245 (333)
++.+|||||||+|.++..+++.+. +++|+|+|+.+++.++++ ..++.++.+|+.++++ +++||+|++..
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~-~~~fD~v~~~~ 118 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFG--TVEGLELSADMLAIARRR--------NPDAVLHHGDMRDFSL-GRRFSAVTCMF 118 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSS--EEEEEESCHHHHHHHHHH--------CTTSEEEECCTTTCCC-SCCEEEEEECT
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCC--eEEEEECCHHHHHHHHhh--------CCCCEEEECChHHCCc-cCCcCEEEEcC
Confidence 457999999999999999999876 999999999999999986 4478999999999887 78999999998
Q ss_pred -ccccCC---ChHHHHHHHHHhccCCcEEEEEEecccCCCcch-------------hhH---------------HH----
Q 019957 246 -ALHCWP---SPSNAVAEISRILRSGGVFVGTTFLRYTSSTSL-------------TGR---------------VL---- 289 (333)
Q Consensus 246 -vl~h~~---d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~-------------~~~---------------~~---- 289 (333)
+++|++ +...+|+++.++|||||++++.++..+....+. +.. .+
T Consensus 119 ~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (263)
T 3pfg_A 119 SSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAG 198 (263)
T ss_dssp TGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred chhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEec
Confidence 999996 445789999999999999999754332111000 000 00
Q ss_pred -----HH-hhhccCCCCCHHHHHHHHHhCCCcEEEEEEe-CeEEEEEEeCC
Q 019957 290 -----RE-RILQNYNYLTEEEIEDLCTSCGLTNYTSKVQ-QSFIMFAAQKP 333 (333)
Q Consensus 290 -----~~-~~~~~~~~~t~~~l~~ll~~aGf~~v~~~~~-~~~~~~~a~kp 333 (333)
.. ....+.++|+.+++.++|+++||+++++... ....+++++||
T Consensus 199 ~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~~~~~va~K~ 249 (263)
T 3pfg_A 199 PDRGITHHEESHRITLFTREQYERAFTAAGLSVEFMPGGPSGRGLFTGLPG 249 (263)
T ss_dssp TTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEEC
T ss_pred CCCcEEEEEEEEEEEeecHHHHHHHHHHCCCEEEEeeCCCCCceeEEEecC
Confidence 00 0012366899999999999999999886332 22356777775
No 47
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.85 E-value=4.8e-20 Score=160.83 Aligned_cols=158 Identities=21% Similarity=0.189 Sum_probs=123.8
Q ss_pred HHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCC
Q 019957 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (333)
Q Consensus 156 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (333)
..+...+...++.+|||||||+|.++..+++.+ ..+++|+|+|+.+++.++++.. ..++.++.+|+..+++++
T Consensus 33 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~~~ 105 (243)
T 3bkw_A 33 PALRAMLPEVGGLRIVDLGCGFGWFCRWAHEHG-ASYVLGLDLSEKMLARARAAGP------DTGITYERADLDKLHLPQ 105 (243)
T ss_dssp HHHHHHSCCCTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHTSC------SSSEEEEECCGGGCCCCT
T ss_pred HHHHHhccccCCCEEEEEcCcCCHHHHHHHHCC-CCeEEEEcCCHHHHHHHHHhcc------cCCceEEEcChhhccCCC
Confidence 456666666678899999999999999999885 3489999999999999988643 236899999999988888
Q ss_pred CCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccC--C-Ccchh-----------h---------HHHHHh
Q 019957 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYT--S-STSLT-----------G---------RVLRER 292 (333)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~--~-~~~~~-----------~---------~~~~~~ 292 (333)
++||+|++..+++|++++..+++++.++|||||++++.+++... . ...|. . ..+..
T Consensus 106 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 184 (243)
T 3bkw_A 106 DSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLA- 184 (243)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHH-
T ss_pred CCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeecc-
Confidence 89999999999999999999999999999999999998865320 0 00000 0 00100
Q ss_pred hhccCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019957 293 ILQNYNYLTEEEIEDLCTSCGLTNYTSKV 321 (333)
Q Consensus 293 ~~~~~~~~t~~~l~~ll~~aGf~~v~~~~ 321 (333)
...+..+++.+++.++|+++||++++...
T Consensus 185 ~~~~~~~~t~~~~~~~l~~aGF~~~~~~~ 213 (243)
T 3bkw_A 185 KGVVKHHRTVGTTLNALIRSGFAIEHVEE 213 (243)
T ss_dssp HSCCEEECCHHHHHHHHHHTTCEEEEEEE
T ss_pred CceEEEeccHHHHHHHHHHcCCEeeeecc
Confidence 11233447999999999999999988653
No 48
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.85 E-value=4.9e-20 Score=164.05 Aligned_cols=163 Identities=13% Similarity=0.178 Sum_probs=127.3
Q ss_pred HHHHHhhcccCCCeEEEEcCCcCHHHHHHHHh-CCCCeEEEEeCCHH------HHHHHHHHHHhcCcCCCCCeEEEEcc-
Q 019957 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSEN------MLRQCYDFIKQDNTILTSNLALVRAD- 227 (333)
Q Consensus 156 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~------~~~~a~~~~~~~~~~~~~~i~~~~~d- 227 (333)
..+.+.+...++.+|||||||+|.++..+++. ++..+++|+|+|+. +++.+++++...++ ..++.++.+|
T Consensus 33 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~ 110 (275)
T 3bkx_A 33 LAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPL--GDRLTVHFNTN 110 (275)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTT--GGGEEEECSCC
T ss_pred HHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCC--CCceEEEECCh
Confidence 45555666677889999999999999999988 45579999999997 99999999887653 3689999998
Q ss_pred --CCCCCCCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHH---HH-----Hh----h
Q 019957 228 --VCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRV---LR-----ER----I 293 (333)
Q Consensus 228 --~~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~---~~-----~~----~ 293 (333)
...+|+.+++||+|++..+++|++++..+++.+.++++|||++++.++............. +. .. .
T Consensus 111 ~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (275)
T 3bkx_A 111 LSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSDV 190 (275)
T ss_dssp TTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCTT
T ss_pred hhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhcccccc
Confidence 4556677889999999999999999998777777888889999999987643221111110 11 10 1
Q ss_pred hccCCCCCHHHHHHHHHhCCCcEEEEE
Q 019957 294 LQNYNYLTEEEIEDLCTSCGLTNYTSK 320 (333)
Q Consensus 294 ~~~~~~~t~~~l~~ll~~aGf~~v~~~ 320 (333)
..+..+++.+++.++++++||++++..
T Consensus 191 ~~~~~~~s~~~l~~~l~~aGf~~~~~~ 217 (275)
T 3bkx_A 191 ANIRTLITPDTLAQIAHDNTWTYTAGT 217 (275)
T ss_dssp CSCCCCCCHHHHHHHHHHHTCEEEECC
T ss_pred ccccccCCHHHHHHHHHHCCCeeEEEE
Confidence 234468999999999999999998743
No 49
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.85 E-value=8.2e-21 Score=161.89 Aligned_cols=147 Identities=12% Similarity=0.092 Sum_probs=113.2
Q ss_pred HhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCc---------CCCCCeEEEEccCCC
Q 019957 160 EYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNT---------ILTSNLALVRADVCR 230 (333)
Q Consensus 160 ~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~---------~~~~~i~~~~~d~~~ 230 (333)
..+...++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.|+++...... ....++.++++|+.+
T Consensus 16 ~~l~~~~~~~vLD~GCG~G~~~~~la~~g~--~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~ 93 (203)
T 1pjz_A 16 SSLNVVPGARVLVPLCGKSQDMSWLSGQGY--HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFA 93 (203)
T ss_dssp HHHCCCTTCEEEETTTCCSHHHHHHHHHCC--EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSS
T ss_pred HhcccCCCCEEEEeCCCCcHhHHHHHHCCC--eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcccc
Confidence 334445678999999999999999999875 999999999999999987643100 003579999999999
Q ss_pred CCCCC-CCcceEEeccccccCCCh--HHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHH
Q 019957 231 LPFAS-GFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIED 307 (333)
Q Consensus 231 lp~~~-~~fD~V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ 307 (333)
+++.+ ++||+|++..+++|++.. ..++++++++|||||++++.+...... ........++.+++..
T Consensus 94 l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~-----------~~~~~~~~~~~~el~~ 162 (203)
T 1pjz_A 94 LTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQA-----------LLEGPPFSVPQTWLHR 162 (203)
T ss_dssp STHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSS-----------SSSSCCCCCCHHHHHH
T ss_pred CCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCcc-----------ccCCCCCCCCHHHHHH
Confidence 98765 799999999999999754 468999999999999966655433210 0111223478999999
Q ss_pred HHHhCCCcEEEEE
Q 019957 308 LCTSCGLTNYTSK 320 (333)
Q Consensus 308 ll~~aGf~~v~~~ 320 (333)
++++ ||+++...
T Consensus 163 ~~~~-gf~i~~~~ 174 (203)
T 1pjz_A 163 VMSG-NWEVTKVG 174 (203)
T ss_dssp TSCS-SEEEEEEE
T ss_pred HhcC-CcEEEEec
Confidence 9998 99987643
No 50
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.85 E-value=1.7e-19 Score=167.59 Aligned_cols=170 Identities=11% Similarity=0.093 Sum_probs=135.9
Q ss_pred HHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCC
Q 019957 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG 236 (333)
Q Consensus 157 ~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~ 236 (333)
.+.+.+...+..+|||||||+|.++..+++.+|..+++++|+ +.+++.+++++...++ ..++.++.+|+. .+++.
T Consensus 193 ~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l--~~~v~~~~~d~~-~~~p~- 267 (369)
T 3gwz_A 193 QVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGL--ADRCEILPGDFF-ETIPD- 267 (369)
T ss_dssp HHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC--TTTEEEEECCTT-TCCCS-
T ss_pred HHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCc--CCceEEeccCCC-CCCCC-
Confidence 344444445678999999999999999999988889999999 9999999999888765 578999999998 45544
Q ss_pred CcceEEeccccccCCChH--HHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHH--hhhccCCCCCHHHHHHHHHhC
Q 019957 237 FVDAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRE--RILQNYNYLTEEEIEDLCTSC 312 (333)
Q Consensus 237 ~fD~V~~~~vl~h~~d~~--~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~t~~~l~~ll~~a 312 (333)
.||+|++..++||++++. ++|++++++|||||+|++.++.......+. ...+.- ........++.++|+++++++
T Consensus 268 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~-~~~~d~~~~~~~~g~~~t~~e~~~ll~~a 346 (369)
T 3gwz_A 268 GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAAS-TLFVDLLLLVLVGGAERSESEFAALLEKS 346 (369)
T ss_dssp SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHH-HHHHHHHHHHHHSCCCBCHHHHHHHHHTT
T ss_pred CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCc-hhHhhHHHHhhcCCccCCHHHHHHHHHHC
Confidence 899999999999999886 799999999999999999998765433332 111111 112445678999999999999
Q ss_pred CCcEEEEEE--eCeEEEEEEeC
Q 019957 313 GLTNYTSKV--QQSFIMFAAQK 332 (333)
Q Consensus 313 Gf~~v~~~~--~~~~~~~~a~k 332 (333)
||+++++.. .+.+.++.++|
T Consensus 347 Gf~~~~~~~~~~~~~svie~~~ 368 (369)
T 3gwz_A 347 GLRVERSLPCGAGPVRIVEIRR 368 (369)
T ss_dssp TEEEEEEEECSSSSEEEEEEEE
T ss_pred CCeEEEEEECCCCCcEEEEEEe
Confidence 999999866 45566776665
No 51
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.84 E-value=5.4e-20 Score=168.53 Aligned_cols=161 Identities=17% Similarity=0.135 Sum_probs=127.1
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEec
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~ 244 (333)
.+..+|||||||+|.++..+++.+|..+++++|+ +.+++.+++++...++ ..++.++.+|+. .+++. +||+|++.
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~--~~~v~~~~~d~~-~~~p~-~~D~v~~~ 242 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGL--SGRAQVVVGSFF-DPLPA-GAGGYVLS 242 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC--TTTEEEEECCTT-SCCCC-SCSEEEEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCc--CcCeEEecCCCC-CCCCC-CCcEEEEe
Confidence 3457999999999999999999988889999999 9999999999887764 578999999996 34444 89999999
Q ss_pred cccccCCCh--HHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCCcEEEEEEe
Q 019957 245 AALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSKVQ 322 (333)
Q Consensus 245 ~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf~~v~~~~~ 322 (333)
+++||++++ .++|++++++|||||++++.++..... .+.....+..........++.++|.++++++||+++++...
T Consensus 243 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~-~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~ 321 (332)
T 3i53_A 243 AVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDE-HAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAHPI 321 (332)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC----CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEEEC
T ss_pred hhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCC-CccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEEEC
Confidence 999999987 789999999999999999998766533 22111111111124456789999999999999999987765
Q ss_pred CeEEEEEEe
Q 019957 323 QSFIMFAAQ 331 (333)
Q Consensus 323 ~~~~~~~a~ 331 (333)
..+.++.++
T Consensus 322 ~~~~vie~r 330 (332)
T 3i53_A 322 SYVSIVEMT 330 (332)
T ss_dssp SSSEEEEEE
T ss_pred CCcEEEEEe
Confidence 545555544
No 52
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.84 E-value=2.5e-20 Score=164.63 Aligned_cols=150 Identities=20% Similarity=0.224 Sum_probs=117.8
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEe
Q 019957 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (333)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 243 (333)
..++.+|||||||+|.++..+++.+. +++|+|+|+.+++.+++++ ..+ ..++.++.+|+.++++++++||+|++
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~-~~~---~~~~~~~~~d~~~~~~~~~~fD~v~~ 110 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIARGY--RYIALDADAAMLEVFRQKI-AGV---DRKVQVVQADARAIPLPDESVHGVIV 110 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTTTC--EEEEEESCHHHHHHHHHHT-TTS---CTTEEEEESCTTSCCSCTTCEEEEEE
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHCCC--EEEEEECCHHHHHHHHHHh-hcc---CCceEEEEcccccCCCCCCCeeEEEE
Confidence 45678999999999999999998754 9999999999999999987 222 56899999999999988899999999
Q ss_pred ccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHH---hhh----ccCCCCCHHHHHHHHHhCCCcE
Q 019957 244 GAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRE---RIL----QNYNYLTEEEIEDLCTSCGLTN 316 (333)
Q Consensus 244 ~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~t~~~l~~ll~~aGf~~ 316 (333)
..+++|++++..+++++.++|||||.+++............+...+.. ... .+..+++.+++.++++++||++
T Consensus 111 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 190 (263)
T 2yqz_A 111 VHLWHLVPDWPKVLAEAIRVLKPGGALLEGWDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGLKP 190 (263)
T ss_dssp ESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTCCC
T ss_pred CCchhhcCCHHHHHHHHHHHCCCCcEEEEEecCCCccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCCCc
Confidence 999999999999999999999999999988322210110001111111 111 1345678899999999999997
Q ss_pred EEE
Q 019957 317 YTS 319 (333)
Q Consensus 317 v~~ 319 (333)
+..
T Consensus 191 ~~~ 193 (263)
T 2yqz_A 191 RTR 193 (263)
T ss_dssp EEE
T ss_pred ceE
Confidence 763
No 53
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.84 E-value=4.9e-21 Score=169.80 Aligned_cols=162 Identities=19% Similarity=0.273 Sum_probs=117.4
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcC--C------------------------
Q 019957 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI--L------------------------ 217 (333)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~--~------------------------ 217 (333)
..++.+|||||||+|.++..++..+ ..+|+|+|+|+.|++.|+++++..... +
T Consensus 53 ~~~g~~vLDiGCG~G~~~~~~~~~~-~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIYQVLAACDS-FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp SCCEEEEEESSCTTCCGGGTTGGGT-EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCCceEEEeCCCccHHHHHHHHhh-hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 4467789999999998877766665 237999999999999999876543100 0
Q ss_pred CCCeE-EEEccCCCC-CC---CCCCcceEEeccccccC-C---ChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHH
Q 019957 218 TSNLA-LVRADVCRL-PF---ASGFVDAVHAGAALHCW-P---SPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRV 288 (333)
Q Consensus 218 ~~~i~-~~~~d~~~l-p~---~~~~fD~V~~~~vl~h~-~---d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~ 288 (333)
..++. ++.+|+.+. |+ ..++||+|+++.+|||+ + +...++++++++|||||.|++.+........
T Consensus 132 ~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~------ 205 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYM------ 205 (263)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEE------
T ss_pred HhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccce------
Confidence 01233 889999773 43 25799999999999996 3 4468999999999999999999864321100
Q ss_pred HHHhhhccCCCCCHHHHHHHHHhCCCcEEEEEEeC-----------eEEEEEEeCC
Q 019957 289 LRERILQNYNYLTEEEIEDLCTSCGLTNYTSKVQQ-----------SFIMFAAQKP 333 (333)
Q Consensus 289 ~~~~~~~~~~~~t~~~l~~ll~~aGf~~v~~~~~~-----------~~~~~~a~kp 333 (333)
..........++.+++.++|+++||++++..... .+++++|+|+
T Consensus 206 -~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~~~~~~~~~~~~~~~~~~~~~~a~K~ 260 (263)
T 2a14_A 206 -VGKREFSCVALEKGEVEQAVLDAGFDIEQLLHSPQSYSVTNAANNGVCCIVARKK 260 (263)
T ss_dssp -ETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEECCCCCTTTCCCCCEEEEEEEEC
T ss_pred -eCCeEeeccccCHHHHHHHHHHCCCEEEEEeecccccccccCCCCceEEEEEEec
Confidence 0000112346799999999999999998865422 5667788875
No 54
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.84 E-value=1.2e-20 Score=164.88 Aligned_cols=145 Identities=12% Similarity=0.143 Sum_probs=120.0
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEecc
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 245 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~ 245 (333)
++.+|||||||+|.++..+++.+ ..+++|+|+|+.+++.+++++...+ ..++.++.+|+..+++.+++||+|++..
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 154 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEG---KRVRNYFCCGLQDFTPEPDSYDVIWIQW 154 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGG---GGEEEEEECCGGGCCCCSSCEEEEEEES
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcC---CceEEEEEcChhhcCCCCCCEEEEEEcc
Confidence 47899999999999999988876 5599999999999999999877653 3468999999999888888999999999
Q ss_pred ccccCCChH--HHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCCcEEEEEEe
Q 019957 246 ALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSKVQ 322 (333)
Q Consensus 246 vl~h~~d~~--~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf~~v~~~~~ 322 (333)
+++|++++. .+++++.++|||||++++.++.... ...+. ...+...++.+++.++++++||++++....
T Consensus 155 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~--~~~~~------~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 225 (241)
T 2ex4_A 155 VIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQE--GVILD------DVDSSVCRDLDVVRRIICSAGLSLLAEERQ 225 (241)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSS--SEEEE------TTTTEEEEBHHHHHHHHHHTTCCEEEEEEC
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCC--cceec------ccCCcccCCHHHHHHHHHHcCCeEEEeeec
Confidence 999999865 8999999999999999999876542 11100 012233458999999999999999987543
No 55
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.84 E-value=5.7e-20 Score=167.26 Aligned_cols=160 Identities=15% Similarity=0.182 Sum_probs=126.0
Q ss_pred HHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCC
Q 019957 155 FKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA 234 (333)
Q Consensus 155 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~ 234 (333)
.+.+.+.+...++.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.++++....++ ..++.++.+|+.+++
T Consensus 79 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~-- 153 (318)
T 2fk8_A 79 VDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDT--NRSRQVLLQGWEDFA-- 153 (318)
T ss_dssp HHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCC--SSCEEEEESCGGGCC--
T ss_pred HHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCC--CCceEEEECChHHCC--
Confidence 3455555666678899999999999999999873 23999999999999999999887764 467999999998875
Q ss_pred CCCcceEEeccccccC--CChHHHHHHHHHhccCCcEEEEEEecccCCCc------ch------hhHHHHHhhhccCCCC
Q 019957 235 SGFVDAVHAGAALHCW--PSPSNAVAEISRILRSGGVFVGTTFLRYTSST------SL------TGRVLRERILQNYNYL 300 (333)
Q Consensus 235 ~~~fD~V~~~~vl~h~--~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~------~~------~~~~~~~~~~~~~~~~ 300 (333)
++||+|++..+++|+ +++..+++++.++|||||++++.++....... +. ...++.........+.
T Consensus 154 -~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (318)
T 2fk8_A 154 -EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLP 232 (318)
T ss_dssp -CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCC
T ss_pred -CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCC
Confidence 689999999999999 67889999999999999999999987643111 00 0011111111234567
Q ss_pred CHHHHHHHHHhCCCcEEEEE
Q 019957 301 TEEEIEDLCTSCGLTNYTSK 320 (333)
Q Consensus 301 t~~~l~~ll~~aGf~~v~~~ 320 (333)
+.+++.++++++||++++..
T Consensus 233 s~~~~~~~l~~aGf~~~~~~ 252 (318)
T 2fk8_A 233 STEMMVEHGEKAGFTVPEPL 252 (318)
T ss_dssp CHHHHHHHHHHTTCBCCCCE
T ss_pred CHHHHHHHHHhCCCEEEEEE
Confidence 99999999999999987743
No 56
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.84 E-value=1.1e-20 Score=162.80 Aligned_cols=166 Identities=15% Similarity=0.153 Sum_probs=124.6
Q ss_pred HHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC---C
Q 019957 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL---P 232 (333)
Q Consensus 156 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l---p 232 (333)
..+...+...++.+|||||||+|.++..+++.+. +++|+|+|+.+++.++++ .++.+..+|+.++ +
T Consensus 42 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~---------~~~~~~~~~~~~~~~~~ 110 (227)
T 3e8s_A 42 QAILLAILGRQPERVLDLGCGEGWLLRALADRGI--EAVGVDGDRTLVDAARAA---------GAGEVHLASYAQLAEAK 110 (227)
T ss_dssp HHHHHHHHHTCCSEEEEETCTTCHHHHHHHTTTC--EEEEEESCHHHHHHHHHT---------CSSCEEECCHHHHHTTC
T ss_pred HHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHCCC--EEEEEcCCHHHHHHHHHh---------cccccchhhHHhhcccc
Confidence 3455555556678999999999999999998865 999999999999999984 4567888888665 4
Q ss_pred CC-CCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHH-----HHH----hhhccCCCCCH
Q 019957 233 FA-SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRV-----LRE----RILQNYNYLTE 302 (333)
Q Consensus 233 ~~-~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~-----~~~----~~~~~~~~~t~ 302 (333)
+. +++||+|++..+++ ..++..+++++.++|||||++++.+++........+... +.. ....+.++++.
T Consensus 111 ~~~~~~fD~v~~~~~l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (227)
T 3e8s_A 111 VPVGKDYDLICANFALL-HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTL 189 (227)
T ss_dssp SCCCCCEEEEEEESCCC-SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCH
T ss_pred cccCCCccEEEECchhh-hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecH
Confidence 44 44599999999999 889999999999999999999999987643221100000 110 01234566799
Q ss_pred HHHHHHHHhCCCcEEEEEEe-------CeEEEEEEeCC
Q 019957 303 EEIEDLCTSCGLTNYTSKVQ-------QSFIMFAAQKP 333 (333)
Q Consensus 303 ~~l~~ll~~aGf~~v~~~~~-------~~~~~~~a~kp 333 (333)
+++.++|+++||++++.... ..-.+++++||
T Consensus 190 ~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~va~k~ 227 (227)
T 3e8s_A 190 ASWLNALDMAGLRLVSLQEPQHPQSAVPQSLLMVAERH 227 (227)
T ss_dssp HHHHHHHHHTTEEEEEEECCCCTTCSSCSCEEEEEEEC
T ss_pred HHHHHHHHHcCCeEEEEecCCCCCCCCceeEEEEeecC
Confidence 99999999999999986431 11356667775
No 57
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.84 E-value=3.9e-20 Score=166.94 Aligned_cols=166 Identities=14% Similarity=0.176 Sum_probs=123.4
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC
Q 019957 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (333)
Q Consensus 152 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (333)
......+.+.+... +.+|||||||+|.++..+++.+. +|+|+|+|+.+++.++++....++....++.++++|+.++
T Consensus 69 ~~~~~~~~~~~~~~-~~~vLDlGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~ 145 (299)
T 3g2m_A 69 TSEAREFATRTGPV-SGPVLELAAGMGRLTFPFLDLGW--EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAF 145 (299)
T ss_dssp HHHHHHHHHHHCCC-CSCEEEETCTTTTTHHHHHTTTC--CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBC
T ss_pred cHHHHHHHHhhCCC-CCcEEEEeccCCHHHHHHHHcCC--eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcC
Confidence 33445566666544 34999999999999999999864 8999999999999999998775310015899999999999
Q ss_pred CCCCCCcceEEec-cccccCCC--hHHHHHHHHHhccCCcEEEEEEecccCCCcchhh--HHHH----------------
Q 019957 232 PFASGFVDAVHAG-AALHCWPS--PSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTG--RVLR---------------- 290 (333)
Q Consensus 232 p~~~~~fD~V~~~-~vl~h~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~--~~~~---------------- 290 (333)
++ +++||+|++. .+++|++. ...+|+++.++|||||+|++.+++.......... ..+.
T Consensus 146 ~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 224 (299)
T 3g2m_A 146 AL-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPA 224 (299)
T ss_dssp CC-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC-------------CCEEEEEE
T ss_pred Cc-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEecc
Confidence 87 6899988865 66666653 4789999999999999999999876421000000 0000
Q ss_pred ------------------HhhhccCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019957 291 ------------------ERILQNYNYLTEEEIEDLCTSCGLTNYTSKV 321 (333)
Q Consensus 291 ------------------~~~~~~~~~~t~~~l~~ll~~aGf~~v~~~~ 321 (333)
.....+.++|+.+++.++|+++||++++...
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~ 273 (299)
T 3g2m_A 225 EEIQEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTP 273 (299)
T ss_dssp EEEEEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEE
T ss_pred ccEEEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEe
Confidence 0011345578999999999999999998754
No 58
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.83 E-value=1.1e-20 Score=164.47 Aligned_cols=158 Identities=20% Similarity=0.209 Sum_probs=121.1
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEe-
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA- 243 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~- 243 (333)
.++.+|||+|||+|.++..+++.++ +++|+|+|+.+++.++++ ..++.++.+|+.++++ +++||+|++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~-~~~~D~v~~~ 107 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKR--------LPDATLHQGDMRDFRL-GRKFSAVVSM 107 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHH--------CTTCEEEECCTTTCCC-SSCEEEEEEC
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHh--------CCCCEEEECCHHHccc-CCCCcEEEEc
Confidence 4567999999999999999999876 999999999999999986 4568999999998887 679999995
Q ss_pred ccccccCCCh---HHHHHHHHHhccCCcEEEEEEecccCCCcchhh-----------------------------HHH-H
Q 019957 244 GAALHCWPSP---SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTG-----------------------------RVL-R 290 (333)
Q Consensus 244 ~~vl~h~~d~---~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~-----------------------------~~~-~ 290 (333)
..+++|+.++ ..+++++.++|||||.+++.++.......+... ..+ .
T Consensus 108 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (239)
T 3bxo_A 108 FSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFPETFADGWVSADVVRRDGRTVARVSHSVREGNATRMEVHFTVA 187 (239)
T ss_dssp TTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTCEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCcccccccceEeeEEecCCceEEEEEEEecCCCEEEEEEEEEEe
Confidence 5599999654 688999999999999999987655322110000 000 0
Q ss_pred --H------hhhccCCCCCHHHHHHHHHhCCCcEEEEEEe-CeEEEEEEeCC
Q 019957 291 --E------RILQNYNYLTEEEIEDLCTSCGLTNYTSKVQ-QSFIMFAAQKP 333 (333)
Q Consensus 291 --~------~~~~~~~~~t~~~l~~ll~~aGf~~v~~~~~-~~~~~~~a~kp 333 (333)
. ....+.++++.++++.+|+++||+++..... ....+++++||
T Consensus 188 ~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGF~v~~~~~~~~~~~~~va~K~ 239 (239)
T 3bxo_A 188 DPGKGVRHFSDVHLITLFHQAEYEAAFTAAGLRVEYLEGGPSGRGLFVGVPA 239 (239)
T ss_dssp ETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEEC
T ss_pred cCCCcceEEEEEEEeeecCHHHHHHHHHHCCCEEEEeEcCCCCceEEEEecC
Confidence 0 0012446899999999999999977664332 34578888886
No 59
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.83 E-value=7.3e-20 Score=156.48 Aligned_cols=134 Identities=25% Similarity=0.301 Sum_probs=109.4
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEecc
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 245 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~ 245 (333)
++.+|||||||+|.++..+ + ..+++|+|+|+.+++.++++. .++.++.+|+.++++++++||+|++..
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~-~~~v~~vD~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~~~~~fD~v~~~~ 103 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---P-YPQKVGVEPSEAMLAVGRRRA--------PEATWVRAWGEALPFPGESFDVVLLFT 103 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---C-CSEEEEECCCHHHHHHHHHHC--------TTSEEECCCTTSCCSCSSCEEEEEEES
T ss_pred CCCeEEEECCCCCHhHHhC---C-CCeEEEEeCCHHHHHHHHHhC--------CCcEEEEcccccCCCCCCcEEEEEEcC
Confidence 6789999999999999887 2 238999999999999999863 478899999999998889999999999
Q ss_pred ccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHH--hhhccCCCCCHHHHHHHHHhCC
Q 019957 246 ALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRE--RILQNYNYLTEEEIEDLCTSCG 313 (333)
Q Consensus 246 vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~t~~~l~~ll~~aG 313 (333)
+++|++++..+++++.++|||||.+++.+++............... ....+.++++.++++++++ |
T Consensus 104 ~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 104 TLEFVEDVERVLLEARRVLRPGGALVVGVLEALSPWAALYRRLGEKGVLPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp CTTTCSCHHHHHHHHHHHEEEEEEEEEEEECTTSHHHHHHHHHHHTTCTTGGGCCCCCHHHHHHHHC--S
T ss_pred hhhhcCCHHHHHHHHHHHcCCCCEEEEEecCCcCcHHHHHHHHhhccCccccccccCCHHHHHHHhc--C
Confidence 9999999999999999999999999999987643211111110011 1225678899999999998 7
No 60
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.83 E-value=2.1e-19 Score=164.62 Aligned_cols=174 Identities=13% Similarity=0.174 Sum_probs=134.2
Q ss_pred HHHHHhhcc--cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCC
Q 019957 156 KMAQEYFKS--AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (333)
Q Consensus 156 ~~~~~~l~~--~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~ 233 (333)
..+.+.+.. .++.+|||||||+|.++..+.+..+..+++++|++ .+++.+++++...++ ..++.++.+|+.+.++
T Consensus 153 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~ 229 (335)
T 2r3s_A 153 QLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGV--ASRYHTIAGSAFEVDY 229 (335)
T ss_dssp HHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTC--GGGEEEEESCTTTSCC
T ss_pred HHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCC--CcceEEEecccccCCC
Confidence 344455554 56789999999999999999999877899999999 999999999887664 4579999999988776
Q ss_pred CCCCcceEEeccccccCCCh--HHHHHHHHHhccCCcEEEEEEecccCC-CcchhhHHHHH---hhhccCCCCCHHHHHH
Q 019957 234 ASGFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYTS-STSLTGRVLRE---RILQNYNYLTEEEIED 307 (333)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~t~~~l~~ 307 (333)
++ .||+|++.+++||++++ ..+|+++.++|||||++++.++..... ..+.....+.. ....+...++.+++.+
T Consensus 230 ~~-~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ 308 (335)
T 2r3s_A 230 GN-DYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYES 308 (335)
T ss_dssp CS-CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHH
T ss_pred CC-CCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHH
Confidence 54 49999999999999766 689999999999999999998876432 22221211111 1112567889999999
Q ss_pred HHHhCCCcEEEEEEe-CeEEEEEEeCC
Q 019957 308 LCTSCGLTNYTSKVQ-QSFIMFAAQKP 333 (333)
Q Consensus 308 ll~~aGf~~v~~~~~-~~~~~~~a~kp 333 (333)
+++++||+++++... +.+.++.+++|
T Consensus 309 ll~~aGf~~~~~~~~~~~~~~i~~~~~ 335 (335)
T 2r3s_A 309 MFSNAGFSHSQLHSLPTTQQQVIVAYK 335 (335)
T ss_dssp HHHHTTCSEEEEECCTTSSSEEEEEEC
T ss_pred HHHHCCCCeeeEEECCCCceeEEEecC
Confidence 999999999986543 33445555544
No 61
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.83 E-value=2.9e-19 Score=166.24 Aligned_cols=171 Identities=15% Similarity=0.181 Sum_probs=128.2
Q ss_pred HHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCC
Q 019957 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG 236 (333)
Q Consensus 157 ~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~ 236 (333)
.+.+.+...++.+|||||||+|.++..+.+.++..+++++|+ +.+++.+++++...++ ..++.++.+|+.+ +++.
T Consensus 173 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~-~~~~- 247 (374)
T 1qzz_A 173 APADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGL--ADRVTVAEGDFFK-PLPV- 247 (374)
T ss_dssp HHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC--TTTEEEEECCTTS-CCSC-
T ss_pred HHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCC--CCceEEEeCCCCC-cCCC-
Confidence 344455555678999999999999999999988789999999 9999999999887764 4589999999965 3333
Q ss_pred CcceEEeccccccCCChH--HHHHHHHHhccCCcEEEEEEe--cccCCCcchhhHHHHHh--hhccCCCCCHHHHHHHHH
Q 019957 237 FVDAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTF--LRYTSSTSLTGRVLRER--ILQNYNYLTEEEIEDLCT 310 (333)
Q Consensus 237 ~fD~V~~~~vl~h~~d~~--~~l~~~~r~LkpgG~l~i~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~t~~~l~~ll~ 310 (333)
.||+|++..++||++++. .+|+++.++|||||++++.++ ..+....+.....+... .......++.++|.++++
T Consensus 248 ~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 327 (374)
T 1qzz_A 248 TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAG 327 (374)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHH
T ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHH
Confidence 499999999999999885 899999999999999999887 43221111211111111 112356789999999999
Q ss_pred hCCCcEEEEEEeCe-E-----EEEEEeC
Q 019957 311 SCGLTNYTSKVQQS-F-----IMFAAQK 332 (333)
Q Consensus 311 ~aGf~~v~~~~~~~-~-----~~~~a~k 332 (333)
++||+++++...+. + .++.++|
T Consensus 328 ~aGf~~~~~~~~~~~~~~~~~~~i~~~~ 355 (374)
T 1qzz_A 328 SAGLALASERTSGSTTLPFDFSILEFTA 355 (374)
T ss_dssp TTTEEEEEEEEECCSSCSSCEEEEEEEE
T ss_pred HCCCceEEEEECCCCcccCCcEEEEEEE
Confidence 99999988755433 2 4555654
No 62
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.83 E-value=3.3e-19 Score=165.01 Aligned_cols=172 Identities=17% Similarity=0.231 Sum_probs=132.0
Q ss_pred HHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCC
Q 019957 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG 236 (333)
Q Consensus 157 ~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~ 236 (333)
.+.+.+...++.+|||||||+|.++..+++.++..+++++|+ +.+++.+++++...++ ..++.++.+|+.+ +++.
T Consensus 174 ~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~-~~~~- 248 (360)
T 1tw3_A 174 APAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGL--SDRVDVVEGDFFE-PLPR- 248 (360)
T ss_dssp HHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTC--TTTEEEEECCTTS-CCSS-
T ss_pred HHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCC--CCceEEEeCCCCC-CCCC-
Confidence 344445555678999999999999999999988889999999 9999999999887764 4589999999875 3333
Q ss_pred CcceEEeccccccCCCh--HHHHHHHHHhccCCcEEEEEEec-ccCCCcchhhHHHHHh--hhccCCCCCHHHHHHHHHh
Q 019957 237 FVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFL-RYTSSTSLTGRVLRER--ILQNYNYLTEEEIEDLCTS 311 (333)
Q Consensus 237 ~fD~V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~t~~~l~~ll~~ 311 (333)
.||+|++..++||++++ ..+++++.++|||||++++.++. .+..........+... ...+...++.++|.+++++
T Consensus 249 ~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~ 328 (360)
T 1tw3_A 249 KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAAS 328 (360)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHH
T ss_pred CccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHH
Confidence 49999999999999987 48999999999999999999876 3322111212211111 1124567899999999999
Q ss_pred CCCcEEEEEEeCe------EEEEEEeCC
Q 019957 312 CGLTNYTSKVQQS------FIMFAAQKP 333 (333)
Q Consensus 312 aGf~~v~~~~~~~------~~~~~a~kp 333 (333)
+||++++...... +.++.++||
T Consensus 329 aGf~~~~~~~~~~~~~~~~~~~i~~~~~ 356 (360)
T 1tw3_A 329 AGLVVEEVRQLPSPTIPYDLSLLVLAPA 356 (360)
T ss_dssp TTEEEEEEEEEECSSSSCEEEEEEEEEC
T ss_pred CCCeEEEEEeCCCCcccCccEEEEEEeC
Confidence 9999988755433 567777764
No 63
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.82 E-value=2e-19 Score=161.66 Aligned_cols=124 Identities=21% Similarity=0.208 Sum_probs=105.0
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcC-CCCCeEEEEccCCC
Q 019957 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI-LTSNLALVRADVCR 230 (333)
Q Consensus 152 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~-~~~~i~~~~~d~~~ 230 (333)
....+.+...+...++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.++++....+.. ...++.+..+|+..
T Consensus 43 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~ 120 (293)
T 3thr_A 43 AEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGF--SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLT 120 (293)
T ss_dssp HHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGG
T ss_pred HHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhh
Confidence 44556677777767788999999999999999999876 9999999999999999876432210 02468899999988
Q ss_pred CC---CCCCCcceEEec-cccccCCC-------hHHHHHHHHHhccCCcEEEEEEecc
Q 019957 231 LP---FASGFVDAVHAG-AALHCWPS-------PSNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 231 lp---~~~~~fD~V~~~-~vl~h~~d-------~~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
++ +.+++||+|++. .+++|+++ +..+++++.++|||||++++.+++.
T Consensus 121 ~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (293)
T 3thr_A 121 LDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNY 178 (293)
T ss_dssp HHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred CccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCCH
Confidence 87 778899999998 89999999 8999999999999999999998764
No 64
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.82 E-value=3.3e-19 Score=156.84 Aligned_cols=152 Identities=18% Similarity=0.191 Sum_probs=114.9
Q ss_pred HHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHh----------cCc----CCCCC
Q 019957 155 FKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQ----------DNT----ILTSN 220 (333)
Q Consensus 155 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~----------~~~----~~~~~ 220 (333)
.+.+...+...++.+|||+|||+|..+..|++.|. +|+|+|+|+.+++.|+++... .+. ....+
T Consensus 57 ~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~G~--~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (252)
T 2gb4_A 57 KKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADRGH--TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGS 134 (252)
T ss_dssp HHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHTTC--EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSS
T ss_pred HHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHCCC--eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCc
Confidence 34444433334678999999999999999999876 999999999999999876531 000 00357
Q ss_pred eEEEEccCCCCCCCC-CCcceEEeccccccCCCh--HHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccC
Q 019957 221 LALVRADVCRLPFAS-GFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNY 297 (333)
Q Consensus 221 i~~~~~d~~~lp~~~-~~fD~V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (333)
+.++++|+.++++.+ ++||+|++..+++|++.+ ..+++++.++|||||++++.+....... .....
T Consensus 135 i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~-----------~~g~~ 203 (252)
T 2gb4_A 135 ISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTK-----------HAGPP 203 (252)
T ss_dssp EEEEESCTTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTS-----------CCCSS
T ss_pred eEEEECccccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCcc-----------CCCCC
Confidence 999999999998764 899999999999999754 5789999999999999987665432110 01122
Q ss_pred CCCCHHHHHHHHHhCCCcEEEEE
Q 019957 298 NYLTEEEIEDLCTSCGLTNYTSK 320 (333)
Q Consensus 298 ~~~t~~~l~~ll~~aGf~~v~~~ 320 (333)
..++++++..+++. +|+++...
T Consensus 204 ~~~~~~el~~~l~~-~f~v~~~~ 225 (252)
T 2gb4_A 204 FYVPSAELKRLFGT-KCSMQCLE 225 (252)
T ss_dssp CCCCHHHHHHHHTT-TEEEEEEE
T ss_pred CCCCHHHHHHHhhC-CeEEEEEe
Confidence 34799999999987 59887654
No 65
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.82 E-value=5.6e-19 Score=161.82 Aligned_cols=171 Identities=16% Similarity=0.082 Sum_probs=132.3
Q ss_pred HHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCC
Q 019957 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (333)
Q Consensus 156 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (333)
..+.+.+...+ .+|||||||+|.++..+++.++..+++++|+ +.+++.+++++...++ ..++.++.+|+.+ +++
T Consensus 158 ~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~-~~~- 231 (334)
T 2ip2_A 158 HEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLA--GERVSLVGGDMLQ-EVP- 231 (334)
T ss_dssp HHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHH--TTSEEEEESCTTT-CCC-
T ss_pred HHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCC--CCcEEEecCCCCC-CCC-
Confidence 44444444444 7999999999999999999988889999999 9999999998776553 4689999999977 544
Q ss_pred CCcceEEeccccccCCChH--HHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHh--hhccCCCCCHHHHHHHHHh
Q 019957 236 GFVDAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRER--ILQNYNYLTEEEIEDLCTS 311 (333)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~--~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~t~~~l~~ll~~ 311 (333)
++||+|++..++||++++. .++++++++|||||++++.+...+....+.....+.-. .......++.++|.+++++
T Consensus 232 ~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~ 311 (334)
T 2ip2_A 232 SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGR 311 (334)
T ss_dssp SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHH
T ss_pred CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHH
Confidence 6799999999999998876 89999999999999999998775433223322221111 1123456799999999999
Q ss_pred CCCcEEEEEEe-CeEEEEEEeC
Q 019957 312 CGLTNYTSKVQ-QSFIMFAAQK 332 (333)
Q Consensus 312 aGf~~v~~~~~-~~~~~~~a~k 332 (333)
+||+++++... +.+.++.++|
T Consensus 312 aGf~~~~~~~~~~~~~~i~~~~ 333 (334)
T 2ip2_A 312 GGFAVERIVDLPMETRMIVAAR 333 (334)
T ss_dssp TTEEEEEEEEETTTEEEEEEEE
T ss_pred CCCceeEEEECCCCCEEEEEEe
Confidence 99999887654 3456677765
No 66
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.82 E-value=4e-20 Score=163.47 Aligned_cols=161 Identities=17% Similarity=0.274 Sum_probs=122.7
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcC--------------C------------C
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI--------------L------------T 218 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~--------------~------------~ 218 (333)
.++.+|||||||+|.++..++..+. .+|+|+|+|+.+++.+++++...+.. . .
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 4567899999999999998888764 58999999999999999887553200 0 0
Q ss_pred CCe-EEEEccCCCCC-CCC---CCcceEEeccccc----cCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHH
Q 019957 219 SNL-ALVRADVCRLP-FAS---GFVDAVHAGAALH----CWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVL 289 (333)
Q Consensus 219 ~~i-~~~~~d~~~lp-~~~---~~fD~V~~~~vl~----h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~ 289 (333)
.++ .++.+|+.+.+ +.+ ++||+|++..+++ |+.++..+++++.++|||||+|++.+....... ..
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~-~~----- 207 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYY-MI----- 207 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEE-EE-----
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceE-Ec-----
Confidence 027 89999998764 345 7999999999999 666788999999999999999999986543100 00
Q ss_pred HHhhhccCCCCCHHHHHHHHHhCCCcEEEEEEeC-----------eEEEEEEeCC
Q 019957 290 RERILQNYNYLTEEEIEDLCTSCGLTNYTSKVQQ-----------SFIMFAAQKP 333 (333)
Q Consensus 290 ~~~~~~~~~~~t~~~l~~ll~~aGf~~v~~~~~~-----------~~~~~~a~kp 333 (333)
.........++.+++.++++++||++++..... .+++++++|+
T Consensus 208 -~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~ 261 (265)
T 2i62_A 208 -GEQKFSSLPLGWETVRDAVEEAGYTIEQFEVISQNYSSTTSNNEGLFSLVGRKP 261 (265)
T ss_dssp -TTEEEECCCCCHHHHHHHHHHTTCEEEEEEEECCCCCTTTBCCCCEEEEEEECC
T ss_pred -CCccccccccCHHHHHHHHHHCCCEEEEEEEecccCCccccccceEEEEEeccc
Confidence 011123456899999999999999998875433 4677788885
No 67
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.82 E-value=3.7e-19 Score=155.19 Aligned_cols=170 Identities=18% Similarity=0.227 Sum_probs=127.0
Q ss_pred HHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCC
Q 019957 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (333)
Q Consensus 154 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~ 233 (333)
..+.+...+.+ +.+|||+|||+|.++..+++. .+++|+|+|+.+++.++++....+ .++.++.+|+.++++
T Consensus 23 ~~~~~~~~~~~--~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~ 93 (243)
T 3d2l_A 23 WVAWVLEQVEP--GKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMETN----RHVDFWVQDMRELEL 93 (243)
T ss_dssp HHHHHHHHSCT--TCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHTT----CCCEEEECCGGGCCC
T ss_pred HHHHHHHHcCC--CCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhcC----CceEEEEcChhhcCC
Confidence 34555555543 579999999999999999887 499999999999999999887643 478999999998876
Q ss_pred CCCCcceEEecc-ccccCC---ChHHHHHHHHHhccCCcEEEEEEecccCC--C---cc---------hh-hH-------
Q 019957 234 ASGFVDAVHAGA-ALHCWP---SPSNAVAEISRILRSGGVFVGTTFLRYTS--S---TS---------LT-GR------- 287 (333)
Q Consensus 234 ~~~~fD~V~~~~-vl~h~~---d~~~~l~~~~r~LkpgG~l~i~~~~~~~~--~---~~---------~~-~~------- 287 (333)
. ++||+|++.. +++|+. ++..+++++.++|||||.+++..++.... . .. .. ..
T Consensus 94 ~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (243)
T 3d2l_A 94 P-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHSPYKMETLFNGKTYATHAEQSSYIWFADPGEEPL 172 (243)
T ss_dssp S-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHHTTTSSEEEEEECSSEEEEEEEEECSSTT
T ss_pred C-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCCHHHHHHhcCCcceeEECCCcEEEEEeecCcccc
Confidence 5 7899999986 999994 45688999999999999999977653200 0 00 00 00
Q ss_pred -------HH---HH------hhhccCCCCCHHHHHHHHHhCCCcEEEEEEe---------CeEEEEEEeCC
Q 019957 288 -------VL---RE------RILQNYNYLTEEEIEDLCTSCGLTNYTSKVQ---------QSFIMFAAQKP 333 (333)
Q Consensus 288 -------~~---~~------~~~~~~~~~t~~~l~~ll~~aGf~~v~~~~~---------~~~~~~~a~kp 333 (333)
.+ .. ....+.++++.+++.++|+++||++++.... ....+++++||
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~va~K~ 243 (243)
T 3d2l_A 173 SVVHELTFFIEGEDGRYDRVDETHHQRTYPPEQYITWLREAGFRVCAVTGDFKSDAPTETAERIFFVAEKI 243 (243)
T ss_dssp EEEEEEEEEEECTTSCEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEETTSSSCCCTTCSEEEEEEEEC
T ss_pred EEEEEEEEEEEcCCCceEEEEEEEeEecCCHHHHHHHHHHCCCeEEEEecCcccCCCCCCceEEEEEEEeC
Confidence 00 00 0012446789999999999999999887542 24478888886
No 68
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.82 E-value=5e-20 Score=162.46 Aligned_cols=114 Identities=27% Similarity=0.314 Sum_probs=98.7
Q ss_pred cHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC
Q 019957 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (333)
Q Consensus 151 ~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (333)
+.+..+.+.+... .+.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|++ .+++.++++|+++
T Consensus 26 p~~l~~~l~~~~~--~~~~vLDvGcGtG~~~~~l~~~~~--~v~gvD~s~~ml~~a~~---------~~~v~~~~~~~e~ 92 (257)
T 4hg2_A 26 PRALFRWLGEVAP--ARGDALDCGCGSGQASLGLAEFFE--RVHAVDPGEAQIRQALR---------HPRVTYAVAPAED 92 (257)
T ss_dssp CHHHHHHHHHHSS--CSSEEEEESCTTTTTHHHHHTTCS--EEEEEESCHHHHHTCCC---------CTTEEEEECCTTC
T ss_pred HHHHHHHHHHhcC--CCCCEEEEcCCCCHHHHHHHHhCC--EEEEEeCcHHhhhhhhh---------cCCceeehhhhhh
Confidence 4555666666643 356899999999999999999876 99999999999988764 5789999999999
Q ss_pred CCCCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEeccc
Q 019957 231 LPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRY 278 (333)
Q Consensus 231 lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~ 278 (333)
+|+++++||+|++..++||+ ++.+++++++|+|||||+|++.++...
T Consensus 93 ~~~~~~sfD~v~~~~~~h~~-~~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 93 TGLPPASVDVAIAAQAMHWF-DLDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp CCCCSSCEEEEEECSCCTTC-CHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred hcccCCcccEEEEeeehhHh-hHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 99999999999999999776 688999999999999999999887643
No 69
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.82 E-value=9e-20 Score=157.46 Aligned_cols=161 Identities=21% Similarity=0.289 Sum_probs=120.1
Q ss_pred HHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCC
Q 019957 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (333)
Q Consensus 156 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (333)
+.+...+. ++.+|||+|||+|.++..+++.++ +++|+|+|+.+++.++++.... ..++.++.+|+.++++++
T Consensus 30 ~~l~~~~~--~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~~~~ 101 (227)
T 1ve3_A 30 PLLMKYMK--KRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSR----ESNVEFIVGDARKLSFED 101 (227)
T ss_dssp HHHHHSCC--SCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCCEEEECCTTSCCSCT
T ss_pred HHHHHhcC--CCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhc----CCCceEEECchhcCCCCC
Confidence 34444443 367999999999999999999887 9999999999999999987764 357999999999988878
Q ss_pred CCcceEEeccc--cccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhh------HHHHHhh-h------------
Q 019957 236 GFVDAVHAGAA--LHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTG------RVLRERI-L------------ 294 (333)
Q Consensus 236 ~~fD~V~~~~v--l~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~------~~~~~~~-~------------ 294 (333)
++||+|++..+ ++|..++..+++++.++|||||++++.+++.......... ..+.... +
T Consensus 102 ~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (227)
T 1ve3_A 102 KTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTDLRELLPRLKESLVVGQKYWISKVIPDQEERTVVIEFK 181 (227)
T ss_dssp TCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHGGGCCC---------CCEEEEETTTTEEEEEC-
T ss_pred CcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecChHHHHHHHHhhhhcccceeecccccCccccEEEEEec
Confidence 89999999999 5566677899999999999999999998864311111000 0000000 0
Q ss_pred -------ccCCCCCHHHHHHHHHhCCCcEEEEEEeCeE
Q 019957 295 -------QNYNYLTEEEIEDLCTSCGLTNYTSKVQQSF 325 (333)
Q Consensus 295 -------~~~~~~t~~~l~~ll~~aGf~~v~~~~~~~~ 325 (333)
.+...++ .++.++|+++||+.++....+.+
T Consensus 182 ~~~~~~~~~~~~w~-~~~~~~l~~~GF~~v~~~~~~~~ 218 (227)
T 1ve3_A 182 SEQDSFRVRFNVWG-KTGVELLAKLYFTKEAEEKVGNY 218 (227)
T ss_dssp ----CCEEEEECCC-HHHHHHHHTTTEEEEEEEEETTT
T ss_pred cchhhheeehhhhc-hHHHHHHHHHhhhHHHHHHhCCc
Confidence 0112233 48899999999999997766644
No 70
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.81 E-value=2.2e-19 Score=155.02 Aligned_cols=150 Identities=15% Similarity=0.197 Sum_probs=118.5
Q ss_pred HHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC--CCCC
Q 019957 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR--LPFA 234 (333)
Q Consensus 157 ~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~--lp~~ 234 (333)
.+.+.+. .++.+|||+|||+|.++..+.+.+ .+++|+|+++.+++.++++ ...++.+|+.. .+++
T Consensus 24 ~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~--~~~~~~D~~~~~~~~~~~~----------~~~~~~~d~~~~~~~~~ 90 (230)
T 3cc8_A 24 NLLKHIK-KEWKEVLDIGCSSGALGAAIKENG--TRVSGIEAFPEAAEQAKEK----------LDHVVLGDIETMDMPYE 90 (230)
T ss_dssp HHHTTCC-TTCSEEEEETCTTSHHHHHHHTTT--CEEEEEESSHHHHHHHHTT----------SSEEEESCTTTCCCCSC
T ss_pred HHHHHhc-cCCCcEEEeCCCCCHHHHHHHhcC--CeEEEEeCCHHHHHHHHHh----------CCcEEEcchhhcCCCCC
Confidence 3444444 467899999999999999999884 5999999999999988863 23688899976 5677
Q ss_pred CCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHH---------hhhccCCCCCHHHH
Q 019957 235 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRE---------RILQNYNYLTEEEI 305 (333)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~t~~~l 305 (333)
+++||+|++..+++|++++..+++++.++|||||.+++.+++.... ......... ....|.++++.+++
T Consensus 91 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (230)
T 3cc8_A 91 EEQFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPNVSHI--SVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEM 168 (230)
T ss_dssp TTCEEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEECTTSH--HHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHH
T ss_pred CCccCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCCcchH--HHHHHHhcCCceeccCCCCCcceEEEecHHHH
Confidence 8899999999999999999999999999999999999999875311 110111111 01245678999999
Q ss_pred HHHHHhCCCcEEEEEE
Q 019957 306 EDLCTSCGLTNYTSKV 321 (333)
Q Consensus 306 ~~ll~~aGf~~v~~~~ 321 (333)
.++++++||++++...
T Consensus 169 ~~~l~~~Gf~~~~~~~ 184 (230)
T 3cc8_A 169 LRMFLKAGYSISKVDR 184 (230)
T ss_dssp HHHHHHTTEEEEEEEE
T ss_pred HHHHHHcCCeEEEEEe
Confidence 9999999999887644
No 71
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.81 E-value=4.3e-19 Score=164.52 Aligned_cols=152 Identities=12% Similarity=0.111 Sum_probs=121.7
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC--CCCCCCcceEE
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL--PFASGFVDAVH 242 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l--p~~~~~fD~V~ 242 (333)
....+|||||||+|.++..+++.+|..+++++|+ +.+++.+++++...++ ..++.++.+|+.+. |++ ++||+|+
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~p-~~~D~v~ 253 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSG--SERIHGHGANLLDRDVPFP-TGFDAVW 253 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTT--GGGEEEEECCCCSSSCCCC-CCCSEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCc--ccceEEEEccccccCCCCC-CCcCEEE
Confidence 4567999999999999999999988889999999 9999999999887664 46899999999875 455 6899999
Q ss_pred eccccccCCChH--HHHHHHHHhccCCcEEEEEEecccCCCcchhh--HHHHH-----hhhccCCCCCHHHHHHHHHhCC
Q 019957 243 AGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRYTSSTSLTG--RVLRE-----RILQNYNYLTEEEIEDLCTSCG 313 (333)
Q Consensus 243 ~~~vl~h~~d~~--~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~t~~~l~~ll~~aG 313 (333)
+..++||++++. .+|++++++|||||+|++.++........... ..... ........++.++|+++++++|
T Consensus 254 ~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AG 333 (363)
T 3dp7_A 254 MSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAG 333 (363)
T ss_dssp EESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTT
T ss_pred EechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcC
Confidence 999999998774 78999999999999999998766432221100 00000 1113345679999999999999
Q ss_pred CcEEEEE
Q 019957 314 LTNYTSK 320 (333)
Q Consensus 314 f~~v~~~ 320 (333)
|+++++.
T Consensus 334 f~~v~~~ 340 (363)
T 3dp7_A 334 LEVEEIQ 340 (363)
T ss_dssp EEESCCC
T ss_pred CeEEEEE
Confidence 9998865
No 72
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.81 E-value=6.8e-19 Score=158.77 Aligned_cols=160 Identities=18% Similarity=0.258 Sum_probs=121.4
Q ss_pred cHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhc-CcCCCCCeEEEEccC
Q 019957 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQD-NTILTSNLALVRADV 228 (333)
Q Consensus 151 ~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~~~-~~~~~~~i~~~~~d~ 228 (333)
+....+.+..+.. .++.+|||||||+|.++..+++.. +..+|+|+|+|+.+++.+++++... +. ..++.++++|+
T Consensus 22 ~~~~~~~l~~~~~-~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~--~~~v~~~~~d~ 98 (299)
T 3g5t_A 22 PSDFYKMIDEYHD-GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDT--YKNVSFKISSS 98 (299)
T ss_dssp CHHHHHHHHHHCC-SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-C--CTTEEEEECCT
T ss_pred CHHHHHHHHHHhc-CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCC--CCceEEEEcCH
Confidence 4455566666544 467899999999999999999764 6779999999999999999998775 22 56899999999
Q ss_pred CCCCCCC------CCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccC-CCcchhhHHHHHh------hhc
Q 019957 229 CRLPFAS------GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYT-SSTSLTGRVLRER------ILQ 295 (333)
Q Consensus 229 ~~lp~~~------~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~-~~~~~~~~~~~~~------~~~ 295 (333)
.++++.+ ++||+|++..++||+ ++..+++++.++|||||.|++.+..... ...+.....+... ...
T Consensus 99 ~~~~~~~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (299)
T 3g5t_A 99 DDFKFLGADSVDKQKIDMITAVECAHWF-DFEKFQRSAYANLRKDGTIAIWGYADPIFPDYPEFDDLMIEVPYGKQGLGP 177 (299)
T ss_dssp TCCGGGCTTTTTSSCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEEEECTTCGGGTTHHHHHHHCTTTTGG
T ss_pred HhCCccccccccCCCeeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEEEecCCccccCcHHHHHHHHHhccCcccccc
Confidence 9998777 899999999999999 9999999999999999999995544321 1111112222111 111
Q ss_pred cCCCCCHHHHHHHHHhCCC
Q 019957 296 NYNYLTEEEIEDLCTSCGL 314 (333)
Q Consensus 296 ~~~~~t~~~l~~ll~~aGf 314 (333)
.+.....+.+..++++.||
T Consensus 178 ~w~~p~~~~~~~~l~~~gf 196 (299)
T 3g5t_A 178 YWEQPGRSRLRNMLKDSHL 196 (299)
T ss_dssp GSCTTHHHHHHTTTTTCCC
T ss_pred hhhchhhHHHHHhhhccCC
Confidence 2222456678999999999
No 73
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.81 E-value=7e-20 Score=155.54 Aligned_cols=138 Identities=14% Similarity=0.116 Sum_probs=112.6
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEecc
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 245 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~ 245 (333)
++ +|||||||+|.++..+++.+. +++|+|+|+.+++.++++....+ .++.++.+|+..+++++++||+|++..
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~~~ 102 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASLGY--EVTAVDQSSVGLAKAKQLAQEKG----VKITTVQSNLADFDIVADAWEGIVSIF 102 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTTTC--EEEEECSSHHHHHHHHHHHHHHT----CCEEEECCBTTTBSCCTTTCSEEEEEC
T ss_pred CC-CEEEECCCCCHhHHHHHhCCC--eEEEEECCHHHHHHHHHHHHhcC----CceEEEEcChhhcCCCcCCccEEEEEh
Confidence 35 999999999999999998864 99999999999999999887754 379999999999888888999999954
Q ss_pred ccccC--CChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCCcEEEEE
Q 019957 246 ALHCW--PSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSK 320 (333)
Q Consensus 246 vl~h~--~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf~~v~~~ 320 (333)
.|+ .++..+++++.++|||||.+++.++....... .......+..+++.+++.++++ ||+++...
T Consensus 103 --~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~~ 169 (202)
T 2kw5_A 103 --CHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQY------NTGGPKDLDLLPKLETLQSELP--SLNWLIAN 169 (202)
T ss_dssp --CCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGG------TSCCSSSGGGCCCHHHHHHHCS--SSCEEEEE
T ss_pred --hcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccC------CCCCCCcceeecCHHHHHHHhc--CceEEEEE
Confidence 444 46678999999999999999999987642110 0011124567899999999999 99988754
No 74
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.81 E-value=1.3e-18 Score=146.20 Aligned_cols=139 Identities=17% Similarity=0.175 Sum_probs=117.8
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEec
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~ 244 (333)
.++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++ ..++.++.+|+..+++++++||+|++.
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~~~~~~~~a~~~--------~~~~~~~~~d~~~~~~~~~~~D~i~~~ 114 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQGH--DVLGTDLDPILIDYAKQD--------FPEARWVVGDLSVDQISETDFDLIVSA 114 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHH--------CTTSEEEECCTTTSCCCCCCEEEEEEC
T ss_pred cCCCeEEEECCCCCHHHHHHHHCCC--cEEEEcCCHHHHHHHHHh--------CCCCcEEEcccccCCCCCCceeEEEEC
Confidence 3577999999999999999998854 999999999999999986 456899999999888878899999998
Q ss_pred -cccccCCC--hHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019957 245 -AALHCWPS--PSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSKV 321 (333)
Q Consensus 245 -~vl~h~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf~~v~~~~ 321 (333)
.+++|+.. ...+++++.++|+|||.+++..+... .++.+++..+++++||++++...
T Consensus 115 ~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~--------------------~~~~~~~~~~l~~~Gf~~~~~~~ 174 (195)
T 3cgg_A 115 GNVMGFLAEDGREPALANIHRALGADGRAVIGFGAGR--------------------GWVFGDFLEVAERVGLELENAFE 174 (195)
T ss_dssp CCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTS--------------------SCCHHHHHHHHHHHTEEEEEEES
T ss_pred CcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCC--------------------CcCHHHHHHHHHHcCCEEeeeec
Confidence 78999854 47899999999999999999875432 26889999999999999988643
Q ss_pred ---------eCeEEEEEEeCC
Q 019957 322 ---------QQSFIMFAAQKP 333 (333)
Q Consensus 322 ---------~~~~~~~~a~kp 333 (333)
...+++++++|+
T Consensus 175 ~~~~~~~~~~~~~~~~v~~k~ 195 (195)
T 3cgg_A 175 SWDLKPFVQGSEFLVAVFTKK 195 (195)
T ss_dssp STTCCBCCTTCSEEEEEEEEC
T ss_pred ccccCcCCCCCcEEEEEEecC
Confidence 245677888775
No 75
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.80 E-value=1.3e-18 Score=155.82 Aligned_cols=156 Identities=15% Similarity=0.146 Sum_probs=124.3
Q ss_pred HhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcc
Q 019957 160 EYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVD 239 (333)
Q Consensus 160 ~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD 239 (333)
+.+...++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++++...+ . ++.++.+|+..+++ +++||
T Consensus 114 ~~~~~~~~~~vLD~GcG~G~~~~~l~~~g~--~v~~vD~s~~~~~~a~~~~~~~~---~-~~~~~~~d~~~~~~-~~~fD 186 (286)
T 3m70_A 114 DAAKIISPCKVLDLGCGQGRNSLYLSLLGY--DVTSWDHNENSIAFLNETKEKEN---L-NISTALYDINAANI-QENYD 186 (286)
T ss_dssp HHHHHSCSCEEEEESCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT---C-CEEEEECCGGGCCC-CSCEE
T ss_pred HHhhccCCCcEEEECCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHHcC---C-ceEEEEeccccccc-cCCcc
Confidence 344444678999999999999999999865 99999999999999999988765 2 89999999998877 78999
Q ss_pred eEEeccccccCCCh--HHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCCcEE
Q 019957 240 AVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNY 317 (333)
Q Consensus 240 ~V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf~~v 317 (333)
+|++..+++|++++ ..+++++.++|||||.+++.......... . .......++.+++..+++. |+++
T Consensus 187 ~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~-~--------~~~~~~~~~~~~l~~~~~~--~~~~ 255 (286)
T 3m70_A 187 FIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVP-C--------PLPFSFTFAENELKEYYKD--WEFL 255 (286)
T ss_dssp EEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSC-C--------SSCCSCCBCTTHHHHHTTT--SEEE
T ss_pred EEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCC-C--------CCCccccCCHHHHHHHhcC--CEEE
Confidence 99999999999665 48999999999999998887765432111 0 1133567889999999966 8776
Q ss_pred EEEE---------------eCeEEEEEEeCC
Q 019957 318 TSKV---------------QQSFIMFAAQKP 333 (333)
Q Consensus 318 ~~~~---------------~~~~~~~~a~kp 333 (333)
.... ...+..++|+||
T Consensus 256 ~~~~~~~~~~~~~~~g~~~~~~~~~l~arK~ 286 (286)
T 3m70_A 256 EYNENMGELHKTDENGNRIKMKFATMLARKK 286 (286)
T ss_dssp EEECCEEEEEEECSSCCEEEEEEEEEEEECC
T ss_pred EEEccCCeeeeccCCCCEEEEEEEEEEEecC
Confidence 6421 113677888987
No 76
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.80 E-value=2.7e-18 Score=158.57 Aligned_cols=170 Identities=14% Similarity=0.175 Sum_probs=131.7
Q ss_pred HHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCC
Q 019957 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG 236 (333)
Q Consensus 157 ~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~ 236 (333)
.+...+...+..+|||||||+|.++..+++++|..+++.+|. +.+++.++++....+ ..+++++.+|+...|.+
T Consensus 170 ~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~---~~rv~~~~gD~~~~~~~-- 243 (353)
T 4a6d_A 170 SVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE---EEQIDFQEGDFFKDPLP-- 243 (353)
T ss_dssp HHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC-----CCSEEEEESCTTTSCCC--
T ss_pred HHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc---cCceeeecCccccCCCC--
Confidence 344444445567999999999999999999999999999997 889999998876544 57899999999876644
Q ss_pred CcceEEeccccccCCChH--HHHHHHHHhccCCcEEEEEEecccC-CCcchhhHHHHHhh--hccCCCCCHHHHHHHHHh
Q 019957 237 FVDAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRYT-SSTSLTGRVLRERI--LQNYNYLTEEEIEDLCTS 311 (333)
Q Consensus 237 ~fD~V~~~~vl~h~~d~~--~~l~~~~r~LkpgG~l~i~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~t~~~l~~ll~~ 311 (333)
.+|+|++.++||+++|+. ++|+++++.|+|||++++.+...+. ...++....+.-.. .....-+|.++|++++++
T Consensus 244 ~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~ 323 (353)
T 4a6d_A 244 EADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSS 323 (353)
T ss_dssp CCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHH
T ss_pred CceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHH
Confidence 579999999999999884 7899999999999999999976543 22333222221111 122345799999999999
Q ss_pred CCCcEEEEEEeC-eEEEEEEeC
Q 019957 312 CGLTNYTSKVQQ-SFIMFAAQK 332 (333)
Q Consensus 312 aGf~~v~~~~~~-~~~~~~a~k 332 (333)
+||+++++...+ .+.+++|+|
T Consensus 324 AGf~~v~v~~~~~~~~~i~ArK 345 (353)
T 4a6d_A 324 AGFRDFQFKKTGAIYDAILARK 345 (353)
T ss_dssp HTCEEEEEECCSSSCEEEEEEC
T ss_pred CCCceEEEEEcCCceEEEEEEe
Confidence 999999976544 457788988
No 77
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.80 E-value=5.4e-19 Score=162.94 Aligned_cols=168 Identities=15% Similarity=0.114 Sum_probs=123.6
Q ss_pred HHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCC
Q 019957 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG 236 (333)
Q Consensus 157 ~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~ 236 (333)
.+.+.+...++.+|||||||+|.++..+++.++..+++++|+ +.++. +++....+. ..++.++.+|+. .+++
T Consensus 175 ~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~--~~~v~~~~~d~~-~~~p-- 246 (348)
T 3lst_A 175 ILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDV--AGRWKVVEGDFL-REVP-- 246 (348)
T ss_dssp HHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGG--TTSEEEEECCTT-TCCC--
T ss_pred HHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCC--CCCeEEEecCCC-CCCC--
Confidence 344444555677999999999999999999998889999999 44444 333332332 467999999996 3333
Q ss_pred CcceEEeccccccCCCh--HHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHH--hhhccCCCCCHHHHHHHHHhC
Q 019957 237 FVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRE--RILQNYNYLTEEEIEDLCTSC 312 (333)
Q Consensus 237 ~fD~V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~t~~~l~~ll~~a 312 (333)
+||+|++..++||++++ .++|++++++|||||+|++.+........+.....+.. ........++.++|.++++++
T Consensus 247 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~a 326 (348)
T 3lst_A 247 HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAA 326 (348)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHT
T ss_pred CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHC
Confidence 89999999999999998 69999999999999999999977654433332222211 111345578999999999999
Q ss_pred CCcEEEEEEeCeE-EEEEEeC
Q 019957 313 GLTNYTSKVQQSF-IMFAAQK 332 (333)
Q Consensus 313 Gf~~v~~~~~~~~-~~~~a~k 332 (333)
||+++++.....+ .++.++|
T Consensus 327 Gf~~~~~~~~~~~~~vie~~p 347 (348)
T 3lst_A 327 GLRLDRVVGTSSVMSIAVGVP 347 (348)
T ss_dssp TEEEEEEEECSSSCEEEEEEE
T ss_pred CCceEEEEECCCCcEEEEEEe
Confidence 9999997764443 4555543
No 78
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.80 E-value=9.3e-19 Score=157.30 Aligned_cols=154 Identities=19% Similarity=0.177 Sum_probs=119.9
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCC-CCCCcceEEe
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF-ASGFVDAVHA 243 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~-~~~~fD~V~~ 243 (333)
.++.+|||||||+|.++..+++.+ ..+++|+|+|+.+++.++++....+. ..++.++.+|+.++++ .+++||+|++
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~~fD~v~~ 139 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAG-IGEYYGVDIAEVSINDARVRARNMKR--RFKVFFRAQDSYGRHMDLGKEFDVISS 139 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHT-CSEEEEEESCHHHHHHHHHHHHTSCC--SSEEEEEESCTTTSCCCCSSCEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcCC--CccEEEEECCccccccCCCCCcCEEEE
Confidence 457899999999999999888875 45899999999999999999887653 3579999999999887 5789999999
Q ss_pred cccccc----CCChHHHHHHHHHhccCCcEEEEEEecccCCC----------------------cch-hhHHHH-----H
Q 019957 244 GAALHC----WPSPSNAVAEISRILRSGGVFVGTTFLRYTSS----------------------TSL-TGRVLR-----E 291 (333)
Q Consensus 244 ~~vl~h----~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~----------------------~~~-~~~~~~-----~ 291 (333)
..+++| ..++..+|+++.++|||||.+++.+++..... .+. .+..+. .
T Consensus 140 ~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~ 219 (298)
T 1ri5_A 140 QFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDS 219 (298)
T ss_dssp ESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTS
T ss_pred CchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEchh
Confidence 999977 45678999999999999999999998753100 000 000000 0
Q ss_pred hhhccCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019957 292 RILQNYNYLTEEEIEDLCTSCGLTNYTSKV 321 (333)
Q Consensus 292 ~~~~~~~~~t~~~l~~ll~~aGf~~v~~~~ 321 (333)
....+.++++.+++..+++++||++++...
T Consensus 220 ~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~ 249 (298)
T 1ri5_A 220 VNNCIEYFVDFTRMVDGFKRLGLSLVERKG 249 (298)
T ss_dssp CSSEEEECCCHHHHHHHHHTTTEEEEEEEE
T ss_pred hcCCcccccCHHHHHHHHHHcCCEEEEecC
Confidence 001224678999999999999999988644
No 79
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.80 E-value=1e-17 Score=142.44 Aligned_cols=137 Identities=18% Similarity=0.097 Sum_probs=115.0
Q ss_pred cHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC
Q 019957 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (333)
Q Consensus 151 ~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (333)
..+....+...+...++.+|||+|||+|.++..+++.++..+++|+|+|+.+++.+++++...+ ..++.++.+|+.+
T Consensus 25 ~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~v~~~~~d~~~ 101 (204)
T 3e05_A 25 KQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFV---ARNVTLVEAFAPE 101 (204)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHT---CTTEEEEECCTTT
T ss_pred hHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhC---CCcEEEEeCChhh
Confidence 4444466777777778889999999999999999999877899999999999999999988776 4689999999966
Q ss_pred CCCCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHH
Q 019957 231 LPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCT 310 (333)
Q Consensus 231 lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~ 310 (333)
.....++||+|++..+++ ++..+++++.++|||||++++.+.... +.+++.++++
T Consensus 102 ~~~~~~~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~~----------------------~~~~~~~~l~ 156 (204)
T 3e05_A 102 GLDDLPDPDRVFIGGSGG---MLEEIIDAVDRRLKSEGVIVLNAVTLD----------------------TLTKAVEFLE 156 (204)
T ss_dssp TCTTSCCCSEEEESCCTT---CHHHHHHHHHHHCCTTCEEEEEECBHH----------------------HHHHHHHHHH
T ss_pred hhhcCCCCCEEEECCCCc---CHHHHHHHHHHhcCCCeEEEEEecccc----------------------cHHHHHHHHH
Confidence 543346899999988776 788999999999999999999775421 3467889999
Q ss_pred hCCCc
Q 019957 311 SCGLT 315 (333)
Q Consensus 311 ~aGf~ 315 (333)
++||.
T Consensus 157 ~~g~~ 161 (204)
T 3e05_A 157 DHGYM 161 (204)
T ss_dssp HTTCE
T ss_pred HCCCc
Confidence 99983
No 80
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.80 E-value=2e-19 Score=153.37 Aligned_cols=149 Identities=17% Similarity=0.259 Sum_probs=115.4
Q ss_pred cCCCeEEEEcCCcCHH-HHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEe
Q 019957 165 AQGGLLVDVSCGSGLF-SRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~-~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 243 (333)
.++.+|||+|||+|.+ ...+...+ .+++|+|+|+.+++.++++....+ .++.++.+|+.++++++++||+|++
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~ 95 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDG--YKTYGIEISDLQLKKAENFSRENN----FKLNISKGDIRKLPFKDESMSFVYS 95 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTT--CEEEEEECCHHHHHHHHHHHHHHT----CCCCEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcC----CceEEEECchhhCCCCCCceeEEEE
Confidence 4567999999999987 44555544 499999999999999999877653 4788999999999988889999999
Q ss_pred ccccccC--CChHHHHHHHHHhccCCcEEEEEEecccCCCcch---hhHH-H---HHhhhccCCCCCHHHHHHHHHhCCC
Q 019957 244 GAALHCW--PSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSL---TGRV-L---RERILQNYNYLTEEEIEDLCTSCGL 314 (333)
Q Consensus 244 ~~vl~h~--~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~---~~~~-~---~~~~~~~~~~~t~~~l~~ll~~aGf 314 (333)
..+++|+ .++..+++++.++|||||++++.++......... +... + ....+...++++.+++..+++++||
T Consensus 96 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~ 175 (209)
T 2p8j_A 96 YGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKV 175 (209)
T ss_dssp CSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEE
T ss_pred cChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCc
Confidence 9999999 5778999999999999999999998754211100 0000 0 0111123368899999999999999
Q ss_pred cEEEE
Q 019957 315 TNYTS 319 (333)
Q Consensus 315 ~~v~~ 319 (333)
...+.
T Consensus 176 ~~~~~ 180 (209)
T 2p8j_A 176 LFKED 180 (209)
T ss_dssp EEEEE
T ss_pred eeeee
Confidence 76654
No 81
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.79 E-value=2.3e-19 Score=161.05 Aligned_cols=157 Identities=18% Similarity=0.217 Sum_probs=111.1
Q ss_pred HHHHHhhcc--cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcC-------------CC--
Q 019957 156 KMAQEYFKS--AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI-------------LT-- 218 (333)
Q Consensus 156 ~~~~~~l~~--~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~-------------~~-- 218 (333)
..+.+.+.. .++.+|||||||+|.+...++... ..+|+|+|+|+.|++.|++++...... ..
T Consensus 59 ~~l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~ 137 (289)
T 2g72_A 59 RCLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSH-FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKG 137 (289)
T ss_dssp HHHHHHHHTSCSCCSEEEEETCTTCCGGGTTGGGG-CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSC
T ss_pred HHHHHHhCCCCCCCCeEEEECCCcChHHHHhhccC-CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcc
Confidence 344444433 357799999999999554444322 349999999999999998865431100 00
Q ss_pred ------------CCeEEEEccCCC-CCC-----CCCCcceEEecccccc----CCChHHHHHHHHHhccCCcEEEEEEec
Q 019957 219 ------------SNLALVRADVCR-LPF-----ASGFVDAVHAGAALHC----WPSPSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 219 ------------~~i~~~~~d~~~-lp~-----~~~~fD~V~~~~vl~h----~~d~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
..+.++.+|+.. +|+ ++++||+|+++.+++| ++++..+|+++.++|||||+|++....
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~ 217 (289)
T 2g72_A 138 ECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGAL 217 (289)
T ss_dssp CCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred cchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 015677789977 654 3467999999999999 667889999999999999999998643
Q ss_pred ccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCCcEEEEE
Q 019957 277 RYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSK 320 (333)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf~~v~~~ 320 (333)
.... ... .....+..+++.+++.++|+++||++++..
T Consensus 218 ~~~~-~~~------~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~ 254 (289)
T 2g72_A 218 EESW-YLA------GEARLTVVPVSEEEVREALVRSGYKVRDLR 254 (289)
T ss_dssp SCCE-EEE------TTEEEECCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred Ccce-EEc------CCeeeeeccCCHHHHHHHHHHcCCeEEEee
Confidence 3210 000 011123567899999999999999988754
No 82
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.79 E-value=2.3e-18 Score=146.59 Aligned_cols=138 Identities=16% Similarity=0.159 Sum_probs=117.0
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEec
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~ 244 (333)
.++.+|||+|||+|.++..+++.+ ..+++|+|+++.+++.+++++...+ ..++.++.+|+.+.+ +++||+|++.
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~~--~~~fD~i~~~ 132 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKLG-AKSVLATDISDESMTAAEENAALNG---IYDIALQKTSLLADV--DGKFDLIVAN 132 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTT---CCCCEEEESSTTTTC--CSCEEEEEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcC---CCceEEEeccccccC--CCCceEEEEC
Confidence 457899999999999999988864 5699999999999999999988876 335999999997754 5799999999
Q ss_pred cccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCCcEEEEEEeCe
Q 019957 245 AALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSKVQQS 324 (333)
Q Consensus 245 ~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf~~v~~~~~~~ 324 (333)
.+++++ ..+++++.++|||||++++.++... +.+++..+++++||++++....+.
T Consensus 133 ~~~~~~---~~~l~~~~~~L~~gG~l~~~~~~~~----------------------~~~~~~~~~~~~Gf~~~~~~~~~~ 187 (205)
T 3grz_A 133 ILAEIL---LDLIPQLDSHLNEDGQVIFSGIDYL----------------------QLPKIEQALAENSFQIDLKMRAGR 187 (205)
T ss_dssp SCHHHH---HHHGGGSGGGEEEEEEEEEEEEEGG----------------------GHHHHHHHHHHTTEEEEEEEEETT
T ss_pred CcHHHH---HHHHHHHHHhcCCCCEEEEEecCcc----------------------cHHHHHHHHHHcCCceEEeeccCC
Confidence 888874 7789999999999999999775432 357899999999999999888899
Q ss_pred EEEEEEeCC
Q 019957 325 FIMFAAQKP 333 (333)
Q Consensus 325 ~~~~~a~kp 333 (333)
|..++.++|
T Consensus 188 w~~~~~~~~ 196 (205)
T 3grz_A 188 WIGLAISRK 196 (205)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEecc
Confidence 977766543
No 83
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.79 E-value=2.3e-18 Score=160.22 Aligned_cols=163 Identities=17% Similarity=0.173 Sum_probs=123.0
Q ss_pred HHHHhhc-ccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCC
Q 019957 157 MAQEYFK-SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (333)
Q Consensus 157 ~~~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (333)
.+.+.+. ..++.+|||||||+|.++..+++.++..+++++|+ +.+++.+++ .+++.++.+|+.+ +++.
T Consensus 199 ~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~~~ 267 (372)
T 1fp1_D 199 RMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP---------LSGIEHVGGDMFA-SVPQ 267 (372)
T ss_dssp HHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------CTTEEEEECCTTT-CCCC
T ss_pred HHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh---------cCCCEEEeCCccc-CCCC
Confidence 3334443 34567999999999999999999998889999999 888877664 3579999999977 6553
Q ss_pred CCcceEEeccccccCCChH--HHHHHHHHhccCCcEEEEEEecccCCCc-ch---hhHHHHHhh--hccCCCCCHHHHHH
Q 019957 236 GFVDAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRYTSST-SL---TGRVLRERI--LQNYNYLTEEEIED 307 (333)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~--~~l~~~~r~LkpgG~l~i~~~~~~~~~~-~~---~~~~~~~~~--~~~~~~~t~~~l~~ 307 (333)
||+|++..+|||++++. .+|++++++|||||++++.++..+.... +. ....+.... ......++.++|.+
T Consensus 268 --~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ 345 (372)
T 1fp1_D 268 --GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEK 345 (372)
T ss_dssp --EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHH
T ss_pred --CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHH
Confidence 99999999999999988 9999999999999999999876543221 11 011111100 12345679999999
Q ss_pred HHHhCCCcEEEEEE-eCe-EEEEEEeC
Q 019957 308 LCTSCGLTNYTSKV-QQS-FIMFAAQK 332 (333)
Q Consensus 308 ll~~aGf~~v~~~~-~~~-~~~~~a~k 332 (333)
+++++||++++... ... +.++.++|
T Consensus 346 ll~~aGf~~~~~~~~~~~~~~vie~~~ 372 (372)
T 1fp1_D 346 LSKLSGFSKFQVACRAFNSLGVMEFYK 372 (372)
T ss_dssp HHHHTTCSEEEEEEEETTTEEEEEEEC
T ss_pred HHHHCCCceEEEEEcCCCCeEEEEEeC
Confidence 99999999988765 333 66665554
No 84
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.79 E-value=3.9e-18 Score=151.92 Aligned_cols=152 Identities=18% Similarity=0.136 Sum_probs=116.6
Q ss_pred HHHHhhc-ccCCCeEEEEcCCc---CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC
Q 019957 157 MAQEYFK-SAQGGLLVDVSCGS---GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP 232 (333)
Q Consensus 157 ~~~~~l~-~~~~~~vLDiGcG~---G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp 232 (333)
.+.+.+. ..+..+|||||||+ |.++..+.+..+..+|+++|+|+.|++.+++++.. ..++.++.+|+.+.+
T Consensus 67 ~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~-----~~~v~~~~~D~~~~~ 141 (274)
T 2qe6_A 67 RGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK-----DPNTAVFTADVRDPE 141 (274)
T ss_dssp HHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT-----CTTEEEEECCTTCHH
T ss_pred HHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC-----CCCeEEEEeeCCCch
Confidence 3334444 33447999999999 99888888877778999999999999999998754 458999999997531
Q ss_pred -----------CCCCCcceEEeccccccCCC--hHHHHHHHHHhccCCcEEEEEEecccCCCcchh---hHHHHHhhhcc
Q 019957 233 -----------FASGFVDAVHAGAALHCWPS--PSNAVAEISRILRSGGVFVGTTFLRYTSSTSLT---GRVLRERILQN 296 (333)
Q Consensus 233 -----------~~~~~fD~V~~~~vl~h~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~---~~~~~~~~~~~ 296 (333)
+...+||+|++..+|||+++ +..+|++++++|||||+|++.+..... .... ...+.. ....
T Consensus 142 ~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~--~~~~~~~~~~~~~-~~~~ 218 (274)
T 2qe6_A 142 YILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTG--LPAQQKLARITRE-NLGE 218 (274)
T ss_dssp HHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSS--CHHHHHHHHHHHH-HHSC
T ss_pred hhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcc--hHHHHHHHHHHHh-cCCC
Confidence 22248999999999999987 789999999999999999999987532 1111 111211 1234
Q ss_pred CCCCCHHHHHHHHHhCCCcEEE
Q 019957 297 YNYLTEEEIEDLCTSCGLTNYT 318 (333)
Q Consensus 297 ~~~~t~~~l~~ll~~aGf~~v~ 318 (333)
..+++.+++..+| .||++++
T Consensus 219 ~~~~s~~ei~~~l--~G~~l~~ 238 (274)
T 2qe6_A 219 GWARTPEEIERQF--GDFELVE 238 (274)
T ss_dssp CCCBCHHHHHHTT--TTCEECT
T ss_pred CccCCHHHHHHHh--CCCeEcc
Confidence 6678999999999 5998764
No 85
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.78 E-value=3.3e-19 Score=160.45 Aligned_cols=153 Identities=18% Similarity=0.179 Sum_probs=112.2
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcC-----------------------------
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI----------------------------- 216 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~----------------------------- 216 (333)
++.+|||||||+|.++..+++..+..+|+|+|+|+.+++.|++++...+..
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 578999999999999999999976779999999999999999876543210
Q ss_pred --------------------------CCCCeEEEEccCCCCC-----CCCCCcceEEeccccccCC------ChHHHHHH
Q 019957 217 --------------------------LTSNLALVRADVCRLP-----FASGFVDAVHAGAALHCWP------SPSNAVAE 259 (333)
Q Consensus 217 --------------------------~~~~i~~~~~d~~~lp-----~~~~~fD~V~~~~vl~h~~------d~~~~l~~ 259 (333)
...++.++++|+...+ +.+++||+|++..+++|+. ++.+++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 0148999999997654 5678999999999998875 67789999
Q ss_pred HHHhccCCcEEEEEEecccCC-CcchhhHHHHHhhhccCCCCCHHHHHHHHHh--CCCcEEEEE
Q 019957 260 ISRILRSGGVFVGTTFLRYTS-STSLTGRVLRERILQNYNYLTEEEIEDLCTS--CGLTNYTSK 320 (333)
Q Consensus 260 ~~r~LkpgG~l~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~--aGf~~v~~~ 320 (333)
+.++|||||+|++........ ....+........ +...+.++++..+|.+ +||+.++..
T Consensus 206 ~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~--~~~~~~p~~~~~~L~~~~~GF~~~~~~ 267 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNY--YRIQLKPEQFSSYLTSPDVGFSSYELV 267 (292)
T ss_dssp HHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHH--HHCCCCGGGHHHHHTSTTTCCCEEEEC
T ss_pred HHHHhCCCcEEEEecCCchhhhhhhcccHHHHhhh--hcEEEcHHHHHHHHHhcCCCceEEEEe
Confidence 999999999999975432100 0000111111111 1223558999999999 999887753
No 86
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.78 E-value=8.3e-18 Score=156.15 Aligned_cols=156 Identities=14% Similarity=0.165 Sum_probs=118.9
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEe
Q 019957 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (333)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 243 (333)
..+..+|||||||+|.++..+++.+|..+++++|+ +.+++.+++ ..++.++.+|+.+ +++++ |+|++
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~p~~--D~v~~ 267 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA---------FSGVEHLGGDMFD-GVPKG--DAIFI 267 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------CTTEEEEECCTTT-CCCCC--SEEEE
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh---------cCCCEEEecCCCC-CCCCC--CEEEE
Confidence 34567999999999999999999998889999999 888876654 4689999999986 65544 99999
Q ss_pred ccccccCCChH--HHHHHHHHhccCCcEEEEEEecccCCCcc-hh---hHHHHHhh---hccCCCCCHHHHHHHHHhCCC
Q 019957 244 GAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRYTSSTS-LT---GRVLRERI---LQNYNYLTEEEIEDLCTSCGL 314 (333)
Q Consensus 244 ~~vl~h~~d~~--~~l~~~~r~LkpgG~l~i~~~~~~~~~~~-~~---~~~~~~~~---~~~~~~~t~~~l~~ll~~aGf 314 (333)
..++||++++. ++|++++++|||||+|++.+...+..... .. ...+.-.. ......++.++|+++++++||
T Consensus 268 ~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF 347 (368)
T 3reo_A 268 KWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGF 347 (368)
T ss_dssp ESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTC
T ss_pred echhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCC
Confidence 99999998775 78999999999999999999775432211 10 11111111 124567899999999999999
Q ss_pred cEEEEEEe-CeEEEEEEeC
Q 019957 315 TNYTSKVQ-QSFIMFAAQK 332 (333)
Q Consensus 315 ~~v~~~~~-~~~~~~~a~k 332 (333)
+++++... +.+.++.+.|
T Consensus 348 ~~v~~~~~~~~~~vie~~k 366 (368)
T 3reo_A 348 RGFKVASCAFNTYVMEFLK 366 (368)
T ss_dssp CEEEEEEEETTEEEEEEEC
T ss_pred eeeEEEEeCCCcEEEEEEe
Confidence 99987543 3444555544
No 87
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.78 E-value=1.1e-17 Score=146.87 Aligned_cols=162 Identities=20% Similarity=0.285 Sum_probs=119.2
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEe
Q 019957 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (333)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 243 (333)
..++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++....+ .++.++++|+.++++. ++||+|++
T Consensus 39 ~~~~~~vLDlGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~----~~v~~~~~d~~~~~~~-~~fD~v~~ 111 (252)
T 1wzn_A 39 KREVRRVLDLACGTGIPTLELAERGY--EVVGLDLHEEMLRVARRKAKERN----LKIEFLQGDVLEIAFK-NEFDAVTM 111 (252)
T ss_dssp SSCCCEEEEETCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT----CCCEEEESCGGGCCCC-SCEEEEEE
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHhcC----CceEEEECChhhcccC-CCccEEEE
Confidence 34567999999999999999998865 99999999999999999887654 3789999999988764 68999998
Q ss_pred cc-ccccCC--ChHHHHHHHHHhccCCcEEEEEEecccCC--Cc----------------ch--hhH------------H
Q 019957 244 GA-ALHCWP--SPSNAVAEISRILRSGGVFVGTTFLRYTS--ST----------------SL--TGR------------V 288 (333)
Q Consensus 244 ~~-vl~h~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~--~~----------------~~--~~~------------~ 288 (333)
.. +++|+. +...+++++.++|||||.+++..++.... .. .+ +.. .
