BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019959
(333 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255585889|ref|XP_002533618.1| GTP-binding protein yptv3, putative [Ricinus communis]
gi|223526492|gb|EEF28762.1| GTP-binding protein yptv3, putative [Ricinus communis]
Length = 336
Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust.
Identities = 278/336 (82%), Positives = 309/336 (91%), Gaps = 3/336 (0%)
Query: 1 MFWKERERENKELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGV 60
MFW++RERENK+ NGGPP GQVRVLV GDSGVGKTSLV+LIVKGSS + P QTIGCTVGV
Sbjct: 1 MFWRDRERENKDQNGGPPCGQVRVLVAGDSGVGKTSLVHLIVKGSSTAHPPQTIGCTVGV 60
Query: 61 KHITYGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRR 120
KH+TYG+SGSSS+S+KGD+ERDFFVELWD+SGHERYKDCRS+ YSQINGVIFVHDLSQRR
Sbjct: 61 KHVTYGNSGSSSSSLKGDAERDFFVELWDVSGHERYKDCRSLFYSQINGVIFVHDLSQRR 120
Query: 121 TKTSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAA 180
TKTSLQKWA EIA +GTFSAPL SGGP G+PVPY+VIGNKADVAAKEGTRGSSGNLVD A
Sbjct: 121 TKTSLQKWASEIAATGTFSAPLGSGGPCGIPVPYIVIGNKADVAAKEGTRGSSGNLVDVA 180
Query: 181 RQWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMP 240
RQWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEA++KFFRMLIRRRYFSDE+
Sbjct: 181 RQWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEALLKFFRMLIRRRYFSDELT 240
Query: 241 APNPWSISPTHKPIQRLDENSSDDDKFYSSG-YSSDP--YNMLPPLPAQRNLTPPPTLYP 297
AP+PW++SP + +QRLDENSSDDD+FY S + DP YNMLPPLPAQRNLTPPPTLYP
Sbjct: 241 APSPWTVSPAQRSVQRLDENSSDDDQFYKSKRLTGDPYKYNMLPPLPAQRNLTPPPTLYP 300
Query: 298 QQPVSVQENYNLPRFSLTGSQEISSSARSKRTDINV 333
QQPVSV ENY+ PRFSL+ +QE+S++ARSKR DINV
Sbjct: 301 QQPVSVTENYSFPRFSLSDAQELSNTARSKRLDINV 336
>gi|224096339|ref|XP_002310606.1| predicted protein [Populus trichocarpa]
gi|222853509|gb|EEE91056.1| predicted protein [Populus trichocarpa]
Length = 336
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 278/336 (82%), Positives = 310/336 (92%), Gaps = 3/336 (0%)
Query: 1 MFWKERERENKELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGV 60
MFW++RERENK+ NGGPP GQVRVLVVGDSGVGKTSLV+LIVKGSS +RP QTIGCTVGV
Sbjct: 1 MFWRDRERENKDQNGGPPCGQVRVLVVGDSGVGKTSLVHLIVKGSSSARPPQTIGCTVGV 60
Query: 61 KHITYGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRR 120
KHI+YG+S SSS+SIKGDSERDFFVELWD+SGH+RYKDCRS+ YSQINGVIFVHDLSQRR
Sbjct: 61 KHISYGNSSSSSSSIKGDSERDFFVELWDVSGHDRYKDCRSLFYSQINGVIFVHDLSQRR 120
Query: 121 TKTSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAA 180
TKTSLQKWA EIA +GTFSAPL+SGGPGGLPVPY+VIGNK+DVAAKEGTRGSSGNLVDAA
Sbjct: 121 TKTSLQKWASEIAATGTFSAPLSSGGPGGLPVPYIVIGNKSDVAAKEGTRGSSGNLVDAA 180
Query: 181 RQWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMP 240
RQWVEKQGLLPSSEE+PLTESFPG GGLIAAAKEARYDKEAV+KFFR LIRRRYFSDE+P
Sbjct: 181 RQWVEKQGLLPSSEEIPLTESFPGSGGLIAAAKEARYDKEAVVKFFRTLIRRRYFSDELP 240
Query: 241 APNPWSISPTHKPIQRLDENSSDDDKFY-SSGYSSDP--YNMLPPLPAQRNLTPPPTLYP 297
AP+PWS P + +QRLDEN+SD+D FY ++ + DP YN LPPLPAQRNLTPPPTLYP
Sbjct: 241 APSPWSAYPVQRSVQRLDENTSDEDPFYKTTSLAGDPYKYNTLPPLPAQRNLTPPPTLYP 300
Query: 298 QQPVSVQENYNLPRFSLTGSQEISSSARSKRTDINV 333
QQPVSV E+Y++PRF+LTGSQEIS++AR KR DINV
Sbjct: 301 QQPVSVTESYSIPRFTLTGSQEISNTARLKRMDINV 336
>gi|224083815|ref|XP_002307133.1| predicted protein [Populus trichocarpa]
gi|222856582|gb|EEE94129.1| predicted protein [Populus trichocarpa]
Length = 336
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 275/336 (81%), Positives = 306/336 (91%), Gaps = 3/336 (0%)
Query: 1 MFWKERERENKELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGV 60
MFW++RERENK+ NGGPP GQVRVL+VGDSGVGKTSLV+LI+K SS +RP QTIGCTVGV
Sbjct: 1 MFWRDRERENKDQNGGPPCGQVRVLIVGDSGVGKTSLVHLIIKSSSIARPPQTIGCTVGV 60
Query: 61 KHITYGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRR 120
KHITYG+SGSSS+SIKGDSERDFF+ELWD+SGHERYKDCRS+ YSQINGVIFVHDLSQRR
Sbjct: 61 KHITYGNSGSSSSSIKGDSERDFFIELWDVSGHERYKDCRSLFYSQINGVIFVHDLSQRR 120
Query: 121 TKTSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAA 180
TKTSLQKWA EIA +GTFSAPL+SGGPGGLPVPY+V+ NKADVAAKEGTRGSSGNLVDAA
Sbjct: 121 TKTSLQKWASEIAATGTFSAPLSSGGPGGLPVPYIVVSNKADVAAKEGTRGSSGNLVDAA 180
Query: 181 RQWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMP 240
R WVEKQGLLPSSEE+PLTESFPG GGLI+AAKEARYDKEAV++FFRMLIRRRYFSDE+P
Sbjct: 181 RHWVEKQGLLPSSEEIPLTESFPGSGGLISAAKEARYDKEAVVRFFRMLIRRRYFSDELP 240
Query: 241 APNPWSISPTHKPIQRLDENSSDDDKFY---SSGYSSDPYNMLPPLPAQRNLTPPPTLYP 297
A +PWS SP + +QRLDEN SD+D FY S S YNMLPPLPAQRNLTPPPTLYP
Sbjct: 241 ASSPWSASPVQRSVQRLDENISDEDPFYKATSLAGDSYKYNMLPPLPAQRNLTPPPTLYP 300
Query: 298 QQPVSVQENYNLPRFSLTGSQEISSSARSKRTDINV 333
QQPVSV+E+Y +PRF L+GSQEIS++ARSKR DINV
Sbjct: 301 QQPVSVRESYGIPRFPLSGSQEISNTARSKRMDINV 336
>gi|291191425|gb|ACS66798.2| unknown [Dimocarpus longan]
Length = 338
Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust.
Identities = 285/338 (84%), Positives = 307/338 (90%), Gaps = 5/338 (1%)
Query: 1 MFWKERERENKELNGG-PPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVG 59
MFW+ERERE KE NGG PP+GQ+RVLVVGDSGVGKTSLV+LIVKGSS +RP QTIGCTVG
Sbjct: 1 MFWRERERETKEQNGGGPPSGQIRVLVVGDSGVGKTSLVHLIVKGSSTARPPQTIGCTVG 60
Query: 60 VKHITYGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQR 119
VKH+TYG+SGSSS+SIKGDSERDFFVELWD+SGHERYKDCRS+ YSQINGVIFVHDLSQR
Sbjct: 61 VKHLTYGNSGSSSSSIKGDSERDFFVELWDVSGHERYKDCRSLFYSQINGVIFVHDLSQR 120
Query: 120 RTKTSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDA 179
RTKTSLQKWA E+A SGTFSAPL S GPGGLPVPY+VIGNKADVAAKEGTRGSSGNLV+
Sbjct: 121 RTKTSLQKWASEVAASGTFSAPLGSAGPGGLPVPYMVIGNKADVAAKEGTRGSSGNLVEV 180
Query: 180 ARQWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEM 239
ARQWVEKQGLL +SEELPLTESFPG GG IAAAKEARYDKEAV+KFFRMLIRRRYFSDE+
Sbjct: 181 ARQWVEKQGLLSTSEELPLTESFPGSGGAIAAAKEARYDKEAVIKFFRMLIRRRYFSDEL 240
Query: 240 PAPNPWSISPTHKP-IQRLDENSSDDDKFY-SSGYSSDP--YNMLPPLPAQRNLTPPPTL 295
P PNPWSISP KP QRLDEN SD+D FY S+ S DP YN LPPLPAQRNLTPPPTL
Sbjct: 241 PVPNPWSISPAQKPSSQRLDENFSDEDSFYKSTSLSGDPYKYNTLPPLPAQRNLTPPPTL 300
Query: 296 YPQQPVSVQENYNLPRFSLTGSQEISSSARSKRTDINV 333
YPQQPVSV ENY+LPRFS +GS EISS+ARSKR+DINV
Sbjct: 301 YPQQPVSVPENYSLPRFSPSGSSEISSTARSKRSDINV 338
>gi|225438537|ref|XP_002279569.1| PREDICTED: uncharacterized GTP-binding protein At5g64813 [Vitis
vinifera]
gi|147843269|emb|CAN80534.1| hypothetical protein VITISV_035973 [Vitis vinifera]
gi|296082516|emb|CBI21521.3| unnamed protein product [Vitis vinifera]
Length = 336
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 267/337 (79%), Positives = 299/337 (88%), Gaps = 5/337 (1%)
Query: 1 MFWKERERENKELNGG-PPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVG 59
MFW+ER+RENKE NGG PP GQVRVLVVGDSGVGKTSLV+L+VKGSS ++P QT+GCTVG
Sbjct: 1 MFWRERDRENKEHNGGGPPCGQVRVLVVGDSGVGKTSLVHLLVKGSSITQPPQTVGCTVG 60
Query: 60 VKHITYGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQR 119
VKH YG+SGSSSNSIKGDSERDFF+ELWD+SGH+RYK+CRS+ YSQINGVIFVHDLSQR
Sbjct: 61 VKHTAYGNSGSSSNSIKGDSERDFFIELWDVSGHDRYKECRSLFYSQINGVIFVHDLSQR 120
Query: 120 RTKTSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDA 179
RTK SLQKWA EIA +GTFSAPL SGGP GLPVP++VIGNK D+AAKEGTRGSSGNLVD
Sbjct: 121 RTKASLQKWAAEIAATGTFSAPLGSGGPCGLPVPFIVIGNKTDIAAKEGTRGSSGNLVDV 180
Query: 180 ARQWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEM 239
ARQWVEKQGLLPSSEELPLTESFP GG++AAAKEAR DKEAVMKFFR+LIRRRYFSDE+
Sbjct: 181 ARQWVEKQGLLPSSEELPLTESFPSSGGILAAAKEARVDKEAVMKFFRLLIRRRYFSDEL 240
Query: 240 PAPNPWSISPTHKPIQRLDENSSDDDKFY-SSGYSSDP--YNMLPPLPAQRNLTPPPTLY 296
PAP+PWSISP PIQR +N S+D++FY ++ DP YN+LPPLPAQRNLTPPPTLY
Sbjct: 241 PAPSPWSISPVQGPIQRAGDNLSEDNQFYKNTSLGGDPYKYNVLPPLPAQRNLTPPPTLY 300
Query: 297 PQQPVSVQENYNLPRFSLTGSQEISSSARSKRTDINV 333
PQQPVSV ENYNLPRF+L GS EI ++ R KR DINV
Sbjct: 301 PQQPVSVAENYNLPRFALNGSPEIINT-RQKRADINV 336
>gi|449461441|ref|XP_004148450.1| PREDICTED: uncharacterized GTP-binding protein At5g64813-like
[Cucumis sativus]
gi|449529012|ref|XP_004171495.1| PREDICTED: uncharacterized GTP-binding protein At5g64813-like
[Cucumis sativus]
Length = 336
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 267/336 (79%), Positives = 300/336 (89%), Gaps = 3/336 (0%)
Query: 1 MFWKERERENKELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGV 60
MFWK+R+RE+KELNGGP GQVRVLVVGDSGVGKTSLV+LIV GSS S PSQTIGCTVGV
Sbjct: 1 MFWKDRDREHKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISSPSQTIGCTVGV 60
Query: 61 KHITYGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRR 120
KHITYG++GSSS+SIKGD+ERDFFVELWD+SGH+RYKDCRS+ YSQINGVIFVHDLSQRR
Sbjct: 61 KHITYGNAGSSSSSIKGDAERDFFVELWDVSGHDRYKDCRSLFYSQINGVIFVHDLSQRR 120
Query: 121 TKTSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAA 180
TK+SLQKWAVEIAT GTFSAPL SGGPGGLPVPY+VIGNK D+AAKEGTRGSSGNLVD A
Sbjct: 121 TKSSLQKWAVEIATIGTFSAPLGSGGPGGLPVPYIVIGNKVDIAAKEGTRGSSGNLVDVA 180
Query: 181 RQWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMP 240
RQWVEKQGLL SEE+PLTESFPGGGGL+AAAKEARYDKEAV FFR LIRRRYFSD +P
Sbjct: 181 RQWVEKQGLLSFSEEIPLTESFPGGGGLLAAAKEARYDKEAVTNFFRTLIRRRYFSDSLP 240
Query: 241 APNPWSISPTHKPIQRLDENSSDDDKFYSS-GYSSD--PYNMLPPLPAQRNLTPPPTLYP 297
A WS+SP K +QRLD+ SD+++ YS +SS+ YN LPPLPAQRNLTPPPTLYP
Sbjct: 241 AAITWSVSPVPKSVQRLDDTISDEEQSYSRPSFSSETYKYNALPPLPAQRNLTPPPTLYP 300
Query: 298 QQPVSVQENYNLPRFSLTGSQEISSSARSKRTDINV 333
QQP S ENY+LP+F+L+ SQEI++S+RSKR+DINV
Sbjct: 301 QQPFSASENYSLPKFALSASQEINNSSRSKRSDINV 336
>gi|18424871|ref|NP_568996.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
gi|29839609|sp|Q9C5J9.1|Y5483_ARATH RecName: Full=Uncharacterized GTP-binding protein At5g64813
gi|13430582|gb|AAK25913.1|AF360203_1 unknown protein [Arabidopsis thaliana]
gi|14532852|gb|AAK64108.1| unknown protein [Arabidopsis thaliana]
gi|332010571|gb|AED97954.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
Length = 342
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 265/340 (77%), Positives = 292/340 (85%), Gaps = 8/340 (2%)
Query: 2 FWKERERENKELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVK 61
FW+ERERENKE P GQVRVLVVGDSGVGKTSLV+LI KGSS RP QTIGCTVGVK
Sbjct: 3 FWRERERENKEQILAPLCGQVRVLVVGDSGVGKTSLVHLINKGSSIVRPPQTIGCTVGVK 62
Query: 62 HITYGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRT 121
HITYGS SSS+SI+GDSERDFFVELWD+SGHERYKDCRS+ YSQINGVIFVHDLSQRRT
Sbjct: 63 HITYGSPASSSSSIQGDSERDFFVELWDVSGHERYKDCRSLFYSQINGVIFVHDLSQRRT 122
Query: 122 KTSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAAR 181
KTSLQKWA E+A +GTFSAPL SGGPGGLPVPY+V+GNKAD+AAKEGT+GSSGNLVDAAR
Sbjct: 123 KTSLQKWASEVAATGTFSAPLPSGGPGGLPVPYIVVGNKADIAAKEGTKGSSGNLVDAAR 182
Query: 182 QWVEKQGLLP-SSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMP 240
WVEKQGLLP SSE+LPL ESFPG GGLIAAAKE RYDKEA+ KFFRMLIRRRYFSDE+P
Sbjct: 183 HWVEKQGLLPSSSEDLPLFESFPGNGGLIAAAKETRYDKEALNKFFRMLIRRRYFSDELP 242
Query: 241 APNPWSISPT-HKPIQRLDENSSDDDKFYS-SGYSSDPY---NMLPPLPAQRNLTPPPTL 295
A +PWSISP QRLDE +SDDD+FY + + DPY N +PPLPAQRNLTPPPTL
Sbjct: 243 AASPWSISPVPTSSSQRLDEITSDDDQFYKRTSFHGDPYKYNNTIPPLPAQRNLTPPPTL 302
Query: 296 YPQQPVSVQENYNLPRFSLTGSQEISS--SARSKRTDINV 333
YPQQPVS +NY +PR+SL+ QE ++ SARSKR DINV
Sbjct: 303 YPQQPVSTPDNYTIPRYSLSSVQETTNNGSARSKRMDINV 342
>gi|356512750|ref|XP_003525079.1| PREDICTED: uncharacterized GTP-binding protein At5g64813-like
[Glycine max]
Length = 336
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 274/336 (81%), Positives = 301/336 (89%), Gaps = 3/336 (0%)
Query: 1 MFWKERERENKELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGV 60
MFW++RERENKELNGG G VRVLVVGDSGVGKTSLVNLIVKGS +RP QTIGC+V V
Sbjct: 1 MFWRDRERENKELNGGVLCGLVRVLVVGDSGVGKTSLVNLIVKGSPIARPPQTIGCSVDV 60
Query: 61 KHITYGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRR 120
KHITYG+SGSSS+S+KGDSERDFFVELWD+SGHERYKDCRS+ YSQINGVIFVHDLSQRR
Sbjct: 61 KHITYGNSGSSSSSLKGDSERDFFVELWDVSGHERYKDCRSLFYSQINGVIFVHDLSQRR 120
Query: 121 TKTSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAA 180
TKTSLQKWA EIA +GTFSAPL SGGPGGLPVPY+ IGNKAD+AAKEGTRGSSGNLVD A
Sbjct: 121 TKTSLQKWAAEIAATGTFSAPLGSGGPGGLPVPYIFIGNKADIAAKEGTRGSSGNLVDVA 180
Query: 181 RQWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMP 240
RQWVEKQGLLPSSEELPLTESFPG GGLIAAAKEAR+DKEAV+KFFRMLIRRRYFSDE+
Sbjct: 181 RQWVEKQGLLPSSEELPLTESFPGNGGLIAAAKEARHDKEAVVKFFRMLIRRRYFSDEIQ 240
Query: 241 APNP-WSISPTHKPIQRLDENSSDDDKFYSSGYSSDP--YNMLPPLPAQRNLTPPPTLYP 297
P+P WSI + QR+DEN ++DD+ Y + SSDP YNMLPPLPAQRNLTPPPTLYP
Sbjct: 241 IPSPAWSIPSVQRQAQRIDENFTEDDQSYDTSLSSDPYKYNMLPPLPAQRNLTPPPTLYP 300
Query: 298 QQPVSVQENYNLPRFSLTGSQEISSSARSKRTDINV 333
QQPVSV ENY+ PRFSL+GS EIS+ AR+KR+DINV
Sbjct: 301 QQPVSVSENYSFPRFSLSGSSEISTVARTKRSDINV 336
>gi|297794079|ref|XP_002864924.1| hypothetical protein ARALYDRAFT_496698 [Arabidopsis lyrata subsp.
lyrata]
gi|297310759|gb|EFH41183.1| hypothetical protein ARALYDRAFT_496698 [Arabidopsis lyrata subsp.
lyrata]
Length = 342
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 260/340 (76%), Positives = 288/340 (84%), Gaps = 8/340 (2%)
Query: 2 FWKERERENKELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVK 61
FW+ERER+NKE P GQVRVLVVGDSGVGKTSLV+LI KGSS RP QTIGCTVGVK
Sbjct: 3 FWRERERDNKEQILAPLCGQVRVLVVGDSGVGKTSLVHLINKGSSIVRPPQTIGCTVGVK 62
Query: 62 HITYGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRT 121
HITYGS SSS+SI+GDSERDFFVELWD+SGHERYKDCRS+ YSQINGVIFVHDLSQRRT
Sbjct: 63 HITYGSPASSSSSIQGDSERDFFVELWDVSGHERYKDCRSLFYSQINGVIFVHDLSQRRT 122
Query: 122 KTSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAAR 181
KTSLQ+WA E+A +GTFSAPL SGGPGGLPVPY+V+GNKAD+AAKEGT+GSSGNLVDAAR
Sbjct: 123 KTSLQRWASEVAATGTFSAPLPSGGPGGLPVPYIVVGNKADIAAKEGTKGSSGNLVDAAR 182
Query: 182 QWVEKQGLLP-SSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMP 240
WVEKQGLLP SSE+LPL ESFPG GGLIAAAKE RYDKEA+ KFFRMLIRRRYFSDE+P
Sbjct: 183 HWVEKQGLLPSSSEDLPLFESFPGNGGLIAAAKETRYDKEALNKFFRMLIRRRYFSDELP 242
Query: 241 APNPW-SISPTHKPIQRLDENSSDDDKFYS-SGYSSDPY---NMLPPLPAQRNLTPPPTL 295
A +PW S QRLDE +SDDD+FY + DPY N LPPLPAQRNLTPPPTL
Sbjct: 243 AASPWSVSSIPTSSSQRLDEITSDDDQFYKRTSLHGDPYKYNNTLPPLPAQRNLTPPPTL 302
Query: 296 YPQQPVSVQENYNLPRFSLTGSQEISS--SARSKRTDINV 333
YPQQPVS +NY +PR+SL+ QE ++ SAR+KR DINV
Sbjct: 303 YPQQPVSTPDNYAIPRYSLSSVQESTNNGSARAKRMDINV 342
>gi|356525537|ref|XP_003531381.1| PREDICTED: uncharacterized GTP-binding protein At5g64813-like
[Glycine max]
Length = 333
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 271/336 (80%), Positives = 300/336 (89%), Gaps = 6/336 (1%)
Query: 1 MFWKERERENKELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGV 60
MFW++RERENKELNGG GQVRVLVVGDSGVGKTSLVNLIVKGS +RP QTIGC+V V
Sbjct: 1 MFWRDRERENKELNGGVLCGQVRVLVVGDSGVGKTSLVNLIVKGSPIARPPQTIGCSVDV 60
Query: 61 KHITYGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRR 120
KHITYG+SGSSS+S+KGDSERDFFVELWD+SGHERYKDCRS+ YSQINGVIFVHDLSQRR
Sbjct: 61 KHITYGNSGSSSSSLKGDSERDFFVELWDVSGHERYKDCRSLFYSQINGVIFVHDLSQRR 120
Query: 121 TKTSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAA 180
TKTSLQKWA EIA +GTFSAPL SGGPGGLPVPY+VIGNKAD+AAK+G RGSSGNLVD A
Sbjct: 121 TKTSLQKWAAEIAATGTFSAPLGSGGPGGLPVPYIVIGNKADIAAKDGPRGSSGNLVDVA 180
Query: 181 RQWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMP 240
RQWVEKQGLLPSSEELPLTESFP GGLIAAAKEAR+DKEAV+KFFR LIRRRYFSDE+
Sbjct: 181 RQWVEKQGLLPSSEELPLTESFPSNGGLIAAAKEARHDKEAVVKFFRKLIRRRYFSDEIQ 240
Query: 241 APNP-WSISPTHKPIQRLDENSSDDDKFYSSGYSSDP--YNMLPPLPAQRNLTPPPTLYP 297
P+P WSI + QR+DEN ++DD+ Y+ +SDP YNMLPPLPAQRNLTPPPTLYP
Sbjct: 241 IPSPAWSIPSVQRQAQRIDENFTEDDQSYN---TSDPYKYNMLPPLPAQRNLTPPPTLYP 297
Query: 298 QQPVSVQENYNLPRFSLTGSQEISSSARSKRTDINV 333
QQPVSV ENY+ PRFSL+GS EIS+ AR+KR+DINV
Sbjct: 298 QQPVSVSENYSFPRFSLSGSSEISTVARTKRSDINV 333
>gi|357519651|ref|XP_003630114.1| GTP-binding protein, putative [Medicago truncatula]
gi|355524136|gb|AET04590.1| GTP-binding protein, putative [Medicago truncatula]
Length = 342
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 277/343 (80%), Positives = 304/343 (88%), Gaps = 11/343 (3%)
Query: 1 MFWKERERENKELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGV 60
MFW+ERERENKE NGG GQVRVLVVGDSGVGK+SLV+LIVKGS +RPSQTIGCTV V
Sbjct: 1 MFWRERERENKEHNGGVLCGQVRVLVVGDSGVGKSSLVHLIVKGSPIARPSQTIGCTVDV 60
Query: 61 KHITYGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRR 120
KH TYG+SGSSS+S+KGDSERDFFVELWD+SGHERYKDCRS+ YSQINGVIFVHDLSQRR
Sbjct: 61 KHTTYGNSGSSSSSLKGDSERDFFVELWDVSGHERYKDCRSLFYSQINGVIFVHDLSQRR 120
Query: 121 TKTSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAA 180
TKTSLQKWA EIA +GTFSAPL SGGPGGLPVPY+VIGNKAD+ AKEG RGSSGNLVD A
Sbjct: 121 TKTSLQKWAAEIAATGTFSAPLGSGGPGGLPVPYIVIGNKADIVAKEGARGSSGNLVDVA 180
Query: 181 RQWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMP 240
RQWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAV+KFFRMLIRRRYFSDE+P
Sbjct: 181 RQWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVIKFFRMLIRRRYFSDEIP 240
Query: 241 APNPWSISPTHKPIQRLDENSS--------DDDKFYSSGYSSDP--YNMLPPLPAQRNLT 290
AP WSI + QR+DE SS DDD+ Y++G SSDP YNMLPPLPAQRNLT
Sbjct: 241 APT-WSIPSPQRSSQRIDEISSQRIDESFIDDDQSYNAGRSSDPYKYNMLPPLPAQRNLT 299
Query: 291 PPPTLYPQQPVSVQENYNLPRFSLTGSQEISSSARSKRTDINV 333
PPPTLYPQQPVSV E+Y+ PRFSL+GS E+S+S+R+KR+DINV
Sbjct: 300 PPPTLYPQQPVSVSESYSYPRFSLSGSSEMSASSRTKRSDINV 342
>gi|225463111|ref|XP_002264573.1| PREDICTED: uncharacterized GTP-binding protein At5g64813 [Vitis
vinifera]
gi|297739357|emb|CBI29347.3| unnamed protein product [Vitis vinifera]
Length = 335
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 242/320 (75%), Positives = 269/320 (84%), Gaps = 5/320 (1%)
Query: 17 PPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIK 76
PP GQVRVLVVGDSGVGKTSLV+LI+KGSS SRP QTIGC VG+KH+TYGSS SSSNS K
Sbjct: 18 PPFGQVRVLVVGDSGVGKTSLVHLIIKGSSISRPPQTIGCMVGIKHLTYGSSSSSSNSNK 77
Query: 77 GDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
G++ERDFFVELWD+SGHERYKDCRS+ YSQING+IFVHDLSQ+RTKTSLQKWA EIA +G
Sbjct: 78 GNTERDFFVELWDVSGHERYKDCRSLFYSQINGIIFVHDLSQKRTKTSLQKWASEIAGNG 137
Query: 137 TFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEEL 196
TFSAPL S GP GLPVP++VIGNK D+A KEG RGSSGNLVD ARQWVEKQGLLPSSEEL
Sbjct: 138 TFSAPLGSAGPCGLPVPFIVIGNKVDIATKEGQRGSSGNLVDVARQWVEKQGLLPSSEEL 197
Query: 197 PLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAPNPWSISPTHKPIQR 256
PLTESFPG GGLIAAAKEAR+DKEAV KFF MLIRRRYFS+E+PAPNPWS SP P
Sbjct: 198 PLTESFPGSGGLIAAAKEARFDKEAVKKFFLMLIRRRYFSNELPAPNPWSSSPFEGPAPH 257
Query: 257 LDENSSDDDKFY-SSGYSSDP--YNMLPPLPAQRNLTPPPTLYPQQPVSVQENYNLPRFS 313
N SDDD F+ ++ S DP YN+LPPLPA RN PP PQQPVS+ +NYNLPRF+
Sbjct: 258 SSNNLSDDDVFHMNTSLSGDPYKYNILPPLPA-RNYMPPSAQRPQQPVSISDNYNLPRFT 316
Query: 314 LTGSQEISSSARSKRTDINV 333
T S SS++RSKR DIN+
Sbjct: 317 RTESPN-SSNSRSKRADINI 335
>gi|297807015|ref|XP_002871391.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297317228|gb|EFH47650.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 333
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 245/338 (72%), Positives = 281/338 (83%), Gaps = 13/338 (3%)
Query: 2 FWKERERENKELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVK 61
FW+ERERENKE P GQ+RVLVVGDSGVGK+SL++LIVKGSS RPSQTIGCTVGVK
Sbjct: 3 FWRERERENKEHVVAPLCGQIRVLVVGDSGVGKSSLLHLIVKGSSIVRPSQTIGCTVGVK 62
Query: 62 HITYGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRT 121
H+ Y S SSS+SIKGDSERDFFVELWD+SGHERYKDCRS+ YSQ+NGVIFVHDLSQRRT
Sbjct: 63 HLAYASPASSSSSIKGDSERDFFVELWDVSGHERYKDCRSLFYSQVNGVIFVHDLSQRRT 122
Query: 122 KTSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAAR 181
KT+LQKWA E++ +G FSAPL+SGGPGGLPVPY+VIGNKAD+AAKEGT GSSGNLVDAAR
Sbjct: 123 KTNLQKWAGEVSVNGAFSAPLSSGGPGGLPVPYIVIGNKADIAAKEGTSGSSGNLVDAAR 182
Query: 182 QWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPA 241
QWVEKQGLLP S+ELPL+ESFP GGLI AAKEARYDKEA+ KFF MLIRRRYFSDE+P+
Sbjct: 183 QWVEKQGLLPHSDELPLSESFPSNGGLIMAAKEARYDKEALNKFFHMLIRRRYFSDELPS 242
Query: 242 P-NPWSISPTHKPIQRLDENSSDDDKFY--SSGYSSDP--YNMLPPLPAQRNLTPPPTLY 296
P + WS+SP P QRLDE +SD+D+FY +S DP YN LP Q NLT PPTLY
Sbjct: 243 PSSAWSLSPG--PSQRLDEGTSDEDQFYKRTSLREGDPYKYNTLP----QHNLTQPPTLY 296
Query: 297 PQQPVSVQENYNLPRFSLTGSQEISS-SARSKRTDINV 333
PQQP + +Y +PRFSL+ +E ++ + RSK DINV
Sbjct: 297 PQQPPD-RYSYAIPRFSLSSVEETNNGNGRSKPMDINV 333
>gi|145357836|ref|NP_196553.2| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
gi|332004083|gb|AED91466.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
Length = 333
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 241/338 (71%), Positives = 273/338 (80%), Gaps = 13/338 (3%)
Query: 2 FWKERERENKELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVK 61
FW+ER RENKE P GQ+RVLVVGDSGVGK+SLV+LIVKGSS RPSQTIGCTVGVK
Sbjct: 3 FWRERGRENKEHMVAPLCGQIRVLVVGDSGVGKSSLVHLIVKGSSIVRPSQTIGCTVGVK 62
Query: 62 HITYGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRT 121
H+TY S SSS+ IKGDSERDFFVELWD+SGHERYKDCRS+ YSQINGVIFVHDLSQR T
Sbjct: 63 HLTYASPASSSSIIKGDSERDFFVELWDVSGHERYKDCRSLFYSQINGVIFVHDLSQRTT 122
Query: 122 KTSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAAR 181
KT+LQKWA E++ +G FSAPL+SGGPGGLPVPY+VIGNKAD+AAK GT GSSGNLVDAAR
Sbjct: 123 KTNLQKWAGEVSVTGEFSAPLSSGGPGGLPVPYIVIGNKADIAAKGGTNGSSGNLVDAAR 182
Query: 182 QWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPA 241
WVEKQGLLP S+ELPL+ESFP GLI AAKEARYDKEA+ K F MLIRRRYFSDE+P+
Sbjct: 183 HWVEKQGLLPHSDELPLSESFPSNVGLIMAAKEARYDKEALTKIFHMLIRRRYFSDELPS 242
Query: 242 P-NPWSISPTHKPIQRLDENSSDDDKFY--SSGYSSDP--YNMLPPLPAQRNLTPPPTLY 296
P + WS+S H P QRLDE +SD+D+FY +S D YN LP Q NL PTLY
Sbjct: 243 PSSAWSLS--HAPSQRLDEGTSDEDQFYKRTSLREGDAYKYNTLP----QHNLMQSPTLY 296
Query: 297 PQQPVSVQENYNLPRFSLTGSQEISS-SARSKRTDINV 333
PQQP + NY +PRFSL+ +E S+ + RSKR DINV
Sbjct: 297 PQQPPD-RYNYAIPRFSLSSVEETSNGNGRSKRMDINV 333
>gi|217426792|gb|ACK44500.1| AT5G09910-like protein [Arabidopsis arenosa]
Length = 315
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/338 (67%), Positives = 265/338 (78%), Gaps = 31/338 (9%)
Query: 2 FWKERERENKELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVK 61
FW+ER+RENKE P GQ+RVLVVGDSGVGK+SLV+LIVKGSS RPSQTIGCTVGVK
Sbjct: 3 FWRERDRENKEHIVAPLCGQIRVLVVGDSGVGKSSLVHLIVKGSSIVRPSQTIGCTVGVK 62
Query: 62 HITYGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRT 121
H+TY S SSS+SIKGDSERDFFVELWD+SGHERYKDCRS+ YSQ+NGVIFVHDLSQRRT
Sbjct: 63 HLTYASPASSSSSIKGDSERDFFVELWDVSGHERYKDCRSLFYSQVNGVIFVHDLSQRRT 122
Query: 122 KTSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAAR 181
KT+LQKWA E++ +G FSAPL+SGGPGGLPVPY+VIGNKAD+A K GT GSSGNLVDAAR
Sbjct: 123 KTNLQKWAGEVSVNGAFSAPLSSGGPGGLPVPYIVIGNKADIADKGGTSGSSGNLVDAAR 182
Query: 182 QWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPA 241
WVEKQGLLP ++ELPL+ESFP GGLI MLIRRRYFSDE+P+
Sbjct: 183 HWVEKQGLLPHNDELPLSESFPSNGGLI------------------MLIRRRYFSDELPS 224
Query: 242 P-NPWSISPTHKPIQRLDENSSDDDKFY--SSGYSSDP--YNMLPPLPAQRNLTPPPTLY 296
P + WS+SP P QRLDE +SD+D+FY +S DP YN LP Q NLT PPTLY
Sbjct: 225 PSSAWSLSP--GPSQRLDEGTSDEDQFYKRTSLREGDPYKYNTLP----QHNLTQPPTLY 278
Query: 297 PQQPVSVQENYNLPRFSLTGSQEISS-SARSKRTDINV 333
PQQP + +Y +PRFSL+ +E ++ + RSKR DINV
Sbjct: 279 PQQPPD-RYSYAIPRFSLSSVEETNNGNGRSKRMDINV 315
>gi|218184107|gb|EEC66534.1| hypothetical protein OsI_32675 [Oryza sativa Indica Group]
Length = 343
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/322 (70%), Positives = 265/322 (82%), Gaps = 8/322 (2%)
Query: 18 PTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNS--- 74
P GQVRVLVVGDSGVGK+SLV+LI+KGS+ +RP QTIGC V VKHITYGS GSSSNS
Sbjct: 24 PCGQVRVLVVGDSGVGKSSLVHLILKGSAIARPPQTIGCAVDVKHITYGSPGSSSNSTNS 83
Query: 75 IKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIAT 134
IKGD+ER+FFVELWD+SGHERYK+CRS+ YSQINGVIFV+DLSQR+TKT+L KWAVE+A
Sbjct: 84 IKGDAERNFFVELWDVSGHERYKECRSLFYSQINGVIFVYDLSQRKTKTNLNKWAVEVAE 143
Query: 135 SGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
SGTFSAPL SGGPGGLPVPY+VI NK D+A ++G R SSGNLVD ARQWVEKQGLLPSSE
Sbjct: 144 SGTFSAPLGSGGPGGLPVPYLVIANKVDIAPRDGKRVSSGNLVDVARQWVEKQGLLPSSE 203
Query: 195 ELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAPNPWSISPTHKPI 254
ELPL ESFPG GL+ AAK ARYDKEA++KFFRMLIRRRYFS+E+PAP+PWS++P I
Sbjct: 204 ELPLAESFPGNSGLLTAAKVARYDKEALVKFFRMLIRRRYFSNELPAPSPWSLTPREDTI 263
Query: 255 QRLDENSSDDDKFYSSGYS--SDPYNMLPPLPAQRNLTPPPTLYPQQPV-SVQENYNLPR 311
+ E ++DDD F Y+ S Y+ + PLPAQRNLTPPPTLYPQQP+ S ENY R
Sbjct: 264 LPV-ETTNDDDLFQRKSYAGQSYKYSGVTPLPAQRNLTPPPTLYPQQPMSSSSENYRYHR 322
Query: 312 FSLTGSQEISSSARSKRTDINV 333
FS + + SSS R+ R DIN+
Sbjct: 323 FSSSAIPDASSS-RTNRADINI 343
>gi|242034765|ref|XP_002464777.1| hypothetical protein SORBIDRAFT_01g026590 [Sorghum bicolor]
gi|241918631|gb|EER91775.1| hypothetical protein SORBIDRAFT_01g026590 [Sorghum bicolor]
Length = 339
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 234/340 (68%), Positives = 276/340 (81%), Gaps = 9/340 (2%)
Query: 1 MFWKEREREN----KELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGC 56
MFWK+ ++L+GGPP GQVRVLVVGDSGVGK+SLV+L++KGS+ +RP+QTIGC
Sbjct: 2 MFWKDGGGTGGGNGRDLSGGPPCGQVRVLVVGDSGVGKSSLVHLLLKGSAVARPAQTIGC 61
Query: 57 TVGVKHITYGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDL 116
VGVKHITY S GSSSNSIKGD+ER+FFVELWD+SGHERYKDCRS+ YSQINGVIFV+DL
Sbjct: 62 AVGVKHITYSSPGSSSNSIKGDAERNFFVELWDVSGHERYKDCRSLFYSQINGVIFVYDL 121
Query: 117 SQRRTKTSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNL 176
SQR+TKT+L KWAVE+A SGTFSAPL SGGPGGLPVPY+VI NK D+A ++G R SSGNL
Sbjct: 122 SQRKTKTNLNKWAVEVAESGTFSAPLGSGGPGGLPVPYLVIANKVDIAPRDGRRVSSGNL 181
Query: 177 VDAARQWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFS 236
VD ARQWVEKQGLLPSSEELPL +SFPG GL+ AAKE RYDKEA++KFFRMLIRRRYFS
Sbjct: 182 VDVARQWVEKQGLLPSSEELPLADSFPGNSGLLTAAKEGRYDKEALIKFFRMLIRRRYFS 241
Query: 237 DEMPAPNPWSISPTHKPIQRLDENSSDDDKFYSSGY--SSDPYNMLPPLPAQRNLTPPPT 294
+E+PAP+PWS++P I + E+ +DDD F Y S YN + PLPAQRNLTPPPT
Sbjct: 242 NELPAPSPWSLTPREDTILPV-ESVNDDDMFQRKSYGGQSYKYNGVAPLPAQRNLTPPPT 300
Query: 295 LYPQQPV-SVQENYNLPRFSLTGSQEISSSARSKRTDINV 333
LYPQQP+ S ENY RFS + S SS R+ R ++N+
Sbjct: 301 LYPQQPMSSSSENYRYHRFSSS-SIPDSSGGRTSRANLNI 339
>gi|9758969|dbj|BAB09412.1| unnamed protein product [Arabidopsis thaliana]
Length = 431
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/327 (67%), Positives = 252/327 (77%), Gaps = 25/327 (7%)
Query: 2 FWKERERENKELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVK 61
FW+ER RENKE P GQ+RVLVVGDSG SS RPSQTIGCTVGVK
Sbjct: 3 FWRERGRENKEHMVAPLCGQIRVLVVGDSG-------------SSIVRPSQTIGCTVGVK 49
Query: 62 HITYGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRT 121
H+TY S SSS+ IKGDSERDFFVELWD+SGHERYKDCRS+ YSQINGVIFVHDLSQR T
Sbjct: 50 HLTYASPASSSSIIKGDSERDFFVELWDVSGHERYKDCRSLFYSQINGVIFVHDLSQRTT 109
Query: 122 KTSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAAR 181
KT+LQKWA E++ +G FSAPL+SGGPGGLPVPY+VIGNKAD+AAK GT GSSGNLVDAAR
Sbjct: 110 KTNLQKWAGEVSVTGEFSAPLSSGGPGGLPVPYIVIGNKADIAAKGGTNGSSGNLVDAAR 169
Query: 182 QWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPA 241
WVEKQGLLP S+ELPL+ESFP GLI AAKEARYDKEA+ K F MLIRRRYFSDE+P+
Sbjct: 170 HWVEKQGLLPHSDELPLSESFPSNVGLIMAAKEARYDKEALTKIFHMLIRRRYFSDELPS 229
Query: 242 P-NPWSISPTHKPIQRLDENSSDDDKFY--SSGYSSDP--YNMLPPLPAQRNLTPPPTLY 296
P + WS+S H P QRLDE +SD+D+FY +S D YN LP Q NL PTLY
Sbjct: 230 PSSAWSLS--HAPSQRLDEGTSDEDQFYKRTSLREGDAYKYNTLP----QHNLMQSPTLY 283
Query: 297 PQQPVSVQENYNLPRFSLTGSQEISSS 323
PQQP + NY +PRFSL+ +E S++
Sbjct: 284 PQQPPD-RYNYAIPRFSLSSVEETSNA 309
>gi|357145708|ref|XP_003573738.1| PREDICTED: uncharacterized GTP-binding protein At5g64813-like
[Brachypodium distachyon]
Length = 337
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/337 (67%), Positives = 271/337 (80%), Gaps = 7/337 (2%)
Query: 2 FWKE--RERENKELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVG 59
FW++ +ELNGGPP GQVRVL+VGDSGVGK+SL +LI+K + +RP QTIGCTV
Sbjct: 3 FWRDGGASGSGRELNGGPPCGQVRVLIVGDSGVGKSSLAHLILKDFAIARPPQTIGCTVD 62
Query: 60 VKHITYGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQR 119
VKHITYGS GSSSN+IKGD+ER+FFVELWD+SGHERY+DCRS+ YSQINGVIFV+DLSQR
Sbjct: 63 VKHITYGSPGSSSNTIKGDAERNFFVELWDVSGHERYRDCRSLFYSQINGVIFVYDLSQR 122
Query: 120 RTKTSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDA 179
+TK +L KWAVE+A SGTFSAPL SGGPGGLPVPY+VI NK D+A ++G R SSGNLVD
Sbjct: 123 KTKANLSKWAVEVAESGTFSAPLGSGGPGGLPVPYLVIANKVDIAPRDGRRVSSGNLVDV 182
Query: 180 ARQWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEM 239
ARQWVEKQGLLPSSEELPL ESFPG GL+ AAKEARYDKEAV+KFFRMLIRRRYFS+E+
Sbjct: 183 ARQWVEKQGLLPSSEELPLVESFPGNSGLLTAAKEARYDKEAVVKFFRMLIRRRYFSNEL 242
Query: 240 PAPNPWSISPTHKPIQRLDENSSDDDKFYSSGY--SSDPYNMLPPLPAQRNLTPPPTLYP 297
PAP+PWS++P I + E +D++ F Y S YN + PLPAQRNLTPP T YP
Sbjct: 243 PAPSPWSLTPREDTILPV-ETVNDEELFKRKSYGGQSYKYNGVAPLPAQRNLTPPLTPYP 301
Query: 298 QQPV-SVQENYNLPRFSLTGSQEISSSARSKRTDINV 333
QQP+ S ENY R+S + S +SS+R+ R D+N+
Sbjct: 302 QQPMSSTSENYRYHRYSSS-SIPDASSSRANRLDLNL 337
>gi|212723838|ref|NP_001132705.1| uncharacterized protein LOC100194186 [Zea mays]
gi|194695148|gb|ACF81658.1| unknown [Zea mays]
gi|195634983|gb|ACG36960.1| RAB, member of RAS oncogene family-like 3 [Zea mays]
gi|223943493|gb|ACN25830.1| unknown [Zea mays]
gi|413934383|gb|AFW68934.1| putative RAB, member of RAS oncogene family-like 3 [Zea mays]
gi|413934384|gb|AFW68935.1| putative RAB, member of RAS oncogene family-like 3 [Zea mays]
Length = 339
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/340 (66%), Positives = 274/340 (80%), Gaps = 9/340 (2%)
Query: 1 MFWKEREREN----KELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGC 56
+FWK+ ++L+GGPP GQVRVLVVGDSGVGK+SLV+L++K S+ +RP+QTIGC
Sbjct: 2 LFWKDGGGTGGGNGRDLSGGPPCGQVRVLVVGDSGVGKSSLVHLLLKDSAVARPAQTIGC 61
Query: 57 TVGVKHITYGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDL 116
VGVKHITY S GSSSNS+KGD+ER+FFVELWD+SGHERYK+CRS+ YSQINGVIFV+DL
Sbjct: 62 AVGVKHITYSSPGSSSNSVKGDAERNFFVELWDVSGHERYKECRSLFYSQINGVIFVYDL 121
Query: 117 SQRRTKTSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNL 176
SQR+TKT+L KWAVE++ SGTFSAPL SGGPGGLPVPY+VI NK D+A ++G R SSGNL
Sbjct: 122 SQRKTKTNLNKWAVEVSESGTFSAPLGSGGPGGLPVPYLVIANKVDIAPRDGRRVSSGNL 181
Query: 177 VDAARQWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFS 236
VD ARQWVEKQGLLPSSE LPL ++FPG GL+ AAKEARYDKEA++KFFRMLIRRRYFS
Sbjct: 182 VDVARQWVEKQGLLPSSEVLPLADNFPGNSGLLTAAKEARYDKEALIKFFRMLIRRRYFS 241
Query: 237 DEMPAPNPWSISPTHKPIQRLDENSSDDDKFYSSGY--SSDPYNMLPPLPAQRNLTPPPT 294
+E+PAP+PWS++P I + E +DDD F Y S YN + PLPAQRNLTPPPT
Sbjct: 242 NELPAPSPWSLTPREDTILPV-ETVNDDDMFQRKSYGGQSYKYNGVTPLPAQRNLTPPPT 300
Query: 295 LYPQQPV-SVQENYNLPRFSLTGSQEISSSARSKRTDINV 333
LYPQQP+ S ENY RFS + + S ++S R ++N+
Sbjct: 301 LYPQQPMSSSSENYRYHRFSSSSIPDSSGGSKS-RANLNI 339
>gi|357113152|ref|XP_003558368.1| PREDICTED: uncharacterized GTP-binding protein At5g64813-like
[Brachypodium distachyon]
Length = 336
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/339 (64%), Positives = 265/339 (78%), Gaps = 9/339 (2%)
Query: 1 MFWKE----RERENKELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGC 56
MFWK+ ++ +E NG P GQVRVLVVGDSGVGK+SLV+LI+KGSS +RP+QT+GC
Sbjct: 1 MFWKDSSGWKDSSGREQNGVGPFGQVRVLVVGDSGVGKSSLVHLILKGSSIARPAQTVGC 60
Query: 57 TVGVKHITYGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDL 116
VG+KH+TYGS+G SSN+I D+ER+FFVELWD+SGHERYK CRSI Y+QINGVIFV+DL
Sbjct: 61 AVGIKHVTYGSAGGSSNNISNDAERNFFVELWDVSGHERYKACRSIFYTQINGVIFVYDL 120
Query: 117 SQRRTKTSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNL 176
SQR+TKT+L KWAVE+A +GTFSAPL SGGPGGLPVPY+VI NK D ++GTR SG++
Sbjct: 121 SQRKTKTNLNKWAVEVAETGTFSAPLGSGGPGGLPVPYLVIANKVDTVPRDGTRVRSGSI 180
Query: 177 VDAARQWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFS 236
VD ARQW+EKQGLLP SEELPLTESFPG GL++AAKEARYDKEAV+KFFRMLIRRRYFS
Sbjct: 181 VDVARQWIEKQGLLPCSEELPLTESFPGNSGLVSAAKEARYDKEAVIKFFRMLIRRRYFS 240
Query: 237 DEMPAPNPWSISPTHKPIQRLDENSSDDDKFYSSGYSSDPY--NMLPPLPAQRNLTPPPT 294
+E P+PWS++P + L + DD F YS + + N + PLPAQ NLTPPPT
Sbjct: 241 NEPATPSPWSLTPREDTV--LPVATLKDDNFQRKSYSGEEFTINGVSPLPAQWNLTPPPT 298
Query: 295 LYPQQPVSVQENYNLPRFSLTGSQEISSSARSKRTDINV 333
L PQ PVS +NY RFS E+S++ R+ R I+V
Sbjct: 299 LDPQLPVSSSDNYRYHRFSSPSLAEMSNN-RTSREHIDV 336
>gi|115481048|ref|NP_001064117.1| Os10g0135200 [Oryza sativa Japonica Group]
gi|78707722|gb|ABB46697.1| GTP-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113638726|dbj|BAF26031.1| Os10g0135200 [Oryza sativa Japonica Group]
gi|215686936|dbj|BAG90806.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222612401|gb|EEE50533.1| hypothetical protein OsJ_30642 [Oryza sativa Japonica Group]
Length = 343
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 228/322 (70%), Positives = 265/322 (82%), Gaps = 8/322 (2%)
Query: 18 PTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSI-- 75
P GQVRVLVVGDSGVGK+SLV+LI+KGS+ +RP QTIGC V VKHITYGS GSSSNSI
Sbjct: 24 PCGQVRVLVVGDSGVGKSSLVHLILKGSAIARPPQTIGCAVDVKHITYGSPGSSSNSINS 83
Query: 76 -KGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIAT 134
KGD+ER+FFVELWD+SGHERYK+CRS+ YSQINGVIFV+DLSQR+TKT+L KWAVE+A
Sbjct: 84 IKGDAERNFFVELWDVSGHERYKECRSLFYSQINGVIFVYDLSQRKTKTNLNKWAVEVAE 143
Query: 135 SGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
SGTFSAPL SGGPGGLPVPY+VI NK D+A ++G R SSGNLVD ARQWVEKQGLLPSSE
Sbjct: 144 SGTFSAPLGSGGPGGLPVPYLVIANKVDIAPRDGKRVSSGNLVDVARQWVEKQGLLPSSE 203
Query: 195 ELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAPNPWSISPTHKPI 254
ELPL ESFPG GL+ AAK ARYDKEA++KFFRMLIRRRYFS+E+PAP+PWS++P I
Sbjct: 204 ELPLAESFPGNSGLLTAAKVARYDKEALVKFFRMLIRRRYFSNELPAPSPWSLTPREDTI 263
Query: 255 QRLDENSSDDDKFYSSGYS--SDPYNMLPPLPAQRNLTPPPTLYPQQPV-SVQENYNLPR 311
+ E ++DDD F Y+ S Y+ + PLPAQRNLTPPPTLYPQQP+ S ENY R
Sbjct: 264 LPV-ETTNDDDLFQRKSYAGQSYKYSGVTPLPAQRNLTPPPTLYPQQPMSSSSENYRYHR 322
Query: 312 FSLTGSQEISSSARSKRTDINV 333
FS + + SSS R+ R DIN+
Sbjct: 323 FSSSAIPDASSS-RTNRADINI 343
>gi|326503996|dbj|BAK02784.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 340
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/341 (62%), Positives = 259/341 (75%), Gaps = 9/341 (2%)
Query: 1 MFWKEREREN------KELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTI 54
MFWK+ + ++ +G P GQVRVLVVGDSGVGK+SLV+LI++GS+ +RP+QT
Sbjct: 1 MFWKDSSGRSSSSSGREQQSGVGPFGQVRVLVVGDSGVGKSSLVHLILEGSAIARPAQTG 60
Query: 55 GCTVGVKHITYGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVH 114
GC VG+KH+T GS+G SSN+I D+ER+FFVELWD+SGH+RYK CRSI Y+QINGVIFV+
Sbjct: 61 GCVVGIKHVTCGSAGGSSNNISNDAERNFFVELWDVSGHDRYKACRSIFYTQINGVIFVY 120
Query: 115 DLSQRRTKTSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSG 174
DLSQR TKT+L KWAVE+A +GTFSA L SGGPGGLPVPY+VI NK D+ +GTR SG
Sbjct: 121 DLSQRETKTNLNKWAVEVAETGTFSAILGSGGPGGLPVPYLVIANKVDIVPSDGTRVRSG 180
Query: 175 NLVDAARQWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRY 234
+++D ARQW+EK+GLLP SEELPLTESFPG GLI+AAKEARYDKEAV KFFRMLIRRRY
Sbjct: 181 SIIDVARQWIEKRGLLPRSEELPLTESFPGNSGLISAAKEARYDKEAVTKFFRMLIRRRY 240
Query: 235 FSDEMPAPNPWSISPTHKPIQRLDENSSDDDKFYSSGYSSDP--YNMLPPLPAQRNLTPP 292
FS+E PAP+PWS++P I + D D F YS + +N +PPLPAQRNL PP
Sbjct: 241 FSNEPPAPSPWSLTPREDNILPVVTRKDDTDSFQRKSYSGEDFMFNGVPPLPAQRNLPPP 300
Query: 293 PTLYPQQPVSVQENYNLPRFSLTGSQEISSSARSKRTDINV 333
PTL PQ PV +N RFS EIS++ R+ R + NV
Sbjct: 301 PTLDPQLPVFSSDNNRYHRFSSPSLTEISNN-RTSRENFNV 340
>gi|115451843|ref|NP_001049522.1| Os03g0242200 [Oryza sativa Japonica Group]
gi|108707109|gb|ABF94904.1| GTP-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113547993|dbj|BAF11436.1| Os03g0242200 [Oryza sativa Japonica Group]
Length = 338
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/339 (63%), Positives = 261/339 (76%), Gaps = 7/339 (2%)
Query: 1 MFWKERERENK------ELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTI 54
MFWK+ + E NG P GQVRVLVVGDSGVGK+SLV+LI+KGS+ +RP+QT+
Sbjct: 1 MFWKDSGGRSSGGGGGLEQNGVGPFGQVRVLVVGDSGVGKSSLVHLILKGSAIARPAQTV 60
Query: 55 GCTVGVKHITYGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVH 114
GC VGVKHITYGS+G SSN+I D +R+FFVELWD+SGHERY+ CRSI Y+QINGVIFV+
Sbjct: 61 GCAVGVKHITYGSAGGSSNNIISDVQRNFFVELWDVSGHERYRTCRSIFYTQINGVIFVY 120
Query: 115 DLSQRRTKTSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSG 174
DLSQR+TKT+L KWAVE+A +GTFSAPL SGGPGGLPVPY+VI NK D+ ++G+R SSG
Sbjct: 121 DLSQRKTKTNLNKWAVEVAETGTFSAPLGSGGPGGLPVPYLVIANKVDLVPRDGSRVSSG 180
Query: 175 NLVDAARQWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRY 234
+LVD ARQWVEKQGLLPSSEELPLT+SFPG GL++AAKEARYDKEAV+KFFRMLIRRR+
Sbjct: 181 SLVDFARQWVEKQGLLPSSEELPLTDSFPGNSGLLSAAKEARYDKEAVIKFFRMLIRRRF 240
Query: 235 FSDEMPAPNPWSISPTHKPIQRLDENSSDDDKFYSSGYSSDPYNMLPPLPAQRNLTPPPT 294
FS+E AP+PWS++P I ++ + D F Y + PLPAQRNL PP
Sbjct: 241 FSNEPAAPSPWSLTPREDSILPVETLKDEVDSFQRKSGEDFMYKGVNPLPAQRNLASPPD 300
Query: 295 LYPQQPVSVQENYNLPRFSLTGSQEISSSARSKRTDINV 333
L PQQPV +NY R+S ++SSS R+ R DI+V
Sbjct: 301 LSPQQPVFSLDNYRYHRYSSPSLPDVSSS-RTSREDIDV 338
>gi|194696352|gb|ACF82260.1| unknown [Zea mays]
gi|413956380|gb|AFW89029.1| RAB, member of RAS oncogene family-like 3 [Zea mays]
Length = 339
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/338 (64%), Positives = 262/338 (77%), Gaps = 9/338 (2%)
Query: 1 MFWKERERENK-----ELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIG 55
MFWK+ + + NG P GQVRVL+VGDSGVGK+SLV+LI+K S+ +RPSQT+G
Sbjct: 1 MFWKDSGSRSSSGSGRDQNGVGPFGQVRVLIVGDSGVGKSSLVHLILKSSAIARPSQTVG 60
Query: 56 CTVGVKHITYGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHD 115
CTVG+KH+TYGS+G SSN+I D+ER+FFVELWD+SGHERYK CRSI Y+QINGVIFV+D
Sbjct: 61 CTVGIKHVTYGSAGGSSNNIS-DAERNFFVELWDVSGHERYKACRSIFYTQINGVIFVYD 119
Query: 116 LSQRRTKTSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGN 175
LSQR+TKT+L KWAVE+A +GTFSAPL SGGPGGLPVPY+VI NK D+ ++G R S GN
Sbjct: 120 LSQRKTKTNLNKWAVEVAETGTFSAPLGSGGPGGLPVPYLVIANKVDIVPRDGARASRGN 179
Query: 176 LVDAARQWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYF 235
LVD ARQW EKQGLL SEELPLTESFPG GL++AAK+ARYDKEAV+KFFR+LIRRRYF
Sbjct: 180 LVDLARQWAEKQGLLRCSEELPLTESFPGNSGLVSAAKQARYDKEAVIKFFRLLIRRRYF 239
Query: 236 SDEMPAPNPWSISPTHKPIQRLDENSSDDDKFYSSGYSSD--PYNMLPPLPAQRNLTPPP 293
S+E PAP+PWS++P I ++ D F S + YN L PLPAQRNLTPPP
Sbjct: 240 SNEPPAPSPWSLAPREDTILPMETLGDGADSFQRKSLSGEGFLYNGLVPLPAQRNLTPPP 299
Query: 294 TLYPQQPVSVQENYNLPRFSLTGSQEISSSARSKRTDI 331
TL PQQPVS +NY RFS + S SS+R+ R DI
Sbjct: 300 TLNPQQPVSPLDNYRYHRFSSS-SLPDVSSSRTSREDI 336
>gi|226497240|ref|NP_001150916.1| RAB, member of RAS oncogene family-like 3 [Zea mays]
gi|195642936|gb|ACG40936.1| RAB, member of RAS oncogene family-like 3 [Zea mays]
Length = 339
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/340 (63%), Positives = 262/340 (77%), Gaps = 8/340 (2%)
Query: 1 MFWKERERENK-----ELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIG 55
MFWK+ + + NG P GQVRVL+VGDSGVGK+SLV+LI+K S+ +RPSQT+G
Sbjct: 1 MFWKDSGSRSSSGSGRDQNGVGPFGQVRVLIVGDSGVGKSSLVHLILKSSAIARPSQTVG 60
Query: 56 CTVGVKHITYGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHD 115
CTVG+KH+TYGS+G SSN+I D+ER+FFVELWD+SGHERYK CRSI Y+QINGVIFV+D
Sbjct: 61 CTVGIKHVTYGSAGGSSNNIS-DAERNFFVELWDVSGHERYKACRSIFYTQINGVIFVYD 119
Query: 116 LSQRRTKTSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGN 175
LSQR+TKT+L KWAVE+A +GTFSAPL SGGPGGLPVPY+VI NK D+ ++G R S GN
Sbjct: 120 LSQRKTKTNLNKWAVEVAETGTFSAPLGSGGPGGLPVPYLVIANKVDIVPRDGARASRGN 179
Query: 176 LVDAARQWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYF 235
LVD ARQW EKQGLL SEELPLTESFPG GL++AAK+ARYDKE V+KFFR+LIRRRYF
Sbjct: 180 LVDLARQWAEKQGLLRCSEELPLTESFPGNSGLVSAAKQARYDKEVVIKFFRLLIRRRYF 239
Query: 236 SDEMPAPNPWSISPTHKPIQRLDENSSDDDKFYSSGYSSD--PYNMLPPLPAQRNLTPPP 293
S+E PAP+PWS++P I ++ D F S + YN L PLPAQRNLTPPP
Sbjct: 240 SNEPPAPSPWSLAPREDTILPMETLGDGADSFQRKSLSGEGFLYNGLVPLPAQRNLTPPP 299
Query: 294 TLYPQQPVSVQENYNLPRFSLTGSQEISSSARSKRTDINV 333
TL PQQPVS +NY RFS + ++SSS S+ IN+
Sbjct: 300 TLNPQQPVSPLDNYRYHRFSSSSLPDVSSSRTSREDIINL 339
>gi|15528856|gb|AAL01181.1|AC079843_21 Putative GTP-BINDING PROTEIN YPTV3 [Oryza sativa Japonica Group]
Length = 354
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 227/333 (68%), Positives = 263/333 (78%), Gaps = 19/333 (5%)
Query: 18 PTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVK-----------HITYG 66
P GQVRVLVVGDSGVGK+SLV+LI+KGS+ +RP QTIGC V VK HITYG
Sbjct: 24 PCGQVRVLVVGDSGVGKSSLVHLILKGSAIARPPQTIGCAVDVKYIFIEVFPQFQHITYG 83
Query: 67 SSGSSSNSI---KGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKT 123
S GSSSNSI KGD+ER+FFVELWD+SGHERYK+CRS+ YSQINGVIFV+DLSQR+TKT
Sbjct: 84 SPGSSSNSINSIKGDAERNFFVELWDVSGHERYKECRSLFYSQINGVIFVYDLSQRKTKT 143
Query: 124 SLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQW 183
+L KWAVE+A SGTFSAPL SGGPGGLPVPY+VI NK D+A ++G R SSGNLVD ARQW
Sbjct: 144 NLNKWAVEVAESGTFSAPLGSGGPGGLPVPYLVIANKVDIAPRDGKRVSSGNLVDVARQW 203
Query: 184 VEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAPN 243
VEKQGLLPSSEELPL ESFPG GL+ AAK ARYDKEA++KFFRMLIRRRYFS+E+PAP+
Sbjct: 204 VEKQGLLPSSEELPLAESFPGNSGLLTAAKVARYDKEALVKFFRMLIRRRYFSNELPAPS 263
Query: 244 PWSISPTHKPIQRLDENSSDDDKFYSSGYSSDPYNM--LPPLPAQRNLTPPPTLYPQQPV 301
PWS++P I + E ++DDD F Y+ Y + PLPAQRNLTPPPTLYPQQP+
Sbjct: 264 PWSLTPREDTILPV-ETTNDDDLFQRKSYAGQSYKYSGVTPLPAQRNLTPPPTLYPQQPM 322
Query: 302 -SVQENYNLPRFSLTGSQEISSSARSKRTDINV 333
S ENY RFS + + SSS R+ R DIN+
Sbjct: 323 SSSSENYRYHRFSSSAIPDASSS-RTNRADINI 354
>gi|242041587|ref|XP_002468188.1| hypothetical protein SORBIDRAFT_01g041370 [Sorghum bicolor]
gi|241922042|gb|EER95186.1| hypothetical protein SORBIDRAFT_01g041370 [Sorghum bicolor]
Length = 339
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/338 (64%), Positives = 263/338 (77%), Gaps = 9/338 (2%)
Query: 1 MFWKER-----ERENKELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIG 55
MFWK+ ++ NG P GQVRVL+VGDSGVGK+SL++LI+K S+ +RP+QT+G
Sbjct: 1 MFWKDSGSRSSSGSGRDQNGVGPFGQVRVLIVGDSGVGKSSLLHLILKSSAIARPAQTVG 60
Query: 56 CTVGVKHITYGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHD 115
CTVGVKH+TYGS+G SSN+I D+ER+FFVEL D+SGHERYK CRSI Y+QINGVIFV+D
Sbjct: 61 CTVGVKHVTYGSAGGSSNNIS-DAERNFFVELLDVSGHERYKACRSIFYTQINGVIFVYD 119
Query: 116 LSQRRTKTSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGN 175
LSQR+TKT+L KWAVE+A +GTFSAPL SGGPGGLPVPY+VI NK D+ ++GTR S GN
Sbjct: 120 LSQRKTKTNLNKWAVEVAETGTFSAPLGSGGPGGLPVPYLVIANKVDIVPRDGTRASRGN 179
Query: 176 LVDAARQWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYF 235
LVD ARQW EKQGLL SEELPLTESFPG GL++AAK+ARYDKEAV+KFFR+LIRRRYF
Sbjct: 180 LVDLARQWAEKQGLLRCSEELPLTESFPGNSGLVSAAKQARYDKEAVIKFFRLLIRRRYF 239
Query: 236 SDEMPAPNPWSISPTHKPIQRLDENSSDDDKFYSSGYSSD--PYNMLPPLPAQRNLTPPP 293
S+E PAP+PWS++P I ++ D F S D YN + PLPAQRNLTPPP
Sbjct: 240 SNEPPAPSPWSLTPREDTILPVESLGGGVDSFQRKSLSGDGFLYNGVVPLPAQRNLTPPP 299
Query: 294 TLYPQQPVSVQENYNLPRFSLTGSQEISSSARSKRTDI 331
TL PQQPVS +NY RFS + ++SS+ R+ R DI
Sbjct: 300 TLNPQQPVSSLDNYRYHRFSSSSLPDVSSN-RTSREDI 336
>gi|218192419|gb|EEC74846.1| hypothetical protein OsI_10708 [Oryza sativa Indica Group]
Length = 379
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/380 (56%), Positives = 261/380 (68%), Gaps = 48/380 (12%)
Query: 1 MFWKERERENK------ELNGGPPTGQVRVLVVGDS------------------------ 30
MFWK+ + E NG P GQVRVLVVGDS
Sbjct: 1 MFWKDNGGRSSGGGGGLEQNGVGPFGQVRVLVVGDSVLQLFTKKVCSVLTNLGWNCAIFL 60
Query: 31 -----------------GVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSN 73
GVGK+SLV+LI+KGS+ +RP+QT+GC VGVKHITYGS+G SSN
Sbjct: 61 SLKTWDTKEELGTKEAVGVGKSSLVHLILKGSAIARPAQTVGCAVGVKHITYGSAGGSSN 120
Query: 74 SIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIA 133
+I D +R+FFVELWD+SGHERY+ CRSI Y+QINGVIFV+DLSQR+TKT+L KWAVE+A
Sbjct: 121 NIISDVQRNFFVELWDVSGHERYRTCRSIFYTQINGVIFVYDLSQRKTKTNLNKWAVEVA 180
Query: 134 TSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSS 193
+GTFSAPL SGGPGGLPVPY+VI NK D+ ++G+R SSG+LVD ARQWVEKQGLLPSS
Sbjct: 181 ETGTFSAPLGSGGPGGLPVPYLVIANKVDLVPRDGSRVSSGSLVDFARQWVEKQGLLPSS 240
Query: 194 EELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAPNPWSISPTHKP 253
EELPLT+SFPG GL++AAKEARYDKEAV+KFFRMLIRRR+FS+E AP+PWS++P
Sbjct: 241 EELPLTDSFPGNSGLLSAAKEARYDKEAVIKFFRMLIRRRFFSNEPAAPSPWSLTPREDS 300
Query: 254 IQRLDENSSDDDKFYSSGYSSDPYNMLPPLPAQRNLTPPPTLYPQQPVSVQENYNLPRFS 313
I ++ + D F Y + PLPAQRNL PP L PQQPV +NY R+S
Sbjct: 301 ILPVETLKDEVDSFQRKSGEDFMYKGVNPLPAQRNLASPPDLSPQQPVFSLDNYRYHRYS 360
Query: 314 LTGSQEISSSARSKRTDINV 333
++SSS R+ R DI+V
Sbjct: 361 SPSLPDVSSS-RTSREDIDV 379
>gi|222624543|gb|EEE58675.1| hypothetical protein OsJ_10098 [Oryza sativa Japonica Group]
Length = 379
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/380 (56%), Positives = 261/380 (68%), Gaps = 48/380 (12%)
Query: 1 MFWKERERENK------ELNGGPPTGQVRVLVVGDS------------------------ 30
MFWK+ + E NG P GQVRVLVVGDS
Sbjct: 1 MFWKDSGGRSSGGGGGLEQNGVGPFGQVRVLVVGDSVLQLFTKKVCSVLTNLGWNCAIFL 60
Query: 31 -----------------GVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSN 73
GVGK+SLV+LI+KGS+ +RP+QT+GC VGVKHITYGS+G SSN
Sbjct: 61 SLKTWDTKEELGTKEAVGVGKSSLVHLILKGSAIARPAQTVGCAVGVKHITYGSAGGSSN 120
Query: 74 SIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIA 133
+I D +R+FFVELWD+SGHERY+ CRSI Y+QINGVIFV+DLSQR+TKT+L KWAVE+A
Sbjct: 121 NIISDVQRNFFVELWDVSGHERYRTCRSIFYTQINGVIFVYDLSQRKTKTNLNKWAVEVA 180
Query: 134 TSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSS 193
+GTFSAPL SGGPGGLPVPY+VI NK D+ ++G+R SSG+LVD ARQWVEKQGLLPSS
Sbjct: 181 ETGTFSAPLGSGGPGGLPVPYLVIANKVDLVPRDGSRVSSGSLVDFARQWVEKQGLLPSS 240
Query: 194 EELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAPNPWSISPTHKP 253
EELPLT+SFPG GL++AAKEARYDKEAV+KFFRMLIRRR+FS+E AP+PWS++P
Sbjct: 241 EELPLTDSFPGNSGLLSAAKEARYDKEAVIKFFRMLIRRRFFSNEPAAPSPWSLTPREDS 300
Query: 254 IQRLDENSSDDDKFYSSGYSSDPYNMLPPLPAQRNLTPPPTLYPQQPVSVQENYNLPRFS 313
I ++ + D F Y + PLPAQRNL PP L PQQPV +NY R+S
Sbjct: 301 ILPVETLKDEVDSFQRKSGEDFMYKGVNPLPAQRNLASPPDLSPQQPVFSLDNYRYHRYS 360
Query: 314 LTGSQEISSSARSKRTDINV 333
++SSS R+ R DI+V
Sbjct: 361 SPSLPDVSSS-RTSREDIDV 379
>gi|413956379|gb|AFW89028.1| hypothetical protein ZEAMMB73_314161 [Zea mays]
Length = 256
Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 164/234 (70%), Positives = 197/234 (84%), Gaps = 6/234 (2%)
Query: 1 MFWKERERENK-----ELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIG 55
MFWK+ + + NG P GQVRVL+VGDSGVGK+SLV+LI+K S+ +RPSQT+G
Sbjct: 1 MFWKDSGSRSSSGSGRDQNGVGPFGQVRVLIVGDSGVGKSSLVHLILKSSAIARPSQTVG 60
Query: 56 CTVGVKHITYGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHD 115
CTVG+KH+TYGS+G SSN+I D+ER+FFVELWD+SGHERYK CRSI Y+QINGVIFV+D
Sbjct: 61 CTVGIKHVTYGSAGGSSNNIS-DAERNFFVELWDVSGHERYKACRSIFYTQINGVIFVYD 119
Query: 116 LSQRRTKTSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGN 175
LSQR+TKT+L KWAVE+A +GTFSAPL SGGPGGLPVPY+VI NK D+ ++G R S GN
Sbjct: 120 LSQRKTKTNLNKWAVEVAETGTFSAPLGSGGPGGLPVPYLVIANKVDIVPRDGARASRGN 179
Query: 176 LVDAARQWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRML 229
LVD ARQW EKQGLL SEELPLTESFPG GL++AAK+ARYDKEAV+KFFR++
Sbjct: 180 LVDLARQWAEKQGLLRCSEELPLTESFPGNSGLVSAAKQARYDKEAVIKFFRLV 233
>gi|302757293|ref|XP_002962070.1| LIP1, ras family GTPase [Selaginella moellendorffii]
gi|300170729|gb|EFJ37330.1| LIP1, ras family GTPase [Selaginella moellendorffii]
Length = 266
Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 147/221 (66%), Positives = 174/221 (78%), Gaps = 7/221 (3%)
Query: 17 PPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIK 76
PPTGQVRVL+VGD+GVGK+SL LIV GS ++TIGCTV VKHI + S GS +NS +
Sbjct: 11 PPTGQVRVLIVGDAGVGKSSLAQLIVDGSCGKDVARTIGCTVHVKHIQHTSEGSLANSFQ 70
Query: 77 GDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
DFFVELWD+SG+E YKDCRS+ YSQING+IFVHDLSQR+TK+SLQKWA E+A+ G
Sbjct: 71 -----DFFVELWDVSGNEWYKDCRSLFYSQINGIIFVHDLSQRKTKSSLQKWAREVASLG 125
Query: 137 TFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEEL 196
FSAPL S G G +PVP++VIGNKAD+A K G GSSGNLVDAAR WVEKQGLL ++EL
Sbjct: 126 HFSAPLPSSGMGLVPVPFLVIGNKADIAPKAG--GSSGNLVDAARHWVEKQGLLSPTDEL 183
Query: 197 PLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSD 237
P +E+FPG GL AAAK+ D EA+ FF MLIRRRYF +
Sbjct: 184 PTSETFPGTQGLRAAAKDGELDMEAIDDFFSMLIRRRYFGE 224
>gi|302775196|ref|XP_002971015.1| LIP1, ras family GTPase [Selaginella moellendorffii]
gi|300160997|gb|EFJ27613.1| LIP1, ras family GTPase [Selaginella moellendorffii]
Length = 263
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 143/221 (64%), Positives = 171/221 (77%), Gaps = 10/221 (4%)
Query: 17 PPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIK 76
PPTGQVRVL+VGD+GVGK+SL LIV GS ++TIGCTV VKHI + +
Sbjct: 11 PPTGQVRVLIVGDAGVGKSSLAQLIVDGSCGKDVARTIGCTVHVKHIQH--------TTL 62
Query: 77 GDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
+S +DFFVELWD+SG+E YKDCRS+ YSQING+IFVHDLSQR+TK+SLQKWA E+A+ G
Sbjct: 63 ANSFQDFFVELWDVSGNEWYKDCRSLFYSQINGIIFVHDLSQRKTKSSLQKWAREVASLG 122
Query: 137 TFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEEL 196
FSAPL S G G +PVP++VIGNKAD+A K G GSSGNLVDAAR WVEKQGLL ++EL
Sbjct: 123 HFSAPLPSSGMGLVPVPFLVIGNKADIAPKAG--GSSGNLVDAARHWVEKQGLLSPTDEL 180
Query: 197 PLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSD 237
P +E+FPG GL AAAK+ D EA+ FF MLIRRRYF +
Sbjct: 181 PTSETFPGTQGLRAAAKDGELDMEAIDDFFSMLIRRRYFGE 221
>gi|8843745|dbj|BAA97293.1| unnamed protein product [Arabidopsis thaliana]
Length = 651
Score = 278 bits (710), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 135/188 (71%), Positives = 157/188 (83%), Gaps = 6/188 (3%)
Query: 146 GPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSS-EELPLTESFPG 204
GPGGLPVPY+V+GNKAD+AAKEGT+GSSGNLVDAAR WVEKQGLLPSS E+LPL ESFPG
Sbjct: 266 GPGGLPVPYIVVGNKADIAAKEGTKGSSGNLVDAARHWVEKQGLLPSSSEDLPLFESFPG 325
Query: 205 GGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAPNPWSISPT-HKPIQRLDENSSD 263
GGLIAAAKE RYDKEA+ KFFRMLIRRRYFSDE+PA +PWSISP QRLDE +SD
Sbjct: 326 NGGLIAAAKETRYDKEALNKFFRMLIRRRYFSDELPAASPWSISPVPTSSSQRLDEITSD 385
Query: 264 DDKFYS-SGYSSDPY---NMLPPLPAQRNLTPPPTLYPQQPVSVQENYNLPRFSLTGSQE 319
DD+FY + + DPY N +PPLPAQRNLTPPPTLYPQQPVS +NY +PR+SL+ QE
Sbjct: 386 DDQFYKRTSFHGDPYKYNNTIPPLPAQRNLTPPPTLYPQQPVSTPDNYTIPRYSLSSVQE 445
Query: 320 ISSSARSK 327
+++ ++
Sbjct: 446 TTNNGSAR 453
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/76 (78%), Positives = 64/76 (84%)
Query: 2 FWKERERENKELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVK 61
FW+ERERENKE P GQVRVLVVGDSGVGKTSLV+LI KGSS RP QTIGCTVGVK
Sbjct: 191 FWRERERENKEQILAPLCGQVRVLVVGDSGVGKTSLVHLINKGSSIVRPPQTIGCTVGVK 250
Query: 62 HITYGSSGSSSNSIKG 77
HITYGS SSS+SI+G
Sbjct: 251 HITYGSPASSSSSIQG 266
>gi|110288582|gb|ABG65900.1| GTP-binding protein, putative, expressed [Oryza sativa Japonica
Group]
Length = 269
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/226 (64%), Positives = 172/226 (76%), Gaps = 6/226 (2%)
Query: 111 IFVHDLSQRRTKTSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTR 170
F+ L R+TKT+L KWAVE+A SGTFSAPL SGGPGGLPVPY+VI NK D+A ++G R
Sbjct: 47 FFILKL-MRKTKTNLNKWAVEVAESGTFSAPLGSGGPGGLPVPYLVIANKVDIAPRDGKR 105
Query: 171 GSSGNLVDAARQWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLI 230
SSGNLVD ARQWVEKQGLLPSSEELPL ESFPG GL+ AAK ARYDKEA++KFFRMLI
Sbjct: 106 VSSGNLVDVARQWVEKQGLLPSSEELPLAESFPGNSGLLTAAKVARYDKEALVKFFRMLI 165
Query: 231 RRRYFSDEMPAPNPWSISPTHKPIQRLDENSSDDDKFYSSGYSSDPYNM--LPPLPAQRN 288
RRRYFS+E+PAP+PWS++P I + E ++DDD F Y+ Y + PLPAQRN
Sbjct: 166 RRRYFSNELPAPSPWSLTPREDTILPV-ETTNDDDLFQRKSYAGQSYKYSGVTPLPAQRN 224
Query: 289 LTPPPTLYPQQPV-SVQENYNLPRFSLTGSQEISSSARSKRTDINV 333
LTPPPTLYPQQP+ S ENY RFS + + SSS R+ R DIN+
Sbjct: 225 LTPPPTLYPQQPMSSSSENYRYHRFSSSAIPDASSS-RTNRADINI 269
>gi|217074352|gb|ACJ85536.1| unknown [Medicago truncatula]
Length = 197
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 143/177 (80%), Positives = 159/177 (89%)
Query: 1 MFWKERERENKELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGV 60
MFW+ERERENKE NGG GQVRVLVVGDSGVGK+SLV+LIVKGS +RPSQTIGCTVGV
Sbjct: 1 MFWRERERENKEHNGGVLCGQVRVLVVGDSGVGKSSLVHLIVKGSPIARPSQTIGCTVGV 60
Query: 61 KHITYGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRR 120
KH TYG+SGSSS+S+KGDSERDFFVELWD+SGHERYKDCRS+ YSQINGVIFVHDLSQRR
Sbjct: 61 KHTTYGNSGSSSSSLKGDSERDFFVELWDVSGHERYKDCRSLFYSQINGVIFVHDLSQRR 120
Query: 121 TKTSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV 177
TKTSLQKWA EIA +GTFSAPL SGGPGGLPVPY+VIGNKAD+ K+ ++G L+
Sbjct: 121 TKTSLQKWAAEIAATGTFSAPLGSGGPGGLPVPYIVIGNKADIVQKKVREEAAGILL 177
>gi|224032191|gb|ACN35171.1| unknown [Zea mays]
gi|413934382|gb|AFW68933.1| hypothetical protein ZEAMMB73_199267 [Zea mays]
Length = 247
Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 142/226 (62%), Positives = 172/226 (76%), Gaps = 6/226 (2%)
Query: 111 IFVHDLSQRRTKTSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTR 170
F+H L R+TKT+L KWAVE++ SGTFSAPL SGGPGGLPVPY+VI NK D+A ++G R
Sbjct: 25 FFIHKL-MRKTKTNLNKWAVEVSESGTFSAPLGSGGPGGLPVPYLVIANKVDIAPRDGRR 83
Query: 171 GSSGNLVDAARQWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLI 230
SSGNLVD ARQWVEKQGLLPSSE LPL ++FPG GL+ AAKEARYDKEA++KFFRMLI
Sbjct: 84 VSSGNLVDVARQWVEKQGLLPSSEVLPLADNFPGNSGLLTAAKEARYDKEALIKFFRMLI 143
Query: 231 RRRYFSDEMPAPNPWSISPTHKPIQRLDENSSDDDKFYSSGY--SSDPYNMLPPLPAQRN 288
RRRYFS+E+PAP+PWS++P I + E +DDD F Y S YN + PLPAQRN
Sbjct: 144 RRRYFSNELPAPSPWSLTPREDTILPV-ETVNDDDMFQRKSYGGQSYKYNGVTPLPAQRN 202
Query: 289 LTPPPTLYPQQPV-SVQENYNLPRFSLTGSQEISSSARSKRTDINV 333
LTPPPTLYPQQP+ S ENY RFS + + S ++S R ++N+
Sbjct: 203 LTPPPTLYPQQPMSSSSENYRYHRFSSSSIPDSSGGSKS-RANLNI 247
>gi|145350209|ref|XP_001419507.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579739|gb|ABO97800.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 296
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/257 (38%), Positives = 127/257 (49%), Gaps = 50/257 (19%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRP--SQTIGCTVGVKHITY-GSSGSSSNSIKG 77
+VRVLV+GDSG GKT+L +V G R +T GC+ V + G+ G++
Sbjct: 14 KVRVLVIGDSGAGKTTLTRALVGGGRRGREEHGRTSGCSAEVMRASEEGAEGTTGT---- 69
Query: 78 DSERD---FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIAT 134
RD +FVELWD+ GH +YK R I Y QINGVI VHD S R + + WA E+AT
Sbjct: 70 ---RDAATYFVELWDVGGHRQYKRERGIFYDQINGVIIVHDASMRASGARCEAWAREVAT 126
Query: 135 SGTFSAP------LASG-------GPGGLPVPYVVIGNKADV--AAKEGTRGSSGNLVDA 179
GTFSAP ASG G GGLPVP +++ NK D+ AA +G G L A
Sbjct: 127 RGTFSAPTPTAESFASGEQPCVMYGFGGLPVPCLIVANKVDLESAANDGFGRGDGLLRRA 186
Query: 180 ARQWVEK----QGLLPS------------------SEELPLTESFPGGGGLIAAAKEARY 217
+ +K + +LP S P GGGL +A R
Sbjct: 187 LDFFGDKSRRRRSILPETIGEAARASASAAHRRQPSFGATALAKLPPGGGLRTSATLGRI 246
Query: 218 DKEAVMKFFRMLIRRRY 234
D + + FFR L+RRRY
Sbjct: 247 DVDVMHGFFRELVRRRY 263
>gi|384252210|gb|EIE25686.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 356
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/240 (37%), Positives = 123/240 (51%), Gaps = 44/240 (18%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
VR+L+VG++G GKT + +L+ GS QT+GC+ V + SG S++ +R
Sbjct: 21 VRILIVGNAGAGKTCIAHLMATGSPAKGVRQTVGCSTSVVLVEPADSGGLSDA----RQR 76
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F+ELWDI HERYK RS Y+ I+GVI V D + R++ S++KWA E+A G F AP
Sbjct: 77 PIFIELWDIGAHERYKTLRSSFYADISGVIIVTDSASSRSQASVRKWAAEVAAKGRFVAP 136
Query: 142 L----ASGGPGGLPVPYVVIGNKADVAAKEGTRG------SSGNLVDAARQWVE------ 185
+ A+ PG LPVP +VI NKAD+ RG S G LV W+E
Sbjct: 137 MPPDQAAANPGSLPVPCLVINNKADLRGMGMRRGVWLSGWSRGFLV-----WLETIMRQF 191
Query: 186 ------KQGLLPSS------EELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRR 233
K L P+S E L +T + A+A + D+ AV FF I RR
Sbjct: 192 KFRRKLKTLLRPASSSGLSDERLAVTV-------ISASAAQGIIDEAAVDGFFAECIARR 244
>gi|383847088|ref|XP_003699187.1| PREDICTED: rab-like protein 3-like [Megachile rotundata]
Length = 231
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 115/222 (51%), Gaps = 29/222 (13%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+++VVGDSGVGKTSL++LI + S PS TIGC+V VK Y + +
Sbjct: 6 KVKIIVVGDSGVGKTSLIHLICQQQPISNPSWTIGCSVEVKLHEYKQGTPN--------Q 57
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIAT--SGTF 138
R +F+ELWDI G + +K+ RS+ Y+ NG+I VHDL+ R+++ +LQKW E+ + S
Sbjct: 58 RRYFIELWDIGGSQNHKNTRSVFYNPTNGIILVHDLTNRKSQQNLQKWLEEVLSKDSNMK 117
Query: 139 SAPLASGGP----GGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
S P P G +P +V+G K D+ A+ N+ + E+ G
Sbjct: 118 SKPFDDFDPEKFVGSTQIPILVVGTKLDLVAE-----VRSNVHRRSSTIAEECGADEIFL 172
Query: 195 ELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFS 236
+ S G ++ K +R FF +I RRY+S
Sbjct: 173 DCRQVRSLAAGSS--SSVKLSR--------FFDKVIERRYYS 204
>gi|322784965|gb|EFZ11736.1| hypothetical protein SINV_10594 [Solenopsis invicta]
Length = 233
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 116/225 (51%), Gaps = 33/225 (14%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+++VVGDSGVGKTSL +LI + PS TIGC+V VK Y + +
Sbjct: 6 KVKIIVVGDSGVGKTSLTHLICQQLPIGNPSWTIGCSVEVKLHEYKEGTPN--------Q 57
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEI-ATSGTFS 139
R +FVELWD+ G + +K+ RS+ Y+ NG+I VHDL+ R+++ +LQKW E+ + GTFS
Sbjct: 58 RRYFVELWDVGGSQSHKNTRSVFYNPTNGIILVHDLTNRKSQQNLQKWLEEVLSKDGTFS 117
Query: 140 APLA------SGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSS 193
+ G +P +VIG K D+ S N V + R+ +
Sbjct: 118 KSKSFDDFDPEKFVGSTQIPILVIGTKLDLI-------SESNFVKSNRRSA------TIA 164
Query: 194 EELPLTESFPGGGGL--IAAAKEARYDKEAVMKFFRMLIRRRYFS 236
EE E F + +AA + + +FF +I RRY+S
Sbjct: 165 EECGADEIFLDCRQIRSLAAGSSSSV---KLSRFFDKVIERRYYS 206
>gi|340720122|ref|XP_003398492.1| PREDICTED: LOW QUALITY PROTEIN: rab-like protein 3-like [Bombus
terrestris]
gi|350408273|ref|XP_003488357.1| PREDICTED: rab-like protein 3-like [Bombus impatiens]
Length = 232
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 112/223 (50%), Gaps = 30/223 (13%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+++VVGDSGVGKTSL +LI + PS TIGC+V VK Y + +
Sbjct: 6 KVKIIVVGDSGVGKTSLTHLICQQQPIRNPSWTIGCSVEVKLHEYKEGTPN--------Q 57
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTF-- 138
R +F+ELWDI G + +K+ RS+ Y+ NG+I VHDL+ R+++ +LQKW E+ +
Sbjct: 58 RRYFIELWDIGGSQSHKNTRSVFYNPTNGIILVHDLTNRKSQQNLQKWLEEVLSKDNNYM 117
Query: 139 -SAPLASGGP----GGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSS 193
S P P G +P +VIG K D+ A+ N+ + E+ G
Sbjct: 118 KSKPFDDFDPEKFVGSTQIPILVIGTKLDLVAE-----VRSNVHRRSSTIAEECGADEIF 172
Query: 194 EELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFS 236
+ S G ++ K +R FF +I RRY+S
Sbjct: 173 LDCHQVRSLAAGSS--SSVKLSR--------FFDKVIERRYYS 205
>gi|405953455|gb|EKC21114.1| Rab-like protein 3 [Crassostrea gigas]
Length = 225
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 94/152 (61%), Gaps = 19/152 (12%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITY--GSSGSSSNSIKGD 78
+V+++VVGDSGVGKTSLV+LI + + P TIGC+V VK Y G+ G
Sbjct: 7 KVKIVVVGDSGVGKTSLVHLICHQAPTTNPPYTIGCSVEVKLHDYKAGTPG--------- 57
Query: 79 SERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTF 138
E+ FFVELWDI G +++ RSI Y+ ++G++ VHDLS R++ +L+KW E+ G+
Sbjct: 58 -EKTFFVELWDIGGSTSHQNSRSIFYNSVHGIMLVHDLSNRKSHQNLRKWLGEVINRGS- 115
Query: 139 SAPLASGGP------GGLPVPYVVIGNKADVA 164
+ A+GG G+ +P +V+G KAD A
Sbjct: 116 TKDNANGGDYDQELFAGIQIPIMVVGCKADQA 147
>gi|66517499|ref|XP_624424.1| PREDICTED: rab-like protein 3-like [Apis mellifera]
Length = 231
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 116/225 (51%), Gaps = 34/225 (15%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+++V+GDSGVGKTSL +LI + S PS TIGC+V VK Y + +
Sbjct: 6 KVKIIVLGDSGVGKTSLTHLICQQQPISNPSWTIGCSVEVKLHEYKEGTPN--------Q 57
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIAT------ 134
R +F+ELWDI G + +K+ RS+ Y+ NG+I VHDL+ R+++ +LQKW E+ +
Sbjct: 58 RRYFIELWDIGGSQNHKNTRSVFYNPTNGIILVHDLTNRKSQQNLQKWLEEVLSKDSNYM 117
Query: 135 -SGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSS 193
S +F G +P +VIG K D+ A+ R V+++ +
Sbjct: 118 KSKSFDDFDPEKFVGSTQIPILVIGTKLDLIAE-------------VRTSVQRRS-STIA 163
Query: 194 EELPLTESFPGGGGL--IAAAKEARYDKEAVMKFFRMLIRRRYFS 236
EE E F + +AA + + +FF +I RRY+S
Sbjct: 164 EECGADEIFLDCHQVRSLAAGSSSSV---KLSRFFDKVIERRYYS 205
>gi|303274681|ref|XP_003056656.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461008|gb|EEH58301.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 417
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 101/180 (56%), Gaps = 42/180 (23%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKG------SSFSR---------PSQTIGCTVGVKHITY 65
+VRV VVGD+G GK+SLV L+++ +S+S P +TIGC V+ + +
Sbjct: 46 KVRVAVVGDTGCGKSSLVRLMLESGEPGATTSYSTTRRRGGSRLPDRTIGCEAEVRVLHH 105
Query: 66 GSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSL 125
G+S +S + R FVE++DI GH+ YK RS+ Y +++GV+ VHDLS R + L
Sbjct: 106 PPPGASGDS----TPRPHFVEIFDIGGHDEYKGERSVFYDELDGVVLVHDLSFRGSAKKL 161
Query: 126 QKWAVEIATSGTFSAPLAS----------------------GGPGGLPVPYVVIGNKADV 163
++WA EIA +GTF AP AS G GGLPVP +V+ NKAD+
Sbjct: 162 ERWAREIAATGTF-APAASTPQWNAAPGTPLAMPPSSSNVLHGFGGLPVPALVVANKADL 220
>gi|380027234|ref|XP_003697334.1| PREDICTED: rab-like protein 3-like [Apis florea]
Length = 231
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 34/225 (15%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+++V+GDSGVGKTSL +LI + + PS TIGC+V VK Y + +
Sbjct: 6 KVKIIVLGDSGVGKTSLTHLICQQQPINNPSWTIGCSVEVKLHEYKEGTPN--------Q 57
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIAT------ 134
R +F+ELWDI G + +K+ RS+ Y+ NG+I VHDL+ R+++ +LQKW E+ +
Sbjct: 58 RRYFIELWDIGGSQNHKNTRSVFYNPTNGIILVHDLTNRKSQQNLQKWLEEVLSKDSNYM 117
Query: 135 -SGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSS 193
S +F G +P +VIG K D+ A+ R V+++ +
Sbjct: 118 KSKSFDDFDPEKFVGSTQIPILVIGTKLDLVAE-------------VRTSVQRRS-STIA 163
Query: 194 EELPLTESFPGGGGL--IAAAKEARYDKEAVMKFFRMLIRRRYFS 236
EE E F + +AA + + +FF +I RRY+S
Sbjct: 164 EECGADEIFLDCHQVRSLAAGSSSSV---KLSRFFDKVIERRYYS 205
>gi|321459253|gb|EFX70308.1| hypothetical protein DAPPUDRAFT_300514 [Daphnia pulex]
Length = 248
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 122/240 (50%), Gaps = 41/240 (17%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+VR++V+GDSGVGKTSL++ + G P+ TIGC+V VK Y S+ +
Sbjct: 8 KVRIIVIGDSGVGKTSLIHTLCHGEPIINPTWTIGCSVDVKLHEYREGTSA--------Q 59
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIAT---SGT 137
+ FFVELWD+ G +K+ RS+ Y+ +G+I VHDL+ R+++ +L+KW E+ T +G
Sbjct: 60 KTFFVELWDVGGSSGHKNTRSVFYTPAHGIILVHDLTNRKSEGNLRKWLAEVLTKECNGN 119
Query: 138 FSAPLASGGP---------------GGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQ 182
+ + + P G +P +V+G K D+A + T +
Sbjct: 120 TLSSVRTVNPSRNQDIDEYDPEQFIGSSQIPILVVGTKLDLAEEVRTHFN---------- 169
Query: 183 WVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAP 242
+ L P +EE E F A A + + + +FF ++I +R+++ + P+P
Sbjct: 170 ----RRLSPIAEECGAGEIFVDCTTAKAMAPGSSSSVK-LSRFFDLVIEKRFYNRDRPSP 224
>gi|307215378|gb|EFN90063.1| Rab-like protein 3 [Harpegnathos saltator]
Length = 232
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 89/150 (59%), Gaps = 15/150 (10%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+++VVGDSGVGKTSL +LI + S PS T+GC+V VK Y + +
Sbjct: 6 KVKIIVVGDSGVGKTSLTHLICQQQPISNPSWTVGCSVEVKLHEYREGTPN--------Q 57
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIAT-SGTFS 139
R +F+ELWD+ G + +K+ RS+ Y+ NG+I VHDL+ R+++ +LQKW E+ GTFS
Sbjct: 58 RRYFIELWDVGGSQNHKNTRSVFYNPTNGIILVHDLTNRKSQQNLQKWLEEVLNKDGTFS 117
Query: 140 APLA------SGGPGGLPVPYVVIGNKADV 163
+ G +P +VIG K D+
Sbjct: 118 KSKSFDDFDPEKFVGLTHIPILVIGTKLDL 147
>gi|332017144|gb|EGI57943.1| Rab-like protein 3 [Acromyrmex echinatior]
Length = 234
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 114/222 (51%), Gaps = 26/222 (11%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+++VVGDSGVGKTSL +LI + P+ TIGC+V VK Y + +
Sbjct: 6 KVKIIVVGDSGVGKTSLTHLICQQQPIGNPAWTIGCSVEVKLHEYKEGTPN--------Q 57
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEI-ATSGTFS 139
R +FVELWD+ G + +K+ RS+ Y+ NG+I VHDL+ R+++ +LQKW E+ + GT S
Sbjct: 58 RRYFVELWDVGGSQSHKNIRSVFYNPTNGIILVHDLTNRKSQQNLQKWLEEVLSKDGTSS 117
Query: 140 -APLASGGP----GGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
+ P G +P +VIG K D+ + S N+ + E+ G
Sbjct: 118 KSKFEDFDPEKFVGSTQIPILVIGTKFDLISDSNFVKS--NIHRRSATIAEECGADEIFL 175
Query: 195 ELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFS 236
+ S G ++ K +R FF +I RRY+S
Sbjct: 176 DCHQIRSLAAGSS--SSVKLSR--------FFDKVIERRYYS 207
>gi|307178157|gb|EFN66965.1| Rab-like protein 3 [Camponotus floridanus]
Length = 235
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 113/223 (50%), Gaps = 27/223 (12%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+++V+GDSGVGKTSL +LI + PS T+GC++ VK Y + +
Sbjct: 6 KVKIIVIGDSGVGKTSLTHLICQQQPIGNPSWTVGCSIEVKLHEYKEGTPN--------Q 57
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEI-------A 133
R +F+ELWDI G + +K+ RS+ Y+ NG+I VHDL+ R+++ +LQKW E+ +
Sbjct: 58 RRYFIELWDIGGSQNHKNTRSVFYNPTNGIILVHDLTNRKSQQNLQKWLEEVLSKDGTSS 117
Query: 134 TSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSS 193
S +F G +P +V+G K D+ ++ S N+ + E+ G
Sbjct: 118 KSKSFEDFDPEKFVGSTQIPILVVGTKFDLISESNFIKS--NVHRRSATIAEECGADEIF 175
Query: 194 EELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFS 236
+ S G ++ K +R FF +I +RY+S
Sbjct: 176 LDCRQIRSLAAGSS--SSVKLSR--------FFDKVIEKRYYS 208
>gi|156546462|ref|XP_001607315.1| PREDICTED: rab-like protein 3-like [Nasonia vitripennis]
Length = 232
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 111/229 (48%), Gaps = 42/229 (18%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+++VVGDSGVGK+SL +LI + + PS TIGC+V VK Y + +
Sbjct: 6 KVKIIVVGDSGVGKSSLTHLICQQQPINNPSWTIGCSVEVKLHEYKEGTPN--------Q 57
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGT--- 137
R +F+ELWD+ G + +K+ R + YS NG+I VHDL+ R+++ +LQKW E+ +
Sbjct: 58 RRYFIELWDVGGSQSHKNTRHVFYSPTNGIILVHDLTNRKSQQNLQKWLEEVLSKDNSHF 117
Query: 138 ----FSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSS 193
F G +P +VIG K+D LV R + ++ +
Sbjct: 118 KPKQFDDFDPEKFVGSTQIPILVIGTKSD-------------LVSEVRSSIHRRSSTIAE 164
Query: 194 EE------LPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFS 236
E L ++ G ++ K +R FF +I RRY++
Sbjct: 165 ECGADEIFLDCRQTRSLAAGTSSSVKLSR--------FFDKVIERRYYA 205
>gi|357613510|gb|EHJ68552.1| hypothetical protein KGM_03860 [Danaus plexippus]
Length = 242
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 110/227 (48%), Gaps = 29/227 (12%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+V+V+GDSGVGKTSL L+ P T+GC+V VK Y + N+
Sbjct: 6 KVKVVVLGDSGVGKTSLTYLVAHNKPLLSPGWTVGCSVEVKLHKYKEGTQAQNT------ 59
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATS-GTF- 138
FFVELWD+ G +++ R++ Y +G+I VHDL+ R+++ +LQKW EI GT
Sbjct: 60 --FFVELWDVGGSNNHRNTRNVFYQPTHGIILVHDLTNRKSQLNLQKWLSEILNQDGTNP 117
Query: 139 SAPLASGGP----GGLPVPYVVIGNKADVAAKEGTRGSSGNLVDA-ARQWVEKQGLLPSS 193
+ P G +P +VIG K D+A ++ + L + A Q + +
Sbjct: 118 NYQHVDVDPEQFLGSTQIPILVIGTKYDLAEEKQRKNQYRRLASSIAEQCGADEIFVTCH 177
Query: 194 EELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMP 240
+ L PG + + +FF +I RRY++ + P
Sbjct: 178 QARSLA---PGTSNSV-----------KLTRFFDKVIERRYYATQFP 210
>gi|157131735|ref|XP_001662312.1| small GTPase, putative [Aedes aegypti]
gi|108871423|gb|EAT35648.1| AAEL012195-PB [Aedes aegypti]
Length = 226
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 109/244 (44%), Gaps = 40/244 (16%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+VRVLVVGDSGVGKTSL +LI + P T+GC V VK Y S N+
Sbjct: 6 KVRVLVVGDSGVGKTSLTHLIANNEPLTSPGWTVGCAVEVKLHEYKEGTPSQNT------ 59
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATS----- 135
FF+ELWD+ G + + R + Y+ +G+I VHDL+ +++ +LQ+W +EI
Sbjct: 60 --FFIELWDVGGSISHMNTRGVFYNPTHGIILVHDLTNKKSHDNLQRWLIEILNKDGKDA 117
Query: 136 ---GTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPS 192
G F G +P +VIG K D+ + K +L
Sbjct: 118 LKGGDFLDIDPEQFLGSTQIPILVIGTKLDMLDEH-----------------HKNKILNK 160
Query: 193 SEELPLTESFPGGGGLIAAAKEAR------YDKEAVMKFFRMLIRRRYFSDEMPAPNPWS 246
+ + E G + EAR D + +FF +I R+Y+S + S
Sbjct: 161 TSAGSIAEQ-CGADEICLNCHEARSLAAGTTDSVKLSRFFDKVIERKYYSRDTSRKYAGS 219
Query: 247 ISPT 250
+P+
Sbjct: 220 YNPS 223
>gi|158295718|ref|XP_316374.4| AGAP006354-PA [Anopheles gambiae str. PEST]
gi|157016171|gb|EAA10808.4| AGAP006354-PA [Anopheles gambiae str. PEST]
Length = 263
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 111/235 (47%), Gaps = 49/235 (20%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+VRVLVVGDSGVGKTSL +LI + P T+GC+V VK Y + N+
Sbjct: 6 KVRVLVVGDSGVGKTSLTHLIANNEPLTSPGWTVGCSVEVKLHEYREGTPAQNT------ 59
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
FFVELWD+ G +K+ R + Y+ +G+I VHDL+ R+++ +LQ+W EI A
Sbjct: 60 --FFVELWDVGGSISHKNTRGVFYNPTHGIILVHDLTNRKSQENLQRWLAEILNKDGKDA 117
Query: 141 PLASGGPGGL--------------PVPYVVIGNKADV-----AAKEGTRGSSGNLVDAAR 181
L G + +P +VIG K D+ K TR S+G++ +
Sbjct: 118 -LKGGDAIDMDPEQFLGSTQFKLSQIPILVIGTKLDMLDEGHKQKIQTRTSAGSIAEQC- 175
Query: 182 QWVEKQGLLPSSEELPLT--ESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRY 234
++E+ L ES G A K AR FF +I R+Y
Sbjct: 176 ----------GADEICLNCHESRSLAAGTTDAVKLAR--------FFDKVIERKY 212
>gi|255088645|ref|XP_002506245.1| predicted protein [Micromonas sp. RCC299]
gi|226521516|gb|ACO67503.1| predicted protein [Micromonas sp. RCC299]
Length = 397
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 94/183 (51%), Gaps = 42/183 (22%)
Query: 20 GQVRVLVVGDSGVGKTSLVNLI-----------VKGSSFSRPSQTIGCTVGVKHITYGSS 68
G+VRV VVGD+G GKTS V+LI +S +T+GC V +++
Sbjct: 12 GKVRVAVVGDTGSGKTSWVHLIRANGPHGGSRGAGAASVRDQERTMGCKPEVTMVSFDEV 71
Query: 69 GSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKW 128
++ + + R +FVE+WD+ GH +K+ R+ Y+ ++GV+ VHDL++RRT L +W
Sbjct: 72 RTTGGA---NPSRPYFVEMWDVGGHHEWKNLRAAFYADLDGVVLVHDLTRRRTLGRLARW 128
Query: 129 AVEIATSGTFSAPLASG----------------------------GPGGLPVPYVVIGNK 160
A EIA S +F++ +G G GLPVP + +GNK
Sbjct: 129 AREIAASASFASQTPAGSETDARDAMVAAVGGKLLGDALDGCVVHGFCGLPVPALFVGNK 188
Query: 161 ADV 163
AD+
Sbjct: 189 ADI 191
>gi|156402505|ref|XP_001639631.1| predicted protein [Nematostella vectensis]
gi|156226760|gb|EDO47568.1| predicted protein [Nematostella vectensis]
Length = 244
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 115/240 (47%), Gaps = 52/240 (21%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITY--GSSGSSSNSIKGD 78
+VR+ VVGDSGVGKTSLV+LI S S + TIGCTV VK Y G G
Sbjct: 6 KVRIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEGMPGG-------- 57
Query: 79 SERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATS--- 135
+ FF+E WDI G +++ RSI Y+ ING+I VHDL+ R++ T+L+KW E+ +
Sbjct: 58 --KTFFLEFWDIGGSANHENSRSIFYNGINGLILVHDLTNRKSFTNLRKWLAEVLNASKD 115
Query: 136 -------------GTFSAPLASGGP---GGLPVPYVVIGNKADVAAKEGTRGSSGNLVDA 179
G + + P G +P +V+G K D A L
Sbjct: 116 LYGANNKQKDSWFGFTTDIIEEYDPEQFAGNQIPVIVVGTKLDQA-------RPSRLTST 168
Query: 180 AR--QWVEKQGL-LPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFS 236
AR +VE+ G + S + + + + PG + + ++ FF +I RR+ S
Sbjct: 169 ARGMNFVEEIGADVISIDCMNVKQLRPGTA-----------NSKKLINFFDKVIERRFHS 217
>gi|157131733|ref|XP_001662311.1| small GTPase, putative [Aedes aegypti]
gi|108871422|gb|EAT35647.1| AAEL012195-PA [Aedes aegypti]
Length = 231
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 110/249 (44%), Gaps = 45/249 (18%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+VRVLVVGDSGVGKTSL +LI + P T+GC V VK Y S N+
Sbjct: 6 KVRVLVVGDSGVGKTSLTHLIANNEPLTSPGWTVGCAVEVKLHEYKEGTPSQNT------ 59
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATS----- 135
FF+ELWD+ G + + R + Y+ +G+I VHDL+ +++ +LQ+W +EI
Sbjct: 60 --FFIELWDVGGSISHMNTRGVFYNPTHGIILVHDLTNKKSHDNLQRWLIEILNKDGKDA 117
Query: 136 ---GTF-----SAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQ 187
G F L S +P +VIG K D+ + K
Sbjct: 118 LKGGDFLDIDPEQFLGSTQFKNSQIPILVIGTKLDMLDEH-----------------HKN 160
Query: 188 GLLPSSEELPLTESFPGGGGLIAAAKEAR------YDKEAVMKFFRMLIRRRYFSDEMPA 241
+L + + E G + EAR D + +FF +I R+Y+S +
Sbjct: 161 KILNKTSAGSIAEQ-CGADEICLNCHEARSLAAGTTDSVKLSRFFDKVIERKYYSRDTSR 219
Query: 242 PNPWSISPT 250
S +P+
Sbjct: 220 KYAGSYNPS 228
>gi|156340299|ref|XP_001620411.1| hypothetical protein NEMVEDRAFT_v1g8386 [Nematostella vectensis]
gi|156205297|gb|EDO28311.1| predicted protein [Nematostella vectensis]
Length = 111
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 72/114 (63%), Gaps = 12/114 (10%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITY--GSSGSSSNSIKGD 78
+VR+ VVGDSGVGKTSLV+LI S S + TIGCTV VK Y G G
Sbjct: 6 KVRIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEGMPGG-------- 57
Query: 79 SERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEI 132
+ FF+E WDI G +++ RSI Y+ ING+I VHDL+ R++ T+L+KW E+
Sbjct: 58 --KTFFLEFWDIGGSANHENSRSIFYNGINGLILVHDLTNRKSFTNLRKWLAEV 109
>gi|328713337|ref|XP_001948598.2| PREDICTED: rab-like protein 3-like [Acyrthosiphon pisum]
Length = 277
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 85/162 (52%), Gaps = 16/162 (9%)
Query: 19 TGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGD 78
T V+VLVVGDSGVGKT LVNL+ P T+G TV +K Y ++G
Sbjct: 37 TDSVKVLVVGDSGVGKTCLVNLMSNNKVVKNPKWTVGVTVEIKLYKY---------MEGT 87
Query: 79 -SERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGT 137