T Consensus 112 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (252)
T 1wzn_A 112 FFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFPCWFYGGRDGPVVWNEQKGEEKLVIMDWREVEPAVQKLRFKRLVQI 191 (252)
T ss_dssp CSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC-------CCEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEEEE
T ss_pred cCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEeccchhcccCCCCeeeeccCCCeeEEEEeecccccccceeeheeeeee
Confidence 64 455553 45689999999999999999876652100 00 00 000 0
Q ss_pred H-HHh------hhccCCCCCHHHHHHHHHhCCCcEEEEEEe--------CeEEEEEEeCC
Q 019957 289 L-RER------ILQNYNYLTEEEIEDLCTSCGLTNYTSKVQ--------QSFIMFAAQKP 333 (333)
Q Consensus 289 ~-~~~------~~~~~~~~t~~~l~~ll~~aGf~~v~~~~~--------~~~~~~~a~kp 333 (333)
. ... ...+.++++.++++ +++++||++++.... ..-++++++||
T Consensus 192 ~~~~g~~~~~~~~~~~~~~~~~e~~-~l~~aGF~~~~~~~~~~~~~~~~~~r~~~va~k~ 250 (252)
T 1wzn_A 192 LRPNGEVKAFLVDDELNIYTPREVR-LLAEKYFEKVKIYGNLKRELSPNDMRYWIVGIAK 250 (252)
T ss_dssp ECTTSCEEEEEEEEEEECCCHHHHH-HHHTTTSSEEEEEETTBSSCCTTCCEEEEEEECC
T ss_pred cccCCceeEEEEeeeeeeecHHHHH-HHHHhcCceeeeecccccccCCCCceEEEEEEee
Confidence 0 000 01345789999997 899999999886432 23477888875
No 88
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.78 E-value=1.7e-18 Score=148.54 Aligned_cols=114 Identities=15% Similarity=0.264 Sum_probs=99.9
Q ss_pred HHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCC
Q 019957 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (333)
Q Consensus 156 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (333)
..+...+...++.+|||||||+|.++..+++.+. +++|+|+|+.+++.++++... ..++.++.+|+.+++ .+
T Consensus 41 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~~d~~~~~-~~ 112 (216)
T 3ofk_A 41 QLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCK--RLTVIDVMPRAIGRACQRTKR-----WSHISWAATDILQFS-TA 112 (216)
T ss_dssp HHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEE--EEEEEESCHHHHHHHHHHTTT-----CSSEEEEECCTTTCC-CS
T ss_pred HHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHhccc-----CCCeEEEEcchhhCC-CC
Confidence 4455556666678999999999999999999875 999999999999999998765 348999999999988 57
Q ss_pred CCcceEEeccccccCCCh---HHHHHHHHHhccCCcEEEEEEecc
Q 019957 236 GFVDAVHAGAALHCWPSP---SNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~---~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
++||+|++..+++|++++ ..+++++.++|||||.+++.++..
T Consensus 113 ~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 113 ELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp CCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred CCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 899999999999999998 467999999999999999988754
No 89
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.78 E-value=1.4e-17 Score=154.30 Aligned_cols=162 Identities=18% Similarity=0.171 Sum_probs=121.2
Q ss_pred HHHhhc-ccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCC
Q 019957 158 AQEYFK-SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG 236 (333)
Q Consensus 158 ~~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~ 236 (333)
+...+. ..+..+|||||||+|.++..+++.+|..+++++|+ +.+++.+++ ..++.++.+|+.+ |++.+
T Consensus 192 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~D~~~-~~p~~ 260 (364)
T 3p9c_A 192 LLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ---------FPGVTHVGGDMFK-EVPSG 260 (364)
T ss_dssp HHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------CTTEEEEECCTTT-CCCCC
T ss_pred HHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh---------cCCeEEEeCCcCC-CCCCC
Confidence 444444 44567999999999999999999998889999999 888776654 4689999999987 66654
Q ss_pred CcceEEeccccccCCCh--HHHHHHHHHhccCCcEEEEEEecccCCCc-chhhH--HHHH-h---hhccCCCCCHHHHHH
Q 019957 237 FVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYTSST-SLTGR--VLRE-R---ILQNYNYLTEEEIED 307 (333)
Q Consensus 237 ~fD~V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~-~~~~~--~~~~-~---~~~~~~~~t~~~l~~ 307 (333)
|+|++..+|||+++. .++|++++++|||||+|++.+...+.... ..... .... . .......++.++|++
T Consensus 261 --D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ 338 (364)
T 3p9c_A 261 --DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQA 338 (364)
T ss_dssp --SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHH
T ss_pred --CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHH
Confidence 999999999999776 48899999999999999999877643221 11010 1111 1 113445689999999
Q ss_pred HHHhCCCcEEEEEE-eCeEEEEEEeC
Q 019957 308 LCTSCGLTNYTSKV-QQSFIMFAAQK 332 (333)
Q Consensus 308 ll~~aGf~~v~~~~-~~~~~~~~a~k 332 (333)
+++++||+++++.. ...+.++.+.|
T Consensus 339 ll~~AGF~~v~~~~~~~~~~vie~~k 364 (364)
T 3p9c_A 339 LARGAGFTGVKSTYIYANAWAIEFTK 364 (364)
T ss_dssp HHHHTTCCEEEEEEEETTEEEEEEEC
T ss_pred HHHHCCCceEEEEEcCCceEEEEEeC
Confidence 99999999998754 33344444443
No 90
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.77 E-value=1.5e-17 Score=163.90 Aligned_cols=164 Identities=13% Similarity=0.111 Sum_probs=126.4
Q ss_pred HHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhcCc---CCCCCeEEEEccC
Q 019957 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNT---ILTSNLALVRADV 228 (333)
Q Consensus 153 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~---~~~~~i~~~~~d~ 228 (333)
...+.+.+.+...++.+|||||||+|.++..+++.+ +..+|+|+|+|+.+++.|++++..... ....++.++++|+
T Consensus 708 qRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa 787 (950)
T 3htx_A 708 QRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSI 787 (950)
T ss_dssp HHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCT
T ss_pred HHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECch
Confidence 445666777776778899999999999999999987 446999999999999999987653210 0145899999999
Q ss_pred CCCCCCCCCcceEEeccccccCCChH--HHHHHHHHhccCCcEEEEEEecccCCCcchhhHH-------H-------HHh
Q 019957 229 CRLPFASGFVDAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRV-------L-------RER 292 (333)
Q Consensus 229 ~~lp~~~~~fD~V~~~~vl~h~~d~~--~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~-------~-------~~~ 292 (333)
.++++.+++||+|++..+++|++++. .+++++.++|||| .+++.+++... ...+... . .-+
T Consensus 788 ~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ey--N~lF~~Lnp~tr~~dPd~~~~~~fR 864 (950)
T 3htx_A 788 LEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEF--NTILQRSTPETQEENNSEPQLPKFR 864 (950)
T ss_dssp TSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGG--HHHHTCC------------CCSSCS
T ss_pred HhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchh--hhhhhhccccccccccccccccccc
Confidence 99999889999999999999999876 5899999999999 88998887631 1111100 0 002
Q ss_pred hhccCCCCCHHHHHH----HHHhCCCcEEEE
Q 019957 293 ILQNYNYLTEEEIED----LCTSCGLTNYTS 319 (333)
Q Consensus 293 ~~~~~~~~t~~~l~~----ll~~aGf~~v~~ 319 (333)
...|...++.++++. +.++.||.+.-.
T Consensus 865 h~DHrFEWTReEFr~Wae~LAer~GYsVefv 895 (950)
T 3htx_A 865 NHDHKFEWTREQFNQWASKLGKRHNYSVEFS 895 (950)
T ss_dssp CSSCSCCBCHHHHHHHHHHHHHHTTEEEEEE
T ss_pred ccCcceeecHHHHHHHHHHHHHhcCcEEEEE
Confidence 235566688888887 778889976554
No 91
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.76 E-value=2.5e-17 Score=142.90 Aligned_cols=147 Identities=14% Similarity=0.163 Sum_probs=110.6
Q ss_pred hcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC----CCCCCCC
Q 019957 162 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR----LPFASGF 237 (333)
Q Consensus 162 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~----lp~~~~~ 237 (333)
+...++.+|||+|||+|.++..+++..+..+|+|+|+|+.+++.++++... ..++.++.+|+.. +++. ++
T Consensus 70 ~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~-----~~~v~~~~~d~~~~~~~~~~~-~~ 143 (230)
T 1fbn_A 70 MPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAE-----RENIIPILGDANKPQEYANIV-EK 143 (230)
T ss_dssp CCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTT-----CTTEEEEECCTTCGGGGTTTS-CC
T ss_pred cCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhc-----CCCeEEEECCCCCcccccccC-cc
Confidence 344567899999999999999999985456999999999999999988655 3589999999988 6765 78
Q ss_pred cceEEeccccccCCCh---HHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCC
Q 019957 238 VDAVHAGAALHCWPSP---SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGL 314 (333)
Q Consensus 238 fD~V~~~~vl~h~~d~---~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf 314 (333)
||+|+ ++++++ ..+++++.++|||||.+++..........+... .+..+++. +++++||
T Consensus 144 ~D~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~------------~~~~~~l~-~l~~~Gf 205 (230)
T 1fbn_A 144 VDVIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPK------------EIFKEQKE-ILEAGGF 205 (230)
T ss_dssp EEEEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHH------------HHHHHHHH-HHHHHTE
T ss_pred EEEEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHH------------HhhHHHHH-HHHHCCC
Confidence 99998 556777 778999999999999999973221111110000 11236787 8999999
Q ss_pred cEEEEEEeCe----EEEEEEeC
Q 019957 315 TNYTSKVQQS----FIMFAAQK 332 (333)
Q Consensus 315 ~~v~~~~~~~----~~~~~a~k 332 (333)
++++...... ..+++++|
T Consensus 206 ~~~~~~~~~~~~~~~~~v~~~k 227 (230)
T 1fbn_A 206 KIVDEVDIEPFEKDHVMFVGIW 227 (230)
T ss_dssp EEEEEEECTTTSTTEEEEEEEE
T ss_pred EEEEEEccCCCccceEEEEEEe
Confidence 9988665443 46666655
No 92
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.76 E-value=8.6e-17 Score=137.00 Aligned_cols=138 Identities=15% Similarity=0.149 Sum_probs=111.4
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC
Q 019957 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (333)
Q Consensus 152 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (333)
......+...+...++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|+++++..++ ..++.++.+|+.+.
T Consensus 41 ~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~g~--~~~v~~~~~d~~~~ 116 (204)
T 3njr_A 41 SPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLAG--GRAITIEPRADRIENIQKNIDTYGL--SPRMRAVQGTAPAA 116 (204)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCTTGG
T ss_pred HHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHcCC--CCCEEEEeCchhhh
Confidence 3444566677777778899999999999999999884 4999999999999999999988773 33899999999873
Q ss_pred CCCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHh
Q 019957 232 PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTS 311 (333)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~ 311 (333)
......||+|++...+ ++. +++++.++|||||++++...... +..++.+++++
T Consensus 117 ~~~~~~~D~v~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~~~~----------------------~~~~~~~~l~~ 169 (204)
T 3njr_A 117 LADLPLPEAVFIGGGG----SQA-LYDRLWEWLAPGTRIVANAVTLE----------------------SETLLTQLHAR 169 (204)
T ss_dssp GTTSCCCSEEEECSCC----CHH-HHHHHHHHSCTTCEEEEEECSHH----------------------HHHHHHHHHHH
T ss_pred cccCCCCCEEEECCcc----cHH-HHHHHHHhcCCCcEEEEEecCcc----------------------cHHHHHHHHHh
Confidence 3234579999987754 566 99999999999999999875431 24577888999
Q ss_pred CCCcEEEEE
Q 019957 312 CGLTNYTSK 320 (333)
Q Consensus 312 aGf~~v~~~ 320 (333)
.|+++....
T Consensus 170 ~g~~i~~i~ 178 (204)
T 3njr_A 170 HGGQLLRID 178 (204)
T ss_dssp HCSEEEEEE
T ss_pred CCCcEEEEE
Confidence 999877653
No 93
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.76 E-value=4.3e-18 Score=150.43 Aligned_cols=149 Identities=26% Similarity=0.355 Sum_probs=112.3
Q ss_pred HHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCC
Q 019957 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (333)
Q Consensus 156 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (333)
+.+...+. ++.+|||||||+|.++..+++.+. +++|+|+|+.+++.++++.. . .++.+|+.++++++
T Consensus 46 ~~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~--------~-~~~~~d~~~~~~~~ 112 (260)
T 2avn_A 46 SFLEEYLK--NPCRVLDLGGGTGKWSLFLQERGF--EVVLVDPSKEMLEVAREKGV--------K-NVVEAKAEDLPFPS 112 (260)
T ss_dssp HHHHHHCC--SCCEEEEETCTTCHHHHHHHTTTC--EEEEEESCHHHHHHHHHHTC--------S-CEEECCTTSCCSCT
T ss_pred HHHHHhcC--CCCeEEEeCCCcCHHHHHHHHcCC--eEEEEeCCHHHHHHHHhhcC--------C-CEEECcHHHCCCCC
Confidence 34444443 577999999999999999998864 99999999999999998632 1 28899999999888
Q ss_pred CCcceEEeccccccC-CChHHHHHHHHHhccCCcEEEEEEecccCCCcc------h--hhHHHHHhhhc--------cCC
Q 019957 236 GFVDAVHAGAALHCW-PSPSNAVAEISRILRSGGVFVGTTFLRYTSSTS------L--TGRVLRERILQ--------NYN 298 (333)
Q Consensus 236 ~~fD~V~~~~vl~h~-~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~------~--~~~~~~~~~~~--------~~~ 298 (333)
++||+|++..+++|+ +++..+|+++.++|||||.+++.+++....... + ....+...... ..+
T Consensus 113 ~~fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (260)
T 2avn_A 113 GAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNFYTFLQQMIEKDAWDQITRFLKTQTTSVGTTLFSFNSY 192 (260)
T ss_dssp TCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHHHHHHCEEEEECSSEEEEEE
T ss_pred CCEEEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeCChHHHHHHhhcchhHHHHHHHHhccccccCCCceeEEEe
Confidence 999999999877776 789999999999999999999999875311000 0 00001110000 113
Q ss_pred CCCHHHHHHHHHhCCCcEEEEE
Q 019957 299 YLTEEEIEDLCTSCGLTNYTSK 320 (333)
Q Consensus 299 ~~t~~~l~~ll~~aGf~~v~~~ 320 (333)
+++.+++..+ +||++++..
T Consensus 193 ~~~~~~l~~l---aGf~~~~~~ 211 (260)
T 2avn_A 193 AFKPEDLDSL---EGFETVDIR 211 (260)
T ss_dssp CBCGGGGSSC---TTEEEEEEE
T ss_pred ccCHHHHHHh---cCceEEEEE
Confidence 7899999888 999988754
No 94
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.76 E-value=2.8e-17 Score=136.26 Aligned_cols=137 Identities=18% Similarity=0.158 Sum_probs=109.7
Q ss_pred HHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC-CC
Q 019957 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LP 232 (333)
Q Consensus 154 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-lp 232 (333)
....+.+.+...++.+|||+|||+|.++..+++..+..+++|+|+++.+++.+++++...++ ..++ ++.+|..+ ++
T Consensus 13 ~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~-~~~~d~~~~~~ 89 (178)
T 3hm2_A 13 VRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGV--SDRI-AVQQGAPRAFD 89 (178)
T ss_dssp HHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTC--TTSE-EEECCTTGGGG
T ss_pred HHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCC--CCCE-EEecchHhhhh
Confidence 34556666777778899999999999999999987677999999999999999999888763 3378 88888744 34
Q ss_pred CCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhC
Q 019957 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSC 312 (333)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~a 312 (333)
..+++||+|++..+++| ..+++++.++|||||++++.+.... +...+..++++.
T Consensus 90 ~~~~~~D~i~~~~~~~~----~~~l~~~~~~L~~gG~l~~~~~~~~----------------------~~~~~~~~~~~~ 143 (178)
T 3hm2_A 90 DVPDNPDVIFIGGGLTA----PGVFAAAWKRLPVGGRLVANAVTVE----------------------SEQMLWALRKQF 143 (178)
T ss_dssp GCCSCCSEEEECC-TTC----TTHHHHHHHTCCTTCEEEEEECSHH----------------------HHHHHHHHHHHH
T ss_pred ccCCCCCEEEECCcccH----HHHHHHHHHhcCCCCEEEEEeeccc----------------------cHHHHHHHHHHc
Confidence 32379999999999988 6679999999999999999875432 235677888888
Q ss_pred CCcEEEE
Q 019957 313 GLTNYTS 319 (333)
Q Consensus 313 Gf~~v~~ 319 (333)
|++....
T Consensus 144 ~~~~~~~ 150 (178)
T 3hm2_A 144 GGTISSF 150 (178)
T ss_dssp CCEEEEE
T ss_pred CCeeEEE
Confidence 8877654
No 95
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.75 E-value=1.4e-17 Score=153.67 Aligned_cols=154 Identities=16% Similarity=0.186 Sum_probs=117.5
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEec
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~ 244 (333)
.+..+|||||||+|.++..+++.+|..+++++|+ +.+++.+++ ..++.++.+|+.+ +++ .||+|++.
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~p--~~D~v~~~ 253 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG---------SNNLTYVGGDMFT-SIP--NADAVLLK 253 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------BTTEEEEECCTTT-CCC--CCSEEEEE
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc---------CCCcEEEeccccC-CCC--CccEEEee
Confidence 3567999999999999999999988889999999 998887764 3469999999966 544 39999999
Q ss_pred cccccCCChH--HHHHHHHHhccC---CcEEEEEEecccCCCcc----hhhHHHHHhhh-ccCCCCCHHHHHHHHHhCCC
Q 019957 245 AALHCWPSPS--NAVAEISRILRS---GGVFVGTTFLRYTSSTS----LTGRVLRERIL-QNYNYLTEEEIEDLCTSCGL 314 (333)
Q Consensus 245 ~vl~h~~d~~--~~l~~~~r~Lkp---gG~l~i~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~t~~~l~~ll~~aGf 314 (333)
.+|||++++. ++|++++++||| ||++++.++........ .....+.-... .....++.++|.++++++||
T Consensus 254 ~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf 333 (352)
T 1fp2_A 254 YILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGF 333 (352)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTC
T ss_pred hhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCC
Confidence 9999999987 999999999999 99999998775432211 11111111000 11445789999999999999
Q ss_pred cEEEEEEeCe-EEEEEEe
Q 019957 315 TNYTSKVQQS-FIMFAAQ 331 (333)
Q Consensus 315 ~~v~~~~~~~-~~~~~a~ 331 (333)
+++++..... ..++.++
T Consensus 334 ~~~~~~~~~~~~~vie~~ 351 (352)
T 1fp2_A 334 QHYKISPLTGFLSLIEIY 351 (352)
T ss_dssp CEEEEEEEETTEEEEEEE
T ss_pred CeeEEEecCCCcEEEEEe
Confidence 9988755333 3555554
No 96
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.75 E-value=3.5e-17 Score=137.21 Aligned_cols=151 Identities=13% Similarity=0.211 Sum_probs=118.7
Q ss_pred HHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCC--eEEEEccCCC
Q 019957 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSN--LALVRADVCR 230 (333)
Q Consensus 153 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~--i~~~~~d~~~ 230 (333)
...+.+.+.+...++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.+++++...+ ..+ +.++.+|+.+
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~~--~~v~~~D~~~~~~~~a~~~~~~~~---~~~~~~~~~~~d~~~ 113 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADEV--KSTTMADINRRAIKLAKENIKLNN---LDNYDIRVVHSDLYE 113 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHTT---CTTSCEEEEECSTTT
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHcC--CeEEEEECCHHHHHHHHHHHHHcC---CCccceEEEECchhc
Confidence 455667777776678899999999999999999884 499999999999999999988766 344 9999999977
Q ss_pred CCCCCCCcceEEecccccc-CCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHH
Q 019957 231 LPFASGFVDAVHAGAALHC-WPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLC 309 (333)
Q Consensus 231 lp~~~~~fD~V~~~~vl~h-~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll 309 (333)
. +.+++||+|++..+++| ..+...+++++.++|+|||.+++.++... ...++.+.+
T Consensus 114 ~-~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~----------------------~~~~~~~~l 170 (194)
T 1dus_A 114 N-VKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTKQ----------------------GAKSLAKYM 170 (194)
T ss_dssp T-CTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEESTH----------------------HHHHHHHHH
T ss_pred c-cccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCCC----------------------ChHHHHHHH
Confidence 3 34678999999988887 34567899999999999999999987642 113466666
Q ss_pred HhCCCcEEE-EEEeCeEEEEEEeC
Q 019957 310 TSCGLTNYT-SKVQQSFIMFAAQK 332 (333)
Q Consensus 310 ~~aGf~~v~-~~~~~~~~~~~a~k 332 (333)
++. |..++ ......|.++.++|
T Consensus 171 ~~~-~~~~~~~~~~~~~~~~~~~k 193 (194)
T 1dus_A 171 KDV-FGNVETVTIKGGYRVLKSKK 193 (194)
T ss_dssp HHH-HSCCEEEEEETTEEEEEEEC
T ss_pred HHH-hcceEEEecCCcEEEEEEee
Confidence 666 43333 34566788888776
No 97
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.75 E-value=4.6e-18 Score=153.49 Aligned_cols=155 Identities=13% Similarity=0.118 Sum_probs=109.0
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCC---CCCeEEEEccC------CCC--CCC
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTIL---TSNLALVRADV------CRL--PFA 234 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~---~~~i~~~~~d~------~~l--p~~ 234 (333)
++.+|||||||+|..+..+...+ ..+|+|+|+|+.|++.|+++....+... ..++.+.+.|+ .++ +++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~-~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE-IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhcC-CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 46799999999998666555544 3489999999999999999876643100 01367888887 222 245
Q ss_pred CCCcceEEeccccccC---CChHHHHHHHHHhccCCcEEEEEEecccCCCc-----------c-hhhHH-----------
Q 019957 235 SGFVDAVHAGAALHCW---PSPSNAVAEISRILRSGGVFVGTTFLRYTSST-----------S-LTGRV----------- 288 (333)
Q Consensus 235 ~~~fD~V~~~~vl~h~---~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~-----------~-~~~~~----------- 288 (333)
+++||+|+|..++||+ .+...+|+++.++|||||+|++.+++...... . .....
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 206 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIADDR 206 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEETTE
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeeccccccc
Confidence 7899999999999875 45578999999999999999999987531000 0 00000
Q ss_pred ---HHHh---hhccCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019957 289 ---LRER---ILQNYNYLTEEEIEDLCTSCGLTNYTSKV 321 (333)
Q Consensus 289 ---~~~~---~~~~~~~~t~~~l~~ll~~aGf~~v~~~~ 321 (333)
+... .....++.+.+++..+++++||+++....
T Consensus 207 ~~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~ 245 (302)
T 2vdw_A 207 IVVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVD 245 (302)
T ss_dssp EEEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEEE
T ss_pred cceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEecC
Confidence 0000 00112467789999999999999988644
No 98
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.75 E-value=8.6e-18 Score=146.96 Aligned_cols=143 Identities=15% Similarity=0.078 Sum_probs=112.3
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCC-----CCcc
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS-----GFVD 239 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~-----~~fD 239 (333)
.++.+|||||||+|.++..+++.++ +|+|+|+|+.+++.++++.. ..++.++++|+.++++.. ..||
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~~~~~~~~~~~d 126 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENT------AANISYRLLDGLVPEQAAQIHSEIGDA 126 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSC------CTTEEEEECCTTCHHHHHHHHHHHCSC
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCc------ccCceEEECcccccccccccccccCcc
Confidence 4567999999999999999999987 99999999999999998762 347999999998865332 2499
Q ss_pred eEEeccccccCC--ChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHH----------H--hhhccCCCCCHHHH
Q 019957 240 AVHAGAALHCWP--SPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLR----------E--RILQNYNYLTEEEI 305 (333)
Q Consensus 240 ~V~~~~vl~h~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~----------~--~~~~~~~~~t~~~l 305 (333)
+|++..+++|++ ++..+++++.++|||||++++.++.... ..++..... . ........++.+++
T Consensus 127 ~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (245)
T 3ggd_A 127 NIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGC--IDFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDI 204 (245)
T ss_dssp EEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTH--HHHHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHHH
T ss_pred EEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccc--cHHHHHHHhCCCCCchhhhhccccCCCCCccCHHHH
Confidence 999999999998 7889999999999999999999876541 111000000 0 00112245899999
Q ss_pred HHHHHhCCCcEEEE
Q 019957 306 EDLCTSCGLTNYTS 319 (333)
Q Consensus 306 ~~ll~~aGf~~v~~ 319 (333)
.+++ +||+++..
T Consensus 205 ~~~~--aGf~~~~~ 216 (245)
T 3ggd_A 205 ELYF--PDFEILSQ 216 (245)
T ss_dssp HHHC--TTEEEEEE
T ss_pred HHHh--CCCEEEec
Confidence 9999 99999874
No 99
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.75 E-value=3.9e-18 Score=146.56 Aligned_cols=152 Identities=20% Similarity=0.208 Sum_probs=107.5
Q ss_pred hhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHH----HhcCcCCCCCeEEEEccCCCCCCCCC
Q 019957 161 YFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFI----KQDNTILTSNLALVRADVCRLPFASG 236 (333)
Q Consensus 161 ~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~----~~~~~~~~~~i~~~~~d~~~lp~~~~ 236 (333)
.+...++.+|||||||+|.++..+++.++..+|+|+|+|+.+++.+.++. ...+ .+++.++++|+.++|+.++
T Consensus 22 ~l~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~---~~~v~~~~~d~~~l~~~~~ 98 (218)
T 3mq2_A 22 QLRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGG---LPNLLYLWATAERLPPLSG 98 (218)
T ss_dssp HHHTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTC---CTTEEEEECCSTTCCSCCC
T ss_pred HhhccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcC---CCceEEEecchhhCCCCCC
Confidence 34456678999999999999999999987789999999999888643333 2233 4589999999999998766
Q ss_pred CcceEEe---cccc--ccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHh
Q 019957 237 FVDAVHA---GAAL--HCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTS 311 (333)
Q Consensus 237 ~fD~V~~---~~vl--~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~ 311 (333)
+ |.|+. ...+ +|++++..+++++.++|||||++++....... .... . .. ...+.....+..+++..++++
T Consensus 99 ~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~-~~~~-~-~~-~~~~~~~~~~~~~~l~~~l~~ 173 (218)
T 3mq2_A 99 V-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAW-RPSV-P-EV-GEHPEPTPDSADEWLAPRYAE 173 (218)
T ss_dssp E-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGB-TTBC-G-GG-TTCCCCCHHHHHHHHHHHHHH
T ss_pred C-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccc-cccc-c-cc-ccCCccchHHHHHHHHHHHHH
Confidence 6 66663 3334 38899999999999999999999996543220 0000 0 00 011111111224558889999
Q ss_pred CCCcEEEEE
Q 019957 312 CGLTNYTSK 320 (333)
Q Consensus 312 aGf~~v~~~ 320 (333)
+||++.+..
T Consensus 174 aGf~i~~~~ 182 (218)
T 3mq2_A 174 AGWKLADCR 182 (218)
T ss_dssp TTEEEEEEE
T ss_pred cCCCceeee
Confidence 999988754
No 100
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.74 E-value=2e-17 Score=141.24 Aligned_cols=115 Identities=21% Similarity=0.308 Sum_probs=97.4
Q ss_pred HHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCC
Q 019957 155 FKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA 234 (333)
Q Consensus 155 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~ 234 (333)
.+.+...+ .++.+|||+|||+|.++..+++.++. +++|+|+|+.+++.++++... ..++.++.+|+.+++++
T Consensus 33 ~~~l~~~~--~~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~-----~~~i~~~~~d~~~~~~~ 104 (215)
T 2pxx_A 33 RALLEPEL--RPEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAH-----VPQLRWETMDVRKLDFP 104 (215)
T ss_dssp HHHHGGGC--CTTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTT-----CTTCEEEECCTTSCCSC
T ss_pred HHHHHHhc--CCCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhccc-----CCCcEEEEcchhcCCCC
Confidence 34444443 45779999999999999999998743 899999999999999987654 35899999999998888
Q ss_pred CCCcceEEeccccccCC---------------ChHHHHHHHHHhccCCcEEEEEEecc
Q 019957 235 SGFVDAVHAGAALHCWP---------------SPSNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 235 ~~~fD~V~~~~vl~h~~---------------d~~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
+++||+|++..+++|+. ++..+++++.++|||||.+++.++..
T Consensus 105 ~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 105 SASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp SSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 88999999999987765 55789999999999999999998754
No 101
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.73 E-value=3.5e-17 Score=140.17 Aligned_cols=124 Identities=17% Similarity=0.284 Sum_probs=103.3
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEec
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~ 244 (333)
.++.+|||||||+|.++..+. .+++|+|+++. ++.++.+|+.++++++++||+|++.
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~------------------~~~~~~~d~~~~~~~~~~fD~v~~~ 122 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR-----NPVHCFDLASL------------------DPRVTVCDMAQVPLEDESVDVAVFC 122 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS------------------STTEEESCTTSCSCCTTCEEEEEEE
T ss_pred CCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC------------------CceEEEeccccCCCCCCCEeEEEEe
Confidence 456799999999999988773 38999999886 2457899999998888899999999
Q ss_pred cccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCCcEEEEEEe-C
Q 019957 245 AALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSKVQ-Q 323 (333)
Q Consensus 245 ~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf~~v~~~~~-~ 323 (333)
.++|| .++..+++++.++|+|||.+++.++... +.+.+++..+++++||++++.... .
T Consensus 123 ~~l~~-~~~~~~l~~~~~~L~~gG~l~i~~~~~~--------------------~~~~~~~~~~l~~~Gf~~~~~~~~~~ 181 (215)
T 2zfu_A 123 LSLMG-TNIRDFLEEANRVLKPGGLLKVAEVSSR--------------------FEDVRTFLRAVTKLGFKIVSKDLTNS 181 (215)
T ss_dssp SCCCS-SCHHHHHHHHHHHEEEEEEEEEEECGGG--------------------CSCHHHHHHHHHHTTEEEEEEECCST
T ss_pred hhccc-cCHHHHHHHHHHhCCCCeEEEEEEcCCC--------------------CCCHHHHHHHHHHCCCEEEEEecCCC
Confidence 99965 8999999999999999999999885431 238899999999999999886543 3
Q ss_pred eEEEEEEeC
Q 019957 324 SFIMFAAQK 332 (333)
Q Consensus 324 ~~~~~~a~k 332 (333)
.+.++.++|
T Consensus 182 ~~~~~~~~k 190 (215)
T 2zfu_A 182 HFFLFDFQK 190 (215)
T ss_dssp TCEEEEEEE
T ss_pred eEEEEEEEe
Confidence 456666665
No 102
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.73 E-value=1.2e-18 Score=151.98 Aligned_cols=148 Identities=12% Similarity=0.202 Sum_probs=106.3
Q ss_pred HHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC--CCC
Q 019957 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL--PFA 234 (333)
Q Consensus 157 ~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l--p~~ 234 (333)
.+.+.+. .++.+|||||||+|..+..+++..+ .+++|+|+|+.+++.|+++.... ..++.++.+|+..+ +++
T Consensus 52 ~~a~~~~-~~G~rVLdiG~G~G~~~~~~~~~~~-~~v~~id~~~~~~~~a~~~~~~~----~~~~~~~~~~a~~~~~~~~ 125 (236)
T 3orh_A 52 ALAAAAS-SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQ----THKVIPLKGLWEDVAPTLP 125 (236)
T ss_dssp HHHHHHT-TTCEEEEEECCTTSHHHHHHTTSCE-EEEEEEECCHHHHHHHHHHGGGC----SSEEEEEESCHHHHGGGSC
T ss_pred HHHHhhc-cCCCeEEEECCCccHHHHHHHHhCC-cEEEEEeCCHHHHHHHHHHHhhC----CCceEEEeehHHhhccccc
Confidence 3344433 4678999999999999999988764 48999999999999999988775 34788899988653 466
Q ss_pred CCCcceEEe-----ccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHH
Q 019957 235 SGFVDAVHA-----GAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLC 309 (333)
Q Consensus 235 ~~~fD~V~~-----~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll 309 (333)
+++||.|+. ..+++|+.++..+++++.|+|||||+|++...... ..... ...........+.+...|
T Consensus 126 ~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~~~~-------~~~~~-~~~~~~~~~~~~~~~~~L 197 (236)
T 3orh_A 126 DGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSW-------GELMK-SKYSDITIMFEETQVPAL 197 (236)
T ss_dssp TTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHH-------HHHTT-TTCSCHHHHHHHHTHHHH
T ss_pred ccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEecCCc-------hhhhh-hhhhhhhhhhHHHHHHHH
Confidence 889999874 56678888999999999999999999987542211 00000 000000111235566778
Q ss_pred HhCCCcEEE
Q 019957 310 TSCGLTNYT 318 (333)
Q Consensus 310 ~~aGf~~v~ 318 (333)
.++||+++.
T Consensus 198 ~eaGF~~~~ 206 (236)
T 3orh_A 198 LEAGFRREN 206 (236)
T ss_dssp HHHTCCGGG
T ss_pred HHcCCeEEE
Confidence 899997543
No 103
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.73 E-value=4.9e-17 Score=143.28 Aligned_cols=136 Identities=15% Similarity=0.220 Sum_probs=116.0
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEec
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~ 244 (333)
.++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.++++...+++ . +.++.+|+.+. +++++||+|+++
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~~~---~-v~~~~~d~~~~-~~~~~fD~Vv~n 191 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRNGV---R-PRFLEGSLEAA-LPFGPFDLLVAN 191 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHTTC---C-CEEEESCHHHH-GGGCCEEEEEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHcCC---c-EEEEECChhhc-CcCCCCCEEEEC
Confidence 4578999999999999999999876 999999999999999999888763 3 88999988662 346789999998
Q ss_pred cccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCCcEEEEEEeCe
Q 019957 245 AALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSKVQQS 324 (333)
Q Consensus 245 ~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf~~v~~~~~~~ 324 (333)
...++ ...++.++.++|||||++++...... +.+++.++++++||++++....+.
T Consensus 192 ~~~~~---~~~~l~~~~~~LkpgG~lils~~~~~----------------------~~~~v~~~l~~~Gf~~~~~~~~~~ 246 (254)
T 2nxc_A 192 LYAEL---HAALAPRYREALVPGGRALLTGILKD----------------------RAPLVREAMAGAGFRPLEEAAEGE 246 (254)
T ss_dssp CCHHH---HHHHHHHHHHHEEEEEEEEEEEEEGG----------------------GHHHHHHHHHHTTCEEEEEEEETT
T ss_pred CcHHH---HHHHHHHHHHHcCCCCEEEEEeeccC----------------------CHHHHHHHHHHCCCEEEEEeccCC
Confidence 76554 46789999999999999999875432 357899999999999999999999
Q ss_pred EEEEEEeC
Q 019957 325 FIMFAAQK 332 (333)
Q Consensus 325 ~~~~~a~k 332 (333)
|..++++|
T Consensus 247 W~~l~~~k 254 (254)
T 2nxc_A 247 WVLLAYGR 254 (254)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEEC
Confidence 99988876
No 104
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.73 E-value=4e-17 Score=145.53 Aligned_cols=134 Identities=19% Similarity=0.190 Sum_probs=108.4
Q ss_pred HHHHHhhcccCCCeEEEEcCCcCHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhc-CcCCCCCeEEEEccCCCCCC
Q 019957 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQD-NTILTSNLALVRADVCRLPF 233 (333)
Q Consensus 156 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~-~~~~~~~i~~~~~d~~~lp~ 233 (333)
..+...+...++.+|||+|||+|.++..+++. ++..+++++|+++.+++.+++++... + ..++.++.+|+.+ ++
T Consensus 100 ~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g---~~~v~~~~~d~~~-~~ 175 (275)
T 1yb2_A 100 SYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD---IGNVRTSRSDIAD-FI 175 (275)
T ss_dssp ------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC---CTTEEEECSCTTT-CC
T ss_pred HHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC---CCcEEEEECchhc-cC
Confidence 45566666777889999999999999999987 55679999999999999999998876 5 4689999999987 55
Q ss_pred CCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCC
Q 019957 234 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCG 313 (333)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aG 313 (333)
++++||+|++ |++++..+++++.++|||||++++.++... ..+++.+.++++|
T Consensus 176 ~~~~fD~Vi~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~----------------------~~~~~~~~l~~~G 228 (275)
T 1yb2_A 176 SDQMYDAVIA-----DIPDPWNHVQKIASMMKPGSVATFYLPNFD----------------------QSEKTVLSLSASG 228 (275)
T ss_dssp CSCCEEEEEE-----CCSCGGGSHHHHHHTEEEEEEEEEEESSHH----------------------HHHHHHHHSGGGT
T ss_pred cCCCccEEEE-----cCcCHHHHHHHHHHHcCCCCEEEEEeCCHH----------------------HHHHHHHHHHHCC
Confidence 6778999998 678889999999999999999999885431 1356777888899
Q ss_pred CcEEEEE
Q 019957 314 LTNYTSK 320 (333)
Q Consensus 314 f~~v~~~ 320 (333)
|+.++..
T Consensus 229 f~~~~~~ 235 (275)
T 1yb2_A 229 MHHLETV 235 (275)
T ss_dssp EEEEEEE
T ss_pred CeEEEEE
Confidence 9887754
No 105
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.73 E-value=8.1e-17 Score=134.76 Aligned_cols=136 Identities=18% Similarity=0.188 Sum_probs=110.9
Q ss_pred cHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC
Q 019957 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (333)
Q Consensus 151 ~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (333)
.......+.+.+...++.+|||+|||+|.++..+++.+ .+++++|+++.+++.+++++...+. ..++.++.+|+.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~ 93 (192)
T 1l3i_A 18 AMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGL--GDNVTLMEGDAPE 93 (192)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTC--CTTEEEEESCHHH
T ss_pred hHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCC--CcceEEEecCHHH
Confidence 34455666777777778899999999999999999887 4999999999999999999887663 3689999999866
Q ss_pred CCCCC-CCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHH
Q 019957 231 LPFAS-GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLC 309 (333)
Q Consensus 231 lp~~~-~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll 309 (333)
++++ ++||+|++..+++| ...+++++.++|+|||.+++.++... +..++..++
T Consensus 94 -~~~~~~~~D~v~~~~~~~~---~~~~l~~~~~~l~~gG~l~~~~~~~~----------------------~~~~~~~~l 147 (192)
T 1l3i_A 94 -ALCKIPDIDIAVVGGSGGE---LQEILRIIKDKLKPGGRIIVTAILLE----------------------TKFEAMECL 147 (192)
T ss_dssp -HHTTSCCEEEEEESCCTTC---HHHHHHHHHHTEEEEEEEEEEECBHH----------------------HHHHHHHHH
T ss_pred -hcccCCCCCEEEECCchHH---HHHHHHHHHHhcCCCcEEEEEecCcc----------------------hHHHHHHHH
Confidence 2222 58999999988764 58889999999999999999875421 235788999
Q ss_pred HhCCCcE
Q 019957 310 TSCGLTN 316 (333)
Q Consensus 310 ~~aGf~~ 316 (333)
++.||.+
T Consensus 148 ~~~g~~~ 154 (192)
T 1l3i_A 148 RDLGFDV 154 (192)
T ss_dssp HHTTCCC
T ss_pred HHCCCce
Confidence 9999954
No 106
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.73 E-value=5.6e-17 Score=149.98 Aligned_cols=154 Identities=17% Similarity=0.145 Sum_probs=118.2
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEec
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~ 244 (333)
.+..+|||||||+|.++..+++.++..+++++|+ +.+++.+++ ..++.++.+|+.+ +++ .||+|++.
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~~--~~D~v~~~ 258 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG---------NENLNFVGGDMFK-SIP--SADAVLLK 258 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC---------CSSEEEEECCTTT-CCC--CCSEEEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc---------CCCcEEEeCccCC-CCC--CceEEEEc
Confidence 3567999999999999999999988889999999 788766653 3469999999987 655 49999999
Q ss_pred cccccCCChH--HHHHHHHHhccC---CcEEEEEEecccCCCcc----hhhHHHHH--hhhccCCCCCHHHHHHHHHhCC
Q 019957 245 AALHCWPSPS--NAVAEISRILRS---GGVFVGTTFLRYTSSTS----LTGRVLRE--RILQNYNYLTEEEIEDLCTSCG 313 (333)
Q Consensus 245 ~vl~h~~d~~--~~l~~~~r~Lkp---gG~l~i~~~~~~~~~~~----~~~~~~~~--~~~~~~~~~t~~~l~~ll~~aG 313 (333)
.+|||++++. ++|++++++||| ||++++.++........ .....+.- ........++.++|.++++++|
T Consensus 259 ~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aG 338 (358)
T 1zg3_A 259 WVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAG 338 (358)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTT
T ss_pred ccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcC
Confidence 9999999987 999999999999 99999988765432211 11111111 0112345679999999999999
Q ss_pred CcEEEEEEeCeE-EEEEEe
Q 019957 314 LTNYTSKVQQSF-IMFAAQ 331 (333)
Q Consensus 314 f~~v~~~~~~~~-~~~~a~ 331 (333)
|+++++.....+ .++.++
T Consensus 339 f~~~~~~~~~~~~~vie~~ 357 (358)
T 1zg3_A 339 FSSYKITPISGFKSLIEVY 357 (358)
T ss_dssp CCEEEEEEETTTEEEEEEE
T ss_pred CCeeEEEecCCCcEEEEEe
Confidence 999987664443 455444
No 107
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.73 E-value=3.9e-18 Score=148.50 Aligned_cols=139 Identities=14% Similarity=0.254 Sum_probs=100.7
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC--CCCCCCcceEE
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL--PFASGFVDAVH 242 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l--p~~~~~fD~V~ 242 (333)
.++.+|||||||+|.++..+++.+ ..+++|+|+|+.+++.|+++.... ..++.++.+|+.++ ++++++||+|+
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~fD~V~ 133 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAPRQ----THKVIPLKGLWEDVAPTLPDGHFDGIL 133 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSC-EEEEEEEECCHHHHHHHHHHGGGC----SSEEEEEESCHHHHGGGSCTTCEEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHhcC-CCeEEEEcCCHHHHHHHHHHHHhc----CCCeEEEecCHHHhhcccCCCceEEEE
Confidence 457799999999999999997754 348999999999999999987664 35799999999887 78889999999
Q ss_pred e-cccc--c--cCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCCcE
Q 019957 243 A-GAAL--H--CWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTN 316 (333)
Q Consensus 243 ~-~~vl--~--h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf~~ 316 (333)
+ ...+ + |..+...++++++++|||||+|++.+.... ........ ........++....+.++||+.
T Consensus 134 ~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~-------~~~~~~~~-~~~~~~~~~~~~~~l~~aGF~~ 204 (236)
T 1zx0_A 134 YDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSW-------GELMKSKY-SDITIMFEETQVPALLEAGFRR 204 (236)
T ss_dssp ECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHH-------HHHTTTTC-SCHHHHHHHHTHHHHHHTTCCG
T ss_pred ECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecCcH-------HHhhchhh-hhhhhhccHHHHHHHHHCCCCC
Confidence 9 5543 1 222334779999999999999998764421 00000000 0011111345567888999984
No 108
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.73 E-value=1.2e-16 Score=137.92 Aligned_cols=149 Identities=14% Similarity=0.125 Sum_probs=111.3
Q ss_pred hcccCCCeEEEEcCCcCHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC---CCCCCCC
Q 019957 162 FKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR---LPFASGF 237 (333)
Q Consensus 162 l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~---lp~~~~~ 237 (333)
+...++.+|||+|||+|.++..+++. ++...|+|+|+++.|++.++++... ..++..+.+|... .++..++
T Consensus 73 l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~-----~~ni~~V~~d~~~p~~~~~~~~~ 147 (233)
T 4df3_A 73 LPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD-----RRNIFPILGDARFPEKYRHLVEG 147 (233)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT-----CTTEEEEESCTTCGGGGTTTCCC
T ss_pred cCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh-----hcCeeEEEEeccCccccccccce
Confidence 45678999999999999999999987 7888999999999999999988765 4589999998865 3456788
Q ss_pred cceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCCcEE
Q 019957 238 VDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNY 317 (333)
Q Consensus 238 fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf~~v 317 (333)
+|+|++. +.|..++..++.++.++|||||.+++....... ....+. .. ...+..+.|+++||+.+
T Consensus 148 vDvVf~d--~~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~----------d~~~p~-~~--~~~~ev~~L~~~GF~l~ 212 (233)
T 4df3_A 148 VDGLYAD--VAQPEQAAIVVRNARFFLRDGGYMLMAIKARSI----------DVTTEP-SE--VYKREIKTLMDGGLEIK 212 (233)
T ss_dssp EEEEEEC--CCCTTHHHHHHHHHHHHEEEEEEEEEEEECCHH----------HHHTCC-CH--HHHHHHHHHHHTTCCEE
T ss_pred EEEEEEe--ccCChhHHHHHHHHHHhccCCCEEEEEEecccC----------CCCCCh-HH--HHHHHHHHHHHCCCEEE
Confidence 9999863 455567788999999999999999987643310 000000 00 11344567889999998
Q ss_pred EEEEeCe----EEEEEE
Q 019957 318 TSKVQQS----FIMFAA 330 (333)
Q Consensus 318 ~~~~~~~----~~~~~a 330 (333)
+...... .+++++
T Consensus 213 e~i~L~pf~~~H~lv~~ 229 (233)
T 4df3_A 213 DVVHLDPFDRDHAMIYA 229 (233)
T ss_dssp EEEECTTTSTTEEEEEE
T ss_pred EEEccCCCCCceEEEEE
Confidence 8765444 355554
No 109
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.73 E-value=1.1e-16 Score=137.10 Aligned_cols=107 Identities=21% Similarity=0.244 Sum_probs=92.2
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC--CCCCCcceEEe
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--FASGFVDAVHA 243 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp--~~~~~fD~V~~ 243 (333)
++.+|||||||+|.++..+++..+..+++|+|+++.+++.|++++...+ ..++.++.+|+..++ +++++||+|++
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~---~~~v~~~~~d~~~~~~~~~~~~~D~i~~ 117 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVG---VPNIKLLWVDGSDLTDYFEDGEIDRLYL 117 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHC---CSSEEEEECCSSCGGGTSCTTCCSEEEE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcC---CCCEEEEeCCHHHHHhhcCCCCCCEEEE
Confidence 4679999999999999999999887899999999999999999988776 468999999998876 67789999999
Q ss_pred ccccccCC--------ChHHHHHHHHHhccCCcEEEEEEe
Q 019957 244 GAALHCWP--------SPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 244 ~~vl~h~~--------d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
.....+.. ....+++++.++|||||.+++.+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 118 NFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp ESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred ECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 86543322 125789999999999999999774
No 110
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.72 E-value=1.6e-16 Score=138.76 Aligned_cols=129 Identities=15% Similarity=0.025 Sum_probs=105.2
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCC---CCCcceE
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA---SGFVDAV 241 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~---~~~fD~V 241 (333)
.++.+|||||||+|.++..++...+..+|+|+|+|+.+++.++++....+ ..++.++++|+.++++. +++||+|
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~~~~~~~~~~fD~V 145 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQ---LENTTFCHDRAETFGQRKDVRESYDIV 145 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHT---CSSEEEEESCHHHHTTCTTTTTCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC---CCCEEEEeccHHHhcccccccCCccEE
Confidence 35779999999999999999977667799999999999999999988876 34799999999887653 5799999
Q ss_pred EeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCCcEEEEE
Q 019957 242 HAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSK 320 (333)
Q Consensus 242 ~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf~~v~~~ 320 (333)
++.. +.++..+++++.++|||||.+++...... .. ..+++...++++||++++..
T Consensus 146 ~~~~----~~~~~~~l~~~~~~LkpgG~l~~~~g~~~-------~~-------------~~~~~~~~l~~~g~~~~~~~ 200 (240)
T 1xdz_A 146 TARA----VARLSVLSELCLPLVKKNGLFVALKAASA-------EE-------------ELNAGKKAITTLGGELENIH 200 (240)
T ss_dssp EEEC----CSCHHHHHHHHGGGEEEEEEEEEEECC-C-------HH-------------HHHHHHHHHHHTTEEEEEEE
T ss_pred EEec----cCCHHHHHHHHHHhcCCCCEEEEEeCCCc-------hH-------------HHHHHHHHHHHcCCeEeEEE
Confidence 9976 46789999999999999999988642110 00 12467788999999887753
No 111
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.72 E-value=3.4e-16 Score=129.34 Aligned_cols=129 Identities=16% Similarity=0.150 Sum_probs=104.5
Q ss_pred HHHHHHHhhcc--cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC
Q 019957 154 EFKMAQEYFKS--AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (333)
Q Consensus 154 ~~~~~~~~l~~--~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (333)
..+.+.+.+.. .++.+|||+|||+|.++..+++.+ +++|+|+|+.+++. ..++.++++|+.+
T Consensus 9 ~~~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~------------~~~~~~~~~d~~~- 72 (170)
T 3q87_B 9 DTYTLMDALEREGLEMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES------------HRGGNLVRADLLC- 72 (170)
T ss_dssp HHHHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT------------CSSSCEEECSTTT-
T ss_pred cHHHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc------------ccCCeEEECChhh-
Confidence 34445555544 567799999999999999999886 99999999999876 1257899999987
Q ss_pred CCCCCCcceEEeccccccCCCh---------HHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCH
Q 019957 232 PFASGFVDAVHAGAALHCWPSP---------SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTE 302 (333)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~---------~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 302 (333)
++.+++||+|+++..+++..+. ..+++++.+.| |||.+++.++.. .+.
T Consensus 73 ~~~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~----------------------~~~ 129 (170)
T 3q87_B 73 SINQESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA----------------------NRP 129 (170)
T ss_dssp TBCGGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG----------------------GCH
T ss_pred hcccCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC----------------------CCH
Confidence 5566899999999988877665 57889999999 999999988543 245
Q ss_pred HHHHHHHHhCCCcEEEEEE
Q 019957 303 EEIEDLCTSCGLTNYTSKV 321 (333)
Q Consensus 303 ~~l~~ll~~aGf~~v~~~~ 321 (333)
+++.++++++||+.+....
T Consensus 130 ~~l~~~l~~~gf~~~~~~~ 148 (170)
T 3q87_B 130 KEVLARLEERGYGTRILKV 148 (170)
T ss_dssp HHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHCCCcEEEEEe
Confidence 7899999999999877543
No 112
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.72 E-value=4.5e-16 Score=129.27 Aligned_cols=135 Identities=16% Similarity=0.177 Sum_probs=111.8
Q ss_pred CcHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCC
Q 019957 150 GPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVC 229 (333)
Q Consensus 150 ~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~ 229 (333)
......+.+.+.+...++.+|||+|||+|.++..+++ +..+++|+|+++.+++.+++++...+ ..++.++.+|+.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~~~~~~d~~ 93 (183)
T 2yxd_A 19 TKEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFN---IKNCQIIKGRAE 93 (183)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTT---CCSEEEEESCHH
T ss_pred CHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcC---CCcEEEEECCcc
Confidence 3445556777777777788999999999999999998 35699999999999999999988876 367999999997
Q ss_pred CCCCCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHH
Q 019957 230 RLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLC 309 (333)
Q Consensus 230 ~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll 309 (333)
+ ++++++||+|++..+ .++..+++++.++ |||.+++.++... +..++.+.+
T Consensus 94 ~-~~~~~~~D~i~~~~~----~~~~~~l~~~~~~--~gG~l~~~~~~~~----------------------~~~~~~~~l 144 (183)
T 2yxd_A 94 D-VLDKLEFNKAFIGGT----KNIEKIIEILDKK--KINHIVANTIVLE----------------------NAAKIINEF 144 (183)
T ss_dssp H-HGGGCCCSEEEECSC----SCHHHHHHHHHHT--TCCEEEEEESCHH----------------------HHHHHHHHH
T ss_pred c-cccCCCCcEEEECCc----ccHHHHHHHHhhC--CCCEEEEEecccc----------------------cHHHHHHHH
Confidence 7 666689999999988 6788899999998 9999999885432 135788999
Q ss_pred HhCCCcEEE
Q 019957 310 TSCGLTNYT 318 (333)
Q Consensus 310 ~~aGf~~v~ 318 (333)
+++||.+..
T Consensus 145 ~~~g~~~~~ 153 (183)
T 2yxd_A 145 ESRGYNVDA 153 (183)
T ss_dssp HHTTCEEEE
T ss_pred HHcCCeEEE
Confidence 999987654
No 113
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.72 E-value=8.3e-17 Score=139.18 Aligned_cols=117 Identities=14% Similarity=0.227 Sum_probs=99.5
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccC-CCCCCC-CCCcceEE
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV-CRLPFA-SGFVDAVH 242 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~-~~lp~~-~~~fD~V~ 242 (333)
.++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.++++ .+++.++++|+ ..+|+. +++||+|+
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~~~~~~~fD~v~ 116 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAA--RWAAYDFSPELLKLARAN--------APHADVYEWNGKGELPAGLGAPFGLIV 116 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHH--------CTTSEEEECCSCSSCCTTCCCCEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHh--------CCCceEEEcchhhccCCcCCCCEEEEE
Confidence 4578999999999999999999854 999999999999999987 45799999999 678887 88999999
Q ss_pred eccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCCcEEEEE
Q 019957 243 AGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSK 320 (333)
Q Consensus 243 ~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf~~v~~~ 320 (333)
+. .++..+++++.++|||||.++ .+ ....+.+++..+++++||+++...
T Consensus 117 ~~------~~~~~~l~~~~~~LkpgG~l~--~~---------------------~~~~~~~~~~~~l~~~Gf~~~~~~ 165 (226)
T 3m33_A 117 SR------RGPTSVILRLPELAAPDAHFL--YV---------------------GPRLNVPEVPERLAAVGWDIVAED 165 (226)
T ss_dssp EE------SCCSGGGGGHHHHEEEEEEEE--EE---------------------ESSSCCTHHHHHHHHTTCEEEEEE
T ss_pred eC------CCHHHHHHHHHHHcCCCcEEE--Ee---------------------CCcCCHHHHHHHHHHCCCeEEEEE
Confidence 87 467788999999999999999 11 113456789999999999987743
No 114
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.71 E-value=1.1e-16 Score=142.20 Aligned_cols=138 Identities=11% Similarity=0.025 Sum_probs=106.1
Q ss_pred chhHHHHhhHHhhcccC--------CCCCcHHHHH---HHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeC
Q 019957 130 FVSFLYERGWRQNFNRS--------GFPGPDEEFK---MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDF 198 (333)
Q Consensus 130 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~~---~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~ 198 (333)
.....++..|-+.+... .++..+.... .-...+...++.+|||||||+|.++..+..+.++.+|+|+|+
T Consensus 75 ~~~~~~E~~wa~~l~~~~~p~~~l~~fpy~~~~~~l~~~E~~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDi 154 (298)
T 3fpf_A 75 NLGMKLEMEKAQEVIESDSPWETLRSFYFYPRYLELLKNEAALGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEI 154 (298)
T ss_dssp HHHHHHHHHHHHHHHHCSSHHHHHHTSTTHHHHHHHHHHHHHHTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEES
T ss_pred HHHHHHHHHHHHHHhccCChHHhhccCCCcccHHHHHHHHHHHcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEEC
Confidence 34456777888876332 2333333222 222345667889999999999977655444444679999999
Q ss_pred CHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 199 SENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 199 s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
|+.+++.|+++++..| ..++.++++|+.+++ +++||+|++... .+++.++++++.++|||||+|++...
T Consensus 155 s~~~l~~Ar~~~~~~g---l~~v~~v~gDa~~l~--d~~FDvV~~~a~---~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 155 EPDIAELSRKVIEGLG---VDGVNVITGDETVID--GLEFDVLMVAAL---AEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp SHHHHHHHHHHHHHHT---CCSEEEEESCGGGGG--GCCCSEEEECTT---CSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHhcC---CCCeEEEECchhhCC--CCCcCEEEECCC---ccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 9999999999998877 468999999998876 789999998654 57889999999999999999999774
No 115
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.71 E-value=5.3e-17 Score=134.79 Aligned_cols=116 Identities=17% Similarity=0.166 Sum_probs=96.3
Q ss_pred cccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCC---CCCCcc
Q 019957 163 KSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF---ASGFVD 239 (333)
Q Consensus 163 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~---~~~~fD 239 (333)
...++.+|||||||. +++|+|+.|++.|+++.. .++.++++|+.++++ ++++||
T Consensus 9 g~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~-------~~~~~~~~d~~~~~~~~~~~~~fD 65 (176)
T 2ld4_A 9 GISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTG-------NEGRVSVENIKQLLQSAHKESSFD 65 (176)
T ss_dssp TCCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTT-------TTSEEEEEEGGGGGGGCCCSSCEE
T ss_pred CCCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhcc-------cCcEEEEechhcCccccCCCCCEe
Confidence 445688999999986 239999999999998742 258999999999887 788999
Q ss_pred eEEeccccccC-CChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCC
Q 019957 240 AVHAGAALHCW-PSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGL 314 (333)
Q Consensus 240 ~V~~~~vl~h~-~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf 314 (333)
+|++..++||+ +++..++++++++|||||+|++..+...... ......+.+++..+++++||
T Consensus 66 ~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~-------------~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 66 IILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVD-------------NNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp EEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSC-------------SSSSSCCHHHHHHHHHHTTC
T ss_pred EEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEcccccccc-------------cccccCCHHHHHHHHHHCCC
Confidence 99999999999 9999999999999999999999765432100 12334688999999999999
No 116
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.71 E-value=3.3e-16 Score=139.57 Aligned_cols=152 Identities=12% Similarity=0.121 Sum_probs=117.0
Q ss_pred HHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC
Q 019957 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP 232 (333)
Q Consensus 153 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp 232 (333)
..++.+.+.+. .++.+|||+|||+|.++..++...+..+++|+|+|+.+++.++++....+ ..++.++.+|+.+.
T Consensus 97 ~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~---~~~v~~~~~d~~~~- 171 (276)
T 2b3t_A 97 CLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLA---IKNIHILQSDWFSA- 171 (276)
T ss_dssp HHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHT---CCSEEEECCSTTGG-
T ss_pred HHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC---CCceEEEEcchhhh-
Confidence 34455555554 45679999999999999999988777799999999999999999988876 34799999999763
Q ss_pred CCCCCcceEEec-------------cccccCC------------ChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhH
Q 019957 233 FASGFVDAVHAG-------------AALHCWP------------SPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGR 287 (333)
Q Consensus 233 ~~~~~fD~V~~~-------------~vl~h~~------------d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~ 287 (333)
+.+++||+|+++ .+++|.+ +...+++++.++|||||++++...
T Consensus 172 ~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~------------ 239 (276)
T 2b3t_A 172 LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG------------ 239 (276)
T ss_dssp GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC------------
T ss_pred cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC------------
Confidence 336789999997 4555543 336789999999999999998642
Q ss_pred HHHHhhhccCCCCCHHHHHHHHHhCCCcEEEEEE--eCeEEEEEEeC
Q 019957 288 VLRERILQNYNYLTEEEIEDLCTSCGLTNYTSKV--QQSFIMFAAQK 332 (333)
Q Consensus 288 ~~~~~~~~~~~~~t~~~l~~ll~~aGf~~v~~~~--~~~~~~~~a~k 332 (333)
+.+.+++.++++++||+.++... .+.--++.++|
T Consensus 240 -----------~~~~~~~~~~l~~~Gf~~v~~~~d~~g~~r~~~~~~ 275 (276)
T 2b3t_A 240 -----------WQQGEAVRQAFILAGYHDVETCRDYGDNERVTLGRY 275 (276)
T ss_dssp -----------SSCHHHHHHHHHHTTCTTCCEEECTTSSEEEEEEEC
T ss_pred -----------chHHHHHHHHHHHCCCcEEEEEecCCCCCcEEEEEE
Confidence 23567899999999998765432 33444555554
No 117
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.71 E-value=2.4e-16 Score=138.69 Aligned_cols=142 Identities=13% Similarity=0.067 Sum_probs=116.8
Q ss_pred CCcHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhc-CcCCCCCeEEEEc
Q 019957 149 PGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQD-NTILTSNLALVRA 226 (333)
Q Consensus 149 ~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~-~~~~~~~i~~~~~ 226 (333)
.........+...+...++.+|||+|||+|.++..+++. ++..+++++|+++.+++.+++++... + ..++.++.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g---~~~v~~~~~ 155 (258)
T 2pwy_A 79 PTYPKDASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ---VENVRFHLG 155 (258)
T ss_dssp CCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC---CCCEEEEES
T ss_pred cccchHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC---CCCEEEEEC
Confidence 334445566777777778889999999999999999998 66679999999999999999998776 5 468999999
Q ss_pred cCCCCCCCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHH
Q 019957 227 DVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIE 306 (333)
Q Consensus 227 d~~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~ 306 (333)
|+.+.++++++||+|++ +.+++..+++++.++|||||.+++.++... ...++.
T Consensus 156 d~~~~~~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~----------------------~~~~~~ 208 (258)
T 2pwy_A 156 KLEEAELEEAAYDGVAL-----DLMEPWKVLEKAALALKPDRFLVAYLPNIT----------------------QVLELV 208 (258)
T ss_dssp CGGGCCCCTTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESCHH----------------------HHHHHH
T ss_pred chhhcCCCCCCcCEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCCHH----------------------HHHHHH
Confidence 99888777789999997 467888999999999999999999885431 124667
Q ss_pred HHHHhCCCcEEEEE
Q 019957 307 DLCTSCGLTNYTSK 320 (333)
Q Consensus 307 ~ll~~aGf~~v~~~ 320 (333)
..++++||..++..
T Consensus 209 ~~l~~~gf~~~~~~ 222 (258)
T 2pwy_A 209 RAAEAHPFRLERVL 222 (258)
T ss_dssp HHHTTTTEEEEEEE
T ss_pred HHHHHCCCceEEEE
Confidence 77888999876643
No 118
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.71 E-value=2.9e-16 Score=134.28 Aligned_cols=144 Identities=13% Similarity=0.066 Sum_probs=101.8
Q ss_pred cccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC----CCCCCCc
Q 019957 163 KSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL----PFASGFV 238 (333)
Q Consensus 163 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l----p~~~~~f 238 (333)
...++.+|||+|||+|.++..+++..+..+|+|+|+|+.+++.+.+..+. ..++.++.+|+... ++. ++|
T Consensus 54 ~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~-----~~~v~~~~~d~~~~~~~~~~~-~~f 127 (210)
T 1nt2_A 54 KLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE-----RNNIIPLLFDASKPWKYSGIV-EKV 127 (210)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH-----CSSEEEECSCTTCGGGTTTTC-CCE
T ss_pred CCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc-----CCCeEEEEcCCCCchhhcccc-cce
Confidence 34567899999999999999999886456999999999988766665544 34788888998763 444 789
Q ss_pred ceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHH----HHHHhCCC
Q 019957 239 DAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIE----DLCTSCGL 314 (333)
Q Consensus 239 D~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~----~ll~~aGf 314 (333)
|+|++.. .++ .+...+++++.++|||||+|++...... .....+.+++. +.++++ |
T Consensus 128 D~V~~~~-~~~-~~~~~~l~~~~r~LkpgG~l~i~~~~~~-----------------~~~~~~~~~~~~~~~~~l~~~-f 187 (210)
T 1nt2_A 128 DLIYQDI-AQK-NQIEILKANAEFFLKEKGEVVIMVKARS-----------------IDSTAEPEEVFKSVLKEMEGD-F 187 (210)
T ss_dssp EEEEECC-CST-THHHHHHHHHHHHEEEEEEEEEEEEHHH-----------------HCTTSCHHHHHHHHHHHHHTT-S
T ss_pred eEEEEec-cCh-hHHHHHHHHHHHHhCCCCEEEEEEecCC-----------------ccccCCHHHHHHHHHHHHHhh-c
Confidence 9999872 222 2233458999999999999999864321 01112344432 237888 9
Q ss_pred cEEEEEEeCe----EEEEEEeC
Q 019957 315 TNYTSKVQQS----FIMFAAQK 332 (333)
Q Consensus 315 ~~v~~~~~~~----~~~~~a~k 332 (333)
++++...... .++++++|
T Consensus 188 ~~~~~~~~~p~~~~h~~~~~~~ 209 (210)
T 1nt2_A 188 KIVKHGSLMPYHRDHIFIHAYR 209 (210)
T ss_dssp EEEEEEECTTTCTTEEEEEEEE
T ss_pred EEeeeecCCCCCCCcEEEEEEc
Confidence 9998766533 25666654
No 119
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.71 E-value=2.2e-16 Score=138.79 Aligned_cols=141 Identities=18% Similarity=0.261 Sum_probs=116.1
Q ss_pred CCcHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEcc
Q 019957 149 PGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRAD 227 (333)
Q Consensus 149 ~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d 227 (333)
.........+...+...++.+|||+|||+|.++..+++. ++..+++++|+++.+++.|+++++..++ ..++.++.+|
T Consensus 76 ~~~~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~v~~~~~d 153 (255)
T 3mb5_A 76 IVHPKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGF--DDRVTIKLKD 153 (255)
T ss_dssp CCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTC--TTTEEEECSC
T ss_pred cccHhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCC--CCceEEEECc
Confidence 334455567777787788899999999999999999998 7777999999999999999999988774 3459999999
Q ss_pred CCCCCCCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHH
Q 019957 228 VCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIED 307 (333)
Q Consensus 228 ~~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ 307 (333)
+.+. +++++||+|++ +.+++..+++++.++|||||++++..+... ..+++.+
T Consensus 154 ~~~~-~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~----------------------~~~~~~~ 205 (255)
T 3mb5_A 154 IYEG-IEEENVDHVIL-----DLPQPERVVEHAAKALKPGGFFVAYTPCSN----------------------QVMRLHE 205 (255)
T ss_dssp GGGC-CCCCSEEEEEE-----CSSCGGGGHHHHHHHEEEEEEEEEEESSHH----------------------HHHHHHH
T ss_pred hhhc-cCCCCcCEEEE-----CCCCHHHHHHHHHHHcCCCCEEEEEECCHH----------------------HHHHHHH
Confidence 9864 56778999997 567888899999999999999999875431 1356778
Q ss_pred HHHhCC--CcEEEE
Q 019957 308 LCTSCG--LTNYTS 319 (333)
Q Consensus 308 ll~~aG--f~~v~~ 319 (333)
.++++| |..++.
T Consensus 206 ~l~~~g~~f~~~~~ 219 (255)
T 3mb5_A 206 KLREFKDYFMKPRT 219 (255)
T ss_dssp HHHHTGGGBSCCEE
T ss_pred HHHHcCCCccccEE
Confidence 889999 876654
No 120
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.70 E-value=1.5e-16 Score=136.39 Aligned_cols=108 Identities=18% Similarity=0.220 Sum_probs=91.0
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC--CCCCCcceEEe
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--FASGFVDAVHA 243 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp--~~~~~fD~V~~ 243 (333)
++.+|||||||+|.++..+++..+..+++|+|+|+.+++.|++++...+ ..++.++.+|+..++ +++++||.|++
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~---~~nv~~~~~d~~~l~~~~~~~~~d~v~~ 114 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSE---AQNVKLLNIDADTLTDVFEPGEVKRVYL 114 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSC---CSSEEEECCCGGGHHHHCCTTSCCEEEE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcC---CCCEEEEeCCHHHHHhhcCcCCcCEEEE
Confidence 4679999999999999999999888899999999999999999988876 468999999998865 66789999987
Q ss_pred ccccccCCC--------hHHHHHHHHHhccCCcEEEEEEec
Q 019957 244 GAALHCWPS--------PSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 244 ~~vl~h~~d--------~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
.....+... ...+++++.++|||||.|++.+..
T Consensus 115 ~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~ 155 (213)
T 2fca_A 115 NFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDN 155 (213)
T ss_dssp ESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESC
T ss_pred ECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCC
Confidence 654332221 257899999999999999998743
No 121
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.70 E-value=2e-17 Score=143.03 Aligned_cols=150 Identities=15% Similarity=0.162 Sum_probs=97.9
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCC-HHHHHHH---HHHHHhcCcCCCCCeEEEEccCCCCCCC-CCCcc
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFS-ENMLRQC---YDFIKQDNTILTSNLALVRADVCRLPFA-SGFVD 239 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s-~~~~~~a---~~~~~~~~~~~~~~i~~~~~d~~~lp~~-~~~fD 239 (333)
.++.+|||||||+|.++..+++..+..+|+|+|+| +.+++.| +++....+ ..++.++.+|+..+|.. .+.+|
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~---~~~v~~~~~d~~~l~~~~~d~v~ 99 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGG---LSNVVFVIAAAESLPFELKNIAD 99 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTC---CSSEEEECCBTTBCCGGGTTCEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcC---CCCeEEEEcCHHHhhhhccCeEE
Confidence 45679999999999999999987777799999999 6676666 76666655 46899999999998632 13344
Q ss_pred eEEecccc----cc-CCChHHHHHHHHHhccCCcEEEEEEecccC-CCcchhhHHHHHhhhc-cCCCCCHHHHHHHHHhC
Q 019957 240 AVHAGAAL----HC-WPSPSNAVAEISRILRSGGVFVGTTFLRYT-SSTSLTGRVLRERILQ-NYNYLTEEEIEDLCTSC 312 (333)
Q Consensus 240 ~V~~~~vl----~h-~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~t~~~l~~ll~~a 312 (333)
.|.+.... +| ..++..++++++++|||||++++....... ...+. .. ...+. ...++..+++..+++++
T Consensus 100 ~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~el~~~l~~a 175 (225)
T 3p2e_A 100 SISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEI---KK-RGLPLLSKAYFLSEQYKAELSNS 175 (225)
T ss_dssp EEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC------------------CCHHHHHSHHHHHHHHHH
T ss_pred EEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchh---hh-cCCCCCChhhcchHHHHHHHHHc
Confidence 44443321 11 134467899999999999999994433221 00010 00 01110 00112223599999999
Q ss_pred CCcEEEEEE
Q 019957 313 GLTNYTSKV 321 (333)
Q Consensus 313 Gf~~v~~~~ 321 (333)
||++.....
T Consensus 176 Gf~v~~~~~ 184 (225)
T 3p2e_A 176 GFRIDDVKE 184 (225)
T ss_dssp TCEEEEEEE
T ss_pred CCCeeeeee
Confidence 999887543
No 122
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.70 E-value=1.1e-15 Score=132.21 Aligned_cols=132 Identities=16% Similarity=0.148 Sum_probs=104.8
Q ss_pred ccCCCeEEEEcCC-cCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC-CCCCCCcceE
Q 019957 164 SAQGGLLVDVSCG-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-PFASGFVDAV 241 (333)
Q Consensus 164 ~~~~~~vLDiGcG-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-p~~~~~fD~V 241 (333)
..++.+|||+||| +|.++..+++.. ..+|+|+|+++.+++.+++++...+ . ++.++.+|+..+ ++.+++||+|
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~---~-~v~~~~~d~~~~~~~~~~~fD~I 127 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNN---S-NVRLVKSNGGIIKGVVEGTFDVI 127 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTT---C-CCEEEECSSCSSTTTCCSCEEEE
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhC---C-CcEEEeCCchhhhhcccCceeEE
Confidence 3467899999999 999999999884 4499999999999999999998875 3 899999997543 3456899999
Q ss_pred EeccccccCCC-------------------hHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCH
Q 019957 242 HAGAALHCWPS-------------------PSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTE 302 (333)
Q Consensus 242 ~~~~vl~h~~d-------------------~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 302 (333)
+++-.+++..+ ...+++++.++|||||++++..+... ...
T Consensus 128 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---------------------~~~ 186 (230)
T 3evz_A 128 FSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE---------------------KLL 186 (230)
T ss_dssp EECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH---------------------HHH
T ss_pred EECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH---------------------hHH
Confidence 99866655433 36789999999999999999875431 123
Q ss_pred HHHHHHHHhCCCcEEEEEE
Q 019957 303 EEIEDLCTSCGLTNYTSKV 321 (333)
Q Consensus 303 ~~l~~ll~~aGf~~v~~~~ 321 (333)
+++.++++++||++.....
T Consensus 187 ~~~~~~l~~~g~~~~~~~~ 205 (230)
T 3evz_A 187 NVIKERGIKLGYSVKDIKF 205 (230)
T ss_dssp HHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHcCCceEEEEe
Confidence 6888999999997766543
No 123
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.70 E-value=2.1e-16 Score=143.36 Aligned_cols=154 Identities=16% Similarity=0.203 Sum_probs=113.2
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCc----CCCCCeEEEEccCCCCC----CC--C
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNT----ILTSNLALVRADVCRLP----FA--S 235 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~----~~~~~i~~~~~d~~~lp----~~--~ 235 (333)
++.+|||+|||+|.++..+.+.. ..+++|+|+|+.+++.++++....+. ....++.++++|+..++ +. +
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGR-INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCEEEEECCCCcHHHHHHHhcC-CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 56799999999999999998753 56999999999999999998765310 00347899999998875 53 4
Q ss_pred CCcceEEeccccccC-C---ChHHHHHHHHHhccCCcEEEEEEecccCC--------CcchhhHH-----HH--------
Q 019957 236 GFVDAVHAGAALHCW-P---SPSNAVAEISRILRSGGVFVGTTFLRYTS--------STSLTGRV-----LR-------- 290 (333)
Q Consensus 236 ~~fD~V~~~~vl~h~-~---d~~~~l~~~~r~LkpgG~l~i~~~~~~~~--------~~~~~~~~-----~~-------- 290 (333)
++||+|++..++||+ . ++..+++++.++|||||.+++.+++.... ...+ +.. +.
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~f~~~~~~~~~ 191 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFELIRRLEASETESF-GNEIYTVKFQKKGDYPLF 191 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHHHHTTSSSSEE-ECSSEEEEESCSSCCCSS
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHHHHHHHHhhccCcc-CCeeEEEEeCCCCCCCCc
Confidence 589999999999988 4 34689999999999999999999864200 0000 000 00
Q ss_pred ---------HhhhccCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019957 291 ---------ERILQNYNYLTEEEIEDLCTSCGLTNYTSKV 321 (333)
Q Consensus 291 ---------~~~~~~~~~~t~~~l~~ll~~aGf~~v~~~~ 321 (333)
..........+.+++..++++.||+++....
T Consensus 192 ~~~~~f~l~~~~~~~~~~~~~~~~~~l~~~~G~~~v~~~~ 231 (313)
T 3bgv_A 192 GCKYDFNLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKT 231 (313)
T ss_dssp CCEEEEEEC---CCEEECCCHHHHHHHGGGGTEEEEEEEE
T ss_pred cceEEEEECCcccCcceEEcHHHHHHHHHHcCcEEEEecC
Confidence 0000112346789999999999999988643
No 124
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.70 E-value=1.5e-16 Score=139.84 Aligned_cols=157 Identities=17% Similarity=0.080 Sum_probs=112.5
Q ss_pred HHHHHhhcc-cCCCeEEEEcCCc---CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC
Q 019957 156 KMAQEYFKS-AQGGLLVDVSCGS---GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (333)
Q Consensus 156 ~~~~~~l~~-~~~~~vLDiGcG~---G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (333)
..+..++.. ....+|||||||+ |.....+.+..|..+|+++|.|+.|++.|++++...+ ..++.++++|+.++
T Consensus 67 ~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~---~~~~~~v~aD~~~~ 143 (277)
T 3giw_A 67 NRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP---EGRTAYVEADMLDP 143 (277)
T ss_dssp HHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS---SSEEEEEECCTTCH
T ss_pred HHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC---CCcEEEEEecccCh
Confidence 344445543 3446899999997 3444444555678899999999999999999886532 34799999999875
Q ss_pred C------CCCCCcc-----eEEeccccccCCC---hHHHHHHHHHhccCCcEEEEEEecccCCCc--chhhHHHHHhhhc
Q 019957 232 P------FASGFVD-----AVHAGAALHCWPS---PSNAVAEISRILRSGGVFVGTTFLRYTSST--SLTGRVLRERILQ 295 (333)
Q Consensus 232 p------~~~~~fD-----~V~~~~vl~h~~d---~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~--~~~~~~~~~~~~~ 295 (333)
+ ...+.|| .|+++.+|||+++ +..+++++.+.|+|||+|++.+........ ..+...+. ....
T Consensus 144 ~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~~~~~~~~~~-~~g~ 222 (277)
T 3giw_A 144 ASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEVGRVAREYA-ARNM 222 (277)
T ss_dssp HHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSHHHHHHHHHHHH-HTTC
T ss_pred hhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCHHHHHHHHHHHH-hcCC
Confidence 2 1134566 5889999999998 578999999999999999999877542111 11111122 1223
Q ss_pred cCCCCCHHHHHHHHHhCCCcEEE
Q 019957 296 NYNYLTEEEIEDLCTSCGLTNYT 318 (333)
Q Consensus 296 ~~~~~t~~~l~~ll~~aGf~~v~ 318 (333)
.+.+++.+++..+|. ||++++
T Consensus 223 p~~~rs~~ei~~~f~--Glelve 243 (277)
T 3giw_A 223 PMRLRTHAEAEEFFE--GLELVE 243 (277)
T ss_dssp CCCCCCHHHHHHTTT--TSEECT
T ss_pred CCccCCHHHHHHHhC--CCcccC
Confidence 467889999999995 998654
No 125
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.69 E-value=1.7e-16 Score=133.37 Aligned_cols=123 Identities=18% Similarity=0.117 Sum_probs=100.2
Q ss_pred HHHHHHHHHhhcc---cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccC
Q 019957 152 DEEFKMAQEYFKS---AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV 228 (333)
Q Consensus 152 ~~~~~~~~~~l~~---~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~ 228 (333)
+...+.+.+.+.. .++.+|||+|||+|.++..++..+ ..+|+|+|+|+.+++.+++++...+ ..++.++++|+
T Consensus 27 ~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~---~~~v~~~~~d~ 102 (189)
T 3p9n_A 27 DRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRG-AASVLFVESDQRSAAVIARNIEALG---LSGATLRRGAV 102 (189)
T ss_dssp HHHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEECCHHHHHHHHHHHHHHT---CSCEEEEESCH
T ss_pred HHHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHcC---CCceEEEEccH
Confidence 3344445444443 467899999999999999887764 4589999999999999999998876 46899999999
Q ss_pred CCCC--CCCCCcceEEeccccccC-CChHHHHHHHHH--hccCCcEEEEEEeccc
Q 019957 229 CRLP--FASGFVDAVHAGAALHCW-PSPSNAVAEISR--ILRSGGVFVGTTFLRY 278 (333)
Q Consensus 229 ~~lp--~~~~~fD~V~~~~vl~h~-~d~~~~l~~~~r--~LkpgG~l~i~~~~~~ 278 (333)
.+++ +.+++||+|++...+++. .+...+++++.+ +|||||++++......
T Consensus 103 ~~~~~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 103 AAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp HHHHHHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred HHHHhhccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 7754 346899999999887775 667889999999 9999999999887653
No 126
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.69 E-value=4.9e-16 Score=129.86 Aligned_cols=108 Identities=19% Similarity=0.179 Sum_probs=85.9
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-CCCCCcceEEe
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-FASGFVDAVHA 243 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-~~~~~fD~V~~ 243 (333)
.++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++++...+ ..++.++.++...++ +.+++||+|++
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~~--~~v~~vD~s~~~l~~a~~~~~~~~---~~~v~~~~~~~~~l~~~~~~~fD~v~~ 95 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGLS--KKVYAFDVQEQALGKTSQRLSDLG---IENTELILDGHENLDHYVREPIRAAIF 95 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHHT---CCCEEEEESCGGGGGGTCCSCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHcC---CCcEEEEeCcHHHHHhhccCCcCEEEE
Confidence 457899999999999999999884 499999999999999999998876 468999998887753 44778999988
Q ss_pred c-ccccc--------CCChHHHHHHHHHhccCCcEEEEEEecc
Q 019957 244 G-AALHC--------WPSPSNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 244 ~-~vl~h--------~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
. ..+++ ..+...+++++.++|||||.+++..+..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 138 (185)
T 3mti_A 96 NLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYG 138 (185)
T ss_dssp EEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC--
T ss_pred eCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Confidence 7 33332 1233578899999999999999987643
No 127
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.68 E-value=1.1e-16 Score=132.27 Aligned_cols=164 Identities=10% Similarity=0.050 Sum_probs=115.9
Q ss_pred CCcHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccC
Q 019957 149 PGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV 228 (333)
Q Consensus 149 ~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~ 228 (333)
+..+.+...+..++. +..+|||+|||+|.++..+....|..+|+++|+|+.|++.+++++...|. ..++.+ .|.
T Consensus 34 p~ld~fY~~~~~~l~--~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~--~~~v~~--~d~ 107 (200)
T 3fzg_A 34 ATLNDFYTYVFGNIK--HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKT--TIKYRF--LNK 107 (200)
T ss_dssp GGHHHHHHHHHHHSC--CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCC--SSEEEE--ECC
T ss_pred HhHHHHHHHHHhhcC--CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCC--CccEEE--ecc
Confidence 334555566666664 36799999999999999999988888999999999999999999988774 335555 565
Q ss_pred CCCCCCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHH
Q 019957 229 CRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDL 308 (333)
Q Consensus 229 ~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~l 308 (333)
... ...++||+|++..+|||+.+....+.++.+.|||||+++-...-.-..-.+ ...-.-...|++.
T Consensus 108 ~~~-~~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfISfptksl~Gr~~------------gm~~~Y~~~~~~~ 174 (200)
T 3fzg_A 108 ESD-VYKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISFPIKSLSGKEK------------GMEENYQLWFESF 174 (200)
T ss_dssp HHH-HTTSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEEEECCCCC--CT------------TCCCCHHHHHHHH
T ss_pred ccc-CCCCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEEeChHHhcCCCc------------chhhhHHHHHHHh
Confidence 433 246789999999999999777788889999999999888766211100000 1111123456666
Q ss_pred HHhCCCcEEEEEEeCeEEEEEEeC
Q 019957 309 CTSCGLTNYTSKVQQSFIMFAAQK 332 (333)
Q Consensus 309 l~~aGf~~v~~~~~~~~~~~~a~k 332 (333)
+ ...+.+++....+.=++++.+|
T Consensus 175 ~-~~~~~~~~~~~~~nEl~y~~~~ 197 (200)
T 3fzg_A 175 T-KGWIKILDSKVIGNELVYITSG 197 (200)
T ss_dssp T-TTTSCEEEEEEETTEEEEEECC
T ss_pred c-cCcceeeeeeeeCceEEEEEec
Confidence 6 4555666656655555555544
No 128
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.68 E-value=5.9e-16 Score=132.00 Aligned_cols=114 Identities=18% Similarity=0.115 Sum_probs=99.5
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC
Q 019957 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (333)
Q Consensus 152 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (333)
......+.+.+...++.+|||||||+|.++..+++.+. +|+++|+++.+++.+++++...+ ..++.++.+|+.+.
T Consensus 63 ~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~--~v~~vD~~~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~ 137 (210)
T 3lbf_A 63 PYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQ--HVCSVERIKGLQWQARRRLKNLD---LHNVSTRHGDGWQG 137 (210)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSS--EEEEEESCHHHHHHHHHHHHHTT---CCSEEEEESCGGGC
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHhCC--EEEEEecCHHHHHHHHHHHHHcC---CCceEEEECCcccC
Confidence 34556677777777889999999999999999999854 99999999999999999998876 45899999999887
Q ss_pred CCCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEec
Q 019957 232 PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
+..+++||+|++..+++|+++ ++.++|||||++++..+.
T Consensus 138 ~~~~~~~D~i~~~~~~~~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 138 WQARAPFDAIIVTAAPPEIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CGGGCCEEEEEESSBCSSCCT------HHHHTEEEEEEEEEEECS
T ss_pred CccCCCccEEEEccchhhhhH------HHHHhcccCcEEEEEEcC
Confidence 666789999999999999986 588999999999998876
No 129
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.68 E-value=5.1e-16 Score=131.05 Aligned_cols=112 Identities=17% Similarity=0.266 Sum_probs=92.5
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-CCCCCcceE
Q 019957 164 SAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-FASGFVDAV 241 (333)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-~~~~~fD~V 241 (333)
..++.+|||+|||+|.++..+++. ++..+++|+|+++.+++.+++++...++ ..++.++++|+.+++ +.+++||+|
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~~fD~v 97 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNL--IDRVTLIKDGHQNMDKYIDCPVKAV 97 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTC--GGGEEEECSCGGGGGGTCCSCEEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCCeEEEECCHHHHhhhccCCceEE
Confidence 345789999999999999999887 3456999999999999999999988764 468999999998775 556899999
Q ss_pred Eeccccc---------cCCChHHHHHHHHHhccCCcEEEEEEecc
Q 019957 242 HAGAALH---------CWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 242 ~~~~vl~---------h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
++...+. +..+...+++++.++|||||++++.++..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 98 MFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp EEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred EEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 9876541 11134579999999999999999988654
No 130
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.67 E-value=5.7e-17 Score=138.31 Aligned_cols=139 Identities=17% Similarity=0.076 Sum_probs=89.8
Q ss_pred HHHHHHhhcc-cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCC
Q 019957 155 FKMAQEYFKS-AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (333)
Q Consensus 155 ~~~~~~~l~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~ 233 (333)
++.+.+.+.. .++.+|||+|||+|.++..+++.++..+++|+|+|+.+++.+++++...+ . ++.++++|+.+ ++
T Consensus 18 ~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~-~~~~~~~d~~~-~~ 92 (215)
T 4dzr_A 18 VEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFG---A-VVDWAAADGIE-WL 92 (215)
T ss_dssp HHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-----------------------CCHHHHHH-HH
T ss_pred HHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhC---C-ceEEEEcchHh-hh
Confidence 3455555544 56789999999999999999999877799999999999999999887654 2 78889999877 55
Q ss_pred CC-----CCcceEEecccccc------CCCh--------------------HHHHHHHHHhccCCcEEEEEEecccCCCc
Q 019957 234 AS-----GFVDAVHAGAALHC------WPSP--------------------SNAVAEISRILRSGGVFVGTTFLRYTSST 282 (333)
Q Consensus 234 ~~-----~~fD~V~~~~vl~h------~~d~--------------------~~~l~~~~r~LkpgG~l~i~~~~~~~~~~ 282 (333)
.+ ++||+|+++..+++ +... ..+++++.++|||||++++.+...
T Consensus 93 ~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~----- 167 (215)
T 4dzr_A 93 IERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGH----- 167 (215)
T ss_dssp HHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTT-----
T ss_pred hhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECC-----
Confidence 55 89999999644432 2211 677889999999999955544221
Q ss_pred chhhHHHHHhhhccCCCCCHHHHHHHHH--hCCCcEEEEE
Q 019957 283 SLTGRVLRERILQNYNYLTEEEIEDLCT--SCGLTNYTSK 320 (333)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~t~~~l~~ll~--~aGf~~v~~~ 320 (333)
...+++..+++ +.||..++..
T Consensus 168 -----------------~~~~~~~~~l~~~~~gf~~~~~~ 190 (215)
T 4dzr_A 168 -----------------NQADEVARLFAPWRERGFRVRKV 190 (215)
T ss_dssp -----------------SCHHHHHHHTGGGGGGTEECCEE
T ss_pred -----------------ccHHHHHHHHHHhhcCCceEEEE
Confidence 24567888999 9999876643
No 131
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.67 E-value=1.3e-15 Score=135.66 Aligned_cols=138 Identities=17% Similarity=0.206 Sum_probs=112.8
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC
Q 019957 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (333)
Q Consensus 152 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (333)
......+...+...++.+|||+|||+|.++..+++. ++..+++++|+++.+++.+++++...++ ..++.++.+|+.+
T Consensus 98 ~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~ 175 (277)
T 1o54_A 98 PKDSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGL--IERVTIKVRDISE 175 (277)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTC--GGGEEEECCCGGG
T ss_pred HHHHHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC--CCCEEEEECCHHH
Confidence 344466677777778889999999999999999998 6677999999999999999999887663 3579999999977
Q ss_pred CCCCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHH
Q 019957 231 LPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCT 310 (333)
Q Consensus 231 lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~ 310 (333)
. +++++||+|++ +.+++..+++++.++|+|||.+++.++... ...++.+.++
T Consensus 176 ~-~~~~~~D~V~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~----------------------~~~~~~~~l~ 227 (277)
T 1o54_A 176 G-FDEKDVDALFL-----DVPDPWNYIDKCWEALKGGGRFATVCPTTN----------------------QVQETLKKLQ 227 (277)
T ss_dssp C-CSCCSEEEEEE-----CCSCGGGTHHHHHHHEEEEEEEEEEESSHH----------------------HHHHHHHHHH
T ss_pred c-ccCCccCEEEE-----CCcCHHHHHHHHHHHcCCCCEEEEEeCCHH----------------------HHHHHHHHHH
Confidence 6 55678999998 457888999999999999999999885321 1246667788
Q ss_pred hCCCcEEEE
Q 019957 311 SCGLTNYTS 319 (333)
Q Consensus 311 ~aGf~~v~~ 319 (333)
+.||..++.
T Consensus 228 ~~gf~~~~~ 236 (277)
T 1o54_A 228 ELPFIRIEV 236 (277)
T ss_dssp HSSEEEEEE
T ss_pred HCCCceeEE
Confidence 899987764
No 132
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.66 E-value=1.4e-15 Score=134.22 Aligned_cols=137 Identities=11% Similarity=0.181 Sum_probs=108.4
Q ss_pred HHHHhhccc-CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC--C
Q 019957 157 MAQEYFKSA-QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--F 233 (333)
Q Consensus 157 ~~~~~l~~~-~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp--~ 233 (333)
.+..++... ++.+|||+|||+|.++..+++.++. +++|+|+++.+++.|++++...++ ..++.++.+|+.+++ +
T Consensus 39 ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~--~~~v~~~~~D~~~~~~~~ 115 (259)
T 3lpm_A 39 LLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQL--EDQIEIIEYDLKKITDLI 115 (259)
T ss_dssp HHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTC--TTTEEEECSCGGGGGGTS
T ss_pred HHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCC--cccEEEEECcHHHhhhhh
Confidence 444555555 6889999999999999999998743 999999999999999999988775 557999999998865 4
Q ss_pred CCCCcceEEeccccccC-----C---------------ChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhh
Q 019957 234 ASGFVDAVHAGAALHCW-----P---------------SPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERI 293 (333)
Q Consensus 234 ~~~~fD~V~~~~vl~h~-----~---------------d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~ 293 (333)
.+++||+|+++-.+.+. . +...+++.+.++|||||++++..+.
T Consensus 116 ~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~----------------- 178 (259)
T 3lpm_A 116 PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP----------------- 178 (259)
T ss_dssp CTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECT-----------------
T ss_pred ccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH-----------------
Confidence 57899999996544322 1 2356899999999999999996432
Q ss_pred hccCCCCCHHHHHHHHHhCCCcEEEE
Q 019957 294 LQNYNYLTEEEIEDLCTSCGLTNYTS 319 (333)
Q Consensus 294 ~~~~~~~t~~~l~~ll~~aGf~~v~~ 319 (333)
....++...+++.||...+.