+R+ F+E+WDI G +K+ R I Y+ I+G+I V+DL+ ++ +L KW EI
Sbjct: 88 PRQRNCFIEMWDIGGSSNHKNTRDIFYNAIHGIILVYDLTNLKSSENLHKWLAEILNKDN 147
Query: 138 FSAPLASGG------PGGLPVPYVVIGNKADVAAKEGTRGSS 173
S + G G VP +V G K D+A + G + S
Sbjct: 148 NSKYKCTDGFDMEQLVGSNRVPILVCGTKLDMAPERGKKSPS 189
>gi|189237653|ref|XP_001811993.1| PREDICTED: similar to small GTPase, putative [Tribolium castaneum]
gi|270006864|gb|EFA03312.1| hypothetical protein TcasGA2_TC013254 [Tribolium castaneum]
Length = 232
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 19/163 (11%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+VR++V+GDSGVGKTS V+L+ PS T+GC+V VK Y +
Sbjct: 6 RVRIMVLGDSGVGKTSFVHLVAHNEPIRSPSWTVGCSVEVKLHEYKEGTKD--------Q 57
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
+ +F+E WD+ G +++ R + Y+ +GVI VHDL+ R+++ +L KW E+
Sbjct: 58 KTYFIEFWDVGGSNNHRNTRPVFYNPCHGVILVHDLTNRKSELNLHKWLQELINHDVNQT 117
Query: 141 PLASGGP----------GGLPVPYVVIGNKAD-VAAKEGTRGS 172
L S G P+P +VIG K D + ++ T G+
Sbjct: 118 SLTSISSMDEYDPENFFGNTPMPILVIGTKLDQIDERKSTTGT 160
>gi|443698444|gb|ELT98421.1| hypothetical protein CAPTEDRAFT_224674 [Capitella teleta]
Length = 236
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 84/151 (55%), Gaps = 17/151 (11%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+VRVLVVGDSGVGKTSLV+L+ P+ TIG + VK Y + + +
Sbjct: 7 KVRVLVVGDSGVGKTSLVHLVCHNEPIRNPNWTIGSSAEVKLHEYRAGTPA--------Q 58
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
+ FFVELWD+ G +++ RSI Y+ +G+I VHD + R+++ +L+KW E+ +
Sbjct: 59 KTFFVELWDVGGWSAHQNSRSIFYTPTHGIILVHDSTNRKSQQNLRKWLAEVLNKDSNDK 118
Query: 141 -------PLASGGPGGLPVPYVVIGNKADVA 164
P G LP+ +VIG K D+A
Sbjct: 119 NEEFDYDPEQYAGASTLPI--LVIGTKIDLA 147
>gi|440792836|gb|ELR14044.1| Ras subfamily protein [Acanthamoeba castellanii str. Neff]
Length = 286
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 32/166 (19%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
Q+RVLVVGDSG+GKT L +L+ KG S TIGC+ VK + KG
Sbjct: 18 QIRVLVVGDSGIGKTVLSHLVCKGEVLPNSSYTIGCSTEVK----------IHEFKG--- 64
Query: 81 RDFFVELWDISGHERYKDCRSILYSQ--INGVIFVHDLSQRRTKTSLQKWAVEIATSGTF 138
R +++E WD+ G ++Y + R ++++ ING+I VHDL+ R++ ++ W ++ S +F
Sbjct: 65 RPYYIEFWDLGGSKKYAESRGVVFNHLSINGLILVHDLTNRKSYKNIGLWIKQVIGSDSF 124
Query: 139 SAPL-ASGGPGGL----------------PVPYVVIGNKADVAAKE 167
+ G GG P+P +++G AD+AA+E
Sbjct: 125 KWKVEVDDGEGGFATHKDRHTLELDTYNGPLPVLIVGTMADLAARE 170
>gi|412990858|emb|CCO18230.1| predicted protein [Bathycoccus prasinos]
Length = 367
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 92/203 (45%), Gaps = 74/203 (36%)
Query: 20 GQVRVLVVGDSGVGKTSL------------------------------------------ 37
G+VRVLV G++G GKT+L
Sbjct: 8 GKVRVLVCGNAGSGKTTLLRHVRDEVDVSTTIQTTVQTTTSTTSKTTSKSTSENKKNETK 67
Query: 38 -VNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERDFFVELWDISGHERY 96
+NL+V+ +TIGC+ VK I + + + + FVELWD+ GH+++
Sbjct: 68 MLNLLVENV-----ERTIGCSADVKLIFHEHART-----------EHFVELWDVGGHDQF 111
Query: 97 KDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPLASG----------- 145
KD R+ + IN VI VHD SQ+ + +L++WA EIA GTF AP
Sbjct: 112 KDDRAAFFRDINAVILVHDASQKNSALTLERWAREIAQQGTFVAPDTHTPNPWVTSTRDP 171
Query: 146 ----GPGGLPVPYVVIGNKADVA 164
G GGLPVP +VI NK+D A
Sbjct: 172 HVIYGFGGLPVPCLVISNKSDKA 194
>gi|226482510|emb|CAX73854.1| RAB, member of RAS oncogene family-like 3 [Schistosoma japonicum]
Length = 417
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 86/156 (55%), Gaps = 17/156 (10%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+ +V+V GDSGVGKT+LV+LI + PS TIGC+V +K Y ++ S+ E
Sbjct: 5 RAKVIVGGDSGVGKTALVHLICNQQTLLHPSYTIGCSVDIKVHLYNNNDSTK-------E 57
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTF-- 138
+F+ELWDI G +++ RSI Y ++G+I V+D + ++++ +L+KW +I
Sbjct: 58 HPYFIELWDIGGSNSHENTRSIFYQNLHGLILVYDCTNKKSQLNLRKWLCDILGKQVLKK 117
Query: 139 SAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSG 174
S P GG VV G A A T G++G
Sbjct: 118 SEPDIDGG--------VVAGATAVNGATTITTGNNG 145
>gi|289740793|gb|ADD19144.1| GTP-binding protein SEC4 [Glossina morsitans morsitans]
Length = 279
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 107/227 (47%), Gaps = 44/227 (19%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+VR+++VGDSGVGKT +LI +RP T+GC + VK Y G+ +
Sbjct: 7 KVRIILVGDSGVGKTCFTHLIAHNECLNRPGWTVGCNIEVKLHEY-KEGTPHQKL----- 60
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIAT---SGT 137
+F+EL+DI G +K+ R++ Y+ I+G+I VHDL+ R++ +L+ W EI + T
Sbjct: 61 --YFIELFDIGGSLSHKNSRNVFYTAIHGIILVHDLTNRKSHGNLRDWLYEILSKDGKNT 118
Query: 138 FSAPLASGG-------------PGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAAR--Q 182
+ + GG G +P +V+G K D LVD R +
Sbjct: 119 YKSSSMMGGITTESNGFDPEEFIGATQIPILVVGTKLD-------------LVDEKRHPK 165
Query: 183 WVEKQGLLPS---SEELPLTESFPG--GGGLIAAAKEARYDKEAVMK 224
V+K G + +EE+ L P G A K AR+ + K
Sbjct: 166 TVQKAGGIAEQCGAEEIWLNCRDPRSIAAGTTDAVKLARFFDRVIEK 212
>gi|432964668|ref|XP_004086968.1| PREDICTED: rab-like protein 3-like [Oryzias latipes]
Length = 233
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 110/233 (47%), Gaps = 34/233 (14%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRIHDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE-IATS 135
+ F++ELWD+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E +
Sbjct: 58 KTFYIELWDVGGSVGSASSLKSTRAVFYNSVNGIILVHDLTNKKSSQNLYRWSLEALNRD 117
Query: 136 GTFSAPLASGGP------GGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGL 189
+ + + S G PVP ++IG K D E R R +
Sbjct: 118 SSPTGVIVSNGDYDREQFAENPVPLLLIGTKFD-QIPESKRSEV-----LTRTAFLSEDF 171
Query: 190 LPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAP 242
+ L T G A K +R FF +I +RYF+ + P+P
Sbjct: 172 IAEEINLDCTNPRYLAAGTSNAVKLSR--------FFDKVIEKRYFTRD-PSP 215
>gi|226482508|emb|CAX73853.1| RAB, member of RAS oncogene family-like 3 [Schistosoma japonicum]
Length = 417
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 86/156 (55%), Gaps = 17/156 (10%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+ +V+V GDSGVGKT+LV+LI + PS TIGC+V +K Y ++ S+ E
Sbjct: 5 RAKVIVGGDSGVGKTALVHLICNQQTLLHPSYTIGCSVDIKVHLYNNNDSTK-------E 57
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTF-- 138
+F+ELWDI G +++ RSI Y ++G+I V+D + ++++ +L+KW +I
Sbjct: 58 HPYFIELWDIGGSNSHENTRSIFYQNLHGLILVYDCTNKKSQLNLRKWLCDILGKQVLKK 117
Query: 139 SAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSG 174
S P GG VV G A A + G++G
Sbjct: 118 SEPDIDGG--------VVAGATAVSGATTISTGNNG 145
>gi|340383141|ref|XP_003390076.1| PREDICTED: rab-like protein 3-like [Amphimedon queenslandica]
Length = 281
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 90/174 (51%), Gaps = 24/174 (13%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V++LV+GDSGVGK+SLV++I +G + P T+GC V VK Y S SSS
Sbjct: 7 KVKILVLGDSGVGKSSLVHVITEGEVLANPVSTVGCVVDVKLHEYSRSMSSSPV------ 60
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFS- 139
FFVE WD+ G ++ R I Y Q NGVI VHD + R++ +L KW E T
Sbjct: 61 -SFFVEFWDVGGSMSHEKGRGIFYQQANGVILVHDSTNRKSHNNLSKWLTEYHRYKTGRT 119
Query: 140 ---APLASGGPGGLP-------VPYVVIGNKADVAAKEGTRG----SSGNLVDA 179
AP + G P VP +++G K D + G R SGNL+ A
Sbjct: 120 DSLAPQDTNESGFDPEKFIEQEVPLLIVGTKEDQVS--GRRSPPTQRSGNLLGA 171
>gi|332374886|gb|AEE62584.1| unknown [Dendroctonus ponderosae]
Length = 239
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 68/118 (57%), Gaps = 8/118 (6%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+++V+V+GDSGVGKTS V+L PS T+GCTV VK + +
Sbjct: 6 RIKVMVLGDSGVGKTSFVHLAAHNEPIKSPSWTVGCTVEVKLHEFKEGTKD--------Q 57
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTF 138
+ +FVE WD+ G + +++ R + Y NG I VHDL+ R ++ +LQKW E+ G+F
Sbjct: 58 KTYFVEFWDVGGSKNHENSRPVFYHPCNGAILVHDLTNRNSEKNLQKWLKELLIHGSF 115
>gi|291228970|ref|XP_002734449.1| PREDICTED: small GTPase, putative-like [Saccoglossus kowalevskii]
Length = 258
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 107/232 (46%), Gaps = 45/232 (19%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+VR+LVVGDSGVGK+SLV+L+ + S TIG V VK Y S +
Sbjct: 8 KVRILVVGDSGVGKSSLVHLVCHSEPIANASWTIGAAVDVKVHEYKEGTPS--------Q 59
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
+ +F+E WD+ G + R I ++ ++G+I VHDL+ R++ +L+KW E+ + A
Sbjct: 60 KTYFLEFWDVGGSANHTKSRHIFFNPVHGLILVHDLTNRKSHLNLRKWLAEVLAKDSNGA 119
Query: 141 PLASGGP--------GGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPS 192
+ S G +P +V+G K D +D R+ V + P
Sbjct: 120 KIGSNSGSEYDPERFAGSHIPILVVGTKMD-------------QIDPRRESVLSRS-SPV 165
Query: 193 SEE-------LPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSD 237
+EE L +S G A K +R FF +IRR+++ +
Sbjct: 166 AEECGADEINLDCMQSKDLAAGTSKAVKFSR--------FFDKVIRRQFYCN 209
>gi|62751417|ref|NP_776186.2| rab-like protein 3 [Homo sapiens]
gi|114588736|ref|XP_516675.2| PREDICTED: RAB, member of RAS oncogene family-like 3 [Pan
troglodytes]
gi|397509618|ref|XP_003825214.1| PREDICTED: rab-like protein 3 [Pan paniscus]
gi|426341759|ref|XP_004036193.1| PREDICTED: rab-like protein 3 [Gorilla gorilla gorilla]
gi|74762186|sp|Q5HYI8.1|RABL3_HUMAN RecName: Full=Rab-like protein 3
gi|57997493|emb|CAI46095.1| hypothetical protein [Homo sapiens]
gi|57997509|emb|CAI46064.1| hypothetical protein [Homo sapiens]
gi|57997520|emb|CAI46059.1| hypothetical protein [Homo sapiens]
gi|119599927|gb|EAW79521.1| RAB, member of RAS oncogene family-like 3, isoform CRA_b [Homo
sapiens]
gi|158259631|dbj|BAF85774.1| unnamed protein product [Homo sapiens]
gi|208967228|dbj|BAG73628.1| RAB, member of RAS oncogene family-like 3 [synthetic construct]
gi|410211286|gb|JAA02862.1| RAB, member of RAS oncogene family-like 3 [Pan troglodytes]
gi|410250064|gb|JAA12999.1| RAB, member of RAS oncogene family-like 3 [Pan troglodytes]
gi|410290534|gb|JAA23867.1| RAB, member of RAS oncogene family-like 3 [Pan troglodytes]
gi|410330411|gb|JAA34152.1| RAB, member of RAS oncogene family-like 3 [Pan troglodytes]
Length = 236
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 107/233 (45%), Gaps = 41/233 (17%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE----- 131
+ +++ELWD+ G K R++ Y+ +NG+IFVHDL+ +++ +L++W++E
Sbjct: 58 KTYYIELWDVGGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRWSLEALNRD 117
Query: 132 ------IATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVE 185
+ T+G + + +P +VIG K D E R R
Sbjct: 118 LVPTGVLVTNGDYDQEQFADN----QIPLLVIGTKLD-QIHETKRHEV-----LTRTAFL 167
Query: 186 KQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDE 238
+ P L T G A K +R FF +I +RYF E
Sbjct: 168 AEDFNPEEINLDCTNPRYLAAGSSNAVKLSR--------FFDKVIEKRYFLRE 212
>gi|196014245|ref|XP_002116982.1| hypothetical protein TRIADDRAFT_60948 [Trichoplax adhaerens]
gi|190580473|gb|EDV20556.1| hypothetical protein TRIADDRAFT_60948 [Trichoplax adhaerens]
Length = 232
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 89/167 (53%), Gaps = 21/167 (12%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+VR+LV+GDSGVGKT+L++L+ S P TIGC++ VK YG + +
Sbjct: 5 KVRILVLGDSGVGKTTLIHLLCHQEFLSNPYWTIGCSIHVKVHEYGDNRHGN-------- 56
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIA---TSGT 137
+ +F+EL+D+ G + R I Y+ I+G+I VHDLS R++ +L+KW E S
Sbjct: 57 KPYFLELFDVGGSSSHAASRGIFYNVIHGIILVHDLSNRKSLMNLRKWLQEALGSRESAG 116
Query: 138 FSAPLASG--------GPGGLPVPYVVIGNKADVAA--KEGTRGSSG 174
+P+ G G VP +++G K + A KE +R G
Sbjct: 117 MKSPIKEGPKEYDPEQFAGTSNVPILLVGTKLNQVASNKEMSRSKPG 163
>gi|348511587|ref|XP_003443325.1| PREDICTED: rab-like protein 3-like [Oreochromis niloticus]
Length = 233
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 113/232 (48%), Gaps = 43/232 (18%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVQDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE-IATS 135
+ F++ELWD+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E +
Sbjct: 58 KTFYIELWDVGGSVGSASSVKSTRAVFYNSVNGIILVHDLTNKKSSQNLYRWSLEALNKD 117
Query: 136 GTFSAPLASGGP------GGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGL 189
+ + + S G PVP ++IG K D E R + + +
Sbjct: 118 SSPTGVIVSNGDYDREQFAENPVPLLLIGTKFD-QIPENKRS----------EVLTRTAF 166
Query: 190 LP---SSEELPLTESFPG--GGGLIAAAKEARYDKEAVMKFFRMLIRRRYFS 236
L ++EE+ L + P G A K +R FF +I +RYF+
Sbjct: 167 LSEDFNAEEINLDCTNPRYLAAGTSNAVKLSR--------FFDKVIEKRYFT 210
>gi|302565718|ref|NP_001181436.1| rab-like protein 3 [Macaca mulatta]
gi|297670251|ref|XP_002813287.1| PREDICTED: rab-like protein 3 [Pongo abelii]
gi|402859152|ref|XP_003894033.1| PREDICTED: rab-like protein 3 [Papio anubis]
gi|355559372|gb|EHH16100.1| hypothetical protein EGK_11337 [Macaca mulatta]
gi|355746449|gb|EHH51063.1| hypothetical protein EGM_10387 [Macaca fascicularis]
gi|384946556|gb|AFI36883.1| rab-like protein 3 [Macaca mulatta]
Length = 236
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 107/233 (45%), Gaps = 41/233 (17%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE----- 131
+ +++ELWD+ G K R++ Y+ +NG+IFVHDL+ +++ +L++W++E
Sbjct: 58 KTYYIELWDVGGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRWSLEALNRD 117
Query: 132 ------IATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVE 185
+ T+G + + +P +VIG K D E R R
Sbjct: 118 LVPTGVLVTNGDYDREQFADN----QIPLLVIGTKLD-QIHETKRHEV-----LTRTAFL 167
Query: 186 KQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDE 238
+ P L T G A K +R FF +I +RYF E
Sbjct: 168 AEDFNPEEINLDCTNPRYLAAGSSNAVKLSR--------FFDKVIEKRYFLRE 212
>gi|330796240|ref|XP_003286176.1| LIP1/RABL3-like protein, Ras superfamily GTPase [Dictyostelium
purpureum]
gi|325083846|gb|EGC37288.1| LIP1/RABL3-like protein, Ras superfamily GTPase [Dictyostelium
purpureum]
Length = 560
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 69/113 (61%), Gaps = 14/113 (12%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSR-PSQTIGCTVGVKHITYGSSGSSSNSIKGDS 79
+VRVLV+GD+ VGK+SLV+LI +R PS T+GC VK Y S
Sbjct: 64 KVRVLVIGDTAVGKSSLVHLICNDEILTRSPSWTVGCNTDVKMHEYHS------------ 111
Query: 80 ERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEI 132
+D+++E DI G +YK R ILY QING+I V+DL+ + + T+++KW +I
Sbjct: 112 -KDYYIEFIDIGGSSKYKITRPILYHQINGIIVVYDLTNKISLTNVKKWLFDI 163
>gi|332225508|ref|XP_003261921.1| PREDICTED: rab-like protein 3 [Nomascus leucogenys]
Length = 236
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 107/233 (45%), Gaps = 41/233 (17%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE----- 131
+ +++ELWD+ G K R++ Y+ +NG+IFVHDL+ +++ +L++W++E
Sbjct: 58 KTYYIELWDVGGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRWSLEALNRD 117
Query: 132 ------IATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVE 185
+ T+G + + +P +VIG K D E R R
Sbjct: 118 LVPTGVLVTNGDYDREQFADN----QIPLLVIGTKLD-QIHETKRHEV-----LTRTAFL 167
Query: 186 KQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDE 238
+ P L T G A K +R FF +I +RYF E
Sbjct: 168 AEDFNPEEINLDCTNPRYLAAGSSNAVKLSR--------FFDKVIEKRYFLRE 212
>gi|427796597|gb|JAA63750.1| Putative rab-like protein 3, partial [Rhipicephalus pulchellus]
Length = 239
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 101/218 (46%), Gaps = 34/218 (15%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V++LVVGDSGVGK+S V+L+ + S TIGC V VK Y +S +
Sbjct: 19 KVKILVVGDSGVGKSSAVHLLCHNRPLANASWTIGCNVEVKLHEYREGTAS--------Q 70
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
+ +FVELWDI G + R++ Y+ +G+I VHDL+ +++ +L+KW E+
Sbjct: 71 KTYFVELWDIGGSSSHSSARAVFYNSFHGLILVHDLTNKKSHENLRKWLSEV-----LCK 125
Query: 141 PLASGGPGGL-----------PVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGL 189
S G+ VP +V+ K D+ + R L A + Q L
Sbjct: 126 DCPSKKANGMLEFDQEMFADSQVPILVVATKVDLVPQTAGRA----LATVADECGTDQVL 181
Query: 190 LPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFR 227
L + L+ PG A K R+ + V + FR
Sbjct: 182 LDNHNPKTLS---PGSSN---ALKVTRFLDKVVERRFR 213
>gi|76154903|gb|AAX26299.2| SJCHGC04399 protein [Schistosoma japonicum]
Length = 169
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 72/112 (64%), Gaps = 7/112 (6%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+ +V+V GDSGVGKT+LV+LI + PS TIGC+V +K Y ++ S+ E
Sbjct: 5 RAKVIVGGDSGVGKTALVHLICNQQTLLHPSYTIGCSVDIKVHLYNNNDSTK-------E 57
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEI 132
+F+ELWDI G +++ RSI Y ++G+I V+D + ++++ +L+KW +I
Sbjct: 58 HPYFIELWDIGGSNSHENTRSIFYQNLHGLILVYDCTNKKSQLNLRKWLCDI 109
>gi|195351566|ref|XP_002042305.1| GM13469 [Drosophila sechellia]
gi|194124148|gb|EDW46191.1| GM13469 [Drosophila sechellia]
Length = 279
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 69/113 (61%), Gaps = 8/113 (7%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+VR++VVGDSGVGKTSL +LI S RP T+GC + VK + G+S E
Sbjct: 11 RVRIVVVGDSGVGKTSLTHLITHNESLIRPGWTVGCNIQVKMHPF-REGTS-------RE 62
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIA 133
+FVEL+D+ G +K+ RS+ YS I+G+I VHDL+ +++ L W EI
Sbjct: 63 CPYFVELFDVGGSLNHKNTRSVFYSGIDGIILVHDLTNAKSQRQLIDWLYEIV 115
>gi|354477858|ref|XP_003501135.1| PREDICTED: rab-like protein 3-like [Cricetulus griseus]
Length = 236
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 37/231 (16%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ PS T+GC+V ++ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCHNQVLGNPSWTVGCSVDIRVHDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
+ +++ELWD+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E+
Sbjct: 58 KTYYIELWDVGGSVGSASSVKSTRAVFYNSVNGIILVHDLTNKKSSQNLYRWSLEVLNRD 117
Query: 137 TF-SAPLASGGP------GGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGL 189
+ L + G +P +VIG K D + S A +
Sbjct: 118 LVPTGVLVTNGDYDREQFADNQIPLLVIGTKLDQIHETKRHEVSIRTAFLAEDF------ 171
Query: 190 LPSSEELPLTESFP--GGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDE 238
++EE+ L + P G A K +R FF +I +RYF E
Sbjct: 172 --NAEEINLDCTNPRSSAAGSSNAVKLSR--------FFDKVIEKRYFCRE 212
>gi|26389872|dbj|BAC25804.1| unnamed protein product [Mus musculus]
Length = 236
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 103/229 (44%), Gaps = 33/229 (14%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ PS T+GC+V ++ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCHNQVLGNPSWTVGCSVDIRVHDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
+ +++ELWD+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E+
Sbjct: 58 KTYYIELWDVGGSVGSASSVKSTRAVFYNSVNGIILVHDLTNKKSSQNLYRWSLEVLNRD 117
Query: 137 TF-SAPLASGGP------GGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGL 189
+ L + G +P +VIG K D E R R +
Sbjct: 118 AVPTGVLVTNGDYDREQFADNQIPLLVIGTKLD-QIHETKRHEV-----LIRTAFLAEDF 171
Query: 190 LPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDE 238
L T P G A K +R FF +I +RYF E
Sbjct: 172 NAEEINLDCTNPRPSAAGSSNAVKLSR--------FFDKVIEKRYFFRE 212
>gi|195567210|ref|XP_002107163.1| GD17309 [Drosophila simulans]
gi|194204564|gb|EDX18140.1| GD17309 [Drosophila simulans]
Length = 279
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 69/113 (61%), Gaps = 8/113 (7%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+VR++VVGDSGVGKTSL +LI S RP T+GC + VK + G+S E
Sbjct: 11 RVRIVVVGDSGVGKTSLTHLITHNESLIRPGWTVGCNIQVKMHPF-REGTS-------RE 62
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIA 133
+FVEL+D+ G +K+ RS+ Y+ I+G+I VHDL+ +++ L W EI
Sbjct: 63 CPYFVELFDVGGSLNHKNTRSVFYAGIDGIILVHDLTNAKSQRQLVDWLYEIV 115
>gi|281207405|gb|EFA81588.1| Rab GTPase domain-containing protein [Polysphondylium pallidum
PN500]
Length = 401
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 83/160 (51%), Gaps = 30/160 (18%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+VR+ VVGD+ VGKTSLVNLI K PS T GC +K Y S
Sbjct: 54 KVRIAVVGDTTVGKTSLVNLICKNQVIDSPSWTCGCNTDIKIHEYHS------------- 100
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE----IATSG 136
+D+F+E D+ G +YK RS+ YS ING+I V+D++ + + ++++KW E I+TS
Sbjct: 101 KDYFIEFLDVGGSAKYKITRSLFYSGINGLIVVYDVTNKNSLSNVKKWIFEVLNKISTST 160
Query: 137 TFSAPLASGGPGGL-------------PVPYVVIGNKADV 163
+ P L +P +++GNK+D+
Sbjct: 161 ANWQLKETENPKLLELENIVHQNNKAPSIPLLILGNKSDL 200
>gi|413934381|gb|AFW68932.1| hypothetical protein ZEAMMB73_199267 [Zea mays]
Length = 114
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 75/115 (65%), Gaps = 5/115 (4%)
Query: 222 VMKFFRMLIRRRYFSDEMPAPNPWSISPTHKPIQRLDENSSDDDKFYSSGY--SSDPYNM 279
V+ + LIRRRYFS+E+PAP+PWS++P I + E +DDD F Y S YN
Sbjct: 2 VLWYIIQLIRRRYFSNELPAPSPWSLTPREDTILPV-ETVNDDDMFQRKSYGGQSYKYNG 60
Query: 280 LPPLPAQRNLTPPPTLYPQQPV-SVQENYNLPRFSLTGSQEISSSARSKRTDINV 333
+ PLPAQRNLTPPPTLYPQQP+ S ENY RFS + + S ++S R ++N+
Sbjct: 61 VTPLPAQRNLTPPPTLYPQQPMSSSSENYRYHRFSSSSIPDSSGGSKS-RANLNI 114
>gi|18088572|gb|AAH20832.1| RAB, member of RAS oncogene family-like 3 [Homo sapiens]
Length = 236
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 85/157 (54%), Gaps = 27/157 (17%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE----- 131
+ ++ELWD+ G K R++ Y+ +NG+IFVHDL+ +++ +L++W++E
Sbjct: 58 KTCYIELWDVGGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRWSLEALNRD 117
Query: 132 ------IATSGTFSAPLASGGPGGLPVPYVVIGNKAD 162
+ T+G + + +P +VIG K D
Sbjct: 118 LVPTGVLVTNGDYDQEQFADN----QIPLLVIGTKLD 150
>gi|195042845|ref|XP_001991507.1| GH12699 [Drosophila grimshawi]
gi|193901265|gb|EDW00132.1| GH12699 [Drosophila grimshawi]
Length = 272
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 68/113 (60%), Gaps = 8/113 (7%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+VR++VVGDSGVGKT L +LI S +RP T+GC + VK I G++
Sbjct: 4 RVRIVVVGDSGVGKTCLTHLIAHNESLTRPGWTVGCNIQVK-IHEFKEGTARQC------ 56
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIA 133
+F+EL+DI G +K+ RS+ YS I+GVI VHDL+ +++ L W EI
Sbjct: 57 -PYFIELFDIGGSLSHKNTRSVFYSGIHGVILVHDLTNGKSQEQLLDWLYEIV 108
>gi|410897263|ref|XP_003962118.1| PREDICTED: rab-like protein 3-like [Takifugu rubripes]
Length = 182
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 85/153 (55%), Gaps = 19/153 (12%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVQDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE-IATS 135
+ +++ELWD+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E +
Sbjct: 58 KAYYIELWDVGGSIGSASSVKSTRAVFYNSVNGIILVHDLTNKKSSQNLYRWSLEALNKD 117
Query: 136 GTFSAPLASGGP------GGLPVPYVVIGNKAD 162
+ + + S G PVP ++IG K D
Sbjct: 118 SSPTGVIVSNGEYDREQFAENPVPLLLIGTKFD 150
>gi|348566975|ref|XP_003469277.1| PREDICTED: rab-like protein 3-like [Cavia porcellus]
Length = 236
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 83/153 (54%), Gaps = 19/153 (12%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
+ +++ELWD+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E+
Sbjct: 58 KTYYIELWDVGGSVGSASSVKSTRTVFYNSVNGIILVHDLTNKKSSQNLYRWSLEVLNRD 117
Query: 137 TF-SAPLASGGP------GGLPVPYVVIGNKAD 162
+ + L G +P +VIG K D
Sbjct: 118 SVPTGVLVMNGDYDQEKFADNQIPLLVIGTKLD 150
>gi|442746475|gb|JAA65397.1| Hypothetical protein [Ixodes ricinus]
gi|442746477|gb|JAA65398.1| Hypothetical protein [Ixodes ricinus]
Length = 224
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 79/155 (50%), Gaps = 24/155 (15%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLVVGDSGVGK+S V+L+ T+GC+V VK Y +S +
Sbjct: 6 KVKVLVVGDSGVGKSSAVHLLCYNRPLGNALWTVGCSVEVKLHEYREGTAS--------Q 57
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
+ +FVELWDI G ++ R++ Y +G+I VHDL+ R++ +L+KW E+ F
Sbjct: 58 KSYFVELWDIGGSSSHRSARAVFYHSFHGLILVHDLTNRKSHENLRKWLAEV-----FCR 112
Query: 141 PLASGGPGGL-----------PVPYVVIGNKADVA 164
+ GL VP +V+ K D+
Sbjct: 113 DWQAKKSNGLLEFDQEMFADNQVPILVVATKTDLV 147
>gi|45387873|ref|NP_991296.1| rab-like protein 3 [Danio rerio]
gi|82187487|sp|Q6TNS7.1|RABL3_DANRE RecName: Full=Rab-like protein 3
gi|37362248|gb|AAQ91252.1| hypothetical protein MGC23920-like protein [Danio rerio]
gi|50603856|gb|AAH78191.1| Rabl3 protein [Danio rerio]
Length = 233
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 85/153 (55%), Gaps = 19/153 (12%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYREGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE-IATS 135
+ F++ELWD+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E ++
Sbjct: 58 KAFYIELWDVGGSVGSASSVKSTRAVFYNSVNGIILVHDLTNKKSSQNLYRWSLEALSKD 117
Query: 136 GTFSAPLASGGP------GGLPVPYVVIGNKAD 162
+ + + S G VP ++IG K D
Sbjct: 118 SSPTGIIVSNGDYDREQFAENAVPLLLIGTKFD 150
>gi|241997558|ref|XP_002433428.1| conserved hypothetical protein [Ixodes scapularis]
gi|215490851|gb|EEC00492.1| conserved hypothetical protein [Ixodes scapularis]
Length = 224
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 79/155 (50%), Gaps = 24/155 (15%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLVVGDSGVGK+S V+L+ T+GC+V VK Y +S +
Sbjct: 6 KVKVLVVGDSGVGKSSAVHLLCYNRPLGNALWTVGCSVEVKLHEYREGTAS--------Q 57
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
+ +FVELWDI G ++ R++ Y +G+I VHDL+ R++ +L+KW E+ F
Sbjct: 58 KSYFVELWDIGGSSSHRSARAVFYHSFHGLILVHDLTNRKSHENLRKWLAEV-----FCR 112
Query: 141 PLASGGPGGL-----------PVPYVVIGNKADVA 164
+ GL VP +V+ K D+
Sbjct: 113 DWQAKKSNGLLEFDQEMFADNQVPILVVATKTDLV 147
>gi|387017968|gb|AFJ51102.1| Rab-like protein 3-like [Crotalus adamanteus]
Length = 236
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 81/153 (52%), Gaps = 19/153 (12%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCHNQMLGNPSWTVGCSVDVRIHDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
+ +F+ELWD+ G K R + Y+ +NG+I VHDL+ +++ +L +W++E
Sbjct: 58 KIYFIELWDVGGSVGSASSVKSTRLMFYNSVNGIILVHDLTNKKSSQNLYRWSLEALNKD 117
Query: 137 TF-SAPLASGGP------GGLPVPYVVIGNKAD 162
S+ L + G +P +VIG K D
Sbjct: 118 VIPSSVLVTNGDYDREQFADNQIPLLVIGTKLD 150
>gi|410970524|ref|XP_003991729.1| PREDICTED: rab-like protein 3 [Felis catus]
Length = 236
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 53/239 (22%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE----- 131
+ +++ELWD+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E
Sbjct: 58 KTYYIELWDVGGSVGSASSVKSTRAVFYNSVNGIILVHDLTNKKSSQNLYRWSLEALNRD 117
Query: 132 ------IATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWV- 184
+ T+G + + +P +VIG K D + +A R V
Sbjct: 118 LVPTGVLVTNGDYDREQFADN----QIPLLVIGTKLD------------QIHEAKRHEVL 161
Query: 185 EKQGLLP---SSEELPLTESFPG--GGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDE 238
+ L ++EE+ L + P G A K +R FF +I +RYF E
Sbjct: 162 TRTAFLAEDFNAEEINLDCTNPRYLAAGSSNAVKLSR--------FFDKVIEKRYFLRE 212
>gi|395519044|ref|XP_003763663.1| PREDICTED: rab-like protein 3 [Sarcophilus harrisii]
Length = 236
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 82/153 (53%), Gaps = 19/153 (12%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
+ F++ELWD+ G K R++ ++ +NG+I VHDL+ +++ +L +W++E
Sbjct: 58 KTFYIELWDVGGSVGGASSVKSTRAVFFNSVNGIILVHDLTNKKSSQNLYRWSLEAVNRD 117
Query: 137 TF-SAPLASGGP------GGLPVPYVVIGNKAD 162
S L + G +P +VIG K D
Sbjct: 118 LVPSGVLVTNGDYDREQFADNQIPLLVIGTKLD 150
>gi|296226158|ref|XP_002758810.1| PREDICTED: rab-like protein 3 [Callithrix jacchus]
gi|403288524|ref|XP_003935449.1| PREDICTED: rab-like protein 3 [Saimiri boliviensis boliviensis]
Length = 236
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 111/234 (47%), Gaps = 43/234 (18%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
+ +++ELWD+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E
Sbjct: 58 KTYYIELWDVGGSVGSASSVKSTRAVFYNSVNGIILVHDLTNKKSSQNLYRWSLEALNRD 117
Query: 137 TF-SAPLASGGP------GGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGL 189
+ + L + G +P +VIG K D E R + + +
Sbjct: 118 SVPTGVLVTNGDYDREQFADNQIPLLVIGTKLD-QIHETKR----------HEVLTRTAF 166
Query: 190 LP---SSEELPLTESFPG--GGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDE 238
L ++EE+ L + P G A K +R FF +I +RYF E
Sbjct: 167 LAEDFNAEEINLDCTNPRYLAAGSSNAVKLSR--------FFDKVIEKRYFLRE 212
>gi|72113445|ref|XP_792259.1| PREDICTED: rab-like protein 3-like [Strongylocentrotus purpuratus]
gi|115783454|ref|XP_001199196.1| PREDICTED: rab-like protein 3-like [Strongylocentrotus purpuratus]
Length = 225
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 106/227 (46%), Gaps = 39/227 (17%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V++LVVGDSGVGK+SLV+LI G S TIG ++ VK Y + +
Sbjct: 8 KVKILVVGDSGVGKSSLVHLICHGQPILNTSYTIGASLDVKIHEYKEGTPA--------Q 59
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIAT------ 134
+ FVE WDI G + + R I Y+ +NG+I VHDL+ R++ +L KW EI
Sbjct: 60 KTCFVEFWDIGGSVNHANSRHIFYTALNGIILVHDLTNRKSHANLGKWLSEILQREQNNG 119
Query: 135 SGTFSAPLASGGP---GGLPVPYVVIGNKAD-VAAKEGTRGSSGNLVDAARQWVEKQGLL 190
S ++ P G P +V+G K D + + + S ++ +
Sbjct: 120 SERHRTSVSEYDPEQFAGHHTPILVVGVKKDQLDTQRQNKLQSSSIAEEC---------- 169
Query: 191 PSSEELPL--TESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYF 235
++E+ L T++ G A K +R FF +I RRYF
Sbjct: 170 -GADEINLNCTDAKHLAPGTTNAVKFSR--------FFDKVIERRYF 207
>gi|149568878|ref|XP_001508253.1| PREDICTED: rab-like protein 3-like [Ornithorhynchus anatinus]
Length = 235
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 86/153 (56%), Gaps = 19/153 (12%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y G+ E
Sbjct: 5 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDY-KEGTP-------EE 56
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
+ +++ELWD+ G K+ R++ Y+ +NG+I VHDL+ +++ +L +W++E
Sbjct: 57 KTYYIELWDVGGSVGSANSVKNTRAVFYNAVNGIILVHDLTNKKSSQNLYRWSLEALNRD 116
Query: 137 TF-SAPLASGGP------GGLPVPYVVIGNKAD 162
+ L +GG +P +VIG K D
Sbjct: 117 QGPTGVLVTGGDYDREQFADNQLPLLVIGTKLD 149
>gi|198468005|ref|XP_001354581.2| GA18434 [Drosophila pseudoobscura pseudoobscura]
gi|198146208|gb|EAL31635.2| GA18434 [Drosophila pseudoobscura pseudoobscura]
Length = 281
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 68/112 (60%), Gaps = 8/112 (7%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+VR+++VGDSGVGKT L +LI S +RP T+GC + VK I G++ S
Sbjct: 5 RVRIVIVGDSGVGKTCLTHLIAHNESLTRPGWTVGCNIQVK-IHQFKEGTARQS------ 57
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEI 132
+FVEL+DI G +K+ R + YS ++G+I VHDL+ +++ L W EI
Sbjct: 58 -QYFVELFDIGGSLSHKNTRGVFYSGVHGIILVHDLTNGKSQEQLLDWLHEI 108
>gi|195456976|ref|XP_002075371.1| GK15525 [Drosophila willistoni]
gi|194171456|gb|EDW86357.1| GK15525 [Drosophila willistoni]
Length = 286
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 67/113 (59%), Gaps = 8/113 (7%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+VR++VVGDSGVGKT L +LI RP T+GC + VK Y G++
Sbjct: 4 RVRIVVVGDSGVGKTCLTHLIAHNECLIRPGWTVGCNIQVKIHEY-KEGTARQC------ 56
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIA 133
+FVE++DI G +K+ RS+ YS I+G+I VHDL+ +++ L W +EI
Sbjct: 57 -PYFVEMFDIGGSLSHKNTRSVFYSGIHGIILVHDLTNGKSQEQLLDWLIEIV 108
>gi|291400583|ref|XP_002716694.1| PREDICTED: rab-like protein 3-like [Oryctolagus cuniculus]
Length = 236
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 113/240 (47%), Gaps = 48/240 (20%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE----- 131
+ +++ELWD+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E
Sbjct: 58 KAYYIELWDVGGSVGSASSVKSTRAVFYNSVNGIILVHDLTNKKSSQNLYRWSLEALNRD 117
Query: 132 ------IATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVE 185
+ T+G + + +P +VIG K D + A ++
Sbjct: 118 LVPTGVLVTNGDYDREQFADN----QIPLLVIGTKLDQIHETKRHEVLTRTAFLAEDFI- 172
Query: 186 KQGLLPSSEELPLTESFPG--GGGLIAAAKEARYDKEAVMKFFRMLIRRRYF---SDEMP 240
+EE+ L + P G A K +R FF +I +RYF S+++P
Sbjct: 173 -------AEEINLDCTNPRYLAAGSSNAVKLSR--------FFDKVIEKRYFLRESNQIP 217
>gi|109948290|ref|NP_001035964.1| rab-like protein 3 [Mus musculus]
gi|81881405|sp|Q9D4V7.1|RABL3_MOUSE RecName: Full=Rab-like protein 3
gi|12854707|dbj|BAB30113.1| unnamed protein product [Mus musculus]
gi|29747935|gb|AAH50194.1| RAB, member of RAS oncogene family-like 3 [Mus musculus]
gi|148665544|gb|EDK97960.1| mCG128235, isoform CRA_b [Mus musculus]
Length = 236
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 110/234 (47%), Gaps = 43/234 (18%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ PS T+GC+V ++ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCHNQVLGNPSWTVGCSVDIRVHDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
+ +++ELWD+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E+
Sbjct: 58 KTYYIELWDVGGSVGSASSVKSTRAVFYNSVNGIILVHDLTNKKSSQNLYRWSLEVLNRD 117
Query: 137 TF-SAPLASGGP------GGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGL 189
+ L + G +P +VIG K D E R + + +
Sbjct: 118 AVPTGVLVTNGDYDREQFADNQIPLLVIGTKLD-QIHETKR----------HEVLIRTAF 166
Query: 190 LP---SSEELPLTESFP--GGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDE 238
L ++EE+ L + P G A K +R FF +I +RYF E
Sbjct: 167 LAEDFNAEEINLDCTNPRSSAAGSSNAVKLSR--------FFDKVIEKRYFFRE 212
>gi|431919718|gb|ELK18075.1| Rab-like protein 3 [Pteropus alecto]
Length = 236
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 114/239 (47%), Gaps = 46/239 (19%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE-IATS 135
+ +++ELWD+ G K R++ Y+ +NG+I VHDL+ +++ +L +W+ E +
Sbjct: 58 KTYYIELWDVGGSVGSASSVKSTRAVFYNSVNGIILVHDLTNKKSSQNLHRWSREALNRD 117
Query: 136 GTFSAPLASGGP------GGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGL 189
+ L + G +P +VIG K D E R + + +
Sbjct: 118 LVLTGVLVTNGDYDQEQFADNHIPLLVIGTKLD-QIHETRR----------HEVLTRTAF 166
Query: 190 LP---SSEELPLTESFPG--GGGLIAAAKEARYDKEAVMKFFRMLIRRRYF---SDEMP 240
L ++EE+ L + P G A K +R FF +I +RYF S+++P
Sbjct: 167 LAEDFNAEEINLDCTNPRYLAAGSSNAVKLSR--------FFDKVIEKRYFLRDSNQIP 217
>gi|284813535|ref|NP_001070274.2| rab-like protein 3 [Bos taurus]
gi|426217528|ref|XP_004003005.1| PREDICTED: rab-like protein 3 [Ovis aries]
gi|162416301|sp|Q32LJ6.2|RABL3_BOVIN RecName: Full=Rab-like protein 3
Length = 236
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 111/235 (47%), Gaps = 51/235 (21%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE----- 131
+ +++ELWD+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E
Sbjct: 58 KTYYIELWDVGGSVGSASSVKSTRAVFYNSVNGIILVHDLTNKKSSQNLYRWSLEALNRD 117
Query: 132 ------IATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVE 185
+ T+G + + +P +VIG K D E R + +
Sbjct: 118 LVPTGVLVTNGDYDREQFADN----QIPLLVIGTKLD-QIHENKR----------HEVLT 162
Query: 186 KQGLLP---SSEELPLTESFPG--GGGLIAAAKEARYDKEAVMKFFRMLIRRRYF 235
+ L ++EE+ L + P G A K +R FF +I +RYF
Sbjct: 163 RTAFLAEDFNAEEINLDCTNPRYLAAGSSNAVKLSR--------FFDKVIEKRYF 209
>gi|126325747|ref|XP_001363389.1| PREDICTED: rab-like protein 3-like [Monodelphis domestica]
Length = 236
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 82/153 (53%), Gaps = 19/153 (12%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
+ F++ELWD+ G K R++ ++ +NG+I VHDL+ +++ +L +W++E
Sbjct: 58 KTFYIELWDVGGSVGGASSVKSTRAVFFNSVNGIILVHDLTNKKSSQNLYRWSLEAVNKD 117
Query: 137 TF-SAPLASGGP------GGLPVPYVVIGNKAD 162
S L + G +P +VIG K D
Sbjct: 118 LVPSGVLVTNGDYDREQFAENQIPLLVIGTKLD 150
>gi|157819987|ref|NP_001101789.1| rab-like protein 3 [Rattus norvegicus]
gi|149060531|gb|EDM11245.1| RAB, member of RAS oncogene family-like 3 (predicted), isoform
CRA_a [Rattus norvegicus]
Length = 236
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 19/153 (12%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ PS T+GC+V ++ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCHNQVLGNPSWTVGCSVDIRVHDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
+ +++ELWD+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E+
Sbjct: 58 KTYYIELWDVGGSVGSASSVKSTRAVFYNSVNGIILVHDLTNKKSSQNLYRWSLEVLNRD 117
Query: 137 TF-SAPLASGGP------GGLPVPYVVIGNKAD 162
+ L + G +P +VIG K D
Sbjct: 118 AVPTGVLVTNGDYDREQFADNQIPLLVIGTKLD 150
>gi|224043972|ref|XP_002187430.1| PREDICTED: Rab-like protein 3 [Taeniopygia guttata]
Length = 236
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 82/153 (53%), Gaps = 19/153 (12%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCHNQVLGNPSWTVGCSVDVRIHDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
+ +++ELWD+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E
Sbjct: 58 KTYYIELWDVGGSVGSATSVKSTRAVFYNLLNGIILVHDLTNKKSSQNLYRWSLEALNRD 117
Query: 137 TF-SAPLASGGP------GGLPVPYVVIGNKAD 162
+ L + G G +P +VIG K D
Sbjct: 118 VAPTGVLVTNGDYDREQFGDNQIPLLVIGTKLD 150
>gi|156717510|ref|NP_001096295.1| rab-like protein 3 [Xenopus (Silurana) tropicalis]
gi|162416066|sp|A4IHM6.1|RABL3_XENTR RecName: Full=Rab-like protein 3
gi|134025480|gb|AAI35595.1| LOC100124869 protein [Xenopus (Silurana) tropicalis]
Length = 235
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 84/157 (53%), Gaps = 27/157 (17%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRLHEYREGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE----- 131
+ +++ELWD+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E
Sbjct: 58 KTYYIELWDVGGSVGSASSVKSTRAVFYNAVNGIILVHDLTNKKSSQNLYRWSLEALNRD 117
Query: 132 ------IATSGTFSAPLASGGPGGLPVPYVVIGNKAD 162
+ T+G + + +P +VIG K D
Sbjct: 118 LQPTGVLVTNGDYDREQFADN----QIPLLVIGTKLD 150
>gi|345796060|ref|XP_850572.2| PREDICTED: RAB, member of RAS oncogene family-like 3 [Canis lupus
familiaris]
Length = 236
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 112/238 (47%), Gaps = 51/238 (21%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE----- 131
+ +++ELWD+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E
Sbjct: 58 KTYYIELWDVGGSVGSASSVKSTRAVFYNSVNGIILVHDLTNKKSSQNLYRWSLEALNRD 117
Query: 132 ------IATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVE 185
+ T+G + + +P +VIG K D E R + +
Sbjct: 118 LVPTGVLVTNGDYDREQFADN----QIPLLVIGTKLD-QIHETKR----------HEVLT 162
Query: 186 KQGLLP---SSEELPLTESFPG--GGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDE 238
+ L ++EE+ L + P G A K +R FF +I +RYF E
Sbjct: 163 RTAFLAEDFNAEEINLDCTNPRYLAAGSSNAVKLSR--------FFDKVIEKRYFLRE 212
>gi|18921187|ref|NP_573166.1| CG4789 [Drosophila melanogaster]
gi|17945010|gb|AAL48567.1| RE04047p [Drosophila melanogaster]
gi|22832413|gb|AAF48668.2| CG4789 [Drosophila melanogaster]
gi|220947718|gb|ACL86402.1| CG4789-PA [synthetic construct]
gi|220957024|gb|ACL91055.1| CG4789-PA [synthetic construct]
Length = 274
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 8/113 (7%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+VR++VVGDSGVGKTSL +LI + RP T+GC + VK + G++ E
Sbjct: 6 RVRIVVVGDSGVGKTSLTHLITHNEALIRPGWTVGCNIQVKMHPF-REGTA-------RE 57
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIA 133
+FVEL+D+ G +K+ RS+ Y+ I+G+I VHDL+ +++ L W EI
Sbjct: 58 CPYFVELFDVGGSLNHKNTRSVFYAGIDGIILVHDLTNAKSQRQLIDWLYEIV 110
>gi|225717100|gb|ACO14396.1| Rab-like protein 3 [Esox lucius]
Length = 233
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 113/229 (49%), Gaps = 37/229 (16%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE-IATS 135
+ +++ELWD+ G K R++ Y+ +NG++ VHDL+ +++ +L +W++E +
Sbjct: 58 KTYYIELWDVGGSVGCASSLKSTRAVFYNSVNGIVLVHDLTNKKSSQNLYRWSLEALNKD 117
Query: 136 GTFSAPLASGGP------GGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGL 189
+ + + S G VP ++IG K D + + N V ++ +
Sbjct: 118 SSPTGVIVSNGDYDREQFADSSVPLLLIGTKFDQIPE-----NKKNDVLTRTAFLSED-- 170
Query: 190 LPSSEELPLTESFPG--GGGLIAAAKEARYDKEAVMKFFRMLIRRRYFS 236
++EEL L + P G A K +R FF +I +RYF+
Sbjct: 171 -FNAEELNLDCTNPRYLAAGTSNAVKLSR--------FFDKVIEKRYFT 210
>gi|355715019|gb|AES05197.1| RAB, member of RAS oncoprotein family-like 3 [Mustela putorius
furo]
Length = 236
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 112/238 (47%), Gaps = 51/238 (21%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y E
Sbjct: 7 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTP--------EE 58
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE----- 131
+ +++ELWD+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E
Sbjct: 59 KTYYIELWDVGGSVGSASSVKSTRAVFYNSVNGIILVHDLTNKKSSQNLYRWSLEALNRD 118
Query: 132 ------IATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVE 185
+ T+G + + +P +VIG K D E R + +
Sbjct: 119 LVPTGVLVTNGDYDREQFADN----QIPLLVIGTKLD-QIHETKR----------HEVLT 163
Query: 186 KQGLLP---SSEELPLTESFPG--GGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDE 238
+ L ++EE+ L + P G A K +R FF +I +RYF E
Sbjct: 164 RTAFLAEDFNAEEINLDCTNPRYLAAGSSNAVKLSR--------FFDKVIEKRYFLRE 213
>gi|344282523|ref|XP_003413023.1| PREDICTED: rab-like protein 3-like [Loxodonta africana]
Length = 236
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 84/157 (53%), Gaps = 27/157 (17%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE----- 131
+ +++ELWD+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E
Sbjct: 58 KTYYIELWDVGGSVGSASSVKSTRAVFYNSVNGIILVHDLTNKKSSQNLYRWSLEALNRD 117
Query: 132 ------IATSGTFSAPLASGGPGGLPVPYVVIGNKAD 162
+ T+G + + +P +VIG K D
Sbjct: 118 LAPTGVLVTNGDYDREQFADN----QIPLLVIGTKLD 150
>gi|149731285|ref|XP_001502422.1| PREDICTED: rab-like protein 3-like [Equus caballus]
Length = 236
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 84/157 (53%), Gaps = 27/157 (17%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE----- 131
+ +++ELWD+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E
Sbjct: 58 KTYYIELWDVGGSVGSASSVKSTRAVFYNSVNGIILVHDLTNKKSSQNLYRWSLEALNRD 117
Query: 132 ------IATSGTFSAPLASGGPGGLPVPYVVIGNKAD 162
+ T+G + + +P +VIG K D
Sbjct: 118 LVPTGVLVTNGDYDREQFADN----QIPLLVIGTKLD 150
>gi|428163138|gb|EKX32227.1| hypothetical protein GUITHDRAFT_175451 [Guillardia theta CCMP2712]
Length = 246
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 84/164 (51%), Gaps = 31/164 (18%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
++R+LV+GDSGVGKTSL++LI +G RP T+GCTV +K S + G +
Sbjct: 10 RLRLLVMGDSGVGKTSLMHLICEGEELRRPRSTVGCTVHMKL-------HESKLLPGKTA 62
Query: 81 RDFFVELWDISGHERYKDCRSILYSQ-INGVIFVHDLSQRRTKTSLQKWAVEIATSGTFS 139
FVE WD+ G R++ R + YS ++GVI VHD++ ++ +L+KW E + +
Sbjct: 63 ---FVEFWDLGGSARFQTSRQVFYSNAVDGVILVHDVTNSISRRNLEKWKQEWTQHASGA 119
Query: 140 APLAS----------GGPG----------GLPVPYVVIGNKADV 163
S G P L VP + IGNK D+
Sbjct: 120 GGAGSWDRTWGDDVMGSPDFKRSTIQRAPSLFVPTLTIGNKIDL 163
>gi|71896811|ref|NP_001025951.1| rab-like protein 3 [Gallus gallus]
gi|82233851|sp|Q5ZKR4.1|RABL3_CHICK RecName: Full=Rab-like protein 3
gi|53130700|emb|CAG31679.1| hypothetical protein RCJMB04_9j2 [Gallus gallus]
Length = 230
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 83/157 (52%), Gaps = 27/157 (17%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCHNQVLGNPSWTVGCSVDVRIHDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE----- 131
+ +++ELWD+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E
Sbjct: 58 KTYYIELWDVGGSVGSATSVKSTRAVFYNSLNGIILVHDLTNKKSSQNLYRWSLEALNRD 117
Query: 132 ------IATSGTFSAPLASGGPGGLPVPYVVIGNKAD 162
+ T+G + + +P +VIG K D
Sbjct: 118 VAPTGVLVTNGDYDREQFADN----QIPLLVIGTKLD 150
>gi|66807927|ref|XP_637686.1| Rab GTPase domain-containing protein [Dictyostelium discoideum AX4]
gi|60466118|gb|EAL64183.1| Rab GTPase domain-containing protein [Dictyostelium discoideum AX4]
Length = 560
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 14/113 (12%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSR-PSQTIGCTVGVKHITYGSSGSSSNSIKGDS 79
+VRVLV+GD+ VGK+SLV+LI + +R PS T+GC VK Y S
Sbjct: 53 RVRVLVIGDTAVGKSSLVHLICNDQALTRSPSWTVGCNTDVKIHEYHS------------ 100
Query: 80 ERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEI 132
+D+++E DI G +YK R ILY QI+G+I V+DL+ + + +++KW E+
Sbjct: 101 -KDYYIEFIDIGGSTKYKITRPILYHQISGIIVVYDLTNKISLKNVKKWIFEV 152
>gi|301781164|ref|XP_002925999.1| PREDICTED: rab-like protein 3-like [Ailuropoda melanoleuca]
Length = 236
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 84/157 (53%), Gaps = 27/157 (17%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE----- 131
+ +++ELWD+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E
Sbjct: 58 KTYYIELWDVGGSVGSASSVKSTRAVFYNSVNGIILVHDLTNKKSSQNLYRWSLEALNRD 117
Query: 132 ------IATSGTFSAPLASGGPGGLPVPYVVIGNKAD 162
+ T+G + + +P +VIG K D
Sbjct: 118 LVPTGVLVTNGDYDREQFADN----QIPLLVIGTKLD 150
>gi|327285246|ref|XP_003227345.1| PREDICTED: rab-like protein 3-like [Anolis carolinensis]
Length = 236
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 81/153 (52%), Gaps = 19/153 (12%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCHNQMLGNPSWTVGCSVDVRIHDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
+ +++ELWD+ G K R + Y+ +NG+I VHDL+ +++ +L +W++E+
Sbjct: 58 KMYYIELWDVGGSVGSASSVKSTRVMFYNSVNGIILVHDLTNKKSSQNLYRWSLEVLNRD 117
Query: 137 TF-SAPLASGGP------GGLPVPYVVIGNKAD 162
S L + G +P +VIG K D
Sbjct: 118 AAPSGVLVTNGDYDREQFADNQIPLLVIGTKLD 150
>gi|194769854|ref|XP_001967016.1| GF21747 [Drosophila ananassae]
gi|190622811|gb|EDV38335.1| GF21747 [Drosophila ananassae]
Length = 301
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 68/113 (60%), Gaps = 8/113 (7%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+VR++VVGDSGVGKT L +LI S RP T+GC + VK + +I+ +
Sbjct: 4 RVRIVVVGDSGVGKTCLTHLIAHNESLIRPGWTVGCNIQVKIHEF-----REGTIR---Q 55
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIA 133
+FVEL+DI G +K+ RS+ YS I+G+I VHDL+ +++ L W EI
Sbjct: 56 CPYFVELFDIGGSLSHKNTRSVFYSGIHGIILVHDLTNAKSQEQLIDWLYEIV 108
>gi|148227886|ref|NP_001085620.1| rab-like protein 3 [Xenopus laevis]
gi|82184483|sp|Q6GPS4.1|RABL3_XENLA RecName: Full=Rab-like protein 3
gi|49257301|gb|AAH73035.1| MGC82648 protein [Xenopus laevis]
Length = 235
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 83/157 (52%), Gaps = 27/157 (17%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRLHEYREGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE----- 131
+ ++ ELWD+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E
Sbjct: 58 KTYYTELWDVGGSVGSASSVKSTRAVFYNAVNGIILVHDLTNKKSSQNLYRWSLEALNRD 117
Query: 132 ------IATSGTFSAPLASGGPGGLPVPYVVIGNKAD 162
+ T+G + + +P +VIG K D
Sbjct: 118 LQPMGVLVTNGDYDREQFADN----QIPLLVIGTKLD 150
>gi|195135005|ref|XP_002011926.1| GI14464 [Drosophila mojavensis]
gi|193909180|gb|EDW08047.1| GI14464 [Drosophila mojavensis]
Length = 272
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 67/113 (59%), Gaps = 8/113 (7%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+VR++VVGDSGVGKT L +L+ S RP T+GC + VK I G++
Sbjct: 4 RVRIVVVGDSGVGKTCLTHLVAHNESLIRPGWTVGCNIQVK-IHEFKEGTARQC------ 56
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIA 133
+F+EL+DI G +K+ RS+ YS I+G+I VHDL+ +++ L W EI
Sbjct: 57 -PYFIELFDIGGSLSHKNTRSVFYSGIHGIILVHDLTNGKSQEQLLDWLFEIV 108
>gi|195393558|ref|XP_002055421.1| GJ18799 [Drosophila virilis]
gi|194149931|gb|EDW65622.1| GJ18799 [Drosophila virilis]
Length = 273
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 67/113 (59%), Gaps = 8/113 (7%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+VR++VVGDSGVGKT L +LI S RP T+GC + VK I G++
Sbjct: 4 RVRIVVVGDSGVGKTCLTHLIAHNESLIRPGWTVGCNIQVK-IHEFKEGTARQC------ 56
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIA 133
+F+EL+DI G +K+ RS+ Y+ I+GVI VHDL+ +++ L W EI
Sbjct: 57 -PYFIELFDIGGSLSHKNTRSVFYTGIHGVILVHDLTNGKSQEQLLDWLYEIV 108
>gi|395844792|ref|XP_003795135.1| PREDICTED: rab-like protein 3 [Otolemur garnettii]
Length = 236
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 108/235 (45%), Gaps = 45/235 (19%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE----- 131
+ +++ELWD+ G K R++ Y+ +NG+I VHDL+ +++ +L +W+ E
Sbjct: 58 KTYYIELWDVGGSVGSASSVKSTRAVFYNSVNGIILVHDLTNKKSSQNLYRWSSEALNRD 117
Query: 132 ------IATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVE 185
+ T+G + + +P +VIG K D + A ++
Sbjct: 118 LVPTGVLVTNGDYDREQFADN----QIPLLVIGTKLDQIHETKRHEVLTRTAFLAEDFI- 172
Query: 186 KQGLLPSSEELPLTESFPG--GGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDE 238
+EE+ L + P G A K +R FF +I +RYF E
Sbjct: 173 -------AEEINLDCTNPRYLAAGSSNAVKLSR--------FFDKVIEKRYFLRE 212
>gi|432114610|gb|ELK36451.1| Rab-like protein 3 [Myotis davidii]
Length = 217
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 81/153 (52%), Gaps = 19/153 (12%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTP--------VE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
+ +++ELWD+ G K R++ Y+ ING+I VHDL+ +++ +L +W+ E
Sbjct: 58 KTYYIELWDVGGSVGSASSVKSTRAVFYNSINGIILVHDLTNKKSSQNLYRWSSEALNKD 117
Query: 137 TF-SAPLASGGP------GGLPVPYVVIGNKAD 162
+ L + G +P +VIG K D
Sbjct: 118 LVPTGVLVTNGDYDQEQFAENQIPLLVIGTKLD 150
>gi|195480868|ref|XP_002101425.1| GE17627 [Drosophila yakuba]
gi|194188949|gb|EDX02533.1| GE17627 [Drosophila yakuba]
Length = 276
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 67/113 (59%), Gaps = 8/113 (7%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+VR++VVGDSGVGKT L +LI S RP T+GC + VK I G++
Sbjct: 6 RVRIVVVGDSGVGKTCLTHLIAHNESLIRPGWTVGCNIQVK-IHEFKEGTARQC------ 58
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIA 133
+FVEL+D+ G +K+ RS+ Y+ I+G+I VHDL+ +++ L W EI
Sbjct: 59 -PYFVELFDVGGSLSHKNTRSVFYTGIHGIILVHDLTNGKSQEQLLDWLYEIV 110
>gi|312373742|gb|EFR21433.1| hypothetical protein AND_17056 [Anopheles darlingi]
Length = 285
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 100/223 (44%), Gaps = 40/223 (17%)
Query: 30 SGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERDFFVELWD 89
+GVGKT L +LI + P T+G +V VK Y +S N+ FF+ELWD
Sbjct: 40 AGVGKTCLTHLIANHEPLTSPGWTVGASVEVKLHEYKEGTTSQNT--------FFIELWD 91
Query: 90 ISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA----PLASG 145
+ G +K+ R + ++ +G+I VHDL+ R++ +LQ+W VEI L
Sbjct: 92 VGGSISHKNTRGVFFNPTHGIILVHDLTNRKSHENLQRWLVEILNKDGKDVLKGNELLDI 151
Query: 146 GP----GGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
P G +P +VIG K D+ L DA +Q + + + S E
Sbjct: 152 DPEQFLGSTQIPILVIGTKLDM------------LDDAHKQKILNRTSVGSIAEQ----- 194
Query: 202 FPGGGGLIAAAKEAR------YDKEAVMKFFRMLIRRRYFSDE 238
G + EAR D + +FF +I R+Y++ E
Sbjct: 195 -CGADEICLNCHEARSLASGTTDSVKLARFFDKVIERKYYNRE 236
>gi|194891471|ref|XP_001977498.1| GG19080 [Drosophila erecta]
gi|190649147|gb|EDV46425.1| GG19080 [Drosophila erecta]
Length = 276
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 67/113 (59%), Gaps = 8/113 (7%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+VR++VVGDSGVGKT L +LI S RP T+GC + VK I G++
Sbjct: 6 RVRIVVVGDSGVGKTCLTHLIAHNESLIRPGWTVGCNIQVK-IHEFKEGTARQC------ 58
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIA 133
+FVEL+D+ G +K+ RS+ Y+ I+G++ VHDL+ +++ L W EI
Sbjct: 59 -PYFVELFDVGGSLSHKNTRSVFYTGIHGIVLVHDLTNGKSQEQLIDWLYEIV 110
>gi|242016033|ref|XP_002428643.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212513306|gb|EEB15905.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 305
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 76/141 (53%), Gaps = 15/141 (10%)
Query: 31 GVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERDFFVELWDI 90
GVGKTSL +LI + + PS T+GC+V VK + ++ +F+ELWDI
Sbjct: 22 GVGKTSLTHLISQNETIINPSWTVGCSVEVKLHEFKEGLPQ--------QKTYFIELWDI 73
Query: 91 SGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATS---GTFSAPL----A 143
G +++ RSI Y ++G+I VHDL+ R+++ +LQKW E+ G + P +
Sbjct: 74 GGSSSHRNTRSIFYYPVHGIILVHDLTNRKSEQNLQKWLAEVLNCEADGKNTKPFDDFDS 133
Query: 144 SGGPGGLPVPYVVIGNKADVA 164
G +P +V+G K D+
Sbjct: 134 EQFFGSTQIPILVVGTKQDLV 154
>gi|81674244|gb|AAI09546.1| RAB, member of RAS oncogene family-like 3 [Bos taurus]
Length = 129
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 70/115 (60%), Gaps = 12/115 (10%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE 131
+ +++ELWD+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E
Sbjct: 58 KTYYIELWDVGGSVGSASSVKSTRAVFYNSVNGIILVHDLTNKKSSQNLYRWSLE 112
>gi|12847299|dbj|BAB27514.1| unnamed protein product [Mus musculus]
gi|148665543|gb|EDK97959.1| mCG128235, isoform CRA_a [Mus musculus]
gi|149060532|gb|EDM11246.1| RAB, member of RAS oncogene family-like 3 (predicted), isoform
CRA_b [Rattus norvegicus]
Length = 129
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 72/116 (62%), Gaps = 12/116 (10%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ PS T+GC+V ++ Y G+ E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCHNQVLGNPSWTVGCSVDIRVHDY-KEGTP-------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEI 132
+ +++ELWD+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E+
Sbjct: 58 KTYYIELWDVGGSVGSASSVKSTRAVFYNSVNGIILVHDLTNKKSSQNLYRWSLEV 113
>gi|318037259|ref|NP_001187394.1| rab-like protein 3 [Ictalurus punctatus]
gi|308322899|gb|ADO28587.1| rab-like protein 3 [Ictalurus punctatus]
Length = 233
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 19/153 (12%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCHNQVLGNPSWTVGCSVDVRVHDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE-IATS 135
+ +++ELWD+ G K R++ Y+ +NG+I VHDL+ ++ +L +W++E +
Sbjct: 58 KTYYIELWDVGGSVGSASSVKSTRAVFYNSVNGIILVHDLTNKKFSQNLYRWSMEALNKD 117
Query: 136 GTFSAPLASGGP------GGLPVPYVVIGNKAD 162
+ + + S G +P ++IG K D
Sbjct: 118 SSPTGVIVSNGDYDREQFADSIIPLLLIGTKYD 150
>gi|198424043|ref|XP_002126472.1| PREDICTED: similar to RAB, member of RAS oncogene family-like 3
[Ciona intestinalis]
Length = 255
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 79/156 (50%), Gaps = 22/156 (14%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITY--GSSGSSSNSIKGD 78
+V+VLV+G+SGVGK+S +L+ + P TIGCT+ +K Y G+S
Sbjct: 9 KVKVLVLGNSGVGKSSFTHLLCHNQANKNPGYTIGCTIDIKLHEYKPGTS---------- 58
Query: 79 SERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEI----AT 134
E+ F +E+WDI + R I Y+ ING+I VHDL+ ++ +L W + +T
Sbjct: 59 EEKTFCIEIWDIGASNSHASSRFIFYNNINGIILVHDLTNSKSLHNLPIWLNNVLKYDST 118
Query: 135 SGTFSAPLASGGPGG------LPVPYVVIGNKADVA 164
G S ++S +P +++G K D+
Sbjct: 119 GGLTSVKVSSQNTSAGDDSAQCSIPLLMVGTKLDLV 154
>gi|195169893|ref|XP_002025748.1| GL18279 [Drosophila persimilis]
gi|194110601|gb|EDW32644.1| GL18279 [Drosophila persimilis]
Length = 182
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 8/105 (7%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+VR+++VGDSGVGKT L +LI S +RP T+GC + VK I G++ S
Sbjct: 5 RVRIVIVGDSGVGKTCLTHLIAHNESLTRPGWTVGCNIQVK-IHQFKEGTARQS------ 57
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSL 125
+FVEL+DI G +K+ R + YS ++G+I VHDL+ + SL
Sbjct: 58 -QYFVELFDIGGSLSHKNTRGVFYSGVHGIILVHDLTNGKDTRSL 101
>gi|348679578|gb|EGZ19394.1| ras-like protein [Phytophthora sojae]
Length = 185
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 80/158 (50%), Gaps = 24/158 (15%)
Query: 19 TGQVRVLVVGDSGVGKTSLVNLIVKGSS-----FSRPSQ--TIGCTVGVKHITYGSSGSS 71
T VRVLVVGDSGVGKT+L+ I + S + R + T GC V V G SG
Sbjct: 3 TPSVRVLVVGDSGVGKTALLRSICRAHSPGDISYDRSASLWTTGCDVHVLLKPLGPSG-- 60
Query: 72 SNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE 131
R+ FVE D+ GH +Y+ R Y ++GVIFVHDLS ++ L+ W+ E
Sbjct: 61 ---------REVFVEFLDVGGHIKYELSRGAFYHDVHGVIFVHDLSNAKSGEHLRNWSRE 111
Query: 132 IATSGTFSAPL--ASGGPGGLP----VPYVVIGNKADV 163
+A + ++G +P +V+GNK D+
Sbjct: 112 LAGMQKLKGCVVPSTGKEHDFSTLHNLPKLVVGNKRDL 149
>gi|301093619|ref|XP_002997655.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262110045|gb|EEY68097.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 262
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 80/159 (50%), Gaps = 25/159 (15%)
Query: 19 TGQVRVLVVGDSGVGKTSLVNLIVKGSSFS-----RPSQ--TIGCTVGVKHITYGSSGSS 71
T VRVLV+G+SGVGKT+L+ I + S + +PS T GC V V + G +G
Sbjct: 3 TPSVRVLVLGESGVGKTALLRAICRLYSPTPLSNDKPSSLWTTGCDVHVLLTSLGPAG-- 60
Query: 72 SNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE 131
R+ FVE D+ GH +Y+ R Y I+GV+FVHDLS ++ L+ W+ E
Sbjct: 61 ---------REVFVEFLDVGGHRQYELSRGAFYHDIHGVVFVHDLSNAKSGERLRNWSRE 111
Query: 132 IATSGTFSAPLASGGPGGLP-------VPYVVIGNKADV 163
++ + P +P +VIGNK D+
Sbjct: 112 LSDLQRLKGCVVPTMTTKTPDFSTLHELPKLVIGNKKDL 150
>gi|346466451|gb|AEO33070.1| hypothetical protein [Amblyomma maculatum]
Length = 240
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 34/208 (16%)
Query: 31 GVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERDFFVELWDI 90
GVGK+S V+L+ T+GC+V VK Y +S ++ +FVELWDI
Sbjct: 30 GVGKSSAVHLLCHNRPLVNACWTVGCSVEVKLHEYREGTAS--------QKTYFVELWDI 81
Query: 91 SGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPLASGGPGGL 150
G + R++ Y+ +G+I VHDL+ +++ +L+KW E+ F S GL
Sbjct: 82 GGSSSHSSARAVFYNSFHGLILVHDLTNKKSHENLRKWLSEV-----FCKDCPSKKTNGL 136
Query: 151 -----------PVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLT 199
VP +V+ K D+ + R L A + Q LL ++ L
Sbjct: 137 LEFDQEMFADSQVPILVVATKVDLVPQTAGRA----LATVAEECGTDQVLLDNNNPKSLA 192
Query: 200 ESFPGGGGLIAAAKEARYDKEAVMKFFR 227
PG A K R+ + V + FR
Sbjct: 193 ---PGSSN---ALKVTRFLDKVVERRFR 214
>gi|351697680|gb|EHB00599.1| Rab-like protein 3, partial [Heterocephalus glaber]
Length = 221
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 42/228 (18%)
Query: 30 SGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERDFFVELWD 89
+GVGK+SLV+L+ + PS T+GC+V V+ Y E+ +++ELWD
Sbjct: 1 TGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPE--------EKTYYIELWD 52
Query: 90 ISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE-IATSGTFSAPLAS 144
+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E + + L +
Sbjct: 53 VGGSVGSASSVKSTRAVFYNSVNGIILVHDLTNKKSSQNLYRWSMEALNRDLVLTRVLVT 112
Query: 145 GGP------GGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLP---SSEE 195
G +P +VIG K D E R + + + L ++EE
Sbjct: 113 NGDYDREQFADNQMPLLVIGTKLD-QIHETKR----------HEVLTRTAFLAEDFNAEE 161
Query: 196 LPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYF---SDEMP 240
+ L + P L A + A + +FF +I +RYF S+++P
Sbjct: 162 INLDCTNP--RYLAAGSSNA----VKISRFFDKVIEKRYFLRDSNQIP 203
>gi|350597028|ref|XP_003361928.2| PREDICTED: rab-like protein 3-like [Sus scrofa]
Length = 230
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 28/155 (18%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
RVLV +GVGK+SLV+L+ + PS T+GC+V V+ Y E+
Sbjct: 3 RVLV-SFTGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPE--------EKT 53
Query: 83 FFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE------- 131
+++ELWD+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E
Sbjct: 54 YYIELWDVGGSVGSASSVKSTRAVFYNSVNGIILVHDLTNKKSSQNLYRWSLEALNRDLV 113
Query: 132 ----IATSGTFSAPLASGGPGGLPVPYVVIGNKAD 162
+ T+G + + +P +VIG K D
Sbjct: 114 PTGVLVTNGDYDREQFADN----QIPLLVIGTKLD 144
>gi|440889484|gb|ELR44644.1| Rab-like protein 3, partial [Bos grunniens mutus]
Length = 222
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 51/226 (22%)
Query: 30 SGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERDFFVELWD 89
+GVGK+SLV+L+ + PS T+GC+V V+ Y E+ +++ELWD
Sbjct: 1 TGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPE--------EKTYYIELWD 52
Query: 90 ISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE-----------IAT 134
+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E + T
Sbjct: 53 VGGSVGSASSVKSTRAVFYNSVNGIILVHDLTNKKSSQNLYRWSLEALNRDLVPTGVLVT 112
Query: 135 SGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLP--- 191
+G + + +P +VIG K D E R + + + L
Sbjct: 113 NGDYDREQFADN----QIPLLVIGTKLD-QIHENKR----------HEVLTRTAFLAEDF 157
Query: 192 SSEELPLTESFPG--GGGLIAAAKEARYDKEAVMKFFRMLIRRRYF 235
++EE+ L + P G A K +R FF +I +RYF
Sbjct: 158 NAEEINLDCTNPRYLAAGSSNAVKLSR--------FFDKVIEKRYF 195
>gi|444727050|gb|ELW67558.1| Rab-like protein 3 [Tupaia chinensis]
Length = 217
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 27/151 (17%)
Query: 27 VGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERDFFVE 86
V +GVGK+SLV+L+ + PS T+GC+V V+ Y E+ +++E
Sbjct: 6 VSFTGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPE--------EKTYYIE 57
Query: 87 LWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE----------- 131
LWDI G K R++ Y+ +NG+I VHDL+ +++ +L +W++E
Sbjct: 58 LWDIGGSVGSASSVKSTRAVFYNSVNGIILVHDLTNKKSSQNLYRWSLEALNRDLVPTGV 117
Query: 132 IATSGTFSAPLASGGPGGLPVPYVVIGNKAD 162
+ T+G + + +P +VIG K D
Sbjct: 118 LVTNGDYDREQFADN----QIPLLVIGTKLD 144
>gi|313215921|emb|CBY37329.1| unnamed protein product [Oikopleura dioica]
gi|313229151|emb|CBY23736.1| unnamed protein product [Oikopleura dioica]
Length = 221
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 80/150 (53%), Gaps = 22/150 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQ---TIGCTVGVKHITYGSSGSSSNSIKGD 78
V++LVVGDSGVGKT L +++ S + +Q TIG V + Y +G
Sbjct: 9 VKILVVGDSGVGKTHLSSILTDVSDSMKSAQCKWTIGANVEILIHKYK---------QGT 59
Query: 79 SERD-FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGT 137
E D +F ELWD+SG+ + RS+ ++ +GVIFVH+L+ R++ +++ W+ E+
Sbjct: 60 PEEDLYFCELWDVSGNLAHTTSRSVFFNNFHGVIFVHNLTNRKSLENIRGWSEEV----- 114
Query: 138 FSAPLASGGPGGLPVPYVVIGNKADVAAKE 167
L G VP +++G + + K+
Sbjct: 115 ----LDGDQESGANVPLILVGTRLNDVMKD 140
>gi|66934638|gb|AAY58910.1| ras-like protein [Hyaloperonospora parasitica]
Length = 207
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 80/166 (48%), Gaps = 28/166 (16%)
Query: 19 TGQVRVLVVGDSGVGKTSLVNLI------VKGSSFSRPSQ--TIGCTVGVKHITYGSSGS 70
T VRVLVVGDSGVGKT+L+ + V + +P T GC V V + G G
Sbjct: 18 TPSVRVLVVGDSGVGKTTLLRALCHSQSPVHSKALDKPPTVWTTGCDVHVLLKSLGPDG- 76
Query: 71 SSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAV 130
R+ FVE D+ GH +Y+ R Y ++GV+FVHDLS ++ L W+
Sbjct: 77 ----------REVFVEFLDVGGHRQYERSRRAFYVDVHGVMFVHDLSNVKSGDHLCHWSR 126
Query: 131 EIATSGTFS---APLASGGPGG------LPVPYVVIGNKADVAAKE 167
E++ PL SG +P +V+G+K D+ K+
Sbjct: 127 EMSMVQRLKGCVVPLRSGNGKKQDFSTLHELPKLVVGSKRDLVTKK 172
>gi|380799693|gb|AFE71722.1| rab-like protein 3, partial [Macaca mulatta]
Length = 219
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 95/221 (42%), Gaps = 41/221 (18%)
Query: 33 GKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERDFFVELWDISG 92
GK+SLV+L+ + PS T+GC+V V+ Y E+ +++ELWD+ G
Sbjct: 1 GKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPE--------EKTYYIELWDVGG 52
Query: 93 H----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE-----------IATSGT 137
K R++ Y+ +NG+IFVHDL+ +++ +L++W++E + T+G
Sbjct: 53 SVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRWSLEALNRDLVPTGVLVTNGD 112
Query: 138 FSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELP 197
+ + +P +VIG K D E R R + P L
Sbjct: 113 YDREQFADN----QIPLLVIGTKLD-QIHETKRHEV-----LTRTAFLAEDFNPEEINLD 162
Query: 198 LTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDE 238
T G A K +R FF +I +RYF E
Sbjct: 163 CTNPRYLAAGSSNAVKLSR--------FFDKVIEKRYFLRE 195
>gi|281342745|gb|EFB18329.1| hypothetical protein PANDA_015583 [Ailuropoda melanoleuca]
Length = 166
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 27/148 (18%)
Query: 30 SGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERDFFVELWD 89
+GVGK+SLV+L+ + PS T+GC+V V+ Y E+ +++ELWD
Sbjct: 1 TGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPE--------EKTYYIELWD 52
Query: 90 ISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE-----------IAT 134
+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E + T
Sbjct: 53 VGGSVGSASSVKSTRAVFYNSVNGIILVHDLTNKKSSQNLYRWSLEALNRDLVPTGVLVT 112
Query: 135 SGTFSAPLASGGPGGLPVPYVVIGNKAD 162
+G + + +P +VIG K D
Sbjct: 113 NGDYDREQFADN----QIPLLVIGTKLD 136
>gi|427783513|gb|JAA57208.1| Putative rab gtpase [Rhipicephalus pulchellus]
Length = 225
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 20/144 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+GD GVGKTSL+ +G TIG +KH+ Y + +
Sbjct: 27 KVLVIGDFGVGKTSLIRRYTEGVFNPAYKITIGVDFSLKHLVY------------NGNKH 74
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+GHER+ + Y + V+DLS+ T S+ KW ++
Sbjct: 75 ITLQLWDIAGHERFGYMTRVYYKYATAAVIVYDLSRPATLHSVLKWKADLTAKVEL---- 130
Query: 143 ASGGPGGLPVPYVVIGNKADVAAK 166
P G P+P +++ NK D+ ++
Sbjct: 131 ----PNGRPLPVLLVANKCDLGSQ 150
>gi|442749927|gb|JAA67123.1| Putative gtp-binding protein-like ras superfamily [Ixodes ricinus]
Length = 229
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 20/141 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVG+ GVGKTSL+ +G TIG +KHI Y D+++
Sbjct: 28 KVLVVGEFGVGKTSLIRRYTEGVFNQAYKITIGVDFSLKHIVY------------DNKKH 75
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+GHER+ + Y I V+DLS+ T S+ KW ++
Sbjct: 76 ITLQLWDIAGHERFGCMTRVYYKYATAAIVVYDLSRPTTLHSVLKWKADLTEK------- 128
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
G P+P V++ NK D+
Sbjct: 129 -VEQQNGHPIPVVLVANKCDL 148
>gi|256082917|ref|XP_002577698.1| activating signal cointegrator 1 complex subunit 3 helc1 [Schistosoma
mansoni]
Length = 2709
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 60/99 (60%), Gaps = 13/99 (13%)
Query: 34 KTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERDFFVELWDISGH 93
KT+LV+LI + PS TIGC+V +K + + SE +F+ELWDI G
Sbjct: 2310 KTALVHLICNRQTLLHPSYTIGCSVDIKVVEF-------------SEHPYFIELWDIGGS 2356
Query: 94 ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEI 132
+ +++ RSI Y ++G+I V+D + ++++ +L+KW ++
Sbjct: 2357 KSHENTRSIFYQNLHGLILVYDCTNKKSQLNLRKWLSDV 2395
>gi|410932839|ref|XP_003979800.1| PREDICTED: rab-like protein 3-like, partial [Takifugu rubripes]
Length = 217
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 45/222 (20%)
Query: 32 VGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERDFFVELWDIS 91
VGK+SLV+L+ + PS T+GC+V V+ Y E+ +++ELWD+
Sbjct: 1 VGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVQDYKEGTPE--------EKAYYIELWDVG 52
Query: 92 GH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE-IATSGTFSAPLASGG 146
G K R++ Y+ +NG+I VHDL+ +++ +L +W++E + + + + S G
Sbjct: 53 GSIGSASSVKSTRAVFYNSVNGIILVHDLTNKKSSQNLYRWSLEALNKDSSPTGVIVSNG 112
Query: 147 P------GGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPS----SEEL 196
PVP ++IG K D + + R V + S +EE+
Sbjct: 113 EYDREQFAENPVPLLLIGTKFD------------QIPETKRSEVLTRTAFLSEDFNAEEI 160
Query: 197 PLTESFPG--GGGLIAAAKEARYDKEAVMKFFRMLIRRRYFS 236
L + P G A K +R FF +I +RYF+
Sbjct: 161 NLDCTNPRYLAAGTSNAVKLSR--------FFDKVIEKRYFT 194
>gi|326912833|ref|XP_003202750.1| PREDICTED: rab-like protein 3-like [Meleagris gallopavo]
Length = 282
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 27/148 (18%)
Query: 30 SGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERDFFVELWD 89
+GVGK+SLV+L+ PS T+GC+V V+ Y E+ +++ELWD
Sbjct: 61 AGVGKSSLVHLLCHNQVLGNPSWTVGCSVDVRIHDYKEGTPE--------EKTYYIELWD 112
Query: 90 ISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE-----------IAT 134
+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E + T
Sbjct: 113 VGGSVGSATSVKSTRAVFYNSLNGIILVHDLTNKKSSQNLYRWSLEALNRDVAPTGVLVT 172
Query: 135 SGTFSAPLASGGPGGLPVPYVVIGNKAD 162
+G + + +P +VIG K D
Sbjct: 173 NGDYDREQFADN----QIPLLVIGTKLD 196
>gi|324530721|gb|ADY49105.1| Rab-like protein 3, partial [Ascaris suum]
Length = 204
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 78/152 (51%), Gaps = 18/152 (11%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+G SGVGK+S VN++ P+ T+GC V V Y +GS+ E+
Sbjct: 4 LKVVVLGSSGVGKSSFVNVVCNRVDV-FPNSTVGCAVSVIAHQY-RAGSAE-------EQ 54
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEI---ATSGTF 138
F+ELWDI G ++ ++ G I VHDLS +++TSL +W + +TS
Sbjct: 55 TEFIELWDIGGSTMHQKASAVFLEGAAGAILVHDLSNSKSETSLAQWVSLLRGDSTSTLT 114
Query: 139 SAPLAS------GGPGGLPVPYVVIGNKADVA 164
S P S P+P +V+G K D+A
Sbjct: 115 SMPSMSNLRPLLADIESTPIPTLVVGCKLDLA 146
>gi|449275808|gb|EMC84576.1| Rab-like protein 3, partial [Columba livia]
Length = 222
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 27/148 (18%)
Query: 30 SGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERDFFVELWD 89
+GVGK+SLV+L+ PS T+GC+V V+ Y E+ +++ELWD
Sbjct: 1 AGVGKSSLVHLLCHNQVLGNPSWTVGCSVDVRIHDYKEGTPE--------EKTYYIELWD 52
Query: 90 ISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE-----------IAT 134
+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E + T
Sbjct: 53 VGGSVGSATSVKSTRAVFYNLLNGIILVHDLTNKKSSQNLYRWSLEALNRDVAPTGVLVT 112
Query: 135 SGTFSAPLASGGPGGLPVPYVVIGNKAD 162
+G + + +P +VIG K D
Sbjct: 113 NGDYDREQFADN----QIPLLVIGTKLD 136
>gi|147819924|emb|CAN62813.1| hypothetical protein VITISV_031882 [Vitis vinifera]
Length = 205
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 104/224 (46%), Gaps = 33/224 (14%)
Query: 15 GGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNS 74
P ++V+V+GDSGVGKTSL+N V + + SQ T+G +T
Sbjct: 2 AAPRRTLLKVIVLGDSGVGKTSLMNQYV----YKKFSQQYKATIGADFVT--------KE 49
Query: 75 IKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIAT 134
++ D ++ ++LWD +G ER++ S Y + + V+D++ ++ SLQ W E
Sbjct: 50 LQID-DKLVTLQLWDTAGQERFQSLGSAFYRGADCCVLVYDVNVLKSFESLQSWHEEFLK 108
Query: 135 SGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDA--ARQWVEKQGLLPS 192
+ P P+VV+GNK DV G + +V AR+W +G +P
Sbjct: 109 QADPAEPEX--------FPFVVLGNKVDV------DGGNSRVVSERRAREWCASRGDIPY 154
Query: 193 SEELPLTESFPGGGGLIAAAK---EARYDKEAVMKFFRMLIRRR 233
E E F + A+ +++E +++ F+ L +++
Sbjct: 155 FET-SAKEDFNVDAAFLCVAQVGLSNEHEQENILEQFQKLFQKQ 197
>gi|328852304|gb|EGG01451.1| hypothetical protein MELLADRAFT_50103 [Melampsora larici-populina
98AG31]
Length = 228
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 22/202 (10%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKG---- 77
++V+++GDSGVGKTSL+N V ++ TIG K + S S+S +
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKRFSTQYKATIGADFLTKEVYIESEPSTSQQVTSQPQH 68
Query: 78 ----DSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIA 133
+S+R ++LWD +G ER++ Y + + V+D++ ++ +L W E
Sbjct: 69 QPNPNSDRVVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFL 128
Query: 134 TSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSS 193
+ P P+VV+GNK DV +EG R S A W + +G +P
Sbjct: 129 IQASPRDPDN--------FPFVVLGNKIDV--EEGKRQVSQK---RAMSWCQSKGNIPYF 175
Query: 194 EELPLTESFPGGGGLIAAAKEA 215
E ES +AA + A
Sbjct: 176 -ETSAKESINVEQSFVAACRNA 196
>gi|321475351|gb|EFX86314.1| hypothetical protein DAPPUDRAFT_187550 [Daphnia pulex]
Length = 216
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 72/141 (51%), Gaps = 25/141 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++V+GD G+GKTSLV G R + TIG +K I I+G +
Sbjct: 19 KIVVIGDCGIGKTSLVQRFKSGVFTERYTNTIGVDFAMKTIV----------IEGKQVK- 67
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y NGV+ V+D+++R + SLQKW EI F+A
Sbjct: 68 --LQIWDTAGQERFRTITQSYYRSANGVLLVYDITKRSSFLSLQKWMEEIR---RFTAN- 121
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
+ +V+IGNK D+
Sbjct: 122 --------NISWVLIGNKCDM 134
>gi|340055494|emb|CCC49813.1| putative small GTP-binding protein Rab18 [Trypanosoma vivax Y486]
Length = 222
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 77/149 (51%), Gaps = 12/149 (8%)
Query: 20 GQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDS 79
G V+VL++GDSGVGK+SL+ G+ + T+G VK +T + +I
Sbjct: 7 GSVKVLLLGDSGVGKSSLMLSFTCGTFDTDIRTTVGVDFRVKTVTVADLDGTRRTIN--- 63
Query: 80 ERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFS 139
+ LWD +G ER++ S Y + V+ V+D+S+ +T LQ+W I + F
Sbjct: 64 -----LHLWDTAGQERFRTLTSSYYRGAHAVVLVYDVSEPQTFHGLQRW---IDEADKFC 115
Query: 140 APLASGGPGGLPVPYVVIGNKADVAAKEG 168
P+ S V Y++IGNK D+ + +G
Sbjct: 116 RPVGSDEDDSGAV-YLLIGNKTDMCSGDG 143
>gi|263173324|gb|ACY69912.1| putative small GTPase [Cimex lectularius]
Length = 191
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 21/169 (12%)
Query: 80 ERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFS 139
++ +F+ELWD+ G ++ R+ Y+ ++G+IFVHDL+ R+++ +L+ W E+ ++
Sbjct: 15 QKTYFIELWDVGGSSNHRKTRTTFYNGVHGLIFVHDLTNRKSQQNLKCWLSEVVNRYSYK 74
Query: 140 APL------ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSS 193
A + G +P + IG K D+A ++ +G+ L D A++W + L +
Sbjct: 75 AKQGFEEYDSEQCAGSNMLPMIFIGTKLDLAGEKRVQGNMMGL-DIAQEWGADKINLDNM 133
Query: 194 EELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAP 242
+ L PG +A K +R FF +I RY E +P
Sbjct: 134 DPRSLA---PGSS---SAVKLSR--------FFNKVIEMRYHKREHVSP 168
>gi|225438533|ref|XP_002279477.1| PREDICTED: ras-related protein Rab7 [Vitis vinifera]
gi|296082518|emb|CBI21523.3| unnamed protein product [Vitis vinifera]
Length = 205
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 30/217 (13%)
Query: 15 GGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNS 74
P ++V+V+GDSGVGKTSL+N V + + SQ T+G +T
Sbjct: 2 AAPRRTLLKVIVLGDSGVGKTSLMNQYV----YKKFSQQYKATIGADFVT--------KE 49
Query: 75 IKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIAT 134
++ D ++ ++LWD +G ER++ S Y + + V+D++ ++ SLQ W E
Sbjct: 50 LQID-DKLVTLQLWDTAGQERFQSLGSAFYRGADCCVLVYDVNVLKSFESLQSWHEEFLK 108
Query: 135 SGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDA--ARQWVEKQGLLPS 192
+ P P+VV+GNK DV G + +V AR+W +G +P
Sbjct: 109 QADPAEPEV--------FPFVVLGNKVDV------DGGNSRVVSERRAREWCASRGDIPY 154
Query: 193 SEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRML 229
E E F + A+ ++ +FR +
Sbjct: 155 F-ETSAKEDFNVDAAFLCVARVGLSNEHGQENYFRAI 190
>gi|452820386|gb|EME27429.1| Rab family, other [Galdieria sulphuraria]
Length = 206
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 27/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+ V R SQ T+G +T + D +R
Sbjct: 12 LKVVVLGDSGVGKTSLLERFVN----RRFSQQYKATIGADFLT--------KDMFVD-DR 58
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+ +++WD +G ERY+ S Y + + V+D++ ++ SL+ W E S + S P
Sbjct: 59 NVNLQIWDTAGQERYQSLGSAFYRGADACVLVYDITDVKSFESLETWRDEFLVSASPSDP 118
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P++V+GNK+D+ EG R A+QW +G +P E
Sbjct: 119 --------QHFPFIVLGNKSDL---EGQRSVPSR---RAQQWCVSKGDIPYFE 157
>gi|229595003|ref|XP_001032971.3| Ras family protein [Tetrahymena thermophila]
gi|6682935|dbj|BAA88954.1| Rab7 [Tetrahymena thermophila]