T Consensus 179 ------~~~~~~~~~l~~~~~~~~~~ 198 (259)
T 3lpm_A 179 ------ERLLDIIDIMRKYRLEPKRI 198 (259)
T ss_dssp ------TTHHHHHHHHHHTTEEEEEE
T ss_pred ------HHHHHHHHHHHHCCCceEEE
Confidence 13467888899999987764
No 133
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.66 E-value=2e-15 Score=131.06 Aligned_cols=150 Identities=18% Similarity=0.192 Sum_probs=105.2
Q ss_pred hcccCCCeEEEEcCCcCHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC---CCCCCCC
Q 019957 162 FKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR---LPFASGF 237 (333)
Q Consensus 162 l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~---lp~~~~~ 237 (333)
+...++.+|||+|||+|.++..+++. ++..+|+|+|+|+.+++.+.++.+. ..++.++.+|+.+ +++.+++
T Consensus 73 ~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~-----~~~v~~~~~d~~~~~~~~~~~~~ 147 (233)
T 2ipx_A 73 IHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK-----RTNIIPVIEDARHPHKYRMLIAM 147 (233)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH-----CTTEEEECSCTTCGGGGGGGCCC
T ss_pred ecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc-----cCCeEEEEcccCChhhhcccCCc
Confidence 33456789999999999999999987 3556999999999988877776665 3589999999987 4455779
Q ss_pred cceEEeccccccCCCh-HHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCCcE
Q 019957 238 VDAVHAGAALHCWPSP-SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTN 316 (333)
Q Consensus 238 fD~V~~~~vl~h~~d~-~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf~~ 316 (333)
||+|++... .++. ..++.++.++|||||.+++.............. ..+. ++ .++|+++||++
T Consensus 148 ~D~V~~~~~---~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~-----------~~~~-~~-~~~l~~~Gf~~ 211 (233)
T 2ipx_A 148 VDVIFADVA---QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAE-----------AVFA-SE-VKKMQQENMKP 211 (233)
T ss_dssp EEEEEECCC---CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHH-----------HHHH-HH-HHTTGGGTEEE
T ss_pred EEEEEEcCC---CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHH-----------HHHH-HH-HHHHHHCCCce
Confidence 999998544 2222 456889999999999999965432100000000 0122 23 48889999999
Q ss_pred EEEEEeCe----EEEEEEeC
Q 019957 317 YTSKVQQS----FIMFAAQK 332 (333)
Q Consensus 317 v~~~~~~~----~~~~~a~k 332 (333)
++...... +.++++++
T Consensus 212 ~~~~~~~~~~~~~~~v~~~~ 231 (233)
T 2ipx_A 212 QEQLTLEPYERDHAVVVGVY 231 (233)
T ss_dssp EEEEECTTTSSSEEEEEEEE
T ss_pred EEEEecCCccCCcEEEEEEe
Confidence 88544332 45555543
No 134
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.66 E-value=1.3e-15 Score=129.45 Aligned_cols=132 Identities=20% Similarity=0.171 Sum_probs=104.3
Q ss_pred HHHHHHhhccc---CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC
Q 019957 155 FKMAQEYFKSA---QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (333)
Q Consensus 155 ~~~~~~~l~~~---~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (333)
.+.+.+.+... ++.+|||+|||+|.++..++...+..+++|+|+|+.+++.+++++...+ ..++.++.+|+.+.
T Consensus 51 ~~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~ 127 (207)
T 1jsx_A 51 VRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELK---LENIEPVQSRVEEF 127 (207)
T ss_dssp HHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT---CSSEEEEECCTTTS
T ss_pred HHHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcC---CCCeEEEecchhhC
Confidence 34444444322 3679999999999999999998777799999999999999999988776 34599999999887
Q ss_pred CCCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHh
Q 019957 232 PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTS 311 (333)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~ 311 (333)
+ +.++||+|++.. +.+...+++++.++|+|||.+++.... ...+++..++.
T Consensus 128 ~-~~~~~D~i~~~~----~~~~~~~l~~~~~~L~~gG~l~~~~~~-----------------------~~~~~~~~~~~- 178 (207)
T 1jsx_A 128 P-SEPPFDGVISRA----FASLNDMVSWCHHLPGEQGRFYALKGQ-----------------------MPEDEIALLPE- 178 (207)
T ss_dssp C-CCSCEEEEECSC----SSSHHHHHHHHTTSEEEEEEEEEEESS-----------------------CCHHHHHTSCT-
T ss_pred C-ccCCcCEEEEec----cCCHHHHHHHHHHhcCCCcEEEEEeCC-----------------------CchHHHHHHhc-
Confidence 6 457899999854 356789999999999999999997421 23456666655
Q ss_pred CCCcEEEE
Q 019957 312 CGLTNYTS 319 (333)
Q Consensus 312 aGf~~v~~ 319 (333)
||+.++.
T Consensus 179 -g~~~~~~ 185 (207)
T 1jsx_A 179 -EYQVESV 185 (207)
T ss_dssp -TEEEEEE
T ss_pred -CCceeee
Confidence 9988763
No 135
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.66 E-value=5.1e-15 Score=127.93 Aligned_cols=157 Identities=11% Similarity=0.056 Sum_probs=106.7
Q ss_pred HHHHHHhhc---ccCCCeEEEEcCCcCHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC
Q 019957 155 FKMAQEYFK---SAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (333)
Q Consensus 155 ~~~~~~~l~---~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (333)
...+...+. ..++.+|||+|||+|.++..+++. ++...|+|+|+++.+++...+.... ..++.++.+|+..
T Consensus 62 a~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~-----r~nv~~i~~Da~~ 136 (232)
T 3id6_C 62 AGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR-----RPNIFPLLADARF 136 (232)
T ss_dssp HHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH-----CTTEEEEECCTTC
T ss_pred HHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh-----cCCeEEEEccccc
Confidence 344444443 667899999999999999999876 5567999999999987655544433 4589999999876
Q ss_pred CC---CCCCCcceEEeccccccCCChHHHH-HHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHH
Q 019957 231 LP---FASGFVDAVHAGAALHCWPSPSNAV-AEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIE 306 (333)
Q Consensus 231 lp---~~~~~fD~V~~~~vl~h~~d~~~~l-~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~ 306 (333)
.. ...++||+|++.... ++....+ ..+.++|||||.|++...... . .... .... ..++..
T Consensus 137 ~~~~~~~~~~~D~I~~d~a~---~~~~~il~~~~~~~LkpGG~lvisik~~~---~-------d~t~-~~~e--~~~~~~ 200 (232)
T 3id6_C 137 PQSYKSVVENVDVLYVDIAQ---PDQTDIAIYNAKFFLKVNGDMLLVIKARS---I-------DVTK-DPKE--IYKTEV 200 (232)
T ss_dssp GGGTTTTCCCEEEEEECCCC---TTHHHHHHHHHHHHEEEEEEEEEEEC-----------------C-CSSS--STTHHH
T ss_pred chhhhccccceEEEEecCCC---hhHHHHHHHHHHHhCCCCeEEEEEEccCC---c-------ccCC-CHHH--HHHHHH
Confidence 42 124689999987553 5555544 455669999999999853221 0 0000 0011 114566
Q ss_pred HHHHhCCCcEEEEEEeCeE----EEEEEeC
Q 019957 307 DLCTSCGLTNYTSKVQQSF----IMFAAQK 332 (333)
Q Consensus 307 ~ll~~aGf~~v~~~~~~~~----~~~~a~k 332 (333)
+.|+++||++++.....+| ++++++|
T Consensus 201 ~~L~~~gf~~~~~~~l~p~~~~h~~v~~~~ 230 (232)
T 3id6_C 201 EKLENSNFETIQIINLDPYDKDHAIVLSKY 230 (232)
T ss_dssp HHHHHTTEEEEEEEECTTTCSSCEEEEEEE
T ss_pred HHHHHCCCEEEEEeccCCCcCceEEEEEEe
Confidence 7888999999997765444 6666665
No 136
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.65 E-value=3.6e-16 Score=134.49 Aligned_cols=109 Identities=15% Similarity=0.156 Sum_probs=91.4
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC-C--CCCCCcceEE
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-P--FASGFVDAVH 242 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-p--~~~~~fD~V~ 242 (333)
++.+|||||||+|.++..+++.++...|+|+|+|+.+++.|++++...+ ..++.++.+|+.++ + +++++||.|+
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~---l~nv~~~~~Da~~~l~~~~~~~~~d~v~ 110 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEG---LSNLRVMCHDAVEVLHKMIPDNSLRMVQ 110 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTT---CSSEEEECSCHHHHHHHHSCTTCEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhC---CCcEEEEECCHHHHHHHHcCCCChheEE
Confidence 4679999999999999999999888899999999999999999988876 46799999998774 3 6688999999
Q ss_pred eccccccCCCh--------HHHHHHHHHhccCCcEEEEEEecc
Q 019957 243 AGAALHCWPSP--------SNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 243 ~~~vl~h~~d~--------~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
+.+...+.... ..+++++.++|||||+|++.+...
T Consensus 111 ~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~ 153 (218)
T 3dxy_A 111 LFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWE 153 (218)
T ss_dssp EESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCH
T ss_pred EeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCH
Confidence 87543332221 258999999999999999988543
No 137
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.65 E-value=3.6e-15 Score=128.12 Aligned_cols=136 Identities=10% Similarity=0.068 Sum_probs=110.5
Q ss_pred HHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCC
Q 019957 155 FKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA 234 (333)
Q Consensus 155 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~ 234 (333)
++.+.+++. ++.+|||||||+|.++..+++.++..+|+++|+++.+++.|++++..+++ ..++.+..+|..+...+
T Consensus 12 L~~i~~~v~--~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl--~~~I~~~~gD~l~~~~~ 87 (230)
T 3lec_A 12 LQKVANYVP--KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGL--TSKIDVRLANGLSAFEE 87 (230)
T ss_dssp HHHHHTTSC--TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTC--TTTEEEEECSGGGGCCG
T ss_pred HHHHHHhCC--CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEECchhhcccc
Confidence 355555654 46799999999999999999998777899999999999999999999886 56799999999876544
Q ss_pred CCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCC
Q 019957 235 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGL 314 (333)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf 314 (333)
++.||+|+..++.-. -...+|.+..+.|+++|.|++.... ..+.++++|.++||
T Consensus 88 ~~~~D~IviaGmGg~--lI~~IL~~~~~~l~~~~~lIlqp~~------------------------~~~~lr~~L~~~Gf 141 (230)
T 3lec_A 88 ADNIDTITICGMGGR--LIADILNNDIDKLQHVKTLVLQPNN------------------------REDDLRKWLAANDF 141 (230)
T ss_dssp GGCCCEEEEEEECHH--HHHHHHHHTGGGGTTCCEEEEEESS------------------------CHHHHHHHHHHTTE
T ss_pred ccccCEEEEeCCchH--HHHHHHHHHHHHhCcCCEEEEECCC------------------------ChHHHHHHHHHCCC
Confidence 447999887655432 1356788888999999999886631 35789999999999
Q ss_pred cEEEEE
Q 019957 315 TNYTSK 320 (333)
Q Consensus 315 ~~v~~~ 320 (333)
.++++.
T Consensus 142 ~i~~E~ 147 (230)
T 3lec_A 142 EIVAED 147 (230)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 998865
No 138
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.64 E-value=6.2e-15 Score=131.47 Aligned_cols=137 Identities=14% Similarity=0.131 Sum_probs=109.2
Q ss_pred HHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCC
Q 019957 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (333)
Q Consensus 156 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (333)
..+...+ .++.+|||+|||+|.++..+++.+.. +|+|+|+|+.+++.|++++..+++ ..++.++++|+.+++. +
T Consensus 117 ~~l~~~~--~~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~--~~~v~~~~~D~~~~~~-~ 190 (278)
T 2frn_A 117 VRMAKVA--KPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKV--EDRMSAYNMDNRDFPG-E 190 (278)
T ss_dssp HHHHHHC--CTTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTC--TTTEEEECSCTTTCCC-C
T ss_pred HHHHHhC--CCCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCC--CceEEEEECCHHHhcc-c
Confidence 3444443 34789999999999999999998753 799999999999999999998875 4569999999998876 6
Q ss_pred CCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCCc
Q 019957 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLT 315 (333)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf~ 315 (333)
++||+|++... .+...+++++.++|||||.+++.+..... ....-..+++...++++||+
T Consensus 191 ~~fD~Vi~~~p----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~----------------~~~~~~~~~i~~~~~~~G~~ 250 (278)
T 2frn_A 191 NIADRILMGYV----VRTHEFIPKALSIAKDGAIIHYHNTVPEK----------------LMPREPFETFKRITKEYGYD 250 (278)
T ss_dssp SCEEEEEECCC----SSGGGGHHHHHHHEEEEEEEEEEEEEEGG----------------GTTTTTHHHHHHHHHHTTCE
T ss_pred CCccEEEECCc----hhHHHHHHHHHHHCCCCeEEEEEEeeccc----------------cccccHHHHHHHHHHHcCCe
Confidence 79999998543 34567899999999999999998876421 01112457888999999998
Q ss_pred EEE
Q 019957 316 NYT 318 (333)
Q Consensus 316 ~v~ 318 (333)
...
T Consensus 251 ~~~ 253 (278)
T 2frn_A 251 VEK 253 (278)
T ss_dssp EEE
T ss_pred eEE
Confidence 754
No 139
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.64 E-value=2.4e-15 Score=137.97 Aligned_cols=112 Identities=21% Similarity=0.317 Sum_probs=96.1
Q ss_pred HHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCC
Q 019957 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (333)
Q Consensus 156 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (333)
+.+.+.+...++.+|||||||+|.++..+++.+ ..+|+|+|+|+ +++.|+++++.+++ ..++.++.+|+.++++++
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g-~~~v~gvD~s~-~~~~a~~~~~~~~~--~~~i~~~~~d~~~~~~~~ 129 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAG-AKKVLGVDQSE-ILYQAMDIIRLNKL--EDTITLIKGKIEEVHLPV 129 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEESST-HHHHHHHHHHHTTC--TTTEEEEESCTTTSCCSC
T ss_pred HHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcC-CCEEEEEChHH-HHHHHHHHHHHcCC--CCcEEEEEeeHHHhcCCC
Confidence 445555555678899999999999999999885 45899999997 99999999888774 478999999999988887
Q ss_pred CCcceEEecc---ccccCCChHHHHHHHHHhccCCcEEE
Q 019957 236 GFVDAVHAGA---ALHCWPSPSNAVAEISRILRSGGVFV 271 (333)
Q Consensus 236 ~~fD~V~~~~---vl~h~~d~~~~l~~~~r~LkpgG~l~ 271 (333)
++||+|++.. .+.|..++..+++++.++|||||+++
T Consensus 130 ~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 130 EKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp SCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred CcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 8999999866 56777778889999999999999998
No 140
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.64 E-value=1.1e-15 Score=134.22 Aligned_cols=129 Identities=12% Similarity=-0.033 Sum_probs=105.2
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCC---CCCcceE
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA---SGFVDAV 241 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~---~~~fD~V 241 (333)
.++.+|||||||+|..+..++...+..+|+++|+|+.+++.++++....+ ..++.++.+|+++++.. +++||+|
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---l~~v~~~~~d~~~~~~~~~~~~~fD~I 155 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLG---LKGARALWGRAEVLAREAGHREAYARA 155 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHT---CSSEEEEECCHHHHTTSTTTTTCEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhC---CCceEEEECcHHHhhcccccCCCceEE
Confidence 35779999999999999999998778899999999999999999998877 44699999999887643 4799999
Q ss_pred EeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCCcEEEEE
Q 019957 242 HAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSK 320 (333)
Q Consensus 242 ~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf~~v~~~ 320 (333)
++..+ .+...+++.+.++|||||++++...... .. ...++...+++.||++.++.
T Consensus 156 ~s~a~----~~~~~ll~~~~~~LkpgG~l~~~~g~~~-------~~-------------e~~~~~~~l~~~G~~~~~~~ 210 (249)
T 3g89_A 156 VARAV----APLCVLSELLLPFLEVGGAAVAMKGPRV-------EE-------------ELAPLPPALERLGGRLGEVL 210 (249)
T ss_dssp EEESS----CCHHHHHHHHGGGEEEEEEEEEEECSCC-------HH-------------HHTTHHHHHHHHTEEEEEEE
T ss_pred EECCc----CCHHHHHHHHHHHcCCCeEEEEEeCCCc-------HH-------------HHHHHHHHHHHcCCeEEEEE
Confidence 99654 5678899999999999999998663211 10 12356778888999887754
No 141
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.63 E-value=1.8e-15 Score=133.14 Aligned_cols=111 Identities=14% Similarity=0.205 Sum_probs=89.5
Q ss_pred HHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCC
Q 019957 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (333)
Q Consensus 154 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~ 233 (333)
..+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.+++++... ++..++.+++.
T Consensus 33 ~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~--~V~gvD~S~~ml~~Ar~~~~~~---------~v~~~~~~~~~ 101 (261)
T 3iv6_A 33 DRENDIFLENIVPGSTVAVIGASTRFLIEKALERGA--SVTVFDFSQRMCDDLAEALADR---------CVTIDLLDITA 101 (261)
T ss_dssp HHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTSSS---------CCEEEECCTTS
T ss_pred HHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCC--EEEEEECCHHHHHHHHHHHHhc---------cceeeeeeccc
Confidence 345666677777788999999999999999999875 9999999999999999986442 23444444332
Q ss_pred -----CCCCcceEEeccccccCCC--hHHHHHHHHHhccCCcEEEEEEec
Q 019957 234 -----ASGFVDAVHAGAALHCWPS--PSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 234 -----~~~~fD~V~~~~vl~h~~d--~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
.+++||+|++..+++|+.. ...+++++.++| |||+++++...
T Consensus 102 ~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 102 EIPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp CCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred ccccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 2568999999999999864 457899999999 99999998754
No 142
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.63 E-value=5e-15 Score=131.96 Aligned_cols=120 Identities=17% Similarity=0.208 Sum_probs=101.4
Q ss_pred cHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhc-C-cCCCCCeEEEEcc
Q 019957 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQD-N-TILTSNLALVRAD 227 (333)
Q Consensus 151 ~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~-~-~~~~~~i~~~~~d 227 (333)
.......+...+...++.+|||+|||+|.++..+++. ++..+++++|+++.+++.+++++... + + ..++.++.+|
T Consensus 84 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~--~~~v~~~~~d 161 (280)
T 1i9g_A 84 YPKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQP--PDNWRLVVSD 161 (280)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSC--CTTEEEECSC
T ss_pred cHHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCC--CCcEEEEECc
Confidence 3445566777777778889999999999999999985 55679999999999999999998765 3 2 3579999999
Q ss_pred CCCCCCCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecc
Q 019957 228 VCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 228 ~~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
+.+.++++++||+|++ +.+++..+++++.++|+|||.+++.++..
T Consensus 162 ~~~~~~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 162 LADSELPDGSVDRAVL-----DMLAPWEVLDAVSRLLVAGGVLMVYVATV 206 (280)
T ss_dssp GGGCCCCTTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred hHhcCCCCCceeEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 9888777789999998 55688899999999999999999988643
No 143
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.63 E-value=7.8e-15 Score=136.12 Aligned_cols=124 Identities=14% Similarity=0.113 Sum_probs=100.2
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC
Q 019957 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (333)
Q Consensus 152 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (333)
+...+.+.+.+...++.+|||+|||+|.++..+++.++..+|+|+|+|+.+++.+++++..+++....++.++.+|+.+
T Consensus 208 d~~~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~- 286 (375)
T 4dcm_A 208 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS- 286 (375)
T ss_dssp CHHHHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-
T ss_pred cHHHHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-
Confidence 3445667777877777899999999999999999998778999999999999999999988764212368899999987
Q ss_pred CCCCCCcceEEeccccccCC---Ch--HHHHHHHHHhccCCcEEEEEEec
Q 019957 232 PFASGFVDAVHAGAALHCWP---SP--SNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~---d~--~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
++++++||+|+++..+++.. +. ..+++++.++|||||.+++....
T Consensus 287 ~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~ 336 (375)
T 4dcm_A 287 GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANR 336 (375)
T ss_dssp TCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred cCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEEC
Confidence 45678999999998887632 22 36899999999999999997643
No 144
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.63 E-value=9.9e-16 Score=130.07 Aligned_cols=120 Identities=10% Similarity=0.071 Sum_probs=94.5
Q ss_pred HHHHHHHhhcc-cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCC-CCeEEEEccCCCC
Q 019957 154 EFKMAQEYFKS-AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILT-SNLALVRADVCRL 231 (333)
Q Consensus 154 ~~~~~~~~l~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~-~~i~~~~~d~~~l 231 (333)
..+.+.+.+.. .++.+|||+|||+|.++..++..+ ..+|+|+|+|+.+++.|++++...++ . .++.++.+|+.++
T Consensus 40 ~~~~l~~~l~~~~~~~~vLDlGcGtG~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~--~~~~v~~~~~d~~~~ 116 (201)
T 2ift_A 40 VKETLFNWLMPYIHQSECLDGFAGSGSLGFEALSRQ-AKKVTFLELDKTVANQLKKNLQTLKC--SSEQAEVINQSSLDF 116 (201)
T ss_dssp HHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTTC--CTTTEEEECSCHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEcCCccCHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHHhCC--CccceEEEECCHHHH
Confidence 33444444443 257799999999999999877765 35899999999999999999988763 2 6899999998764
Q ss_pred CC--CCCC-cceEEeccccccCCChHHHHHHH--HHhccCCcEEEEEEecc
Q 019957 232 PF--ASGF-VDAVHAGAALHCWPSPSNAVAEI--SRILRSGGVFVGTTFLR 277 (333)
Q Consensus 232 p~--~~~~-fD~V~~~~vl~h~~d~~~~l~~~--~r~LkpgG~l~i~~~~~ 277 (333)
.. .+++ ||+|++...+ |..+...+++.+ .++|||||.+++.+...
T Consensus 117 ~~~~~~~~~fD~I~~~~~~-~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 117 LKQPQNQPHFDVVFLDPPF-HFNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp TTSCCSSCCEEEEEECCCS-SSCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred HHhhccCCCCCEEEECCCC-CCccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 32 3578 9999998774 356677889999 67899999999988654
No 145
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.63 E-value=7.1e-15 Score=126.92 Aligned_cols=147 Identities=16% Similarity=0.185 Sum_probs=106.1
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC---CCCCCcc
Q 019957 164 SAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP---FASGFVD 239 (333)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp---~~~~~fD 239 (333)
..++.+|||+|||+|.++..+++. ++..+|+|+|+++.+++.++++.+. ..++.++.+|+.+.. ...++||
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~~~D 145 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE-----RRNIVPILGDATKPEEYRALVPKVD 145 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS-----CTTEEEEECCTTCGGGGTTTCCCEE
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc-----cCCCEEEEccCCCcchhhcccCCce
Confidence 456789999999999999999987 4556999999999999999887765 358999999997732 1245899
Q ss_pred eEEeccccccCCChH-HHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCCcEEE
Q 019957 240 AVHAGAALHCWPSPS-NAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYT 318 (333)
Q Consensus 240 ~V~~~~vl~h~~d~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf~~v~ 318 (333)
+|++... .++.. .+++++.++|||||.+++..........+. ...+..+++..+ +++ |++++
T Consensus 146 ~v~~~~~---~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~------------~~~~~~~~l~~l-~~~-f~~~~ 208 (227)
T 1g8a_A 146 VIFEDVA---QPTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKE------------PEQVFREVEREL-SEY-FEVIE 208 (227)
T ss_dssp EEEECCC---STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSC------------HHHHHHHHHHHH-HTT-SEEEE
T ss_pred EEEECCC---CHhHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCC------------hhhhhHHHHHHH-Hhh-ceeee
Confidence 9997654 23333 449999999999999999843221111100 012345678777 777 99988
Q ss_pred EEEeCe----EEEEEEeC
Q 019957 319 SKVQQS----FIMFAAQK 332 (333)
Q Consensus 319 ~~~~~~----~~~~~a~k 332 (333)
...... ..+++++|
T Consensus 209 ~~~~~~~~~~~~~~~~~~ 226 (227)
T 1g8a_A 209 RLNLEPYEKDHALFVVRK 226 (227)
T ss_dssp EEECTTTSSSEEEEEEEC
T ss_pred EeccCcccCCCEEEEEEe
Confidence 665333 36666665
No 146
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.63 E-value=1.1e-15 Score=140.90 Aligned_cols=125 Identities=13% Similarity=0.104 Sum_probs=100.5
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHH-------HhcCcCCCCCeEEE
Q 019957 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFI-------KQDNTILTSNLALV 224 (333)
Q Consensus 152 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~-------~~~~~~~~~~i~~~ 224 (333)
...+..+.+.+...++.+|||||||+|.++..++...+..+++|+|+++.+++.|+++. ...|+. ..++.++
T Consensus 159 ~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~-~~rVefi 237 (438)
T 3uwp_A 159 FDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK-HAEYTLE 237 (438)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC-CCEEEEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC-CCCeEEE
Confidence 34456667777778889999999999999999987754456999999999999998754 233320 2589999
Q ss_pred EccCCCCCCCC--CCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEeccc
Q 019957 225 RADVCRLPFAS--GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRY 278 (333)
Q Consensus 225 ~~d~~~lp~~~--~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~ 278 (333)
++|+.++++.+ ..||+|+++.++ +.++....|.++.++|||||+|++.+....
T Consensus 238 ~GD~~~lp~~d~~~~aDVVf~Nn~~-F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 238 RGDFLSEEWRERIANTSVIFVNNFA-FGPEVDHQLKERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp ECCTTSHHHHHHHHTCSEEEECCTT-CCHHHHHHHHHHHTTSCTTCEEEESSCSSC
T ss_pred ECcccCCccccccCCccEEEEcccc-cCchHHHHHHHHHHcCCCCcEEEEeecccC
Confidence 99999988754 479999998776 457788899999999999999999876654
No 147
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.62 E-value=6.9e-15 Score=131.40 Aligned_cols=150 Identities=15% Similarity=0.058 Sum_probs=106.3
Q ss_pred HHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHH-----HhcCcC--CCCCeEEE
Q 019957 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDF-SENMLRQCYDFI-----KQDNTI--LTSNLALV 224 (333)
Q Consensus 153 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~-s~~~~~~a~~~~-----~~~~~~--~~~~i~~~ 224 (333)
...+.+.......++.+|||+|||+|.++..+++.+ ..+|+|+|+ ++.+++.++++. ...++. ...++.+.
T Consensus 66 ~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~ 144 (281)
T 3bzb_A 66 ALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVV 144 (281)
T ss_dssp HHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEE
T ss_pred HHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEE
Confidence 344555555544567899999999999999988875 458999999 899999999988 443320 00367888
Q ss_pred EccCCCCC--C----CCCCcceEEeccccccCCChHHHHHHHHHhcc---C--CcEEEEEEecccCCCcchhhHHHHHhh
Q 019957 225 RADVCRLP--F----ASGFVDAVHAGAALHCWPSPSNAVAEISRILR---S--GGVFVGTTFLRYTSSTSLTGRVLRERI 293 (333)
Q Consensus 225 ~~d~~~lp--~----~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~Lk---p--gG~l~i~~~~~~~~~~~~~~~~~~~~~ 293 (333)
..+..+.. + .+++||+|++..+++|.++...+++.+.++|| | ||++++...... +. .
T Consensus 145 ~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~----~~----~---- 212 (281)
T 3bzb_A 145 PYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHHR----PH----L---- 212 (281)
T ss_dssp ECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC-----------------
T ss_pred EecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeee----cc----c----
Confidence 76654421 1 35789999999999999999999999999999 9 999877542211 00 0
Q ss_pred hccCCCCCHHHHHHHHHhCC-CcEEEEE
Q 019957 294 LQNYNYLTEEEIEDLCTSCG-LTNYTSK 320 (333)
Q Consensus 294 ~~~~~~~t~~~l~~ll~~aG-f~~v~~~ 320 (333)
.....++...+++.| |++.+..
T Consensus 213 -----~~~~~~~~~~l~~~G~f~v~~~~ 235 (281)
T 3bzb_A 213 -----AERDLAFFRLVNADGALIAEPWL 235 (281)
T ss_dssp --------CTHHHHHHHHSTTEEEEEEE
T ss_pred -----chhHHHHHHHHHhcCCEEEEEec
Confidence 011246667888899 8887753
No 148
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.62 E-value=3.5e-15 Score=137.42 Aligned_cols=109 Identities=15% Similarity=0.227 Sum_probs=93.5
Q ss_pred cccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEE
Q 019957 163 KSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVH 242 (333)
Q Consensus 163 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~ 242 (333)
...++.+|||||||+|.++..+++.+ ..+|+|+|+|+ +++.|+++...+++ ..++.++.+|+.++++++++||+|+
T Consensus 63 ~~~~~~~VLDvGcG~G~~~~~la~~g-~~~v~gvD~s~-~l~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~fD~Ii 138 (349)
T 3q7e_A 63 HLFKDKVVLDVGSGTGILCMFAAKAG-ARKVIGIECSS-ISDYAVKIVKANKL--DHVVTIIKGKVEEVELPVEKVDIII 138 (349)
T ss_dssp HHHTTCEEEEESCTTSHHHHHHHHTT-CSEEEEEECST-HHHHHHHHHHHTTC--TTTEEEEESCTTTCCCSSSCEEEEE
T ss_pred ccCCCCEEEEEeccchHHHHHHHHCC-CCEEEEECcHH-HHHHHHHHHHHcCC--CCcEEEEECcHHHccCCCCceEEEE
Confidence 34567899999999999999999984 56999999995 99999999988775 5569999999999988889999999
Q ss_pred eccc---cccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 243 AGAA---LHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 243 ~~~v---l~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
+..+ +.+..++..+++++.++|||||+++....
T Consensus 139 s~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 174 (349)
T 3q7e_A 139 SEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPDRA 174 (349)
T ss_dssp ECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESCEE
T ss_pred EccccccccCchhHHHHHHHHHHhCCCCCEEccccc
Confidence 8654 45557889999999999999999975443
No 149
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.62 E-value=2e-15 Score=131.31 Aligned_cols=109 Identities=19% Similarity=0.258 Sum_probs=87.2
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHh------cCcCCCCCeEEEEccCCC-CC--CCC
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQ------DNTILTSNLALVRADVCR-LP--FAS 235 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~------~~~~~~~~i~~~~~d~~~-lp--~~~ 235 (333)
.++.+|||||||+|.++..+++..+...++|+|+|+.+++.|++++.. .+ ..++.++++|+.. ++ +++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~---~~nv~~~~~d~~~~l~~~~~~ 121 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGG---FQNIACLRSNAMKHLPNFFYK 121 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCC---CTTEEEEECCTTTCHHHHCCT
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcC---CCeEEEEECcHHHhhhhhCCC
Confidence 345689999999999999999998888999999999999999987653 22 4689999999987 66 678
Q ss_pred CCcceEEeccccccCCC--------hHHHHHHHHHhccCCcEEEEEEec
Q 019957 236 GFVDAVHAGAALHCWPS--------PSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 236 ~~fD~V~~~~vl~h~~d--------~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
++||.|++...-.+... ...+++++.++|||||.|++.+..
T Consensus 122 ~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 122 GQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp TCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 89999987543322111 136899999999999999998754
No 150
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.62 E-value=4.2e-15 Score=135.12 Aligned_cols=116 Identities=14% Similarity=0.147 Sum_probs=98.4
Q ss_pred HHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC
Q 019957 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (333)
Q Consensus 153 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (333)
.....+.+.+...++.+|||||||+|.++..+++.++ ..+|+|+|+|+.+++.+++++...+ ..++.++.+|+.+.
T Consensus 62 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g---~~~v~~~~~d~~~~ 138 (317)
T 1dl5_A 62 SLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG---IENVIFVCGDGYYG 138 (317)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT---CCSEEEEESCGGGC
T ss_pred HHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCeEEEECChhhc
Confidence 3456667777777889999999999999999998866 3569999999999999999998876 45699999999886
Q ss_pred CCCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecc
Q 019957 232 PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
+..+++||+|++..+++|+. +++.++|||||++++.....
T Consensus 139 ~~~~~~fD~Iv~~~~~~~~~------~~~~~~LkpgG~lvi~~~~~ 178 (317)
T 1dl5_A 139 VPEFSPYDVIFVTVGVDEVP------ETWFTQLKEGGRVIVPINLK 178 (317)
T ss_dssp CGGGCCEEEEEECSBBSCCC------HHHHHHEEEEEEEEEEBCBG
T ss_pred cccCCCeEEEEEcCCHHHHH------HHHHHhcCCCcEEEEEECCC
Confidence 55567899999999999987 57889999999999976543
No 151
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.62 E-value=5.6e-15 Score=126.37 Aligned_cols=116 Identities=16% Similarity=0.096 Sum_probs=96.2
Q ss_pred HHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC
Q 019957 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (333)
Q Consensus 153 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (333)
.....+.+.+...++.+|||||||+|.++..+++.+ +..+++++|+++.+++.+++++...+ ..++.++.+|+...
T Consensus 64 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~ 140 (215)
T 2yxe_A 64 HMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLG---YDNVIVIVGDGTLG 140 (215)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHT---CTTEEEEESCGGGC
T ss_pred HHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC---CCCeEEEECCcccC
Confidence 344566666777778899999999999999999885 44699999999999999999988766 45799999998543
Q ss_pred CCCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecc
Q 019957 232 PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
...+++||+|++..+++|++ +++.++|||||++++.....
T Consensus 141 ~~~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 141 YEPLAPYDRIYTTAAGPKIP------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp CGGGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEESSS
T ss_pred CCCCCCeeEEEECCchHHHH------HHHHHHcCCCcEEEEEECCC
Confidence 32367899999999999986 47899999999999988654
No 152
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.62 E-value=7.3e-17 Score=140.72 Aligned_cols=150 Identities=14% Similarity=0.119 Sum_probs=114.0
Q ss_pred HHHHHHhhc-ccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCC
Q 019957 155 FKMAQEYFK-SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (333)
Q Consensus 155 ~~~~~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~ 233 (333)
.+.+...+. ..++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.+++++...++ ..++.++++|+.+++
T Consensus 66 ~~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~~- 140 (241)
T 3gdh_A 66 AEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALTG--MRVIAIDIDPVKIALARNNAEVYGI--ADKIEFICGDFLLLA- 140 (241)
T ss_dssp HHHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTC--GGGEEEEESCHHHHG-
T ss_pred HHHHHHHhhhccCCCEEEECccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCC--CcCeEEEECChHHhc-
Confidence 344444333 2367899999999999999999986 4999999999999999999988763 358999999998876
Q ss_pred CCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCC
Q 019957 234 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCG 313 (333)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aG 313 (333)
.+++||+|++..+++|..++...+.++.++|+|||.+++........... .......+.+++..++...|
T Consensus 141 ~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~~~~~~~~~~~----------~~lp~~~~~~~~~~~l~~~g 210 (241)
T 3gdh_A 141 SFLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIFRLSKKITNNIV----------YFLPRNADIDQVASLAGPGG 210 (241)
T ss_dssp GGCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHHHHHHHHHCSCEE----------EEEETTBCHHHHHHTTCTTC
T ss_pred ccCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeHHHHHHhhCCceE----------EECCCCCCHHHHHHHhccCC
Confidence 56799999999999998888778889999999999966643221110000 01123456788888888888
Q ss_pred CcEEEE
Q 019957 314 LTNYTS 319 (333)
Q Consensus 314 f~~v~~ 319 (333)
...+..
T Consensus 211 ~~~i~~ 216 (241)
T 3gdh_A 211 QVEIEQ 216 (241)
T ss_dssp CEEEEE
T ss_pred CEEEEe
Confidence 766553
No 153
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.61 E-value=3.4e-15 Score=126.83 Aligned_cols=122 Identities=10% Similarity=0.084 Sum_probs=96.7
Q ss_pred cHHHHHHHHHhhccc-CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCC
Q 019957 151 PDEEFKMAQEYFKSA-QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVC 229 (333)
Q Consensus 151 ~~~~~~~~~~~l~~~-~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~ 229 (333)
.+...+.+.+.+... ++.+|||+|||+|.++..++..+ ..+|+|+|+|+.+++.+++++...+ ..++.++++|+.
T Consensus 38 ~~~~~~~l~~~l~~~~~~~~vLDlgcG~G~~~~~l~~~~-~~~V~~vD~s~~~l~~a~~~~~~~~---~~~v~~~~~D~~ 113 (202)
T 2fpo_A 38 TDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRY-AAGATLIEMDRAVSQQLIKNLATLK---AGNARVVNSNAM 113 (202)
T ss_dssp CHHHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTT---CCSEEEECSCHH
T ss_pred HHHHHHHHHHHHHhhcCCCeEEEeCCCcCHHHHHHHhcC-CCEEEEEECCHHHHHHHHHHHHHcC---CCcEEEEECCHH
Confidence 334445555555442 57899999999999999877775 3489999999999999999998876 368999999987
Q ss_pred C-CCCCCCCcceEEeccccccCCChHHHHHHHHH--hccCCcEEEEEEecc
Q 019957 230 R-LPFASGFVDAVHAGAALHCWPSPSNAVAEISR--ILRSGGVFVGTTFLR 277 (333)
Q Consensus 230 ~-lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r--~LkpgG~l~i~~~~~ 277 (333)
+ ++..+++||+|++...+ |..+...+++.+.+ +|+|||++++.....
T Consensus 114 ~~~~~~~~~fD~V~~~~p~-~~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 114 SFLAQKGTPHNIVFVDPPF-RRGLLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp HHHSSCCCCEEEEEECCSS-STTTHHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred HHHhhcCCCCCEEEECCCC-CCCcHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 6 45556789999998763 45677788888876 599999999987654
No 154
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.61 E-value=6.8e-15 Score=127.43 Aligned_cols=136 Identities=7% Similarity=0.042 Sum_probs=108.8
Q ss_pred HHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCC
Q 019957 155 FKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA 234 (333)
Q Consensus 155 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~ 234 (333)
++.+.+++. ++.+|||||||+|.++..+++.++..+|+++|+++.+++.|++++..+|+ ..++.+..+|..+...+
T Consensus 12 L~~i~~~v~--~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl--~~~I~v~~gD~l~~~~~ 87 (244)
T 3gnl_A 12 LEKVASYIT--KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGL--TEQIDVRKGNGLAVIEK 87 (244)
T ss_dssp HHHHHTTCC--SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC--TTTEEEEECSGGGGCCG
T ss_pred HHHHHHhCC--CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--CceEEEEecchhhccCc
Confidence 355666654 36799999999999999999998777899999999999999999999885 56799999999775544
Q ss_pred CCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCC
Q 019957 235 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGL 314 (333)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf 314 (333)
+.+||+|+..++.-. -...+|.+..+.|+++|.|++.... ..+.++++|.+.||
T Consensus 88 ~~~~D~IviagmGg~--lI~~IL~~~~~~L~~~~~lIlq~~~------------------------~~~~lr~~L~~~Gf 141 (244)
T 3gnl_A 88 KDAIDTIVIAGMGGT--LIRTILEEGAAKLAGVTKLILQPNI------------------------AAWQLREWSEQNNW 141 (244)
T ss_dssp GGCCCEEEEEEECHH--HHHHHHHHTGGGGTTCCEEEEEESS------------------------CHHHHHHHHHHHTE
T ss_pred cccccEEEEeCCchH--HHHHHHHHHHHHhCCCCEEEEEcCC------------------------ChHHHHHHHHHCCC
Confidence 446999987554331 1346788889999999999987621 35789999999999
Q ss_pred cEEEEE
Q 019957 315 TNYTSK 320 (333)
Q Consensus 315 ~~v~~~ 320 (333)
.++++.
T Consensus 142 ~i~~E~ 147 (244)
T 3gnl_A 142 LITSEA 147 (244)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 987653
No 155
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.61 E-value=3.7e-15 Score=134.61 Aligned_cols=137 Identities=13% Similarity=0.141 Sum_probs=102.7
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHh--cCcCCCCCeEEEEccCCCCCC--CCCCcce
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQ--DNTILTSNLALVRADVCRLPF--ASGFVDA 240 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~--~~~~~~~~i~~~~~d~~~lp~--~~~~fD~ 240 (333)
.++.+|||||||+|.++..+++..+..+++++|+++.+++.+++++.. .+. ..+++.++.+|+..++. .+++||+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSL-ADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGG-GCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhccc-CCCcEEEEECcHHHHHHhccCCceeE
Confidence 346799999999999999999876567999999999999999998742 111 14689999999977543 3679999
Q ss_pred EEeccccccCCCh----HHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCCcE
Q 019957 241 VHAGAALHCWPSP----SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTN 316 (333)
Q Consensus 241 V~~~~vl~h~~d~----~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf~~ 316 (333)
|++....++.+.. ..+++++.++|||||++++...+.. .. ....+++.+.++++||..
T Consensus 173 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~------~~------------~~~~~~~~~~l~~~GF~~ 234 (304)
T 3bwc_A 173 VIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIW------LD------------LELIEKMSRFIRETGFAS 234 (304)
T ss_dssp EEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTT------TC------------HHHHHHHHHHHHHHTCSE
T ss_pred EEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcc------cc------------hHHHHHHHHHHHhCCCCc
Confidence 9997665554333 5889999999999999999864321 00 113467889999999998
Q ss_pred EEEE
Q 019957 317 YTSK 320 (333)
Q Consensus 317 v~~~ 320 (333)
++..
T Consensus 235 v~~~ 238 (304)
T 3bwc_A 235 VQYA 238 (304)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8764
No 156
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.61 E-value=3.9e-15 Score=136.38 Aligned_cols=122 Identities=17% Similarity=0.199 Sum_probs=93.9
Q ss_pred cHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcC-------cC-CCCCe
Q 019957 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDN-------TI-LTSNL 221 (333)
Q Consensus 151 ~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~-------~~-~~~~i 221 (333)
.......+...+...++.+|||+|||+|.++..+++. ++..+|+++|+++.+++.|++++...+ +. ...++
T Consensus 90 ~~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v 169 (336)
T 2b25_A 90 FPKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNV 169 (336)
T ss_dssp CHHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCE
T ss_pred CHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCce
Confidence 3344566667777778889999999999999999987 666799999999999999999887521 10 02579
Q ss_pred EEEEccCCCC--CCCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecc
Q 019957 222 ALVRADVCRL--PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 222 ~~~~~d~~~l--p~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
.++.+|+.+. ++++++||+|++. .+++..+++++.++|||||.+++..+..
T Consensus 170 ~~~~~d~~~~~~~~~~~~fD~V~~~-----~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 222 (336)
T 2b25_A 170 DFIHKDISGATEDIKSLTFDAVALD-----MLNPHVTLPVFYPHLKHGGVCAVYVVNI 222 (336)
T ss_dssp EEEESCTTCCC-------EEEEEEC-----SSSTTTTHHHHGGGEEEEEEEEEEESSH
T ss_pred EEEECChHHcccccCCCCeeEEEEC-----CCCHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 9999999876 4566789999984 3456668999999999999999888654
No 157
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.61 E-value=9.4e-15 Score=135.74 Aligned_cols=106 Identities=18% Similarity=0.225 Sum_probs=93.2
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEec
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~ 244 (333)
.++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.+++++..+++ .+.++.+|+.+.+..+++||+|+++
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~g~--~V~gvDis~~al~~A~~n~~~~~~----~v~~~~~D~~~~~~~~~~fD~Ii~n 305 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARMGA--EVVGVEDDLASVLSLQKGLEANAL----KAQALHSDVDEALTEEARFDIIVTN 305 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHTTC--EEEEEESBHHHHHHHHHHHHHTTC----CCEEEECSTTTTSCTTCCEEEEEEC
T ss_pred CCCCEEEEEeeeCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcCC----CeEEEEcchhhccccCCCeEEEEEC
Confidence 3577999999999999999999864 999999999999999999888653 4899999999887667899999999
Q ss_pred ccccc-----CCChHHHHHHHHHhccCCcEEEEEEec
Q 019957 245 AALHC-----WPSPSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 245 ~vl~h-----~~d~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
..++| ..+...+++++.++|||||.+++....
T Consensus 306 pp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 306 PPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp CCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred CchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcC
Confidence 99888 445678999999999999999998743
No 158
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.61 E-value=8.6e-15 Score=125.99 Aligned_cols=122 Identities=9% Similarity=0.168 Sum_probs=97.9
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC
Q 019957 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (333)
Q Consensus 152 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (333)
....+.+...+...++.+|||||||+|..+..+++.. +..+|+++|+++.+++.|++++...++ ..++.++.+|+.+
T Consensus 44 ~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~ 121 (221)
T 3u81_A 44 DAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGL--QDKVTILNGASQD 121 (221)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC--GGGEEEEESCHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCC--CCceEEEECCHHH
Confidence 3444555555555667899999999999999999864 366999999999999999999988774 4579999999854
Q ss_pred -CCCC-----CCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEec
Q 019957 231 -LPFA-----SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 231 -lp~~-----~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
++.. .++||+|++....++..+...++..+ ++|||||++++.+..
T Consensus 122 ~l~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 122 LIPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp HGGGTTTTSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred HHHHHHHhcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCC
Confidence 3321 26899999998888877666778888 999999999986644
No 159
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.61 E-value=1.5e-14 Score=124.08 Aligned_cols=140 Identities=11% Similarity=0.120 Sum_probs=110.1
Q ss_pred HHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCC-CCCCC
Q 019957 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVC-RLPFA 234 (333)
Q Consensus 156 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~-~lp~~ 234 (333)
+.+.+++. ++.+|||||||+|.++..+++.++..+|+++|+++.+++.|++++..+++ ..++.++.+|.. .++.
T Consensus 7 ~~l~~~v~--~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl--~~~i~~~~~d~l~~l~~- 81 (225)
T 3kr9_A 7 ELVASFVS--QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGL--KEKIQVRLANGLAAFEE- 81 (225)
T ss_dssp HHHHTTSC--TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC--TTTEEEEECSGGGGCCG-
T ss_pred HHHHHhCC--CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--CceEEEEECchhhhccc-
Confidence 45555554 46799999999999999999998777899999999999999999999885 567999999984 4442
Q ss_pred CCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCC
Q 019957 235 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGL 314 (333)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf 314 (333)
...||+|+..++-..+ ...+|.+....|+++|+|++.... ..+.++++|.++||
T Consensus 82 ~~~~D~IviaG~Gg~~--i~~Il~~~~~~L~~~~~lVlq~~~------------------------~~~~vr~~L~~~Gf 135 (225)
T 3kr9_A 82 TDQVSVITIAGMGGRL--IARILEEGLGKLANVERLILQPNN------------------------REDDLRIWLQDHGF 135 (225)
T ss_dssp GGCCCEEEEEEECHHH--HHHHHHHTGGGCTTCCEEEEEESS------------------------CHHHHHHHHHHTTE
T ss_pred CcCCCEEEEcCCChHH--HHHHHHHHHHHhCCCCEEEEECCC------------------------CHHHHHHHHHHCCC
Confidence 2269999876543211 357788999999999999885521 35789999999999
Q ss_pred cEEEEE---EeCeEE
Q 019957 315 TNYTSK---VQQSFI 326 (333)
Q Consensus 315 ~~v~~~---~~~~~~ 326 (333)
.++++. ..+.|+
T Consensus 136 ~i~~e~lv~e~~~~Y 150 (225)
T 3kr9_A 136 QIVAESILEEAGKFY 150 (225)
T ss_dssp EEEEEEEEEETTEEE
T ss_pred EEEEEEEEEECCEEE
Confidence 998864 355553
No 160
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.61 E-value=1e-14 Score=126.21 Aligned_cols=112 Identities=15% Similarity=0.140 Sum_probs=94.6
Q ss_pred HHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC
Q 019957 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP 232 (333)
Q Consensus 153 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp 232 (333)
.....+.+.+...++.+|||||||+|.++..+++.+ .+++|+|+++.+++.++++.... .++.++.+|+....
T Consensus 57 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~-----~~v~~~~~d~~~~~ 129 (231)
T 1vbf_A 57 NLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYY-----NNIKLILGDGTLGY 129 (231)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTC-----SSEEEEESCGGGCC
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhc-----CCeEEEECCccccc
Confidence 445666777777778899999999999999999987 49999999999999999987653 27999999997733
Q ss_pred CCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecc
Q 019957 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
..+++||+|++..+++|+. .++.++|||||++++.++..
T Consensus 130 ~~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 130 EEEKPYDRVVVWATAPTLL------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp GGGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEECSS
T ss_pred ccCCCccEEEECCcHHHHH------HHHHHHcCCCcEEEEEEcCC
Confidence 3467899999999999986 36889999999999988654
No 161
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.60 E-value=3.8e-15 Score=124.35 Aligned_cols=126 Identities=15% Similarity=0.150 Sum_probs=98.9
Q ss_pred CCcHHHHHHHHHhhcc-cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEcc
Q 019957 149 PGPDEEFKMAQEYFKS-AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRAD 227 (333)
Q Consensus 149 ~~~~~~~~~~~~~l~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d 227 (333)
+..+...+.+.+.+.. .++.+|||+|||+|.++..+++.+ ..+|+|+|+++.+++.+++++...++ ..++.++.+|
T Consensus 26 p~~~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~~~d 102 (187)
T 2fhp_A 26 PTTDKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRG-MDKSICIEKNFAALKVIKENIAITKE--PEKFEVRKMD 102 (187)
T ss_dssp CCCHHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHTC--GGGEEEEESC
T ss_pred cCHHHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHhCC--CcceEEEECc
Confidence 3344555666666643 467899999999999999888764 45999999999999999999887763 3579999999
Q ss_pred CCCCC----CCCCCcceEEeccccccCCChHHHHHHH--HHhccCCcEEEEEEeccc
Q 019957 228 VCRLP----FASGFVDAVHAGAALHCWPSPSNAVAEI--SRILRSGGVFVGTTFLRY 278 (333)
Q Consensus 228 ~~~lp----~~~~~fD~V~~~~vl~h~~d~~~~l~~~--~r~LkpgG~l~i~~~~~~ 278 (333)
+.+.. +.+++||+|++...++ ..+....++.+ .++|||||.+++..+...
T Consensus 103 ~~~~~~~~~~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 103 ANRALEQFYEEKLQFDLVLLDPPYA-KQEIVSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCGG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred HHHHHHHHHhcCCCCCEEEECCCCC-chhHHHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 87632 2267899999987744 45667778888 889999999999887653
No 162
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.60 E-value=2.2e-14 Score=126.62 Aligned_cols=117 Identities=14% Similarity=0.102 Sum_probs=94.0
Q ss_pred HHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHh---cCcCCCCCeEEEEccCCCC--
Q 019957 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQ---DNTILTSNLALVRADVCRL-- 231 (333)
Q Consensus 157 ~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~---~~~~~~~~i~~~~~d~~~l-- 231 (333)
.+..++...++.+|||+|||+|.++..++..++..+++|+|+++.+++.|++++.. +++ ..++.++.+|+.+.
T Consensus 27 lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l--~~~v~~~~~D~~~~~~ 104 (260)
T 2ozv_A 27 LLASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAF--SARIEVLEADVTLRAK 104 (260)
T ss_dssp HHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTT--GGGEEEEECCTTCCHH
T ss_pred HHHHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCC--cceEEEEeCCHHHHhh
Confidence 34455555567799999999999999999998777999999999999999999877 653 44699999999886
Q ss_pred -----CCCCCCcceEEecccccc------------------CCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 232 -----PFASGFVDAVHAGAALHC------------------WPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 232 -----p~~~~~fD~V~~~~vl~h------------------~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
++.+++||+|+++-.+.. ..+...+++.+.++|||||.+++..+
T Consensus 105 ~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 105 ARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp HHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 255789999999732221 12357889999999999999998653
No 163
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.60 E-value=1.5e-15 Score=125.95 Aligned_cols=121 Identities=16% Similarity=0.157 Sum_probs=94.8
Q ss_pred HHHHHHHhhc-ccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC-C
Q 019957 154 EFKMAQEYFK-SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-L 231 (333)
Q Consensus 154 ~~~~~~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-l 231 (333)
..+.+.+.+. ..++.+|||+|||+|.++..+++.+ ..+++|+|+++.+++.+++++...++ ..++.++.+|+.+ +
T Consensus 18 ~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~~ 94 (177)
T 2esr_A 18 VRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRG-MSAAVLVEKNRKAQAIIQDNIIMTKA--ENRFTLLKMEAERAI 94 (177)
T ss_dssp CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTT-CCEEEEECCCHHHHHHHHHHHHTTTC--GGGEEEECSCHHHHH
T ss_pred HHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHcCC--CCceEEEECcHHHhH
Confidence 3455555555 4567899999999999999998874 45999999999999999999988764 3579999999876 3
Q ss_pred CCCCCCcceEEeccccccCCChHHHHHHHH--HhccCCcEEEEEEeccc
Q 019957 232 PFASGFVDAVHAGAALHCWPSPSNAVAEIS--RILRSGGVFVGTTFLRY 278 (333)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~~~~l~~~~--r~LkpgG~l~i~~~~~~ 278 (333)
+..+++||+|++...+++ .+....++.+. ++|||||++++.+....
T Consensus 95 ~~~~~~fD~i~~~~~~~~-~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 95 DCLTGRFDLVFLDPPYAK-ETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp HHBCSCEEEEEECCSSHH-HHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred HhhcCCCCEEEECCCCCc-chHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 433567999999866532 34456677776 99999999999887653
No 164
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.60 E-value=6.4e-15 Score=135.35 Aligned_cols=119 Identities=18% Similarity=0.243 Sum_probs=99.5
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC
Q 019957 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (333)
Q Consensus 152 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (333)
+...+.+.+.+...++.+|||+|||+|.++..+++.++..+++++|+|+.+++.+++++...++ .+.++.+|+...
T Consensus 182 d~~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~----~~~~~~~d~~~~ 257 (343)
T 2pjd_A 182 DVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGV----EGEVFASNVFSE 257 (343)
T ss_dssp CHHHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTC----CCEEEECSTTTT
T ss_pred cHHHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC----CCEEEEcccccc
Confidence 3445667777755567799999999999999999998777999999999999999999887653 467788898765
Q ss_pred CCCCCCcceEEecccccc-----CCChHHHHHHHHHhccCCcEEEEEEec
Q 019957 232 PFASGFVDAVHAGAALHC-----WPSPSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 232 p~~~~~fD~V~~~~vl~h-----~~d~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
+ +++||+|+++.++|+ ..+...+++++.++|||||.+++....
T Consensus 258 ~--~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 258 V--KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp C--CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred c--cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 4 679999999998875 345678999999999999999998754
No 165
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.60 E-value=6.3e-15 Score=127.91 Aligned_cols=120 Identities=11% Similarity=0.181 Sum_probs=98.3
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC
Q 019957 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (333)
Q Consensus 152 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (333)
....+.+...+...++.+|||||||+|..+..+++..+..+|+++|+++.+++.|+++++..++ ..++.++.+|+.+.
T Consensus 57 ~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~ 134 (232)
T 3ntv_A 57 RLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHF--ENQVRIIEGNALEQ 134 (232)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTC--TTTEEEEESCGGGC
T ss_pred HHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEECCHHHH
Confidence 3444566666666678899999999999999999976677999999999999999999988774 45899999999764
Q ss_pred -C-CCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEec
Q 019957 232 -P-FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 232 -p-~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
+ ..+++||+|++... ..+...+++++.++|||||+|++....
T Consensus 135 ~~~~~~~~fD~V~~~~~---~~~~~~~l~~~~~~LkpgG~lv~d~~~ 178 (232)
T 3ntv_A 135 FENVNDKVYDMIFIDAA---KAQSKKFFEIYTPLLKHQGLVITDNVL 178 (232)
T ss_dssp HHHHTTSCEEEEEEETT---SSSHHHHHHHHGGGEEEEEEEEEECTT
T ss_pred HHhhccCCccEEEEcCc---HHHHHHHHHHHHHhcCCCeEEEEeeCC
Confidence 3 33679999997654 445678899999999999999885543
No 166
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.60 E-value=7.6e-15 Score=133.21 Aligned_cols=122 Identities=16% Similarity=0.161 Sum_probs=96.6
Q ss_pred HHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC
Q 019957 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (333)
Q Consensus 153 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (333)
.....+...+...++.+|||+|||+|..+..+++..+ ..+|+++|+++.+++.++++++..+ ..++.++.+|+..+
T Consensus 105 ~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g---~~~v~~~~~D~~~~ 181 (315)
T 1ixk_A 105 ASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLG---VLNVILFHSSSLHI 181 (315)
T ss_dssp HHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHT---CCSEEEESSCGGGG
T ss_pred HHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhC---CCeEEEEECChhhc
Confidence 3334555667777888999999999999999998743 4689999999999999999998877 45799999999887
Q ss_pred CCCCCCcceEEec------cccccCCCh----------------HHHHHHHHHhccCCcEEEEEEecc
Q 019957 232 PFASGFVDAVHAG------AALHCWPSP----------------SNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 232 p~~~~~fD~V~~~------~vl~h~~d~----------------~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
+..+++||+|++. +++.+.++. ..+|+++.++|||||++++.+...
T Consensus 182 ~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 182 GELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp GGGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred ccccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 6556789999983 344443321 478999999999999999988543
No 167
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.60 E-value=1.3e-14 Score=132.38 Aligned_cols=113 Identities=18% Similarity=0.273 Sum_probs=94.1
Q ss_pred HHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCC
Q 019957 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG 236 (333)
Q Consensus 157 ~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~ 236 (333)
.+.+.+...++.+|||||||+|.++..+++.+ ..+|+|+|++ .+++.|++++..+++ ..++.++.+|+.+++++++
T Consensus 29 ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~g-~~~v~~vD~s-~~~~~a~~~~~~~~~--~~~i~~~~~d~~~~~~~~~ 104 (328)
T 1g6q_1 29 AIIQNKDLFKDKIVLDVGCGTGILSMFAAKHG-AKHVIGVDMS-SIIEMAKELVELNGF--SDKITLLRGKLEDVHLPFP 104 (328)
T ss_dssp HHHHHHHHHTTCEEEEETCTTSHHHHHHHHTC-CSEEEEEESS-THHHHHHHHHHHTTC--TTTEEEEESCTTTSCCSSS
T ss_pred HHHhhHhhcCCCEEEEecCccHHHHHHHHHCC-CCEEEEEChH-HHHHHHHHHHHHcCC--CCCEEEEECchhhccCCCC
Confidence 34334444567899999999999999999875 4589999999 599999999888775 5679999999999887778
Q ss_pred CcceEEecc---ccccCCChHHHHHHHHHhccCCcEEEEE
Q 019957 237 FVDAVHAGA---ALHCWPSPSNAVAEISRILRSGGVFVGT 273 (333)
Q Consensus 237 ~fD~V~~~~---vl~h~~d~~~~l~~~~r~LkpgG~l~i~ 273 (333)
+||+|++.. .+.+..++..++.++.++|||||.++..
T Consensus 105 ~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 105 KVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp CEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred cccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 999999874 4556677889999999999999999843
No 168
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.59 E-value=1.9e-14 Score=118.50 Aligned_cols=100 Identities=21% Similarity=0.251 Sum_probs=86.0
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC--------CC
Q 019957 164 SAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--------FA 234 (333)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp--------~~ 234 (333)
..++.+|||+|||+|.++..+++. ++..+++|+|+++ +++ ..++.++.+|+.+.+ ++
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~-------------~~~~~~~~~d~~~~~~~~~~~~~~~ 85 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP-------------IVGVDFLQGDFRDELVMKALLERVG 85 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC-------------CTTEEEEESCTTSHHHHHHHHHHHT
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc-------------cCcEEEEEcccccchhhhhhhccCC
Confidence 456789999999999999999988 5557999999999 642 347899999998876 66
Q ss_pred CCCcceEEeccccccCCCh-----------HHHHHHHHHhccCCcEEEEEEecc
Q 019957 235 SGFVDAVHAGAALHCWPSP-----------SNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~-----------~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
+++||+|++..++++..++ ..+++++.++|+|||.+++.++..
T Consensus 86 ~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 86 DSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp TCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred CCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 7899999999999888776 688999999999999999988654
No 169
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.59 E-value=2.1e-15 Score=123.93 Aligned_cols=120 Identities=16% Similarity=0.190 Sum_probs=94.6
Q ss_pred cHHHHHHHHHhhccc--CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccC
Q 019957 151 PDEEFKMAQEYFKSA--QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV 228 (333)
Q Consensus 151 ~~~~~~~~~~~l~~~--~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~ 228 (333)
.....+.+.+.+... ++.+|||+|||+|.++..+++.++ .++|+|+|+.+++.+++++...+ . ++.++.+|+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~~---~-~~~~~~~d~ 97 (171)
T 1ws6_A 24 PVRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGW--EAVLVEKDPEAVRLLKENVRRTG---L-GARVVALPV 97 (171)
T ss_dssp CHHHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTTC--EEEEECCCHHHHHHHHHHHHHHT---C-CCEEECSCH
T ss_pred HHHHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHHcC---C-ceEEEeccH
Confidence 344445555555432 577999999999999999999886 69999999999999999988765 3 789999998
Q ss_pred CCC-C-CC--CCCcceEEeccccccCCChHHHHHHHH--HhccCCcEEEEEEeccc
Q 019957 229 CRL-P-FA--SGFVDAVHAGAALHCWPSPSNAVAEIS--RILRSGGVFVGTTFLRY 278 (333)
Q Consensus 229 ~~l-p-~~--~~~fD~V~~~~vl~h~~d~~~~l~~~~--r~LkpgG~l~i~~~~~~ 278 (333)
.+. + .. .++||+|++..+++ .+....++.+. ++|||||.+++.++...
T Consensus 98 ~~~~~~~~~~~~~~D~i~~~~~~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 98 EVFLPEAKAQGERFTVAFMAPPYA--MDLAALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCTT--SCTTHHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred HHHHHhhhccCCceEEEEECCCCc--hhHHHHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 763 2 11 34899999987765 55666777777 99999999999887654
No 170
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.58 E-value=6.2e-15 Score=129.54 Aligned_cols=147 Identities=12% Similarity=0.059 Sum_probs=99.0
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC---CCC---CCCcc
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL---PFA---SGFVD 239 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l---p~~---~~~fD 239 (333)
++.+|||+|||+|.++..++...+..+++|+|+|+.+++.|++++...++ ..++.++.+|+.+. ++. +++||
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNL--SDLIKVVKVPQKTLLMDALKEESEIIYD 142 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCTTCSSTTTSTTCCSCCBS
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCC--CccEEEEEcchhhhhhhhhhcccCCccc
Confidence 46799999999999999888875456999999999999999999988764 44699999997652 344 26899
Q ss_pred eEEeccccccCC--------------Ch-HHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHH-h--hhccCCCCC
Q 019957 240 AVHAGAALHCWP--------------SP-SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRE-R--ILQNYNYLT 301 (333)
Q Consensus 240 ~V~~~~vl~h~~--------------d~-~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~t 301 (333)
+|+++-.+++.. .+ ..++.++.++|||||.+.+...... ........ . ........+
T Consensus 143 ~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~-----~~~~~l~~~g~~~~~~~~~~~ 217 (254)
T 2h00_A 143 FCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIH-----DSLQLKKRLRWYSCMLGKKCS 217 (254)
T ss_dssp EEEECCCCC-------------------------CTTTTHHHHTHHHHHHHHHH-----HHHHHGGGBSCEEEEESSTTS
T ss_pred EEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHH-----HHHhcccceEEEEECCCChhH
Confidence 999985554432 11 2456788999999998876542110 00000000 0 001222334
Q ss_pred HHHHHHHHHhCCCcEEEE
Q 019957 302 EEEIEDLCTSCGLTNYTS 319 (333)
Q Consensus 302 ~~~l~~ll~~aGf~~v~~ 319 (333)
.+++.++++++||+.++.
T Consensus 218 ~~~~~~~l~~~Gf~~v~~ 235 (254)
T 2h00_A 218 LAPLKEELRIQGVPKVTY 235 (254)
T ss_dssp HHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHcCCCceEE
Confidence 488999999999998764
No 171
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.58 E-value=9.2e-15 Score=135.90 Aligned_cols=116 Identities=17% Similarity=0.210 Sum_probs=95.8
Q ss_pred HHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCC
Q 019957 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (333)
Q Consensus 156 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (333)
+.+.......++.+|||||||+|.++..+++.+ ..+|+|+|+| .+++.|+++++.+++ ..++.++.+|+.+++++
T Consensus 53 ~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g-~~~V~gvD~s-~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~- 127 (376)
T 3r0q_C 53 NAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAG-ARKVYAVEAT-KMADHARALVKANNL--DHIVEVIEGSVEDISLP- 127 (376)
T ss_dssp HHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTT-CSEEEEEESS-TTHHHHHHHHHHTTC--TTTEEEEESCGGGCCCS-
T ss_pred HHHHhccccCCCCEEEEeccCcCHHHHHHHhcC-CCEEEEEccH-HHHHHHHHHHHHcCC--CCeEEEEECchhhcCcC-
Confidence 334444455678899999999999999999986 4599999999 999999999988875 56799999999998876
Q ss_pred CCcceEEeccccccC---CChHHHHHHHHHhccCCcEEEEEEec
Q 019957 236 GFVDAVHAGAALHCW---PSPSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 236 ~~fD~V~~~~vl~h~---~d~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
++||+|++..+.+++ .++..+++++.++|||||++++....
T Consensus 128 ~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~~ 171 (376)
T 3r0q_C 128 EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHAR 171 (376)
T ss_dssp SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEEE
T ss_pred CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecCe
Confidence 799999996544443 56788999999999999999886544
No 172
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.58 E-value=8.2e-16 Score=133.43 Aligned_cols=144 Identities=16% Similarity=0.113 Sum_probs=88.1
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEE-ccCCCCCCCCCCcceEEe
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVR-ADVCRLPFASGFVDAVHA 243 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~-~d~~~lp~~~~~fD~V~~ 243 (333)
.++.+|||||||+|.++..+++.+ ..+|+|+|+|+.|++.++++..........++.+.. .++....+....||++++
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~g-~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~ 114 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQNG-AKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFI 114 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSS
T ss_pred CCCCEEEEEccCCCHHHHHHHhcC-CCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhh
Confidence 346799999999999999999885 349999999999999877642211000011222222 222221122334555443
Q ss_pred ccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHH-hh--hccCCCCCHHHHHHHHHhCCCcEEEEE
Q 019957 244 GAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRE-RI--LQNYNYLTEEEIEDLCTSCGLTNYTSK 320 (333)
Q Consensus 244 ~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~t~~~l~~ll~~aGf~~v~~~ 320 (333)
+ + ..+++++.++|||||.+++....... .. ...+.. .. ..+.+..+.+++.++++++||+++...
T Consensus 115 ~-----l---~~~l~~i~rvLkpgG~lv~~~~p~~e--~~--~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~ 182 (232)
T 3opn_A 115 S-----L---DLILPPLYEILEKNGEVAALIKPQFE--AG--REQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLT 182 (232)
T ss_dssp C-----G---GGTHHHHHHHSCTTCEEEEEECHHHH--SC--HHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEE
T ss_pred h-----H---HHHHHHHHHhccCCCEEEEEECcccc--cC--HHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEE
Confidence 3 2 67899999999999999986411100 00 000000 00 012233578999999999999988764
Q ss_pred E
Q 019957 321 V 321 (333)
Q Consensus 321 ~ 321 (333)
.
T Consensus 183 ~ 183 (232)
T 3opn_A 183 F 183 (232)
T ss_dssp E
T ss_pred E
Confidence 3
No 173
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.58 E-value=1.3e-14 Score=125.97 Aligned_cols=114 Identities=14% Similarity=0.145 Sum_probs=94.8
Q ss_pred HHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC
Q 019957 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP 232 (333)
Q Consensus 153 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp 232 (333)
.....+.+.+...++.+|||||||+|.++..+++.++ .+|+++|+++.+++.+++++...+ ..++.++.+|+ ..+
T Consensus 78 ~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~---~~~v~~~~~d~-~~~ 152 (235)
T 1jg1_A 78 HMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAG---VKNVHVILGDG-SKG 152 (235)
T ss_dssp HHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTT---CCSEEEEESCG-GGC
T ss_pred HHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcC---CCCcEEEECCc-ccC
Confidence 3455666677777788999999999999999999874 699999999999999999988776 45699999997 334
Q ss_pred CCC-CCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecc
Q 019957 233 FAS-GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 233 ~~~-~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
+++ ..||+|++..+++++.+ ++.++|||||++++..+..
T Consensus 153 ~~~~~~fD~Ii~~~~~~~~~~------~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 153 FPPKAPYDVIIVTAGAPKIPE------PLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp CGGGCCEEEEEECSBBSSCCH------HHHHTEEEEEEEEEEECSS
T ss_pred CCCCCCccEEEECCcHHHHHH------HHHHhcCCCcEEEEEEecC
Confidence 433 35999999999998863 6889999999999988754
No 174
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.58 E-value=1.2e-14 Score=125.93 Aligned_cols=120 Identities=15% Similarity=0.172 Sum_probs=99.6
Q ss_pred cHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC
Q 019957 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (333)
Q Consensus 151 ~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (333)
.......+...+...++.+|||||||+|.++..+++..+..+++++|+++.+++.|++++...++ ..++.++.+|+..
T Consensus 39 ~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~ 116 (233)
T 2gpy_A 39 DLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGL--ESRIELLFGDALQ 116 (233)
T ss_dssp CHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTC--TTTEEEECSCGGG
T ss_pred CHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEECCHHH
Confidence 34445666666666678899999999999999999987667999999999999999999988764 4579999999977
Q ss_pred C-CCC--CCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 231 L-PFA--SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 231 l-p~~--~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
. +.. +++||+|++....+ +...+++++.++|||||++++.+.
T Consensus 117 ~~~~~~~~~~fD~I~~~~~~~---~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 117 LGEKLELYPLFDVLFIDAAKG---QYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp SHHHHTTSCCEEEEEEEGGGS---CHHHHHHHHGGGEEEEEEEEEETT
T ss_pred HHHhcccCCCccEEEECCCHH---HHHHHHHHHHHHcCCCeEEEEEcC
Confidence 4 432 57899999987754 678899999999999999999754
No 175
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.57 E-value=8e-15 Score=130.50 Aligned_cols=142 Identities=14% Similarity=0.204 Sum_probs=96.0
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEE-EccCCCCC---CCCCCcce
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV-RADVCRLP---FASGFVDA 240 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~-~~d~~~lp---~~~~~fD~ 240 (333)
.++.+|||||||||.++..+++.+ ..+|+|+|+|+.|++.+.+. .+++... ..++..++ ++..+||+
T Consensus 84 ~~g~~vLDiGcGTG~~t~~L~~~g-a~~V~aVDvs~~mL~~a~r~--------~~rv~~~~~~ni~~l~~~~l~~~~fD~ 154 (291)
T 3hp7_A 84 VEDMITIDIGASTGGFTDVMLQNG-AKLVYAVDVGTNQLVWKLRQ--------DDRVRSMEQYNFRYAEPVDFTEGLPSF 154 (291)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSSSCSCHHHHT--------CTTEEEECSCCGGGCCGGGCTTCCCSE
T ss_pred ccccEEEecCCCccHHHHHHHhCC-CCEEEEEECCHHHHHHHHHh--------CcccceecccCceecchhhCCCCCCCE
Confidence 356799999999999999998885 45899999999999885442 2343322 23443332 23446999
Q ss_pred EEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhh--hccCCCCCHHHHHHHHHhCCCcEEE
Q 019957 241 VHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERI--LQNYNYLTEEEIEDLCTSCGLTNYT 318 (333)
Q Consensus 241 V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~t~~~l~~ll~~aGf~~v~ 318 (333)
|++..+++++ ..+|.++.++|||||.+++..-............ ... ....+....+++..+++++||.+..
T Consensus 155 v~~d~sf~sl---~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~---~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~ 228 (291)
T 3hp7_A 155 ASIDVSFISL---NLILPALAKILVDGGQVVALVKPQFEAGREQIGK---NGIVRESSIHEKVLETVTAFAVDYGFSVKG 228 (291)
T ss_dssp EEECCSSSCG---GGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC----CCCCCCHHHHHHHHHHHHHHHHHTTEEEEE
T ss_pred EEEEeeHhhH---HHHHHHHHHHcCcCCEEEEEECcccccChhhcCC---CCccCCHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 9998887754 7789999999999999998642111000000000 000 0123345778999999999999887
Q ss_pred EEE
Q 019957 319 SKV 321 (333)
Q Consensus 319 ~~~ 321 (333)
...
T Consensus 229 ~~~ 231 (291)
T 3hp7_A 229 LDF 231 (291)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 176
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.57 E-value=1.7e-14 Score=126.28 Aligned_cols=104 Identities=19% Similarity=0.351 Sum_probs=87.7
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc--------CcCCCCCeEEEEccCCC-CC--C
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--------NTILTSNLALVRADVCR-LP--F 233 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~--------~~~~~~~i~~~~~d~~~-lp--~ 233 (333)
.++.+|||||||+|.++..+++.++...++|+|+|+.+++.+++++... + ..++.++.+|+.+ ++ +
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~---~~nv~~~~~D~~~~l~~~~ 124 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHG---FQNINVLRGNAMKFLPNFF 124 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCST---TTTEEEEECCTTSCGGGTS
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccC---CCcEEEEeccHHHHHHHhc
Confidence 3567899999999999999999988778999999999999999987754 4 4589999999986 55 6
Q ss_pred CCCCcceEEeccccccCCCh-------------HHHHHHHHHhccCCcEEEEEEec
Q 019957 234 ASGFVDAVHAGAALHCWPSP-------------SNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~-------------~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
.++++|.|+.. +++| ..+++++.++|||||.|++.+..
T Consensus 125 ~~~~~d~v~~~-----~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~ 175 (246)
T 2vdv_E 125 EKGQLSKMFFC-----FPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDV 175 (246)
T ss_dssp CTTCEEEEEEE-----SCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cccccCEEEEE-----CCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEecc
Confidence 67889998853 3454 47999999999999999997643
No 177
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.57 E-value=1.6e-14 Score=126.65 Aligned_cols=121 Identities=12% Similarity=0.138 Sum_probs=96.3
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC
Q 019957 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (333)
Q Consensus 152 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (333)
....+.+..++...++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++...++ ..++.++.+|+.+
T Consensus 49 ~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~--~~~v~~~~~d~~~ 126 (248)
T 3tfw_A 49 ANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGV--DQRVTLREGPALQ 126 (248)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTC--TTTEEEEESCHHH
T ss_pred HHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHHH
Confidence 33444455444556678999999999999999999865 67999999999999999999988775 4689999999865
Q ss_pred -CCCC--CCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecc
Q 019957 231 -LPFA--SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 231 -lp~~--~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
++.. .++||+|++... ..+...+++++.++|||||+|++.+...
T Consensus 127 ~l~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~~~~~~ 173 (248)
T 3tfw_A 127 SLESLGECPAFDLIFIDAD---KPNNPHYLRWALRYSRPGTLIIGDNVVR 173 (248)
T ss_dssp HHHTCCSCCCCSEEEECSC---GGGHHHHHHHHHHTCCTTCEEEEECCSG
T ss_pred HHHhcCCCCCeEEEEECCc---hHHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 3322 348999998654 3345678999999999999999876543
No 178
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.57 E-value=1.7e-14 Score=132.82 Aligned_cols=116 Identities=18% Similarity=0.234 Sum_probs=96.7
Q ss_pred HHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCC
Q 019957 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (333)
Q Consensus 156 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (333)
+.+.+.+...++.+|||||||+|.++..+++.+ ..+|+|+|+|+ +++.++++++.+++ ..++.++.+|+.+++++
T Consensus 40 ~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~~vD~s~-~~~~a~~~~~~~~l--~~~v~~~~~d~~~~~~~- 114 (348)
T 2y1w_A 40 RAILQNHTDFKDKIVLDVGCGSGILSFFAAQAG-ARKIYAVEAST-MAQHAEVLVKSNNL--TDRIVVIPGKVEEVSLP- 114 (348)
T ss_dssp HHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEECST-HHHHHHHHHHHTTC--TTTEEEEESCTTTCCCS-
T ss_pred HHHHhccccCCcCEEEEcCCCccHHHHHHHhCC-CCEEEEECCHH-HHHHHHHHHHHcCC--CCcEEEEEcchhhCCCC-
Confidence 445555666678899999999999999999874 46999999996 88999999888774 47899999999988765
Q ss_pred CCcceEEeccccccCCC--hHHHHHHHHHhccCCcEEEEEEec
Q 019957 236 GFVDAVHAGAALHCWPS--PSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 236 ~~fD~V~~~~vl~h~~d--~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
++||+|++..+++|+.+ ....+.+++++|||||.+++....
T Consensus 115 ~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (348)
T 2y1w_A 115 EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIGD 157 (348)
T ss_dssp SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCEEE
T ss_pred CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEecCc
Confidence 58999999999888754 457888999999999999876543
No 179
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.57 E-value=5.1e-14 Score=129.91 Aligned_cols=125 Identities=20% Similarity=0.072 Sum_probs=102.9
Q ss_pred CCCcHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEc
Q 019957 148 FPGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRA 226 (333)
Q Consensus 148 ~~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~ 226 (333)
.+..+.....+.......++.+|||+|||+|.++..++..+ +..+++|+|+++.+++.|+++++..|+ .++.++++
T Consensus 185 a~l~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~---~~i~~~~~ 261 (354)
T 3tma_A 185 GSLTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGL---SWIRFLRA 261 (354)
T ss_dssp CSCCHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTC---TTCEEEEC
T ss_pred CCcCHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCC---CceEEEeC
Confidence 34556666777777777778899999999999999999976 667999999999999999999998874 38999999
Q ss_pred cCCCCCCCCCCcceEEeccccccCCC--------hHHHHHHHHHhccCCcEEEEEEe
Q 019957 227 DVCRLPFASGFVDAVHAGAALHCWPS--------PSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 227 d~~~lp~~~~~fD~V~~~~vl~h~~d--------~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
|+.+++...+.||+|+++-....... ...+++++.++|||||.+++.++
T Consensus 262 D~~~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 262 DARHLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp CGGGGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred ChhhCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 99998876778999999654432111 25789999999999999999885
No 180
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.57 E-value=2.2e-14 Score=123.36 Aligned_cols=121 Identities=15% Similarity=0.113 Sum_probs=95.8
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC
Q 019957 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (333)
Q Consensus 152 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (333)
....+.+..++...++.+|||||||+|..+..+++..+ ..+++++|+++.+++.+++++...++ ..++.++.+|+.+
T Consensus 44 ~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~ 121 (223)
T 3duw_A 44 PTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANL--NDRVEVRTGLALD 121 (223)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCHHH
T ss_pred HHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHHH
Confidence 44445555555556778999999999999999999865 56999999999999999999988774 4579999999865
Q ss_pred C-C-CC---CCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecc
Q 019957 231 L-P-FA---SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 231 l-p-~~---~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
. + +. .++||+|++..... +...+++++.++|||||++++.+...
T Consensus 122 ~~~~~~~~~~~~fD~v~~d~~~~---~~~~~l~~~~~~L~pgG~lv~~~~~~ 170 (223)
T 3duw_A 122 SLQQIENEKYEPFDFIFIDADKQ---NNPAYFEWALKLSRPGTVIIGDNVVR 170 (223)
T ss_dssp HHHHHHHTTCCCCSEEEECSCGG---GHHHHHHHHHHTCCTTCEEEEESCSG
T ss_pred HHHHHHhcCCCCcCEEEEcCCcH---HHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 3 2 11 15799999876533 45688999999999999988876543
No 181
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.56 E-value=7.2e-14 Score=121.98 Aligned_cols=116 Identities=12% Similarity=0.100 Sum_probs=97.5
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC
Q 019957 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (333)
Q Consensus 152 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (333)
......+...+...++.+|||+|||+|.++..+++. ..+++++|+++.+++.++++....++ ..++.++.+|+.+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~ 152 (248)
T 2yvl_A 77 PKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNL--GKNVKFFNVDFKDA 152 (248)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTC--CTTEEEECSCTTTS
T ss_pred chhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCC--CCcEEEEEcChhhc
Confidence 334456677777777889999999999999999988 44999999999999999999887663 46899999999875
Q ss_pred CCCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEec
Q 019957 232 PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
.+.+++||+|++ +.+++..+++++.++|||||.+++.++.
T Consensus 153 ~~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 153 EVPEGIFHAAFV-----DVREPWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp CCCTTCBSEEEE-----CSSCGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred ccCCCcccEEEE-----CCcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 435678999997 4568888999999999999999998864
No 182
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.56 E-value=6.4e-15 Score=128.24 Aligned_cols=133 Identities=12% Similarity=0.080 Sum_probs=99.3
Q ss_pred HHHHHhhcccCCCeEEEEcCCcCHHHHHHHHh----CCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC
Q 019957 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS----GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (333)
Q Consensus 156 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~----~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (333)
..+...+...++.+|||||||+|..+..+++. ++..+|+|+|+++.+++.|+. . ..++.++++|+.+.
T Consensus 71 ~~l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~---~-----~~~v~~~~gD~~~~ 142 (236)
T 2bm8_A 71 AVYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS---D-----MENITLHQGDCSDL 142 (236)
T ss_dssp HHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG---G-----CTTEEEEECCSSCS
T ss_pred HHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc---c-----CCceEEEECcchhH
Confidence 34444444445679999999999999999987 566799999999999887762 1 46899999999874
Q ss_pred ---CCCC-CCcceEEeccccccCCChHHHHHHHHH-hccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHH
Q 019957 232 ---PFAS-GFVDAVHAGAALHCWPSPSNAVAEISR-ILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIE 306 (333)
Q Consensus 232 ---p~~~-~~fD~V~~~~vl~h~~d~~~~l~~~~r-~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~ 306 (333)
+..+ .+||+|++... | .+...++.++.+ +|||||++++.+.. + .+. .++.+.+.
T Consensus 143 ~~l~~~~~~~fD~I~~d~~--~-~~~~~~l~~~~r~~LkpGG~lv~~d~~------~----~~~--------~~~~~~~~ 201 (236)
T 2bm8_A 143 TTFEHLREMAHPLIFIDNA--H-ANTFNIMKWAVDHLLEEGDYFIIEDMI------P----YWY--------RYAPQLFS 201 (236)
T ss_dssp GGGGGGSSSCSSEEEEESS--C-SSHHHHHHHHHHHTCCTTCEEEECSCH------H----HHH--------HHCHHHHH
T ss_pred HHHHhhccCCCCEEEECCc--h-HhHHHHHHHHHHhhCCCCCEEEEEeCc------c----ccc--------ccCHHHHH
Confidence 5433 47999998765 4 377889999997 99999999997641 0 011 12345788
Q ss_pred HHHHhC--CCcEE
Q 019957 307 DLCTSC--GLTNY 317 (333)
Q Consensus 307 ~ll~~a--Gf~~v 317 (333)
+++++. +|+..
T Consensus 202 ~~l~~~~~~f~~~ 214 (236)
T 2bm8_A 202 EYLGAFRDVLSMD 214 (236)
T ss_dssp HHHHTTTTTEEEE
T ss_pred HHHHhCcccEEEc
Confidence 888887 56654
No 183
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.56 E-value=2e-14 Score=134.81 Aligned_cols=125 Identities=11% Similarity=0.017 Sum_probs=97.7
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHH-------HHHHHhcCcCCCCCeEEE
Q 019957 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQC-------YDFIKQDNTILTSNLALV 224 (333)
Q Consensus 152 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a-------~~~~~~~~~~~~~~i~~~ 224 (333)
...+..+.+.+...++.+|||||||+|.++..+++..+..+|+|+|+++.+++.| ++++...|+. ..++.++
T Consensus 228 p~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~-~~nV~~i 306 (433)
T 1u2z_A 228 PNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMR-LNNVEFS 306 (433)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBC-CCCEEEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCC-CCceEEE
Confidence 3455666677777778899999999999999999875455899999999999888 8877776530 2589999
Q ss_pred EccCCCC--CC--CCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEeccc
Q 019957 225 RADVCRL--PF--ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRY 278 (333)
Q Consensus 225 ~~d~~~l--p~--~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~ 278 (333)
.+|.... ++ ..++||+|+++.++ +.+++...|+++.++|||||++++.++..+
T Consensus 307 ~gD~~~~~~~~~~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG~lVi~d~f~p 363 (433)
T 1u2z_A 307 LKKSFVDNNRVAELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGCKIISLKSLRS 363 (433)
T ss_dssp ESSCSTTCHHHHHHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTCEEEESSCSSC
T ss_pred EcCccccccccccccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCeEEEEeeccCC
Confidence 8765432 22 24689999998776 446778889999999999999999865543
No 184
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.55 E-value=2e-14 Score=123.84 Aligned_cols=105 Identities=14% Similarity=0.151 Sum_probs=87.2
Q ss_pred CCeEEEEcCCcCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhcCcCCC-CCeEEEEccCCCC-C-CCCCCcceEE
Q 019957 167 GGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILT-SNLALVRADVCRL-P-FASGFVDAVH 242 (333)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~-~~i~~~~~d~~~l-p-~~~~~fD~V~ 242 (333)
+.+|||||||+|..+..+++.. ++.+++++|+++.+++.|+++++..++ . .++.++.+|+.+. + +.+++||+|+
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~--~~~~i~~~~gda~~~l~~~~~~~fD~V~ 134 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGY--SPSRVRFLLSRPLDVMSRLANDSYQLVF 134 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTC--CGGGEEEECSCHHHHGGGSCTTCEEEEE
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CcCcEEEEEcCHHHHHHHhcCCCcCeEE
Confidence 3499999999999999999874 367999999999999999999998874 4 5899999998654 2 3367999999
Q ss_pred eccccccCCChHHHHHHHHHhccCCcEEEEEEec
Q 019957 243 AGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 243 ~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
+.... .+...+++++.++|||||++++.+..
T Consensus 135 ~d~~~---~~~~~~l~~~~~~LkpGG~lv~dn~~ 165 (221)
T 3dr5_A 135 GQVSP---MDLKALVDAAWPLLRRGGALVLADAL 165 (221)
T ss_dssp ECCCT---TTHHHHHHHHHHHEEEEEEEEETTTT
T ss_pred EcCcH---HHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 87543 34567899999999999999995543
No 185
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.55 E-value=3e-14 Score=121.55 Aligned_cols=110 Identities=15% Similarity=0.170 Sum_probs=90.0
Q ss_pred HhhcccCCCeEEEEcCCcCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC-CCCCCC
Q 019957 160 EYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-PFASGF 237 (333)
Q Consensus 160 ~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-p~~~~~ 237 (333)
..+...++.+|||||||+|..+..+++..+ ..+++++|+++.+++.+++++...++ ..++.++.+|+.+. +..++
T Consensus 50 ~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~- 126 (210)
T 3c3p_A 50 LLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGL--IDRVELQVGDPLGIAAGQRD- 126 (210)
T ss_dssp HHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSG--GGGEEEEESCHHHHHTTCCS-
T ss_pred HHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC--CceEEEEEecHHHHhccCCC-
Confidence 333344577999999999999999998855 67999999999999999999887764 45799999998653 44456
Q ss_pred cceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 238 VDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 238 fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
||+|++... ..+...+++++.++|||||++++.+.
T Consensus 127 fD~v~~~~~---~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 127 IDILFMDCD---VFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp EEEEEEETT---TSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred CCEEEEcCC---hhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 999998743 45678899999999999999998654
No 186
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.54 E-value=3.9e-14 Score=125.58 Aligned_cols=108 Identities=12% Similarity=0.200 Sum_probs=84.5
Q ss_pred CCCeEEEEcCCcCH----HHHHHHHhCC----CCeEEEEeCCHHHHHHHHHHHHh-----------------------cC
Q 019957 166 QGGLLVDVSCGSGL----FSRKFAKSGT----YSGVVALDFSENMLRQCYDFIKQ-----------------------DN 214 (333)
Q Consensus 166 ~~~~vLDiGcG~G~----~~~~l~~~~~----~~~v~g~D~s~~~~~~a~~~~~~-----------------------~~ 214 (333)
++.+|||+|||+|. ++..+++..+ ..+|+|+|+|+.+++.|++..-. .+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35689999999998 5555665522 24899999999999999986410 00
Q ss_pred cC-----CCCCeEEEEccCCCCCCC-CCCcceEEeccccccCCCh--HHHHHHHHHhccCCcEEEEE
Q 019957 215 TI-----LTSNLALVRADVCRLPFA-SGFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGT 273 (333)
Q Consensus 215 ~~-----~~~~i~~~~~d~~~lp~~-~~~fD~V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~ 273 (333)
.. ...++.|.++|+.+.|++ .++||+|+|.+++.|+.++ .+++++++++|+|||.|++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 00 013689999999886664 5789999999999999776 68999999999999999883
No 187
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.53 E-value=1.3e-13 Score=118.90 Aligned_cols=114 Identities=24% Similarity=0.338 Sum_probs=91.9
Q ss_pred HHHHhhc--ccCCCeEEEEcCCcCHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCc--CCCCCeEEEEccCCCC
Q 019957 157 MAQEYFK--SAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNT--ILTSNLALVRADVCRL 231 (333)
Q Consensus 157 ~~~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~--~~~~~i~~~~~d~~~l 231 (333)
.+.+.+. ..++.+|||||||+|.++..+++. ++..+|+++|+++.+++.+++++...+. ....++.++.+|+...
T Consensus 66 ~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 145 (226)
T 1i1n_A 66 YALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG 145 (226)
T ss_dssp HHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC
T ss_pred HHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC
Confidence 4444443 456789999999999999999887 4456999999999999999998876431 0024799999999876
Q ss_pred CCCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEec
Q 019957 232 PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
+..+++||+|++..+++++. +++.++|||||++++.+..
T Consensus 146 ~~~~~~fD~i~~~~~~~~~~------~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 146 YAEEAPYDAIHVGAAAPVVP------QALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp CGGGCCEEEEEECSBBSSCC------HHHHHTEEEEEEEEEEESC
T ss_pred cccCCCcCEEEECCchHHHH------HHHHHhcCCCcEEEEEEec
Confidence 65577899999999988764 6789999999999998754
No 188
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.53 E-value=4.3e-14 Score=129.02 Aligned_cols=119 Identities=10% Similarity=0.044 Sum_probs=92.5
Q ss_pred HHHHHHhhc-ccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCC-CeEEEEccCCCCC
Q 019957 155 FKMAQEYFK-SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTS-NLALVRADVCRLP 232 (333)
Q Consensus 155 ~~~~~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~-~i~~~~~d~~~lp 232 (333)
.+.+.+.+. ..++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.+++++..+++ .. ++.++++|+.++.