gi|225566446|gb|EAR85308.3| Ras family protein [Tetrahymena thermophila SB210]
Length = 209
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 27/172 (15%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GDSGVGKTSL+N V + T+G K +T +R
Sbjct: 11 KIIILGDSGVGKTSLMNQYVNQRFTQQYRATVGADFMAKEVTI-------------DDRM 57
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y + + V+D++ ++T +L+ W E G P
Sbjct: 58 VTLQIWDTAGQERFQSLGGAFYRGADCCVLVYDITNKKTFENLESWKEEFKQQGCPKDPD 117
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VVIGNK+D A++ + A+QW + G + E
Sbjct: 118 T--------FPFVVIGNKSDKASERKVE------TEFAQQWCKSNGDIKHFE 155
>gi|390358987|ref|XP_003729379.1| PREDICTED: ras-related protein Rab-9A-like [Strongylocentrotus
purpuratus]
Length = 207
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 26/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GD GVGK+SL+N V TIG K I ++G++
Sbjct: 9 LKVVILGDGGVGKSSLMNRFVSNKFEQESFHTIGVEFLNKDIV----------VEGET-- 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F V++WD +G ER+K R+ Y + + + + R++ +L W E + A
Sbjct: 57 -FTVQIWDTAGQERFKSLRTPFYRGSDCCMLTYGVDDRQSFHNLTMWKKEF----LYYAD 111
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
+A G P+V++GNK DV + + G VD A+QW G +P E
Sbjct: 112 IADGE----NFPFVLLGNKVDVESDKRQVG-----VDEAKQWCADNGNVPYYE 155
>gi|356512758|ref|XP_003525083.1| PREDICTED: ras-related protein Rab7-like [Glycine max]
Length = 207
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 26/206 (12%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++++V+GDSGVGKTSL+N V + + SQ T+G +T I+ D ++
Sbjct: 11 LKIIVLGDSGVGKTSLMNQYV----YRKFSQQYKATIGADFVT--------KEIQVD-DK 57
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER+ + Y + + V+D++ +T +L W E G + P
Sbjct: 58 LVTLQIWDTAGQERFHSIGAAFYRGADCCVLVYDVNIHKTFDTLNNWHDEFLKQGDMNDP 117
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
A P+V++GNK DV R + AR W +G +P E E
Sbjct: 118 EA--------FPFVLLGNKVDVDGGNSRRVTEKK----ARDWCASRGNIPYF-ETSAKEG 164
Query: 202 FPGGGGLIAAAKEARYDKEAVMKFFR 227
+ + AK A ++ +FR
Sbjct: 165 YNVEEAFLCVAKIALENEHDQDIYFR 190
>gi|225707086|gb|ACO09389.1| Ras-related protein Rab-27A [Osmerus mordax]
Length = 220
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 20/168 (11%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++ L +GDSGVGKTS + G S+ T+G K + Y SSG S +G +
Sbjct: 10 IKFLALGDSGVGKTSFLYQYTDGKFNSKFITTVGIDFREKRVMYKSSGPDGTSARG---Q 66
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
V+LWD +G ER++ + + G + + DL+ ++ +++ W ++ +P
Sbjct: 67 RIHVQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTSEQSFLNVRNWMSQLQMHAYCESP 126
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGL 189
V+ GNK+D+ + R D AR+ EK G+
Sbjct: 127 -----------DIVLCGNKSDLGEQRAVRE------DEARELAEKYGI 157
>gi|623590|gb|AAA74119.1| putative [Nicotiana tabacum]
Length = 205
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 29/179 (16%)
Query: 18 PTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKG 77
P ++V+++GDSGVGKTSL+N V ++ TIG K + +
Sbjct: 4 PANVLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF------------ 51
Query: 78 DSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGT 137
+R F +++WD +G ER++ Y + + V+D++ ++ +L W E +
Sbjct: 52 -EDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQAS 110
Query: 138 FSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD--AARQWVEKQGLLPSSE 194
S P P+VV+GNK D+ G + +V AR W +G +P E
Sbjct: 111 PSDP--------ENFPFVVLGNKVDI------DGGNSRVVSEKKARAWCASKGNIPYFE 155
>gi|224059082|ref|XP_002299707.1| predicted protein [Populus trichocarpa]
gi|222846965|gb|EEE84512.1| predicted protein [Populus trichocarpa]
Length = 207
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 86/210 (40%), Gaps = 46/210 (21%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVHF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + VHD++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVHDVNVMKSFENLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEG----------------------TRGSSGNLVDA 179
P+VV+GNK DV T G VDA
Sbjct: 116 --------ENFPFVVLGNKIDVDGGNSRVVSEKKAKAWCAAKGNIPYFETSAKEGFNVDA 167
Query: 180 ARQWVEKQGLLPSSEE---LPLTESFPGGG 206
A Q + K L EE LP T GGG
Sbjct: 168 AFQCIAKNALKNEPEEEIYLPDTIDVAGGG 197
>gi|301122745|ref|XP_002909099.1| Rab32 family GTPase, putative [Phytophthora infestans T30-4]
gi|262099861|gb|EEY57913.1| Rab32 family GTPase, putative [Phytophthora infestans T30-4]
Length = 218
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 21/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++VLV+GD+ GKTS++ V + TIG +K +T + G + R
Sbjct: 14 IKVLVLGDAATGKTSIIKRYVHDAFSEHHRTTIGVDFALKAVT----------VSGTTVR 63
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWDI+G E ++ + Y G + V+D+S+ T S+ KW EI +
Sbjct: 64 ---LQLWDIAGQEHFRALNRVYYKDALGALLVYDMSRPETFDSIMKWKKEIDSKVEL--- 117
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
P G P+P ++ GNK D+
Sbjct: 118 -----PNGKPLPVILCGNKCDL 134
>gi|356538781|ref|XP_003537879.1| PREDICTED: ras-related protein Rab7-like isoform 1 [Glycine max]
gi|356538783|ref|XP_003537880.1| PREDICTED: ras-related protein Rab7-like isoform 2 [Glycine max]
Length = 206
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 34/188 (18%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD--AARQWVEKQGLLP-----SSE 194
P+VVIGNK D+ G + +V AR W +G +P + E
Sbjct: 116 --------ENFPFVVIGNKIDI------DGGNSRVVSEKKARAWCASKGNIPYFETSAKE 161
Query: 195 ELPLTESF 202
L + E+F
Sbjct: 162 GLNVEEAF 169
>gi|15222098|ref|NP_175355.1| RAB GTPase homolog G3E [Arabidopsis thaliana]
gi|79319588|ref|NP_001031161.1| RAB GTPase homolog G3E [Arabidopsis thaliana]
gi|75215673|sp|Q9XI98.1|RAG3E_ARATH RecName: Full=Ras-related protein RABG3e; Short=AtRABG3e; AltName:
Full=Ras-related protein Rab74; Short=AtRab74
gi|5430767|gb|AAD43167.1|AC007504_22 Putative RAB7 GTP-binding Protein [Arabidopsis thaliana]
gi|15718414|dbj|BAB68374.1| AtRab74 [Arabidopsis thaliana]
gi|28416619|gb|AAO42840.1| At1g49300 [Arabidopsis thaliana]
gi|110743311|dbj|BAE99544.1| hypothetical protein [Arabidopsis thaliana]
gi|332194293|gb|AEE32414.1| RAB GTPase homolog G3E [Arabidopsis thaliana]
gi|332194294|gb|AEE32415.1| RAB GTPase homolog G3E [Arabidopsis thaliana]
Length = 206
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFEDLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD--AARQWVEKQGLLPSSE 194
P+VVIGNK DV G S +V AR W +G +P E
Sbjct: 116 --------ENFPFVVIGNKIDV------DGGSSRVVSEKKARAWCASKGNIPYYE 156
>gi|290992771|ref|XP_002679007.1| ran family small GTPase [Naegleria gruberi]
gi|284092622|gb|EFC46263.1| ran family small GTPase [Naegleria gruberi]
Length = 193
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 14/141 (9%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+V+V+GDS VGKTSL+N +V G+ T+G + V+ +T I G ++
Sbjct: 8 KVIVIGDSSVGKTSLLNKMVSGTFTDSFMPTVGVDLKVRFLT----------IDG---KN 54
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ERY++ Y +G+I V+D++Q +T +L W E+
Sbjct: 55 IKLQIWDTAGQERYRNLTKSYYRGSDGIILVYDITQEKTFNNLSIWLNEVK-KNILGVNN 113
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
P G + +IGNK D+
Sbjct: 114 GDALPIGADLNIFIIGNKTDL 134
>gi|156403879|ref|XP_001640135.1| predicted protein [Nematostella vectensis]
gi|156227268|gb|EDO48072.1| predicted protein [Nematostella vectensis]
Length = 165
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 20/144 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VL+VGD+ VGKTS V V G++ TIG +K I + +
Sbjct: 7 KVLIVGDATVGKTSFVQRYVHGNTRREYKPTIGVDFALKVIPWAQDATVR---------- 56
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + DL+ ++T S KW ++ +
Sbjct: 57 --LQLWDIAGQERFTSMTRVYYKGAAACVIMFDLTSQQTFNSTIKWKNDLDSKCKL---- 110
Query: 143 ASGGPGGLPVPYVVIGNKADVAAK 166
P G P+P +++GNK+D++A+
Sbjct: 111 ----PNGKPIPCILVGNKSDLSAR 130
>gi|348675957|gb|EGZ15775.1| hypothetical protein PHYSODRAFT_561505 [Phytophthora sojae]
Length = 218
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 22/150 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++VLV+GD+ GKTS++ V + TIG +K +T + G + R
Sbjct: 14 IKVLVLGDAATGKTSIIKRYVHDAFSEHHRTTIGVDFALKAVT----------VNGTTVR 63
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWDI+G E ++ + Y G + V+D+S+ T S+ KW EI +
Sbjct: 64 ---LQLWDIAGQEHFRALNRVYYKDALGALLVYDMSRPETFDSILKWKKEIDSKVEL--- 117
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRG 171
P G P+P ++ GNK D+ +E RG
Sbjct: 118 -----PNGKPLPVILCGNKCDL-KEEVDRG 141
>gi|307106915|gb|EFN55159.1| hypothetical protein CHLNCDRAFT_35566 [Chlorella variabilis]
Length = 207
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 30/186 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V S+ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSSQYKATIGADFLTKEVQV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ +T +L+ W E + S P
Sbjct: 56 LVTMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSSKTFDNLENWRDEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLP-----SSEEL 196
P+VV+GNK DV + + S A+QW +G +P + E+L
Sbjct: 116 --------DNFPFVVLGNKVDVEGGKARQVSEKK----AKQWCGAKGGIPHFDTSAKEDL 163
Query: 197 PLTESF 202
+ ++F
Sbjct: 164 NVDDAF 169
>gi|328768581|gb|EGF78627.1| hypothetical protein BATDEDRAFT_90381 [Batrachochytrium
dendrobatidis JAM81]
Length = 341
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 69/129 (53%), Gaps = 19/129 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSR----PSQTIGCTVGVKHITYGSSGSSSNSIKG 77
VR+ +VGDSGVGKTSL NLI GS + P+ T GCT+ VK T+ S S
Sbjct: 14 VRIAIVGDSGVGKTSLANLICTGSPLLQSGRPPTTTRGCTLSVK--THNPSTLHS----- 66
Query: 78 DSERDFFVELWDISGHERYKDC--RSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATS 135
VEL DI+G R +C R YS I+G+I VHD+ + T +SL W E S
Sbjct: 67 ----PVTVELVDIAG--RSNNCLSRRPFYSGIHGLILVHDVRLQSTLSSLHSWRNEALES 120
Query: 136 GTFSAPLAS 144
+ P++S
Sbjct: 121 LSTLCPVSS 129
>gi|297815516|ref|XP_002875641.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321479|gb|EFH51900.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 123
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 8/80 (10%)
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
L+SGGPG LP+ Y+VIGNKAD+A K+GT GSSGNLVD V P + L+E+
Sbjct: 36 LSSGGPGFLPITYIVIGNKADIAEKDGTSGSSGNLVDGLTSMV----CFPIVMDF-LSEN 90
Query: 202 FPGGGGLIAAAKEARYDKEA 221
FP GGLI E R+++ A
Sbjct: 91 FPCNGGLIM---EQRFNEMA 107
>gi|388497440|gb|AFK36786.1| unknown [Medicago truncatula]
Length = 209
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 26/206 (12%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + + SQ T+G +T + D ++
Sbjct: 13 LKVIVLGDSGVGKTSLMNQYV----YKKFSQQYKATIGADFVT--------KELLVD-DK 59
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER+ + Y + + V+D++ +T +L W F
Sbjct: 60 LVTLQIWDTAGQERFHSLGAAFYRGADCCVLVYDVNIHKTFDTLNNW------HDDFLKQ 113
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
+G P P+V++GNK DV R + AR+W +G +P E E
Sbjct: 114 ADTGNPDAF--PFVLLGNKVDVDGGNSRRVTEKK----AREWCASRGSIPYFET-SAKEG 166
Query: 202 FPGGGGLIAAAKEARYDKEAVMKFFR 227
+ + AK A + + +FR
Sbjct: 167 YNVDDAFLCVAKVASENDHDLDIYFR 192
>gi|357519661|ref|XP_003630119.1| Ras-related protein Rab7 [Medicago truncatula]
gi|355524141|gb|AET04595.1| Ras-related protein Rab7 [Medicago truncatula]
Length = 209
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 26/206 (12%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + + SQ T+G +T + D ++
Sbjct: 13 LKVIVLGDSGVGKTSLMNQYV----YKKFSQQYKATIGADFVT--------KELLVD-DK 59
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER+ + Y + + V+D++ +T +L W F
Sbjct: 60 LVTLQIWDTAGQERFHSLGAAFYRGADCCVLVYDVNIHKTFDTLNNW------HDDFLKQ 113
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
+G P P+V++GNK DV R + AR+W +G +P E E
Sbjct: 114 ADTGNPDAF--PFVLLGNKVDVDGGNSRRVTEKK----AREWCASRGSIPYFET-SAKEG 166
Query: 202 FPGGGGLIAAAKEARYDKEAVMKFFR 227
+ + AK A + + +FR
Sbjct: 167 YNVDDAFLCVAKVASENDHDLDIYFR 192
>gi|340501803|gb|EGR28543.1| rab gtpase, putative [Ichthyophthirius multifiliis]
Length = 209
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 27/182 (14%)
Query: 13 LNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSS 72
+N +++++GDSGVGKTSL+N V + T+G K +
Sbjct: 1 MNNTKRKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMI------- 53
Query: 73 NSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEI 132
+R +++WD +G ER++ Y + + V+D++ +++ SL+ W E
Sbjct: 54 ------DDRMVTLQIWDTAGQERFQSLGGAFYRGADCCVLVYDITNKKSFESLESWKEEF 107
Query: 133 ATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPS 192
G P P+VV+GNK D A++ D A QW + G L +
Sbjct: 108 KQQGQPKDP--------DNFPFVVLGNKCDRASERKVES------DFASQWCKSHGDLLN 153
Query: 193 SE 194
E
Sbjct: 154 FE 155
>gi|3914550|sp|O24461.1|RAB7_PRUAR RecName: Full=Ras-related protein Rab7
gi|2317874|gb|AAB71504.1| Rab7 GTP binding protein [Prunus armeniaca]
Length = 207
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 88/210 (41%), Gaps = 46/210 (21%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E T S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNNWREEFLIQATPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADV----------------AAKEG------TRGSSGNLVDA 179
P+VV+GNK DV A +G T G VD
Sbjct: 116 --------ENFPFVVLGNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDD 167
Query: 180 ARQWVEKQGLLPSSEE---LPLTESFPGGG 206
A Q + K L EE LP T GGG
Sbjct: 168 AFQCIAKNALNNEPEEEIYLPDTIDVAGGG 197
>gi|351726788|ref|NP_001238418.1| uncharacterized protein LOC100305642 [Glycine max]
gi|255626165|gb|ACU13427.1| unknown [Glycine max]
Length = 206
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD--AARQWVEKQGLLPSSE 194
P+VVIGNK D+ G + +V AR W +G +P E
Sbjct: 116 --------ENFPFVVIGNKIDI------DGGNSRVVSEKKARAWCASKGNIPYFE 156
>gi|363807114|ref|NP_001242593.1| uncharacterized protein LOC100787120 [Glycine max]
gi|255645135|gb|ACU23066.1| unknown [Glycine max]
gi|255645145|gb|ACU23071.1| unknown [Glycine max]
Length = 207
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 25/173 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++++V+GDSGVGKTSL+N V + + SQ T+G +T I+ D ++
Sbjct: 11 LKIIVLGDSGVGKTSLMNQYV----YRKFSQQYKATIGADFVT--------KEIQVD-DK 57
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER+ + Y + + V+D++ +T +L W E G + P
Sbjct: 58 LVTLQIWDTAGQERFHSLGAAFYRGADCCVLVYDVNIHKTFDTLNNWHDEFLKQGDMNDP 117
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
A P+V++GNK DV R + AR W G +P E
Sbjct: 118 EA--------FPFVLLGNKVDVDGGNSRRVTEKK----ARDWCTSGGNIPYFE 158
>gi|408784807|gb|AFU91386.1| small GTP binding protein [Arachis hypogaea]
Length = 206
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD--AARQWVEKQGLLPSSE 194
P+VVIGNK D+ G + +V AR W +G +P E
Sbjct: 116 --------ENFPFVVIGNKVDI------DGGNSRVVSEKKARAWCASKGNIPYFE 156
>gi|126306731|ref|XP_001365593.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Monodelphis
domestica]
Length = 204
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 74/148 (50%), Gaps = 20/148 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + SFSR ++ TVGV S S ++
Sbjct: 9 KVLVVGDAAVGKTSLVQRYCQ-DSFSRHYKS---TVGVDFALKVLQWSDSEMVR------ 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ QKW ++ T
Sbjct: 59 --LQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNCQKWKQDLDCKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTR 170
P G PVP +++ NK+D++ TR
Sbjct: 113 ----PSGEPVPCLLLANKSDLSPWAMTR 136
>gi|298709911|emb|CBJ31636.1| Rab32C, RAB family GTPase [Ectocarpus siliculosus]
Length = 243
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 19/145 (13%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFS---RPSQTIGCTVGVKHITYGSSGSSSNSIKGD 78
+++LVVGD+GVGKTS++ V FS RP TIG +K + +G S S G
Sbjct: 11 IKILVVGDAGVGKTSVIQRFVN-DEFSPTHRP--TIGVDFFIKEVAL--NGDQSESFPGT 65
Query: 79 SERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTF 138
+ R V+LWDI+G +R + + G + V+D+S+ +T S KW E+ + T
Sbjct: 66 TVR---VQLWDIAGQDRARKMNRAYFKGALGALVVYDISRPQTFDSAAKWKQELDANITL 122
Query: 139 SAPLASGGPGGLPVPYVVIGNKADV 163
P G +P V++GNK D+
Sbjct: 123 --------PNGSSLPVVLLGNKVDL 139
>gi|449465391|ref|XP_004150411.1| PREDICTED: ras-related protein Rab7-like [Cucumis sativus]
gi|449508065|ref|XP_004163207.1| PREDICTED: ras-related protein Rab7-like [Cucumis sativus]
gi|34484308|gb|AAQ72787.1| putative GTP-binding protein [Cucumis sativus]
Length = 206
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD--AARQWVEKQGLLPSSE 194
P+VV+GNK DV G + +V AR W +G +P E
Sbjct: 116 --------ENFPFVVLGNKVDV------DGGNSRVVSEKKARAWCASKGNIPYFE 156
>gi|357473205|ref|XP_003606887.1| Ras-related protein Rab7 [Medicago truncatula]
gi|355507942|gb|AES89084.1| Ras-related protein Rab7 [Medicago truncatula]
Length = 206
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQANPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
P+VVIGNK D+ G + +V AR W +G +P E
Sbjct: 116 --------ENFPFVVIGNKIDI------DGGNSRVVSEKKARAWCAAKGNIPYFE 156
>gi|7388049|sp|Q9XER8.1|RAB7_GOSHI RecName: Full=Ras-related protein Rab7
gi|4545231|gb|AAD22451.1|AF116243_1 RAS-related GTP-binding protein [Gossypium hirsutum]
Length = 207
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQF-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + VHD++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVHDVNVMKSFDNLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
P+VV+GNK DV G + +V A+ W +G +P E
Sbjct: 116 --------ENFPFVVLGNKVDV------DGGNSRVVSEKKAKAWCASKGNIPYFE 156
>gi|224103431|ref|XP_002313053.1| predicted protein [Populus trichocarpa]
gi|118485510|gb|ABK94609.1| unknown [Populus trichocarpa]
gi|222849461|gb|EEE87008.1| predicted protein [Populus trichocarpa]
Length = 206
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
P+VV+GNK DV G + +V AR W +G +P E
Sbjct: 116 --------ENFPFVVLGNKVDV------DGGNSRVVSEKKARAWCASKGNIPYFE 156
>gi|290986392|ref|XP_002675908.1| rab family small GTPase [Naegleria gruberi]
gi|284089507|gb|EFC43164.1| rab family small GTPase [Naegleria gruberi]
Length = 189
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 31/168 (18%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+V+V+GDSGVGK++L+ K ++P TIG K I+Y + +IKG
Sbjct: 9 KVVVLGDSGVGKSNLIIRFTKNIFNTQPKPTIGVEFASKSISYDGA-----TIKG----- 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++WD +G ER+ + +G + V+D++ + + L+KW EI+ G
Sbjct: 59 ---QIWDTAGQERFHAVSVQYHRGAHGALMVYDITNKESFEHLEKWFNEISKQGE----- 110
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLL 190
G + Y+VIGNK D+A + G + + EK+ LL
Sbjct: 111 ----EGCI---YIVIGNKCDLAGQRQVTEEEGKI------FAEKRNLL 145
>gi|297741446|emb|CBI32577.3| unnamed protein product [Vitis vinifera]
Length = 253
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 27/174 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 56 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 102
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 103 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDP 162
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD-AARQWVEKQGLLPSSE 194
P+VV+GNK DV G+S + D AR W +G +P E
Sbjct: 163 --------ENFPFVVLGNKVDVDG-----GNSRVVSDKKARAWCASKGNIPYFE 203
>gi|77745448|gb|ABB02623.1| unknown [Solanum tuberosum]
gi|78191474|gb|ABB29958.1| unknown [Solanum tuberosum]
Length = 206
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
P+VV+GNK DV G + +V AR W +G +P E
Sbjct: 116 --------ENFPFVVLGNKVDV------DGGNSRVVSEKKARAWCASKGNIPYFE 156
>gi|217071054|gb|ACJ83887.1| unknown [Medicago truncatula]
gi|388493264|gb|AFK34698.1| unknown [Medicago truncatula]
Length = 206
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVDKKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQANPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
P+VVIGNK D+ G + +V AR W +G +P E
Sbjct: 116 --------ENFPFVVIGNKIDI------DGGNSRVVSEKKARAWCAAKGNIPYFE 156
>gi|156390266|ref|XP_001635192.1| predicted protein [Nematostella vectensis]
gi|156222283|gb|EDO43129.1| predicted protein [Nematostella vectensis]
Length = 204
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 47/210 (22%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGK+ L+ V S TIG +K + + G +
Sbjct: 18 KILLIGDSGVGKSCLLLRFVDDSHRESYQTTIGVDFKIK----------TMRVDGKVVK- 66
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ S Y +GV+ V+D+++R + +L KW +E+ T
Sbjct: 67 --LQIWDTAGQERFRTITSSYYRGAHGVMIVYDITKRESYNNLHKWLMEVET-------Y 117
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTESF 202
AS G V +++GNK D+ + DAA++W + ++P E+
Sbjct: 118 ASEG-----VHMILVGNKIDLDTDREVQP------DAAQEW-------AALHDMPFVET- 158
Query: 203 PGGGGLIAAAKEARYDKEAVMKFFRMLIRR 232
+AK A+ KEA + R+L +
Sbjct: 159 --------SAKGAKNVKEAFLVLSRLLTKH 180
>gi|308456500|ref|XP_003090686.1| hypothetical protein CRE_20091 [Caenorhabditis remanei]
gi|308261152|gb|EFP05105.1| hypothetical protein CRE_20091 [Caenorhabditis remanei]
Length = 240
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 73/155 (47%), Gaps = 20/155 (12%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GDS VGKTSL + I + PS+T T+G I + +R
Sbjct: 10 KILVLGDSCVGKTSLCHCIA-----AEPSRTFDSTIGATVIMAWHEYRAGTP----EQRS 60
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+ELWDI G ++ + + G I VHDL+ RR++ +L W + G AP
Sbjct: 61 ELLELWDIGGMVVHRQAAQVFFEGAVGAILVHDLTNRRSEENLATWLTML--DGKPRAPK 118
Query: 143 ASGGPGGLP---------VPYVVIGNKADVAAKEG 168
+S P + +P +++G KAD+ +G
Sbjct: 119 SSKDPAAVALKVDIESCNIPVLIVGTKADLVPHKG 153
>gi|440803967|gb|ELR24850.1| Rab32 protein, putative [Acanthamoeba castellanii str. Neff]
Length = 216
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 20/141 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD GKT+++ V+G+ TIG +K I +GS N++
Sbjct: 19 KVLVVGDMATGKTAIIRRCVEGAFSDNYKTTIGVDFALKTIKWGS-----NTL------- 66
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++LWDI+G ERY + + Y + V DL++ + S+++W +I
Sbjct: 67 VYLQLWDIAGQERYGNLTRVYYKEAVAAFVVFDLTRNSSFESVKRWKDDIDNKVRL---- 122
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
P G P+P +++ NK D+
Sbjct: 123 ----PNGDPLPVILLANKCDM 139
>gi|117939061|dbj|BAF36684.1| Small G Protein RAB [Dinenympha exilis]
Length = 187
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 74/142 (52%), Gaps = 18/142 (12%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++VLVVGD GVGKTSL+ V + FSR + T+GV Y + + + G
Sbjct: 2 LKVLVVGDLGVGKTSLIQRYVH-NIFSREYKA---TIGVD-FAYKLIPIAEDKVVG---- 52
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWDI+G ERY + + Y + G I V DLS+ T S++KW +I + P
Sbjct: 53 ---LQLWDIAGQERYGNMTRVYYREAFGAIIVFDLSRPGTLDSVRKWKADIDSKVRLPDP 109
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
S P+P V++ NK D+
Sbjct: 110 DES------PIPVVLMANKCDL 125
>gi|432896162|ref|XP_004076289.1| PREDICTED: ras-related protein Rab-32-like [Oryzias latipes]
Length = 207
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 94/200 (47%), Gaps = 41/200 (20%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+GD GVGKTS I+K SQ T+GV + ++ D++R
Sbjct: 9 KVLVIGDLGVGKTS----IIKRYVHQIFSQHYRATIGVDFVL--------KVLQWDNDRV 56
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ERY + + Y + G + V D+++ T ++ KW ++ + T S
Sbjct: 57 VRLQLWDIAGQERYGNMTRVYYREAVGALVVFDVTRASTFDAVLKWKDDLDSKVTLS--- 113
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKE--------------GTRGSSG----NLVDAARQWV 184
G PVP V++ NK+D A + G G+S N+ +AAR V
Sbjct: 114 -----HGRPVPAVLLANKSDQMASQVPKLDSFCRENGFVGWFGTSAKDNTNIEEAARCLV 168
Query: 185 EKQGLLPSSEELPLTESFPG 204
E + ++EE P E G
Sbjct: 169 EH---ILTNEESPAAERESG 185
>gi|388507798|gb|AFK41965.1| unknown [Lotus japonicus]
Length = 206
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
P+VVIGNK D+ G + +V AR W +G +P E
Sbjct: 116 --------ENFPFVVIGNKIDI------DGGNSRVVSEKKARAWCASKGNIPYFE 156
>gi|388509354|gb|AFK42743.1| unknown [Lotus japonicus]
Length = 206
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD--AARQWVEKQGLLPSSE 194
P+VVIGNK D+ G + +V AR W +G +P E
Sbjct: 116 --------ENFPFVVIGNKIDI------DGGNSRVVSEKKARAWCASKGNIPYFE 156
>gi|449664228|ref|XP_002169364.2| PREDICTED: uncharacterized protein LOC100206038 [Hydra
magnipapillata]
Length = 446
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 19/159 (11%)
Query: 18 PTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKG 77
P +++L +GDSGVGKTS V ++G+ + TIG + K +TY
Sbjct: 13 PDAVLKLLTLGDSGVGKTSFVLQFIEGTFTEKFVPTIGMDLREKLMTYQDHFKE------ 66
Query: 78 DSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGT 137
ER ++E+WD +G ER++ + + G + + D+S++ T +++ W ++
Sbjct: 67 --ERKVYLEIWDTAGQERFRSLTTAFFRDAMGFLLIFDISRKDTFVNVRSWLSQLQLHSN 124
Query: 138 FSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNL 176
P V+IGNK D+ +E S+ L
Sbjct: 125 CDDP-----------AMVLIGNKNDLDIREVDENSAIQL 152
>gi|359475302|ref|XP_003631644.1| PREDICTED: ras-related protein Rab7-like [Vitis vinifera]
gi|147783576|emb|CAN61313.1| hypothetical protein VITISV_013388 [Vitis vinifera]
Length = 206
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 27/174 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD-AARQWVEKQGLLPSSE 194
P+VV+GNK DV G+S + D AR W +G +P E
Sbjct: 116 --------ENFPFVVLGNKVDVDG-----GNSRVVSDKKARAWCASKGNIPYFE 156
>gi|440298528|gb|ELP91160.1| hypothetical protein EIN_480990 [Entamoeba invadens IP1]
Length = 198
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 76/145 (52%), Gaps = 24/145 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++VL++G+SGVGK+++ + + K S + TIG K+I +N++K
Sbjct: 8 LKVLLLGESGVGKSAICHRLCKDSFTDIYTSTIGVEYAPKYIDL-----ENNTLK----- 57
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
V+LWD +G ER+K+ Y NGVI V D++QR + + +W ++
Sbjct: 58 ---VQLWDSAGQERFKNITRCYYRSTNGVILVFDMTQRESFNKVVEWYDDV--------- 105
Query: 142 LASGGPGGLPVPYVVIGNKADVAAK 166
S G PV Y+V GNK+D++ K
Sbjct: 106 -MSKSEGSRPVVYIV-GNKSDLSDK 128
>gi|255536817|ref|XP_002509475.1| protein with unknown function [Ricinus communis]
gi|223549374|gb|EEF50862.1| protein with unknown function [Ricinus communis]
Length = 206
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 36/205 (17%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD--AARQWVEKQGLLP-----SSE 194
P+VV+GNK DV G + +V AR W +G +P + E
Sbjct: 116 --------ENFPFVVLGNKIDV------DGGNSRVVSEKKARAWCASKGNIPYFETSAKE 161
Query: 195 ELPLTESFP--GGGGLIAAAKEARY 217
+ + E+F L++ +E Y
Sbjct: 162 GINVEEAFQCIAKNALLSGEEEEIY 186
>gi|168034819|ref|XP_001769909.1| Rab7/RabG-family small GTPase [Physcomitrella patens subsp. patens]
gi|162678815|gb|EDQ65269.1| Rab7/RabG-family small GTPase [Physcomitrella patens subsp. patens]
Length = 214
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 13/142 (9%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQV-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ ++ +L W E TF+
Sbjct: 56 LVTMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLDNWRDEFLIQATFTLR 115
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
L + P+VV+GNK DV
Sbjct: 116 LTASPSDQENFPFVVLGNKVDV 137
>gi|1370186|emb|CAA98170.1| RAB7C [Lotus japonicus]
Length = 206
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD--AARQWVEKQGLLPSSE 194
P+VVIGNK D+ G + +V AR W +G +P E
Sbjct: 116 --------ENFPFVVIGNKIDI------DGGNSRVVSEKKARAWCASKGNIPYFE 156
>gi|117939043|dbj|BAF36675.1| Small G Protein RAB [Pyrsonympha grandis]
gi|117939045|dbj|BAF36676.1| Small G Protein RAB [Pyrsonympha grandis]
Length = 184
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 74/142 (52%), Gaps = 18/142 (12%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++VLVVGD GVGKTSL+ V + FSR +T T+GV + I ++
Sbjct: 2 LKVLVVGDLGVGKTSLIQRYVH-NIFSREYKT---TIGVDF--------AYKLIPIAEDK 49
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWDI+G ERY + + Y + G I V DLS+ T S++KW +I + P
Sbjct: 50 VVRLQLWDIAGQERYGNMTRVYYREAFGAIIVFDLSRPGTLDSVRKWKADIDSKVRLPDP 109
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
S P+P V++ NK D+
Sbjct: 110 DES------PIPVVLMANKCDL 125
>gi|255549976|ref|XP_002516039.1| protein with unknown function [Ricinus communis]
gi|223544944|gb|EEF46459.1| protein with unknown function [Ricinus communis]
Length = 207
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 89/210 (42%), Gaps = 46/210 (21%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + ++
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQF-------------EDK 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADV----------------AAKEG------TRGSSGNLVDA 179
P+VV+GNK DV A +G T G VDA
Sbjct: 116 --------ENFPFVVLGNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDA 167
Query: 180 ARQWVEKQGLLPSSEE---LPLTESFPGGG 206
A Q + K L EE LP T GGG
Sbjct: 168 AFQCIAKNALKNEPEEEIYLPDTIDVGGGG 197
>gi|89258439|gb|ABD65443.1| Rab32 [Suberites domuncula]
Length = 212
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 21/167 (12%)
Query: 15 GGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNS 74
GG ++LV+GD G GKTS++ V TIG +K + +
Sbjct: 6 GGKQEHLYKILVIGDLGTGKTSIIKRYVHQFFSPHYRATIGVDFALKVLNW--------- 56
Query: 75 IKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIAT 134
D+ ++LWDI+G ER+ + + Y + G V D+++ T ++Q W ++ +
Sbjct: 57 ---DNNTTIRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDVTRLSTFEAVQMWKADLDS 113
Query: 135 SGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAAR 181
P G P+P V++ NK D+A+ EG G+ L + R
Sbjct: 114 KVLL--------PNGKPIPAVLLANKCDLAS-EGFLGNVNQLDEYCR 151
>gi|3914539|sp|P93267.1|RAB7_MESCR RecName: Full=Ras-related protein Rab7A
gi|1842069|gb|AAB47557.1| Nt-rab7a homolog [Mesembryanthemum crystallinum]
Length = 207
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++++++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKIIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKELQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + +D++ ++ SL +W E + + P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLTYDVNVMKSFESLNRWREEFLIQASPADP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
P+V++GNK DV G SG +V A+ W +G +P E
Sbjct: 116 --------DNFPFVLLGNKIDV------DGGSGRVVSEKKAKAWCMSKGNIPYFE 156
>gi|400923|sp|P31022.1|RAB7_PEA RecName: Full=Ras-related protein Rab7
gi|20756|emb|CAA46600.1| RAS-related GTP-binding protein [Pisum sativum]
Length = 206
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSVKSFDNLNNWREEFLIQANPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
P+VVIGNK D+ G + +V AR W +G +P E
Sbjct: 116 --------ENFPFVVIGNKIDI------DGGNSRVVSEKKARAWCAAKGNIPYFE 156
>gi|297852170|ref|XP_002893966.1| hypothetical protein ARALYDRAFT_473785 [Arabidopsis lyrata subsp.
lyrata]
gi|297339808|gb|EFH70225.1| hypothetical protein ARALYDRAFT_473785 [Arabidopsis lyrata subsp.
lyrata]
Length = 212
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 28/162 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VL++GDSGVGK+SL+ L ++F S TIG VK++T G E+
Sbjct: 15 KVLLIGDSGVGKSSLL-LSFTSNTFDDLSPTIGVDFKVKYLTIG-------------EKK 60
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEIATSGTFSAP 141
+ +WD +G ER++ S Y G+I V+D+++R T T+L WA EI T
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDC 120
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQW 183
+ +++GNK D ++ G +D AR++
Sbjct: 121 IK-----------MLVGNKVDKESERAVSKKEG--IDFAREY 149
>gi|117939047|dbj|BAF36677.1| Small G Protein RAB [Pyrsonympha grandis]
gi|117939051|dbj|BAF36679.1| Small G Protein RAB [Dinenympha exilis]
gi|117939053|dbj|BAF36680.1| Small G Protein RAB [Dinenympha exilis]
gi|117939055|dbj|BAF36681.1| Small G Protein RAB [Dinenympha exilis]
Length = 187
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 72/143 (50%), Gaps = 20/143 (13%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQ-TIGCTVGVKHITYGSSGSSSNSIKGDSE 80
++VLVVGD GVGKTSL+ V + FSR + TIG K I +
Sbjct: 2 LKVLVVGDLGVGKTSLIQRYVH-NIFSREYKATIGVDFAYKLIPIAE------------D 48
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
+ ++LWDI+G ERY + + Y + G I V DLS+ T S++KW +I +
Sbjct: 49 KVVRLQLWDIAGQERYGNMTRVYYREAFGAIIVFDLSRPGTLDSVRKWKADIDSKVRLPD 108
Query: 141 PLASGGPGGLPVPYVVIGNKADV 163
P S P+P V++ NK D+
Sbjct: 109 PDES------PIPVVLMANKCDL 125
>gi|15218575|ref|NP_175056.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
gi|145324172|ref|NP_001077675.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
gi|186488925|ref|NP_001117435.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
gi|75097949|sp|O23657.1|RABC1_ARATH RecName: Full=Ras-related protein RABC1; Short=AtRABC1; AltName:
Full=Ras-related protein Rab18; Short=AtRab18
gi|7523663|gb|AAF63103.1|AC006423_4 AtRab18 [Arabidopsis thaliana]
gi|13878001|gb|AAK44078.1|AF370263_1 putative GTP-binding protein RAB1Y [Arabidopsis thaliana]
gi|2231312|gb|AAB61997.1| AtRab18 [Arabidopsis thaliana]
gi|17104731|gb|AAL34254.1| putative GTP-binding protein RAB1Y [Arabidopsis thaliana]
gi|21555736|gb|AAM63924.1| GTP-binding protein(RAB1Y), putative [Arabidopsis thaliana]
gi|110743628|dbj|BAE99651.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332193882|gb|AEE32003.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
gi|332193883|gb|AEE32004.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
gi|332193884|gb|AEE32005.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
Length = 212
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 28/162 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VL++GDSGVGK+SL+ L ++F S TIG VK++T G E+
Sbjct: 15 KVLLIGDSGVGKSSLL-LSFTSNTFDDLSPTIGVDFKVKYLTIG-------------EKK 60
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEIATSGTFSAP 141
+ +WD +G ER++ S Y G+I V+D+++R T T+L WA EI T
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDC 120
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQW 183
+ +++GNK D ++ G +D AR++
Sbjct: 121 IK-----------MLVGNKVDKESERAVSKKEG--IDFAREY 149
>gi|290991925|ref|XP_002678585.1| rab family small GTPase [Naegleria gruberi]
gi|284092198|gb|EFC45841.1| rab family small GTPase [Naegleria gruberi]
Length = 284
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 21/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD VGKTSL+ G S TIG +KHI + + S S
Sbjct: 62 KVLVVGDYAVGKTSLIRRYCTGEFTSNYRITIGVDFCLKHIDWNENTSVS---------- 111
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+GHER+ + Y + D+S+ T +++KW +I +
Sbjct: 112 --LQLWDIAGHERFGAMTRVYYKYAIAAVVCFDISRPSTLDNVKKWRDDINSKVVL---- 165
Query: 143 ASGGPGGL-PVPYVVIGNKADV 163
P G+ P+P +++ NK D+
Sbjct: 166 ----PDGVTPIPMILLANKCDL 183
>gi|224080323|ref|XP_002306097.1| predicted protein [Populus trichocarpa]
gi|118481635|gb|ABK92759.1| unknown [Populus trichocarpa]
gi|222849061|gb|EEE86608.1| predicted protein [Populus trichocarpa]
Length = 206
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDHLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD--AARQWVEKQGLLPSSE 194
P+VV+GNK DV G + +V AR W +G +P E
Sbjct: 116 --------ENFPFVVLGNKVDV------DGGNSRVVSEKKARAWCASKGNIPYFE 156
>gi|117939059|dbj|BAF36683.1| Small G Protein RAB [Dinenympha exilis]
Length = 186
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 72/143 (50%), Gaps = 20/143 (13%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQ-TIGCTVGVKHITYGSSGSSSNSIKGDSE 80
++VLVVGD GVGKTSL+ V + FSR + TIG K I +
Sbjct: 2 LKVLVVGDLGVGKTSLIQRYVH-NIFSREYKATIGVDFAYKLIPIAE------------D 48
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
+ ++LWDI+G ERY + + Y + G I V DLS+ T S++KW +I +
Sbjct: 49 KVVRLQLWDIAGQERYGNMTRVYYREAFGAIIVFDLSRPGTLDSVRKWKADIDSKVRLPD 108
Query: 141 PLASGGPGGLPVPYVVIGNKADV 163
P S P+P V++ NK D+
Sbjct: 109 PDES------PIPVVLMANKCDL 125
>gi|340059511|emb|CCC53898.1| putative ras-related GTP-binding protein [Trypanosoma vivax Y486]
Length = 215
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 83/172 (48%), Gaps = 6/172 (3%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+++++ +G +GVGK+ L+ +G ++ TIG GVK + + S S++ S
Sbjct: 18 RIKIVSLGSTGVGKSCLIKHFCEGRFVAKYIPTIGIDYGVKRVEVRAPRSVSSATSNVSV 77
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
R V WD+SG + + R+ Y G++ V+D++ + ++L+ W E
Sbjct: 78 R---VNFWDMSGGNEFLEVRNEFYGAAEGILLVYDVTDAASFSALEGWLGEADKYRNTKP 134
Query: 141 PLASGGPGGLPVPY--VVIGNKADVAAKEGTRGSSGNLVDA-ARQWVEKQGL 189
AS G P Y VV GNK D A G+ G + +A R+W + +G
Sbjct: 135 ADASAAKLGDPRRYVTVVCGNKVDEAGDNGSGGKRRAVTEATGRKWAQDRGF 186
>gi|224073923|ref|XP_002304199.1| predicted protein [Populus trichocarpa]
gi|118481755|gb|ABK92817.1| unknown [Populus trichocarpa]
gi|118489463|gb|ABK96534.1| unknown [Populus trichocarpa x Populus deltoides]
gi|222841631|gb|EEE79178.1| predicted protein [Populus trichocarpa]
Length = 207
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 86/210 (40%), Gaps = 46/210 (21%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 MFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEG----------------------TRGSSGNLVDA 179
P+VV+GNK DV T G VDA
Sbjct: 116 --------ENFPFVVLGNKIDVDGGNSRVVSEKKAKAWCAAKGNIPYFETSAKEGFNVDA 167
Query: 180 ARQWVEKQGLLPSSEE---LPLTESFPGGG 206
A Q + K L EE LP T GGG
Sbjct: 168 AFQCIAKNALKNEPEEEIYLPDTIDVGGGG 197
>gi|440790656|gb|ELR11936.1| Ras family protein [Acanthamoeba castellanii str. Neff]
Length = 228
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 17/165 (10%)
Query: 18 PTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKG 77
P +++++VGDSGVGK+++++ +F S+T T+GV T + +SN
Sbjct: 9 PDYLLKIVIVGDSGVGKSNIMSRFT-NDTFEESSKT---TIGVAFATKNMAVETSNDSTK 64
Query: 78 DSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGT 137
D ++ +++WD +G ERY+ S Y G + V+D++ R + S+ KW EI T
Sbjct: 65 DCKKQVKLQVWDTAGQERYRALSSAYYRGAQGALVVYDITSRESLDSIPKWLEEIDKYCT 124
Query: 138 FSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQ 182
V ++GNK D++ G V AAR+
Sbjct: 125 ------------QDVVVTLVGNKLDLSENRCVSVEEGKKV-AARE 156
>gi|440297920|gb|ELP90561.1| rab17, putative [Entamoeba invadens IP1]
Length = 209
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 109/247 (44%), Gaps = 49/247 (19%)
Query: 19 TGQVRVLVVGDSGVGKTSLVNLIVKG--SSFSRPSQTIGCTVGVKHITYGSSGSSSNSIK 76
T Q++++V+G+ VGKTS + G RP TIG VK T
Sbjct: 7 TLQLKIIVIGEPNVGKTSTIRKYCHGVFDQLYRP--TIGVDFAVKMTTV----------- 53
Query: 77 GDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
++D + LWDI+G E+Y + Y+ +G I ++DL+ T + +W ++
Sbjct: 54 --DDKDVELRLWDIAGQEKYIAMTRVYYNGAHGAIIMYDLTNPETFNATDRWKDDLENKV 111
Query: 137 TFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEEL 196
F+ +P +++GNKAD + + + +L R V++Q
Sbjct: 112 KFNEQ---------SIPALLVGNKADALTEAELKRAEEDL----RAKVDEQKY------- 151
Query: 197 PLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEM-PAPNPWSISPTHKPIQ 255
G++ +AK +EA+ K R++ + FSD + P PN ++ + K IQ
Sbjct: 152 --------ADGILTSAKSGLAVEEAMAKITRLIFKT--FSDLVNPKPNADAVDLS-KQIQ 200
Query: 256 RLDENSS 262
DE +S
Sbjct: 201 PKDEGAS 207
>gi|156537368|ref|XP_001606642.1| PREDICTED: ras-related protein Rab-32-like [Nasonia vitripennis]
Length = 222
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 20/141 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKT++V +G S TIG +K++ + DS+
Sbjct: 26 KILVIGDYGVGKTAIVRRYTEGKFSSNYKITIGADFAIKNLDW------------DSQTK 73
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+GHER+ + Y V D+S+ T S++KW ++ T
Sbjct: 74 IKLQLWDIAGHERFGYMTRVYYKYAVAAALVFDISRVATFQSVKKWLGDLREKVTL---- 129
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
P G +P V++ NK D+
Sbjct: 130 ----PDGSKIPIVLLANKCDI 146
>gi|307198015|gb|EFN79075.1| Ras-related protein Rab-32 [Harpegnathos saltator]
Length = 217
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 20/152 (13%)
Query: 14 NGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSN 73
N G + LV+GD GVGKT+LV +G S TIG +K
Sbjct: 16 NFGQKEHLFKFLVIGDYGVGKTALVRRYTEGKFSSNYKITIGADFAIK------------ 63
Query: 74 SIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIA 133
S+ D ++LWDI+GHER+ + Y V D+S+ T S++KW ++
Sbjct: 64 SLDWDPHTKINLQLWDIAGHERFGYMTRVYYKYAVAAALVFDISRMATFQSMKKWLCDLR 123
Query: 134 TSGTFSAPLASGGPGGLPVPYVVIGNKADVAA 165
T S G +P V++ NK D++
Sbjct: 124 EKVTLS--------DGSSIPIVLLANKCDISV 147
>gi|117939057|dbj|BAF36682.1| Small G Protein RAB [Dinenympha exilis]
Length = 187
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 72/143 (50%), Gaps = 20/143 (13%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQ-TIGCTVGVKHITYGSSGSSSNSIKGDSE 80
++VLVVGD GVGKTSL+ V + FSR + TIG K I +
Sbjct: 2 LKVLVVGDLGVGKTSLIQRYVY-NIFSREYKATIGVDFAYKLIPIAE------------D 48
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
+ ++LWDI+G ERY + + Y + G I V DLS+ T S++KW +I +
Sbjct: 49 KVVRLQLWDIAGQERYGNMTRVYYREAFGAIIVFDLSRPGTLDSVRKWKADIDSKVRLPD 108
Query: 141 PLASGGPGGLPVPYVVIGNKADV 163
P S P+P V++ NK D+
Sbjct: 109 PDES------PIPVVLMANKCDL 125
>gi|351721665|ref|NP_001237217.1| uncharacterized protein LOC100305824 [Glycine max]
gi|356521867|ref|XP_003529572.1| PREDICTED: ras-related protein Rab7-like [Glycine max]
gi|1370188|emb|CAA98171.1| RAB7D [Lotus japonicus]
gi|255626709|gb|ACU13699.1| unknown [Glycine max]
Length = 207
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 89/210 (42%), Gaps = 46/210 (21%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNHWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADV----------------AAKEG------TRGSSGNLVDA 179
P+VV+GNK DV A +G T G V+A
Sbjct: 116 --------ENFPFVVLGNKIDVDGGNSRVISEKKAKAWCASKGNIPYFETSAKEGFNVEA 167
Query: 180 ARQWVEKQGLLPSSEE---LPLTESFPGGG 206
A Q + K L EE LP T GGG
Sbjct: 168 AFQCIAKNALKNEPEEEMYLPDTIDVGGGG 197
>gi|340379925|ref|XP_003388475.1| PREDICTED: ras-related protein Rab-32-like [Amphimedon
queenslandica]
Length = 210
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 21/168 (12%)
Query: 15 GGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNS 74
GG +VLV+GD G GKTS++ V TIG +K + +
Sbjct: 5 GGKQEHLYKVLVIGDLGTGKTSIIKRYVHQFFSPHYRATIGVDFALKVLNW--------- 55
Query: 75 IKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIAT 134
D+ ++LWDI+G ER+ + + Y + G V D+++ T ++ W ++
Sbjct: 56 ---DNNTTIRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDMTRLSTFEAVTMWKSDLDN 112
Query: 135 SGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQ 182
P G P+P V++ NK D+A+ EG G+ G L D ++
Sbjct: 113 KVLL--------PNGKPIPAVLLANKCDLAS-EGFLGNVGQLDDYCKE 151
>gi|117939049|dbj|BAF36678.1| Small G Protein RAB [Pyrsonympha grandis]
Length = 183
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 72/143 (50%), Gaps = 20/143 (13%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQ-TIGCTVGVKHITYGSSGSSSNSIKGDSE 80
++VLVVGD GVGKTSL+ V + FSR + TIG K I +
Sbjct: 2 LKVLVVGDLGVGKTSLIQRYVH-NIFSREYKATIGVDFAYKLIPIAE------------D 48
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
+ ++LWDI+G ERY + + Y + G I V DLS+ T S++KW +I +
Sbjct: 49 KVVRLQLWDIAGQERYGNMTRVYYREAFGAIIVFDLSRPGTLDSVRKWKADIDSKVRLPD 108
Query: 141 PLASGGPGGLPVPYVVIGNKADV 163
P S P+P V++ NK D+
Sbjct: 109 PDES------PIPVVLMANKCDL 125
>gi|242012932|ref|XP_002427179.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212511462|gb|EEB14441.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 223
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+++LVVGD GVGKT+++ V+G S TIG +K + + DS
Sbjct: 26 MLKILVVGDYGVGKTAVIRRYVEGKFTSNYKVTIGADFSIKTMPW------------DST 73
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
+ ++LWDI+G+E+ + Y + V D+S+ T SLQ W +I S
Sbjct: 74 TEVNIQLWDIAGNEKLTFMSRVYYKYAAAAVIVIDISRIATFHSLQNWLKDIRDKVILS- 132
Query: 141 PLASGGPGGLPVPYVVIGNKADV 163
GLPVP +++ NK D+
Sbjct: 133 -------DGLPVPIIILVNKCDI 148
>gi|326434156|gb|EGD79726.1| rab GTPase [Salpingoeca sp. ATCC 50818]
Length = 210
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 21/148 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGDSGVGKTSL+ V G + + TIG +K + + +
Sbjct: 12 KVLVVGDSGVGKTSLIKRYVHGVASDKYKATIGVDFALKVLQVNENTTVR---------- 61
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + G V D+++ T +++ W +I
Sbjct: 62 --LQLWDIAGQERFGSMTRVYYKEAVGAFVVFDVTRLDTFKAVKTWKEDIDAKVFL---- 115
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTR 170
P G +P V++ NK D+A EG R
Sbjct: 116 ----PDGSKIPVVLMANKCDLAV-EGFR 138
>gi|440800473|gb|ELR21511.1| Rab GTPase, putative [Acanthamoeba castellanii str. Neff]
Length = 228
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 17/165 (10%)
Query: 18 PTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKG 77
P +++++VGDSGVGK+++++ +F S+T T+GV T + +SN
Sbjct: 9 PDYLLKIVIVGDSGVGKSNIMSRFT-NDTFEESSKT---TIGVAFATKNMAVETSNDSTK 64
Query: 78 DSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGT 137
D ++ +++WD +G ERY+ S Y G + V+D++ R + S+ KW EI T
Sbjct: 65 DCKKQVKLQVWDTAGQERYRALSSAYYRGAQGALVVYDITSRESLDSIPKWLEEIDKYCT 124
Query: 138 FSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQ 182
V ++GNK D++ G V AAR+
Sbjct: 125 ------------QDVVVTLVGNKLDLSENRCVSVEEGKKV-AARE 156
>gi|297830542|ref|XP_002883153.1| hypothetical protein ARALYDRAFT_898258 [Arabidopsis lyrata subsp.
lyrata]
gi|297328993|gb|EFH59412.1| hypothetical protein ARALYDRAFT_898258 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
P+V+IGNK DV G + +V A+ W +G +P E
Sbjct: 116 --------ENFPFVLIGNKVDV------DGGNSRVVSEKKAKAWCASKGNIPYFE 156
>gi|330791341|ref|XP_003283752.1| Rab GTPase [Dictyostelium purpureum]
gi|325086375|gb|EGC39766.1| Rab GTPase [Dictyostelium purpureum]
Length = 218
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 19/141 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LVVGD G GKTS++ V TIG +K I + D + +
Sbjct: 17 KILVVGDIGTGKTSIIKRFVHNIFSMHYKSTIGVDFALKVINW------------DPKTE 64
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + G + D+++ T ++ KW +I + T+
Sbjct: 65 VRLQLWDIAGQERFGSMTRVYYKEAVGAMITFDVTRMSTFEAVAKWKADIDSKVTY---- 120
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
GP P+P V++ NK D+
Sbjct: 121 ---GPEEKPIPVVLLANKCDL 138
>gi|281200842|gb|EFA75058.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 250
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 20/146 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LVVGD G GKTS++ V TIG +K I + D + +
Sbjct: 16 KILVVGDIGTGKTSIIKRFVHNIFSMHYKSTIGVDFALKVINW------------DPKTE 63
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + G + D+++ T ++ KW +I + T
Sbjct: 64 VRLQLWDIAGQERFGSMTRVYYKEAVGAMITFDVTRASTFEAVSKWKADIDSKVTI---- 119
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEG 168
GP P+P V++ NK D+ KEG
Sbjct: 120 ---GPEEKPIPVVLLANKCDL-GKEG 141
>gi|116783756|gb|ABK23074.1| unknown [Picea sitchensis]
gi|116792182|gb|ABK26263.1| unknown [Picea sitchensis]
gi|224284728|gb|ACN40095.1| unknown [Picea sitchensis]
gi|224286503|gb|ACN40958.1| unknown [Picea sitchensis]
Length = 206
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVLKSFDNLNNWRDEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
P+VV+GNK DV G + +V AR W +G +P E
Sbjct: 116 --------ENFPFVVLGNKIDV------DGGNSRVVSEKKARAWCASKGNIPYFE 156
>gi|325190253|emb|CCA24730.1| Rab32 family GTPase putative [Albugo laibachii Nc14]
Length = 215
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 67/142 (47%), Gaps = 21/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++VLV+GD+ GK+S++ V GS TIG +K T + G + R
Sbjct: 15 IKVLVLGDAATGKSSIIRRYVYGSFVEHHQTTIGVDFSLKAAT----------VNGTTVR 64
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
V+LWDI+G E ++ + Y + V+D+S T S+ KW EI T
Sbjct: 65 ---VQLWDIAGQEHFRALSRVYYKDALAALLVYDISSPETFESVLKWKKEIETKVEL--- 118
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
P P+P V+ GNK+D+
Sbjct: 119 -----PNHKPLPVVLCGNKSDL 135
>gi|268534388|ref|XP_002632325.1| Hypothetical protein CBG00332 [Caenorhabditis briggsae]
Length = 248
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 24/157 (15%)
Query: 23 RVLVVGDSGVGKTSLVNLIVK--GSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
++LV+GDS VGKTSL + I G +F TIG TV + Y + +
Sbjct: 10 KILVLGDSCVGKTSLCHCIASQPGRNFD---STIGATVIMAWHDYRAGTPE--------Q 58
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
R +ELWD+ G ++ + + G I VHDL+ RR++ +L W + G A
Sbjct: 59 RSELLELWDVGGMVAHRQAAQVFFEGAVGAILVHDLTNRRSEENLATWLTML--DGKPRA 116
Query: 141 PLASGGPGGLP---------VPYVVIGNKADVAAKEG 168
P +S P + +P +++G KAD+ +G
Sbjct: 117 PTSSKDPAAVALKVDIESCNIPVLIVGTKADLVPHKG 153
>gi|346467497|gb|AEO33593.1| hypothetical protein [Amblyomma maculatum]
Length = 229
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG + K + + +R
Sbjct: 33 LKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADLLTKEVQF-------------EDR 79
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 80 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDP 139
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
P+VV+GNK DV G + +V A+ W +G +P E
Sbjct: 140 --------DNFPFVVLGNKVDVD------GGNSRVVSEKKAKAWCASKGNIPYFE 180
>gi|388520895|gb|AFK48509.1| unknown [Lotus japonicus]
Length = 207
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 46/210 (21%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V++ GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIIFGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNHWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADV----------------AAKEG------TRGSSGNLVDA 179
P+VV+GNK DV A +G T G V+A
Sbjct: 116 --------ENFPFVVLGNKIDVDGGNSRVISEKKAKAWCASKGNIPYFETSAKEGFNVEA 167
Query: 180 ARQWVEKQGLLPSSEE---LPLTESFPGGG 206
A Q + K L EE LP T GGG
Sbjct: 168 AFQCIAKNALKNEPEEEMYLPDTIDVGGGG 197
>gi|407039313|gb|EKE39573.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 201
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 84/172 (48%), Gaps = 32/172 (18%)
Query: 10 NKELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSG 69
N++L+ G ++V+V+G+ G GKT +++ + + F R + T+GC K ITY
Sbjct: 26 NEQLSKG-----IKVVVLGEMGTGKTCILHRWI-SNEFVRQTATVGCAFSSKTITY---- 75
Query: 70 SSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWA 129
++R ELWD +G ERY+ SI Y + V+D+++R T ++ W
Sbjct: 76 ---------NKRIIKYELWDAAGQERYRSLSSIYYRNATVALLVYDITKRETFNAVTDWV 126
Query: 130 VEIATSGTFSAPLASGGPGGLPVPYVVIGNKADV-AAKEGTRGSSGNLVDAA 180
E+ ++ T + +++GNK D+ +E + S + +++
Sbjct: 127 AELKSNTTN------------DIMILIVGNKDDLQEEREVNQNSVNDFINSC 166
>gi|410907535|ref|XP_003967247.1| PREDICTED: ras and EF-hand domain-containing protein homolog
[Takifugu rubripes]
Length = 708
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 25/158 (15%)
Query: 18 PTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKG 77
P +V++VG+S VGKTSL+ S S T+G VK IT SS +
Sbjct: 518 PDRLFKVVMVGNSSVGKTSLLRRFCDDSFHPGTSATVGIDYSVKTITVDSSQVA------ 571
Query: 78 DSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGT 137
+++WD +G ERY+ + + +GV+ ++D++ ++ T++++W I S
Sbjct: 572 -------LQMWDTAGQERYRSITKQFFRKADGVVVMYDITAEQSFTAIRQWLTSIKES-- 622
Query: 138 FSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGN 175
G +P +++GNK D + + +G
Sbjct: 623 ----------AGEDIPIMLLGNKTDKQMERQVQHEAGQ 650
>gi|407041312|gb|EKE40659.1| Rab family GTPase, partial [Entamoeba nuttalli P19]
Length = 208
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 100/239 (41%), Gaps = 46/239 (19%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
Q++++V+G+ VGKTS + G TIG VK T E
Sbjct: 8 QLKIIVIGEPSVGKTSTIRKYCHGVFDQLYRATIGVDFAVKFTTV-------------DE 54
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
RD + LWDI+G E+Y + Y+ +G I ++DL+ T + +W ++ F+
Sbjct: 55 RDVELRLWDIAGQEKYIAMTRVYYNGAHGAIIMYDLTNPDTFAATDRWKEDLENKVKFNE 114
Query: 141 PLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTE 200
+P +++GNKAD ++E + + +L+ + G+L S
Sbjct: 115 Q---------SIPALLVGNKADCLSEEELKKAQEDLMAKVAEQKYSDGILTS-------- 157
Query: 201 SFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEM---PAPNPWSISPTHKPIQR 256
AK +EA+ K R++ ++ FSD + P N IS + Q+
Sbjct: 158 -----------AKSGLAVEEAMAKITRLIFKQ--FSDLVNPKPDANNVDISKQGQQTQK 203
>gi|326505594|dbj|BAJ95468.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326533112|dbj|BAJ93528.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 206
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + Y +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQY-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
P+V++GNK D+ G + +V A+ W +G +P E
Sbjct: 116 --------DNFPFVLLGNKVDI------DGGNSRVVSEKKAKAWCASKGNIPYFE 156
>gi|71834648|ref|NP_001025428.1| ras-related protein Rab-27A [Danio rerio]
gi|66910492|gb|AAH97191.1| Zgc:114135 [Danio rerio]
Length = 222
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 97/232 (41%), Gaps = 29/232 (12%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++ L +GDSGVGKTS + S+ T+G K + Y SSG + +G +
Sbjct: 10 IKFLALGDSGVGKTSFLYQYTDSKFNSKFITTVGIDFREKRVVYKSSGPDGTAGRG---Q 66
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ + + G + + DL+ ++ +++ W ++ T P
Sbjct: 67 RIHIQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWMSQLQTHAYCENP 126
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
V+ GNK+D+ + + + AR+ EK G +P E+
Sbjct: 127 -----------DIVLCGNKSDLEEQRAVKAEN------ARELAEKYG-------VPYFET 162
Query: 202 FPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAPNPWSISPTHKP 253
G ++ A E D +MK + + + D N S + +P
Sbjct: 163 SAANGENVSRAVEVLLD--LIMKRMERCVDKSWIPDGTVRSNGHSTADLTEP 212
>gi|70906330|gb|AAZ14934.1| putative GTPase [Coprinellus disseminatus]
Length = 177
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 79/175 (45%), Gaps = 36/175 (20%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V R S T+G +T S++ D ++
Sbjct: 8 LKVIILGDSGVGKTSLMNQYVN----KRFSNQYKATIGADFLT--------KSVEVDDQQ 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V D++ ++ +L+ W E
Sbjct: 56 -VTIQLWDTAGQERFQSLGVAFYRGADCCVLVFDVNSSKSFQALEGWRDEF--------- 105
Query: 142 LASGGPGGLP--VPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
L P G P P+VV+GNK DV K A W +G LP E
Sbjct: 106 LIQASPQGDPEEFPFVVVGNKVDVTQKR------------AMAWCAAKGNLPYFE 148
>gi|358344498|ref|XP_003636326.1| Ras-related protein Rab7 [Medicago truncatula]
gi|355502261|gb|AES83464.1| Ras-related protein Rab7 [Medicago truncatula]
Length = 221
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 29/213 (13%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + SQ T+G +T ++ D +R
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVH----KKFSQQYKATIGADFVT--------KELQID-DR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ ++ +L W E S P
Sbjct: 56 LVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPSNP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD-AARQWVEKQGLLPSSEELPLTE 200
P++++GNK D+ G+S + D A+ W +G +P E E
Sbjct: 116 --------STFPFILLGNKVDIDG-----GNSRVVSDKKAKDWCASKGNVPYFET-SAKE 161
Query: 201 SFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRR 233
+ AK A + E + FR L+ RR
Sbjct: 162 DLNVDAAFLRIAKTALAN-EHIFNLFRSLLFRR 193
>gi|67481145|ref|XP_655922.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56473090|gb|EAL50536.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790126|dbj|BAD82859.1| small GTPase EhRabX11 [Entamoeba histolytica]
Length = 209
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 100/239 (41%), Gaps = 46/239 (19%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
Q++++V+G+ VGKTS + G TIG VK T E
Sbjct: 9 QLKIIVIGEPSVGKTSTIRKYCHGVFDQLYRATIGVDFAVKFTTV-------------DE 55
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
RD + LWDI+G E+Y + Y+ +G I ++DL+ T + +W ++ F+
Sbjct: 56 RDVELRLWDIAGQEKYIAMTRVYYNGAHGAIIMYDLTNPDTFAATDRWKEDLENKVKFNE 115
Query: 141 PLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTE 200
+P +++GNKAD ++E + + +L+ + G+L S
Sbjct: 116 Q---------SIPALLVGNKADCLSEEELKKAQEDLMAKVAEQKYSDGILTS-------- 158
Query: 201 SFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEM---PAPNPWSISPTHKPIQR 256
AK +EA+ K R++ ++ FSD + P N IS + Q+
Sbjct: 159 -----------AKSGLAVEEAMAKITRLIFKQ--FSDLVNPKPDANNVDISKQGQQTQK 204
>gi|405965375|gb|EKC30753.1| WD repeat-containing protein 82 [Crassostrea gigas]
Length = 517
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 31/176 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+V+++GD VGKTS V V + TIG +K + + S S +IK
Sbjct: 312 KVIIIGDPTVGKTSFVQRYVNDAYRRDYKMTIGVDFALKVVKW----SESQTIK------ 361
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + I + DL+Q+ T + KW ++ T L
Sbjct: 362 --LQLWDIAGQERFTSMTRVYYKDAHACIIMFDLTQQSTFQNAVKWKKDLDT----KCSL 415
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQ-----WVE---KQGLL 190
A G P+P +++ NK D++ +E + ++ D ++ W E K+GL+
Sbjct: 416 ADGS----PIPCLLLANKCDLSHREVQQ---SDIEDMCKEHDFVGWTETSVKEGLM 464
>gi|254586679|ref|XP_002498907.1| ZYRO0G21384p [Zygosaccharomyces rouxii]
gi|238941801|emb|CAR29974.1| ZYRO0G21384p [Zygosaccharomyces rouxii]
Length = 218
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 78/172 (45%), Gaps = 20/172 (11%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
Q +++++GDS VGK+S+V+ VK S TIG + I GS +
Sbjct: 3 QFKLVLLGDSSVGKSSIVHRFVKDSFDEFRESTIGAAFLSQTIKIEDKGSQQEVV----- 57
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
E+WD +G ERYK + Y N + V+D++Q+ + Q W E+ T
Sbjct: 58 --IKFEIWDTAGQERYKSLAPMYYRNANAALVVYDVTQQDSLAKAQGWVNELKTK----- 110
Query: 141 PLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDA--ARQWVEKQGLL 190
G + ++GNK D+ +EG S V++ A + +QGLL
Sbjct: 111 ------VGEDDLVICLVGNKLDLCTEEGESSSKPKAVESSDAEGYANEQGLL 156
>gi|255556840|ref|XP_002519453.1| protein with unknown function [Ricinus communis]
gi|223541316|gb|EEF42867.1| protein with unknown function [Ricinus communis]
Length = 325
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 109/252 (43%), Gaps = 59/252 (23%)
Query: 16 GPPTGQ-------VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSS 68
G P+G+ +++++GDS VGK+SL+ + G+ P+ TIG + +K IT G
Sbjct: 102 GSPSGKGSDYDHSFKIVLIGDSNVGKSSLIVSFISGAVTELPN-TIGMDIKMKQITVGG- 159
Query: 69 GSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK- 127
+ + +WD +G ER++ S Y +G+I V+D++Q+++ T+L+
Sbjct: 160 ------------KRLKLTIWDTAGQERFRTLTSSYYRDAHGIILVYDVTQKQSFTNLENL 207
Query: 128 WAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQ 187
W E+ T + +++GNK D ++ G +D A+Q Q
Sbjct: 208 WTKEVELYSTNKDCIK-----------MLVGNKVDRESERAVSREEG--MDLAKQ----Q 250
Query: 188 GLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEM------PA 241
G L F E +D + +K + L ++R +E+ P
Sbjct: 251 GFL-----------FLESSAKTRENVEKCFD-DLALKMLQELEKKR--QEELKPKATAPE 296
Query: 242 PNPWSISPTHKP 253
P P + P KP
Sbjct: 297 PKPVELKPPEKP 308
>gi|217071676|gb|ACJ84198.1| unknown [Medicago truncatula]
Length = 221
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 29/213 (13%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + SQ T+G +T ++ D +R
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVH----KKFSQQYKATIGADFVT--------KELQID-DR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ ++ +L W E S P
Sbjct: 56 LVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPSNP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD-AARQWVEKQGLLPSSEELPLTE 200
P++++GNK D+ G+S + D A+ W +G +P E E
Sbjct: 116 --------STFPFILLGNKVDIDG-----GNSRVVSDKKAKDWCASKGNVPYFET-SAKE 161
Query: 201 SFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRR 233
+ AK A + E + FR L+ RR
Sbjct: 162 DLNVDAAFLRIAKTALAN-EHIFNLFRSLLFRR 193
>gi|196009291|ref|XP_002114511.1| hypothetical protein TRIADDRAFT_27795 [Trichoplax adhaerens]
gi|190583530|gb|EDV23601.1| hypothetical protein TRIADDRAFT_27795 [Trichoplax adhaerens]
Length = 184
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 19/141 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V ++ TIG +K I + S S
Sbjct: 12 KILVIGDLGVGKTSIIKRYVHQFFSTQYRATIGVDFALKVIDWKDSNSVVR--------- 62
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+S+ T ++QKW ++ + T +
Sbjct: 63 --LQLWDIAGQERFGNMTRVYYREAVGAFIVFDISRASTFDAVQKWKSDLDSKVTIGEDM 120
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
A +P V++ NK D+
Sbjct: 121 A--------IPVVLLANKCDI 133
>gi|343470451|emb|CCD16850.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 216
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 6/176 (3%)
Query: 15 GGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNS 74
G G+++++ G GVGK+ LV +G S+ TIG GVK + +
Sbjct: 15 GKKSEGRIKIVSTGPVGVGKSCLVKQYCEGRFVSKYIPTIGIDYGVKTVEV----RAPTH 70
Query: 75 IKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIAT 134
+ V WD+SG E Y + R+ Y GV+ V+D++ + T+L W E+ T
Sbjct: 71 LSPTGRLSVRVNFWDMSGCEEYLEIRNEFYRATEGVLLVYDVTNMESFTALNGWVKEMET 130
Query: 135 --SGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQG 188
+ S L + P VV NK D ++G + +A R+W + +G
Sbjct: 131 HMNTKGSDTLVARADPSAPCKVVVCANKIDETTEKGGKKKRMVNEEAGRKWAKDRG 186
>gi|328870650|gb|EGG19023.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 201
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 76/150 (50%), Gaps = 24/150 (16%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
Q ++L++GDS VGKTS IVK S + + CT+GV++ ++K D +
Sbjct: 7 QYKILLIGDSDVGKTS----IVKRFSDDIFDEDLLCTIGVEY--------KVKTLKVDDK 54
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
F +WD +G E+++ S Y +G+I +D+++R T +LQ W EI T T S
Sbjct: 55 EVTF-NIWDTAGQEKFRALISSYYRGAHGIILTYDVTKRETFKNLQYWLNEIETFSTRS- 112
Query: 141 PLASGGPGGLPVPYVVIGNKADVAAKEGTR 170
V +++GNK D +E TR
Sbjct: 113 ----------NVVKLLVGNKIDKENREVTR 132
>gi|321466231|gb|EFX77228.1| hypothetical protein DAPPUDRAFT_305892 [Daphnia pulex]
Length = 668
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 12 ELNGGPPTGQV-RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGS 70
+ NG P + +VLV+G+ G GKTS++ V TIG +K + +
Sbjct: 454 DANGYPKNEHLYKVLVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVVHW----- 508
Query: 71 SSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAV 130
D ++LWDI+G ER+ + + Y + G V D+++ T S+ KW
Sbjct: 509 -------DQSTVIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSSTFESVAKWKQ 561
Query: 131 EIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQ 182
++ T P G P+P V++ NK D KEG S + + R+
Sbjct: 562 DLDTKVQL--------PDGSPIPCVLLANKCD-QPKEGIAASPAKMDEYCRE 604
>gi|440801165|gb|ELR22187.1| Ras family protein [Acanthamoeba castellanii str. Neff]
Length = 220
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 69/146 (47%), Gaps = 20/146 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD G GKTS++ V TIG +K I + D +
Sbjct: 15 KVLVVGDIGTGKTSIIKRYVHNIFSMHYKSTIGVDFALKVINW------------DPKTI 62
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++QKW +I T
Sbjct: 63 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDVTRVNTFEAVQKWKNDIDNKVTLP--- 119
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEG 168
P P+P V++ NK D+ AKEG
Sbjct: 120 ----PDDRPIPVVLLANKCDL-AKEG 140
>gi|413946251|gb|AFW78900.1| hypothetical protein ZEAMMB73_911919 [Zea mays]
Length = 206
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 31/176 (17%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + TIG K + G +R
Sbjct: 10 LKVIVLGDSGVGKTSLMNQYVSKKFSQQYKATIGADFLTKEVLIG-------------DR 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ +R+ +L W E
Sbjct: 57 LVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVKRSFNTLDTWHDEF--------- 107
Query: 142 LASGGPGG-LPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
L GP P++++GNK D+ G S +V AR+W +G +P E
Sbjct: 108 LNQAGPSDPQRFPFILVGNKIDL------DGGSKRMVPEKKAREWCASKGDIPYFE 157
>gi|218197170|gb|EEC79597.1| hypothetical protein OsI_20781 [Oryza sativa Indica Group]
Length = 206
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 29/206 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + TIG K + +R
Sbjct: 10 LKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLI-------------EDR 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ +R+ +L W E T + S P
Sbjct: 57 LVTLQIWDTAGQERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDP 116
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
P++++GNK D+ A G R + A++W +G +P E E
Sbjct: 117 --------KHFPFILLGNKIDIDA--GNRRAIPE--KKAKEWCVSKGNIPYFET-SAKED 163
Query: 202 FPGGGGLIAAAK---EARYDKEAVMK 224
+ + AK E +D++ K
Sbjct: 164 YNVDSAFLCIAKLALEHEHDQDIYFK 189
>gi|449448032|ref|XP_004141770.1| PREDICTED: ras-related protein RABG3d-like isoform 1 [Cucumis
sativus]
Length = 206
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 87/209 (41%), Gaps = 46/209 (22%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQL-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADV----------------AAKEG------TRGSSGNLVDA 179
P+VV+GNK DV A +G T G VDA
Sbjct: 116 --------ENFPFVVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGLNVDA 167
Query: 180 ARQWVEKQGLLPSSEE---LPLTESFPGG 205
A Q + K L EE LP T GG
Sbjct: 168 AFQCIAKNALKNEPEEEVYLPDTIDVAGG 196
>gi|118102410|ref|XP_417967.2| PREDICTED: ras-related protein Rab-7L1 [Gallus gallus]
Length = 205
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 20/148 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV S T+G +K + + S S +++
Sbjct: 9 KVLVVGDATVGKTSLVQRYANDSFNRHYKSTVGVDFALKVVQW----SESETVR------ 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + + D++ T ++ QKW ++ + T
Sbjct: 59 --LQLWDIAGQERFTSMTRLYYREASACVIMFDVTNVSTFSNSQKWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTR 170
P G PVP +++ NK D++ TR
Sbjct: 113 ----PDGSPVPCLLLANKCDLSPWAVTR 136
>gi|32492056|gb|AAP85300.1| Rab7 [Babesia bovis]
Length = 215
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 100/241 (41%), Gaps = 44/241 (18%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++++++GDSGVGKTSL+N + ++ TIG + +T ++
Sbjct: 8 LKIIILGDSGVGKTSLMNQFINKRFTNQYRATIGADFSTQEVTV-------------DDK 54
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D + ++T S++ W E F
Sbjct: 55 VVTLQIWDTAGQERFQSLGKAFYRGADCCMLVYDTTNQKTFESIESWKSE------FLIQ 108
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
+ P P+ +IGNK D A R S N A W + +P E
Sbjct: 109 VEPKDPESF--PFALIGNKVDDVA---NRKVSAN---KATNWCKANNDIPHFE------- 153
Query: 202 FPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAPNPWSISPTHKPIQRLDENS 261
A+AK A+ A M+ + + R DE+ P+ + H +Q+ N
Sbjct: 154 --------ASAKTAQNVAAAFMEIAKKAVMRDTQDDEIYIPDTLLLDQRH--VQQTGNNC 203
Query: 262 S 262
S
Sbjct: 204 S 204
>gi|117939083|dbj|BAF36695.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 196
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 93/220 (42%), Gaps = 42/220 (19%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+V+V+GDSGVGKT L+N ++ TIG K + + R
Sbjct: 1 KVVVLGDSGVGKTCLINQFALNKFSAQYKATIGADFLTKEVVVDN-------------RQ 47
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ LY + I V+D++Q +T +L W E G+ P
Sbjct: 48 VTMQIWDTAGLERFQSLGVALYRGADACILVYDVTQPKTFENLDGWKEEFLFQGSPQDP- 106
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTESF 202
P++++GNK D+ + + A W ++G + E
Sbjct: 107 -------DNFPFMLLGNKIDLEEQRVVQAKK------AENWCHQKGDIKYFE-------- 145
Query: 203 PGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAP 242
+AK+ ++A ++ R+ + R D++PAP
Sbjct: 146 -------TSAKDNSNVEQAFLEIARIGLSREVQDDDIPAP 178
>gi|146096271|ref|XP_001467752.1| putative ras-related rab-4 [Leishmania infantum JPCM5]
gi|398020614|ref|XP_003863470.1| ras-related rab-4, putative [Leishmania donovani]
gi|134072118|emb|CAM70817.1| putative ras-related rab-4 [Leishmania infantum JPCM5]
gi|322501703|emb|CBZ36784.1| ras-related rab-4, putative [Leishmania donovani]
Length = 203
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 28/169 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++++V+GDSGVGK+ L++ ++ + +QTIG G K I G + IK
Sbjct: 9 MKLIVIGDSGVGKSCLLHRFIEDTFSEEQTQTIGIEYGAKIIDLGGA-----KIK----- 58
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ERYK Y G + V+D++ R + S+ +W ++
Sbjct: 59 ---LQIWDTAGQERYKSVTRSYYRGATGCLIVYDVNNRGSYESVPQWLSDVRQ------- 108
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLL 190
G V ++IGNK DVA R N A + ++ GLL
Sbjct: 109 -----LAGSDVVVMLIGNKIDVAKANSVRAVQHN---EASLYAQQNGLL 149
>gi|384253777|gb|EIE27251.1| Rab7/RabG-family small GTPase [Coccomyxa subellipsoidea C-169]
Length = 208
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 32/187 (17%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V S+ TIG K + +R
Sbjct: 11 LKVIILGDSGVGKTSLMNQYVNKKFSSQYKATIGADFLTKEVQV-------------DDR 57
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ ++T +L W E + S P
Sbjct: 58 LVTMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSQKTFENLDNWRDEFLIQASPSNP 117
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD-AARQWVEKQGLLP-----SSEE 195
P+VV+GNK D+ G S + + A+QW +G +P + E+
Sbjct: 118 --------DNFPFVVLGNKVDM-----DEGRSRVVTEKKAKQWCTAKGGIPYFETSAKED 164
Query: 196 LPLTESF 202
L + +F
Sbjct: 165 LNVDSAF 171
>gi|358331554|dbj|GAA50347.1| Ras and EF-hand domain-containing protein homolog [Clonorchis
sinensis]
Length = 773
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 79/168 (47%), Gaps = 25/168 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
RV++ GDS VGKTSL+ + + TIG + ++ IT +R
Sbjct: 486 RVMLAGDSAVGKTSLLVRLCDNMFTGKAVSTIGIDMKMRSITV-------------DDRT 532
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ + Y + +G++ V+D +Q + ++++W + +
Sbjct: 533 AMLQIWDTAGQERFRSISANFYRKADGILLVYDCTQESSFLNIREWMSTVQEN------- 585
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLL 190
G +P ++GNK D+ ++ RG+ R++ ++ G L
Sbjct: 586 -----AGREIPVAIVGNKVDLRDQQELRGAHCVTYVEGRKFAQEIGAL 628
>gi|449491738|ref|XP_004158989.1| PREDICTED: ras-related protein RABG3d-like isoform 1 [Cucumis
sativus]
Length = 206
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 87/209 (41%), Gaps = 46/209 (22%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQL-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADV----------------AAKEG------TRGSSGNLVDA 179
P+VV+GNK DV A +G T G VDA
Sbjct: 116 --------ENFPFVVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGLNVDA 167
Query: 180 ARQWVEKQGLLPSSEE---LPLTESFPGG 205
A Q + K L EE LP T GG
Sbjct: 168 AFQCIAKNALKNGPEEEVYLPDTIDVAGG 196
>gi|67473906|ref|XP_652702.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56469581|gb|EAL47316.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790106|dbj|BAD82849.1| small GTPase EhRabN1 [Entamoeba histolytica]
gi|449702611|gb|EMD43216.1| small GTPase EhRabN1, putative [Entamoeba histolytica KU27]
Length = 201
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 26/154 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+G+ G GKT +++ + + F R + T+GC K +TY ++R
Sbjct: 33 IKVVVLGEMGTGKTCILHRWI-SNEFVRQTATVGCAFSSKTVTY-------------NKR 78
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
ELWD +G ERY+ SI Y + V+D+++R T ++ W E+ ++ T
Sbjct: 79 IIKYELWDAAGQERYRSLSSIYYRNATVALLVYDITKRETFNAVTDWVAELKSNTTN--- 135
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGN 175
+ +++GNK D+ + +S N
Sbjct: 136 ---------DIMILIVGNKDDLQEEREVNQNSVN 160
>gi|440893578|gb|ELR46289.1| Ras-related protein Rab-7L1, partial [Bos grunniens mutus]
Length = 209
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + DSE
Sbjct: 15 KVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWS-----------DSEM- 62
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ QKW ++ + T
Sbjct: 63 VRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQKWKQDLDSKLTL---- 118
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G PVP +++ NK D++
Sbjct: 119 ----PNGEPVPCLLLANKCDLS 136
>gi|343472084|emb|CCD15657.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 216
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 6/176 (3%)
Query: 15 GGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNS 74
G G+++++ G GVGK+ LV +G S+ TIG GVK + +
Sbjct: 15 GKKSEGRIKIVSTGPVGVGKSCLVKQYCEGRFVSKYIPTIGIDYGVKTVEV----RAPTH 70
Query: 75 IKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIAT 134
+ V WD+SG E Y + R+ Y GV+ V+D++ + T+L W E+ T
Sbjct: 71 LSPTGRLSVRVNFWDMSGCEEYLEIRNEFYRATEGVLLVYDVTNMESFTALNGWVKEMET 130
Query: 135 --SGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQG 188
+ S L + P VV NK D ++G + +A R+W + +G
Sbjct: 131 HMNTKGSDTLVARADPSAPCKVVVCANKIDETTEKGGKKKRMVNEEAGRKWAKDRG 186
>gi|67483055|ref|XP_656820.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978604|dbj|BAD34969.1| EhRab7B protein [Entamoeba histolytica]
gi|56474045|gb|EAL51436.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|407044644|gb|EKE42730.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449708173|gb|EMD47684.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 207
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 74/166 (44%), Gaps = 26/166 (15%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GDSGVGKTSL+N V S+ TIG K IT +++
Sbjct: 12 KIIILGDSGVGKTSLLNQYVTKQFSSQYKATIGADFMTKDITI-------------NDQQ 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +GHER+ + Y + + V D++ + L+ W E + G S P
Sbjct: 59 ISLQIWDTAGHERFASFGTAFYRGADVCMLVCDVTVAESFEHLEVWRKEFISGGNPSDPE 118
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQG 188
+ PYVVI NK D + R S D RQW G
Sbjct: 119 S--------FPYVVIANKND--CEPANRAVSS---DQLRQWCVTNG 151
>gi|15219943|ref|NP_173688.1| Ras-related protein Rab7 [Arabidopsis thaliana]
gi|3914521|sp|O04157.1|RAG3B_ARATH RecName: Full=Ras-related protein RABG3b; Short=AtRABG3b; AltName:
Full=Ras-related protein Rab75; Short=AtRab75
gi|2065015|emb|CAA70951.1| GTP-binding protein Rab7 [Arabidopsis thaliana]
gi|2505866|emb|CAA72904.1| GTP-binding protein Rab7 [Arabidopsis thaliana]
gi|3287684|gb|AAC25512.1| Strong similaity to gb|Y09821 GTP-binding protein Rab7 from A.
thaliana. EST gb|T76449 comes from this gene
[Arabidopsis thaliana]
gi|15718416|dbj|BAB68375.1| AtRab75 [Arabidopsis thaliana]
gi|88193796|gb|ABD42987.1| At1g22740 [Arabidopsis thaliana]
gi|332192158|gb|AEE30279.1| Ras-related protein Rab7 [Arabidopsis thaliana]
Length = 203
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 29/169 (17%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ SQ T+G +T ++ D +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVN----NKFSQQYKATIGADFVT--------KELQID-DR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ ++ SL W E T + P
Sbjct: 56 LVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNHLKSFESLDNWHNEFLTRASPRDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQG 188
+A P++++GNK D+ G + +V AR+W ++G
Sbjct: 116 MA--------FPFILLGNKVDID------GGNSRVVSEKKAREWCAEKG 150
>gi|407410862|gb|EKF33148.1| hypothetical protein MOQ_002992 [Trypanosoma cruzi marinkellei]
Length = 201
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 20/184 (10%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
+++++VGDSG GK+SL++ V+ + + +QTIG G K + R
Sbjct: 9 IKLILVGDSGTGKSSLLHRFVEDTFSEQQAQTIGVEFGSKIVQLAG-------------R 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEI-ATSGTFSA 140
+++WD +G ERYK Y G + V+D++QR T S+ +W ++ +G
Sbjct: 56 KVKLQIWDTAGQERYKSVTRSYYRGAVGCLIVYDITQRSTYESVPQWLNDVRQLAGKDVV 115
Query: 141 PLASGGPGGLPVPYVVIGNKADVAAKEG------TRGSSGNLVDAARQWVEKQGLLPSSE 194
+ G L V N+A + A E T +SG V A V K GL ++E
Sbjct: 116 VMLIGNKSDLSDGRTVQHNEASLYALENGLLHFETSAASGEFVSEAFLKVAKTGLSMTAE 175
Query: 195 ELPL 198
E+ +
Sbjct: 176 EVNI 179
>gi|225442589|ref|XP_002284408.1| PREDICTED: ras-related protein Rab7 [Vitis vinifera]
gi|297743251|emb|CBI36118.3| unnamed protein product [Vitis vinifera]
Length = 207
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 88/210 (41%), Gaps = 46/210 (21%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADV----------------AAKEG------TRGSSGNLVDA 179
P+VV+GNK DV A +G T G V+A
Sbjct: 116 --------ENFPFVVLGNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEA 167
Query: 180 ARQWVEKQGLLPSSEE---LPLTESFPGGG 206
A Q + K L EE LP T GG
Sbjct: 168 AFQCIAKNALKNEPEEEIYLPDTIDVASGG 197
>gi|427787063|gb|JAA58983.1| Putative rab subfamily protein of small gtpase [Rhipicephalus
pulchellus]
Length = 208
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 26/157 (16%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GD GVGKT +V+ G R TIG +K +T ++G +
Sbjct: 12 KIVLIGDCGVGKTCVVHRFKSGMYVERHGNTIGVDFAMKTLT----------VEGKKVK- 60
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y NGVI V+D+++R + SL +W E+
Sbjct: 61 --LQIWDTAGQERFRTITQSYYRSANGVIIVYDITKRSSFLSLPRWVEEVRRY------- 111
Query: 143 ASGGPGGLPVPYVVIGNKADV-AAKEGTRGSSGNLVD 178
G VP +++GNK D + +E T+ + L D
Sbjct: 112 -----TGSNVPLLLVGNKCDCESLREVTQEEAQALAD 143
>gi|326666553|ref|XP_692779.5| PREDICTED: ras and EF-hand domain-containing protein [Danio rerio]
Length = 773
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 78/172 (45%), Gaps = 32/172 (18%)
Query: 13 LNGGPPTGQV-------RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITY 65
L GP G +V++VG+S VGKT+L+ G S S T+G V+ +
Sbjct: 571 LQQGPTEGATASPQRLFKVILVGNSSVGKTALLRRFCDGQFHSATSATVGIDYSVRTLNL 630
Query: 66 GSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSL 125
G S + ++LWD +G ERY+ + + +GV+ ++D++ + +S+
Sbjct: 631 GDSHVA-------------LQLWDTAGQERYRSITKQFFRKADGVVVIYDITMEDSFSSV 677
Query: 126 QKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV 177
+ W I + G P+P +++GNK+D + + +L+
Sbjct: 678 RPWLSSIQEA------------VGDPIPVMLLGNKSDKENEREVQTKEADLL 717
>gi|147828269|emb|CAN75406.1| hypothetical protein VITISV_010510 [Vitis vinifera]
Length = 207
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
P+VV+GNK DV G + +V A+ W +G +P E
Sbjct: 116 --------ENFPFVVLGNKIDV------DGGNSRVVSEKKAKAWCASKGNIPYFE 156
>gi|15230211|ref|NP_188512.1| Ras-related protein Rab-7A [Arabidopsis thaliana]
gi|75273925|sp|Q9LS94.1|RAG3F_ARATH RecName: Full=Ras-related protein RABG3f; Short=AtRABG3f; AltName:
Full=Ras-related protein Rab71; Short=AtRab71; AltName:
Full=Ras-related protein Rab7B; Short=AtRab7B
gi|9293907|dbj|BAB01810.1| RAS-related GTP-binding protein [Arabidopsis thaliana]
gi|14334928|gb|AAK59641.1| putative GTP binding protein [Arabidopsis thaliana]
gi|15718408|dbj|BAB68371.1| AtRab71 [Arabidopsis thaliana]
gi|16323368|gb|AAL15178.1| putative GTP binding protein [Arabidopsis thaliana]
gi|332642631|gb|AEE76152.1| Ras-related protein Rab-7A [Arabidopsis thaliana]
Length = 206
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 27/174 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD-AARQWVEKQGLLPSSE 194
P+V+IGNK DV G+S + + A+ W +G +P E
Sbjct: 116 --------ENFPFVLIGNKVDV-----DDGNSRVVSEKKAKAWCASKGNIPYFE 156
>gi|149944729|ref|NP_001092564.1| ras-related protein Rab-7L1 [Bos taurus]
gi|426239399|ref|XP_004013609.1| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Ovis aries]
gi|148745251|gb|AAI42253.1| RAB7L1 protein [Bos taurus]
gi|296479392|tpg|DAA21507.1| TPA: RAB7, member RAS oncogene family-like 1 [Bos taurus]
Length = 203
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + DSE
Sbjct: 9 KVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWS-----------DSEM- 56
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ QKW ++ + T
Sbjct: 57 VRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQKWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G PVP +++ NK D++
Sbjct: 113 ----PNGEPVPCLLLANKCDLS 130
>gi|440793724|gb|ELR14900.1| Rab7/RabGfamily small GTPase [Acanthamoeba castellanii str. Neff]
Length = 205
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 76/173 (43%), Gaps = 27/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL++ V ++ TIG K + +
Sbjct: 8 LKVILLGDSGVGKTSLMDRYVNKKYSAQYKATIGADFLTKEVEVDGKLVT---------- 57
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ + Y + I V D++ ++ SL W E F
Sbjct: 58 ---LQIWDTAGQERFQSLGNSFYRGADCCILVFDVTVAKSFESLDNWRNE------FLVQ 108
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
A GGP P+VV+GNK D K SGN W + G +P E
Sbjct: 109 AAVGGPEHF--PFVVLGNKVDQEDKRTVSARSGN------AWCREHGDVPFYE 153
>gi|167395260|ref|XP_001741296.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165894193|gb|EDR22255.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 207
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 74/166 (44%), Gaps = 26/166 (15%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GDSGVGKTSL+N V S+ TIG K IT +++
Sbjct: 12 KIIILGDSGVGKTSLLNQYVTKQFSSQYKATIGADFMTKDITI-------------NDQQ 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +GHER+ + Y + + V D++ + L+ W E + G S P
Sbjct: 59 ISLQIWDTAGHERFASFGTAFYRGADVCMLVCDVTVAESFEHLEVWRKEFISGGNPSDPE 118
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQG 188
+ PYVVI NK D + R S D RQW G
Sbjct: 119 S--------FPYVVIANKND--CEPANRAVSS---DQLRQWCITNG 151
>gi|326494438|dbj|BAJ90488.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 206
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
P+V++GNK DV G + +V A+ W +G +P E
Sbjct: 116 --------DNFPFVLLGNKVDV------DGGNSRVVSEKKAKAWCASKGNIPYFE 156
>gi|167388366|ref|XP_001738539.1| rab17 [Entamoeba dispar SAW760]
gi|165898208|gb|EDR25141.1| rab17, putative [Entamoeba dispar SAW760]
Length = 209
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 99/239 (41%), Gaps = 46/239 (19%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
Q++++V+G+ VGKTS + G TIG VK T E
Sbjct: 9 QLKIIVIGEPSVGKTSTIRKYCHGVFDQLYRATIGVDFAVKFTTV-------------DE 55
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
RD + LWDI+G E+Y + Y+ +G I ++DL+ T + +W ++ F+
Sbjct: 56 RDVELRLWDIAGQEKYIAMTRVYYNGAHGAIIMYDLTNPDTFAATDRWKEDLENKVKFNE 115
Query: 141 PLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTE 200
+P +++GNKAD ++E + +L+ + G+L S
Sbjct: 116 Q---------SIPALLVGNKADCLSEEELNKAQEDLMAKVAEQKYSDGILTS-------- 158
Query: 201 SFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEM---PAPNPWSISPTHKPIQR 256
AK +EA+ K R++ ++ FSD + P N IS + Q+
Sbjct: 159 -----------AKSGLAVEEAMAKITRLIFKQ--FSDLVNPKPDANNVDISKQGQQTQK 204
>gi|432852413|ref|XP_004067235.1| PREDICTED: ras-related protein Rab-27A-like isoform 1 [Oryzias
latipes]
Length = 220
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 95/233 (40%), Gaps = 33/233 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++ L +GDSGVGKTS + G S+ T+G K + + +GS S KG +
Sbjct: 10 IKFLALGDSGVGKTSFLYQYTDGKFNSKFITTVGIDFREKTVLFPPTGSGGTSSKG---Q 66
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ + + G + + DL+ ++ +++ W ++ P
Sbjct: 67 KIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWMSQLQMHAYCENP 126
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
V+ GNK D+ + D AR+ EK G +P E+
Sbjct: 127 -----------DVVLCGNKCDLMDQRAISE------DEARELAEKYG-------IPYFET 162
Query: 202 FPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAPNPWSISPTHKPI 254
G + A R + +M+ + + + D PN P H+ I
Sbjct: 163 SAANGQNVTEA--VRILLDLIMRRMEHCVDKSWIPDGTVRPN----GPNHQDI 209
>gi|357468399|ref|XP_003604484.1| Ras-related protein Rab7 [Medicago truncatula]
gi|217075638|gb|ACJ86179.1| unknown [Medicago truncatula]
gi|355505539|gb|AES86681.1| Ras-related protein Rab7 [Medicago truncatula]
gi|388494386|gb|AFK35259.1| unknown [Medicago truncatula]
Length = 207
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNHWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
P+VV+GNK DV G + +V A+ W +G +P E
Sbjct: 116 --------ENFPFVVLGNKIDV------DGGNSRVVSEKKAKAWCASKGNIPYFE 156
>gi|193713749|ref|XP_001945092.1| PREDICTED: ras-related protein Rab-43-like isoform 1 [Acyrthosiphon
pisum]
gi|328718639|ref|XP_003246535.1| PREDICTED: ras-related protein Rab-43-like isoform 2 [Acyrthosiphon
pisum]
Length = 235
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 98/227 (43%), Gaps = 54/227 (23%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GD G GKT +V G+ TIG +K +IK D ++
Sbjct: 39 KIVLIGDCGTGKTCVVQRFKSGTYAENQGNTIGVDFSMK------------TIKIDGKK- 85
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +GHER++ Y NGV+ V+D+++R T +LQ+W E+ + + L
Sbjct: 86 VKLQIWDTAGHERFRTITQSYYRSANGVLLVYDITKRATFLNLQRWVEEVRRYTSSNVLL 145
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTESF 202
V+IGNK D +E+ + SE + E F
Sbjct: 146 ------------VLIGNKCD---------------------LEENRQVELSEADAMCEYF 172
Query: 203 PGGGGLI-AAAKEARYDKEAVMKFFRMLIRRR----YFSDEMPAPNP 244
P ++ +AKE + +EA + L RR + DE PNP
Sbjct: 173 PELLSVLETSAKENKNIEEAFVTIASELKRRHDQSAHIEDE---PNP 216
>gi|440302747|gb|ELP95054.1| GTP-binding protein YPTC5, putative [Entamoeba invadens IP1]
Length = 206
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++++++GDSGVGK+SL+N ++ + ++ TIG K ++ + +
Sbjct: 10 LKMILIGDSGVGKSSLMNQFIEKTFTAQYKATIGADFLTKEVSINGTAVT---------- 59
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +GHE++ + Y + + V D++ ++ SL W E + P
Sbjct: 60 ---LQIWDTAGHEKFMSFGAAFYRGSDCCLLVLDVTNEQSFKSLDTWKKEFLNGANVTNP 116
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+ NK D + T V+A +QW E G +P E
Sbjct: 117 --------KDFPFVVLINKMDEDPSKHTVN-----VNAVKQWCENNGAIPYYE 156
>gi|291227653|ref|XP_002733795.1| PREDICTED: lightoid-like [Saccoglossus kowalevskii]
Length = 217
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 21/160 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+GD G GKTS++ V TIG +K I + D++
Sbjct: 13 KVLVIGDLGTGKTSVIKRYVHQFFSQHYRATIGVDFALKVINW------------DADTL 60
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++QKW ++ +
Sbjct: 61 IRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRASTFEAVQKWKNDLDSKVQL---- 116
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQ 182
P G +P V++ NK D AKEG ++ + D ++
Sbjct: 117 ----PNGQNIPVVLLANKCD-QAKEGLVNNASQMDDYCKE 151
>gi|219887285|gb|ACL54017.1| unknown [Zea mays]
gi|413949817|gb|AFW82466.1| hypothetical protein ZEAMMB73_831449 [Zea mays]
Length = 206
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLHNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
P+V++GNK DV G + +V A+ W +G +P E
Sbjct: 116 --------DNFPFVLLGNKVDV------DGGNSRVVSEKKAKAWCASKGNIPYFE 156
>gi|340720074|ref|XP_003398468.1| PREDICTED: ras-related protein Rab-32-like [Bombus terrestris]
Length = 219
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 20/141 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+ LV+GD GVGKT+LV +G S TIG +K + + D
Sbjct: 25 KFLVIGDYGVGKTALVRRYTEGRFTSNYKITIGADFAIKAVDW------------DRFTK 72
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWD++GHER+ + Y V D+S+ T S++KW ++ TF
Sbjct: 73 INLQLWDVAGHERFGYMTRVYYKYAVAAALVFDISRIATFQSIKKWLSDLREKVTF---- 128
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
P G +P V++ NK D+
Sbjct: 129 ----PDGSEIPVVLLANKCDI 145
>gi|123401357|ref|XP_001301845.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121883074|gb|EAX88915.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 179
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 34/174 (19%)
Query: 17 PPTGQVRVLVVGDSGVGKTSLVN-LIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSI 75
P G+++VL++GD GKT L+N + S S+ + TIG + I S +
Sbjct: 10 PTLGKMKVLLIGDQSTGKTCLLNKYLAPDSGLSKTTPTIGIDYSSQRIDVDGSPT----- 64
Query: 76 KGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATS 135
++ WD+SG++ Y + R+ Y + NG I V DL+ R++ +LQKW I
Sbjct: 65 --------YIHYWDLSGNDLYTEVRNEFYPEANGFILVFDLTNRQSFDNLQKW---IDEG 113
Query: 136 GTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGL 189
++A + V+IG K+D GS D A +W K G+
Sbjct: 114 VKYNADWLTS---------VLIGTKSD--------GSVAVTNDEAGKWATKHGI 150
>gi|357132966|ref|XP_003568099.1| PREDICTED: ras-related protein Rab7-like isoform 1 [Brachypodium
distachyon]
Length = 206
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD--AARQWVEKQGLLPSSE 194
P+V++GNK DV G + +V A+ W +G +P E
Sbjct: 116 --------DNFPFVLLGNKVDV------DGGNSRVVSEKKAKAWCASKGNIPYFE 156
>gi|326437216|gb|EGD82786.1| small GTP binding protein Rab9 [Salpingoeca sp. ATCC 50818]
Length = 201
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 27/176 (15%)
Query: 19 TGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGD 78
T V+V+++GD VGK+SL+ V+ S TIG V K + GS +
Sbjct: 5 TRMVKVILLGDGSVGKSSLMQQFVRNEFNSESFHTIGVEVLNKDVRVGSEAIT------- 57
Query: 79 SERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTF 138
+++WD +G ER++ R+ Y + + DL+ + ++ W E +
Sbjct: 58 ------MQIWDTAGQERFRSLRTPFYRGADCCMLTFDLTDPNSFNNINMWRDEFLKHASV 111
Query: 139 SAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
A P++++GNKAD+A + +AAR W + G +P E
Sbjct: 112 DDVAA--------FPFLLLGNKADLAEQRQVTA------EAARAWCRENGNVPYYE 153
>gi|357132958|ref|XP_003568095.1| PREDICTED: ras-related protein Rab7-like isoform 1 [Brachypodium
distachyon]
Length = 206
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
P+V++GNK DV G + +V A+ W +G +P E
Sbjct: 116 --------DNFPFVLLGNKVDV------DGGNSRVVSEKKAKAWCASKGNIPYFE 156
>gi|293332671|ref|NP_001169258.1| uncharacterized protein LOC100383121 [Zea mays]
gi|242088493|ref|XP_002440079.1| hypothetical protein SORBIDRAFT_09g025620 [Sorghum bicolor]
gi|223975857|gb|ACN32116.1| unknown [Zea mays]
gi|241945364|gb|EES18509.1| hypothetical protein SORBIDRAFT_09g025620 [Sorghum bicolor]
gi|413946071|gb|AFW78720.1| hypothetical protein ZEAMMB73_253903 [Zea mays]
gi|414591123|tpg|DAA41694.1| TPA: hypothetical protein ZEAMMB73_061376 [Zea mays]
Length = 206
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
P+V++GNK DV G + +V A+ W +G +P E
Sbjct: 116 --------DNFPFVLLGNKVDV------DGGNSRVVSEKKAKAWCASKGNIPYFE 156
>gi|194695376|gb|ACF81772.1| unknown [Zea mays]
Length = 214
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLHNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
P+V++GNK DV G + +V A+ W +G +P E
Sbjct: 116 --------DNFPFVLLGNKVDV------DGGNSRVVSEKKAKAWCASKGNIPYFE 156
>gi|3914557|sp|Q40787.1|RAB7_CENCI RecName: Full=Ras-related protein Rab7
gi|1155265|gb|AAA85273.1| possible apospory-associated protein [Cenchrus ciliaris]
Length = 206
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
P+V++GNK DV G + +V A+ W +G +P E
Sbjct: 116 --------DNFPFVLLGNKVDV------DGGNSRVVSEKKAKAWCASKGNIPYFE 156
>gi|410986335|ref|XP_003999466.1| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Felis catus]
Length = 203
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + S S ++
Sbjct: 9 KVLVVGDAAVGKTSLVQRYSQDSFNKHYKSTVGVDFALKVLQW----SDSEVVR------ 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T T+ Q+W ++ + T
Sbjct: 59 --LQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFTNSQRWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G PVP +++ NK D++
Sbjct: 113 ----PNGEPVPCLLLANKCDLS 130
>gi|328700247|ref|XP_001948288.2| PREDICTED: ras and EF-hand domain-containing protein homolog
[Acyrthosiphon pisum]
Length = 582
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 76/160 (47%), Gaps = 25/160 (15%)
Query: 12 ELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSS 71
++ GG P +++ GD+ VGKT ++ KG+ ++ T+G VK
Sbjct: 379 DMIGGDPERTYKIVFAGDAAVGKTCFIHRFCKGTFTTKLGSTLGVDFQVK---------- 428
Query: 72 SNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE 131
+I+ D +R+ ++LWD +G ER++ + + +GVI ++D++ R+ ++++W +
Sbjct: 429 --TIRVD-DRNVALQLWDTAGQERFRSITKAYFRRADGVILLYDVTNERSFINIRQWVLS 485
Query: 132 IATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRG 171
I PL + GNK D+ + +G
Sbjct: 486 ITEVADKQLPLC------------ICGNKLDLRREAELQG 513
>gi|307180723|gb|EFN68613.1| Ras-related protein Rab-32 [Camponotus floridanus]
Length = 219
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 20/143 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+ LV+GD GVGKT+LV +G S TIG +K ++ D
Sbjct: 26 KFLVIGDYGVGKTALVRRYTEGKFSSNYKITIGADFAIK------------TLDWDPHTK 73
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+GHER+ + Y V D+S+ T S++KW ++ T
Sbjct: 74 INLQLWDIAGHERFGYMTRVYYKYAVAAALVFDISRAATFQSMKKWLCDLREKITL---- 129
Query: 143 ASGGPGGLPVPYVVIGNKADVAA 165
P G +P +++ NK D++
Sbjct: 130 ----PNGSDIPIILLANKCDISV 148
>gi|115464893|ref|NP_001056046.1| Os05g0516600 [Oryza sativa Japonica Group]
gi|46575953|gb|AAT01314.1| putative GTP-binding protein Rab7a [Oryza sativa Japonica Group]
gi|113579597|dbj|BAF17960.1| Os05g0516600 [Oryza sativa Japonica Group]
gi|215767238|dbj|BAG99466.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767294|dbj|BAG99522.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632232|gb|EEE64364.1| hypothetical protein OsJ_19205 [Oryza sativa Japonica Group]
Length = 206
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
P+V++GNK DV G + +V A+ W +G +P E
Sbjct: 116 --------DNFPFVLLGNKVDV------DGGNSRVVSEKKAKAWCASKGNIPYFE 156
>gi|440295577|gb|ELP88489.1| hypothetical protein EIN_344190 [Entamoeba invadens IP1]
Length = 206
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 72/166 (43%), Gaps = 26/166 (15%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GDSGVGKTSL+N V S+ TIG K IT SS
Sbjct: 12 KIIILGDSGVGKTSLLNQYVTKQFSSQYKATIGADFMTKDITINEKQSS----------- 60
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +GHER+ + Y + + V D++ + L+ W E + G S P
Sbjct: 61 --LQIWDTAGHERFASFGTAFYRGADVCMLVCDVTVVESFEHLEVWRKEFISGGNPSDPE 118
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQG 188
PYVVI NK D + R S + RQW G
Sbjct: 119 T--------FPYVVIANKVD--CEPANRAVS---TEQLRQWCVTSG 151
>gi|255558462|ref|XP_002520256.1| protein phosphatase 2c, putative [Ricinus communis]
gi|223540475|gb|EEF42042.1| protein phosphatase 2c, putative [Ricinus communis]
Length = 571
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 40/168 (23%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGK+SL+ L ++F S TIG VKH+T G +
Sbjct: 15 KLLLIGDSGVGKSSLL-LSFTSNTFDDLSPTIGVDFKVKHVTIGG-------------KK 60
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEIATSGTFSAP 141
+ +WD +G ER++ S Y G+I V+D+++R T T+L WA EI T
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDC 120
Query: 142 LASGGPGGLPVPYVVIGNKAD------VAAKEGTRGSSGNLVDAARQW 183
+ +++GNK D V KEG ++ ARQ+
Sbjct: 121 IK-----------MLVGNKVDKESEIVVTKKEG--------IEFARQY 149
>gi|403344496|gb|EJY71594.1| GTP-binding protein [Oxytricha trifallax]
gi|403370683|gb|EJY85209.1| GTP-binding protein [Oxytricha trifallax]
Length = 246
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 34/186 (18%)
Query: 16 GPPTGQ------VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQ-TIGCTVGVKHITYGSS 68
PPT V+V+ +GDSGVGKTSL+ + + S F+ + TIG K +
Sbjct: 21 NPPTSMPEKKCFVKVVAIGDSGVGKTSLIQMF-EHSRFTEAFKPTIGADFSNKEV----- 74
Query: 69 GSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKW 128
SI G + +++WD +G ERY+ + Y + + +DLS + ++ +W
Sbjct: 75 -----SING---KIVTLQIWDTAGQERYQSLGTAFYRGADCCLIAYDLSNSSSFENITQW 126
Query: 129 AVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQG 188
G P P++++GNK D+A E +R S AA+++ ++ G
Sbjct: 127 KQSFMQKGMIVNPET--------FPFMIVGNKLDIA--EDSRQVSE---QAAKRYCQENG 173
Query: 189 LLPSSE 194
+P E
Sbjct: 174 NMPHVE 179
>gi|291408137|ref|XP_002720314.1| PREDICTED: RAB38 [Oryctolagus cuniculus]
Length = 210
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 21/143 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
V++LV+GD GVGKTS++ V +FS TIG +K + + D E
Sbjct: 10 VQLLVIGDLGVGKTSIIKRYVH-QNFSHYRATIGVDFALKVLHW------------DPET 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWDI+G ER+ + + Y ++ G V D+++ T ++ KW ++ + T
Sbjct: 57 VVRLQLWDIAGQERFGNMTRVYYREVMGAFIVFDVTRPATFEAVAKWKNDLDSKLTL--- 113
Query: 142 LASGGPGGLPVPYVVIGNKADVA 164
P G PV V++ NK D A
Sbjct: 114 -----PNGKPVSVVLLANKCDQA 131
>gi|115465131|ref|NP_001056165.1| Os05g0536900 [Oryza sativa Japonica Group]
gi|113579716|dbj|BAF18079.1| Os05g0536900 [Oryza sativa Japonica Group]
gi|215740455|dbj|BAG97111.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632372|gb|EEE64504.1| hypothetical protein OsJ_19355 [Oryza sativa Japonica Group]
Length = 206
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + TIG K + +R
Sbjct: 10 LKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLI-------------EDR 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ +R+ +L W E T + S P
Sbjct: 57 LVTLQIWDTAGQERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDP 116
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P++++GNK D+ A G R + A++W +G +P E
Sbjct: 117 --------KHFPFILLGNKIDIDA--GNRRAIPE--KKAKEWCVSKGNIPYFE 157
>gi|218197104|gb|EEC79531.1| hypothetical protein OsI_20631 [Oryza sativa Indica Group]
Length = 206
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+V++GNK DV + S A+ W +G +P E
Sbjct: 116 --------DNFPFVLLGNKVDVDSGNSRVVSE----KKAKAWCASKGNIPYFE 156
>gi|223996783|ref|XP_002288065.1| at-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
gi|220977181|gb|EED95508.1| at-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
Length = 197
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 90/190 (47%), Gaps = 26/190 (13%)
Query: 17 PPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIK 76
P ++L++GD+GVGK+S++ + TIG VKH+ ++ IK
Sbjct: 17 PYDHLFKLLMIGDAGVGKSSMLIRFTDDAFDEHIQSTIGVDFKVKHLEL-----NNKRIK 71
Query: 77 GDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
+ +WD +G ER++ S Y GV+ V+D+++R + +L++W E+
Sbjct: 72 --------LTVWDTAGQERFRTLTSSYYRGAQGVVMVYDVTRRDSFDNLEQWLKEVK--- 120
Query: 137 TFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLL----PS 192
+P + G G V +++GNK D+A +G+ A +W QG+L +
Sbjct: 121 -LYSP--NNGEG---VVKLLVGNKIDLADGDGSGYERQVDRHEAEEWARNQGMLFLEASA 174
Query: 193 SEELPLTESF 202
+ + ESF
Sbjct: 175 KTRMGVQESF 184
>gi|241124292|ref|XP_002404123.1| RAB-19, 41 and, putative [Ixodes scapularis]
gi|215493584|gb|EEC03225.1| RAB-19, 41 and, putative [Ixodes scapularis]
Length = 208
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 25/140 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GD GVGKT +V+ G R TIG +K +T ++G +
Sbjct: 12 KIVLIGDCGVGKTCVVHRFKSGMYVERHGNTIGVDFAMKTLT----------VEGKKVK- 60
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y NGVI V+D+++R + SL +W E+
Sbjct: 61 --LQIWDTAGQERFRTITQSYYRSANGVIIVYDITKRSSFLSLPRWVEEVRRY------- 111
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
G VP ++IGNK D
Sbjct: 112 -----TGSNVPLLLIGNKCD 126
>gi|417397029|gb|JAA45548.1| Putative gtp-binding protein-like ras superfamily [Desmodus
rotundus]
Length = 203
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + S S ++
Sbjct: 9 KVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQW----SDSEMVR------ 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ QKW ++ + T
Sbjct: 59 --LQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQKWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G PVP +++ NK D++
Sbjct: 113 ----PNGKPVPCLLLANKCDLS 130
>gi|148466386|gb|ABQ65168.1| Rab7 [Prosopis juliflora]
Length = 207
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNHWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
P+VV+GNK DV G + +V A+ W +G +P E
Sbjct: 116 --------ENFPFVVLGNKIDV------DGGNSRVVSEKKAKAWCASKGNIPYFE 156
>gi|332020863|gb|EGI61261.1| Ras-related protein Rab-32 [Acromyrmex echinatior]
Length = 218
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 20/152 (13%)
Query: 14 NGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSN 73
N G + LV+GD GVGKT+LV +G S TIG +K + +
Sbjct: 16 NFGHKEHLFKCLVIGDYGVGKTALVRRYTEGKFSSNYKITIGADFAIKTLDW-------- 67
Query: 74 SIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIA 133
D + ++LWDI+GHER+ + Y V D+S+ T S++KW ++
Sbjct: 68 ----DPQTKINLQLWDIAGHERFGYMTRVYYKYAVAAALVFDISRVATFQSMKKWLNDLR 123
Query: 134 TSGTFSAPLASGGPGGLPVPYVVIGNKADVAA 165
P G +P V++ NK D++
Sbjct: 124 EKVAL--------PDGSSIPVVLLANKCDISV 147
>gi|357608836|gb|EHJ66182.1| Rab-related protein [Danaus plexippus]
Length = 629
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 21/160 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+G+ G GKTS++ V TIG +K + + +N+I
Sbjct: 423 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNW-----DANTI------- 470
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++ T
Sbjct: 471 IRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVSRVATFDAVVKWKNDLDTKVQL---- 526
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQ 182
P G P+P +++ NK D KEG S G + + R+
Sbjct: 527 ----PDGSPIPCILLANKCD-QQKEGIVNSPGKMEEYCRE 561
>gi|357454943|ref|XP_003597752.1| Ras-related protein Rab7 [Medicago truncatula]
gi|355486800|gb|AES68003.1| Ras-related protein Rab7 [Medicago truncatula]
Length = 209
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 44/209 (21%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 11 LKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQV-------------EDR 57
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 58 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNHWREEFLIQASPSDP 117
Query: 142 LASGGPGGLPVPYVVIGNKADV----------------AAKEG------TRGSSGNLVDA 179
P+VV+GNK DV A +G T G V+A
Sbjct: 118 --------ENFPFVVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEA 169
Query: 180 ARQWVEKQGLLPS-SEELPLTESFPGGGG 207
A + + K L EEL + E+ GGG
Sbjct: 170 AFECITKNALKNEPEEELYMPETIDVGGG 198
>gi|440294326|gb|ELP87343.1| rab17, putative [Entamoeba invadens IP1]
Length = 209
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 100/227 (44%), Gaps = 42/227 (18%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
Q++++V+G+ VGKTS + G TIG VK + +
Sbjct: 9 QLKIIVIGEPSVGKTSTIKKYCHGVFDQLYRATIGVDFAVK-------------FEKVDD 55
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
++ + LWDI+G E+Y + Y+ +G I ++D++ T + KW ++ + F+
Sbjct: 56 KEVELRLWDIAGQEKYIAMTRVYYNGAHGAIIMYDVTAPNTFGATDKWKEDLESKVKFND 115
Query: 141 PLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTE 200
P+P +++GNKAD+ ++E + + + R VE+Q
Sbjct: 116 Q---------PIPALLVGNKADLLSEEEMKTAEKEM----RAKVEEQKY----------- 151
Query: 201 SFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAPNPWSI 247
G++ +AK ++A MK LI R+ PAP+P ++
Sbjct: 152 ----ADGILTSAKSGLAVEDA-MKKITHLIFERFKELSNPAPDPNNV 193
>gi|407406644|gb|EKF30877.1| small GTP-binding protein Rab18, putative [Trypanosoma cruzi
marinkellei]
Length = 223
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 14/154 (9%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDS-E 80
++V ++GDSGVGK+SL+ G+ S TIG VK + I D +
Sbjct: 9 IKVFLLGDSGVGKSSLMLSFASGTFDPDISSTIGIDFKVKTVEV---------IDADGVK 59
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
R+ + LWD +G ER++ S Y N V+ V+D+++ +T LQ+W E + F
Sbjct: 60 RNINIYLWDTAGQERFRTLTSSYYRGANAVVLVYDVNEPQTFHGLQRWMDE---ADVFCR 116
Query: 141 PLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSG 174
V Y++IGNK D EG+ G
Sbjct: 117 NNDENDEDNNAV-YLLIGNKIDKCVMEGSEKGEG 149
>gi|145531799|ref|XP_001451666.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419321|emb|CAK84269.1| unnamed protein product [Paramecium tetraurelia]
Length = 183
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 28/151 (18%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+ R++++GD VGKTS+++ + + + +QTI V ++H+ S+ + S
Sbjct: 21 EYRIVMLGDMSVGKTSILDRYINRNFSEKHNQTIA--VDLRHVQASSNITVS-------- 70
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
++ WD SG +++ + R Y N +I V DL+ R++ SL +W E
Sbjct: 71 ---YLNFWDFSGEQQFWNVRKEFYEDANMIILVFDLASRKSFNSLNEWTQE--------- 118
Query: 141 PLASGGPGGLPVPYVVIGNKAD---VAAKEG 168
+ G +P +V+GNK D ++ EG
Sbjct: 119 ---ANNMGATKLPVLVVGNKQDKRNISENEG 146
>gi|321478953|gb|EFX89909.1| hypothetical protein DAPPUDRAFT_39774 [Daphnia pulex]
Length = 175
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 20/145 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+V+++GD GVGKTS + V+ + TIG +K + + S + +IK
Sbjct: 17 KVIIIGDPGVGKTSFIRRYVQNAFRGDYKATIGVDFALKIVRW----SENQTIK------ 66
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + G I + DL+ R + + KW ++ +
Sbjct: 67 --LQLWDIAGQERFTWMTRVYYKEAQGCIIMFDLTSRNSFENAVKWKKDVDSKCVL---- 120
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKE 167
G PVP +++ NK D+ +E
Sbjct: 121 ----EDGAPVPCMLLANKCDLRQRE 141
>gi|302142732|emb|CBI19935.3| unnamed protein product [Vitis vinifera]
Length = 307
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 28/162 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGK++L+ L ++F S TIG VKH+ G +
Sbjct: 113 KLLLIGDSGVGKSTLL-LSFTSNTFEDLSPTIGVDFKVKHVNIGG-------------KK 158
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEIATSGTFSAP 141
+ +WD +G ER++ S Y GVI V+D+++R T T+L WA EI T
Sbjct: 159 LKLAIWDTAGQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDC 218
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQW 183
+ +++GNK D ++ G +D AR++
Sbjct: 219 IK-----------MLVGNKVDKESERVVTKKEG--IDFAREY 247
>gi|74005894|ref|XP_536104.2| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Canis lupus
familiaris]
Length = 203
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + S S ++
Sbjct: 9 KVLVVGDAAVGKTSLVQRYSQDSFQQHYKSTVGVDFALKVLQW----SDSEMVR------ 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + I + D++ T ++ Q+W ++ + T
Sbjct: 59 --LQLWDIAGQERFTSMTRLYYRDASACIIMFDVTNATTFSNSQRWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G PVP +++ NK D++
Sbjct: 113 ----PNGEPVPCLLLANKCDLS 130
>gi|331240467|ref|XP_003332884.1| Ras-like protein Rab7 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|331240475|ref|XP_003332888.1| Ras-like protein Rab7 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309311874|gb|EFP88465.1| Ras-like protein Rab7 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309311878|gb|EFP88469.1| Ras-like protein Rab7 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 237
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 90/211 (42%), Gaps = 31/211 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSS---------- 71
++V+++GDSGVGKTSL+N V ++ TIG K + S+ S+
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKRFSTQYKATIGADFLTKEVYIESNDSTTQPSSTNPQQ 68
Query: 72 -------SNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTS 124
S + S+R ++LWD +G ER++ Y + + V D++ ++ +
Sbjct: 69 APSSSVVSTNTNNGSDRVVTMQLWDTAGQERFQSLGVAFYRGADCCVLVFDVNSSKSFET 128
Query: 125 LQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWV 184
L W E + P P+VV+GNK DV +E R S A W
Sbjct: 129 LDSWRDEFLIQASPRDP--------DNFPFVVLGNKIDV--EENKRQVSQK---RAMSWC 175
Query: 185 EKQGLLPSSEELPLTESFPGGGGLIAAAKEA 215
+ +G +P E ES IAA + A
Sbjct: 176 QSKGNIPYF-ETSAKESINVEQSFIAACRNA 205
>gi|312088377|ref|XP_003145838.1| RAB family member [Loa loa]
gi|307758997|gb|EFO18231.1| Ras-like protein Rab-7a [Loa loa]
Length = 212
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 21/155 (13%)
Query: 15 GGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNS 74
GG ++V+++GDSGVGKTSL+N V ++ TIG K I+ G
Sbjct: 6 GGRKKALLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKDISVG-------- 57
Query: 75 IKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIAT 134
+R +++WD +G ER++ Y + + +D++ + SL+ W E
Sbjct: 58 -----DRTVTMQIWDTAGQERFQSLGVAFYRGADCCVLTYDITNASSFRSLESWRDEFLI 112
Query: 135 SGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGT 169
+ P P+V++GNK D+ AK
Sbjct: 113 QASPRDP--------EHFPFVLLGNKIDLEAKRAV 139
>gi|123504513|ref|XP_001328770.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736250|gb|AAX97454.1| small Rab GTPase Rab7b [Trichomonas vaginalis]
gi|121911717|gb|EAY16547.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 202
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 27/170 (15%)
Query: 19 TGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGD 78
T +V+V+GD+GVGKT+L++ V G + TIG K +T D
Sbjct: 7 TKTFKVVVLGDTGVGKTTLIHQFVNGEFIADFKATIGADFSSKIMTV------------D 54
Query: 79 SERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTF 138
+R ++++WD +G ER+ + Y + I V+D +Q + L W ++ F
Sbjct: 55 GQR-IYIQIWDTAGQERFHAVGATFYRGTDACILVYDCTQVESFHRLSFWREDL-----F 108
Query: 139 SAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQG 188
+ P P ++ NK+D+ +++ ++ ARQW E+ G
Sbjct: 109 TKSQMEPDP---KFPIIIFSNKSDLESQKQVN------IEDARQWAEQNG 149
>gi|327278637|ref|XP_003224067.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Anolis
carolinensis]
Length = 202
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 20/148 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VL++GD+ VGKTSLV S T+G +K + + S S +++
Sbjct: 3 KVLIIGDATVGKTSLVQRYANDSFNKHYKSTVGVDFALKVVQW----SDSETVR------ 52
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + + D++ T TS QKW ++ +
Sbjct: 53 --LQLWDIAGQERFTSMTRLYYKEASACVIMFDVTSVSTFTSCQKWKQDLDSKLRL---- 106
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTR 170
P G PVP +++ NK D+ TR
Sbjct: 107 ----PDGNPVPCLLLANKCDLYPWSVTR 130
>gi|224062966|ref|XP_002300952.1| predicted protein [Populus trichocarpa]
gi|222842678|gb|EEE80225.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 28/162 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGK++L+ L +F S TIG VKH+T G +
Sbjct: 16 KLLLIGDSGVGKSTLL-LSFTSKNFEDLSPTIGVDFKVKHVTIGG-------------KK 61
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEIATSGTFSAP 141
+ +WD +G ER++ S Y G+I V+D+++R T T+L + WA EI T
Sbjct: 62 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEIWAKEIDLYSTNQDC 121
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQW 183
+ +++GNK D ++ G +D AR++
Sbjct: 122 IK-----------MLVGNKVDKESERVVTKKEG--IDFAREY 150
>gi|241030850|ref|XP_002406512.1| GTP-binding protein RAB-32, putative [Ixodes scapularis]
gi|215491988|gb|EEC01629.1| GTP-binding protein RAB-32, putative [Ixodes scapularis]
Length = 228
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 21/160 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD G GKTS++ V TIG +K I + D
Sbjct: 26 KILVIGDLGTGKTSIIKRYVHQFFSHHYRATIGVDFALKVINW------------DENTL 73
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ +T +++KW +++ +
Sbjct: 74 IRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSQTFEAVKKWKMDLDSK------- 126
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQ 182
P G +P V++GNK D+ +KEG SS + + ++
Sbjct: 127 -VQQPEGNSIPCVLLGNKCDM-SKEGIVNSSSAMNEFCKE 164
>gi|15218194|ref|NP_175638.1| RAB GTPase homolog G3D [Arabidopsis thaliana]
gi|297852978|ref|XP_002894370.1| hypothetical protein ARALYDRAFT_474344 [Arabidopsis lyrata subsp.
lyrata]
gi|75169431|sp|Q9C820.1|RAG3D_ARATH RecName: Full=Ras-related protein RABG3d; Short=AtRABG3d; AltName:
Full=Ras-related protein Rab72; Short=AtRab72
gi|12323132|gb|AAG51552.1|AC037424_17 GTP-binding protein RAB7D, putative; 63624-64923 [Arabidopsis
thaliana]
gi|15718410|dbj|BAB68372.1| AtRab72 [Arabidopsis thaliana]
gi|18389228|gb|AAL67057.1| putative GTP-binding protein RAB7D [Arabidopsis thaliana]
gi|20465885|gb|AAM20047.1| putative GTP-binding protein RAB7D [Arabidopsis thaliana]
gi|297340212|gb|EFH70629.1| hypothetical protein ARALYDRAFT_474344 [Arabidopsis lyrata subsp.
lyrata]
gi|332194656|gb|AEE32777.1| RAB GTPase homolog G3D [Arabidopsis thaliana]
Length = 206
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 25/173 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQI-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 IFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+GNK DV + S A+ W +G +P E
Sbjct: 116 --------ENFPFVVLGNKTDVDGGKSRVVSE----KKAKAWCASKGNIPYFE 156
>gi|222641954|gb|EEE70086.1| hypothetical protein OsJ_30082 [Oryza sativa Japonica Group]
Length = 260
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 30/170 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+V+VVGDS VGKT L+ K F TIG + ++ +K
Sbjct: 24 KVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSL-----HRKRVKA----- 73
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++WD +G ERY+ S Y G + V+D+++RRT ++ +W E+ S +
Sbjct: 74 ---QIWDTAGQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVV 130
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPS 192
A +IGNKAD+ A G D A ++ E+QGL S
Sbjct: 131 A------------LIGNKADMPA-----GRREVAADEAARFAEEQGLFFS 163
>gi|412985742|emb|CCO16942.1| unknown [Bathycoccus prasinos]
Length = 206
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 22/142 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++++++GDSGVGKTSL+N V FS+ + T+G +T +K D E
Sbjct: 9 LKLIILGDSGVGKTSLMNQYV-NRKFSKQYKA---TIGADFLT--------KEVKIDDEN 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ R+ +L+ W E
Sbjct: 57 LVTMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNNERSFQNLENWREEF--------- 107
Query: 142 LASGGPGGLP-VPYVVIGNKAD 162
LA P P++V+GNK D
Sbjct: 108 LAQASPADAENFPFIVLGNKTD 129
>gi|350408446|ref|XP_003488406.1| PREDICTED: ras-related protein Rab-32-like [Bombus impatiens]
Length = 219
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 20/143 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+ LV+GD GVGKT+LV +G S TIG +K + + D
Sbjct: 25 KFLVIGDYGVGKTALVRRYTEGRFTSNYKITIGADFAIKAVDW------------DRFTK 72
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWD++GHER+ + Y V D+S+ T S++KW ++ T
Sbjct: 73 INLQLWDVAGHERFGYMTRVYYKYAVAAALVFDISRIATFQSIKKWLCDLREKVTL---- 128
Query: 143 ASGGPGGLPVPYVVIGNKADVAA 165
P G +P V++ NK D++
Sbjct: 129 ----PDGSEIPVVLLANKCDISC 147
>gi|410074687|ref|XP_003954926.1| hypothetical protein KAFR_0A03560 [Kazachstania africana CBS 2517]
gi|372461508|emb|CCF55791.1| hypothetical protein KAFR_0A03560 [Kazachstania africana CBS 2517]
Length = 207
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 26/172 (15%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
Q +++++GDS VGK+S+VN VK S TIG + I +G E
Sbjct: 3 QFKLVLLGDSSVGKSSIVNRFVKDSFEDLRESTIGAAFLSQTIKLNDNGK---------E 53
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
E+WD +G ERYK + Y N + V+D+++ + + W E+
Sbjct: 54 VIVKFEIWDTAGQERYKSLAPMYYRNANAALVVYDITELDSLNKAKTWVEELKNK----- 108
Query: 141 PLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLL 190
G + ++GNK DV K+ SS LV + A+++ ++QGLL
Sbjct: 109 ------VGDDNIVIYLVGNKLDVCEKD----SSKRLVSLEGAKEYAKEQGLL 150
>gi|212545308|ref|XP_002152808.1| ras-like GTP-binding protein, putative [Talaromyces marneffei ATCC
18224]
gi|210065777|gb|EEA19871.1| ras-like GTP-binding protein, putative [Talaromyces marneffei ATCC
18224]
Length = 314
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 12/150 (8%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+ +++V+G GVGKTSLVN VK S P++ I TVG +T ++S++I
Sbjct: 6 EAKIVVLGSQGVGKTSLVNRYVKNSF--EPAK-ITSTVGASFVTKRVLDTTSDTI----- 57
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
+++WD +G ER++ + Y N + +D++ + + W E+ + S
Sbjct: 58 --VRLQIWDTAGQERFRSISRLYYRGANACLLCYDITDENSFKEMTGWLQELKQNLGHSN 115
Query: 141 PLASGGPGGLPVPYVVIGNKADVAAKEGTR 170
+ +GG P+ V+G K+D+ A E +R
Sbjct: 116 DVGAGGDS--PLVIHVVGTKSDIVALEPSR 143
>gi|71410421|ref|XP_807505.1| ras-related rab-4 [Trypanosoma cruzi strain CL Brener]
gi|70871523|gb|EAN85654.1| ras-related rab-4, putative [Trypanosoma cruzi]
Length = 201
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 20/184 (10%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
+++++VGDSG GK+SL++ V+ + + +QTIG G K + R
Sbjct: 9 IKLILVGDSGTGKSSLLHRFVEDTFSEQQAQTIGVEFGSKIVQLAG-------------R 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEI-ATSGTFSA 140
+++WD +G ERYK Y G + V+D++QR T S+ +W ++ +G
Sbjct: 56 KVKLQIWDTAGQERYKSVTRSYYRGAVGCLIVYDITQRSTYESVPQWLNDVRQLAGKDVV 115
Query: 141 PLASGGPGGLPVPYVVIGNKADVAAKEG------TRGSSGNLVDAARQWVEKQGLLPSSE 194
+ G L V N+A + + E T +SG V A V K GL ++E
Sbjct: 116 VMLIGNKSDLSDGRTVQHNEASLYSLENGLLHFETSAASGEFVSEAFLKVAKTGLSMTAE 175
Query: 195 ELPL 198
E+ +
Sbjct: 176 EVNI 179
>gi|193206686|ref|NP_001122804.1| Protein Y116A8C.10, isoform b [Caenorhabditis elegans]
gi|85539321|emb|CAB55148.2| Protein Y116A8C.10, isoform b [Caenorhabditis elegans]
Length = 248
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 13/155 (8%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GDS VGKTSL + I G ++ T+G + + +R
Sbjct: 10 KILVLGDSCVGKTSLCHCIAGGGEPPGGGRSFDSTIGATVVMAWHEYRAGTP----EQRT 65
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+ELWDI G ++ + + G I VHDL+ +R++ +L W + +AP
Sbjct: 66 ELLELWDIGGMVAHRQAAQVFFEGAVGAILVHDLTNKRSEENLATWLTMLDGKPRGAAPK 125
Query: 143 ASGGPGGLP---------VPYVVIGNKADVAAKEG 168
+S P + +P +++G KAD+ +G
Sbjct: 126 SSKDPAAVALKVDIESCNIPVLIVGTKADLVPHKG 160
>gi|406602416|emb|CCH46032.1| hypothetical protein BN7_5619 [Wickerhamomyces ciferrii]
Length = 205
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 26/170 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+ V G ++ TIG K +T +
Sbjct: 9 LKVIILGDSGVGKTSLMQQFVNGKFSNQYKATIGADFLTKELTIDDKSVT---------- 58
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ +++ ++ W E P
Sbjct: 59 ---MQLWDTAGQERFQSLGVAFYRGADCCVLVYDVTNQKSFENISLWKDEFLIQANVKNP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLP 191
P+V+IGNK DV + + A+Q+ G LP
Sbjct: 116 --------ENFPFVIIGNKVDVDENKKVINNK-----KAQQFANNLGNLP 152
>gi|289741111|gb|ADD19303.1| Rab-related protein 3 [Glossina morsitans morsitans]
Length = 219
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 72/141 (51%), Gaps = 25/141 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GD+G GKT +V G+ R TIG +K I +++G +
Sbjct: 23 KIVLIGDAGTGKTCIVERFKTGNFIERQGNTIGVDFSMKTI----------NVEGKLVK- 71
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y NGVI V+D+++R T +LQKW E+ ++A
Sbjct: 72 --LQIWDTAGQERFRTITQSYYRSANGVIIVYDVTRRDTFANLQKWIEEVR---HYTAS- 125
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
V +++GNK+D+
Sbjct: 126 --------NVMLILVGNKSDL 138
>gi|407850237|gb|EKG04694.1| hypothetical protein TCSYLVIO_004244 [Trypanosoma cruzi]
Length = 201
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 20/184 (10%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
+++++VGDSG GK+SL++ V+ + + +QTIG G K + R
Sbjct: 9 IKLILVGDSGTGKSSLLHRFVEDTFSEQQAQTIGVEFGSKIVQLAG-------------R 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEI-ATSGTFSA 140
+++WD +G ERYK Y G + V+D++QR T S+ +W ++ +G
Sbjct: 56 KVKLQIWDTAGQERYKSVTRSYYRGAVGCLIVYDITQRSTYESVPQWLNDVRQLAGKDVV 115
Query: 141 PLASGGPGGLPVPYVVIGNKADVAAKEG------TRGSSGNLVDAARQWVEKQGLLPSSE 194
+ G L V N+A + + E T +SG V A V K GL ++E
Sbjct: 116 VMLIGNKSDLSDGRTVQHNEASLYSLENGLLHFETSAASGEFVSEAFLKVAKTGLSMTAE 175
Query: 195 ELPL 198
E+ +
Sbjct: 176 EVNI 179
>gi|395838749|ref|XP_003792270.1| PREDICTED: ras-related protein Rab-7L1 [Otolemur garnettii]
Length = 204
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + DSE
Sbjct: 9 KVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWS-----------DSEM- 56
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ Q+W ++ + T
Sbjct: 57 VRLQLWDIAGQERFTSMTRLYYKDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G PVP +++ NK D++
Sbjct: 113 ----PNGEPVPCLLLANKCDLS 130
>gi|358256530|dbj|GAA49935.1| Ras and EF-hand domain-containing protein homolog [Clonorchis
sinensis]
Length = 321
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 95/206 (46%), Gaps = 31/206 (15%)
Query: 17 PPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIK 76
PP +++++GD+GVGK+S ++ + R S T+G ++I S
Sbjct: 125 PPERIFKIILIGDTGVGKSSFMHQFCDHVFYPRLSATVGVDFRTRNIRVDKYVYS----- 179
Query: 77 GDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
++LWD +G E+Y+ + +++GVI V+D++ ++ +++ W +I+ G
Sbjct: 180 --------IQLWDTAGQEKYRSIVRTYFRKVDGVIIVYDVTAPQSFRNVRSWMDQISEFG 231
Query: 137 TFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
+ VP +V+GNK D+ + SGN V + + + E G++
Sbjct: 232 SEQ-----------KVPVIVVGNKIDLR-----KMGSGNCVTTEMGKTFAETYGVMFLET 275
Query: 195 ELPLTESFPGGGGLIAAAKEARYDKE 220
+ +E+ L+A+ + D +
Sbjct: 276 SVCTSENVDEAVRLLASKMKVEQDAQ 301
>gi|110430656|gb|ABG73446.1| Ras-related protein Rab11B [Oryza brachyantha]
Length = 248
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 30/170 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+V+VVGDS VGKT L+ K F TIG + +T +K
Sbjct: 32 KVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLTL-----HRKRVKA----- 81
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++WD +G ERY+ S Y G + V+D+++RRT ++ +W E+ S +
Sbjct: 82 ---QIWDTAGQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVV 138
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPS 192
A +IGNKAD+ A + D A ++ E+QGL S
Sbjct: 139 A------------LIGNKADMPASRREVAA-----DEAARFAEEQGLFFS 171
>gi|431892885|gb|ELK03313.1| Ras-related protein Rab-7L1 [Pteropus alecto]
Length = 203
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + DSE
Sbjct: 9 KVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWS-----------DSEM- 56
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ Q+W ++ + T
Sbjct: 57 VRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G PVP +++ NK D++
Sbjct: 113 ----PNGEPVPCLLLANKCDLS 130
>gi|51859426|gb|AAH81732.1| Rab7l1 protein [Rattus norvegicus]
Length = 167
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 71/142 (50%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + S S ++
Sbjct: 9 KVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQW----SDSEMVR------ 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ Q+W ++ + T
Sbjct: 59 --LQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G PVP +++ NK+D++
Sbjct: 113 ----PSGEPVPCLLLANKSDLS 130
>gi|149707806|ref|XP_001490786.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Equus
caballus]
Length = 203
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + DSE
Sbjct: 9 KVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWS-----------DSEM- 56
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ Q+W ++ + T
Sbjct: 57 VRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G PVP +++ NK D++
Sbjct: 113 ----PNGEPVPCLLLANKCDLS 130
>gi|29293694|gb|AAO67728.1| small GTP binding protein [Oryza sativa Indica Group]
Length = 206
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GD+GVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDTGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+V++GNK DV + S A+ W +G +P E
Sbjct: 116 --------DNFPFVLLGNKVDVDSGNSRVVSE----KKAKAWCASKGNIPYFE 156
>gi|403294870|ref|XP_003938385.1| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 203
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + S S ++
Sbjct: 9 KVLVVGDAAVGKTSLVQRYCQDSFSKHYKSTVGVDFALKVLQW----SDSEIVR------ 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ Q+W ++ + T
Sbjct: 59 --LQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G PVP +++ NK D++
Sbjct: 113 ----PNGEPVPCLLLANKCDLS 130
>gi|432116090|gb|ELK37217.1| Ras-related protein Rab-7L1 [Myotis davidii]
Length = 203
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + S S ++
Sbjct: 9 KVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQW----SDSEMVR------ 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ Q+W ++ + T
Sbjct: 59 --LQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G PVP +++ NK D++
Sbjct: 113 ----PNGEPVPCLLLANKCDLS 130
>gi|19424290|ref|NP_598274.1| ras-related protein Rab-7L1 [Rattus norvegicus]
gi|81910561|sp|Q63481.1|RAB7L_RAT RecName: Full=Ras-related protein Rab-7L1; AltName: Full=Rab-7-like
protein 1; AltName: Full=Ras-related protein Rab-29
gi|1235593|emb|CAA65444.1| GTPase [Rattus norvegicus]
gi|149058655|gb|EDM09812.1| RAB7, member RAS oncogene family-like 1, isoform CRA_a [Rattus
norvegicus]
gi|149058656|gb|EDM09813.1| RAB7, member RAS oncogene family-like 1, isoform CRA_a [Rattus
norvegicus]
Length = 204
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + DSE
Sbjct: 9 KVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWS-----------DSEM- 56
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ Q+W ++ + T
Sbjct: 57 VRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G PVP +++ NK+D++
Sbjct: 113 ----PSGEPVPCLLLANKSDLS 130
>gi|297809149|ref|XP_002872458.1| AtRABG3a [Arabidopsis lyrata subsp. lyrata]
gi|297318295|gb|EFH48717.1| AtRABG3a [Arabidopsis lyrata subsp. lyrata]
Length = 206
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 34/188 (18%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + TIG K + G E+
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIG-------------EK 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ + Y + V+D++ R+ +L+ W E + S P
Sbjct: 56 LVTLQIWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD--AARQWVEKQGLLP-----SSE 194
P++V+GNK DV G S +V A W G +P + E
Sbjct: 116 KT--------FPFIVLGNKVDV------DGGSSRVVSEKKAADWCASNGNIPYFETSAKE 161
Query: 195 ELPLTESF 202
+ + E+F
Sbjct: 162 DFNVDEAF 169
>gi|156087801|ref|XP_001611307.1| Rab7 [Babesia bovis]
gi|154798561|gb|EDO07739.1| Rab7 [Babesia bovis]
Length = 233
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 98/241 (40%), Gaps = 44/241 (18%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++++++GDSGVGKTSL+N + ++ TIG + +T ++
Sbjct: 26 LKIIILGDSGVGKTSLMNQFINKRFTNQYRATIGADFSTQEVTV-------------DDK 72
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D + ++T S++ W E F
Sbjct: 73 VVTLQIWDTAGQERFQSLGKAFYRGADCCMLVYDTTNQKTFESIESWKSE------FLIQ 126
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
+ P P+ +IGNK D A R S N A W + +P E
Sbjct: 127 VEPKDPESF--PFALIGNKVDDVAN---RKVSAN---KATNWCKANNDIPHFE------- 171
Query: 202 FPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAPNPWSISPTHKPIQRLDENS 261
+AK A+ A M+ + + R DE+ P+ + H +Q N
Sbjct: 172 --------TSAKTAQNVAAAFMEIAKKAVMRDTQDDEIYIPDTLLLDQRH--VQHTGNNC 221
Query: 262 S 262
S
Sbjct: 222 S 222
>gi|115480275|ref|NP_001063731.1| Os09g0527600 [Oryza sativa Japonica Group]
gi|52077324|dbj|BAD46365.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113631964|dbj|BAF25645.1| Os09g0527600 [Oryza sativa Japonica Group]
gi|125564446|gb|EAZ09826.1| hypothetical protein OsI_32116 [Oryza sativa Indica Group]
gi|215767070|dbj|BAG99298.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 239
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 30/170 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+V+VVGDS VGKT L+ K F TIG + ++ +K
Sbjct: 24 KVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSL-----HRKRVKA----- 73
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++WD +G ERY+ S Y G + V+D+++RRT ++ +W E+ S +
Sbjct: 74 ---QIWDTAGQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVV 130
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPS 192
A +IGNKAD+ A G D A ++ E+QGL S
Sbjct: 131 A------------LIGNKADMPA-----GRREVAADEAARFAEEQGLFFS 163
>gi|401426815|ref|XP_003877891.1| putative ras-related rab-4 [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322494138|emb|CBZ29435.1| putative ras-related rab-4 [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 203
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 28/169 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++++V+GDSGVGK+ L++ ++ + +QTIG G K I G + +K
Sbjct: 9 LKLIVIGDSGVGKSCLLHRFIEDTFSDEQTQTIGIEYGAKIIDLGGA-----KVK----- 58
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ERYK Y G + V+D++ R + S+ +W ++
Sbjct: 59 ---LQIWDTAGQERYKSVTRSYYRGATGCLIVYDVNNRSSYESVPQWLSDVRQ------- 108
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLL 190
G V ++IGNK D+A R N A + ++ GLL
Sbjct: 109 -----LAGSDVVVMLIGNKIDLAKGNSVRAVQHN---EASLYAQQNGLL 149
>gi|444706397|gb|ELW47739.1| Ras-related protein Rab-7L1 [Tupaia chinensis]
Length = 204
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + DSE
Sbjct: 9 KVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWS-----------DSEM- 56
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ Q+W ++ + T
Sbjct: 57 VRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G PVP +++ NK D++
Sbjct: 113 ----PNGEPVPCLLLANKCDLS 130
>gi|118375516|ref|XP_001020942.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila]
gi|89302709|gb|EAS00697.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila SB210]
gi|307777796|dbj|BAJ21294.1| Rab-family small GTPase Rab5B [Tetrahymena thermophila]
Length = 197
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 31/162 (19%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GD+GVGKTS++N F SQT T G+S +GD
Sbjct: 7 IKVVILGDAGVGKTSILNRF-SNKGFDENSQT----------TLGASFIPKVLTRGDKTY 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F ++WD +G E+Y+ + Y + + V+D++ R + L+KW E
Sbjct: 56 KF--QIWDTAGQEKYRSLAPLYYRDTHAALIVYDITNRASFDVLKKWVQE---------- 103
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQW 183
L GP + + V+GNK D+ +E + D A+Q+
Sbjct: 104 LREHGPANITIA--VVGNKVDLIDREDVK------YDEAKQY 137
>gi|449280941|gb|EMC88156.1| Ras-related protein Rab-7L1, partial [Columba livia]
Length = 169
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 28/163 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV S T+G +K + + S S +++
Sbjct: 9 KVLVVGDATVGKTSLVQRYANDSFNRHYKSTVGVDFALKVVQW----SESETVR------ 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ QKW ++ +
Sbjct: 59 --LQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNVSTFSNSQKWKQDLDSKLVL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVE 185
P G PVP +++ NK D++ TR G WVE
Sbjct: 113 ----PDGSPVPCLLLANKCDLSPWAVTRDEVG--------WVE 143
>gi|348519068|ref|XP_003447053.1| PREDICTED: ras-related protein Rab-38-like [Oreochromis niloticus]
Length = 207
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 89/200 (44%), Gaps = 41/200 (20%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+GD GVGKTS++ V TIG +K + + DS
Sbjct: 8 KVLVIGDLGVGKTSIIKRYVHQIFSQHYRATIGVDFALKVLQW------------DSNTV 55
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ERY + + Y + G + V D+++ T ++ KW ++ + T +
Sbjct: 56 IRLQLWDIAGQERYGNMTRVYYREAVGALVVFDVTRASTFDAVLKWKDDLDSKVTLN--- 112
Query: 143 ASGGPGGLPVPYVVIGNKAD------------------VAAKEGTRGSSGNLVDAARQWV 184
G PVP V++ NK+D V E + + N+ +AAR V
Sbjct: 113 -----HGRPVPAVLLANKSDQLVSQQPKLDAFCRENGFVGWFETSAKENTNIEEAARCLV 167
Query: 185 EKQGLLPSSEELPLTESFPG 204
E + +EE +TE PG
Sbjct: 168 EH---ILRNEESLVTEREPG 184
>gi|301786128|ref|XP_002928478.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Ailuropoda
melanoleuca]
gi|281339455|gb|EFB15039.1| hypothetical protein PANDA_018438 [Ailuropoda melanoleuca]
Length = 203
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + S S ++
Sbjct: 9 KVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQW----SDSEMVR------ 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ Q+W ++ + T
Sbjct: 59 --LQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNAMTFSNSQRWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G PVP +++ NK D++
Sbjct: 113 ----PNGEPVPCLLLANKCDLS 130
>gi|297845296|ref|XP_002890529.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336371|gb|EFH66788.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 205
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 83/169 (49%), Gaps = 29/169 (17%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ SQ T+G +T ++ D +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVN----NKFSQQYKATIGADFVT--------KELQID-DR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ ++ SL W E + P
Sbjct: 56 LVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNYLKSFDSLDNWHAEFLKRASPRDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQG 188
+A P++++GNK DV G + +V AR+W ++G
Sbjct: 116 MA--------FPFILLGNKVDV------DGGNSRVVSEKKAREWCAEKG 150
>gi|66810506|ref|XP_638960.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74897084|sp|Q54QR3.1|RB32A_DICDI RecName: Full=Ras-related protein Rab-32A
gi|60467547|gb|EAL65568.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 219
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 19/141 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LVVGD G GKTS++ V TIG +K I + D + +
Sbjct: 17 KILVVGDIGTGKTSIIKRFVHNIFSMHYKSTIGVDFALKVINW------------DPKTE 64
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + G + D+++ T ++ KW +I + T+
Sbjct: 65 VRLQLWDIAGQERFGSMTRVYYKEAVGAMITFDVTRMSTFEAVAKWKADIDSKVTY---- 120
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
G P+P V++ NK D+
Sbjct: 121 ---GADEKPIPVVLLANKCDL 138
>gi|401413308|ref|XP_003886101.1| hypothetical protein NCLIV_065010 [Neospora caninum Liverpool]
gi|325120521|emb|CBZ56075.1| hypothetical protein NCLIV_065010 [Neospora caninum Liverpool]
Length = 210
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 23/161 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + ++
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKDVVI-------------DDK 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+ V++WD +G ER++ Y + + V D++ ++ SLQ W E + + P
Sbjct: 56 EVTVQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTNPKSFESLQSWKEEFLIQSSPADP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQ 182
+ P+VV+GNK D +E R SS RQ
Sbjct: 116 DS--------FPFVVVGNKVD--EREKRRVSSSKAEAFCRQ 146
>gi|355714977|gb|AES05183.1| RAB7, member RAS oncoprotein family-like 1 [Mustela putorius furo]
Length = 202
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + S S ++
Sbjct: 9 KVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQW----SDSEMVR------ 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ Q+W ++ + T
Sbjct: 59 --LQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G PVP +++ NK D++
Sbjct: 113 ----PNGEPVPCLLLANKCDLS 130
>gi|294656310|ref|XP_002770249.1| DEHA2D02420p [Debaryomyces hansenii CBS767]
gi|199431371|emb|CAR65608.1| DEHA2D02420p [Debaryomyces hansenii CBS767]
Length = 215
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 20/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+ V + TIG K IT D+ +
Sbjct: 9 LKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEITI------------DNNK 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + +D++ ++ +L W E S P
Sbjct: 57 QVTLQIWDTAGQERFQSLGVAFYRGADCCVLCYDVTNEKSLNNLSSWKDEFLIQSNVSNP 116
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
P+++IGNK DV
Sbjct: 117 --------QDFPFIIIGNKIDV 130
>gi|229608951|ref|NP_659124.2| ras-related protein Rab-7L1 [Mus musculus]
Length = 204
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + DSE
Sbjct: 9 KVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWS-----------DSEM- 56
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ Q+W ++ + T
Sbjct: 57 VRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G PVP +++ NK+D++
Sbjct: 113 ----PSGEPVPCLLLANKSDLS 130
>gi|344234626|gb|EGV66494.1| hypothetical protein CANTEDRAFT_101058 [Candida tenuis ATCC 10573]
Length = 215
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 20/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+ V + TIG K IT D+ +
Sbjct: 9 LKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKDITL------------DNNK 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + +D++ ++ +L W E S P
Sbjct: 57 QVTLQIWDTAGQERFQSLGVAFYRGADCCVLCYDVTNEKSLNNLASWKDEFLVQSNVSNP 116
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
P+++IGNK DV
Sbjct: 117 --------QDFPFIIIGNKIDV 130
>gi|449272831|gb|EMC82555.1| Ras-related protein Rab-44, partial [Columba livia]
Length = 167
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 25/145 (17%)
Query: 18 PTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKG 77
P +++ VG+S VGKTS + + F + T+G VK IT S+ +
Sbjct: 5 PDRLFKIIFVGNSSVGKTSFLRRFCEDRFFPGTAATVGVDYNVKTITVDSTQVA------ 58
Query: 78 DSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGT 137
++LWD +G ERY+ + + +GVI ++D++ + T T++++W + I +
Sbjct: 59 -------LQLWDTAGQERYRSITKQFFRKADGVIVMYDITAKDTFTAVKQWLISIEET-- 109
Query: 138 FSAPLASGGPGGLPVPYVVIGNKAD 162
G VP +++GNK D
Sbjct: 110 ----------NGENVPVLLLGNKTD 124
>gi|443713143|gb|ELU06149.1| hypothetical protein CAPTEDRAFT_64412, partial [Capitella teleta]
Length = 190
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 21/160 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ G GKTS++ V TIG +K I + D++
Sbjct: 24 KVLVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVINW------------DADTL 71
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++QKW ++ + L
Sbjct: 72 IRLQLWDIAGQERFGNMTRVYYKEAVGCFIVFDVTRTSTFDAVQKWKNDLDS----KVQL 127
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQ 182
A G P+P V++ NK D +KEG S + + R+
Sbjct: 128 ADGS----PIPCVLLANKCD-QSKEGMVTSQTQMEEFCRE 162
>gi|74025574|ref|XP_829353.1| Ras-related GTP-binding protein [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|42491763|tpg|DAA01326.1| TPA_exp: RBJ-like protein [Trypanosoma brucei]
gi|70834739|gb|EAN80241.1| ras-related GTP-binding protein, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|261335328|emb|CBH18322.1| ras-related GTP-binding protein, putative [Trypanosoma brucei
gambiense DAL972]
Length = 216
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 28/225 (12%)
Query: 14 NGGPPTG------QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGS 67
+G P TG +++++ +G GVGK+ L+ +G S+ TIG GVK +
Sbjct: 8 DGSPTTGGDKSGPRIKIVSLGSVGVGKSCLIKQYCEGRFVSKYIPTIGIDYGVKRVDVRV 67
Query: 68 SGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK 127
+ S K + +F WD+SG E Y + R+ Y GV+ V+D++ + +L +
Sbjct: 68 PAHLAPSGKISTRVNF----WDMSGCEEYLEIRNEFYRATEGVLLVYDVTDAESFFALNQ 123
Query: 128 WAVE----IATSG--TFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAAR 181
W E + T G T+ A + +P VV NK D ++ G R + R
Sbjct: 124 WVKEMEAHVNTKGNDTYVARV----DASVPCKVVVCANKIDEVSEGGGRKKRAVSSETGR 179
Query: 182 QWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFF 226
QW ++ + E+ G + A E + K+ V FF
Sbjct: 180 QWAKEH-------DYKYFETSACTGAGVEEALETLF-KDVVAAFF 216
>gi|123402494|ref|XP_001302063.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|123499207|ref|XP_001327567.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736306|gb|AAX97482.1| small Rab GTPase RabX4 [Trichomonas vaginalis]
gi|121883314|gb|EAX89133.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
gi|121910498|gb|EAY15344.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 201
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 75/152 (49%), Gaps = 21/152 (13%)
Query: 13 LNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSS 72
L+ + Q+++ V+G+ VGKTS++N V+G+ S T+G + K +T+ ++
Sbjct: 3 LDSDNSSTQLKITVLGEYFVGKTSVINRFVEGTFDDSYSATLGFSFLSKELTHNNTK--- 59
Query: 73 NSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEI 132
+ + +WD SG ERY+ Y +G I V+DL+ ++ SL+ W
Sbjct: 60 ----------YILNIWDTSGSERYRSVAPNYYRGSDGCILVYDLTNHKSLESLEFWY--- 106
Query: 133 ATSGTFSAPLASGGPGGLPVPYVVIGNKADVA 164
G F + G VP ++IGNK+D+
Sbjct: 107 ---GEFKSLAQKNGIQ--QVPALLIGNKSDLV 133
>gi|147900245|ref|NP_001090134.1| ras-related protein Rab-19 [Xenopus laevis]
gi|123898987|sp|Q32NQ0.1|RAB19_XENLA RecName: Full=Ras-related protein Rab-19
gi|80476372|gb|AAI08533.1| MGC130981 protein [Xenopus laevis]
Length = 213
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 46/230 (20%)
Query: 13 LNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSS 72
L P +++++GDS VGKT +V+ G TIG V+ S
Sbjct: 7 LEDDPFDFLFKIILIGDSNVGKTCVVHRFQSGIFMDNQQNTIGVDFTVR----------S 56
Query: 73 NSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEI 132
+I G + V++WD +G ER++ Y +G I +D+++R++ S+ W E
Sbjct: 57 LNINGKKVK---VQVWDTAGQERFRTITQSYYRSAHGAIIAYDITRRQSFESVPHWIYE- 112
Query: 133 ATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPS 192
+G G + +++GNK+D+A K L + A EK GLL
Sbjct: 113 -----------AGKYGAANLMLMLMGNKSDLAEKRQI------LFEEACTLAEKHGLLAV 155
Query: 193 SEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAP 242
E +AKE+ E + + LI R F +P
Sbjct: 156 LE---------------TSAKESHNVDEVFLLMAKELIARNTFHYHNESP 190
>gi|167377314|ref|XP_001734353.1| GTP-binding protein yptV5 [Entamoeba dispar SAW760]
gi|165904184|gb|EDR29502.1| GTP-binding protein yptV5, putative [Entamoeba dispar SAW760]
Length = 207
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 26/178 (14%)
Query: 17 PPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIK 76
P ++++++GDS VGK+SL+N + S ++ TIG K I +
Sbjct: 4 PKKTLLKMILIGDSAVGKSSLMNQFINKSFTAQYKATIGADFLTKEI----------DVD 53
Query: 77 GDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
G+S +++WD +GHE++ Y + V D++ ++ SL W + +
Sbjct: 54 GES---IALQVWDTAGHEKFMSFGQAFYRGSDCCFLVFDVTNEQSFQSLDTWKNDFLSGA 110
Query: 137 TFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
+ P P+VV+GNK D A + + D A++W E G +P E
Sbjct: 111 NPTNP--------TNFPFVVMGNKVDEDAAKRVVSN-----DQAKEWCENNGDIPYYE 155
>gi|402589927|gb|EJW83858.1| Rab7 protein [Wuchereria bancrofti]
Length = 212
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 21/155 (13%)
Query: 15 GGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNS 74
GG ++V+++GDSGVGKTSL+N V ++ TIG K I+ G
Sbjct: 6 GGRKKALLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKDISVG-------- 57
Query: 75 IKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIAT 134
+R +++WD +G ER++ Y + + +D++ + SL+ W E
Sbjct: 58 -----DRTVTMQIWDTAGQERFQSLGVAFYRGADCCVLTYDITNASSFRSLESWRDEFLI 112
Query: 135 SGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGT 169
+ P P+V++GNK D+ A+
Sbjct: 113 QASPRDP--------EHFPFVLLGNKIDLEARRAV 139
>gi|359495179|ref|XP_003634933.1| PREDICTED: ras-related protein Rab7 isoform 2 [Vitis vinifera]
Length = 216
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 88/199 (44%), Gaps = 25/199 (12%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + SQ T+G +T ++ D +R
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVH----KKFSQQYKATIGADFVT--------KELQID-DR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEI--ATSGTFS 139
+++WD +G ER++ Y + + V+D++ R+ +L W E F
Sbjct: 56 LVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDTLDNWHEEFLKQVHDAFF 115
Query: 140 APLASGGPGG-LPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSEEL 196
PL P P++++GNK D+ G + +V A W +G +P E
Sbjct: 116 IPLFLANPSDPKTFPFILLGNKIDI------DGGNSRVVSKKKAEDWCASKGNIPYFET- 168
Query: 197 PLTESFPGGGGLIAAAKEA 215
E + + AK A
Sbjct: 169 SAKEDYNVDAAFLCIAKTA 187
>gi|223973683|gb|ACN31029.1| unknown [Zea mays]
Length = 206
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 84/195 (43%), Gaps = 28/195 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + TIG K + +R
Sbjct: 10 LKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKEVLI-------------EDR 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ LY + + V+D++ R+ +L W E + S P
Sbjct: 57 LVTLQIWDTAGQERFQSLGVALYRGADCCVLVYDVNSNRSFDTLNTWHDEFLNQASPSDP 116
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD-AARQWVEKQGLLPSSEELPLTE 200
P++++GNK DV G S + D A +W +G +P E E
Sbjct: 117 KT--------FPFILLGNKIDVDG-----GKSRVVSDKKAMEWCASKGNIPYFET-SAKE 162
Query: 201 SFPGGGGLIAAAKEA 215
+ + AK A
Sbjct: 163 DYNVDNAFLTVAKLA 177
>gi|51316505|sp|Q91YQ1.1|RAB7L_MOUSE RecName: Full=Ras-related protein Rab-7L1; AltName: Full=Rab-7-like
protein 1
gi|16359355|gb|AAH16133.1| RAB7, member RAS oncogene family-like 1 [Mus musculus]
gi|20809768|gb|AAH29056.1| RAB7, member RAS oncogene family-like 1 [Mus musculus]
gi|112293019|dbj|BAF02887.1| Rab29 [Mus musculus]
gi|148707749|gb|EDL39696.1| RAB7, member RAS oncogene family-like 1, isoform CRA_a [Mus
musculus]
Length = 204
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + DSE
Sbjct: 9 KVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWS-----------DSEM- 56
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ Q+W ++ + T
Sbjct: 57 VRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G PVP +++ NK+D++
Sbjct: 113 ----PSGEPVPCLLLANKSDLS 130
>gi|226494367|ref|NP_001150039.1| ras-related protein Rab7 [Zea mays]
gi|195618620|gb|ACG31140.1| ras-related protein Rab7 [Zea mays]
gi|195625594|gb|ACG34627.1| ras-related protein Rab7 [Zea mays]
gi|195636256|gb|ACG37596.1| ras-related protein Rab7 [Zea mays]
gi|223949159|gb|ACN28663.1| unknown [Zea mays]
Length = 207
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 27/174 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNNRFSNQYKATIGADFLTKEVQI-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVSKSFEKLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD-AARQWVEKQGLLPSSE 194
P+VV+GNK DV G+S + + A+ W +G +P E
Sbjct: 116 --------ENFPFVVLGNKIDVDG-----GNSRTVSEKKAKAWCASKGNIPYFE 156
>gi|170579042|ref|XP_001894651.1| ras-related protein Rab-7 [Brugia malayi]
gi|158598646|gb|EDP36501.1| ras-related protein Rab-7, putative [Brugia malayi]
Length = 212
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 21/155 (13%)
Query: 15 GGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNS 74
GG ++V+++GDSGVGKTSL+N V ++ TIG K I+ G
Sbjct: 6 GGRKKALLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKDISVG-------- 57
Query: 75 IKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIAT 134
+R +++WD +G ER++ Y + + +D++ + SL+ W E
Sbjct: 58 -----DRTVTMQIWDTAGQERFQSLGVAFYRGADCCVLTYDITNASSFRSLESWRDEFLI 112
Query: 135 SGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGT 169
+ P P+V++GNK D+ A+
Sbjct: 113 QASPRDP--------EHFPFVLLGNKIDLEARRAV 139
>gi|225457841|ref|XP_002267387.1| PREDICTED: ras-related protein RABC1 isoform 1 [Vitis vinifera]
gi|359492296|ref|XP_003634396.1| PREDICTED: ras-related protein RABC1 [Vitis vinifera]
Length = 211
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 28/162 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGK++L+ L ++F S TIG VKH+ G +
Sbjct: 17 KLLLIGDSGVGKSTLL-LSFTSNTFEDLSPTIGVDFKVKHVNIGG-------------KK 62
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEIATSGTFSAP 141
+ +WD +G ER++ S Y GVI V+D+++R T T+L WA EI T
Sbjct: 63 LKLAIWDTAGQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDC 122
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQW 183
+ +++GNK D ++ G +D AR++
Sbjct: 123 IK-----------MLVGNKVDKESERVVTKKEG--IDFAREY 151
>gi|407863091|gb|EKG07877.1| small GTP-binding protein Rab18, putative [Trypanosoma cruzi]
Length = 218
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 16/141 (11%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V ++GDSGVGK+SL+ G+ S TIG VK++ +N +K R
Sbjct: 9 IKVFLLGDSGVGKSSLMLSFASGTFDPDISSTIGIDFKVKNVEV----MDANGVK----R 60
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+ + LWD +G ER++ S Y N V+ V+D+++ +T LQ+W E A
Sbjct: 61 NVNIHLWDTAGQERFRTLTSSYYRGANAVVLVYDVNEPQTFHGLQRWMEE--------AD 112
Query: 142 LASGGPGGLPVPYVVIGNKAD 162
+ Y++IGNK D
Sbjct: 113 VFCRNDDEDDAVYLLIGNKID 133
>gi|403214773|emb|CCK69273.1| hypothetical protein KNAG_0C01600 [Kazachstania naganishii CBS
8797]
Length = 214
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 23/172 (13%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
Q +++++GDS VGK+S+V+ VK + TIG + I S IK
Sbjct: 3 QFKLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGAAFLSQTIKVESEDQQEVVIK---- 58
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
E+WD +G ERYK + Y N + V+D++Q + + W E+
Sbjct: 59 ----FEIWDTAGQERYKSLAPMYYRNANAALVVYDVTQEDSLNKAKAWVEELKNK----- 109
Query: 141 PLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDA--ARQWVEKQGLL 190
G + ++GNK D+ EG+ V A A+Q+ E QGL+
Sbjct: 110 ------VGDEDLVIFLVGNKVDLC--EGSDNEDKRAVAATLAKQYAEDQGLM 153
>gi|346472783|gb|AEO36236.1| hypothetical protein [Amblyomma maculatum]
Length = 212
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 77/160 (48%), Gaps = 21/160 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+G+ G GKTS++ V TIG +K + + D
Sbjct: 11 KILVIGELGTGKTSIIKRYVHQFFSHHYRATIGVDFALKVVEW------------DDNTL 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ +T +++KW +++ +
Sbjct: 59 IRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSQTFEAVRKWKMDLDSKVQL---- 114
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQ 182
P G P+P V++ NK D+ +KEG ++ + + ++
Sbjct: 115 ----PEGTPIPCVLLANKCDM-SKEGIVNNAAEMNEFCKE 149
>gi|407421093|gb|EKF38806.1| rab1 small GTP-binding protein, putative [Trypanosoma cruzi
marinkellei]
Length = 244
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 36/183 (19%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VL++G+ G GKT L+ V G + TIG +K + + ++ R+
Sbjct: 12 KVLIIGEGGTGKTCLIRRYVHGIFLATNKATIGVDFALKDVVHAAT-----------NRN 60
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ERY + Y G I V D+++ T KW ++ S F
Sbjct: 61 ITLQLWDIAGQERYGQMTRVYYQAAAGAIIVADITRPETLDLAVKWKQDV-DSKVFL--- 116
Query: 143 ASGGPGGLPVPYVVIGNKADV---------AAKEGTRGSSGNLVDAARQWVEKQGLLPSS 193
G G +P +++ NK D+ AA++GT G SG + +++G+ +
Sbjct: 117 ---GSSGKSIPCILLINKVDLLPNGMLAASAAEDGT-GHSG--------FADERGIQKTK 164
Query: 194 EEL 196
EE+
Sbjct: 165 EEM 167
>gi|408797124|gb|AFU92144.1| small GTP binding protein [Arachis hypogaea]
Length = 205
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 33/204 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + SQ T+G +T ++ D +R
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVH----KKFSQQYKATIGADFVT--------KELQID-DR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ ++ SL+ W E S P
Sbjct: 56 LVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDSLENWHEEFLKQANPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD--AARQWVEKQGLLPSSEELPLT 199
P+ V+GNK D+ G + +V A+ W +G +P E
Sbjct: 116 RM--------FPFTVLGNKIDI------DGGNSRVVSEKKAKDWCTSKGNIPYFET-SAK 160
Query: 200 ESFPGGGGLIAAAKEA---RYDKE 220
E + + AK A YD++
Sbjct: 161 EDYNVDAAFLCIAKTALSNEYDQD 184
>gi|71411989|ref|XP_808200.1| small GTP-binding protein Rab18 [Trypanosoma cruzi strain CL
Brener]
gi|70872357|gb|EAN86349.1| small GTP-binding protein Rab18, putative [Trypanosoma cruzi]
Length = 218
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 16/141 (11%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V ++GDSGVGK+SL+ G+ S TIG VK++ +N +K R
Sbjct: 9 IKVFLLGDSGVGKSSLMLSFASGTFDPDISSTIGIDFKVKNVEV----MDANGVK----R 60
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+ + LWD +G ER++ S Y N V+ V+D+++ +T LQ+W E A
Sbjct: 61 NVNIHLWDTAGQERFRTLTSSYYRGANAVVLVYDVNEPQTFHGLQRWMEE--------AD 112
Query: 142 LASGGPGGLPVPYVVIGNKAD 162
+ Y++IGNK D
Sbjct: 113 VFCRNDDEDDAVYLLIGNKID 133
>gi|380015232|ref|XP_003691611.1| PREDICTED: LOW QUALITY PROTEIN: phosphotriesterase-related
protein-like [Apis florea]
Length = 547
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 20/141 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+ LV+GD GVGKT+LV +G S TIG +K + + D
Sbjct: 354 KFLVIGDYGVGKTALVRRYTEGKFTSNYKITIGADFAIKTLDW------------DPLTK 401
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWD++GHER+ + Y V D+S+ T S++KW ++ T
Sbjct: 402 INLQLWDVAGHERFGYMTRVYYKYAVAAALVFDISRIATFQSIKKWLCDLREKVTL---- 457
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
P G +P V++ NK D+
Sbjct: 458 ----PDGSNIPVVLLANKCDI 474
>gi|125980342|ref|XP_001354195.1| GA20071 [Drosophila pseudoobscura pseudoobscura]
gi|195167530|ref|XP_002024586.1| GL22545 [Drosophila persimilis]
gi|54642500|gb|EAL31247.1| GA20071 [Drosophila pseudoobscura pseudoobscura]
gi|194107991|gb|EDW30034.1| GL22545 [Drosophila persimilis]
Length = 219
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 25/141 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GD G GKT +V+ G+ R TIG +K I + IK
Sbjct: 23 KIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIEV-----EAKQIK------ 71
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y NGV+ V+D+++R + ++LQKW E+ ++A
Sbjct: 72 --LQIWDTAGQERFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVR---RYTAS- 125
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
V ++IGNK D+
Sbjct: 126 --------NVLIILIGNKCDL 138
>gi|397480709|ref|XP_003811617.1| PREDICTED: uncharacterized protein LOC100988764 [Pan paniscus]
Length = 561
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS
Sbjct: 363 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------DSRTL 410
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++ +
Sbjct: 411 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHL---- 466
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G P+P V++ NK D
Sbjct: 467 ----PNGSPIPAVLLANKCD 482
>gi|326912237|ref|XP_003202460.1| PREDICTED: ras-related protein Rab-19-like [Meleagris gallopavo]
Length = 214
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 96/232 (41%), Gaps = 47/232 (20%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GDS VGKT +V+ G + + TIG V+ S I G +
Sbjct: 17 KIILIGDSNVGKTCVVHRFKTGQFYEKQQNTIGVDFTVR----------SMDIDGKKVK- 65
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y +G I +DL++R T S+ W E+
Sbjct: 66 --IQVWDTAGQERFRTITQSYYRSAHGAILAYDLTRRSTFESIPHWIHEVEKY------- 116
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTESF 202
G L V ++IGNK+D K L + A EK GLL E
Sbjct: 117 ---GAANLVV--MLIGNKSDSVDKRQV------LFEDACTLAEKHGLLAVLE-------- 157
Query: 203 PGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAPNPWSISPTHKPI 254
+AKEA+ +E + + LI R +P P S+ KP+
Sbjct: 158 -------TSAKEAQNVEEVFVLMAKELIARNTLQLHGESP-PNSVYLDSKPV 201
>gi|326427102|gb|EGD72672.1| hypothetical protein PTSG_04403 [Salpingoeca sp. ATCC 50818]
Length = 201
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 76/150 (50%), Gaps = 20/150 (13%)
Query: 18 PTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKG 77
P G +V+V+GD VGKTS+++ G+ +T+G +K + KG
Sbjct: 7 PDGPYKVIVIGDGAVGKTSIISRYALGTFDEGYKKTLGVDFALKLVER----------KG 56
Query: 78 DSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGT 137
++D +++LWDI+G +++ + + + + V DL+ R+T +++KW E+
Sbjct: 57 --KQDVYLQLWDIAGQDQFSSLTRVYFRHASACVTVFDLTARQTFENVKKWMDEV----- 109
Query: 138 FSAPLASGGPGGLPVPYVVIGNKADVAAKE 167
A + + G PVP +++ NK D+ E
Sbjct: 110 -EAKVNTSETG--PVPAILLANKCDLKPHE 136
>gi|448523590|ref|XP_003868901.1| Ypt72 GTPase [Candida orthopsilosis Co 90-125]
gi|380353241|emb|CCG25997.1| Ypt72 GTPase [Candida orthopsilosis]
Length = 211
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 20/146 (13%)
Query: 18 PTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKG 77
P ++++VVGDSGVGKTSL++ V + TIG K IT
Sbjct: 3 PKKLLKIIVVGDSGVGKTSLMHQFVNNKFSQQYKATIGADFLTKEITL------------ 50
Query: 78 DSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGT 137
D + +++WD +G ER++ Y + + D++ ++ +L W E
Sbjct: 51 DGGKTVTLQIWDTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSN 110
Query: 138 FSAPLASGGPGGLPVPYVVIGNKADV 163
S P P+V+IGNK DV
Sbjct: 111 VSNP--------QDFPFVIIGNKIDV 128
>gi|332375042|gb|AEE62662.1| unknown [Dendroctonus ponderosae]
Length = 203
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 30/161 (18%)
Query: 15 GGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNS 74
P +V+++GDS VGKT+L +G+ +P TIG K +
Sbjct: 6 NSPRRNTFKVIIIGDSNVGKTTLTYRYCEGAFTDKPEATIGVDFRRKIV----------E 55
Query: 75 IKGDSERDFFVELWDISGHERYK-DCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIA 133
I G+ +ELWD +G ER++ + Y + + ++ V+D++ R + TSL KW E
Sbjct: 56 IDGEP---ITLELWDTAGQERFRMSMATHYYRKTDAILLVYDVTNRLSFTSLVKWVEE-- 110
Query: 134 TSGTFSAPLASGGPGGLPVPYVVIGNKAD----VAAKEGTR 170
S ++ P VP +++GNK D VA +E R
Sbjct: 111 -SQSYCMP---------DVPKILVGNKCDGVVTVATQEAQR 141
>gi|17737545|ref|NP_523970.1| Rab19, isoform A [Drosophila melanogaster]
gi|442630989|ref|NP_001261575.1| Rab19, isoform B [Drosophila melanogaster]
gi|194865952|ref|XP_001971685.1| GG14295 [Drosophila erecta]
gi|195491260|ref|XP_002093486.1| GE20724 [Drosophila yakuba]
gi|195588689|ref|XP_002084090.1| GD14074 [Drosophila simulans]
gi|2313047|dbj|BAA21712.1| rab-related protein 3 [Drosophila melanogaster]
gi|7295127|gb|AAF50452.1| Rab19, isoform A [Drosophila melanogaster]
gi|17945955|gb|AAL49022.1| RE48347p [Drosophila melanogaster]
gi|190653468|gb|EDV50711.1| GG14295 [Drosophila erecta]
gi|194179587|gb|EDW93198.1| GE20724 [Drosophila yakuba]
gi|194196099|gb|EDX09675.1| GD14074 [Drosophila simulans]
gi|220948860|gb|ACL86973.1| Rab-RP3-PA [synthetic construct]
gi|440215482|gb|AGB94270.1| Rab19, isoform B [Drosophila melanogaster]
Length = 219
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 72/141 (51%), Gaps = 25/141 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GD G GKT +V+ G+ R TIG +K I +++G +
Sbjct: 23 KIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTI----------AVEG---KQ 69
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y NGV+ V+D+++R + ++LQKW E+ ++A
Sbjct: 70 IKLQIWDTAGQERFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVR---RYTAS- 125
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
V +++GNK D+
Sbjct: 126 --------NVLIILVGNKCDL 138
>gi|116672840|gb|ABK15561.1| small GTPase Rab2 [Capsicum annuum]
Length = 205
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 45/208 (21%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSG GKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGAGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+ +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LYTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADV----------------AAKEG-----TRGSSGNLVDAA 180
P+VV+GNK DV A +G T G VD+A
Sbjct: 116 --------DNFPFVVLGNKIDVDGGNSRVVSEKKAKAWCASKGIPYFETSAKEGFNVDSA 167
Query: 181 RQWVEKQGLLPSSEE---LPLTESFPGG 205
Q + K L EE LP T GG
Sbjct: 168 FQCIAKNALKNEPEEEIYLPDTIDVAGG 195
>gi|344277036|ref|XP_003410311.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Loxodonta
africana]
Length = 204
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + DSE
Sbjct: 9 KVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWS-----------DSEM- 56
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ Q+W ++ + T
Sbjct: 57 VRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G PVP +++ NK D++
Sbjct: 113 ----PSGEPVPCLLLANKCDLS 130
>gi|145546430|ref|XP_001458898.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834089|emb|CAI44446.1| rab_A30 [Paramecium tetraurelia]
gi|124426720|emb|CAK91501.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GDSGVGKTSL+N V + T+G K + +R
Sbjct: 10 KIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMI-------------DDRM 56
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y + + V+D++ ++ SL W E G P
Sbjct: 57 VTLQIWDTAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDP- 115
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQG 188
P+VV+GNK D A++ + S A+QW + G
Sbjct: 116 -------EHFPFVVLGNKLDKASERKVQESK------AQQWCKSHG 148
>gi|326432764|gb|EGD78334.1| Rab7 GTPase [Salpingoeca sp. ATCC 50818]
Length = 206
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 27/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K +T +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVTV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V D++ R+ SL+ W E + P
Sbjct: 56 LVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTVPRSFESLEAWRDEFLIQASPRDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+GNK D+ + R + N A+ W +++G +P E
Sbjct: 116 --------EHFPFVVLGNKVDL---KDNRAITEN---RAKSWCDEKGNIPYFE 154
>gi|195325951|ref|XP_002029694.1| GM25038 [Drosophila sechellia]
gi|194118637|gb|EDW40680.1| GM25038 [Drosophila sechellia]
Length = 219
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 72/141 (51%), Gaps = 25/141 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GD G GKT +V+ G+ R TIG +K I +++G +
Sbjct: 23 KIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTI----------AVEG---KQ 69
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y NGV+ V+D+++R + ++LQKW E+ ++A
Sbjct: 70 IKLQIWDTAGQERFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVR---RYTAS- 125
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
V +++GNK D+
Sbjct: 126 --------NVLIILVGNKCDL 138
>gi|1370184|emb|CAA98169.1| RAB7B [Lotus japonicus]
Length = 205
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 30/196 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V R SQ T+G +T ++ D +R
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVH----KRFSQQYKATIGADFVT--------KELQID-DR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ R+ +L W E
Sbjct: 56 LVTLQIWDTAGQERFQSLGVSFYRGADCCVLVYDVNVMRSFDTLDTWHEEFLKQ------ 109
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD--AARQWVEKQGLLPSSEELPLT 199
+ P P++++GNK D+ G + +V A W +G +P E
Sbjct: 110 --ANPPDTRTFPFILLGNKIDI------DGGNSRVVSEKKANDWCVSKGNIPYFET-SAK 160
Query: 200 ESFPGGGGLIAAAKEA 215
E + G ++ AK A
Sbjct: 161 EDYIGDAAFLSIAKTA 176
>gi|71662000|ref|XP_818013.1| small GTP-binding protein Rab18 [Trypanosoma cruzi strain CL
Brener]
gi|70883239|gb|EAN96162.1| small GTP-binding protein Rab18, putative [Trypanosoma cruzi]
Length = 218
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 16/150 (10%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V ++GDSGVGK+SL+ G+ S TIG VK++ ++ +K R
Sbjct: 9 IKVFLLGDSGVGKSSLMLSFASGTFDPDISSTIGIDFKVKNVEV----MDADGVK----R 60
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+ + LWD +G ER++ S Y N V+ V+D+++ +T LQ+W E A
Sbjct: 61 NVNIHLWDTAGQERFRTLTSSYYRGANAVVLVYDVNEPQTFHGLQRWMEE--------AD 112
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRG 171
+ Y++IGNK D G+ G
Sbjct: 113 VFCRNDDEDDAVYLLIGNKIDKCIGGGSEG 142
>gi|449458101|ref|XP_004146786.1| PREDICTED: ras-related protein RABC1-like isoform 1 [Cucumis
sativus]
gi|449458103|ref|XP_004146787.1| PREDICTED: ras-related protein RABC1-like isoform 2 [Cucumis
sativus]
gi|449529576|ref|XP_004171774.1| PREDICTED: ras-related protein RABC1-like isoform 1 [Cucumis
sativus]
gi|449529578|ref|XP_004171775.1| PREDICTED: ras-related protein RABC1-like isoform 2 [Cucumis
sativus]
Length = 213
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 40/168 (23%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGK++L+ L SF S TIG +KH+T G +
Sbjct: 17 KLLLIGDSGVGKSTLL-LRFTSDSFEDLSPTIGVDFKIKHVTVGG-------------KK 62
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEIATSGTFSAP 141
+ +WD +G ER++ Y G+I V+D+++R T T+L WA EI T
Sbjct: 63 LKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDC 122
Query: 142 LASGGPGGLPVPYVVIGNKAD------VAAKEGTRGSSGNLVDAARQW 183
+ +++GNK D V+ KEG +D AR++
Sbjct: 123 IK-----------MLVGNKVDKESERVVSKKEG--------IDFAREY 151
>gi|440804116|gb|ELR24994.1| lightoid family protein [Acanthamoeba castellanii str. Neff]
Length = 216
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 21/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD G GKT+++ V TIG +K I + DS+
Sbjct: 12 KVLVVGDMGTGKTAIIRRYVNNMYSDSYKSTIGVDFALKEINW------------DSKTL 59
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ERY + + Y + G V D+++ + +++KW +I + T
Sbjct: 60 VRLQLWDIAGQERYGNMTRVYYKEAVGAFVVFDITRNSSFEAVKKWKQDIDSKVTLHDQ- 118
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P+P V++ NK D+
Sbjct: 119 --------PIPVVLLANKCDLV 132
>gi|4566765|gb|AAD23450.1|AF116859_1 small GTPase rabE [Dictyostelium discoideum]
Length = 228
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 19/141 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LVVGD G GKTS++ V TIG +K I + D + +
Sbjct: 26 KILVVGDIGTGKTSIIKRFVHNIFSMHYKSTIGVDFALKVINW------------DPKTE 73
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + G + D+++ T ++ KW +I + T+
Sbjct: 74 VRLQLWDIAGQERFGSMTRVYYKEAVGAMITFDVTRMSTFEAVAKWKADIDSKVTY---- 129
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
G P+P V++ NK D+
Sbjct: 130 ---GADEKPIPVVLLANKCDL 147
>gi|356508969|ref|XP_003523225.1| PREDICTED: ras-related protein RABC1-like [Glycine max]
Length = 207
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 83/162 (51%), Gaps = 30/162 (18%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGK+SL+ L SF S TIG VK++T ++G +
Sbjct: 14 KLLMIGDSGVGKSSLL-LCFTSDSFEDLSPTIGVDFKVKYLT----------MEG---KK 59
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEIATSGTFSAP 141
+ +WD +G ER++ S Y G+I +D+++R T T+L + WA EI
Sbjct: 60 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMAYDVTRRETFTNLSEIWAKEI--------D 111
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNL-VDAARQ 182
L S P + +++GNK D KEG R + VD AR+
Sbjct: 112 LYSTNPECIK---MLVGNKVD---KEGDRVVTKKEGVDFARE 147
>gi|32997031|gb|AAP45327.1| RJL [Trypanosoma cruzi]
Length = 219
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 21/178 (11%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+++++ +G SGVGK+ ++ +G S+ TIG GVK ++ + S +
Sbjct: 23 RIKIISIGSSGVGKSCVIKRYCEGRFVSKYIPTIGIDYGVKRVSLRAPAHMS-----PAP 77
Query: 81 RDFFVEL--WDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTF 138
+FFV + WD++G + + + R+ Y + GV+ +D++ + +L +W E+ T
Sbjct: 78 PNFFVRVNFWDMAGRDEFLEIRNEFYYAVEGVLLFYDVTDASSFAALDEWLKEMQT--YV 135
Query: 139 SAPLASGG------PGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAA--RQWVEKQG 188
+AP ++GG P P VV NK D G +V A R+W E G
Sbjct: 136 NAPRSTGGETLGVNPVKKPAMVVVCANKVD----NEVDGGKKRVVSEADGRRWAEAHG 189
>gi|221484856|gb|EEE23146.1| rab9, putative [Toxoplasma gondii GT1]
Length = 432
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 23/161 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + ++
Sbjct: 231 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKDVVI-------------DDK 277
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+ V++WD +G ER++ Y + + V D++ ++ SLQ W E + S P
Sbjct: 278 EVTVQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTNPKSFESLQSWKEEFLIQSSPSDP 337
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQ 182
+ P+VV+GNK D +E R SS RQ
Sbjct: 338 DS--------FPFVVVGNKVD--EREKRRVSSSKAEAFCRQ 368
>gi|351710940|gb|EHB13859.1| Ras-related protein Rab-7L1 [Heterocephalus glaber]
Length = 204
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + DSE
Sbjct: 9 KVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWS-----------DSEM- 56
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ Q+W ++ + T
Sbjct: 57 VRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G PVP +++ NK D++
Sbjct: 113 ----PSGEPVPCLLLANKCDLS 130
>gi|297830192|ref|XP_002882978.1| hypothetical protein ARALYDRAFT_479064 [Arabidopsis lyrata subsp.
lyrata]
gi|297328818|gb|EFH59237.1| hypothetical protein ARALYDRAFT_479064 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 25/173 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQI-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 IFTLQIWDTAGQERFQSLGVAFYRGADCCVLVNDVNVMKSFENLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+GNK DV + S A+ W +G +P E
Sbjct: 116 --------ENFPFVVLGNKTDVDGGKSRVVSE----KKAKAWCASKGNIPYFE 156
>gi|351725909|ref|NP_001235829.1| uncharacterized protein LOC100499773 [Glycine max]
gi|255626443|gb|ACU13566.1| unknown [Glycine max]
Length = 215
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 80/168 (47%), Gaps = 40/168 (23%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGK++L+ L +F S TIG VK++T G S
Sbjct: 19 KLLLIGDSGVGKSTLL-LSFTSDTFEDLSPTIGVDFKVKYVTMGGKKSK----------- 66
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEIATSGTFSAP 141
+ +WD +G ER++ S Y G+I V+D+++R T T+L WA EI T
Sbjct: 67 --LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDC 124
Query: 142 LASGGPGGLPVPYVVIGNKAD------VAAKEGTRGSSGNLVDAARQW 183
+ +++GNK D V+ KEG +D AR++
Sbjct: 125 IK-----------MLVGNKVDKESERVVSKKEG--------IDFAREY 153
>gi|237835873|ref|XP_002367234.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|211964898|gb|EEB00094.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221506090|gb|EEE31725.1| ehrab7g protein, putative [Toxoplasma gondii VEG]
Length = 432
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 23/161 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + ++
Sbjct: 231 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKDVVI-------------DDK 277
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+ V++WD +G ER++ Y + + V D++ ++ SLQ W E + S P
Sbjct: 278 EVTVQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTNPKSFESLQSWKEEFLIQSSPSDP 337
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQ 182
+ P+VV+GNK D +E R SS RQ
Sbjct: 338 DS--------FPFVVVGNKVD--EREKRRVSSSKAEAFCRQ 368
>gi|291402521|ref|XP_002717602.1| PREDICTED: RAB7, member RAS oncogene family-like 1 isoform 1
[Oryctolagus cuniculus]
Length = 204
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + S S ++
Sbjct: 9 KVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQW----SDSEVVR------ 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ Q+W ++ + T
Sbjct: 59 --LQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G PVP +++ NK D++
Sbjct: 113 ----PNGEPVPCLLLANKCDLS 130
>gi|15234026|ref|NP_192710.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
gi|75164695|sp|Q948K8.1|RAG3A_ARATH RecName: Full=Ras-related protein RABG3a; Short=AtRABG3a; AltName:
Full=Ras-related protein Rab76; Short=AtRab76
gi|15718418|dbj|BAB68376.1| AtRab76 [Arabidopsis thaliana]
gi|110738224|dbj|BAF01041.1| AtRab76 [Arabidopsis thaliana]
gi|119360063|gb|ABL66760.1| At4g09720 [Arabidopsis thaliana]
gi|332657383|gb|AEE82783.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
Length = 206
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 27/174 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + TIG K + G E+
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIG-------------EK 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ + Y + V+D++ R+ +L+ W E + S P
Sbjct: 56 LVTLQIWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD-AARQWVEKQGLLPSSE 194
P++V+GNK DV GSS + D A W G +P E
Sbjct: 116 KT--------FPFIVLGNKIDVDG-----GSSRVVSDKKAADWCASNGNIPYFE 156
>gi|15233284|ref|NP_188231.1| RAB GTPase-like protein G3C [Arabidopsis thaliana]
gi|75274463|sp|Q9LW76.1|RAG3C_ARATH RecName: Full=Ras-related protein RABG3c; Short=AtRABG3c; AltName:
Full=Ras-related protein Rab73; Short=AtRab73; AltName:
Full=Ras-related protein Rab7D; Short=AtRab7D
gi|9294457|dbj|BAB02676.1| RAS-related GTP-binding protein [Arabidopsis thaliana]
gi|15718412|dbj|BAB68373.1| AtRab73 [Arabidopsis thaliana]
gi|21536921|gb|AAM61253.1| putative RAS-related GTP-binding protein [Arabidopsis thaliana]
gi|30102532|gb|AAP21184.1| At3g16100 [Arabidopsis thaliana]
gi|110735857|dbj|BAE99904.1| putative RAS-related GTP-binding protein [Arabidopsis thaliana]
gi|332642250|gb|AEE75771.1| RAB GTPase-like protein G3C [Arabidopsis thaliana]
Length = 206
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQI-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 IFTLQIWDTAGQERFQSLGVAFYRGADCCVLVNDVNVMKSFENLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
P+VV+GNK DV G +V A+ W +G +P E
Sbjct: 116 --------ENFPFVVLGNKTDV------DGGKSRVVTEKKAKSWCASKGNIPYFE 156
>gi|324514540|gb|ADY45900.1| Ras-related protein Rab-43 [Ascaris suum]
Length = 210
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 25/153 (16%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GD GVGKT +V G+ R TIG +K + I+G +
Sbjct: 12 KIVLIGDMGVGKTCVVQRFKNGTFIERQGTTIGVDFTMKTLV----------IEGKRVK- 60
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD G ER++ Y NG+I +D++ R++ SLQ+W +++ F+AP
Sbjct: 61 --LQIWDTGGQERFRTITQSYYRSANGIILCYDMTCRQSFESLQRWLDDVS---KFAAP- 114
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGN 175
V V++ KAD+ ++ GN
Sbjct: 115 --------NVAKVLVATKADLESERVVDSEEGN 139
>gi|409083334|gb|EKM83691.1| hypothetical protein AGABI1DRAFT_110327 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426201612|gb|EKV51535.1| hypothetical protein AGABI2DRAFT_189775 [Agaricus bisporus var.