T Consensus 141 ~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~ga--~V~~VD~s~~al~~a~~n~~~~gl--~~~~v~~i~~D~~~~l 216 (332)
T 2igt_A 141 WEWLKNAVETADRPLKVLNLFGYTGVASLVAAAAGA--EVTHVDASKKAIGWAKENQVLAGL--EQAPIRWICEDAMKFI 216 (332)
T ss_dssp HHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHHHHTC--TTSCEEEECSCHHHHH
T ss_pred HHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcCC--CccceEEEECcHHHHH
Confidence 344555554 23567999999999999999999875 999999999999999999988774 22 4999999987643
Q ss_pred C----CCCCcceEEecc----------ccccCCChHHHHHHHHHhccCCcEEEEEEecc
Q 019957 233 F----ASGFVDAVHAGA----------ALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 233 ~----~~~~fD~V~~~~----------vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
. .+++||+|++.- ++++..+...+++++.++|||||.+++.....
T Consensus 217 ~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 217 QREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYS 275 (332)
T ss_dssp HHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECC
T ss_pred HHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCC
Confidence 1 156899999832 22334456788999999999999988877543
No 189
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.53 E-value=2.4e-13 Score=126.17 Aligned_cols=141 Identities=16% Similarity=0.125 Sum_probs=110.8
Q ss_pred CCcHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccC
Q 019957 149 PGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV 228 (333)
Q Consensus 149 ~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~ 228 (333)
+........+.... ..++.+|||+|||+|.++..++..++..+++|+|+|+.+++.|++++...|+ ..++.++++|+
T Consensus 201 ~l~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl--~~~i~~~~~D~ 277 (373)
T 3tm4_A 201 HLKASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGV--LDKIKFIQGDA 277 (373)
T ss_dssp CCCHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTC--GGGCEEEECCG
T ss_pred CccHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCC--CCceEEEECCh
Confidence 34555666666666 6678899999999999999999987666899999999999999999998874 46899999999
Q ss_pred CCCCCCCCCcceEEeccccccC-------CCh-HHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCC
Q 019957 229 CRLPFASGFVDAVHAGAALHCW-------PSP-SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYL 300 (333)
Q Consensus 229 ~~lp~~~~~fD~V~~~~vl~h~-------~d~-~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (333)
.++++.+++||+|+++-.+... .+. ..+++++.++| ||.+++.+.
T Consensus 278 ~~~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~------------------------- 330 (373)
T 3tm4_A 278 TQLSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT------------------------- 330 (373)
T ss_dssp GGGGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES-------------------------
T ss_pred hhCCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC-------------------------
Confidence 9998877899999996553321 111 56788888988 555555542
Q ss_pred CHHHHHHHHHhCCCcEEEE
Q 019957 301 TEEEIEDLCTSCGLTNYTS 319 (333)
Q Consensus 301 t~~~l~~ll~~aGf~~v~~ 319 (333)
+.+.+.+.+++.||+..+.
T Consensus 331 ~~~~~~~~~~~~G~~~~~~ 349 (373)
T 3tm4_A 331 EKKAIEEAIAENGFEIIHH 349 (373)
T ss_dssp CHHHHHHHHHHTTEEEEEE
T ss_pred CHHHHHHHHHHcCCEEEEE
Confidence 3467788999999998764
No 190
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.53 E-value=1.3e-14 Score=142.03 Aligned_cols=108 Identities=16% Similarity=0.226 Sum_probs=92.7
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC--CCCCCCcceEEe
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL--PFASGFVDAVHA 243 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l--p~~~~~fD~V~~ 243 (333)
++.+|||||||+|.++..|++.|. +|+|+|+++.+++.|+.+..+.| ..+++|.+++++++ ++.+++||+|++
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga--~V~giD~~~~~i~~a~~~a~~~~---~~~~~~~~~~~~~~~~~~~~~~fD~v~~ 140 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGA--TIVGIDFQQENINVCRALAEENP---DFAAEFRVGRIEEVIAALEEGEFDLAIG 140 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTST---TSEEEEEECCHHHHHHHCCTTSCSEEEE
T ss_pred CCCeEEEECCCCcHHHHHHHhCCC--EEEEECCCHHHHHHHHHHHHhcC---CCceEEEECCHHHHhhhccCCCccEEEE
Confidence 467999999999999999999976 99999999999999999988765 45799999999887 456789999999
Q ss_pred ccccccCCChHH--HHHHHHHhccCCcEEEEEEeccc
Q 019957 244 GAALHCWPSPSN--AVAEISRILRSGGVFVGTTFLRY 278 (333)
Q Consensus 244 ~~vl~h~~d~~~--~l~~~~r~LkpgG~l~i~~~~~~ 278 (333)
..+|||++|+.. .+..+.+.|+++|..++......
T Consensus 141 ~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~ 177 (569)
T 4azs_A 141 LSVFHHIVHLHGIDEVKRLLSRLADVTQAVILELAVK 177 (569)
T ss_dssp ESCHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCCT
T ss_pred CcchhcCCCHHHHHHHHHHHHHhccccceeeEEeccc
Confidence 999999998863 35567778889888887776553
No 191
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.52 E-value=2.8e-14 Score=122.90 Aligned_cols=121 Identities=14% Similarity=0.144 Sum_probs=95.4
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC
Q 019957 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (333)
Q Consensus 152 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (333)
....+.+...+...++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.+++++...++ ..++.++.+|+.+
T Consensus 50 ~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~ 127 (225)
T 3tr6_A 50 PEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGL--SDKIGLRLSPAKD 127 (225)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCHHH
T ss_pred HHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCC--CCceEEEeCCHHH
Confidence 33444555555555678999999999999999999854 67999999999999999999988774 4579999999854
Q ss_pred C-C-CCC----CCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecc
Q 019957 231 L-P-FAS----GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 231 l-p-~~~----~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
. + +.. ++||+|++... ..+...+++++.++|||||++++.+...
T Consensus 128 ~~~~~~~~~~~~~fD~v~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 128 TLAELIHAGQAWQYDLIYIDAD---KANTDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp HHHHHHTTTCTTCEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred HHHHhhhccCCCCccEEEECCC---HHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 3 2 111 78999997654 2346788999999999999999976543
No 192
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.52 E-value=1.1e-13 Score=119.46 Aligned_cols=115 Identities=19% Similarity=0.272 Sum_probs=92.8
Q ss_pred HHHHHhh--cccCCCeEEEEcCCcCHHHHHHHHhC-----CCCeEEEEeCCHHHHHHHHHHHHhcCcC--CCCCeEEEEc
Q 019957 156 KMAQEYF--KSAQGGLLVDVSCGSGLFSRKFAKSG-----TYSGVVALDFSENMLRQCYDFIKQDNTI--LTSNLALVRA 226 (333)
Q Consensus 156 ~~~~~~l--~~~~~~~vLDiGcG~G~~~~~l~~~~-----~~~~v~g~D~s~~~~~~a~~~~~~~~~~--~~~~i~~~~~ 226 (333)
..+.+.+ ...++.+|||||||+|.++..+++.. +..+|+++|+++.+++.+++++...++. ...++.++.+
T Consensus 68 ~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 147 (227)
T 2pbf_A 68 ALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHK 147 (227)
T ss_dssp HHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEEC
T ss_pred HHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEEC
Confidence 3444444 34567899999999999999999875 4569999999999999999998775410 0247999999
Q ss_pred cCCCCC----CCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEec
Q 019957 227 DVCRLP----FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 227 d~~~lp----~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
|+.... ...++||+|++..+++|+ ++++.++|||||++++..+.
T Consensus 148 d~~~~~~~~~~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 148 NIYQVNEEEKKELGLFDAIHVGASASEL------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CGGGCCHHHHHHHCCEEEEEECSBBSSC------CHHHHHHEEEEEEEEEEEEE
T ss_pred ChHhcccccCccCCCcCEEEECCchHHH------HHHHHHhcCCCcEEEEEEcc
Confidence 998765 556789999999999886 47889999999999998764
No 193
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.52 E-value=2.2e-14 Score=125.74 Aligned_cols=118 Identities=19% Similarity=0.117 Sum_probs=88.1
Q ss_pred HHHHHhhcccCCCeEEEEcCCcCHHHHHHHHh--CCCCeEEEEeCCHHHHHHHHHHHHhc---CcCCCCC----------
Q 019957 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS--GTYSGVVALDFSENMLRQCYDFIKQD---NTILTSN---------- 220 (333)
Q Consensus 156 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~~v~g~D~s~~~~~~a~~~~~~~---~~~~~~~---------- 220 (333)
+.+.+.+...++.+|||+|||+|.++..+++. .+..+++|+|+|+.+++.|++++... ++ ..+
T Consensus 41 ~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~--~~~~~~~~~~~~~ 118 (250)
T 1o9g_A 41 QRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGL--TARELERREQSER 118 (250)
T ss_dssp HHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHH--HHHHHHHHHHHHH
T ss_pred HHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccc--cccchhhhhhhhh
Confidence 33333333335679999999999999999887 44558999999999999999877654 21 111
Q ss_pred ---------------eE-------------EEEccCCCCCC-----CCCCcceEEeccccccCCC---------hHHHHH
Q 019957 221 ---------------LA-------------LVRADVCRLPF-----ASGFVDAVHAGAALHCWPS---------PSNAVA 258 (333)
Q Consensus 221 ---------------i~-------------~~~~d~~~lp~-----~~~~fD~V~~~~vl~h~~d---------~~~~l~ 258 (333)
+. ++++|+.+... ..++||+|+++..+.+..+ ...+++
T Consensus 119 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~ 198 (250)
T 1o9g_A 119 FGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLR 198 (250)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHH
T ss_pred cccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHH
Confidence 55 99999877421 3458999999876665543 348899
Q ss_pred HHHHhccCCcEEEEEEe
Q 019957 259 EISRILRSGGVFVGTTF 275 (333)
Q Consensus 259 ~~~r~LkpgG~l~i~~~ 275 (333)
++.++|||||++++...
T Consensus 199 ~~~~~LkpgG~l~~~~~ 215 (250)
T 1o9g_A 199 SLASALPAHAVIAVTDR 215 (250)
T ss_dssp HHHHHSCTTCEEEEEES
T ss_pred HHHHhcCCCcEEEEeCc
Confidence 99999999999999443
No 194
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.52 E-value=7.8e-15 Score=128.17 Aligned_cols=121 Identities=9% Similarity=0.081 Sum_probs=96.9
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC
Q 019957 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (333)
Q Consensus 152 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (333)
....+.+..++...++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|+++++..++ ..++.++.+|+.+
T Consensus 46 ~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~--~~~i~~~~gda~~ 123 (242)
T 3r3h_A 46 PEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQ--EHKIKLRLGPALD 123 (242)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTC--TTTEEEEESCHHH
T ss_pred HHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHHH
Confidence 34445555555555678999999999999999998754 67999999999999999999988875 5689999999865
Q ss_pred C-CCC-----CCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecc
Q 019957 231 L-PFA-----SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 231 l-p~~-----~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
. +.. +++||+|++... ..+...+++++.++|||||++++.+...
T Consensus 124 ~l~~~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~~ 173 (242)
T 3r3h_A 124 TLHSLLNEGGEHQFDFIFIDAD---KTNYLNYYELALKLVTPKGLIAIDNIFW 173 (242)
T ss_dssp HHHHHHHHHCSSCEEEEEEESC---GGGHHHHHHHHHHHEEEEEEEEEECSSS
T ss_pred HHHHHhhccCCCCEeEEEEcCC---hHHhHHHHHHHHHhcCCCeEEEEECCcc
Confidence 4 221 478999998765 2345678999999999999999976554
No 195
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.51 E-value=6.4e-14 Score=122.71 Aligned_cols=119 Identities=13% Similarity=0.117 Sum_probs=94.9
Q ss_pred HHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC
Q 019957 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (333)
Q Consensus 153 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (333)
.....+...+...++.+|||||||+|..+..+++..+ +.+++++|+++.+++.|+++++..++ ..++.++.+|+.+.
T Consensus 66 ~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~--~~~i~~~~gda~~~ 143 (247)
T 1sui_A 66 DEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGV--DHKIDFREGPALPV 143 (247)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTC--GGGEEEEESCHHHH
T ss_pred HHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCCeEEEECCHHHH
Confidence 3334444444555677999999999999999999855 57999999999999999999988774 46899999998653
Q ss_pred -C-C-----CCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEec
Q 019957 232 -P-F-----ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 232 -p-~-----~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
+ + .+++||+|++... ..+...+++++.++|||||++++....
T Consensus 144 l~~l~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~ 192 (247)
T 1sui_A 144 LDEMIKDEKNHGSYDFIFVDAD---KDNYLNYHKRLIDLVKVGGVIGYDNTL 192 (247)
T ss_dssp HHHHHHSGGGTTCBSEEEECSC---STTHHHHHHHHHHHBCTTCCEEEECTT
T ss_pred HHHHHhccCCCCCEEEEEEcCc---hHHHHHHHHHHHHhCCCCeEEEEecCC
Confidence 3 1 1578999998754 345678899999999999999886543
No 196
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.51 E-value=4.6e-14 Score=125.56 Aligned_cols=119 Identities=14% Similarity=0.161 Sum_probs=95.1
Q ss_pred HHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCC--
Q 019957 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTY-SGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF-- 233 (333)
Q Consensus 157 ~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~-- 233 (333)
.+...+...++.+|||+|||+|..+..+++..++ .+|+++|+++.+++.++++++..+ ..++.++.+|+..++.
T Consensus 74 l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g---~~~v~~~~~D~~~~~~~~ 150 (274)
T 3ajd_A 74 IPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMG---VLNTIIINADMRKYKDYL 150 (274)
T ss_dssp HHHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTT---CCSEEEEESCHHHHHHHH
T ss_pred HHHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhC---CCcEEEEeCChHhcchhh
Confidence 3445566677889999999999999999986543 699999999999999999998877 4589999999987653
Q ss_pred --CCCCcceEEec------cccc------------cCCChHHHHHHHHHhccCCcEEEEEEeccc
Q 019957 234 --ASGFVDAVHAG------AALH------------CWPSPSNAVAEISRILRSGGVFVGTTFLRY 278 (333)
Q Consensus 234 --~~~~fD~V~~~------~vl~------------h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~ 278 (333)
..++||+|++. +++. .......+|+++.++|||||++++.+....
T Consensus 151 ~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~ 215 (274)
T 3ajd_A 151 LKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSME 215 (274)
T ss_dssp HHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred hhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCC
Confidence 25789999986 2222 224557899999999999999999886553
No 197
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.51 E-value=2.4e-13 Score=129.23 Aligned_cols=123 Identities=18% Similarity=0.251 Sum_probs=100.9
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC
Q 019957 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTY-SGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (333)
Q Consensus 152 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (333)
+.....+...+...++.+|||+|||+|..+..++...++ .+++++|+++.+++.++++++..| ..++.++.+|+..
T Consensus 245 d~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g---~~~v~~~~~D~~~ 321 (450)
T 2yxl_A 245 EEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMG---IKIVKPLVKDARK 321 (450)
T ss_dssp CHHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTT---CCSEEEECSCTTC
T ss_pred CchhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcC---CCcEEEEEcChhh
Confidence 333455566677778889999999999999999987544 699999999999999999998877 4579999999988
Q ss_pred CC--CCCCCcceEEe------ccccccCCCh----------------HHHHHHHHHhccCCcEEEEEEecc
Q 019957 231 LP--FASGFVDAVHA------GAALHCWPSP----------------SNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 231 lp--~~~~~fD~V~~------~~vl~h~~d~----------------~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
++ +.+++||+|++ .+++++.++. ..+|+++.++|||||.+++.+...
T Consensus 322 ~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 322 APEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp CSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred cchhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 76 55578999996 4556665554 568999999999999999988654
No 198
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.50 E-value=1.4e-13 Score=127.05 Aligned_cols=105 Identities=21% Similarity=0.341 Sum_probs=90.0
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEe
Q 019957 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (333)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 243 (333)
..++++|||||||+|.++..+++.| ..+|+++|.|+ +++.|++.++.+++ ..++.++.++++++.++ ++||+|++
T Consensus 81 ~~~~k~VLDvG~GtGiLs~~Aa~aG-A~~V~ave~s~-~~~~a~~~~~~n~~--~~~i~~i~~~~~~~~lp-e~~Dvivs 155 (376)
T 4hc4_A 81 ALRGKTVLDVGAGTGILSIFCAQAG-ARRVYAVEASA-IWQQAREVVRFNGL--EDRVHVLPGPVETVELP-EQVDAIVS 155 (376)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEECST-THHHHHHHHHHTTC--TTTEEEEESCTTTCCCS-SCEEEEEC
T ss_pred hcCCCEEEEeCCCccHHHHHHHHhC-CCEEEEEeChH-HHHHHHHHHHHcCC--CceEEEEeeeeeeecCC-ccccEEEe
Confidence 3468899999999999999888887 45899999996 88999999999886 67899999999998765 68999998
Q ss_pred ---ccccccCCChHHHHHHHHHhccCCcEEEEE
Q 019957 244 ---GAALHCWPSPSNAVAEISRILRSGGVFVGT 273 (333)
Q Consensus 244 ---~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~ 273 (333)
...|.+-.....++....++|||||.++-.
T Consensus 156 E~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 156 EWMGYGLLHESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp CCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred ecccccccccchhhhHHHHHHhhCCCCceECCc
Confidence 555666667788999999999999998753
No 199
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.50 E-value=1.6e-13 Score=121.87 Aligned_cols=106 Identities=20% Similarity=0.214 Sum_probs=91.8
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEe
Q 019957 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (333)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 243 (333)
..++.+|||+|||+|.++..+++.++..+|+|+|+++.+++.++++++.++ ..++.++.+|+.+.+. .++||+|++
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~---l~~~~~~~~d~~~~~~-~~~~D~Vi~ 192 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNK---LNNVIPILADNRDVEL-KDVADRVIM 192 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTT---CSSEEEEESCGGGCCC-TTCEEEEEE
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC---CCCEEEEECChHHcCc-cCCceEEEE
Confidence 346789999999999999999998666799999999999999999998877 4578999999988743 678999998
Q ss_pred ccccccCCChHHHHHHHHHhccCCcEEEEEEecc
Q 019957 244 GAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 244 ~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
.... +...++.++.+.|||||.+++.+...
T Consensus 193 d~p~----~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 193 GYVH----KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp CCCS----SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCcc----cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 7653 56778999999999999999988655
No 200
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.50 E-value=2.1e-13 Score=115.24 Aligned_cols=98 Identities=12% Similarity=0.303 Sum_probs=78.9
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCC--CCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC----------
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGT--YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP---------- 232 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~--~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp---------- 232 (333)
.++.+|||+|||+|.++..+++..+ ..+|+|+|+++.. . ..++.++++|+.+.+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~---~~~v~~~~~d~~~~~~~~~~~~~~i 86 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------P---IPNVYFIQGEIGKDNMNNIKNINYI 86 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------C---CTTCEEEECCTTTTSSCCC------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------C---CCCceEEEccccchhhhhhcccccc
Confidence 4567999999999999999998865 5799999999831 1 457899999998876
Q ss_pred ---------------CCCCCcceEEeccccccCC----ChH-------HHHHHHHHhccCCcEEEEEEec
Q 019957 233 ---------------FASGFVDAVHAGAALHCWP----SPS-------NAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 233 ---------------~~~~~fD~V~~~~vl~h~~----d~~-------~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
+++++||+|++..++++.. +.. .+++++.++|||||.+++..+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 87 DNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp -----CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 5567999999988777642 222 3788999999999999987653
No 201
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.50 E-value=1.2e-13 Score=132.02 Aligned_cols=114 Identities=18% Similarity=0.271 Sum_probs=94.2
Q ss_pred HHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCC
Q 019957 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (333)
Q Consensus 156 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (333)
+.+.+.+...++.+|||||||+|.++..+++.+ ..+|+|+|+|+ +++.|++++..+++ ..++.++.+|+.+++++
T Consensus 148 ~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~-~~~V~gvD~s~-~l~~A~~~~~~~gl--~~~v~~~~~d~~~~~~~- 222 (480)
T 3b3j_A 148 RAILQNHTDFKDKIVLDVGCGSGILSFFAAQAG-ARKIYAVEAST-MAQHAEVLVKSNNL--TDRIVVIPGKVEEVSLP- 222 (480)
T ss_dssp HHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTT-CSEEEEEECHH-HHHHHHHHHHHTTC--TTTEEEEESCTTTCCCS-
T ss_pred HHHHHhhhhcCCCEEEEecCcccHHHHHHHHcC-CCEEEEEEcHH-HHHHHHHHHHHcCC--CCcEEEEECchhhCccC-
Confidence 344455555567899999999999999998864 56999999998 99999999888774 57899999999987654
Q ss_pred CCcceEEeccccccCCCh--HHHHHHHHHhccCCcEEEEEE
Q 019957 236 GFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~ 274 (333)
++||+|++..+++|+.+. ...+.++.++|||||.+++..
T Consensus 223 ~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 223 EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESCE
T ss_pred CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 589999998888887654 567788899999999998644
No 202
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.49 E-value=4.3e-13 Score=120.64 Aligned_cols=106 Identities=14% Similarity=0.182 Sum_probs=85.8
Q ss_pred CeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC--CCCCCCcceEEecc
Q 019957 168 GLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL--PFASGFVDAVHAGA 245 (333)
Q Consensus 168 ~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l--p~~~~~fD~V~~~~ 245 (333)
.+|||||||+|.++..+.+..+..+++++|+++.+++.|++++.... .++++++.+|+.++ .+.+++||+|++..
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~---~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~ 167 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR---APRVKIRVDDARMVAESFTPASRDVIIRDV 167 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC---TTTEEEEESCHHHHHHTCCTTCEEEEEECC
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC---CCceEEEECcHHHHHhhccCCCCCEEEECC
Confidence 49999999999999999998777799999999999999999876432 56899999998654 23467999999854
Q ss_pred ccccC-C---ChHHHHHHHHHhccCCcEEEEEEec
Q 019957 246 ALHCW-P---SPSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 246 vl~h~-~---d~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
..+.. + ....++++++++|||||++++....
T Consensus 168 ~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 168 FAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp STTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCccccchhhhHHHHHHHHHHhcCCCcEEEEEecC
Confidence 33221 1 1267899999999999999987753
No 203
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.49 E-value=1.1e-12 Score=121.75 Aligned_cols=105 Identities=13% Similarity=0.032 Sum_probs=87.6
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC-CCC-CCCCcceEE
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LPF-ASGFVDAVH 242 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-lp~-~~~~fD~V~ 242 (333)
.++.+|||+| |+|.++..++..++..+|+|+|+++.+++.|+++++..|+ .++.++.+|+.+ +|. .+++||+|+
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~---~~v~~~~~D~~~~l~~~~~~~fD~Vi 246 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGY---EDIEIFTFDLRKPLPDYALHKFDTFI 246 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTC---CCEEEECCCTTSCCCTTTSSCBSEEE
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCEEEEEChhhhhchhhccCCccEEE
Confidence 3578999999 9999999999887667999999999999999999988774 389999999988 764 356899999
Q ss_pred eccccccCCChHHHHHHHHHhccCCcEE-EEEE
Q 019957 243 AGAALHCWPSPSNAVAEISRILRSGGVF-VGTT 274 (333)
Q Consensus 243 ~~~vl~h~~d~~~~l~~~~r~LkpgG~l-~i~~ 274 (333)
++..+++.. ...+++++.++|||||++ ++..
T Consensus 247 ~~~p~~~~~-~~~~l~~~~~~LkpgG~~~~~~~ 278 (373)
T 2qm3_A 247 TDPPETLEA-IRAFVGRGIATLKGPRCAGYFGI 278 (373)
T ss_dssp ECCCSSHHH-HHHHHHHHHHTBCSTTCEEEEEE
T ss_pred ECCCCchHH-HHHHHHHHHHHcccCCeEEEEEE
Confidence 986654332 478899999999999954 5544
No 204
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.49 E-value=2.7e-13 Score=121.15 Aligned_cols=117 Identities=17% Similarity=0.177 Sum_probs=92.2
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC
Q 019957 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (333)
Q Consensus 152 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (333)
+..++.+.+.+...++.+|||+|||+|.++..++.. +..+|+|+|+|+.+++.|+++....++ ..++.++++|+.+.
T Consensus 109 e~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l--~~~v~~~~~D~~~~ 185 (284)
T 1nv8_A 109 EELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGV--SDRFFVRKGEFLEP 185 (284)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTC--TTSEEEEESSTTGG
T ss_pred HHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCC--CCceEEEECcchhh
Confidence 344555556555445679999999999999999998 677999999999999999999988774 34699999999773
Q ss_pred CCCCCCc---ceEEec------------cccccCC--------ChHHHHHHHH-HhccCCcEEEEEE
Q 019957 232 PFASGFV---DAVHAG------------AALHCWP--------SPSNAVAEIS-RILRSGGVFVGTT 274 (333)
Q Consensus 232 p~~~~~f---D~V~~~------------~vl~h~~--------d~~~~l~~~~-r~LkpgG~l~i~~ 274 (333)
+. ++| |+|+++ .+. |.+ |...+++++. +.|+|||.+++..
T Consensus 186 -~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 186 -FK-EKFASIEMILSNPPYVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp -GG-GGTTTCCEEEECCCCBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEEC
T ss_pred -cc-cccCCCCEEEEcCCCCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEE
Confidence 22 479 999996 222 322 2237899999 9999999999854
No 205
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.48 E-value=6.4e-13 Score=119.15 Aligned_cols=111 Identities=16% Similarity=0.273 Sum_probs=84.3
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcC--cCCCCCeEEEEccCCCC-CCCCCCcceEE
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDN--TILTSNLALVRADVCRL-PFASGFVDAVH 242 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~--~~~~~~i~~~~~d~~~l-p~~~~~fD~V~ 242 (333)
++.+|||||||+|.++..+++..+..+|+++|+++.+++.|++++...+ ....++++++.+|+.+. +..+++||+|+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 4679999999999999999987656789999999999999999876531 00145899999998664 34467899999
Q ss_pred eccccccCCCh----HHHHHHHHHhccCCcEEEEEEec
Q 019957 243 AGAALHCWPSP----SNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 243 ~~~vl~h~~d~----~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
+.......+.. ..+++++.++|||||++++....
T Consensus 163 ~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s 200 (294)
T 3adn_A 163 SDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp ECC----------CCHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred ECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCC
Confidence 95543222221 67899999999999999997643
No 206
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.48 E-value=1.7e-13 Score=118.79 Aligned_cols=118 Identities=13% Similarity=0.090 Sum_probs=93.2
Q ss_pred HHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC--
Q 019957 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-- 230 (333)
Q Consensus 154 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-- 230 (333)
..+.+...+...++.+|||||||+|..+..+++..+ ..+++++|+++.+++.|++++...++ ..++.++.+|+.+
T Consensus 60 ~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~--~~~i~~~~~d~~~~l 137 (232)
T 3cbg_A 60 QAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGV--AEKISLRLGPALATL 137 (232)
T ss_dssp HHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC--GGGEEEEESCHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHHHHH
Confidence 334444444445677999999999999999998754 56999999999999999999887764 4579999999744
Q ss_pred --CCCCC--CCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEec
Q 019957 231 --LPFAS--GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 231 --lp~~~--~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
++..+ ++||+|++.... .+...+++++.++|+|||++++.+..
T Consensus 138 ~~l~~~~~~~~fD~V~~d~~~---~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 138 EQLTQGKPLPEFDLIFIDADK---RNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp HHHHTSSSCCCEEEEEECSCG---GGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred HHHHhcCCCCCcCEEEECCCH---HHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 23323 789999987652 34578899999999999999997644
No 207
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.48 E-value=1.3e-13 Score=120.02 Aligned_cols=121 Identities=18% Similarity=0.214 Sum_probs=95.8
Q ss_pred cHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCC
Q 019957 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVC 229 (333)
Q Consensus 151 ~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~ 229 (333)
.....+.+...+...++.+|||||||+|.++..+++..+ ..+++++|+++.+++.+++++...++ ..++.++.+|+.
T Consensus 45 ~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~--~~~v~~~~~d~~ 122 (239)
T 2hnk_A 45 SPEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGL--ENKIFLKLGSAL 122 (239)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC--GGGEEEEESCHH
T ss_pred CHHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCCEEEEECCHH
Confidence 334445666666666788999999999999999999864 56999999999999999999888764 345999999985
Q ss_pred CC-C--------------CCC--CCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEec
Q 019957 230 RL-P--------------FAS--GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 230 ~l-p--------------~~~--~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
+. + |++ ++||+|++....+ +...+++++.++|||||++++.+..
T Consensus 123 ~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~---~~~~~l~~~~~~L~pgG~lv~~~~~ 183 (239)
T 2hnk_A 123 ETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKE---NYPNYYPLILKLLKPGGLLIADNVL 183 (239)
T ss_dssp HHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGG---GHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred HHHHHHHhhcccccccccccCCCCCcCEEEEeCCHH---HHHHHHHHHHHHcCCCeEEEEEccc
Confidence 42 2 222 7899999886544 3467899999999999999997643
No 208
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.47 E-value=2.6e-12 Score=108.96 Aligned_cols=137 Identities=13% Similarity=0.108 Sum_probs=100.4
Q ss_pred CcHHHHHHHHHhh---cccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEc
Q 019957 150 GPDEEFKMAQEYF---KSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRA 226 (333)
Q Consensus 150 ~~~~~~~~~~~~l---~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~ 226 (333)
........+...+ ...++.+|||+|||+|.++..+++.+ ..+++|+|+++.+++.+++++...+ . ++.++.+
T Consensus 30 ~~~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~---~-~~~~~~~ 104 (207)
T 1wy7_A 30 TPGNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLLG-AKEVICVEVDKEAVDVLIENLGEFK---G-KFKVFIG 104 (207)
T ss_dssp CCHHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHTGGGT---T-SEEEEES
T ss_pred CchHHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHcC---C-CEEEEEC
Confidence 3344444444333 24467899999999999999999885 3479999999999999999987765 2 7999999
Q ss_pred cCCCCCCCCCCcceEEeccccccCC--ChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHH
Q 019957 227 DVCRLPFASGFVDAVHAGAALHCWP--SPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEE 304 (333)
Q Consensus 227 d~~~lp~~~~~fD~V~~~~vl~h~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 304 (333)
|+.+++ ++||+|+++..+++.. ....+++++.+++ |+.+++..... -+.+.
T Consensus 105 d~~~~~---~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~~~~~~----------------------~~~~~ 157 (207)
T 1wy7_A 105 DVSEFN---SRVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DVVYSIHLAKP----------------------EVRRF 157 (207)
T ss_dssp CGGGCC---CCCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SEEEEEEECCH----------------------HHHHH
T ss_pred chHHcC---CCCCEEEEcCCCccccCCchHHHHHHHHHhc--CcEEEEEeCCc----------------------CCHHH
Confidence 998875 4899999988877664 3357889999988 55444432111 02345
Q ss_pred HHHHHHhCCCcEEE
Q 019957 305 IEDLCTSCGLTNYT 318 (333)
Q Consensus 305 l~~ll~~aGf~~v~ 318 (333)
+.+.+++.||++..
T Consensus 158 ~~~~l~~~g~~~~~ 171 (207)
T 1wy7_A 158 IEKFSWEHGFVVTH 171 (207)
T ss_dssp HHHHHHHTTEEEEE
T ss_pred HHHHHHHCCCeEEE
Confidence 67788899987654
No 209
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.47 E-value=2.2e-13 Score=117.53 Aligned_cols=114 Identities=24% Similarity=0.358 Sum_probs=89.5
Q ss_pred HHHHHhh--cccCCCeEEEEcCCcCHHHHHHHHhCC------CCeEEEEeCCHHHHHHHHHHHHhcCcC--CCCCeEEEE
Q 019957 156 KMAQEYF--KSAQGGLLVDVSCGSGLFSRKFAKSGT------YSGVVALDFSENMLRQCYDFIKQDNTI--LTSNLALVR 225 (333)
Q Consensus 156 ~~~~~~l--~~~~~~~vLDiGcG~G~~~~~l~~~~~------~~~v~g~D~s~~~~~~a~~~~~~~~~~--~~~~i~~~~ 225 (333)
..+.+.+ ...++.+|||||||+|.++..+++... ..+|+++|+++.+++.+++++...+.. ...++.++.
T Consensus 72 ~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 151 (227)
T 1r18_A 72 AFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVE 151 (227)
T ss_dssp HHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred HHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEE
Confidence 4445555 345678999999999999999988532 248999999999999999987654200 024789999
Q ss_pred ccCCCCCCCC-CCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEec
Q 019957 226 ADVCRLPFAS-GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 226 ~d~~~lp~~~-~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
+|... ++++ ++||+|++..+++|+. +++.++|||||++++....
T Consensus 152 ~d~~~-~~~~~~~fD~I~~~~~~~~~~------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 152 GDGRK-GYPPNAPYNAIHVGAAAPDTP------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp SCGGG-CCGGGCSEEEEEECSCBSSCC------HHHHHTEEEEEEEEEEESC
T ss_pred CCccc-CCCcCCCccEEEECCchHHHH------HHHHHHhcCCCEEEEEEec
Confidence 99977 3333 7899999999999875 6889999999999998754
No 210
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.47 E-value=5.8e-14 Score=125.57 Aligned_cols=115 Identities=17% Similarity=0.212 Sum_probs=89.4
Q ss_pred cHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC
Q 019957 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (333)
Q Consensus 151 ~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (333)
.....+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+++.+++.++++....+. ..++.++.+|+.+
T Consensus 13 d~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~D~~~ 88 (285)
T 1zq9_A 13 NPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAK--KVVACELDPRLVAELHKRVQGTPV--ASKLQVLVGDVLK 88 (285)
T ss_dssp CHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHSS--EEEEEESCHHHHHHHHHHHTTSTT--GGGEEEEESCTTT
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhCC--EEEEEECCHHHHHHHHHHHHhcCC--CCceEEEEcceec
Confidence 344567777777777788999999999999999999875 999999999999999998866542 3579999999988
Q ss_pred CCCCCCCcceEEec-----------cccccCCChHHHH----HHH--HHhccCCcEEE
Q 019957 231 LPFASGFVDAVHAG-----------AALHCWPSPSNAV----AEI--SRILRSGGVFV 271 (333)
Q Consensus 231 lp~~~~~fD~V~~~-----------~vl~h~~d~~~~l----~~~--~r~LkpgG~l~ 271 (333)
++++ +||+|+++ .+++|.++....+ +|+ +++|+|||.++
T Consensus 89 ~~~~--~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 89 TDLP--FFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp SCCC--CCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred ccch--hhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 7764 79999996 4555555443211 333 46899999654
No 211
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.46 E-value=7e-13 Score=117.89 Aligned_cols=147 Identities=12% Similarity=0.108 Sum_probs=104.5
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc--CcCCCCCeEEEEccCCC-CCCCCCCcceEE
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTILTSNLALVRADVCR-LPFASGFVDAVH 242 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~--~~~~~~~i~~~~~d~~~-lp~~~~~fD~V~ 242 (333)
.+.+|||||||+|.++..+.+..+..+++++|+++.+++.|++++... ++ ..++++++.+|+.. ++..+++||+|+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~-~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKL-DDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTT-TSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhcccc-CCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 467999999999999999998754679999999999999999987531 11 14689999999865 333357899999
Q ss_pred eccccccCCC----hHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCCcEEE
Q 019957 243 AGAALHCWPS----PSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYT 318 (333)
Q Consensus 243 ~~~vl~h~~d----~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf~~v~ 318 (333)
+....++.+. ...+++++.++|||||++++...+.. .... ...++.+.+++. |..+.
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~------~~~~------------~~~~~~~~l~~~-F~~v~ 214 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPW------FTPE------------LITNVQRDVKEI-FPITK 214 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTT------TCHH------------HHHHHHHHHHTT-CSEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcc------ccHH------------HHHHHHHHHHHh-CCCeE
Confidence 9654322221 25789999999999999999753321 0000 123555667776 77666
Q ss_pred EEE-------eCeEEEEEEeC
Q 019957 319 SKV-------QQSFIMFAAQK 332 (333)
Q Consensus 319 ~~~-------~~~~~~~~a~k 332 (333)
... .+.|.++.++|
T Consensus 215 ~~~~~vp~~~~g~w~~~~ask 235 (275)
T 1iy9_A 215 LYTANIPTYPSGLWTFTIGSK 235 (275)
T ss_dssp EEEECCTTSGGGCEEEEEEES
T ss_pred EEEEecCcccCcceEEEEeeC
Confidence 543 35666666665
No 212
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.45 E-value=2.6e-13 Score=117.13 Aligned_cols=119 Identities=15% Similarity=0.122 Sum_probs=94.2
Q ss_pred HHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC
Q 019957 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (333)
Q Consensus 153 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (333)
...+.+.......++.+|||||||+|.++..+++..+ ..+++++|+++.+++.+++++...++ ..++.++.+|+.+.
T Consensus 56 ~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~--~~~i~~~~~d~~~~ 133 (229)
T 2avd_A 56 EQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEA--EHKIDLRLKPALET 133 (229)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTC--TTTEEEEESCHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC--CCeEEEEEcCHHHH
Confidence 3344555555555678999999999999999998754 56999999999999999999988774 46899999998543
Q ss_pred -C-CCC----CCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEec
Q 019957 232 -P-FAS----GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 232 -p-~~~----~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
+ +.+ ++||+|++... ..+...+++++.++|+|||++++.+..
T Consensus 134 ~~~~~~~~~~~~~D~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 134 LDELLAAGEAGTFDVAVVDAD---KENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp HHHHHHTTCTTCEEEEEECSC---STTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred HHHHHhcCCCCCccEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 1 111 68999998654 345578899999999999999997644
No 213
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.45 E-value=1.6e-12 Score=117.83 Aligned_cols=110 Identities=17% Similarity=0.101 Sum_probs=86.8
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHh--cCcCCCCCeEEEEccCCC-CCCCCCCcceEE
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQ--DNTILTSNLALVRADVCR-LPFASGFVDAVH 242 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~--~~~~~~~~i~~~~~d~~~-lp~~~~~fD~V~ 242 (333)
.+.+|||||||+|.++..+++..+..+++++|+++.+++.|++++.. .+....+++.++.+|+.+ ++..+++||+|+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 45799999999999999999876567999999999999999998754 110014689999999876 333467899999
Q ss_pred ecccccc-CCC------hHHHHHHHHHhccCCcEEEEEEe
Q 019957 243 AGAALHC-WPS------PSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 243 ~~~vl~h-~~d------~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
+....++ ... ...+++++.++|||||++++...
T Consensus 157 ~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 196 (314)
T 1uir_A 157 IDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTG 196 (314)
T ss_dssp EECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEcc
Confidence 9765543 112 26889999999999999999754
No 214
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.45 E-value=6.2e-14 Score=128.93 Aligned_cols=109 Identities=17% Similarity=0.179 Sum_probs=85.2
Q ss_pred HHHHHHHhhcccCCCeEEEEcCC------cCHHHHHHHH-hCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEc
Q 019957 154 EFKMAQEYFKSAQGGLLVDVSCG------SGLFSRKFAK-SGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRA 226 (333)
Q Consensus 154 ~~~~~~~~l~~~~~~~vLDiGcG------~G~~~~~l~~-~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~ 226 (333)
..+.+...+.. ++.+||||||| +|..+..+.+ .++..+|+|+|+|+.+. .. .+++.++++
T Consensus 205 ~Ye~lL~~l~~-~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~-------~~-----~~rI~fv~G 271 (419)
T 3sso_A 205 HYDRHFRDYRN-QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH-------VD-----ELRIRTIQG 271 (419)
T ss_dssp HHHHHHGGGTT-SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG-------GC-----BTTEEEEEC
T ss_pred HHHHHHHhhcC-CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh-------hc-----CCCcEEEEe
Confidence 34444443432 46799999999 6555555554 45778999999999872 11 568999999
Q ss_pred cCCCCCCC------CCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEec
Q 019957 227 DVCRLPFA------SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 227 d~~~lp~~------~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
|+.++++. +++||+|++.. .+++.+...+|+++.++|||||++++.+..
T Consensus 272 Da~dlpf~~~l~~~d~sFDlVisdg-sH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 272 DQNDAEFLDRIARRYGPFDIVIDDG-SHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp CTTCHHHHHHHHHHHCCEEEEEECS-CCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred cccccchhhhhhcccCCccEEEECC-cccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 99998876 68999999875 467778889999999999999999998866
No 215
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.44 E-value=1.7e-12 Score=116.63 Aligned_cols=109 Identities=13% Similarity=0.077 Sum_probs=83.5
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHh--cCcCCCCCeEEEEccCCC-CCCCCCCcceEE
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQ--DNTILTSNLALVRADVCR-LPFASGFVDAVH 242 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~--~~~~~~~~i~~~~~d~~~-lp~~~~~fD~V~ 242 (333)
.+.+|||||||+|.++..+++..+..+++++|+++.+++.+++++.. .++ ..+++.++.+|+.. ++..+++||+|+
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~-~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGF-DDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGG-GCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcccc-CCCceEEEECcHHHHHhhCCCCceEEE
Confidence 45799999999999999999875567999999999999999998753 111 14689999999865 333457899999
Q ss_pred eccccccCC-----ChHHHHHHHHHhccCCcEEEEEEe
Q 019957 243 AGAALHCWP-----SPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 243 ~~~vl~h~~-----d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
+...-.++. ....+++++.++|||||++++...
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 206 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE 206 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEcc
Confidence 853321021 226889999999999999999753
No 216
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.44 E-value=3.5e-13 Score=117.27 Aligned_cols=117 Identities=15% Similarity=0.167 Sum_probs=93.0
Q ss_pred HHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC-
Q 019957 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL- 231 (333)
Q Consensus 154 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l- 231 (333)
..+.+...+...++.+|||||||+|..+..+++..+ ..+++++|+++.+++.|+++++..++ ..++.++.+|+.+.
T Consensus 58 ~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~--~~~i~~~~gda~~~l 135 (237)
T 3c3y_A 58 AGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGV--EHKINFIESDAMLAL 135 (237)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC--GGGEEEEESCHHHHH
T ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHHHHH
Confidence 334444444555677999999999999999998854 67999999999999999999988774 45799999998653
Q ss_pred C-C-----CCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 232 P-F-----ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 232 p-~-----~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
+ + .+++||+|++.... .+...+++++.++|||||++++.+.
T Consensus 136 ~~l~~~~~~~~~fD~I~~d~~~---~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 136 DNLLQGQESEGSYDFGFVDADK---PNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp HHHHHSTTCTTCEEEEEECSCG---GGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred HHHHhccCCCCCcCEEEECCch---HHHHHHHHHHHHhcCCCeEEEEecC
Confidence 2 2 15789999986532 2457889999999999999988654
No 217
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.44 E-value=6.5e-13 Score=114.77 Aligned_cols=159 Identities=12% Similarity=0.071 Sum_probs=113.6
Q ss_pred cHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC
Q 019957 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (333)
Q Consensus 151 ~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (333)
.+.+...+...+ .++.+|||||||+|-++..+....+..+|+++|+++.+++.+++++..+|+ +..+...|+..
T Consensus 119 lD~fY~~i~~~i--~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~----~~~~~v~D~~~ 192 (281)
T 3lcv_B 119 LDEFYRELFRHL--PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNV----PHRTNVADLLE 192 (281)
T ss_dssp HHHHHHHHGGGS--CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTC----CEEEEECCTTT
T ss_pred HHHHHHHHHhcc--CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCC----CceEEEeeecc
Confidence 334444444444 336799999999999999998887888999999999999999999988763 57888888866
Q ss_pred CCCCCCCcceEEeccccccCCChH--HHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHH
Q 019957 231 LPFASGFVDAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDL 308 (333)
Q Consensus 231 lp~~~~~fD~V~~~~vl~h~~d~~--~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~l 308 (333)
-+ ..+.||+|++.-+++|+.+.. ..+ ++...|+++|+++-...-.-..-.+.+...+ .+.|+..
T Consensus 193 ~~-p~~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y------------~~~~e~~ 258 (281)
T 3lcv_B 193 DR-LDEPADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQRSKGMFQNY------------SQSFESQ 258 (281)
T ss_dssp SC-CCSCCSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEECC-------CHHHHH------------HHHHHHH
T ss_pred cC-CCCCcchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEeccchhhcCCCcchhhHH------------HHHHHHH
Confidence 54 357899999999999997653 344 8999999999988766421111111111111 3578899
Q ss_pred HHhCCCcEEEEEEeCeEEEEEE
Q 019957 309 CTSCGLTNYTSKVQQSFIMFAA 330 (333)
Q Consensus 309 l~~aGf~~v~~~~~~~~~~~~a 330 (333)
+.+.|+.+-+ ...+.=++|+.
T Consensus 259 ~~~~g~~~~~-~~~~nEl~y~i 279 (281)
T 3lcv_B 259 ARERSCRIQR-LEIGNELIYVI 279 (281)
T ss_dssp HHHHTCCEEE-EEETTEEEEEE
T ss_pred HHhcCCceee-eeecCeeEEEe
Confidence 9999996665 44443344433
No 218
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.44 E-value=2.9e-12 Score=113.45 Aligned_cols=136 Identities=14% Similarity=0.137 Sum_probs=106.1
Q ss_pred HHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCC
Q 019957 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (333)
Q Consensus 156 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (333)
..+.+.+ .++.+|||+|||+|.++..+++.+ ..+|+++|+++.+++.++++++.+++ ..++.++.+|..+++. .
T Consensus 117 ~ri~~~~--~~g~~VlD~~aG~G~~~i~~a~~g-~~~V~avD~np~a~~~~~~N~~~N~v--~~~v~~~~~D~~~~~~-~ 190 (278)
T 3k6r_A 117 VRMAKVA--KPDELVVDMFAGIGHLSLPIAVYG-KAKVIAIEKDPYTFKFLVENIHLNKV--EDRMSAYNMDNRDFPG-E 190 (278)
T ss_dssp HHHHHHC--CTTCEEEETTCTTTTTTHHHHHHT-CCEEEEECCCHHHHHHHHHHHHHTTC--TTTEEEECSCTTTCCC-C
T ss_pred HHHHHhc--CCCCEEEEecCcCcHHHHHHHHhc-CCeEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEeCcHHHhcc-c
Confidence 3444444 358899999999999999999886 45899999999999999999999986 6789999999988763 5
Q ss_pred CCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCCc
Q 019957 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLT 315 (333)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf~ 315 (333)
+.||.|++... +....+|..+.++||+||.+.+.+...... ......+.+++++++.|++
T Consensus 191 ~~~D~Vi~~~p----~~~~~~l~~a~~~lk~gG~ih~~~~~~e~~----------------~~~~~~e~i~~~~~~~g~~ 250 (278)
T 3k6r_A 191 NIADRILMGYV----VRTHEFIPKALSIAKDGAIIHYHNTVPEKL----------------MPREPFETFKRITKEYGYD 250 (278)
T ss_dssp SCEEEEEECCC----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGG----------------TTTTTHHHHHHHHHHTTCE
T ss_pred cCCCEEEECCC----CcHHHHHHHHHHHcCCCCEEEEEeeecccc----------------cchhHHHHHHHHHHHcCCc
Confidence 68999987632 344567889999999999998766543211 1112346788889999997
Q ss_pred EE
Q 019957 316 NY 317 (333)
Q Consensus 316 ~v 317 (333)
+.
T Consensus 251 v~ 252 (278)
T 3k6r_A 251 VE 252 (278)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 219
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.43 E-value=3.7e-12 Score=107.55 Aligned_cols=89 Identities=15% Similarity=0.185 Sum_probs=72.2
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEe
Q 019957 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (333)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 243 (333)
..++.+|||+|||+|.++..+++.+ ..+++|+|+++.+++.++++. .++.++++|+.+++ ++||+|++
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~--------~~~~~~~~d~~~~~---~~~D~v~~ 116 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLLG-AESVTAFDIDPDAIETAKRNC--------GGVNFMVADVSEIS---GKYDTWIM 116 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHTT-BSEEEEEESCHHHHHHHHHHC--------TTSEEEECCGGGCC---CCEEEEEE
T ss_pred CCCCCEEEEEeCCccHHHHHHHHcC-CCEEEEEECCHHHHHHHHHhc--------CCCEEEECcHHHCC---CCeeEEEE
Confidence 3457799999999999999999874 447999999999999999863 36899999998875 68999999
Q ss_pred ccccccCCC--hHHHHHHHHHhc
Q 019957 244 GAALHCWPS--PSNAVAEISRIL 264 (333)
Q Consensus 244 ~~vl~h~~d--~~~~l~~~~r~L 264 (333)
+..++|+.+ ...+++++.+++
T Consensus 117 ~~p~~~~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 117 NPPFGSVVKHSDRAFIDKAFETS 139 (200)
T ss_dssp CCCC-------CHHHHHHHHHHE
T ss_pred CCCchhccCchhHHHHHHHHHhc
Confidence 999999865 347889999988
No 220
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.42 E-value=1e-12 Score=124.24 Aligned_cols=123 Identities=19% Similarity=0.234 Sum_probs=101.1
Q ss_pred cHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC
Q 019957 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (333)
Q Consensus 151 ~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (333)
.+.....+...+...++.+|||+|||+|..+..+++.++..+++++|+++.+++.+++++...++ ++.++.+|+..
T Consensus 231 qd~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~----~~~~~~~D~~~ 306 (429)
T 1sqg_A 231 QDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM----KATVKQGDGRY 306 (429)
T ss_dssp CCHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC----CCEEEECCTTC
T ss_pred eCHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC----CeEEEeCchhh
Confidence 34445566677777888999999999999999999987667999999999999999999988763 47899999988
Q ss_pred CC--CCCCCcceEEe------ccccccCCCh----------------HHHHHHHHHhccCCcEEEEEEecc
Q 019957 231 LP--FASGFVDAVHA------GAALHCWPSP----------------SNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 231 lp--~~~~~fD~V~~------~~vl~h~~d~----------------~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
++ +.+++||+|++ .+++.+.++. ..+|+++.++|||||++++++...
T Consensus 307 ~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 307 PSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp THHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred chhhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 76 55678999996 3456665553 377999999999999999988544
No 221
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.42 E-value=1.9e-12 Score=117.63 Aligned_cols=108 Identities=13% Similarity=0.144 Sum_probs=84.7
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc--CcCCCCCeEEEEccCCCC-CCCCCCcceEE
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTILTSNLALVRADVCRL-PFASGFVDAVH 242 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~--~~~~~~~i~~~~~d~~~l-p~~~~~fD~V~ 242 (333)
.+.+|||||||+|.++..+++..+..+++++|+|+.+++.|++++... ++ ..++++++.+|+.+. +..+++||+|+
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~-~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGY-EDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGG-GSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhcccc-CCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 457999999999999999998755679999999999999999987651 11 135899999998652 32357899999
Q ss_pred eccccccCC---C--hHHHHHHHHHhccCCcEEEEEEe
Q 019957 243 AGAALHCWP---S--PSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 243 ~~~vl~h~~---d--~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
+... +++. + ...+++++.++|||||++++...
T Consensus 195 ~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 231 (321)
T 2pt6_A 195 VDSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 231 (321)
T ss_dssp EECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ECCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 8643 2221 1 16889999999999999999764
No 222
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.40 E-value=1.9e-12 Score=123.48 Aligned_cols=120 Identities=18% Similarity=0.171 Sum_probs=95.8
Q ss_pred HHHHHhhccc--CCCeEEEEcCCcCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC
Q 019957 156 KMAQEYFKSA--QGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP 232 (333)
Q Consensus 156 ~~~~~~l~~~--~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp 232 (333)
..+...+... ++.+|||+|||+|..+..+++... ...|+++|+++.+++.++++++..| ..++.++.+|+..++
T Consensus 105 ~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g---~~nv~~~~~D~~~~~ 181 (479)
T 2frx_A 105 MLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCG---ISNVALTHFDGRVFG 181 (479)
T ss_dssp HHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHT---CCSEEEECCCSTTHH
T ss_pred HHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC---CCcEEEEeCCHHHhh
Confidence 3444556666 788999999999999999998742 4699999999999999999998877 457999999998875
Q ss_pred C-CCCCcceEEec------cccccCCC----------------hHHHHHHHHHhccCCcEEEEEEeccc
Q 019957 233 F-ASGFVDAVHAG------AALHCWPS----------------PSNAVAEISRILRSGGVFVGTTFLRY 278 (333)
Q Consensus 233 ~-~~~~fD~V~~~------~vl~h~~d----------------~~~~l~~~~r~LkpgG~l~i~~~~~~ 278 (333)
. .+++||+|++. +++.+.++ ...+|+++.++|||||+|++++....
T Consensus 182 ~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~ 250 (479)
T 2frx_A 182 AAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLN 250 (479)
T ss_dssp HHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCS
T ss_pred hhccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCC
Confidence 3 45789999972 34444333 23679999999999999999886554
No 223
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.38 E-value=4.3e-12 Score=108.70 Aligned_cols=102 Identities=14% Similarity=0.113 Sum_probs=82.6
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEec
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~ 244 (333)
.++.+|||||||+|.++..+. +...|+|+|+++.+++.+++.+...+ .+..+..+|+...+.+ ++||+|++.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g----~~~~~~v~D~~~~~~~-~~~DvvLll 175 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKD----WDFTFALQDVLCAPPA-EAGDLALIF 175 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTT----CEEEEEECCTTTSCCC-CBCSEEEEE
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcC----CCceEEEeecccCCCC-CCcchHHHH
Confidence 456799999999999998877 46699999999999999999987754 4788999999877654 489999999
Q ss_pred cccccCCCh-HHHHHHHHHhccCCcEEEEEE
Q 019957 245 AALHCWPSP-SNAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 245 ~vl~h~~d~-~~~l~~~~r~LkpgG~l~i~~ 274 (333)
-++||+.+. ...+-++...|+++|+++-..
T Consensus 176 k~lh~LE~q~~~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 176 KLLPLLEREQAGSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp SCHHHHHHHSTTHHHHHHHHCBCSEEEEEEE
T ss_pred HHHHHhhhhchhhHHHHHHHhcCCCEEEEcC
Confidence 888887543 223348888999997776654
No 224
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.38 E-value=6.3e-13 Score=125.84 Aligned_cols=118 Identities=17% Similarity=0.167 Sum_probs=95.0
Q ss_pred HHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-C
Q 019957 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-F 233 (333)
Q Consensus 156 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-~ 233 (333)
..+...+...++.+|||+|||+|..+..+++..+ ...|+++|+++.+++.++++++..|+ . +.++.+|+..++ +
T Consensus 91 ~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~---~-v~~~~~Da~~l~~~ 166 (464)
T 3m6w_A 91 QAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGA---P-LAVTQAPPRALAEA 166 (464)
T ss_dssp HHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCC---C-CEEECSCHHHHHHH
T ss_pred HHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---e-EEEEECCHHHhhhh
Confidence 4455566777889999999999999999998753 36899999999999999999998874 4 899999987765 2
Q ss_pred CCCCcceEEe------ccccccCCCh----------------HHHHHHHHHhccCCcEEEEEEecc
Q 019957 234 ASGFVDAVHA------GAALHCWPSP----------------SNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 234 ~~~~fD~V~~------~~vl~h~~d~----------------~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
.+++||+|++ ..++.+.++. ..+|+++.++|||||+|+++|...
T Consensus 167 ~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 167 FGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp HCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred ccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 4678999995 3344443433 578999999999999999988654
No 225
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.38 E-value=3.6e-12 Score=113.71 Aligned_cols=107 Identities=13% Similarity=0.127 Sum_probs=83.5
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc--CcC------CCCCeEEEEccCCCC-CCCC
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTI------LTSNLALVRADVCRL-PFAS 235 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~--~~~------~~~~i~~~~~d~~~l-p~~~ 235 (333)
..+.+|||||||+|.++..+++. +..+++++|+++.+++.|++++ .. ++. ..+++.++.+|+.+. +. +
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~ 150 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-N 150 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-C
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-c
Confidence 34679999999999999999988 5679999999999999999987 32 110 146899999998552 22 5
Q ss_pred CCcceEEeccccccCCC-----hHHHHHHHHHhccCCcEEEEEEe
Q 019957 236 GFVDAVHAGAALHCWPS-----PSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 236 ~~fD~V~~~~vl~h~~d-----~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
++||+|++.... ++.. ...+++++.++|+|||++++...
T Consensus 151 ~~fD~Ii~d~~~-~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 151 RGFDVIIADSTD-PVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp CCEEEEEEECCC-CC-----TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCeeEEEECCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 789999986543 2211 25789999999999999999764
No 226
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.38 E-value=4.2e-12 Score=113.32 Aligned_cols=110 Identities=14% Similarity=0.156 Sum_probs=85.7
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCc-CCCCCeEEEEccCCCC-CCCCCCcceEEe
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNT-ILTSNLALVRADVCRL-PFASGFVDAVHA 243 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~-~~~~~i~~~~~d~~~l-p~~~~~fD~V~~ 243 (333)
++.+|||||||+|.++..+++..+..+++++|+++.+++.+++++...+. ...+++.++.+|+.+. +..+++||+|++
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 157 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEE
Confidence 46799999999999999999876667999999999999999998764210 0146899999998653 223578999998
Q ss_pred ccccccCCCh----HHHHHHHHHhccCCcEEEEEEe
Q 019957 244 GAALHCWPSP----SNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 244 ~~vl~h~~d~----~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
....++.+.. ..+++++.++|||||++++...
T Consensus 158 d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 158 DSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp ECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred cCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 5443222211 5889999999999999998754
No 227
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.37 E-value=2.3e-12 Score=116.49 Aligned_cols=107 Identities=13% Similarity=0.132 Sum_probs=82.3
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc--CcCCCCCeEEEEccCCC-CCCCCCCcceEE
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTILTSNLALVRADVCR-LPFASGFVDAVH 242 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~--~~~~~~~i~~~~~d~~~-lp~~~~~fD~V~ 242 (333)
.+.+|||||||+|.++..+++..+..+++++|+++.+++.|++++... ++ ..+++.++.+|+.+ ++..+++||+|+
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~-~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGF-SHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGG-GCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhcccc-CCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 457999999999999999998766679999999999999999987643 21 14689999999865 333467899999
Q ss_pred eccccccCCCh-----HHHHHHHHHhccCCcEEEEEE
Q 019957 243 AGAALHCWPSP-----SNAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 243 ~~~vl~h~~d~-----~~~l~~~~r~LkpgG~l~i~~ 274 (333)
+... +++... ..+++++.++|+|||++++..
T Consensus 187 ~d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 187 TDSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp ECCC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred EcCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 8553 333211 578999999999999999875
No 228
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.37 E-value=1.3e-12 Score=109.75 Aligned_cols=100 Identities=17% Similarity=0.191 Sum_probs=76.5
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCC---------CeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEE-EccCCCCC-
Q 019957 164 SAQGGLLVDVSCGSGLFSRKFAKSGTY---------SGVVALDFSENMLRQCYDFIKQDNTILTSNLALV-RADVCRLP- 232 (333)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~~~~---------~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~-~~d~~~lp- 232 (333)
..++.+|||+|||+|.++..+++..+. .+++|+|+++.. . ..++.++ .+|+...+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~---~~~~~~~~~~d~~~~~~ 85 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------P---LEGATFLCPADVTDPRT 85 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------C---CTTCEEECSCCTTSHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------c---CCCCeEEEeccCCCHHH
Confidence 346789999999999999999998533 689999999831 1 3467888 88886643
Q ss_pred -------CCCCCcceEEecccccc----CCCh-------HHHHHHHHHhccCCcEEEEEEecc
Q 019957 233 -------FASGFVDAVHAGAALHC----WPSP-------SNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 233 -------~~~~~fD~V~~~~vl~h----~~d~-------~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
+++++||+|++...++. ..+. ..+++++.++|||||.+++.++..
T Consensus 86 ~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 86 SQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp HHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred HHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 33568999999665443 2333 478999999999999999987543
No 229
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.37 E-value=7.9e-13 Score=125.00 Aligned_cols=119 Identities=16% Similarity=0.155 Sum_probs=93.6
Q ss_pred HHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-C
Q 019957 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-F 233 (333)
Q Consensus 156 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-~ 233 (333)
..+...+...++.+|||+|||+|..+..++... ....|+++|+++.+++.++++++..| ..++.++.+|+..++ .
T Consensus 95 ~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g---~~nv~v~~~Da~~l~~~ 171 (456)
T 3m4x_A 95 MIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWG---VSNAIVTNHAPAELVPH 171 (456)
T ss_dssp HHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHT---CSSEEEECCCHHHHHHH
T ss_pred HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcC---CCceEEEeCCHHHhhhh
Confidence 445556677788999999999999999998763 24689999999999999999999887 457999999987764 2
Q ss_pred CCCCcceEEecc------ccccCCCh----------------HHHHHHHHHhccCCcEEEEEEecc
Q 019957 234 ASGFVDAVHAGA------ALHCWPSP----------------SNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 234 ~~~~fD~V~~~~------vl~h~~d~----------------~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
.+++||+|++.. ++.+-++. ..+|+++.++|||||+|+.+|...
T Consensus 172 ~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 172 FSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp HTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred ccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 357899999732 33322111 267999999999999999988544
No 230
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.36 E-value=2.1e-12 Score=120.31 Aligned_cols=110 Identities=16% Similarity=0.146 Sum_probs=86.0
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCC-CeEEEEccCCCC-CC---CCCCcc
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTS-NLALVRADVCRL-PF---ASGFVD 239 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~-~i~~~~~d~~~l-p~---~~~~fD 239 (333)
.++.+|||+|||+|.++..++..+ ..+|+|+|+|+.+++.|+++++.+++ .. ++.++++|+.+. +. ...+||
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n~~--~~~~v~~~~~D~~~~l~~~~~~~~~fD 287 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEANHL--DMANHQLVVMDVFDYFKYARRHHLTYD 287 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHTTC--CCTTEEEEESCHHHHHHHHHHTTCCEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCC--CccceEEEECCHHHHHHHHHHhCCCcc
Confidence 357799999999999999999865 34899999999999999999998874 33 899999998663 21 245899
Q ss_pred eEEecccc-----ccCCCh----HHHHHHHHHhccCCcEEEEEEecc
Q 019957 240 AVHAGAAL-----HCWPSP----SNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 240 ~V~~~~vl-----~h~~d~----~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
+|++.-.. .+..+. ..+++++.++|+|||.+++.....
T Consensus 288 ~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 288 IIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 334 (385)
T ss_dssp EEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred EEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 99984332 233333 356778899999999999987544
No 231
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.36 E-value=1.9e-12 Score=118.00 Aligned_cols=109 Identities=17% Similarity=0.188 Sum_probs=85.4
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc--CcCCCCCeEEEEccCCCC-C-CCCCCcce
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTILTSNLALVRADVCRL-P-FASGFVDA 240 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~--~~~~~~~i~~~~~d~~~l-p-~~~~~fD~ 240 (333)
..+.+|||||||+|.++..+++..+..+|+++|+|+.+++.|++++... ++ ..+++.++.+|+.+. + +.+++||+
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl-~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGY-EDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGG-GSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhcccc-CCCcEEEEECCHHHHHHhccCCCccE
Confidence 3467999999999999999998766679999999999999999987642 21 146899999998653 2 33578999
Q ss_pred EEecccc--ccCCC--hHHHHHHHHHhccCCcEEEEEE
Q 019957 241 VHAGAAL--HCWPS--PSNAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 241 V~~~~vl--~h~~d--~~~~l~~~~r~LkpgG~l~i~~ 274 (333)
|++.... ++..+ ...+++++.++|||||+|++..
T Consensus 198 Ii~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 198 VIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 9985432 11111 3688999999999999999964
No 232
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.36 E-value=8.3e-12 Score=114.57 Aligned_cols=145 Identities=11% Similarity=0.082 Sum_probs=107.8
Q ss_pred CCCcHHHHHHHHHhh----cccCCCeEEEEcCCcCHHHHHHHHhCCC-----CeEEEEeCCHHHHHHHHHHHHhcCcCCC
Q 019957 148 FPGPDEEFKMAQEYF----KSAQGGLLVDVSCGSGLFSRKFAKSGTY-----SGVVALDFSENMLRQCYDFIKQDNTILT 218 (333)
Q Consensus 148 ~~~~~~~~~~~~~~l----~~~~~~~vLDiGcG~G~~~~~l~~~~~~-----~~v~g~D~s~~~~~~a~~~~~~~~~~~~ 218 (333)
++.+......+...+ .+.++.+|||+|||+|.++..+.+..+. .+++|+|+++.+++.|+.++...++
T Consensus 108 ~~TP~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--- 184 (344)
T 2f8l_A 108 QMTPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--- 184 (344)
T ss_dssp CCCCHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC---
T ss_pred CCChHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC---
Confidence 566766655544443 3345679999999999999988877532 5899999999999999998877652
Q ss_pred CCeEEEEccCCCCCCCCCCcceEEeccccccCCChH------------------HHHHHHHHhccCCcEEEEEEecccCC
Q 019957 219 SNLALVRADVCRLPFASGFVDAVHAGAALHCWPSPS------------------NAVAEISRILRSGGVFVGTTFLRYTS 280 (333)
Q Consensus 219 ~~i~~~~~d~~~lp~~~~~fD~V~~~~vl~h~~d~~------------------~~l~~~~r~LkpgG~l~i~~~~~~~~ 280 (333)
++.++.+|..... ..++||+|+++-.+.++++.. .++..+.+.|||||++++.+++...
T Consensus 185 -~~~i~~~D~l~~~-~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~- 261 (344)
T 2f8l_A 185 -KMTLLHQDGLANL-LVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMF- 261 (344)
T ss_dssp -CCEEEESCTTSCC-CCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGG-
T ss_pred -CceEEECCCCCcc-ccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhc-
Confidence 6889999986633 357899999987766654332 5799999999999999999875420
Q ss_pred CcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCCc
Q 019957 281 STSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLT 315 (333)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf~ 315 (333)
..-...++++.+.+.|+.
T Consensus 262 -----------------~~~~~~~ir~~l~~~~~~ 279 (344)
T 2f8l_A 262 -----------------GTSDFAKVDKFIKKNGHI 279 (344)
T ss_dssp -----------------GSTTHHHHHHHHHHHEEE
T ss_pred -----------------CCchHHHHHHHHHhCCeE
Confidence 001236777777777763
No 233
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.36 E-value=5e-12 Score=106.24 Aligned_cols=98 Identities=16% Similarity=0.279 Sum_probs=74.8
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCC-------C-
Q 019957 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA-------S- 235 (333)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~-------~- 235 (333)
..++.+|||+|||+|.++..+++. ..+|+|+|+++.. . ..++.++++|+.+.+.. .
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~-----------~---~~~v~~~~~D~~~~~~~~~~~~~~~~ 86 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME-----------E---IAGVRFIRCDIFKETIFDDIDRALRE 86 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC-----------C---CTTCEEEECCTTSSSHHHHHHHHHHH
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc-----------c---CCCeEEEEccccCHHHHHHHHHHhhc
Confidence 356789999999999999999988 4499999998741 1 45899999999876521 1
Q ss_pred ---CCcceEEeccccccCC----C-------hHHHHHHHHHhccCCcEEEEEEecc
Q 019957 236 ---GFVDAVHAGAALHCWP----S-------PSNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 236 ---~~fD~V~~~~vl~h~~----d-------~~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
++||+|++........ | ...+++.+.++|||||.|++..+..
T Consensus 87 ~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~ 142 (191)
T 3dou_A 87 EGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQG 142 (191)
T ss_dssp HTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred ccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCC
Confidence 4899999965432211 1 2467889999999999999877543
No 234
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.34 E-value=2.3e-12 Score=116.16 Aligned_cols=111 Identities=15% Similarity=0.152 Sum_probs=85.1
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHh--cCcCCCCCeEEEEccCCC-CCCCCCCcceE
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQ--DNTILTSNLALVRADVCR-LPFASGFVDAV 241 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~--~~~~~~~~i~~~~~d~~~-lp~~~~~fD~V 241 (333)
..+.+|||||||+|.++..+++..+..+++++|+++.+++.|++++.. .++ ..++++++.+|+.+ ++..+++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~-~~~rv~v~~~Da~~~l~~~~~~fD~I 172 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGY-SSSKLTLHVGDGFEFMKQNQDAFDVI 172 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGG-GCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhccc-CCCcEEEEECcHHHHHhhCCCCceEE
Confidence 346799999999999999999886667999999999999999998764 221 14689999999865 33346789999
Q ss_pred EeccccccCC----ChHHHHHHHHHhccCCcEEEEEEec
Q 019957 242 HAGAALHCWP----SPSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 242 ~~~~vl~h~~----d~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
++....+..+ ....+++++.++|||||++++....
T Consensus 173 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 173 ITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp EEECC-----------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 9865432211 1246899999999999999997643
No 235
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.34 E-value=9.1e-12 Score=116.51 Aligned_cols=110 Identities=16% Similarity=0.182 Sum_probs=88.9
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCC-CeEEEEccCCCCCC----CCCCcc
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTS-NLALVRADVCRLPF----ASGFVD 239 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~-~i~~~~~d~~~lp~----~~~~fD 239 (333)
.++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.+++.|++++..+++ .. ++.++.+|+.+... ..++||
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ngl--~~~~v~~~~~D~~~~~~~~~~~~~~fD 295 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNKL--DLSKAEFVRDDVFKLLRTYRDRGEKFD 295 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTC--CGGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCC--CccceEEEECCHHHHHHHHHhcCCCCC
Confidence 457799999999999999999986 45899999999999999999988762 03 79999999876421 146899
Q ss_pred eEEecc---------ccccCCChHHHHHHHHHhccCCcEEEEEEecc
Q 019957 240 AVHAGA---------ALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 240 ~V~~~~---------vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
+|++.- +.++..+...++.++.++|+|||++++.+...
T Consensus 296 ~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 296 VIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp EEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred EEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 999863 23333556788999999999999999987543
No 236
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.34 E-value=1.1e-11 Score=109.27 Aligned_cols=99 Identities=12% Similarity=0.069 Sum_probs=82.4
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc--CcCCCCCeEEEEccCCCCCCCCCCcceEEe
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTILTSNLALVRADVCRLPFASGFVDAVHA 243 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~--~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 243 (333)
.+.+|||||||+|.++..+.+. + .+++++|+++.+++.|++++... ++ ..+++.++.+|..+.. ++||+|++
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~-~~~rv~~~~~D~~~~~---~~fD~Ii~ 145 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVK-NNKNFTHAKQLLDLDI---KKYDLIFC 145 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHH-TCTTEEEESSGGGSCC---CCEEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhcccc-CCCeEEEEechHHHHH---hhCCEEEE
Confidence 4579999999999999999887 5 79999999999999998875431 11 1468999999997764 68999998
Q ss_pred ccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 244 GAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 244 ~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
. ..+|..+++++.++|||||++++...
T Consensus 146 d-----~~dp~~~~~~~~~~L~pgG~lv~~~~ 172 (262)
T 2cmg_A 146 L-----QEPDIHRIDGLKRMLKEDGVFISVAK 172 (262)
T ss_dssp S-----SCCCHHHHHHHHTTEEEEEEEEEEEE
T ss_pred C-----CCChHHHHHHHHHhcCCCcEEEEEcC
Confidence 6 35778899999999999999999653
No 237
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.34 E-value=5.8e-13 Score=118.28 Aligned_cols=104 Identities=20% Similarity=0.215 Sum_probs=77.3
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHH-hcCcCCCCCeEEE--EccCCCCCCCCCCcce
Q 019957 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIK-QDNTILTSNLALV--RADVCRLPFASGFVDA 240 (333)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~-~~~~~~~~~i~~~--~~d~~~lp~~~~~fD~ 240 (333)
..++.+|||+|||+|.++..+++. .+|+|+|+++ ++..++++.. .... ..++.++ ++|+..++ +++||+
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~~~~~~~~--~~~v~~~~~~~D~~~l~--~~~fD~ 151 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEKPRLVETF--GWNLITFKSKVDVTKME--PFQADT 151 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCCCCCCCCT--TGGGEEEECSCCGGGCC--CCCCSE
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhchhhhhhc--CCCeEEEeccCcHhhCC--CCCcCE
Confidence 346789999999999999999987 3899999998 5433322100 0000 1168899 89998877 679999
Q ss_pred EEeccccccCCChH-------HHHHHHHHhccCCc--EEEEEEec
Q 019957 241 VHAGAALHCWPSPS-------NAVAEISRILRSGG--VFVGTTFL 276 (333)
Q Consensus 241 V~~~~vl~h~~d~~-------~~l~~~~r~LkpgG--~l~i~~~~ 276 (333)
|++..+ ++..++. .+|+++.++||||| .|++.++.
T Consensus 152 Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 152 VLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp EEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred EEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 999877 5554431 37899999999999 99987655
No 238
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.33 E-value=7.8e-13 Score=116.80 Aligned_cols=104 Identities=18% Similarity=0.185 Sum_probs=77.1
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHH-HhcCcCCCCCeEEE--EccCCCCCCCCCCcce
Q 019957 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFI-KQDNTILTSNLALV--RADVCRLPFASGFVDA 240 (333)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~-~~~~~~~~~~i~~~--~~d~~~lp~~~~~fD~ 240 (333)
..++.+|||+|||+|.++..+++. .+|+|+|+++ ++..+++.. ..... ..++.++ ++|+..++ +++||+
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~~~~~~~~--~~~v~~~~~~~D~~~l~--~~~fD~ 143 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEVPRITESY--GWNIVKFKSRVDIHTLP--VERTDV 143 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCCCCCCCBT--TGGGEEEECSCCTTTSC--CCCCSE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhhhhhhhcc--CCCeEEEecccCHhHCC--CCCCcE
Confidence 346789999999999999999887 3899999998 532222110 00000 1168888 89998876 679999
Q ss_pred EEeccccccCCChH-------HHHHHHHHhccCCc--EEEEEEec
Q 019957 241 VHAGAALHCWPSPS-------NAVAEISRILRSGG--VFVGTTFL 276 (333)
Q Consensus 241 V~~~~vl~h~~d~~-------~~l~~~~r~LkpgG--~l~i~~~~ 276 (333)
|++..+ ++..++. .+|+++.++||||| .|++.++.
T Consensus 144 V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 144 IMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp EEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred EEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 999877 5554431 37899999999999 99997755
No 239
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.32 E-value=4e-12 Score=118.97 Aligned_cols=109 Identities=16% Similarity=0.147 Sum_probs=88.5
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCC----CCCCcceE
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF----ASGFVDAV 241 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~----~~~~fD~V 241 (333)
++.+|||+|||+|.++..+++.+ ..+|+|+|+++.+++.+++++..+++ ..++.++.+|+.+... ..++||+|
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g-~~~v~~vD~s~~~l~~a~~n~~~n~~--~~~v~~~~~d~~~~~~~~~~~~~~fD~V 293 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAG-ADEVIGIDKSPRAIETAKENAKLNGV--EDRMKFIVGSAFEEMEKLQKKGEKFDIV 293 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTC--GGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCC--CccceEEECCHHHHHHHHHhhCCCCCEE
Confidence 57899999999999999999874 45899999999999999999988774 3389999999876531 25689999
Q ss_pred Eeccc---------cccCCChHHHHHHHHHhccCCcEEEEEEecc
Q 019957 242 HAGAA---------LHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 242 ~~~~v---------l~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
++.-. .++..+...++.++.++|+|||.+++.+...
T Consensus 294 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 294 VLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp EECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred EECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 98532 2222445678999999999999999988654
No 240
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.31 E-value=5.4e-12 Score=117.47 Aligned_cols=107 Identities=20% Similarity=0.272 Sum_probs=86.3
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCC----CCCCcceE
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF----ASGFVDAV 241 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~----~~~~fD~V 241 (333)
++.+|||+|||+|.++..++.. ..+|+|+|+|+.+++.|++++..++ ..++.++.+|+.+... .+++||+|
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~---~~~~~~~~~d~~~~~~~~~~~~~~fD~I 283 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNG---LGNVRVLEANAFDLLRRLEKEGERFDLV 283 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTT---CTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcC---CCCceEEECCHHHHHHHHHhcCCCeeEE
Confidence 5679999999999999999987 3489999999999999999999887 3459999999876531 15689999
Q ss_pred Eecccc---------ccCCChHHHHHHHHHhccCCcEEEEEEecc
Q 019957 242 HAGAAL---------HCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 242 ~~~~vl---------~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
++.-.. .+..+...++.++.++|+|||.+++.+...
T Consensus 284 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 284 VLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp EECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred EECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 984321 112334578999999999999999988654
No 241
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.31 E-value=1.7e-12 Score=113.47 Aligned_cols=115 Identities=9% Similarity=0.144 Sum_probs=85.4
Q ss_pred cHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC
Q 019957 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (333)
Q Consensus 151 ~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (333)
.....+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.+++++.. ..++.++.+|+.+
T Consensus 15 d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~-----~~~v~~~~~D~~~ 87 (244)
T 1qam_A 15 SKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCN--FVTAIEIDHKLCKTTENKLVD-----HDNFQVLNKDILQ 87 (244)
T ss_dssp CHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHSS--EEEEECSCHHHHHHHHHHTTT-----CCSEEEECCCGGG
T ss_pred CHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcCC--eEEEEECCHHHHHHHHHhhcc-----CCCeEEEEChHHh
Confidence 345567777777777788999999999999999999874 999999999999999988654 3589999999999
Q ss_pred CCCCC-CCcceEEe----------ccccccCCChHHHH----HHHHHhccCCcEEEE
Q 019957 231 LPFAS-GFVDAVHA----------GAALHCWPSPSNAV----AEISRILRSGGVFVG 272 (333)
Q Consensus 231 lp~~~-~~fD~V~~----------~~vl~h~~d~~~~l----~~~~r~LkpgG~l~i 272 (333)
+++++ ..|++|.. ...++|...+..++ +.+.|+++++|.+.+
T Consensus 88 ~~~~~~~~~~vv~nlPy~~~~~~l~~~l~~~~~~~~~lm~q~e~a~rll~~~G~l~v 144 (244)
T 1qam_A 88 FKFPKNQSYKIFGNIPYNISTDIIRKIVFDSIADEIYLIVEYGFAKRLLNTKRSLAL 144 (244)
T ss_dssp CCCCSSCCCEEEEECCGGGHHHHHHHHHHSCCCSEEEEEEEHHHHHHHTCTTSHHHH
T ss_pred CCcccCCCeEEEEeCCcccCHHHHHHHHhcCCCCeEEEEEEHHHHHHHhcCCcchhH
Confidence 88764 45643321 23344444444444 447888888886433
No 242
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.27 E-value=7.2e-11 Score=111.60 Aligned_cols=112 Identities=16% Similarity=0.222 Sum_probs=85.7
Q ss_pred HHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC---
Q 019957 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR--- 230 (333)
Q Consensus 154 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~--- 230 (333)
..+.+.+.+...++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++++..++ ..++.++.+|+.+
T Consensus 274 l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~~--~~V~gvD~s~~al~~A~~n~~~~~---~~~v~f~~~d~~~~l~ 348 (433)
T 1uwv_A 274 MVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQA--ASVVGVEGVPALVEKGQQNARLNG---LQNVTFYHENLEEDVT 348 (433)
T ss_dssp HHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTT---CCSEEEEECCTTSCCS
T ss_pred HHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhhC--CEEEEEeCCHHHHHHHHHHHHHcC---CCceEEEECCHHHHhh
Confidence 34555566666667899999999999999999884 499999999999999999998877 4589999999977
Q ss_pred -CCCCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEE
Q 019957 231 -LPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 231 -lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 274 (333)
+++.+++||+|++.---... ..+++.+.+ ++|+++++++.
T Consensus 349 ~~~~~~~~fD~Vv~dPPr~g~---~~~~~~l~~-~~p~~ivyvsc 389 (433)
T 1uwv_A 349 KQPWAKNGFDKVLLDPARAGA---AGVMQQIIK-LEPIRIVYVSC 389 (433)
T ss_dssp SSGGGTTCCSEEEECCCTTCC---HHHHHHHHH-HCCSEEEEEES
T ss_pred hhhhhcCCCCEEEECCCCccH---HHHHHHHHh-cCCCeEEEEEC
Confidence 34556789999984322111 244555543 68988888754
No 243
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.26 E-value=1.5e-11 Score=122.68 Aligned_cols=108 Identities=18% Similarity=0.214 Sum_probs=89.2
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCC-CCeEEEEccCCC-CCCCCCCcceEEe
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILT-SNLALVRADVCR-LPFASGFVDAVHA 243 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~-~~i~~~~~d~~~-lp~~~~~fD~V~~ 243 (333)
++.+|||+|||+|.++..++..+ ..+|+++|+|+.+++.+++++..+++ . .++.++++|+.+ ++...++||+|++
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~g-a~~V~aVD~s~~al~~a~~N~~~ngl--~~~~v~~i~~D~~~~l~~~~~~fD~Ii~ 615 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGG-ARSTTTVDMSRTYLEWAERNLRLNGL--TGRAHRLIQADCLAWLREANEQFDLIFI 615 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTC--CSTTEEEEESCHHHHHHHCCCCEEEEEE
T ss_pred CCCcEEEeeechhHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCC--CccceEEEecCHHHHHHhcCCCccEEEE
Confidence 57899999999999999998866 34799999999999999999998875 3 479999999976 3444678999998
Q ss_pred cc-----------ccccCCChHHHHHHHHHhccCCcEEEEEEec
Q 019957 244 GA-----------ALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 244 ~~-----------vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
.- ++++..+...+++.+.++|+|||+|++.+..
T Consensus 616 DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 616 DPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp CCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 43 2333445567899999999999999987754
No 244
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.25 E-value=5e-11 Score=110.97 Aligned_cols=106 Identities=16% Similarity=0.073 Sum_probs=82.5
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC-CCCCCCcceEEec
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-PFASGFVDAVHAG 244 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-p~~~~~fD~V~~~ 244 (333)
++.+|||+|||+|.++..++..+. .|+++|+|+.+++.++++++.+++ . ..+.++|+.+. +...+.||+|++.
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga--~V~avDis~~al~~a~~n~~~ng~--~--~~~~~~D~~~~l~~~~~~fD~Ii~d 287 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGA--YALAVDKDLEALGVLDQAALRLGL--R--VDIRHGEALPTLRGLEGPFHHVLLD 287 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHTC--C--CEEEESCHHHHHHTCCCCEEEEEEC
T ss_pred CCCeEEEcccchhHHHHHHHHcCC--eEEEEECCHHHHHHHHHHHHHhCC--C--CcEEEccHHHHHHHhcCCCCEEEEC
Confidence 478999999999999999999875 699999999999999999988874 2 35668888663 2213349999985
Q ss_pred ccccc---------CCChHHHHHHHHHhccCCcEEEEEEecc
Q 019957 245 AALHC---------WPSPSNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 245 ~vl~h---------~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
-...+ ..+...+++.+.++|||||.|++.+...
T Consensus 288 pP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 288 PPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp CCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 43211 1233578899999999999999877554
No 245
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.24 E-value=4.1e-11 Score=113.70 Aligned_cols=147 Identities=15% Similarity=0.130 Sum_probs=110.1
Q ss_pred cchhHHHHhhHHhhc-----ccCCCCCcHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhC-------------CC
Q 019957 129 PFVSFLYERGWRQNF-----NRSGFPGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSG-------------TY 190 (333)
Q Consensus 129 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-------------~~ 190 (333)
..++..|+....+.. ....++.+....+.+.+.+.+.++.+|||+|||+|.++..+.+.. ..
T Consensus 129 d~~G~~yE~ll~~~~~~~~~~~G~fyTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~ 208 (445)
T 2okc_A 129 DVKGAIYESILEKNGQDKKSGAGQYFTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRD 208 (445)
T ss_dssp HHHHHHHHHHHHHHHTCTTTCCGGGCCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhccccCCcccCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcC
Confidence 344555665544422 122467888889999999888778899999999999998887642 13
Q ss_pred CeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEeccccccCCC-----------------h
Q 019957 191 SGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAALHCWPS-----------------P 253 (333)
Q Consensus 191 ~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~vl~h~~d-----------------~ 253 (333)
..++|+|+++.+++.|+.++...|+. ..++.+.++|....+.. .+||+|+++-.+.+... .
T Consensus 209 ~~i~G~Ei~~~~~~lA~~nl~l~g~~-~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~ 286 (445)
T 2okc_A 209 KALHGVDNTPLVVTLASMNLYLHGIG-TDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQ 286 (445)
T ss_dssp TTEEEEESCHHHHHHHHHHHHHTTCC-SSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHH
T ss_pred eEEEEEeCCHHHHHHHHHHHHHhCCC-cCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchH
Confidence 47999999999999999988776631 11677899998776543 48999999866554321 1
Q ss_pred HHHHHHHHHhccCCcEEEEEEecc
Q 019957 254 SNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 254 ~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
..+++.+.++|||||++.+..+..
T Consensus 287 ~~fl~~~~~~Lk~gG~~a~V~p~~ 310 (445)
T 2okc_A 287 LNFLQHMMLMLKTGGRAAVVLPDN 310 (445)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred HHHHHHHHHHhccCCEEEEEECCc
Confidence 378999999999999999988753
No 246
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.23 E-value=9.1e-11 Score=110.40 Aligned_cols=118 Identities=18% Similarity=0.211 Sum_probs=90.9
Q ss_pred CCCCcHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEE
Q 019957 147 GFPGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVR 225 (333)
Q Consensus 147 ~~~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~ 225 (333)
.++.+....+.+.+.+...++.+|||+|||+|.++..+++.. +..+++|+|+++.+++.| .++.+++
T Consensus 20 ~~~TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a------------~~~~~~~ 87 (421)
T 2ih2_A 20 RVETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP------------PWAEGIL 87 (421)
T ss_dssp -CCCCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC------------TTEEEEE
T ss_pred eEeCCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC------------CCCcEEe
Confidence 356677888888888876556799999999999999998863 456999999999987655 2688999
Q ss_pred ccCCCCCCCCCCcceEEeccccc----------cCCCh-------------------HHHHHHHHHhccCCcEEEEEEec
Q 019957 226 ADVCRLPFASGFVDAVHAGAALH----------CWPSP-------------------SNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 226 ~d~~~lp~~~~~fD~V~~~~vl~----------h~~d~-------------------~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
+|+...+. .++||+|+++--.. |+.+. ..+++.+.++|+|||.+++..+.
T Consensus 88 ~D~~~~~~-~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 88 ADFLLWEP-GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp SCGGGCCC-SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred CChhhcCc-cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 99987653 46899999952221 12111 15688999999999999999876
Q ss_pred c
Q 019957 277 R 277 (333)
Q Consensus 277 ~ 277 (333)
.
T Consensus 167 ~ 167 (421)
T 2ih2_A 167 T 167 (421)
T ss_dssp G
T ss_pred H
Confidence 4
No 247
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.22 E-value=5.4e-11 Score=106.97 Aligned_cols=110 Identities=17% Similarity=0.265 Sum_probs=81.4
Q ss_pred cHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC
Q 019957 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (333)
Q Consensus 151 ~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (333)
.....+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+++.+++.+++++...+ ..++.++.+|+..
T Consensus 27 ~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~~~--~v~~vDi~~~~~~~a~~~~~~~~---~~~v~~~~~D~~~ 101 (299)
T 2h1r_A 27 NPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAK--KVITIDIDSRMISEVKKRCLYEG---YNNLEVYEGDAIK 101 (299)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTTSS--EEEEECSCHHHHHHHHHHHHHTT---CCCEEC----CCS
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhcCC--EEEEEECCHHHHHHHHHHHHHcC---CCceEEEECchhh
Confidence 344556777777777788999999999999999998754 99999999999999999887655 4689999999988
Q ss_pred CCCCCCCcceEEeccccccCCChH--HHH---------------HHHHHhccCCc
Q 019957 231 LPFASGFVDAVHAGAALHCWPSPS--NAV---------------AEISRILRSGG 268 (333)
Q Consensus 231 lp~~~~~fD~V~~~~vl~h~~d~~--~~l---------------~~~~r~LkpgG 268 (333)
+++. +||+|+++...+ +..+. ..+ +.+.|+++++|
T Consensus 102 ~~~~--~~D~Vv~n~py~-~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G 153 (299)
T 2h1r_A 102 TVFP--KFDVCTANIPYK-ISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVG 153 (299)
T ss_dssp SCCC--CCSEEEEECCGG-GHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTT
T ss_pred CCcc--cCCEEEEcCCcc-cccHHHHHHHhcCCccceeeehHHHHHHHHHhcCCC
Confidence 8754 899999864433 22221 222 44678888877
No 248
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.21 E-value=8.5e-14 Score=121.78 Aligned_cols=113 Identities=11% Similarity=0.167 Sum_probs=87.6
Q ss_pred HHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCC
Q 019957 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (333)
Q Consensus 154 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~ 233 (333)
..+.+.+.+...++.+|||||||+|.++..+++.+ .+++|+|+|+.+++.++++... ..++.++.+|+.++++
T Consensus 17 ~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~~-----~~~v~~~~~D~~~~~~ 89 (245)
T 1yub_A 17 VLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLKL-----NTRVTLIHQDILQFQF 89 (245)
T ss_dssp THHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTTT-----CSEEEECCSCCTTTTC
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhcc-----CCceEEEECChhhcCc
Confidence 44666667776678899999999999999999987 4999999999999888876542 4579999999999887
Q ss_pred CC-CCcceEEec-----------cccccCCChHHHH----HHHHHhccCCcEEEEEE
Q 019957 234 AS-GFVDAVHAG-----------AALHCWPSPSNAV----AEISRILRSGGVFVGTT 274 (333)
Q Consensus 234 ~~-~~fD~V~~~-----------~vl~h~~d~~~~l----~~~~r~LkpgG~l~i~~ 274 (333)
.+ ++| .|+++ .+++|..++...+ +.+.++|+|||.+++..
T Consensus 90 ~~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 90 PNKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp CCSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred ccCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 63 678 55554 2234444555556 77999999999887654
No 249
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.21 E-value=7.9e-11 Score=107.66 Aligned_cols=101 Identities=19% Similarity=0.195 Sum_probs=84.8
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEec
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~ 244 (333)
.++.+|||+|||+|.++.. ++ + ..+|+++|+|+.+++.+++++..+++ ..++.++.+|+.+.. ++||+|++.
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~-~-~~~V~~vD~s~~ai~~a~~n~~~n~l--~~~v~~~~~D~~~~~---~~fD~Vi~d 265 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK-N-AKKIYAIDINPHAIELLKKNIKLNKL--EHKIIPILSDVREVD---VKGNRVIMN 265 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT-T-SSEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCGGGCC---CCEEEEEEC
T ss_pred CCCCEEEEccCccCHHHHh-cc-C-CCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEECChHHhc---CCCcEEEEC
Confidence 3578999999999999999 76 3 56999999999999999999998874 468999999998875 789999985
Q ss_pred cccccCCChHHHHHHHHHhccCCcEEEEEEecc
Q 019957 245 AALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 245 ~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
-.- ....+++.+.++|+|||.+++.+...