bisporus H97]
Length = 203
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + ++
Sbjct: 6 LKVVILGDSGVGKTSLMNQYVNKRFNTQYKATIGADFLTKEVVVDDKAAT---------- 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 56 ---MQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNTKSFDALDSWRDEFLIQASPQDP 112
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+V++GNK DV +EG R S A W + +G +P E
Sbjct: 113 --------DNFPFVLLGNKIDV--EEGNRPVSQK---RAMAWCQSKGNIPYFE 152
>gi|407043376|gb|EKE41918.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 204
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 26/166 (15%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+ +++GDSGVGKTSL+N V TIG +K +T +
Sbjct: 9 KTILIGDSGVGKTSLINRYVNNQFSDVYKATIGSDFLIKPVTVNGA-------------Q 55
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+ +++WD +GHERY + Y + + D++ R + L+KW E + P
Sbjct: 56 YTLQIWDTAGHERYSCVVTTFYRGSDCCVLCFDVTNRESFNHLEKWKNEFIDGANATNPA 115
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQG 188
+ +P V+GNK D + R S + AR+W + G
Sbjct: 116 S--------IPIYVVGNKID--CEPNKREVSQ---EQAREWCKLNG 148
>gi|320167989|gb|EFW44888.1| small GTPase rabE [Capsaspora owczarzaki ATCC 30864]
Length = 210
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 25/156 (16%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD G GKTS++ V TIG +K I + E D
Sbjct: 11 KVLVVGDIGTGKTSIIKRYVHNIFSMHYKATIGVDFALKVINW--------------EPD 56
Query: 83 FFV--ELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
V +LWDI+G ER+ + + Y + I V D+++ T ++QKW +I S
Sbjct: 57 TVVRLQLWDIAGQERFGNMTRVYYKEAVAAIIVFDVTRVSTFEAVQKWKFDIDAKVKLST 116
Query: 141 PLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNL 176
G +P V++ NK D+ AKEG +S +
Sbjct: 117 --------GEDIPVVLLANKCDL-AKEGLVKNSAQM 143
>gi|327273287|ref|XP_003221412.1| PREDICTED: ras and EF-hand domain-containing protein-like [Anolis
carolinensis]
Length = 693
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 25/145 (17%)
Query: 18 PTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKG 77
P +++ VG+S VGKTS + + + S + T+G VK + +
Sbjct: 502 PDCLFKIIFVGESSVGKTSFLRRVCEDRFSSGTAATVGVDYSVKTVAVDN---------- 551
Query: 78 DSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGT 137
R ++LWD +G ERY+ + + +GVI ++D++ R T ++++W V I +
Sbjct: 552 ---RRIVLQLWDTAGQERYRSITKQFFRKADGVIVMYDITTRETFLAVKQWLVSIEEA-- 606
Query: 138 FSAPLASGGPGGLPVPYVVIGNKAD 162
G +P +++GNK D
Sbjct: 607 ----------TGENIPILLLGNKTD 621
>gi|110760060|ref|XP_001120743.1| PREDICTED: ras-related protein Rab-32-like [Apis mellifera]
Length = 218
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 20/141 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+ LV+GD GVGKT+LV +G S TIG +K + + D
Sbjct: 25 KFLVIGDYGVGKTALVRRYTEGKFTSNYKITIGADFAIKTLDW------------DPLTK 72
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWD++GHER+ + Y V D+S+ T S++KW ++ T
Sbjct: 73 INLQLWDVAGHERFGYMTRVYYKYAVAAALVFDISRIATFQSIKKWLCDLREKVTL---- 128
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
P G +P V++ NK D+
Sbjct: 129 ----PDGSNIPVVLLANKCDI 145
>gi|391337134|ref|XP_003742928.1| PREDICTED: rab-like protein 3-like [Metaseiulus occidentalis]
Length = 270
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 85/204 (41%), Gaps = 34/204 (16%)
Query: 65 YGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTS 124
+G S +R FFVELW+I G+ + R + Y ++GVI V+DL+ ++ +
Sbjct: 91 FGRRQISGGEFDLHCQRTFFVELWEIGGNAGHAQARRVFYKSVHGVILVYDLTNSKSHDN 150
Query: 125 LQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWV 184
L+ W + A S A + L VP +VIG K A Q
Sbjct: 151 LKMWLAD-AFSQRERAHFDAETFADLQVPVLVIGTK-------------------ALQKT 190
Query: 185 EKQGL----LPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMP 240
E++GL +EEL + GL + A + FF +I +RYFS+ +
Sbjct: 191 ERRGLTIADFCGAEELLIDSFSETSHGLDPGSSNA----VKLSYFFDKVIEKRYFSESIQ 246
Query: 241 APNPWSISPTHKP------IQRLD 258
+ P + +P +Q LD
Sbjct: 247 SSPPTCVGDRRRPATSPRYLQHLD 270
>gi|195375225|ref|XP_002046402.1| GJ12523 [Drosophila virilis]
gi|194153560|gb|EDW68744.1| GJ12523 [Drosophila virilis]
Length = 220
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 25/144 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GD GKTS++ G+ R TIG +K I ++G +
Sbjct: 23 KIVLIGDCCTGKTSILQRFKTGNYVERHGNTIGVDFSMKTI----------EVEGKQVK- 71
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y NGVI V+D+++R T +LQKW E+ ++A
Sbjct: 72 --LQIWDTAGQERFRTITQSYYRANNGVIIVYDITKRSTFANLQKWIEEVR---RYTAS- 125
Query: 143 ASGGPGGLPVPYVVIGNKADVAAK 166
V ++IGNK D+ A+
Sbjct: 126 --------NVLIILIGNKCDLEAE 141
>gi|34559282|gb|AAL08054.2| Rab7a protein [Paramecium octaurelia]
gi|53850820|gb|AAU95464.1| Rab7a protein [Paramecium octaurelia]
gi|210137241|gb|ACJ09042.1| Rab7a1 protein [Paramecium octaurelia]
Length = 206
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 27/166 (16%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GDSGVGKTSL+N V + T+G K + +R
Sbjct: 10 KIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMI-------------DDRM 56
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y + + V+D++ ++ SL W E G P
Sbjct: 57 VTLQIWDTAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDP- 115
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQG 188
P+VV+GNK D A + + S A+QW + G
Sbjct: 116 -------EHFPFVVLGNKLDKATERKVQESK------AQQWCKSHG 148
>gi|449269571|gb|EMC80332.1| Ras-related protein Rab-38 [Columba livia]
Length = 212
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + TIG +K +++ D+E
Sbjct: 12 KLLVIGDLGVGKTSIIKRYVHQNFSPHYRATIGVDFALKVLSW------------DAETV 59
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ +
Sbjct: 60 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDITRPATFEAVTKWKEDLDSKLVL---- 115
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G PVP V++ NK D
Sbjct: 116 ----PNGKPVPAVLLANKCD 131
>gi|407846083|gb|EKG02418.1| ras-related GTP-binding protein, putative [Trypanosoma cruzi]
Length = 219
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 21/178 (11%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+++++ +G SGVGK+ ++ +G S+ TIG GVK ++ + S +
Sbjct: 23 RIKIISIGSSGVGKSCVIKRYCEGRFVSKYIPTIGIDYGVKRVSLRAPAHMS-----PAP 77
Query: 81 RDFFVEL--WDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTF 138
+FFV + WD++G + + + R+ Y + GV+ +D++ + +L +W E+ T
Sbjct: 78 PNFFVRVNFWDMAGRDEFLEIRNEFYYAVEGVLLFYDVTDASSFAALDEWLKEMQT--YV 135
Query: 139 SAPLASGG------PGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAA--RQWVEKQG 188
+AP ++GG P P VV NK D G +V A R+W E G
Sbjct: 136 NAPRSTGGETLGVNPVKKPAIVVVCANKVD----NEVDGGKKRVVSEADGRRWAEAHG 189
>gi|326512278|dbj|BAJ96120.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 207
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 27/174 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKEVKI-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFEKLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD-AARQWVEKQGLLPSSE 194
P+V++GNK DV G+S + + A+ W +G +P E
Sbjct: 116 --------ENFPFVLLGNKIDVDG-----GNSRTVSEKKAKAWCASKGNIPYFE 156
>gi|290997235|ref|XP_002681187.1| rab family small GTPase [Naegleria gruberi]
gi|284094810|gb|EFC48443.1| rab family small GTPase [Naegleria gruberi]
Length = 163
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 70/146 (47%), Gaps = 25/146 (17%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
V++LV+GDS GK+SLV +G TIG +K++ KGD
Sbjct: 1 MVKMLVIGDSNCGKSSLVLKYTEGKFDEGLVSTIGVDFKLKYLK-----------KGD-- 47
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
+ +++WD +G ERY+ + Y I VI V DL+ R ++QKW E+ FSA
Sbjct: 48 KTIAIQIWDTAGQERYRTITNSYYRGIPAVIVVFDLTDDRALANVQKWIKEVK---KFSA 104
Query: 141 PLASGGPGGLPVPYVVIGNKADVAAK 166
P V +++GNK D+ K
Sbjct: 105 P---------NVVSILVGNKVDLTDK 121
>gi|224062828|ref|XP_002300895.1| predicted protein [Populus trichocarpa]
gi|118486942|gb|ABK95304.1| unknown [Populus trichocarpa]
gi|222842621|gb|EEE80168.1| predicted protein [Populus trichocarpa]
Length = 205
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + SQ T+G +T ++ D +R
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVH----KKFSQQYKATIGADFVT--------KELQID-DR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ R+ +L W E T S P
Sbjct: 56 LVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDTLDNWHEEFLKQATPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
P++++GNK D+ G + +V A+ W +G +P E
Sbjct: 116 RT--------FPFILLGNKIDI------DGGNSRVVSEKKAKDWCASKGNIPYFE 156
>gi|395531196|ref|XP_003767668.1| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Sarcophilus
harrisii]
Length = 204
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 20/148 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + S S ++
Sbjct: 9 KVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVVQW----SDSEMVR------ 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + D++ T ++ Q+W ++ T
Sbjct: 59 --LQLWDIAGQERFTSMTRLYYRDAAACVIMFDVTNATTFSNSQRWKQDLDCKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTR 170
P G PVP +++ NK+D++ TR
Sbjct: 113 ----PSGEPVPCLLLANKSDLSPWAVTR 136
>gi|410081708|ref|XP_003958433.1| hypothetical protein KAFR_0G02670 [Kazachstania africana CBS 2517]
gi|372465021|emb|CCF59298.1| hypothetical protein KAFR_0G02670 [Kazachstania africana CBS 2517]
Length = 208
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 20/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL++ V + SQ T+G +T I D +R
Sbjct: 9 LKVIILGDSGVGKTSLMHRYVN----DKYSQQYKATIGADFLT--------KEINVDGDR 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ ++ +++ W E S+P
Sbjct: 57 TATMQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNTKSFENIKSWRDEFLVHANVSSP 116
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
+ P+V++GNK D+
Sbjct: 117 ES--------FPFVILGNKIDI 130
>gi|449459232|ref|XP_004147350.1| PREDICTED: ras-related protein RABC1-like [Cucumis sativus]
gi|449513301|ref|XP_004164289.1| PREDICTED: ras-related protein RABC1-like [Cucumis sativus]
Length = 209
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 80/168 (47%), Gaps = 40/168 (23%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGK+SL+ L +F S TIG VK++T G +
Sbjct: 15 KLLMIGDSGVGKSSLL-LSFTSDNFEDLSPTIGVDFKVKYVTAGG-------------KK 60
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEIATSGTFSAP 141
+ +WD +G ER++ S Y G+I V+D+++R T T+L + WA EI T
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQDC 120
Query: 142 LASGGPGGLPVPYVVIGNKAD------VAAKEGTRGSSGNLVDAARQW 183
+ +++GNK D V KEG +D AR++
Sbjct: 121 IK-----------MLVGNKVDKESYRTVTKKEG--------IDMAREY 149
>gi|348578125|ref|XP_003474834.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Cavia
porcellus]
Length = 204
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 20/149 (13%)
Query: 16 GPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSI 75
G +VLVVGD+ VGKTSLV + T+G +K I +
Sbjct: 2 GSHDHLFKVLVVGDAAVGKTSLVRRYSQDCFSKHYKSTVGVDFALKVIQWS--------- 52
Query: 76 KGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATS 135
DSE ++LWDI+G ER+ + Y + + + D++ T ++ Q+W ++ +
Sbjct: 53 --DSEM-VRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSK 109
Query: 136 GTFSAPLASGGPGGLPVPYVVIGNKADVA 164
T P G PVP +++ NK D++
Sbjct: 110 LTL--------PNGEPVPCLLLANKCDLS 130
>gi|71410339|ref|XP_807468.1| ras-related GTP-binding protein [Trypanosoma cruzi strain CL
Brener]
gi|70871478|gb|EAN85617.1| ras-related GTP-binding protein, putative [Trypanosoma cruzi]
Length = 219
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 23/186 (12%)
Query: 13 LNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSS 72
+NG P +++++ +G SGVGK+ ++ +G S+ TIG GVK ++ + S
Sbjct: 17 INGTEP--RIKIISIGSSGVGKSCVIKRYCEGRFVSKYIPTIGIDYGVKRVSLRAPAHMS 74
Query: 73 NSIKGDSERDFFVEL--WDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAV 130
+ +FFV + WD++G + + + R+ Y GV+ +D++ + +L +W
Sbjct: 75 -----PAPPNFFVRVNFWDMAGRDEFLEIRNEFYYAAEGVLLFYDVTDASSFATLDEWLK 129
Query: 131 EIATSGTFSAPLASGG------PGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAA--RQ 182
E+ T +AP +GG P P VV NK D G +V A R+
Sbjct: 130 EMQTY--VNAPRNTGGETLGVNPVKKPAIVVVCANKVD----NEVDGGKKRVVSEADGRR 183
Query: 183 WVEKQG 188
W E G
Sbjct: 184 WAEAHG 189
>gi|383854352|ref|XP_003702685.1| PREDICTED: 28S ribosomal protein S5, mitochondrial-like [Megachile
rotundata]
Length = 630
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 25/141 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GD G GKT +V G+ R TIG +K + ++
Sbjct: 433 KIVLIGDCGTGKTCVVQRFRSGTFIERHGNTIGVDFSMKTVLI-------------DDKK 479
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y NGVI V+D+++R T SLQ W E+ + L
Sbjct: 480 IKLQIWDTAGQERFRTITQSYYRSANGVIVVYDITKRSTFLSLQHWVEEVRRYTSSHVLL 539
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
V++GNK D+
Sbjct: 540 ------------VLVGNKCDL 548
>gi|443693582|gb|ELT94920.1| hypothetical protein CAPTEDRAFT_101663 [Capitella teleta]
Length = 174
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 20/145 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L +GD GVGKTSLV V G T+G +K + + S + +IK
Sbjct: 6 KLLTIGDPGVGKTSLVQRYVHGYYTKDYKATLGVDFALKLVKW----SDNVTIK------ 55
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + I + DL+QR + + KW ++ +
Sbjct: 56 --LQLWDIAGQERFTSMTRVYYRDAHACIIMFDLTQRSSFQNALKWKADLDSK------- 106
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKE 167
G VP +++ NK D++ +E
Sbjct: 107 -CCQEDGSSVPCILLANKCDLSRRE 130
>gi|348533005|ref|XP_003453996.1| PREDICTED: ras-related protein Rab-32-like [Oreochromis niloticus]
Length = 230
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 20/141 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++VLV+GD GVGKTS++ V TIG +K + + D +
Sbjct: 7 LKVLVIGDLGVGKTSIIKRYVHQVFSQHYRATIGVDFALKVLNW------------DHKT 54
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWDI+G ERY + + Y + G + V D+++ T ++ KW ++ + S
Sbjct: 55 VVRLQLWDIAGQERYGNMTRVYYREAVGALVVFDMTRLSTFQAILKWKGDLDSKVALS-- 112
Query: 142 LASGGPGGLPVPYVVIGNKAD 162
G PVP V++ NK D
Sbjct: 113 ------NGRPVPAVLLANKCD 127
>gi|118372409|ref|XP_001019401.1| Ras family protein [Tetrahymena thermophila]
gi|89301168|gb|EAR99156.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777780|dbj|BAJ21286.1| Rab-family small GTPase Rab11D [Tetrahymena thermophila]
Length = 363
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 24/148 (16%)
Query: 19 TGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGD 78
T ++++VGD+GVGKT ++N VKG TIG K +T G+ IK
Sbjct: 148 THMYKIVLVGDAGVGKTHIINRYVKGQLPHAIIPTIGIEFATKTVTLRDGGT----IK-- 201
Query: 79 SERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTF 138
++WD +G E+Y+ S Y + G + V+D+++ ++ S+Q+W EI
Sbjct: 202 ------TQIWDTAGQEKYRSITSAHYRKAVGALLVYDVTKEKSFESIQRWLEEIRLHADK 255
Query: 139 SAPLASGGPGGLPVPYVVIGNKADVAAK 166
L +++GNK D+ K
Sbjct: 256 DIVL------------MLVGNKVDLIHK 271
>gi|242004078|ref|XP_002422965.1| rab9 and, putative [Pediculus humanus corporis]
gi|212505881|gb|EEB10227.1| rab9 and, putative [Pediculus humanus corporis]
Length = 206
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 28/173 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTS++N V ++ TIG + + G +R
Sbjct: 9 LKVIILGDSGVGKTSIMNQYVNNKFSNQYKATIGADFLTRDVDVG-------------DR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V D+S T SL+ W E + P
Sbjct: 56 RVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPTTYKSLENWRDEFLIQASPRDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VVIGNK DV + + A+QW + + +P E
Sbjct: 116 --------DNFPFVVIGNKIDVENRSVS-------TKRAQQWCQSKNNIPYFE 153
>gi|154422404|ref|XP_001584214.1| Ras family protein [Trichomonas vaginalis G3]
gi|121918460|gb|EAY23228.1| Ras family protein [Trichomonas vaginalis G3]
Length = 214
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 24/168 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LVVG+ G GKTSL+ V G FS +T T+GV +S IK D + +
Sbjct: 18 KILVVGEMGTGKTSLLRKYVDGV-FSEYYKT---TIGVDF--------ASKDIKWDDKTN 65
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + G + V D+ + +T +W +I S F++
Sbjct: 66 VSLQLWDIAGQERFGSMTHVYYQEAVGALLVFDVMRHQTLELAIQWKKDI-DSKVFTSQ- 123
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLL 190
P+P +++GNK D+A G G + + + ++ G +
Sbjct: 124 ------DKPIPCLLLGNKIDLAED----GKWGKTEEEMKAFCDEHGFI 161
>gi|226503041|ref|NP_001149268.1| ras-related protein Rab-18 [Zea mays]
gi|195625924|gb|ACG34792.1| ras-related protein Rab-18 [Zea mays]
gi|223972897|gb|ACN30636.1| unknown [Zea mays]
gi|413920116|gb|AFW60048.1| Ras protein Rab-18 [Zea mays]
Length = 215
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 28/162 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGK+SL+ L SF S TIG VK +T G +
Sbjct: 21 KLLLIGDSGVGKSSLL-LRFTADSFEDLSPTIGVDFKVKMVTIGG-------------KK 66
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEIATSGTFSAP 141
+ +WD +G ER++ S Y GVI V+D+++R T T+L WA EI T
Sbjct: 67 LKLAIWDTAGQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDC 126
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQW 183
+ +++GNK D ++ G ++ AR++
Sbjct: 127 IK-----------MLVGNKVDKESERAVTKKEG--IEFAREY 155
>gi|354478103|ref|XP_003501255.1| PREDICTED: ras-related protein Rab-7L1-like [Cricetulus griseus]
Length = 204
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + DSE
Sbjct: 9 KVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWS-----------DSEM- 56
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ Q+W ++ + T
Sbjct: 57 VRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G PVP +++ NK+D++
Sbjct: 113 ----PSGDPVPCLLLANKSDLS 130
>gi|296230574|ref|XP_002760764.1| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Callithrix
jacchus]
Length = 203
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + S S ++
Sbjct: 9 KVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQW----SDSEIVR------ 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ Q+W ++ + T
Sbjct: 59 --LQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G PVP +++ NK D++
Sbjct: 113 ----PNGEPVPCLLLANKCDLS 130
>gi|290998764|ref|XP_002681950.1| rab family small GTPase [Naegleria gruberi]
gi|284095576|gb|EFC49206.1| rab family small GTPase [Naegleria gruberi]
Length = 215
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 27/142 (19%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQ-TIGCTVGVKHITYGSSGSSSNSIKGDSER 81
+V+V+GDSGVGK++L+ + + F++ ++ TIG G K I Y +IKG
Sbjct: 8 KVVVIGDSGVGKSNLITRFTQ-NKFTKDTKPTIGVEFGAKSIEYDGV-----TIKG---- 57
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++WD +G ER++ + Y NG + V+D++ + + +L+KW EI G
Sbjct: 58 ----QIWDTAGQERFRAISAAYYRGANGALIVYDITNQESFDNLEKWFKEIENQGENGC- 112
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
+++GNK D+
Sbjct: 113 -----------INILVGNKCDL 123
>gi|449461445|ref|XP_004148452.1| PREDICTED: ras-related protein Rab7-like [Cucumis sativus]
gi|449503042|ref|XP_004161814.1| PREDICTED: ras-related protein Rab7-like [Cucumis sativus]
Length = 209
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 26/205 (12%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+ +GDSGVGKTSL+N V + TIG K + +
Sbjct: 11 LKVIFLGDSGVGKTSLMNRYVYKKFNLQYKATIGADFMTKELRIDDQLVT---------- 60
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ + Y + +FV+D++ ++ SL W E + P
Sbjct: 61 ---LQVWDTAGQERFQSLGAAFYRGADCCVFVYDVNVTKSFESLSSWHEEFLKQAEPADP 117
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
A P++++GNK DV S ARQW + +G +P E +
Sbjct: 118 KA--------FPFLLLGNKIDVDDGHSRAVSEKR----ARQWCDSRGSMPYF-ETSAKQD 164
Query: 202 FPGGGGLIAAAKEARYDKEAVMKFF 226
+ I AK A ++E +F
Sbjct: 165 YNVNEAFICIAKAALTNEEEQEPYF 189
>gi|255558460|ref|XP_002520255.1| protein with unknown function [Ricinus communis]
gi|223540474|gb|EEF42041.1| protein with unknown function [Ricinus communis]
Length = 208
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 40/168 (23%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGK+SL+ L ++F S TIG V+++T G +
Sbjct: 15 KLLLIGDSGVGKSSLL-LSFTSNTFDDLSPTIGVDFKVQYVTIGG-------------KK 60
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEIATSGTFSAP 141
+ +WD +G ER++ S Y G+I V+D+++R T T+L WA EI T
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDC 120
Query: 142 LASGGPGGLPVPYVVIGNKAD------VAAKEGTRGSSGNLVDAARQW 183
+ +++GNK D V+ KEG +D ARQ+
Sbjct: 121 IK-----------MLVGNKVDKESERVVSKKEG--------IDFARQY 149
>gi|42542760|gb|AAH66502.1| Rab32 protein [Danio rerio]
gi|62089548|gb|AAH92179.1| Rab32 protein [Danio rerio]
gi|182891326|gb|AAI64307.1| Rab32 protein [Danio rerio]
Length = 213
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 21/151 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS+
Sbjct: 15 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------DSKTL 62
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ T L
Sbjct: 63 VRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDITRGSTFEAVSKWKHDLDT----KVKL 118
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSS 173
A+G P+P V++ NK D K+G+ SS
Sbjct: 119 ANGN----PIPSVLLANKCD-QKKDGSNNSS 144
>gi|351696045|gb|EHA98963.1| Ras-related protein Rab-32 [Heterocephalus glaber]
Length = 209
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 20/156 (12%)
Query: 13 LNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSS 72
+ G RVLV+G+ GVGKTS++ V TIG +K +++
Sbjct: 1 MGAGGKNMHFRVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLSW------- 53
Query: 73 NSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEI 132
DS ++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++
Sbjct: 54 -----DSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRGSTFEAVLKWKNDL 108
Query: 133 ATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEG 168
+ P G P+P V++ NK D + G
Sbjct: 109 DSKVHL--------PSGSPIPTVLLANKCDQSRDSG 136
>gi|115439561|ref|NP_001044060.1| Os01g0714900 [Oryza sativa Japonica Group]
gi|57899823|dbj|BAD87568.1| putative rab7 protein [Oryza sativa Japonica Group]
gi|113533591|dbj|BAF05974.1| Os01g0714900 [Oryza sativa Japonica Group]
gi|215767050|dbj|BAG99278.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 207
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 91/228 (39%), Gaps = 45/228 (19%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + TIG K + +R
Sbjct: 10 LKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKEVLI-------------EDR 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ R+ +L W E + S P
Sbjct: 57 LVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSNRSFDTLNTWHDEFLNQASPSDP 116
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
P++++GNK DV + S A +W +G +P E
Sbjct: 117 KT--------FPFILLGNKIDVDGGKSRVVSEKK----AMEWCSSKGNIPYFE------- 157
Query: 202 FPGGGGLIAAAKEARYDKEAVMKFFRMLIRRR-----YFSDEMPAPNP 244
+AKE R A + ++ + YF +P P P
Sbjct: 158 --------TSAKEDRNVDSAFLSVAKLALEHERDQDIYFQTVVPDPVP 197
>gi|225714176|gb|ACO12934.1| Ras-related protein Rab-33B [Lepeophtheirus salmonis]
Length = 225
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 35/171 (20%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+V+V+GD+GVGKT L GS TIG K++T + G+ D
Sbjct: 16 KVIVLGDAGVGKTCLTFRFCSGSFPDGVDSTIGVDFREKNLT----------VDGE---D 62
Query: 83 FFVELWDISGHERYKDCRSIL---YSQINGVIFVHDLSQRRTKT-SLQKWAVEIATSGTF 138
++LWD +G ER++ RS++ Y N V+FV+D++ + + T L KW E G
Sbjct: 63 IRLQLWDTAGQERFR--RSMISHYYRNANAVVFVYDINCKNSFTPGLDKWIAECEAQGLT 120
Query: 139 SAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGL 189
+ +P VV+GNKAD+ G LV A+++ +++G+
Sbjct: 121 PS----------KIPMVVLGNKADIQKS----GCVPTLV--AQRYADERGM 155
>gi|169844390|ref|XP_001828916.1| RAB small monomeric GTPase [Coprinopsis cinerea okayama7#130]
gi|116510028|gb|EAU92923.1| RAB small monomeric GTPase [Coprinopsis cinerea okayama7#130]
Length = 203
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 6 LKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMV-------------DDR 52
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 53 LVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDP 112
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+GNK DV +EG R + A W + +G +P E
Sbjct: 113 --------ENFPFVVLGNKIDV--EEGKRQVTQK---RAMAWCQSKGNIPYFE 152
>gi|255582823|ref|XP_002532185.1| protein with unknown function [Ricinus communis]
gi|223528133|gb|EEF30203.1| protein with unknown function [Ricinus communis]
Length = 209
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 34/188 (18%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + + SQ T+G +T ++ + E+
Sbjct: 13 LKVIVLGDSGVGKTSLMNQYV----YKKFSQQYKATIGADFVT--------KELQLE-EK 59
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ S Y + + V+D++ +++ +L W E P
Sbjct: 60 VVTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKSFETLNNWHEEFIKQADPIYP 119
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLP-----SSE 194
A P++++GNK D+ G + +V AR+W G +P + E
Sbjct: 120 DA--------FPFILLGNKIDI------DGGNSRVVSEKKAREWCASNGGIPYFETSAKE 165
Query: 195 ELPLTESF 202
+ + E+F
Sbjct: 166 DYGVDEAF 173
>gi|196012696|ref|XP_002116210.1| hypothetical protein TRIADDRAFT_50847 [Trichoplax adhaerens]
gi|190581165|gb|EDV21243.1| hypothetical protein TRIADDRAFT_50847 [Trichoplax adhaerens]
Length = 207
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 17/143 (11%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
+++L +GDSGVGKTS++ +G+ + T+G K + Y G + G +R
Sbjct: 12 IKLLALGDSGVGKTSVLYQYTEGTFNPKFISTVGIDFHEKRLVYRPQGGT-----GRGQR 66
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ + + G + V DL+ R++ ++Q W ++ T P
Sbjct: 67 -VHLQLWDTAGQERFRSLTTAFFHDAMGFLLVFDLTNRQSFRNIQDWISQLQTHAYCENP 125
Query: 142 LASGGPGGLPVPYVVIGNKADVA 164
V+IGNK D+A
Sbjct: 126 -----------EVVLIGNKIDLA 137
>gi|195427457|ref|XP_002061793.1| GK17190 [Drosophila willistoni]
gi|194157878|gb|EDW72779.1| GK17190 [Drosophila willistoni]
Length = 219
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 71/141 (50%), Gaps = 25/141 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GD G GKT +V G+ R TIG +K I +++G +
Sbjct: 23 KIVLIGDCGTGKTCIVERFKTGNFVERHGNTIGVDFSMKTI----------AVEGKQVK- 71
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y NGV+ V+D+++R + ++LQKW E+ ++A
Sbjct: 72 --LQIWDTAGQERFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVR---RYTAS- 125
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
V ++IGNK D+
Sbjct: 126 --------NVLIILIGNKCDL 138
>gi|115435424|ref|NP_001042470.1| Os01g0227300 [Oryza sativa Japonica Group]
gi|56784369|dbj|BAD82408.1| putative RAB7D [Oryza sativa Japonica Group]
gi|113532001|dbj|BAF04384.1| Os01g0227300 [Oryza sativa Japonica Group]
gi|215687298|dbj|BAG91885.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765542|dbj|BAG87239.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218187795|gb|EEC70222.1| hypothetical protein OsI_00983 [Oryza sativa Indica Group]
gi|222618023|gb|EEE54155.1| hypothetical protein OsJ_00961 [Oryza sativa Japonica Group]
Length = 207
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 27/174 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQI-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD-AARQWVEKQGLLPSSE 194
P+VV+GNK DV G+S + + A+ W +G +P E
Sbjct: 116 --------ENFPFVVLGNKIDVDG-----GNSRTVSEKKAKAWCASKGNIPYFE 156
>gi|67472102|ref|XP_651915.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978608|dbj|BAD34971.1| EhRab7D protein [Entamoeba histolytica]
gi|56468706|gb|EAL46529.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449709825|gb|EMD49016.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 204
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 26/166 (15%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+ +++GDSGVGKTSL+N V TIG +K +T +
Sbjct: 9 KAILIGDSGVGKTSLINRYVNNQFSDVYKATIGSDFLIKPVTVNGA-------------Q 55
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+ +++WD +GHERY + Y + + D++ R + L+KW E + P
Sbjct: 56 YTLQIWDTAGHERYSCVVTTFYRGSDCCVLCFDVTNRDSFNHLEKWKNEFIDGANATNPA 115
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQG 188
+ +P V+GNK D + R S + AR+W + G
Sbjct: 116 S--------IPIYVVGNKID--CEPNKREVSQ---EQAREWCKLNG 148
>gi|50978606|dbj|BAD34970.1| EhRab7C protein [Entamoeba histolytica]
gi|449708719|gb|EMD48124.1| EhRab7C protein, putative [Entamoeba histolytica KU27]
Length = 207
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 92/227 (40%), Gaps = 43/227 (18%)
Query: 17 PPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIK 76
P ++++++GDS VGK+SL+N + S ++ TIG K I +
Sbjct: 4 PKKTLLKMILIGDSAVGKSSLMNQFINKSFTAQYKATIGADFLTKEI----------DVD 53
Query: 77 GDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
G+S +++WD +GHE++ Y + V D++ ++ SL W +
Sbjct: 54 GESVA---LQVWDTAGHEKFMSFGQAFYRGSDCCFLVFDVTNEQSFQSLDTWKNDF---- 106
Query: 137 TFSAPLASGGP-GGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEE 195
L+ P P+VV+GNK D A + + + A+ W E G +P E
Sbjct: 107 -----LSGANPTNATNFPFVVMGNKVDEDAAKRVVTN-----EQAKDWCENNGDIPYYE- 155
Query: 196 LPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAP 242
+AK +EA + R +++ D P P
Sbjct: 156 --------------TSAKSGLNVEEAFLTVARKVVKTMKKEDNHPVP 188
>gi|328716362|ref|XP_003245910.1| PREDICTED: ras-related protein Rab-7L1-like isoform 2
[Acyrthosiphon pisum]
Length = 260
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 22/151 (14%)
Query: 18 PTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQ-TIGCTVGVKHITYGSSGSSSNSIK 76
P +V+++GD VGKT+ V V+ SFSR + T+G +K I S + +IK
Sbjct: 61 PEKLFKVIIIGDPTVGKTAFVKRYVQ-KSFSREYKGTVGVDFALKIIKV----SETETIK 115
Query: 77 GDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
++LWDI+G ER+ + Y +G + + DLS + + + KW ++
Sbjct: 116 --------LQLWDIAGQERFTWMTRVYYKDAHGCVIMFDLSNKNSFLNTLKWKKDVDAKC 167
Query: 137 TFSAPLASGGPGGLPVPYVVIGNKADVAAKE 167
T GG P+P +++GNK D+ ++
Sbjct: 168 T----QLDGG----PIPCMLLGNKCDLPQRQ 190
>gi|290983700|ref|XP_002674566.1| rab family small GTPase [Naegleria gruberi]
gi|284088157|gb|EFC41822.1| rab family small GTPase [Naegleria gruberi]
Length = 217
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 24/145 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
V+VL++GDSGVGK+ L+ F TIG +K T + R
Sbjct: 17 VKVLIIGDSGVGKSCLLVRYSDDDFFESHLTTIGVDFKIKTQTLPDN------------R 64
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER+ S Y NG++ V DL+ ++ ++ KW +I G S P
Sbjct: 65 VAKIQLWDTAGQERFNSIVSGYYRSSNGIMIVFDLTDEQSFRNVSKWLDQIKKHGDPSGP 124
Query: 142 LASGGPGGLPVPYVVIGNKADVAAK 166
+ V++GNKAD+ +K
Sbjct: 125 M------------VLVGNKADLTSK 137
>gi|335295264|ref|XP_003357447.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Sus scrofa]
gi|335295266|ref|XP_003357448.1| PREDICTED: ras-related protein Rab-7L1-like isoform 2 [Sus scrofa]
gi|335295268|ref|XP_003357449.1| PREDICTED: ras-related protein Rab-7L1-like isoform 3 [Sus scrofa]
Length = 203
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + S S ++
Sbjct: 9 KVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQW----SDSEVVR------ 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ Q+W ++ + T
Sbjct: 59 --LQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G PVP +++ NK D++
Sbjct: 113 ----PNGGPVPCLLLANKCDLS 130
>gi|354548148|emb|CCE44884.1| hypothetical protein CPAR2_406870 [Candida parapsilosis]
Length = 210
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 63/142 (44%), Gaps = 20/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+VVGDSGVGKTSL++ V + TIG K IT D +
Sbjct: 6 LKVIVVGDSGVGKTSLMHQFVNNKFSQQYKATIGADFLTKEITL------------DGGK 53
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + D++ ++ +L W E S P
Sbjct: 54 KVTLQIWDTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSNP 113
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
P+++IGNK DV
Sbjct: 114 --------QDFPFIIIGNKIDV 127
>gi|170084125|ref|XP_001873286.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650838|gb|EDR15078.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 203
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 6 LKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMV-------------DDR 52
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 53 LVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDP 112
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+GNK DV +EG R + A W + +G +P E
Sbjct: 113 --------ENFPFVVLGNKIDV--EEGKRQVTQK---RAMTWCQSKGNIPYFE 152
>gi|56417345|gb|AAV90623.1| Rab7 [Cenchrus americanus]
Length = 207
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 27/174 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQI-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFEKLNNWREEFLLQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD-AARQWVEKQGLLPSSE 194
P+V++GNK DV G+S + + A+ W +G +P E
Sbjct: 116 --------ENFPFVLLGNKIDVDG-----GNSRTISEKKAKAWCASKGNIPYFE 156
>gi|296471962|tpg|DAA14077.1| TPA: RAB38, member of RAS oncogene family-like [Bos taurus]
Length = 268
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + S TIG +K + + D E
Sbjct: 68 KLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHW------------DPETV 115
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + +
Sbjct: 116 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKNDLDSKLSL---- 171
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G PV V++ NK D
Sbjct: 172 ----PNGKPVSVVLLANKCD 187
>gi|320170236|gb|EFW47135.1| rab-like protein 3 [Capsaspora owczarzaki ATCC 30864]
Length = 290
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 18/102 (17%)
Query: 35 TSLVNLIVKGSSFSRPSQTIGCTVGVK-HITYGSSGSSSNSIKGDSERDFFVELWDISGH 93
TSLV+LI + PS T+GC++ VK H G R F +E WD+ G
Sbjct: 3 TSLVSLICRNEVLRSPSWTVGCSIDVKLHECNG--------------RTFCIEFWDVGGA 48
Query: 94 ERYKDCRSILY---SQINGVIFVHDLSQRRTKTSLQKWAVEI 132
+Y+ R +LY + I G++ V+DLS ++ T+L++W E
Sbjct: 49 AKYERTRQLLYDPANDIAGIVLVYDLSNNKSYTNLRRWLSEF 90
>gi|167391375|ref|XP_001739748.1| GTP-binding protein ypt7 [Entamoeba dispar SAW760]
gi|165896450|gb|EDR23858.1| GTP-binding protein ypt7, putative [Entamoeba dispar SAW760]
Length = 190
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 31/165 (18%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
++++++G+SGVGKTSL+ V S TIGC K +
Sbjct: 1 MLKLILIGESGVGKTSLIQRYVMNKFDSTYKTTIGCDFLAKTVYV-------------EN 47
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
+++ +++WD +GHE++ S Y +G I V D++ + T++ W E +S
Sbjct: 48 KEYNLQIWDTAGHEKFSSMVSSFYRGSDGAIIVFDVTNTSSFTAIDTWINE------YSR 101
Query: 141 PLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVE 185
L G VP ++ GNK D + + ++ARQW E
Sbjct: 102 AL-----NGKDVPIIICGNKVDCQPRLVS-------TESARQWCE 134
>gi|344264823|ref|XP_003404489.1| PREDICTED: ras-related protein Rab-32-like [Loxodonta africana]
Length = 225
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 20/146 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS+
Sbjct: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------DSKTL 74
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++ +
Sbjct: 75 VRLQLWDIAGQERFGNMTRVYYKEALGAFIVFDISRSSTFEAVLKWKNDLDSKVHL---- 130
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEG 168
P G P+P V++ NK D + G
Sbjct: 131 ----PNGSPIPAVLLANKCDQKKESG 152
>gi|194752067|ref|XP_001958344.1| GF10872 [Drosophila ananassae]
gi|190625626|gb|EDV41150.1| GF10872 [Drosophila ananassae]
Length = 219
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 25/141 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GD G GKT +V+ G+ R TIG +K I +++G +
Sbjct: 23 KIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTI----------AVEG---KQ 69
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y NGV+ V+D+++R + +LQKW E+ ++A
Sbjct: 70 IKLQIWDTAGQERFRTITQSYYRSANGVLIVYDITKRSSFANLQKWIEEVR---RYTAS- 125
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
V +++GNK D+
Sbjct: 126 --------NVLIILVGNKCDL 138
>gi|328874843|gb|EGG23208.1| Rab GTPase domain-containing protein [Dictyostelium fasciculatum]
Length = 413
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 26/149 (17%)
Query: 34 KTSLVNLIVKGSSFSRP-SQTIGCTVGVKHITYGSSGSSSNSIKGDSERDFFVELWDISG 92
K+SL++LI G+ RP S T+GC +K+ S +N + +D+F+E D+ G
Sbjct: 66 KSSLIHLICNGTVPERPPSWTLGCNTFLKY-----SCIVNNHL--SVSKDYFIEFVDVGG 118
Query: 93 HERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEI----ATSGT-FSAPLASGGP 147
+YK R Y+ ING++ V+DL+ + + +++KW E+ + SGT +S + P
Sbjct: 119 SAKYKITRPTYYTPINGLVVVYDLTNKNSLVNVKKWIFEVLNKLSQSGTSWSLKETAENP 178
Query: 148 GGL-------------PVPYVVIGNKADV 163
L +P +++GNK D+
Sbjct: 179 QLLELENTVYVHTKAPSIPLLILGNKCDL 207
>gi|41152211|ref|NP_958489.1| ras-related protein Rab-32 [Danio rerio]
gi|29437266|gb|AAH49531.1| RAB32, member RAS oncogene family [Danio rerio]
Length = 213
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 21/151 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS+
Sbjct: 15 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------DSKTL 62
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ T L
Sbjct: 63 VRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDITRGSTFEAVSKWKHDLDT----KVKL 118
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSS 173
A+G P+P V++ NK D K+G+ SS
Sbjct: 119 ANGN----PIPSVLLANKCD-QKKDGSNNSS 144
>gi|390369193|ref|XP_782400.2| PREDICTED: ras-related protein Rab-32-like [Strongylocentrotus
purpuratus]
Length = 214
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 21/154 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+GD GVGKTS++ V TIG +K I + D++
Sbjct: 13 KVLVIGDLGVGKTSVIKRYVHQFFSQHYRATIGVDFALKVINW------------DADTL 60
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ +
Sbjct: 61 IRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRVSTFEAVAKWKHDLDSKVQL---- 116
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNL 176
P G +P V++ NK D KEG +S +
Sbjct: 117 ----PNGTAIPAVLLANKCD-QTKEGLVNNSSQM 145
>gi|300120301|emb|CBK19855.2| unnamed protein product [Blastocystis hominis]
Length = 208
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 23/147 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++++++GDS VGKT ++ V + TIG + + ++ S
Sbjct: 10 LKLIILGDSSVGKTCIIQQFVFNKFSDKYKSTIGADFFPRDVMIDNTPYS---------- 59
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
V++WD +G ERY+ S Y + I DL+ +T +L+KW E
Sbjct: 60 ---VQIWDTAGQERYQSLGSSFYRGTDACILAFDLTNAKTFKNLEKWQDEF--------- 107
Query: 142 LASGGPGG-LPVPYVVIGNKADVAAKE 167
L + P L P+V++GNK DV E
Sbjct: 108 LVTAAPADPLNFPFVIVGNKVDVPESE 134
>gi|255725294|ref|XP_002547576.1| GTP-binding protein YPT7 [Candida tropicalis MYA-3404]
gi|240135467|gb|EER35021.1| GTP-binding protein YPT7 [Candida tropicalis MYA-3404]
Length = 216
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 20/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+ V + TIG K IT D+ +
Sbjct: 10 LKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEITI------------DNNK 57
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + D++ ++ +L W E S P
Sbjct: 58 QVALQIWDTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSNP 117
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
P+++IGNK DV
Sbjct: 118 --------QDFPFIIIGNKIDV 131
>gi|91082557|ref|XP_974043.1| PREDICTED: similar to lightoid CG8024-PB [Tribolium castaneum]
gi|270007568|gb|EFA04016.1| hypothetical protein TcasGA2_TC014165 [Tribolium castaneum]
Length = 371
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 21/146 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD G GKTS++ V TIG +K + + D
Sbjct: 170 KILVIGDLGAGKTSIIKRYVHRFFTQHYRATIGVDFALKVLNW------------DDNTL 217
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ERY + + Y + G V D+++ T S+ KW ++ + S
Sbjct: 218 IRLQLWDIAGQERYGNMTRVYYKEAVGAFIVFDVTRTNTFESVAKWKSDLDSKVQLS--- 274
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEG 168
G P+P V++ NK D KEG
Sbjct: 275 -----DGSPIPCVLLANKCD-QQKEG 294
>gi|357128479|ref|XP_003565900.1| PREDICTED: ras-related protein Rab7-like isoform 1 [Brachypodium
distachyon]
Length = 207
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 27/174 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKEVQI-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFEKLNSWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD-AARQWVEKQGLLPSSE 194
P+V++GNK DV G+S + + A+ W +G +P E
Sbjct: 116 --------ENFPFVLLGNKIDVDG-----GNSRTVSEKKAKAWCASKGNIPYFE 156
>gi|198428453|ref|XP_002127854.1| PREDICTED: similar to small GTP binding protein Rab27B [Ciona
intestinalis]
Length = 237
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 70/160 (43%), Gaps = 15/160 (9%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++ L++GDSGVGKT ++ + T+G +K + Y DS++
Sbjct: 27 IKFLLLGDSGVGKTCFLHRYTDKEFKQKFIATVGVDFRLKKLVYEFPEEDDE----DSKK 82
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ERY+ + G + + DL+ + S+++W EI P
Sbjct: 83 KIHLQLWDTAGQERYRSLTKAFFRDGMGFLLLFDLASENSFRSVRQWLDEIKEQAYSDEP 142
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAAR 181
V++GNK D+ ++E T + L D +
Sbjct: 143 -----------DIVLVGNKNDLDSREVTTAEAKKLADELK 171
>gi|198427811|ref|XP_002131619.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 206
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 34/186 (18%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GD GVGK+S++N + G + TIG K++ ++G +
Sbjct: 8 LKVVLIGDGGVGKSSIMNRFITGEFDGQSYHTIGVEFLTKNV----------EVEG---K 54
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+ +++WD +G ER+K R+ Y + + + ++ ++ +L+ W E
Sbjct: 55 QYTLQIWDTAGQERFKSLRTPFYRGADCCMLTYAVNDAQSFHNLKMWKQEF--------- 105
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE-----EL 196
L P+VV+GNK DV KE + A+ W + G P E E
Sbjct: 106 LYYADINDDKFPFVVLGNKVDVYDKEVQQS-------VAQNWCRENGGYPHIETSAKDET 158
Query: 197 PLTESF 202
+TE F
Sbjct: 159 NVTECF 164
>gi|242058511|ref|XP_002458401.1| hypothetical protein SORBIDRAFT_03g032810 [Sorghum bicolor]
gi|241930376|gb|EES03521.1| hypothetical protein SORBIDRAFT_03g032810 [Sorghum bicolor]
Length = 206
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 83/195 (42%), Gaps = 28/195 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + TIG K + +R
Sbjct: 10 LKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKEVLI-------------EDR 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ R+ +L W E + S P
Sbjct: 57 LVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSNRSFDTLNTWHDEFLNQASPSDP 116
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD-AARQWVEKQGLLPSSEELPLTE 200
P++++GNK DV G S + D A +W +G +P E E
Sbjct: 117 KT--------FPFILLGNKIDVDG-----GKSRVVSDKKAMEWCASKGNIPYFET-SAKE 162
Query: 201 SFPGGGGLIAAAKEA 215
+ + AK A
Sbjct: 163 DYNVDNAFLTVAKLA 177
>gi|298710038|emb|CBJ31756.1| RJL, Ras superfamily GTPase [Ectocarpus siliculosus]
Length = 206
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 29/154 (18%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+++++ +G GVGK+ L+ + S+ TIG GVK +T + G+S
Sbjct: 40 RMKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVT----------VNGESV 89
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
R + WD+SGH + + R+ Y G + V+D++ R + L++W VE A G
Sbjct: 90 R---INFWDLSGHPDFFEIRNEFYKDSQGAVLVYDVANRASFEELEQWLVEAADFGA--- 143
Query: 141 PLASGGPGGLPVPYVVIGNKAD----VAAKEGTR 170
GG+P+ V NK D V+ +EG R
Sbjct: 144 -------GGIPMA--VCANKIDKRRVVSEEEGQR 168
>gi|409083335|gb|EKM83692.1| hypothetical protein AGABI1DRAFT_81446 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426201611|gb|EKV51534.1| hypothetical protein AGABI2DRAFT_133199 [Agaricus bisporus var.
bisporus H97]
Length = 203
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 6 LKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVIV-------------DDR 52
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 53 LVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDP 112
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+GNK DV +EG R + A W + +G +P E
Sbjct: 113 --------ENFPFVVLGNKIDV--EEGKRQVTQK---RAMTWCQSKGNIPYFE 152
>gi|410923383|ref|XP_003975161.1| PREDICTED: ras-related protein Rab-27B-like [Takifugu rubripes]
Length = 213
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 72/144 (50%), Gaps = 18/144 (12%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
+++L +GDSGVGKT+ ++ + + T+G K + Y +G + G +ER
Sbjct: 10 IKLLALGDSGVGKTTFLHRYTDNKFNRKFTTTVGIDFREKRVMYTGTG-----VDGMTER 64
Query: 82 DF--FVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFS 139
+F ++LWD +G ER++ + + G + + DL+ R++ +++ W ++ +
Sbjct: 65 NFRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTNRQSFLNVRNWMSQLQANAYCD 124
Query: 140 APLASGGPGGLPVPYVVIGNKADV 163
+P V++G KAD+
Sbjct: 125 SP-----------DIVLVGTKADL 137
>gi|320588120|gb|EFX00595.1| rab-related protein 4 [Grosmannia clavigera kw1407]
Length = 229
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 19/144 (13%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGS-SFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+++L++G S VGKTSL+ + P+ TIG +H+ ++G +
Sbjct: 6 IKILIMGSSNVGKTSLLQCYLDPEFGLGNPASTIGTVYNSRHM----------RVRGMTY 55
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
R V+L D +G ER++ Y +G+IFV+DL++R+T L+ W + T+
Sbjct: 56 R---VDLIDTAGQERFRALPMHFYRGAHGIIFVYDLAKRKTFDELEGWVAQAETN----- 107
Query: 141 PLASGGPGGLPVPYVVIGNKADVA 164
+ G G+ Y +GNK D A
Sbjct: 108 IVPGAGDSGIACQYGFVGNKLDRA 131
>gi|432930637|ref|XP_004081509.1| PREDICTED: ras-related protein Rab-33B-like [Oryzias latipes]
Length = 233
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 30/166 (18%)
Query: 16 GPPTGQV-RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNS 74
GP ++ +++V+GDS VGKT L G+ + P TIG V + T G S
Sbjct: 30 GPTRARIFKIIVIGDSNVGKTCLTYRFCGGAFLTNPEATIG--VDFRERTVELDG---ES 84
Query: 75 IKGDSERDFFVELWDISGHERYKDCRSIL---YSQINGVIFVHDLSQRRTKTSLQKWAVE 131
IK +++WD +G ER++ +S++ Y ++ VIFV+D++ + S+ +W E
Sbjct: 85 IK--------LQIWDTAGQERFR--KSMVEHYYRSVHAVIFVYDVTSLPSFESIPEWIEE 134
Query: 132 IATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV 177
S PL VP V++GNK D+ + SS L+
Sbjct: 135 --CSRHLVGPL---------VPRVIVGNKCDLREQREVPASSAQLL 169
>gi|241951752|ref|XP_002418598.1| GTP-binding protein, putative [Candida dubliniensis CD36]
gi|223641937|emb|CAX43901.1| GTP-binding protein, putative [Candida dubliniensis CD36]
Length = 216
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 20/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+ V + TIG K IT D+ +
Sbjct: 10 LKVIILGDSGVGKTSLMQQFVNSKFSHQYKATIGADFLTKEITI------------DNNK 57
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + D++ ++ +L W E S P
Sbjct: 58 SVTLQIWDTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSNP 117
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
P+++IGNK DV
Sbjct: 118 --------QDFPFIIIGNKIDV 131
>gi|388581470|gb|EIM21778.1| hypothetical protein WALSEDRAFT_32360 [Wallemia sebi CBS 633.66]
Length = 208
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 26/176 (14%)
Query: 19 TGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGD 78
T ++V+++GDSGVGKTSL+N V ++ TIG K +
Sbjct: 7 TVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVVV------------- 53
Query: 79 SERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTF 138
+R ++LWD +G ER++ Y + + V+D++ ++ +L W E +
Sbjct: 54 DDRVVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFETLDSWRDEFLIQASP 113
Query: 139 SAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P + P+VV+GNK D+ ++ R S A W + +G +P E
Sbjct: 114 QDP--------VNFPFVVLGNKIDM--EDSKRAVSQK---KATSWCQSKGNIPYFE 156
>gi|118085220|ref|XP_425653.2| PREDICTED: ras-related protein Rab-38 [Gallus gallus]
gi|326914516|ref|XP_003203571.1| PREDICTED: ras-related protein Rab-38-like [Meleagris gallopavo]
Length = 212
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + TIG +K +++ D+E
Sbjct: 12 KLLVIGDLGVGKTSIIKRYVHQNFSPHYRATIGVDFALKVLSW------------DAETV 59
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ +
Sbjct: 60 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKEDLDSKLVL---- 115
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G PVP V++ NK D
Sbjct: 116 ----PNGKPVPTVLLANKCD 131
>gi|68482406|ref|XP_714835.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46436432|gb|EAK95794.1| likely rab family GTP-binding protein [Candida albicans SC5314]
Length = 217
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 20/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+ V + TIG K IT D+ +
Sbjct: 11 LKVIILGDSGVGKTSLMQQFVNSKFSHQYKATIGADFLTKEITV------------DNNK 58
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + D++ ++ +L W E S P
Sbjct: 59 SVTLQIWDTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSNP 118
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
P+++IGNK DV
Sbjct: 119 --------QDFPFIIIGNKIDV 132
>gi|440295946|gb|ELP88800.1| GTP-binding protein SAS1, putative [Entamoeba invadens IP1]
Length = 228
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 29/179 (16%)
Query: 4 KEREREN----KELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVG 59
KE E E+ K G P + + +++++G+S VGKTS++ V + PS I TVG
Sbjct: 9 KENEVEDGLVRKNAFGLPVSIEEKLILLGESAVGKTSIIQAQV--NKVFNPS--ILSTVG 64
Query: 60 VKHITYGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQR 119
V+ ++ + E F ELWD +G E+++ Y +NGVIFV D+S +
Sbjct: 65 VEKESW---------VLAAKEGLFCCELWDTAGQEKFRSVTKTAYRGVNGVIFVFDVSNK 115
Query: 120 RTKTSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD 178
++ S+ W + S G + +++ GNK D+A + T+ + D
Sbjct: 116 KSFDSINFWIDDFKKS------------EGDTMTFMLCGNKCDIAERIVTKEEAKTFAD 162
>gi|71418462|ref|XP_810857.1| ras-related GTP-binding protein [Trypanosoma cruzi strain CL
Brener]
gi|70875454|gb|EAN89006.1| ras-related GTP-binding protein, putative [Trypanosoma cruzi]
Length = 219
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 21/178 (11%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+++++ +G SGVGK+ ++ +G S+ TIG GVK ++ + S +
Sbjct: 23 RIKIISIGSSGVGKSCVIKRYCEGRFVSKYIPTIGIDYGVKRVSLRAPAHMS-----PAP 77
Query: 81 RDFFVEL--WDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTF 138
+FFV + WD++G + + + R+ Y + GV+ +D++ + +L +W E+ T
Sbjct: 78 PNFFVRVNFWDMAGRDEFLEIRNEFYYAVEGVLLFYDVTDASSFAALDEWLKEMQTY--V 135
Query: 139 SAPLASGG------PGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAA--RQWVEKQG 188
+AP +GG P P VV NK D G +V A R+W E G
Sbjct: 136 NAPRNTGGETLGVNPVKKPAIVVVCANKVD----NEVDGGKKRVVSEADGRRWAEAHG 189
>gi|224043671|ref|XP_002188382.1| PREDICTED: ras-related protein Rab-38 [Taeniopygia guttata]
Length = 212
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + TIG +K + + D+E
Sbjct: 12 KLLVIGDLGVGKTSIIKRYVHQNFSPHYRATIGVDFALKVLNW------------DAETV 59
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ +
Sbjct: 60 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKEDLDSKLVL---- 115
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G PVP V++ NK D
Sbjct: 116 ----PNGKPVPAVLLANKCD 131
>gi|167518365|ref|XP_001743523.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778622|gb|EDQ92237.1| predicted protein [Monosiga brevicollis MX1]
Length = 206
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 25/167 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVG+ G GKTS++ V S TIG +K + D +
Sbjct: 13 KVLVVGEIGTGKTSIIKRYVHQMFSSHYKATIGVDFALKVLNL------------DDDTI 60
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++QKW +I
Sbjct: 61 VRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRVSTFEAVQKWKSDIDNKVFL---- 116
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGL 189
P G +P V++ NK D+ AKEG + A ++ E++G
Sbjct: 117 ----PDGSKIPVVLLANKCDM-AKEGLVKNGA----AMDKYCEEKGF 154
>gi|190348567|gb|EDK41039.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 215
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 20/141 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+ V + TIG K IT D+ +
Sbjct: 9 LKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEITV------------DNNK 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + +D++ ++ +L W E S P
Sbjct: 57 QVTLQIWDTAGQERFQSLGVAFYRGADCCVLCYDVTNEKSLNNLASWKDEFLIQSNVSNP 116
Query: 142 LASGGPGGLPVPYVVIGNKAD 162
P+++IGNK D
Sbjct: 117 --------QDFPFIIIGNKID 129
>gi|342186413|emb|CCC95899.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 199
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 74/155 (47%), Gaps = 25/155 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++++V+GDSG GK+SL++ V+ + +QTIG G K + S R
Sbjct: 9 MKLIVLGDSGSGKSSLLHRFVEDTFVEDRTQTIGVEFGSKVVEL-------------SGR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD SG ERYK Y G + V+D++QR + S+ +W ++
Sbjct: 56 KIKLQIWDTSGQERYKSVTRSYYRGAVGCLIVYDITQRSSYESIPQWLNDVHH------- 108
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNL 176
G V +++GNK+DVA + + +L
Sbjct: 109 -----LAGQDVVVMLVGNKSDVANNRAVQHNEASL 138
>gi|356516366|ref|XP_003526866.1| PREDICTED: ras-related protein RABC1-like [Glycine max]
Length = 207
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 82/167 (49%), Gaps = 40/167 (23%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGK+SL+ L SF S TIG VK++T ++G +
Sbjct: 14 KLLMIGDSGVGKSSLL-LCFTSDSFEDLSPTIGVDFKVKYLT----------MEG---KK 59
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEIATSGTFSAP 141
+ +WD +G ER++ S Y G+I +D+++R T T+L + WA EI
Sbjct: 60 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMAYDVTRRETFTNLSEIWAKEI--------D 111
Query: 142 LASGGPGGLPVPYVVIGNKAD------VAAKEGTRGSSGNLVDAARQ 182
L S P + +++GNK D V KEG +D AR+
Sbjct: 112 LYSTNPECVK---MLVGNKVDKESDRVVTKKEG--------IDFARE 147
>gi|50728924|ref|XP_416347.1| PREDICTED: ras-related protein Rab-19 [Gallus gallus]
Length = 214
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 96/232 (41%), Gaps = 47/232 (20%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GDS VGKT +V+ G + + TIG V+ S I G +
Sbjct: 17 KIILIGDSNVGKTCVVHRFKTGQFYEKQQNTIGVDFTVR----------SMDIDGKKVK- 65
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y +G I +DL++R T S+ W E+ G + +
Sbjct: 66 --IQVWDTAGQERFRTITQSYYRSAHGAILAYDLTRRSTFESIPHWVHEVEKYGAANLVM 123
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTESF 202
++IGNK+D K L + A EK GLL E
Sbjct: 124 ------------MLIGNKSDSVDKRQV------LFEDACTLAEKYGLLAVLE-------- 157
Query: 203 PGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAPNPWSISPTHKPI 254
+AKEA+ +E + + LI R +P P S+ +P+
Sbjct: 158 -------TSAKEAQNIEEVFVLMAKELIARNTLQLHGESP-PNSVYLDSRPV 201
>gi|193631807|ref|XP_001951808.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1
[Acyrthosiphon pisum]
Length = 201
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 22/151 (14%)
Query: 18 PTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQ-TIGCTVGVKHITYGSSGSSSNSIK 76
P +V+++GD VGKT+ V V+ SFSR + T+G +K I S + +IK
Sbjct: 2 PEKLFKVIIIGDPTVGKTAFVKRYVQ-KSFSREYKGTVGVDFALKIIKV----SETETIK 56
Query: 77 GDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
++LWDI+G ER+ + Y +G + + DLS + + + KW ++
Sbjct: 57 --------LQLWDIAGQERFTWMTRVYYKDAHGCVIMFDLSNKNSFLNTLKWKKDVDAKC 108
Query: 137 TFSAPLASGGPGGLPVPYVVIGNKADVAAKE 167
T GG P+P +++GNK D+ ++
Sbjct: 109 T----QLDGG----PIPCMLLGNKCDLPQRQ 131
>gi|298712050|emb|CBJ32986.1| Rab8A, RAB family GTPase [Ectocarpus siliculosus]
Length = 205
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 25/150 (16%)
Query: 14 NGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSN 73
N P Q+++L++GDSGVGKT L+ L SFS QT T+G+
Sbjct: 4 NESPFDMQIKLLMIGDSGVGKTCLL-LRYANDSFS---QTFITTIGIDF--------KIK 51
Query: 74 SIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIA 133
+I DS+R +++WD +G ER++ + + G++ V+D++ +++ S++ W +I
Sbjct: 52 NIDLDSKR-IKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQ 110
Query: 134 TSGTFSAPLASGGPGGLPVPYVVIGNKADV 163
+ V ++IGNK D+
Sbjct: 111 Q------------HADVAVNKILIGNKCDM 128
>gi|449673505|ref|XP_004207973.1| PREDICTED: ras-related protein Rab-1A-like [Hydra magnipapillata]
Length = 386
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 71/142 (50%), Gaps = 27/142 (19%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRP-SQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
+++VVGDSGVGK+SL+N SRP + +G T+GV I SG+S IK
Sbjct: 190 KIVVVGDSGVGKSSLLNCFC-----SRPFDENLGPTIGVCDINI-ESGASKKHIK----- 238
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+ELWD +G ER++ S+ Y + + V DL+++ T S++ W +
Sbjct: 239 ---LELWDTAGEERFRGITSVFYRNAHAALIVFDLARKTTFDSVKSWIENLKR------- 288
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
G + +++ NK D+
Sbjct: 289 -----YCGEDINLLLVANKCDL 305
>gi|410913109|ref|XP_003970031.1| PREDICTED: ras-related protein Rab-27A-like [Takifugu rubripes]
Length = 220
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 20/168 (11%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++ L +GDSGVGKTS + G S+ T+G K + Y SSG+ +S +G +
Sbjct: 10 IKFLALGDSGVGKTSFLYQYTDGKFNSKFITTVGIDFREKRVIYRSSGADGSSGRG---Q 66
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ + + G + + DL+ ++ +++ W ++ +P
Sbjct: 67 KIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWMSQLQVHAYCESP 126
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGL 189
++ GNK D+ + +AAR E G+
Sbjct: 127 -----------DVILCGNKCDLVDQRAVSE------EAARDLAETYGI 157
>gi|348509548|ref|XP_003442310.1| PREDICTED: ras-related protein Rab-27A-like [Oreochromis niloticus]
Length = 220
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 30/230 (13%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++ L +GDSGVGKTS + S+ T+G K + Y S G S KG +
Sbjct: 10 IKFLALGDSGVGKTSFLYQYTDSKFNSKFITTVGIDFREKRVLYKSPGPDGTSSKG---Q 66
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ + + G + + DL+ ++ +++ W ++ P
Sbjct: 67 KIHMQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRHWMSQLQIHAYCENP 126
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
V+ GNK D++ + R S N AR+ EK G +P E+
Sbjct: 127 -----------DIVLCGNKCDLSDQ---RVISEN---QARELAEKYG-------IPYFET 162
Query: 202 FPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSD-EMPAPNPWSISPT 250
G ++ A E D +MK + + + D + A P++ P+
Sbjct: 163 SAANGHNVSQAVEVLLD--LIMKRMERCVDKSWIPDGTVRANGPFTPDPS 210
>gi|354497825|ref|XP_003511018.1| PREDICTED: ras-related protein Rab-32-like [Cricetulus griseus]
gi|344237517|gb|EGV93620.1| Ras-related protein Rab-32 [Cricetulus griseus]
Length = 223
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS
Sbjct: 25 KVLVIGELGVGKTSIIKRYVHQLFSQNYRATIGVDFALKVLNW------------DSRTL 72
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V DLS+ T ++ KW ++ +
Sbjct: 73 VRLQLWDIAGQERFGNMTRVYYKEALGAFVVFDLSRGSTFEAVLKWKSDLDSKVHL---- 128
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G P+P V++ NK D
Sbjct: 129 ----PNGSPIPAVLLANKCD 144
>gi|328871008|gb|EGG19380.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 215
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 20/146 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LVVGD G GKTS++ V TIG +K + + D +
Sbjct: 15 KILVVGDIGTGKTSIIKRFVHNIFSMHYKSTIGVDFALKVLNW------------DPRTE 62
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + G + D+++ T ++ KW +I + T A
Sbjct: 63 VRLQLWDIAGQERFGSMTRVYYKEAVGAMITFDVTRASTFEAVSKWKADIDSKVTIGAEE 122
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEG 168
P+P V++ NK D+ KEG
Sbjct: 123 K-------PIPVVLLANKCDL-GKEG 140
>gi|123975020|ref|XP_001330169.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121896140|gb|EAY01301.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 179
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 31/157 (19%)
Query: 18 PTGQVRVLVVGDSGVGKTSLVNLIVKGSSF-SRPSQTIGCTVGVKHITYGSSGSSSNSIK 76
P +++++ +G+S VGK+ L+ +G+ F ++ TIG G + ++
Sbjct: 8 PIRKIKIVSLGESRVGKSCLIKRFCEGNRFVTQYIPTIGIDYGARQFNVDNT-------- 59
Query: 77 GDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
+F+ WD+SG + Y + R+ Y +G I V D++ R T T LQ+W E
Sbjct: 60 -----NFYAHFWDMSGDDSYIEVRNEFYGDTDGYILVFDMTARETFTQLQRWIDE----- 109
Query: 137 TFSAPLASGGPGGLPVPYVVIGNKAD-----VAAKEG 168
+ GG VV GNK D V A+EG
Sbjct: 110 -------AKKYGGDITCCVVAGNKCDGAKLAVTAQEG 139
>gi|405967886|gb|EKC33005.1| Ras-related protein Rab-32 [Crassostrea gigas]
Length = 270
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 21/160 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+G+ G GKTS++ V TIG +K + + D++
Sbjct: 20 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNW------------DADTI 67
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + L
Sbjct: 68 VRLQLWDIAGQERFGNMTRVYYKEAVGCFIVFDVTRASTFDAVVKWKTDLDS----KVQL 123
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQ 182
A G PVP V++ NK D KEG +S + D ++
Sbjct: 124 ADGS----PVPCVLLANKCD-QTKEGVVNNSNQMDDFCKE 158
>gi|62857817|ref|NP_001017246.1| ras-related protein Rab-19 [Xenopus (Silurana) tropicalis]
gi|123893500|sp|Q28IZ3.1|RAB19_XENTR RecName: Full=Ras-related protein Rab-19
gi|89268291|emb|CAJ82446.1| RAB19, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 213
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 93/230 (40%), Gaps = 46/230 (20%)
Query: 13 LNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSS 72
L P +++++GDS VGKT +V+ G TIG V+++
Sbjct: 7 LEDDPFDFLFKIILIGDSNVGKTCVVHRFQSGVFAHNQQNTIGVDFTVRNM--------- 57
Query: 73 NSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEI 132
+I G + V++WD +G ER++ Y +G I +D+++R++ S+ W E
Sbjct: 58 -NINGKKVK---VQVWDTAGQERFRTITQSYYRSAHGAIIAYDITRRQSFESVPHWIYE- 112
Query: 133 ATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPS 192
+ G + ++IGNK+D+A K L + A EK GLL
Sbjct: 113 -----------AEKYGAANLMMMLIGNKSDLAEKRQI------LFEEACTLAEKHGLLAV 155
Query: 193 SEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAP 242
E +AKE+ E + + LI R F +P
Sbjct: 156 LE---------------TSAKESHNVDEVFLLMAKELIARNTFHYHSESP 190
>gi|238883588|gb|EEQ47226.1| GTP-binding protein YPT7 [Candida albicans WO-1]
Length = 217
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 20/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+ V + TIG K IT D+ +
Sbjct: 11 LKVIILGDSGVGKTSLMQQFVNSKFSHQYKATIGADFLTKEITV------------DNNK 58
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + D++ ++ +L W E S P
Sbjct: 59 SVTLQIWDTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSNP 118
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
P+++IGNK DV
Sbjct: 119 --------QDFPFIIIGNKIDV 132
>gi|395502828|ref|XP_003755776.1| PREDICTED: ras-related protein Rab-27A [Sarcophilus harrisii]
Length = 221
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 99/239 (41%), Gaps = 35/239 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++ L +GDSGVGKTSL+ G S+ T+G K + Y ++G +G +
Sbjct: 10 IKFLALGDSGVGKTSLLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAIGRG---Q 66
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ + + G + + DL+ ++ +++ W ++ +P
Sbjct: 67 RIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCESP 126
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
V+ GNK+D+ + + AR+ EK G +P E+
Sbjct: 127 -----------DVVLCGNKSDLVDQRVVKEED------ARELAEKYG-------IPYFET 162
Query: 202 FPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAPNPWSISPTHKPIQRLDEN 260
G I+ A E D +MK R D+ P S H + L+EN
Sbjct: 163 SAANGTNISKAIEMLLD--LIMK------RMERCVDKSWIPEGVVRSNGHNSTEHLNEN 213
>gi|357519975|ref|XP_003630276.1| Ras-related protein Rab-18-B [Medicago truncatula]
gi|355524298|gb|AET04752.1| Ras-related protein Rab-18-B [Medicago truncatula]
gi|388503306|gb|AFK39719.1| unknown [Medicago truncatula]
Length = 208
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 82/163 (50%), Gaps = 30/163 (18%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGK+SL+ L F S TIG VK++T I+G +
Sbjct: 15 KLLMIGDSGVGKSSLL-LRFTSDDFDDLSPTIGVDFKVKYVT----------IEGKKLK- 62
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEIATSGTFSAP 141
+ +WD +G ER++ S Y G+I V+D+++R T T+L + WA EI T
Sbjct: 63 --LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEIWAKEIDLYSTNQDC 120
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNL-VDAARQW 183
+ +++GNK D KEG R + +D AR++
Sbjct: 121 MK-----------MLVGNKVD---KEGDRVVTKKEGIDFAREY 149
>gi|157873719|ref|XP_001685364.1| putative ras-related rab-4 [Leishmania major strain Friedlin]
gi|68128436|emb|CAJ08532.1| putative ras-related rab-4 [Leishmania major strain Friedlin]
Length = 203
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 28/169 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++++V+GDSGVGK+ L++ ++ + +QTIG G K I G + +K
Sbjct: 9 MKLIVIGDSGVGKSCLLHRFIEDTFSEEQTQTIGIEYGAKIIDVGGA-----KVK----- 58
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ERYK Y G + V+D++ R + S+ +W ++
Sbjct: 59 ---LQIWDTAGQERYKSVTRSYYRGATGCLIVYDVNNRSSYESVPQWLSDVRQ------- 108
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLL 190
G V ++IGNK D+ R N A + ++ GLL
Sbjct: 109 -----LAGSDVVVMLIGNKMDLTKGNSVRAVQHN---EASLYAQQNGLL 149
>gi|18399819|ref|NP_565521.1| RAB GTPase-like protein 7A [Arabidopsis thaliana]
gi|75206208|sp|Q9SJ11.2|RABG2_ARATH RecName: Full=Ras-related protein RABG2; Short=AtRABG2; AltName:
Full=Ras-related protein Rab77; Short=AtRab77; AltName:
Full=Ras-related protein Rab7a; Short=AtRab7a
gi|15718420|dbj|BAB68377.1| AtRab77 [Arabidopsis thaliana]
gi|20198008|gb|AAD20423.2| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|21537180|gb|AAM61521.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|88193804|gb|ABD42991.1| At2g21880 [Arabidopsis thaliana]
gi|110738854|dbj|BAF01350.1| GTP-binding protein AtRab77 [Arabidopsis thaliana]
gi|330252139|gb|AEC07233.1| RAB GTPase-like protein 7A [Arabidopsis thaliana]
Length = 212
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 82/188 (43%), Gaps = 34/188 (18%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + TIG K + E+
Sbjct: 10 LKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHI-------------DEK 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ + Y + + V+D++ ++ +L W E P
Sbjct: 57 SVTLQIWDTAGQERFQSLGAAFYRGADCCVLVYDVNNLKSFETLNNWHTEFLKQANPMEP 116
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAAR--QWVEKQGLLP-----SSE 194
P+V+IGNK DV G + +V R +W +G +P + E
Sbjct: 117 ET--------FPFVLIGNKTDV------DGGNSRVVSNKRAIEWCGSKGNIPYHETSAKE 162
Query: 195 ELPLTESF 202
+ + E+F
Sbjct: 163 DTNIDEAF 170
>gi|58332248|ref|NP_001011276.1| RAB32, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|56789062|gb|AAH87989.1| RAB32, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89266817|emb|CAJ83386.1| RAB32, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 223
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 96/222 (43%), Gaps = 53/222 (23%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K I + SS
Sbjct: 24 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVINWDSSTLVR---------- 73
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ S F L
Sbjct: 74 --LQLWDIAGQERFGNMTRVYYKEAVGAFVVFDVTRGSTFEAITKWKSDL-DSKVF---L 127
Query: 143 ASGGPGGLPVPYVVIGNKAD----------------------VAAKEGTRGSSGNLVDAA 180
SGG P+P V++ NK D A E + + N+ +AA
Sbjct: 128 PSGG----PIPAVLLANKCDQKKENSLQSPHQMDNFCKENGFAAWFETSAKDNMNIDEAA 183
Query: 181 RQWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAV 222
R VE +L +++ P+ E+ G R D+EA+
Sbjct: 184 RCLVE--NILANAKNFPVEENDDGS---------IRVDQEAM 214
>gi|323450441|gb|EGB06322.1| hypothetical protein AURANDRAFT_13379, partial [Aureococcus
anophagefferens]
Length = 177
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 14/147 (9%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNS----IKGD 78
+VLV+GD GKTS++ V + T+G +K +T G ++
Sbjct: 1 KVLVLGDPATGKTSIIKRYVHNFFSNHHRTTVGVDFALKQLTVGRRAGAARVPPRVATAR 60
Query: 79 SERDFFV--ELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
RD V +LWDI+G +R+ + Y G V+D+S+ T ++ KW EI +
Sbjct: 61 DRRDTTVRLQLWDIAGQDRFGAIARVYYKDAFGAFLVYDISRPETFKTIVKWKDEIDSKV 120
Query: 137 TFSAPLASGGPGGLPVPYVVIGNKADV 163
P G+ +P V++ NK D+
Sbjct: 121 HL--------PNGMALPVVLLANKCDL 139
>gi|126310667|ref|XP_001370750.1| PREDICTED: ras-related protein Rab-32-like [Monodelphis domestica]
Length = 225
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS+
Sbjct: 28 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------DSKTL 75
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++ +
Sbjct: 76 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRGSTFDAVLKWKNDLDSKVQL---- 131
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G+P+P +++ NK D
Sbjct: 132 ----PNGIPIPTILLANKCD 147
>gi|325186904|emb|CCA21448.1| Rab18 family GTPase putative [Albugo laibachii Nc14]
Length = 201
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 75/168 (44%), Gaps = 29/168 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GD+GVGK+S++ TIG VK + SS IK
Sbjct: 9 KILLIGDAGVGKSSILLRFTDDKFDGNLQSTIGVDFKVKMMQVDSS-----RIK------ 57
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
V +WD +G ER++ S Y G++ V+D+S+R T SL W EI +P
Sbjct: 58 --VTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVSRRETFESLDTWLREIE----IYSP- 110
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLL 190
GG V +++GNK D + +R A W +G+L
Sbjct: 111 ----AGGRDVVKLLVGNKVDKQERSVSRKE-------AEDWARNKGML 147
>gi|224043799|ref|XP_002191554.1| PREDICTED: ras and EF-hand domain-containing protein-like
[Taeniopygia guttata]
Length = 708
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 25/153 (16%)
Query: 10 NKELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSG 69
N+E P +++ VG+S VGKTS + + F + T+G V+ +T +
Sbjct: 509 NEERINSVPERLFKIVFVGNSSVGKTSFLRRFCEDRFFPGTAATVGVDYNVRTVTVDHTQ 568
Query: 70 SSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWA 129
+ ++LWD +G ERY+ + + +GVI ++D++ + T T++++W
Sbjct: 569 VA-------------LQLWDTAGQERYRSITKQFFRKADGVIVMYDITAKDTFTAVKQWL 615
Query: 130 VEIATSGTFSAPLASGGPGGLPVPYVVIGNKAD 162
+ I + G +P +++GNK D
Sbjct: 616 ISIEEA------------TGENMPVLLLGNKTD 636
>gi|291384118|ref|XP_002708691.1| PREDICTED: RAB38 [Oryctolagus cuniculus]
Length = 211
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + S TIG +K + + D E
Sbjct: 11 KLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHW------------DPETV 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + T
Sbjct: 59 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTL---- 114
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G PV V++ NK D A
Sbjct: 115 ----PNGKPVSVVLLANKCDQA 132
>gi|167387463|ref|XP_001738174.1| GTP-binding protein yptV5 [Entamoeba dispar SAW760]
gi|165898751|gb|EDR25535.1| GTP-binding protein yptV5, putative [Entamoeba dispar SAW760]
Length = 207
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++++++GDSGVGK+SL+N ++ + ++ TIG K +T + ++
Sbjct: 11 LKMILIGDSGVGKSSLMNQFIEKTFTAQYKATIGADFLTKEVTINGTATT---------- 60
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +GHE++ + Y + + V D++ + SL W E + P
Sbjct: 61 ---LQIWDTAGHEKFMSFGAAFYRGSDCCLLVLDITNEASFKSLDTWKKEFLNGANVTNP 117
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+ NK D R S V +QW E G +P E
Sbjct: 118 --------NDFPFVVLVNKMD--EDPSKRAVS---VSDVKQWCENNGNIPLYE 157
>gi|357612732|gb|EHJ68147.1| hypothetical protein KGM_14978 [Danaus plexippus]
Length = 217
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 25/144 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GD G GKT +V + G+ R TIG +K + D +R
Sbjct: 22 KIVLIGDCGTGKTCIVQRLKSGNFIERHGNTIGVDFSMKTLIV------------DGKR- 68
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y NGVI V+D+++R T S+QKW E+ + + +
Sbjct: 69 VKLQIWDTAGQERFRTITQSYYRSANGVIIVYDITKRSTFLSIQKWIEEVRRYTSSNVIV 128
Query: 143 ASGGPGGLPVPYVVIGNKADVAAK 166
+ +IGNK D+ +
Sbjct: 129 S------------LIGNKCDLTEQ 140
>gi|426235199|ref|XP_004011577.1| PREDICTED: uncharacterized protein LOC101102738 [Ovis aries]
Length = 443
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS
Sbjct: 246 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------DSRTL 293
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++ +
Sbjct: 294 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRGSTFDAVLKWKSDLDSKVHL---- 349
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G P+P V++ NK D
Sbjct: 350 ----PNGSPIPAVLLANKCD 365
>gi|294955682|ref|XP_002788627.1| Rab7, putative [Perkinsus marinus ATCC 50983]
gi|239904168|gb|EER20423.1| Rab7, putative [Perkinsus marinus ATCC 50983]
Length = 215
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 90/223 (40%), Gaps = 32/223 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V + TIG K +T ++
Sbjct: 11 LKVIILGDSGVGKTSLMNQYVNKKFSPQYKATIGADFLTKEVTI-------------DDK 57
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + V+D++ ++ SL W E + P
Sbjct: 58 VVTLQIWDTAGQERFQSLGVAFYRGADCCCLVYDITNPKSFESLDSWRDEFLIQASPKDP 117
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
P+VV+GNK D+ AK + A W + +P E +S
Sbjct: 118 --------EEFPFVVVGNKLDMEAKRKVSKAR------ATTWCRSKNTIPCF-ETSAKDS 162
Query: 202 FPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAPNP 244
I A+ A ++ A+ K + Y S + NP
Sbjct: 163 LNVEQAFIEIARRALQNEAAMAKEQEQM----YLSQTLNLNNP 201
>gi|145346519|ref|XP_001417734.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577962|gb|ABO96027.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 203
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 32/155 (20%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
V++L+VGDSGVGK+SL+ + SF T+G +KH+ D R
Sbjct: 13 VKILLVGDSGVGKSSLLARFIS-DSFDEQGPTVGVDFKLKHVDV------------DGTR 59
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRT-KTSLQKWAVEIATSGTFSA 140
+ +WD +G ER++ S Y +GV+FV+D++ R + + + + W E+ GT +
Sbjct: 60 -LKLTVWDTAGQERFRTLTSSYYRGAHGVVFVYDVTSRESFENARETWRKEVEMYGTIAN 118
Query: 141 PLASGGPGGLPVPYVVIGNKAD------VAAKEGT 169
+ +VIGNK D VA KEG
Sbjct: 119 SVK-----------IVIGNKIDREDERTVARKEGV 142
>gi|149058657|gb|EDM09814.1| RAB7, member RAS oncogene family-like 1, isoform CRA_b [Rattus
norvegicus]
Length = 185
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 20/139 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + S S ++
Sbjct: 9 KVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQW----SDSEMVR------ 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ Q+W ++ + T
Sbjct: 59 --LQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKA 161
P G PVP +++ NK+
Sbjct: 113 ----PSGEPVPCLLLANKS 127
>gi|156844455|ref|XP_001645290.1| hypothetical protein Kpol_1037p28 [Vanderwaltozyma polyspora DSM
70294]
gi|156115950|gb|EDO17432.1| hypothetical protein Kpol_1037p28 [Vanderwaltozyma polyspora DSM
70294]
Length = 208
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 20/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL++ V + TIG K +T D ++
Sbjct: 9 LKVIVLGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTV------------DDDK 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ ++ +++ W E S+P
Sbjct: 57 AATMQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNSKSFENIKSWRDEFLIHANVSSP 116
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
P+V++GNK DV
Sbjct: 117 --------ETFPFVILGNKIDV 130
>gi|299116473|emb|CBN76190.1| Rab7, RAB family GTPase [Ectocarpus siliculosus]
Length = 213
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 103/235 (43%), Gaps = 41/235 (17%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++++++GDSGVGKTSL+N V R S T+G +T +++ D +
Sbjct: 9 LKIIILGDSGVGKTSLMNQYVN----KRFSNQYKATIGADFLT-------KDTVIDD--K 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + V+D++ ++ L W E +AP
Sbjct: 56 LVTLQIWDTAGQERFQSLGVAFYRGAEACVLVYDITNPKSFEQLDSWREEFLHQ---AAP 112
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
+ P P+V+IGNK D +E R S A QW + +G P S
Sbjct: 113 M---DPDNF--PFVLIGNKVD---RESERRVSRQ---RALQWCKSKGSTPISY------- 154
Query: 202 FPGGGGLIAAAKEARYDKEAVMKFFRM-LIRRRYFSDEMPAPNPWSISPTHKPIQ 255
+ +AKEA + A ++ +M LI E+ P P ++S P Q
Sbjct: 155 ------IETSAKEAVKVEGAFLEVVQMALINSAQQPPEIYVPEPITLSQAQTPYQ 203
>gi|440297613|gb|ELP90270.1| ehrab7g protein, putative [Entamoeba invadens IP1]
Length = 193
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 18 PTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKG 77
P +++++G+SGVGKTSL+N V+ S TIGC K++ Y
Sbjct: 3 PVQMFKIILIGESGVGKTSLINRYVENSFDPVYKSTIGCDFLSKNVQYEG---------- 52
Query: 78 DSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGT 137
++ +++WD +GHE++ S Y +G V D++ + ++L W E
Sbjct: 53 ---VEYVLQIWDTAGHEKFSSMISSFYRGSDGAFVVFDVTDTASFSNLDSWINE------ 103
Query: 138 FSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVE 185
FS + + VP +V GNK D+ + S A+QW +
Sbjct: 104 FSGSINN------DVPIIVCGNKTDLENRCVPTAS-------AQQWCD 138
>gi|123429816|ref|XP_001307759.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121889406|gb|EAX94829.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 191
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 23/143 (16%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
Q +V+++GDS VGKT+L++ + G + T+G + K I +
Sbjct: 3 QCKVILLGDSCVGKTTLIHRYISGEYRNDFKATLGTNITTK-------------IYTKDD 49
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
+D +WD +G ER+K SI Y + I V D + T +L W ++
Sbjct: 50 KDIEAAIWDTAGTERFKSISSIHYRDADACILVFDYTSLETFHNLSNWRQDV-------- 101
Query: 141 PLASGGPGGL-PVPYVVIGNKAD 162
L+S G L P++V GNK D
Sbjct: 102 -LSSAGIKNLDSFPFIVAGNKCD 123
>gi|340368936|ref|XP_003383006.1| PREDICTED: ras-related protein Rab-7a-like [Amphimedon
queenslandica]
Length = 206
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 98/240 (40%), Gaps = 50/240 (20%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V S+ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFTSQYKATIGADFLTKEVMV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ T +L W E + P
Sbjct: 56 LVTMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVTNANTFKTLDSWRDEFLIQASPRDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
P+VVIGNK D+ ++ + N W E + +P E
Sbjct: 116 --------ENFPFVVIGNKIDLENRQVPARRAQN-------WCESKNNIPYYE------- 153
Query: 202 FPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAPNPWSISPTHKPIQRLDENS 261
+AKEA +A K R + + +D++ P S+ P RLD N+
Sbjct: 154 --------TSAKEAVNVDQAFQKIARDALAKE--NDDIYKPQVASV-----PDIRLDSNT 198
>gi|332825172|ref|XP_001161467.2| PREDICTED: ras-related protein Rab-32 [Pan troglodytes]
gi|410212486|gb|JAA03462.1| RAB32, member RAS oncogene family [Pan troglodytes]
gi|410251312|gb|JAA13623.1| RAB32, member RAS oncogene family [Pan troglodytes]
gi|410295694|gb|JAA26447.1| RAB32, member RAS oncogene family [Pan troglodytes]
gi|410331643|gb|JAA34768.1| RAB32, member RAS oncogene family [Pan troglodytes]
Length = 225
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS
Sbjct: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------DSRTL 74
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++ +
Sbjct: 75 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHL---- 130
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G P+P V++ NK D
Sbjct: 131 ----PNGSPIPAVLLANKCD 146
>gi|323447751|gb|EGB03662.1| hypothetical protein AURANDRAFT_59604 [Aureococcus anophagefferens]
Length = 207
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 22/142 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKT+L+N V R S + T+G +T + D ++
Sbjct: 8 LKVIILGDSGVGKTALMNQYVN----KRFSASYKATIGADFLT--------KEVMIDDDK 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + I V+D++Q ++ +L W E
Sbjct: 56 LVTLQIWDTAGQERFQSLGVAFYRGADACILVYDITQPKSFDNLDSWREEF--------- 106
Query: 142 LASGGPGGLP-VPYVVIGNKAD 162
L P + P++V+GNK D
Sbjct: 107 LVQASPPDIENFPFIVLGNKVD 128
>gi|221054328|ref|XP_002258303.1| Rab7 GTPase [Plasmodium knowlesi strain H]
gi|193808372|emb|CAQ39075.1| Rab7 GTPase, putative [Plasmodium knowlesi strain H]
Length = 206
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 27/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKETIVDNENLT---------- 58
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V DL+ +T SL+ W E F
Sbjct: 59 ---MQIWDTAGQERFQSLGVAFYRGADCCVLVFDLTNYKTYESLESWKDE------FLIQ 109
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
+ P P+V+IGNK D K + QW + +P E
Sbjct: 110 ASPKDPDNF--PFVIIGNKVDETNKRKVQSLK------VMQWCKSNNNIPYFE 154
>gi|126135226|ref|XP_001384137.1| hypothetical protein PICST_67584 [Scheffersomyces stipitis CBS
6054]
gi|126091335|gb|ABN66108.1| Gtp-binding protein of the rab family [Scheffersomyces stipitis CBS
6054]
Length = 215
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 20/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+ V + TIG K I+ D +
Sbjct: 9 LKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEISI------------DGNK 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + +D++ ++ +L W E S P
Sbjct: 57 QVTLQIWDTAGQERFQSLGVAFYRGADCCVLCYDVTNEKSLNNLTSWKDEFLVQSNVSNP 116
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
P+++IGNK DV
Sbjct: 117 --------QDFPFIIIGNKIDV 130
>gi|195135342|ref|XP_002012093.1| GI16780 [Drosophila mojavensis]
gi|193918357|gb|EDW17224.1| GI16780 [Drosophila mojavensis]
Length = 219
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 25/144 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GD GKTS++ G+ R TIG +K I ++G +
Sbjct: 23 KIVLIGDCCTGKTSILQRFKTGNYVERHGNTIGVDFSMKTI----------EVEGKQVK- 71
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y NGVI V+D+++R T +LQKW E+ ++A
Sbjct: 72 --LQIWDTAGQERFRTITQSYYRANNGVIIVYDITKRATFANLQKWIEEVR---RYTAS- 125
Query: 143 ASGGPGGLPVPYVVIGNKADVAAK 166
V ++IGNK D+ ++
Sbjct: 126 --------NVLIILIGNKCDLESE 141
>gi|189534008|ref|XP_690992.3| PREDICTED: ras-related protein Rab-38-like [Danio rerio]
Length = 213
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 21/146 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+GD GVGKTS++ V TIG +K + + DS+
Sbjct: 8 KVLVIGDLGVGKTSIIKRYVHQIFSQHYRATIGVDFALKVLHW------------DSQTV 55
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ERY + + Y + G + V D+++ T ++ KW ++ L
Sbjct: 56 VRLQLWDIAGQERYGNMTRVYYREAVGALIVFDVTRSSTFDAVLKWKDDL--------DL 107
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEG 168
G PVP V++ NK+D ++EG
Sbjct: 108 KVSLNNGKPVPAVLLANKSD-QSREG 132
>gi|16741109|gb|AAH16409.1| RAB32, member RAS oncogene family [Mus musculus]
gi|33585672|gb|AAH55945.1| RAB32, member RAS oncogene family [Mus musculus]
Length = 223
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS
Sbjct: 25 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------DSRTL 72
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++ +
Sbjct: 73 VRLQLWDIAGQERFGNMTRVYYKEALGAFVVFDISRSSTFDAVLKWKNDLDSKVHL---- 128
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G P+P V++ NK D
Sbjct: 129 ----PNGSPIPAVLLANKCD 144
>gi|359806090|ref|NP_001241441.1| uncharacterized protein LOC100794330 [Glycine max]
gi|255645015|gb|ACU23007.1| unknown [Glycine max]
Length = 214
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 40/168 (23%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGK++L+ L +F S TIG VK++T G +
Sbjct: 18 KLLLIGDSGVGKSTLL-LSFTSDTFEDLSPTIGVDFKVKYVTIGG-------------KK 63
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEIATSGTFSAP 141
+ +WD +G ER++ S Y G+I V+D+++R T T+L WA EI T
Sbjct: 64 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDC 123
Query: 142 LASGGPGGLPVPYVVIGNKAD------VAAKEGTRGSSGNLVDAARQW 183
+ +++GNK D V+ KEG +D AR++
Sbjct: 124 IK-----------MLVGNKVDKESERVVSKKEG--------IDFAREY 152
>gi|126327830|ref|XP_001362365.1| PREDICTED: ras-related protein Rab-38-like [Monodelphis domestica]
Length = 211
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + S TIG +K + + D E
Sbjct: 11 KLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLQW------------DPETV 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ T
Sbjct: 59 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKSDLDAKLTL---- 114
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G PV V++ NK D
Sbjct: 115 ----PNGKPVSAVLLANKCD 130
>gi|403269920|ref|XP_003926953.1| PREDICTED: ras-related protein Rab-32, partial [Saimiri boliviensis
boliviensis]
Length = 212
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS
Sbjct: 14 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------DSRTL 61
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++ +
Sbjct: 62 VRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDISRSSTFEAVLKWKSDLDSKVHL---- 117
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G P+P V++ NK D
Sbjct: 118 ----PNGSPIPAVLLANKCD 133
>gi|395834788|ref|XP_003790374.1| PREDICTED: uncharacterized protein LOC100955231 [Otolemur
garnettii]
Length = 518
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS
Sbjct: 320 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------DSRTL 367
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++ +
Sbjct: 368 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRGSTFEAVLKWKNDLDSKVHL---- 423
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G P+P V++ NK D
Sbjct: 424 ----PNGSPIPAVLLANKCD 439
>gi|296199411|ref|XP_002747112.1| PREDICTED: ras-related protein Rab-32 [Callithrix jacchus]
Length = 225
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS
Sbjct: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------DSRTL 74
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++ +
Sbjct: 75 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHL---- 130
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G P+P V++ NK D
Sbjct: 131 ----PNGSPIPAVLLANKCD 146
>gi|189066586|dbj|BAG35836.1| unnamed protein product [Homo sapiens]
Length = 203
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + SFSR ++ TVGV S ++
Sbjct: 9 KVLVVGDAAVGKTSLVQRYSQ-DSFSRHYKS---TVGVDFALKVLQWSDYEIVR------ 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ Q+W ++ + T
Sbjct: 59 --LQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G PVP +++ NK D++
Sbjct: 113 ----PNGEPVPCLLLANKCDLS 130
>gi|13385896|ref|NP_080681.1| ras-related protein Rab-32 [Mus musculus]
gi|37999779|sp|Q9CZE3.3|RAB32_MOUSE RecName: Full=Ras-related protein Rab-32
gi|12849626|dbj|BAB28421.1| unnamed protein product [Mus musculus]
gi|23268303|gb|AAN11298.1| RAB32 [Mus musculus]
gi|26353712|dbj|BAC40486.1| unnamed protein product [Mus musculus]
gi|74186726|dbj|BAE34818.1| unnamed protein product [Mus musculus]
gi|74195856|dbj|BAE30489.1| unnamed protein product [Mus musculus]
gi|74201136|dbj|BAE37425.1| unnamed protein product [Mus musculus]
gi|112293023|dbj|BAF02889.1| Rab32 [Mus musculus]
gi|148671579|gb|EDL03526.1| RAB32, member RAS oncogene family [Mus musculus]
Length = 223
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS
Sbjct: 25 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------DSRTL 72
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++ +
Sbjct: 73 VRLQLWDIAGQERFGNMTRVYYKEALGAFVVFDISRSSTFDAVLKWKNDLDSKVHL---- 128
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G P+P V++ NK D
Sbjct: 129 ----PNGSPIPAVLLANKCD 144
>gi|440295160|gb|ELP88073.1| rab7, putative [Entamoeba invadens IP1]
Length = 200
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 21/141 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+ +++GDSGVGKTSL+N V TIG +K +T + G +
Sbjct: 8 KTILIGDSGVGKTSLINRYVNNQFSDVYKATIGSDFLIKPVT----------VNGQT--- 54
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+ +++WD +GHERY + Y + + D++ R + L+KW + + P
Sbjct: 55 YTLQIWDTAGHERYSCVVTTFYRGSDCCVLCFDVTNRESFNHLEKWKNDFIEGANLTNPG 114
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
+ VP V+GNK D
Sbjct: 115 S--------VPIFVVGNKIDC 127
>gi|74204808|dbj|BAE35466.1| unnamed protein product [Mus musculus]
Length = 223
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS
Sbjct: 25 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------DSRAL 72
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++ +
Sbjct: 73 VRLQLWDIAGQERFGNMTRVYYKEALGAFVVFDISRSSTFDAVLKWKNDLDSKVHL---- 128
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G P+P V++ NK D
Sbjct: 129 ----PNGSPIPAVLLANKCD 144
>gi|363808158|ref|NP_001242481.1| uncharacterized protein LOC100787603 [Glycine max]
gi|255639535|gb|ACU20062.1| unknown [Glycine max]
gi|255639578|gb|ACU20083.1| unknown [Glycine max]
Length = 209
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 30/163 (18%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGK+SL+ L +F S TIG VK++T G +
Sbjct: 15 KLLMIGDSGVGKSSLL-LSFTSDAFEDLSPTIGVDFKVKYVTMGG-------------KK 60
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEIATSGTFSAP 141
+ +WD +G ER++ + Y G+I V+D+++R T T+L + WA EI T
Sbjct: 61 LKLAIWDTAGQERFRTLTNSYYRGAQGIIMVYDVTRRGTFTNLSEIWAKEIDLYSTNQDC 120
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNL-VDAARQW 183
+ +++GNK D KEG R + +D AR++
Sbjct: 121 IK-----------MLVGNKVD---KEGDRVVTKKEGIDFAREY 149
>gi|326915700|ref|XP_003204151.1| PREDICTED: ras-related protein Rab-32-like [Meleagris gallopavo]
Length = 218
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 21/151 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K I + DS+
Sbjct: 20 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVINW------------DSKTL 67
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ +
Sbjct: 68 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDVTRGSTFEAVSKWKHDLDSKVLL---- 123
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSS 173
P G P+P V++ NK D K+G++ S
Sbjct: 124 ----PNGSPIPAVLLANKCD-QKKDGSQNLS 149
>gi|49473687|gb|AAT66502.1| Rab7b protein [Paramecium octaurelia]
gi|58220836|gb|AAW68046.1| Rab7b protein [Paramecium octaurelia]
Length = 206
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 27/166 (16%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GDSGVGKTSL+N V + T+G K + +R
Sbjct: 10 KIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMI-------------DDRM 56
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y + + V+D++ ++ SL W E G P
Sbjct: 57 VTLQIWDTAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDP- 115
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQG 188
P+VV+GNK D A + + S ++QW + G
Sbjct: 116 -------EHFPFVVLGNKLDKATERKVQESK------SQQWCKSHG 148
>gi|194227608|ref|XP_001496437.2| PREDICTED: hypothetical protein LOC100065954 [Equus caballus]
Length = 430
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 23/156 (14%)
Query: 15 GGPPTGQ--VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSS 72
GP T + ++LV+G+ GVGKTS++ V TIG +K + +
Sbjct: 222 AGPETREHLFKMLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------- 274
Query: 73 NSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEI 132
D+ ++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++
Sbjct: 275 -----DNRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRGSTFEAVLKWKSDL 329
Query: 133 ATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEG 168
+ P G P+P V++ NK D KEG
Sbjct: 330 DSKVHL--------PNGSPIPAVLLANKCD-QKKEG 356
>gi|195995911|ref|XP_002107824.1| hypothetical protein TRIADDRAFT_6445 [Trichoplax adhaerens]
gi|190588600|gb|EDV28622.1| hypothetical protein TRIADDRAFT_6445, partial [Trichoplax
adhaerens]
Length = 168
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 31/146 (21%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++ VGDSGVGK+S V S S TI VK++ I G +
Sbjct: 2 KIVFVGDSGVGKSSFVQCFCTDQFNSSYSATIAIDFQVKNLI----------ING---ME 48
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKW--AVEIATSGTFSA 140
++LWD +GHER++ + + +G++ V+DLS + SL++W +VE+ T
Sbjct: 49 IMLQLWDTAGHERFRSLTKSYFRKADGIVMVYDLSNPLSYASLREWMFSVEVRNYATV-- 106
Query: 141 PLASGGPGGLPVPYVVIGNKADVAAK 166
++IGNKAD+A K
Sbjct: 107 --------------MIIGNKADLADK 118
>gi|395535108|ref|XP_003769574.1| PREDICTED: ras-related protein Rab-32 [Sarcophilus harrisii]
Length = 225
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS+
Sbjct: 28 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------DSKTL 75
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++ + L
Sbjct: 76 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRESTFEAVLKWKNDLDS----KVQL 131
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
A+ G+P+P V++ NK D
Sbjct: 132 AN----GIPIPTVLLANKCD 147
>gi|145487394|ref|XP_001429702.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834393|emb|CAI44533.1| rab_B30 [Paramecium tetraurelia]
gi|124396796|emb|CAK62304.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 27/166 (16%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GDSGVGKTSL+N V + T+G K + +R
Sbjct: 10 KIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMI-------------DDRM 56
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y + + V+D++ ++ SL W E G P
Sbjct: 57 VTLQIWDTAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDP- 115
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQG 188
P+VV+GNK D A + + S ++QW + G
Sbjct: 116 -------EHFPFVVLGNKLDKATERKVQESK------SQQWCKSHG 148
>gi|402218984|gb|EJT99059.1| hypothetical protein DACRYDRAFT_24137 [Dacryopinax sp. DJM-731 SS1]
Length = 202
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 6 LKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMV-------------DDR 52
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 53 LVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDP 112
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+GNK DV +E R S A W + +G +P E
Sbjct: 113 --------ENFPFVVLGNKVDV--EESKRQVSQK---RAMTWCQSKGNIPYFE 152
>gi|167535786|ref|XP_001749566.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771958|gb|EDQ85617.1| predicted protein [Monosiga brevicollis MX1]
Length = 199
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 85/211 (40%), Gaps = 43/211 (20%)
Query: 20 GQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDS 79
G ++V+++GD GVGK+SL+ V + TIG K I +
Sbjct: 6 GLLKVVILGDGGVGKSSLMARFVNNTFDEHNYHTIGVEFLNKDIIVDNKTCH-------- 57
Query: 80 ERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFS 139
+++WD +G ERYK R Y + +FV DL+ R T L W E
Sbjct: 58 -----LQIWDTAGQERYKALRRPFYRGSDCCMFVFDLTDRHTFDHLDAWISEFKEFAEVE 112
Query: 140 APLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLT 199
P P++++GNK DV EG + + +D + ++P
Sbjct: 113 DP--------DNFPFLLVGNKVDV---EGRQVAHAQALDFCK----------GHHDMPYY 151
Query: 200 ESFPGGGGLIAAAKEARYDKEAVMKFFRMLI 230
E+ +AK A +EA + R+L+
Sbjct: 152 ET---------SAKTAENVEEAFLTAVRLLM 173
>gi|353238218|emb|CCA70171.1| probable GTPase Rab7 protein [Piriformospora indica DSM 11827]
Length = 203
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 28/174 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V S+ TIG K + +R
Sbjct: 6 LKVIILGDSGVGKTSLMNQYVNKRFSSQYKATIGADFLTKEVMV-------------DDR 52
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E
Sbjct: 53 LVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEF--------- 103
Query: 142 LASGGPGGLP-VPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
L P P+VV+GNK DV +E R + A W + +G +P E
Sbjct: 104 LIQANPQNAENFPFVVLGNKIDV--EEHKRQVTQK---RAMAWCQAKGSIPYFE 152
>gi|256053122|ref|XP_002570055.1| rab11 [Schistosoma mansoni]
gi|350645028|emb|CCD60258.1| rab11, putative [Schistosoma mansoni]
Length = 933
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 38/183 (20%)
Query: 15 GGPPTGQ-------VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGS 67
GG +G+ +V++ GDSGVGK++L++ + F+ S++ T+GV+ T
Sbjct: 3 GGSISGEDDKYDYLFKVVLTGDSGVGKSNLLSRFTRNE-FNLESKS---TIGVEFAT--- 55
Query: 68 SGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK 127
S I G R ++WD +G ERY+ + Y G + V+D+++R T +L+
Sbjct: 56 ---KSVEIDG---RTIKAQIWDTAGQERYRAITAAYYRGAVGALLVYDITKRETFNNLEH 109
Query: 128 WAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQ 187
W +E+ G + +++GNK D+ R L + A+ W E+
Sbjct: 110 WLLELR------------GHAEPDIVIMLVGNKCDL------RHLRTILTEDAKLWAERH 151
Query: 188 GLL 190
GL
Sbjct: 152 GLF 154
>gi|255075421|ref|XP_002501385.1| predicted protein [Micromonas sp. RCC299]
gi|226516649|gb|ACO62643.1| predicted protein [Micromonas sp. RCC299]
Length = 202
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 27/173 (15%)
Query: 18 PTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKG 77
P Q +++++GD G GK+SLV VKG F TIG + ++ S ++K
Sbjct: 5 PVMQAKLVLLGDMGAGKSSLVLRFVKGQFFEYQESTIGAAFLTQTVSV-----SDATVK- 58
Query: 78 DSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGT 137
E+WD +G ERY + Y I V+D+ + + W E+ G
Sbjct: 59 -------FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDIQSPSSFERAKSWVRELQRQGN 111
Query: 138 FSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLL 190
+ +A + GNKAD+A KE + D A+ + ++ GL
Sbjct: 112 ANLVMA------------LAGNKADIAEKEPEKRKVD--ADEAQAYADENGLF 150
>gi|308802790|ref|XP_003078708.1| possible apospory-associated protein (ISS) [Ostreococcus tauri]
gi|116057161|emb|CAL51588.1| possible apospory-associated protein (ISS) [Ostreococcus tauri]
Length = 209
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 30/189 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL++ V + TIG K IT + +
Sbjct: 10 LKVIILGDSGVGKTSLMSQYVNNKFSKQYKATIGADFMTKEITVDDTVVT---------- 59
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + V+ V+D++ ++ SL+ W E + S P
Sbjct: 60 ---LQIWDTAGQERFQSLGVSFYRGADCVMCVYDVNSAKSFESLENWRNEFLVQASPSDP 116
Query: 142 LASGGPGGLPVPYVVIGNKADV-AAKEGTRGSSGNLVDAARQWVEKQGLL-----PSSEE 195
P VV+GNK DV KE R S A+ W +G L + E+
Sbjct: 117 --------DKFPIVVVGNKIDVEEGKESKRVISEK---KAKSWCTSKGGLMHFECSAKED 165
Query: 196 LPLTESFPG 204
+ +T +F
Sbjct: 166 INVTAAFEA 174
>gi|50742500|ref|XP_419654.1| PREDICTED: ras-related protein Rab-32 [Gallus gallus]
Length = 218
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 21/151 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K I + DS+
Sbjct: 20 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVINW------------DSKTL 67
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ +
Sbjct: 68 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDVTRGSTFEAVSKWKHDLDSKVLL---- 123
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSS 173
P G P+P V++ NK D K+G++ S
Sbjct: 124 ----PNGSPIPAVLLANKCD-QKKDGSQNLS 149
>gi|159465968|ref|XP_001691181.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|2500075|sp|Q39573.1|YPTC5_CHLRE RecName: Full=GTP-binding protein YPTC5
gi|806726|gb|AAA82728.1| YptC5 [Chlamydomonas reinhardtii]
gi|158279153|gb|EDP04914.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 206
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 27/174 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V+ TIG K I ++
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVQKKFTKEYKATIGADFLTKEIEV-------------DDK 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ S Y + + V D++ ++ L W E
Sbjct: 56 KVTMQIWDTAGQERFQSLGSAFYRGADCCVLVFDVNNAKSFDDLDNWRDEFI-------- 107
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD-AARQWVEKQGLLPSSE 194
+ +G P P++V+GNK D GSS + + A+ W +G +P E
Sbjct: 108 IQAGPPDPDNFPFMVLGNKIDENG-----GSSRQVSEKKAKAWCASKGSIPYFE 156
>gi|323448668|gb|EGB04563.1| hypothetical protein AURANDRAFT_32238 [Aureococcus anophagefferens]
Length = 241
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 25/168 (14%)
Query: 17 PPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIK 76
P + V++LV+GD VGKT+L+ +V+ SR T G +K I +
Sbjct: 38 PASLPVKILVLGDKAVGKTALIRQLVRDEFTSRYKSTTGVDFALKEI----------DVD 87
Query: 77 GDSERDFFVELWDISGHE-RYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATS 135
G + R ++LWD++G E + Y GV+ V+D+++ T ++ W EI
Sbjct: 88 GQTVR---LQLWDVAGAETTLGSIAKVYYRDTFGVLLVYDVTRPTTFDTVTAWKREIDDK 144
Query: 136 GTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQW 183
S PVP V++GNK D+ E + L QW
Sbjct: 145 VALS--------NDEPVPVVLLGNKCDI---ETATADTAELDRFCGQW 181
>gi|344293786|ref|XP_003418601.1| PREDICTED: ras-related protein Rab-38-like [Loxodonta africana]
Length = 211
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + S TIG +K + + D E
Sbjct: 11 KLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHW------------DPETV 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + T
Sbjct: 59 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKSDLDSKLTL---- 114
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G PV V++ NK D
Sbjct: 115 ----PNGKPVSAVLLANKCD 130
>gi|325190519|emb|CCA25018.1| Rab7 family GTPase putative [Albugo laibachii Nc14]
Length = 488
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 27/168 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
+++ ++GDSGVGKTSL+N V ++ TIG K I + ++
Sbjct: 290 LKLTILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKEIVF-------------EDK 336
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + I V+D++ +T L W E F
Sbjct: 337 LVTLQIWDTAGQERFQSLGVAFYRGADACILVYDITNPKTFQKLDSWRDE------FLVQ 390
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGL 189
A P P++V+GNK D ++ R S ++ A++W E + L
Sbjct: 391 AAPRDPDAF--PFLVLGNKVD---RDSERKVS---LERAQEWCESKSL 430
>gi|291236009|ref|XP_002737937.1| PREDICTED: RAB9, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 205
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 31/201 (15%)
Query: 19 TGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGD 78
T ++V+++GD GVGK+SL+N + S+ TIG K I I G
Sbjct: 5 TQLLKVVILGDGGVGKSSLMNRFISNKFDSQSFHTIGVEFLNKDIV----------IDGH 54
Query: 79 SERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTF 138
S + +++WD +G ER+K R+ Y + + + ++ +L W E +
Sbjct: 55 S---YTLQIWDTAGQERFKSLRTPFYRGSDCCLLTFGVDDVQSFHNLNMWKKEF----LY 107
Query: 139 SAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLP-----SS 193
A + G P+VV+GNK DV +E + D A+ W E G P +
Sbjct: 108 YADVKDGD----SFPFVVLGNKVDVPPEERQVTA-----DEAKLWCEANGRSPYYETSAK 158
Query: 194 EELPLTESFPGGGGLIAAAKE 214
+ + + E+F L+ +E
Sbjct: 159 DAINVDEAFTAAVKLLLKMEE 179
>gi|66508944|ref|XP_624576.1| PREDICTED: ras-related protein Rab-43 [Apis mellifera]
Length = 219
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 25/141 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GD G GKT +V G+ R TIG +K I ++
Sbjct: 22 KIVLIGDCGTGKTCVVQRFRSGTFIERHGNTIGVDFSMKTILI-------------DDKK 68
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y NGVI V+D+++R T SLQ W E+ + L
Sbjct: 69 VKLQIWDTAGQERFRTITQSYYRSANGVIVVYDITKRSTFLSLQHWVEEVRRYTSSHVLL 128
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
++IGNK D+
Sbjct: 129 ------------ILIGNKCDL 137
>gi|391337022|ref|XP_003742873.1| PREDICTED: ras and EF-hand domain-containing protein homolog
[Metaseiulus occidentalis]
Length = 571
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 71/146 (48%), Gaps = 25/146 (17%)
Query: 18 PTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKG 77
P +V++VGDS VGK+SL+N +G + TIG VK +T ++G
Sbjct: 382 PERLFKVVIVGDSAVGKSSLINRFCQGQFVPSFNATIGVDFRVKSVT----------VEG 431
Query: 78 DSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGT 137
R ++LWD +G ER++ + + +GVI V+D++ + +++ W
Sbjct: 432 ---RPVALQLWDTAGQERFRSITKQYFRKADGVIIVYDVTSEESFKNVRAWV-------- 480
Query: 138 FSAPLASGGPGGLPVPYVVIGNKADV 163
+ L G + +++GNKAD+
Sbjct: 481 --SALQDGVTD--EIALMIVGNKADM 502
>gi|340501765|gb|EGR28507.1| hypothetical protein IMG5_173630 [Ichthyophthirius multifiliis]
Length = 289
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 24/143 (16%)
Query: 24 VLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERDF 83
+L++GD+GVGKT ++N VK ++ TI T+GV+ T + +IK
Sbjct: 73 ILLIGDAGVGKTHIINRYVK----NQLPMTIVPTIGVEFATKTVTLKEGGTIKA------ 122
Query: 84 FVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPLA 143
++WD +G E+Y+ S Y + G + V+D+++ ++ SLQKW EI L
Sbjct: 123 --QIWDTAGQEKYRSITSAHYRKAVGALLVYDVTKDKSFISLQKWLEEIRMHADNDIVL- 179
Query: 144 SGGPGGLPVPYVVIGNKADVAAK 166
+++GNK D+ K
Sbjct: 180 -----------MLVGNKVDLVEK 191
>gi|255647251|gb|ACU24093.1| unknown [Glycine max]
Length = 206
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 30/196 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + SQ T+G +T ++ D +R
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVH----KKFSQQYKATIGADFVT--------KELQID-DR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ ++ +L+ W E P
Sbjct: 56 LVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLKQANPPDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSEELPLT 199
A P++++GNK D+ G + +V A+ W +G +P E
Sbjct: 116 RA--------FPFILLGNKVDI------DGGNSRVVSEKKAKDWCAAKGNIPYFET-SAK 160
Query: 200 ESFPGGGGLIAAAKEA 215
E + + AK A
Sbjct: 161 EDYNVDAAFLCIAKAA 176
>gi|12844005|dbj|BAB26198.1| unnamed protein product [Mus musculus]
Length = 211
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + S TIG +K + + D E
Sbjct: 11 KLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHW------------DPETV 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + T
Sbjct: 59 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTL---- 114
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G PV V++ NK D
Sbjct: 115 ----PNGKPVSVVLLANKCD 130
>gi|449497012|ref|XP_004176408.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-32
[Taeniopygia guttata]
gi|449277837|gb|EMC85859.1| Ras-related protein Rab-32 [Columba livia]
Length = 218
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 21/151 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K I + DS+
Sbjct: 20 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVINW------------DSKTL 67
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ +
Sbjct: 68 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDVTRGSTFEAVSKWKHDLDSKVLL---- 123
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSS 173
P G P+P V++ NK D K+G++ S
Sbjct: 124 ----PNGSPIPAVLLANKCD-QKKDGSQNPS 149
>gi|324508005|gb|ADY43386.1| Ras and EF-hand domain-containing protein [Ascaris suum]
Length = 656
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 25/148 (16%)
Query: 16 GPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSI 75
GPP R+++ GD+ VGK+S+V IVKG T+G VK+
Sbjct: 458 GPPERTFRIVMCGDASVGKSSIVTRIVKGVFTGNLPSTLGVDFQVKNARI---------- 507
Query: 76 KGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATS 135
+++ ++LWD +G ER++ + + +G I V+D + +T ++ W I S
Sbjct: 508 ---DDKNVAIQLWDTAGQERFRSLCKSYFRRADGAILVYDCTMEQTFLGVRDWIQTIKES 564
Query: 136 GTFSAPLASGGPGGLPVPYVVIGNKADV 163
P+P ++ NK D+
Sbjct: 565 TL------------KPIPVLICANKTDL 580
>gi|403287827|ref|XP_003935127.1| PREDICTED: ras-related protein Rab-38 [Saimiri boliviensis
boliviensis]
Length = 211
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + S TIG +K + + D E
Sbjct: 11 KLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHW------------DPETV 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + T
Sbjct: 59 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTL---- 114
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G PV V++ NK D
Sbjct: 115 ----PNGKPVSVVLLANKCD 130
>gi|38194437|gb|AAR13228.1| Rab family GTPase Rab8 [Fucus distichus]
Length = 205
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 25/150 (16%)
Query: 14 NGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSN 73
N P Q+++L++GD+GVGKT L+ L SFS QT T+G+
Sbjct: 4 NDSPFDMQIKLLMIGDTGVGKTCLL-LRYANDSFS---QTFITTIGIDF--------KIK 51
Query: 74 SIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIA 133
+I DS+R +++WD +G ER++ + + G++ V+D++ +++ S++ W +I
Sbjct: 52 NIDLDSKR-IKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQ 110
Query: 134 TSGTFSAPLASGGPGGLPVPYVVIGNKADV 163
+ V ++IGNK D+
Sbjct: 111 Q------------HADVAVNKILIGNKCDM 128
>gi|1388197|gb|AAB02833.1| low-Mr GTP-binding protein Rab32 [Homo sapiens]
Length = 210
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS
Sbjct: 12 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------DSRTL 59
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++ +
Sbjct: 60 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHL---- 115
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G P+P V++ NK D
Sbjct: 116 ----PNGSPIPAVLLANKCD 131
>gi|444728470|gb|ELW68927.1| Ras-related protein Rab-38 [Tupaia chinensis]
Length = 211
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + S TIG +K + + D E
Sbjct: 11 KLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHW------------DPETV 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + T
Sbjct: 59 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTL---- 114
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G PV V++ NK D
Sbjct: 115 ----PNGKPVSVVLLANKCD 130
>gi|348565725|ref|XP_003468653.1| PREDICTED: ras-related protein Rab-38-like [Cavia porcellus]
Length = 211
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + S TIG +K + + D E
Sbjct: 11 KLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHW------------DPETV 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + T
Sbjct: 59 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTL---- 114
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G PV V++ NK D
Sbjct: 115 ----PNGKPVSVVLLANKCD 130
>gi|296216859|ref|XP_002754753.1| PREDICTED: ras-related protein Rab-38-like [Callithrix jacchus]
Length = 211
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + S TIG +K + + D E
Sbjct: 11 KLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHW------------DPETV 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + T
Sbjct: 59 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTL---- 114
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G PV V++ NK D
Sbjct: 115 ----PNGKPVSVVLLANKCD 130
>gi|242815246|ref|XP_002486532.1| ras-like GTP-binding protein, putative [Talaromyces stipitatus ATCC
10500]
gi|218714871|gb|EED14294.1| ras-like GTP-binding protein, putative [Talaromyces stipitatus ATCC
10500]
Length = 378
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 76/150 (50%), Gaps = 14/150 (9%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+ +++V+G GVGKTSLVN VK + P++ I TVG +T ++S++I
Sbjct: 71 EAKIVVLGSQGVGKTSLVNRYVKNAF--EPAK-ITSTVGASFVTKRVLDTTSDTI----- 122
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
+++WD +G ER++ + Y N + +D++ + + W E+ + S
Sbjct: 123 --VRLQIWDTAGQERFRSISRLYYRGANACLLCYDITDENSFREMTGWLQELKENLGHS- 179
Query: 141 PLASGGPGGLPVPYVVIGNKADVAAKEGTR 170
+ PG P+ V+G K+D+ A E +R
Sbjct: 180 ---NDTPGDSPLVIHVVGTKSDIVALEPSR 206
>gi|410906851|ref|XP_003966905.1| PREDICTED: ras-related protein Rab-32-like [Takifugu rubripes]
Length = 225
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 20/141 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++VLV+GD GVGKTS++ V TIG +K + + D +
Sbjct: 7 LKVLVIGDIGVGKTSIITRYVHQVFSQHYRATIGVDFALKVLNW------------DHKT 54
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWDI+G ERY + + Y + G + V D+++ T ++ KW G +
Sbjct: 55 VVRLQLWDIAGQERYGNMTRVYYKEAVGALVVFDMTRLSTFQAVLKW------KGDLDSK 108
Query: 142 LASGGPGGLPVPYVVIGNKAD 162
+A G G VP V++ NK D
Sbjct: 109 VALG--NGRTVPAVLLANKCD 127
>gi|410295692|gb|JAA26446.1| RAB32, member RAS oncogene family [Pan troglodytes]
Length = 225
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS
Sbjct: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------DSRTL 74
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++ +
Sbjct: 75 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHL---- 130
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G P+P V++ NK D
Sbjct: 131 ----PNGSPIPAVLLANKCD 146
>gi|325190517|emb|CCA25016.1| Rab7 family GTPase putative [Albugo laibachii Nc14]
Length = 510
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 27/168 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
+++ ++GDSGVGKTSL+N V ++ TIG K I + ++
Sbjct: 312 LKLTILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKEIVF-------------EDK 358
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + I V+D++ +T L W E F
Sbjct: 359 LVTLQIWDTAGQERFQSLGVAFYRGADACILVYDITNPKTFQKLDSWRDE------FLVQ 412
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGL 189
A P P++V+GNK D ++ R S ++ A++W E + L
Sbjct: 413 AAPRDPDAF--PFLVLGNKVD---RDSERKVS---LERAQEWCESKSL 452
>gi|255075683|ref|XP_002501516.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
gi|226516780|gb|ACO62774.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
Length = 206
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 21/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V + TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNRKFSKQYKATIGADFLTKEVQV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + VHD++ +T +L+ W E + + P
Sbjct: 56 LVTMQIWDTAGQERFQSLGVAFYRGADCCVLVHDVNTAKTFDNLENWRDEFLIQASPNDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
P+VV+GNK DV
Sbjct: 116 --------DNFPFVVLGNKTDV 129
>gi|126277201|ref|XP_001368456.1| PREDICTED: ras-related protein Rab-27A-like [Monodelphis domestica]
Length = 221
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 100/239 (41%), Gaps = 35/239 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++ L +GDSGVGKTSL+ G S+ T+G K + Y ++G + +G +
Sbjct: 10 IKFLALGDSGVGKTSLLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGATGRG---Q 66
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ + + G + + DL+ ++ +++ W ++ P
Sbjct: 67 RIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENP 126
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
V+ GNK+D+ + + + AR+ EK G +P E+
Sbjct: 127 -----------DIVLCGNKSDLEDQRVIK------EEEARELAEKYG-------IPYFET 162
Query: 202 FPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAPNPWSISPTHKPIQRLDEN 260
G I+ A E D +MK R D+ P S H + L+EN
Sbjct: 163 SAANGTNISKAIETLLD--LIMK------RMERCVDKSWIPEGVVRSNGHNSPEHLNEN 213
>gi|291231120|ref|XP_002735513.1| PREDICTED: RAB27A, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 223
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 101/242 (41%), Gaps = 37/242 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++ L +GDSGVGKTSL+ G+ S+ T+G K + + G+ N ++G +
Sbjct: 14 IKFLALGDSGVGKTSLLYQYTDGTFNSKFISTVGIDFREKRVMHRPKGADPN-VRG---Q 69
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ + + G I + DL+ ++ +++ W ++ P
Sbjct: 70 RVHLQLWDTAGQERFRSLTTAFFRDAMGFILLFDLTSEQSFVNIRNWIAQLQMHAYCENP 129
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
V+ GNK D+ E R S D AR+ K G LP E+
Sbjct: 130 -----------DIVLCGNKTDL---EDQRVVSE---DKARELAGKYG-------LPYFET 165
Query: 202 FPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAPNPWSISPTHKPIQRLDENS 261
G ++ A E D ++IR D P+ + P++ LDE
Sbjct: 166 SAASGSNVSKAVECLLDN--------VMIRMEQSVDISQFPHSFQNHRLGSPME-LDEAG 216
Query: 262 SD 263
D
Sbjct: 217 ED 218
>gi|157820973|ref|NP_001102372.1| ras-related protein Rab-32 [Rattus norvegicus]
gi|149039546|gb|EDL93708.1| similar to RAB32 (predicted), isoform CRA_a [Rattus norvegicus]
Length = 223
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS
Sbjct: 25 KVLVIGELGVGKTSIIKRYVHQLFSQNYRATIGVDFALKVLNW------------DSRTL 72
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++ +
Sbjct: 73 VRLQLWDIAGQERFGNMTRVYYKEALGAFVVFDISRSSTFDAVLKWKNDLDSKVHL---- 128
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G P+P V++ NK D
Sbjct: 129 ----PNGSPIPAVLLANKCD 144
>gi|395814706|ref|XP_003780884.1| PREDICTED: ras-related protein Rab-38 [Otolemur garnettii]
Length = 211
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + S TIG +K + + D E
Sbjct: 11 KLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHW------------DPETV 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + T
Sbjct: 59 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTL---- 114
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G PV V++ NK D
Sbjct: 115 ----PNGKPVSVVLLANKCD 130
>gi|367012904|ref|XP_003680952.1| hypothetical protein TDEL_0D01570 [Torulaspora delbrueckii]
gi|359748612|emb|CCE91741.1| hypothetical protein TDEL_0D01570 [Torulaspora delbrueckii]
Length = 217
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 18/170 (10%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
Q +++++GDS VGK+S+V VK S TIG + I S ++
Sbjct: 3 QFKLVLLGDSSVGKSSIVYRFVKNSFDEFRESTIGAAFLSQTIKVKESDDGEETV----- 57
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
E+WD +G ERYK + Y N + V+D++Q+ + Q W E+
Sbjct: 58 --IKFEIWDTAGQERYKSLAPMYYRNANAALVVYDVTQQDSLVKAQSWVNEL-------- 107
Query: 141 PLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLL 190
G + ++GNK D+ ++ + AR + +Q LL
Sbjct: 108 ---KNKVGDDDLVICLVGNKVDLCDEDAEDNKRAVGTEEARSYANEQNLL 154
>gi|29841194|gb|AAP06207.1| SJCHGC06552 protein [Schistosoma japonicum]
gi|226468600|emb|CAX69977.1| RAB39, member RAS oncogene family [Schistosoma japonicum]
Length = 224
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 23/142 (16%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
Q RV+++GDS VGK+SL+ V+G+ FS S T+GV S +++ E
Sbjct: 8 QFRVIIIGDSMVGKSSLMKSFVEGN-FSPVSDP---TIGVDFF--------SRTVRIQEE 55
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
++LWD +G E+++ + Y GVI V DL+ R T + W E S SA
Sbjct: 56 VFVKLQLWDTAGQEKFRSITASYYRNCVGVIIVFDLTDRETFDHISDWYEEARVSIKCSA 115
Query: 141 PLASGGPGGLPVPYVVIGNKAD 162
P+ ++V+G+KAD
Sbjct: 116 PV-----------FIVVGHKAD 126
>gi|21105857|ref|NP_082514.4| ras-related protein Rab-38 [Mus musculus]
gi|46577080|sp|Q8QZZ8.1|RAB38_MOUSE RecName: Full=Ras-related protein Rab-38
gi|20087023|gb|AAL38663.1| RAB38 [Mus musculus]
gi|20147508|gb|AAM12528.1| RAB38 [Mus musculus]
gi|26336811|dbj|BAC32089.1| unnamed protein product [Mus musculus]
gi|26344095|dbj|BAC35704.1| unnamed protein product [Mus musculus]
gi|58476762|gb|AAH89578.1| RAB38, member of RAS oncogene family [Mus musculus]
gi|74227083|dbj|BAE38335.1| unnamed protein product [Mus musculus]
gi|112293037|dbj|BAF02896.1| Rab38 [Mus musculus]
gi|148674846|gb|EDL06793.1| Rab38, member of RAS oncogene family [Mus musculus]
Length = 211
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + S TIG +K + + D E
Sbjct: 11 KLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHW------------DPETV 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + T
Sbjct: 59 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTL---- 114
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G PV V++ NK D
Sbjct: 115 ----PNGKPVSVVLLANKCD 130
>gi|623588|gb|AAA74118.1| putative [Nicotiana tabacum]
Length = 206
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 87/209 (41%), Gaps = 46/209 (22%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K I + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEIQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+ +++WD +G ER++ Y + + V+ ++ ++ +L W E + S P
Sbjct: 56 LYTLQIWDTAGQERFQSLGVAFYRGADCCVLVYYVNVMKSFENLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADV----------------AAKEG------TRGSSGNLVDA 179
P++V+GNK DV A +G T G VDA
Sbjct: 116 --------ENFPFIVLGNKIDVDGGNSRVVSEKKVKAWCASKGNIPYFETSAKEGFNVDA 167
Query: 180 ARQWVEKQGLLPSSEE---LPLTESFPGG 205
A Q + K L E+ LP T GG
Sbjct: 168 AFQCIAKNALKNEPEDEIYLPDTIDVAGG 196
>gi|348519300|ref|XP_003447169.1| PREDICTED: ras and EF-hand domain-containing protein-like
[Oreochromis niloticus]
Length = 721
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 27/166 (16%)
Query: 10 NKELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSG 69
N+E++ P ++++VG+S VGKT L+ + S T+G VK IT +S
Sbjct: 523 NEEVSTLAPERLFKIVLVGNSSVGKTCLLRRFCDEAFHPGTSATVGIDYSVKTITVDNSQ 582
Query: 70 SSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWA 129
+ ++LWD +G ERY+ + + +GV+ ++D++ + T++++W
Sbjct: 583 VA-------------LQLWDTAGQERYRSITKQFFRKADGVVVMYDITTEESFTAVRQW- 628
Query: 130 VEIATSGTFSAPLASGGPG-GLPVPYVVIGNKADVAAKEGTRGSSG 174
L S G G +P +++GNK D + + S G
Sbjct: 629 ------------LTSVKEGAGEDIPVMLLGNKTDKETEREVQKSIG 662
>gi|224093888|ref|XP_002310036.1| predicted protein [Populus trichocarpa]
gi|222852939|gb|EEE90486.1| predicted protein [Populus trichocarpa]
Length = 194
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 89/186 (47%), Gaps = 37/186 (19%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V +++ SQ T+G +T ++ D ++
Sbjct: 5 LKVIVLGDSGVGKTSLMNQYV----YNKYSQQSKATIGADFVT--------KELQID-DK 51
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++W+ +G ER++ Y + + +D++ +++ +L W E F+ P
Sbjct: 52 LVTLQIWNTAGQERFQSLGPAFYRGADCCVLEYDVNVQKSFETLNNWHEEFLKQTDFNDP 111
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLP-----SSEEL 196
A P++++GNK D+ ++ AR+W G +P + E+
Sbjct: 112 HA--------FPFILLGNKIDLDGEK-----------KAREWCASMGGIPCFETSAKEDC 152
Query: 197 PLTESF 202
+ E+F
Sbjct: 153 NIDEAF 158
>gi|109108201|ref|XP_001104269.1| PREDICTED: ras-related protein Rab-38 [Macaca mulatta]
gi|402894879|ref|XP_003910569.1| PREDICTED: ras-related protein Rab-38 [Papio anubis]
gi|355566930|gb|EHH23309.1| hypothetical protein EGK_06752 [Macaca mulatta]
Length = 211
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + S TIG +K + + D E
Sbjct: 11 KLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHW------------DPETV 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + T
Sbjct: 59 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTL---- 114
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G PV V++ NK D
Sbjct: 115 ----PNGKPVSVVLLANKCD 130
>gi|302662118|ref|XP_003022718.1| hypothetical protein TRV_03179 [Trichophyton verrucosum HKI 0517]
gi|291186678|gb|EFE42100.1| hypothetical protein TRV_03179 [Trichophyton verrucosum HKI 0517]
Length = 316
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 21/143 (14%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
Q++V+++GDSGVGKTSL+N V + TIG K + + G
Sbjct: 119 QIQVIILGDSGVGKTSLMNQYVNKKYSASYKATIGADYLTKEVM----------VDG--- 165
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
R +++WD +G ER++ Y + + V+D++ ++ +L W E
Sbjct: 166 RLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQANLRD 225
Query: 141 PLASGGPGGLPVPYVVIGNKADV 163
P + P+VV+GNK DV
Sbjct: 226 PES--------FPFVVLGNKIDV 240
>gi|334186419|ref|NP_001190694.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
gi|332657386|gb|AEE82786.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
Length = 211
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 22/174 (12%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + TIG K + G E+
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIG-------------EK 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ + Y + V+D++ R+ +L+ W E ++
Sbjct: 56 LVTLQIWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQA-WNIG 114
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD-AARQWVEKQGLLPSSE 194
+ P P++V+GNK DV GSS + D A W G +P E
Sbjct: 115 MCPSDPKTF--PFIVLGNKIDVDG-----GSSRVVSDKKAADWCASNGNIPYFE 161
>gi|332213568|ref|XP_003255895.1| PREDICTED: ras-related protein Rab-32 [Nomascus leucogenys]
Length = 225
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS
Sbjct: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------DSRTL 74
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++ +
Sbjct: 75 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHL---- 130
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G P+P V++ NK D
Sbjct: 131 ----PNGSPIPAVLLANKCD 146
>gi|303274120|gb|ADM07446.1| Rab32 [Helicoverpa armigera]
Length = 231
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 21/160 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+G+ G GKTS++ V TIG +K + + SN+I
Sbjct: 25 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNW-----DSNTI------- 72
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++
Sbjct: 73 IRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVSRVATFDAVVKWKNDLDAKVQL---- 128
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQ 182
P G P+P +++ NK D KEG S + + R+
Sbjct: 129 ----PDGSPIPCILLANKCD-QQKEGIVNSQAKMEEYCRE 163
>gi|297679366|ref|XP_002817507.1| PREDICTED: ras-related protein Rab-32 [Pongo abelii]
Length = 225
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS
Sbjct: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------DSRTL 74
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++ +
Sbjct: 75 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHL---- 130
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G P+P V++ NK D
Sbjct: 131 ----PNGSPIPAVLLANKCD 146
>gi|325190518|emb|CCA25017.1| Rab7 family GTPase putative [Albugo laibachii Nc14]
Length = 507
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 27/168 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
+++ ++GDSGVGKTSL+N V ++ TIG K I + ++
Sbjct: 309 LKLTILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKEIVF-------------EDK 355
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + I V+D++ +T L W E F
Sbjct: 356 LVTLQIWDTAGQERFQSLGVAFYRGADACILVYDITNPKTFQKLDSWRDE------FLVQ 409
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGL 189
A P P++V+GNK D ++ R S ++ A++W E + L
Sbjct: 410 AAPRDPDAF--PFLVLGNKVD---RDSERKVS---LERAQEWCESKSL 449
>gi|70953140|ref|XP_745690.1| GTP-binding protein [Plasmodium chabaudi chabaudi]
gi|56526093|emb|CAH77459.1| GTP-binding protein, putative [Plasmodium chabaudi chabaudi]
Length = 228
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 74/148 (50%), Gaps = 24/148 (16%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++++VGD+ VGKT L++ ++GS S TIG + I G+ +K
Sbjct: 11 KIILVGDATVGKTHLLSRYIRGSLPSVAKATIGVEFATRTIPLAVGGT----VKA----- 61
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++WD +G ERY+ S Y + G I V+D+++++T ++ KW EI +
Sbjct: 62 ---QIWDTAGQERYRSITSAHYRRSAGAILVYDITKKKTFLNISKWLEEIRQNSE----- 113
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTR 170
+ +++GNK D+A ++ T+
Sbjct: 114 -------KDIVIMLVGNKVDLAEEDETK 134
>gi|440803944|gb|ELR24827.1| Rasrelated protein Rab-32, putative [Acanthamoeba castellanii str.
Neff]
Length = 216
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 23/149 (15%)
Query: 16 GPPTGQV-RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNS 74
GP T + ++LVVGD G GKT+++ V+ TIG +K I
Sbjct: 12 GPATEYLYKILVVGDIGTGKTAIIRRCVENQFSESYKTTIGVDFALKTIQR--------- 62
Query: 75 IKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIAT 134
S ++LWDI+G ERY + + Y + G V DL++ + ++++W +I
Sbjct: 63 ----SNATIHLQLWDIAGQERYGNLTRVYYKEAVGAFVVFDLTRNSSFEAVKRWKEDIDN 118
Query: 135 SGTFSAPLASGGPGGLPVPYVVIGNKADV 163
P G P+P V++ NK D+
Sbjct: 119 VRL---------PNGDPLPVVLLANKCDL 138
>gi|354498049|ref|XP_003511128.1| PREDICTED: ras-related protein Rab-38-like [Cricetulus griseus]
gi|344250686|gb|EGW06790.1| Ras-related protein Rab-38 [Cricetulus griseus]
Length = 211
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + S TIG +K + + D E
Sbjct: 11 KLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHW------------DPETV 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + T
Sbjct: 59 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTL---- 114
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G PV V++ NK D
Sbjct: 115 ----PNGKPVSVVLLANKCD 130
>gi|403218485|emb|CCK72975.1| hypothetical protein KNAG_0M01220 [Kazachstania naganishii CBS
8797]
Length = 207
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 67/142 (47%), Gaps = 21/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL++ V + TIG K +T ++
Sbjct: 9 LKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDDKVAT---------- 58
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ ++ +++ W E S+P
Sbjct: 59 ---MQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNNKSFENIKTWKDEFLVHANVSSP 115
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
P+V++GNK DV
Sbjct: 116 --------ETFPFVILGNKVDV 129
>gi|302564755|ref|NP_001180823.1| ras-related protein Rab-32 [Macaca mulatta]
gi|402868027|ref|XP_003898124.1| PREDICTED: ras-related protein Rab-32 [Papio anubis]
gi|380809090|gb|AFE76420.1| ras-related protein Rab-32 [Macaca mulatta]
Length = 225
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS
Sbjct: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------DSRTL 74
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++ +
Sbjct: 75 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHL---- 130
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G P+P V++ NK D
Sbjct: 131 ----PNGSPIPAVLLANKCD 146
>gi|294867886|ref|XP_002765277.1| Rab7, putative [Perkinsus marinus ATCC 50983]
gi|239865290|gb|EEQ97994.1| Rab7, putative [Perkinsus marinus ATCC 50983]
Length = 215
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 90/223 (40%), Gaps = 32/223 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V + TIG K +T ++
Sbjct: 11 LKVIILGDSGVGKTSLMNQYVNKKFSPQYKATIGADFLTKEVTI-------------DDK 57
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + V+D++ ++ SL W E + P
Sbjct: 58 VVTLQIWDTAGQERFQSLGVAFYRGADCCCLVYDITNPKSFESLDSWRDEFLIQASPKDP 117
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
P+VV+GNK D+ AK + A W + +P E +S
Sbjct: 118 --------EEFPFVVVGNKLDMEAKRKVSKAR------ATTWCRSKDNIPCF-ETSAKDS 162
Query: 202 FPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAPNP 244
I A+ A ++ A+ K + Y S + NP
Sbjct: 163 LNVEQAFIEIARRALQNEAAMAKEQEQM----YLSQTLNLNNP 201
>gi|145532543|ref|XP_001452027.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419704|emb|CAK84630.1| unnamed protein product [Paramecium tetraurelia]
Length = 210
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 24/147 (16%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
Q++V+++GD+GVGKT ++N V+G TIG K +T G
Sbjct: 13 QLQVVLLGDAGVGKTYILNQYVRGQQPRNNLPTIGIEFATKTVTLQDGGKIQ-------- 64
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
V++WD +G ERY+ + + G + V+D+++ +T +L +W E+ T+
Sbjct: 65 ----VQIWDTAGQERYRAITTNHFRGAGGALLVYDITKEKTFENLTRWMEELKTA----- 115
Query: 141 PLASGGPGGLPVPYVVIGNKADVAAKE 167
V ++GNK D+ ++
Sbjct: 116 -------ANKDVVMYLVGNKTDLVERQ 135
>gi|58864726|emb|CAI51864.1| Rab11B protein [Plasmodium falciparum]
Length = 229
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 73/148 (49%), Gaps = 24/148 (16%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++++VGD+ VGKT L++ ++GS S TIG + I G+ +K
Sbjct: 11 KIILVGDATVGKTHLLSRYIRGSLPSVAKATIGVEFATRTIPLAVGGT----VKA----- 61
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++WD +G ERY+ S Y + G I V+D+++++T S+ KW EI +
Sbjct: 62 ---QIWDTAGQERYRSITSAHYRRSAGAILVYDITKKKTFLSISKWLEEIRQN------- 111
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTR 170
+ +++GNK D+ ++ T+
Sbjct: 112 -----ADKDIVIMLVGNKVDLTEEDETK 134
>gi|74182584|dbj|BAE34652.1| unnamed protein product [Mus musculus]
Length = 212
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 81/200 (40%), Gaps = 35/200 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
R+L++GDSGVGKT L+ S TIG +K I + G R
Sbjct: 10 RLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTI----------EVDGIKVR- 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ERY+ Y + G+ V+D+S R + KW ++
Sbjct: 59 --IQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERFYQHIMKWVSDVDEY------- 109
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGL----LPSSEELPL 198
P G V ++IGNKAD K G +Q ++ G+ + L +
Sbjct: 110 ---APEG--VQKILIGNKADEEQKRQVGREQG------QQLAKEYGMDFYETSACTNLNI 158
Query: 199 TESFPGGGGLIAAAKEARYD 218
ESF GL+ A D
Sbjct: 159 KESFTRLTGLVLQAHRKELD 178
>gi|336376735|gb|EGO05070.1| hypothetical protein SERLA73DRAFT_174086 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389693|gb|EGO30836.1| hypothetical protein SERLADRAFT_455120 [Serpula lacrymans var.
lacrymans S7.9]
Length = 203
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 6 LKVIILGDSGVGKTSLMNQYVNKRFSTQYKATIGADFLTKEVVV-------------DDR 52
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 53 LVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDP 112
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
+ P+VV+GNK DV +E R + A W + +G +P E
Sbjct: 113 ES--------FPFVVLGNKIDV--EENKRQVTQK---RAMTWCQSKGNIPYFE 152
>gi|356576109|ref|XP_003556176.1| PREDICTED: ras-related protein Rab7-like [Glycine max]
gi|3914559|sp|Q43463.1|RAB7_SOYBN RecName: Full=Ras-related protein Rab7
gi|414834|gb|AAA34004.1| Rab7p [Glycine max]
Length = 206
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 30/196 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + SQ T+G +T ++ D +R
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVH----KKFSQQYKATIGADFVT--------KELQID-DR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ ++ +L+ W E P
Sbjct: 56 LVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLKQANPPDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSEELPLT 199
A P++++GNK D+ G + +V A+ W +G +P E
Sbjct: 116 RA--------FPFILLGNKIDI------DGGNSRVVSEKKAKDWCAAKGNIPYFET-SAK 160
Query: 200 ESFPGGGGLIAAAKEA 215
E + + AK A
Sbjct: 161 EDYNVDAAFLCIAKAA 176
>gi|355752522|gb|EHH56642.1| hypothetical protein EGM_06097 [Macaca fascicularis]
Length = 244
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + S TIG +K + + D E
Sbjct: 44 KLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHW------------DPETV 91
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + T
Sbjct: 92 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTL---- 147
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G PV V++ NK D
Sbjct: 148 ----PNGKPVSVVLLANKCD 163
>gi|308080195|ref|NP_001183679.1| putative NAC domain transcription factor superfamily protein [Zea
mays]
gi|238013812|gb|ACR37941.1| unknown [Zea mays]
gi|414586248|tpg|DAA36819.1| TPA: putative NAC domain transcription factor superfamily protein
[Zea mays]
Length = 215
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 28/162 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGK+SL+ L SF S TIG VK ++ G +
Sbjct: 19 KLLLIGDSGVGKSSLL-LRFTADSFDDLSPTIGVDFKVKMVSIGG-------------KK 64
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEIATSGTFSAP 141
+ +WD +G ER++ S Y G+I V+D+S+R T T+L WA EI T
Sbjct: 65 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVSRRETFTNLSDIWAKEIDLYST---- 120
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQW 183
+++GNK D ++ G ++ AR++
Sbjct: 121 -------NQDCVKMLVGNKVDKESERAVTKKEG--IEFAREY 153
>gi|340714578|ref|XP_003395804.1| PREDICTED: ras-related protein Rab-43-like [Bombus terrestris]
gi|350411163|ref|XP_003489259.1| PREDICTED: ras-related protein Rab-43-like [Bombus impatiens]
Length = 219
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 26/156 (16%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GD G GKT +V G+ R TIG +K + ++
Sbjct: 22 KIVLIGDCGTGKTCVVQRFRSGTFIERHGNTIGVDFSMKTVLI-------------DDKK 68
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y NGVI V+D+++R T SLQ W E+ + L
Sbjct: 69 VKLQIWDTAGQERFRTITQSYYRSANGVIVVYDITKRSTFLSLQHWVEEVRRYTSSHVLL 128
Query: 143 ASGGPGGLPVPYVVIGNKADV-AAKEGTRGSSGNLV 177
+++GNK D+ + +E +G + L
Sbjct: 129 ------------ILVGNKCDLESLREVEKGEAEALC 152
>gi|226468602|emb|CAX69978.1| RAB39, member RAS oncogene family [Schistosoma japonicum]
Length = 224
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 23/142 (16%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
Q RV+++GDS VGK+SL+ V+G+ FS S T+GV S +++ E
Sbjct: 8 QFRVIIIGDSMVGKSSLMKSFVEGN-FSPVSDP---TIGVDFF--------SRTVRIQEE 55
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
++LWD +G E+++ + Y GVI V DL+ R T + W E S SA
Sbjct: 56 VFVKLQLWDTAGQEKFRSITASYYRNCVGVIIVFDLTDRETFDHISDWYEEARVSIKCSA 115
Query: 141 PLASGGPGGLPVPYVVIGNKAD 162
P+ ++V+G+KAD
Sbjct: 116 PV-----------FIVVGHKAD 126
>gi|351727491|ref|NP_001235371.1| uncharacterized protein LOC100499740 [Glycine max]
gi|255626217|gb|ACU13453.1| unknown [Glycine max]
Length = 206
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 30/196 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + SQ T+G +T ++ D +R
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVH----KKFSQQYKATIGADFVT--------KELQID-DR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ ++ +L+ W E P
Sbjct: 56 LVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLKQANPPDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSEELPLT 199
A P++++GNK D+ G + +V A+ W +G +P E
Sbjct: 116 RA--------FPFILLGNKIDI------DGGNSRVVSEKKAKDWCASKGNIPYFET-SAK 160
Query: 200 ESFPGGGGLIAAAKEA 215
E + + AK A
Sbjct: 161 EDYNVDAAFLCIAKAA 176
>gi|449686405|ref|XP_002156581.2| PREDICTED: putative Ras-related protein Rab-33-like [Hydra
magnipapillata]
Length = 238
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 28/158 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GD+ VGKT L I G+ + TIG K + IK
Sbjct: 18 KIIIIGDANVGKTCLTMRICNGTFPQKTESTIGVDFKEKIVKV-----QDELIK------ 66
Query: 83 FFVELWDISGHERYKDCRSIL---YSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFS 139
++ WD +G ER++ S++ Y ++ V+FV+D++++ + +L KW E +
Sbjct: 67 --LQFWDSAGQERFR--HSLVPHYYRNVHAVVFVYDVTKKSSFLNLSKWLEEFQVNVN-- 120
Query: 140 APLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV 177
L +P ++IGNK D+ A S N+V
Sbjct: 121 --------ANLDIPRIIIGNKCDLHANREVSSSEANMV 150
>gi|409051435|gb|EKM60911.1| hypothetical protein PHACADRAFT_247132 [Phanerochaete carnosa
HHB-10118-sp]
Length = 203
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 6 LKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMV-------------DDR 52
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 53 LVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFLIQASPHDP 112
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+GNK DV +E R S A W + +G +P E
Sbjct: 113 --------ENFPFVVLGNKIDV--EESKRQVSQK---RAMTWCQSKGNIPYFE 152
>gi|351701471|gb|EHB04390.1| Ras-related protein Rab-38 [Heterocephalus glaber]
Length = 176
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + S TIG +K + + D E
Sbjct: 11 KLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHW------------DPETV 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + T
Sbjct: 59 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTL---- 114
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G PV V++ NK D
Sbjct: 115 ----PNGKPVSVVLLANKCD 130
>gi|355714911|gb|AES05158.1| RAB38, member RAS oncoprotein family [Mustela putorius furo]
Length = 230
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + S TIG +K + + D E
Sbjct: 30 KLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHW------------DPETV 77
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + +
Sbjct: 78 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKNDLDSKLSL---- 133
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G PV V++ NK D
Sbjct: 134 ----PNGKPVSVVLLANKCD 149
>gi|358344496|ref|XP_003636325.1| Ras-related protein Rab7 [Medicago truncatula]
gi|355502260|gb|AES83463.1| Ras-related protein Rab7 [Medicago truncatula]
Length = 206
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 32/187 (17%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + SQ T+G +T ++ D +R
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVH----KKFSQQYKATIGADFVT--------KELQID-DR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ ++ +L W E S P
Sbjct: 56 LVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPSNP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD-AARQWVEKQGLLP-----SSEE 195
P++++GNK D+ G+S + D A+ W +G +P + E+
Sbjct: 116 ST--------FPFILLGNKVDIDG-----GNSRVVSDKKAKDWCASKGNVPYFETSAKED 162
Query: 196 LPLTESF 202
L + +F
Sbjct: 163 LNVDAAF 169
>gi|195012308|ref|XP_001983578.1| GH15503 [Drosophila grimshawi]
gi|193897060|gb|EDV95926.1| GH15503 [Drosophila grimshawi]
Length = 219
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 25/141 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GD GKTS++ G+ R TIG +K I ++G +
Sbjct: 23 KIVLIGDCCTGKTSILQRFKTGNYVERHGNTIGVDFSMKTI----------EVEGKQVK- 71
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y NGVI V+D+++R T +LQKW E+ ++A
Sbjct: 72 --LQIWDTAGQERFRTITQSYYRANNGVIIVYDITKRATFANLQKWIEEVR---RYTAS- 125
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
V ++IGNK D+
Sbjct: 126 --------NVLIILIGNKCDL 138
>gi|297840815|ref|XP_002888289.1| hypothetical protein ARALYDRAFT_893806 [Arabidopsis lyrata subsp.
lyrata]
gi|297334130|gb|EFH64548.1| hypothetical protein ARALYDRAFT_893806 [Arabidopsis lyrata subsp.
lyrata]
Length = 118
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 54/94 (57%), Gaps = 26/94 (27%)
Query: 93 HERYKD-CRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPLASGGPGGLP 151
H+ +D RS+ YSQI ++ A E++ + T SAPL+SGG G LP
Sbjct: 43 HQVMRDKNRSLFYSQI------------------EEMAGEVSVTRTCSAPLSSGGLGCLP 84
Query: 152 VPY----VVIGNKADVAAKEGTRGSSGNLVDAAR 181
VPY ++IGNKAD KEGT GSSGNLVD R
Sbjct: 85 VPYIFQLIIIGNKAD---KEGTNGSSGNLVDGLR 115
>gi|50411080|ref|XP_457015.1| DEHA2B01144p [Debaryomyces hansenii CBS767]
gi|49652680|emb|CAG85000.1| DEHA2B01144p [Debaryomyces hansenii CBS767]
Length = 224
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 23/144 (15%)
Query: 20 GQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDS 79
Q +++++G+S VGK+S+V+ VK + + TIG + IT + ++
Sbjct: 15 AQFKLVLLGESAVGKSSIVHRFVKNTFDNMRESTIGAAFLTQSITLPENNTTVK------ 68
Query: 80 ERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFS 139
E+WD +G ERYK + Y N + V+D++ R + T Q W E
Sbjct: 69 -----FEIWDTAGQERYKSLAPMYYRNANAALCVYDITSRSSFTKAQDWIKE-------- 115
Query: 140 APLASGGPGGLPVPYVVIGNKADV 163
L P G+ + ++GNKAD+
Sbjct: 116 --LKKQAPEGIVI--CLVGNKADL 135
>gi|189053349|dbj|BAG35135.1| unnamed protein product [Homo sapiens]
Length = 225
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS
Sbjct: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------DSRTL 74
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++ +
Sbjct: 75 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHL---- 130
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G P+P V++ NK D
Sbjct: 131 ----PNGSPIPAVLLANKCD 146
>gi|123479551|ref|XP_001322933.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121905788|gb|EAY10710.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 198
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 34/172 (19%)
Query: 20 GQVRVLVVGDSGVGKTSLVN-LIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGD 78
G +R+++VGDS VGKTSL+N L++ + + PS TVG + Y +
Sbjct: 7 GHLRIVLVGDSSVGKTSLLNQLVLHNFNKTEPS-----TVGANYQLYSYE---------E 52
Query: 79 SERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTF 138
++R +++WD +G ER++ I + + GV+ V DL+ + + +LQ W +F
Sbjct: 53 NDRKIEMQIWDTAGQERFRSLGPIYFRKAAGVVAVFDLTSKNSFVNLQSWI------DSF 106
Query: 139 SAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLL 190
+ G V NK D+ +E T A QW + G +
Sbjct: 107 T------DVAGTETIIAVAANKCDLPNQEIT-------FSVAEQWAKAHGYI 145
>gi|21955138|ref|NP_665717.1| ras-related protein Rab-38 [Rattus norvegicus]
gi|206543|gb|AAA42000.1| rab-related GTP-binding protein [Rattus norvegicus]
gi|47125439|gb|AAH70513.1| RAB38, member RAS oncogene family [Rattus norvegicus]
gi|149069033|gb|EDM18585.1| Rab38, member of RAS oncogene family [Rattus norvegicus]
Length = 211
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + S TIG +K + + D E
Sbjct: 11 KLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHW------------DPETV 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + T
Sbjct: 59 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTL---- 114
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G PV V++ NK D
Sbjct: 115 ----PNGKPVSVVLLANKCD 130
>gi|410960188|ref|XP_003986676.1| PREDICTED: ras-related protein Rab-32 [Felis catus]
Length = 225
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS
Sbjct: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------DSRTL 74
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++ +
Sbjct: 75 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRGSTFEAVLKWKSDLDSKVHL---- 130
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G P+P V++ NK D
Sbjct: 131 ----PNGSPIPAVLLANKCD 146
>gi|448097583|ref|XP_004198710.1| Piso0_002096 [Millerozyma farinosa CBS 7064]
gi|448101433|ref|XP_004199559.1| Piso0_002096 [Millerozyma farinosa CBS 7064]
gi|359380132|emb|CCE82373.1| Piso0_002096 [Millerozyma farinosa CBS 7064]
gi|359380981|emb|CCE81440.1| Piso0_002096 [Millerozyma farinosa CBS 7064]
Length = 214
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 20/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+ V + TIG K I+ D+ +
Sbjct: 9 LKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEISI------------DNNK 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + D++ ++ +L W E S P
Sbjct: 57 QVTLQIWDTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLSSWKDEFLVQSNVSNP 116
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
P+++IGNK DV
Sbjct: 117 --------QDFPFIIIGNKIDV 130
>gi|61366674|gb|AAX42891.1| RAB32 member RAS oncogene family [synthetic construct]
Length = 226
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS
Sbjct: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------DSRTL 74
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++ +
Sbjct: 75 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHL---- 130
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G P+P V++ NK D
Sbjct: 131 ----PNGSPIPAVLLANKCD 146
>gi|384496458|gb|EIE86949.1| hypothetical protein RO3G_11660 [Rhizopus delemar RA 99-880]
Length = 212
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 21/143 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LVVGD G GKTS++ V + TIG +K I +G D
Sbjct: 7 KILVVGDLGTGKTSIIRRYVHNIFSTNYKSTIGVDFALKVIQWGP--------------D 52
Query: 83 FFV--ELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
V +LWDI+G ER+ + + Y + G I V+D+++ +T + KW +I +
Sbjct: 53 IIVRLQLWDIAGQERFGNMTRVYYKEALGAIVVYDITRPQTFEGVTKWKRDI--DAKVAL 110
Query: 141 PLASGGPGGLPVPYVVIGNKADV 163
P A GG +P +++ NK D+
Sbjct: 111 PEAWGGG---QIPVILLANKTDL 130
>gi|238584079|ref|XP_002390448.1| hypothetical protein MPER_10266 [Moniliophthora perniciosa FA553]
gi|215453864|gb|EEB91378.1| hypothetical protein MPER_10266 [Moniliophthora perniciosa FA553]
Length = 203
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 33/203 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 6 LKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMV-------------DDR 52
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 53 LVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDP 112
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLP-----SSEEL 196
P+VV+GNK DV +E R + A W + +G +P + E +
Sbjct: 113 --------ENFPFVVLGNKIDV--EENKRQVTQK---RAMTWCQSKGNIPYFETSAKEAI 159
Query: 197 PLTESFP--GGGGLIAAAKEARY 217
+ ++F L A+E Y
Sbjct: 160 NVEQAFATVAKNALTQEAEEQLY 182
>gi|154342945|ref|XP_001567418.1| putative ras-related rab-4 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064750|emb|CAM42855.1| putative ras-related rab-4 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 203
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 28/169 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++++V+GDSGVGK+ L++ ++ +QTIG G K I G +K
Sbjct: 9 MKLIVIGDSGVGKSCLLHRFIEDIFSEEQTQTIGIEYGAKIIDLGGV-----KVK----- 58
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ERYK Y G + V+D+ R + S+ +W ++
Sbjct: 59 ---LQIWDTAGQERYKSVTRSYYRGATGCLIVYDVMNRSSYESVPQWLSDVRQ------- 108
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLL 190
G V ++IGNK DVA R N A + ++ GLL
Sbjct: 109 -----LAGSDVVVMLIGNKIDVAKGNSLRAVQHN---EASLYAQQNGLL 149
>gi|170574283|ref|XP_001892746.1| Ras-related protein ypt4 [Brugia malayi]
gi|158601556|gb|EDP38449.1| Ras-related protein ypt4, putative [Brugia malayi]
Length = 211
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+V+V+G SGVGK+S VN + PS T+GC V V Y +GS+ E+
Sbjct: 12 KVVVLGSSGVGKSSFVNAVCNRHDII-PSSTVGCAVSVIAHQY-RAGSTD-------EQT 62
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWA 129
+ELWDI G ++ + G I VHDLS ++++++L +W
Sbjct: 63 ELIELWDIGGSTVHQKASVNFFEGATGAILVHDLSNKKSESNLSQWV 109
>gi|1370182|emb|CAA98168.1| RAB7A [Lotus japonicus]
Length = 205
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 30/196 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + SQ T+G +T ++ D +R
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVH----KKFSQQYKATIGADFVT--------KELQID-DR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ ++ +L W E S P
Sbjct: 56 LVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSEELPLT 199
P++++GNK D+ G + +V A+ W +G +P E
Sbjct: 116 RT--------FPFILLGNKIDI------DGGNSRVVSEKKAKDWCASKGNIPYFET-SAK 160
Query: 200 ESFPGGGGLIAAAKEA 215
E + + AK A
Sbjct: 161 EDYNVDAAFLCIAKTA 176
>gi|5803133|ref|NP_006825.1| ras-related protein Rab-32 [Homo sapiens]
gi|2833245|sp|Q13637.3|RAB32_HUMAN RecName: Full=Ras-related protein Rab-32
gi|20379092|gb|AAM21106.1|AF498958_1 small GTP binding protein RAB32 [Homo sapiens]
gi|1575792|gb|AAB09599.1| low Mr GTP-binding protein Rab32 [Homo sapiens]
gi|15929226|gb|AAH15061.1| RAB32, member RAS oncogene family [Homo sapiens]
gi|54696894|gb|AAV38819.1| RAB32, member RAS oncogene family [Homo sapiens]
gi|61356867|gb|AAX41298.1| RAB32 member RAS oncogene family [synthetic construct]
gi|119568218|gb|EAW47833.1| RAB32, member RAS oncogene family [Homo sapiens]
gi|123987477|gb|ABM83808.1| RAB32, member RAS oncogene family [synthetic construct]
gi|123999094|gb|ABM87130.1| RAB32, member RAS oncogene family [synthetic construct]
gi|261861624|dbj|BAI47334.1| RAB32, member RAS oncogene family [synthetic construct]
Length = 225
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS
Sbjct: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------DSRTL 74
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++ +
Sbjct: 75 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHL---- 130
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G P+P V++ NK D
Sbjct: 131 ----PNGSPIPAVLLANKCD 146
>gi|256071955|ref|XP_002572303.1| rab-18 [Schistosoma mansoni]
gi|353229802|emb|CCD75973.1| putative rab-18 [Schistosoma mansoni]
Length = 211
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 23/157 (14%)
Query: 14 NGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSN 73
NG ++L++GDSGVGK+SL+ S+ S TIG VKH+T
Sbjct: 4 NGNELLVNFKLLLIGDSGVGKSSLLMRYTNDCFESQLSATIGVDFKVKHVTV----PDGT 59
Query: 74 SIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIA 133
IK + +WD +G ER++ +Y + +FV D+S R + L W E+
Sbjct: 60 KIK--------LSIWDTAGQERFRTLTPNVYRGSHAAVFVFDVSNRESFDHLNSWMEELK 111
Query: 134 TSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTR 170
T S P + +++GNK D ++E +R
Sbjct: 112 T--------YSDNPDMIK---LLVGNKIDNISREISR 137
>gi|71663090|ref|XP_818542.1| small GTP-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70883800|gb|EAN96691.1| small GTP-binding protein, putative [Trypanosoma cruzi]
Length = 243
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 18/141 (12%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VL++G+ G GKT L+ V G + TIG +K + + ++ R+
Sbjct: 12 KVLIIGEGGTGKTCLIRRYVHGIFLATNKATIGVDFALKDVVHAAT-----------NRN 60
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ERY + Y G I V D+++ T KW ++ S F
Sbjct: 61 ITLQLWDIAGQERYGQMTRVYYQAAAGAIIVADITRPETLDLAVKWKQDV-DSKVFL--- 116
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
G G +P +++ NK D+
Sbjct: 117 ---GSSGKSIPCILLINKVDL 134
>gi|50286745|ref|XP_445802.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525108|emb|CAG58721.1| unnamed protein product [Candida glabrata]
Length = 208
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 71/142 (50%), Gaps = 20/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL++ V + SQ T+G +T + D ++
Sbjct: 9 LKVIILGDSGVGKTSLMHRYVN----DKYSQQYKATIGADFLT--------KEVVLDDDK 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ ++ +++ W E S+P
Sbjct: 57 VVTMQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNAKSFENIKSWKDEFLVHANISSP 116
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
+ P+V++GNK D+
Sbjct: 117 ES--------FPFVILGNKVDI 130
>gi|357136165|ref|XP_003569676.1| PREDICTED: ras-related protein Rab7-like [Brachypodium distachyon]
Length = 206
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 26/194 (13%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + TIG K + +R
Sbjct: 10 LKVIVLGDSGVGKTSLMNQYVHNKFSQQYKATIGADFVTKEVLI-------------EDR 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ R+ +L W E + S P
Sbjct: 57 LVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVNRSFDTLNTWHDEFLNQASPSDP 116
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
P++++GNK DV + S A +W +G +P E E
Sbjct: 117 KT--------FPFILLGNKIDVDGGKSRVVSEKK----AIEWCSSKGNIPYYET-SAKED 163
Query: 202 FPGGGGLIAAAKEA 215
+ ++ AK A
Sbjct: 164 YNVDDAFLSVAKLA 177
>gi|60834171|gb|AAX37082.1| RAB7 member RAS oncogene family-like 1 [synthetic construct]
Length = 204
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + S ++
Sbjct: 9 KVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQW----SDYEIVR------ 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ Q+W ++ + T
Sbjct: 59 --LQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G PVP +++ NK D++
Sbjct: 113 ----PNGEPVPCLLLANKCDLS 130
>gi|55731507|emb|CAH92465.1| hypothetical protein [Pongo abelii]
Length = 203
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + S ++
Sbjct: 9 KVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQW----SDYEIVR------ 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ Q+W ++ + T
Sbjct: 59 --LQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G PVP +++ NK D++
Sbjct: 113 ----PNGEPVPCLLLANKCDLS 130
>gi|54696892|gb|AAV38818.1| RAB32, member RAS oncogene family [synthetic construct]
gi|61366667|gb|AAX42890.1| RAB32 member RAS oncogene family [synthetic construct]
Length = 226
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS
Sbjct: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------DSRTL 74
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++ +
Sbjct: 75 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHL---- 130
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G P+P V++ NK D
Sbjct: 131 ----PNGSPIPAVLLANKCD 146
>gi|4506375|ref|NP_003920.1| ras-related protein Rab-7L1 isoform 1 [Homo sapiens]
gi|197101399|ref|NP_001126387.1| ras-related protein Rab-7L1 [Pongo abelii]
gi|208609962|ref|NP_001129134.1| ras-related protein Rab-7L1 isoform 1 [Homo sapiens]
gi|114572136|ref|XP_001162514.1| PREDICTED: uncharacterized protein LOC469654 isoform 4 [Pan
troglodytes]
gi|332248154|ref|XP_003273227.1| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Nomascus
leucogenys]
gi|332248156|ref|XP_003273228.1| PREDICTED: ras-related protein Rab-7L1 isoform 2 [Nomascus
leucogenys]
gi|332811507|ref|XP_001162387.2| PREDICTED: uncharacterized protein LOC469654 isoform 1 [Pan
troglodytes]
gi|397504834|ref|XP_003822985.1| PREDICTED: ras-related protein Rab-7L1 [Pan paniscus]
gi|397504836|ref|XP_003822986.1| PREDICTED: ras-related protein Rab-7L1 [Pan paniscus]
gi|13633364|sp|O14966.1|RAB7L_HUMAN RecName: Full=Ras-related protein Rab-7L1; AltName: Full=Rab-7-like
protein 1
gi|75054849|sp|Q5R7A4.1|RAB7L_PONAB RecName: Full=Ras-related protein Rab-7L1; AltName: Full=Rab-7-like
protein 1
gi|2388544|dbj|BAA22160.1| small GTP-binding protein [Homo sapiens]
gi|12803517|gb|AAH02585.1| RAB7, member RAS oncogene family-like 1 [Homo sapiens]
gi|49456973|emb|CAG46807.1| RAB7L1 [Homo sapiens]
gi|54695950|gb|AAV38347.1| RAB7, member RAS oncogene family-like 1 [Homo sapiens]
gi|55731284|emb|CAH92356.1| hypothetical protein [Pongo abelii]
gi|61357258|gb|AAX41360.1| RAB7 member RAS oncogene family-like 1 [synthetic construct]
gi|119611986|gb|EAW91580.1| RAB7, member RAS oncogene family-like 1, isoform CRA_a [Homo
sapiens]
gi|119611987|gb|EAW91581.1| RAB7, member RAS oncogene family-like 1, isoform CRA_a [Homo
sapiens]
gi|123982028|gb|ABM82843.1| RAB7, member RAS oncogene family-like 1 [synthetic construct]
gi|124000657|gb|ABM87837.1| RAB7, member RAS oncogene family-like 1 [synthetic construct]
gi|157928318|gb|ABW03455.1| RAB7, member RAS oncogene family-like 1 [synthetic construct]
gi|261859934|dbj|BAI46489.1| RAB7, member RAS oncogene family-like 1 [synthetic construct]
gi|410211350|gb|JAA02894.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410211352|gb|JAA02895.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410211354|gb|JAA02896.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410211356|gb|JAA02897.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410211358|gb|JAA02898.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410211360|gb|JAA02899.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410211362|gb|JAA02900.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410256832|gb|JAA16383.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410256834|gb|JAA16384.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410256836|gb|JAA16385.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410256838|gb|JAA16386.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410287094|gb|JAA22147.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410287096|gb|JAA22148.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410287098|gb|JAA22149.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410287100|gb|JAA22150.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410287102|gb|JAA22151.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410329207|gb|JAA33550.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410329209|gb|JAA33551.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410329211|gb|JAA33552.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
Length = 203
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + S ++
Sbjct: 9 KVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQW----SDYEIVR------ 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ Q+W ++ + T
Sbjct: 59 --LQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G PVP +++ NK D++
Sbjct: 113 ----PNGEPVPCLLLANKCDLS 130
>gi|31199429|ref|XP_308662.1| AGAP007096-PA [Anopheles gambiae str. PEST]
gi|21291806|gb|EAA03951.1| AGAP007096-PA [Anopheles gambiae str. PEST]
Length = 220
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 25/141 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GD G GKT +V G+ TIG +K + S+ G +
Sbjct: 23 KIVLIGDCGTGKTCIVQRFKSGNFIESHGNTIGVDFSMKAV----------SVDGKKVK- 71
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y NGV+ V+D+++R T SLQ+W E+ ++A
Sbjct: 72 --LQIWDTAGQERFRTITQSYYRSANGVLIVYDITKRSTFLSLQRWIDEVR---RYTAS- 125
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
V VIGNK+D+
Sbjct: 126 --------NVMIFVIGNKSDL 138
>gi|443722950|gb|ELU11591.1| hypothetical protein CAPTEDRAFT_21782 [Capitella teleta]
Length = 205
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 77/174 (44%), Gaps = 30/174 (17%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ T +L W E + P
Sbjct: 56 LVTMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVTVPNTFKTLDSWRDEFLIQASPRDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKE-GTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VVIGNK D+ + TR A+QW + +G +P E
Sbjct: 116 --------ENFPFVVIGNKIDLENRAVSTR--------RAQQWCQTKGDIPYFE 153
>gi|30024664|gb|AAP13582.1|AF407337_1 Ras-related protein Rab7 [Lentinula edodes]
Length = 203
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 33/203 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 6 LKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMV-------------DDR 52
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 53 LVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDP 112
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLP-----SSEEL 196
P+VV+GNK DV +E R + A W + +G +P + E +
Sbjct: 113 --------ENFPFVVLGNKIDV--EENKRQVTQK---RAMTWCQSKGNIPYFETSAKEAI 159
Query: 197 PLTESFP--GGGGLIAAAKEARY 217
+ ++F L A+E Y
Sbjct: 160 NVEQAFQTVAKNALTQEAEEQLY 182
>gi|255712835|ref|XP_002552700.1| KLTH0C11132p [Lachancea thermotolerans]
gi|238934079|emb|CAR22262.1| KLTH0C11132p [Lachancea thermotolerans CBS 6340]
Length = 208
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 68/142 (47%), Gaps = 20/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL++ V + TIG K +T D ++
Sbjct: 9 LKVIILGDSGVGKTSLMHRYVNDKFSQQYKATIGADFLTKEVTM------------DGDK 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ ++ +++ W E S+P
Sbjct: 57 VATMQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNAKSFENIKSWRDEFLVHANVSSP 116
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
P+V++GNK DV
Sbjct: 117 --------ETFPFVILGNKLDV 130
>gi|156097076|ref|XP_001614571.1| small GTPase Rab7 [Plasmodium vivax Sal-1]
gi|148803445|gb|EDL44844.1| small GTPase Rab7, putative [Plasmodium vivax]
Length = 206
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 73/173 (42%), Gaps = 27/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K D+E
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKETIV------------DNEH 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V DL+ +T SL+ W E F
Sbjct: 57 -LTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDLTNYKTYESLESWKDE------FLIQ 109
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
+ P P+V+IGNK D K + QW + +P E
Sbjct: 110 ASPKDPDNF--PFVIIGNKVDETNKRKVQSLK------VLQWCKSNNNIPYFE 154
>gi|260824890|ref|XP_002607400.1| hypothetical protein BRAFLDRAFT_204961 [Branchiostoma floridae]
gi|229292747|gb|EEN63410.1| hypothetical protein BRAFLDRAFT_204961 [Branchiostoma floridae]
Length = 180
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 21/160 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD G GKTS++ V TIG +K I + D++
Sbjct: 14 KILVIGDLGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVINW------------DADTL 61
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ +
Sbjct: 62 IRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDVTRASTFEAVSKWKNDLDSKVQL---- 117
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQ 182
P G +P V++ NK D AKEG ++ + + ++
Sbjct: 118 ----PNGQSIPAVLLANKCD-QAKEGMVNNTSQMDEYCKE 152
>gi|388492594|gb|AFK34363.1| unknown [Medicago truncatula]
Length = 206
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 87/195 (44%), Gaps = 28/195 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + SQ T+G +T ++ D +R
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVH----KKFSQQYKATIGADFVT--------KELQID-DR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ ++ +L W E P
Sbjct: 56 LVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPFNP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD-AARQWVEKQGLLPSSEELPLTE 200
P++++GNK D+ G+S + D A++W +G +P E E
Sbjct: 116 ST--------FPFILLGNKVDIDG-----GNSRVVFDKKAKEWCASKGNVPYFETFA-KE 161
Query: 201 SFPGGGGLIAAAKEA 215
+ AK A
Sbjct: 162 DLNVDAAFLRIAKTA 176
>gi|255720040|ref|XP_002556300.1| KLTH0H09768p [Lachancea thermotolerans]
gi|238942266|emb|CAR30438.1| KLTH0H09768p [Lachancea thermotolerans CBS 6340]
Length = 229
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 28/188 (14%)
Query: 5 ERERENKELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHIT 64
+R +NK N Q +++++GDS VGK+S+V+ VK S TIG
Sbjct: 10 KRAHQNKRYNTATML-QFKLVLLGDSSVGKSSIVHRFVKDSFDEFRESTIG--------- 59
Query: 65 YGSSGSSSNSIKGDSERDFFV--ELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTK 122
+ S +IK + D + E+WD +G ERYK + Y N + V+D++Q +
Sbjct: 60 ---AAFLSQTIKLEKHPDVTIKFEIWDTAGQERYKSLAPMYYRNANAALIVYDVTQPGSL 116
Query: 123 TSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQ 182
Q W E+ G + + GNK D+ ++ T + A+
Sbjct: 117 VKAQSWVEEL-----------KNKVGDQDLVICLAGNKVDICDEDATAREVQR--EDAQL 163
Query: 183 WVEKQGLL 190
+ ++QGLL
Sbjct: 164 YAQEQGLL 171
>gi|389582872|dbj|GAB65608.1| small GTPase Rab7 [Plasmodium cynomolgi strain B]
Length = 184
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 73/173 (42%), Gaps = 27/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K D+E
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKETIV------------DNEH 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V DL+ +T SL+ W E F
Sbjct: 57 -LTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDLTNYKTYESLESWKDE------FLIQ 109
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
+ P P+V+IGNK D K + QW + +P E
Sbjct: 110 ASPKDPDNF--PFVIIGNKVDETNKRKVQSLK------VLQWCKSNNNIPYFE 154
>gi|390357473|ref|XP_782114.3| PREDICTED: ras-related protein Rab-39B-like [Strongylocentrotus
purpuratus]
Length = 240
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 28/164 (17%)
Query: 11 KELNGGPPT----GQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYG 66
+EL G PP Q R+++VGDS VGK+SL+ G T+G + I
Sbjct: 19 EELAGLPPEVIWEYQFRLILVGDSTVGKSSLLRRFCDGKFVEVSDPTVGVDFYARLIEVA 78
Query: 67 SSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQ 126
R ++LWD +G ER++ + Y GV+ V+D+S R++ +LQ
Sbjct: 79 PG------------RRVKLQLWDTAGQERFRSITTSYYRNSVGVMLVYDISNRQSFENLQ 126
Query: 127 KWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTR 170
+W +E + + P ++ Y+V+G+K+D+ E TR
Sbjct: 127 EWLIEAQENVIY--PHST--------TYMVVGHKSDLG--EDTR 158
>gi|255634504|gb|ACU17616.1| unknown [Glycine max]
Length = 206
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 30/196 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + SQ T+G +T ++ D +R
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVH----KKFSQQYKATIGADSVT--------KELQID-DR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ ++ +L+ W E P
Sbjct: 56 LVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLKQANPPDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSEELPLT 199
A P++++GNK D+ G + +V A+ W +G +P E
Sbjct: 116 RA--------FPFILLGNKIDI------DGGNSRVVSEKKAKDWCAAKGNIPYFET-SAK 160
Query: 200 ESFPGGGGLIAAAKEA 215
E + + AK A
Sbjct: 161 EDYNVDAAFLCIAKAA 176
>gi|256071416|ref|XP_002572036.1| rab11 [Schistosoma mansoni]
gi|350645030|emb|CCD60260.1| rab11, putative [Schistosoma mansoni]
Length = 218
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 89/185 (48%), Gaps = 38/185 (20%)
Query: 13 LNGGPPTGQ-------VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITY 65
+ GG +G+ +V+++GDSGVGK++L++ + + F+ S++ T+GV+ T
Sbjct: 1 MYGGSMSGKDDEYDYLFKVVLIGDSGVGKSNLLSRFTR-NEFNLESKS---TIGVEFAT- 55
Query: 66 GSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSL 125
S I G R ++WD +G ERY+ + Y G + V+D+++R T +L
Sbjct: 56 -----KSVEIDG---RTIKAQIWDTAGQERYRAITAAYYRGAVGALLVYDITKRETFNNL 107
Query: 126 QKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVE 185
+ W +E+ + L + +++GNK D+ + + A+ W E
Sbjct: 108 EHWLLELRNNVE------------LDMVVMLVGNKCDLRHLRTVQ------TEDAKLWAE 149
Query: 186 KQGLL 190
+ GL
Sbjct: 150 RHGLF 154
>gi|123470469|ref|XP_001318440.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|67944377|gb|AAY83824.1| small Rab GTPase RabC9 [Trichomonas vaginalis]
gi|121901199|gb|EAY06217.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 188
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 76/153 (49%), Gaps = 25/153 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
+++++VGD+ VGKTS+V + KG + T+G + +++ +GS +
Sbjct: 1 MKIVLVGDTQVGKTSIVTRLKKGRFAENTTATVGAALQ-EYVVQTETGSVT--------- 50
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G E+++ + Y N + V+D+++ T SL+ W E
Sbjct: 51 ---MQIWDTAGQEKFRTLAPMYYRTANVALIVYDITKSDTFRSLEIWTKE---------- 97
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSG 174
L GP GL + ++GNK D+A + + + G
Sbjct: 98 LQDKGPQGLRI--CIVGNKCDLADERAVQTTQG 128
>gi|380025950|ref|XP_003696725.1| PREDICTED: ras-related protein Rab-43-like [Apis florea]
Length = 219
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 26/156 (16%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GD G GKT +V G+ R TIG +K + ++
Sbjct: 22 KIVLIGDCGTGKTCVVQRFRSGTFIERHGNTIGVDFSMKTVLI-------------DDKK 68
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y NGVI V+D+++R T SLQ W E+ + L
Sbjct: 69 VKLQIWDTAGQERFRTITQSYYRSANGVIVVYDITKRSTFLSLQHWVEEVRRYTSSHVLL 128
Query: 143 ASGGPGGLPVPYVVIGNKADV-AAKEGTRGSSGNLV 177
+++GNK D+ + +E +G + L
Sbjct: 129 ------------ILVGNKCDLESLREVEKGEAEALC 152
>gi|213510702|ref|NP_001134713.1| Ras-related protein Rab-27B [Salmo salar]
gi|209735378|gb|ACI68558.1| Ras-related protein Rab-27B [Salmo salar]
Length = 218
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 73/144 (50%), Gaps = 18/144 (12%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
+++L +GDSGVGKT+ + S+ + T+G K +TY +GS+ G +E+
Sbjct: 11 IKLLSLGDSGVGKTTFLYRYTDNKFNSKFTTTVGIDFREKRVTYLGTGSN-----GTTEK 65
Query: 82 DFFV--ELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFS 139
F V +LWD +G ER++ + + G + + DL+ +++ +++ W ++ +
Sbjct: 66 TFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTNQQSFLNVRNWMSQLQANAYCD 125
Query: 140 APLASGGPGGLPVPYVVIGNKADV 163
+P V++G KAD+
Sbjct: 126 SP-----------DIVLVGTKADL 138
>gi|307192561|gb|EFN75749.1| Ras-related protein Rab-43 [Harpegnathos saltator]
Length = 215
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 25/141 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GD G GKT +V G+ R TIG +K + I G +
Sbjct: 23 KIVLIGDCGTGKTCVVQRFKSGTYVERQGNTIGVDFSMKTVL----------IDGKRVK- 71
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y NGVI V+D+++R T +LQ+W E+ + L
Sbjct: 72 --LQIWDTAGQERFRTITQSYYRSANGVIIVYDITKRSTFLNLQRWMEEVRRYTSSHVLL 129
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
V++GNK D+
Sbjct: 130 ------------VLVGNKCDL 138
>gi|242013254|ref|XP_002427327.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212511676|gb|EEB14589.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 202
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 20/149 (13%)
Query: 18 PTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKG 77
P +V+++GD VGKTS V V+ + T+G +K + + S + +IK
Sbjct: 15 PEKLFKVIIIGDPTVGKTSFVQRYVENTYKRDYKGTVGVDFALKILKW----SDTQTIK- 69
Query: 78 DSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGT 137
++LWDI+G ER+ + Y +G + + DL+ + + + KW ++ + +
Sbjct: 70 -------LQLWDIAGQERFTWMTRVYYKDAHGCVIMFDLTNKNSFVNTLKWKRDVDSKCS 122
Query: 138 FSAPLASGGPGGLPVPYVVIGNKADVAAK 166
P G P+P +++ NK D++ +
Sbjct: 123 L--------PDGRPIPCMLLANKCDLSRR 143
>gi|17536699|ref|NP_496549.1| Protein RAB-7 [Caenorhabditis elegans]
gi|268533066|ref|XP_002631661.1| C. briggsae CBR-RAB-7 protein [Caenorhabditis briggsae]
gi|3880453|emb|CAA91357.1| Protein RAB-7 [Caenorhabditis elegans]
gi|341885407|gb|EGT41342.1| hypothetical protein CAEBREN_32671 [Caenorhabditis brenneri]
Length = 209
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 28/203 (13%)
Query: 13 LNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSS 72
++G ++V+++GDSGVGKTSL+N V R S T+G +T
Sbjct: 1 MSGTRKKALLKVIILGDSGVGKTSLMNQYVN----RRFSNQYKATIGADFLT-------- 48
Query: 73 NSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEI 132
+ D +R +++WD +G ER++ Y + + D++ + SL W E
Sbjct: 49 RDVNID-DRTVTLQIWDTAGQERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEF 107
Query: 133 ATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPS 192
+ P P+V++GNK D+ E R S A+ W + +G +P
Sbjct: 108 LIQASPRDP--------DHFPFVLLGNKVDL---ESQRAVSSK---RAQSWCQTKGNIPY 153
Query: 193 SEELPLTESFPGGGGLIAAAKEA 215
E+ E+ +A A++A
Sbjct: 154 Y-EVSAKEALNVEAAFLAIARDA 175
>gi|332018505|gb|EGI59095.1| Ras-related protein Rab-43 [Acromyrmex echinatior]
Length = 212
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 25/141 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GD G GKT +V G+ R TIG +K + I G +
Sbjct: 15 KIVLIGDCGTGKTCVVQRFRSGTFVERHGNTIGVDFTMKTVL----------IDGKRVK- 63
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y NGVI V+D+++R T SLQ+W E+ +S+
Sbjct: 64 --LQIWDTAGQERFRTITQSYYRSANGVIVVYDITKRSTFLSLQRWVEEVR---RYSSS- 117
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
V V++GNK D+
Sbjct: 118 --------HVLLVLVGNKCDL 130
>gi|302812155|ref|XP_002987765.1| rab family GTPase [Selaginella moellendorffii]
gi|302821214|ref|XP_002992271.1| rab family GTPase [Selaginella moellendorffii]
gi|300139921|gb|EFJ06652.1| rab family GTPase [Selaginella moellendorffii]
gi|300144384|gb|EFJ11068.1| rab family GTPase [Selaginella moellendorffii]
Length = 199
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 25/154 (16%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
Q +++++GD G GK+SLV VKG F TIG + + + ++K
Sbjct: 10 QAKLVLLGDMGAGKSSLVLRFVKGQFFDYQESTIGAAFLTQTLAVNET-----TVK---- 60
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
E+WD +G ERY + Y I V+D++ + +KW E+ G +
Sbjct: 61 ----FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNAESFARAKKWVQELQRQGNANL 116
Query: 141 PLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSG 174
+A + GNKAD+AAK G
Sbjct: 117 VMA------------LAGNKADLAAKRKIETQEG 138
>gi|156841129|ref|XP_001643940.1| hypothetical protein Kpol_1016p24 [Vanderwaltozyma polyspora DSM
70294]
gi|156114570|gb|EDO16082.1| hypothetical protein Kpol_1016p24 [Vanderwaltozyma polyspora DSM
70294]
Length = 211
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 28/172 (16%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
Q +++++GDS VGK+S+V+ VK S TIG + S SIK D E
Sbjct: 3 QFKLVLLGDSSVGKSSIVHRFVKDSFDEFRESTIG------------AAFLSQSIKLD-E 49
Query: 81 RDFFV--ELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTF 138
D + E+WD +G ERYK + Y N + V+D++ + + Q W E+
Sbjct: 50 DDTVIKFEIWDTAGQERYKSLAPMYYRNANAALVVYDITASDSLSKAQSWVEEL------ 103
Query: 139 SAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLL 190
+ ++GNK D+ ++ + S + A+Q+ ++QGLL
Sbjct: 104 -----KNKVADDKLVICLVGNKLDLCQEDSGKRSVE--ISDAKQYADEQGLL 148
>gi|47210875|emb|CAF91812.1| unnamed protein product [Tetraodon nigroviridis]
Length = 90
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 12/93 (12%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y G+ E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVQDY-KEGTP-------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQING 109
+ +++ELWD+ G K R++ Y+ +NG
Sbjct: 58 KTYYIELWDVGGSVGSASSVKSTRAVFYNSVNG 90
>gi|296005155|ref|XP_002808912.1| PfRab7, GTPase [Plasmodium falciparum 3D7]
gi|13509187|emb|CAB92946.2| putative Rab7 GTPase [Plasmodium falciparum 3D7]
gi|225631795|emb|CAX64193.1| PfRab7, GTPase [Plasmodium falciparum 3D7]
Length = 206
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 27/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K D+E+
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKETIV------------DNEQ 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V DL+ +T SL+ W E F
Sbjct: 57 -ITMQIWDTAGQERFQSLGVAFYRGADCCVLVFDLTNYKTYESLESWKDE------FLIQ 109
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
+ P P+V+IGNK D K + QW + +P E
Sbjct: 110 ASPKDPENF--PFVIIGNKVDETNKRKVQSLK------VLQWCKSNNNIPYFE 154
>gi|74833685|emb|CAI39322.1| rab_C05 [Paramecium tetraurelia]
Length = 219
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 24/147 (16%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
Q++V+++GD+GVGKT ++N V+G TIG K +T G
Sbjct: 13 QLQVVLLGDAGVGKTYILNQYVRGQQPRNNLPTIGIEFATKTVTLQDGGKIQ-------- 64
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
V++WD +G ERY+ + + G + V+D+++ +T +L +W E+ T+
Sbjct: 65 ----VQIWDTAGQERYRAITTNHFRGAGGALLVYDITKEKTFENLTRWMEELKTA----- 115
Query: 141 PLASGGPGGLPVPYVVIGNKADVAAKE 167
V ++GNK D+ ++
Sbjct: 116 -------ANKDVVMYLVGNKTDLVERQ 135
>gi|47207446|emb|CAF91844.1| unnamed protein product [Tetraodon nigroviridis]
Length = 189
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 71/144 (49%), Gaps = 16/144 (11%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
+++L +GDSGVGKT+ ++ + + T+G K + Y +G + G +ER
Sbjct: 10 IKLLALGDSGVGKTTFLHRYTDNKFNRKFTTTVGIDFREKRVMYTGTG-----VDGMTER 64
Query: 82 DF--FVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFS 139
+F ++LWD +G ER++ + + G + + DL+ R++ +++ W + G
Sbjct: 65 NFRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTDRQSFLNVRNW----MSMGQLQ 120
Query: 140 APLASGGPGGLPVPYVVIGNKADV 163
A P V++G KAD+
Sbjct: 121 ANAYCDSP-----DIVLVGTKADL 139
>gi|407034580|gb|EKE37287.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 197
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 89/220 (40%), Gaps = 43/220 (19%)
Query: 24 VLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERDF 83
++++GDS VGK+SL+N + S ++ TIG K I + G+S
Sbjct: 1 MILIGDSAVGKSSLMNQFINKSFTAQYKATIGADFLTKEI----------DVDGESVA-- 48
Query: 84 FVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPLA 143
+++WD +GHE++ Y + V D++ ++ SL W + L+
Sbjct: 49 -LQVWDTAGHEKFMSFGQAFYRGSDCCFLVFDVTNEQSFQSLDTWKNDF---------LS 98
Query: 144 SGGP-GGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTESF 202
P P+VV+GNK D A + + + A+ W E G +P E
Sbjct: 99 GANPTNATNFPFVVMGNKVDEDAAKRVVSN-----EQAKDWCENNGDIPYYE-------- 145
Query: 203 PGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAP 242
+AK +EA + R +++ D P P
Sbjct: 146 -------TSAKSGLNVEEAFLTVARKVVKTMKKEDNHPVP 178
>gi|365985618|ref|XP_003669641.1| hypothetical protein NDAI_0D00840 [Naumovozyma dairenensis CBS 421]
gi|343768410|emb|CCD24398.1| hypothetical protein NDAI_0D00840 [Naumovozyma dairenensis CBS 421]
Length = 208
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL++ V + TIG K +T D ++
Sbjct: 9 LKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTI------------DDDK 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ ++ +++ W E S P
Sbjct: 57 IATMQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNAKSFENIKSWRDEFLIHANISTP 116
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
P+V++GNK DV
Sbjct: 117 --------ETFPFVILGNKIDV 130
>gi|366990901|ref|XP_003675218.1| hypothetical protein NCAS_0B07630 [Naumovozyma castellii CBS 4309]
gi|342301082|emb|CCC68847.1| hypothetical protein NCAS_0B07630 [Naumovozyma castellii CBS 4309]
Length = 216
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 24/172 (13%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
Q +++++GDS VGK+S+V+ VK S TIG + I + + E
Sbjct: 3 QFKLVLLGDSSVGKSSIVHRFVKDSFDELRESTIGAAFLSQTIKIKAE---------EQE 53
Query: 81 RDFFV--ELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTF 138
D + E+WD +G ERYK + Y N + V+DL+Q+ + + W E+
Sbjct: 54 EDVVIKFEIWDTAGQERYKSLAPMYYRNANAALVVYDLTQKDSLVKARSWVEEL------ 107
Query: 139 SAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLL 190
G + ++GNK D+ EG A+ + E+Q LL
Sbjct: 108 -----KNKVGDEDLVIFLVGNKLDLC--EGEEDLRAVDTSEAKAYAEEQNLL 152
>gi|130502148|ref|NP_001076317.1| uncharacterized protein LOC565931 [Danio rerio]
gi|126631826|gb|AAI33897.1| Zgc:162171 protein [Danio rerio]
Length = 224
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 20/141 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++VLV+GD GVGKTS++ V TIG +K + + D
Sbjct: 7 LKVLVIGDLGVGKTSIIKRYVHQIFSQHYRATIGVDFALKVLNW------------DHRT 54
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWDI+G ERY + + Y + G + V D+++ T ++ KW ++ +
Sbjct: 55 VVRLQLWDIAGQERYGNMTRVYYREAVGALVVFDMTRASTFQAVLKWKKDL------DSK 108
Query: 142 LASGGPGGLPVPYVVIGNKAD 162
+A G G P+P V++ NK D
Sbjct: 109 VALG--NGRPLPAVLLANKCD 127
>gi|67482255|ref|XP_656477.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978614|dbj|BAD34974.1| EhRab7G protein [Entamoeba histolytica]
gi|56473678|gb|EAL51093.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449708325|gb|EMD47807.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 190
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 31/165 (18%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
++++++G+SGVGKTSL+ V TIGC K +
Sbjct: 1 MLKLILIGESGVGKTSLIQRYVMNKFEPTYKTTIGCDFLAKTVYV-------------EN 47
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
+++ +++WD +GHE++ S Y +G I V D++ + T++ W E +S
Sbjct: 48 KEYNLQIWDTAGHEKFSSMVSSFYRGSDGAIIVFDVTNTSSFTAIDTWISE------YSR 101
Query: 141 PLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVE 185
L G VP ++ GNK D + + ++ARQW E
Sbjct: 102 AL-----NGKDVPIIICGNKVDCQPRLVS-------TESARQWCE 134
>gi|328771241|gb|EGF81281.1| hypothetical protein BATDEDRAFT_87536 [Batrachochytrium
dendrobatidis JAM81]
Length = 209
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 26/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + ER
Sbjct: 10 LKVIILGDSGVGKTSLMNQYVNSKFSTQYKATIGADFLTKEVMV-------------EER 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + V+D++ ++ +L W E P
Sbjct: 57 SVTMQIWDTAGQERFQSLGVAFYRGADCCALVYDVNNVKSFDNLDSWRDEFLLQANPRDP 116
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VVIGNK DV ++ R + A W +++G +P E
Sbjct: 117 --------ENFPFVVIGNKVDV--EDSKRQVTQK---RAMTWCQQKGNIPYFE 156
>gi|324518162|gb|ADY47020.1| Ras-related protein Rab-33 [Ascaris suum]
Length = 312
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 27/151 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+V+++GD+GVGKT L G ++ TIG + + I G+ R
Sbjct: 107 KVIILGDAGVGKTCLSFRFCNGRFPAQTEATIGVDFRERSVV----------IDGELIR- 155
Query: 83 FFVELWDISGHERYKDCRSIL---YSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFS 139
V+LWD +G ERY+ +SI+ Y +N V+FV+D+S + SL W E + +
Sbjct: 156 --VQLWDTAGQERYR--QSIVSHYYRNVNAVVFVYDVSNPASFRSLSTWISECRSHAVSA 211
Query: 140 APLASGGPGGLPVPYVVIGNKADVAAKEGTR 170
+ P+++IGNK D++ +E +
Sbjct: 212 SK---------DTPHILIGNKCDLSPEERVK 233
>gi|307211001|gb|EFN87282.1| Ras-related protein Rab-27A [Harpegnathos saltator]
Length = 210
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 11/150 (7%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++ L +GDSGVGKTS ++ + G+ +R T+G K + Y ++ + +
Sbjct: 9 IKFLALGDSGVGKTSFLHQYIDGTFNARFISTVGIDFKEKRMIYRTANGRNRRVH----- 63
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ + Y G + + DL+ + ++ W + T P
Sbjct: 64 ---LQLWDTAGQERFRSLTTAFYRDSMGFLLIFDLTNELSFLEVRNWLEHLRTHAYCDDP 120
Query: 142 --LASGGPGGLPVPYVVIGNKA-DVAAKEG 168
+ G L VV +KA D+A K G
Sbjct: 121 DIILCGNKSDLEDKRVVSKDKALDLAKKHG 150
>gi|168019492|ref|XP_001762278.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162686356|gb|EDQ72745.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 211
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 73/155 (47%), Gaps = 26/155 (16%)
Query: 14 NGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSN 73
+GG +VL++GDSGVGK+SL+ L +F S TIG VK +T G
Sbjct: 4 SGGEFDHLFKVLLIGDSGVGKSSLL-LRFTADTFDDLSPTIGVDFKVKMMTLGG------ 56
Query: 74 SIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEI 132
+ + +WD +G ER++ S Y G+I V+D+S+R T T L W E+
Sbjct: 57 -------KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVSRRATFTDLSDIWLKEV 109
Query: 133 ATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKE 167
T P + ++IGNK D+ +E
Sbjct: 110 DRFST--------KPDCIK---MLIGNKVDLEERE 133
>gi|302694835|ref|XP_003037096.1| hypothetical protein SCHCODRAFT_72805 [Schizophyllum commune H4-8]
gi|300110793|gb|EFJ02194.1| hypothetical protein SCHCODRAFT_72805 [Schizophyllum commune H4-8]
Length = 203
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 6 LKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMV-------------DDR 52
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 53 LVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDP 112
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+GNK DV +E R + A W + +G +P E
Sbjct: 113 --------ENFPFVVLGNKIDV--EENKRQVTQK---RAMTWCQSKGNIPYFE 152
>gi|159107420|ref|XP_001703990.1| RabB [Giardia lamblia ATCC 50803]
gi|19387544|gb|AAL87242.1|AF481767_1 RabB [Giardia intestinalis]
gi|42475928|tpg|DAA01322.1| TPA_exp: RBJ protein [Giardia intestinalis]
gi|157432036|gb|EDO76316.1| RabB [Giardia lamblia ATCC 50803]
Length = 185
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 17 PPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIK 76
P +++V G S VGK+ L+ +G + TIG GV+ + ++
Sbjct: 10 PLVVRLKVTTAGMSQVGKSCLIKYYCEGRFVKKYLPTIGVDYGVRAL----------DLE 59
Query: 77 GDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
G + R + +D+SG + Y+D R YS G++ + D+S R + T+L+K+ E S
Sbjct: 60 GCTVR---INFFDLSGLDEYQDIRKEFYSDTQGLLLIFDMSNRDSFTALEKYYGEFIKSS 116
Query: 137 TFSAPLASGGPGGLPVPYVVIGNKADVAA 165
T G G V VIG KAD+ A
Sbjct: 117 T------GAGAGAGSVSIYVIGTKADLPA 139
>gi|329664240|ref|NP_001192879.1| ras-related protein Rab-32 [Bos taurus]
gi|296483942|tpg|DAA26057.1| TPA: RAB32, member RAS oncogene family-like [Bos taurus]
Length = 225
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS
Sbjct: 28 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------DSRTL 75
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++ +
Sbjct: 76 VRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDISRGSTFDAVLKWKSDLDSKVHL---- 131
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G P+P V++ NK D
Sbjct: 132 ----PNGSPIPAVLLANKCD 147
>gi|225463105|ref|XP_002264356.1| PREDICTED: ras-related protein Rab7 isoform 1 [Vitis vinifera]
gi|297739360|emb|CBI29350.3| unnamed protein product [Vitis vinifera]
Length = 205
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 86/196 (43%), Gaps = 30/196 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + SQ T+G +T ++ D +R
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVH----KKFSQQYKATIGADFVT--------KELQID-DR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ R+ +L W E S P
Sbjct: 56 LVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDTLDNWHEEFLKQANPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSEELPLT 199
P++++GNK D+ G + +V A W +G +P E
Sbjct: 116 --------KTFPFILLGNKIDI------DGGNSRVVSKKKAEDWCASKGNIPYFET-SAK 160
Query: 200 ESFPGGGGLIAAAKEA 215
E + + AK A
Sbjct: 161 EDYNVDAAFLCIAKTA 176
>gi|390604173|gb|EIN13564.1| hypothetical protein PUNSTDRAFT_48509 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 203
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 6 LKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMV-------------DDR 52
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 53 LVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFLIQASPHDP 112
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+GNK DV +E R + A W + +G +P E
Sbjct: 113 --------ENFPFVVLGNKIDV--EENKRQVTQK---RAMTWCQSKGNIPYFE 152
>gi|255572331|ref|XP_002527104.1| protein with unknown function [Ricinus communis]
gi|223533527|gb|EEF35267.1| protein with unknown function [Ricinus communis]
Length = 205
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + SQ T+G +T ++ D +R
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVH----KKFSQQYKATIGADFVT--------KELQID-DR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ R+ +L W E
Sbjct: 56 LVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDALDNWHEEFLKQ------ 109
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
+ P P++++GNK D+ G + +V A++W +G +P E
Sbjct: 110 --ANPPDPKTFPFILLGNKIDI------DGGNSRVVSEKKAKEWCASKGNIPYFE 156
>gi|339251320|ref|XP_003373143.1| conserved hypothetical protein [Trichinella spiralis]
gi|316969013|gb|EFV53183.1| conserved hypothetical protein [Trichinella spiralis]
Length = 418
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 37 LVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERDFFVELWDISGHERY 96
L+ V G + P T+GC+V V Y S ++ FF+ELWDISG Y
Sbjct: 203 LLRFHVAGCPTAEPPATLGCSVDVTLYQYAPSIE---------KQLFFIELWDISGASCY 253
Query: 97 KDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIAT 134
+D R + Y ++G+IFV+ L ++ W VE+ T
Sbjct: 254 EDIRKMFYCNVDGIIFVYSLVDGKSSERAVNWIVEVLT 291
>gi|449302434|gb|EMC98443.1| hypothetical protein BAUCODRAFT_23209 [Baudoinia compniacensis UAMH
10762]
Length = 205
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 21/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V + TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E ++P
Sbjct: 56 LVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFDTLDSWRDEFLIQ---ASP 112
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
+ P G P+VV+GNK DV
Sbjct: 113 M---DPEGF--PFVVLGNKVDV 129
>gi|238480271|ref|NP_001154217.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
gi|332657385|gb|AEE82785.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
Length = 217
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 26/179 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + TIG K + G E+
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIG-------------EK 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATS----GT 137
+++WD +G ER++ + Y + V+D++ R+ +L+ W E G
Sbjct: 56 LVTLQIWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQAWNIGM 115
Query: 138 FSAPLASGGPGG-LPVPYVVIGNKADVAAKEGTRGSSGNLVD-AARQWVEKQGLLPSSE 194
++ +A P P++V+GNK DV GSS + D A W G +P E
Sbjct: 116 WT--IAEASPSDPKTFPFIVLGNKIDVDG-----GSSRVVSDKKAADWCASNGNIPYFE 167
>gi|417408732|gb|JAA50904.1| Putative gtp-binding protein-like ras superfamily, partial
[Desmodus rotundus]
Length = 215
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS
Sbjct: 17 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------DSRTL 64
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++ + L
Sbjct: 65 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRGSTFEAVLKWKNDLDS----KVHL 120
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
SGG P+P V++ NK D
Sbjct: 121 PSGG----PIPAVLLANKCD 136
>gi|363754611|ref|XP_003647521.1| hypothetical protein Ecym_6328 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891158|gb|AET40704.1| hypothetical protein Ecym_6328 [Eremothecium cymbalariae
DBVPG#7215]
Length = 205
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 31/174 (17%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
Q +++++GDS VGK+S+V+ VK S TIG + S +IK
Sbjct: 3 QFKLVLLGDSSVGKSSIVHRFVKDSFDEFRESTIG------------AAFLSRTIKLAEY 50
Query: 81 RDFFV--ELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTF 138
D + E+WD +G ERYK + Y N + V+D++Q + Q W E+ +
Sbjct: 51 DDTMIKFEIWDTAGQERYKSLAPMYYRNANAALVVYDVTQEDSLAKAQSWVNELKSK--- 107
Query: 139 SAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDA--ARQWVEKQGLL 190
G + ++GNK D+A ++ S ++D A+ + E+ GL+
Sbjct: 108 --------VGDDDLVICLVGNKVDLAEED----SKSKVIDEDDAKDYAEQHGLI 149
>gi|407853753|gb|EKG06607.1| small GTP-binding protein Rab11, putative,Rab11 GTPase, putative
[Trypanosoma cruzi]
Length = 243
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 18/141 (12%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VL++G+ G GKT L+ V G + TIG +K + + ++ R+
Sbjct: 12 KVLIIGEGGTGKTCLIRRYVHGIFLATNKATIGVDFALKDVVHAAT-----------NRN 60
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ERY + Y G I V D+++ T KW ++ S F
Sbjct: 61 ITLQLWDIAGQERYGQMTRVYYQAAAGAIIVADITRPETLDLAVKWKQDV-DSKVFL--- 116
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
G G +P +++ NK D+
Sbjct: 117 ---GSSGKSIPCILLINKVDL 134
>gi|393218537|gb|EJD04025.1| hypothetical protein FOMMEDRAFT_19344 [Fomitiporia mediterranea
MF3/22]
Length = 203
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 6 LKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMV-------------DDR 52
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 53 LVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFLIQASPHDP 112
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+GNK DV +E R + A W + +G +P E
Sbjct: 113 --------ENFPFVVLGNKIDV--EENKRQVTQK---RAMTWCQSKGNIPYFE 152
>gi|388517279|gb|AFK46701.1| unknown [Lotus japonicus]
Length = 209
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 40/168 (23%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGK+SL+ L F S TIG VK++ G +
Sbjct: 15 KLLMIGDSGVGKSSLL-LSFTSDEFQDMSPTIGVDFKVKYVAIGG-------------KK 60
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEIATSGTFSAP 141
+ +WD +G ER++ S Y G+I V+D+++R T T+L + WA EI T
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEIWAKEIDLYSTNQDC 120
Query: 142 LASGGPGGLPVPYVVIGNKAD------VAAKEGTRGSSGNLVDAARQW 183
+ +++GNK D V+ KEG +D AR++
Sbjct: 121 IK-----------MLVGNKVDKESDRVVSKKEG--------IDFAREY 149
>gi|307170291|gb|EFN62646.1| Ras-related protein Rab-43 [Camponotus floridanus]
Length = 223
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 25/141 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GD G GKT +V G+ R TIG +K ++ D +R
Sbjct: 25 KIVLIGDCGTGKTCVVQRFRSGTFVERHGNTIGVDFTMK------------TVLIDGKR- 71
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y NGVI V+D+++R T SLQ+W E+ + L
Sbjct: 72 IKLQIWDTAGQERFRTITQSYYRCANGVIVVYDITKRSTFLSLQRWVEEVRRYSSSHVLL 131
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
V++GNK D+
Sbjct: 132 ------------VLVGNKCDL 140
>gi|392597178|gb|EIW86500.1| hypothetical protein CONPUDRAFT_114884 [Coniophora puteana
RWD-64-598 SS2]
Length = 203
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 6 LKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMV-------------DDR 52
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 53 LVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDP 112
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+GNK DV +E R + A W + +G +P E
Sbjct: 113 --------ENFPFVVLGNKIDV--EENKRQVTQK---RAMTWCQSKGNIPYFE 152
>gi|449686127|ref|XP_004211079.1| PREDICTED: uncharacterized protein LOC101235661 [Hydra
magnipapillata]
Length = 218
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
RD F+E WD+ G K R I YS +NG+I VHDLS R++ T+LQ W E+ +G
Sbjct: 23 RDVFLEFWDVGGSSGNKHSRGIFYSNVNGLILVHDLSNRKSFTNLQFWLKEVLNAG 78
>gi|308502456|ref|XP_003113412.1| CRE-RAB-7 protein [Caenorhabditis remanei]
gi|308263371|gb|EFP07324.1| CRE-RAB-7 protein [Caenorhabditis remanei]
Length = 245
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 28/203 (13%)
Query: 13 LNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSS 72
++G ++V+++GDSGVGKTSL+N V R S T+G +T
Sbjct: 37 MSGTRKKALLKVIILGDSGVGKTSLMNQYVN----RRFSNQYKATIGADFLT-------- 84
Query: 73 NSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEI 132
+ D +R +++WD +G ER++ Y + + D++ + SL W E
Sbjct: 85 RDVNID-DRTVTLQIWDTAGQERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEF 143
Query: 133 ATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPS 192
+ P P+V++GNK D+ E R S A+ W + +G +P
Sbjct: 144 LIQASPRDP--------DHFPFVLLGNKVDL---ESQRAVSSK---RAQSWCQTKGNIP- 188
Query: 193 SEELPLTESFPGGGGLIAAAKEA 215
E+ E+ +A A++A
Sbjct: 189 YYEVSAKEALNVEAAFLAIARDA 211
>gi|242077810|ref|XP_002448841.1| hypothetical protein SORBIDRAFT_06g034200 [Sorghum bicolor]
gi|241940024|gb|EES13169.1| hypothetical protein SORBIDRAFT_06g034200 [Sorghum bicolor]
Length = 215
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 28/162 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGK+SL+ L SF S TIG VK ++ G +
Sbjct: 21 KLLLIGDSGVGKSSLL-LRFTADSFEDLSPTIGVDFKVKMVSIGG-------------KK 66
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEIATSGTFSAP 141
+ +WD +G ER++ S Y G+I V+D+++R T T+L WA EI T
Sbjct: 67 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDC 126
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQW 183
+ +++GNK D ++ G ++ AR++
Sbjct: 127 IK-----------MLVGNKVDKESERCVTKKEG--IEFAREY 155
>gi|156397996|ref|XP_001637975.1| predicted protein [Nematostella vectensis]
gi|156225092|gb|EDO45912.1| predicted protein [Nematostella vectensis]
Length = 191
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 27/158 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD GVGKTSL+ KG S T+G VG + + I GD +
Sbjct: 13 KVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVL----------DIHGDRVK- 61
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++ WD +G E+++ Y + VI V D++ R T S+ +W + + +
Sbjct: 62 --LQCWDTAGQEKFRGITQSYYRNADAVILVFDITNRGTFASIPQWLMNVQKYTNKN--- 116
Query: 143 ASGGPGGLPVPYVVIGNKADV--AAKEGTRGSSGNLVD 178
+ V++GNK D+ A+++ S+ NL +
Sbjct: 117 ---------ILKVLVGNKTDLKGASRKVNTRSAANLAE 145
>gi|74025730|ref|XP_829431.1| small GTPase [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|1195465|gb|AAC46990.1| ras-related protein RAB-4 [Trypanosoma brucei rhodesiense]
gi|70834817|gb|EAN80319.1| small GTPase, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|261335424|emb|CBH18418.1| ras-related rab-4, putative [Trypanosoma brucei gambiense DAL972]
Length = 198
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 25/155 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++++VVGDSG GK+SL++ V+ + +QTIG G K I S R
Sbjct: 9 MKLIVVGDSGTGKSSLLHRFVEDTFSEERAQTIGVEFGSKIIEL-------------SGR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ERYK Y G + V+D+++R + S+ +W ++
Sbjct: 56 RIKLQIWDTAGQERYKSVTRSYYRGAVGCLIVYDITERTSYESVPQWLNDV-------RQ 108
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNL 176
LA GP V ++IGNK+D++ + + +L
Sbjct: 109 LA--GP---DVVVMLIGNKSDMSKNRAVQHNEASL 138
>gi|388511052|gb|AFK43592.1| unknown [Lotus japonicus]
Length = 205
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 30/196 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V R SQ T+G +T ++ D +R
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVH----KRFSQQYKATIGADFVT--------KELQID-DR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ R+ +L W E
Sbjct: 56 LVTLQIWDTAGQERFQSLGVSFYRGADCCVLVYDVNVMRSFDTLDTWHEEFLKQ------ 109
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSEELPLT 199
+ P P++++GNK D+ G + +V A W +G +P E
Sbjct: 110 --ANPPDTRTFPFILLGNKIDI------DGGNSRVVSEKKANDWCVSKGNIPYFET-SAK 160
Query: 200 ESFPGGGGLIAAAKEA 215
E + ++ AK A
Sbjct: 161 EDYNVDAAFLSIAKTA 176
>gi|378726191|gb|EHY52650.1| Ras-like protein Rab7 [Exophiala dermatitidis NIH/UT8656]
Length = 205
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 21/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V + TIG K +T +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSTSYKATIGADFLTKEVTV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 56 IVTLQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPRDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
+ P+VVIGNK D+
Sbjct: 116 ES--------FPFVVIGNKIDL 129
>gi|71994817|ref|NP_001024837.1| Protein GLO-1 [Caenorhabditis elegans]
gi|63108011|emb|CAE17932.2| Protein GLO-1 [Caenorhabditis elegans]
gi|66170981|gb|AAY42967.1| Rab GTPase GLO-1 [Caenorhabditis elegans]
Length = 212
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 64/146 (43%), Gaps = 20/146 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+GD GVGKTS++ V S TIG +K + D
Sbjct: 13 KVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPV------------DENTV 60
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WDISG +RY + Y + I V D ++ RT +W ++ T +
Sbjct: 61 VHLQIWDISGQDRYGVMTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDLDQKVTLA--- 117
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEG 168
G PVP +++ NK D+ K G
Sbjct: 118 -----DGSPVPAILLANKCDIDNKLG 138
>gi|355748839|gb|EHH53322.1| hypothetical protein EGM_13940, partial [Macaca fascicularis]
Length = 198
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 64/139 (46%), Gaps = 20/139 (14%)
Query: 24 VLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERDF 83
VLV+G+ GVGKTS++ V TIG +K + + DS
Sbjct: 1 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------DSRTLV 48
Query: 84 FVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPLA 143
++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++ +
Sbjct: 49 RLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHL----- 103
Query: 144 SGGPGGLPVPYVVIGNKAD 162
P G P+P V++ NK D
Sbjct: 104 ---PNGSPIPAVLLANKCD 119
>gi|365983882|ref|XP_003668774.1| hypothetical protein NDAI_0B04980 [Naumovozyma dairenensis CBS 421]
gi|343767541|emb|CCD23531.1| hypothetical protein NDAI_0B04980 [Naumovozyma dairenensis CBS 421]
Length = 227
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 18/151 (11%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
Q +++++GDS VGK+S+V+ VK S TIG + I + + +
Sbjct: 3 QFKLVLLGDSSVGKSSIVHRFVKDSFDELRESTIGAAFLAQTIKIKDTETQEDI------ 56
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
D E+WD +G ERYK + Y N + V+DL+Q+ + + W E+ +
Sbjct: 57 -DIKFEIWDTAGQERYKSLAPMYYRNANAALVVYDLTQKNSLSKAMSWVDELKSK----- 110
Query: 141 PLASGGPGGLPVPYVVIGNKADVAAKEGTRG 171
G + ++GNK D+ RG
Sbjct: 111 ------VGDEDLVIYLVGNKLDLCDNVENRG 135
>gi|449269313|gb|EMC80103.1| Ras-related protein Rab-27A [Columba livia]
Length = 221
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 29/203 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++ L +GDSGVGKTSL+ G S+ T+G K + Y +G + + G +R
Sbjct: 10 IKFLALGDSGVGKTSLLYQYTDGKFNSKFITTVGIDFREKRVVYRPNG--PDGVGGRGQR 67
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ + + G + + DL+ ++ +++ W ++ P
Sbjct: 68 -IHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENP 126
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
V+ GNK+D+ + + D A++ EK G +P E+
Sbjct: 127 -----------DIVLCGNKSDLEDQRMVKE------DEAKELAEKYG-------IPYFET 162
Query: 202 FPGGGGLIAAAKEARYDKEAVMK 224
G ++ A E D +MK
Sbjct: 163 SAANGNNVSKAIETLLD--LIMK 183
>gi|393247992|gb|EJD55499.1| hypothetical protein AURDEDRAFT_50434 [Auricularia delicata
TFB-10046 SS5]
Length = 203
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 6 LKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMV-------------DDR 52
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E F
Sbjct: 53 LVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDE------FLIQ 106
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
+ P P+VV+GNK DV +E R + A W + +G +P E
Sbjct: 107 ASPHDPDNF--PFVVLGNKIDV--EESKRQVTQK---RAMTWCQSKGNIPYFE 152
>gi|357619225|gb|EHJ71885.1| Rab7 [Danaus plexippus]
Length = 208
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 28/173 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V D++ T SL+ W E F
Sbjct: 56 IVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDE------FLIQ 109
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
+ P P+V++GNK D+ R S A+QW + + +P E
Sbjct: 110 ASPRDPDNF--PFVILGNKVDLE----NRAVSAK---RAQQWCQSKNDIPYFE 153
>gi|67470476|ref|XP_651202.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978610|dbj|BAD34972.1| EhRab7E protein [Entamoeba histolytica]
gi|56467907|gb|EAL45816.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449703795|gb|EMD44174.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 207
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 76/173 (43%), Gaps = 26/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++++++GDSGVGK+SL+N ++ + ++ TIG K +T + ++
Sbjct: 11 LKMILIGDSGVGKSSLMNQFIEKTFTAQYKATIGADFLTKEVTINGTATT---------- 60
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +GHE++ + Y + + V D++ + SL W E + P
Sbjct: 61 ---LQIWDTAGHEKFMSFGAAFYRGSDCCLLVLDVTNEASFKSLDTWKKEFLNGANVTNP 117
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+ NK D + V +QW E G +P E
Sbjct: 118 --------NDFPFVVLVNKMDEDPSKHVVS-----VSDVKQWCENNGNIPLYE 157
>gi|431838500|gb|ELK00432.1| Ras-related protein Rab-38 [Pteropus alecto]
Length = 211
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + S TIG +K + + D E
Sbjct: 11 KLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHW------------DPETV 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + +
Sbjct: 59 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKNDLDSKLSL---- 114
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G PV V++ NK D
Sbjct: 115 ----PNGKPVSVVLLANKCD 130
>gi|41152205|ref|NP_958486.1| ras-related protein Rab-13 [Danio rerio]
gi|31419201|gb|AAH53195.1| RAB13, member RAS oncogene family [Danio rerio]
Length = 200
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 25/152 (16%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGKT L+ + + S TIG VK I ++G +
Sbjct: 10 KLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTI----------EVEGKKVK- 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER+K + Y G+I V+D++ ++ ++Q W I +
Sbjct: 59 --LQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSYENIQNWMKSIKEN------- 109
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSG 174
AS G V +++GNK D+ AK +G
Sbjct: 110 ASAG-----VSRMLLGNKCDIEAKRKVSKETG 136
>gi|116781281|gb|ABK22035.1| unknown [Picea sitchensis]
gi|116793125|gb|ABK26622.1| unknown [Picea sitchensis]
Length = 206
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 30/186 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQV-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 56 LVTMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVIKSFDNLDNWRQEFLIQANPTDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLP-----SSEEL 196
P+VV+GNK DV S A+ W +G +P + E++
Sbjct: 116 --------ENFPFVVLGNKTDVDGGHSRVVSEKK----AKMWCAAKGNIPYFETSAKEDM 163
Query: 197 PLTESF 202
+ E+F
Sbjct: 164 NVEEAF 169
>gi|1370174|emb|CAA98164.1| RAB1Y [Lotus japonicus]
Length = 207
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 40/168 (23%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGK+SL+ L F S TIG VK++ G +
Sbjct: 13 KLLMIGDSGVGKSSLL-LSFTSDEFQDMSPTIGVDFKVKYVAIGG-------------KK 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEIATSGTFSAP 141
+ +WD +G ER++ S Y G+I V+D+++R T T+L + WA EI T
Sbjct: 59 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEIWAKEIDLYSTNQDC 118
Query: 142 LASGGPGGLPVPYVVIGNKAD------VAAKEGTRGSSGNLVDAARQW 183
+ +++GNK D V+ KEG +D AR++
Sbjct: 119 IK-----------MLVGNKVDKESDRVVSKKEG--------IDFAREY 147
>gi|123454545|ref|XP_001315025.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|67944369|gb|AAY83820.1| small Rab GTPase RabC5 [Trichomonas vaginalis]
gi|121897689|gb|EAY02802.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 190
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 25/142 (17%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V++VG++ VGK+ +++ V+GS + TIG K IT SE
Sbjct: 4 LKVVIVGETKVGKSCILSRFVQGSFDASMPATIGAAFLTKVIT-------------TSEG 50
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G E+++ + Y N + V+D++ + + SL+ W+ EIA AP
Sbjct: 51 PMRLQLWDTAGQEKFRSLAPMYYRSANVAVLVYDVTSKSSLESLEDWSAEIAD----KAP 106
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
PG + VVIGNK D+
Sbjct: 107 -----PG---IKLVVIGNKIDM 120
>gi|183233923|ref|XP_652334.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|169801344|gb|EAL46948.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
Length = 197
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 89/220 (40%), Gaps = 43/220 (19%)
Query: 24 VLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERDF 83
++++GDS VGK+SL+N + S ++ TIG K I + G+S
Sbjct: 1 MILIGDSAVGKSSLMNQFINKSFTAQYKATIGADFLTKEI----------DVDGESVA-- 48
Query: 84 FVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPLA 143
+++WD +GHE++ Y + V D++ ++ SL W + L+
Sbjct: 49 -LQVWDTAGHEKFMSFGQAFYRGSDCCFLVFDVTNEQSFQSLDTWKNDF---------LS 98
Query: 144 SGGP-GGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTESF 202
P P+VV+GNK D A + + + A+ W E G +P E
Sbjct: 99 GANPTNATNFPFVVMGNKVDEDAAKRVVTN-----EQAKDWCENNGDIPYYE-------- 145
Query: 203 PGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAP 242
+AK +EA + R +++ D P P
Sbjct: 146 -------TSAKSGLNVEEAFLTVARKVVKTMKKEDNHPVP 178
>gi|256083955|ref|XP_002578200.1| rab-related GTP-binding protein [Schistosoma mansoni]
gi|353232719|emb|CCD80074.1| rab-related GTP-binding protein [Schistosoma mansoni]