T Consensus 266 pP~----~~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 266 LPK----FAHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp CTT----TGGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred CcH----hHHHHHHHHHHHcCCCCEEEEEEeec
Confidence 321 12377999999999999999988654
No 250
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.21 E-value=4.2e-11 Score=106.65 Aligned_cols=117 Identities=12% Similarity=-0.026 Sum_probs=84.4
Q ss_pred cccCCCeEEEEcCCc------CHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEE-EEccCCCCCCC
Q 019957 163 KSAQGGLLVDVSCGS------GLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLAL-VRADVCRLPFA 234 (333)
Q Consensus 163 ~~~~~~~vLDiGcG~------G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~-~~~d~~~lp~~ 234 (333)
...++.+|||+|||+ |. ..+++..+ ..+|+|+|+++. + .++.+ +++|+.++++.
T Consensus 60 ~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v---------------~~v~~~i~gD~~~~~~~ 121 (290)
T 2xyq_A 60 AVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V---------------SDADSTLIGDCATVHTA 121 (290)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B---------------CSSSEEEESCGGGCCCS
T ss_pred CCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C---------------CCCEEEEECccccCCcc
Confidence 345678999999944 66 44444433 569999999987 1 14678 99999887764
Q ss_pred CCCcceEEecccccc--------C---CChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHH
Q 019957 235 SGFVDAVHAGAALHC--------W---PSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEE 303 (333)
Q Consensus 235 ~~~fD~V~~~~vl~h--------~---~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 303 (333)
++||+|++....+. . .....+++++.++|||||.|++.++... ..+
T Consensus 122 -~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~----------------------~~~ 178 (290)
T 2xyq_A 122 -NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS----------------------WNA 178 (290)
T ss_dssp -SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS----------------------CCH
T ss_pred -CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccC----------------------CHH
Confidence 68999999643221 1 1124789999999999999999764321 224
Q ss_pred HHHHHHHhCCCcEEEEE
Q 019957 304 EIEDLCTSCGLTNYTSK 320 (333)
Q Consensus 304 ~l~~ll~~aGf~~v~~~ 320 (333)
++.+++++.||..++..
T Consensus 179 ~l~~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 179 DLYKLMGHFSWWTAFVT 195 (290)
T ss_dssp HHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHcCCcEEEEE
Confidence 78889999999877653
No 251
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.20 E-value=8.6e-11 Score=105.03 Aligned_cols=89 Identities=12% Similarity=0.228 Sum_probs=77.1
Q ss_pred cHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC
Q 019957 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (333)
Q Consensus 151 ~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (333)
.....+.+.+.+...++.+|||||||+|.++..+++.+. +|+++|+++.+++.+++++.. ..++.++.+|+.+
T Consensus 35 d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~~--~V~aVEid~~li~~a~~~~~~-----~~~v~vi~gD~l~ 107 (295)
T 3gru_A 35 DKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAK--KVYVIEIDKSLEPYANKLKEL-----YNNIEIIWGDALK 107 (295)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSS--EEEEEESCGGGHHHHHHHHHH-----CSSEEEEESCTTT
T ss_pred CHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcCC--EEEEEECCHHHHHHHHHHhcc-----CCCeEEEECchhh
Confidence 345567778888777888999999999999999999864 999999999999999998774 5689999999999
Q ss_pred CCCCCCCcceEEeccc
Q 019957 231 LPFASGFVDAVHAGAA 246 (333)
Q Consensus 231 lp~~~~~fD~V~~~~v 246 (333)
+++++..||+|+++..
T Consensus 108 ~~~~~~~fD~Iv~NlP 123 (295)
T 3gru_A 108 VDLNKLDFNKVVANLP 123 (295)
T ss_dssp SCGGGSCCSEEEEECC
T ss_pred CCcccCCccEEEEeCc
Confidence 8888778999998744
No 252
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.19 E-value=8.4e-12 Score=112.44 Aligned_cols=103 Identities=15% Similarity=0.118 Sum_probs=74.2
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeC----CHHHHHHHHHHHHhcCcCCCCCeEEEEc-cCCCCCCCCCCcc
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDF----SENMLRQCYDFIKQDNTILTSNLALVRA-DVCRLPFASGFVD 239 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~----s~~~~~~a~~~~~~~~~~~~~~i~~~~~-d~~~lp~~~~~fD 239 (333)
.++.+|||+|||+|.++..+++. .+|+|+|+ ++.+++... ....+ .+++.++++ |+..++ .++||
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~~--~~~~~---~~~v~~~~~~D~~~l~--~~~fD 150 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPIP--MSTYG---WNLVRLQSGVDVFFIP--PERCD 150 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCCC--CCSTT---GGGEEEECSCCTTTSC--CCCCS
T ss_pred CCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHHH--hhhcC---CCCeEEEeccccccCC--cCCCC
Confidence 45779999999999999999987 28999999 554332111 01111 257899998 888776 56899
Q ss_pred eEEeccccc---cCCChH---HHHHHHHHhccCCcEEEEEEecc
Q 019957 240 AVHAGAALH---CWPSPS---NAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 240 ~V~~~~vl~---h~~d~~---~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
+|++..+.. +..+.. .+|.++.++|||||.|++.++..
T Consensus 151 ~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 151 TLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp EEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred EEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 999976653 222222 47899999999999999876544
No 253
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.17 E-value=1.5e-10 Score=107.84 Aligned_cols=127 Identities=11% Similarity=0.034 Sum_probs=97.0
Q ss_pred CCCcHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCC-------------------------------------
Q 019957 148 FPGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTY------------------------------------- 190 (333)
Q Consensus 148 ~~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~------------------------------------- 190 (333)
-|..+.....+.......++..|||.+||+|.++..++..+.+
T Consensus 183 Apl~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~ 262 (393)
T 3k0b_A 183 APIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQ 262 (393)
T ss_dssp CSCCHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTC
T ss_pred CCCcHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccC
Confidence 3455666677777777677889999999999999888765432
Q ss_pred -CeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEeccccc-cC---CChHHHHHHHHHhcc
Q 019957 191 -SGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAALH-CW---PSPSNAVAEISRILR 265 (333)
Q Consensus 191 -~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~vl~-h~---~d~~~~l~~~~r~Lk 265 (333)
.+++|+|+++.+++.|++++...|+ ...+.++++|+.+++.. .+||+|+++--.. .+ .+...+.+++.+.||
T Consensus 263 ~~~V~GvDid~~al~~Ar~Na~~~gl--~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk 339 (393)
T 3k0b_A 263 PLNIIGGDIDARLIEIAKQNAVEAGL--GDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYK 339 (393)
T ss_dssp CCCEEEEESCHHHHHHHHHHHHHTTC--TTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEECCHHHHHHHHHHHHHcCC--CCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHh
Confidence 4699999999999999999998885 45799999999988764 5899999973321 11 123345666667777
Q ss_pred C--CcEEEEEEecc
Q 019957 266 S--GGVFVGTTFLR 277 (333)
Q Consensus 266 p--gG~l~i~~~~~ 277 (333)
+ ||.+++.+...
T Consensus 340 ~~~g~~~~iit~~~ 353 (393)
T 3k0b_A 340 RMPTWSVYVLTSYE 353 (393)
T ss_dssp TCTTCEEEEEECCT
T ss_pred cCCCCEEEEEECCH
Confidence 6 99999988654
No 254
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.17 E-value=4.4e-10 Score=105.74 Aligned_cols=100 Identities=17% Similarity=0.174 Sum_probs=79.5
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEe
Q 019957 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (333)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 243 (333)
..++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|++++..+++ . +.++.+|+.++... +||+|++
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~~~--~V~gvD~s~~ai~~A~~n~~~ngl---~-v~~~~~d~~~~~~~--~fD~Vv~ 359 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKRGF--NVKGFDSNEFAIEMARRNVEINNV---D-AEFEVASDREVSVK--GFDTVIV 359 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHTC---C-EEEEECCTTTCCCT--TCSEEEE
T ss_pred cCCCCEEEEeeccchHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcCC---c-EEEEECChHHcCcc--CCCEEEE
Confidence 34577999999999999999998754 999999999999999999988763 4 99999999887532 8999998
Q ss_pred ccccccCCChHHHHHHHHHhccCCcEEEEEE
Q 019957 244 GAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 244 ~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 274 (333)
.-.-... ...+++.+. .|+|||+++++.
T Consensus 360 dPPr~g~--~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 360 DPPRAGL--HPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp CCCTTCS--CHHHHHHHH-HHCCSEEEEEES
T ss_pred cCCccch--HHHHHHHHH-hcCCCcEEEEEC
Confidence 5432111 134566664 599999999865
No 255
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.16 E-value=2.9e-10 Score=105.48 Aligned_cols=126 Identities=13% Similarity=0.051 Sum_probs=97.6
Q ss_pred CCcHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCC--------------------------------------
Q 019957 149 PGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTY-------------------------------------- 190 (333)
Q Consensus 149 ~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~-------------------------------------- 190 (333)
|..+.....+.......++..|||.+||+|.++..++..+.+
T Consensus 177 pl~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 256 (384)
T 3ldg_A 177 PIKENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQ 256 (384)
T ss_dssp CCCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred CCcHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCC
Confidence 445666677777777677889999999999999888765432
Q ss_pred CeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEeccccc-cCC---ChHHHHHHHHHhccC
Q 019957 191 SGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAALH-CWP---SPSNAVAEISRILRS 266 (333)
Q Consensus 191 ~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~vl~-h~~---d~~~~l~~~~r~Lkp 266 (333)
.+++|+|+++.+++.|++++...|+ ...+.++++|+.+++.. .+||+|+++--.. .+. +...+.+++.+.||+
T Consensus 257 ~~v~GvDid~~al~~Ar~Na~~~gl--~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~ 333 (384)
T 3ldg_A 257 LDISGFDFDGRMVEIARKNAREVGL--EDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAP 333 (384)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTT
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCC--CCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhh
Confidence 4699999999999999999999885 55799999999998764 4899999974332 222 234566777777776
Q ss_pred --CcEEEEEEecc
Q 019957 267 --GGVFVGTTFLR 277 (333)
Q Consensus 267 --gG~l~i~~~~~ 277 (333)
||.+++.+...
T Consensus 334 ~~g~~~~iit~~~ 346 (384)
T 3ldg_A 334 LKTWSQFILTNDT 346 (384)
T ss_dssp CTTSEEEEEESCT
T ss_pred CCCcEEEEEECCH
Confidence 99999988643
No 256
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.15 E-value=1.6e-10 Score=107.37 Aligned_cols=126 Identities=14% Similarity=0.081 Sum_probs=97.6
Q ss_pred CCcHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCC--------------------------------------
Q 019957 149 PGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTY-------------------------------------- 190 (333)
Q Consensus 149 ~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~-------------------------------------- 190 (333)
|..+.....+.......++.+|||++||+|.++..++..+.+
T Consensus 178 pl~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 257 (385)
T 3ldu_A 178 PIRETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESK 257 (385)
T ss_dssp CCCHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCC
T ss_pred CCcHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCC
Confidence 445666677777777777889999999999999888776321
Q ss_pred CeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEeccccc-cC---CChHHHHHHHHHhccC
Q 019957 191 SGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAALH-CW---PSPSNAVAEISRILRS 266 (333)
Q Consensus 191 ~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~vl~-h~---~d~~~~l~~~~r~Lkp 266 (333)
.+|+|+|+++.+++.|++++..+|+ ...+.+.++|+.+++.+ .+||+|+++--.. .+ .+...+.+++.++||+
T Consensus 258 ~~V~GvDid~~ai~~Ar~Na~~~gl--~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~ 334 (385)
T 3ldu_A 258 FKIYGYDIDEESIDIARENAEIAGV--DEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRK 334 (385)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHHTC--GGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHT
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCC--CCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhh
Confidence 4799999999999999999998875 45799999999988754 5899999965432 12 2234567777778876
Q ss_pred --CcEEEEEEecc
Q 019957 267 --GGVFVGTTFLR 277 (333)
Q Consensus 267 --gG~l~i~~~~~ 277 (333)
|+.+++.+.+.
T Consensus 335 ~~g~~~~iit~~~ 347 (385)
T 3ldu_A 335 LKNWSYYLITSYE 347 (385)
T ss_dssp SBSCEEEEEESCT
T ss_pred CCCCEEEEEECCH
Confidence 99998888644
No 257
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.15 E-value=2.9e-10 Score=102.44 Aligned_cols=117 Identities=12% Similarity=0.077 Sum_probs=86.6
Q ss_pred HHHHhhcccCCCeEEEEcCCcCHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCC
Q 019957 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (333)
Q Consensus 157 ~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (333)
.+...+...++.+|||+|||+|..+..++.. +...+|+++|+++.+++.++++++..| ..++.++.+|+.+++...
T Consensus 93 l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g---~~~v~~~~~D~~~~~~~~ 169 (309)
T 2b9e_A 93 LPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAG---VSCCELAEEDFLAVSPSD 169 (309)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTT---CCSEEEEECCGGGSCTTC
T ss_pred HHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC---CCeEEEEeCChHhcCccc
Confidence 4445666778899999999999999999886 345699999999999999999999877 457999999998765322
Q ss_pred ---CCcceEEec------cccccCCC-----------h-------HHHHHHHHHhccCCcEEEEEEecc
Q 019957 236 ---GFVDAVHAG------AALHCWPS-----------P-------SNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 236 ---~~fD~V~~~------~vl~h~~d-----------~-------~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
.+||.|++. +++.+-+| . .++|+.+.++|+ ||+|+..|-..
T Consensus 170 ~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 170 PRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp GGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred cccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 579999962 33332112 1 235677777776 99999887554
No 258
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.09 E-value=4.2e-10 Score=98.62 Aligned_cols=86 Identities=12% Similarity=0.191 Sum_probs=71.6
Q ss_pred cHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC
Q 019957 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (333)
Q Consensus 151 ~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (333)
.....+.+.+.+...++.+|||||||+|.++..+++.+. +|+++|+++.+++.+++++.. ..++.++.+|+.+
T Consensus 14 d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~--~V~avEid~~~~~~~~~~~~~-----~~~v~~i~~D~~~ 86 (255)
T 3tqs_A 14 DSFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTECD--NLALVEIDRDLVAFLQKKYNQ-----QKNITIYQNDALQ 86 (255)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTSS--EEEEEECCHHHHHHHHHHHTT-----CTTEEEEESCTTT
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHhh-----CCCcEEEEcchHh
Confidence 345667788888878888999999999999999999864 999999999999999998765 4589999999999
Q ss_pred CCCCC----CCcceEEec
Q 019957 231 LPFAS----GFVDAVHAG 244 (333)
Q Consensus 231 lp~~~----~~fD~V~~~ 244 (333)
+++++ +.|| |+++
T Consensus 87 ~~~~~~~~~~~~~-vv~N 103 (255)
T 3tqs_A 87 FDFSSVKTDKPLR-VVGN 103 (255)
T ss_dssp CCGGGSCCSSCEE-EEEE
T ss_pred CCHHHhccCCCeE-EEec
Confidence 87643 4688 4443
No 259
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=99.02 E-value=3.2e-09 Score=97.76 Aligned_cols=148 Identities=14% Similarity=0.084 Sum_probs=98.3
Q ss_pred CCeEEEEcCCcCHHHHHHHHh-----------------CCCCeEEEEeCC-----------HHHHHHHHHHHHhcCcCCC
Q 019957 167 GGLLVDVSCGSGLFSRKFAKS-----------------GTYSGVVALDFS-----------ENMLRQCYDFIKQDNTILT 218 (333)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~-----------------~~~~~v~g~D~s-----------~~~~~~a~~~~~~~~~~~~ 218 (333)
.-+|+|+||++|.++..+... .|..+|+.-|+- +.+.+..++ ..|. .
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~---~~g~--~ 127 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEK---ENGR--K 127 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHH---HTCC--C
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhh---hccC--C
Confidence 467999999999998877654 245678899976 333332222 1110 1
Q ss_pred CCeEEEEccCCC---CCCCCCCcceEEeccccccCCChHH---------------------------------------H
Q 019957 219 SNLALVRADVCR---LPFASGFVDAVHAGAALHCWPSPSN---------------------------------------A 256 (333)
Q Consensus 219 ~~i~~~~~d~~~---lp~~~~~fD~V~~~~vl~h~~d~~~---------------------------------------~ 256 (333)
.+..|+.+.... -.|++++||+|+++.+||++.+... +
T Consensus 128 ~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~F 207 (384)
T 2efj_A 128 IGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTF 207 (384)
T ss_dssp TTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 234566655443 4578999999999999999865421 2
Q ss_pred HHHHHHhccCCcEEEEEEecccCC--Ccc---hhhHHHHH-------------hhhccCCCCCHHHHHHHHHhCC-CcEE
Q 019957 257 VAEISRILRSGGVFVGTTFLRYTS--STS---LTGRVLRE-------------RILQNYNYLTEEEIEDLCTSCG-LTNY 317 (333)
Q Consensus 257 l~~~~r~LkpgG~l~i~~~~~~~~--~~~---~~~~~~~~-------------~~~~~~~~~t~~~l~~ll~~aG-f~~v 317 (333)
|+..++.|+|||++++........ ... .+...|.. .....+++.+.+|++.++++.| |++.
T Consensus 208 L~~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~ 287 (384)
T 2efj_A 208 LRIHSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEIL 287 (384)
T ss_dssp HHHHHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEE
T ss_pred HHHHHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEE
Confidence 555589999999999999887643 111 22333321 1113577899999999999985 7776
Q ss_pred EE
Q 019957 318 TS 319 (333)
Q Consensus 318 ~~ 319 (333)
+.
T Consensus 288 ~l 289 (384)
T 2efj_A 288 YL 289 (384)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 260
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.02 E-value=6.3e-10 Score=102.98 Aligned_cols=111 Identities=15% Similarity=0.218 Sum_probs=83.0
Q ss_pred HHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-
Q 019957 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP- 232 (333)
Q Consensus 154 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp- 232 (333)
....+.+.+... +.+|||+|||+|.++..+++... +|+|+|+++.+++.|+++++.++ ..++.++.+|+.++.
T Consensus 202 l~~~~~~~~~~~-~~~vLDl~cG~G~~~l~la~~~~--~V~gvd~~~~ai~~a~~n~~~ng---~~~v~~~~~d~~~~~~ 275 (369)
T 3bt7_A 202 MLEWALDVTKGS-KGDLLELYCGNGNFSLALARNFD--RVLATEIAKPSVAAAQYNIAANH---IDNVQIIRMAAEEFTQ 275 (369)
T ss_dssp HHHHHHHHTTTC-CSEEEEESCTTSHHHHHHGGGSS--EEEEECCCHHHHHHHHHHHHHTT---CCSEEEECCCSHHHHH
T ss_pred HHHHHHHHhhcC-CCEEEEccCCCCHHHHHHHhcCC--EEEEEECCHHHHHHHHHHHHHcC---CCceEEEECCHHHHHH
Confidence 344555555443 56899999999999999988654 99999999999999999998877 458999999986642
Q ss_pred -CCC--------------CCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEec
Q 019957 233 -FAS--------------GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 233 -~~~--------------~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
+.. .+||+|++.--- ..+..++.+.|+++|.+++.+.+
T Consensus 276 ~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr------~g~~~~~~~~l~~~g~ivyvsc~ 328 (369)
T 3bt7_A 276 AMNGVREFNRLQGIDLKSYQCETIFVDPPR------SGLDSETEKMVQAYPRILYISCN 328 (369)
T ss_dssp HHSSCCCCTTGGGSCGGGCCEEEEEECCCT------TCCCHHHHHHHTTSSEEEEEESC
T ss_pred HHhhccccccccccccccCCCCEEEECcCc------cccHHHHHHHHhCCCEEEEEECC
Confidence 111 379999864211 12345677788899998887744
No 261
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=99.02 E-value=6.5e-09 Score=95.62 Aligned_cols=154 Identities=12% Similarity=0.103 Sum_probs=99.4
Q ss_pred CCeEEEEcCCcCHHHHHH--------HHhC-------CCCeEEEEeCCHHHHHHHHHHHHhcCc-------C--CCCCeE
Q 019957 167 GGLLVDVSCGSGLFSRKF--------AKSG-------TYSGVVALDFSENMLRQCYDFIKQDNT-------I--LTSNLA 222 (333)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l--------~~~~-------~~~~v~g~D~s~~~~~~a~~~~~~~~~-------~--~~~~i~ 222 (333)
..+|+|+|||+|.++..+ .+.+ |..+|+.-|+-.+.....-+.+....- . ...+-.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 468999999999988876 2221 567889999876554433333332100 0 000112
Q ss_pred EE---EccCCCCCCCCCCcceEEeccccccCCC--------------------------------------hHHHHHHHH
Q 019957 223 LV---RADVCRLPFASGFVDAVHAGAALHCWPS--------------------------------------PSNAVAEIS 261 (333)
Q Consensus 223 ~~---~~d~~~lp~~~~~fD~V~~~~vl~h~~d--------------------------------------~~~~l~~~~ 261 (333)
|+ -+.+..-.|++++||+|+++.+||++.+ ...+|+..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33 3344444578999999999999999873 234688889
Q ss_pred HhccCCcEEEEEEecccCCC-c----------chhhHHHHH-------------hhhccCCCCCHHHHHHHHH-hCCCcE
Q 019957 262 RILRSGGVFVGTTFLRYTSS-T----------SLTGRVLRE-------------RILQNYNYLTEEEIEDLCT-SCGLTN 316 (333)
Q Consensus 262 r~LkpgG~l~i~~~~~~~~~-~----------~~~~~~~~~-------------~~~~~~~~~t~~~l~~ll~-~aGf~~ 316 (333)
+.|+|||++++......... . ..+...|.. .....+++.+.+|++.+++ +.||++
T Consensus 213 ~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~I 292 (374)
T 3b5i_A 213 AEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAI 292 (374)
T ss_dssp HHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEEE
T ss_pred HHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCcEE
Confidence 99999999999998775321 0 111111211 0123567789999999998 599998
Q ss_pred EEEE
Q 019957 317 YTSK 320 (333)
Q Consensus 317 v~~~ 320 (333)
.+..
T Consensus 293 ~~le 296 (374)
T 3b5i_A 293 DKLV 296 (374)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7643
No 262
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.00 E-value=9e-10 Score=106.73 Aligned_cols=129 Identities=11% Similarity=0.015 Sum_probs=99.7
Q ss_pred CCCCCcHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCC------------------CCeEEEEeCCHHHHHHHH
Q 019957 146 SGFPGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT------------------YSGVVALDFSENMLRQCY 207 (333)
Q Consensus 146 ~~~~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~------------------~~~v~g~D~s~~~~~~a~ 207 (333)
..++.+....+.+.+.+.+.++.+|||.+||+|.++..+.+... ...++|+|+++.+++.|+
T Consensus 149 G~fyTP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~ 228 (541)
T 2ar0_A 149 GQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLAL 228 (541)
T ss_dssp -CCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHH
T ss_pred CeeeCCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHH
Confidence 44778888889999998887888999999999999887765410 137999999999999999
Q ss_pred HHHHhcCcCCCCC-----eEEEEccCCCCC-CCCCCcceEEeccccccCCC--------------hHHHHHHHHHhccCC
Q 019957 208 DFIKQDNTILTSN-----LALVRADVCRLP-FASGFVDAVHAGAALHCWPS--------------PSNAVAEISRILRSG 267 (333)
Q Consensus 208 ~~~~~~~~~~~~~-----i~~~~~d~~~lp-~~~~~fD~V~~~~vl~h~~d--------------~~~~l~~~~r~Lkpg 267 (333)
.++...+. .. ..+.++|....+ ...++||+|+++--+..... ...++..+.+.||||
T Consensus 229 ~nl~l~gi---~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~g 305 (541)
T 2ar0_A 229 MNCLLHDI---EGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPG 305 (541)
T ss_dssp HHHHTTTC---CCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEE
T ss_pred HHHHHhCC---CccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCC
Confidence 98876663 22 678889876543 34568999999754433221 236899999999999
Q ss_pred cEEEEEEecc
Q 019957 268 GVFVGTTFLR 277 (333)
Q Consensus 268 G~l~i~~~~~ 277 (333)
|++.+..+..
T Consensus 306 Gr~a~V~p~~ 315 (541)
T 2ar0_A 306 GRAAVVVPDN 315 (541)
T ss_dssp EEEEEEEEHH
T ss_pred CEEEEEecCc
Confidence 9999988754
No 263
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.00 E-value=9.6e-10 Score=101.79 Aligned_cols=102 Identities=16% Similarity=0.194 Sum_probs=82.8
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc---------------CcCCCCCeEEEEccCCC
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD---------------NTILTSNLALVRADVCR 230 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~---------------~~~~~~~i~~~~~d~~~ 230 (333)
++.+|||+|||+|.++..++...+..+|+++|+++.+++.++++++.+ ++ .++.++++|+..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl---~~i~v~~~Da~~ 123 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGE---KTIVINHDDANR 123 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESS---SEEEEEESCHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCC---CceEEEcCcHHH
Confidence 577999999999999999998855568999999999999999999887 53 349999999866
Q ss_pred CCC-CCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEE
Q 019957 231 LPF-ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 231 lp~-~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 274 (333)
+.. ..++||+|++.- ...+..+++.+.+.||+||.++++.
T Consensus 124 ~~~~~~~~fD~I~lDP----~~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 124 LMAERHRYFHFIDLDP----FGSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHHSTTCEEEEEECC----SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHhccCCCCEEEeCC----CCCHHHHHHHHHHhcCCCCEEEEEe
Confidence 431 135799999532 1234688999999999999887764
No 264
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.98 E-value=9.1e-10 Score=100.24 Aligned_cols=111 Identities=13% Similarity=0.123 Sum_probs=82.1
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcC---cC--CCCCeEEEEccCCCCCC----CCC
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDN---TI--LTSNLALVRADVCRLPF----ASG 236 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~---~~--~~~~i~~~~~d~~~lp~----~~~ 236 (333)
.+.+||+||||+|.++..+.+.++ .+|+++|+++.+++.|++++...+ +. ..++++++.+|+....- .++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 467999999999999999998874 789999999999999999875321 10 01379999999876431 357
Q ss_pred CcceEEecccc-ccCCCh-----HHHHHHH----HHhccCCcEEEEEEecc
Q 019957 237 FVDAVHAGAAL-HCWPSP-----SNAVAEI----SRILRSGGVFVGTTFLR 277 (333)
Q Consensus 237 ~fD~V~~~~vl-~h~~d~-----~~~l~~~----~r~LkpgG~l~i~~~~~ 277 (333)
+||+|++...- ..-..| ..+++.+ .++|+|||++++.....
T Consensus 267 ~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~ 317 (364)
T 2qfm_A 267 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCV 317 (364)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEET
T ss_pred CceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCc
Confidence 89999986432 111122 4566666 89999999999876443
No 265
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.96 E-value=2.3e-09 Score=94.61 Aligned_cols=87 Identities=16% Similarity=0.192 Sum_probs=72.3
Q ss_pred cHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC
Q 019957 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (333)
Q Consensus 151 ~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (333)
.....+.+.+.+...++ +|||||||+|.++..+++.+. +|+++|+++.+++.+++++. ..++.++.+|+.+
T Consensus 32 d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~~--~V~avEid~~~~~~l~~~~~------~~~v~vi~~D~l~ 102 (271)
T 3fut_A 32 SEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAGA--EVTAIEKDLRLRPVLEETLS------GLPVRLVFQDALL 102 (271)
T ss_dssp CHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTTC--CEEEEESCGGGHHHHHHHTT------TSSEEEEESCGGG
T ss_pred CHHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcCC--EEEEEECCHHHHHHHHHhcC------CCCEEEEECChhh
Confidence 34566778888887778 999999999999999999874 99999999999999998764 2479999999998
Q ss_pred CCCCCC-CcceEEeccc
Q 019957 231 LPFASG-FVDAVHAGAA 246 (333)
Q Consensus 231 lp~~~~-~fD~V~~~~v 246 (333)
+++++. .+|.|+++--
T Consensus 103 ~~~~~~~~~~~iv~NlP 119 (271)
T 3fut_A 103 YPWEEVPQGSLLVANLP 119 (271)
T ss_dssp SCGGGSCTTEEEEEEEC
T ss_pred CChhhccCccEEEecCc
Confidence 877542 6888887643
No 266
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.94 E-value=2.4e-09 Score=99.19 Aligned_cols=104 Identities=14% Similarity=0.138 Sum_probs=83.6
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHHHhcCcCCCCC-eEEEEccCCCCC--CCCCCcce
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTY-SGVVALDFSENMLRQCYDFIKQDNTILTSN-LALVRADVCRLP--FASGFVDA 240 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~-i~~~~~d~~~lp--~~~~~fD~ 240 (333)
.++.+|||++||+|.++..++....+ .+|+++|+++.+++.++++++.+++ ..+ +.++.+|+.++. ...++||+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl--~~~~v~v~~~Da~~~l~~~~~~~fD~ 128 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNI--PEDRYEIHGMEANFFLRKEWGFGFDY 128 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTC--CGGGEEEECSCHHHHHHSCCSSCEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCC--CCceEEEEeCCHHHHHHHhhCCCCcE
Confidence 45779999999999999999886422 5899999999999999999999884 334 999999985532 12457999
Q ss_pred EEeccccccCCChHHHHHHHHHhccCCcEEEEEE
Q 019957 241 VHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 241 V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 274 (333)
|++.- ...+..+++.+.+.|++||+|+++.
T Consensus 129 V~lDP----~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 129 VDLDP----FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEECC----SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECC----CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 99864 2334678999999999999887766
No 267
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.94 E-value=1.5e-09 Score=97.37 Aligned_cols=86 Identities=16% Similarity=0.289 Sum_probs=71.2
Q ss_pred HHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC--C
Q 019957 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--F 233 (333)
Q Consensus 156 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp--~ 233 (333)
+.+.+.+...++.+|||+|||+|.++..+++.++..+|+|+|+|+.+++.|++++...+ .++.++++|+.+++ +
T Consensus 16 ~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g----~~v~~v~~d~~~l~~~l 91 (301)
T 1m6y_A 16 REVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS----DRVSLFKVSYREADFLL 91 (301)
T ss_dssp HHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT----TTEEEEECCGGGHHHHH
T ss_pred HHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC----CcEEEEECCHHHHHHHH
Confidence 45556677777889999999999999999998766799999999999999999987653 58999999998875 1
Q ss_pred CC---CCcceEEecc
Q 019957 234 AS---GFVDAVHAGA 245 (333)
Q Consensus 234 ~~---~~fD~V~~~~ 245 (333)
.. .+||.|++..
T Consensus 92 ~~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 92 KTLGIEKVDGILMDL 106 (301)
T ss_dssp HHTTCSCEEEEEEEC
T ss_pred HhcCCCCCCEEEEcC
Confidence 11 5899999753
No 268
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.94 E-value=1.1e-09 Score=96.09 Aligned_cols=88 Identities=17% Similarity=0.145 Sum_probs=67.8
Q ss_pred HHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCH-------HHHHHHHHHHHhcCcCCCCCeEEEEccCCC
Q 019957 158 AQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSE-------NMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (333)
Q Consensus 158 ~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~-------~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (333)
+...+...++.+|||+|||+|.++..++..+. +|+|+|+++ .+++.++++.+.+++ ..++.++++|+.+
T Consensus 75 l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~g~--~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~--~~ri~~~~~d~~~ 150 (258)
T 2r6z_A 75 IAKAVNHTAHPTVWDATAGLGRDSFVLASLGL--TVTAFEQHPAVACLLSDGIRRALLNPETQDT--AARINLHFGNAAE 150 (258)
T ss_dssp HHHHTTGGGCCCEEETTCTTCHHHHHHHHTTC--CEEEEECCHHHHHHHHHHHHHHHHSHHHHHH--HTTEEEEESCHHH
T ss_pred HHHHhCcCCcCeEEEeeCccCHHHHHHHHhCC--EEEEEECChhhhHHHHHHHHHHHhHHHhhCC--ccCeEEEECCHHH
Confidence 33344445567999999999999999999754 999999999 999999887766553 3459999999977
Q ss_pred C-C-CCC--CCcceEEecccccc
Q 019957 231 L-P-FAS--GFVDAVHAGAALHC 249 (333)
Q Consensus 231 l-p-~~~--~~fD~V~~~~vl~h 249 (333)
+ + +++ ++||+|++.-.+.|
T Consensus 151 ~l~~~~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 151 QMPALVKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHHHHHHHHCCCSEEEECCCC--
T ss_pred HHHhhhccCCCccEEEECCCCCC
Confidence 4 3 334 68999999766655
No 269
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.90 E-value=7.8e-09 Score=103.11 Aligned_cols=127 Identities=15% Similarity=0.064 Sum_probs=93.1
Q ss_pred CCcHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhC----------------------------------------
Q 019957 149 PGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSG---------------------------------------- 188 (333)
Q Consensus 149 ~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~---------------------------------------- 188 (333)
|..+.....+.......++..|||.+||+|.++..++...
T Consensus 173 pl~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~ 252 (703)
T 3v97_A 173 PIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGL 252 (703)
T ss_dssp SSCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhcc
Confidence 4556666777777776677899999999999998877642
Q ss_pred --CCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC--CCCCCCcceEEeccccc-cCC---ChHHHHH--
Q 019957 189 --TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL--PFASGFVDAVHAGAALH-CWP---SPSNAVA-- 258 (333)
Q Consensus 189 --~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l--p~~~~~fD~V~~~~vl~-h~~---d~~~~l~-- 258 (333)
+...++|+|+++.+++.|++++...|+ ...+.+.++|+.++ |..+++||+|+++--.. .+. +...+.+
T Consensus 253 ~~~~~~i~G~Did~~av~~A~~N~~~agv--~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l 330 (703)
T 3v97_A 253 AEYSSHFYGSDSDARVIQRARTNARLAGI--GELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLL 330 (703)
T ss_dssp HHCCCCEEEEESCHHHHHHHHHHHHHTTC--GGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHH
T ss_pred ccCCccEEEEECCHHHHHHHHHHHHHcCC--CCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHH
Confidence 124799999999999999999999885 45699999999887 33344899999973322 122 1233344
Q ss_pred -HHHHhccCCcEEEEEEecc
Q 019957 259 -EISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 259 -~~~r~LkpgG~l~i~~~~~ 277 (333)
++.+.+.|||.+++.+.+.
T Consensus 331 ~~~lk~~~~g~~~~ilt~~~ 350 (703)
T 3v97_A 331 GRIMKNQFGGWNLSLFSASP 350 (703)
T ss_dssp HHHHHHHCTTCEEEEEESCH
T ss_pred HHHHHhhCCCCeEEEEeCCH
Confidence 4444555899999988654
No 270
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.88 E-value=4.5e-08 Score=94.54 Aligned_cols=148 Identities=16% Similarity=0.033 Sum_probs=110.8
Q ss_pred cchhHHHHhhHHhhcc-----cCCCCCcHHHHHHHHHhhc----ccCCCeEEEEcCCcCHHHHHHHHhC---CCCeEEEE
Q 019957 129 PFVSFLYERGWRQNFN-----RSGFPGPDEEFKMAQEYFK----SAQGGLLVDVSCGSGLFSRKFAKSG---TYSGVVAL 196 (333)
Q Consensus 129 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~----~~~~~~vLDiGcG~G~~~~~l~~~~---~~~~v~g~ 196 (333)
+.++..|+...++... .+.++.+....+.+.+.+. +.++.+|||.+||+|.++..+.+.. ....++|+
T Consensus 175 D~lG~~YE~ll~~~a~~~~k~~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~ 254 (542)
T 3lkd_A 175 DMLGDAYEYLIGQFATDSGKKAGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQ 254 (542)
T ss_dssp THHHHHHHHHHHHHHCC---CCSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEE
T ss_pred hHHHHHHHHHHHHHHHHhcccCCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEE
Confidence 5566677776654332 3457889999999998887 4567899999999999988887763 24589999
Q ss_pred eCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC--C-CCCCCcceEEeccccc--c-----------------CC---
Q 019957 197 DFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL--P-FASGFVDAVHAGAALH--C-----------------WP--- 251 (333)
Q Consensus 197 D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l--p-~~~~~fD~V~~~~vl~--h-----------------~~--- 251 (333)
|+++.+++.|+.++...|+. ..++.+.++|.... | ....+||+|+++--+. . ++
T Consensus 255 Eid~~~~~lA~~Nl~l~gi~-~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s 333 (542)
T 3lkd_A 255 ELNTSTYNLARMNMILHGVP-IENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKS 333 (542)
T ss_dssp ESCHHHHHHHHHHHHHTTCC-GGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTT
T ss_pred ECcHHHHHHHHHHHHHcCCC-cCccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCc
Confidence 99999999999988776631 14678999998765 4 4567899999852111 0 10
Q ss_pred C-hHHHHHHHHHhcc-CCcEEEEEEecc
Q 019957 252 S-PSNAVAEISRILR-SGGVFVGTTFLR 277 (333)
Q Consensus 252 d-~~~~l~~~~r~Lk-pgG~l~i~~~~~ 277 (333)
+ ...++..+.+.|| +||++.+..+..
T Consensus 334 ~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g 361 (542)
T 3lkd_A 334 KADFAFLLHGYYHLKQDNGVMAIVLPHG 361 (542)
T ss_dssp CCHHHHHHHHHHTBCTTTCEEEEEEETH
T ss_pred hhhHHHHHHHHHHhCCCceeEEEEecch
Confidence 1 1247999999999 999999988764
No 271
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.87 E-value=9.5e-09 Score=99.45 Aligned_cols=146 Identities=14% Similarity=0.029 Sum_probs=106.4
Q ss_pred cchhHHHHhhHHhhc-----ccCCCCCcHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCC--------------
Q 019957 129 PFVSFLYERGWRQNF-----NRSGFPGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-------------- 189 (333)
Q Consensus 129 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-------------- 189 (333)
+.++..|+...++.. ....++.+...++.+.+.+.+.++ +|||.+||+|.++..+.+...
T Consensus 203 D~lG~~yE~ll~~~a~~~~k~~G~fyTP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~ 281 (544)
T 3khk_A 203 DILGHVYEYFLGQFALAEGKQGGQYYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQK 281 (544)
T ss_dssp CSHHHHHHHHHHHHHHTTTCCSTTTCCCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHG
T ss_pred hHHHHHHHHHHHHHHHhhCccCCeEeCCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHh
Confidence 556667776655432 234578999999999999987655 999999999999887654210
Q ss_pred -CCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-CCCCCcceEEecccccc------------------
Q 019957 190 -YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-FASGFVDAVHAGAALHC------------------ 249 (333)
Q Consensus 190 -~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-~~~~~fD~V~~~~vl~h------------------ 249 (333)
...++|+|+++.+++.|+.++...|+ ..++.+.++|....+ +.+.+||+|+++--+..
T Consensus 282 ~~~~i~G~Eid~~~~~lA~~Nl~l~gi--~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~ 359 (544)
T 3khk_A 282 KQISVYGQESNPTTWKLAAMNMVIRGI--DFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINT 359 (544)
T ss_dssp GGEEEEECCCCHHHHHHHHHHHHHTTC--CCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECC
T ss_pred hhceEEEEeCCHHHHHHHHHHHHHhCC--CcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCc
Confidence 34799999999999999998877764 334444778865544 45678999999533221
Q ss_pred -------CC---C-hHHHHHHHHHhccCCcEEEEEEecc
Q 019957 250 -------WP---S-PSNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 250 -------~~---d-~~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
++ + ...++..+.+.|||||++.+..|+.
T Consensus 360 ~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g 398 (544)
T 3khk_A 360 NGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANG 398 (544)
T ss_dssp C--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETH
T ss_pred ccccccccCCCcchhHHHHHHHHHHhccCceEEEEecch
Confidence 11 0 1268999999999999999988754
No 272
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.82 E-value=2.3e-07 Score=82.15 Aligned_cols=112 Identities=15% Similarity=0.247 Sum_probs=86.3
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc--CcCCCCCeEEEEccCCCC-CCCCCCcceEE
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTILTSNLALVRADVCRL-PFASGFVDAVH 242 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~--~~~~~~~i~~~~~d~~~l-p~~~~~fD~V~ 242 (333)
.+.+||-||.|.|..++.+.+..+..+++.+|+++.+++.+++.+... +....++++++.+|.... .-..++||+|+
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi 162 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEE
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEE
Confidence 467999999999999999998866679999999999999999987531 211257999999999764 34467899999
Q ss_pred eccccccCC----ChHHHHHHHHHhccCCcEEEEEEecc
Q 019957 243 AGAALHCWP----SPSNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 243 ~~~vl~h~~----d~~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
....=..-+ -...+++.+++.|+|||+++......
T Consensus 163 ~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp 201 (294)
T 3o4f_A 163 SDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVC 201 (294)
T ss_dssp ESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEES
T ss_pred EeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCc
Confidence 743211100 11478999999999999999876543
No 273
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.81 E-value=1.2e-08 Score=99.47 Aligned_cols=100 Identities=13% Similarity=0.121 Sum_probs=73.9
Q ss_pred CCeEEEEcCCcCHHHHHHHHh---C-CCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEE
Q 019957 167 GGLLVDVSCGSGLFSRKFAKS---G-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVH 242 (333)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~---~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~ 242 (333)
...|||||||+|-++....++ + ...+|+++|.|+ +...+++..+.++. ...|+++.+|++++..+ +++|+|+
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~--~dkVtVI~gd~eev~LP-EKVDIIV 433 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEW--GSQVTVVSSDMREWVAP-EKADIIV 433 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTT--GGGEEEEESCTTTCCCS-SCEEEEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccC--CCeEEEEeCcceeccCC-cccCEEE
Confidence 357999999999885444433 2 223689999997 56678888888875 78899999999998654 6899999
Q ss_pred ec---cccccCCChHHHHHHHHHhccCCcEEE
Q 019957 243 AG---AALHCWPSPSNAVAEISRILRSGGVFV 271 (333)
Q Consensus 243 ~~---~vl~h~~d~~~~l~~~~r~LkpgG~l~ 271 (333)
+- ..+-+-.-+ ..|....|.|||||+++
T Consensus 434 SEwMG~fLl~E~ml-evL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 434 SELLGSFADNELSP-ECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCCCBTTBGGGCHH-HHHHHHGGGEEEEEEEE
T ss_pred EEcCcccccccCCH-HHHHHHHHhcCCCcEEc
Confidence 72 222221223 67888899999999864
No 274
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.81 E-value=1.8e-08 Score=88.00 Aligned_cols=76 Identities=17% Similarity=0.388 Sum_probs=64.0
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC
Q 019957 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (333)
Q Consensus 152 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (333)
....+.+.+.+...++.+|||||||+|.++..+++.+ ..+++|+|+++.+++.++++ . ..++.++.+|+..+
T Consensus 17 ~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~-~~~v~avEid~~~~~~~~~~--~-----~~~v~~i~~D~~~~ 88 (249)
T 3ftd_A 17 EGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHP-LKKLYVIELDREMVENLKSI--G-----DERLEVINEDASKF 88 (249)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSC-CSEEEEECCCHHHHHHHTTS--C-----CTTEEEECSCTTTC
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcC-CCeEEEEECCHHHHHHHHhc--c-----CCCeEEEEcchhhC
Confidence 4456777777777778899999999999999999884 35999999999999999875 2 45899999999998
Q ss_pred CCCC
Q 019957 232 PFAS 235 (333)
Q Consensus 232 p~~~ 235 (333)
++++
T Consensus 89 ~~~~ 92 (249)
T 3ftd_A 89 PFCS 92 (249)
T ss_dssp CGGG
T ss_pred ChhH
Confidence 8764
No 275
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.79 E-value=1.8e-08 Score=89.26 Aligned_cols=78 Identities=14% Similarity=0.197 Sum_probs=64.1
Q ss_pred cHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCC--CeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccC
Q 019957 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTY--SGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV 228 (333)
Q Consensus 151 ~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~--~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~ 228 (333)
.....+.+.+.+...++.+|||||||+|.++..+++.+.. .+|+|+|+++.+++.++++. ..++.++.+|+
T Consensus 27 d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-------~~~v~~i~~D~ 99 (279)
T 3uzu_A 27 DHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-------GELLELHAGDA 99 (279)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-------GGGEEEEESCG
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-------CCCcEEEECCh
Confidence 3445677777887778889999999999999999998651 23999999999999999873 23799999999
Q ss_pred CCCCCCC
Q 019957 229 CRLPFAS 235 (333)
Q Consensus 229 ~~lp~~~ 235 (333)
.++++++
T Consensus 100 ~~~~~~~ 106 (279)
T 3uzu_A 100 LTFDFGS 106 (279)
T ss_dssp GGCCGGG
T ss_pred hcCChhH
Confidence 9987653
No 276
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.79 E-value=9.6e-09 Score=89.96 Aligned_cols=128 Identities=16% Similarity=0.080 Sum_probs=85.5
Q ss_pred CCCeEEEEcCCcCHHHHHHHHh-------CCC-----CeEEEEeCCH---HHHH-----------HHHHHHHhcC-----
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKS-------GTY-----SGVVALDFSE---NMLR-----------QCYDFIKQDN----- 214 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~-------~~~-----~~v~g~D~s~---~~~~-----------~a~~~~~~~~----- 214 (333)
+..+|||||+|+|+.+..+.+. .|. ..++++|..+ +.+. .+++.+....
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4568999999999988776543 453 4899999876 4444 4555544310
Q ss_pred -----cC-CCCCeEEEEccCCC-CCCCC----CCcceEEecc-ccccCCC--hHHHHHHHHHhccCCcEEEEEEecccCC
Q 019957 215 -----TI-LTSNLALVRADVCR-LPFAS----GFVDAVHAGA-ALHCWPS--PSNAVAEISRILRSGGVFVGTTFLRYTS 280 (333)
Q Consensus 215 -----~~-~~~~i~~~~~d~~~-lp~~~----~~fD~V~~~~-vl~h~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~~ 280 (333)
+. ...+++++.+|+.+ ++..+ ..||+|+... .-..-++ ...+++.+.++|||||+|+..+ .
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tys--a--- 214 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT--S--- 214 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESC--C---
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEe--C---
Confidence 00 02467899999865 44222 2799999853 1111122 2578999999999999988522 1
Q ss_pred CcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCCcEEEE
Q 019957 281 STSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTS 319 (333)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf~~v~~ 319 (333)
...+++.|.++||++.+.
T Consensus 215 ---------------------a~~vrr~L~~aGF~v~~~ 232 (257)
T 2qy6_A 215 ---------------------AGFVRRGLQEAGFTMQKR 232 (257)
T ss_dssp ---------------------BHHHHHHHHHHTEEEEEE
T ss_pred ---------------------CHHHHHHHHHCCCEEEeC
Confidence 135778899999997764
No 277
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.78 E-value=1.5e-08 Score=92.51 Aligned_cols=150 Identities=13% Similarity=0.099 Sum_probs=101.8
Q ss_pred CCeEEEEcCCcCHHHHHHHHh----------------CCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEc---c
Q 019957 167 GGLLVDVSCGSGLFSRKFAKS----------------GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRA---D 227 (333)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~----------------~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~---d 227 (333)
.-+|+|+||++|.++..+... .|..+|+.-|+-.+.....-+.+..... ..+..|+.+ .
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~--~~~~~f~~gvpgS 129 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEND--VDGVCFINGVPGS 129 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCS--CTTCEEEEEEESC
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcc--cCCCEEEEecchh
Confidence 357999999999876644332 3456899999988777766665432110 112344444 4
Q ss_pred CCCCCCCCCCcceEEeccccccCCChH---------------------------------HHHHHHHHhccCCcEEEEEE
Q 019957 228 VCRLPFASGFVDAVHAGAALHCWPSPS---------------------------------NAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 228 ~~~lp~~~~~fD~V~~~~vl~h~~d~~---------------------------------~~l~~~~r~LkpgG~l~i~~ 274 (333)
+..-.|+++++|+|+++.+||++.+.. .+|+..++.|+|||++++..
T Consensus 130 Fy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 444568899999999999999986522 34888899999999999999
Q ss_pred ecccCCC---------cchhhHHHHH-------------hhhccCCCCCHHHHHHHHHhCCC-cEEE
Q 019957 275 FLRYTSS---------TSLTGRVLRE-------------RILQNYNYLTEEEIEDLCTSCGL-TNYT 318 (333)
Q Consensus 275 ~~~~~~~---------~~~~~~~~~~-------------~~~~~~~~~t~~~l~~ll~~aGf-~~v~ 318 (333)
..+.... ...+...|.. .....+++.+.+|++.++++.|. ++..
T Consensus 210 ~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~ 276 (359)
T 1m6e_X 210 LGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDH 276 (359)
T ss_dssp EECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEE
T ss_pred ecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEE
Confidence 8775321 1122333321 11245678899999999999965 6554
No 278
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.78 E-value=2.4e-07 Score=77.76 Aligned_cols=111 Identities=9% Similarity=0.059 Sum_probs=80.0
Q ss_pred HHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC--
Q 019957 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-- 231 (333)
Q Consensus 154 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-- 231 (333)
..+++...+. +..+|||||| |+.+..+++. ++.+|+.+|.++...+.++++++..|+....++.++.+|+.+.
T Consensus 20 ~~~~L~~~l~--~a~~VLEiGt--GySTl~lA~~-~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~ 94 (202)
T 3cvo_A 20 EAEALRMAYE--EAEVILEYGS--GGSTVVAAEL-PGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGD 94 (202)
T ss_dssp HHHHHHHHHH--HCSEEEEESC--SHHHHHHHTS-TTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCG
T ss_pred HHHHHHHHhh--CCCEEEEECc--hHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhc
Confidence 3444444333 4679999998 4677777764 2569999999999999999999987631134799999997542
Q ss_pred -------------C--------C-CCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEE
Q 019957 232 -------------P--------F-ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 232 -------------p--------~-~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 274 (333)
+ . ..++||+|+...- .....+..+.+.|+|||++++-.
T Consensus 95 wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~-----k~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 95 WGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGR-----FRVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp GGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSS-----SHHHHHHHHHHHCSSCEEEEETT
T ss_pred ccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCC-----CchhHHHHHHHhcCCCeEEEEeC
Confidence 2 1 2368999998763 22355667789999999996644
No 279
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.74 E-value=7e-09 Score=90.65 Aligned_cols=87 Identities=9% Similarity=0.134 Sum_probs=65.2
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC
Q 019957 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (333)
Q Consensus 152 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (333)
....+.+.+.+...++.+|||||||+|.++. +.+ +...+|+++|+++.+++.+++++.. .+++.++.+|+..+
T Consensus 7 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~~-----~~~v~~i~~D~~~~ 79 (252)
T 1qyr_A 7 QFVIDSIVSAINPQKGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPFL-----GPKLTIYQQDAMTF 79 (252)
T ss_dssp HHHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTTT-----GGGEEEECSCGGGC
T ss_pred HHHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhcc-----CCceEEEECchhhC
Confidence 3455677777777778899999999999999 654 4422399999999999999986543 24799999999988
Q ss_pred CCCC-----CCcceEEecc
Q 019957 232 PFAS-----GFVDAVHAGA 245 (333)
Q Consensus 232 p~~~-----~~fD~V~~~~ 245 (333)
++++ +..|.|+++-
T Consensus 80 ~~~~~~~~~~~~~~vvsNl 98 (252)
T 1qyr_A 80 NFGELAEKMGQPLRVFGNL 98 (252)
T ss_dssp CHHHHHHHHTSCEEEEEEC
T ss_pred CHHHhhcccCCceEEEECC
Confidence 7543 1235666553
No 280
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.69 E-value=3.3e-08 Score=86.01 Aligned_cols=110 Identities=14% Similarity=0.146 Sum_probs=74.1
Q ss_pred hcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceE
Q 019957 162 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 241 (333)
Q Consensus 162 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V 241 (333)
....++.+|||+|||+|.++..+++..+...++|+|+..++...... .... ..++..+..+++...+.+++||+|
T Consensus 70 ~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~-~~~~----g~~ii~~~~~~dv~~l~~~~~DlV 144 (277)
T 3evf_A 70 GYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMN-VQSL----GWNIITFKDKTDIHRLEPVKCDTL 144 (277)
T ss_dssp TSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCC-CCBT----TGGGEEEECSCCTTTSCCCCCSEE
T ss_pred CCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccc-cCcC----CCCeEEEeccceehhcCCCCccEE
Confidence 33456779999999999999998876444578888887442100000 0000 114556677766566678899999
Q ss_pred EeccccccCCCh----H---HHHHHHHHhccCC-cEEEEEEecc
Q 019957 242 HAGAALHCWPSP----S---NAVAEISRILRSG-GVFVGTTFLR 277 (333)
Q Consensus 242 ~~~~vl~h~~d~----~---~~l~~~~r~Lkpg-G~l~i~~~~~ 277 (333)
++..+.+ .... . .+|+.+.++|+|| |.|++-.+..
T Consensus 145 lsD~apn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~p 187 (277)
T 3evf_A 145 LCDIGES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAP 187 (277)
T ss_dssp EECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred EecCccC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCC
Confidence 9977555 3322 1 3468889999999 9999977663
No 281
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.66 E-value=1.8e-08 Score=93.70 Aligned_cols=74 Identities=12% Similarity=0.159 Sum_probs=63.1
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc--CcCCCCCeEEEEccCCCC-CC-CCCCcceE
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTILTSNLALVRADVCRL-PF-ASGFVDAV 241 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~--~~~~~~~i~~~~~d~~~l-p~-~~~~fD~V 241 (333)
++.+|||+|||+|..+..+++.+. +|+++|+|+.+++.|+++++.. | ..++.++++|+.+. +. .+++||+|
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g~--~V~~VD~s~~~l~~Ar~N~~~~~~g---l~~i~~i~~Da~~~L~~~~~~~fDvV 167 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKAS--QGIYIERNDETAVAARHNIPLLLNE---GKDVNILTGDFKEYLPLIKTFHPDYI 167 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHSCT---TCEEEEEESCGGGSHHHHHHHCCSEE
T ss_pred CCCEEEEeCCCchHHHHHHHhcCC--EEEEEECCHHHHHHHHHhHHHhccC---CCcEEEEECcHHHhhhhccCCCceEE
Confidence 378999999999999999988764 9999999999999999999876 5 36799999999874 32 24589999
Q ss_pred Eec
Q 019957 242 HAG 244 (333)
Q Consensus 242 ~~~ 244 (333)
++.
T Consensus 168 ~lD 170 (410)
T 3ll7_A 168 YVD 170 (410)
T ss_dssp EEC
T ss_pred EEC
Confidence 984
No 282
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.65 E-value=8e-08 Score=93.78 Aligned_cols=101 Identities=10% Similarity=0.095 Sum_probs=71.9
Q ss_pred CCeEEEEcCCcCHHHHHHHH----hC---------CCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCC
Q 019957 167 GGLLVDVSCGSGLFSRKFAK----SG---------TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (333)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~----~~---------~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~ 233 (333)
+..|||||||+|-++..... .+ ...+|+++|.++.+....+.+.. +++ ...|+++.+|++++..
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~--~d~VtVI~gd~eev~l 486 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTW--KRRVTIIESDMRSLPG 486 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTT--TTCSEEEESCGGGHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCC--CCeEEEEeCchhhccc
Confidence 45799999999999643222 22 23489999999977766665544 553 6779999999998765
Q ss_pred C-----CCCcceEEeccccccCC---ChHHHHHHHHHhccCCcEEE
Q 019957 234 A-----SGFVDAVHAGAALHCWP---SPSNAVAEISRILRSGGVFV 271 (333)
Q Consensus 234 ~-----~~~fD~V~~~~vl~h~~---d~~~~l~~~~r~LkpgG~l~ 271 (333)
+ .+++|+|++-.. ..+. -....|..+.+.|||||+++
T Consensus 487 p~~~~~~ekVDIIVSElm-Gsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 487 IAKDRGFEQPDIIVSELL-GSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHHTTCCCCSEEEECCC-BTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccccCCCCcccEEEEecc-ccccchhccHHHHHHHHHhCCCCcEEE
Confidence 3 578999998432 1111 12357888889999999865
No 283
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.64 E-value=3.1e-08 Score=86.64 Aligned_cols=110 Identities=16% Similarity=0.037 Sum_probs=72.4
Q ss_pred HHHHHhhcccCC--CeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcC--cC-C---CCCeEEEEcc
Q 019957 156 KMAQEYFKSAQG--GLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDN--TI-L---TSNLALVRAD 227 (333)
Q Consensus 156 ~~~~~~l~~~~~--~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~--~~-~---~~~i~~~~~d 227 (333)
+.+.+.+...++ .+|||+|||+|..+..++..+. +|+++|+++.+.+.+++.++... .. . ..+++++.+|
T Consensus 76 e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~g~--~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D 153 (258)
T 2oyr_A 76 EAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGC--RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHAS 153 (258)
T ss_dssp SHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHHTC--CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESC
T ss_pred HHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECC
Confidence 344455555556 7999999999999999999865 89999999987766666543221 00 0 1468999999
Q ss_pred CCC-CCCCCCCcceEEeccccccCCChHHHHHHHHHhccCCc
Q 019957 228 VCR-LPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGG 268 (333)
Q Consensus 228 ~~~-lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG 268 (333)
..+ ++...++||+|++.-.+.+-. ....+++..++|++.+
T Consensus 154 ~~~~L~~~~~~fDvV~lDP~y~~~~-~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 154 SLTALTDITPRPQVVYLDPMFPHKQ-KSALVKKEMRVFQSLV 194 (258)
T ss_dssp HHHHSTTCSSCCSEEEECCCCCCCC-C-----HHHHHHHHHS
T ss_pred HHHHHHhCcccCCEEEEcCCCCCcc-cchHHHHHHHHHHHhh
Confidence 876 332234799999987766532 2244555556665544
No 284
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.57 E-value=5.7e-07 Score=89.17 Aligned_cols=132 Identities=14% Similarity=0.093 Sum_probs=90.0
Q ss_pred CCCCCcHHHHHHHHHh----hcc--cCCCeEEEEcCCcCHHHHHHHHhCC---CCeEEEEeCCHHHHHHH--HHHHHhcC
Q 019957 146 SGFPGPDEEFKMAQEY----FKS--AQGGLLVDVSCGSGLFSRKFAKSGT---YSGVVALDFSENMLRQC--YDFIKQDN 214 (333)
Q Consensus 146 ~~~~~~~~~~~~~~~~----l~~--~~~~~vLDiGcG~G~~~~~l~~~~~---~~~v~g~D~s~~~~~~a--~~~~~~~~ 214 (333)
+.++.+......+... +.. .++.+|||.|||+|.++..+++..+ ..+++|+|+++.+++.| +.++..++
T Consensus 295 GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~ 374 (878)
T 3s1s_A 295 GVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQ 374 (878)
T ss_dssp BSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTT
T ss_pred ceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhh
Confidence 4577888888887776 322 2467999999999999999988753 35799999999999999 44333211
Q ss_pred cC-CCCCeEEEEccCCCC-CCCCCCcceEEecccccc-CC---------------------------C-hHHHHHHHHHh
Q 019957 215 TI-LTSNLALVRADVCRL-PFASGFVDAVHAGAALHC-WP---------------------------S-PSNAVAEISRI 263 (333)
Q Consensus 215 ~~-~~~~i~~~~~d~~~l-p~~~~~fD~V~~~~vl~h-~~---------------------------d-~~~~l~~~~r~ 263 (333)
+. ......+...|+... +...++||+|+++=-.-. .. + ...++..+.+.
T Consensus 375 LlhGi~~~~I~~dD~L~~~~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~l 454 (878)
T 3s1s_A 375 LVSSNNAPTITGEDVCSLNPEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTEL 454 (878)
T ss_dssp TCBTTBCCEEECCCGGGCCGGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHH
T ss_pred hhcCCCcceEEecchhcccccccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHh
Confidence 10 012234555565543 234578999999543311 11 1 12467889999
Q ss_pred ccCCcEEEEEEecc
Q 019957 264 LRSGGVFVGTTFLR 277 (333)
Q Consensus 264 LkpgG~l~i~~~~~ 277 (333)
|++||++.+..|..
T Consensus 455 LKpGGrLAfIlP~s 468 (878)
T 3s1s_A 455 VQDGTVISAIMPKQ 468 (878)
T ss_dssp SCTTCEEEEEEETH
T ss_pred cCCCcEEEEEEChH
Confidence 99999999999865
No 285
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.50 E-value=7.6e-07 Score=81.42 Aligned_cols=134 Identities=11% Similarity=0.028 Sum_probs=98.2
Q ss_pred HHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcC---CCCCeEEEEccCCCCC
Q 019957 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI---LTSNLALVRADVCRLP 232 (333)
Q Consensus 156 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~---~~~~i~~~~~d~~~lp 232 (333)
.+....+.+.++.+|||+.+|.|.=+..++..+....++++|+++..++..+++++..+.. ...++.+...|...++
T Consensus 138 ~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~ 217 (359)
T 4fzv_A 138 LLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWG 217 (359)
T ss_dssp HHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHH
T ss_pred HHHHHHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcc
Confidence 3445567788899999999999999999988876668999999999999999988876531 1247888888887654
Q ss_pred -CCCCCcceEEe----cc----ccccCCCh----------------HHHHHHHHHhccCCcEEEEEEecccCCCcchhhH
Q 019957 233 -FASGFVDAVHA----GA----ALHCWPSP----------------SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGR 287 (333)
Q Consensus 233 -~~~~~fD~V~~----~~----vl~h~~d~----------------~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~ 287 (333)
...+.||.|++ ++ ++..-++. .++|..+.+.|||||+|+.+|-......+.....
T Consensus 218 ~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV~ 297 (359)
T 4fzv_A 218 ELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQ 297 (359)
T ss_dssp HHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHHHHH
T ss_pred hhccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHHHHH
Confidence 34578999995 32 22211111 2578888899999999999997765444444333
Q ss_pred HH
Q 019957 288 VL 289 (333)
Q Consensus 288 ~~ 289 (333)
.+
T Consensus 298 ~~ 299 (359)
T 4fzv_A 298 GA 299 (359)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 286
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.43 E-value=1.2e-07 Score=82.57 Aligned_cols=109 Identities=17% Similarity=0.092 Sum_probs=71.8
Q ss_pred cccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEE
Q 019957 163 KSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVH 242 (333)
Q Consensus 163 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~ 242 (333)
...++.+|||+|||+|.++..+++..+...++|+|+...+...+... ... ..++.....+.....+..+++|+|+
T Consensus 87 ~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~~----g~~ii~~~~~~dv~~l~~~~~DvVL 161 (282)
T 3gcz_A 87 YVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TTL----GWNLIRFKDKTDVFNMEVIPGDTLL 161 (282)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBT----TGGGEEEECSCCGGGSCCCCCSEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-ccC----CCceEEeeCCcchhhcCCCCcCEEE
Confidence 44567799999999999999988765556799999976532111100 000 1233344433333334578999999
Q ss_pred eccccccCCCh-------HHHHHHHHHhccCC--cEEEEEEecc
Q 019957 243 AGAALHCWPSP-------SNAVAEISRILRSG--GVFVGTTFLR 277 (333)
Q Consensus 243 ~~~vl~h~~d~-------~~~l~~~~r~Lkpg--G~l~i~~~~~ 277 (333)
|..... .... ..+|+-+.++|+|| |.|++-.+..
T Consensus 162 SDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~p 204 (282)
T 3gcz_A 162 CDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCP 204 (282)
T ss_dssp ECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCC
T ss_pred ecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecC
Confidence 987765 4332 13567778999999 9999988763
No 287
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.42 E-value=5.8e-06 Score=75.24 Aligned_cols=122 Identities=16% Similarity=0.174 Sum_probs=84.5
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEec
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~ 244 (333)
.++.++||+||++|.++..+.+++. .|+++|+.+ +...... .+++.++++|+.......+.||+|+|.
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~rg~--~V~aVD~~~-l~~~l~~---------~~~V~~~~~d~~~~~~~~~~~D~vvsD 277 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKRNM--WVYSVDNGP-MAQSLMD---------TGQVTWLREDGFKFRPTRSNISWMVCD 277 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC--EEEEECSSC-CCHHHHT---------TTCEEEECSCTTTCCCCSSCEEEEEEC
T ss_pred CCCCEEEEeCcCCCHHHHHHHHCCC--EEEEEEhhh-cChhhcc---------CCCeEEEeCccccccCCCCCcCEEEEc
Confidence 4688999999999999999999865 999999864 2122221 678999999998877667789999997
Q ss_pred cccccCCChHHHHHHHHHhccCC---cEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCCcE
Q 019957 245 AALHCWPSPSNAVAEISRILRSG---GVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTN 316 (333)
Q Consensus 245 ~vl~h~~d~~~~l~~~~r~Lkpg---G~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf~~ 316 (333)
.+ .+|...+..+.++|..| +.++..-.... .. ...+.. ....+...++..||..
T Consensus 278 m~----~~p~~~~~l~~~wl~~~~~~~aI~~lKL~mk----~~-~~~l~~---------~~~~i~~~l~~~g~~~ 334 (375)
T 4auk_A 278 MV----EKPAKVAALMAQWLVNGWCRETIFNLKLPMK----KR-YEEVSH---------NLAYIQAQLDEHGINA 334 (375)
T ss_dssp CS----SCHHHHHHHHHHHHHTTSCSEEEEEEECCSS----SH-HHHHHH---------HHHHHHHHHHHTTCCE
T ss_pred CC----CChHHhHHHHHHHHhccccceEEEEEEeccc----ch-HHHHHH---------HHHHHHHHHHhcCcch
Confidence 65 45777778887877765 33332221111 00 111111 1246778899999964
No 288
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.38 E-value=1.1e-06 Score=77.54 Aligned_cols=130 Identities=9% Similarity=0.103 Sum_probs=91.8
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhC-----CCCeEEEEeCCHH--------------------------HHHHHHHHHHhc
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSG-----TYSGVVALDFSEN--------------------------MLRQCYDFIKQD 213 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~-----~~~~v~g~D~s~~--------------------------~~~~a~~~~~~~ 213 (333)
..++.|||+|+..|..+..++... ++.+++++|..+. .++.++++++..
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 446799999999999888776542 3568999996321 366788888887
Q ss_pred CcCCCCCeEEEEccCCC-CC-CCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHH
Q 019957 214 NTILTSNLALVRADVCR-LP-FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRE 291 (333)
Q Consensus 214 ~~~~~~~i~~~~~d~~~-lp-~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~ 291 (333)
|+. ..++.++.+|+.+ +| +..++||+|+.-.-. ...-...|+.+...|+|||++++-+.. + +..
T Consensus 185 gl~-~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~--y~~~~~~Le~~~p~L~pGGiIv~DD~~-------~----~~G 250 (282)
T 2wk1_A 185 DLL-DEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL--YESTWDTLTNLYPKVSVGGYVIVDDYM-------M----CPP 250 (282)
T ss_dssp TCC-STTEEEEESCHHHHSTTCCCCCEEEEEECCCS--HHHHHHHHHHHGGGEEEEEEEEESSCT-------T----CHH
T ss_pred CCC-cCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc--cccHHHHHHHHHhhcCCCEEEEEcCCC-------C----CHH
Confidence 741 2789999999954 44 335789999987642 112356799999999999999885531 1 011
Q ss_pred hhhccCCCCCHHHHHHHHHhCCCcEE
Q 019957 292 RILQNYNYLTEEEIEDLCTSCGLTNY 317 (333)
Q Consensus 292 ~~~~~~~~~t~~~l~~ll~~aGf~~v 317 (333)
....+.+.+++.|++..
T Consensus 251 ---------~~~Av~Ef~~~~~i~~~ 267 (282)
T 2wk1_A 251 ---------CKDAVDEYRAKFDIADE 267 (282)
T ss_dssp ---------HHHHHHHHHHHTTCCSC
T ss_pred ---------HHHHHHHHHHhcCCceE
Confidence 13467777888887643
No 289
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.35 E-value=7.9e-06 Score=78.84 Aligned_cols=146 Identities=17% Similarity=0.159 Sum_probs=104.4
Q ss_pred cchhHHHHhhHHhhc----ccCCCCCcHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHh----C---------CCC
Q 019957 129 PFVSFLYERGWRQNF----NRSGFPGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS----G---------TYS 191 (333)
Q Consensus 129 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~----~---------~~~ 191 (333)
+.++..|+...++.. ..+.++.+...++.+.+.+.+.++.+|+|-+||+|.++..+.+. . ...
T Consensus 176 d~lG~~yE~ll~~~~~~~g~~GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~ 255 (530)
T 3ufb_A 176 HTLSRLYETMLREMRDAAGDSGEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQES 255 (530)
T ss_dssp HHHHHHHHHHHHHHTTSSSSCCCCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHhcCcCceECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhh
Confidence 455666777665432 12358899999999999999988889999999999998766543 1 123
Q ss_pred eEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCC----CCCCcceEEecccccc---------CC------C
Q 019957 192 GVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF----ASGFVDAVHAGAALHC---------WP------S 252 (333)
Q Consensus 192 ~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~----~~~~fD~V~~~~vl~h---------~~------d 252 (333)
.++|+|+++.+...|+.++--.| .....+..+|....|. ...+||+|+++--+.- ++ +
T Consensus 256 ~i~G~E~~~~~~~la~mNl~lhg---~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~ 332 (530)
T 3ufb_A 256 SIFGGEAKSLPYLLVQMNLLLHG---LEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAE 332 (530)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHT---CSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCB
T ss_pred hhhhhhccHHHHHHHHHHHHhcC---CccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccch
Confidence 69999999999999998776665 3344667777765442 2357999998644321 11 1
Q ss_pred h-HHHHHHHHHhcc-------CCcEEEEEEecc
Q 019957 253 P-SNAVAEISRILR-------SGGVFVGTTFLR 277 (333)
Q Consensus 253 ~-~~~l~~~~r~Lk-------pgG~l~i~~~~~ 277 (333)
. ..++..+.+.|| +||++.+..|..
T Consensus 333 ~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g 365 (530)
T 3ufb_A 333 TAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNG 365 (530)
T ss_dssp HHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHH
T ss_pred hHHHHHHHHHHHhhhhhhccCCCceEEEEecch
Confidence 1 245777777776 799999998754
No 290
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=98.28 E-value=3e-07 Score=62.17 Aligned_cols=45 Identities=16% Similarity=0.157 Sum_probs=38.3
Q ss_pred ccCeecccCCCccccccCCCCccccccccCceeeCCCCccccCcCCceeeeccc
Q 019957 57 EGDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSKDNYLDLTVIS 110 (333)
Q Consensus 57 ~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~g~~~~~~~~ 110 (333)
..++++||.|+++|..... .+.+.|+.|+..|++++|+++++..+
T Consensus 7 LLeiL~CP~ck~~L~~~~~---------~g~LvC~~c~~~YPI~dGIPvmL~~E 51 (67)
T 2jny_A 7 LLEVLACPKDKGPLRYLES---------EQLLVNERLNLAYRIDDGIPVLLIDE 51 (67)
T ss_dssp GTCCCBCTTTCCBCEEETT---------TTEEEETTTTEEEEEETTEECCCSSC
T ss_pred HHHHhCCCCCCCcCeEeCC---------CCEEEcCCCCccccCCCCEeeeChhH
Confidence 4578999999999876543 36899999999999999999999863
No 291
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=98.24 E-value=3.7e-07 Score=62.00 Aligned_cols=44 Identities=18% Similarity=0.218 Sum_probs=37.7
Q ss_pred ccCeecccCCCccccccCCCCccccccccCceeeCCCCccccCcCCceeeecc
Q 019957 57 EGDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSKDNYLDLTVI 109 (333)
Q Consensus 57 ~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~g~~~~~~~ 109 (333)
..++++||.|+++|..... .+.+.|+.||..|++.+|+++++..
T Consensus 5 LL~iL~CP~ck~~L~~~~~---------~~~LiC~~cg~~YPI~dGIPvmL~~ 48 (68)
T 2jr6_A 5 FLDILVCPVTKGRLEYHQD---------KQELWSRQAKLAYPIKDGIPYMLEN 48 (68)
T ss_dssp SSCCCBCSSSCCBCEEETT---------TTEEEETTTTEEEEEETTEECCCTT
T ss_pred HhhheECCCCCCcCeEeCC---------CCEEEcCCCCcEecCCCCeeeeChh
Confidence 3578999999999876543 2689999999999999999999976
No 292
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=98.24 E-value=3.5e-07 Score=62.10 Aligned_cols=44 Identities=18% Similarity=0.412 Sum_probs=37.6
Q ss_pred ccCeecccCCCccccccCCCCccccccccCceeeCCCCccccCcCCceeeecc
Q 019957 57 EGDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSKDNYLDLTVI 109 (333)
Q Consensus 57 ~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~g~~~~~~~ 109 (333)
..++++||.|+++|..... .+.+.|+.||..|++.+|+++++..
T Consensus 5 LL~iL~CP~ck~~L~~~~~---------~~~LiC~~cg~~YPI~dGIPvmL~~ 48 (68)
T 2hf1_A 5 FLEILVCPLCKGPLVFDKS---------KDELICKGDRLAFPIKDGIPMMLES 48 (68)
T ss_dssp CEEECBCTTTCCBCEEETT---------TTEEEETTTTEEEEEETTEECCCGG
T ss_pred HhhheECCCCCCcCeEeCC---------CCEEEcCCCCcEecCCCCeeeeChh
Confidence 3468899999999876543 3689999999999999999999986
No 293
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=98.24 E-value=3.9e-07 Score=62.30 Aligned_cols=45 Identities=16% Similarity=0.318 Sum_probs=38.4
Q ss_pred ccCeecccCCCccccccCCCCccccccccCceeeCCCCccccCcCCceeeeccc
Q 019957 57 EGDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSKDNYLDLTVIS 110 (333)
Q Consensus 57 ~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~g~~~~~~~~ 110 (333)
..++++||.|+++|..... .+.+.|+.||..|++.+|+++++...
T Consensus 5 LL~iL~CP~ck~~L~~~~~---------~~~LiC~~cg~~YPI~dGIPvmL~~E 49 (70)
T 2js4_A 5 LLDILVCPVCKGRLEFQRA---------QAELVCNADRLAFPVRDGVPIMLEAE 49 (70)
T ss_dssp CCCCCBCTTTCCBEEEETT---------TTEEEETTTTEEEEEETTEECCCGGG
T ss_pred HhhheECCCCCCcCEEeCC---------CCEEEcCCCCceecCCCCeeeeChhh
Confidence 4578999999999876543 36899999999999999999999873
No 294
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=98.22 E-value=4.1e-07 Score=61.97 Aligned_cols=44 Identities=20% Similarity=0.399 Sum_probs=37.5
Q ss_pred ccCeecccCCCccccccCCCCccccccccCceeeCCCCccccCcCCceeeecc
Q 019957 57 EGDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSKDNYLDLTVI 109 (333)
Q Consensus 57 ~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~g~~~~~~~ 109 (333)
..++++||.|+++|..... .+.+.|+.||..|++.+|+++++..
T Consensus 5 LLeiL~CP~ck~~L~~~~~---------~~~LiC~~cg~~YPI~dGIPvmL~~ 48 (69)
T 2pk7_A 5 LLDILACPICKGPLKLSAD---------KTELISKGAGLAYPIRDGIPVMLES 48 (69)
T ss_dssp GGGTCCCTTTCCCCEECTT---------SSEEEETTTTEEEEEETTEECCCGG
T ss_pred HHhheeCCCCCCcCeEeCC---------CCEEEcCCCCcEecCcCCeeeeChh
Confidence 3468899999999876432 3689999999999999999999986
No 295
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.19 E-value=3.8e-06 Score=73.52 Aligned_cols=80 Identities=20% Similarity=0.304 Sum_probs=65.4
Q ss_pred HHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC---
Q 019957 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--- 232 (333)
Q Consensus 156 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp--- 232 (333)
+.+.+.+...+++.+||.+||.|..+..+.+. ..+|+|+|.++.+++.+++ +.. .++.++.+++.+++
T Consensus 12 ~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~~------~rv~lv~~~f~~l~~~L 82 (285)
T 1wg8_A 12 QEALDLLAVRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LHL------PGLTVVQGNFRHLKRHL 82 (285)
T ss_dssp HHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TCC------TTEEEEESCGGGHHHHH
T ss_pred HHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hcc------CCEEEEECCcchHHHHH
Confidence 45556677778889999999999999999997 4499999999999999988 533 48999999998874
Q ss_pred --CCCCCcceEEec
Q 019957 233 --FASGFVDAVHAG 244 (333)
Q Consensus 233 --~~~~~fD~V~~~ 244 (333)
...+++|.|++.
T Consensus 83 ~~~g~~~vDgIL~D 96 (285)
T 1wg8_A 83 AALGVERVDGILAD 96 (285)
T ss_dssp HHTTCSCEEEEEEE
T ss_pred HHcCCCCcCEEEeC
Confidence 122579999963
No 296
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.16 E-value=4.5e-06 Score=76.24 Aligned_cols=108 Identities=12% Similarity=0.146 Sum_probs=78.8
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcC-----cCCCCCeEEEEccCCCC----CCCCC
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDN-----TILTSNLALVRADVCRL----PFASG 236 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~-----~~~~~~i~~~~~d~~~l----p~~~~ 236 (333)
++.+||=||.|.|..++.+.+.. ..+++.+|+++.+++.+++.+.... ....++++++.+|.... +-..+
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~-~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLK-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCeEEEECCCcHHHHHHHHhcC-CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 46799999999999999999865 4689999999999999999864311 01134688999997542 11346
Q ss_pred CcceEEecccccc-CCCh---------HHHHHHHHHhccCCcEEEEEE
Q 019957 237 FVDAVHAGAALHC-WPSP---------SNAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 237 ~fD~V~~~~vl~h-~~d~---------~~~l~~~~r~LkpgG~l~i~~ 274 (333)
+||+|+....-.. ..+| ..+++.+++.|+|||+++...
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 8999997532111 1122 367889999999999998765
No 297
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.14 E-value=3.8e-06 Score=65.86 Aligned_cols=88 Identities=15% Similarity=0.121 Sum_probs=59.1
Q ss_pred CCCeEEEEcCCcC-HHHHHHHH-hCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCC-CCcceEE
Q 019957 166 QGGLLVDVSCGSG-LFSRKFAK-SGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS-GFVDAVH 242 (333)
Q Consensus 166 ~~~~vLDiGcG~G-~~~~~l~~-~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~-~~fD~V~ 242 (333)
++.+|||||||.| ..+..|++ .+. +|+++|+++.+++ +++.|+.+..... +.||+|.
T Consensus 35 ~~~rVlEVG~G~g~~vA~~La~~~g~--~V~atDInp~Av~------------------~v~dDiF~P~~~~Y~~~DLIY 94 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYIRKHSKV--DLVLTDIKPSHGG------------------IVRDDITSPRMEIYRGAALIY 94 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHHHHHSCC--EEEEECSSCSSTT------------------EECCCSSSCCHHHHTTEEEEE
T ss_pred CCCcEEEEccCCChHHHHHHHHhCCC--eEEEEECCccccc------------------eEEccCCCCcccccCCcCEEE
Confidence 3579999999999 69999997 554 8999999886431 7888987743221 4899998
Q ss_pred eccccccCCChHHHHHHHHHhccCCcEEEEEEeccc
Q 019957 243 AGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRY 278 (333)
Q Consensus 243 ~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~ 278 (333)
+..-= ++....+.++.+ +-|.-+++.....+
T Consensus 95 sirPP---~El~~~i~~lA~--~v~adliI~pL~~E 125 (153)
T 2k4m_A 95 SIRPP---AEIHSSLMRVAD--AVGARLIIKPLTGE 125 (153)
T ss_dssp EESCC---TTTHHHHHHHHH--HHTCEEEEECBTTB
T ss_pred EcCCC---HHHHHHHHHHHH--HcCCCEEEEcCCCC
Confidence 76531 122333344433 34667777665443
No 298
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.14 E-value=3.6e-06 Score=73.82 Aligned_cols=106 Identities=12% Similarity=0.122 Sum_probs=68.3
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEec
Q 019957 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~ 244 (333)
.++.+|||+||++|.++..+.+..+...|+|+|+...+...... .... ..++.....+.....+..+.+|+|++.
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~~----~~~iv~~~~~~di~~l~~~~~DlVlsD 154 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQTL----GWNIVKFKDKSNVFTMPTEPSDTLLCD 154 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBT----TGGGEEEECSCCTTTSCCCCCSEEEEC
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-cccc----CCceEEeecCceeeecCCCCcCEEeec
Confidence 46789999999999999999986545578999987532100000 0000 112333333333333446789999997
Q ss_pred cccccCCCh-------HHHHHHHHHhccCC-cEEEEEEec
Q 019957 245 AALHCWPSP-------SNAVAEISRILRSG-GVFVGTTFL 276 (333)
Q Consensus 245 ~vl~h~~d~-------~~~l~~~~r~Lkpg-G~l~i~~~~ 276 (333)
..-. ...+ ..+|.-+.++|+|| |.|++-.+.
T Consensus 155 ~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 155 IGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred CcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 6555 4333 24577778999999 999998766
No 299
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=98.12 E-value=4.3e-07 Score=101.75 Aligned_cols=147 Identities=18% Similarity=0.154 Sum_probs=69.9
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCC-----CCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC-CCCCCCcc
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGT-----YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-PFASGFVD 239 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~-----~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-p~~~~~fD 239 (333)
+..+|||||.|+|..+..+.+... ..+++..|+|+...+.++++++.. .+.....|..+. ++..++||
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~------di~~~~~d~~~~~~~~~~~yd 1313 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL------HVTQGQWDPANPAPGSLGKAD 1313 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH------TEEEECCCSSCCCC-----CC
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc------ccccccccccccccCCCCcee
Confidence 456899999999977665544321 247999999988887777766542 222221233332 34456899
Q ss_pred eEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCCcEEEE
Q 019957 240 AVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTS 319 (333)
Q Consensus 240 ~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf~~v~~ 319 (333)
+|++..+||-.++....|++++++|||||++++.+....... .....++.........+.+.++|..+|.++||..+..
T Consensus 1314 lvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~~~~~~~-g~~~~~~~~~~r~~~~~~~~~~w~~~l~~~gf~~~~~ 1392 (2512)
T 2vz8_A 1314 LLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTLLAGHPL-GEMVGFLTSPEQGGRHLLSQDQWESLFAGASLHLVAL 1392 (2512)
T ss_dssp EEEEECC--------------------CCEEEEEEC---------------------------CTTTTSSTTTTEEEEEE
T ss_pred EEEEcccccccccHHHHHHHHHHhcCCCcEEEEEeccccccc-cccccccccccccCCcccCHHHHHHHHHhCCCceeee
Confidence 999999999888999999999999999999998775431100 0001111111001223577888999999999988764
No 300
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.01 E-value=4.6e-05 Score=66.49 Aligned_cols=110 Identities=15% Similarity=0.163 Sum_probs=75.4
Q ss_pred hcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEc-cCCCCCCCCCCcce
Q 019957 162 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRA-DVCRLPFASGFVDA 240 (333)
Q Consensus 162 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~-d~~~lp~~~~~fD~ 240 (333)
....++.+|||+||++|.++..++.......|+|+|+-..--+.- ....+.+ ...+.++.+ |+..++. ..+|+
T Consensus 90 ~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P-~~~~ql~---w~lV~~~~~~Dv~~l~~--~~~D~ 163 (321)
T 3lkz_A 90 RFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEP-QLVQSYG---WNIVTMKSGVDVFYRPS--ECCDT 163 (321)
T ss_dssp TSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCC-CCCCBTT---GGGEEEECSCCTTSSCC--CCCSE
T ss_pred cCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCc-chhhhcC---CcceEEEeccCHhhCCC--CCCCE
Confidence 344567799999999999999887775455799999865411000 0000111 134778877 8777763 57999
Q ss_pred EEeccccccCCChH-------HHHHHHHHhccCC-cEEEEEEeccc
Q 019957 241 VHAGAALHCWPSPS-------NAVAEISRILRSG-GVFVGTTFLRY 278 (333)
Q Consensus 241 V~~~~vl~h~~d~~-------~~l~~~~r~Lkpg-G~l~i~~~~~~ 278 (333)
|+|.-. +-.+++. ++|+-+.++|++| |-|++-....+
T Consensus 164 ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY 208 (321)
T 3lkz_A 164 LLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPY 208 (321)
T ss_dssp EEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTT
T ss_pred EEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCC
Confidence 999766 7767663 3566667899998 89988776654
No 301
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=98.00 E-value=2.6e-06 Score=55.57 Aligned_cols=43 Identities=26% Similarity=0.580 Sum_probs=36.8
Q ss_pred ccCeecccCCCccccccCCCCccccccccCceeeC--CCCccccCcCCceeeeccc
Q 019957 57 EGDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCR--KCDKTYSSKDNYLDLTVIS 110 (333)
Q Consensus 57 ~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~--~C~~~~~~~~g~~~~~~~~ 110 (333)
..+++.||.|+++|.... +.+.|+ .|+..|++.+|++.++.++
T Consensus 7 lL~iL~CP~c~~~L~~~~-----------~~L~C~~~~c~~~YPI~dGIPvlL~~e 51 (56)
T 2kpi_A 7 LLEILACPACHAPLEERD-----------AELICTGQDCGLAYPVRDGIPVLLVDE 51 (56)
T ss_dssp CTTSCCCSSSCSCEEEET-----------TEEEECSSSCCCEEEEETTEECCCTTT
T ss_pred HHhheeCCCCCCcceecC-----------CEEEcCCcCCCcEEeeECCEeeeCHHH
Confidence 357889999999986643 589999 9999999999999998753
No 302
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.89 E-value=0.00029 Score=63.82 Aligned_cols=158 Identities=13% Similarity=0.178 Sum_probs=102.7
Q ss_pred HHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcC------------------C
Q 019957 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI------------------L 217 (333)
Q Consensus 156 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~------------------~ 217 (333)
..+.+++...+...|+.+|||.......+...++...++-+|. |..++.-++.+...+.. .
T Consensus 87 ~~v~~fl~~~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~ 165 (334)
T 1rjd_A 87 AAILEFLVANEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLID 165 (334)
T ss_dssp HHHHHHHHHCSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEE
T ss_pred HHHHHHHHHCCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccC
Confidence 3344445434567899999999999999888755556777776 77777776666653100 0
Q ss_pred CCCeEEEEccCCCCCC---------CCCCcceEEeccccccCCCh--HHHHHHHHHhccCCcEEEEEEecccCCCcchhh
Q 019957 218 TSNLALVRADVCRLPF---------ASGFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTG 286 (333)
Q Consensus 218 ~~~i~~~~~d~~~lp~---------~~~~fD~V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~ 286 (333)
..+..++.+|+.+... ......++++-.+|.+++.. .++|+.+.+.. |+|.+++.+..........++
T Consensus 166 ~~~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~~~~~~~fg 244 (334)
T 1rjd_A 166 QGRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGGSQPNDRFG 244 (334)
T ss_dssp CSSEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCCCSTTCCHH
T ss_pred CCceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCCCCCcchHH
Confidence 2578999999977421 22456788888889888644 46777777766 788877666554311111223
Q ss_pred HH----HHH-h-h--hccCCCCCHHHHHHHHHhCCCc
Q 019957 287 RV----LRE-R-I--LQNYNYLTEEEIEDLCTSCGLT 315 (333)
Q Consensus 287 ~~----~~~-~-~--~~~~~~~t~~~l~~ll~~aGf~ 315 (333)
+. +.. . . .....+.+.++..+.|.++||+
T Consensus 245 ~~m~~~l~~~rg~~l~~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 245 AIMQSNLKESRNLEMPTLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp HHHHHHHHHHHCCCCTTTTTTCSHHHHHGGGTTSSEE
T ss_pred HHHHHHhhcccCCcccccccCCCHHHHHHHHHHCCCC
Confidence 22 211 1 1 1223467999999999999997
No 303
>2k5r_A Uncharacterized protein XF2673; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Xylella fastidiosa TEMECULA1}
Probab=97.89 E-value=4.7e-06 Score=60.38 Aligned_cols=53 Identities=15% Similarity=0.105 Sum_probs=40.8
Q ss_pred ccCeecccCCCccccccCC------------------CCccccccccCceeeCCCCccccCcCCceeeecc
Q 019957 57 EGDLFSCPICYEPLIRKGP------------------TGLTLGAIYRSGFKCRKCDKTYSSKDNYLDLTVI 109 (333)
Q Consensus 57 ~~~~l~CP~C~~~l~~~~~------------------~~~~~~~~~~~~~~C~~C~~~~~~~~g~~~~~~~ 109 (333)
..++|+||.|+++|..... .+....++..+.+.|+.|+..|++.+|+++++..
T Consensus 5 LLdILaCP~cK~pL~l~~~~~~~~~~ca~~~~~~~~~~~~~~~e~~~~~LvC~~c~~~YPI~dGIPvmL~~ 75 (97)
T 2k5r_A 5 LLHLLCSPDTRQPLSLLESKGLEALNKAIVSGTVQRADGSIQNQSLHEALITRDRKQVFRIEDSIPVLLPE 75 (97)
T ss_dssp TCSSCCCCTTSSCCEECCHHHHHHHHHHHHHTCCBCTTSCBCCCCCSEEEECTTSCEEEEEETTEEECCGG
T ss_pred HhhheECCCCCCcccccccchhhhhhhhhhccccccccccccccccCCeEEcCCCCCCccccCCCcccChH
Confidence 4678999999998765332 1122334456789999999999999999999986
No 304
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.86 E-value=5.3e-05 Score=67.57 Aligned_cols=62 Identities=16% Similarity=0.204 Sum_probs=52.2
Q ss_pred CCcHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc
Q 019957 149 PGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD 213 (333)
Q Consensus 149 ~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~ 213 (333)
+.+.++++.+..... .++..|||++||+|..+..+.+.+. +++|+|+++.+++.|++++...