Length = 224
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 23/142 (16%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
Q RV+++GDS VGK+SL+ V+G+ F+ S T+GV S +++ E
Sbjct: 8 QFRVIIIGDSMVGKSSLMKSFVEGN-FTPVSDP---TIGVDFF--------SRTVRIQEE 55
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
++LWD +G E+++ S Y GV+ V DL+ R T + +W E S SA
Sbjct: 56 VFVKLQLWDTAGQEKFRTITSSYYRNCVGVVVVFDLTDRETFDHVAEWYEEARASIKCSA 115
Query: 141 PLASGGPGGLPVPYVVIGNKAD 162
P+ ++++G+KAD
Sbjct: 116 PV-----------FIIVGHKAD 126
>gi|198426530|ref|XP_002131139.1| PREDICTED: similar to MGC80943 protein [Ciona intestinalis]
Length = 232
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 77/163 (47%), Gaps = 16/163 (9%)
Query: 1 MFWKERERENKELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGV 60
M ++ +E+++L+ ++ L +GDSGVGKTS + GS S+ T+G
Sbjct: 1 MTLSDKPKESEQLHNTEYDYLIKFLALGDSGVGKTSFLFQYTDGSFESKFVTTVGIDFRE 60
Query: 61 KHITYGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRR 120
K ++Y +G S G ++R ++LWD +G ER++ + + G + DL+ +
Sbjct: 61 KRVSYRPAGVDS----GRAQR-VHLQLWDTAGQERFRSLTTAFFRDAMGFLLFFDLTSEQ 115
Query: 121 TKTSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADV 163
+ +++ W ++ +P ++ GNK D+
Sbjct: 116 SFLNIRNWLDQLKQHSYCESP-----------DIILCGNKCDL 147
>gi|170590099|ref|XP_001899810.1| Ras family protein [Brugia malayi]
gi|158592729|gb|EDP31326.1| Ras family protein [Brugia malayi]
Length = 230
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 28/168 (16%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GD G GK+S IV+ + + +Q TVGV T ++ E
Sbjct: 24 KILIIGDVGTGKSS----IVQRYAHNLFTQHYKATVGVDFAT--------RTLIWSDEAT 71
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDISG +R+ + + Y +G I V D +++ T +W ++ + T +
Sbjct: 72 LRLQLWDISGQDRFSNMTRVYYKDAHGAIVVFDCTRQNTYDGALRWKSDLDSKITLAT-- 129
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLL 190
G P+P +++ NKAD+ K +SG L ++ EK G L
Sbjct: 130 ------GKPLPCILVANKADLDNKI----TSGKL----EEYREKGGFL 163
>gi|348510295|ref|XP_003442681.1| PREDICTED: ras-related protein Rab-7a-like [Oreochromis niloticus]
Length = 204
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 30/171 (17%)
Query: 16 GPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSI 75
GP T ++V+++G+SGVGK+S++N V R + TVG + S + +I
Sbjct: 6 GPIT--LKVILIGNSGVGKSSVMNRYVN----HRFTNMYRATVGTDFL------SKTINI 53
Query: 76 KGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATS 135
GD+ +++WD +G ER++ + LY + + V D++ + + ++L W E
Sbjct: 54 DGDT---VTLQIWDTAGTERFQSLGTPLYRGAHCCMLVFDVTSKASFSALDGWRKEFLIQ 110
Query: 136 GTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEK 186
G P P++V+GNK D++ +E S L ARQW E+
Sbjct: 111 GEPKDP--------SDFPFIVLGNKTDLSDRE----VSDKL---ARQWCEE 146
>gi|212529382|ref|XP_002144848.1| Rab small monomeric GTPase Rab7, putative [Talaromyces marneffei
ATCC 18224]
gi|210074246|gb|EEA28333.1| Rab small monomeric GTPase Rab7, putative [Talaromyces marneffei
ATCC 18224]
Length = 206
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 31/186 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V + TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 56 LVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLP-----SSEEL 196
+ P+VVIGNK DV +E R S A + + +G LP + E L
Sbjct: 116 ES--------FPFVVIGNKIDV--EENKRMISSK---RAMTFCQSKGSLPYFETSAKEAL 162
Query: 197 PLTESF 202
+ ++F
Sbjct: 163 NVEQAF 168
>gi|407035423|gb|EKE37699.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 207
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 76/173 (43%), Gaps = 26/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++++++GDSGVGK+SL+N ++ + ++ TIG K +T + ++
Sbjct: 11 LKMILIGDSGVGKSSLMNQFIEKTFTAQYKATIGADFLTKEVTINGTATT---------- 60
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +GHE++ + Y + + V D++ + SL W E + P
Sbjct: 61 ---LQIWDTAGHEKFMSFGAAFYRGSDCCLLVLDVTNEASFKSLDTWKKEFLNGANVTNP 117
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+ NK D + V +QW E G +P E
Sbjct: 118 --------NDFPFVVLINKMDEDPSKHVVS-----VSDVKQWCENNGNIPLYE 157
>gi|149719243|ref|XP_001489548.1| PREDICTED: ras-related protein Rab-38-like [Equus caballus]
Length = 211
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + S TIG +K + + D E
Sbjct: 11 KLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLQW------------DPETV 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + +
Sbjct: 59 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKNDLDSKLSL---- 114
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G P+ V++ NK D
Sbjct: 115 ----PNGKPISVVLLANKCD 130
>gi|301614231|ref|XP_002936591.1| PREDICTED: ras-related protein Rab-38-like [Xenopus (Silurana)
tropicalis]
Length = 212
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + TIG +K +++ DS+
Sbjct: 11 KILVIGDLGVGKTSIIKRYVHQNFSPHYRATIGVDFALKVLSW------------DSDTV 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + T +
Sbjct: 59 VRLQLWDIAGQERFGNMTRVYYREAVGAFIVFDVTRPATFEAVAKWKEDLDSKLTLA--- 115
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
G+PV V++ NK D
Sbjct: 116 -----NGVPVSAVLLANKCD 130
>gi|300121144|emb|CBK21525.2| unnamed protein product [Blastocystis hominis]
Length = 176
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 33/143 (23%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++++VGDSGVGKT+L + T+GV Y S N I
Sbjct: 9 KMVIVGDSGVGKTNLFQ------------EDTSATIGVDF--YSKSVQRGNKIIK----- 49
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+LWD +G ERY+ + Y G I V D++ R++ +LQ+W EI G++S+
Sbjct: 50 --TQLWDTAGQERYRAMAAAYYRGSTGAIIVFDVTHRQSFNNLQQWINEI---GSYSSS- 103
Query: 143 ASGGPGGLPVPYVVIGNKADVAA 165
+P ++IGNK D+A+
Sbjct: 104 --------DMPILIIGNKCDLAS 118
>gi|379134821|gb|AFC93432.1| Ras-like protein [Triticum aestivum]
Length = 206
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 30/186 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + TIG K + +R
Sbjct: 10 LKVIVLGDSGVGKTSLMNQYVHNKFSQQYKATIGADFVAKEVLI-------------EDR 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 57 LVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVNKSFDTLNTWHDEFLNQASPSDP 116
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLP-----SSEEL 196
P++++GNK DV + S +D W +G +P + E+
Sbjct: 117 KT--------FPFILLGNKIDVDGGKSRVVSEKKAMD----WCSSKGNIPYYETSAKEDY 164
Query: 197 PLTESF 202
+ E+F
Sbjct: 165 NVDEAF 170
>gi|449550712|gb|EMD41676.1| hypothetical protein CERSUDRAFT_79308 [Ceriporiopsis subvermispora
B]
Length = 203
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 6 LKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMV-------------DDR 52
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 53 LVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDP 112
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+GNK D+ +E R S A W + +G +P E
Sbjct: 113 --------ENFPFVVLGNKIDM--EENKRQVSQK---RAMTWCQSKGNIPYFE 152
>gi|147903317|ref|NP_001090131.1| RAB32, member RAS oncogene family [Xenopus laevis]
gi|80477119|gb|AAI08513.1| MGC130912 protein [Xenopus laevis]
Length = 222
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 44/204 (21%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K I + D+
Sbjct: 23 KVLVIGELGVGKTSVIKRYVHQLFSQHYRATIGVDFALKVINW------------DNNTL 70
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ S F L
Sbjct: 71 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDVTRGSTFEAITKWKSDL-DSKVF---L 126
Query: 143 ASGGPGGLPVPYVVIGNKAD----------------------VAAKEGTRGSSGNLVDAA 180
SGG P+P V++ NK D A E + + N+ +AA
Sbjct: 127 PSGG----PIPAVLLANKCDQKKENSIQSPHQMDLFCKENGFAAWFETSAKDNMNIDEAA 182
Query: 181 RQWVEKQGLLPSSEELPLTESFPG 204
R VE +L +++ P+ E+ G
Sbjct: 183 RCLVE--NILANAKNFPVEENDDG 204
>gi|383855948|ref|XP_003703472.1| PREDICTED: ras-related protein Rab-27A-like isoform 1 [Megachile
rotundata]
Length = 208
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 32/198 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++ L +G+SGVGKTS + G+ SR T+G K + Y ++ + +
Sbjct: 7 IKFLALGNSGVGKTSFLYQYTNGTFDSRFISTVGIDFKEKRVIYQTTNGRTQRVH----- 61
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ + Y G + + DL+ + ++ W ++ T P
Sbjct: 62 ---LQLWDTAGQERFRSLTTAFYRDSMGFLLIFDLTNELSFLEVRNWLEQLRTHAYCEDP 118
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
++ GNK+D+ E R S + AR+ EK GL+ E+
Sbjct: 119 -----------DIILCGNKSDL---EDKRVVSEH---KARELAEKHGLV-------YLET 154
Query: 202 FPGGGGLIAAAKEARYDK 219
G +A A E D+
Sbjct: 155 SAATGQNVARAVEILLDR 172
>gi|350588369|ref|XP_003482633.1| PREDICTED: ras-related protein Rab-38-like [Sus scrofa]
Length = 211
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + S TIG +K + + D E
Sbjct: 11 KLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHW------------DPETV 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + +
Sbjct: 59 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKNDLDSKLSL---- 114
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G PV V++ NK D
Sbjct: 115 ----PNGKPVSVVLLANKCD 130
>gi|260950047|ref|XP_002619320.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238846892|gb|EEQ36356.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 214
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 21/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+ V + TIG K +T + S
Sbjct: 9 LKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKDLTIDNKTVS---------- 58
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + +D++ ++ +L W E S P
Sbjct: 59 ---LQIWDTAGQERFQSLGVAFYRGADCCVLCYDVTNEKSLNNLASWKDEFLIQSNVSNP 115
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
P+++IGNK DV
Sbjct: 116 --------QDFPFIIIGNKIDV 129
>gi|260812277|ref|XP_002600847.1| hypothetical protein BRAFLDRAFT_121119 [Branchiostoma floridae]
gi|229286137|gb|EEN56859.1| hypothetical protein BRAFLDRAFT_121119 [Branchiostoma floridae]
Length = 198
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 72/173 (41%), Gaps = 28/173 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GD GVGK+SL+N V S+ TIG K I G
Sbjct: 7 LKVVLLGDGGVGKSSLMNRFVTDKFDSQSFHTIGVEFLNKDIVVDGEG------------ 54
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER+K R+ Y + + L+ ++ +L W E P
Sbjct: 55 -FTLQIWDTAGQERFKSLRTPFYRGADCCLLTFALNDVQSFKNLGMWKKEFLYYADVRDP 113
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+GNK D+A +E + W + G LP E
Sbjct: 114 --------DNFPFVVLGNKCDMADREVA-------TEQVEAWCRENGDLPLYE 151
>gi|154414735|ref|XP_001580394.1| Ras family protein [Trichomonas vaginalis G3]
gi|121914611|gb|EAY19408.1| Ras family protein [Trichomonas vaginalis G3]
Length = 215
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 20/144 (13%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++VLVVG+ G GKTSL+ V+G TIG K I + + S
Sbjct: 15 LKVLVVGEMGTGKTSLIRQYVQGFFSEFYKTTIGVDFATKEIEWDEKITIS--------- 65
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWDI+G ERY + + Y + V D+++ ++ +++W +I S F++
Sbjct: 66 ---LQLWDIAGQERYGNMTRVYYQEAVAAWVVFDVTRLQSLEMVKEWKKDIE-SKVFTST 121
Query: 142 LASGGPGGLPVPYVVIGNKADVAA 165
P+P +++GNK D+ +
Sbjct: 122 -------DQPIPCLLLGNKIDLVS 138
>gi|440798204|gb|ELR19272.1| GTPbinding protein [Acanthamoeba castellanii str. Neff]
Length = 184
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 68/151 (45%), Gaps = 26/151 (17%)
Query: 13 LNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSS 72
+ P V+V++VGD GVGKT+LV V + F + TIG K + +
Sbjct: 1 MAAAPVKFTVKVVIVGDCGVGKTALVQRFVF-NKFDKHDSTIGAAFVTKDLL-----ADG 54
Query: 73 NSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEI 132
IK +E+WD +G ERY+ + + + + V+D++ ++ L+ W E
Sbjct: 55 VLIK--------LEMWDTAGQERYRSLSPLYFRGADACLMVYDVTSSQSFADLEGWFSEF 106
Query: 133 ATSGTFSAPLASGGPGGLPVPYVVIGNKADV 163
+ G VP VV+GNK D+
Sbjct: 107 RS------------MAGAAVPMVVVGNKMDL 125
>gi|358419550|ref|XP_001252195.3| PREDICTED: ras-related protein Rab-38 isoform 1 [Bos taurus]
gi|359080887|ref|XP_002699093.2| PREDICTED: ras-related protein Rab-38 [Bos taurus]
gi|440893046|gb|ELR45967.1| Ras-related protein Rab-38 [Bos grunniens mutus]
Length = 211
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + S TIG +K + + D E
Sbjct: 11 KLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHW------------DPETV 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + +
Sbjct: 59 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKNDLDSKLSL---- 114
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G PV V++ NK D
Sbjct: 115 ----PNGKPVSVVLLANKCD 130
>gi|148704502|gb|EDL36449.1| RAB15, member RAS oncogene family, isoform CRA_c [Mus musculus]
Length = 207
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
R+L++GDSGVGKT L+ S TIG +K I + G R
Sbjct: 13 RLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTI----------EVDGIKVR- 61
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ERY+ Y + G+ V+D+S R+ + KW ++
Sbjct: 62 --IQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEY------- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVAAK 166
P G V ++IGNKAD K
Sbjct: 113 ---APEG--VQKILIGNKADEEQK 131
>gi|427781617|gb|JAA56260.1| Putative rab27a member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 246
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 22/162 (13%)
Query: 7 ERENKELNGGPPTGQ-----VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVK 61
E + E++ G +G ++ L +GDSGVGKTS + + S+ T+G K
Sbjct: 9 EESDVEMSHGQASGADYDYLIKFLALGDSGVGKTSFLYQYTNSTFNSKFISTVGIDFREK 68
Query: 62 HITYGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRT 121
ITY S G S+R +++LWD +G E+++ + + G + + DL+ ++
Sbjct: 69 RITYRSPEGG-----GRSQR-IYLQLWDTAGQEKFRSLTTAFFRDAMGFLVLFDLTSEQS 122
Query: 122 KTSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADV 163
S++ W ++ T P V+ GNKAD+
Sbjct: 123 FLSIRSWLEQLRTHAYCENP-----------DVVLCGNKADL 153
>gi|403367382|gb|EJY83510.1| hypothetical protein OXYTRI_18761 [Oxytricha trifallax]
Length = 588
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 71/146 (48%), Gaps = 24/146 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
V V++VGD+GVGKT L++ +KGS TIG K + + G+
Sbjct: 387 VIVILVGDTGVGKTHLLSRYIKGSLPKNKFPTIGVEFATKPVPLKTGGTVK--------- 437
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++WD +G ER+K S Y + G + V+D+++ ++ S++KW E+ + P
Sbjct: 438 ---AQIWDTAGQERFKAITSAHYRKSLGALIVYDITKEQSFQSVKKWMEEVKEH---AEP 491
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKE 167
+ +++GNK D+ K+
Sbjct: 492 ---------DIVIMLVGNKLDICEKQ 508
>gi|426233532|ref|XP_004010770.1| PREDICTED: ras-related protein Rab-15 [Ovis aries]
Length = 212
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
R+L++GDSGVGKT L+ S TIG +K I + G R
Sbjct: 10 RLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTI----------EVDGIKVR- 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ERY+ Y + G+ V+D+S R+ + KW ++
Sbjct: 59 --IQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEY------- 109
Query: 143 ASGGPGGLPVPYVVIGNKADVAAK 166
P G V ++IGNKAD K
Sbjct: 110 ---APEG--VQKILIGNKADEEQK 128
>gi|301779279|ref|XP_002925057.1| PREDICTED: ras-related protein Rab-38-like [Ailuropoda melanoleuca]
gi|281337581|gb|EFB13165.1| hypothetical protein PANDA_014483 [Ailuropoda melanoleuca]
Length = 211
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + S TIG +K + + D E
Sbjct: 11 KLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHW------------DPETV 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + +
Sbjct: 59 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKNDLDSKLSL---- 114
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G PV V++ NK D
Sbjct: 115 ----PNGKPVSVVLLANKCD 130
>gi|242763676|ref|XP_002340622.1| Rab small monomeric GTPase Rab7, putative [Talaromyces stipitatus
ATCC 10500]
gi|218723818|gb|EED23235.1| Rab small monomeric GTPase Rab7, putative [Talaromyces stipitatus
ATCC 10500]
Length = 206
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 31/186 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V + TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 56 LVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLP-----SSEEL 196
+ P+VVIGNK DV +E R S A + + +G LP + E L
Sbjct: 116 ES--------FPFVVIGNKIDV--EENKRMISSK---RAMTFCQSKGNLPYFETSAKEAL 162
Query: 197 PLTESF 202
+ ++F
Sbjct: 163 NVEQAF 168
>gi|148704501|gb|EDL36448.1| RAB15, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 215
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
R+L++GDSGVGKT L+ S TIG +K I + G R
Sbjct: 13 RLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTI----------EVDGIKVR- 61
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ERY+ Y + G+ V+D+S R+ + KW ++
Sbjct: 62 --IQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEY------- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVAAK 166
P G V ++IGNKAD K
Sbjct: 113 ---APEG--VQKILIGNKADEEQK 131
>gi|403347422|gb|EJY73133.1| Ras-related protein RABG2 [Oxytricha trifallax]
Length = 234
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 71/143 (49%), Gaps = 18/143 (12%)
Query: 22 VRVLVVGDSGVGKTSLVNLI--VKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDS 79
++V+++GDSGVGKTSL+ K S+P TIG K IT G S KG
Sbjct: 6 LKVIIIGDSGVGKTSLLEAFNYQKIQKNSKP--TIGAEFTKKKITLGDYPDS--KYKG-- 59
Query: 80 ERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFS 139
++ ++LWD +G ER++ + Y + + V D+SQ T SL W E+ T
Sbjct: 60 -KEVNLQLWDTAGQERFQSLCTSFYRGSDCCMLVFDVSQIETYESLDNWR-EVFQQTT-- 115
Query: 140 APLASGGPGGLPVPYVVIGNKAD 162
G +P ++IGNK+D
Sbjct: 116 ------GDQTQEIPIILIGNKSD 132
>gi|29841442|gb|AAP06474.1| SJCHGC06013 protein [Schistosoma japonicum]
gi|226466782|emb|CAX69526.1| RAB7, member RAS oncogene family [Schistosoma japonicum]
Length = 205
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 69/167 (41%), Gaps = 28/167 (16%)
Query: 28 GDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERDFFVEL 87
GDSGVGKTSL+ + ++ TIG K + +R +++
Sbjct: 15 GDSGVGKTSLITQYIDKKFSNQYKATIGADFFTKQEVF-------------DDRLVTMQI 61
Query: 88 WDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPLASGGP 147
WD +G ER++ Y + + V+D+S T +L W E + P
Sbjct: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVSMTSTFKTLDSWRNEFLVQSSPRNP------ 115
Query: 148 GGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P++VIGNK D+ R S N ARQW + G LP E
Sbjct: 116 --EKFPFIVIGNKCDL----DNRAISEN---RARQWCQANGNLPYFE 153
>gi|114052380|ref|NP_001040003.1| ras-related protein Rab-15 [Bos taurus]
gi|116255979|sp|Q1RMR4.1|RAB15_BOVIN RecName: Full=Ras-related protein Rab-15
gi|92098359|gb|AAI14761.1| RAB15, member RAS onocogene family [Bos taurus]
gi|296482998|tpg|DAA25113.1| TPA: RAB15, member RAS onocogene family [Bos taurus]
Length = 212
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
R+L++GDSGVGKT L+ S TIG +K I + G R
Sbjct: 10 RLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTI----------EVDGIKVR- 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ERY+ Y + G+ V+D+S R+ + KW ++
Sbjct: 59 --IQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEY------- 109
Query: 143 ASGGPGGLPVPYVVIGNKADVAAK 166
P G V ++IGNKAD K
Sbjct: 110 ---APEG--VQKILIGNKADEEQK 128
>gi|393240634|gb|EJD48159.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 240
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 73/141 (51%), Gaps = 25/141 (17%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++ +V+G++G GK+ L++ + SSF PSQ T+GV+ SS +IK E+
Sbjct: 19 LKFIVIGEAGTGKSCLLHYFLH-SSFKGPSQH---TIGVEF--------SSRTIK-LGEK 65
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y G + V+D++ R T TSL +W +
Sbjct: 66 RIKLQLWDTAGQERFRSVTRSYYRGAAGALLVYDITNRDTFTSLGRWLAD---------A 116
Query: 142 LASGGPGGLPVPYVVIGNKAD 162
A G P + V++GNKAD
Sbjct: 117 RALGSPN---LVTVLVGNKAD 134
>gi|380015014|ref|XP_003691507.1| PREDICTED: ras-related protein Rab-27A-like [Apis florea]
Length = 208
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 83/198 (41%), Gaps = 32/198 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++ L +G+SGVGKTS + G+ SR T+G K + Y ++ + +
Sbjct: 7 IKFLALGNSGVGKTSFLYQYTDGTFESRFISTVGIDFKEKRVIYQTANGRTQRVH----- 61
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ + Y G + + DL+ + ++ W ++ T P
Sbjct: 62 ---LQLWDTAGQERFRSLTTAFYRDSMGFLLIFDLTNELSFLEVRNWLEQLRTHAYCEDP 118
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
++ GNK D+ E R S + AR+ EK GL+ E+
Sbjct: 119 -----------DIILCGNKCDL---EDKRVVSEH---KARELAEKHGLV-------YLET 154
Query: 202 FPGGGGLIAAAKEARYDK 219
G +A A E D+
Sbjct: 155 SAATGQNVARAVELLLDR 172
>gi|21536526|gb|AAM60858.1| GTP binding protein, putative [Arabidopsis thaliana]
Length = 206
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 27/174 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNRREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD-AARQWVEKQGLLPSSE 194
P+V+IGNK DV G+S + + A+ W +G +P E
Sbjct: 116 --------ENFPFVLIGNKVDV-----DDGNSRVVSEKKAKAWCASKGNIPYFE 156
>gi|348555062|ref|XP_003463343.1| PREDICTED: ras and EF-hand domain-containing protein-like [Cavia
porcellus]
Length = 717
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 27/148 (18%)
Query: 17 PPTGQ--VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNS 74
PPT +++ VG+S VGKTSL+ + + + T+G VK I S +
Sbjct: 525 PPTPDRLFKIVFVGNSAVGKTSLLRRLCDEHFSTGIAATVGIDYRVKTINVDGSQVA--- 581
Query: 75 IKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIAT 134
++LWD +G ERY+ + +++G+I V+DL+ + + S+++W I
Sbjct: 582 ----------LQLWDTAGQERYRCITQQFFRKVDGIIIVYDLTAKESFLSVRQWLSSIEE 631
Query: 135 SGTFSAPLASGGPGGLPVPYVVIGNKAD 162
A GG VP +++GNK D
Sbjct: 632 --------AMGG----RVPVLLLGNKLD 647
>gi|345492946|ref|XP_003426961.1| PREDICTED: ras-related protein Rab-43-like [Nasonia vitripennis]
Length = 221
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 25/141 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GD G GKT +V G+ R TIG +K ++ D +R
Sbjct: 24 KIVLIGDCGTGKTCIVQKFRSGNFIQRHGNTIGVDFSMK------------TVLVDGKR- 70
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y NGVI V+D+++R + SLQ+W EI + L
Sbjct: 71 VKLQIWDTAGQERFRTITQSYYRSANGVILVYDITKRSSFLSLQRWIDEIRRYTSSHVLL 130
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
+++GNK D+
Sbjct: 131 ------------ILVGNKCDL 139
>gi|123476447|ref|XP_001321396.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121904221|gb|EAY09173.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 182
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 15/159 (9%)
Query: 12 ELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSF-SRPSQTIGCTVGVKHITYGSSGS 70
++ G P +V+++ +G++ VGK+ L+ +G+ F ++ TIG G + T ++
Sbjct: 5 DVADGQPIPKVKIVSLGETRVGKSCLIKRFCEGNRFVTQYIPTIGIDYGARQFTVDNTS- 63
Query: 71 SSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAV 130
F+V WD+SG + Y + R+ Y +G + V D++ R T T L +W
Sbjct: 64 ------------FYVHFWDMSGDDSYFEVRNEFYGDTDGFLLVFDMTARETFTQLPRWLE 111
Query: 131 EIATSGT-FSAPLASGGPGGLPVPYVVIGNKADVAAKEG 168
E G S + G V AD A K G
Sbjct: 112 EAKKYGADLSCIVLCGNKCDGSKLAVSTQEAADFAKKNG 150
>gi|407036472|gb|EKE38178.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 190
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 31/165 (18%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
++++++G+SGVGKTSL+ V TIGC K +
Sbjct: 1 MLKLILIGESGVGKTSLIQRYVMNKFEPTYKITIGCDFLAKTVYV-------------EN 47
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
+++ +++WD +GHE++ S Y +G I V D++ + T++ W E +S
Sbjct: 48 KEYNLQIWDTAGHEKFSSMVSSFYRGSDGAIIVFDVTNTSSFTAIDTWISE------YSR 101
Query: 141 PLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVE 185
L G VP ++ GNK D + + ++ARQW E
Sbjct: 102 AL-----NGKDVPIIICGNKVDCQPRLVS-------TESARQWCE 134
>gi|348572112|ref|XP_003471838.1| PREDICTED: ras-related protein Rab-27A-like [Cavia porcellus]
Length = 220
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 98/230 (42%), Gaps = 29/230 (12%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++ L +GDSGVGKTS++ G S+ T+G K + Y +SG +G +
Sbjct: 10 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDGAVGRG---Q 66
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ + + G + + DL+ ++ +++ W ++ +P
Sbjct: 67 RIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCDSP 126
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
V+ GNK+D+ + + + AR EK G +P E+
Sbjct: 127 -----------DIVLCGNKSDLEDQRVVKE------EEARALAEKYG-------VPYFET 162
Query: 202 FPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAPNPWSISPTH 251
G I+ A EA D +MK + + + + + N + + H
Sbjct: 163 SAANGTNISPAIEALLD--LIMKRMERCVDKSWIPEGVVRSNGHTAADQH 210
>gi|453085622|gb|EMF13665.1| hypothetical protein SEPMUDRAFT_148889 [Mycosphaerella populorum
SO2202]
Length = 205
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 26/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V + SQ+ T+G +T + D +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVN----KKFSQSYKATIGADFLT--------KEVLVD-DR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 56 LVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPMDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
+ P+VV+GNK DV +E R S A+ + +++G +P E
Sbjct: 116 ES--------FPFVVLGNKVDV--EESKRMIS---TKRAQAFCQQKGGIPYFE 155
>gi|73913048|gb|AAZ91462.1| RAB7 [Hordeum vulgare]
Length = 184
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 25/173 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + TIG K + +R
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFLTKEVLI-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ +RT +L W E S P
Sbjct: 56 LVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNAKRTFNTLGTWHDEFINQAGPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P++++GNK D+ + G+R A+ W +G +P E
Sbjct: 116 --------KQFPFILVGNKVDLDS--GSRRVVPE--KKAKDWCVAKGDIPYFE 156
>gi|5926718|dbj|BAA84640.1| PRA2 [Pisum sativum]
Length = 233
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 87/202 (43%), Gaps = 43/202 (21%)
Query: 10 NKELNGGPPTGQ-------VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKH 62
N+E+NG +V+V+GDS VGKT +++ K TIG K
Sbjct: 2 NQEMNGVEAEKLQEKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTKT 61
Query: 63 ITYGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTK 122
+T + IK ++WD +G ERY+ S Y G + V+D+++R+T
Sbjct: 62 VTI-----NGKLIKA--------QIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTF 108
Query: 123 TSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQ 182
+ +W E L S G + + ++IGNK D+ + G + + A +
Sbjct: 109 DHVARWVEE----------LRSHADGSIVI--MLIGNKGDLVDQRGVQ------TEDAVE 150
Query: 183 WVEKQGLLPSSEELPLTESFPG 204
+ E QGL S T +F G
Sbjct: 151 FAEDQGLFFSE-----TSAFSG 167
>gi|397635930|gb|EJK72074.1| hypothetical protein THAOC_06432 [Thalassiosira oceanica]
Length = 224
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 23/174 (13%)
Query: 17 PPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIK 76
P ++L++GD+ VGK+S++ + TIG VKH+ +S IK
Sbjct: 10 PYDHLFKLLMIGDAAVGKSSMLIRFTDDAFDEHIQSTIGVDFKVKHLEL-----NSKRIK 64
Query: 77 GDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
+ +WD +G ER++ S Y GV+ V+D+++R + +L W EI
Sbjct: 65 --------LTVWDTAGQERFRTLTSSYYRGAQGVVMVYDVTRRDSFDNLDHWLKEI---- 112
Query: 137 TFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLL 190
+P + G G V +++GNK D+ G + D A +W + G+L
Sbjct: 113 QLYSP--NSGEG---VVKLLVGNKIDLPEMGGEHERQVDR-DEAEEWAREHGML 160
>gi|395539510|ref|XP_003771711.1| PREDICTED: ras-related protein Rab-19 [Sarcophilus harrisii]
Length = 217
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 86/210 (40%), Gaps = 46/210 (21%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GDS VGKT +V G TIG V+ S++ D ++
Sbjct: 19 KIILIGDSNVGKTCVVQHFKSGLYTDSQQNTIGVDFTVR------------SLEVDGKK- 65
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y N I +DL++R T S+ W EI G + +
Sbjct: 66 VKMQIWDTAGQERFRTITQSYYRSANAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVI 125
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTESF 202
++IGNKAD+ K L + A EK GLL E
Sbjct: 126 ------------MLIGNKADLCDKRHV------LFEDACTLAEKHGLLAVLE-------- 159
Query: 203 PGGGGLIAAAKEARYDKEAVMKFFRMLIRR 232
+AKE++ E M + LI R
Sbjct: 160 -------TSAKESKNIDEVFMLMAKELIAR 182
>gi|332210934|ref|XP_003254567.1| PREDICTED: ras-related protein Rab-38 [Nomascus leucogenys]
Length = 211
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + S TIG +K + + D E
Sbjct: 11 KLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHW------------DPETV 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + +
Sbjct: 59 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLSL---- 114
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G PV V++ NK D
Sbjct: 115 ----PNGKPVSVVLLANKCD 130
>gi|149239963|ref|XP_001525857.1| GTP-binding protein ypt7 [Lodderomyces elongisporus NRRL YB-4239]
gi|146449980|gb|EDK44236.1| GTP-binding protein ypt7 [Lodderomyces elongisporus NRRL YB-4239]
Length = 214
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+ V ++ SQ T+G +T I D+ +
Sbjct: 9 LKVIILGDSGVGKTSLMQQFVN----NKFSQQYKATIGADFLT--------KEIPIDNNK 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + D++ ++ +L W E F
Sbjct: 57 SVTLQIWDTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDE------FLVQ 110
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
L P P+++IGNK DV
Sbjct: 111 LNVSNPQDF--PFIIIGNKIDV 130
>gi|66513978|ref|XP_394733.2| PREDICTED: ras-related protein Rab-27A-like isoform 1 [Apis
mellifera]
Length = 208
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 32/198 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++ L +G+SGVGKTS + G+ SR T+G K + Y ++ + +
Sbjct: 7 IKFLALGNSGVGKTSFLYQYTDGTFESRFISTVGIDFKEKRVIYQTANGRTQRVH----- 61
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ + Y G + + DL+ + ++ W ++ T P
Sbjct: 62 ---LQLWDTAGQERFRSLTTAFYRDSMGFLLIFDLTNELSFLEVRNWLEQLRTHAYCEDP 118
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
++ GNK+D+ E R S + AR+ EK GL+ E+
Sbjct: 119 -----------DIILCGNKSDL---EDKRVVSEH---KARELAEKHGLV-------YLET 154
Query: 202 FPGGGGLIAAAKEARYDK 219
G +A A E D+
Sbjct: 155 SAATGQNVARAVEILLDR 172
>gi|165377074|ref|NP_598811.3| ras-related protein Rab-15 [Mus musculus]
gi|338719887|ref|XP_003364076.1| PREDICTED: ras-related protein Rab-15-like [Equus caballus]
gi|74177394|dbj|BAE34591.1| unnamed protein product [Mus musculus]
Length = 212
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
R+L++GDSGVGKT L+ S TIG +K I + G R
Sbjct: 10 RLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTI----------EVDGIKVR- 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ERY+ Y + G+ V+D+S R+ + KW ++
Sbjct: 59 --IQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEY------- 109
Query: 143 ASGGPGGLPVPYVVIGNKADVAAK 166
P G V ++IGNKAD K
Sbjct: 110 ---APEG--VQKILIGNKADEEQK 128
>gi|11641237|ref|NP_071732.1| ras-related protein Rab-38 [Homo sapiens]
gi|114639714|ref|XP_508683.2| PREDICTED: ras-related protein Rab-38 [Pan troglodytes]
gi|297689915|ref|XP_002822380.1| PREDICTED: ras-related protein Rab-38 [Pongo abelii]
gi|397526221|ref|XP_003833034.1| PREDICTED: ras-related protein Rab-38 [Pan paniscus]
gi|12230516|sp|P57729.1|RAB38_HUMAN RecName: Full=Ras-related protein Rab-38; AltName: Full=Melanoma
antigen NY-MEL-1
gi|11119734|gb|AAG30731.1| Rab-related GTP-binding protein [Homo sapiens]
gi|16041835|gb|AAH15808.1| RAB38, member RAS oncogene family [Homo sapiens]
gi|32880027|gb|AAP88844.1| RAB38, member RAS oncogene family [Homo sapiens]
gi|61360935|gb|AAX41956.1| RAB38 member RAS oncogene family [synthetic construct]
gi|61360941|gb|AAX41957.1| RAB38 member RAS oncogene family [synthetic construct]
gi|61360949|gb|AAX41958.1| RAB38 member RAS oncogene family [synthetic construct]
gi|74418830|gb|ABA03166.1| RAB38, member RAS oncogene family [Homo sapiens]
gi|119579769|gb|EAW59365.1| RAB38, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119579770|gb|EAW59366.1| RAB38, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123980446|gb|ABM82052.1| RAB38, member RAS oncogene family [synthetic construct]
gi|123995259|gb|ABM85231.1| RAB38, member RAS oncogene family [synthetic construct]
gi|410255632|gb|JAA15783.1| RAB38, member RAS oncogene family [Pan troglodytes]
gi|410332977|gb|JAA35435.1| RAB38, member RAS oncogene family [Pan troglodytes]
Length = 211
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + S TIG +K + + D E
Sbjct: 11 KLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHW------------DPETV 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + +
Sbjct: 59 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLSL---- 114
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G PV V++ NK D
Sbjct: 115 ----PNGKPVSVVLLANKCD 130
>gi|417397209|gb|JAA45638.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 212
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
R+L++GDSGVGKT L+ S TIG +K I + G R
Sbjct: 10 RLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTI----------EVDGIKVR- 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ERY+ Y + G+ V+D+S R+ + KW ++
Sbjct: 59 --IQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEY------- 109
Query: 143 ASGGPGGLPVPYVVIGNKADVAAK 166
P G V ++IGNKAD K
Sbjct: 110 ---APEG--VQKILIGNKADEEQK 128
>gi|33150768|gb|AAP97262.1|AF136172_1 rab-related GTP-binding protein [Homo sapiens]
Length = 212
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + S TIG +K + + D E
Sbjct: 11 KLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHW------------DPETV 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + +
Sbjct: 59 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLSL---- 114
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G PV V++ NK D
Sbjct: 115 ----PNGKPVSVVLLANKCD 130
>gi|431904482|gb|ELK09865.1| Ras-related protein Rab-15 [Pteropus alecto]
Length = 212
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
R+L++GDSGVGKT L+ S TIG +K I + G R
Sbjct: 10 RLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTI----------EVDGIKVR- 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ERY+ Y + G+ V+D+S R+ + KW ++
Sbjct: 59 --IQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEY------- 109
Query: 143 ASGGPGGLPVPYVVIGNKADVAAK 166
P G V ++IGNKAD K
Sbjct: 110 ---APEG--VQKILIGNKADEEQK 128
>gi|388503938|gb|AFK40035.1| unknown [Medicago truncatula]
Length = 214
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 25/141 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGK+ L+ + SS S TIG +K +T G +
Sbjct: 18 KILLIGDSGVGKSCLLVTFISNSSVEDLSPTIGVDFKIKMLTVGG-------------KR 64
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEIATSGTFSAP 141
+ +WD +G ER++ S Y G+I V+D+++R T T+L + W+ E+ T
Sbjct: 65 LKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSEVWSKELELYSTNQEC 124
Query: 142 LASGGPGGLPVPYVVIGNKAD 162
+ +++GNK D
Sbjct: 125 VK-----------MLVGNKVD 134
>gi|340717732|ref|XP_003397331.1| PREDICTED: ras-related protein Rab-27A-like [Bombus terrestris]
Length = 208
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 32/198 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++ L +G+SGVGKTS + G+ SR T+G K + Y ++ + +
Sbjct: 7 IKFLALGNSGVGKTSFLYQYTDGTFESRFISTVGIDFKEKRVIYQTANGRTQRVH----- 61
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ + Y G + + DL+ + ++ W ++ T P
Sbjct: 62 ---LQLWDTAGQERFRSLTTAFYRDSMGFLLIFDLTNELSFLEVRNWLEQLRTHAYCEDP 118
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
++ GNK+D+ E R S + AR+ EK GL+ E+
Sbjct: 119 -----------DIILCGNKSDL---EDKRVVSEH---KARELAEKHGLV-------YLET 154
Query: 202 FPGGGGLIAAAKEARYDK 219
G +A A E D+
Sbjct: 155 SAATGQNVARAVEILLDR 172
>gi|217075322|gb|ACJ86021.1| unknown [Medicago truncatula]
Length = 207
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 40/168 (23%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGK+SL+ L SF S TIG VK+ T I G +
Sbjct: 14 KLLMIGDSGVGKSSLL-LCFTSDSFENLSPTIGVDFKVKYFT----------IDGKKLK- 61
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEIATSGTFSAP 141
+ +WD +G ER++ S Y G+I +D+++R T T+L + WA E+ T
Sbjct: 62 --LAIWDTAGQERFRTLTSSYYRGAQGIIMAYDVTRRDTFTNLSEVWAKEVDLYSTNQDC 119
Query: 142 LASGGPGGLPVPYVVIGNKAD------VAAKEGTRGSSGNLVDAARQW 183
+ +++GNK D V KEG +D AR++
Sbjct: 120 IK-----------MLVGNKVDKESDRVVTKKEG--------IDFAREY 148
>gi|356514705|ref|XP_003526044.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABC1-like
[Glycine max]
Length = 137
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 15/111 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGK+SL+ L +F S TIG VK++T G +
Sbjct: 15 KLLMIGDSGVGKSSLL-LSFTSDAFEDLSPTIGVDFKVKYVTMGG-------------KK 60
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSL-QKWAVEI 132
+ +WD +G ER++ S Y G+I V+D+++R T T+L + WA EI
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLFEIWAKEI 111
>gi|326512418|dbj|BAJ99564.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 206
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 30/186 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + TIG K + +R
Sbjct: 10 LKVIVLGDSGVGKTSLMNQYVHNKFSQQYKATIGADFVTKEVLI-------------EDR 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 57 LVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVNKSFDTLNTWHDEFLNQASPSDP 116
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLP-----SSEEL 196
P++++GNK DV + S A +W +G +P + E+
Sbjct: 117 KT--------FPFILLGNKIDVDGGKSRVVSEKK----AMEWCSSKGNIPYYETSAKEDY 164
Query: 197 PLTESF 202
+ E+F
Sbjct: 165 NVDEAF 170
>gi|226294109|gb|EEH49529.1| GTP-binding protein ypt7 [Paracoccidioides brasiliensis Pb18]
Length = 226
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 21/154 (13%)
Query: 10 NKELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSG 69
N ++G T V+V+GDSGVGKTSL+N V S TIG K +
Sbjct: 18 NFRIDGSRFTFLFPVIVLGDSGVGKTSLMNQYVNKKYSSSYKATIGADYLTKDVLV---- 73
Query: 70 SSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWA 129
+R ++LWD +G ER++ Y + + V+D++ ++ +L W
Sbjct: 74 ---------DDRLVTLQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWR 124
Query: 130 VEIATSGTFSAPLASGGPGGLPVPYVVIGNKADV 163
E + P + P+VV+GNK DV
Sbjct: 125 DEFLVQASPRDPES--------FPFVVLGNKIDV 150
>gi|432100961|gb|ELK29310.1| Ras-related protein Rab-27A [Myotis davidii]
Length = 246
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 94/222 (42%), Gaps = 29/222 (13%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++ L +GDSGVGKTS++ G S+ T+G K + Y ++G +G +
Sbjct: 35 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVGRG---Q 91
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ + + G + + DL+ ++ +++ W ++ P
Sbjct: 92 RIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENP 151
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
V+ GNK+D+ + + + AR EK G +P E+
Sbjct: 152 -----------DIVLCGNKSDLEDQRAVK------EEEARGLAEKYG-------IPYFET 187
Query: 202 FPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAPN 243
G I+ A E D +MK + + + + + PN
Sbjct: 188 SAANGTNISEAIETLLD--LIMKRMERCVDKSWIPEGVVRPN 227
>gi|345787949|ref|XP_850212.2| PREDICTED: ras-related protein Rab-38 [Canis lupus familiaris]
Length = 211
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + S TIG +K + + D E
Sbjct: 11 KLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHW------------DPETV 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + +
Sbjct: 59 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKNDLDSKLSL---- 114
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G PV V++ NK D
Sbjct: 115 ----PNGKPVSVVLLANKCD 130
>gi|332027480|gb|EGI67563.1| Ras-related protein Rab-27A [Acromyrmex echinatior]
Length = 208
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 16/167 (9%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
V+ L +G+SGVGKTS + G+ SR T+G K + Y + S +
Sbjct: 7 VKFLALGNSGVGKTSFLYQYTDGTFNSRFISTVGIDFKEKRVIYQTENGRSQRVH----- 61
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ + Y G + + DL+ + ++ W ++ T P
Sbjct: 62 ---LQLWDTAGQERFRSLTTAFYRDSMGFLLIFDLTNESSFLEVRNWLEQLRTHAYCDDP 118
Query: 142 --LASGGPGGLPVPYVVIGNKA-DVAAKEG-----TRGSSGNLVDAA 180
+ G L VV +KA D+A + G T ++G V+ A
Sbjct: 119 DIILCGNKSDLEDKRVVSEHKARDLAERHGLVYLETSAATGQNVERA 165
>gi|312380644|gb|EFR26581.1| hypothetical protein AND_07236 [Anopheles darlingi]
Length = 199
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 25/141 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GD G GKT +V G+ TIG +K +T ++
Sbjct: 25 KIVLIGDCGTGKTCIVQRFKSGNFIESHGNTIGVDFSMKAVTV-------------DDKK 71
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y NGVI V+D+++R + SLQ+W E+ ++A
Sbjct: 72 VKLQIWDTAGQERFRTITQSYYRSANGVIIVYDITKRSSFISLQRWIDEVR---RYTAS- 127
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
V VIGNK+D+
Sbjct: 128 --------NVMIFVIGNKSDL 140
>gi|240275387|gb|EER38901.1| vacuolar biogenesis protein [Ajellomyces capsulatus H143]
gi|325091228|gb|EGC44538.1| vacuolar biogenesis protein [Ajellomyces capsulatus H88]
Length = 317
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V S TIG K + +R
Sbjct: 121 LKVIVLGDSGVGKTSLMNQYVNKKYSSSYKATIGADYLTKDVLV-------------DDR 167
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 168 LVTLQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPRDP 227
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
+ P+VV+GNK DV +E R S A + + +G +P E
Sbjct: 228 ES--------FPFVVLGNKIDV--EESKRMISSK---RATTYCQSKGNIPYFE 267
>gi|157116294|ref|XP_001652810.1| rab 19, 41 and [Aedes aegypti]
gi|108876535|gb|EAT40760.1| AAEL007525-PA [Aedes aegypti]
Length = 219
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 25/143 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GD G GKT +V G+ TIG +K +T + G +
Sbjct: 23 KIVLIGDCGTGKTCIVQRFKSGNFIESHGNTIGVDFSMKAVT----------VDGKKVK- 71
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y NGVI V+D+++R + +LQ+W E+ ++A
Sbjct: 72 --LQIWDTAGQERFRTITQSYYRSANGVIIVYDITKRSSFLNLQRWIDEVR---RYTAS- 125
Query: 143 ASGGPGGLPVPYVVIGNKADVAA 165
V VIGNK D+ A
Sbjct: 126 --------NVMIFVIGNKCDLDA 140
>gi|395521174|ref|XP_003764693.1| PREDICTED: ras-related protein Rab-38-like [Sarcophilus harrisii]
Length = 211
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 20/137 (14%)
Query: 26 VVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERDFFV 85
V+GD GVGKTS++ V + S TIG +K + + D E +
Sbjct: 14 VIGDLGVGKTSIIQRYVHQNFSSHYRATIGVDFALKVLQW------------DPETVVRL 61
Query: 86 ELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPLASG 145
+LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + T
Sbjct: 62 QLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKSDLDSKLTL------- 114
Query: 146 GPGGLPVPYVVIGNKAD 162
P G PV V++ NK D
Sbjct: 115 -PNGKPVSAVLLANKCD 130
>gi|224081256|ref|XP_002306355.1| predicted protein [Populus trichocarpa]
gi|222855804|gb|EEE93351.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 26/175 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GD GVGKTSL+N + + SQ T+G +T ++ D ++
Sbjct: 9 LKVIVLGDIGVGKTSLMNQY--PYVYKKFSQQYKSTIGADFVT--------KELQID-DK 57
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ S Y + + V+D++ +++ +L W E A
Sbjct: 58 LVTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNIQKSFETLNNWHEEFVKQAADPAD 117
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
PG P+++ GNK DV G S +V AR+W +G +P E
Sbjct: 118 -----PGAF--PFILFGNKIDV------DGGSSRVVSEKKAREWCASRGDIPYFE 159
>gi|146414423|ref|XP_001483182.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 215
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+ V + TIG K IT D+ +
Sbjct: 9 LKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEITV------------DNNK 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + +D++ ++ +L W E P
Sbjct: 57 QVTLQIWDTAGQERFQSLGVAFYRGADCCVLCYDVTNEKSLNNLASWKDEFLIQSNVLNP 116
Query: 142 LASGGPGGLPVPYVVIGNKAD 162
P+++IGNK D
Sbjct: 117 --------QDFPFIIIGNKID 129
>gi|27734454|sp|Q8K386.1|RAB15_MOUSE RecName: Full=Ras-related protein Rab-15
gi|20380722|gb|AAH27769.1| RAB15, member RAS oncogene family [Mus musculus]
gi|112292989|dbj|BAF02872.1| Rab15 [Mus musculus]
Length = 212
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
R+L++GDSGVGKT L+ S TIG +K I + G R
Sbjct: 10 RLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTI----------DVDGIKVR- 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ERY+ Y + G+ V+D+S R+ + KW ++
Sbjct: 59 --IQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEY------- 109
Query: 143 ASGGPGGLPVPYVVIGNKADVAAK 166
P G V ++IGNKAD K
Sbjct: 110 ---APEG--VQKILIGNKADEEQK 128
>gi|346975339|gb|EGY18791.1| GTP-binding protein YPTM1 [Verticillium dahliae VdLs.17]
Length = 350
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 26/149 (17%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+ +++V+G GVGKTSLV KGS PSQ I TVG +T + GDS+
Sbjct: 5 EAKIVVLGSQGVGKTSLVERFCKGSF--NPSQ-ITSTVGASFMT-------KRVVDGDSD 54
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
+++WD +G ER++ + Y N I + ++ ++ + W E+ +
Sbjct: 55 TTVRLQIWDTAGQERFRSISRLYYRGANACILCYSITDAQSFAEMGLWLNELRRN----- 109
Query: 141 PLASGGPGGLPVPYV--VIGNKADVAAKE 167
LP V V+G KAD+ A++
Sbjct: 110 ---------LPADVVLHVVGTKADMVARD 129
>gi|195135378|ref|XP_002012111.1| GI16792 [Drosophila mojavensis]
gi|193918375|gb|EDW17242.1| GI16792 [Drosophila mojavensis]
Length = 266
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 8 RENKELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGS 67
R EL P +V+ VGD VGKT++VN S TIG +++
Sbjct: 51 RYQLELPRKPKLRPCKVIFVGDCAVGKTAMVNRFCYDKFQSNYKATIGVDFELENF---- 106
Query: 68 SGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK 127
SI G +F +E+WD +G ER+K Y + ++ +D+S+R + + +K
Sbjct: 107 ------SILG---HNFSLEMWDTAGQERFKCIAGAYYRNASVIVAAYDMSKRESLEAAKK 157
Query: 128 WAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKE 167
W T PL ++G KAD+ KE
Sbjct: 158 WLSSALNYNTAQKPLI-----------FLVGTKADLLTKE 186
>gi|123479672|ref|XP_001322993.1| Ras family protein [Trichomonas vaginalis G3]
gi|62736318|gb|AAX97488.1| small Rab GTPase RabX11 [Trichomonas vaginalis]
gi|121905849|gb|EAY10770.1| Ras family protein [Trichomonas vaginalis G3]
Length = 210
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 21/141 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++VVGD G GKTS++ V+G+ TIG K IT ++ +K D
Sbjct: 15 KIIVVGDMGTGKTSMIRRFVEGNFSEFYKITIGVDFANKIIT-------ADGVKCD---- 63
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + G I V D+++ T + W +I SA
Sbjct: 64 --IQLWDIAGQERFGSMTGVYYRESVGAIVVFDITRPSTFEMTKIWMDDIQAKVQTSA-- 119
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
G VP ++IGNK D+
Sbjct: 120 ------GEAVPTLLIGNKIDL 134
>gi|47224601|emb|CAG03585.1| unnamed protein product [Tetraodon nigroviridis]
Length = 212
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K I + DS+
Sbjct: 15 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVINW------------DSKTL 62
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + L
Sbjct: 63 IRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDVTRGSTFEAVSKWKHDLDS----KVKL 118
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
A+G P+P V++ NK D
Sbjct: 119 ANGN----PIPSVLLANKCD 134
>gi|426251467|ref|XP_004019443.1| PREDICTED: ras-related protein Rab-38 [Ovis aries]
Length = 211
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + S TIG +K + + D E
Sbjct: 11 KLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHW------------DPETV 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + +
Sbjct: 59 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKNDLDSKLSL---- 114
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G PV V++ NK D
Sbjct: 115 ----PNGKPVSVVLLANKCD 130
>gi|357464685|ref|XP_003602624.1| GTP-binding protein yptV3 [Medicago truncatula]
gi|355491672|gb|AES72875.1| GTP-binding protein yptV3 [Medicago truncatula]
gi|388519551|gb|AFK47837.1| unknown [Medicago truncatula]
Length = 207
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 40/168 (23%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGK+SL+ L SF S TIG VK+ T I G +
Sbjct: 14 KLLMIGDSGVGKSSLL-LCFTSDSFENLSPTIGVDFKVKYFT----------IDGKKLK- 61
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEIATSGTFSAP 141
+ +WD +G ER++ S Y G+I +D+++R T T+L + WA E+ T
Sbjct: 62 --LAIWDTAGQERFRTLTSSYYRGAQGIIMAYDVTRRDTFTNLSEVWAKEVDLYSTNQDC 119
Query: 142 LASGGPGGLPVPYVVIGNKAD------VAAKEGTRGSSGNLVDAARQW 183
+ +++GNK D V KEG +D AR++
Sbjct: 120 IK-----------MLVGNKVDKESDRVVTKKEG--------IDFAREY 148
>gi|50345016|ref|NP_001002178.1| ras-related protein rab-7-like [Danio rerio]
gi|49117792|gb|AAH72717.1| Zgc:91909 [Danio rerio]
gi|182888604|gb|AAI63969.1| Zgc:91909 protein [Danio rerio]
Length = 204
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 28/173 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKEVMV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ T +L W E + S P
Sbjct: 56 LVTMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPTTFKTLDSWRDEFLIQASTSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+GNK D+ ++ + A+ W + + +P E
Sbjct: 116 --------ENFPFVVLGNKIDLDNRQVS-------TKRAQAWCQSKNNIPYFE 153
>gi|339244027|ref|XP_003377939.1| GTP-binding protein YPT1 [Trichinella spiralis]
gi|316973196|gb|EFV56816.1| GTP-binding protein YPT1 [Trichinella spiralis]
Length = 240
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 69/144 (47%), Gaps = 29/144 (20%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+V+V+GD GVGKT L G S + TIG K I + G++ R
Sbjct: 47 KVIVLGDPGVGKTCLTFRFCNGRFPSNSTPTIGVDFREKII----------DLDGETLR- 95
Query: 83 FFVELWDISGHERYKDCRSIL---YSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFS 139
V+ WD +G ER++ +S++ Y +N VIFV+D+SQ + +L +W E F
Sbjct: 96 --VQFWDTAGQERFQ--QSMIAHYYRNVNAVIFVYDVSQISSFRNLIRWIEECQKHNIFG 151
Query: 140 APLASGGPGGLPVPYVVIGNKADV 163
VP ++IGNK D+
Sbjct: 152 T-----------VPMILIGNKCDL 164
>gi|269972626|emb|CBE66893.1| CG5915-PA [Drosophila ananassae]
Length = 207
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 78/174 (44%), Gaps = 30/174 (17%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + ++R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVV-------------NDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ + +L W E + P
Sbjct: 56 VVTMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKE-GTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+GNK D+ ++ TR A+QW + + +P E
Sbjct: 116 --------EHFPFVVLGNKVDLDNRQVSTR--------RAQQWCQSKNDIPYYE 153
>gi|54696028|gb|AAV38386.1| RAB7, member RAS oncogene family-like 1 [synthetic construct]
gi|61367282|gb|AAX42976.1| RAB7 member RAS oncogene family-like 1 [synthetic construct]
Length = 204
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + S ++
Sbjct: 9 KVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGGDFALKVLQW----SDYEIVR------ 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ Q+W ++ + T
Sbjct: 59 --LQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G PVP +++ NK D++
Sbjct: 113 ----PNGEPVPCLLLANKCDLS 130
>gi|290983359|ref|XP_002674396.1| rab family small GTPase [Naegleria gruberi]
gi|284087986|gb|EFC41652.1| rab family small GTPase [Naegleria gruberi]
Length = 221
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 20/141 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LVVGD G GKTS++ V + TIG +K + + D
Sbjct: 14 KILVVGDIGTGKTSIIKRYVHNIFSNTYKSTIGVDFALKVLNW------------DDNII 61
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + G V+D+++ T ++QKW +I
Sbjct: 62 IRLQLWDIAGQERFGSMTRVYYKEAVGAFVVYDITRPPTFEAVQKWKSDIEHKVFL---- 117
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
P P+P V++ NK D+
Sbjct: 118 ----PDERPIPCVLLANKCDL 134
>gi|114051368|ref|NP_001040368.1| Rab7 [Bombyx mori]
gi|95102652|gb|ABF51264.1| Rab7 [Bombyx mori]
Length = 208
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 28/173 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V D++ T SL+ W E F
Sbjct: 56 IVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDE------FLIQ 109
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
+ P P+V++GNK D+ R S V +QW + + +P E
Sbjct: 110 ASPRDPDNF--PFVILGNKVDL----DNRAVS---VKRGQQWCQSKNDIPYFE 153
>gi|18421886|ref|NP_568566.1| RAB GTPase homolog G1 [Arabidopsis thaliana]
gi|75164694|sp|Q948K6.1|RABG1_ARATH RecName: Full=Ras-related protein RABG1; Short=AtRABG1; AltName:
Full=Ras-related protein Rab78; Short=AtRab78
gi|15718422|dbj|BAB68378.1| AtRab78 [Arabidopsis thaliana]
gi|332007072|gb|AED94455.1| RAB GTPase homolog G1 [Arabidopsis thaliana]
Length = 204
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 73/167 (43%), Gaps = 31/167 (18%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+++++++GDSGVGKTSL+ + TI + K I +E
Sbjct: 5 KLKIILLGDSGVGKTSLLKRYNDKDFKQLHNSTIYVDLVTKEICI-------------AE 51
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
R +++WD +G ER+K S Y + + V+D++ +T S+ W E
Sbjct: 52 RQVILQIWDTAGQERFKSLPSRFYRDTDCCVLVYDVNTLKTFESIDNWHDEFIKQANPET 111
Query: 141 PLASGGPGGLPVPYVVIGNKAD-------VAAKEGTR---GSSGNLV 177
P P+V++GNK D V AKE GS GN+V
Sbjct: 112 P--------TKFPFVLMGNKTDVNNGKPRVVAKEIADQWCGSKGNIV 150
>gi|339264154|ref|XP_003366798.1| GTP-binding protein YPT1 [Trichinella spiralis]
gi|316963603|gb|EFV49138.1| GTP-binding protein YPT1 [Trichinella spiralis]
Length = 240
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 69/144 (47%), Gaps = 29/144 (20%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+V+V+GD GVGKT L G S + TIG K I + G++ R
Sbjct: 47 KVIVLGDPGVGKTCLTFRFCNGRFPSNSTPTIGVDFREKII----------DLDGETLR- 95
Query: 83 FFVELWDISGHERYKDCRSIL---YSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFS 139
V+ WD +G ER++ +S++ Y +N VIFV+D+SQ + +L +W E F
Sbjct: 96 --VQFWDTAGQERFQ--QSMIAHYYRNVNAVIFVYDVSQISSFRNLIRWIEECQKHNIFG 151
Query: 140 APLASGGPGGLPVPYVVIGNKADV 163
VP ++IGNK D+
Sbjct: 152 T-----------VPMILIGNKCDL 164
>gi|440301863|gb|ELP94249.1| hypothetical protein EIN_186960 [Entamoeba invadens IP1]
Length = 205
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 73/174 (41%), Gaps = 28/174 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V S TIG K + +
Sbjct: 8 LKVIILGDSGVGKTSLMNQFVNHKYSSVYKATIGADFLTKDLVVDN-------------H 54
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+ +++WD +G+ER++ Y + VHD++ +T SL W E
Sbjct: 55 EVTMQIWDTAGNERFQSLGVAFYRGADCCALVHDVNDPKTFDSLNNWRDEF--------- 105
Query: 142 LASGGPGGLP-VPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
L P P+VV+GNK D GS + + QW + +P E
Sbjct: 106 LVQAQPKNTDQFPFVVLGNKID-----SYDGSVDAIHKKSEQWCSEHFNIPFFE 154
>gi|295670409|ref|XP_002795752.1| GTP-binding protein ypt7 [Paracoccidioides sp. 'lutzii' Pb01]
gi|225684456|gb|EEH22740.1| GTP-binding protein yptV5 [Paracoccidioides brasiliensis Pb03]
gi|226284837|gb|EEH40403.1| GTP-binding protein ypt7 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 205
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 21/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V S TIG K + +R
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVNKKYSSSYKATIGADYLTKDVLV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 56 LVTLQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLVQASPRDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
+ P+VV+GNK DV
Sbjct: 116 ES--------FPFVVLGNKIDV 129
>gi|224080973|ref|XP_002306250.1| predicted protein [Populus trichocarpa]
gi|222855699|gb|EEE93246.1| predicted protein [Populus trichocarpa]
Length = 209
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 28/162 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGK+SL+ L +F S TIG VK + G ++
Sbjct: 15 KLLMIGDSGVGKSSLL-LSFTSDTFEDLSPTIGVDFKVKFVNIGG-------------KN 60
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEIATSGTFSAP 141
+ +WD +G ER++ S Y G+I V+D+++R T T+L + WA EI T
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEIWAKEIDLYSTNQDC 120
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQW 183
+ +++GNK D + G ++ AR++
Sbjct: 121 IK-----------MLVGNKVDKESDRAVTKKEG--INFAREY 149
>gi|145519684|ref|XP_001445703.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831187|emb|CAI39259.1| rab_C95 [Paramecium tetraurelia]
gi|124413169|emb|CAK78306.1| unnamed protein product [Paramecium tetraurelia]
Length = 180
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 28/142 (19%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
Q ++LV+GD VGKT++++ + G + + TI V KH+ S+ S
Sbjct: 21 QYKILVLGDPFVGKTAILDRYINGDFSEKYNSTIA--VDFKHVQPSSNIS---------- 68
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
+ WD SG + + + R+ Y N ++ V DLS R+T +L W E
Sbjct: 69 ----LNFWDFSGQQEFVEVRNEFYKDANMIMLVFDLSSRKTLETLDMWVRE--------- 115
Query: 141 PLASGGPGGLPVPYVVIGNKAD 162
+ G +P +V+GNK +
Sbjct: 116 ---ANDYGAANIPILVVGNKKE 134
>gi|410972497|ref|XP_003992695.1| PREDICTED: ras-related protein Rab-38 [Felis catus]
Length = 211
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + S TIG +K + + D E
Sbjct: 11 KLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHW------------DPETV 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + +
Sbjct: 59 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKNDLDSKLSL---- 114
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G PV V++ NK D
Sbjct: 115 ----PNGKPVSVVLLANKCD 130
>gi|350419993|ref|XP_003492364.1| PREDICTED: ras-related protein Rab-27A-like [Bombus impatiens]
Length = 208
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 25/169 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++ L +G+SGVGKTS + G+ SR T+G K + Y ++ + +
Sbjct: 7 IKFLALGNSGVGKTSFLYQYTDGTFESRFISTVGIDFKEKRVIYQTANGRTQRVH----- 61
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ + Y G + + DL+ + ++ W ++ T P
Sbjct: 62 ---LQLWDTAGQERFRSLTTAFYRDSMGFLLIFDLTNELSFLEVRNWLEQLRTHAYCEDP 118
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLL 190
++ GNK+D+ E R S + AR+ EK GL+
Sbjct: 119 -----------DIILCGNKSDL---EDKRVVSEH---KARELAEKHGLV 150
>gi|302848283|ref|XP_002955674.1| RabC/Rab18 [Volvox carteri f. nagariensis]
gi|300259083|gb|EFJ43314.1| RabC/Rab18 [Volvox carteri f. nagariensis]
Length = 232
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 27/145 (18%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQ-TIGCTVGVKHITYGSSGSSSNSIKGDSE 80
V+V+ VG +GVGKT L+ + FS+ +Q TIGC K + +
Sbjct: 21 VKVVFVGSAGVGKTCLIRRLFT-DKFSQETQPTIGCDFQFKRYKFDNKSVG--------- 70
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSL-QKWAVEIATSGTFS 139
V LWD +G ER++ + Y G++FV+D+++R T SL Q W E++ TF
Sbjct: 71 ----VTLWDTAGAERFQAVTANYYRGAQGIVFVYDVTRRDTLDSLGQHWLPEVSRHCTFP 126
Query: 140 APLASGGPGGLPVPYVVIGNKADVA 164
+ +V+GNK D+
Sbjct: 127 EAIK-----------MVVGNKIDMV 140
>gi|443723889|gb|ELU12108.1| hypothetical protein CAPTEDRAFT_157234 [Capitella teleta]
Length = 212
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 31/172 (18%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GD+GVGKT +V G+ R TIG +K I N +K
Sbjct: 18 KIVLIGDAGVGKTCVVQRFKTGTFLERQGNTIGVDFTMKTINL-----DGNKVK------ 66
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y N VI +D+++ ++ + Q+W ++ S
Sbjct: 67 --LQVWDTAGQERFRTITQSYYRSANAVIMAYDITKLQSFENCQRWLDDVKKYAAAS--- 121
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
+ ++IGNK D+ + + SS ARQ+ ++ + E
Sbjct: 122 ---------IVKLLIGNKNDLETQREVKFSS------ARQFANHHNMIDAIE 158
>gi|426370059|ref|XP_004051994.1| PREDICTED: ras-related protein Rab-38 [Gorilla gorilla gorilla]
Length = 211
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + S TIG +K + + D E
Sbjct: 11 KLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHW------------DPETV 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + +
Sbjct: 59 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLSL---- 114
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G PV V++ NK D
Sbjct: 115 ----PNGKPVSVVLLANKCD 130
>gi|399163149|gb|AFP33150.1| rab-7, partial [Caenorhabditis elegans]
Length = 208
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 28/201 (13%)
Query: 15 GGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNS 74
G ++V+++GDSGVGKTSL+N V R S T+G +T
Sbjct: 2 GTRKKALLKVIILGDSGVGKTSLMNQYVN----RRFSNQYKATIGADFLT--------RD 49
Query: 75 IKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIAT 134
+ D +R +++WD +G ER++ Y + + D++ + SL W E
Sbjct: 50 VNID-DRTVTLQIWDTAGQERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLI 108
Query: 135 SGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
+ P P+V++GNK D+ E R S A+ W + +G +P
Sbjct: 109 QASPRDP--------DHFPFVLLGNKVDL---ESQRAVSSK---RAQSWCQTKGNIPYY- 153
Query: 195 ELPLTESFPGGGGLIAAAKEA 215
E+ E+ +A A++A
Sbjct: 154 EVSAKEALNVEAAFLAIARDA 174
>gi|195402069|ref|XP_002059632.1| GJ14874 [Drosophila virilis]
gi|194147339|gb|EDW63054.1| GJ14874 [Drosophila virilis]
Length = 202
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 25/140 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GD+GVGKT L+ V+ +R + CTVGV S + I G +
Sbjct: 8 KILMLGDAGVGKTCLLQRFVE----NRFTGNYKCTVGV------DSKIRTVEISGHKVK- 56
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ERY+ S Y + G+I V D ++RR+ ++ W EI
Sbjct: 57 --LQIWDTAGEERYRSMMSSYYRHVQGIILVFDTTRRRSYQNVDYWLKEI---------- 104
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
V +++GNK D
Sbjct: 105 --DKHAATNVRILLVGNKCD 122
>gi|149051504|gb|EDM03677.1| rCG61451, isoform CRA_a [Rattus norvegicus]
Length = 204
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
R+L++GDSGVGKT L+ S TIG +K I + G R
Sbjct: 10 RLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTI----------EVDGIKVR- 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ERY+ Y + G+ V+D+S R+ + KW + +
Sbjct: 59 --IQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWV----------SDV 106
Query: 143 ASGGPGGLPVPYVVIGNKADVAAK 166
P G V ++IGNKAD K
Sbjct: 107 DEYAPEG--VQKILIGNKADEEQK 128
>gi|365983826|ref|XP_003668746.1| hypothetical protein NDAI_0B04680 [Naumovozyma dairenensis CBS 421]
gi|343767513|emb|CCD23503.1| hypothetical protein NDAI_0B04680 [Naumovozyma dairenensis CBS 421]
Length = 223
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 18/152 (11%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++G+S VGKTS+V I G F + + TIG K I + N I+ +
Sbjct: 13 LKVVLLGESSVGKTSIVTKISTGK-FQKGAATIGAAFTTKQIQF-------NEIEENGVE 64
Query: 82 DFF---VELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTF 138
F +E+WD +G ERY+ + Y + + V DL+Q + + W E+
Sbjct: 65 QCFKVSIEIWDTAGQERYRSLTPMYYRNTDVALIVFDLTQEASLKKARSWIDEL------ 118
Query: 139 SAPLASGGPGGLPVPYVVIGNKADVAAK-EGT 169
+ L S + +++ NK D+ AK +GT
Sbjct: 119 KSYLDSSSRRDKHISMILVANKVDLVAKNDGT 150
>gi|351721968|ref|NP_001235436.1| uncharacterized protein LOC100526880 [Glycine max]
gi|255631052|gb|ACU15890.1| unknown [Glycine max]
Length = 209
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 40/168 (23%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGK+SL+ L +F S TIG + VK++ G +
Sbjct: 15 KLLMIGDSGVGKSSLL-LSFTSDAFEDLSPTIGVDIKVKYVMMGG-------------KK 60
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEIATSGTFSAP 141
+ +WD +G ER++ S Y G+I V+D+++R T T+L + WA EI T
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEIWAKEIDLYSTNQDC 120
Query: 142 LASGGPGGLPVPYVVIGNKAD------VAAKEGTRGSSGNLVDAARQW 183
+ ++ GNK D V KEG +D AR++
Sbjct: 121 IK-----------MLAGNKLDKDGDRVVTKKEG--------IDFAREY 149
>gi|297801642|ref|XP_002868705.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314541|gb|EFH44964.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 222
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 27/176 (15%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+++++++G+SGVGKTSL + G F R TVG+ ++ + D E
Sbjct: 42 KLKIILLGNSGVGKTSLTKRYI-GEEFKRLHMN---TVGMDF--------TNKELCVDKE 89
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
+ +++WD +G ER+ S Y N + V+D++ + SL W +
Sbjct: 90 Q-VTLQIWDTAGQERFHSITSGFYRDANCCVLVYDVNILESFESLDIWHAQFVEEAD--- 145
Query: 141 PLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
P+ P +P+V++GNK DV +G + +V + A QW E +G + E
Sbjct: 146 PIT---PDKFRIPFVLMGNKTDV------KGRTSPVVEKEKAVQWCETKGEIAYFE 192
>gi|401885802|gb|EJT49887.1| putative Ras-related protein Rab-18 [Trichosporon asahii var.
asahii CBS 2479]
Length = 222
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 112/257 (43%), Gaps = 43/257 (16%)
Query: 18 PTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKG 77
P +++L++G+S VGK+SL+ L F +T T+GV S++
Sbjct: 9 PPSNLKLLLIGNSSVGKSSLL-LRFTDDDFLSEEET-AATIGVDF--------KVKSVEV 58
Query: 78 DSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGT 137
D R + + +WD +G ER++ S Y GVI V+D++QR T L KW EI T
Sbjct: 59 DGRR-YKLSIWDTAGQERFRTLTSSYYRGAQGVILVYDVTQRNTFDELIKWFREI---DT 114
Query: 138 FSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELP 197
+ A V +++GNK D R + + + RQ ++G
Sbjct: 115 YCAE---------DVVKIIVGNKVDKVTLVAIRRADESQ-EFTRQVTTEEG--------- 155
Query: 198 LTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAPNPWSISPTHKPIQRL 257
++F G + A+ + V F++L+RR + P+ W+ P +P++
Sbjct: 156 --QAFADRMGTLFMECSAK-TRVGVNDAFQVLVRRI-----LETPSLWTRGP--QPVRTP 205
Query: 258 DENSSDDDKFYSSGYSS 274
+ +D Y SG S
Sbjct: 206 NVQLQEDAPGYLSGCSC 222
>gi|156371538|ref|XP_001628820.1| predicted protein [Nematostella vectensis]
gi|156215806|gb|EDO36757.1| predicted protein [Nematostella vectensis]
Length = 241
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 20/141 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ +G TIG +K I + D +
Sbjct: 18 KVLVIGEYGVGKTSIIRRYTEGYFSPNYKLTIGVDFALKIIHW------------DEKTK 65
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWD++GHER+ + Y I V DLS+ T ++ KW ++ +
Sbjct: 66 INLQLWDVAGHERFGHMTRVYYKYAIAAIIVFDLSRSATFDAILKWYRDVNQKVMLT--- 122
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
P+P +++ NK D+
Sbjct: 123 -----NENPIPVIILANKCDL 138
>gi|8394142|ref|NP_059013.1| ras-related protein Rab-27A [Rattus norvegicus]
gi|131838|sp|P23640.1|RB27A_RAT RecName: Full=Ras-related protein Rab-27A; Short=Rab-27; AltName:
Full=GTP-binding protein Ram; AltName: Full=Ram p25
gi|452229|dbj|BAA04167.1| low Mr GTP-binding protein [Rattus sp.]
gi|68534738|gb|AAH98667.1| RAB27A, member RAS oncogene family [Rattus norvegicus]
gi|149028767|gb|EDL84108.1| RAB27A, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|149028768|gb|EDL84109.1| RAB27A, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|149028769|gb|EDL84110.1| RAB27A, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|227333|prf||1702217A GTP binding protein ram
Length = 221
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 29/203 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++ L +GDSGVGKTS++ G S+ T+G K + Y ++G +G +
Sbjct: 10 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGTVGRG---Q 66
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ + + G + + DL+ ++ +++ W ++ P
Sbjct: 67 RIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENP 126
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
V+ GNK+D+ + + + AR+ EK G +P E+
Sbjct: 127 -----------DIVLCGNKSDLEDQRAVKE------EEARELAEKYG-------IPYFET 162
Query: 202 FPGGGGLIAAAKEARYDKEAVMK 224
G I+ A E D +MK
Sbjct: 163 SAANGTNISQAIEMLLD--LIMK 183
>gi|223973143|gb|ACN30759.1| unknown [Zea mays]
gi|413920115|gb|AFW60047.1| hypothetical protein ZEAMMB73_972006 [Zea mays]
Length = 173
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 26/141 (18%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGK+SL+ L SF S TIG VK +T G +
Sbjct: 21 KLLLIGDSGVGKSSLL-LRFTADSFEDLSPTIGVDFKVKMVTIGG-------------KK 66
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEIATSGTFSAP 141
+ +WD +G ER++ S Y GVI V+D+++R T T+L WA EI T
Sbjct: 67 LKLAIWDTAGQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDC 126
Query: 142 LASGGPGGLPVPYVVIGNKAD 162
+ +++GNK D
Sbjct: 127 IK-----------MLVGNKVD 136
>gi|198413093|ref|XP_002130668.1| PREDICTED: similar to RAB32, member RAS oncogene family [Ciona
intestinalis]
Length = 208
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + D E
Sbjct: 11 KVLVIGELGVGKTSVIKRYVHQIFSQHYRATIGVDFALKVVHW------------DGETL 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D ++ T ++ KW ++ T
Sbjct: 59 IRLQLWDIAGQERFGNMTRVYYREAVGAFIVFDATRASTFEAVNKWKNDLDNKVTL---- 114
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G +P V++GNK D
Sbjct: 115 ----PDGRNIPTVLLGNKID 130
>gi|156387558|ref|XP_001634270.1| predicted protein [Nematostella vectensis]
gi|156221351|gb|EDO42207.1| predicted protein [Nematostella vectensis]
Length = 214
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 12 ELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSS 71
E P ++V++VGDS GKT+L+N V+ + T+ S
Sbjct: 2 EETSDPSCRNIKVILVGDSECGKTALLNAYVRNQFNEKYEATVF-------------NSL 48
Query: 72 SNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTS-LQKWAV 130
S +++ D ER + LWD SGHE Y R + Y+ ++ V+ D+S+ +T S L+KW +
Sbjct: 49 STAVEVDGER-IELTLWDTSGHEDYDHVRPLSYNNVDIVLICFDISRPKTADSILEKWII 107
Query: 131 EIA 133
E+
Sbjct: 108 EVC 110
>gi|302855274|ref|XP_002959134.1| RabC/Rab18 [Volvox carteri f. nagariensis]
gi|549810|sp|P36862.1|YPTV3_VOLCA RecName: Full=GTP-binding protein yptV3
gi|409164|gb|AAA34252.1| GTP-binding protein [Volvox carteri]
gi|300255496|gb|EFJ39798.1| RabC/Rab18 [Volvox carteri f. nagariensis]
Length = 203
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 27/161 (16%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VL+VGDSGVGK+ ++ G + TIG VK++T D +R
Sbjct: 11 KVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLT------------ADGKR- 57
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQ-KWAVEIATSGTFSAP 141
+ +WD +G ER++ S Y G+IFV+D+++R T SL+ W E T +
Sbjct: 58 CKLTIWDTAGQERFRTLTSSYYRGAQGIIFVYDVTRRDTFESLEANWMREFDIYSTVESA 117
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQ 182
+ +V+ NK D++A+ G+ D AR+
Sbjct: 118 IK-----------MVVANKVDLSAQRQVSSEEGH--DFARR 145
>gi|195427185|ref|XP_002061658.1| GK17067 [Drosophila willistoni]
gi|194157743|gb|EDW72644.1| GK17067 [Drosophila willistoni]
Length = 277
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 24/160 (15%)
Query: 8 RENKELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGS 67
R E+ P +V+ VGD VGKT++VN S TIG +++
Sbjct: 48 RYQLEMPRKPKLRPCKVIFVGDCSVGKTAIVNRFCYDKFQSNYKATIGVDFELENF---- 103
Query: 68 SGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK 127
+I G +F +E+WD +G ER+K Y N ++ +D+S+R + S +K
Sbjct: 104 ------NILG---HNFSLEMWDTAGQERFKCIAGAYYRNANVIVVTYDMSKRDSLDSAKK 154
Query: 128 WAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKE 167
W T + PL ++G K+D+ KE
Sbjct: 155 WLASALNYNTSTRPLI-----------FLVGTKSDLLTKE 183
>gi|407037098|gb|EKE38485.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 202
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 25/147 (17%)
Query: 17 PPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIK 76
G+++ +++G+S VGKTSL+N++ G T+ S S + ++
Sbjct: 6 TKVGEIKAIIIGESSVGKTSLLNVLENGKLVGDIKATV------------SIDSHTKEVQ 53
Query: 77 GDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
D +R F + ++D +G ER++ S Y +NG+I V D++ ++T +Q W EI +
Sbjct: 54 VDGKR-FKLRIYDTAGQERFRSMVSSYYRDVNGIIIVFDVTDKKTFDQVQYWMDEIKKNT 112
Query: 137 TFSAPLASGGPGGLPVPYVVIGNKADV 163
+ V++GNK+D+
Sbjct: 113 QVYTYI------------VLVGNKSDL 127
>gi|348524951|ref|XP_003449986.1| PREDICTED: ras-related protein Rab-32-like isoform 2 [Oreochromis
niloticus]
Length = 206
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K I + DS+
Sbjct: 8 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVINW------------DSKTL 55
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + L
Sbjct: 56 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDVTRGSTFDAVSKWKHDLDS----KVKL 111
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
A+G P+P V++ NK D
Sbjct: 112 ANGN----PIPSVLLANKCD 127
>gi|148237858|ref|NP_001091380.1| uncharacterized protein LOC100037231 [Xenopus laevis]
gi|125858912|gb|AAI29780.1| LOC100037231 protein [Xenopus laevis]
Length = 209
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 22/149 (14%)
Query: 16 GPPTGQV--RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSN 73
G P ++ +VLVVGD GVGKTS++ V TIG +K + +
Sbjct: 2 GSPQREILCKVLVVGDLGVGKTSIIQRYVHNVFSQCYRATIGVDFALKIVNW-------- 53
Query: 74 SIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIA 133
D + ++LWDI+G ER+ + Y + G + V DL + T S+ +W ++
Sbjct: 54 ----DLDTVVRLQLWDIAGQERFGHMTRLYYREAVGAVVVCDLGRVATVESVSRWKEDLD 109
Query: 134 TSGTFSAPLASGGPGGLPVPYVVIGNKAD 162
+ G P+P +++GNK D
Sbjct: 110 SKVCLQ--------NGNPIPVILLGNKCD 130
>gi|281210631|gb|EFA84797.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 221
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 29/168 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GDSGVGK++L++ + TIG + I + +IK
Sbjct: 16 KIVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRTIV-----TEGKTIKA----- 65
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++WD +G ERY+ S Y G + V+D++++ T S+++W E L
Sbjct: 66 ---QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWLTE----------L 112
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLL 190
+ +++GNK+D+ R D A+++ EK LL
Sbjct: 113 RENADRNFDIEIMLVGNKSDL------RHLREVSTDEAKEFAEKHKLL 154
>gi|428672346|gb|EKX73260.1| Ras-related protein Rab7 small GTP-binging protein [Babesia equi]
Length = 215
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 27/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++++++GDSGVGKTSL+N + ++ TIG + +T ++
Sbjct: 8 LKIIILGDSGVGKTSLMNQFINKKFTNQYRATIGADFLTQEMTV-------------DDK 54
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+ +++WD +G ER++ Y + + V+D + ++T S++ W E F
Sbjct: 55 EVTLQIWDTAGQERFQSLGKAFYRGADCCMLVYDTTNQKTFESVESWKSE------FLIQ 108
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
+ P P+ +IGNK D A R S N A W + +P E
Sbjct: 109 VEPKDPDSF--PFALIGNKIDDTA---NRKVSSN---KALTWCKANNNIPHFE 153
>gi|386781459|ref|NP_001247882.1| ras-related protein Rab-7L1 [Macaca mulatta]
gi|402857442|ref|XP_003893264.1| PREDICTED: ras-related protein Rab-7L1 [Papio anubis]
gi|402857444|ref|XP_003893265.1| PREDICTED: ras-related protein Rab-7L1 [Papio anubis]
gi|355558842|gb|EHH15622.1| hypothetical protein EGK_01737 [Macaca mulatta]
gi|355745985|gb|EHH50610.1| hypothetical protein EGM_01467 [Macaca fascicularis]
gi|380786041|gb|AFE64896.1| ras-related protein Rab-7L1 isoform 1 [Macaca mulatta]
gi|383411345|gb|AFH28886.1| ras-related protein Rab-7L1 isoform 1 [Macaca mulatta]
Length = 203
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + S S ++
Sbjct: 9 KVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQW----SDSEIVR------ 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ Q+W ++ + T
Sbjct: 59 --LQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G VP +++ NK D++
Sbjct: 113 ----PNGELVPCLLLANKCDLS 130
>gi|440294253|gb|ELP87270.1| rab11, putative [Entamoeba invadens IP1]
Length = 207
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++VVGDSGVGKT L V TIG +++Y S IK
Sbjct: 8 KIVVVGDSGVGKTCLCQRYVNNGFTGGDKPTIGV-----NLSYSMLKISGTMIK------ 56
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
VELWD +G E+++ S+ Y G I V+DL+ R + + +Q W +
Sbjct: 57 --VELWDTAGLEKFQTIPSLFYRGSIGAIVVYDLTNRESFSHVQSWIEKYQ--------- 105
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
GG +P ++IGNK+DV
Sbjct: 106 ELGGMTNIPRSILLIGNKSDV 126
>gi|91086487|ref|XP_970606.1| PREDICTED: similar to rab 19, 41 and [Tribolium castaneum]
gi|270009806|gb|EFA06254.1| hypothetical protein TcasGA2_TC009113 [Tribolium castaneum]
Length = 221
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 25/141 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GD G GKT +V G+ R TIG +K + + G +
Sbjct: 23 KIVLIGDCGTGKTCIVQRFKNGTFIERHGNTIGVDFSMKTVM----------VDGKKVK- 71
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y NGVI V+D+++R + S+ +W E+ S L
Sbjct: 72 --LQIWDTAGQERFRTITQSYYRSANGVIIVYDITKRSSFLSVARWVEEVRRYSGSSVLL 129
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
A ++GNKAD+
Sbjct: 130 A------------LVGNKADM 138
>gi|67466012|ref|XP_649164.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56465533|gb|EAL43777.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790174|dbj|BAD82883.1| small GTPase EhRabX35 [Entamoeba histolytica]
gi|449708662|gb|EMD48081.1| small GTPase EhRabX35, putative [Entamoeba histolytica KU27]
Length = 194
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 29/144 (20%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
Q++V +VG+S VGK+S+ N+I KG F + S TIG + TY E
Sbjct: 6 QIKVTLVGESSVGKSSICNVISKGV-FEKTSATIGAEFIKFNRTY-------------KE 51
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
+ V L+D SG ERY Y + N VI V+D+S++ T L+ W ++
Sbjct: 52 QQVLVSLFDTSGEERYHSIPQSYYRKSNAVIMVYDISRKETFEQLEYWLNDV-------- 103
Query: 141 PLASGGPGGLPVPYVV-IGNKADV 163
G + ++ +GNK D+
Sbjct: 104 ------KGNCEIDTIICVGNKIDL 121
>gi|112983262|ref|NP_001037614.1| small GTP binding protein RAB5 [Bombyx mori]
gi|99082892|gb|ABF66621.1| small GTP binding protein RAB5 [Bombyx mori]
Length = 213
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 33/179 (18%)
Query: 14 NGGPPT--GQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSS 71
NG P T Q +++++G+S VGK+SLV VKG TIG + I +
Sbjct: 13 NGAPQTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFD----- 67
Query: 72 SNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE 131
D+ F E+WD +G ERY + Y I V+D++ + T + W E
Sbjct: 68 ------DTTVKF--EIWDTAGQERYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKE 119
Query: 132 IATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLL 190
+ + S +A + GNK+D+AAK + A+ + ++ GLL
Sbjct: 120 LQRQASPSIVIA------------LAGNKSDLAAKRMVE------FEEAQAYADENGLL 160
>gi|328855808|gb|EGG04932.1| hypothetical protein MELLADRAFT_88361 [Melampsora larici-populina
98AG31]
Length = 516
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 27/163 (16%)
Query: 7 ERENKELNGGPPTGQV--RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHIT 64
E N ++ P TGQ+ +V+++G GVGKTS+V+ GS + TIG + K +
Sbjct: 270 EPSNGAISTNPQTGQLEAKVVILGMQGVGKTSIVHRYTTGSFSYSLASTIGASFCTKKL- 328
Query: 65 YGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTS 124
S+ G R +++WD +G ER++ + Y N I V+D++ + +
Sbjct: 329 ---------SVDGCKVR---LQIWDTAGQERFRSMAPMYYRGANAAILVYDITNQSSFED 376
Query: 125 LQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKE 167
+Q W E+ S S L ++G+KAD+A +
Sbjct: 377 IQNWLHEL--SANMSPELV----------IQIVGSKADLATDK 407
>gi|317575785|ref|NP_001187403.1| ras-related protein rab-7a [Ictalurus punctatus]
gi|308322921|gb|ADO28598.1| ras-related protein rab-7a [Ictalurus punctatus]
Length = 205
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 75/173 (43%), Gaps = 28/173 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKEVMV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ T +L W E + P
Sbjct: 56 LVTMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVTSPNTFKTLDSWRDEFLIQASPRDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+GNK D+ ++ T A+ W + + +P E
Sbjct: 116 --------ENFPFVVLGNKIDLENRQVTTKR-------AQAWCQSKNSIPYFE 153
>gi|38454238|ref|NP_942044.1| ras-related protein Rab-15 [Rattus norvegicus]
gi|464561|sp|P35289.1|RAB15_RAT RecName: Full=Ras-related protein Rab-15
gi|206537|gb|AAA41995.1| RAB15 [Rattus norvegicus]
gi|63102340|gb|AAH94954.1| RAB15, member RAS oncogene family [Rattus norvegicus]
gi|149051505|gb|EDM03678.1| rCG61451, isoform CRA_b [Rattus norvegicus]
Length = 212
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
R+L++GDSGVGKT L+ S TIG +K I + G R
Sbjct: 10 RLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTI----------EVDGIKVR- 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ERY+ Y + G+ V+D+S R+ + KW ++
Sbjct: 59 --IQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEY------- 109
Query: 143 ASGGPGGLPVPYVVIGNKADVAAK 166
P G V ++IGNKAD K
Sbjct: 110 ---APEG--VQKILIGNKADEEQK 128
>gi|320582172|gb|EFW96390.1| GTP-binding protein [Ogataea parapolymorpha DL-1]
Length = 206
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 21/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+ + G + TIG K + ++
Sbjct: 9 LKVIILGDSGVGKTSLMQQFINGKFSQQYKATIGADFLPKDLVI-------------DDK 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ ++ +LQ W E P
Sbjct: 56 QVTMQIWDTAGQERFQSLGVAFYRGSDCCVLVYDVTNTKSFENLQSWKDEFLIQANIKDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
P+VVIGNK DV
Sbjct: 116 --------DNFPFVVIGNKIDV 129
>gi|238914583|gb|ACR78134.1| predicted Rab7-like GTPase [Beauveria bassiana]
gi|346319897|gb|EGX89498.1| Ras-related protein Rab7 [Cordyceps militaris CM01]
gi|400600968|gb|EJP68636.1| Putative Rab7-like GTPase [Beauveria bassiana ARSEF 2860]
Length = 205
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+ V + TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMKQYVDKEFSASYKATIGADFSTKEVLV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E
Sbjct: 56 QVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFEALDSWRDEF--------- 106
Query: 142 LASGGPGGLP-VPYVVIGNKADV 163
L P P P+VVIGNK DV
Sbjct: 107 LIQASPRDPPNFPFVVIGNKIDV 129
>gi|406695666|gb|EKC98968.1| putative Ras-related protein Rab-18 [Trichosporon asahii var.