T Consensus 219 ~~p~~l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~g~--~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 219 PFPLELAERLVRMFS-FVGDVVLDPFAGTGTTLIAAARWGR--RALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp CSCHHHHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHHh
Confidence 345666777776665 5678999999999999999998876 9999999999999999998764
No 305
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.83 E-value=0.00011 Score=62.15 Aligned_cols=108 Identities=19% Similarity=0.211 Sum_probs=73.8
Q ss_pred cccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEc-cCCCCCCCCCCcceE
Q 019957 163 KSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRA-DVCRLPFASGFVDAV 241 (333)
Q Consensus 163 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~-d~~~lp~~~~~fD~V 241 (333)
...++.+|||+||++|.++..++.......|+|+|+-..-.+.- ......| ...++|..+ |+..++ ...+|.|
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P-~~~~s~g---wn~v~fk~gvDv~~~~--~~~~Dtl 148 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEP-VPMSTYG---WNIVKLMSGKDVFYLP--PEKCDTL 148 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCC-CCCCCTT---TTSEEEECSCCGGGCC--CCCCSEE
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCc-chhhhcC---cCceEEEeccceeecC--CccccEE
Confidence 45577899999999999999888775456899999865322100 0001122 367899998 987665 3679999
Q ss_pred EeccccccCCChH-------HHHHHHHHhccCCcEEEEEEeccc
Q 019957 242 HAGAALHCWPSPS-------NAVAEISRILRSGGVFVGTTFLRY 278 (333)
Q Consensus 242 ~~~~vl~h~~d~~-------~~l~~~~r~LkpgG~l~i~~~~~~ 278 (333)
+|.-. +-.+++. ++|+-+.++|++ |-+++-....+
T Consensus 149 lcDIg-eSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py 190 (267)
T 3p8z_A 149 LCDIG-ESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPY 190 (267)
T ss_dssp EECCC-CCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCC
T ss_pred EEecC-CCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCC
Confidence 98644 2334442 356666788998 78888776654
No 306
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.74 E-value=6.4e-05 Score=64.47 Aligned_cols=103 Identities=19% Similarity=0.197 Sum_probs=64.3
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCC-CCe---EEEEc-cCCCCCCCCCCc
Q 019957 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILT-SNL---ALVRA-DVCRLPFASGFV 238 (333)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~-~~i---~~~~~-d~~~lp~~~~~f 238 (333)
..++.+|||+||+.|.++..+++.-.-..|.|.++.... . + ...... .++ .+.++ |+.+++ ...+
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-----~--~P~~~~~~Gv~~i~~~~G~Df~~~~--~~~~ 140 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-----E--EPMLMQSYGWNIVTMKSGVDVFYKP--SEIS 140 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-----C--CCCCCCSTTGGGEEEECSCCGGGSC--CCCC
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-----c--CCCcccCCCceEEEeeccCCccCCC--CCCC
Confidence 456889999999999999999886211133444443220 0 0 000001 233 44447 988754 5689
Q ss_pred ceEEeccccccCCCh----H---HHHHHHHHhccCCc-EEEEEEecc
Q 019957 239 DAVHAGAALHCWPSP----S---NAVAEISRILRSGG-VFVGTTFLR 277 (333)
Q Consensus 239 D~V~~~~vl~h~~d~----~---~~l~~~~r~LkpgG-~l~i~~~~~ 277 (333)
|+|+|...=. ..++ . .+|.-+.++|+||| .|++-.+..
T Consensus 141 DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg 186 (269)
T 2px2_A 141 DTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCP 186 (269)
T ss_dssp SEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred CEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCC
Confidence 9999965433 3322 1 25666778999999 899877663
No 307
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.52 E-value=8.8e-05 Score=66.43 Aligned_cols=82 Identities=18% Similarity=0.263 Sum_probs=64.8
Q ss_pred HHHHHhhcccCCCeEEEEcCCcCHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC--
Q 019957 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-- 232 (333)
Q Consensus 156 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-- 232 (333)
+.+.+.+...+++.++|..+|.|..+..+++. ++..+|+|+|.++.+++.++ ++ . ..++.++.+++.++.
T Consensus 47 ~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL-~-----~~Rv~lv~~nF~~l~~~ 119 (347)
T 3tka_A 47 DEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI-D-----DPRFSIIHGPFSALGEY 119 (347)
T ss_dssp HHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC-C-----CTTEEEEESCGGGHHHH
T ss_pred HHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh-c-----CCcEEEEeCCHHHHHHH
Confidence 44556677778899999999999999999987 56789999999999999884 33 1 468999999998763
Q ss_pred CC----CCCcceEEec
Q 019957 233 FA----SGFVDAVHAG 244 (333)
Q Consensus 233 ~~----~~~fD~V~~~ 244 (333)
.. .+++|.|++.
T Consensus 120 L~~~g~~~~vDgILfD 135 (347)
T 3tka_A 120 VAERDLIGKIDGILLD 135 (347)
T ss_dssp HHHTTCTTCEEEEEEE
T ss_pred HHhcCCCCcccEEEEC
Confidence 11 1368888864
No 308
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.50 E-value=0.0014 Score=58.67 Aligned_cols=147 Identities=17% Similarity=0.070 Sum_probs=95.3
Q ss_pred CeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC---------CCCCCc
Q 019957 168 GLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP---------FASGFV 238 (333)
Q Consensus 168 ~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp---------~~~~~f 238 (333)
..|+++|||.=.....+.. .....++-+| .|..++..++.+...+.....+..++.+|+.+ . +....-
T Consensus 104 ~QvV~LGaGlDTra~Rl~~-~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~P 180 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDW-PTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSAR 180 (310)
T ss_dssp CEEEEETCTTCCHHHHSCC-CTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTSC
T ss_pred CeEEEeCCCCCchhhhccC-CCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCCC
Confidence 4799999998766555542 2235899999 59999998888875432225578899999976 3 111233
Q ss_pred ceEEeccccccCCCh--HHHHHHHHHhccCCcEEEEEEecccCCCc----chhh-HHHHHhh-----h-ccCCC-CC-HH
Q 019957 239 DAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYTSST----SLTG-RVLRERI-----L-QNYNY-LT-EE 303 (333)
Q Consensus 239 D~V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~----~~~~-~~~~~~~-----~-~~~~~-~t-~~ 303 (333)
=++++-.+++++++. ..+++.+...+.||+.+++.......... ..+. ..+.... . ....+ .+ .+
T Consensus 181 t~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~ 260 (310)
T 2uyo_A 181 TAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPLHGDEWREQMQLRFRRVSDALGFEQAVDVQELIYHDENRA 260 (310)
T ss_dssp EEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCTTCSHHHHHHHHHHHHHHC-----------CCTTCCTTCC
T ss_pred EEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCCCCcchhHHHHHHHHHHHHHcCCcCCCCccccccCCCChH
Confidence 467778888988753 57888888888899988887655432100 0001 1121111 1 22333 36 78
Q ss_pred HHHHHHHhCCCcEE
Q 019957 304 EIEDLCTSCGLTNY 317 (333)
Q Consensus 304 ~l~~ll~~aGf~~v 317 (333)
++.+.|.++||+.+
T Consensus 261 ~~~~~f~~~G~~~~ 274 (310)
T 2uyo_A 261 VVADWLNRHGWRAT 274 (310)
T ss_dssp CHHHHHTTTTEEEE
T ss_pred HHHHHHHHCcCccc
Confidence 99999999999987
No 309
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.43 E-value=0.0022 Score=56.83 Aligned_cols=140 Identities=12% Similarity=0.073 Sum_probs=81.9
Q ss_pred cCCCeEEEEcCCcCHHHHHH----HHhCCCC--eEEEEeCCH--------H-HHHHHHHHHHhcCcC--CCCCeEEEEcc
Q 019957 165 AQGGLLVDVSCGSGLFSRKF----AKSGTYS--GVVALDFSE--------N-MLRQCYDFIKQDNTI--LTSNLALVRAD 227 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l----~~~~~~~--~v~g~D~s~--------~-~~~~a~~~~~~~~~~--~~~~i~~~~~d 227 (333)
.+.-+|||+|-|+|.+.... .+..+.. +++.+|..+ . ..+..+......... ..-.+++..+|
T Consensus 95 ~~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GD 174 (308)
T 3vyw_A 95 RKVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGD 174 (308)
T ss_dssp CSEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESC
T ss_pred CCCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEech
Confidence 33457999999999865432 2335544 456666421 1 111122222211000 02245677888
Q ss_pred CCC-CC-CCCCCcceEEeccccccCCCh----HHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCC
Q 019957 228 VCR-LP-FASGFVDAVHAGAALHCWPSP----SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLT 301 (333)
Q Consensus 228 ~~~-lp-~~~~~fD~V~~~~vl~h~~d~----~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 301 (333)
+.+ ++ +.+..||+|+... +---.+| ..+++.++++++|||+|.- +. .
T Consensus 175 a~~~l~~l~~~~~Da~flDg-FsP~kNPeLWs~e~f~~l~~~~~pgg~laT--Yt------------------------a 227 (308)
T 3vyw_A 175 ARKRIKEVENFKADAVFHDA-FSPYKNPELWTLDFLSLIKERIDEKGYWVS--YS------------------------S 227 (308)
T ss_dssp HHHHGGGCCSCCEEEEEECC-SCTTTSGGGGSHHHHHHHHTTEEEEEEEEE--SC------------------------C
T ss_pred HHHHHhhhcccceeEEEeCC-CCcccCcccCCHHHHHHHHHHhCCCcEEEE--Ee------------------------C
Confidence 854 33 3455899999854 2333455 5899999999999998864 22 2
Q ss_pred HHHHHHHHHhCCCcEEEEEEeCe-EEEEEEe
Q 019957 302 EEEIEDLCTSCGLTNYTSKVQQS-FIMFAAQ 331 (333)
Q Consensus 302 ~~~l~~ll~~aGf~~v~~~~~~~-~~~~~a~ 331 (333)
...+++.|+++||++.+....+. --+.+|.
T Consensus 228 ag~VRR~L~~aGF~V~k~~G~g~KReml~A~ 258 (308)
T 3vyw_A 228 SLSVRKSLLTLGFKVGSSREIGRKRKGTVAS 258 (308)
T ss_dssp CHHHHHHHHHTTCEEEEEECC---CEEEEEE
T ss_pred cHHHHHHHHHCCCEEEecCCCCCCCceeEEe
Confidence 24788999999999887543322 2444444
No 310
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.37 E-value=0.00065 Score=61.77 Aligned_cols=75 Identities=12% Similarity=0.088 Sum_probs=59.3
Q ss_pred cHHHHHHHHHhhcccC------CCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEE
Q 019957 151 PDEEFKMAQEYFKSAQ------GGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 224 (333)
Q Consensus 151 ~~~~~~~~~~~l~~~~------~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~ 224 (333)
.....+.|.+.+...+ +..|||||.|.|.++..|.+.....+++++|+++..+...++.. . ..++.++
T Consensus 37 d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~-----~~~l~ii 110 (353)
T 1i4w_A 37 NPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E-----GSPLQIL 110 (353)
T ss_dssp CHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T-----TSSCEEE
T ss_pred CHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c-----CCCEEEE
Confidence 4556677777776543 57899999999999999998632348999999999998888765 2 4589999
Q ss_pred EccCCCC
Q 019957 225 RADVCRL 231 (333)
Q Consensus 225 ~~d~~~l 231 (333)
.+|+..+
T Consensus 111 ~~D~l~~ 117 (353)
T 1i4w_A 111 KRDPYDW 117 (353)
T ss_dssp CSCTTCH
T ss_pred ECCccch
Confidence 9999554
No 311
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.32 E-value=0.00073 Score=58.90 Aligned_cols=63 Identities=19% Similarity=0.227 Sum_probs=51.4
Q ss_pred CCcHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcC
Q 019957 149 PGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDN 214 (333)
Q Consensus 149 ~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~ 214 (333)
+.+..+++.+.+... .++..|||..||+|..+..+.+.+. +++|+|+++..++.++++++..+
T Consensus 196 ~~p~~l~~~~i~~~~-~~~~~vlD~f~GsGtt~~~a~~~gr--~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 196 PKPRDLIERIIRASS-NPNDLVLDCFMGSGTTAIVAKKLGR--NFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp CCCHHHHHHHHHHHC-CTTCEEEESSCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHC--
T ss_pred CCCHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhcc
Confidence 445667767666654 4678999999999999999998876 99999999999999999987643
No 312
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.13 E-value=0.0012 Score=57.71 Aligned_cols=96 Identities=9% Similarity=0.009 Sum_probs=64.2
Q ss_pred ccCCCeEEEEcC------CcCHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCC
Q 019957 164 SAQGGLLVDVSC------GSGLFSRKFAKSGTY-SGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG 236 (333)
Q Consensus 164 ~~~~~~vLDiGc------G~G~~~~~l~~~~~~-~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~ 236 (333)
...+.+|||+|+ ..|. ..+++.++. +.++++|+.+-.. ... .++++|...+.. .+
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~~~s--------------da~-~~IqGD~~~~~~-~~ 168 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFVS--------------DAD-STLIGDCATVHT-AN 168 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCBC--------------SSS-EEEESCGGGEEE-SS
T ss_pred ecCCCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCccccc--------------CCC-eEEEcccccccc-CC
Confidence 345789999996 5566 355555665 5899999976321 123 459999765432 47
Q ss_pred CcceEEecccc---ccC--CC------hHHHHHHHHHhccCCcEEEEEEecc
Q 019957 237 FVDAVHAGAAL---HCW--PS------PSNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 237 ~fD~V~~~~vl---~h~--~d------~~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
+||+|+|-..= .+. .. -..++.-+.++|+|||.|++-.+..
T Consensus 169 k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQG 220 (344)
T 3r24_A 169 KWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH 220 (344)
T ss_dssp CEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred CCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecC
Confidence 89999984331 111 11 1356777788999999999987544
No 313
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=96.64 E-value=0.0014 Score=41.55 Aligned_cols=34 Identities=26% Similarity=0.531 Sum_probs=25.0
Q ss_pred cCeecccCCCc-cccccCCCCccccccccCceeeCCCCccccCc
Q 019957 58 GDLFSCPICYE-PLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSK 100 (333)
Q Consensus 58 ~~~l~CP~C~~-~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~ 100 (333)
...+.||.|++ .+..... .+.+.|..||..|...
T Consensus 3 ~~~~~CP~C~~~~l~~d~~---------~gelvC~~CG~v~~e~ 37 (50)
T 1pft_A 3 NKQKVCPACESAELIYDPE---------RGEIVCAKCGYVIEEN 37 (50)
T ss_dssp SSCCSCTTTSCCCEEEETT---------TTEEEESSSCCBCCCC
T ss_pred CccEeCcCCCCcceEEcCC---------CCeEECcccCCccccc
Confidence 35678999999 6654332 3689999999988543
No 314
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.48 E-value=0.013 Score=53.04 Aligned_cols=125 Identities=12% Similarity=0.105 Sum_probs=77.6
Q ss_pred CeEEEEcCCcCHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCC---CCCCcceEEe
Q 019957 168 GLLVDVSCGSGLFSRKFAKSGTY-SGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF---ASGFVDAVHA 243 (333)
Q Consensus 168 ~~vLDiGcG~G~~~~~l~~~~~~-~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~---~~~~fD~V~~ 243 (333)
.+|||+-||.|.+...+...|.. ..+.++|+++.+++..+.+. ++..++.+|+.++.. ....+|+|+.
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~--------~~~~~~~~Di~~~~~~~~~~~~~D~l~~ 74 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNF--------PHTQLLAKTIEGITLEEFDRLSFDMILM 74 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHC--------TTSCEECSCGGGCCHHHHHHHCCSEEEE
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhc--------cccccccCCHHHccHhHcCcCCcCEEEE
Confidence 47999999999999999988732 36999999999999888863 344577889887642 1126899998
Q ss_pred ccccccC---------CChH-HHHHHHHHhc---c--CCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHH
Q 019957 244 GAALHCW---------PSPS-NAVAEISRIL---R--SGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDL 308 (333)
Q Consensus 244 ~~vl~h~---------~d~~-~~l~~~~r~L---k--pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~l 308 (333)
..--+.+ .|+. .++.++.+++ + |. +++.+.... + .. .-+.+.+.+.
T Consensus 75 gpPCq~fS~ag~~~g~~d~r~~l~~~~~~~i~~~~~~P~--~~~~ENV~~-----l-~~-----------~~~~~~i~~~ 135 (343)
T 1g55_A 75 SPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPK--YILLENVKG-----F-EV-----------SSTRDLLIQT 135 (343)
T ss_dssp CCC------------------CHHHHHHHHGGGCSSCCS--EEEEEEETT-----G-GG-----------SHHHHHHHHH
T ss_pred cCCCcchhhcCCcCCccCccchHHHHHHHHHHHhcCCCC--EEEEeCCcc-----c-cC-----------HHHHHHHHHH
Confidence 5442222 2332 2344444444 4 44 333332221 0 00 0124678888
Q ss_pred HHhCCCcEEEE
Q 019957 309 CTSCGLTNYTS 319 (333)
Q Consensus 309 l~~aGf~~v~~ 319 (333)
|++.|+.+...
T Consensus 136 l~~~GY~v~~~ 146 (343)
T 1g55_A 136 IENCGFQYQEF 146 (343)
T ss_dssp HHHTTEEEEEE
T ss_pred HHHCCCeeEEE
Confidence 89999987553
No 315
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=96.36 E-value=0.0024 Score=55.80 Aligned_cols=106 Identities=8% Similarity=-0.053 Sum_probs=80.0
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC-CC---CCCCCcceE
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LP---FASGFVDAV 241 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-lp---~~~~~fD~V 241 (333)
.+..+||+=+|+|.++..+...+ .+++.+|.++...+..+++++. ..++.++..|... +. -+..+||+|
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS~~--d~~vfvE~~~~a~~~L~~Nl~~-----~~~~~V~~~D~~~~L~~l~~~~~~fdLV 163 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLRSQ--DRLYLCELHPTEYNFLLKLPHF-----NKKVYVNHTDGVSKLNALLPPPEKRGLI 163 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSCTT--SEEEEECCSHHHHHHHTTSCCT-----TSCEEEECSCHHHHHHHHCSCTTSCEEE
T ss_pred cCCCceeEeCCcHHHHHHHcCCC--CeEEEEeCCHHHHHHHHHHhCc-----CCcEEEEeCcHHHHHHHhcCCCCCccEE
Confidence 35579999999999999988854 4999999999999988887654 4579999999643 21 224579999
Q ss_pred EeccccccCCChHHHHHHHHH--hccCCcEEEEEEeccc
Q 019957 242 HAGAALHCWPSPSNAVAEISR--ILRSGGVFVGTTFLRY 278 (333)
Q Consensus 242 ~~~~vl~h~~d~~~~l~~~~r--~LkpgG~l~i~~~~~~ 278 (333)
++.=-.+.-.+..++++.+.+ .+.++|++++.-|...
T Consensus 164 fiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~ 202 (283)
T 2oo3_A 164 FIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVN 202 (283)
T ss_dssp EECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEESS
T ss_pred EECCCCCCCcHHHHHHHHHHHhCccCCCeEEEEEEeccc
Confidence 997665543455666766665 4568999999877654
No 316
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.26 E-value=0.023 Score=51.19 Aligned_cols=99 Identities=18% Similarity=0.200 Sum_probs=65.9
Q ss_pred hhcccCCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC--C--CC
Q 019957 161 YFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--F--AS 235 (333)
Q Consensus 161 ~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp--~--~~ 235 (333)
.....++.+||-+|+|. |.++..+++.. +.+|+++|.++..++.+++. | --.++...-.++. . ..
T Consensus 161 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l----G-----a~~~i~~~~~~~~~~~~~~~ 230 (340)
T 3s2e_A 161 VTDTRPGQWVVISGIGGLGHVAVQYARAM-GLRVAAVDIDDAKLNLARRL----G-----AEVAVNARDTDPAAWLQKEI 230 (340)
T ss_dssp TTTCCTTSEEEEECCSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHT----T-----CSEEEETTTSCHHHHHHHHH
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHc----C-----CCEEEeCCCcCHHHHHHHhC
Confidence 34556788999999976 88888888874 44999999999988887662 1 1122221111110 0 12
Q ss_pred CCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
+.+|+|+.... -...++.+.+.|+++|++++...
T Consensus 231 g~~d~vid~~g------~~~~~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 231 GGAHGVLVTAV------SPKAFSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp SSEEEEEESSC------CHHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCCEEEEeCC------CHHHHHHHHHHhccCCEEEEeCC
Confidence 36888875432 24568899999999999988643
No 317
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=96.25 E-value=0.044 Score=49.24 Aligned_cols=127 Identities=12% Similarity=0.088 Sum_probs=83.1
Q ss_pred CCeEEEEcCCcCHHHHHHHHhCCC-CeE-EEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCC---CCCCcceE
Q 019957 167 GGLLVDVSCGSGLFSRKFAKSGTY-SGV-VALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF---ASGFVDAV 241 (333)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~~~~-~~v-~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~---~~~~fD~V 241 (333)
.-+++|+-||.|.+...+...|.. ..+ .++|+++.+.+..+.+... . ++.+|+.++.. +...+|++
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~--------~-~~~~DI~~~~~~~i~~~~~Dil 80 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE--------E-VQVKNLDSISIKQIESLNCNTW 80 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC--------C-CBCCCTTTCCHHHHHHTCCCEE
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC--------C-cccCChhhcCHHHhccCCCCEE
Confidence 458999999999999999998732 346 7999999998888876532 1 56788877642 22368999
Q ss_pred EeccccccC-----------CChH-HHHHHHHH-hccC---CcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHH
Q 019957 242 HAGAALHCW-----------PSPS-NAVAEISR-ILRS---GGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEI 305 (333)
Q Consensus 242 ~~~~vl~h~-----------~d~~-~~l~~~~r-~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l 305 (333)
+...--..+ .|+. .++.++.+ +++. .-.+++.+.... + .. .-+.+.+
T Consensus 81 ~ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~g-----l-~~-----------~~~~~~i 143 (327)
T 3qv2_A 81 FMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPL-----F-KE-----------SLVFKEI 143 (327)
T ss_dssp EECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGG-----G-GG-----------SHHHHHH
T ss_pred EecCCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhh-----h-cC-----------hHHHHHH
Confidence 975443333 3554 45666666 5542 234555554332 1 10 0134678
Q ss_pred HHHHHhCCCcEEEE
Q 019957 306 EDLCTSCGLTNYTS 319 (333)
Q Consensus 306 ~~ll~~aGf~~v~~ 319 (333)
.+.|++.|+.+...
T Consensus 144 ~~~l~~~GY~v~~~ 157 (327)
T 3qv2_A 144 YNILIKNQYYIKDI 157 (327)
T ss_dssp HHHHHHTTCEEEEE
T ss_pred HHHHHhCCCEEEEE
Confidence 88899999987554
No 318
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.13 E-value=0.039 Score=50.58 Aligned_cols=71 Identities=18% Similarity=0.152 Sum_probs=56.0
Q ss_pred CeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCC--------CCCCcc
Q 019957 168 GLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF--------ASGFVD 239 (333)
Q Consensus 168 ~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~--------~~~~fD 239 (333)
.++||+-||.|.++.-+...|. ..+.++|+++.+++..+.+ .++..++.+|+.++.. ....+|
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~-~~v~avE~d~~a~~t~~~N--------~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D 73 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGF-DVKMAVEIDQHAINTHAIN--------FPRSLHVQEDVSLLNAEIIKGFFKNDMPID 73 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTC-EEEEEECSCHHHHHHHHHH--------CTTSEEECCCGGGCCHHHHHHHHCSCCCCC
T ss_pred CeEEEEccCcCHHHHHHHHCCC-cEEEEEeCCHHHHHHHHHh--------CCCCceEecChhhcCHHHHHhhcccCCCee
Confidence 4799999999999999999884 3577999999998887775 4466788899987641 245799
Q ss_pred eEEecccc
Q 019957 240 AVHAGAAL 247 (333)
Q Consensus 240 ~V~~~~vl 247 (333)
+|+..---
T Consensus 74 ~i~ggpPC 81 (376)
T 3g7u_A 74 GIIGGPPC 81 (376)
T ss_dssp EEEECCCC
T ss_pred EEEecCCC
Confidence 99975443
No 319
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.09 E-value=0.022 Score=52.06 Aligned_cols=100 Identities=17% Similarity=0.123 Sum_probs=66.0
Q ss_pred hhcccCCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC-----CCC
Q 019957 161 YFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-----PFA 234 (333)
Q Consensus 161 ~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-----p~~ 234 (333)
.....++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++. | . -.++..+-.++ ...
T Consensus 185 ~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l----G----a-~~vi~~~~~~~~~~~~~~~ 255 (371)
T 1f8f_A 185 ALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL----G----A-THVINSKTQDPVAAIKEIT 255 (371)
T ss_dssp TTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH----T----C-SEEEETTTSCHHHHHHHHT
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc----C----C-CEEecCCccCHHHHHHHhc
Confidence 34556788999999986 88888887764233699999999988888753 1 1 11222211111 011
Q ss_pred CCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 235 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
++.+|+|+-... . ...++.+.+.|++||++++...
T Consensus 256 ~gg~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 256 DGGVNFALESTG-----S-PEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp TSCEEEEEECSC-----C-HHHHHHHHHTEEEEEEEEECCC
T ss_pred CCCCcEEEECCC-----C-HHHHHHHHHHHhcCCEEEEeCC
Confidence 236999875432 1 3458889999999999987653
No 320
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.03 E-value=0.051 Score=50.01 Aligned_cols=103 Identities=14% Similarity=0.128 Sum_probs=69.8
Q ss_pred hcccCCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC-CC-----C-
Q 019957 162 FKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LP-----F- 233 (333)
Q Consensus 162 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-lp-----~- 233 (333)
....++.+||-+|+|. |.++..+++......|+++|.++..++.+++. +.+.+...-.+ +. .
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~l----------Ga~~i~~~~~~~~~~~v~~~t 250 (398)
T 1kol_A 181 AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ----------GFEIADLSLDTPLHEQIAALL 250 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----------TCEEEETTSSSCHHHHHHHHH
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHc----------CCcEEccCCcchHHHHHHHHh
Confidence 4556788999999876 88888888875333799999999988888652 22333221111 00 0
Q ss_pred CCCCcceEEecccc---------ccCCChHHHHHHHHHhccCCcEEEEEE
Q 019957 234 ASGFVDAVHAGAAL---------HCWPSPSNAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 234 ~~~~fD~V~~~~vl---------~h~~d~~~~l~~~~r~LkpgG~l~i~~ 274 (333)
....+|+|+-.-.- .|.+++...++.+.+.|++||++++..
T Consensus 251 ~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 251 GEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp SSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred CCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 12369999864332 234456667899999999999998754
No 321
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.99 E-value=0.038 Score=49.88 Aligned_cols=95 Identities=14% Similarity=0.128 Sum_probs=65.6
Q ss_pred hcccCCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcce
Q 019957 162 FKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDA 240 (333)
Q Consensus 162 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~ 240 (333)
....++.+||-+|+|. |.++..+++.. +.+|+++|.++..++.+++. | .. .++ .+...+. +.+|+
T Consensus 172 ~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l----G----a~-~v~-~~~~~~~---~~~D~ 237 (348)
T 3two_A 172 SKVTKGTKVGVAGFGGLGSMAVKYAVAM-GAEVSVFARNEHKKQDALSM----G----VK-HFY-TDPKQCK---EELDF 237 (348)
T ss_dssp TTCCTTCEEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSTTHHHHHHT----T----CS-EEE-SSGGGCC---SCEEE
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHhc----C----CC-eec-CCHHHHh---cCCCE
Confidence 3566788999999986 88888888774 44999999999888877652 1 11 222 3333322 27999
Q ss_pred EEeccccccCCChHHHHHHHHHhccCCcEEEEEEec
Q 019957 241 VHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 241 V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
|+-...-. ..+..+.+.|+++|++++....
T Consensus 238 vid~~g~~------~~~~~~~~~l~~~G~iv~~G~~ 267 (348)
T 3two_A 238 IISTIPTH------YDLKDYLKLLTYNGDLALVGLP 267 (348)
T ss_dssp EEECCCSC------CCHHHHHTTEEEEEEEEECCCC
T ss_pred EEECCCcH------HHHHHHHHHHhcCCEEEEECCC
Confidence 98543211 1377888999999999887543
No 322
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=95.99 E-value=0.53 Score=42.23 Aligned_cols=160 Identities=13% Similarity=0.167 Sum_probs=95.6
Q ss_pred HHHHHhhccc-CCCeEEEEcCCcCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhcC--------------c----
Q 019957 156 KMAQEYFKSA-QGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDN--------------T---- 215 (333)
Q Consensus 156 ~~~~~~l~~~-~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~--------------~---- 215 (333)
..+.+++... +...|+-+|||.=.....+...+ +...++=+|. |+.++.=++.+...+ .
T Consensus 79 ~~v~~fl~~~~~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~ 157 (334)
T 3iei_A 79 QLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDG 157 (334)
T ss_dssp HHHHHHHHHTTTCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCT
T ss_pred HHHHHHHHhCCCCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhccccccccccccc
Confidence 4445555543 45689999999987777777642 3456777775 444443223333210 0
Q ss_pred --CCCCCeEEEEccCCCCC----------CCCCCcceEEeccccccCCCh--HHHHHHHHHhccCCcEEEEEEecccCCC
Q 019957 216 --ILTSNLALVRADVCRLP----------FASGFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYTSS 281 (333)
Q Consensus 216 --~~~~~i~~~~~d~~~lp----------~~~~~fD~V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~ 281 (333)
....+..++.+|+.+.. +....-=++++-.++.+++.. ..+|+.+.+.. |+|.+++.++..+.
T Consensus 158 ~~l~s~~y~~v~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f-~~~~~i~yE~i~p~-- 234 (334)
T 3iei_A 158 HILDSKRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSF-ERAMFINYEQVNMG-- 234 (334)
T ss_dssp TEEECSSEEEEECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCTT--
T ss_pred ccCCCCceEEEccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhC-CCceEEEEeccCCC--
Confidence 01357789999987631 223334467778888887643 46677777665 55666666665432
Q ss_pred cchhhHHHHHhh-------hccCCCCCHHHHHHHHHhCCCcEEEEE
Q 019957 282 TSLTGRVLRERI-------LQNYNYLTEEEIEDLCTSCGLTNYTSK 320 (333)
Q Consensus 282 ~~~~~~~~~~~~-------~~~~~~~t~~~l~~ll~~aGf~~v~~~ 320 (333)
.++ ++.+.... .....|.+.++..+.|.++||+.+...
T Consensus 235 d~f-g~~M~~~l~~~g~pl~sl~~y~t~~~~~~r~~~~Gw~~~~~~ 279 (334)
T 3iei_A 235 DRF-GQIMIENLRRRQCDLAGVETCKSLESQKERLLSNGWETASAV 279 (334)
T ss_dssp SHH-HHHHHHHHHTTTCCCTTGGGGGCHHHHHHHHHTTTCSEEEEE
T ss_pred CHH-HHHHHHHHHHhCCCCcccccCCCHHHHHHHHHHcCCCcceee
Confidence 222 33222211 133456788999999999999987643
No 323
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.92 E-value=0.035 Score=51.24 Aligned_cols=105 Identities=14% Similarity=0.100 Sum_probs=68.1
Q ss_pred HhhcccCCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC-C-----
Q 019957 160 EYFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-P----- 232 (333)
Q Consensus 160 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-p----- 232 (333)
......++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++. +.+.+...-.+. .
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----------Ga~~i~~~~~~~~~~~~~~ 248 (398)
T 2dph_A 179 VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDA----------GFETIDLRNSAPLRDQIDQ 248 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTT----------TCEEEETTSSSCHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc----------CCcEEcCCCcchHHHHHHH
Confidence 344566788999999987 88888888764233899999999888877641 223332221121 0
Q ss_pred C-CCCCcceEEeccccccC--------CChHHHHHHHHHhccCCcEEEEEE
Q 019957 233 F-ASGFVDAVHAGAALHCW--------PSPSNAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 233 ~-~~~~fD~V~~~~vl~h~--------~d~~~~l~~~~r~LkpgG~l~i~~ 274 (333)
. ....+|+|+-.-.-... .++...++++.+.|++||++++..
T Consensus 249 ~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 249 ILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp HHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred HhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 0 12369999864432210 023356889999999999988754
No 324
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=95.87 E-value=0.07 Score=48.00 Aligned_cols=99 Identities=16% Similarity=0.119 Sum_probs=61.4
Q ss_pred hcccCCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC------CC
Q 019957 162 FKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------FA 234 (333)
Q Consensus 162 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------~~ 234 (333)
....++.+||=+|+|. |.++..+++.....+|+++|.+++-++.+++. ..-.++...-.+.. ..
T Consensus 159 ~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~---------Ga~~~i~~~~~~~~~~v~~~t~ 229 (348)
T 4eez_A 159 SGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKI---------GADVTINSGDVNPVDEIKKITG 229 (348)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHT---------TCSEEEEC-CCCHHHHHHHHTT
T ss_pred cCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhc---------CCeEEEeCCCCCHHHHhhhhcC
Confidence 3456788999999987 45555555543356999999999888777662 11122221111110 11
Q ss_pred CCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 235 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
...+|.++.... -...+....+.|+++|.+++...
T Consensus 230 g~g~d~~~~~~~------~~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 230 GLGVQSAIVCAV------ARIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp SSCEEEEEECCS------CHHHHHHHHHTEEEEEEEEECCC
T ss_pred CCCceEEEEecc------CcchhheeheeecCCceEEEEec
Confidence 234666654322 24568888999999999887653
No 325
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.81 E-value=0.026 Score=52.36 Aligned_cols=64 Identities=11% Similarity=0.104 Sum_probs=49.9
Q ss_pred cCCCeEEEEcCCcCHHHHHHH-HhCCC-CeEEEEeCCHHHHHHHHHHHHh--cCcCCC-CCeEEEEccCCC
Q 019957 165 AQGGLLVDVSCGSGLFSRKFA-KSGTY-SGVVALDFSENMLRQCYDFIKQ--DNTILT-SNLALVRADVCR 230 (333)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~-~~~~~-~~v~g~D~s~~~~~~a~~~~~~--~~~~~~-~~i~~~~~d~~~ 230 (333)
.++..++|||++.|.++..++ +.++. .+|+++|+++...+..++++.. ++. . .++.++..-+.+
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~--~~~~v~~~~~al~~ 293 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTN--FASRITVHGCGAGE 293 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTST--TGGGEEEECSEECS
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccC--CCCCEEEEEeEEEC
Confidence 567899999999999999887 45543 6999999999999999998876 221 3 577776655543
No 326
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.53 E-value=0.093 Score=47.64 Aligned_cols=99 Identities=14% Similarity=0.076 Sum_probs=66.0
Q ss_pred hhcccCCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC------C
Q 019957 161 YFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------F 233 (333)
Q Consensus 161 ~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------~ 233 (333)
.....++.+||-+|+|. |.++..+++.. +.+|+++|.++..++.+++. | . -.++..+..++. .
T Consensus 184 ~~~~~~g~~VlV~G~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l----G----a-~~vi~~~~~~~~~~v~~~~ 253 (363)
T 3uog_A 184 KGHLRAGDRVVVQGTGGVALFGLQIAKAT-GAEVIVTSSSREKLDRAFAL----G----A-DHGINRLEEDWVERVYALT 253 (363)
T ss_dssp TTCCCTTCEEEEESSBHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH----T----C-SEEEETTTSCHHHHHHHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEecCchhHHHHHHc----C----C-CEEEcCCcccHHHHHHHHh
Confidence 34556788999999876 77887887764 44999999999888887663 1 1 122222111110 1
Q ss_pred CCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEec
Q 019957 234 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
....+|+|+-... ...+..+.+.|++||.+++....
T Consensus 254 ~g~g~D~vid~~g-------~~~~~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 254 GDRGADHILEIAG-------GAGLGQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp TTCCEEEEEEETT-------SSCHHHHHHHEEEEEEEEEECCC
T ss_pred CCCCceEEEECCC-------hHHHHHHHHHhhcCCEEEEEecC
Confidence 1337999986543 12377788999999999887543
No 327
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=95.43 E-value=0.045 Score=54.33 Aligned_cols=127 Identities=18% Similarity=0.168 Sum_probs=79.5
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhC-------CC-----CeEEEEeC---CHHHHHHHH-----------HHHHhcCc----
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSG-------TY-----SGVVALDF---SENMLRQCY-----------DFIKQDNT---- 215 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~-------~~-----~~v~g~D~---s~~~~~~a~-----------~~~~~~~~---- 215 (333)
+.-+|||+|.|+|.+...+.+.. |. .+++.+|. +.+.+..+- +.+.....
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 34689999999998776654431 11 46899998 555554432 22222110
Q ss_pred ------C-CCCCeEEEEccCCC-CC-CC---CCCcceEEeccccccCCCh----HHHHHHHHHhccCCcEEEEEEecccC
Q 019957 216 ------I-LTSNLALVRADVCR-LP-FA---SGFVDAVHAGAALHCWPSP----SNAVAEISRILRSGGVFVGTTFLRYT 279 (333)
Q Consensus 216 ------~-~~~~i~~~~~d~~~-lp-~~---~~~fD~V~~~~vl~h~~d~----~~~l~~~~r~LkpgG~l~i~~~~~~~ 279 (333)
. ....++++.+|+.+ ++ +. +..+|+++....--. .+| ..++..+.++++|||.+...+
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~-~np~~w~~~~~~~l~~~~~~g~~~~t~~----- 211 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPA-KNPDMWNEQLFNAMARMTRPGGTFSTFT----- 211 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC---CCTTCSHHHHHHHHHHEEEEEEEEESC-----
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCC-CChhhhhHHHHHHHHHHhCCCCEEEecc-----
Confidence 0 01256778888843 33 11 468999998553221 122 578999999999999865422
Q ss_pred CCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCCcEEEE
Q 019957 280 SSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTS 319 (333)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf~~v~~ 319 (333)
....+++.+.++||.+.+.
T Consensus 212 ---------------------~~~~vr~~l~~aGf~~~~~ 230 (689)
T 3pvc_A 212 ---------------------AAGFVRRGLQQAGFNVTKV 230 (689)
T ss_dssp ---------------------CCHHHHHHHHHTTCEEEEE
T ss_pred ---------------------CcHHHHHHHHhCCeEEEec
Confidence 1247888899999987764
No 328
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.37 E-value=0.05 Score=44.65 Aligned_cols=94 Identities=20% Similarity=0.130 Sum_probs=59.8
Q ss_pred hcccCCCeEEEEcC--CcCHHHHHHHH-hCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC------
Q 019957 162 FKSAQGGLLVDVSC--GSGLFSRKFAK-SGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------ 232 (333)
Q Consensus 162 l~~~~~~~vLDiGc--G~G~~~~~l~~-~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------ 232 (333)
....++.+||.+|+ |.|..+..+.+ .+. +|+++|.+++.++.+++ .+ .. ..+ |..+..
T Consensus 34 ~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~--~V~~~~~~~~~~~~~~~----~g----~~-~~~--d~~~~~~~~~~~ 100 (198)
T 1pqw_A 34 GRLSPGERVLIHSATGGVGMAAVSIAKMIGA--RIYTTAGSDAKREMLSR----LG----VE-YVG--DSRSVDFADEIL 100 (198)
T ss_dssp SCCCTTCEEEETTTTSHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHT----TC----CS-EEE--ETTCSTHHHHHH
T ss_pred hCCCCCCEEEEeeCCChHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH----cC----CC-EEe--eCCcHHHHHHHH
Confidence 34567889999994 44666555554 454 89999999887766543 12 11 112 332211
Q ss_pred --CCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 233 --FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 233 --~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
...+.+|+|+.... ...++.+.+.|++||++++...
T Consensus 101 ~~~~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 101 ELTDGYGVDVVLNSLA-------GEAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp HHTTTCCEEEEEECCC-------THHHHHHHHTEEEEEEEEECSC
T ss_pred HHhCCCCCeEEEECCc-------hHHHHHHHHHhccCCEEEEEcC
Confidence 11246999986542 2457889999999999987654
No 329
>3q87_A Putative uncharacterized protein ECU08_1170; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=95.35 E-value=0.0049 Score=46.71 Aligned_cols=28 Identities=14% Similarity=0.428 Sum_probs=24.3
Q ss_pred ccccCceeeCCCCccccCcCCceeeecc
Q 019957 82 AIYRSGFKCRKCDKTYSSKDNYLDLTVI 109 (333)
Q Consensus 82 ~~~~~~~~C~~C~~~~~~~~g~~~~~~~ 109 (333)
.+.+|.+.|++||+.|++++|+++.+..
T Consensus 94 ~V~EG~L~Cp~cgr~ypI~~GIPNm~~~ 121 (125)
T 3q87_A 94 DVVEGSLRCDMCGLIYPIKGSIVETVDT 121 (125)
T ss_dssp EEEEEEEEETTTCCEEEEETTEEECSSC
T ss_pred EEEEEEEECCCCCCEeeccCCcccHHHh
Confidence 3556899999999999999999998754
No 330
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.31 E-value=0.29 Score=44.53 Aligned_cols=102 Identities=20% Similarity=0.238 Sum_probs=67.6
Q ss_pred HhhcccCCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC-----C-
Q 019957 160 EYFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-----P- 232 (333)
Q Consensus 160 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-----p- 232 (333)
......++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++. | -. ..+...-.++ .
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----G----a~-~vi~~~~~~~~~~i~~~ 246 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV----G----AT-ATVDPSAGDVVEAIAGP 246 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----T----CS-EEECTTSSCHHHHHHST
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----C----CC-EEECCCCcCHHHHHHhh
Confidence 344566788999999976 78888888875334899999999988887763 1 11 1221111110 0
Q ss_pred --CCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEec
Q 019957 233 --FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 233 --~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
...+.+|+|+-.-. . ...++.+.+.|++||++++....
T Consensus 247 ~~~~~gg~Dvvid~~G-----~-~~~~~~~~~~l~~~G~vv~~G~~ 286 (370)
T 4ej6_A 247 VGLVPGGVDVVIECAG-----V-AETVKQSTRLAKAGGTVVILGVL 286 (370)
T ss_dssp TSSSTTCEEEEEECSC-----C-HHHHHHHHHHEEEEEEEEECSCC
T ss_pred hhccCCCCCEEEECCC-----C-HHHHHHHHHHhccCCEEEEEecc
Confidence 22347999985422 1 34688899999999999886543
No 331
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=95.25 E-value=0.086 Score=45.50 Aligned_cols=107 Identities=17% Similarity=0.214 Sum_probs=69.8
Q ss_pred CCeEEEEcCCcCHHHHHHHHh-------CCCCeEEEEe-----CCH----------------------HHHHHHHH---H
Q 019957 167 GGLLVDVSCGSGLFSRKFAKS-------GTYSGVVALD-----FSE----------------------NMLRQCYD---F 209 (333)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~-------~~~~~v~g~D-----~s~----------------------~~~~~a~~---~ 209 (333)
++.|+|+|+-.|..+..++.. ++..+++++| +.+ +.++...+ +
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 459999999999877775542 3456899999 321 11111111 1
Q ss_pred HHhcCcCCCCCeEEEEccCCC-CC-----CCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEec
Q 019957 210 IKQDNTILTSNLALVRADVCR-LP-----FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 210 ~~~~~~~~~~~i~~~~~d~~~-lp-----~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
.+..+. ...++.++.|++.+ +| .+..+||+|+.-.-. ...-...++.+...|+|||++++-+.+
T Consensus 150 ~~~~g~-~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~--Y~~t~~~le~~~p~l~~GGvIv~DD~~ 219 (257)
T 3tos_A 150 SDFFGH-VTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL--YEPTKAVLEAIRPYLTKGSIVAFDELD 219 (257)
T ss_dssp TSTTTT-SCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC--HHHHHHHHHHHGGGEEEEEEEEESSTT
T ss_pred hhhcCC-CCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc--cchHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 112232 13789999999965 33 234579999986632 223356788999999999999997653
No 332
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.23 E-value=0.087 Score=47.69 Aligned_cols=100 Identities=15% Similarity=0.135 Sum_probs=65.6
Q ss_pred hhcccCCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEcc---CCC----CC
Q 019957 161 YFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRAD---VCR----LP 232 (333)
Q Consensus 161 ~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d---~~~----lp 232 (333)
.....++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++. | .. .++..+ ..+ +.
T Consensus 166 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----G----a~-~vi~~~~~~~~~~~~~i~ 236 (356)
T 1pl8_A 166 RGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEI----G----AD-LVLQISKESPQEIARKVE 236 (356)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----T----CS-EEEECSSCCHHHHHHHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----C----CC-EEEcCcccccchHHHHHH
Confidence 34566788999999986 88888888875333899999999888887652 1 11 222211 001 10
Q ss_pred -CCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 233 -FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 233 -~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
...+.+|+|+-.-. . ...+....+.|++||++++...
T Consensus 237 ~~~~~g~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 237 GQLGCKPEVTIECTG-----A-EASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp HHHTSCCSEEEECSC-----C-HHHHHHHHHHSCTTCEEEECSC
T ss_pred HHhCCCCCEEEECCC-----C-hHHHHHHHHHhcCCCEEEEEec
Confidence 00146899875432 2 3457888999999999987653
No 333
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.19 E-value=0.045 Score=49.04 Aligned_cols=62 Identities=10% Similarity=0.068 Sum_probs=50.9
Q ss_pred CCcHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc
Q 019957 149 PGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD 213 (333)
Q Consensus 149 ~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~ 213 (333)
+.+..+++.+..... .++..|||.-||+|..+....+.+. +++|+|+++...+.+++++...
T Consensus 236 ~kp~~l~~~~i~~~~-~~~~~VlDpF~GsGtt~~aa~~~gr--~~ig~e~~~~~~~~~~~r~~~~ 297 (323)
T 1boo_A 236 RFPAKLPEFFIRMLT-EPDDLVVDIFGGSNTTGLVAERESR--KWISFEMKPEYVAASAFRFLDN 297 (323)
T ss_dssp CCCTHHHHHHHHHHC-CTTCEEEETTCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHGGGSCS
T ss_pred cCCHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCC--CEEEEeCCHHHHHHHHHHHHhc
Confidence 445666766666553 4678999999999999999998876 9999999999999999987654
No 334
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=95.19 E-value=0.046 Score=54.09 Aligned_cols=126 Identities=16% Similarity=0.096 Sum_probs=78.4
Q ss_pred CCeEEEEcCCcCHHHHHHHHhC-------C-----CCeEEEEeC---CHHHHHHHHH-----------HHHhcCcC----
Q 019957 167 GGLLVDVSCGSGLFSRKFAKSG-------T-----YSGVVALDF---SENMLRQCYD-----------FIKQDNTI---- 216 (333)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~~-------~-----~~~v~g~D~---s~~~~~~a~~-----------~~~~~~~~---- 216 (333)
.-+|||+|-|+|.+.....+.. | ...++++|. +.+.+..+-. ........
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 4589999999998766554331 1 135899998 7776664332 11111100
Q ss_pred -------CCCCeEEEEccCCC-CC-CC---CCCcceEEeccccccCCCh----HHHHHHHHHhccCCcEEEEEEecccCC
Q 019957 217 -------LTSNLALVRADVCR-LP-FA---SGFVDAVHAGAALHCWPSP----SNAVAEISRILRSGGVFVGTTFLRYTS 280 (333)
Q Consensus 217 -------~~~~i~~~~~d~~~-lp-~~---~~~fD~V~~~~vl~h~~d~----~~~l~~~~r~LkpgG~l~i~~~~~~~~ 280 (333)
....+++..+|+.+ ++ +. +..||+|+....- .-.+| ..+++.+.++++|||.+....
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~-p~~np~~w~~~~~~~l~~~~~~g~~~~t~~------ 219 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFA-PAKNPDMWTQNLFNAMARLARPGGTLATFT------ 219 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSC-GGGCGGGSCHHHHHHHHHHEEEEEEEEESC------
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCC-CcCChhhhhHHHHHHHHHHhCCCCEEEecc------
Confidence 01235566777743 22 11 4679999885421 11233 578999999999999876422
Q ss_pred CcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCCcEEEE
Q 019957 281 STSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTS 319 (333)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf~~v~~ 319 (333)
....+++.+.++||.+.+.
T Consensus 220 --------------------~~~~vr~~L~~aGf~v~~~ 238 (676)
T 3ps9_A 220 --------------------SAGFVRRGLQDAGFTMQKR 238 (676)
T ss_dssp --------------------CCHHHHHHHHHHTCEEEEE
T ss_pred --------------------CcHHHHHHHHhCCeEEEec
Confidence 1146788899999987653
No 335
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.15 E-value=0.066 Score=48.38 Aligned_cols=101 Identities=13% Similarity=0.164 Sum_probs=66.9
Q ss_pred HhhcccCCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC------
Q 019957 160 EYFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------ 232 (333)
Q Consensus 160 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------ 232 (333)
+.....++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++. | . -.++..+-.++.
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----G----a-~~vi~~~~~~~~~~v~~~ 230 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY----G----A-TDIINYKNGDIVEQILKA 230 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH----T----C-CEEECGGGSCHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh----C----C-ceEEcCCCcCHHHHHHHH
Confidence 445566788999999886 88888888875333899999999888888763 1 1 122221111110
Q ss_pred CCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
.....+|+|+-... . ...+..+.+.|++||+++....
T Consensus 231 t~g~g~D~v~d~~g-----~-~~~~~~~~~~l~~~G~~v~~G~ 267 (352)
T 3fpc_A 231 TDGKGVDKVVIAGG-----D-VHTFAQAVKMIKPGSDIGNVNY 267 (352)
T ss_dssp TTTCCEEEEEECSS-----C-TTHHHHHHHHEEEEEEEEECCC
T ss_pred cCCCCCCEEEECCC-----C-hHHHHHHHHHHhcCCEEEEecc
Confidence 11236999985432 1 2357889999999999987653
No 336
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=95.15 E-value=0.42 Score=42.73 Aligned_cols=126 Identities=13% Similarity=0.085 Sum_probs=77.3
Q ss_pred CCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCC-CCCcceEEecc
Q 019957 167 GGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA-SGFVDAVHAGA 245 (333)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~-~~~fD~V~~~~ 245 (333)
+.++||+.||.|.+...+...|. ..+.++|+++.+++..+.+... . . .+|+.++... -..+|+|+...
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~-~~v~~~e~d~~a~~t~~~N~~~-----~---~--~~Di~~~~~~~~~~~D~l~~gp 79 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGA-ECVYSNEWDKYAQEVYEMNFGE-----K---P--EGDITQVNEKTIPDHDILCAGF 79 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTC-EEEEEECCCHHHHHHHHHHHSC-----C---C--BSCGGGSCGGGSCCCSEEEEEC
T ss_pred CCcEEEECCCcCHHHHHHHHCCC-eEEEEEeCCHHHHHHHHHHcCC-----C---C--cCCHHHcCHhhCCCCCEEEECC
Confidence 46899999999999999998873 4688999999999888887532 1 1 5777665321 23589999753
Q ss_pred ccccC---------CChH-HHHH---HHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhC
Q 019957 246 ALHCW---------PSPS-NAVA---EISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSC 312 (333)
Q Consensus 246 vl~h~---------~d~~-~~l~---~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~a 312 (333)
-...+ .|+. .++. ++.+.++|. +++.+..... .. +...-+.+.+...|++.
T Consensus 80 PCQ~fS~ag~~~g~~d~r~~L~~~~~r~i~~~~P~--~~~~ENV~gl------~~--------~~~~~~~~~i~~~l~~~ 143 (327)
T 2c7p_A 80 PCQAFSISGKQKGFEDSRGTLFFDIARIVREKKPK--VVFMENVKNF------AS--------HDNGNTLEVVKNTMNEL 143 (327)
T ss_dssp CCTTTCTTSCCCGGGSTTSCHHHHHHHHHHHHCCS--EEEEEEEGGG------GT--------GGGGHHHHHHHHHHHHT
T ss_pred CCCCcchhcccCCCcchhhHHHHHHHHHHHhccCc--EEEEeCcHHH------Hh--------ccccHHHHHHHHHHHhC
Confidence 32222 2332 1223 333445775 3343432210 00 00011246788889999
Q ss_pred CCcEEEE
Q 019957 313 GLTNYTS 319 (333)
Q Consensus 313 Gf~~v~~ 319 (333)
|+.+...
T Consensus 144 GY~v~~~ 150 (327)
T 2c7p_A 144 DYSFHAK 150 (327)
T ss_dssp TBCCEEE
T ss_pred CCEEEEE
Confidence 9976543
No 337
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.14 E-value=0.061 Score=48.09 Aligned_cols=62 Identities=18% Similarity=0.324 Sum_probs=49.7
Q ss_pred CCcHHHHHHHHHhhcccCCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCH---HHHHHHHHHHHhc
Q 019957 149 PGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSE---NMLRQCYDFIKQD 213 (333)
Q Consensus 149 ~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~---~~~~~a~~~~~~~ 213 (333)
+.+..+++.+..... .++..|||.-||+|..+....+.+. +++|+|+++ ...+.+++++...
T Consensus 226 ~kp~~l~~~~i~~~~-~~~~~vlDpF~GsGtt~~aa~~~~r--~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 226 QKPAAVIERLVRALS-HPGSTVLDFFAGSGVTARVAIQEGR--NSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp CCCHHHHHHHHHHHS-CTTCEEEETTCTTCHHHHHHHHHTC--EEEEEESSTHHHHHHHHHHHHC---
T ss_pred CCCHHHHHHHHHHhC-CCCCEEEecCCCCCHHHHHHHHcCC--cEEEEECCccHHHHHHHHHHHHHHc
Confidence 355667777766654 4678999999999999999999876 999999999 9999999987653
No 338
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.11 E-value=0.31 Score=44.07 Aligned_cols=104 Identities=13% Similarity=0.113 Sum_probs=68.5
Q ss_pred HhhcccCCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEc-----cCC-CC-
Q 019957 160 EYFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRA-----DVC-RL- 231 (333)
Q Consensus 160 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~-----d~~-~l- 231 (333)
+.....++.+||-+|+|. |.++..+++......|+++|.++..++.+++. .. .-+.+... |+. .+
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~------~~~~~~~~~~~~~~~~~~v~ 245 (363)
T 3m6i_A 173 QRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CP------EVVTHKVERLSAEESAKKIV 245 (363)
T ss_dssp HHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CT------TCEEEECCSCCHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-ch------hcccccccccchHHHHHHHH
Confidence 344566788999999976 88888888875233499999999999988875 21 12222211 110 00
Q ss_pred -CCCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEec
Q 019957 232 -PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 232 -p~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
......+|+|+-.-. . ...+..+.+.|++||++++....
T Consensus 246 ~~t~g~g~Dvvid~~g-----~-~~~~~~~~~~l~~~G~iv~~G~~ 285 (363)
T 3m6i_A 246 ESFGGIEPAVALECTG-----V-ESSIAAAIWAVKFGGKVFVIGVG 285 (363)
T ss_dssp HHTSSCCCSEEEECSC-----C-HHHHHHHHHHSCTTCEEEECCCC
T ss_pred HHhCCCCCCEEEECCC-----C-hHHHHHHHHHhcCCCEEEEEccC
Confidence 012347999985432 2 34578899999999999886543
No 339
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.03 E-value=0.08 Score=48.27 Aligned_cols=93 Identities=18% Similarity=0.212 Sum_probs=62.4
Q ss_pred cccCCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEc---c-CCCCCCCCCC
Q 019957 163 KSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRA---D-VCRLPFASGF 237 (333)
Q Consensus 163 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~---d-~~~lp~~~~~ 237 (333)
...++.+||-+|+|. |.++..+++.. +.+|+++|.++..++.+++. | . . .++.. + ...+ .+.
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~l----G---a-~-~vi~~~~~~~~~~~---~~g 257 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKAL----G---A-D-EVVNSRNADEMAAH---LKS 257 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHH----T---C-S-EEEETTCHHHHHTT---TTC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc----C---C-c-EEeccccHHHHHHh---hcC
Confidence 556788999999986 78888887764 44899999999888887752 1 1 1 12211 1 1111 147
Q ss_pred cceEEeccccccCCChHHHHHHHHHhccCCcEEEEEE
Q 019957 238 VDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 238 fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 274 (333)
+|+|+-...-. ..++.+.+.|+++|+++...
T Consensus 258 ~Dvvid~~g~~------~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 258 FDFILNTVAAP------HNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp EEEEEECCSSC------CCHHHHHTTEEEEEEEEECC
T ss_pred CCEEEECCCCH------HHHHHHHHHhccCCEEEEec
Confidence 99998543321 13677889999999988754
No 340
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.02 E-value=0.23 Score=44.68 Aligned_cols=99 Identities=16% Similarity=0.116 Sum_probs=64.8
Q ss_pred hhcccCCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccC-CCCC------
Q 019957 161 YFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV-CRLP------ 232 (333)
Q Consensus 161 ~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~-~~lp------ 232 (333)
.....++.+||-+|+|. |.++..+++.. +.+|+++|.++..++.+++. | .. .++..+- .+..
T Consensus 163 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l----G----a~-~~~~~~~~~~~~~~i~~~ 232 (352)
T 1e3j_A 163 RAGVQLGTTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKNC----G----AD-VTLVVDPAKEEESSIIER 232 (352)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHT----T----CS-EEEECCTTTSCHHHHHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHh----C----CC-EEEcCcccccHHHHHHHH
Confidence 34556788999999875 77777777764 34799999999988887652 2 11 2222110 1110
Q ss_pred CC---CCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 233 FA---SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 233 ~~---~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
.. .+.+|+|+-... . ...++...+.|+++|++++...
T Consensus 233 ~~~~~g~g~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 233 IRSAIGDLPNVTIDCSG-----N-EKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp HHHHSSSCCSEEEECSC-----C-HHHHHHHHHHSCTTCEEEECSC
T ss_pred hccccCCCCCEEEECCC-----C-HHHHHHHHHHHhcCCEEEEEec
Confidence 01 246999885432 1 3457888999999999987653
No 341
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=94.99 E-value=0.21 Score=44.80 Aligned_cols=95 Identities=22% Similarity=0.243 Sum_probs=62.9
Q ss_pred cccCCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCC------C
Q 019957 163 KSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA------S 235 (333)
Q Consensus 163 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~------~ 235 (333)
...++.+||-+|+|. |..+..+++.. +.+|+++|.++..++.+++. | . . .+ .|..+..+. .
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~l----G---a-~-~~--~d~~~~~~~~~~~~~~ 228 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKEL----G---A-D-LV--VNPLKEDAAKFMKEKV 228 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHT----T---C-S-EE--ECTTTSCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHC----C---C-C-EE--ecCCCccHHHHHHHHh
Confidence 456788999999864 77777777664 34999999999888877641 1 1 1 11 132211110 0
Q ss_pred CCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
+.+|+|+.... . ...++.+.+.|+++|++++...
T Consensus 229 ~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 229 GGVHAAVVTAV-----S-KPAFQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp SSEEEEEESSC-----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCCCEEEECCC-----C-HHHHHHHHHHhhcCCEEEEecc
Confidence 46898876432 1 3457888999999999887543
No 342
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=94.93 E-value=0.21 Score=45.11 Aligned_cols=90 Identities=13% Similarity=0.107 Sum_probs=59.5
Q ss_pred CeEEEEcCCc-CHHH-HHHH-HhCCCCe-EEEEeCCHH---HHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCC-----C
Q 019957 168 GLLVDVSCGS-GLFS-RKFA-KSGTYSG-VVALDFSEN---MLRQCYDFIKQDNTILTSNLALVRADVCRLPFA-----S 235 (333)
Q Consensus 168 ~~vLDiGcG~-G~~~-~~l~-~~~~~~~-v~g~D~s~~---~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~-----~ 235 (333)
.+||-+|+|. |.++ ..++ +.. +.+ |+++|.+++ .++.+++. +.+.+ |..+..+. .
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~~~~~~~~~~~~~~l----------Ga~~v--~~~~~~~~~i~~~~ 240 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGRRDRPDPTIDIIEEL----------DATYV--DSRQTPVEDVPDVY 240 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEECCCSSCHHHHHHHHT----------TCEEE--ETTTSCGGGHHHHS
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeCCcccHHHHHHHHHc----------CCccc--CCCccCHHHHHHhC
Confidence 8999999865 7777 7777 653 335 999999887 77777642 22333 33221111 2
Q ss_pred CCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEec
Q 019957 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
+.+|+|+-.-. . ...++.+.+.|+++|+++.....
T Consensus 241 gg~Dvvid~~g-----~-~~~~~~~~~~l~~~G~iv~~g~~ 275 (357)
T 2b5w_A 241 EQMDFIYEATG-----F-PKHAIQSVQALAPNGVGALLGVP 275 (357)
T ss_dssp CCEEEEEECSC-----C-HHHHHHHHHHEEEEEEEEECCCC
T ss_pred CCCCEEEECCC-----C-hHHHHHHHHHHhcCCEEEEEeCC
Confidence 36898875322 2 24578899999999999876543
No 343
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.70 E-value=0.11 Score=47.42 Aligned_cols=101 Identities=17% Similarity=0.159 Sum_probs=65.7
Q ss_pred HhhcccCCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEcc--CCCC-----
Q 019957 160 EYFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRAD--VCRL----- 231 (333)
Q Consensus 160 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d--~~~l----- 231 (333)
+.....++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++. | --.++... -.++
T Consensus 187 ~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~l----G-----a~~vi~~~~~~~~~~~~i~ 257 (378)
T 3uko_A 187 NTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKF----G-----VNEFVNPKDHDKPIQEVIV 257 (378)
T ss_dssp TTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTT----T-----CCEEECGGGCSSCHHHHHH
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc----C-----CcEEEccccCchhHHHHHH
Confidence 344556788999999975 88888888764234899999999888877652 1 11222211 0111
Q ss_pred CCCCCCcceEEeccccccCCChHHHHHHHHHhccCC-cEEEEEEe
Q 019957 232 PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSG-GVFVGTTF 275 (333)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~Lkpg-G~l~i~~~ 275 (333)
...++.+|+|+-... . ...++.+.+.|++| |++++...
T Consensus 258 ~~~~gg~D~vid~~g-----~-~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 258 DLTDGGVDYSFECIG-----N-VSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp HHTTSCBSEEEECSC-----C-HHHHHHHHHTBCTTTCEEEECSC
T ss_pred HhcCCCCCEEEECCC-----C-HHHHHHHHHHhhccCCEEEEEcc
Confidence 011347999985432 2 34588899999997 99988654
No 344
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=94.67 E-value=0.055 Score=48.09 Aligned_cols=93 Identities=10% Similarity=0.034 Sum_probs=61.0
Q ss_pred HhhcccCCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCc
Q 019957 160 EYFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFV 238 (333)
Q Consensus 160 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~f 238 (333)
+.....++.+||-+|+|. |.++..+++.. +.+|++++ ++..++.+++. +.+.+..|.+.+ .+.+
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~-~~~~~~~~~~l----------Ga~~v~~d~~~v---~~g~ 200 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNA-GYVVDLVS-ASLSQALAAKR----------GVRHLYREPSQV---TQKY 200 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHH-TCEEEEEC-SSCCHHHHHHH----------TEEEEESSGGGC---CSCE
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEE-ChhhHHHHHHc----------CCCEEEcCHHHh---CCCc
Confidence 344556789999999975 88888887764 34999999 88888887663 122222232233 4679
Q ss_pred ceEEeccccccCCChHHHHHHHHHhccCCcEEEEEE
Q 019957 239 DAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 239 D~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 274 (333)
|+|+-.-. . ..+....+.|+++|+++...
T Consensus 201 Dvv~d~~g-----~--~~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 201 FAIFDAVN-----S--QNAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp EEEECC--------------TTGGGEEEEEEEEEEC
T ss_pred cEEEECCC-----c--hhHHHHHHHhcCCCEEEEEe
Confidence 99985332 1 12356788999999998863
No 345
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=94.66 E-value=0.18 Score=44.99 Aligned_cols=96 Identities=18% Similarity=0.199 Sum_probs=63.1
Q ss_pred cccCCCeEEEEcC-C-cCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC------CC
Q 019957 163 KSAQGGLLVDVSC-G-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------FA 234 (333)
Q Consensus 163 ~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------~~ 234 (333)
...++.+||-+|+ | .|..+..+++.. +.+|+++|.++..++.+++. | .-..+..+-.++. ..
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~----g-----a~~~~~~~~~~~~~~~~~~~~ 214 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMK-GAHTIAVASTDEKLKIAKEY----G-----AEYLINASKEDILRQVLKFTN 214 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT----T-----CSEEEETTTSCHHHHHHHHTT
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc----C-----CcEEEeCCCchHHHHHHHHhC
Confidence 4567889999994 3 477777777764 44999999999888877652 1 1122222111110 11
Q ss_pred CCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 235 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
...+|+|+....- ..++.+.+.|++||++++...
T Consensus 215 ~~g~D~vid~~g~-------~~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 215 GKGVDASFDSVGK-------DTFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp TSCEEEEEECCGG-------GGHHHHHHHEEEEEEEEECCC
T ss_pred CCCceEEEECCCh-------HHHHHHHHHhccCCEEEEEcC
Confidence 3469999865432 347788899999999988643
No 346
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=94.55 E-value=0.19 Score=45.25 Aligned_cols=97 Identities=15% Similarity=0.181 Sum_probs=61.8
Q ss_pred hcccCCCeEEEEcCC--cCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-------
Q 019957 162 FKSAQGGLLVDVSCG--SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------- 232 (333)
Q Consensus 162 l~~~~~~~vLDiGcG--~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------- 232 (333)
....++.+||-+|+| .|..+..+++...+.+|+++|.++..++.+++. | .. .++ |..+..
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~----g----~~-~~~--~~~~~~~~~~~~~ 234 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA----G----AD-YVI--NASMQDPLAEIRR 234 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH----T----CS-EEE--ETTTSCHHHHHHH
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh----C----CC-EEe--cCCCccHHHHHHH
Confidence 445678899999998 466655555542123899999999888877652 1 11 122 221111
Q ss_pred CCC-CCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 233 FAS-GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 233 ~~~-~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
... +.+|+|+.... ....++.+.+.|+++|++++...
T Consensus 235 ~~~~~~~d~vi~~~g------~~~~~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 235 ITESKGVDAVIDLNN------SEKTLSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp HTTTSCEEEEEESCC------CHHHHTTGGGGEEEEEEEEECCS
T ss_pred HhcCCCceEEEECCC------CHHHHHHHHHHHhcCCEEEEECC
Confidence 111 47999886543 13457888899999999887543
No 347
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=94.53 E-value=0.13 Score=45.93 Aligned_cols=100 Identities=10% Similarity=-0.007 Sum_probs=64.4
Q ss_pred HhhcccCCCeEEEEcC--CcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-----
Q 019957 160 EYFKSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----- 232 (333)
Q Consensus 160 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp----- 232 (333)
+.....++.+||-+|+ |.|..+..+++.. +.+|+++|.++..++.+.+.+ | .-..+...-.++.
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~~---g-----~~~~~~~~~~~~~~~~~~ 213 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIARLK-GCRVVGIAGGAEKCRFLVEEL---G-----FDGAIDYKNEDLAAGLKR 213 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTT---C-----CSEEEETTTSCHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHc---C-----CCEEEECCCHHHHHHHHH
Confidence 4455677889999998 3477777777664 349999999998877773321 1 1112211111110
Q ss_pred CCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
...+.+|+|+.... ...+..+.+.|++||++++...
T Consensus 214 ~~~~~~d~vi~~~g-------~~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 214 ECPKGIDVFFDNVG-------GEILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp HCTTCEEEEEESSC-------HHHHHHHHTTEEEEEEEEECCC
T ss_pred hcCCCceEEEECCC-------cchHHHHHHHHhhCCEEEEEee
Confidence 11246999886443 2368889999999999988643
No 348
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=94.48 E-value=0.011 Score=41.47 Aligned_cols=31 Identities=23% Similarity=0.623 Sum_probs=23.6
Q ss_pred CeecccCCCccccccCCCCccccccccCceeeCCCCcccc
Q 019957 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYS 98 (333)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~ 98 (333)
..+.||.||..+..... .+.+.|+.|++.|.
T Consensus 26 ~~y~Cp~CG~~~v~r~a---------tGiW~C~~Cg~~~a 56 (83)
T 1vq8_Z 26 EDHACPNCGEDRVDRQG---------TGIWQCSYCDYKFT 56 (83)
T ss_dssp SCEECSSSCCEEEEEEE---------TTEEEETTTCCEEE
T ss_pred ccCcCCCCCCcceeccC---------CCeEECCCCCCEec
Confidence 46789999997654332 37999999998863
No 349
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.47 E-value=1.3 Score=43.83 Aligned_cols=162 Identities=12% Similarity=0.154 Sum_probs=92.5
Q ss_pred HHHHHhhccc---CCCeEEEEcCCcCHHHHHHHHhCC--------CCeEEEEeCCHHHHHHHHHHHHhcC----------
Q 019957 156 KMAQEYFKSA---QGGLLVDVSCGSGLFSRKFAKSGT--------YSGVVALDFSENMLRQCYDFIKQDN---------- 214 (333)
Q Consensus 156 ~~~~~~l~~~---~~~~vLDiGcG~G~~~~~l~~~~~--------~~~v~g~D~s~~~~~~a~~~~~~~~---------- 214 (333)
..+.+++... +...|+-+|||.=.....+....+ ...++=+|. ++.++.=++.+...+
T Consensus 94 ~~v~~fl~~~~~~~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~-p~v~~~K~~~l~~~~~l~~~~~~~~ 172 (695)
T 2zwa_A 94 SRLNSIIEQTPQDKKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDY-SDLLKIKIELIKTIPELSKIIGLSE 172 (695)
T ss_dssp HHHHHHHHHSCTTSEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEEC-HHHHHHHHHHHHHCHHHHHHTTCCS
T ss_pred HHHHHHHhcccCCCCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECcc-HHHHHHHHHHHHcChHHHHhhcccc
Confidence 3444444433 356799999999888888876533 234455554 333333333343111
Q ss_pred ---cC--------CCCCeEEEEccCCCCC----------C-CCCCcceEEeccccccCCCh--HHHHHHHHHhccCCcEE
Q 019957 215 ---TI--------LTSNLALVRADVCRLP----------F-ASGFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVF 270 (333)
Q Consensus 215 ---~~--------~~~~i~~~~~d~~~lp----------~-~~~~fD~V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l 270 (333)
.. ...+..++.+|+.+.. + ....-=++++-.+|.+++.. .++|+.+.+ + ++|.+
T Consensus 173 ~~~~~~~~~~~~~~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~-~-~~~~~ 250 (695)
T 2zwa_A 173 DKDYVDDSNVDFLTTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSK-M-ENSHF 250 (695)
T ss_dssp SCSSCSCTTCCCEECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHT-S-SSEEE
T ss_pred ccccccccccccccCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhh-C-CCceE
Confidence 00 0137889999997641 1 22223356677778887543 467777775 4 67777
Q ss_pred EEEEecccCCCcchhhHHHHHhh-------hccCCCCCHHHHHHHHHhCCCcEEEEE
Q 019957 271 VGTTFLRYTSSTSLTGRVLRERI-------LQNYNYLTEEEIEDLCTSCGLTNYTSK 320 (333)
Q Consensus 271 ~i~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~t~~~l~~ll~~aGf~~v~~~ 320 (333)
++.+...+......+++...... .....+.+.++..+.|.++||+.+...
T Consensus 251 ~~~e~~~~~~~~d~f~~~m~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~Gw~~v~~~ 307 (695)
T 2zwa_A 251 IILEQLIPKGPFEPFSKQMLAHFKRNDSPLQSVLKYNTIESQVQRFNKLGFAYVNVG 307 (695)
T ss_dssp EEEEECCTTCTTSHHHHHHHHHHHHTTCCCCGGGTCCSHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEeecCCCCCChHHHHHHHHHHHcCCCCCccccCCCHHHHHHHHHHCCCCCccee
Confidence 77665543222222233222211 133456789999999999999876643
No 350
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.42 E-value=0.18 Score=44.95 Aligned_cols=95 Identities=11% Similarity=-0.004 Sum_probs=61.7
Q ss_pred hhcccCCCeEEEEcC--CcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC-CC-----
Q 019957 161 YFKSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LP----- 232 (333)
Q Consensus 161 ~l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-lp----- 232 (333)
.....++.+||-.|+ |.|..+..+++.. +.+|+++|.++..++.+++. + .. .. .|..+ ..
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~~----g----~~-~~--~d~~~~~~~~~~~ 207 (333)
T 1v3u_A 140 VCGVKGGETVLVSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLKQI----G----FD-AA--FNYKTVNSLEEAL 207 (333)
T ss_dssp TSCCCSSCEEEEESTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT----T----CS-EE--EETTSCSCHHHHH
T ss_pred hhCCCCCCEEEEecCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhc----C----Cc-EE--EecCCHHHHHHHH
Confidence 344567889999998 4577666666553 34999999998888777431 1 11 11 23322 11
Q ss_pred --CCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEE
Q 019957 233 --FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 233 --~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 274 (333)
...+.+|+|+.+.. ...++...+.|++||++++..
T Consensus 208 ~~~~~~~~d~vi~~~g-------~~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 208 KKASPDGYDCYFDNVG-------GEFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp HHHCTTCEEEEEESSC-------HHHHHHHHTTEEEEEEEEECC
T ss_pred HHHhCCCCeEEEECCC-------hHHHHHHHHHHhcCCEEEEEe
Confidence 11246999886554 234788889999999998764
No 351
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=94.38 E-value=0.17 Score=45.95 Aligned_cols=100 Identities=14% Similarity=0.107 Sum_probs=64.6
Q ss_pred hhcccCCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccC--CCC-----C
Q 019957 161 YFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV--CRL-----P 232 (333)
Q Consensus 161 ~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~--~~l-----p 232 (333)
.....++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++. | --.++..+- .++ .
T Consensus 186 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----G-----a~~vi~~~~~~~~~~~~i~~ 256 (373)
T 1p0f_A 186 TAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIEL----G-----ATECLNPKDYDKPIYEVICE 256 (373)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHT----T-----CSEEECGGGCSSCHHHHHHH
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc----C-----CcEEEecccccchHHHHHHH
Confidence 34556788999999876 78888887764233799999999888877652 1 112222110 111 0
Q ss_pred CCCCCcceEEeccccccCCChHHHHHHHHHhccCC-cEEEEEEe
Q 019957 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSG-GVFVGTTF 275 (333)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~Lkpg-G~l~i~~~ 275 (333)
...+.+|+|+-.-. . ...++.+.+.|+++ |++++...
T Consensus 257 ~t~gg~Dvvid~~g-----~-~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 257 KTNGGVDYAVECAG-----R-IETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp HTTSCBSEEEECSC-----C-HHHHHHHHHTBCTTTCEEEECCC
T ss_pred HhCCCCCEEEECCC-----C-HHHHHHHHHHHhcCCCEEEEEcc
Confidence 11237999885432 1 34588899999999 99887643
No 352
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=94.38 E-value=0.17 Score=45.94 Aligned_cols=92 Identities=16% Similarity=0.170 Sum_probs=61.8
Q ss_pred CCCeEEEEc-CCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC-----CCCCCCc
Q 019957 166 QGGLLVDVS-CGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-----PFASGFV 238 (333)
Q Consensus 166 ~~~~vLDiG-cG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-----p~~~~~f 238 (333)
++.+||=+| +|. |.++..+++.....+|+++|.++..++.+++. | --.++... .++ ....+.+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~l----G-----ad~vi~~~-~~~~~~v~~~~~~g~ 240 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSL----G-----AHHVIDHS-KPLAAEVAALGLGAP 240 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHT----T-----CSEEECTT-SCHHHHHHTTCSCCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHc----C-----CCEEEeCC-CCHHHHHHHhcCCCc
Confidence 577899998 554 88888888862245999999999888887652 1 11122111 111 1123579
Q ss_pred ceEEeccccccCCChHHHHHHHHHhccCCcEEEEE
Q 019957 239 DAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGT 273 (333)
Q Consensus 239 D~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~ 273 (333)
|+|+-... -...+..+.+.|+++|++++.
T Consensus 241 Dvvid~~g------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 241 AFVFSTTH------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEEECSC------HHHHHHHHHHHSCTTCEEEEC
T ss_pred eEEEECCC------chhhHHHHHHHhcCCCEEEEE
Confidence 98885432 234688899999999999876
No 353
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=94.32 E-value=0.44 Score=42.61 Aligned_cols=102 Identities=16% Similarity=0.160 Sum_probs=65.2
Q ss_pred HhhcccCCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC------
Q 019957 160 EYFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------ 232 (333)
Q Consensus 160 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------ 232 (333)
......++.+||=+|+|. |.++..+++......++++|.++..++.+++. .-...+...-.+.+
T Consensus 154 ~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~l---------Ga~~~i~~~~~~~~~~~~~~ 224 (346)
T 4a2c_A 154 HLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSF---------GAMQTFNSSEMSAPQMQSVL 224 (346)
T ss_dssp HHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---------TCSEEEETTTSCHHHHHHHH
T ss_pred HHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHc---------CCeEEEeCCCCCHHHHHHhh
Confidence 334556788999999986 66777777764345679999999988888762 12223322211111
Q ss_pred CCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEec
Q 019957 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
.....+|+|+.... . ...++...+.|++||.+++....
T Consensus 225 ~~~~g~d~v~d~~G-----~-~~~~~~~~~~l~~~G~~v~~g~~ 262 (346)
T 4a2c_A 225 RELRFNQLILETAG-----V-PQTVELAVEIAGPHAQLALVGTL 262 (346)
T ss_dssp GGGCSSEEEEECSC-----S-HHHHHHHHHHCCTTCEEEECCCC
T ss_pred cccCCccccccccc-----c-cchhhhhhheecCCeEEEEEecc
Confidence 11245777764321 2 34578889999999999886543
No 354
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.32 E-value=0.1 Score=46.83 Aligned_cols=99 Identities=14% Similarity=0.150 Sum_probs=62.5
Q ss_pred HhhcccCCCeEEEEcCC--cCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-----
Q 019957 160 EYFKSAQGGLLVDVSCG--SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----- 232 (333)
Q Consensus 160 ~~l~~~~~~~vLDiGcG--~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp----- 232 (333)
+.....++.+||-+|+| .|..+..+++.. +.+|+++|.++..++.+++. | .. ..+...-.++.
T Consensus 138 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~l----g----a~-~~~~~~~~~~~~~~~~ 207 (340)
T 3gms_A 138 ETLNLQRNDVLLVNACGSAIGHLFAQLSQIL-NFRLIAVTRNNKHTEELLRL----G----AA-YVIDTSTAPLYETVME 207 (340)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHH----T----CS-EEEETTTSCHHHHHHH
T ss_pred HhcccCCCCEEEEeCCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhC----C----Cc-EEEeCCcccHHHHHHH
Confidence 34456678899999987 477777777653 34999999998888877763 1 11 12221111110
Q ss_pred -CCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 233 -FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 233 -~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
.....+|+|+-...- ..+.+..+.|++||++++...
T Consensus 208 ~~~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 208 LTNGIGADAAIDSIGG-------PDGNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp HTTTSCEEEEEESSCH-------HHHHHHHHTEEEEEEEEECCC
T ss_pred HhCCCCCcEEEECCCC-------hhHHHHHHHhcCCCEEEEEee
Confidence 112479999864431 123445589999999988654
No 355
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=94.31 E-value=0.24 Score=45.03 Aligned_cols=99 Identities=15% Similarity=0.132 Sum_probs=64.1
Q ss_pred hhcccCCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccC--CCCC-----
Q 019957 161 YFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV--CRLP----- 232 (333)
Q Consensus 161 ~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~--~~lp----- 232 (333)
.....++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++. | --.++..+- .++.
T Consensus 186 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----G-----a~~vi~~~~~~~~~~~~~~~ 256 (374)
T 2jhf_A 186 VAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV----G-----ATECVNPQDYKKPIQEVLTE 256 (374)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----T-----CSEEECGGGCSSCHHHHHHH
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh----C-----CceEecccccchhHHHHHHH
Confidence 34556788999999876 78888888775233799999999888877652 1 111221110 1110
Q ss_pred CCCCCcceEEeccccccCCChHHHHHHHHHhccCC-cEEEEEE
Q 019957 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSG-GVFVGTT 274 (333)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~Lkpg-G~l~i~~ 274 (333)
..++.+|+|+-.-. . ...++...+.|+++ |++++..
T Consensus 257 ~~~~g~D~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 257 MSNGGVDFSFEVIG-----R-LDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp HTTSCBSEEEECSC-----C-HHHHHHHHHHBCTTTCEEEECS
T ss_pred HhCCCCcEEEECCC-----C-HHHHHHHHHHhhcCCcEEEEec
Confidence 11236899875432 2 34578889999999 9988754
No 356
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=94.26 E-value=0.27 Score=44.69 Aligned_cols=100 Identities=17% Similarity=0.168 Sum_probs=64.6
Q ss_pred hhcccCCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccC--CCCC-----
Q 019957 161 YFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV--CRLP----- 232 (333)
Q Consensus 161 ~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~--~~lp----- 232 (333)
.....++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++. | --.++...- .++.
T Consensus 187 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----G-----a~~vi~~~~~~~~~~~~~~~ 257 (374)
T 1cdo_A 187 TAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF----G-----ATDFVNPNDHSEPISQVLSK 257 (374)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----T-----CCEEECGGGCSSCHHHHHHH
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh----C-----CceEEeccccchhHHHHHHH
Confidence 34456788999999875 78888888775233799999999888877652 1 111221110 1110
Q ss_pred CCCCCcceEEeccccccCCChHHHHHHHHHhccCC-cEEEEEEe
Q 019957 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSG-GVFVGTTF 275 (333)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~Lkpg-G~l~i~~~ 275 (333)
...+.+|+|+-.-. . ...++.+.+.|+++ |++++...
T Consensus 258 ~~~~g~D~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 258 MTNGGVDFSLECVG-----N-VGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp HHTSCBSEEEECSC-----C-HHHHHHHHHTBCTTTCEEEECSC
T ss_pred HhCCCCCEEEECCC-----C-HHHHHHHHHHhhcCCcEEEEEcC
Confidence 11236899875432 1 34588899999999 99887643
No 357
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.18 E-value=0.088 Score=46.47 Aligned_cols=92 Identities=17% Similarity=0.161 Sum_probs=54.5
Q ss_pred CCeEEEEccCCC-CC-CCCCCcceEEeccccccCC--------------------ChHHHHHHHHHhccCCcEEEEEEec
Q 019957 219 SNLALVRADVCR-LP-FASGFVDAVHAGAALHCWP--------------------SPSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 219 ~~i~~~~~d~~~-lp-~~~~~fD~V~~~~vl~h~~--------------------d~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
.++.++++|..+ ++ +++++||+|+++--..... ....+++++.++|||||.+++....
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d 99 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGD 99 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECC
Confidence 457889999866 32 4578999999853332110 1235678999999999999887643
Q ss_pred ccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCCcEEEE
Q 019957 277 RYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTS 319 (333)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf~~v~~ 319 (333)
...... . ...+..+.-..++..+++++||.....
T Consensus 100 ~~~~~~-----~----~g~~~~~~~~~~l~~~~~~~Gf~~~~~ 133 (297)
T 2zig_A 100 VAVARR-----R----FGRHLVFPLHADIQVRCRKLGFDNLNP 133 (297)
T ss_dssp EEEECC-------------EEEECHHHHHHHHHHHTTCEEEEE
T ss_pred Cccccc-----c----CCcccccccHHHHHHHHHHcCCeeecc
Confidence 210000 0 000000111356778899999976553
No 358
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=94.17 E-value=0.17 Score=45.12 Aligned_cols=98 Identities=10% Similarity=0.062 Sum_probs=63.6
Q ss_pred hcccCCCeEEEEc-CC-cCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC------C
Q 019957 162 FKSAQGGLLVDVS-CG-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------F 233 (333)
Q Consensus 162 l~~~~~~~vLDiG-cG-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------~ 233 (333)
....++.+||-+| +| .|..+..+++.. +.+|+++|.++..++.+++. ... ..+..+-.++. .
T Consensus 136 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~--------Ga~-~~~~~~~~~~~~~~~~~~ 205 (325)
T 3jyn_A 136 YQVKPGEIILFHAAAGGVGSLACQWAKAL-GAKLIGTVSSPEKAAHAKAL--------GAW-ETIDYSHEDVAKRVLELT 205 (325)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHH--------TCS-EEEETTTSCHHHHHHHHT
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc--------CCC-EEEeCCCccHHHHHHHHh
Confidence 3456788999999 34 477777777653 34999999999988888753 111 12221111110 1
Q ss_pred CCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEec
Q 019957 234 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
....+|+|+....- ..+....+.|++||++++....
T Consensus 206 ~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~g~~ 241 (325)
T 3jyn_A 206 DGKKCPVVYDGVGQ-------DTWLTSLDSVAPRGLVVSFGNA 241 (325)
T ss_dssp TTCCEEEEEESSCG-------GGHHHHHTTEEEEEEEEECCCT
T ss_pred CCCCceEEEECCCh-------HHHHHHHHHhcCCCEEEEEecC
Confidence 23479999865432 3477888999999999887543
No 359
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=94.17 E-value=0.27 Score=44.67 Aligned_cols=100 Identities=15% Similarity=0.101 Sum_probs=64.6
Q ss_pred hhcccCCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccC--CCCC-----
Q 019957 161 YFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV--CRLP----- 232 (333)
Q Consensus 161 ~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~--~~lp----- 232 (333)
.....++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++. | --.++...- .++.
T Consensus 190 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----G-----a~~vi~~~~~~~~~~~~v~~ 260 (376)
T 1e3i_A 190 TAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL----G-----ATDCLNPRELDKPVQDVITE 260 (376)
T ss_dssp TSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----T-----CSEEECGGGCSSCHHHHHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh----C-----CcEEEccccccchHHHHHHH
Confidence 34456788999999875 78888888875333799999999888877652 1 111221110 1110
Q ss_pred CCCCCcceEEeccccccCCChHHHHHHHHHhccCC-cEEEEEEe
Q 019957 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSG-GVFVGTTF 275 (333)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~Lkpg-G~l~i~~~ 275 (333)
...+.+|+|+-.-. . ...++.+.+.|++| |++++...
T Consensus 261 ~~~~g~Dvvid~~G-----~-~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 261 LTAGGVDYSLDCAG-----T-AQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp HHTSCBSEEEESSC-----C-HHHHHHHHHTBCTTTCEEEECCC
T ss_pred HhCCCccEEEECCC-----C-HHHHHHHHHHhhcCCCEEEEECC
Confidence 11236899875432 2 34588899999999 99987543
No 360
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=94.12 E-value=0.22 Score=44.71 Aligned_cols=97 Identities=13% Similarity=0.179 Sum_probs=65.1
Q ss_pred cccCCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-----C-CC
Q 019957 163 KSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----F-AS 235 (333)
Q Consensus 163 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~-~~ 235 (333)
...++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++. | --.++..+- +.. . ..
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~l----G-----a~~~i~~~~-~~~~~v~~~t~g 237 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREV----G-----ADAAVKSGA-GAADAIRELTGG 237 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHT----T-----CSEEEECST-THHHHHHHHHGG
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc----C-----CCEEEcCCC-cHHHHHHHHhCC
Confidence 456788999999976 88888888763245999999999988888762 1 112222111 110 0 12
Q ss_pred CCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
..+|+|+-.-. . ...++.+.+.|+++|++++...
T Consensus 238 ~g~d~v~d~~G-----~-~~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 238 QGATAVFDFVG-----A-QSTIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp GCEEEEEESSC-----C-HHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCeEEEECCC-----C-HHHHHHHHHHHhcCCEEEEECC
Confidence 36898875332 2 3468899999999999988654
No 361
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.10 E-value=0.29 Score=45.07 Aligned_cols=100 Identities=12% Similarity=0.007 Sum_probs=64.1
Q ss_pred cccCCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC------CCC
Q 019957 163 KSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------FAS 235 (333)
Q Consensus 163 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------~~~ 235 (333)
...++.+||=+|+|. |.++..+++.....+|+++|.++..++.+++. | --.++..+-.++. ...
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l----G-----a~~vi~~~~~~~~~~i~~~t~g 280 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL----G-----ADHVIDPTKENFVEAVLDYTNG 280 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----T-----CSEEECTTTSCHHHHHHHHTTT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----C-----CCEEEcCCCCCHHHHHHHHhCC
Confidence 356788999999876 78888888875334899999999988888763 1 1112211111110 112
Q ss_pred CCcceEEeccccccCCChHHHHHHHHHhc----cCCcEEEEEEec
Q 019957 236 GFVDAVHAGAALHCWPSPSNAVAEISRIL----RSGGVFVGTTFL 276 (333)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~~~r~L----kpgG~l~i~~~~ 276 (333)
..+|+|+-. +..+...+..+.+.| ++||++++....
T Consensus 281 ~g~D~vid~-----~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~ 320 (404)
T 3ip1_A 281 LGAKLFLEA-----TGVPQLVWPQIEEVIWRARGINATVAIVARA 320 (404)
T ss_dssp CCCSEEEEC-----SSCHHHHHHHHHHHHHHCSCCCCEEEECSCC
T ss_pred CCCCEEEEC-----CCCcHHHHHHHHHHHHhccCCCcEEEEeCCC
Confidence 369998743 334444556666666 999999886543
No 362
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.04 E-value=0.18 Score=45.36 Aligned_cols=96 Identities=8% Similarity=0.117 Sum_probs=62.7
Q ss_pred cccCCCeEEEEcCCc-CHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEc----cC-CCCCCCC
Q 019957 163 KSAQGGLLVDVSCGS-GLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRA----DV-CRLPFAS 235 (333)
Q Consensus 163 ~~~~~~~vLDiGcG~-G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~----d~-~~lp~~~ 235 (333)
.. ++.+||-+|+|. |.++..+++.. ++.+|+++|.++..++.+++. | .. .++.. +. ..+. ..
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~l----G----a~-~vi~~~~~~~~~~~~~-~g 236 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALEL----G----AD-YVSEMKDAESLINKLT-DG 236 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH----T----CS-EEECHHHHHHHHHHHH-TT
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHh----C----CC-EEeccccchHHHHHhh-cC
Confidence 45 788999999975 77777777653 234899999999988888763 1 11 12211 11 1111 12
Q ss_pred CCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
..+|+|+-.-. . ...++.+.+.|+++|++++...
T Consensus 237 ~g~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 237 LGASIAIDLVG-----T-EETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp CCEEEEEESSC-----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCccEEEECCC-----C-hHHHHHHHHHhhcCCEEEEeCC
Confidence 36999986432 1 3358889999999999887643
No 363
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=93.99 E-value=0.023 Score=35.77 Aligned_cols=35 Identities=20% Similarity=0.324 Sum_probs=24.1
Q ss_pred ccccCeecccCCCccccccCCCCccccccccCceeeCCCCcccc
Q 019957 55 ELEGDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYS 98 (333)
Q Consensus 55 ~~~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~ 98 (333)
.++...--||.||+.+..... .+.+.|..||..+.
T Consensus 14 kv~~~~k~CP~CG~~~fm~~~---------~~R~~C~kCG~t~~ 48 (50)
T 3j20_Y 14 KVIRKNKFCPRCGPGVFMADH---------GDRWACGKCGYTEW 48 (50)
T ss_dssp CEECSSEECSSSCSSCEEEEC---------SSEEECSSSCCEEE
T ss_pred EEEEecccCCCCCCceEEecC---------CCeEECCCCCCEEE
Confidence 455556679999986533321 15899999998764
No 364
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=93.87 E-value=0.21 Score=45.38 Aligned_cols=99 Identities=16% Similarity=0.179 Sum_probs=64.1
Q ss_pred hhcccCCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccC--CCC-----C
Q 019957 161 YFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV--CRL-----P 232 (333)
Q Consensus 161 ~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~--~~l-----p 232 (333)
.....++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++. | -. .++...- .++ .
T Consensus 185 ~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l----G----a~-~vi~~~~~~~~~~~~v~~ 255 (373)
T 2fzw_A 185 TAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF----G----AT-ECINPQDFSKPIQEVLIE 255 (373)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH----T----CS-EEECGGGCSSCHHHHHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc----C----Cc-eEeccccccccHHHHHHH
Confidence 34556788999999876 77777777764233799999999888887753 1 11 1221110 111 0
Q ss_pred CCCCCcceEEeccccccCCChHHHHHHHHHhccCC-cEEEEEE
Q 019957 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSG-GVFVGTT 274 (333)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~Lkpg-G~l~i~~ 274 (333)
...+.+|+|+-... . ...++.+.+.|+++ |++++..
T Consensus 256 ~~~~g~D~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 256 MTDGGVDYSFECIG-----N-VKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp HTTSCBSEEEECSC-----C-HHHHHHHHHTBCTTTCEEEECS
T ss_pred HhCCCCCEEEECCC-----c-HHHHHHHHHhhccCCcEEEEEe
Confidence 11236899875432 1 34588899999999 9998764
No 365
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=93.77 E-value=0.29 Score=43.99 Aligned_cols=98 Identities=12% Similarity=0.016 Sum_probs=63.3
Q ss_pred hcccCCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC------CC
Q 019957 162 FKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------FA 234 (333)
Q Consensus 162 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------~~ 234 (333)
... ++.+||-+|+|. |..+..+++.....+|+++|.++..++.+++. | . -.++..+-.++. ..
T Consensus 164 ~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~----G----a-~~~~~~~~~~~~~~v~~~~~ 233 (348)
T 2d8a_A 164 GPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV----G----A-DYVINPFEEDVVKEVMDITD 233 (348)
T ss_dssp SCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH----T----C-SEEECTTTSCHHHHHHHHTT
T ss_pred cCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----C----C-CEEECCCCcCHHHHHHHHcC
Confidence 345 788999999975 77777777765223899999999888877653 1 1 112211111110 01
Q ss_pred CCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 235 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
...+|+|+.... . ...++.+.+.|+++|+++....
T Consensus 234 g~g~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 234 GNGVDVFLEFSG-----A-PKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp TSCEEEEEECSC-----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCCCCEEEECCC-----C-HHHHHHHHHHHhcCCEEEEEcc
Confidence 236999886432 1 3457888999999999887654
No 366
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=93.71 E-value=0.13 Score=45.31 Aligned_cols=71 Identities=14% Similarity=0.027 Sum_probs=54.1
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCC----CCCcce
Q 019957 166 QGGLLVDVSCGSGLFSRKFAKSGTYSG-VVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA----SGFVDA 240 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~-v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~----~~~fD~ 240 (333)
...++||+-||.|.+...+...|.... +.++|+++.+.+..+.+ .+...++.+|+.++... .+.+|+
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N--------~~~~~~~~~DI~~i~~~~i~~~~~~Dl 86 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR--------HQGKIMYVGDVRSVTQKHIQEWGPFDL 86 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHH--------TTTCEEEECCGGGCCHHHHHHTCCCSE
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHh--------CCCCceeCCChHHccHHHhcccCCcCE
Confidence 356899999999999999999875433 69999999988776665 33456788999876421 136999
Q ss_pred EEec
Q 019957 241 VHAG 244 (333)
Q Consensus 241 V~~~ 244 (333)
++..
T Consensus 87 l~gg 90 (295)
T 2qrv_A 87 VIGG 90 (295)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9974
No 367
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=93.62 E-value=0.34 Score=43.68 Aligned_cols=94 Identities=12% Similarity=0.080 Sum_probs=61.4
Q ss_pred hcccCCCeEEEEcC--CcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-------
Q 019957 162 FKSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------- 232 (333)
Q Consensus 162 l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------- 232 (333)
....++.+||-.|+ |.|..+..+++.. +.+|+++|.+++.++.+++. | .. ..+ |..+..
T Consensus 166 ~~~~~g~~vlV~GasggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~----g----a~-~~~--d~~~~~~~~~~~~ 233 (351)
T 1yb5_A 166 ACVKAGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVLQN----G----AH-EVF--NHREVNYIDKIKK 233 (351)
T ss_dssp SCCCTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT----T----CS-EEE--ETTSTTHHHHHHH
T ss_pred hCCCCcCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHc----C----CC-EEE--eCCCchHHHHHHH
Confidence 34567889999997 3477766666653 34899999999887766542 1 11 122 222211
Q ss_pred -CCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEE
Q 019957 233 -FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 233 -~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 274 (333)
.....+|+|+.... ...+....+.|+++|++++..
T Consensus 234 ~~~~~~~D~vi~~~G-------~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 234 YVGEKGIDIIIEMLA-------NVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp HHCTTCEEEEEESCH-------HHHHHHHHHHEEEEEEEEECC
T ss_pred HcCCCCcEEEEECCC-------hHHHHHHHHhccCCCEEEEEe
Confidence 11236999986543 235778889999999998765
No 368
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=93.61 E-value=0.4 Score=43.38 Aligned_cols=99 Identities=14% Similarity=0.108 Sum_probs=64.3
Q ss_pred HhhcccCCCeEEEEc-C-CcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-----
Q 019957 160 EYFKSAQGGLLVDVS-C-GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----- 232 (333)
Q Consensus 160 ~~l~~~~~~~vLDiG-c-G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp----- 232 (333)
+.....++.+||-+| + |.|..+..+++.. +.+|+++|.+++.++.+++. | .. .++..+-.++.
T Consensus 157 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~----G----a~-~~~~~~~~~~~~~~~~ 226 (362)
T 2c0c_A 157 ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFLKSL----G----CD-RPINYKTEPVGTVLKQ 226 (362)
T ss_dssp HHTCCCTTCEEEETTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT----T----CS-EEEETTTSCHHHHHHH
T ss_pred HhcCCCCCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHc----C----Cc-EEEecCChhHHHHHHH
Confidence 334556788999999 3 4588887777764 34899999998888777652 1 11 12221111110
Q ss_pred CCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
...+.+|+|+-... . ..++.+.+.|+++|++++...
T Consensus 227 ~~~~g~D~vid~~g-----~--~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 227 EYPEGVDVVYESVG-----G--AMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp HCTTCEEEEEECSC-----T--HHHHHHHHHEEEEEEEEECCC
T ss_pred hcCCCCCEEEECCC-----H--HHHHHHHHHHhcCCEEEEEeC
Confidence 11246899886543 1 468889999999999887654
No 369
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=93.57 E-value=0.051 Score=35.36 Aligned_cols=30 Identities=17% Similarity=0.362 Sum_probs=21.2
Q ss_pred CeecccCCCc-cccccCCCCccccccccCceeeCCCCccc
Q 019957 59 DLFSCPICYE-PLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (333)
Q Consensus 59 ~~l~CP~C~~-~l~~~~~~~~~~~~~~~~~~~C~~C~~~~ 97 (333)
..+.||.|++ .+.... ..+.+.|..||.++
T Consensus 10 ~~~~Cp~C~~~~lv~D~---------~~ge~vC~~CGlVl 40 (58)
T 1dl6_A 10 PRVTCPNHPDAILVEDY---------RAGDMICPECGLVV 40 (58)
T ss_dssp SCCSBTTBSSSCCEECS---------SSCCEECTTTCCEE
T ss_pred ccccCcCCCCCceeEeC---------CCCeEEeCCCCCEE
Confidence 3457999998 443322 23689999999876
No 370
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=93.50 E-value=0.29 Score=43.84 Aligned_cols=97 Identities=10% Similarity=0.008 Sum_probs=63.2
Q ss_pred hhcccCCCeEEEEcC--CcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC---CC---
Q 019957 161 YFKSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR---LP--- 232 (333)
Q Consensus 161 ~l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~---lp--- 232 (333)
.....++.+||-+|+ |.|..+..+++.. +.+|+++|.++..++.+++.+ | .. ..+ |..+ +.
T Consensus 150 ~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~~---g----~~-~~~--d~~~~~~~~~~~ 218 (345)
T 2j3h_A 150 VCSPKEGETVYVSAASGAVGQLVGQLAKMM-GCYVVGSAGSKEKVDLLKTKF---G----FD-DAF--NYKEESDLTAAL 218 (345)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTS---C----CS-EEE--ETTSCSCSHHHH
T ss_pred HhCCCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHc---C----Cc-eEE--ecCCHHHHHHHH
Confidence 345567889999997 4577777777653 348999999998877776321 1 11 122 3221 10
Q ss_pred --CCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 233 --FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 233 --~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
...+.+|+|+.... ...+....+.|++||++++...
T Consensus 219 ~~~~~~~~d~vi~~~g-------~~~~~~~~~~l~~~G~~v~~G~ 256 (345)
T 2j3h_A 219 KRCFPNGIDIYFENVG-------GKMLDAVLVNMNMHGRIAVCGM 256 (345)
T ss_dssp HHHCTTCEEEEEESSC-------HHHHHHHHTTEEEEEEEEECCC
T ss_pred HHHhCCCCcEEEECCC-------HHHHHHHHHHHhcCCEEEEEcc
Confidence 01246899886543 2368889999999999987643
No 371
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=93.32 E-value=0.21 Score=45.66 Aligned_cols=99 Identities=22% Similarity=0.223 Sum_probs=64.2
Q ss_pred hc-ccCCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEcc------CC-CCC
Q 019957 162 FK-SAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRAD------VC-RLP 232 (333)
Q Consensus 162 l~-~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d------~~-~lp 232 (333)
.. ..++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++. | --.++..+ +. .+.
T Consensus 190 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l----G-----a~~vi~~~~~~~~~~~~~v~ 260 (380)
T 1vj0_A 190 YPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI----G-----ADLTLNRRETSVEERRKAIM 260 (380)
T ss_dssp CSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT----T-----CSEEEETTTSCHHHHHHHHH
T ss_pred cCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHc----C-----CcEEEeccccCcchHHHHHH
Confidence 44 56788999999775 78888888775224999999999888887752 1 11222221 10 010
Q ss_pred --CCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 233 --FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 233 --~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
.....+|+|+-... . ...++.+.+.|+++|++++...
T Consensus 261 ~~~~g~g~Dvvid~~g-----~-~~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 261 DITHGRGADFILEATG-----D-SRALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp HHTTTSCEEEEEECSS-----C-TTHHHHHHHHEEEEEEEEECCC
T ss_pred HHhCCCCCcEEEECCC-----C-HHHHHHHHHHHhcCCEEEEEec
Confidence 11236999985432 1 1347888999999999887643
No 372
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=93.31 E-value=0.12 Score=46.43 Aligned_cols=127 Identities=13% Similarity=0.082 Sum_probs=80.3
Q ss_pred CeEEEEcCCcCHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCC---CCCCcceEEe
Q 019957 168 GLLVDVSCGSGLFSRKFAKSGTY-SGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF---ASGFVDAVHA 243 (333)
Q Consensus 168 ~~vLDiGcG~G~~~~~l~~~~~~-~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~---~~~~fD~V~~ 243 (333)
-+++|+-||.|.+...+...|.. ..+.++|+++.+.+.-+.+. +...++.+|+.++.. +...+|+++.
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~--------~~~~~~~~DI~~~~~~~~~~~~~D~l~g 75 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNF--------PETNLLNRNIQQLTPQVIKKWNVDTILM 75 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHC--------TTSCEECCCGGGCCHHHHHHTTCCEEEE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhC--------CCCceeccccccCCHHHhccCCCCEEEe
Confidence 37999999999999999988742 35889999999888877763 344567788877642 2336899986
Q ss_pred cccccc---------CCChH-HHHHHHHHhccCC--cEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHh
Q 019957 244 GAALHC---------WPSPS-NAVAEISRILRSG--GVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTS 311 (333)
Q Consensus 244 ~~vl~h---------~~d~~-~~l~~~~r~Lkpg--G~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~ 311 (333)
..--.. ..|+. .++.++.++++.- =.+++.+.... + .. .-+.+.+.+.|++
T Consensus 76 gpPCQ~fS~ag~~~~~~d~r~~L~~~~~r~i~~~~~P~~~vlENV~g-----l-~~-----------~~~~~~i~~~l~~ 138 (333)
T 4h0n_A 76 SPPCQPFTRNGKYLDDNDPRTNSFLYLIGILDQLDNVDYILMENVKG-----F-EN-----------STVRNLFIDKLKE 138 (333)
T ss_dssp CCCCCCSEETTEECCTTCTTSCCHHHHHHHGGGCTTCCEEEEEECTT-----G-GG-----------SHHHHHHHHHHHH
T ss_pred cCCCcchhhhhhccCCcCcccccHHHHHHHHHHhcCCCEEEEecchh-----h-hh-----------hhHHHHHHHHHHh
Confidence 433222 23443 2344444444321 24455554332 1 00 0023678889999
Q ss_pred CCCcEEEE
Q 019957 312 CGLTNYTS 319 (333)
Q Consensus 312 aGf~~v~~ 319 (333)
.|+.+...
T Consensus 139 ~GY~v~~~ 146 (333)
T 4h0n_A 139 CNFIYQEF 146 (333)
T ss_dssp TTEEEEEE
T ss_pred CCCeEEEE
Confidence 99987554
No 373
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=93.28 E-value=0.17 Score=45.50 Aligned_cols=97 Identities=15% Similarity=0.070 Sum_probs=63.4
Q ss_pred HhhcccCCCeEEEEcC-C-cCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-----
Q 019957 160 EYFKSAQGGLLVDVSC-G-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----- 232 (333)
Q Consensus 160 ~~l~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp----- 232 (333)
+.....++.+||-+|+ | .|..+..+++.. +.+|++++.++..++.+++. | .. .++..+ .++.
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~----g----a~-~v~~~~-~~~~~~v~~ 221 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGM-GAKVIAVVNRTAATEFVKSV----G----AD-IVLPLE-EGWAKAVRE 221 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHH----T----CS-EEEESS-TTHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc----C----Cc-EEecCc-hhHHHHHHH
Confidence 3344567889999997 3 478887777764 34999999998888777763 1 11 222222 2211
Q ss_pred -CCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEE
Q 019957 233 -FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 233 -~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 274 (333)
.....+|+|+-...- ..+..+.+.|++||++++..
T Consensus 222 ~~~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 222 ATGGAGVDMVVDPIGG-------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp HTTTSCEEEEEESCC---------CHHHHHHTEEEEEEEEEC-
T ss_pred HhCCCCceEEEECCch-------hHHHHHHHhhcCCCEEEEEE
Confidence 112369999865432 24778889999999998864
No 374
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=93.19 E-value=0.014 Score=39.99 Aligned_cols=39 Identities=26% Similarity=0.541 Sum_probs=22.1
Q ss_pred CeecccCCCccccccC-----CCCccccc-----------cccCceeeCCCCccc
Q 019957 59 DLFSCPICYEPLIRKG-----PTGLTLGA-----------IYRSGFKCRKCDKTY 97 (333)
Q Consensus 59 ~~l~CP~C~~~l~~~~-----~~~~~~~~-----------~~~~~~~C~~C~~~~ 97 (333)
++-.||+||++|-... ..-.+..+ +.+=.+.|+.||..|
T Consensus 7 ~~~~~PlCG~~L~W~eLIeQML~~en~~ei~kDr~~Fl~~~e~F~FkCP~CgEEF 61 (95)
T 2k5c_A 7 HMAKCPICGSPLKWEELIEEMLIIENFEEIVKDRERFLAQVEEFVFKCPVCGEEF 61 (95)
T ss_dssp -CEECSSSCCEECHHHHHHHSTTCSTHHHHTTCHHHHHHHHHHSEEECTTTCCEE
T ss_pred ccccCCcCCCccCHHHHHHHHHhhccHHHHHhhHHHHHHHHHHHhhcCCCccHHH
Confidence 4668999999753211 11111112 222367899999876
No 375
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=93.10 E-value=0.55 Score=42.95 Aligned_cols=45 Identities=9% Similarity=0.109 Sum_probs=33.5
Q ss_pred CCeEEEEcCCcCHHHHHHHHhC-------CCCeEEEEeCCHHHHHHHHHHHH
Q 019957 167 GGLLVDVSCGSGLFSRKFAKSG-------TYSGVVALDFSENMLRQCYDFIK 211 (333)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~~-------~~~~v~g~D~s~~~~~~a~~~~~ 211 (333)
+-.|+|+|.|.|.++..+.+.. ...+++.+|+|+...+.-++++.
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 132 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLA 132 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHST
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhc
Confidence 3479999999999988776531 23489999999987765555543
No 376
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=92.99 E-value=0.49 Score=42.42 Aligned_cols=91 Identities=13% Similarity=0.177 Sum_probs=59.9
Q ss_pred CCCeEEEE-cCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC-----CCCCCCc
Q 019957 166 QGGLLVDV-SCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-----PFASGFV 238 (333)
Q Consensus 166 ~~~~vLDi-GcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-----p~~~~~f 238 (333)
++.+||-+ |+|. |.++..+++.. +.+|+++|.++..++.+++. | . . .++..+ .++ ....+.+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l----G---a-~-~vi~~~-~~~~~~~~~~~~~g~ 218 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY-GLRVITTASRNETIEWTKKM----G---A-D-IVLNHK-ESLLNQFKTQGIELV 218 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEECCSHHHHHHHHHH----T---C-S-EEECTT-SCHHHHHHHHTCCCE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc----C---C-c-EEEECC-ccHHHHHHHhCCCCc
Confidence 68899999 4554 77877777764 34999999999888888763 1 1 1 111111 111 0123469
Q ss_pred ceEEeccccccCCChHHHHHHHHHhccCCcEEEEE
Q 019957 239 DAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGT 273 (333)
Q Consensus 239 D~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~ 273 (333)
|+|+-... ....+..+.+.|+++|+++..
T Consensus 219 Dvv~d~~g------~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 219 DYVFCTFN------TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp EEEEESSC------HHHHHHHHHHHEEEEEEEEES
T ss_pred cEEEECCC------chHHHHHHHHHhccCCEEEEE
Confidence 98886432 245578889999999999764
No 377
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=92.93 E-value=0.46 Score=42.11 Aligned_cols=90 Identities=12% Similarity=0.123 Sum_probs=59.9
Q ss_pred eEEEEcC-C-cCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEE-ccCCCC-CCCCCCcceEEec
Q 019957 169 LLVDVSC-G-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVR-ADVCRL-PFASGFVDAVHAG 244 (333)
Q Consensus 169 ~vLDiGc-G-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~-~d~~~l-p~~~~~fD~V~~~ 244 (333)
+||=+|+ | .|.++..+++.. +.+|++++.++..++.+++. | .. .++. .+.... ....+.+|+|+-.
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~-Ga~Vi~~~~~~~~~~~~~~l----G----a~-~vi~~~~~~~~~~~~~~~~d~v~d~ 218 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL-GYQVAAVSGRESTHGYLKSL----G----AN-RILSRDEFAESRPLEKQLWAGAIDT 218 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHHH----T----CS-EEEEGGGSSCCCSSCCCCEEEEEES
T ss_pred eEEEECCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc----C----CC-EEEecCCHHHHHhhcCCCccEEEEC
Confidence 4999997 4 488888888875 44999999999888888763 1 11 1121 111111 1224578987753
Q ss_pred cccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 245 AALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 245 ~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
- .. ..+..+.+.|+++|+++....
T Consensus 219 ~-----g~--~~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 219 V-----GD--KVLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp S-----CH--HHHHHHHHTEEEEEEEEECCC
T ss_pred C-----Cc--HHHHHHHHHHhcCCEEEEEec
Confidence 2 22 378999999999999988643
No 378
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=92.88 E-value=0.5 Score=42.33 Aligned_cols=94 Identities=16% Similarity=0.092 Sum_probs=62.6
Q ss_pred cccCCCeEEEEcC--CcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC--------
Q 019957 163 KSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-------- 232 (333)
Q Consensus 163 ~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-------- 232 (333)
...++.+||-+|+ |.|..+..+++.. +.+|+++|.++..++.+++. | . . .++ |..+..
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~----g---a-~-~~~--d~~~~~~~~~~~~~ 230 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLF-GARVIATAGSEDKLRRAKAL----G---A-D-ETV--NYTHPDWPKEVRRL 230 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH----T---C-S-EEE--ETTSTTHHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhc----C---C-C-EEE--cCCcccHHHHHHHH
Confidence 4456889999998 4577777777664 34999999999888877652 1 1 1 122 322211
Q ss_pred CCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
.....+|+|+.... . ..++.+.+.|+++|++++...
T Consensus 231 ~~~~~~d~vi~~~g-~------~~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 231 TGGKGADKVVDHTG-A------LYFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp TTTTCEEEEEESSC-S------SSHHHHHHHEEEEEEEEESSC
T ss_pred hCCCCceEEEECCC-H------HHHHHHHHhhccCCEEEEEec
Confidence 11247999986554 2 237788899999999887643
No 379
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=92.84 E-value=0.28 Score=44.07 Aligned_cols=95 Identities=17% Similarity=0.183 Sum_probs=61.6
Q ss_pred cccCCCeEEEEcC--CcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC-CC-------
Q 019957 163 KSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LP------- 232 (333)
Q Consensus 163 ~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-lp------- 232 (333)
...++.+||-+|+ |.|..+..+++.. +.+|+++|.++..++.+++. | .. ..+ |..+ ..
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~V~~~~~~~~~~~~~~~~----g----~~-~~~--d~~~~~~~~~~~~~ 233 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAM-GYRVLGIDGGEGKEELFRSI----G----GE-VFI--DFTKEKDIVGAVLK 233 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSTTHHHHHHHT----T----CC-EEE--ETTTCSCHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHC-CCcEEEEcCCHHHHHHHHHc----C----Cc-eEE--ecCccHhHHHHHHH
Confidence 4567889999998 3577776666653 34999999988777766541 1 11 122 3321 11
Q ss_pred CCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
...+.+|+|+.... ....++.+.+.|+++|++++...
T Consensus 234 ~~~~~~D~vi~~~g------~~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 234 ATDGGAHGVINVSV------SEAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp HHTSCEEEEEECSS------CHHHHHHHTTSEEEEEEEEECCC
T ss_pred HhCCCCCEEEECCC------cHHHHHHHHHHHhcCCEEEEEeC
Confidence 01126898886543 13468889999999999887653
No 380
>1qyp_A RNA polymerase II; transcription, RPB9, Zn ribbon, hyperthermophilic, extremophIle; NMR {Thermococcus celer} SCOP: g.41.3.1
Probab=92.72 E-value=0.048 Score=35.31 Aligned_cols=41 Identities=22% Similarity=0.322 Sum_probs=22.4
Q ss_pred CeecccCCCccccc-cCCCCccccccccCceeeCCCCccccC
Q 019957 59 DLFSCPICYEPLIR-KGPTGLTLGAIYRSGFKCRKCDKTYSS 99 (333)
Q Consensus 59 ~~l~CP~C~~~l~~-~~~~~~~~~~~~~~~~~C~~C~~~~~~ 99 (333)
....||.|++.-.. .........+-..-.+.|.+||+.+..
T Consensus 14 ~~~~Cp~Cg~~~~~~~q~Q~rsadep~T~fy~C~~Cg~~w~~ 55 (57)
T 1qyp_A 14 TKITCPKCGNDTAYWWEMQTRAGDEPSTIFYKCTKCGHTWRS 55 (57)
T ss_dssp EECCCTTTCCSEEEEEEECCSSSSCSSEEEEEESSSCCEEEC
T ss_pred eEeECCCCCCCEEEEEEeecccCCCCCcEEEEcCCCCCEecc
Confidence 36789999984211 000000111222346899999998743
No 381
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=92.58 E-value=0.74 Score=43.46 Aligned_cols=73 Identities=16% Similarity=0.201 Sum_probs=51.2
Q ss_pred HHHHHHHHhhccc------CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEc
Q 019957 153 EEFKMAQEYFKSA------QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRA 226 (333)
Q Consensus 153 ~~~~~~~~~l~~~------~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~ 226 (333)
.+...+..+++.. ..-+++|+-||.|.+..-+...|. ..+.++|+++.+.+.-+.+... .+...++.+
T Consensus 68 ~~~~~l~~~~~~~p~~~~~~~~~viDLFaG~GGlslG~~~aG~-~~v~avE~d~~A~~ty~~N~~~-----~p~~~~~~~ 141 (482)
T 3me5_A 68 KEFAHLQTLLPKPPEHHPHYAFRFIDLFAGIGGIRRGFESIGG-QCVFTSEWNKHAVRTYKANHYC-----DPATHHFNE 141 (482)
T ss_dssp HHHHHHHTTSCCCCTTTTCCSEEEEEESCTTSHHHHHHHTTTE-EEEEEECCCHHHHHHHHHHSCC-----CTTTCEEES
T ss_pred HHHHHHHhhCCCCCccCCCccceEEEecCCccHHHHHHHHCCC-EEEEEEeCCHHHHHHHHHhccc-----CCCcceecc
Confidence 3445555555432 235799999999999999998874 3589999999888777765421 234556778
Q ss_pred cCCCC
Q 019957 227 DVCRL 231 (333)
Q Consensus 227 d~~~l 231 (333)
|+.++
T Consensus 142 DI~~i 146 (482)
T 3me5_A 142 DIRDI 146 (482)
T ss_dssp CTHHH
T ss_pred chhhh
Confidence 87654
No 382
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=92.53 E-value=0.25 Score=44.07 Aligned_cols=88 Identities=14% Similarity=0.068 Sum_probs=53.8
Q ss_pred CCeEEEEccCCC-CC-CCCCCcceEEeccccccC--------------CChHHHHHHHHHhccCCcEEEEEEecccCCCc
Q 019957 219 SNLALVRADVCR-LP-FASGFVDAVHAGAALHCW--------------PSPSNAVAEISRILRSGGVFVGTTFLRYTSST 282 (333)
Q Consensus 219 ~~i~~~~~d~~~-lp-~~~~~fD~V~~~~vl~h~--------------~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~ 282 (333)
....++++|..+ +. +++++||+|++.--.... ......++++.++|||||.+++..........
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~ 92 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGV 92 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETTE
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecCCC
Confidence 457788888754 33 457899999985332111 12457789999999999999997643210000
Q ss_pred chhhHHHHHhhhccCCCCCHHHHHHHHHhCCCcEEE
Q 019957 283 SLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYT 318 (333)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf~~v~ 318 (333)
+. ...+....+.++++..||....
T Consensus 93 ~~------------~~~~~~~~i~~~~~~~Gf~~~~ 116 (323)
T 1boo_A 93 PA------------RSIYNFRVLIRMIDEVGFFLAE 116 (323)
T ss_dssp EE------------ECCHHHHHHHHHHHTTCCEEEE
T ss_pred cc------------cccchHHHHHHHHHhCCCEEEE
Confidence 00 0011223455678899997654
No 383
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=92.51 E-value=0.21 Score=45.14 Aligned_cols=98 Identities=15% Similarity=0.111 Sum_probs=59.3
Q ss_pred ccc-CCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEcc-CCCCCCCCCCcc
Q 019957 163 KSA-QGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRAD-VCRLPFASGFVD 239 (333)
Q Consensus 163 ~~~-~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d-~~~lp~~~~~fD 239 (333)
... ++.+||-+|+|. |.++..+++.. +.+|+++|.+++.++.+++.+ | .. .++..+ ...+.-..+.+|
T Consensus 176 ~~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~~~~~~~~~~~~~l---G---a~--~vi~~~~~~~~~~~~~g~D 246 (357)
T 2cf5_A 176 GLKQPGLRGGILGLGGVGHMGVKIAKAM-GHHVTVISSSNKKREEALQDL---G---AD--DYVIGSDQAKMSELADSLD 246 (357)
T ss_dssp STTSTTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSTTHHHHHHTTS---C---CS--CEEETTCHHHHHHSTTTEE
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHc---C---Cc--eeeccccHHHHHHhcCCCC
Confidence 445 788999999875 77777777663 348999999987776665321 1 11 112111 000100123689
Q ss_pred eEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 240 AVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 240 ~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
+|+-.-.-. ..++...+.|++||+++....
T Consensus 247 ~vid~~g~~------~~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 247 YVIDTVPVH------HALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp EEEECCCSC------CCSHHHHTTEEEEEEEEECSC
T ss_pred EEEECCCCh------HHHHHHHHHhccCCEEEEeCC
Confidence 988543211 125667789999999987643
No 384
>2j6a_A Protein TRM112; translation termination, methyltransferase, transferase, ERF1, nuclear protein, protein methylation; 1.7A {Saccharomyces cerevisiae}
Probab=92.42 E-value=0.034 Score=43.04 Aligned_cols=27 Identities=30% Similarity=0.571 Sum_probs=24.3
Q ss_pred cccCceeeCCCCccccCcCCceeeecc
Q 019957 83 IYRSGFKCRKCDKTYSSKDNYLDLTVI 109 (333)
Q Consensus 83 ~~~~~~~C~~C~~~~~~~~g~~~~~~~ 109 (333)
+..|.+.|+.||+.|++++|+++++..
T Consensus 105 v~eg~L~C~~cg~~YPI~dGIP~mL~~ 131 (141)
T 2j6a_A 105 IAEGEMKCRNCGHIYYIKNGIPNLLLP 131 (141)
T ss_dssp EEEEEEECTTTCCEEEEETTEESSCCC
T ss_pred ccCCEEECCCCCCcccccCCccCcCCc
Confidence 456789999999999999999999875
No 385
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=92.33 E-value=0.25 Score=44.81 Aligned_cols=98 Identities=17% Similarity=0.146 Sum_probs=59.5
Q ss_pred ccc-CCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEcc-CCCCCCCCCCcc
Q 019957 163 KSA-QGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRAD-VCRLPFASGFVD 239 (333)
Q Consensus 163 ~~~-~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d-~~~lp~~~~~fD 239 (333)
... ++.+||-+|+|. |.++..+++.. +.+|+++|.++..++.+++.+ | .-.++... ...+.-..+.+|
T Consensus 183 ~~~~~g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~l---G-----a~~v~~~~~~~~~~~~~~~~D 253 (366)
T 1yqd_A 183 GLDEPGKHIGIVGLGGLGHVAVKFAKAF-GSKVTVISTSPSKKEEALKNF---G-----ADSFLVSRDQEQMQAAAGTLD 253 (366)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGHHHHHHTS---C-----CSEEEETTCHHHHHHTTTCEE
T ss_pred CcCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhc---C-----CceEEeccCHHHHHHhhCCCC
Confidence 444 788999999875 77777777764 348999999988776665322 1 11122111 000100013699
Q ss_pred eEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 240 AVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 240 ~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
+|+....... .++...+.|+++|+++....
T Consensus 254 ~vid~~g~~~------~~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 254 GIIDTVSAVH------PLLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp EEEECCSSCC------CSHHHHHHEEEEEEEEECCC
T ss_pred EEEECCCcHH------HHHHHHHHHhcCCEEEEEcc
Confidence 9886433211 24567788999999887643
No 386
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=92.26 E-value=0.72 Score=41.69 Aligned_cols=88 Identities=13% Similarity=0.042 Sum_probs=57.7
Q ss_pred CCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCH---HHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCC------CC
Q 019957 167 GGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSE---NMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA------SG 236 (333)
Q Consensus 167 ~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~---~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~------~~ 236 (333)
+.+||-+|+|. |..+..+++.. +.+|+++|.++ +.++.+++. +.+.+ | .+ .+. .+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~~~~----------ga~~v--~-~~-~~~~~~~~~~~ 245 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY-GLEVWMANRREPTEVEQTVIEET----------KTNYY--N-SS-NGYDKLKDSVG 245 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH-TCEEEEEESSCCCHHHHHHHHHH----------TCEEE--E-CT-TCSHHHHHHHC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCccchHHHHHHHHh----------CCcee--c-hH-HHHHHHHHhCC
Confidence 88999999854 66666666553 23999999987 777766642 12333 3 22 211 14
Q ss_pred CcceEEeccccccCCChHHHH-HHHHHhccCCcEEEEEEe
Q 019957 237 FVDAVHAGAALHCWPSPSNAV-AEISRILRSGGVFVGTTF 275 (333)
Q Consensus 237 ~fD~V~~~~vl~h~~d~~~~l-~~~~r~LkpgG~l~i~~~ 275 (333)
.+|+|+..... + ..+ +.+.+.|+++|.+++...
T Consensus 246 ~~d~vid~~g~-----~-~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 246 KFDVIIDATGA-----D-VNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp CEEEEEECCCC-----C-THHHHHHGGGEEEEEEEEECSC
T ss_pred CCCEEEECCCC-----h-HHHHHHHHHHHhcCCEEEEEec
Confidence 68998865432 1 235 888999999999887643
No 387
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=92.23 E-value=0.08 Score=35.79 Aligned_cols=31 Identities=23% Similarity=0.682 Sum_probs=22.8
Q ss_pred CeecccCCCccccccCCCCccccccccCceeeCCCCcccc
Q 019957 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYS 98 (333)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~ 98 (333)
....||.|+..-..... .|+++|..|+..+.
T Consensus 25 ~ky~C~fCgk~~vkR~a---------~GIW~C~~C~~~~A 55 (72)
T 3jyw_9 25 ARYDCSFCGKKTVKRGA---------AGIWTCSCCKKTVA 55 (72)
T ss_dssp SCBCCSSCCSSCBSBCS---------SSCBCCSSSCCCCC
T ss_pred cCccCCCCCCceeEecC---------CCeEECCCCCCEEe
Confidence 45689999986543322 37999999998774
No 388
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=92.19 E-value=0.68 Score=40.98 Aligned_cols=97 Identities=18% Similarity=0.129 Sum_probs=59.8
Q ss_pred HhhcccCCCeEEEEc-CCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC-CCCCCC
Q 019957 160 EYFKSAQGGLLVDVS-CGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LPFASG 236 (333)
Q Consensus 160 ~~l~~~~~~~vLDiG-cG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-lp~~~~ 236 (333)
+.....++.+||=+| +|. |.++..+++.. +.++++++ ++..++.+++. | . . .++..+-.+ +.-.-.
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~-Ga~vi~~~-~~~~~~~~~~l----G---a-~-~~i~~~~~~~~~~~~~ 214 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQK-GTTVITTA-SKRNHAFLKAL----G---A-E-QCINYHEEDFLLAIST 214 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEE-CHHHHHHHHHH----T---C-S-EEEETTTSCHHHHCCS
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHc-CCEEEEEe-ccchHHHHHHc----C---C-C-EEEeCCCcchhhhhcc
Confidence 445567788999997 554 88888888775 44899998 55546666542 2 1 1 122211111 111114
Q ss_pred CcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEE
Q 019957 237 FVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 237 ~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 274 (333)
.+|+|+-.-. ...+....+.|+++|+++...
T Consensus 215 g~D~v~d~~g-------~~~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 215 PVDAVIDLVG-------GDVGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp CEEEEEESSC-------HHHHHHHGGGEEEEEEEEECC
T ss_pred CCCEEEECCC-------cHHHHHHHHhccCCCEEEEeC
Confidence 6898875432 223478899999999998753
No 389
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=92.18 E-value=0.37 Score=43.45 Aligned_cols=97 Identities=12% Similarity=0.011 Sum_probs=62.6
Q ss_pred hcccCCCeEEEEc-CC-cCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-----CC
Q 019957 162 FKSAQGGLLVDVS-CG-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA 234 (333)
Q Consensus 162 l~~~~~~~vLDiG-cG-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~ 234 (333)
....++.+||-+| +| .|..+..+++.. +.+|+++|.++..++.+++. | .. ..+..+-.++. ..
T Consensus 163 ~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~l----G----a~-~~~~~~~~~~~~~~~~~~ 232 (353)
T 4dup_A 163 AGLTEGESVLIHGGTSGIGTTAIQLARAF-GAEVYATAGSTGKCEACERL----G----AK-RGINYRSEDFAAVIKAET 232 (353)
T ss_dssp TCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH----T----CS-EEEETTTSCHHHHHHHHH
T ss_pred cCCCCCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc----C----CC-EEEeCCchHHHHHHHHHh
Confidence 4456788999995 33 477777777764 34899999999988887763 1 11 12221111110 01
Q ss_pred CCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 235 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
.+.+|+|+....- ..+....+.|+++|.+++...
T Consensus 233 ~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 233 GQGVDIILDMIGA-------AYFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp SSCEEEEEESCCG-------GGHHHHHHTEEEEEEEEECCC
T ss_pred CCCceEEEECCCH-------HHHHHHHHHhccCCEEEEEEe
Confidence 3469999865432 247788899999999887653
No 390
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=92.14 E-value=0.17 Score=45.83 Aligned_cols=98 Identities=11% Similarity=0.098 Sum_probs=61.6
Q ss_pred hcccCCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCC-CC--CCCCCC
Q 019957 162 FKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVC-RL--PFASGF 237 (333)
Q Consensus 162 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~-~l--p~~~~~ 237 (333)
....++.+||-+|+|. |.++..+++.. +.+|+++|.++..++.+++. | .. .++...-. ++ ... +.
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~-Ga~Vi~~~~~~~~~~~~~~l----G----a~-~v~~~~~~~~~~~~~~-~~ 243 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAM-GAETYVISRSSRKREDAMKM----G----AD-HYIATLEEGDWGEKYF-DT 243 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHH----T----CS-EEEEGGGTSCHHHHSC-SC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHc----C----CC-EEEcCcCchHHHHHhh-cC
Confidence 4556788999999865 77777777753 33899999998888877762 1 11 12222111 11 011 47
Q ss_pred cceEEeccccccCCChHHHHHHHHHhccCCcEEEEEE
Q 019957 238 VDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 238 fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 274 (333)
+|+|+-...-. ....++.+.+.|++||+++...
T Consensus 244 ~D~vid~~g~~----~~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 244 FDLIVVCASSL----TDIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp EEEEEECCSCS----TTCCTTTGGGGEEEEEEEEECC
T ss_pred CCEEEECCCCC----cHHHHHHHHHHhcCCCEEEEec
Confidence 99998644320 0122566778999999988754
No 391
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=92.04 E-value=0.085 Score=39.68 Aligned_cols=30 Identities=23% Similarity=0.575 Sum_probs=24.4
Q ss_pred CeecccCCCccccccCCCCccccccccCceeeCCCCcccc
Q 019957 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYS 98 (333)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~ 98 (333)
.+-.||.|++...-... ..+.|+.|++.+.
T Consensus 26 ~lP~CP~C~seytYeDg----------~l~vCPeC~hEW~ 55 (138)
T 2akl_A 26 TLPPCPQCNSEYTYEDG----------ALLVCPECAHEWS 55 (138)
T ss_dssp CSCCCTTTCCCCCEECS----------SSEEETTTTEEEC
T ss_pred cCCCCCCCCCcceEecC----------CeEECCccccccC
Confidence 46789999998866554 4899999999984
No 392
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=92.01 E-value=1.4 Score=39.11 Aligned_cols=125 Identities=13% Similarity=0.148 Sum_probs=78.7
Q ss_pred eEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCC-CCCcceEEecccc
Q 019957 169 LLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA-SGFVDAVHAGAAL 247 (333)
Q Consensus 169 ~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~-~~~fD~V~~~~vl 247 (333)
+|||+=||.|.+..-+.+.|. .-+.++|+++.+.+.-+.+. .-.++.+|+.++... -..+|+++...--
T Consensus 2 kvidLFsG~GG~~~G~~~aG~-~~v~a~e~d~~a~~ty~~N~---------~~~~~~~DI~~i~~~~~~~~D~l~ggpPC 71 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGF-RIICANEYDKSIWKTYESNH---------SAKLIKGDISKISSDEFPKCDGIIGGPPS 71 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTC-EEEEEEECCTTTHHHHHHHC---------CSEEEESCGGGCCGGGSCCCSEEECCCCG
T ss_pred eEEEeCcCccHHHHHHHHCCC-EEEEEEeCCHHHHHHHHHHC---------CCCcccCChhhCCHhhCCcccEEEecCCC
Confidence 699999999999999999874 35789999998887777652 235778999876422 2468999864322
Q ss_pred c---------cCCChH-HHHHHH---HHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCC
Q 019957 248 H---------CWPSPS-NAVAEI---SRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGL 314 (333)
Q Consensus 248 ~---------h~~d~~-~~l~~~---~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf 314 (333)
+ -..|+. .++.++ .+.++|. +++.+.... + . .+...-..+.+...|++.|+
T Consensus 72 Q~fS~ag~~~g~~d~R~~L~~~~~r~i~~~~Pk--~~~~ENV~g-----l-~--------~~~~~~~~~~i~~~l~~~GY 135 (331)
T 3ubt_Y 72 QSWSEGGSLRGIDDPRGKLFYEYIRILKQKKPI--FFLAENVKG-----M-M--------AQRHNKAVQEFIQEFDNAGY 135 (331)
T ss_dssp GGTEETTEECCTTCGGGHHHHHHHHHHHHHCCS--EEEEEECCG-----G-G--------GCTTSHHHHHHHHHHHHHTE
T ss_pred CCcCCCCCccCCCCchhHHHHHHHHHHhccCCe--EEEeeeecc-----c-c--------cccccchhhhhhhhhccCCc
Confidence 1 234554 344444 3445775 344443321 0 0 01111234577788899999
Q ss_pred cEEEE
Q 019957 315 TNYTS 319 (333)
Q Consensus 315 ~~v~~ 319 (333)
.+...
T Consensus 136 ~v~~~ 140 (331)
T 3ubt_Y 136 DVHII 140 (331)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76543
No 393
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=91.96 E-value=0.78 Score=42.89 Aligned_cols=95 Identities=16% Similarity=0.213 Sum_probs=62.7
Q ss_pred cccCCCeEEEEcC-C-cCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC--------
Q 019957 163 KSAQGGLLVDVSC-G-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-------- 232 (333)
Q Consensus 163 ~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-------- 232 (333)
...++.+||=+|+ | .|.++..+++.. +.++++++.++..++.+++. | . -.++...-.+..
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~~~~~~~~~~~l----G----a-~~vi~~~~~d~~~~~~~~~~ 294 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALAG-GANPICVVSSPQKAEICRAM----G----A-EAIIDRNAEGYRFWKDENTQ 294 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH----T----C-CEEEETTTTTCCSEEETTEE
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEECCHHHHHHHHhh----C----C-cEEEecCcCccccccccccc
Confidence 4567889999997 4 388888888764 45899999899888888653 1 1 112211111110
Q ss_pred ---------------CCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEE
Q 019957 233 ---------------FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 233 ---------------~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 274 (333)
.....+|+|+-.-. ...+....+.|++||.+++..
T Consensus 295 ~~~~~~~~~~~i~~~t~g~g~Dvvid~~G-------~~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 295 DPKEWKRFGKRIRELTGGEDIDIVFEHPG-------RETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp CHHHHHHHHHHHHHHHTSCCEEEEEECSC-------HHHHHHHHHHEEEEEEEEESC
T ss_pred chHHHHHHHHHHHHHhCCCCCcEEEEcCC-------chhHHHHHHHhhCCcEEEEEe
Confidence 01247998875432 246888899999999998854
No 394
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=91.89 E-value=0.33 Score=43.11 Aligned_cols=95 Identities=11% Similarity=0.075 Sum_probs=60.9
Q ss_pred hcccCCCeEEEEcC--CcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-------
Q 019957 162 FKSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------- 232 (333)
Q Consensus 162 l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------- 232 (333)
....++.+||-.|+ |.|..+..+++.. +.+|+++|.++..++.+++. + .. ..+ |..+..
T Consensus 136 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~----g----~~-~~~--~~~~~~~~~~~~~ 203 (327)
T 1qor_A 136 YEIKPDEQFLFHAAAGGVGLIACQWAKAL-GAKLIGTVGTAQKAQSALKA----G----AW-QVI--NYREEDLVERLKE 203 (327)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHH----T----CS-EEE--ETTTSCHHHHHHH
T ss_pred hCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHc----C----CC-EEE--ECCCccHHHHHHH
Confidence 34567889999994 4466666655542 23999999998888777652 1 11 122 222111
Q ss_pred -CCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 233 -FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 233 -~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
.....+|+|+.... ...++.+.+.|++||++++...
T Consensus 204 ~~~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 204 ITGGKKVRVVYDSVG-------RDTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp HTTTCCEEEEEECSC-------GGGHHHHHHTEEEEEEEEECCC
T ss_pred HhCCCCceEEEECCc-------hHHHHHHHHHhcCCCEEEEEec
Confidence 11236999986543 2347888999999999887653
No 395
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=91.82 E-value=2.1 Score=36.71 Aligned_cols=70 Identities=13% Similarity=0.086 Sum_probs=49.0
Q ss_pred CeEEEEcCCcCHHHHHHHH----hCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEe
Q 019957 168 GLLVDVSCGSGLFSRKFAK----SGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (333)
Q Consensus 168 ~~vLDiGcG~G~~~~~l~~----~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 243 (333)
.+||=.|+ |.++..+.+ .+. +|++++.++....... ..++.++.+|+.++. -..+|+|+.
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~----------~~~~~~~~~D~~d~~--~~~~d~vi~ 69 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGW--RIIGTSRNPDQMEAIR----------ASGAEPLLWPGEEPS--LDGVTHLLI 69 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTC--EEEEEESCGGGHHHHH----------HTTEEEEESSSSCCC--CTTCCEEEE
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCC--EEEEEEcChhhhhhHh----------hCCCeEEEecccccc--cCCCCEEEE
Confidence 57999995 766665554 444 8999999876544332 236899999998866 457899998
Q ss_pred ccccccCCCh
Q 019957 244 GAALHCWPSP 253 (333)
Q Consensus 244 ~~vl~h~~d~ 253 (333)
........++
T Consensus 70 ~a~~~~~~~~ 79 (286)
T 3ius_A 70 STAPDSGGDP 79 (286)
T ss_dssp CCCCBTTBCH
T ss_pred CCCccccccH
Confidence 7665544444
No 396
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=91.61 E-value=0.6 Score=42.03 Aligned_cols=95 Identities=11% Similarity=-0.021 Sum_probs=61.1
Q ss_pred hcccCCCeEEEEcC--CcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-------
Q 019957 162 FKSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------- 232 (333)
Q Consensus 162 l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------- 232 (333)
....++.+||-+|+ |.|..+..+++.. +.+|+++|.++..++.+++. | .. ..+ |..+..
T Consensus 158 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~----g----~~-~~~--~~~~~~~~~~~~~ 225 (354)
T 2j8z_A 158 GNVQAGDYVLIHAGLSGVGTAAIQLTRMA-GAIPLVTAGSQKKLQMAEKL----G----AA-AGF--NYKKEDFSEATLK 225 (354)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH----T----CS-EEE--ETTTSCHHHHHHH
T ss_pred cCCCCCCEEEEECCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHc----C----Cc-EEE--ecCChHHHHHHHH
Confidence 34567889999984 4477766666653 34999999999888877542 1 11 112 222111
Q ss_pred -CCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 233 -FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 233 -~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
.....+|+|+....- + .+....+.|++||++++...
T Consensus 226 ~~~~~~~d~vi~~~G~-----~--~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 226 FTKGAGVNLILDCIGG-----S--YWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp HTTTSCEEEEEESSCG-----G--GHHHHHHHEEEEEEEEECCC
T ss_pred HhcCCCceEEEECCCc-----h--HHHHHHHhccCCCEEEEEec
Confidence 112469998865432 1 47788899999999988654
No 397
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=91.58 E-value=0.27 Score=44.08 Aligned_cols=95 Identities=14% Similarity=0.069 Sum_probs=62.1
Q ss_pred hhcccCCCeEEEEcCCc-CHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCC-----
Q 019957 161 YFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYS-GVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF----- 233 (333)
Q Consensus 161 ~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~----- 233 (333)
..+. ++.+||-+|+|. |.++..+++.. +. +|+++|.++..++.+++. . -.++ |..+..+
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~l--a--------~~v~--~~~~~~~~~~~~ 225 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRAS-GAGPILVSDPNPYRLAFARPY--A--------DRLV--NPLEEDLLEVVR 225 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHGGGTTT--C--------SEEE--CTTTSCHHHHHH
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh--H--------Hhcc--CcCccCHHHHHH
Confidence 3445 788999999865 77777887765 44 899999998877666542 1 1111 2211110
Q ss_pred --CCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 234 --ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 234 --~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
....+|+|+-... . ...++...+.|+++|++++...
T Consensus 226 ~~~~~g~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 226 RVTGSGVEVLLEFSG-----N-EAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp HHHSSCEEEEEECSC-----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred HhcCCCCCEEEECCC-----C-HHHHHHHHHHHhcCCEEEEEec
Confidence 0236899875432 2 3457889999999999887643
No 398
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=91.46 E-value=0.72 Score=41.29 Aligned_cols=94 Identities=14% Similarity=0.023 Sum_probs=61.7
Q ss_pred hhcccCCCeEEEEcC-C-cCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC------
Q 019957 161 YFKSAQGGLLVDVSC-G-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------ 232 (333)
Q Consensus 161 ~l~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------ 232 (333)
.....++.+||-+|+ | .|.++..+++.. +.+|+++ .++..++.+++. | ...+. +-.++.
T Consensus 145 ~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~-Ga~Vi~~-~~~~~~~~~~~l----G------a~~i~-~~~~~~~~~~~~ 211 (343)
T 3gaz_A 145 RAQVQDGQTVLIQGGGGGVGHVAIQIALAR-GARVFAT-ARGSDLEYVRDL----G------ATPID-ASREPEDYAAEH 211 (343)
T ss_dssp TTCCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEE-ECHHHHHHHHHH----T------SEEEE-TTSCHHHHHHHH
T ss_pred hcCCCCCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEE-eCHHHHHHHHHc----C------CCEec-cCCCHHHHHHHH
Confidence 345567889999994 4 488887777764 4489999 788887777653 1 22222 212111
Q ss_pred CCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEE
Q 019957 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 274 (333)
.....+|+|+-... . ..+....+.|+++|.+++..
T Consensus 212 ~~~~g~D~vid~~g-----~--~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 212 TAGQGFDLVYDTLG-----G--PVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp HTTSCEEEEEESSC-----T--HHHHHHHHHEEEEEEEEESC
T ss_pred hcCCCceEEEECCC-----c--HHHHHHHHHHhcCCeEEEEc
Confidence 11246999885432 2 46888889999999998754
No 399
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=91.39 E-value=3.4 Score=31.38 Aligned_cols=91 Identities=11% Similarity=0.090 Sum_probs=58.4
Q ss_pred CCeEEEEcCCc-CH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC----CCCCCcce
Q 019957 167 GGLLVDVSCGS-GL-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----FASGFVDA 240 (333)
Q Consensus 167 ~~~vLDiGcG~-G~-~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp----~~~~~fD~ 240 (333)
..+|+=+|+|. |. ++..|.+.+. +|+++|.+++.++.+++ .++.++.+|..+.. ..-..+|+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~--~v~vid~~~~~~~~~~~----------~g~~~i~gd~~~~~~l~~a~i~~ad~ 74 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI--PLVVIETSRTRVDELRE----------RGVRAVLGNAANEEIMQLAHLECAKW 74 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC--CEEEEESCHHHHHHHHH----------TTCEEEESCTTSHHHHHHTTGGGCSE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC--CEEEEECCHHHHHHHHH----------cCCCEEECCCCCHHHHHhcCcccCCE
Confidence 34799999976 54 3445555554 99999999998877664 25678888886532 11246888
Q ss_pred EEeccccccCCChH--HHHHHHHHhccCCcEEEEEE
Q 019957 241 VHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 241 V~~~~vl~h~~d~~--~~l~~~~r~LkpgG~l~i~~ 274 (333)
|+... ++.. ..+-...+.+.|+..++...
T Consensus 75 vi~~~-----~~~~~n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 75 LILTI-----PNGYEAGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp EEECC-----SCHHHHHHHHHHHHHHCSSSEEEEEE
T ss_pred EEEEC-----CChHHHHHHHHHHHHHCCCCeEEEEE
Confidence 77542 2332 22344556677888766655
No 400
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=91.30 E-value=0.62 Score=41.47 Aligned_cols=95 Identities=14% Similarity=0.121 Sum_probs=61.8
Q ss_pred hcccCCCeEEEEcC--CcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-------
Q 019957 162 FKSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------- 232 (333)
Q Consensus 162 l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------- 232 (333)
....++.+||-.|+ |.|..+..+++.. +.+|+++|.+++.++.+++. + .. ..+ |..+..
T Consensus 141 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~----g----~~-~~~--d~~~~~~~~~i~~ 208 (333)
T 1wly_A 141 HKVKPGDYVLIHAAAGGMGHIMVPWARHL-GATVIGTVSTEEKAETARKL----G----CH-HTI--NYSTQDFAEVVRE 208 (333)
T ss_dssp SCCCTTCEEEETTTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH----T----CS-EEE--ETTTSCHHHHHHH
T ss_pred hCCCCCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc----C----CC-EEE--ECCCHHHHHHHHH
Confidence 34567889999995 5577776666653 34999999999887777652 1 11 112 222211
Q ss_pred -CCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 233 -FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 233 -~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
.....+|+|+....- ..++.+.+.|++||+++....
T Consensus 209 ~~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 209 ITGGKGVDVVYDSIGK-------DTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp HHTTCCEEEEEECSCT-------TTHHHHHHTEEEEEEEEECCC
T ss_pred HhCCCCCeEEEECCcH-------HHHHHHHHhhccCCEEEEEec
Confidence 012368998865431 347888899999999887653
No 401
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=91.25 E-value=0.12 Score=33.19 Aligned_cols=36 Identities=19% Similarity=0.323 Sum_probs=24.8
Q ss_pred cccccCeecccCCCccccccCCCCccccccccCceeeCCCCcccc
Q 019957 54 LELEGDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYS 98 (333)
Q Consensus 54 ~~~~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~ 98 (333)
..+.....-||.||+.+..... .+.+.|..||..+.
T Consensus 12 gki~~~~~fCPkCG~~~~ma~~---------~dr~~C~kCgyt~~ 47 (55)
T 2k4x_A 12 GKLVRKHRFCPRCGPGVFLAEH---------ADRYSCGRCGYTEF 47 (55)
T ss_dssp CCCCCSSCCCTTTTTTCCCEEC---------SSEEECTTTCCCEE
T ss_pred CEEEEccccCcCCCCceeEecc---------CCEEECCCCCCEEE
Confidence 3455667889999996532211 14899999988763
No 402
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=91.06 E-value=0.11 Score=37.01 Aligned_cols=28 Identities=25% Similarity=0.593 Sum_probs=21.6
Q ss_pred CeecccCCCccccccCCCCccccccccCceeeCCCCccc
Q 019957 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (333)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~ 97 (333)
+...||.|++++...+ +.+.|..|+..|
T Consensus 31 M~~~CP~Cq~eL~~~g-----------~~~hC~~C~~~f 58 (101)
T 2jne_A 31 MELHCPQCQHVLDQDN-----------GHARCRSCGEFI 58 (101)
T ss_dssp CCCBCSSSCSBEEEET-----------TEEEETTTCCEE
T ss_pred ccccCccCCCcceecC-----------CEEECccccchh
Confidence 3489999999997754 367788888766
No 403
>1tfi_A Transcriptional elongation factor SII; transcription regulation; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=90.95 E-value=0.1 Score=32.80 Aligned_cols=41 Identities=17% Similarity=0.350 Sum_probs=22.6
Q ss_pred cCeecccCCCcccccc-CCCCccccccccCceeeCCCCcccc
Q 019957 58 GDLFSCPICYEPLIRK-GPTGLTLGAIYRSGFKCRKCDKTYS 98 (333)
Q Consensus 58 ~~~l~CP~C~~~l~~~-~~~~~~~~~~~~~~~~C~~C~~~~~ 98 (333)
.....||.|++.-... .....+.++-..-.+.|.+||+.+.
T Consensus 7 t~~~~Cp~Cg~~~a~f~q~Q~RsaDE~mT~Fy~C~~Cg~~w~ 48 (50)
T 1tfi_A 7 TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 48 (50)
T ss_dssp CCCSCCSSSCSSCEEEEEECSSSSSSCCEEEEEESSSCCEEE
T ss_pred eCccCCCCCCCCEEEEEEecCcCCCCCceEEEEcCCCCCeEE
Confidence 4567899999842110 0001111122234688999999763
No 404
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=90.76 E-value=0.74 Score=42.68 Aligned_cols=46 Identities=11% Similarity=0.244 Sum_probs=34.9
Q ss_pred CCeEEEEcCCcCHHHHHHHHh----CC-CCeEEEEeCCHHHHHHHHHHHHh
Q 019957 167 GGLLVDVSCGSGLFSRKFAKS----GT-YSGVVALDFSENMLRQCYDFIKQ 212 (333)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~----~~-~~~v~g~D~s~~~~~~a~~~~~~ 212 (333)
...|+|+|.|+|.+...+.+. .+ ..+++.+|+|+...+.-++++..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 468999999999987776543 21 23799999999877776766654
No 405
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=90.73 E-value=0.079 Score=36.87 Aligned_cols=30 Identities=23% Similarity=0.740 Sum_probs=22.2
Q ss_pred eecccCCCccccccCCCCccccccccCceeeCCCCcccc
Q 019957 60 LFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYS 98 (333)
Q Consensus 60 ~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~ 98 (333)
.+.||.|+..-.... -.|+++|..|+..+.
T Consensus 35 ky~CpfCGk~~vkR~---------a~GIW~C~kCg~~~A 64 (83)
T 3j21_i 35 KHTCPVCGRKAVKRI---------STGIWQCQKCGATFA 64 (83)
T ss_dssp CBCCSSSCSSCEEEE---------ETTEEEETTTCCEEE
T ss_pred ccCCCCCCCceeEec---------CcCeEEcCCCCCEEe
Confidence 568999998643322 137999999998874
No 406
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=90.62 E-value=0.34 Score=42.53 Aligned_cols=93 Identities=17% Similarity=0.077 Sum_probs=59.3
Q ss_pred ccCCCeEEEEcC--CcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccC-CCCCCCCCCcce
Q 019957 164 SAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV-CRLPFASGFVDA 240 (333)
Q Consensus 164 ~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~-~~lp~~~~~fD~ 240 (333)
..++.+||-+|+ |.|..+..+++.. +.+|+++|.++..++.+++. | .. ..+..+- .++.-.-+.+|+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~----g----a~-~~~~~~~~~~~~~~~~~~d~ 192 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM-GLRVLAAASRPEKLALPLAL----G----AE-EAATYAEVPERAKAWGGLDL 192 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHHT----T----CS-EEEEGGGHHHHHHHTTSEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhc----C----CC-EEEECCcchhHHHHhcCceE
Confidence 557889999998 3477777777764 34999999998877777541 1 11 1222110 111000046999
Q ss_pred EEeccccccCCChHHHHHHHHHhccCCcEEEEEE
Q 019957 241 VHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 241 V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 274 (333)
|+. .. . ..++...+.|+++|+++...
T Consensus 193 vid-~g-----~--~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 193 VLE-VR-----G--KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp EEE-CS-----C--TTHHHHHTTEEEEEEEEEC-
T ss_pred EEE-CC-----H--HHHHHHHHhhccCCEEEEEe
Confidence 886 32 1 24788899999999988754
No 407
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=90.38 E-value=1.3 Score=39.80 Aligned_cols=98 Identities=10% Similarity=-0.020 Sum_probs=63.1
Q ss_pred HhhcccCC--CeEEEEcC--CcCHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC--
Q 019957 160 EYFKSAQG--GLLVDVSC--GSGLFSRKFAKSGTYS-GVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-- 232 (333)
Q Consensus 160 ~~l~~~~~--~~vLDiGc--G~G~~~~~l~~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-- 232 (333)
+.....++ .+||-.|+ |.|..+..+++.. +. +|+++|.++..++.+++.+ | .. ..+ |..+..
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~-Ga~~Vi~~~~~~~~~~~~~~~~---g----~~-~~~--d~~~~~~~ 220 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFL-GCSRVVGICGTHEKCILLTSEL---G----FD-AAI--NYKKDNVA 220 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTS---C----CS-EEE--ETTTSCHH
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHc---C----Cc-eEE--ecCchHHH
Confidence 34455667 89999997 3477777766664 44 8999999987777665421 1 11 112 322211
Q ss_pred -----CCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 233 -----FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 233 -----~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
...+.+|+|+.... ...++.+.+.|++||++++...
T Consensus 221 ~~~~~~~~~~~d~vi~~~G-------~~~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 221 EQLRESCPAGVDVYFDNVG-------GNISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp HHHHHHCTTCEEEEEESCC-------HHHHHHHHHTEEEEEEEEECCC
T ss_pred HHHHHhcCCCCCEEEECCC-------HHHHHHHHHHhccCcEEEEECC
Confidence 11126899886544 2568889999999999987643
No 408
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=90.28 E-value=1.4 Score=40.84 Aligned_cols=96 Identities=18% Similarity=0.155 Sum_probs=61.9
Q ss_pred hcccCCCeEEEEcC-C-cCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-------
Q 019957 162 FKSAQGGLLVDVSC-G-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------- 232 (333)
Q Consensus 162 l~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------- 232 (333)
....++.+||=+|+ | .|..+..+++.. +.++++++.++..++.+++. | . . .++...-.++.
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~-Ga~vi~~~~~~~~~~~~~~l----G---a-~-~~i~~~~~~~~~~~~~~~ 285 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNG-GGIPVAVVSSAQKEAAVRAL----G---C-D-LVINRAELGITDDIADDP 285 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT----T---C-C-CEEEHHHHTCCTTGGGCH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc----C---C-C-EEEecccccccccccccc
Confidence 34567889999997 4 377777777764 45899999999888877652 2 1 1 11211101100
Q ss_pred ----------------CCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEE
Q 019957 233 ----------------FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 233 ----------------~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 274 (333)
.....+|+|+-... ...++...+.|++||.+++..
T Consensus 286 ~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G-------~~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 286 RRVVETGRKLAKLVVEKAGREPDIVFEHTG-------RVTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCSEEEECSC-------HHHHHHHHHHSCTTCEEEESC
T ss_pred cccchhhhHHHHHHHHHhCCCceEEEECCC-------chHHHHHHHHHhcCCEEEEEe
Confidence 01246899886443 135788889999999998864
No 409
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=90.03 E-value=0.099 Score=37.09 Aligned_cols=32 Identities=16% Similarity=0.489 Sum_probs=22.7
Q ss_pred CeecccCCCccccccCCCCccccccccCceeeCCCCccccC
Q 019957 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSS 99 (333)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~ 99 (333)
..+.||.|+..-.... -.|+++|..|+..+.-
T Consensus 35 ~ky~CpfCgk~~vkR~---------a~GIW~C~~Cg~~~AG 66 (92)
T 3iz5_m 35 SKYFCEFCGKFAVKRK---------AVGIWGCKDCGKVKAG 66 (92)
T ss_dssp SCBCCTTTCSSCBEEE---------ETTEEECSSSCCEEEC
T ss_pred ccccCcccCCCeeEec---------CcceEEcCCCCCEEeC
Confidence 3568999998643322 2379999999987743
No 410
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=89.96 E-value=0.097 Score=38.74 Aligned_cols=31 Identities=23% Similarity=0.623 Sum_probs=22.2
Q ss_pred CeecccCCCccccccCCCCccccccccCceeeCCCCcccc
Q 019957 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYS 98 (333)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~ 98 (333)
....||.|+..-..... .++++|..|+..|.
T Consensus 59 akytCPfCGk~~vKR~a---------vGIW~C~~Cgk~fA 89 (116)
T 3cc2_Z 59 EDHACPNCGEDRVDRQG---------TGIWQCSYCDYKFT 89 (116)
T ss_dssp SCEECSSSCCEEEEEEE---------TTEEEETTTCCEEE
T ss_pred cCCcCCCCCCceeEecC---------ceeEECCCCCCEEE
Confidence 46789999984332221 37999999998874
No 411
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=89.80 E-value=0.22 Score=45.59 Aligned_cols=102 Identities=18% Similarity=0.153 Sum_probs=57.2
Q ss_pred cCCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEe
Q 019957 165 AQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (333)
Q Consensus 165 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 243 (333)
.++.+|+=+|+|. |......++.. +.+|+++|.++..++.+++.+.. .+.....+..++.-.-...|+|+.
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~-Ga~V~~~d~~~~~l~~~~~~~g~-------~~~~~~~~~~~l~~~l~~aDvVi~ 237 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGM-GATVTVLDINIDKLRQLDAEFCG-------RIHTRYSSAYELEGAVKRADLVIG 237 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTT-------SSEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhcCC-------eeEeccCCHHHHHHHHcCCCEEEE
Confidence 3578999999975 55554444443 33999999999887777653211 111111111111100125799887
Q ss_pred ccccccCCChHHHHHHHHHhccCCcEEEEEE
Q 019957 244 GAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 244 ~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 274 (333)
.-.......+.-+.++..+.+||||+++...
T Consensus 238 ~~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 238 AVLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CCCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 4322221112222456777899999887654
No 412
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=89.60 E-value=2.5 Score=37.39 Aligned_cols=91 Identities=14% Similarity=0.180 Sum_probs=58.2
Q ss_pred CeEEEEcCCc-C-HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEecc
Q 019957 168 GLLVDVSCGS-G-LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 245 (333)
Q Consensus 168 ~~vLDiGcG~-G-~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~ 245 (333)
.+|.=||+|. | .++..+.+.+...+|+++|.++..++.+.+ .| .+.-...+..++ .-...|+|+..-
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~----~G-----~~~~~~~~~~~~--~~~~aDvVilav 102 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD----LG-----IIDEGTTSIAKV--EDFSPDFVMLSS 102 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH----TT-----SCSEEESCTTGG--GGGCCSEEEECS
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH----CC-----CcchhcCCHHHH--hhccCCEEEEeC
Confidence 5899999986 4 566677777654589999999988777654 12 111122333320 123579988754
Q ss_pred ccccCCChHHHHHHHHHhccCCcEEEE
Q 019957 246 ALHCWPSPSNAVAEISRILRSGGVFVG 272 (333)
Q Consensus 246 vl~h~~d~~~~l~~~~r~LkpgG~l~i 272 (333)
-... ...+++++...+++|.+++-
T Consensus 103 p~~~---~~~vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 103 PVRT---FREIAKKLSYILSEDATVTD 126 (314)
T ss_dssp CGGG---HHHHHHHHHHHSCTTCEEEE
T ss_pred CHHH---HHHHHHHHhhccCCCcEEEE
Confidence 3332 35678888888998876544
No 413
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=89.57 E-value=0.18 Score=34.01 Aligned_cols=30 Identities=17% Similarity=0.491 Sum_probs=22.7
Q ss_pred ccCeecccCCCccccccCCCCccccccccCceeeCCCCcc
Q 019957 57 EGDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKT 96 (333)
Q Consensus 57 ~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~ 96 (333)
....+.|+.|+..+..... ...+|+.||+.
T Consensus 25 ~~v~Y~C~~CG~~~e~~~~----------d~irCp~CG~R 54 (70)
T 1twf_L 25 ATLKYICAECSSKLSLSRT----------DAVRCKDCGHR 54 (70)
T ss_dssp CCCCEECSSSCCEECCCTT----------STTCCSSSCCC
T ss_pred ceEEEECCCCCCcceeCCC----------CCccCCCCCce
Confidence 4567899999998655432 46799999983
No 414
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=89.40 E-value=0.17 Score=35.02 Aligned_cols=26 Identities=35% Similarity=0.990 Sum_probs=17.2
Q ss_pred ecccCCCccccccCCCCccccccccCceeeCCCCccc
Q 019957 61 FSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (333)
Q Consensus 61 l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~ 97 (333)
..||.|++++.... +..+|..|+..|
T Consensus 3 ~~CP~C~~~l~~~~-----------~~~~C~~C~~~~ 28 (81)
T 2jrp_A 3 ITCPVCHHALERNG-----------DTAHCETCAKDF 28 (81)
T ss_dssp CCCSSSCSCCEECS-----------SEEECTTTCCEE
T ss_pred CCCCCCCCccccCC-----------CceECccccccC
Confidence 67888888876543 255566666655
No 415
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=89.38 E-value=4.2 Score=35.12 Aligned_cols=78 Identities=17% Similarity=0.163 Sum_probs=54.8
Q ss_pred CCCeEEEEcCCcC---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCC-C----C----
Q 019957 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-P----F---- 233 (333)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-p----~---- 233 (333)
.+++||=.|++.| .++..|++.|. +|++++.++..++.+.+.+...+ ..++.++.+|+.+. . +
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dl~~~~~~v~~~~~~~ 85 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNGI--MVVLTCRDVTKGHEAVEKLKNSN---HENVVFHQLDVTDPIATMSSLADFI 85 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTT---CCSEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC---CCceEEEEccCCCcHHHHHHHHHHH
Confidence 3567888887654 34555666665 99999999988777777766544 45799999999875 2 0
Q ss_pred --CCCCcceEEeccccc
Q 019957 234 --ASGFVDAVHAGAALH 248 (333)
Q Consensus 234 --~~~~fD~V~~~~vl~ 248 (333)
.-+..|+++.+..+.
T Consensus 86 ~~~~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 86 KTHFGKLDILVNNAGVA 102 (311)
T ss_dssp HHHHSSCCEEEECCCCC
T ss_pred HHhCCCCCEEEECCccc
Confidence 014789999876653
No 416
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=89.27 E-value=0.11 Score=37.61 Aligned_cols=32 Identities=22% Similarity=0.707 Sum_probs=22.9
Q ss_pred CeecccCCCccccccCCCCccccccccCceeeCCCCccccC
Q 019957 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSS 99 (333)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~ 99 (333)
..+.||.|+..-..... .|+++|..|+..+.-
T Consensus 35 aky~CpfCgk~~vKR~a---------~GIW~C~kCg~~~AG 66 (103)
T 4a17_Y 35 AKYGCPFCGKVAVKRAA---------VGIWKCKPCKKIIAG 66 (103)
T ss_dssp SCEECTTTCCEEEEEEE---------TTEEEETTTTEEEEC
T ss_pred cCCCCCCCCCceeeecC---------cceEEcCCCCCEEeC
Confidence 45789999986433221 379999999987743
No 417
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=89.18 E-value=0.12 Score=36.69 Aligned_cols=32 Identities=22% Similarity=0.639 Sum_probs=22.7
Q ss_pred CeecccCCCccccccCCCCccccccccCceeeCCCCccccC
Q 019957 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSS 99 (333)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~ 99 (333)
..+.||.|+..-.... -.|+++|..|+..+.-
T Consensus 35 ~ky~CpfCgk~~vkR~---------a~GIW~C~~C~~~~AG 66 (92)
T 3izc_m 35 ARYDCSFCGKKTVKRG---------AAGIWTCSCCKKTVAG 66 (92)
T ss_dssp SCCCCSSSCSSCCEEE---------ETTEEECTTTCCEEEC
T ss_pred cCCcCCCCCCceeeec---------ccceEEcCCCCCEEeC
Confidence 4568999998643322 2379999999987643
No 418
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=89.10 E-value=0.31 Score=44.22 Aligned_cols=102 Identities=18% Similarity=0.180 Sum_probs=58.4
Q ss_pred CCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEec
Q 019957 166 QGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (333)
Q Consensus 166 ~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~ 244 (333)
++.+||=+|+|. |.....++... +.+|+++|.++..++.+.+.... .+..+..+..++.-.-..+|+|+..
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~-Ga~V~v~dr~~~r~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~DvVI~~ 237 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGL-GAQVQIFDINVERLSYLETLFGS-------RVELLYSNSAEIETAVAEADLLIGA 237 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGG-------GSEEEECCHHHHHHHHHTCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhhCc-------eeEeeeCCHHHHHHHHcCCCEEEEC
Confidence 357999999975 55555544443 23999999999888777664322 1222211111111001258999865
Q ss_pred cccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 245 AALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 245 ~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
-.......|.-+.++..+.+++||+++....
T Consensus 238 ~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 238 VLVPGRRAPILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp CCCTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred CCcCCCCCCeecCHHHHhhCCCCCEEEEEec
Confidence 4443322222123456678999998877543
No 419
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=89.07 E-value=3.1 Score=35.31 Aligned_cols=78 Identities=23% Similarity=0.336 Sum_probs=55.9
Q ss_pred CCCeEEEEcC-CcC---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-----CC--
Q 019957 166 QGGLLVDVSC-GSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA-- 234 (333)
Q Consensus 166 ~~~~vLDiGc-G~G---~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~-- 234 (333)
.++++|=.|+ |.| .++..|.+.+. +|+.+|.+...++...+.+...+ ..++.++.+|+.+.. +.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGA--DVVISDYHERRLGETRDQLADLG---LGRVEAVVCDVTSTEAVDALITQT 95 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTC---SSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHHHhcC---CCceEEEEeCCCCHHHHHHHHHHH
Confidence 3668898887 554 35667777765 89999999988877777765543 458999999997742 10
Q ss_pred ---CCCcceEEeccccc
Q 019957 235 ---SGFVDAVHAGAALH 248 (333)
Q Consensus 235 ---~~~fD~V~~~~vl~ 248 (333)
-+..|+++.+..+.
T Consensus 96 ~~~~g~id~li~~Ag~~ 112 (266)
T 3o38_A 96 VEKAGRLDVLVNNAGLG 112 (266)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHhCCCcEEEECCCcC
Confidence 13689999876653
No 420
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=89.06 E-value=2.3 Score=36.14 Aligned_cols=106 Identities=16% Similarity=0.262 Sum_probs=68.4
Q ss_pred CCCeEEEEcCC--c--C-HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-----CC-
Q 019957 166 QGGLLVDVSCG--S--G-LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA- 234 (333)
Q Consensus 166 ~~~~vLDiGcG--~--G-~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~- 234 (333)
.++++|=.|++ . | .++..|++.+. +|+.++.+....+...+.....+ ..++.++.+|+.+.. +.
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~ 80 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGA--RLIFTYAGERLEKSVHELAGTLD---RNDSIILPCDVTNDAEIETCFAS 80 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHTSS---SCCCEEEECCCSSSHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC--EEEEecCchHHHHHHHHHHHhcC---CCCceEEeCCCCCHHHHHHHHHH
Confidence 35688999865 3 3 35667777765 89999988766555555554433 347899999998753 10
Q ss_pred ----CCCcceEEecccccc----C-----CChH--------------HHHHHHHHhccCCcEEEEEEec
Q 019957 235 ----SGFVDAVHAGAALHC----W-----PSPS--------------NAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 235 ----~~~fD~V~~~~vl~h----~-----~d~~--------------~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
-+.+|+++.+..+.+ . .+.. .+++.+...++++|.++.....
T Consensus 81 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~ 149 (266)
T 3oig_A 81 IKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYL 149 (266)
T ss_dssp HHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECG
T ss_pred HHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecc
Confidence 136898887665432 1 1111 2455666777888988877644
No 421
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=89.02 E-value=2.1 Score=36.38 Aligned_cols=101 Identities=21% Similarity=0.286 Sum_probs=66.1
Q ss_pred CCCeEEEEcCCcC---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCC---------
Q 019957 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF--------- 233 (333)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~--------- 233 (333)
.++++|=.|++.| .++..|++.|. +|+.+|.++..++...+.+ ..++.++.+|+.+..-
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGA--EVLLTGRNESNIARIREEF-------GPRVHALRSDIADLNEIAVLGAAAG 77 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH-------GGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHh-------CCcceEEEccCCCHHHHHHHHHHHH
Confidence 4668898887665 34556666665 9999999988776665543 2368889999876420
Q ss_pred -CCCCcceEEeccccccCC-----Ch--------------HHHHHHHHHhccCCcEEEEEEe
Q 019957 234 -ASGFVDAVHAGAALHCWP-----SP--------------SNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 234 -~~~~fD~V~~~~vl~h~~-----d~--------------~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
.-+..|+++.+..+.... ++ ..+++.+...++++|.++....
T Consensus 78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 139 (255)
T 4eso_A 78 QTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSS 139 (255)
T ss_dssp HHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECC
Confidence 014789998766543321 11 1235566667777888777654
No 422
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=88.99 E-value=3.7 Score=36.19 Aligned_cols=79 Identities=15% Similarity=0.210 Sum_probs=55.6
Q ss_pred CCCeEEEEcCCcC---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-----CC---
Q 019957 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA--- 234 (333)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~--- 234 (333)
.+.+||=.|++.| .++..|++.|. +|++++.++..++...+.+...+. ..++.++.+|+.+.. +.
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~--~Vv~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~ 82 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGC--KVAIADIRQDSIDKALATLEAEGS--GPEVMGVQLDVASREGFKMAADEVE 82 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHTC--GGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCC--CCeEEEEECCCCCHHHHHHHHHHHH
Confidence 4568999997765 35566666665 899999999888777776655431 337889999997642 10
Q ss_pred --CCCcceEEeccccc
Q 019957 235 --SGFVDAVHAGAALH 248 (333)
Q Consensus 235 --~~~fD~V~~~~vl~ 248 (333)
-+..|+++.+..+.
T Consensus 83 ~~~g~id~lv~nAg~~ 98 (319)
T 3ioy_A 83 ARFGPVSILCNNAGVN 98 (319)
T ss_dssp HHTCCEEEEEECCCCC
T ss_pred HhCCCCCEEEECCCcC
Confidence 14689999876654
No 423
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=88.84 E-value=1.4 Score=39.95 Aligned_cols=95 Identities=14% Similarity=0.087 Sum_probs=57.7
Q ss_pred ccCCCeEEEEc-CC-cCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC---CCCCCc
Q 019957 164 SAQGGLLVDVS-CG-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP---FASGFV 238 (333)
Q Consensus 164 ~~~~~~vLDiG-cG-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp---~~~~~f 238 (333)
..++.+||=+| +| .|.++..+++.. +.+|++++ ++..++.+++ .| .. .++..+-.++. .....+
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~-Ga~Vi~~~-~~~~~~~~~~----lG----a~-~v~~~~~~~~~~~~~~~~g~ 249 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW-DAHVTAVC-SQDASELVRK----LG----AD-DVIDYKSGSVEEQLKSLKPF 249 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHH----TT----CS-EEEETTSSCHHHHHHTSCCB
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEe-ChHHHHHHHH----cC----CC-EEEECCchHHHHHHhhcCCC
Confidence 45688999999 45 488888877764 34899998 6666666643 22 11 12221111110 011468
Q ss_pred ceEEeccccccCCChHHHHHHHHHhccCCcEEEEEE
Q 019957 239 DAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 239 D~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 274 (333)
|+|+-.. ..+...+....+.|++||+++...
T Consensus 250 D~vid~~-----g~~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 250 DFILDNV-----GGSTETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp SEEEESS-----CTTHHHHGGGGBCSSSCCEEEESC
T ss_pred CEEEECC-----CChhhhhHHHHHhhcCCcEEEEeC
Confidence 9887543 233344677788899999998754
No 424
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=88.73 E-value=2.4 Score=38.05 Aligned_cols=98 Identities=17% Similarity=0.100 Sum_probs=58.6
Q ss_pred hcccCCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCC---CC-CCC-C
Q 019957 162 FKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVC---RL-PFA-S 235 (333)
Q Consensus 162 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~---~l-p~~-~ 235 (333)
.+..++.+||=+|+|. |.++..+++...+.+|+++|.++..++.+++. | .-.++...-. .+ ... .
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~l----G-----a~~vi~~~~~~~~~v~~~~~g 252 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERL----G-----ADHVVDARRDPVKQVMELTRG 252 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHT----T-----CSEEEETTSCHHHHHHHHTTT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHh----C-----CCEEEeccchHHHHHHHHhCC
Confidence 4556788999999864 66777776653134899999999888887652 1 1122221111 00 011 2
Q ss_pred CCcceEEeccccccCCChH-HHHHHHHHhccCCcEEEEEEe
Q 019957 236 GFVDAVHAGAALHCWPSPS-NAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~-~~l~~~~r~LkpgG~l~i~~~ 275 (333)
..+|+|+-.- ..+. ..+....+. +||++++...
T Consensus 253 ~g~Dvvid~~-----G~~~~~~~~~~~~~--~~G~~v~~g~ 286 (359)
T 1h2b_A 253 RGVNVAMDFV-----GSQATVDYTPYLLG--RMGRLIIVGY 286 (359)
T ss_dssp CCEEEEEESS-----CCHHHHHHGGGGEE--EEEEEEECCC
T ss_pred CCCcEEEECC-----CCchHHHHHHHhhc--CCCEEEEEeC
Confidence 2699987543 2222 145666666 8999887653
No 425
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=88.71 E-value=4.1 Score=41.92 Aligned_cols=71 Identities=20% Similarity=0.232 Sum_probs=51.0
Q ss_pred CCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCC----------------
Q 019957 167 GGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR---------------- 230 (333)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~---------------- 230 (333)
..++||+-||.|.++.-+...|....+.++|+++.+.+.-+.+ .++..++.+|+..
T Consensus 540 ~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N--------~p~~~~~~~DI~~l~~~~~~~di~~~~~~ 611 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLN--------NPGSTVFTEDCNILLKLVMAGETTNSRGQ 611 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHH--------CTTSEEECSCHHHHHHHHHHTCSBCTTCC
T ss_pred CCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHh--------CCCCccccccHHHHhhhccchhhhhhhhh
Confidence 4579999999999999999887423688999999988877765 3455566555421
Q ss_pred -CCCCCCCcceEEeccc
Q 019957 231 -LPFASGFVDAVHAGAA 246 (333)
Q Consensus 231 -lp~~~~~fD~V~~~~v 246 (333)
+| ..+.+|+|+...-
T Consensus 612 ~lp-~~~~vDll~GGpP 627 (1002)
T 3swr_A 612 RLP-QKGDVEMLCGGPP 627 (1002)
T ss_dssp BCC-CTTTCSEEEECCC
T ss_pred hcc-cCCCeeEEEEcCC
Confidence 12 1347899987543
No 426
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=88.66 E-value=0.79 Score=40.66 Aligned_cols=95 Identities=12% Similarity=0.099 Sum_probs=59.3
Q ss_pred ccCCC-eEEEEcC-C-cCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEc-cC--CCC-CCCCC
Q 019957 164 SAQGG-LLVDVSC-G-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRA-DV--CRL-PFASG 236 (333)
Q Consensus 164 ~~~~~-~vLDiGc-G-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~-d~--~~l-p~~~~ 236 (333)
..++. +||-+|+ | .|.++..+++.. +.++++++.+++.++.+++. | . . .++.. +. ... ....+
T Consensus 147 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~l----G---a-~-~v~~~~~~~~~~~~~~~~~ 216 (330)
T 1tt7_A 147 LSPEKGSVLVTGATGGVGGIAVSMLNKR-GYDVVASTGNREAADYLKQL----G---A-S-EVISREDVYDGTLKALSKQ 216 (330)
T ss_dssp CCGGGCCEEEESTTSHHHHHHHHHHHHH-TCCEEEEESSSSTHHHHHHH----T---C-S-EEEEHHHHCSSCCCSSCCC
T ss_pred cCCCCceEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc----C---C-c-EEEECCCchHHHHHHhhcC
Confidence 34454 8999997 4 477777777653 24899999988777777652 1 1 1 12211 11 111 12234
Q ss_pred CcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 237 FVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 237 ~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
.+|+|+-... . ..+....+.|++||++++...
T Consensus 217 ~~d~vid~~g-----~--~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 217 QWQGAVDPVG-----G--KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp CEEEEEESCC-----T--HHHHHHHTTEEEEEEEEECCC
T ss_pred CccEEEECCc-----H--HHHHHHHHhhcCCCEEEEEec
Confidence 6898875432 2 358889999999999987643
No 427
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=88.46 E-value=0.13 Score=34.94 Aligned_cols=31 Identities=23% Similarity=0.694 Sum_probs=22.0
Q ss_pred CeecccCCCccccccCCCCccccccccCceeeCCCCcccc
Q 019957 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYS 98 (333)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~ 98 (333)
....||.|+..-..... .+++.|..|+..+.
T Consensus 26 ~ky~C~fCgk~~vkR~a---------~GIW~C~~C~~~~A 56 (73)
T 1ffk_W 26 KKYKCPVCGFPKLKRAS---------TSIWVCGHCGYKIA 56 (73)
T ss_pred cCccCCCCCCceeEEEE---------eEEEECCCCCcEEE
Confidence 45689999984333221 37999999998863
No 428
>1wii_A Hypothetical UPF0222 protein MGC4549; domain of unknown function, zinc finger, metal-binding protein, structural genomics; NMR {Mus musculus} SCOP: g.41.3.4
Probab=88.43 E-value=0.13 Score=36.06 Aligned_cols=42 Identities=17% Similarity=0.336 Sum_probs=26.0
Q ss_pred cccCeecccCCCccccccCCCCccccccccCceeeCCCCccccCc
Q 019957 56 LEGDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSK 100 (333)
Q Consensus 56 ~~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~ 100 (333)
-....|.||.|++.-.....-. .....+.+.|..||..|...
T Consensus 19 ~L~t~F~CPfCnh~~sV~vkid---k~~~~g~l~C~~Cg~~~~~~ 60 (85)
T 1wii_A 19 TLETQFTCPFCNHEKSCDVKMD---RARNTGVISCTVCLEEFQTP 60 (85)
T ss_dssp CCSSCCCCTTTCCSSCEEEEEE---TTTTEEEEEESSSCCEEEEE
T ss_pred CCCCeEcCCCCCCCCeEEEEEE---ccCCEEEEEcccCCCeEEec
Confidence 3557899999999631111000 01113689999999988553
No 429
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=88.42 E-value=3.8 Score=35.56 Aligned_cols=104 Identities=12% Similarity=0.164 Sum_probs=67.2
Q ss_pred CCCeEEEEcCCc----C-HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-----C--
Q 019957 166 QGGLLVDVSCGS----G-LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----F-- 233 (333)
Q Consensus 166 ~~~~vLDiGcG~----G-~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~-- 233 (333)
.++++|=.|++. | .++..|++.+. +|+.++.++...+.+.+.... ..++.++.+|+.+.. +
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~ 102 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGA--ELAFTYQGDALKKRVEPLAEE-----LGAFVAGHCDVADAASIDAVFET 102 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTC--EEEEEECSHHHHHHHHHHHHH-----HTCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHh-----cCCceEEECCCCCHHHHHHHHHH
Confidence 467899999763 3 35667777765 899999987655555554444 236788999997642 1
Q ss_pred ---CCCCcceEEecccccc----C-----CCh--------------HHHHHHHHHhccCCcEEEEEEec
Q 019957 234 ---ASGFVDAVHAGAALHC----W-----PSP--------------SNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 234 ---~~~~fD~V~~~~vl~h----~-----~d~--------------~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
.-+..|+++.+..+.. . .+. ..+++.+...++.+|.++.....
T Consensus 103 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~ 171 (293)
T 3grk_A 103 LEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYY 171 (293)
T ss_dssp HHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECG
T ss_pred HHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeh
Confidence 0147899998765432 0 111 13456666777788988876643
No 430
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=88.19 E-value=0.23 Score=33.58 Aligned_cols=32 Identities=31% Similarity=0.676 Sum_probs=23.1
Q ss_pred eecccCCCccccccCCCCccccccccCceeeCCCCccccCcCC
Q 019957 60 LFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSKDN 102 (333)
Q Consensus 60 ~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~g 102 (333)
.+.|| |+..+...... ....|+ ||......+.
T Consensus 4 vv~C~-C~~~~~~~~~~---------kT~~C~-CG~~~~~~k~ 35 (71)
T 1gh9_A 4 IFRCD-CGRALYSREGA---------KTRKCV-CGRTVNVKDR 35 (71)
T ss_dssp EEEET-TSCCEEEETTC---------SEEEET-TTEEEECCSS
T ss_pred EEECC-CCCEEEEcCCC---------cEEECC-CCCeeeeceE
Confidence 57899 99976554431 477899 9998866653
No 431
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=87.89 E-value=2.7 Score=38.22 Aligned_cols=112 Identities=8% Similarity=0.040 Sum_probs=70.7
Q ss_pred HHHHHhhccc-CCCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCC
Q 019957 156 KMAQEYFKSA-QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA 234 (333)
Q Consensus 156 ~~~~~~l~~~-~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~ 234 (333)
+++.+.+... .+++||.|+-+.|.++..++... ++.+.=|--.....+.++..+++. ...+.+... .+.+
T Consensus 27 ~~ll~~~~~~~~~~~~~~~~d~~gal~~~~~~~~----~~~~~ds~~~~~~~~~n~~~~~~~-~~~~~~~~~-~~~~--- 97 (375)
T 4dcm_A 27 EYLLQQLDDTEIRGPVLILNDAFGALSCALAEHK----PYSIGDSYISELATRENLRLNGID-ESSVKFLDS-TADY--- 97 (375)
T ss_dssp HHHHHTTTTCCCCSCEEEECCSSSHHHHHTGGGC----CEEEESCHHHHHHHHHHHHHTTCC-GGGSEEEET-TSCC---
T ss_pred HHHHHhhhhccCCCCEEEECCCCCHHHHhhccCC----ceEEEhHHHHHHHHHHHHHHcCCC-ccceEeccc-cccc---
Confidence 4555554432 45689999999999998887553 344432666666667777777641 223555432 2333
Q ss_pred CCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEecc
Q 019957 235 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
.+.||+|+.... .+.......|..+...|++|+.+++...+.
T Consensus 98 ~~~~~~v~~~lp-k~~~~l~~~L~~l~~~l~~~~~i~~~g~~~ 139 (375)
T 4dcm_A 98 PQQPGVVLIKVP-KTLALLEQQLRALRKVVTSDTRIIAGAKAR 139 (375)
T ss_dssp CSSCSEEEEECC-SCHHHHHHHHHHHHTTCCTTSEEEEEEEGG
T ss_pred ccCCCEEEEEcC-CCHHHHHHHHHHHHhhCCCCCEEEEEeccc
Confidence 357999886332 222223456788888999999998877554
No 432
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=87.79 E-value=0.81 Score=40.57 Aligned_cols=95 Identities=13% Similarity=0.090 Sum_probs=58.5
Q ss_pred ccCCC-eEEEEcC-C-cCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEc-cC-CC-C-CCCCC
Q 019957 164 SAQGG-LLVDVSC-G-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRA-DV-CR-L-PFASG 236 (333)
Q Consensus 164 ~~~~~-~vLDiGc-G-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~-d~-~~-l-p~~~~ 236 (333)
..++. +||-+|+ | .|.++..+++.. +.++++++.++..++.+++. | . . .++.. +. .+ . ....+
T Consensus 146 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~l----G---a-~-~~i~~~~~~~~~~~~~~~~ 215 (328)
T 1xa0_A 146 LTPERGPVLVTGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRVL----G---A-K-EVLAREDVMAERIRPLDKQ 215 (328)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHHT----T---C-S-EEEECC---------CCSC
T ss_pred CCCCCceEEEecCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHc----C---C-c-EEEecCCcHHHHHHHhcCC
Confidence 34454 8999997 3 478888887764 34899999988777777652 1 1 1 11111 11 00 1 11234
Q ss_pred CcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 237 FVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 237 ~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
.+|+|+-... . ..+....+.|++||++++...
T Consensus 216 ~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 216 RWAAAVDPVG-----G--RTLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp CEEEEEECST-----T--TTHHHHHHTEEEEEEEEECSC
T ss_pred cccEEEECCc-----H--HHHHHHHHhhccCCEEEEEee
Confidence 6898875432 2 247788899999999987643
No 433
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=87.79 E-value=0.37 Score=43.88 Aligned_cols=102 Identities=16% Similarity=0.182 Sum_probs=54.4
Q ss_pred cCCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEe
Q 019957 165 AQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (333)
Q Consensus 165 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 243 (333)
.++.+|+=+|+|. |.......... +.+|+++|.++..++.+.+.. + ..+.....+...+.-.-..+|+|+.
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~~-Ga~V~~~d~~~~~~~~~~~~~---g----~~~~~~~~~~~~l~~~~~~~DvVi~ 235 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALGM-GAQVTILDVNHKRLQYLDDVF---G----GRVITLTATEANIKKSVQHADLLIG 235 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHT---T----TSEEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHhc---C----ceEEEecCCHHHHHHHHhCCCEEEE
Confidence 3467999999864 54444444332 339999999998777665432 1 1222211111111100125798876
Q ss_pred ccccccCCChHHHHHHHHHhccCCcEEEEEE
Q 019957 244 GAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 244 ~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 274 (333)
.........+.-+.+++.+.+|+||+++...
T Consensus 236 ~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 236 AVLVPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp CCC-------CCSCHHHHTTSCTTCEEEECC
T ss_pred CCCCCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 5433221111112466778889999887654
No 434
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=87.35 E-value=1.6 Score=34.30 Aligned_cols=32 Identities=9% Similarity=0.166 Sum_probs=29.7
Q ss_pred CCeEEEEcCCcCHHHHHHHHhCCCCeEEEEeC
Q 019957 167 GGLLVDVSCGSGLFSRKFAKSGTYSGVVALDF 198 (333)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~ 198 (333)
.+-|||+|-|+|..-..+.+..|+.+++++|.
T Consensus 41 ~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR 72 (174)
T 3iht_A 41 SGPVYELGLGNGRTYHHLRQHVQGREIYVFER 72 (174)
T ss_dssp CSCEEEECCTTCHHHHHHHHHCCSSCEEEEES
T ss_pred CCceEEecCCCChhHHHHHHhCCCCcEEEEEe
Confidence 45899999999999999999999999999995
No 435
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=87.23 E-value=9.6 Score=31.41 Aligned_cols=75 Identities=20% Similarity=0.151 Sum_probs=47.4
Q ss_pred CCCeEEEEcCCcCHH----HHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCe-EEEEccCC-CCCCCCCCcc
Q 019957 166 QGGLLVDVSCGSGLF----SRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNL-ALVRADVC-RLPFASGFVD 239 (333)
Q Consensus 166 ~~~~vLDiGcG~G~~----~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i-~~~~~d~~-~lp~~~~~fD 239 (333)
.+.+||=.|+ +|.. +..|.+.+. +|++++.++..++.... .++ .++.+|+. .+.-.-+..|
T Consensus 20 ~~~~ilVtGa-tG~iG~~l~~~L~~~G~--~V~~~~R~~~~~~~~~~----------~~~~~~~~~Dl~~~~~~~~~~~D 86 (236)
T 3e8x_A 20 QGMRVLVVGA-NGKVARYLLSELKNKGH--EPVAMVRNEEQGPELRE----------RGASDIVVANLEEDFSHAFASID 86 (236)
T ss_dssp -CCEEEEETT-TSHHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHH----------TTCSEEEECCTTSCCGGGGTTCS
T ss_pred CCCeEEEECC-CChHHHHHHHHHHhCCC--eEEEEECChHHHHHHHh----------CCCceEEEcccHHHHHHHHcCCC
Confidence 4678998885 3433 445555554 99999998876544332 257 88999986 2221224789
Q ss_pred eEEeccccccCCCh
Q 019957 240 AVHAGAALHCWPSP 253 (333)
Q Consensus 240 ~V~~~~vl~h~~d~ 253 (333)
+|+.........++
T Consensus 87 ~vi~~ag~~~~~~~ 100 (236)
T 3e8x_A 87 AVVFAAGSGPHTGA 100 (236)
T ss_dssp EEEECCCCCTTSCH
T ss_pred EEEECCCCCCCCCc
Confidence 99987765544444
No 436
>3po3_S Transcription elongation factor S-II; RNA polymerase II, mRNA, transcription, arrest, BACKTRACKING cleavage, transferase-DNA-RNA complex; HET: DNA BRU EPE PGE; 3.30A {Saccharomyces cerevisiae} PDB: 1y1v_S 1y1y_S 3gtm_S* 1enw_A
Probab=87.22 E-value=0.41 Score=38.73 Aligned_cols=41 Identities=20% Similarity=0.352 Sum_probs=24.3
Q ss_pred cCeecccCCCccccccC-CCCccccccccCceeeCCCCcccc
Q 019957 58 GDLFSCPICYEPLIRKG-PTGLTLGAIYRSGFKCRKCDKTYS 98 (333)
Q Consensus 58 ~~~l~CP~C~~~l~~~~-~~~~~~~~~~~~~~~C~~C~~~~~ 98 (333)
...+.||.|++.-.... ....+..+-..-.+.|.+||+.|.
T Consensus 135 t~~~~Cp~C~~~~a~~~q~Q~rsaDE~mt~f~~C~~C~~~w~ 176 (178)
T 3po3_S 135 TDRFTCGKCKEKKVSYYQLQTRSAAAPLTTFCTCEACGNRWK 176 (178)
T ss_dssp BSSSCCSSSCCSCEECCCCCCSCTTSCCCCCEEETTTCCEEC
T ss_pred cCCcCCCCCCCCceEEEEeecccCCCCCcEEEEcCCCCCeec
Confidence 46789999998432111 111112223345789999999873
No 437
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=86.58 E-value=0.2 Score=45.71 Aligned_cols=97 Identities=19% Similarity=0.134 Sum_probs=57.1
Q ss_pred CCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccC----------------
Q 019957 166 QGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV---------------- 228 (333)
Q Consensus 166 ~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~---------------- 228 (333)
++.+|+=+|+|. |.....++... +.+|+++|.++..++.+.+. +..++..+.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~~l----------Ga~~~~l~~~~~~~~gya~~~~~~~ 251 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL-GAKTTGYDVRPEVAEQVRSV----------GAQWLDLGIDAAGEGGYARELSEAE 251 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH-TCEEEEECSSGGGHHHHHHT----------TCEECCCC-------------CHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc----------CCeEEeccccccccccchhhhhHHH
Confidence 577999999986 66555444432 33899999999877777652 122221110
Q ss_pred -----CCCCCCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEE
Q 019957 229 -----CRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGT 273 (333)
Q Consensus 229 -----~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~ 273 (333)
..+.-.-...|+|+....+..-..|.-+-+++.+.+|||++++-.
T Consensus 252 ~~~~~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDv 301 (381)
T 3p2y_A 252 RAQQQQALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDL 301 (381)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEET
T ss_pred HhhhHHHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEE
Confidence 001001247899987532322122322346888889998877654
No 438
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=85.91 E-value=4.5 Score=35.25 Aligned_cols=78 Identities=26% Similarity=0.258 Sum_probs=55.9
Q ss_pred cCCCeEEEEcCCcC---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-----CC--
Q 019957 165 AQGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA-- 234 (333)
Q Consensus 165 ~~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~-- 234 (333)
..+.+||=.|++.| .++..|++.|. +|++++.++..++...+.+... ..++.++.+|+.+.. +.
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dv~d~~~v~~~~~~~ 102 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGA--RLVLSDVDQPALEQAVNGLRGQ----GFDAHGVVCDVRHLDEMVRLADEA 102 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc----CCceEEEEccCCCHHHHHHHHHHH
Confidence 34678998988765 35566666665 8999999998888877766654 347889999997742 00
Q ss_pred ---CCCcceEEeccccc
Q 019957 235 ---SGFVDAVHAGAALH 248 (333)
Q Consensus 235 ---~~~fD~V~~~~vl~ 248 (333)
.+..|+++.+..+.
T Consensus 103 ~~~~g~id~lvnnAg~~ 119 (301)
T 3tjr_A 103 FRLLGGVDVVFSNAGIV 119 (301)
T ss_dssp HHHHSSCSEEEECCCCC
T ss_pred HHhCCCCCEEEECCCcC
Confidence 13789999876543
No 439
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=85.90 E-value=7.1 Score=33.72 Aligned_cols=104 Identities=16% Similarity=0.221 Sum_probs=64.8
Q ss_pred CCCeEEEEcCCcC---HHHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-----CC--
Q 019957 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSEN-MLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA-- 234 (333)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~D~s~~-~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~-- 234 (333)
.++++|=.|++.| .++..|++.|. +|+.++.+.. ..+...+..+.. ..++.++.+|+.+.. +.
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~ 119 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGA--NIAIAYLDEEGDANETKQYVEKE----GVKCVLLPGDLSDEQHCKDIVQET 119 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHTT----TCCEEEEESCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHHHH
Confidence 4668898887665 34556666665 8999998765 344444444433 457889999997642 10
Q ss_pred ---CCCcceEEeccccccCC------Ch--------------HHHHHHHHHhccCCcEEEEEEe
Q 019957 235 ---SGFVDAVHAGAALHCWP------SP--------------SNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 235 ---~~~fD~V~~~~vl~h~~------d~--------------~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
-+..|+++.+....+.. +. ..+++.+.+.++.+|.++....
T Consensus 120 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS 183 (291)
T 3ijr_A 120 VRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTAS 183 (291)
T ss_dssp HHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECC
T ss_pred HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEec
Confidence 13689998765443211 11 1345666777788888777653
No 440
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=85.83 E-value=0.42 Score=44.00 Aligned_cols=98 Identities=17% Similarity=0.164 Sum_probs=58.5
Q ss_pred CCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCC-------------CC
Q 019957 166 QGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVC-------------RL 231 (333)
Q Consensus 166 ~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~-------------~l 231 (333)
++.+|+=+|+|. |.....++... +.+|+++|.++..++.+++. +..++..+.. .+
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~~~----------G~~~~~~~~~~~~d~~~~~~ya~e~ 257 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL-GAVVSATDVRPAAKEQVASL----------GAKFIAVEDEEFKAAETAGGYAKEM 257 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSTTHHHHHHHT----------TCEECCCCC----------------
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHc----------CCceeecccccccccccccchhhhc
Confidence 578999999996 66665555543 34999999999887777652 1222211110 00
Q ss_pred C----------C--CCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEE
Q 019957 232 P----------F--ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 232 p----------~--~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 274 (333)
+ + .-...|+|+....+.--..|.-+-+++.+.+|||.+++-..
T Consensus 258 s~~~~~~~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 258 SGEYQVKQAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLA 312 (405)
T ss_dssp -CHHHHHHHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETT
T ss_pred chhhhhhhHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEe
Confidence 0 0 01357999865433322233333468888899988877643
No 441
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=85.73 E-value=3.2 Score=37.43 Aligned_cols=93 Identities=8% Similarity=0.005 Sum_probs=58.5
Q ss_pred cCCCeEEEEcC-C-cCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-----CCCCC
Q 019957 165 AQGGLLVDVSC-G-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FASGF 237 (333)
Q Consensus 165 ~~~~~vLDiGc-G-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~~~~ 237 (333)
.++.+||=+|+ | .|.++..+++.. +.+|+++. ++..++.+++. | --.++...-.++. ..++.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~-Ga~Vi~~~-~~~~~~~~~~l----G-----a~~vi~~~~~~~~~~v~~~t~g~ 231 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS-GYIPIATC-SPHNFDLAKSR----G-----AEEVFDYRAPNLAQTIRTYTKNN 231 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHHT----T-----CSEEEETTSTTHHHHHHHHTTTC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC-CCEEEEEe-CHHHHHHHHHc----C-----CcEEEECCCchHHHHHHHHccCC
Confidence 56789999998 3 588888888774 44888885 77777766652 1 1123322111110 11345
Q ss_pred cceEEeccccccCCChHHHHHHHHHhc-cCCcEEEEEE
Q 019957 238 VDAVHAGAALHCWPSPSNAVAEISRIL-RSGGVFVGTT 274 (333)
Q Consensus 238 fD~V~~~~vl~h~~d~~~~l~~~~r~L-kpgG~l~i~~ 274 (333)
+|+|+-.-. . ...+..+.+.| ++||+++...
T Consensus 232 ~d~v~d~~g-----~-~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 232 LRYALDCIT-----N-VESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp CCEEEESSC-----S-HHHHHHHHHHSCTTCEEEEESS
T ss_pred ccEEEECCC-----c-hHHHHHHHHHhhcCCCEEEEEe
Confidence 898875322 2 24577788888 6999988754
No 442
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=85.37 E-value=5.7 Score=34.00 Aligned_cols=104 Identities=20% Similarity=0.195 Sum_probs=67.1
Q ss_pred CCCeEEEEcCCcC---HHHHHHHHhCCCCeEEEEeCC------------HHHHHHHHHHHHhcCcCCCCCeEEEEccCCC
Q 019957 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFS------------ENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (333)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~D~s------------~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (333)
.++++|=.|++.| .++..|++.|. +|+.+|.+ ...++.....+... ..++.++.+|+.+
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~ 82 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGA--DIILFDICHDIETNEYPLATSRDLEEAGLEVEKT----GRKAYTAEVDVRD 82 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT----TSCEEEEECCTTC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--eEEEEcccccccccccchhhhHHHHHHHHHHHhc----CCceEEEEccCCC
Confidence 4668898887665 34556666665 89999987 66666655555443 4578899999976
Q ss_pred CC-----CC-----CCCcceEEeccccccCC---Ch--------------HHHHHHHHHhccCCcEEEEEEe
Q 019957 231 LP-----FA-----SGFVDAVHAGAALHCWP---SP--------------SNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 231 lp-----~~-----~~~fD~V~~~~vl~h~~---d~--------------~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
.. +. -+..|+++.+..+.... +. ..+++.+...++.+|.++....
T Consensus 83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 154 (287)
T 3pxx_A 83 RAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGS 154 (287)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEecc
Confidence 42 10 13789999876653321 11 1245666677778888777653
No 443
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=85.17 E-value=0.43 Score=29.90 Aligned_cols=26 Identities=27% Similarity=0.484 Sum_probs=19.9
Q ss_pred CeecccCCCccccccCCCCccccccccCceeeCCCCccc
Q 019957 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (333)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~ 97 (333)
....||.|+..+. .+.+.|..||+..
T Consensus 13 ~k~iCpkC~a~~~-------------~gaw~CrKCG~~~ 38 (51)
T 3j21_g 13 KKYVCLRCGATNP-------------WGAKKCRKCGYKR 38 (51)
T ss_dssp SEEECTTTCCEEC-------------TTCSSCSSSSSCC
T ss_pred CCccCCCCCCcCC-------------CCceecCCCCCcc
Confidence 4567999999732 2689999998763
No 444
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=85.11 E-value=5.8 Score=31.46 Aligned_cols=91 Identities=13% Similarity=0.166 Sum_probs=55.6
Q ss_pred CCeEEEEcCCc-CH-HHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC----C-CCCCc
Q 019957 167 GGLLVDVSCGS-GL-FSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----F-ASGFV 238 (333)
Q Consensus 167 ~~~vLDiGcG~-G~-~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp----~-~~~~f 238 (333)
+.+|+=+|+|. |. ++..|.+. +. +|+++|.++..++.+++ .++.++.+|..+.. . .-..+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~--~V~vid~~~~~~~~~~~----------~g~~~~~gd~~~~~~l~~~~~~~~a 106 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGK--ISLGIEIREEAAQQHRS----------EGRNVISGDATDPDFWERILDTGHV 106 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCS--CEEEEESCHHHHHHHHH----------TTCCEEECCTTCHHHHHTBCSCCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCC--eEEEEECCHHHHHHHHH----------CCCCEEEcCCCCHHHHHhccCCCCC
Confidence 55899999875 53 44555666 65 89999999987766553 13456677765421 1 13468
Q ss_pred ceEEeccccccCCChH--HHHHHHHHhccCCcEEEEEE
Q 019957 239 DAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 239 D~V~~~~vl~h~~d~~--~~l~~~~r~LkpgG~l~i~~ 274 (333)
|+|+... ++.. ..+-...+.+.|++.++...
T Consensus 107 d~vi~~~-----~~~~~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 107 KLVLLAM-----PHHQGNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp CEEEECC-----SSHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred CEEEEeC-----CChHHHHHHHHHHHHHCCCCEEEEEE
Confidence 8888642 2222 22333455566777777654
No 445
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=84.93 E-value=5.6 Score=29.97 Aligned_cols=90 Identities=17% Similarity=0.135 Sum_probs=54.1
Q ss_pred CCeEEEEcCCc-CH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC----CCCCCcce
Q 019957 167 GGLLVDVSCGS-GL-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----FASGFVDA 240 (333)
Q Consensus 167 ~~~vLDiGcG~-G~-~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp----~~~~~fD~ 240 (333)
..+|+=+|+|. |. ++..|.+.+. +|+++|.++..++.+++ .++.++.+|..+.. ..-..+|+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~--~V~~id~~~~~~~~~~~----------~~~~~~~gd~~~~~~l~~~~~~~~d~ 73 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGK--KVLAVDKSKEKIELLED----------EGFDAVIADPTDESFYRSLDLEGVSA 73 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC--CEEEEESCHHHHHHHHH----------TTCEEEECCTTCHHHHHHSCCTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC--eEEEEECCHHHHHHHHH----------CCCcEEECCCCCHHHHHhCCcccCCE
Confidence 34789999875 43 3445555554 89999999988776654 24677888886532 11246888
Q ss_pred EEeccccccCCChH--HHHHHHHHhccCCcEEEEEE
Q 019957 241 VHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 241 V~~~~vl~h~~d~~--~~l~~~~r~LkpgG~l~i~~ 274 (333)
|+.... +.. ..+....+.+. ...++...
T Consensus 74 vi~~~~-----~~~~n~~~~~~a~~~~-~~~iia~~ 103 (141)
T 3llv_A 74 VLITGS-----DDEFNLKILKALRSVS-DVYAIVRV 103 (141)
T ss_dssp EEECCS-----CHHHHHHHHHHHHHHC-CCCEEEEE
T ss_pred EEEecC-----CHHHHHHHHHHHHHhC-CceEEEEE
Confidence 876432 222 22334444455 45555544
No 446
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=84.78 E-value=0.94 Score=33.66 Aligned_cols=41 Identities=12% Similarity=0.226 Sum_probs=23.6
Q ss_pred cCeecccCCCccccc-cCCCCccccccccCceeeCCCCcccc
Q 019957 58 GDLFSCPICYEPLIR-KGPTGLTLGAIYRSGFKCRKCDKTYS 98 (333)
Q Consensus 58 ~~~l~CP~C~~~l~~-~~~~~~~~~~~~~~~~~C~~C~~~~~ 98 (333)
.....||.|++.-.. ......+..+-..-.+.|.+||+.+.
T Consensus 70 ~~~~~Cp~C~~~~a~~~q~q~rsade~mt~fy~C~~C~~~w~ 111 (113)
T 3h0g_I 70 RSDKECPRCHQHEAVFYQTHSRRGDTMMTLIYVCVHCGFAFE 111 (113)
T ss_dssp BCCSCCSSSCCSCEEEECCCCSSCCCCCCCEEEESSSCCCCC
T ss_pred CcccCCCCCCCceEEEEEEecccCCCCCeeEEEcCCCCCEEe
Confidence 344889999984211 11111122223345789999999874
No 447
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=84.64 E-value=7.7 Score=32.83 Aligned_cols=105 Identities=15% Similarity=0.230 Sum_probs=62.7
Q ss_pred CCeEEEEcCCcC---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-----CC----
Q 019957 167 GGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA---- 234 (333)
Q Consensus 167 ~~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~---- 234 (333)
+.++|=.|++.| .++..|.+.|. +|++++.++...+...+.+..... ..++.++.+|+.+.. +.
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (267)
T 2gdz_A 7 GKVALVTGAAQGIGRAFAEALLLKGA--KVALVDWNLEAGVQCKAALHEQFE--PQKTLFIQCDVADQQQLRDTFRKVVD 82 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHTTTSC--GGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhhcC--CCceEEEecCCCCHHHHHHHHHHHHH
Confidence 557888886554 34555666665 899999998766655544433110 235788899987642 10
Q ss_pred -CCCcceEEeccccccCCChHH-----------HHHHHHHhccC-----CcEEEEEEe
Q 019957 235 -SGFVDAVHAGAALHCWPSPSN-----------AVAEISRILRS-----GGVFVGTTF 275 (333)
Q Consensus 235 -~~~fD~V~~~~vl~h~~d~~~-----------~l~~~~r~Lkp-----gG~l~i~~~ 275 (333)
-+..|+++.+..+....+... ..+.+.+.++. +|.++....
T Consensus 83 ~~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS 140 (267)
T 2gdz_A 83 HFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSS 140 (267)
T ss_dssp HHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred HcCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCC
Confidence 135799998776544444432 23444455543 577766553
No 448
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=84.40 E-value=6.1 Score=35.29 Aligned_cols=96 Identities=9% Similarity=0.009 Sum_probs=52.7
Q ss_pred hcccCCCeEEEEcC-C-cCHHHHHHHHhCCCCeEE-EEeCCHH---HHHHHHHHHHhcCcCCCCCeEEEEc------cCC
Q 019957 162 FKSAQGGLLVDVSC-G-SGLFSRKFAKSGTYSGVV-ALDFSEN---MLRQCYDFIKQDNTILTSNLALVRA------DVC 229 (333)
Q Consensus 162 l~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~~v~-g~D~s~~---~~~~a~~~~~~~~~~~~~~i~~~~~------d~~ 229 (333)
....++.+||-+|+ | .|.++..+++.. +.+++ .++.++. ..+.+++ .| --.++.. ++.
T Consensus 163 ~~~~~g~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~~~~----lG-----a~~vi~~~~~~~~~~~ 232 (357)
T 1zsy_A 163 EQLQPGDSVIQNASNSGVGQAVIQIAAAL-GLRTINVVRDRPDIQKLSDRLKS----LG-----AEHVITEEELRRPEMK 232 (357)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEECCCSCHHHHHHHHHH----TT-----CSEEEEHHHHHSGGGG
T ss_pred hccCCCCEEEEeCCcCHHHHHHHHHHHHc-CCEEEEEecCccchHHHHHHHHh----cC-----CcEEEecCcchHHHHH
Confidence 34567889999997 4 488888888764 23554 4444432 2344433 22 1122221 111
Q ss_pred CCCCCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEE
Q 019957 230 RLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 230 ~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 274 (333)
++--..+.+|+|+-.- ..+ .+.+..+.|++||++++..
T Consensus 233 ~~~~~~~~~Dvvid~~-----g~~--~~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 233 NFFKDMPQPRLALNCV-----GGK--SSTELLRQLARGGTMVTYG 270 (357)
T ss_dssp GTTSSSCCCSEEEESS-----CHH--HHHHHHTTSCTTCEEEECC
T ss_pred HHHhCCCCceEEEECC-----CcH--HHHHHHHhhCCCCEEEEEe
Confidence 1110111489887532 222 2346789999999998763
No 449
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=84.40 E-value=0.76 Score=30.15 Aligned_cols=32 Identities=16% Similarity=0.390 Sum_probs=24.1
Q ss_pred cCeecccCCCccccccCCCCccccccccCceeeCCCCccccC
Q 019957 58 GDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSS 99 (333)
Q Consensus 58 ~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~ 99 (333)
...+.|..|+........ ..++|+.||+.-..
T Consensus 19 ~v~Y~C~~Cg~~~~l~~~----------~~iRC~~CG~RILy 50 (63)
T 3h0g_L 19 TMIYLCADCGARNTIQAK----------EVIRCRECGHRVMY 50 (63)
T ss_dssp CCCCBCSSSCCBCCCCSS----------SCCCCSSSCCCCCB
T ss_pred CeEEECCCCCCeeecCCC----------CceECCCCCcEEEE
Confidence 567999999997754422 47999999987543
No 450
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=84.33 E-value=0.81 Score=34.00 Aligned_cols=38 Identities=18% Similarity=0.292 Sum_probs=26.1
Q ss_pred eecccCCCccccccCCCCccccccccCceeeCCCCccccCcCC
Q 019957 60 LFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSKDN 102 (333)
Q Consensus 60 ~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~g 102 (333)
+.=||.|++-|......+. ....+.|.+|+..+...+.
T Consensus 4 m~FCp~Cgn~L~~~~~~~~-----~~~~~~C~~C~y~~~~~~~ 41 (113)
T 3h0g_I 4 FQYCIECNNMLYPREDKVD-----RVLRLACRNCDYSEIAATS 41 (113)
T ss_dssp CCCCSSSCCCCEECCCTTT-----CCCCEECSSSCCEECCSCS
T ss_pred ceeCcCCCCEeeEcccCCC-----CeeEEECCCCCCeEEcCCC
Confidence 3459999998866543211 1237999999998876654
No 451
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=83.92 E-value=9.7 Score=32.32 Aligned_cols=105 Identities=22% Similarity=0.252 Sum_probs=66.6
Q ss_pred CCCeEEEEcCCcC---HHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-----CC--
Q 019957 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDF-SENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA-- 234 (333)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~D~-s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~-- 234 (333)
.++++|=.|++.| .++..|++.|. +|+.++. +...++...+.+... ..++.++.+|+.+.. +.
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~ 90 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGA--KVVVNYANSTKDAEKVVSEIKAL----GSDAIAIKADIRQVPEIVKLFDQA 90 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT----TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHH
Confidence 4668888887654 24556666665 8888775 455555555555543 357889999997742 10
Q ss_pred ---CCCcceEEeccccccCCC-----h--------------HHHHHHHHHhccCCcEEEEEEec
Q 019957 235 ---SGFVDAVHAGAALHCWPS-----P--------------SNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 235 ---~~~fD~V~~~~vl~h~~d-----~--------------~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
-+..|+++.+..+.+... + ..+++.+.+.++++|.++.....
T Consensus 91 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~ 154 (270)
T 3is3_A 91 VAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSN 154 (270)
T ss_dssp HHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCT
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCc
Confidence 136899987665543221 1 13456677788888988876653
No 452
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=83.79 E-value=10 Score=28.12 Aligned_cols=90 Identities=9% Similarity=0.162 Sum_probs=51.6
Q ss_pred CeEEEEcCCc-CH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC----CCCCCcceE
Q 019957 168 GLLVDVSCGS-GL-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----FASGFVDAV 241 (333)
Q Consensus 168 ~~vLDiGcG~-G~-~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp----~~~~~fD~V 241 (333)
.+|+=+|+|. |. ++..|.+.+. +|+++|.++..++...+. .++.++.+|..+.. ..-..+|+|
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~--~v~~~d~~~~~~~~~~~~---------~~~~~~~~d~~~~~~l~~~~~~~~d~v 73 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGH--DIVLIDIDKDICKKASAE---------IDALVINGDCTKIKTLEDAGIEDADMY 73 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHH---------CSSEEEESCTTSHHHHHHTTTTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHh---------cCcEEEEcCCCCHHHHHHcCcccCCEE
Confidence 4788888865 43 3344555554 899999998876655431 13556677764321 112468988
Q ss_pred EeccccccCCChHHHHHHHHHhccCCcEEEE
Q 019957 242 HAGAALHCWPSPSNAVAEISRILRSGGVFVG 272 (333)
Q Consensus 242 ~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i 272 (333)
+...--. .....+..+.+.++++ .+++
T Consensus 74 i~~~~~~---~~~~~~~~~~~~~~~~-~ii~ 100 (140)
T 1lss_A 74 IAVTGKE---EVNLMSSLLAKSYGIN-KTIA 100 (140)
T ss_dssp EECCSCH---HHHHHHHHHHHHTTCC-CEEE
T ss_pred EEeeCCc---hHHHHHHHHHHHcCCC-EEEE
Confidence 8753211 1123445556667775 4444
No 453
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=83.65 E-value=5.9 Score=33.57 Aligned_cols=106 Identities=21% Similarity=0.245 Sum_probs=69.9
Q ss_pred CCCeEEEEcC----CcCH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-----C--
Q 019957 166 QGGLLVDVSC----GSGL-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----F-- 233 (333)
Q Consensus 166 ~~~~vLDiGc----G~G~-~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~-- 233 (333)
.++++|=-|+ |.|. .+..|++.|. +|+..|.++..++.+.+.+++.+ ..++.++.+|+.+.. +
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga--~Vvi~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~ 79 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA--KLVFTYRKERSRKELEKLLEQLN---QPEAHLYQIDVQSDEEVINGFEQ 79 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHGGGT---CSSCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC---CCcEEEEEccCCCHHHHHHHHHH
Confidence 4778898885 3443 5667777776 99999999888888877776654 457888999987632 0
Q ss_pred ---CCCCcceEEeccccccCC---------ChH--------------HHHHHHHHhccCCcEEEEEEec
Q 019957 234 ---ASGFVDAVHAGAALHCWP---------SPS--------------NAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 234 ---~~~~fD~V~~~~vl~h~~---------d~~--------------~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
.-+..|+++.+..+.... +.. ...+.....++.+|.++.....
T Consensus 80 ~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~ 148 (256)
T 4fs3_A 80 IGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYL 148 (256)
T ss_dssp HHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECG
T ss_pred HHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecc
Confidence 125789888765432210 111 1223445667789998877643
No 454
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=83.54 E-value=17 Score=30.89 Aligned_cols=79 Identities=19% Similarity=0.190 Sum_probs=51.0
Q ss_pred CCCeEEEEcCCcC---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-----CC---
Q 019957 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA--- 234 (333)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~--- 234 (333)
.+.++|=.|++.| .++..|++.+. +|++++.++..++...+.+...+. ..++.++.+|+.+.. +.
T Consensus 31 ~~k~vlVTGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~ 106 (279)
T 1xg5_A 31 RDRLALVTGASGGIGAAVARALVQQGL--KVVGCARTVGNIEELAAECKSAGY--PGTLIPYRCDLSNEEDILSMFSAIR 106 (279)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTC--SSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEECChHHHHHHHHHHHhcCC--CceEEEEEecCCCHHHHHHHHHHHH
Confidence 3568888886543 24445555554 899999998777666665555431 245788889987642 10
Q ss_pred --CCCcceEEeccccc
Q 019957 235 --SGFVDAVHAGAALH 248 (333)
Q Consensus 235 --~~~fD~V~~~~vl~ 248 (333)
-+.+|+|+.+..+.
T Consensus 107 ~~~g~iD~vi~~Ag~~ 122 (279)
T 1xg5_A 107 SQHSGVDICINNAGLA 122 (279)
T ss_dssp HHHCCCSEEEECCCCC
T ss_pred HhCCCCCEEEECCCCC
Confidence 13689998766543
No 455
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=83.53 E-value=2.8 Score=39.56 Aligned_cols=90 Identities=12% Similarity=0.005 Sum_probs=55.6
Q ss_pred ccCCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEE
Q 019957 164 SAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVH 242 (333)
Q Consensus 164 ~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~ 242 (333)
..++.+|+=+|+|. |......++.. +.+|+++|.++..++.+.+. +..+ .++.+. -...|+|+
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~-Ga~Viv~d~~~~~~~~A~~~----------Ga~~--~~l~e~---l~~aDvVi 334 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQ-GARVSVTEIDPINALQAMME----------GFDV--VTVEEA---IGDADIVV 334 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHT----------TCEE--CCHHHH---GGGCSEEE
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc----------CCEE--ecHHHH---HhCCCEEE
Confidence 34688999999986 65555554443 34999999999877666541 2222 222221 13679988
Q ss_pred eccccccCCChHHHHHHHHHhccCCcEEEEEE
Q 019957 243 AGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 243 ~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 274 (333)
..-.-.++-+ .+..+.||+||+++...
T Consensus 335 ~atgt~~~i~-----~~~l~~mk~ggilvnvG 361 (494)
T 3ce6_A 335 TATGNKDIIM-----LEHIKAMKDHAILGNIG 361 (494)
T ss_dssp ECSSSSCSBC-----HHHHHHSCTTCEEEECS
T ss_pred ECCCCHHHHH-----HHHHHhcCCCcEEEEeC
Confidence 7533223211 25667789999887654
No 456
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=83.42 E-value=6.7 Score=33.13 Aligned_cols=105 Identities=9% Similarity=0.094 Sum_probs=65.0
Q ss_pred cCCCeEEEEcCC--cC---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-----C-
Q 019957 165 AQGGLLVDVSCG--SG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----F- 233 (333)
Q Consensus 165 ~~~~~vLDiGcG--~G---~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~- 233 (333)
..+++||=.|++ .| .++..|++.+. +|+.++.+....+..++.... ...+.++.+|+.+.. +
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~ 84 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGA--ELAFTYVGDRFKDRITEFAAE-----FGSELVFPCDVADDAQIDALFA 84 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHH-----TTCCCEEECCTTCHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCC--CEEEEecchhhHHHHHHHHHH-----cCCcEEEECCCCCHHHHHHHHH
Confidence 457789999965 33 24556666665 899999886555544444343 335788899997642 1
Q ss_pred ----CCCCcceEEeccccccC----------CCh--------------HHHHHHHHHhccCCcEEEEEEec
Q 019957 234 ----ASGFVDAVHAGAALHCW----------PSP--------------SNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 234 ----~~~~fD~V~~~~vl~h~----------~d~--------------~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
.-+..|+++.+..+.+. .++ ..+++.+...++++|.++.....
T Consensus 85 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~ 155 (271)
T 3ek2_A 85 SLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYL 155 (271)
T ss_dssp HHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECG
T ss_pred HHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEecc
Confidence 01478999987654331 111 12455566677778887776543
No 457
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=83.31 E-value=0.52 Score=43.42 Aligned_cols=43 Identities=21% Similarity=0.110 Sum_probs=31.7
Q ss_pred cCCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHH
Q 019957 165 AQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYD 208 (333)
Q Consensus 165 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~ 208 (333)
.++.+|+=+|+|. |.....+++.. +.+|+++|.++..++.+++
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~v~D~~~~~~~~~~~ 213 (401)
T 1x13_A 170 VPPAKVMVIGAGVAGLAAIGAANSL-GAIVRAFDTRPEVKEQVQS 213 (401)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCGGGHHHHHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHH
Confidence 3578999999986 66666555553 3489999999887776643
No 458
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=83.16 E-value=1.9 Score=38.46 Aligned_cols=90 Identities=6% Similarity=-0.043 Sum_probs=54.2
Q ss_pred CeEEEE-cCC-cCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC--C----CCCCcc
Q 019957 168 GLLVDV-SCG-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--F----ASGFVD 239 (333)
Q Consensus 168 ~~vLDi-GcG-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp--~----~~~~fD 239 (333)
.+||=. |+| .|..+..+++.. +.+|+++|.++..++.+++. | .. .++..+-.++. . ....+|
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~~----G----a~-~~~~~~~~~~~~~v~~~~~~~g~D 235 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEE-GFRPIVTVRRDEQIALLKDI----G----AA-HVLNEKAPDFEATLREVMKAEQPR 235 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESCGGGHHHHHHH----T----CS-EEEETTSTTHHHHHHHHHHHHCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc----C----CC-EEEECCcHHHHHHHHHHhcCCCCc
Confidence 466644 444 366666666653 34999999999888877752 1 11 22222111111 0 013699
Q ss_pred eEEeccccccCCChHHHHHHHHHhccCCcEEEEEE
Q 019957 240 AVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (333)
Q Consensus 240 ~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 274 (333)
+|+-... ...+..+.+.|+++|++++..
T Consensus 236 ~vid~~g-------~~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 236 IFLDAVT-------GPLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp EEEESSC-------HHHHHHHHHHSCTTCEEEECC
T ss_pred EEEECCC-------ChhHHHHHhhhcCCCEEEEEe
Confidence 9886443 123577889999999998865
No 459
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=83.09 E-value=7.8 Score=32.89 Aligned_cols=79 Identities=16% Similarity=0.164 Sum_probs=53.9
Q ss_pred CCCeEEEEcCCcC---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCC-----C---
Q 019957 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF-----A--- 234 (333)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~-----~--- 234 (333)
.++++|=.|++.| .++..|++.+. +|+.++.++..++...+.+.... ..++.++.+|+.+... .
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~ 93 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGA--RLVLSGRDVSELDAARRALGEQF---GTDVHTVAIDLAEPDAPAELARRAA 93 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH---CCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhc---CCcEEEEEecCCCHHHHHHHHHHHH
Confidence 4567888887654 34556666665 89999999888777766554421 4578999999987541 0
Q ss_pred --CCCcceEEecccccc
Q 019957 235 --SGFVDAVHAGAALHC 249 (333)
Q Consensus 235 --~~~fD~V~~~~vl~h 249 (333)
-+..|+++.+..+.+
T Consensus 94 ~~~g~id~lv~nAg~~~ 110 (266)
T 4egf_A 94 EAFGGLDVLVNNAGISH 110 (266)
T ss_dssp HHHTSCSEEEEECCCCC
T ss_pred HHcCCCCEEEECCCcCC
Confidence 137899998765543
No 460
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=82.83 E-value=5.6 Score=33.53 Aligned_cols=102 Identities=10% Similarity=0.046 Sum_probs=61.5
Q ss_pred CCeEEEEcCCcCHHHH----HHHH-hCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-----CC--
Q 019957 167 GGLLVDVSCGSGLFSR----KFAK-SGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA-- 234 (333)
Q Consensus 167 ~~~vLDiGcG~G~~~~----~l~~-~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~-- 234 (333)
+.+||=.|+ +|.++. .|.+ .+. +|++++.++..++...+.+... ..++.++.+|+.+.. +.
T Consensus 4 ~k~vlITGa-sggIG~~~a~~L~~~~g~--~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dl~~~~~~~~~~~~~ 76 (276)
T 1wma_A 4 IHVALVTGG-NKGIGLAIVRDLCRLFSG--DVVLTARDVTRGQAAVQQLQAE----GLSPRFHQLDIDDLQSIRALRDFL 76 (276)
T ss_dssp CCEEEESSC-SSHHHHHHHHHHHHHSSS--EEEEEESSHHHHHHHHHHHHHT----TCCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHhcCC--eEEEEeCChHHHHHHHHHHHhc----CCeeEEEECCCCCHHHHHHHHHHH
Confidence 457787774 444444 4445 444 8999999987766666555543 346888999987642 00
Q ss_pred ---CCCcceEEeccccccCC----C-h--------------HHHHHHHHHhccCCcEEEEEEe
Q 019957 235 ---SGFVDAVHAGAALHCWP----S-P--------------SNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 235 ---~~~fD~V~~~~vl~h~~----d-~--------------~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
-+.+|+|+.+....... . . ..+++.+.+.++++|.++....
T Consensus 77 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS 139 (276)
T 1wma_A 77 RKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS 139 (276)
T ss_dssp HHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred HHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECC
Confidence 13689998765433211 1 1 1244556666666777776653
No 461
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=82.71 E-value=12 Score=31.15 Aligned_cols=75 Identities=16% Similarity=0.218 Sum_probs=50.1
Q ss_pred cCCCeEEEEcCCcC---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-----C-CC
Q 019957 165 AQGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----F-AS 235 (333)
Q Consensus 165 ~~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~-~~ 235 (333)
.++++||=.|++.| .++..|++.+. +|+.++.++..++...+.+ ..++.+..+|+.+.. + ..
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~ 82 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKLGS--KVIISGSNEEKLKSLGNAL-------KDNYTIEVCNLANKEECSNLISKT 82 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH-------CSSEEEEECCTTSHHHHHHHHHTC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHh-------ccCccEEEcCCCCHHHHHHHHHhc
Confidence 45678998887654 34555666665 8999999988777665543 346888888987632 1 12
Q ss_pred CCcceEEeccccc
Q 019957 236 GFVDAVHAGAALH 248 (333)
Q Consensus 236 ~~fD~V~~~~vl~ 248 (333)
+..|+++.+..+.
T Consensus 83 ~~id~li~~Ag~~ 95 (249)
T 3f9i_A 83 SNLDILVCNAGIT 95 (249)
T ss_dssp SCCSEEEECCC--
T ss_pred CCCCEEEECCCCC
Confidence 4689999876543
No 462
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=82.67 E-value=0.69 Score=42.29 Aligned_cols=43 Identities=21% Similarity=0.087 Sum_probs=31.5
Q ss_pred cCCCeEEEEcCCc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHH
Q 019957 165 AQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYD 208 (333)
Q Consensus 165 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~ 208 (333)
.++.+|+=+|+|. |.....+++.. +.+|+++|.++..++.+++
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 170 VPPARVLVFGVGVAGLQAIATAKRL-GAVVMATDVRAATKEQVES 213 (384)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCSTTHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH
Confidence 3678999999986 66666555554 3489999999876666654
No 463
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=82.67 E-value=8.2 Score=33.39 Aligned_cols=105 Identities=17% Similarity=0.163 Sum_probs=65.6
Q ss_pred CCCeEEEEcCCcC---HHHHHHHHhCCCCeEEEEeCC--HHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-----CC-
Q 019957 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFS--ENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA- 234 (333)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~D~s--~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~- 234 (333)
.++++|=.|++.| .++..|++.|. +|+.++.+ ....+...+.+... ..++.++.+|+.+.. +.
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~ 121 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGA--DVAINYLPAEEEDAQQVKALIEEC----GRKAVLLPGDLSDESFARSLVHK 121 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEECCGGGHHHHHHHHHHHHHT----TCCEEECCCCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCcchhHHHHHHHHHHHc----CCcEEEEEecCCCHHHHHHHHHH
Confidence 3668898887654 34556666665 89999886 33444444444443 357888889987642 00
Q ss_pred ----CCCcceEEeccccccC-C-----Ch--------------HHHHHHHHHhccCCcEEEEEEec
Q 019957 235 ----SGFVDAVHAGAALHCW-P-----SP--------------SNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 235 ----~~~fD~V~~~~vl~h~-~-----d~--------------~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
-+..|+++.+..+... . ++ ..+++.+...++++|.++.....
T Consensus 122 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~ 187 (294)
T 3r3s_A 122 AREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSI 187 (294)
T ss_dssp HHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCG
T ss_pred HHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCh
Confidence 1478999987665331 1 11 13456666778888888776543
No 464
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=82.64 E-value=11 Score=30.61 Aligned_cols=135 Identities=8% Similarity=0.039 Sum_probs=69.9
Q ss_pred eEEEEcCCc--CH-HHHHHH-HhCCCCeEEEEeCCHH-HHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-C--CCCCcce
Q 019957 169 LLVDVSCGS--GL-FSRKFA-KSGTYSGVVALDFSEN-MLRQCYDFIKQDNTILTSNLALVRADVCRLP-F--ASGFVDA 240 (333)
Q Consensus 169 ~vLDiGcG~--G~-~~~~l~-~~~~~~~v~g~D~s~~-~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-~--~~~~fD~ 240 (333)
+||=.|++. |. +...|. +.+. +|++++.++. .++.... . ..++.++.+|+.+.. . .-..+|+
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~--~V~~~~r~~~~~~~~~~~---~-----~~~~~~~~~D~~d~~~~~~~~~~~d~ 76 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDM--HITLYGRQLKTRIPPEII---D-----HERVTVIEGSFQNPGXLEQAVTNAEV 76 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCC--EEEEEESSHHHHSCHHHH---T-----STTEEEEECCTTCHHHHHHHHTTCSE
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCc--eEEEEecCccccchhhcc---C-----CCceEEEECCCCCHHHHHHHHcCCCE
Confidence 588888432 32 344455 4454 9999999876 4433321 1 557899999997632 0 0136799
Q ss_pred EEeccccccCCChHHHHHHHHHhccC-C-cEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCCcEEE
Q 019957 241 VHAGAALHCWPSPSNAVAEISRILRS-G-GVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYT 318 (333)
Q Consensus 241 V~~~~vl~h~~d~~~~l~~~~r~Lkp-g-G~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf~~v~ 318 (333)
|+.......+ . .+.+.+.++. | |.++...........+.....+........+.-+...++.++++.|+....
T Consensus 77 vv~~ag~~n~---~--~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~i~~~~ 151 (221)
T 3r6d_A 77 VFVGAMESGS---D--MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTI 151 (221)
T ss_dssp EEESCCCCHH---H--HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHHHSCSEEEE
T ss_pred EEEcCCCCCh---h--HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHHhCCCCEEE
Confidence 9976654322 1 3444444432 2 456554433221111111111111100001223356777888888987654
No 465
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=82.61 E-value=12 Score=31.94 Aligned_cols=104 Identities=18% Similarity=0.168 Sum_probs=66.1
Q ss_pred CCCeEEEEcCCcC---HHHHHHHHhCCCCeEEEEeCC-HHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-----CC--
Q 019957 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFS-ENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA-- 234 (333)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~D~s-~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~-- 234 (333)
.++++|=.|++.| .++..|++.|. +|+.++.+ ...++...+.+... ..++.++.+|+.+.. +.
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~Dv~d~~~v~~~~~~~ 103 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGA--AVALTYVNAAERAQAVVSEIEQA----GGRAVAIRADNRDAEAIEQAIRET 103 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHHHH
Confidence 4678998987665 35566666665 88888654 45555555555443 357888999997642 10
Q ss_pred ---CCCcceEEeccccccCC-----Ch--------------HHHHHHHHHhccCCcEEEEEEe
Q 019957 235 ---SGFVDAVHAGAALHCWP-----SP--------------SNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 235 ---~~~fD~V~~~~vl~h~~-----d~--------------~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
-+..|+++.+..+.+.. ++ ..+++.+.+.++++|.++....
T Consensus 104 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 104 VEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 13689999876553321 11 1345667777888888877654
No 466
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=82.55 E-value=11 Score=32.03 Aligned_cols=78 Identities=17% Similarity=0.297 Sum_probs=52.8
Q ss_pred CCCeEEEEcCCcC---HHHHHHHHhCCCCeEEEEeC-------------CHHHHHHHHHHHHhcCcCCCCCeEEEEccCC
Q 019957 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDF-------------SENMLRQCYDFIKQDNTILTSNLALVRADVC 229 (333)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~D~-------------s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~ 229 (333)
.++++|=.|++.| .++..|++.|. +|+.+|. +...++...+.+... ..++.++.+|+.
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~ 83 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGA--DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA----NRRIVAAVVDTR 83 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT----TCCEEEEECCTT
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCC--EEEEEeccccccccccccccCHHHHHHHHHHHHhc----CCeEEEEECCCC
Confidence 4668898887665 35566666665 8999998 566666665555443 457889999987
Q ss_pred CCC-----CC-----CCCcceEEecccccc
Q 019957 230 RLP-----FA-----SGFVDAVHAGAALHC 249 (333)
Q Consensus 230 ~lp-----~~-----~~~fD~V~~~~vl~h 249 (333)
+.. +. -+..|+++.+..+..
T Consensus 84 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~ 113 (277)
T 3tsc_A 84 DFDRLRKVVDDGVAALGRLDIIVANAGVAA 113 (277)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 642 11 146899998766543
No 467
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=82.14 E-value=5.3 Score=34.66 Aligned_cols=104 Identities=16% Similarity=0.182 Sum_probs=65.9
Q ss_pred CCCeEEEEcCCc----C-HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-----CC-
Q 019957 166 QGGLLVDVSCGS----G-LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA- 234 (333)
Q Consensus 166 ~~~~vLDiGcG~----G-~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~- 234 (333)
.++++|=.|++. | .++..|++.|. +|+.+|.++...+...+..... ..+.++.+|+.+.. +.
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~ 101 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGA--EVALTYLSETFKKRVDPLAESL-----GVKLTVPCDVSDAESVDNMFKV 101 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHHH-----TCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhc-----CCeEEEEcCCCCHHHHHHHHHH
Confidence 366889999743 4 25666777765 8999999876555555544442 34678899987642 11
Q ss_pred ----CCCcceEEeccccccC---------CCh--------------HHHHHHHHHhccCCcEEEEEEec
Q 019957 235 ----SGFVDAVHAGAALHCW---------PSP--------------SNAVAEISRILRSGGVFVGTTFL 276 (333)
Q Consensus 235 ----~~~fD~V~~~~vl~h~---------~d~--------------~~~l~~~~r~LkpgG~l~i~~~~ 276 (333)
-+..|+++.+..+... .+. ..+++.+...++.+|.++.....
T Consensus 102 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~ 170 (296)
T 3k31_A 102 LAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYY 170 (296)
T ss_dssp HHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECG
T ss_pred HHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEeh
Confidence 1478999987655321 111 12455666677778888876643
No 468
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=81.85 E-value=15 Score=31.66 Aligned_cols=77 Identities=21% Similarity=0.284 Sum_probs=52.3
Q ss_pred CCCeEEEEcCCcC---HHHHHHHHhCCCCeEEEEeCC------------HHHHHHHHHHHHhcCcCCCCCeEEEEccCCC
Q 019957 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFS------------ENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (333)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~D~s------------~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (333)
.++++|=.|++.| .++..|++.|. +|+.+|.+ +..++...+.+... ..++.++.+|+.+
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~ 100 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREGA--DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL----GRRIIASQVDVRD 100 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT----TCCEEEEECCTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEecccccccccccccCHHHHHHHHHHHHhc----CCceEEEECCCCC
Confidence 4678898888765 35566666665 89999987 56666555555543 3578899999976
Q ss_pred CC-----CC-----CCCcceEEeccccc
Q 019957 231 LP-----FA-----SGFVDAVHAGAALH 248 (333)
Q Consensus 231 lp-----~~-----~~~fD~V~~~~vl~ 248 (333)
.. +. -+..|+++.+..+.
T Consensus 101 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~ 128 (299)
T 3t7c_A 101 FDAMQAAVDDGVTQLGRLDIVLANAALA 128 (299)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 42 10 14789998766543
No 469
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=81.75 E-value=0.26 Score=34.03 Aligned_cols=41 Identities=17% Similarity=0.466 Sum_probs=21.4
Q ss_pred eecccCCCcc-ccccCCC-----Ccccccccc-CceeeCCCCccccCc
Q 019957 60 LFSCPICYEP-LIRKGPT-----GLTLGAIYR-SGFKCRKCDKTYSSK 100 (333)
Q Consensus 60 ~l~CP~C~~~-l~~~~~~-----~~~~~~~~~-~~~~C~~C~~~~~~~ 100 (333)
.+.||+|++. +...... ....-.+.. ..+.|++||..|...
T Consensus 2 ~m~Cp~Cg~~~l~~~~~~~~~~~~G~~~~I~~Vp~~~C~~CGE~~~~~ 49 (78)
T 3ga8_A 2 HMKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNK 49 (78)
T ss_dssp -CBCTTTSSSBEEEEEEEEEEEETTEEEEEEEEEEEEETTTCCEECCH
T ss_pred ceECCCCCCCeeEeEEEEEEEEECCEEEEEcCceeEECCCCCCEEECH
Confidence 3689999874 4221100 000011112 467899999887543
No 470
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=81.53 E-value=8.3 Score=33.27 Aligned_cols=102 Identities=19% Similarity=0.175 Sum_probs=68.0
Q ss_pred cCCCeEEEEcCCcC---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC---------
Q 019957 165 AQGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--------- 232 (333)
Q Consensus 165 ~~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp--------- 232 (333)
..++++|=-|++.| ..+..|++.|. +|+.+|.+++.++.+.+.+ ..+...+.+|+.+..
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga--~V~i~~r~~~~l~~~~~~~-------g~~~~~~~~Dv~~~~~v~~~~~~~ 97 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGA--RVFITGRRKDVLDAAIAEI-------GGGAVGIQADSANLAELDRLYEKV 97 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH-------CTTCEEEECCTTCHHHHHHHHHHH
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHc-------CCCeEEEEecCCCHHHHHHHHHHH
Confidence 34778888888776 35566677665 9999999998887765544 335678889987642
Q ss_pred -CCCCCcceEEeccccccCCC-----h--------------HHHHHHHHHhccCCcEEEEEEe
Q 019957 233 -FASGFVDAVHAGAALHCWPS-----P--------------SNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 233 -~~~~~fD~V~~~~vl~h~~d-----~--------------~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
-.-+..|+++.+..+..... + -...+.+...|+.+|.++....
T Consensus 98 ~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS 160 (273)
T 4fgs_A 98 KAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGS 160 (273)
T ss_dssp HHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECC
T ss_pred HHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEee
Confidence 01257899887665533211 1 1345666778888888777653
No 471
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=80.97 E-value=13 Score=31.83 Aligned_cols=77 Identities=16% Similarity=0.188 Sum_probs=51.6
Q ss_pred cCCCeEEEEcCCcC---HHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCC-----C-
Q 019957 165 AQGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDF-SENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF-----A- 234 (333)
Q Consensus 165 ~~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~D~-s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~-----~- 234 (333)
..++++|=.|++.| .++..|++.|. +|+.+|. ++..++...+.+... ..++.++.+|+.+... .
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~ 100 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAASGF--DIAITGIGDAEGVAPVIAELSGL----GARVIFLRADLADLSSHQATVDA 100 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCCHHHHHHHHHHHHHT----TCCEEEEECCTTSGGGHHHHHHH
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHCCC--eEEEEeCCCHHHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHH
Confidence 45678888887665 34556666665 8999995 666666665555543 3578999999977531 0
Q ss_pred ----CCCcceEEecccc
Q 019957 235 ----SGFVDAVHAGAAL 247 (333)
Q Consensus 235 ----~~~fD~V~~~~vl 247 (333)
-+..|+++.+..+
T Consensus 101 ~~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 101 VVAEFGRIDCLVNNAGI 117 (280)
T ss_dssp HHHHHSCCCEEEEECC-
T ss_pred HHHHcCCCCEEEECCCc
Confidence 1378999987665
No 472
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=80.80 E-value=9.6 Score=32.12 Aligned_cols=74 Identities=24% Similarity=0.292 Sum_probs=50.5
Q ss_pred CCCeEEEEcCCcC---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-----C----
Q 019957 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----F---- 233 (333)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~---- 233 (333)
.++++|=.|++.| .++..|++.|. +|+.+|.++..++...+.+ ..++.++.+|+.+.. +
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~v~~~~~~~~ 77 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGA--TVAIADIDIERARQAAAEI-------GPAAYAVQMDVTRQDSIDAAIAATV 77 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH-------CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHh-------CCCceEEEeeCCCHHHHHHHHHHHH
Confidence 4568888887654 34556666665 8999999988776655543 346788999987642 1
Q ss_pred -CCCCcceEEeccccc
Q 019957 234 -ASGFVDAVHAGAALH 248 (333)
Q Consensus 234 -~~~~fD~V~~~~vl~ 248 (333)
.-+..|+++.+..+.
T Consensus 78 ~~~g~id~lv~~Ag~~ 93 (259)
T 4e6p_A 78 EHAGGLDILVNNAALF 93 (259)
T ss_dssp HHSSSCCEEEECCCCC
T ss_pred HHcCCCCEEEECCCcC
Confidence 113789999876653
No 473
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=80.79 E-value=9.8 Score=32.53 Aligned_cols=76 Identities=14% Similarity=0.112 Sum_probs=52.6
Q ss_pred CCCeEEEEcCCcC---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCC---------
Q 019957 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF--------- 233 (333)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~--------- 233 (333)
.++++|=.|++.| .++..|++.|. +|+.+|.++..++...+.+... ..++.++.+|+.+...
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~~~~~~~~~~ 105 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGA--HVILHGVKPGSTAAVQQRIIAS----GGTAQELAGDLSEAGAGTDLIERAE 105 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSTTTTHHHHHHHHHT----TCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHH
Confidence 4668888887654 34556666665 8999999887766666665543 4578899999977531
Q ss_pred CCCCcceEEecccc
Q 019957 234 ASGFVDAVHAGAAL 247 (333)
Q Consensus 234 ~~~~fD~V~~~~vl 247 (333)
..+..|+++.+..+
T Consensus 106 ~~g~iD~lvnnAg~ 119 (275)
T 4imr_A 106 AIAPVDILVINASA 119 (275)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HhCCCCEEEECCCC
Confidence 01478999987664
No 474
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=80.43 E-value=9.9 Score=32.57 Aligned_cols=75 Identities=24% Similarity=0.297 Sum_probs=51.7
Q ss_pred CCCeEEEEcCCcC---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-----CC---
Q 019957 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA--- 234 (333)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~--- 234 (333)
.++++|=.|++.| .++..|++.|. +|+.+|.++..++...+.+ ..++.++.+|+.+.. +.
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~~~~~ 98 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGC--HVLCADIDGDAADAAATKI-------GCGAAACRVDVSDEQQIIAMVDACV 98 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHH-------CSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHc-------CCcceEEEecCCCHHHHHHHHHHHH
Confidence 4668888887665 35566666665 9999999988776665543 346788899987642 10
Q ss_pred --CCCcceEEecccccc
Q 019957 235 --SGFVDAVHAGAALHC 249 (333)
Q Consensus 235 --~~~fD~V~~~~vl~h 249 (333)
-+..|+++.+..+.+
T Consensus 99 ~~~g~iD~lvnnAg~~~ 115 (277)
T 3gvc_A 99 AAFGGVDKLVANAGVVH 115 (277)
T ss_dssp HHHSSCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCCCCC
Confidence 136899998766543
No 475
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=80.09 E-value=13 Score=30.59 Aligned_cols=78 Identities=22% Similarity=0.172 Sum_probs=52.4
Q ss_pred CCeEEEEcCCcC---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-----CC----
Q 019957 167 GGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA---- 234 (333)
Q Consensus 167 ~~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~---- 234 (333)
++++|=.|++.| .++..|.+.|. +|+.++.++..++...+.+.... ..++.++.+|+.+.. +.
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGY--ALALGARSVDRLEKIAHELMQEQ---GVEVFYHHLDVSKAESVEEFSKKVLE 76 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH---CCCEEEEECCTTCHHHHHHHCC-HHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhc---CCeEEEEEeccCCHHHHHHHHHHHHH
Confidence 457888886654 34556666665 89999999887777666554221 457889999997642 11
Q ss_pred -CCCcceEEecccccc
Q 019957 235 -SGFVDAVHAGAALHC 249 (333)
Q Consensus 235 -~~~fD~V~~~~vl~h 249 (333)
-+..|+++.+..+.+
T Consensus 77 ~~g~id~li~~Ag~~~ 92 (235)
T 3l77_A 77 RFGDVDVVVANAGLGY 92 (235)
T ss_dssp HHSSCSEEEECCCCCC
T ss_pred hcCCCCEEEECCcccc
Confidence 137899998776544
No 476
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=80.02 E-value=7.9 Score=33.02 Aligned_cols=85 Identities=8% Similarity=0.108 Sum_probs=50.8
Q ss_pred eEEEEcCCc-C-HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEeccc
Q 019957 169 LLVDVSCGS-G-LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAA 246 (333)
Q Consensus 169 ~vLDiGcG~-G-~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~v 246 (333)
+|.=||+|. | .++..+.+.+. +|+++|.++..++.+.+ .+. . .. ...+..+. ...|+|+..--
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~--~V~~~~~~~~~~~~~~~----~g~---~-~~-~~~~~~~~----~~~D~vi~av~ 66 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH--YLIGVSRQQSTCEKAVE----RQL---V-DE-AGQDLSLL----QTAKIIFLCTP 66 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHH----TTS---C-SE-EESCGGGG----TTCSEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHh----CCC---C-cc-ccCCHHHh----CCCCEEEEECC
Confidence 577789886 4 34556666664 89999999887766543 221 1 11 12333322 36798887532
Q ss_pred cccCCChHHHHHHHHHhccCCcEEE
Q 019957 247 LHCWPSPSNAVAEISRILRSGGVFV 271 (333)
Q Consensus 247 l~h~~d~~~~l~~~~r~LkpgG~l~ 271 (333)
-. ....+++++...++++..++
T Consensus 67 ~~---~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 67 IQ---LILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp HH---HHHHHHHHHGGGSCTTCEEE
T ss_pred HH---HHHHHHHHHHhhCCCCCEEE
Confidence 21 12456777777788877554
No 477
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=79.95 E-value=4.5 Score=34.27 Aligned_cols=104 Identities=14% Similarity=0.110 Sum_probs=64.9
Q ss_pred CCCeEEEEcCCcC---HHHHHHHHhCCCCeEEEE-eCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-----CC--
Q 019957 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVAL-DFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA-- 234 (333)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~-D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~-- 234 (333)
.++++|=.|++.| .++..|++.|. +|+.+ +.+....+...+.+... ..++.++.+|+.+.. +.
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGA--NVVLTYNGAAEGAATAVAEIEKL----GRSALAIKADLTNAAEVEAAISAA 80 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECSSCHHHHHHHHHHHTT----TSCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhc----CCceEEEEcCCCCHHHHHHHHHHH
Confidence 4668898887665 35556666665 88887 66666666666555543 346888999997642 10
Q ss_pred ---CCCcceEEeccccc-c---CC--Ch--------------HHHHHHHHHhccCCcEEEEEEe
Q 019957 235 ---SGFVDAVHAGAALH-C---WP--SP--------------SNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 235 ---~~~fD~V~~~~vl~-h---~~--d~--------------~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
-+..|+++.+.... . +. ++ ..+++.+...++++|.++....
T Consensus 81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS 144 (259)
T 3edm_A 81 ADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSS 144 (259)
T ss_dssp HHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred HHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcC
Confidence 14789998766433 1 11 11 1245556667777788777653
No 478
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=79.92 E-value=15 Score=31.32 Aligned_cols=77 Identities=19% Similarity=0.334 Sum_probs=52.2
Q ss_pred CCCeEEEEcCCcC---HHHHHHHHhCCCCeEEEEeCC----------------HHHHHHHHHHHHhcCcCCCCCeEEEEc
Q 019957 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFS----------------ENMLRQCYDFIKQDNTILTSNLALVRA 226 (333)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~D~s----------------~~~~~~a~~~~~~~~~~~~~~i~~~~~ 226 (333)
.++++|=.|++.| .++..|++.|. +|+.+|.+ ++.++...+.+... ..++.++.+
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 83 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGA--DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH----NRRIVTAEV 83 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT----TCCEEEEEC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeccccccccccccccccCCHHHHHHHHHHHhhc----CCceEEEEc
Confidence 4678998988765 35566666665 89999987 56666555555443 357889999
Q ss_pred cCCCCC-----CC-----CCCcceEEeccccc
Q 019957 227 DVCRLP-----FA-----SGFVDAVHAGAALH 248 (333)
Q Consensus 227 d~~~lp-----~~-----~~~fD~V~~~~vl~ 248 (333)
|+.+.. +. -+..|+++.+..+.
T Consensus 84 Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 115 (286)
T 3uve_A 84 DVRDYDALKAAVDSGVEQLGRLDIIVANAGIG 115 (286)
T ss_dssp CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCEEEECCccc
Confidence 997642 00 14789999876653
No 479
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=79.78 E-value=17 Score=36.29 Aligned_cols=43 Identities=19% Similarity=0.159 Sum_probs=34.5
Q ss_pred CCeEEEEcCCcCHHHHHHHHhCC-----CCeEEEEeCCHHHHHHHHHH
Q 019957 167 GGLLVDVSCGSGLFSRKFAKSGT-----YSGVVALDFSENMLRQCYDF 209 (333)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~~~-----~~~v~g~D~s~~~~~~a~~~ 209 (333)
..+|||+=||.|.++.-+...|. ..-+.++|+++.+++.-+.+
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~N 259 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYN 259 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHH
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHH
Confidence 45799999999999988877651 12578999999988877776
No 480
>3qt1_I DNA-directed RNA polymerases I, II, and III subun; transferase-transcription complex, RNA polymerase II, transc elongation; 4.30A {Saccharomyces cerevisiae}
Probab=79.73 E-value=1.5 Score=33.63 Aligned_cols=36 Identities=22% Similarity=0.379 Sum_probs=23.7
Q ss_pred cccCCCccccccCCCCccccccccCceeeCCCCccccCcCC
Q 019957 62 SCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSKDN 102 (333)
Q Consensus 62 ~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~g 102 (333)
=||.|++-|........ ....+.|++|+......+.
T Consensus 26 FCPeCgNmL~pked~~~-----~~l~~~CrtCgY~~~~~~~ 61 (133)
T 3qt1_I 26 FCRDCNNMLYPREDKEN-----NRLLFECRTCSYVEEAGSP 61 (133)
T ss_dssp BCTTTCCBCBCCBCTTT-----CCBCCBCSSSCCBCCCSCS
T ss_pred eCCCCCCEeeECccCCC-----ceeEEECCCCCCcEEcCCc
Confidence 49999997755432110 1247899999988765543
No 481
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=79.52 E-value=9.2 Score=32.86 Aligned_cols=89 Identities=9% Similarity=0.129 Sum_probs=50.9
Q ss_pred CeEEEEcCCc-C-HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEecc
Q 019957 168 GLLVDVSCGS-G-LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 245 (333)
Q Consensus 168 ~~vLDiGcG~-G-~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~ 245 (333)
.+|.=||+|. | .++..+.+.+...+|+++|.++..++.+.+ .|. ......|..+. -...|+|+..-
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~----~g~-----~~~~~~~~~~~---~~~aDvVilav 74 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALE----RGI-----VDEATADFKVF---AALADVIILAV 74 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHH----TTS-----CSEEESCTTTT---GGGCSEEEECS
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHH----cCC-----cccccCCHHHh---hcCCCEEEEcC
Confidence 4788899986 4 455666666544589999999887766544 221 11122333322 13578887643
Q ss_pred ccccCCChHHHHHHHHHh-ccCCcEEE
Q 019957 246 ALHCWPSPSNAVAEISRI-LRSGGVFV 271 (333)
Q Consensus 246 vl~h~~d~~~~l~~~~r~-LkpgG~l~ 271 (333)
--.. ...+++++... ++++..++
T Consensus 75 p~~~---~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 75 PIKK---TIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp CHHH---HHHHHHHHHTSCCCTTCEEE
T ss_pred CHHH---HHHHHHHHHhcCCCCCCEEE
Confidence 2221 13456666666 66665444
No 482
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=79.50 E-value=4.8 Score=34.10 Aligned_cols=77 Identities=18% Similarity=0.248 Sum_probs=48.0
Q ss_pred CCCeEEEEcCCcC---HHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-----CC--
Q 019957 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDF-SENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA-- 234 (333)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~D~-s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~-- 234 (333)
.+.+||=.|++.| .++..|.+.+. +|++++. ++..++...+.+... ..++.++.+|+.+.. +.
T Consensus 20 ~~k~vlItGasggiG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~l~~~----~~~~~~~~~D~~~~~~~~~~~~~~ 93 (274)
T 1ja9_A 20 AGKVALTTGAGRGIGRGIAIELGRRGA--SVVVNYGSSSKAAEEVVAELKKL----GAQGVAIQADISKPSEVVALFDKA 93 (274)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT----TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCchHHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHH
Confidence 3567887775433 23445555554 8999998 776666555555443 346888999987642 11
Q ss_pred ---CCCcceEEeccccc
Q 019957 235 ---SGFVDAVHAGAALH 248 (333)
Q Consensus 235 ---~~~fD~V~~~~vl~ 248 (333)
-+.+|+|+.+....
T Consensus 94 ~~~~~~~d~vi~~Ag~~ 110 (274)
T 1ja9_A 94 VSHFGGLDFVMSNSGME 110 (274)
T ss_dssp HHHHSCEEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 13689998765543
No 483
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=79.24 E-value=15 Score=30.98 Aligned_cols=79 Identities=15% Similarity=0.146 Sum_probs=52.4
Q ss_pred CCCeEEEEcCCcC---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-----C-CCC
Q 019957 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----F-ASG 236 (333)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~-~~~ 236 (333)
.++++|=.|++.| .++..|++.|. +|+.+|.++..++...+.+...+. ...+.++.+|+.+.. + .-+
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~g 84 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAEGA--NVLINGRREENVNETIKEIRAQYP--DAILQPVVADLGTEQGCQDVIEKYP 84 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHHCT--TCEEEEEECCTTSHHHHHHHHHHCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCC--CceEEEEecCCCCHHHHHHHHHhcC
Confidence 3567888886654 24555666665 999999998877776666555431 345778888887632 0 124
Q ss_pred CcceEEeccccc
Q 019957 237 FVDAVHAGAALH 248 (333)
Q Consensus 237 ~fD~V~~~~vl~ 248 (333)
..|+++.+..+.
T Consensus 85 ~id~lv~nAg~~ 96 (267)
T 3t4x_A 85 KVDILINNLGIF 96 (267)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 789999876554
No 484
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=79.20 E-value=11 Score=32.52 Aligned_cols=79 Identities=22% Similarity=0.232 Sum_probs=50.2
Q ss_pred CCCeEEEEcCCcC---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-----CC---
Q 019957 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA--- 234 (333)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~--- 234 (333)
.++++|=.|++.| .++..|++.|. +|+.++.++..++...+.+...+. ...++.++.+|+.+.. +.
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~ 101 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFAKEGA--QVTITGRNEDRLEETKQQILKAGV-PAEKINAVVADVTEASGQDDIINTTL 101 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTC-CGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCC-CCceEEEEecCCCCHHHHHHHHHHHH
Confidence 3567887776554 34455556665 899999998877666555544320 0116888999987642 11
Q ss_pred --CCCcceEEecccc
Q 019957 235 --SGFVDAVHAGAAL 247 (333)
Q Consensus 235 --~~~fD~V~~~~vl 247 (333)
-+.+|+++.+..+
T Consensus 102 ~~~g~iD~lvnnAG~ 116 (297)
T 1xhl_A 102 AKFGKIDILVNNAGA 116 (297)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HhcCCCCEEEECCCc
Confidence 1368999887654
No 485
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, transcription factor, DNA-binding, DNA-directed RNA polymerase; 4.30A {Saccharomyces cerevisiae}
Probab=79.11 E-value=0.9 Score=36.21 Aligned_cols=31 Identities=16% Similarity=0.521 Sum_probs=21.4
Q ss_pred cCeecccCCCcc---ccccCCCCccccccccCceeeCCCCccc
Q 019957 58 GDLFSCPICYEP---LIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (333)
Q Consensus 58 ~~~l~CP~C~~~---l~~~~~~~~~~~~~~~~~~~C~~C~~~~ 97 (333)
.....||.|++. +... ...|.+.|.+||.+.
T Consensus 19 n~~~~CPECGs~~t~IV~D---------~erGE~VCsdCGLVL 52 (197)
T 3k1f_M 19 NIVLTCPECKVYPPKIVER---------FSEGDVVCALCGLVL 52 (197)
T ss_dssp CCCCCCTTTCCSSCCEEEE---------GGGTEEEETTTCBBC
T ss_pred ccCeECcCCCCcCCeEEEe---------CCCCEEEEcCCCCCc
Confidence 345589999982 3321 224789999999875
No 486
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=78.84 E-value=2.8 Score=37.39 Aligned_cols=97 Identities=14% Similarity=0.069 Sum_probs=54.5
Q ss_pred HhhcccCCCeEEEEcC-C-cCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-----
Q 019957 160 EYFKSAQGGLLVDVSC-G-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----- 232 (333)
Q Consensus 160 ~~l~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp----- 232 (333)
+.....++.+||=+|+ | .|.++..+++......|++++ ++...+.++ .| .. .++. .-.++.
T Consensus 136 ~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-----~g---a~--~~~~-~~~~~~~~~~~ 203 (349)
T 4a27_A 136 EVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-----DS---VT--HLFD-RNADYVQEVKR 203 (349)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-----GG---SS--EEEE-TTSCHHHHHHH
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-----cC---Cc--EEEc-CCccHHHHHHH
Confidence 3345567889999998 3 377888887764345899988 554444443 12 11 1222 111110
Q ss_pred CCCCCcceEEeccccccCCChHHHHHHHHHhccCCcEEEEEEe
Q 019957 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
...+.+|+|+-.-. . ..+....+.|+++|++++...
T Consensus 204 ~~~~g~Dvv~d~~g-----~--~~~~~~~~~l~~~G~~v~~G~ 239 (349)
T 4a27_A 204 ISAEGVDIVLDCLC-----G--DNTGKGLSLLKPLGTYILYGS 239 (349)
T ss_dssp HCTTCEEEEEEECC--------------CTTEEEEEEEEEEC-
T ss_pred hcCCCceEEEECCC-----c--hhHHHHHHHhhcCCEEEEECC
Confidence 12357999885432 1 124678899999999987643
No 487
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=78.77 E-value=7.7 Score=33.16 Aligned_cols=89 Identities=15% Similarity=0.182 Sum_probs=51.6
Q ss_pred eEEEEcCCc-CH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCC-CcceEEecc
Q 019957 169 LLVDVSCGS-GL-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG-FVDAVHAGA 245 (333)
Q Consensus 169 ~vLDiGcG~-G~-~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~-~fD~V~~~~ 245 (333)
+|.=||+|. |. ++..+.+.+...+|+++|.++..++.+++ .|. ... ...|..+. -. ..|+|+..-
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~----~g~----~~~-~~~~~~~~---~~~~aDvVilav 70 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD----LGI----IDE-GTTSIAKV---EDFSPDFVMLSS 70 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH----TTS----CSE-EESCGGGG---GGTCCSEEEECS
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH----CCC----ccc-ccCCHHHH---hcCCCCEEEEcC
Confidence 677899886 43 45555555533479999999987766553 221 101 12233221 12 578888643
Q ss_pred ccccCCChHHHHHHHHHhccCCcEEEE
Q 019957 246 ALHCWPSPSNAVAEISRILRSGGVFVG 272 (333)
Q Consensus 246 vl~h~~d~~~~l~~~~r~LkpgG~l~i 272 (333)
-... ...++.++...++++.+++.
T Consensus 71 p~~~---~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 71 PVRT---FREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp CHHH---HHHHHHHHHHHSCTTCEEEE
T ss_pred CHHH---HHHHHHHHHhhCCCCcEEEE
Confidence 2221 23567777778888875554
No 488
>1pqv_S STP-alpha, transcription elongation factor S-II, DNA; mRNA cleavage, proofreading, BACKTRACKING, gene expression, multiprotein complex; 3.80A {Saccharomyces cerevisiae} SCOP: i.8.1.1 PDB: 1eo0_A
Probab=78.51 E-value=0.78 Score=40.62 Aligned_cols=41 Identities=17% Similarity=0.337 Sum_probs=23.1
Q ss_pred ccCeecccCCCcccccc-CCCCccccccccCceeeCCCCccc
Q 019957 57 EGDLFSCPICYEPLIRK-GPTGLTLGAIYRSGFKCRKCDKTY 97 (333)
Q Consensus 57 ~~~~l~CP~C~~~l~~~-~~~~~~~~~~~~~~~~C~~C~~~~ 97 (333)
....+.||.|++.-... .....+..+-..-.+.|.+|||.|
T Consensus 265 ~~~~~~C~~C~~~~~~~~q~Q~rsaDe~~t~f~~C~~Cg~~w 306 (309)
T 1pqv_S 265 VTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW 306 (309)
T ss_pred CcccccCCCCCCCeeEEEEeecccCCCCCcEEEEeCCCCCce
Confidence 35578999999842111 000111112223478899999986
No 489
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=78.34 E-value=1.9 Score=33.08 Aligned_cols=40 Identities=15% Similarity=0.253 Sum_probs=31.0
Q ss_pred CCCCCcceEEeccccc--cCCChHHHHHHHHHhccCCcEEEE
Q 019957 233 FASGFVDAVHAGAALH--CWPSPSNAVAEISRILRSGGVFVG 272 (333)
Q Consensus 233 ~~~~~fD~V~~~~vl~--h~~d~~~~l~~~~r~LkpgG~l~i 272 (333)
+++.+||.|+...--. +..-|..++..+.+.|||||.|..
T Consensus 55 Lp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 55 LENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred CCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 4478999998744333 234458999999999999999976
No 490
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=78.28 E-value=15 Score=31.18 Aligned_cols=78 Identities=18% Similarity=0.221 Sum_probs=55.9
Q ss_pred CCCeEEEEcCCcC---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC----------
Q 019957 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP---------- 232 (333)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp---------- 232 (333)
.++++|=-|++.| ..+..|++.|. +|+..|.+++.++...+.+...+ .++..+.+|+.+..
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga--~Vvi~~~~~~~~~~~~~~l~~~g----~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGA--RVILNDIRATLLAESVDTLTRKG----YDAHGVAFDVTDELAIEAAFSKLD 81 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEECCSCHHHHHHHHHHHHHTT----CCEEECCCCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC----CcEEEEEeeCCCHHHHHHHHHHHH
Confidence 4667888887665 34566666665 99999999998888777776653 47888889987632
Q ss_pred CCCCCcceEEecccccc
Q 019957 233 FASGFVDAVHAGAALHC 249 (333)
Q Consensus 233 ~~~~~fD~V~~~~vl~h 249 (333)
-.-++.|+++.+..+.+
T Consensus 82 ~~~G~iDiLVNNAG~~~ 98 (255)
T 4g81_D 82 AEGIHVDILINNAGIQY 98 (255)
T ss_dssp HTTCCCCEEEECCCCCC
T ss_pred HHCCCCcEEEECCCCCC
Confidence 11357899998766544
No 491
>1twf_I B12.6, DNA-directed RNA polymerase II 14.2 kDa polypepti; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.3.1 g.41.3.1 PDB: 1i3q_I 1i6h_I 1k83_I* 1nik_I 1nt9_I 1pqv_I 1r5u_I 1r9s_I* 1r9t_I* 1sfo_I* 1twa_I* 1twc_I* 1i50_I* 1twg_I* 1twh_I* 1wcm_I 1y1v_I 1y1w_I 1y1y_I 1y77_I* ...
Probab=77.82 E-value=1.4 Score=33.23 Aligned_cols=41 Identities=17% Similarity=0.221 Sum_probs=22.8
Q ss_pred CeecccCCCcccccc-CCCCccccccccCceeeCCCCccccC
Q 019957 59 DLFSCPICYEPLIRK-GPTGLTLGAIYRSGFKCRKCDKTYSS 99 (333)
Q Consensus 59 ~~l~CP~C~~~l~~~-~~~~~~~~~~~~~~~~C~~C~~~~~~ 99 (333)
....||.|++.-... .....+..+-..-.+.|.+|||.|..
T Consensus 71 t~~~Cp~C~~~~a~~~q~q~rsade~~t~fy~C~~C~~~w~~ 112 (122)
T 1twf_I 71 SDRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIFTS 112 (122)
T ss_dssp CCCCCTTTCCCCEEEEECSSCCTTCCCCEEEEETTTCCEEEC
T ss_pred cCCCCCCCCCCEEEEEEecCccCCCCceEEEEeCCCCCEecc
Confidence 357899999942110 00011111222346889999998744
No 492
>4esj_A Type-2 restriction enzyme DPNI; restriction endonuclease-DNA complex, type IIM, type IIE, RE enzyme, DPNI; HET: DNA 6MA; 2.05A {Streptococcus pneumoniae}
Probab=77.69 E-value=0.92 Score=37.94 Aligned_cols=45 Identities=24% Similarity=0.434 Sum_probs=26.4
Q ss_pred ccccccCccccc----CeecccCCCc-cccccCCCCccccccccCceeeCCCCccc
Q 019957 47 KSERNQTLELEG----DLFSCPICYE-PLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (333)
Q Consensus 47 ~~~~~~~~~~~~----~~l~CP~C~~-~l~~~~~~~~~~~~~~~~~~~C~~C~~~~ 97 (333)
.+++|-...++. ..+-||.||+ ++..... .-....+.|++|+..|
T Consensus 17 kS~SQ~aRVLTE~Wv~~n~yCPnCG~~~l~~f~n------N~PVaDF~C~~C~Eey 66 (257)
T 4esj_A 17 KSNSQKARILTEDWVYRQSYCPNCGNNPLNHFEN------NRPVADFYCNHCSEEF 66 (257)
T ss_dssp TTCTTHHHHHHHHHHHHHCCCTTTCCSSCEEC----------CCCEEECTTTCCEE
T ss_pred cChhheehhhhHHHHHHCCcCCCCCChhhhhccC------CCcccccccCCcchhh
Confidence 344444444433 3456999999 4544322 1123478999999988
No 493
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=77.21 E-value=11 Score=31.96 Aligned_cols=79 Identities=20% Similarity=0.277 Sum_probs=53.2
Q ss_pred CCCeEEEEcCCcC---HHHHHHHHhCCCCeEEEEeCC------------HHHHHHHHHHHHhcCcCCCCCeEEEEccCCC
Q 019957 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFS------------ENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (333)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~D~s------------~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (333)
.++++|=.|++.| .++..|++.|. +|+.+|.+ +..++...+.+... ..++.++.+|+.+
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~ 85 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGA--DIIAVDLCDQIASVPYPLATPEELAATVKLVEDI----GSRIVARQADVRD 85 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH----TCCEEEEECCTTC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--eEEEEecccccccccccccchHHHHHHHHHHHhc----CCeEEEEeCCCCC
Confidence 4668898887654 35566666665 89999986 66666555555443 3578999999976
Q ss_pred CC-----CC-----CCCcceEEeccccccC
Q 019957 231 LP-----FA-----SGFVDAVHAGAALHCW 250 (333)
Q Consensus 231 lp-----~~-----~~~fD~V~~~~vl~h~ 250 (333)
.. +. -+..|+++.+..+...
T Consensus 86 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~ 115 (278)
T 3sx2_A 86 RESLSAALQAGLDELGRLDIVVANAGIAPM 115 (278)
T ss_dssp HHHHHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 42 11 1478999987765443
No 494
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=77.08 E-value=5 Score=34.78 Aligned_cols=57 Identities=14% Similarity=0.084 Sum_probs=36.9
Q ss_pred CeEEE-EccCCCCCCCCCCcceEEeccc----ccc-C--CChH----HHHHHHHHhccCCcEEEEEEecc
Q 019957 220 NLALV-RADVCRLPFASGFVDAVHAGAA----LHC-W--PSPS----NAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 220 ~i~~~-~~d~~~lp~~~~~fD~V~~~~v----l~h-~--~d~~----~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
+.+++ .+|+...+ ..+++|+|++... -|| - .|-. -+++.+.++|+|||.|++-.+..
T Consensus 189 GAt~~~~lDfg~p~-~~~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvygg 257 (320)
T 2hwk_A 189 EATFRARLDLGIPG-DVPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGY 257 (320)
T ss_dssp TCSEECCGGGCSCT-TSCCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCC
T ss_pred CceeecccccCCcc-ccCcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecC
Confidence 44455 67776543 2367999998544 333 1 1221 24667788999999999988654
No 495
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=76.95 E-value=11 Score=31.53 Aligned_cols=74 Identities=19% Similarity=0.278 Sum_probs=48.8
Q ss_pred CeEEEEcCCcC---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-----CC-----
Q 019957 168 GLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA----- 234 (333)
Q Consensus 168 ~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~----- 234 (333)
+++|=.|++.| .++..|++.+. +|+.++.++..++...+.+... ..++.++.+|+.+.. +.
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~ 76 (256)
T 1geg_A 3 KVALVTGAGQGIGKAIALRLVKDGF--AVAIADYNDATAKAVASEINQA----GGHAVAVKVDVSDRDQVFAAVEQARKT 76 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 46787886544 34455666665 8999999987766665555443 246888899987642 10
Q ss_pred CCCcceEEecccc
Q 019957 235 SGFVDAVHAGAAL 247 (333)
Q Consensus 235 ~~~fD~V~~~~vl 247 (333)
-+.+|+++.+..+
T Consensus 77 ~g~id~lv~nAg~ 89 (256)
T 1geg_A 77 LGGFDVIVNNAGV 89 (256)
T ss_dssp TTCCCEEEECCCC
T ss_pred hCCCCEEEECCCC
Confidence 1378999986654
No 496
>3flo_B DNA polymerase alpha catalytic subunit A; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=76.87 E-value=1.5 Score=36.18 Aligned_cols=41 Identities=20% Similarity=0.478 Sum_probs=26.5
Q ss_pred ccCeecccCCCccccccCCCCccccccccCceeeCCCCccc
Q 019957 57 EGDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (333)
Q Consensus 57 ~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~ 97 (333)
++-.+.||.|+......+........+....+.|++|+..+
T Consensus 19 ~~l~l~Cp~C~~~~~F~gv~~~~~~~~~~sg~~C~~C~~~~ 59 (206)
T 3flo_B 19 VTLELSCPSCDKRFPFGGIVSSNYYRVSYNGLQCKHCEQLF 59 (206)
T ss_dssp CCEEEECTTTCCEEEECSSSCCSSEEEETTEEEETTTCCBC
T ss_pred ceeEEECCCCCCccCCCCcccCCCcccccccccCCCCCCcC
Confidence 45678999999865444322211112455688999998865
No 497
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=76.86 E-value=9.9 Score=26.09 Aligned_cols=56 Identities=16% Similarity=0.211 Sum_probs=37.6
Q ss_pred CChHHHHHHHHHhccCCcEEEEEEecccCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHhCCCcEEEEEEeC-eEEEE
Q 019957 251 PSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSKVQQ-SFIMF 328 (333)
Q Consensus 251 ~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~aGf~~v~~~~~~-~~~~~ 328 (333)
|.|.-.+++..+-|++|..|.+..-... +.+++..++++.|++++.....+ .|.++
T Consensus 21 P~Pvl~~kkal~~l~~G~~l~V~~dd~~----------------------a~~di~~~~~~~G~~~~~~~~~~~~~~i~ 77 (82)
T 3lvj_C 21 PEPVMMVRKTVRNMQPGETLLIIADDPA----------------------TTRDIPGFCTFMEHELVAKETDGLPYRYL 77 (82)
T ss_dssp THHHHHHHHHHHTSCTTCEEEEEECCTT----------------------HHHHHHHHHHHTTCEEEEEECSSSSEEEE
T ss_pred CHHHHHHHHHHHhCCCCCEEEEEECCcc----------------------HHHHHHHHHHHCCCEEEEEEecCCEEEEE
Confidence 4454445666667789998877663321 34689999999999988865444 45443
No 498
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=76.86 E-value=11 Score=34.59 Aligned_cols=94 Identities=14% Similarity=0.167 Sum_probs=61.5
Q ss_pred CCeEEEEcCCc-CHH-HHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC----CCCCCcce
Q 019957 167 GGLLVDVSCGS-GLF-SRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----FASGFVDA 240 (333)
Q Consensus 167 ~~~vLDiGcG~-G~~-~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp----~~~~~fD~ 240 (333)
..+|+=+|+|. |.. +..|.+.+. .|+++|.++..++.+++ .++.++.+|..+.. ..-...|+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~--~vvvId~d~~~v~~~~~----------~g~~vi~GDat~~~~L~~agi~~A~~ 71 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV--KMVVLDHDPDHIETLRK----------FGMKVFYGDATRMDLLESAGAAKAEV 71 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC--CEEEEECCHHHHHHHHH----------TTCCCEESCTTCHHHHHHTTTTTCSE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC--CEEEEECCHHHHHHHHh----------CCCeEEEcCCCCHHHHHhcCCCccCE
Confidence 34688888875 443 334444444 89999999999887764 24567889987642 12346888
Q ss_pred EEeccccccCCChH--HHHHHHHHhccCCcEEEEEEecc
Q 019957 241 VHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLR 277 (333)
Q Consensus 241 V~~~~vl~h~~d~~--~~l~~~~r~LkpgG~l~i~~~~~ 277 (333)
|++.. ++.. ..+....+.+.|...++....+.
T Consensus 72 viv~~-----~~~~~n~~i~~~ar~~~p~~~Iiara~~~ 105 (413)
T 3l9w_A 72 LINAI-----DDPQTNLQLTEMVKEHFPHLQIIARARDV 105 (413)
T ss_dssp EEECC-----SSHHHHHHHHHHHHHHCTTCEEEEEESSH
T ss_pred EEECC-----CChHHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 77643 2332 34556667778888887766543
No 499
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=76.56 E-value=14 Score=31.28 Aligned_cols=104 Identities=20% Similarity=0.219 Sum_probs=65.3
Q ss_pred CCCeEEEEcCCcC---HHHHHHHHhCCCCeEEEE-eCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCC-----CC--
Q 019957 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVAL-DFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA-- 234 (333)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~-D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~-- 234 (333)
.++++|=.|++.| .++..|++.|. +|+.+ ..++...+...+.+... ..++.++.+|+.+.. +.
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~G~--~Vv~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~ 99 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASDGF--TVVINYAGKAAAAEEVAGKIEAA----GGKALTAQADVSDPAAVRRLFATA 99 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHHTC--EEEEEESSCSHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhc----CCeEEEEEcCCCCHHHHHHHHHHH
Confidence 3668888887665 35566777775 78776 44555555555555443 347888999997642 10
Q ss_pred ---CCCcceEEeccccccCCC-----h--------------HHHHHHHHHhccCCcEEEEEEe
Q 019957 235 ---SGFVDAVHAGAALHCWPS-----P--------------SNAVAEISRILRSGGVFVGTTF 275 (333)
Q Consensus 235 ---~~~fD~V~~~~vl~h~~d-----~--------------~~~l~~~~r~LkpgG~l~i~~~ 275 (333)
-+..|+++.+..+..... . ..+++.+.+.++++|.++....
T Consensus 100 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS 162 (267)
T 3u5t_A 100 EEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMST 162 (267)
T ss_dssp HHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeC
Confidence 147899998765543211 1 1245666777778888877653
No 500
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=76.48 E-value=13 Score=31.84 Aligned_cols=84 Identities=15% Similarity=0.155 Sum_probs=50.2
Q ss_pred CeEEEEcC-Cc-C-HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEccCCCCCCCCCCcceEEec
Q 019957 168 GLLVDVSC-GS-G-LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (333)
Q Consensus 168 ~~vLDiGc-G~-G-~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~ 244 (333)
.+|.=||+ |. | .++..+.+.+. +|+++|.++..++.+.+ .| +.. .+..+ .-...|+|+..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~----~g------~~~--~~~~~---~~~~aDvVi~a 74 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAH--HLAAIEIAPEGRDRLQG----MG------IPL--TDGDG---WIDEADVVVLA 74 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSS--EEEEECCSHHHHHHHHH----TT------CCC--CCSSG---GGGTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHh----cC------CCc--CCHHH---HhcCCCEEEEc
Confidence 37899999 86 4 45566666664 89999999887766554 12 111 12211 12357988865
Q ss_pred cccccCCChHHHHHHHHHhccCCcEEE
Q 019957 245 AALHCWPSPSNAVAEISRILRSGGVFV 271 (333)
Q Consensus 245 ~vl~h~~d~~~~l~~~~r~LkpgG~l~ 271 (333)
---.. ...+++++...+++|..++
T Consensus 75 v~~~~---~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 75 LPDNI---IEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp SCHHH---HHHHHHHHGGGSCTTCEEE
T ss_pred CCchH---HHHHHHHHHHhCCCCCEEE
Confidence 43222 2455666666677766544
Done!