asahii CBS 8904]
Length = 222
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 111/257 (43%), Gaps = 43/257 (16%)
Query: 18 PTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKG 77
P +++L++G+S VGK+SL+ L F +T T+GV S++
Sbjct: 9 PPSNLKLLLIGNSSVGKSSLL-LRFTDDDFLSEEET-AATIGVDF--------KVKSVEV 58
Query: 78 DSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGT 137
D R + + +WD +G ER++ S Y GVI V+D+SQR T L KW EI T
Sbjct: 59 DGRR-YKLSIWDTAGQERFRTLTSSYYRGAQGVILVYDVSQRNTFDELIKWFREIE---T 114
Query: 138 FSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELP 197
+ A V +++GNK D R + + + RQ ++G
Sbjct: 115 YCAE---------DVVKIIVGNKVDKVTLVAMRRADESQ-EFTRQVTTEEG--------- 155
Query: 198 LTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAPNPWSISPTHKPIQRL 257
++F G + A+ + V F+ L+RR + P+ W+ P +P++
Sbjct: 156 --QAFADRMGTLFMECSAK-TRVGVNDAFQELVRRI-----LETPSLWTRGP--QPVRTP 205
Query: 258 DENSSDDDKFYSSGYSS 274
+ +D Y SG S
Sbjct: 206 NVQLQEDAPGYLSGCSC 222
>gi|402585290|gb|EJW79230.1| Ras family protein, partial [Wuchereria bancrofti]
Length = 225
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 20/144 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GD G GK+S IV+ + + +Q TVGV T S +++
Sbjct: 19 KILIIGDVGTGKSS----IVQRYAHNLFTQHYKATVGVDFATRTLLWSDGATLR------ 68
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDISG +R+ + + Y +G I V D +++ T +W ++ + T +
Sbjct: 69 --LQLWDISGQDRFSNMTRVYYKDAHGAIVVFDCTRQNTYDGALRWKSDLDSKITLAT-- 124
Query: 143 ASGGPGGLPVPYVVIGNKADVAAK 166
G P+P +++ NKAD+ K
Sbjct: 125 ------GKPLPCILVANKADLDNK 142
>gi|348680772|gb|EGZ20588.1| hypothetical protein PHYSODRAFT_465114 [Phytophthora sojae]
Length = 360
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 27/160 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGK++LV K QT+G K I G +R
Sbjct: 100 LKVVLIGDSGVGKSNLVMRFTKNKYMPHSVQTVGFEFATKTIRVG-------------DR 146
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++WD +G ER++ + Y G + V+D++ R + + W ++ S
Sbjct: 147 RLKAQIWDTAGQERFQSLTAAYYRNAVGAMIVYDITNRSSFEHVTGWLAQVHEHSHESLV 206
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAAR 181
L +++GNK D+A +R S ++AAR
Sbjct: 207 L------------ILVGNKCDLAHLPESREVS--TLEAAR 232
>gi|449671497|ref|XP_002157327.2| PREDICTED: ras-related protein Rab-27A-like [Hydra magnipapillata]
Length = 229
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
+++L +GDSGVGKT+ + G T+G K + Y G +++ K +
Sbjct: 15 IKLLALGDSGVGKTTFLYQYTDGKFIEEFISTVGIDFREKRVVY--HGKNADGTKQTRGQ 72
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ + + G + + DL+ + +++ W ++ T P
Sbjct: 73 RVHLQLWDTAGQERFRSLTTAFFRDAMGFLLIFDLAHEESFVNVRCWLSQLQTHAYCEDP 132
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDA 179
+ V++GNK+D+ + ++ L D+
Sbjct: 133 II-----------VLVGNKSDLDDRAVDESAARQLADS 159
>gi|367017049|ref|XP_003683023.1| hypothetical protein TDEL_0G04450 [Torulaspora delbrueckii]
gi|359750686|emb|CCE93812.1| hypothetical protein TDEL_0G04450 [Torulaspora delbrueckii]
Length = 208
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 70/142 (49%), Gaps = 20/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL++ V + SQ T+G +T + D ++
Sbjct: 9 LKVIILGDSGVGKTSLMHRYVN----DKYSQQYKATIGADFLT--------KEVVLDDDK 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ ++ +++ W E S+P
Sbjct: 57 VATMQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNVKSFENIKSWRDEFLVHANVSSP 116
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
P+V++GNK DV
Sbjct: 117 --------ETFPFVILGNKIDV 130
>gi|242055889|ref|XP_002457090.1| hypothetical protein SORBIDRAFT_03g001085 [Sorghum bicolor]
gi|241929065|gb|EES02210.1| hypothetical protein SORBIDRAFT_03g001085 [Sorghum bicolor]
Length = 239
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 78/181 (43%), Gaps = 27/181 (14%)
Query: 15 GGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNS 74
GG +RV+ G+ GVGKTSL+N V ++ TIG K +
Sbjct: 34 GGAGGIFLRVIFFGERGVGKTSLMNQYVNNRFSNQYKATIGADFLTKEVQI--------- 84
Query: 75 IKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIAT 134
+R F +++WD +G ER++ Y + + V+D++ ++ L W E
Sbjct: 85 ----DDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNNWREEFLI 140
Query: 135 SGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD-AARQWVEKQGLLPSS 193
+ S P P+VV+GNK DV G+S + + A+ W +G +P
Sbjct: 141 QASPSDP--------ENFPFVVLGNKIDVDG-----GNSRTVSEKKAKAWCASKGNIPYF 187
Query: 194 E 194
E
Sbjct: 188 E 188
>gi|9758338|dbj|BAB08894.1| Ras-related protein RAB7-like [Arabidopsis thaliana]
Length = 183
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 73/167 (43%), Gaps = 31/167 (18%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+++++++GDSGVGKTSL+ + TI + K I +E
Sbjct: 5 KLKIILLGDSGVGKTSLLKRYPHKDFKQLHNSTIYVDLVTKEICI-------------AE 51
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
R +++WD +G ER+K S Y + + V+D++ +T S+ W E
Sbjct: 52 RQVILQIWDTAGQERFKSLPSRFYRDTDCCVLVYDVNTLKTFESIDNWHDEFIKQANPET 111
Query: 141 PLASGGPGGLPVPYVVIGNKAD-------VAAKEGTR---GSSGNLV 177
P P+V++GNK D V AKE GS GN+V
Sbjct: 112 P--------TKFPFVLMGNKTDVNNGKPRVVAKEIADQWCGSKGNIV 150
>gi|91076370|ref|XP_967715.1| PREDICTED: similar to Ras-related protein Rab-27A (Rab-27)
(GTP-binding protein Ram) (Ram p25) [Tribolium
castaneum]
gi|270002552|gb|EEZ98999.1| hypothetical protein TcasGA2_TC004860 [Tribolium castaneum]
Length = 210
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 70/169 (41%), Gaps = 26/169 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++ L +GDSGVGKTS + G SR T+G K + Y S G +
Sbjct: 7 IKFLALGDSGVGKTSFLYQYTDGLFNSRFISTVGIDFREKRLLYQSKGRNHR-------- 58
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ + Y G + + DL+ ++ ++ W ++ P
Sbjct: 59 -VHLQLWDTAGQERFRSLTTAFYRDAMGFLLLFDLTNEQSFLEIRNWVEQLRLHAYCDCP 117
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLL 190
V+ GNKAD+ + AR+ EK GL+
Sbjct: 118 -----------DVVLCGNKADLEDRRIITEWR------AREMAEKLGLV 149
>gi|389742197|gb|EIM83384.1| hypothetical protein STEHIDRAFT_123821 [Stereum hirsutum FP-91666
SS1]
Length = 203
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 6 LKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMV-------------DDR 52
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 53 LVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFLIQASPHDP 112
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+GNK D+ +E R + A W + +G +P E
Sbjct: 113 --------ENFPFVVLGNKIDM--EENKRQVTQK---RAMTWCQSKGNIPYFE 152
>gi|225561783|gb|EEH10063.1| GTPase Rab7 [Ajellomyces capsulatus G186AR]
Length = 205
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 21/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V S TIG K + +R
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVNKKYSSSYKATIGADYLTKDVLV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 56 LVTLQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPRDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
+ P+VV+GNK DV
Sbjct: 116 ES--------FPFVVLGNKIDV 129
>gi|126282597|ref|XP_001369645.1| PREDICTED: ras-related protein Rab-15-like [Monodelphis domestica]
Length = 212
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 82/200 (41%), Gaps = 35/200 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
R+L++GDSGVGKT L+ S TIG +K I + G R
Sbjct: 10 RLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTI----------EVDGIKVR- 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ERY+ Y + G+ V+D+S R+ + KW ++
Sbjct: 59 --IQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEY------- 109
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGL----LPSSEELPL 198
P G V ++IGNKAD K G +Q ++ G+ + L +
Sbjct: 110 ---APEG--VQKILIGNKADEEQKRQVGKEQG------QQLAKEYGMDFFETSACTNLNI 158
Query: 199 TESFPGGGGLIAAAKEARYD 218
ESF L+ A + D
Sbjct: 159 KESFTRLTELVLQAHKKELD 178
>gi|403356117|gb|EJY77649.1| Small GTP-binding protein domain containing protein [Oxytricha
trifallax]
Length = 414
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 66/151 (43%), Gaps = 23/151 (15%)
Query: 17 PPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIK 76
P +++ VG+ VGK+ L+ + R TIG GVK + IK
Sbjct: 235 PEQVCFKIISVGNQEVGKSCLIKRYCEEKFVERYISTIGIDYGVKKL----------KIK 284
Query: 77 GDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
G S + +D+SG+E YK R+ Y +GV+ V DL R + SL W E+ +G
Sbjct: 285 GQS---IAINFFDMSGNEDYKQIRTEFYEGASGVMMVFDLDNRDSFNSLIHWEDEMKKNG 341
Query: 137 TFSAPLASGGPGGLPVPYVVIGNKADVAAKE 167
+ L VV GNK+D +E
Sbjct: 342 VDANRL----------KVVVCGNKSDSKGRE 362
>gi|8778652|gb|AAF79660.1|AC022314_1 F9C16.3 [Arabidopsis thaliana]
Length = 233
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 87/187 (46%), Gaps = 37/187 (19%)
Query: 16 GPPTGQ------VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYG--- 66
G +GQ +VL++GDSGVGK+SL+ L ++F S TIG VK++T G
Sbjct: 2 GSSSGQPEFDYLFKVLLIGDSGVGKSSLL-LSFTSNTFDDLSPTIGVDFKVKYLTIGEKK 60
Query: 67 ---------SSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLS 117
S S+++ G+ E + +G ER++ S Y G+I V+D++
Sbjct: 61 LKLAIWDTVSHCCLSSNVTGEEEESWICN----AGQERFRTLTSSYYRGAQGIIMVYDVT 116
Query: 118 QRRTKTSLQK-WAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNL 176
+R T T+L WA EI T + +++GNK D ++ G
Sbjct: 117 RRDTFTNLSDIWAKEIDLYSTNQDCIK-----------MLVGNKVDKESERAVSKKEG-- 163
Query: 177 VDAARQW 183
+D AR++
Sbjct: 164 IDFAREY 170
>gi|47221259|emb|CAG13195.1| unnamed protein product [Tetraodon nigroviridis]
Length = 288
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 37/217 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+GD GVGK+S++ V + +IG +K I + D +
Sbjct: 6 KVLVIGDLGVGKSSVILRYVNKRFVEKYKASIGVDFALKTIEW------------DPQTV 53
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++ WDI+G ER++ + Y GV+ V D ++R T + +W ++
Sbjct: 54 VRLQFWDIAGQERFRKMSRVYYKGAMGVLVVFDGTKRSTLEAASEWKRDLDGKVRLD--- 110
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGS-----------SGNLVDAARQWVEKQGLLP 191
GG P+P V++ NK D+ ++ S SG +A+ + +
Sbjct: 111 -----GGRPLPSVLLANKCDLKGRDRGDASWLNTFCEENSFSGCFETSAKDNIN----ID 161
Query: 192 SSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRM 228
+ + +T+ GGL A +E R D A MK F +
Sbjct: 162 EAVDFLVTQMMLRDGGL--ADEEDRNDSVAKMKKFNI 196
>gi|451851944|gb|EMD65242.1| hypothetical protein COCSADRAFT_36566 [Cochliobolus sativus ND90Pr]
gi|451995245|gb|EMD87713.1| hypothetical protein COCHEDRAFT_1023128 [Cochliobolus
heterostrophus C5]
Length = 205
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 21/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V + TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 56 LVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLVQASPMDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
+ P+VVIGNK DV
Sbjct: 116 ES--------FPFVVIGNKIDV 129
>gi|407922523|gb|EKG15620.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 205
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 21/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V + TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 56 LVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFDTLDSWRDEFLIQASPMDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
+ P+VVIGNK DV
Sbjct: 116 ES--------FPFVVIGNKIDV 129
>gi|396475893|ref|XP_003839885.1| similar to ras-related protein Rab-7a [Leptosphaeria maculans JN3]
gi|312216456|emb|CBX96406.1| similar to ras-related protein Rab-7a [Leptosphaeria maculans JN3]
Length = 205
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 21/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V + TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 56 LVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLVQASPMDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
+ P+VVIGNK DV
Sbjct: 116 ES--------FPFVVIGNKIDV 129
>gi|312065340|ref|XP_003135743.1| Ras family protein [Loa loa]
gi|307769102|gb|EFO28336.1| Ras family protein [Loa loa]
Length = 209
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 25/141 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GD GVGKT +V G+ R TIG +K + I+G +
Sbjct: 12 KIVLIGDMGVGKTCVVQRFKNGTFIERQGTTIGVDFSMKTLI----------IEGKRVK- 60
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD G ER++ Y NG++ +DL+ R++ SL +W +++ F+AP
Sbjct: 61 --LQIWDTGGQERFRTITQSYYRSANGILLCYDLTCRQSFESLHRWLDDVS---KFAAP- 114
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
V V+I KAD+
Sbjct: 115 --------NVCKVLIATKADL 127
>gi|302784056|ref|XP_002973800.1| rab family GTPase [Selaginella moellendorffii]
gi|302803686|ref|XP_002983596.1| rab family GTPase [Selaginella moellendorffii]
gi|300148839|gb|EFJ15497.1| rab family GTPase [Selaginella moellendorffii]
gi|300158132|gb|EFJ24755.1| rab family GTPase [Selaginella moellendorffii]
Length = 207
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++ +++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 9 LKAIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQV-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LVTMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLDNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
P++V+GNK DV G + +V A+ W +G +P E
Sbjct: 116 --------ENFPFIVLGNKVDV------DGGNSRVVSEKKAKAWCASKGNIPYFE 156
>gi|443703670|gb|ELU01105.1| hypothetical protein CAPTEDRAFT_94333 [Capitella teleta]
Length = 207
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
VR+++VGDS VGKT ++ +G T+G +KH ++G R
Sbjct: 9 VRLILVGDSSVGKTCMICRFAEGDVELPMGTTVGIDFKMKH----------TKVEGKRVR 58
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ERY Y + G++ V+D++ +T +LQKW +
Sbjct: 59 ---IQLWDTAGQERYDTITQQYYRRAQGILLVYDITNEKTFINLQKWV-------NYVQD 108
Query: 142 LASGGPGGLPVPYVVIGNKAD 162
A V +IGNK D
Sbjct: 109 YADD-----EVELTLIGNKCD 124
>gi|55925421|ref|NP_001007418.1| uncharacterized protein LOC492776 [Danio rerio]
gi|55249981|gb|AAH85368.1| Zgc:101559 [Danio rerio]
gi|182891720|gb|AAI65065.1| Zgc:101559 protein [Danio rerio]
Length = 233
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 29/151 (19%)
Query: 16 GPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSI 75
GP +++V+GDS VGKT L G S P TIG V + T G +I
Sbjct: 31 GPQARVFKIIVIGDSNVGKTCLTYRFCGGKFLSNPEATIG--VDFRERTLQLDGE---NI 85
Query: 76 KGDSERDFFVELWDISGHERYKDCRSIL---YSQINGVIFVHDLSQRRTKTSLQKWAVEI 132
K +++WD +G ER++ +S++ Y ++ +IFV+D++ + SL +W I
Sbjct: 86 K--------LQIWDTAGQERFR--KSMVEHYYRNVHAIIFVYDVTSLASFESLPEW---I 132
Query: 133 ATSGTFSAPLASGGPGGLPVPYVVIGNKADV 163
S P VP +++GNK D+
Sbjct: 133 EECNHHSVPPM--------VPRILVGNKCDL 155
>gi|148227658|ref|NP_001087958.1| RAB27A, member RAS oncogene family [Xenopus laevis]
gi|52078448|gb|AAH82420.1| LOC494641 protein [Xenopus laevis]
Length = 221
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 67/142 (47%), Gaps = 14/142 (9%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++ L +GDSGVGKTS + G S+ T+G K + Y S+G N+ +G +
Sbjct: 10 IKFLALGDSGVGKTSFLYQYTDGKFNSKFITTVGIDFREKRVVYRSNGPDGNTGRG---Q 66
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ + + G + + DL+ ++ +++ W ++ P
Sbjct: 67 RIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTSEQSFLNVRNWMSQLQVHAYCENP 126
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
V+ GNK+D+
Sbjct: 127 -----------DIVLCGNKSDL 137
>gi|358388492|gb|EHK26085.1| ras-related small GTPase [Trichoderma virens Gv29-8]
Length = 206
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 23/143 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V + TIG + + +R
Sbjct: 10 LKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLV-------------DDR 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E
Sbjct: 57 QVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEF--------- 107
Query: 142 LASGGPGGLP-VPYVVIGNKADV 163
L P P P+VV+GNK DV
Sbjct: 108 LIQASPRDPPNFPFVVLGNKIDV 130
>gi|307187848|gb|EFN72784.1| Ras-related protein Rab-27A [Camponotus floridanus]
Length = 208
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 16/167 (9%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
V+ L +G+SGVGKTS + G+ SR T+G K + Y ++ S +
Sbjct: 7 VKFLALGNSGVGKTSFLYQYTDGTFNSRFVSTVGIDFKEKRVIYQTANGRSQRVH----- 61
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ + Y G + + DL+ + ++ W ++ T P
Sbjct: 62 ---LQLWDTAGQERFRSLTTAFYRDSMGFLLIFDLTNELSFLEVRNWLEQLRTHAYCDDP 118
Query: 142 --LASGGPGGLPVPYVVIGNKA-DVAAKEG-----TRGSSGNLVDAA 180
+ G L V+ +KA D+A + G T ++G V+ A
Sbjct: 119 DIILCGNKSDLEDKRVISEHKARDLAERHGLVYLETSAATGQNVERA 165
>gi|169613615|ref|XP_001800224.1| hypothetical protein SNOG_09938 [Phaeosphaeria nodorum SN15]
gi|111061153|gb|EAT82273.1| hypothetical protein SNOG_09938 [Phaeosphaeria nodorum SN15]
Length = 205
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 21/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V + TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 56 LVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLVQASPMDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
+ P+VVIGNK DV
Sbjct: 116 ES--------FPFVVIGNKIDV 129
>gi|307777892|dbj|BAJ21342.1| Rab-family small GTPase RabX27 [Tetrahymena thermophila]
Length = 181
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 69/166 (41%), Gaps = 27/166 (16%)
Query: 12 ELNGGPP--TGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSG 69
+LN P + +VLV+GD GVGK+SL++ + + ++ TI K I
Sbjct: 7 KLNVSQPKEVKRFKVLVLGDGGVGKSSLLDRFINNTFDAKYRATIAIDYKNKTIDLPKES 66
Query: 70 SSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWA 129
N WD SGH + + R+ Y N ++ V D++ RR+ L W
Sbjct: 67 VQLN-------------FWDFSGHPEFYEVRNEFYKDANAILLVLDVTLRRSLDGLDMWL 113
Query: 130 VEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGN 175
E G +P VV+GNK D++ + + + N
Sbjct: 114 REAHEMGV------------QGIPTVVVGNKKDMSVRAVSENDAYN 147
>gi|154415318|ref|XP_001580684.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121914904|gb|EAY19698.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 191
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 28/143 (19%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGS-SFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
R++++GDS VGKTSLV + KG +RP+ V Y +G + KG +
Sbjct: 7 RLVMIGDSSVGKTSLVYQMCKGKWEETRPT--------VATAFYILNGDPA---KGQQD- 54
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ERY+ S+ Y G + V DL+ R++ +L W E
Sbjct: 55 ---IQIWDTAGAERYRALNSVYYHNAMGGLLVFDLTNRKSFEALPSWHEEF--------- 102
Query: 142 LASGGPGGLPVPYVVIGNKADVA 164
++ PG L V+IGNK+D+A
Sbjct: 103 VSLAQPGAL---LVLIGNKSDLA 122
>gi|348524949|ref|XP_003449985.1| PREDICTED: ras-related protein Rab-32-like isoform 1 [Oreochromis
niloticus]
Length = 213
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K I + DS+
Sbjct: 15 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVINW------------DSKTL 62
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + L
Sbjct: 63 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDVTRGSTFDAVSKWKHDLDS----KVKL 118
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
A+G P+P V++ NK D
Sbjct: 119 ANGN----PIPSVLLANKCD 134
>gi|398406058|ref|XP_003854495.1| ras-related protein-like protein [Zymoseptoria tritici IPO323]
gi|339474378|gb|EGP89471.1| ras-related protein-like protein [Zymoseptoria tritici IPO323]
Length = 205
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 21/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V + TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 56 LVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPMDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
+ P+VV+GNK DV
Sbjct: 116 ES--------FPFVVLGNKVDV 129
>gi|209150114|gb|ACI33008.1| Ras-related protein Rab-7a [Salmo salar]
Length = 205
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 75/173 (43%), Gaps = 28/173 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ T +L W E + P
Sbjct: 56 LVTMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+GNK D+ ++ T A+ W +G +P E
Sbjct: 116 --------ENFPFVVLGNKIDLENRQVT-------TKRAQAWCTSKGSIPYFE 153
>gi|344302658|gb|EGW32932.1| hypothetical protein SPAPADRAFT_60274 [Spathaspora passalidarum
NRRL Y-27907]
Length = 215
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 20/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+ V + TIG K I D+ +
Sbjct: 9 LKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEIII------------DNNK 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + D++ ++ +L W E S P
Sbjct: 57 PVTLQIWDTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSNP 116
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
P+++IGNK DV
Sbjct: 117 --------QDFPFIIIGNKIDV 130
>gi|242004508|ref|XP_002423125.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212506071|gb|EEB10387.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 210
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 70/141 (49%), Gaps = 25/141 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GD G GKT +V G+ R TIG +K++ + G +
Sbjct: 12 KIVLIGDCGAGKTCVVQRFKTGAFVERHGNTIGVDFSMKNVV----------VDGKKVK- 60
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y NGVI V+D+++R + SL++W E+ ++A
Sbjct: 61 --LQIWDTAGQERFRTITQSYYRSANGVIIVYDITKRSSFLSLERWIEEVR---RYAAT- 114
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
V V++GNK+D+
Sbjct: 115 --------NVLLVLVGNKSDL 127
>gi|301101818|ref|XP_002899997.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
gi|262102572|gb|EEY60624.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
Length = 311
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 85/175 (48%), Gaps = 32/175 (18%)
Query: 15 GGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNS 74
G PP +++++G+SGVGKT+L+ + KG ++ T+GV+ +T+ +
Sbjct: 111 GKPPAN--KIVLLGNSGVGKTNLIGRLHKGEY----NEEFTSTIGVEFLTH--------A 156
Query: 75 IKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIAT 134
+K D+ D ++WD +G ER+ S Y + G + V D+ R + +++W ++
Sbjct: 157 VKVDN-VDLKAQIWDTAGQERFHAMMSTYYRKAAGALLVFDVGNRASLLDVERWLDQL-- 213
Query: 135 SGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGL 189
L PG + ++GNK D+ A E R + + ARQ+ + +
Sbjct: 214 -------LNVAEPG---LHATLVGNKCDLPADE--RAVTA---EEARQFAAEHHM 253
>gi|221105634|ref|XP_002161676.1| PREDICTED: ras-related protein Rab-9B-like [Hydra magnipapillata]
Length = 209
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 28/173 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GD VGK++L+N V S+ TIG K + + GD+
Sbjct: 8 LKVIILGDGAVGKSALMNRFVNNKFDSQSFHTIGVEFLNKEV----------KVSGDT-- 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+ +++WD +G ER+K R+ Y + + V+ + ++ +L W E S P
Sbjct: 56 -YTLQIWDTAGQERFKSLRTPFYRGSDICLLVYAVDDEQSFYNLDMWKREFLYYADVSDP 114
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
+ P+VV+GNK D+ E T ++ A+ W + +G + E
Sbjct: 115 DS--------FPFVVLGNKLDLENHEVT-------LERAQTWCQAKGNMICFE 152
>gi|313213249|emb|CBY37091.1| unnamed protein product [Oikopleura dioica]
Length = 207
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 74/173 (42%), Gaps = 28/173 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V S+ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKRFSSQYKATIGADFLTKEVLV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D + T SL+ W E F
Sbjct: 56 MVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDTTAPNTFKSLESWGDE------FLIQ 109
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
+ P P+VVIGNK D+ + T A+ W + LP E
Sbjct: 110 ASPRDPDNF--PFVVIGNKIDLENRAVTPKR-------AQAWCAAKNDLPHFE 153
>gi|170027760|ref|XP_001841765.1| rab 19 [Culex quinquefasciatus]
gi|167862335|gb|EDS25718.1| rab 19 [Culex quinquefasciatus]
Length = 219
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 25/143 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GD G GKT +V G+ TIG +K +T + G +
Sbjct: 23 KIVLIGDCGTGKTCIVQRFKSGNFIESHGNTIGVDFSMKAVT----------VDGKKVK- 71
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y NGVI V+D+++R + +LQ+W E+ ++A
Sbjct: 72 --LQIWDTAGQERFRTITQSYYRSANGVIIVYDITKRSSFLNLQRWIDEVR---RYTAT- 125
Query: 143 ASGGPGGLPVPYVVIGNKADVAA 165
V V+GNK+D+ A
Sbjct: 126 --------NVMIFVVGNKSDLDA 140
>gi|397507196|ref|XP_003824091.1| PREDICTED: ras-related protein Rab-15 isoform 1 [Pan paniscus]
gi|27734452|sp|P59190.1|RAB15_HUMAN RecName: Full=Ras-related protein Rab-15
gi|119601301|gb|EAW80895.1| RAB15, member RAS onocogene family, isoform CRA_c [Homo sapiens]
gi|355390223|dbj|BAL14290.1| Ras-related protein Rab-15 isoform CN [Homo sapiens]
Length = 212
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
R+L++GDSGVGKT L+ S TIG +K I + G R
Sbjct: 10 RLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTI----------EVDGIKVR- 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ERY+ Y + G+ V+D+S R+ + KW + +
Sbjct: 59 --IQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWV----------SDV 106
Query: 143 ASGGPGGLPVPYVVIGNKADVAAK 166
P G V ++IGNKAD K
Sbjct: 107 DEYAPEG--VQKILIGNKADEEQK 128
>gi|444317893|ref|XP_004179604.1| hypothetical protein TBLA_0C02780 [Tetrapisispora blattae CBS 6284]
gi|387512645|emb|CCH60085.1| hypothetical protein TBLA_0C02780 [Tetrapisispora blattae CBS 6284]
Length = 220
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
Q +++++GDS VGK+S+VN VK S TIG + IT +K +
Sbjct: 3 QFKLVLLGDSSVGKSSIVNRFVKDSFDELRESTIGAAFLSQTIT----------LKNKTV 52
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
F E+WD +G ERYK + Y N + V+D+++ + Q W E+ +
Sbjct: 53 IKF--EIWDTAGQERYKSLAPMYYRNANAALVVYDITENDSLMKAQSWVDELKSK----- 105
Query: 141 PLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLL 190
G + ++GNK D+ ++ ++ L A+ + ++Q L+
Sbjct: 106 ------VGDENLVICLVGNKIDLCDEDESKRVV--LTKDAKDYADEQNLM 147
>gi|189199544|ref|XP_001936109.1| GTP-binding protein yptV5 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330921971|ref|XP_003299638.1| hypothetical protein PTT_10680 [Pyrenophora teres f. teres 0-1]
gi|187983208|gb|EDU48696.1| GTP-binding protein yptV5 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311326561|gb|EFQ92235.1| hypothetical protein PTT_10680 [Pyrenophora teres f. teres 0-1]
Length = 205
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 21/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V + TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 56 LVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLVQASPMDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
+ P+VVIGNK DV
Sbjct: 116 ES--------FPFVVIGNKIDV 129
>gi|402876447|ref|XP_003901979.1| PREDICTED: ras-related protein Rab-15 [Papio anubis]
gi|426377184|ref|XP_004055353.1| PREDICTED: ras-related protein Rab-15 isoform 1 [Gorilla gorilla
gorilla]
Length = 212
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
R+L++GDSGVGKT L+ S TIG +K I + G R
Sbjct: 10 RLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTI----------EVDGIKVR- 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ERY+ Y + G+ V+D+S R+ + KW + +
Sbjct: 59 --IQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWV----------SDV 106
Query: 143 ASGGPGGLPVPYVVIGNKADVAAK 166
P G V ++IGNKAD K
Sbjct: 107 DEYAPEG--VQKILIGNKADEEQK 128
>gi|405954307|gb|EKC21785.1| Ras-related protein Rab-7a [Crassostrea gigas]
gi|405961849|gb|EKC27591.1| Ras-related protein Rab-7a [Crassostrea gigas]
Length = 205
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 28/173 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V D++ T SL W E + P
Sbjct: 56 LVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTMPNTFKSLDSWRDEFLIQASPRDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VVIGNK D+ + T A+ W +G +P E
Sbjct: 116 --------ENFPFVVIGNKIDLENRAVT-------AKRAQSWCTSKGEIPYFE 153
>gi|392571674|gb|EIW64846.1| hypothetical protein TRAVEDRAFT_159540 [Trametes versicolor
FP-101664 SS1]
Length = 203
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 6 LKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMV-------------DDR 52
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 53 LVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDP 112
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+GNK D+ +E R + A W + +G +P E
Sbjct: 113 --------ENFPFVVLGNKIDM--EESKRQVTQK---RAMTWCQSKGNIPYFE 152
>gi|317418970|emb|CBN81008.1| Ras-related protein Rab-7a [Dicentrarchus labrax]
Length = 204
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 28/167 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++++++G SGVGK+S +N V R + TVG + S + +I+GD+
Sbjct: 10 LKIILIGSSGVGKSSFMNRYVN----HRFTNMYRATVGTDFL------SKTVTIEGDT-- 57
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ LY + + V D++ R + ++L+ W E G P
Sbjct: 58 -VTLQIWDTAGTERFQSLGMPLYRGAHCCMLVFDVTSRASFSALEGWRKEFLIQGEPEDP 116
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQG 188
P++V+GNK D++ +E SG A QW E+ G
Sbjct: 117 --------SDFPFIVLGNKTDLSDRE----VSGR---QALQWCEEIG 148
>gi|307182735|gb|EFN69859.1| Ras-related protein Rab-32 [Camponotus floridanus]
Length = 658
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 21/160 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+G+ G GKTS++ V TIG +K + + D
Sbjct: 456 KILVIGELGAGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNW------------DPHTI 503
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ +
Sbjct: 504 IRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSATLDAVVKWKQDLDSKVQL---- 559
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQ 182
P G P+P V++ NK D KEG S + + ++
Sbjct: 560 ----PDGSPIPCVLLANKCD-QQKEGLVNSPAKMDEYCKE 594
>gi|221123404|ref|XP_002154758.1| PREDICTED: ras-related protein Rab-22A-like [Hydra magnipapillata]
Length = 196
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 25/146 (17%)
Query: 18 PTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKG 77
P ++++ ++GDSGVGK+SLV V + + TIG + K I+ G
Sbjct: 5 PMREIKLCLLGDSGVGKSSLVLRFVTDRFDIQSTATIGASFMSKTISLG----------- 53
Query: 78 DSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGT 137
E + ++WD +G E+YK + Y I V+DL+ T S++ W E
Sbjct: 54 --ENSYKYQIWDTAGQEKYKSLAPMYYRGAAAAIVVYDLTVENTFKSVKTWVRE------ 105
Query: 138 FSAPLASGGPGGLPVPYVVIGNKADV 163
L GP GL + + GNK+D+
Sbjct: 106 ----LRELGPPGLVIA--IAGNKSDL 125
>gi|297790909|ref|XP_002863339.1| hypothetical protein ARALYDRAFT_494220 [Arabidopsis lyrata subsp.
lyrata]
gi|297309174|gb|EFH39598.1| hypothetical protein ARALYDRAFT_494220 [Arabidopsis lyrata subsp.
lyrata]
Length = 221
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 98/232 (42%), Gaps = 43/232 (18%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GDS VGK++L+ + + TIG + + I G ++
Sbjct: 16 KIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKM----------DING---KE 62
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++WD +G ER++ S Y G + V+D+S+R+T S+ +W E+ T
Sbjct: 63 IKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHT-------- 114
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTESF 202
+ V +++GNK+D+ + G + E QGL E+
Sbjct: 115 ----HSDMNVVTILVGNKSDLKDLREVSTAEG------KALAEAQGLF-------FMETS 157
Query: 203 PGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAPNPWSISPTHKPI 254
+AAA E V + + +L R+ S E+ +P S+S K +
Sbjct: 158 ALDSSNVAAAFET-----VVKEIYNILSRKVMSSQELNKQDPASLSNGKKVV 204
>gi|301095181|ref|XP_002896692.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
gi|262108831|gb|EEY66883.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
Length = 365
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 29/167 (17%)
Query: 17 PPTGQ--VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNS 74
PP + ++V+++GDSGVGK++LV K QT+G K I G
Sbjct: 90 PPITESILKVVLIGDSGVGKSNLVMRFTKNKYMPHSVQTVGFEFATKTIRVG-------- 141
Query: 75 IKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIAT 134
+R ++WD +G ER++ + Y G + V+D++ R + + W ++
Sbjct: 142 -----DRRLRAQIWDTAGQERFQSLTAAYYRNAVGAMIVYDITNRSSFEHVTGWLAQVHE 196
Query: 135 SGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAAR 181
S L +++GNK D+A +R S ++AAR
Sbjct: 197 HSHESLVL------------ILVGNKCDLAHLPESRQVS--TLEAAR 229
>gi|303736|dbj|BAA02109.1| GTP-binding protein [Pisum sativum]
gi|738934|prf||2001457B GTP-binding protein
Length = 222
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 36/182 (19%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+V+V+GDS VGKT +++ K TIG K +T + IK
Sbjct: 11 KVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTKTVTI-----NGKLIKA----- 60
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++WD +G ERY+ S Y G + V+D+++R+T + +W E L
Sbjct: 61 ---QIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEE----------L 107
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTESF 202
S G + + ++IGNK D+ + G + + A ++ E QGL S T +F
Sbjct: 108 RSHADGSIVI--MLIGNKGDLVDQRGVQ------TEDAVEFAEDQGLFFSE-----TSAF 154
Query: 203 PG 204
G
Sbjct: 155 SG 156
>gi|357132794|ref|XP_003568013.1| PREDICTED: ras-related protein Rab7-like [Brachypodium distachyon]
Length = 207
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 25/173 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + TIG K + +R
Sbjct: 10 LKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFLTKEVLI-------------EDR 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ +R+ +L W E S P
Sbjct: 57 LVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNAKRSFNTLGTWHDEFINQAGPSDP 116
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P++++GNK D A G+R A+ W +G +P E
Sbjct: 117 --------KHFPFILVGNKVDQDA--GSRRVVPE--KKAKDWCASKGNIPYFE 157
>gi|390469209|ref|XP_003734069.1| PREDICTED: ras-related protein Rab-15-like [Callithrix jacchus]
Length = 212
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
R+L++GDSGVGKT L+ S TIG +K I + G R
Sbjct: 10 RLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTI----------EVDGIKVR- 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ERY+ Y + G+ V+D+S R+ + KW + +
Sbjct: 59 --IQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWV----------SDV 106
Query: 143 ASGGPGGLPVPYVVIGNKADVAAK 166
P G V ++IGNKAD K
Sbjct: 107 DEYAPEG--VQKILIGNKADEEQK 128
>gi|281208325|gb|EFA82501.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 218
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 20/155 (12%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD VGKTS++ G TIG VK + + + + S
Sbjct: 15 KILVIGDYAVGKTSIIKRYCTGMFSPNYKLTIGVDFAVKEVQWDKNTTVS---------- 64
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+GHER+ + Y I V DL + T ++ KW +I ++ +
Sbjct: 65 --LQLWDIAGHERFGTMTRVYYKYAIAAIIVFDLGRPTTFEAVTKWRDDI------NSKV 116
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV 177
G P+P +++ NK D+ + N V
Sbjct: 117 VLGNQQ--PIPVLLLANKCDMKDSSIDKAMLDNFV 149
>gi|452843439|gb|EME45374.1| hypothetical protein DOTSEDRAFT_71187 [Dothistroma septosporum
NZE10]
Length = 205
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V + TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 56 LVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPMDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
+ P+VV+GNK DV +E R S A + + +G +P E
Sbjct: 116 ES--------FPFVVLGNKVDV--EESKRAISSK---RAMAFCQAKGGIPYFE 155
>gi|391336619|ref|XP_003742676.1| PREDICTED: ras-related protein Rab-7a-like [Metaseiulus
occidentalis]
Length = 207
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 33/186 (17%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKT L+N V ++ TIG K + + +
Sbjct: 9 LKVIVLGDSGVGKTCLMNQFVSKKFTNQYKATIGADFQTKEVMVDN-------------K 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ T SL+ W E S+P
Sbjct: 56 LITLQIWDTAGQERFQSLGVGFYRGADCCVLVYDVTSPTTFKSLESWRDEFLIQ---SSP 112
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLP-----SSEEL 196
P P+VVIGNK D+ + T A+ W + + +P + E L
Sbjct: 113 ---KDPENF--PFVVIGNKIDLENRSIT-------TKRAQSWCQSKNNIPYFEVSAKEAL 160
Query: 197 PLTESF 202
+ E+F
Sbjct: 161 HVDEAF 166
>gi|126326099|ref|XP_001363346.1| PREDICTED: ras-related protein Rab-18-like [Monodelphis domestica]
Length = 208
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
+++L++G+SGVGK+SL+ I + S TIG VK I++ + +
Sbjct: 9 LKILIIGESGVGKSSLLLRITDDTFDPNISATIGVDFKVKTISFDGNKAK---------- 58
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+ +WD +G ER++ Y GVI V+D+++R T L W +E+ T
Sbjct: 59 ---LAIWDTAGQERFRTLTPNYYRGAQGVILVYDVTRRDTFVKLDNWLIELNTHCM---- 111
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTR 170
G + +++GNK D E R
Sbjct: 112 -------GNDITKMLVGNKIDKENHEVDR 133
>gi|395504097|ref|XP_003756395.1| PREDICTED: ras-related protein Rab-15 [Sarcophilus harrisii]
Length = 212
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 82/200 (41%), Gaps = 35/200 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
R+L++GDSGVGKT L+ S TIG +K I + G R
Sbjct: 10 RLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTI----------EVDGIKVR- 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ERY+ Y + G+ V+D+S R+ + KW + +
Sbjct: 59 --IQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWV----------SDV 106
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGL----LPSSEELPL 198
P G V ++IGNKAD K G +Q ++ G+ + L +
Sbjct: 107 DEYAPEG--VQKILIGNKADEEQKRQVGREQG------QQLAKEYGMDFFETSACTNLNI 158
Query: 199 TESFPGGGGLIAAAKEARYD 218
ESF L+ A + D
Sbjct: 159 KESFTRLTELVLQAHKKELD 178
>gi|58260438|ref|XP_567629.1| RAB small monomeric GTPase [Cryptococcus neoformans var. neoformans
JEC21]
gi|134117371|ref|XP_772912.1| hypothetical protein CNBK2830 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|321264105|ref|XP_003196770.1| RAB small monomeric GTPase [Cryptococcus gattii WM276]
gi|50255530|gb|EAL18265.1| hypothetical protein CNBK2830 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229710|gb|AAW46112.1| RAB small monomeric GTPase, putative [Cryptococcus neoformans var.
neoformans JEC21]
gi|317463247|gb|ADV24983.1| RAB small monomeric GTPase, putative [Cryptococcus gattii WM276]
Length = 206
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKRFSTQYKATIGADFLTRELVV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 56 VVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSNKSFEALDGWRDEFLVQASPHDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+GNK D+ +E R S A W + +G +P E
Sbjct: 116 --------ENFPFVVLGNKIDM--EESKRMVSQK---RAMTWCQAKGNIPYFE 155
>gi|330792796|ref|XP_003284473.1| Rab GTPase [Dictyostelium purpureum]
gi|325085616|gb|EGC39020.1| Rab GTPase [Dictyostelium purpureum]
Length = 252
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 20/141 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VL++GD VGKTSL+ G TIG VK I + + S
Sbjct: 53 KVLLIGDYAVGKTSLIKRYCTGIFSPNYKLTIGVDFSVKDIEWEKNKVVS---------- 102
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+GHER+ + Y I V DLS+ T ++ KW ++ + +
Sbjct: 103 --LQLWDIAGHERFGTMTRVYYRYAIAAIIVFDLSRPSTFDAVTKWREDVNSKVVLA--- 157
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
P+P +++ NK+D+
Sbjct: 158 -----NQEPIPVLLLANKSDL 173
>gi|67466081|ref|XP_649196.1| small GTPase Rab7A [Entamoeba histolytica HM-1:IMSS]
gi|13537439|dbj|BAB40674.1| small GTPase Rab7A [Entamoeba histolytica]
gi|56465573|gb|EAL43810.1| small GTPase Rab7A [Entamoeba histolytica HM-1:IMSS]
gi|407041686|gb|EKE40891.1| small GTPase Rab7A, putative [Entamoeba nuttalli P19]
gi|449704349|gb|EMD44609.1| small GTPase Rab7A, putative [Entamoeba histolytica KU27]
Length = 206
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 28/174 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V S TIG K + +
Sbjct: 8 LKVIILGDSGVGKTSLMNQFVNHKYSSVYKATIGADFLTKDLVVDN-------------H 54
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+ +++WD +G+ER++ Y + +D++ +T SL W E
Sbjct: 55 EVTMQIWDTAGNERFQSLGVAFYRGADCCALCYDVNDPKTFESLNNWREEF--------- 105
Query: 142 LASGGPGGLP-VPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
L P P+VV+GNK D GS + A QW + +P E
Sbjct: 106 LVQASPKNQDQFPFVVLGNKVDT-----YEGSPDAIKKKAEQWCSEHFNIPFFE 154
>gi|405119344|gb|AFR94117.1| RAB small monomeric GTPase [Cryptococcus neoformans var. grubii
H99]
Length = 206
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKRFSTQYKATIGADFLTRELVV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 56 VVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSNKSFEALDGWRDEFLVQASPHDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+GNK D+ +E R S A W + +G +P E
Sbjct: 116 --------ENFPFVVLGNKIDM--EESKRMVSQK---RAMTWCQAKGNIPYFE 155
>gi|403264421|ref|XP_003924482.1| PREDICTED: ras-related protein Rab-15 [Saimiri boliviensis
boliviensis]
Length = 212
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
R+L++GDSGVGKT L+ S TIG +K I + G R
Sbjct: 10 RLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTI----------EVDGIKVR- 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ERY+ Y + G+ V+D+S R+ + KW + +
Sbjct: 59 --IQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWV----------SDV 106
Query: 143 ASGGPGGLPVPYVVIGNKADVAAK 166
P G V ++IGNKAD K
Sbjct: 107 DEYAPEG--VQKILIGNKADEEQK 128
>gi|340508734|gb|EGR34378.1| hypothetical protein IMG5_014070 [Ichthyophthirius multifiliis]
Length = 529
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 94/232 (40%), Gaps = 36/232 (15%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++++VGD+ VGKT L+ +K + + TIG K I IK
Sbjct: 16 KIVLVGDTNVGKTHLLKRFIKNNLACSVAPTIGVEFQAKTIQLKDGKI----IK------ 65
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
V+ WD +G ERY+ S Y + G + V+D+++ T S+QKW EI
Sbjct: 66 --VQFWDTAGQERYRSITSFHYRKALGALLVYDITKENTFNSVQKWIDEI---------- 113
Query: 143 ASGGPGGLPVPYVVIGNKADVAA-----KEGTRGSSGNLVDAARQWVEKQGLLPSSEELP 197
+ +++GNK D+ ++ ++ + N+ + + E+ L S+
Sbjct: 114 --KNQSSSDIIIMLVGNKLDLVQNNPSFRKVSKEDAKNISLEHKMFFEETSALTSNNVDQ 171
Query: 198 LTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAPNPWSISP 249
E L E +Y+ ++ I + F D++ +I+
Sbjct: 172 TFEKLLNVQNLQFQQLEQQYEN-------KLCILQLKFQDQIKESQELTINT 216
>gi|71022857|ref|XP_761658.1| hypothetical protein UM05511.1 [Ustilago maydis 521]
gi|46101135|gb|EAK86368.1| RAB7_NEUCR Probable Ras-related protein Rab7 [Ustilago maydis 521]
gi|343426390|emb|CBQ69920.1| probable GTPase Rab7 protein [Sporisorium reilianum SRZ2]
gi|388858528|emb|CCF47966.1| probable GTPase Rab7 protein [Ustilago hordei]
gi|443898215|dbj|GAC75552.1| NADH:ubiquinone oxidoreductase, NDUFV1/51kDa subunit [Pseudozyma
antarctica T-34]
Length = 205
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V S TIG + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKRFSSAYKATIGADFLTREVMV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + +D++ ++ +L W E F
Sbjct: 56 LVTMQLWDTAGQERFQSLGVAFYRGADCCCLCYDVNNAKSFETLDSWRDE------FLIQ 109
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
A P P+VV+GNK DV +E R S A W + +G +P E
Sbjct: 110 AAPHDPENF--PFVVLGNKIDV--EESKRMVSQK---RAMTWCQSKGNIPYFE 155
>gi|443697719|gb|ELT98053.1| hypothetical protein CAPTEDRAFT_110893 [Capitella teleta]
Length = 186
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 20/151 (13%)
Query: 17 PPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIK 76
P +VLV+G+ GVGKTS++ +G TIG +K I + +
Sbjct: 16 PKEYLFKVLVIGEFGVGKTSIIRRYTEGYFVPSYKMTIGVDFSMKSIPWNPMTHVN---- 71
Query: 77 GDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
++LWDI+GHER+ + Y I V DLS+ T ++ KW G
Sbjct: 72 --------IQLWDIAGHERFGHMTRVYYKYAMAAIVVFDLSRSSTLEAVSKW-----IEG 118
Query: 137 TFSAPLASGGPGGLPVPYVVIGNKADVAAKE 167
S + + P+P + NK D+ + E
Sbjct: 119 VRSKVMLTEDD---PIPCFLFANKCDIDSIE 146
>gi|261191069|ref|XP_002621943.1| GTPase Rab7 [Ajellomyces dermatitidis SLH14081]
gi|239590987|gb|EEQ73568.1| GTPase Rab7 [Ajellomyces dermatitidis SLH14081]
gi|239613100|gb|EEQ90087.1| GTPase Rab7 [Ajellomyces dermatitidis ER-3]
gi|327354859|gb|EGE83716.1| vacuolar biogenesis protein [Ajellomyces dermatitidis ATCC 18188]
Length = 205
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 21/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V S TIG K + +R
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVNKKYSSSYKATIGADYLTKDVLV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 56 LVTLQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPRDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
+ P+VV+GNK DV
Sbjct: 116 ES--------FPFVVLGNKIDV 129
>gi|432108510|gb|ELK33226.1| Ras-related protein Rab-38 [Myotis davidii]
Length = 211
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + S TIG +K + + D +
Sbjct: 11 KLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHW------------DPDTV 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + +
Sbjct: 59 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKNDLDSKLSL---- 114
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G PV V++ NK D
Sbjct: 115 ----PNGKPVSVVLLANKCD 130
>gi|15238115|ref|NP_199563.1| RAB GTPase homolog A5A [Arabidopsis thaliana]
gi|75333810|sp|Q9FGK5.1|RAA5A_ARATH RecName: Full=Ras-related protein RABA5a; Short=AtRABA5a
gi|9758780|dbj|BAB09078.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|28466933|gb|AAO44075.1| At5g47520 [Arabidopsis thaliana]
gi|62321645|dbj|BAD95258.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|110743839|dbj|BAE99754.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|332008145|gb|AED95528.1| RAB GTPase homolog A5A [Arabidopsis thaliana]
Length = 221
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 98/232 (42%), Gaps = 43/232 (18%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GDS VGK++L+ + + TIG + + I G ++
Sbjct: 16 KIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKM----------DING---KE 62
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++WD +G ER++ S Y G + V+D+S+R+T S+ +W E+ T
Sbjct: 63 IKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHT-------- 114
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTESF 202
+ V +++GNK+D+ + G + E QGL E+
Sbjct: 115 ----HSDMNVVTILVGNKSDLKDLREVSTAEG------KALAEAQGLF-------FMETS 157
Query: 203 PGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAPNPWSISPTHKPI 254
+AAA E V + + +L R+ S E+ +P S+S K +
Sbjct: 158 ALDSSNVAAAFET-----VVKEIYNILSRKVMSSQELNKQDPASLSNGKKVV 204
>gi|341890273|gb|EGT46208.1| hypothetical protein CAEBREN_29374 [Caenorhabditis brenneri]
Length = 210
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 25/158 (15%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++++VGD GVGKT +V G+ R TIG +K + +I G +
Sbjct: 12 KIVLVGDMGVGKTCVVQRFRSGNFVDRQGTTIGVDFTMKTL----------NIDGKRVK- 60
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD G ER++ Y NG++ +D++ +++ SLQ+W +++ F+AP
Sbjct: 61 --LQIWDTGGQERFRTITQSYYRSANGIVLCYDMTCKQSFGSLQRWIDDVS---KFAAP- 114
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAA 180
V ++IG K D+ + ++ A
Sbjct: 115 --------NVVKLLIGTKCDLEDQRAVEADEAEMLQRA 144
>gi|358392434|gb|EHK41838.1| hypothetical protein TRIATDRAFT_312376 [Trichoderma atroviride IMI
206040]
Length = 206
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 23/143 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V + TIG + + +R
Sbjct: 10 LKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLV-------------DDR 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E
Sbjct: 57 QVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEF--------- 107
Query: 142 LASGGPGGLP-VPYVVIGNKADV 163
L P P P+VV+GNK DV
Sbjct: 108 LIQASPRDPPNFPFVVLGNKIDV 130
>gi|168064632|ref|XP_001784264.1| Rab7/RabG-family small GTPase [Physcomitrella patens subsp. patens]
gi|162664184|gb|EDQ50913.1| Rab7/RabG-family small GTPase [Physcomitrella patens subsp. patens]
Length = 206
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 21/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQV-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ ++ +L+ W E + S P
Sbjct: 56 LVTMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLENWRDEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
P+VV+GNK DV
Sbjct: 116 --------DNFPFVVLGNKVDV 129
>gi|440295482|gb|ELP88395.1| rab9, putative [Entamoeba invadens IP1]
Length = 201
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 26/152 (17%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+G+ GKT +++ V + F R + T+GC K ITY +++
Sbjct: 32 IKVVVLGEMATGKTCILHRWV-TNEFVRQTATVGCAYSSKTITY-------------NKK 77
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
E+WD +G ERY+ SI Y + V+D+++ T +++ W E+ T
Sbjct: 78 LIKYEVWDAAGQERYRSLSSIYYRNATVALLVYDITRAETFSAVTDWVEELKTK------ 131
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSS 173
P + + +++GNK D+ + S
Sbjct: 132 ----APDNVMI--IIVGNKNDLETERAVNKES 157
>gi|340519278|gb|EGR49517.1| small GTPase of the Rab/Ypt family [Trichoderma reesei QM6a]
Length = 206
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 23/143 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V + TIG + + +R
Sbjct: 10 LKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLV-------------DDR 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E
Sbjct: 57 QVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFEALDSWRDEF--------- 107
Query: 142 LASGGPGGLP-VPYVVIGNKADV 163
L P P P+VV+GNK DV
Sbjct: 108 LIQASPRDPPNFPFVVLGNKIDV 130
>gi|149691929|ref|XP_001501079.1| PREDICTED: ras-related protein Rab-27A-like [Equus caballus]
Length = 221
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 29/203 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++ L +GDSGVGKTS++ G S+ T+G K + Y ++G +G +
Sbjct: 10 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGTVGRG---Q 66
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ + + G + + DL+ ++ +++ W ++ P
Sbjct: 67 RIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENP 126
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
V+ GNK+D+ + + + AR+ EK G +P E+
Sbjct: 127 -----------DIVLCGNKSDLEDQRVVKE------EEARELAEKYG-------IPYFET 162
Query: 202 FPGGGGLIAAAKEARYDKEAVMK 224
G I+ A E D +MK
Sbjct: 163 SAANGANISQAIEMLLD--LIMK 183
>gi|410916645|ref|XP_003971797.1| PREDICTED: ras-related protein Rab-32-like [Takifugu rubripes]
Length = 213
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K I + DS+
Sbjct: 15 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVINW------------DSKTL 62
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + L
Sbjct: 63 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDVTRGSTFEAVSKWKHDLDS----KVKL 118
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
A+G P+P V++ NK D
Sbjct: 119 ANGS----PIPSVLLANKCD 134
>gi|389750660|gb|EIM91733.1| ras-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 234
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 17/156 (10%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++++V+G+SGVGKTSL + G + TIG K + + + + +
Sbjct: 4 IKLVVIGNSGVGKTSLRGQYISGRFSTGYRATIGADFITKTLPHPT----------NPKE 53
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER+ S + + + ++D++Q + +L KW E T +AP
Sbjct: 54 TVTLQIWDTAGQERFSSLSSAFFRGADAALLMYDVNQPSSLRALDKWWDEFCT----NAP 109
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV 177
LA VV+GNK D+ +++G GSSG V
Sbjct: 110 LAEEDMEDYCC--VVVGNKMDLVSQQG-EGSSGPAV 142
>gi|403366976|gb|EJY83296.1| Ras-like protein Rab-11A [Oxytricha trifallax]
Length = 255
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 76/148 (51%), Gaps = 25/148 (16%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++++VGDSGVGK++L+ VK + F + QT T+GV+ T S I+G +
Sbjct: 15 KIVLVGDSGVGKSNLLMRFVK-NEFHQNMQT---TIGVEFST------KSMQIEGQLVK- 63
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++WD +G ERY+ Y G + ++D++ R++ +L+KW E+A + +
Sbjct: 64 --AQIWDTAGQERYRALTHAYYRNAVGALLIYDITDRQSFENLKKWQSELANHSEANTVM 121
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTR 170
+++GNK D++ + +
Sbjct: 122 ------------ILVGNKCDLSDQRAIK 137
>gi|168004225|ref|XP_001754812.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162693916|gb|EDQ80266.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 211
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 26/155 (16%)
Query: 14 NGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSN 73
+GG ++L++GDSGVGK+SL+ + +F S TIG VK +T G
Sbjct: 4 SGGEFDHLFKILLIGDSGVGKSSLL-VRFTADTFDDLSPTIGVDFKVKMMTLGG------ 56
Query: 74 SIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEI 132
+ + +WD +G ER++ S Y G+I V+D+S+R T T+L W E+
Sbjct: 57 -------KKLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVSRRATFTNLSDIWLKEV 109
Query: 133 ATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKE 167
T P + ++IGNK D+ E
Sbjct: 110 DRYST--------NPDCIK---MLIGNKVDLEEHE 133
>gi|46121525|ref|XP_385317.1| RAB7_NEUCR Probable Ras-related protein Rab7 [Gibberella zeae PH-1]
gi|302911601|ref|XP_003050527.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731464|gb|EEU44814.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|342879328|gb|EGU80581.1| hypothetical protein FOXB_08912 [Fusarium oxysporum Fo5176]
gi|408394017|gb|EKJ73273.1| hypothetical protein FPSE_06538 [Fusarium pseudograminearum CS3096]
Length = 205
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 23/143 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V + TIG + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E
Sbjct: 56 QVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFEALDSWRDEF--------- 106
Query: 142 LASGGPGGLP-VPYVVIGNKADV 163
L P P P+VV+GNK DV
Sbjct: 107 LIQASPRDPPNFPFVVLGNKIDV 129
>gi|395334162|gb|EJF66538.1| hypothetical protein DICSQDRAFT_130795 [Dichomitus squalens
LYAD-421 SS1]
Length = 203
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 6 LKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMV-------------DDR 52
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 53 LVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDP 112
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+GNK D+ +E R + A W + +G +P E
Sbjct: 113 --------ENFPFVVLGNKIDM--EESKRQVTQK---RAMTWCQSKGNIPYFE 152
>gi|348526868|ref|XP_003450941.1| PREDICTED: ras-related protein Rab-13-like [Oreochromis niloticus]
Length = 200
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 25/152 (16%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGKT L+ + + S TIG VK I + G +
Sbjct: 10 KLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTI----------EVDGKKVK- 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER+K + Y G+I V+D++ ++ ++Q W I +
Sbjct: 59 --LQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKEN------- 109
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSG 174
AS G V +++GNK D+ AK +G
Sbjct: 110 ASAG-----VSRMLLGNKCDIEAKRKVSKETG 136
>gi|403368408|gb|EJY84038.1| Rab7, RAB family GTPase [Oxytricha trifallax]
Length = 215
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 15/149 (10%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDS-- 79
++V+++GDS VGKTS++N VK TIG + I S S S G +
Sbjct: 40 LKVILLGDSSVGKTSIINQYVKKIFSDNLKPTIGVDFANQVIKKDDLKSRSTSCDGGTRY 99
Query: 80 ------ERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIA 133
E +++WD G E +K + Y ++GV+ V DL Q + L +W E
Sbjct: 100 AQGQYLEESIMLQIWDTMGQEMFKSINRMYYRGVHGVVLVCDLYQTVSLNHLNQWLQEFL 159
Query: 134 TSGTFSAPLASGGPGGLPVPYVVIGNKAD 162
SA + +V++ NK D
Sbjct: 160 QKQDRSANYS-------DFAFVLLANKCD 181
>gi|6942102|gb|AAF32317.1|AF218311_1 Rab7-like GTPase [Entamoeba histolytica]
Length = 206
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 28/174 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V S TIG K + +
Sbjct: 8 LKVIILGDSGVGKTSLMNQFVNHKYSSVYKATIGADFLTKDLVVDN-------------H 54
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+ +++WD +G+ER++ Y + +D++ +T SL W E
Sbjct: 55 EVTMQIWDTAGNERFQSLGVAFYRGADCCALCYDVNDPKTFESLNNWREEF--------- 105
Query: 142 LASGGPGGLP-VPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
L P P+VV+GNK D GS + A QW + +P E
Sbjct: 106 LVQASPKNQDQFPFVVLGNKVDT-----YEGSPDAIKKKAEQWCSEHFNIPFFE 154
>gi|313212632|emb|CBY36582.1| unnamed protein product [Oikopleura dioica]
Length = 207
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 74/173 (42%), Gaps = 28/173 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V S+ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKRFSSQYKATIGADFLTKEVLV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D + T SL+ W E F
Sbjct: 56 MVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDTTAPNTFKSLESWRDE------FLIQ 109
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
+ P P+VVIGNK D+ + T A+ W + LP E
Sbjct: 110 ASPRDPDNF--PFVVIGNKIDLENRAVTPKR-------AQAWCAAKNDLPHFE 153
>gi|432926809|ref|XP_004080935.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-18-like
[Oryzias latipes]
Length = 204
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 24/150 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
+++L++G+SGVGK+SL+ + + S TIG VK I S+ G+ +
Sbjct: 9 LKILIIGESGVGKSSLLLRFTEDTFDPEQSATIGVDFKVKTI----------SVDGNKAK 58
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+ +WD +G ER++ Y GVI V+D+++R T T L W E+ T T +
Sbjct: 59 ---LAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRETFTKLDNWLNELETYCTRN-- 113
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRG 171
+ +++GNK D + E R
Sbjct: 114 ---------DLVKMLVGNKIDKESHEVDRA 134
>gi|403361033|gb|EJY80212.1| Small GTP-binding protein domain containing protein [Oxytricha
trifallax]
Length = 332
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 66/151 (43%), Gaps = 23/151 (15%)
Query: 17 PPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIK 76
P +++ VG+ VGK+ L+ + R TIG GVK + IK
Sbjct: 153 PEQVCFKIISVGNQEVGKSCLIKRYCEEKFVERYISTIGIDYGVKKL----------KIK 202
Query: 77 GDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
G S + +D+SG+E YK R+ Y +GV+ V DL R + SL W E+ +G
Sbjct: 203 GQS---IAINFFDMSGNEDYKQIRTEFYEGASGVMMVFDLDNRDSFNSLIHWEDEMKKNG 259
Query: 137 TFSAPLASGGPGGLPVPYVVIGNKADVAAKE 167
+ L VV GNK+D +E
Sbjct: 260 VDANRL----------KVVVCGNKSDSKGRE 280
>gi|291397906|ref|XP_002715524.1| PREDICTED: RAB13, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 203
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 25/148 (16%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGKT L+ + S S TIG ++ + I+G +
Sbjct: 10 KLLLIGDSGVGKTCLIIRFAEDSFNSTYISTIGIDFKIRTV----------DIEG---KK 56
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER+K + Y G+I V+D++ ++ ++Q W I +
Sbjct: 57 IKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKEN------- 109
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTR 170
AS G V +++GNK D+ AK R
Sbjct: 110 ASAG-----VERLLLGNKCDMEAKRKVR 132
>gi|341903548|gb|EGT59483.1| CBN-GLO-1 protein [Caenorhabditis brenneri]
Length = 212
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 20/146 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+GD GVGKTS++ V S TIG +K + D
Sbjct: 13 KVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPV------------DENTV 60
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WDISG +RY + Y + I V D ++ RT +W ++ T +
Sbjct: 61 VHLQIWDISGQDRYGVMTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDLDQKVTLA--- 117
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEG 168
G PVP +++ NK D+ + G
Sbjct: 118 -----DGSPVPAILLANKCDIDNQLG 138
>gi|355561998|gb|EHH18630.1| hypothetical protein EGK_15275, partial [Macaca mulatta]
Length = 197
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 20/138 (14%)
Query: 25 LVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERDFF 84
LV+G+ GVGKTS++ V TIG +K + + DS
Sbjct: 1 LVIGELGVGKTSIIKRYVHQLFSQHYRSTIGVDFALKVLNW------------DSRTLVR 48
Query: 85 VELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPLAS 144
++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++ +
Sbjct: 49 LQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHL------ 102
Query: 145 GGPGGLPVPYVVIGNKAD 162
P G P+P V++ NK D
Sbjct: 103 --PNGSPIPAVLLANKCD 118
>gi|354465202|ref|XP_003495069.1| PREDICTED: ras-related protein Rab-27A-like [Cricetulus griseus]
gi|344243771|gb|EGV99874.1| Ras-related protein Rab-27A [Cricetulus griseus]
Length = 221
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 29/203 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++ L +GDSGVGKTS++ G S+ T+G K + Y ++G +G +
Sbjct: 10 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVGRG---Q 66
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ + + G + + DL+ ++ +++ W ++ P
Sbjct: 67 RIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENP 126
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
V+ GNK+D+ + + + AR+ EK G +P E+
Sbjct: 127 -----------DIVLCGNKSDLEDQRAVKE------EEARELAEKYG-------IPYFET 162
Query: 202 FPGGGGLIAAAKEARYDKEAVMK 224
G I+ A E D +MK
Sbjct: 163 SAANGTNISQAIEMLLD--LIMK 183
>gi|156096310|ref|XP_001614189.1| small GTPase rab11b [Plasmodium vivax Sal-1]
gi|148803063|gb|EDL44462.1| small GTPase rab11b, putative [Plasmodium vivax]
Length = 229
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 72/148 (48%), Gaps = 24/148 (16%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++++VGD+ VGKT L++ ++GS S TIG + I G+ +K
Sbjct: 11 KIILVGDATVGKTHLLSRYIRGSLPSVAKATIGVEFATRTIPLAVGGT----VKA----- 61
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++WD +G ERY+ S Y + G I V+D+++++T S+ KW EI +
Sbjct: 62 ---QIWDTAGQERYRSITSAHYRRSAGAILVYDVTKKKTFLSISKWLEEIRQN------- 111
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTR 170
+ +++GNK D+ + ++
Sbjct: 112 -----ADKDIVIMLVGNKVDLVEHDESK 134
>gi|327261967|ref|XP_003215798.1| PREDICTED: ras-related protein Rab-32-like [Anolis carolinensis]
Length = 235
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 20/150 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS
Sbjct: 37 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLPW------------DSRTL 84
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ +
Sbjct: 85 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDVTRGSTFEAVSKWKHDLDSKVLL---- 140
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGS 172
P G P+P V++ NK D G S
Sbjct: 141 ----PNGSPIPAVLLANKCDQKKDSGPNAS 166
>gi|123410458|ref|XP_001303710.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121885109|gb|EAX90780.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 199
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 25/145 (17%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
V+++++G+SGVGKTSL+N + GS+ P TIG ++ +TY D +
Sbjct: 12 VKLVILGNSGVGKTSLINQWINGSNLQNPKPTIGAVNHMQRLTY-----------DDQDV 60
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
D F+ WD +G E++ + N I V D+S + + + KW V+I + + P
Sbjct: 61 DLFI--WDTAGQEQFSSLAPLYVRSTNVGIVVADISDKESFNEVDKW-VDIVRTENPTLP 117
Query: 142 LASGGPGGLPVPYVVIGNKADVAAK 166
P V+ NK D+ +K
Sbjct: 118 -----------PLVLAINKIDLDSK 131
>gi|348535640|ref|XP_003455307.1| PREDICTED: ras-related protein Rab-27B-like [Oreochromis niloticus]
Length = 250
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 71/144 (49%), Gaps = 18/144 (12%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
+++L +GDSGVGKT+ + + + T+G K + Y +G + G +E+
Sbjct: 42 IKLLALGDSGVGKTTFLYRYTDNKFNRKFTTTVGIDFREKRVVYTGTG-----VDGATEK 96
Query: 82 DFFV--ELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFS 139
+F V +LWD +G ER++ + + G + + DL+ +++ +++ W ++ +
Sbjct: 97 NFRVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTNQQSFLNVRNWMSQLQANAYCE 156
Query: 140 APLASGGPGGLPVPYVVIGNKADV 163
+P V++G KADV
Sbjct: 157 SP-----------DVVLVGTKADV 169
>gi|312075015|ref|XP_003140228.1| Ras family protein [Loa loa]
gi|307764604|gb|EFO23838.1| Ras family protein [Loa loa]
Length = 239
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 20/144 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GD G GK+S IV+ + + +Q TVGV T S +++
Sbjct: 32 KILIIGDVGTGKSS----IVQRYAHNLFTQHYKATVGVDFATRTLLLSDGTTLR------ 81
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDISG +R+ + + Y +G I V D +++ T +W ++ + T +
Sbjct: 82 --LQLWDISGQDRFSNMTRVYYKDAHGAIVVFDCTRQNTYDGALRWKTDLDSKITLATE- 138
Query: 143 ASGGPGGLPVPYVVIGNKADVAAK 166
P+P +++ NKAD+ K
Sbjct: 139 -------KPLPSILVANKADLDNK 155
>gi|321466857|gb|EFX77850.1| hypothetical protein DAPPUDRAFT_231118 [Daphnia pulex]
Length = 224
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 68/141 (48%), Gaps = 14/141 (9%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+ L +G++GVGKTS + G S+ + T+G K + Y +S ++G S+R
Sbjct: 18 KFLALGNAGVGKTSFLYQYTDGVFNSKFTTTVGIDFREKRVVY--RAKNSEGMQGRSQR- 74
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWD +G ER++ + + G + + DL+ ++ S++ W ++ T P
Sbjct: 75 IHLQLWDTAGQERFRSLTTAFFRDSMGFLLLFDLTNEQSFLSIRSWLEQLKTHAYTDNP- 133
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
V+ GNKAD+
Sbjct: 134 ----------DIVLCGNKADL 144
>gi|126340875|ref|XP_001375267.1| PREDICTED: ras-related protein Rab-19-like [Monodelphis domestica]
Length = 217
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 86/210 (40%), Gaps = 46/210 (21%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GDS VGKT +V G TIG V+ S++ D ++
Sbjct: 19 KIILIGDSNVGKTCVVQHFKSGIYTDTQQNTIGVDFMVR------------SLEVDGKK- 65
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y N I +DL++R T S+ W EI G + +
Sbjct: 66 VKMQVWDTAGQERFRTITQSYYRSANAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVI 125
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTESF 202
++IGNKAD+ K L + A EK GLL E
Sbjct: 126 ------------MLIGNKADLWDKRHV------LFEDACTLAEKYGLLAVLE-------- 159
Query: 203 PGGGGLIAAAKEARYDKEAVMKFFRMLIRR 232
+AKE++ E M R LI R
Sbjct: 160 -------TSAKESKNIDEVFMLMARELIAR 182
>gi|4538902|emb|CAB39639.1| rab7-like protein [Arabidopsis thaliana]
gi|7267667|emb|CAB78095.1| rab7-like protein [Arabidopsis thaliana]
Length = 208
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 29/176 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLI--VKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDS 79
++V+V+GDSGVGKTSL+N V + TIG K + G
Sbjct: 9 LKVIVLGDSGVGKTSLMNHFRYVHKKFSMQYKATIGADFVTKELQIG------------- 55
Query: 80 ERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFS 139
E+ +++WD +G ER++ + Y + V+D++ R+ +L+ W E + S
Sbjct: 56 EKLVTLQIWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQASPS 115
Query: 140 APLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD-AARQWVEKQGLLPSSE 194
P P++V+GNK DV GSS + D A W G +P E
Sbjct: 116 DPKT--------FPFIVLGNKIDVDG-----GSSRVVSDKKAADWCASNGNIPYFE 158
>gi|13128964|ref|NP_076124.1| ras-related protein Rab-27A [Mus musculus]
gi|20178060|sp|Q9ERI2.1|RB27A_MOUSE RecName: Full=Ras-related protein Rab-27A
gi|10945661|gb|AAG24638.1| RAB27A [Mus musculus]
gi|12845770|dbj|BAB26891.1| unnamed protein product [Mus musculus]
gi|14198228|gb|AAH08173.1| Rab27a protein [Mus musculus]
gi|15054454|dbj|BAB62313.1| Rab27A [Mus musculus]
gi|16307138|gb|AAH09656.1| RAB27A, member RAS oncogene family [Mus musculus]
gi|26326523|dbj|BAC27005.1| unnamed protein product [Mus musculus]
gi|34850465|dbj|BAC87831.1| Rab27A [Mus musculus]
gi|112293013|dbj|BAF02884.1| Rab27A [Mus musculus]
gi|148694338|gb|EDL26285.1| RAB27A, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148694339|gb|EDL26286.1| RAB27A, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148694340|gb|EDL26287.1| RAB27A, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 221
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 29/203 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++ L +GDSGVGKTS++ G S+ T+G K + Y ++G +G +
Sbjct: 10 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVGRG---Q 66
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ + + G + + DL+ ++ +++ W ++ P
Sbjct: 67 RIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENP 126
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
V+ GNK+D+ + + + AR+ EK G +P E+
Sbjct: 127 -----------DIVLCGNKSDLEDQRAVKE------EEARELAEKYG-------IPYFET 162
Query: 202 FPGGGGLIAAAKEARYDKEAVMK 224
G I+ A E D +MK
Sbjct: 163 SAANGTNISHAIEMLLD--LIMK 183
>gi|392580232|gb|EIW73359.1| hypothetical protein TREMEDRAFT_42329 [Tremella mesenterica DSM
1558]
Length = 206
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKRFSTQYKATIGADFLTRELVV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ Y + + V+D++ ++ +L W E + P
Sbjct: 56 VVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSSKSFEALDGWRDEFLVQASPHDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+GNK D+ +E R S A W + +G +P E
Sbjct: 116 --------ENFPFVVLGNKIDM--EESKRMVSQK---RAMTWCQAKGNIPYFE 155
>gi|427778945|gb|JAA54924.1| Putative rab27a member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 264
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 17/142 (11%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++ L +GDSGVGKTS + + S+ T+G K ITY S G S+R
Sbjct: 47 IKFLALGDSGVGKTSFLYQYTNSTFNSKFISTVGIDFREKRITYRSPEGG-----GRSQR 101
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++LWD +G E+++ + + G + + DL+ ++ S++ W ++ T P
Sbjct: 102 -IYLQLWDTAGQEKFRSLTTAFFRDAMGFLVLFDLTSEQSFLSIRSWLEQLRTHAYCENP 160
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
V+ GNKAD+
Sbjct: 161 -----------DVVLCGNKADL 171
>gi|225718862|gb|ACO15277.1| Ras-related protein Rab-7a [Caligus clemensi]
gi|225719168|gb|ACO15430.1| Ras-related protein Rab-7a [Caligus clemensi]
Length = 205
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 75/173 (43%), Gaps = 28/173 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDQLVT---------- 58
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + +D++ + +SL+ W E + S P
Sbjct: 59 ---MQIWDTAGQERFQSLGVAFYRGADCCVLCYDVTDTNSFSSLESWRDEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+GNK D+ R S A+QW + +P E
Sbjct: 116 --------ENFPFVVLGNKVDLE----NRAVSSK---RAQQWCHSKNEVPYFE 153
>gi|15489394|gb|AAH13790.1| Rab15 protein [Mus musculus]
Length = 168
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
R+L++GDSGVGKT L+ S TIG +K I + G R
Sbjct: 10 RLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTI----------DVDGIKVR- 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ERY+ Y + G+ V+D+S R+ + KW + +
Sbjct: 59 --IQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWV----------SDV 106
Query: 143 ASGGPGGLPVPYVVIGNKADVAAK 166
P G V ++IGNKAD K
Sbjct: 107 DEYAPEG--VQKILIGNKADEEQK 128
>gi|268552453|ref|XP_002634209.1| C. briggsae CBR-RAB-19 protein [Caenorhabditis briggsae]
Length = 209
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 25/158 (15%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++++VGD GVGKT +V G+ R TIG +K + ++ G +
Sbjct: 12 KIVLVGDMGVGKTCVVQRFRSGNFVDRQGTTIGVDFTMKTL----------NVDGKRVK- 60
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD G ER++ Y NG++ +D++ +++ SLQ+W +++ F+AP
Sbjct: 61 --LQIWDTGGQERFRTITQSYYRSANGIVLCYDITCKQSFGSLQRWIDDVS---KFAAP- 114
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAA 180
V ++IG K D+ + L+ A
Sbjct: 115 --------NVAKLLIGTKCDLEDQRAIETEEAELLQRA 144
>gi|431904249|gb|ELK09646.1| Ras-related protein Rab-32 [Pteropus alecto]
Length = 215
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 64/139 (46%), Gaps = 20/139 (14%)
Query: 24 VLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERDF 83
VLV+G+ GVGKTS++ V TIG +K + + DS
Sbjct: 18 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------DSRTLV 65
Query: 84 FVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPLA 143
++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++ +
Sbjct: 66 RLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRGSTFEAVLKWKSDLDSKVHL----- 120
Query: 144 SGGPGGLPVPYVVIGNKAD 162
P G P+P V++ NK D
Sbjct: 121 ---PNGGPIPVVLLANKCD 136
>gi|291397122|ref|XP_002714910.1| PREDICTED: low-Mr GTP-binding protein Rab32-like [Oryctolagus
cuniculus]
Length = 230
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS
Sbjct: 32 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------DSRTL 79
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++ +
Sbjct: 80 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHL---- 135
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G +P V++ NK D
Sbjct: 136 ----PNGSAIPAVLLANKCD 151
>gi|116781187|gb|ABK21996.1| unknown [Picea sitchensis]
gi|116784353|gb|ABK23312.1| unknown [Picea sitchensis]
Length = 208
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 77/153 (50%), Gaps = 32/153 (20%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGK+SL+ L SF S TIG +K +T I G +
Sbjct: 15 KLLMIGDSGVGKSSLL-LRFTSDSFDDLSPTIGVDFKLKLMT----------IAGKRLK- 62
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEIATSGTFSAP 141
+ +WD +G ER++ S Y G+IFV+D+++R T T+L + WA E+
Sbjct: 63 --LTIWDTAGQERFRTLTSSYYRGAQGIIFVYDVTRRETFTNLSEVWAKEV--------D 112
Query: 142 LASGGPGGLPVPYVVIGNKAD------VAAKEG 168
L S + +++GNK D V+ KEG
Sbjct: 113 LYSTNQDCIK---MLVGNKVDRETERVVSKKEG 142
>gi|343172006|gb|AEL98707.1| Ras-like protein, partial [Silene latifolia]
Length = 110
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 15/111 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGK+SL+ L +F S TIG VK++ G +
Sbjct: 8 KLLMIGDSGVGKSSLL-LSFTSDTFEDLSPTIGVDFKVKYVNMGG-------------KK 53
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEI 132
+ +WD +G ER++ S Y G+I V+D+++R T T+L+ WA EI
Sbjct: 54 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLRDVWAKEI 104
>gi|198423784|ref|XP_002128753.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 206
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 41/201 (20%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ T +L W E + P
Sbjct: 56 LVTMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVTMPNTFKTLDSWRDEFLIQASPRDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAK-------EGTRGSSGNL------------VDAARQ 182
P+VVIGNK D+ + +G S ++ V+ A Q
Sbjct: 116 --------ENFPFVVIGNKIDLENRVVSYKRAQGWCHSKNDIPYFECSAKDNINVEQAFQ 167
Query: 183 WVEKQGLLPSSEELPLTESFP 203
V KQ L+ S+ L FP
Sbjct: 168 TVAKQALMQESDA-ELFNEFP 187
>gi|3914558|sp|Q41640.1|RAB7_VIGAC RecName: Full=Ras-related protein Rab7
gi|414842|gb|AAA34242.1| Rab7p [Vigna aconitifolia]
Length = 206
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 86/196 (43%), Gaps = 30/196 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GD+GVGKTSL+N V + SQ T+G +T ++ D +R
Sbjct: 9 LKVIVLGDTGVGKTSLMNQYVH----KKFSQQYKATIGADFVT--------KELQID-DR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + +D++ ++ +L W E
Sbjct: 56 LVTLQIWDTAGQERFQSLGVAFYRGADCCVLAYDVNVMKSFDTLDNWHEEFLKQ------ 109
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSEELPLT 199
+ P P++++GNK D+ G + +V A+ W +G +P E
Sbjct: 110 --ANPPDPRSFPFILLGNKIDI------DGGNSRVVSEKKAKDWCASKGNIPYFET-SAK 160
Query: 200 ESFPGGGGLIAAAKEA 215
E F + AK A
Sbjct: 161 EDFNVDAAFLCIAKAA 176
>gi|339247021|ref|XP_003375144.1| Ras-related protein Rab-32 [Trichinella spiralis]
gi|316971523|gb|EFV55281.1| Ras-related protein Rab-32 [Trichinella spiralis]
Length = 247
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 20/147 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GKTS++ V S+ TIG +K I + S+ S++
Sbjct: 37 KILVIGDICTGKTSIIRRYVHNLFSSQYQATIGVDFAMK-IFHCSNSSTAR--------- 86
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++ WDI+G ER+ + Y G I V D+S+ T + +W ++ + S
Sbjct: 87 --LQFWDIAGQERFSSMTRVYYRGAAGAIIVFDVSRASTLDGVTRWKKDLDSKCRLS--- 141
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGT 169
G+P+P V++ NK+D+ T
Sbjct: 142 -----NGMPIPAVLLANKSDLLKHYAT 163
>gi|159024328|gb|ABW87378.1| small GTP-binding protein Rab4 [Aiptasia pulchella]
Length = 217
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 25/143 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+ LV+G +G GK+ +++ ++G S TIG G K I G S+K
Sbjct: 10 KFLVIGSAGTGKSCILHQFIEGKFKQDSSHTIGVEFGSKIINVGG-----KSVK------ 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y G + V+D+S R T SL W + + T ++P
Sbjct: 59 --LQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRETFNSLTNW---LTDARTLASP- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVAA 165
+ +++GNK D+ A
Sbjct: 113 --------NIVIILVGNKKDLDA 127
>gi|167378043|ref|XP_001734647.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165903767|gb|EDR29200.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 206
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 28/174 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V S TIG K + +
Sbjct: 8 LKVIILGDSGVGKTSLMNQFVNHKYSSVYKATIGADFLTKDLVVDN-------------H 54
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+ +++WD +G+ER++ Y + +D++ +T SL W E
Sbjct: 55 EVTMQIWDTAGNERFQSLGVAFYRGADCCALCYDVNDPKTFESLNNWREEF--------- 105
Query: 142 LASGGPGGLP-VPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
L P P+VV+GNK D GS + A QW + +P E
Sbjct: 106 LVQASPKNQDQFPFVVLGNKVDT-----YEGSPDAIKKKAEQWCSEHFNIPFFE 154
>gi|399932055|gb|AFP57563.1| Ras-related protein Rab-7a [Latrodectus hesperus]
Length = 206
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 23/143 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N+ V ++ TIG + + ++R
Sbjct: 9 LKVIILGDSGVGKTSLMNMYVNKRFSNQYKATIGADFLTREVQV-------------NDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ + + + V+D++ + SL W F
Sbjct: 56 LVTMQIWDTAGQERFQSLGHAFFRGADCCVLVYDVTSPTSFKSLDNW---------FDEF 106
Query: 142 LASGGPGG-LPVPYVVIGNKADV 163
+ GP P+VVIGNK D+
Sbjct: 107 MVQSGPRNPEEFPFVVIGNKIDL 129
>gi|297825041|ref|XP_002880403.1| hypothetical protein ARALYDRAFT_481052 [Arabidopsis lyrata subsp.
lyrata]
gi|297326242|gb|EFH56662.1| hypothetical protein ARALYDRAFT_481052 [Arabidopsis lyrata subsp.
lyrata]
Length = 211
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 35/202 (17%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + TIG K + E+
Sbjct: 10 LKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHI-------------DEK 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ + Y + + V+D++ ++ +L W E P
Sbjct: 57 PVTLQIWDTAGQERFQSLGAAFYRGADCCVLVYDVNNLKSFETLNNWHTEFLKQANPMEP 116
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAAR--QWVEKQGLL-----PSSE 194
P+V+IGNK DV G + +V R +W +G + + +
Sbjct: 117 DT--------FPFVLIGNKTDV------DGGNSRVVSNKRAIEWCGSKGNILYHETSAKD 162
Query: 195 ELPLTESFPGGGGLIAAAKEAR 216
+ + E+F G IA A E +
Sbjct: 163 DTNVDEAFLGVAH-IALANERK 183
>gi|308803965|ref|XP_003079295.1| putative GTP-binding protein RAB1Y (ISS) [Ostreococcus tauri]
gi|116057750|emb|CAL53953.1| putative GTP-binding protein RAB1Y (ISS) [Ostreococcus tauri]
Length = 204
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 26/148 (17%)
Query: 16 GPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSI 75
P V++L+VGDSGVGK+S+V V SF S T+G +K +
Sbjct: 6 APYDHLVKILLVGDSGVGKSSIVTRFVS-DSFEELSPTVGVDFKLKRLDV---------- 54
Query: 76 KGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEIAT 134
D +R + +WD +G ER++ S Y +GV+FV+D++ + +L++ W E+
Sbjct: 55 --DGKR-LKLTVWDTAGQERFRTLTSSYYRGAHGVVFVYDVTSAASFAALRETWLKEVDM 111
Query: 135 SGTFSAPLASGGPGGLPVPYVVIGNKAD 162
GT + + +VIGNK D
Sbjct: 112 YGTIESSVK-----------IVIGNKID 128
>gi|148233848|ref|NP_001085684.1| MGC80435 protein [Xenopus laevis]
gi|49118197|gb|AAH73193.1| MGC80435 protein [Xenopus laevis]
Length = 204
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGDS VGKTSL+ V T+G +K + + S + +++
Sbjct: 9 KVLVVGDSTVGKTSLLQRYVHDVFGKDYKMTMGVDFALKVVQW----SDAETVR------ 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y Q + + + DL+ + + Q W ++ T
Sbjct: 59 --LQLWDIAGQERFASMTRLYYKQASACVIMFDLTNAESFRNCQMWKDDLDNKVTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G VP +++ NK D++
Sbjct: 113 ----PNGDFVPCILLANKCDLS 130
>gi|221058599|ref|XP_002259945.1| GTP-binding protein [Plasmodium knowlesi strain H]
gi|193810018|emb|CAQ41212.1| GTP-binding protein, putative [Plasmodium knowlesi strain H]
Length = 229
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 24/141 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++++VGD+ VGKT L++ ++GS S TIG + I G+ +K
Sbjct: 11 KIILVGDATVGKTHLLSRYIRGSLPSVAKATIGVEFATRTIPLAIGGT----VKA----- 61
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++WD +G ERY+ S Y + G I V+D+++++T S+ KW EI +
Sbjct: 62 ---QIWDTAGQERYRSITSAHYRRSAGAILVYDVTKKKTFLSISKWLEEIRQN------- 111
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
+ +++GNK D+
Sbjct: 112 -----ADKDIVIMLVGNKVDL 127
>gi|75750517|ref|NP_001028764.1| uncharacterized protein LOC619200 [Danio rerio]
gi|241982765|ref|NP_001155979.1| ras-related protein Rab-33B [Danio rerio]
gi|71681216|gb|AAI00132.1| Zgc:114080 [Danio rerio]
Length = 239
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 42/188 (22%)
Query: 17 PPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIK 76
P T +++V+GDSGVGKT L G + TIG K I I
Sbjct: 22 PRTRIFKIIVIGDSGVGKTCLTYRFCAGKFPDKTEATIGVDFREKVI----------EID 71
Query: 77 GDSERDFFVELWDISGHERYKDCRSIL---YSQINGVIFVHDLSQRRTKTSLQKWAVEIA 133
G+ + V+LWD +G ER++ +S++ Y ++ V+FV+D++ + SL W E
Sbjct: 72 GEKIK---VQLWDTAGQERFR--KSMVQHYYRNVHAVVFVYDVTNAASFRSLPAWIEECR 126
Query: 134 TSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSS 193
G VP +++GNK D+ R ++ D A+Q+ + +
Sbjct: 127 QHAL-----------GQEVPRILVGNKCDL------RHAAQVSTDVAQQFAD-------T 162
Query: 194 EELPLTES 201
+PL E+
Sbjct: 163 HSMPLFET 170
>gi|156543352|ref|XP_001607917.1| PREDICTED: ras-related protein Rab-7a-like isoform 1 [Nasonia
vitripennis]
gi|156543354|ref|XP_001607924.1| PREDICTED: ras-related protein Rab-7a-like isoform 2 [Nasonia
vitripennis]
Length = 207
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 76/173 (43%), Gaps = 28/173 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V D++ T SL W E F
Sbjct: 56 IVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVAAPSTFKSLDSWRDE------FLIQ 109
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
+ P P+VV+GNK D+ E SS A+QW + + +P E
Sbjct: 110 ASPRDPDNF--PFVVLGNKVDL---ENRAVSSKR----AQQWCQSKNNIPYFE 153
>gi|328778015|ref|XP_001122603.2| PREDICTED: hypothetical protein LOC726887 [Apis mellifera]
Length = 637
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 21/146 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+G+ G GKTS++ V TIG +K + + D
Sbjct: 435 KILVIGELGAGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNW------------DPHTI 482
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ +
Sbjct: 483 IRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSATLDAVVKWKQDLDSKVQL---- 538
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEG 168
P G P+P V++ NK D KEG
Sbjct: 539 ----PDGSPIPCVLLANKCD-QQKEG 559
>gi|407039992|gb|EKE39928.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 195
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 32/171 (18%)
Query: 17 PPTGQ---VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSN 73
PP G+ V+++VVGDSGVGKT++++ + S TIG V VK +
Sbjct: 6 PPIGRKKPVKIIVVGDSGVGKTAIISKFLYKDVNKNESATIG-NVHVKTVLE-------- 56
Query: 74 SIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIA 133
KG+S+ D V +WD +G E+Y I + G + V+D++ ++ W +
Sbjct: 57 --KGNSKLD--VAIWDTAGQEKYSSMVDIFFRGAKGCVIVYDITSFQSFVDTTSWYTSV- 111
Query: 134 TSGTFSAPLASGGPGGLPVPYVVIGNKADVAA-KEGTRGSSGNLVDAARQW 183
F S +P V++GNK D+++ +E S+ NL A +W
Sbjct: 112 ----FDITHTS-------IPIVLVGNKKDLSSQREVAYESAENL---AVKW 148
>gi|115752504|ref|XP_001178826.1| PREDICTED: ras-related protein Rab-33B-like [Strongylocentrotus
purpuratus]
Length = 236
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 29/148 (19%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++V+GDS VGKT L G + TIG K++T I+G++ +
Sbjct: 25 KIIVIGDSNVGKTCLTYRFCGGEFPEKTEATIGVDFREKNVT----------IEGETVK- 73
Query: 83 FFVELWDISGHERYKDCRSIL---YSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFS 139
++LWD +G ER++ +S++ Y ++ VIFV+D+++ T SL W E
Sbjct: 74 --LQLWDTAGQERFR--KSMVQHYYRNVHAVIFVYDVTKMSTFESLPTWIDE-------- 121
Query: 140 APLASGGPGGLPVPYVVIGNKADVAAKE 167
S P P V++GNK D+A ++
Sbjct: 122 CDRHSLSPD---TPRVLVGNKCDMADRK 146
>gi|124088024|ref|XP_001346935.1| Ras-related RAB [Paramecium tetraurelia strain d4-2]
gi|145474741|ref|XP_001423393.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|50057324|emb|CAH03308.1| Ras-related RAB, putative [Paramecium tetraurelia]
gi|74831386|emb|CAI39294.1| rab_C65 [Paramecium tetraurelia]
gi|124390453|emb|CAK55995.1| unnamed protein product [Paramecium tetraurelia]
Length = 210
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 75/145 (51%), Gaps = 25/145 (17%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKT+L+ V +FS ++ T+GV+ T SIK + +
Sbjct: 9 LKVIVIGDSGVGKTNLLLRFV-NHTFSNDLKS---TIGVQFFT------KVISIKNEHIK 58
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ERY+ + Y +GVI DL+ + + ++ KW E+ F+
Sbjct: 59 ---LQLWDTAGQERYRSISNSYYKGSHGVIICFDLTHQESLDNVVKWYEEVKQQADFN-- 113
Query: 142 LASGGPGGLPVPYVVIGNKADVAAK 166
V ++IGNK D++ +
Sbjct: 114 ----------VKIILIGNKLDLSQQ 128
>gi|410905643|ref|XP_003966301.1| PREDICTED: ras-related protein Rab-13-like [Takifugu rubripes]
Length = 200
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 25/152 (16%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGKT L+ + + S TIG VK I + G +
Sbjct: 10 KLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTI----------DVDGKKVK- 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER+K + Y G+I V+D++ ++ ++Q W I +
Sbjct: 59 --LQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKEN------- 109
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSG 174
AS G V +++GNK D+ AK +G
Sbjct: 110 ASAG-----VSRMLLGNKCDIEAKRKVSKETG 136
>gi|178056544|ref|NP_001116648.1| ras-related protein Rab-32 [Sus scrofa]
gi|122131882|sp|Q06AU5.1|RAB32_PIG RecName: Full=Ras-related protein Rab-32
gi|115394762|gb|ABI97175.1| RAB32 [Sus scrofa]
Length = 226
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS
Sbjct: 29 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------DSRTL 76
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G + V D+S+ ++ KW ++ +
Sbjct: 77 VRLQLWDIAGQERFGNMTRVYYKEAVGALVVFDISRGSPFEAVLKWKNDLDSKVHL---- 132
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G P+P V++ NK D
Sbjct: 133 ----PNGSPIPAVLLANKCD 148
>gi|432850525|ref|XP_004066796.1| PREDICTED: ras-related protein Rab-9A-like [Oryzias latipes]
Length = 200
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GD GVGK+SL+N V S TIG K + + G R
Sbjct: 7 LKVILLGDGGVGKSSLMNRYVTNKFDSHLFHTIGVEFLNKEL----------EVDG---R 53
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ R+ Y + + L ++ ++L W E +F A
Sbjct: 54 RVTLQIWDTAGQERFRSLRTPFYRGSDCCLLTFSLDDGQSFSNLANWKKEF----SFYAD 109
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
+ P++V+GNK DV R SG + ARQW + G LP E
Sbjct: 110 VKDAD----HFPFLVLGNKLDVP----QRQVSG---EDARQWCRENGGLPYFE 151
>gi|358344494|ref|XP_003636324.1| Ras-related protein Rab7 [Medicago truncatula]
gi|355502259|gb|AES83462.1| Ras-related protein Rab7 [Medicago truncatula]
Length = 209
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 35/190 (18%)
Query: 22 VRVLVVGDSGVGKTSLVN---LIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGD 78
++V+V+GDSGVGKTSL+N L V + SQ T+G +T ++ D
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYPLYVH----KKFSQQYKATIGADFVT--------KELQID 56
Query: 79 SERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTF 138
+R +++WD +G ER++ Y + + V+D++ ++ +L W E
Sbjct: 57 -DRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANP 115
Query: 139 SAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD-AARQWVEKQGLLP-----S 192
S P P++++GNK D+ G+S + D A+ W +G +P +
Sbjct: 116 SNPST--------FPFILLGNKVDIDG-----GNSRVVSDKKAKDWCASKGNVPYFETSA 162
Query: 193 SEELPLTESF 202
E+L + +F
Sbjct: 163 KEDLNVDAAF 172
>gi|345568482|gb|EGX51376.1| hypothetical protein AOL_s00054g446 [Arthrobotrys oligospora ATCC
24927]
Length = 216
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 23/144 (15%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+++V+++GDSGVGKTSL+N V + TIG K + +
Sbjct: 17 KLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLV-------------DD 63
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
R +++WD +G ER++ Y + + V+D++ +++ +L W E
Sbjct: 64 RLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNNQKSFETLDSWRDEF-------- 115
Query: 141 PLASGGP-GGLPVPYVVIGNKADV 163
L P P+VVIGNK DV
Sbjct: 116 -LIQASPRDADSFPFVVIGNKIDV 138
>gi|123418671|ref|XP_001305382.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121886897|gb|EAX92452.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 195
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 31/172 (18%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
RV+VVGD+ VGKTSL+N ++ S + T+G Y + +K +
Sbjct: 9 HCRVVVVGDASVGKTSLLNQLIDHSYNAYEQSTVGAN-------YQLFVQEIDGVKVE-- 59
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
+++WD +G E++K I + G + V D++ R++ + L +W +FS
Sbjct: 60 ----IQIWDTAGQEKFKSLGPIYFRNSLGCVAVFDITNRQSYSDLPEWI------DSFSQ 109
Query: 141 PLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPS 192
GP + V GNKAD+ E +R D A++W EK G L S
Sbjct: 110 V---AGPETI---IAVAGNKADL---EDSRQV---FADEAKEWAEKNGYLFS 149
>gi|357017283|gb|AET50670.1| hypothetical protein [Eimeria tenella]
Length = 207
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 25/160 (15%)
Query: 17 PPTGQ--VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNS 74
PP + ++V+++GDS VGKTSL+N V ++ TIG K +
Sbjct: 2 PPKKKSLLKVIILGDSSVGKTSLMNQYVNKKFSNQYKATIGADFLTKDVVI--------- 52
Query: 75 IKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIAT 134
+++ +++WD +G ER++ Y + + V D++ ++ SL+ W E
Sbjct: 53 ----DDKEVTIQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTNPKSFDSLESWKDEFLI 108
Query: 135 SGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSG 174
+ + P A P+VV+GNK D KE R S+
Sbjct: 109 QSSPADPDA--------FPFVVLGNKVD--EKEKRRVSAA 138
>gi|126328814|ref|XP_001373156.1| PREDICTED: ras-related protein Rab-39A-like [Monodelphis domestica]
Length = 219
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 21/154 (13%)
Query: 10 NKELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSG 69
+E Q R+L++GD+ VGKTSL+ ++G + P + TVGV+ +
Sbjct: 2 TREYQLASSQHQFRILLLGDADVGKTSLLQRYIEGDFGADPPPS--STVGVEFYSRMLQL 59
Query: 70 SSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWA 129
+S IK ++ WD +G ERY+ Y GV+ V D++ R++ ++ W
Sbjct: 60 ASGPRIK--------LQFWDTAGDERYRSITRSFYRNTVGVLLVFDVTNRKSFNHVEDWY 111
Query: 130 VEIATSGTFSAPLASGGPGGLPVPYVVIGNKADV 163
E+A+ G V ++++G+K D+
Sbjct: 112 QEVASV-----------QGSDKVVFLLVGHKCDL 134
>gi|405968188|gb|EKC33284.1| Ras-related protein RHA1 [Crassostrea gigas]
Length = 483
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 71/146 (48%), Gaps = 25/146 (17%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+V+V+GD VGKT++ + K + + T+G + ++ S I+G
Sbjct: 13 RVKVVVIGDMCVGKTAIAHRFTKNAFEEKLPHTVGASYYIR----------SMEIEG--- 59
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
R ++WD +G ER++ + + + V+D++ + T SL+ W E+ T SA
Sbjct: 60 RTILFQIWDTAGQERFRSLVPMYLRDADIALLVYDITSKETFHSLELWRTELLT----SA 115
Query: 141 PLASGGPGGLPVPYVVIGNKADVAAK 166
P V V+GNK+D+ AK
Sbjct: 116 PCH--------VTTAVVGNKSDLGAK 133
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 26/140 (18%)
Query: 24 VLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERDF 83
V+++GDSGVGKTS+ + S + ++G VKH+ +R
Sbjct: 186 VVIIGDSGVGKTSIAQRFAQDSFSENTASSVGAGYFVKHLEI-------------EDRKV 232
Query: 84 FVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPLA 143
+ ++WD +G E ++ + + V+D++ + +LQ W ++ T+
Sbjct: 233 YFQIWDTAGQENFRSLVPMFLRDAKIALLVYDITSMESFLNLQAWQSDLLTAEP------ 286
Query: 144 SGGPGGLPVPYVVIGNKADV 163
V VIGNK+D+
Sbjct: 287 -------EVTVAVIGNKSDL 299
>gi|357166898|ref|XP_003580906.1| PREDICTED: ras-related protein RABC1-like [Brachypodium distachyon]
Length = 215
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 28/162 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGK+SL+ L SF S TIG VK + +I G +
Sbjct: 21 KLLLIGDSGVGKSSLL-LRFTADSFEDLSPTIGVDFKVKMV----------NIAGKKLK- 68
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEIATSGTFSAP 141
+ +WD +G ER++ S Y G+I V+D+++R T T+L WA EI T
Sbjct: 69 --LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDC 126
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQW 183
+ +++GNK D ++ G ++ AR++
Sbjct: 127 IK-----------MLVGNKVDKESERAVTKKEG--IEFAREY 155
>gi|410896858|ref|XP_003961916.1| PREDICTED: ras-related protein Rab-9A-like [Takifugu rubripes]
Length = 202
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 87/216 (40%), Gaps = 47/216 (21%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+V+++GD GVGK+SL+N V + TIG K + +
Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNKFDAHLFHTIGVEFLNKELEVDGHQVT----------- 57
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ R+ Y + + + ++ +L W E P
Sbjct: 58 --LQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDNQSFLNLSNWKKEFIYYADVKEP- 114
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTESF 202
P+VV+GNK DV ++ T ++ A+QW ++ G P E
Sbjct: 115 -------EKFPFVVLGNKLDVTERQVT-------LEEAQQWCQENGGYPYFE-------- 152
Query: 203 PGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDE 238
+AK+A EA F +RR + SDE
Sbjct: 153 -------TSAKDATNVAEA----FEEAVRRVFASDE 177
>gi|340718262|ref|XP_003397590.1| PREDICTED: ras-related protein Rab-7a-like [Bombus terrestris]
gi|350401790|ref|XP_003486263.1| PREDICTED: ras-related protein Rab-7a-like [Bombus impatiens]
Length = 207
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 76/175 (43%), Gaps = 32/175 (18%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVSKKFSNQYKATIGADFLTKEVMV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V D+S + SL W E + P
Sbjct: 56 IVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPSSFKSLDSWRDEFLIQASPRDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAK--EGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+GNK D+ +K G + A+QW + + +P E
Sbjct: 116 --------DNFPFVVLGNKVDLESKVIHGKK---------AQQWCQSKNNIPYFE 153
>gi|307202148|gb|EFN81648.1| Ras-related protein Rab-32 [Harpegnathos saltator]
Length = 657
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 21/146 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+G+ G GKTS++ V TIG +K + + D
Sbjct: 455 KILVIGELGAGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNW------------DPHTI 502
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ +
Sbjct: 503 IRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSATLDAVVKWKQDLDSKVQL---- 558
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEG 168
P G P+P V++ NK D KEG
Sbjct: 559 ----PDGSPIPCVLLANKCD-QHKEG 579
>gi|432933159|ref|XP_004081834.1| PREDICTED: ras-related protein Rab-9A-like [Oryzias latipes]
Length = 201
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 28/176 (15%)
Query: 19 TGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGD 78
T ++V+++GD GVGK+S++N V + TIG K + S
Sbjct: 5 TSLLKVILLGDGGVGKSSIMNRYVTNKFDAHLFHTIGVEFLNKDLEVDS----------- 53
Query: 79 SERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTF 138
R +++WD +G ER++ R+ Y + + + ++ +L W E
Sbjct: 54 --RQVTLQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDHQSFLNLGNWKKEFIYYADV 111
Query: 139 SAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P P+VV+GNK DV ++ + + ARQW ++ G P E
Sbjct: 112 KEP--------EKFPFVVLGNKVDVTERQVS-------TEEARQWCQENGDYPYYE 152
>gi|62858521|ref|NP_001016372.1| RAB15, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89267008|emb|CAJ81786.1| RAB15, member RAS onocogene family [Xenopus (Silurana) tropicalis]
gi|213624493|gb|AAI71178.1| RAB15, member RAS onocogene family [Xenopus (Silurana) tropicalis]
gi|213625715|gb|AAI71180.1| RAB15, member RAS onocogene family [Xenopus (Silurana) tropicalis]
Length = 212
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
R+L++GDSGVGKT L+ TIG +K I + G R
Sbjct: 10 RLLLIGDSGVGKTCLLCRFTDNEFHPSHISTIGVDFKMKTI----------EVDGIKVR- 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ERY+ Y + G+ V+D++ R+ + KWA ++
Sbjct: 59 --IQIWDTAGQERYQTITKQYYRRAQGIFLVYDITSERSYQHIMKWASDVDEY------- 109
Query: 143 ASGGPGGLPVPYVVIGNKADVAAK 166
P G V ++IGNKAD K
Sbjct: 110 ---APDG--VQKILIGNKADEEQK 128
>gi|348511017|ref|XP_003443041.1| PREDICTED: ras-related protein Rab-32-like [Oreochromis niloticus]
Length = 224
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 20/151 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+GD GVGK+S+V V R +T ++GV + +I+ D +
Sbjct: 15 KVLVIGDLGVGKSSVVMRYVN----KRFDETYKASIGVDF--------ALKTIEWDPKTV 62
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI G ER K+ + Y + G + V D++ T + +W ++ T +
Sbjct: 63 VRLQLWDIGGQERVKNMSRVYYKEAMGAVVVFDITNSCTLEAASEWKQDLDTKVRLDS-- 120
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSS 173
G P+P V++ NK D+ ++ SS
Sbjct: 121 ------GQPIPAVLLANKCDLTGRDEALVSS 145
>gi|81251485|gb|ABB70064.1| WSSV receptor Rab7 [Penaeus monodon]
gi|254212147|gb|ACT65737.1| Rab7 [Litopenaeus vannamei]
gi|305693531|gb|ADM66002.1| Rab7 [Penaeus monodon]
Length = 205
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 28/173 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVMV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ T SL W E + P
Sbjct: 56 LVTMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVTSPNTFKSLDSWRDEFLIQASPRDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+GNK D+ R S A+QW + +P E
Sbjct: 116 --------DHFPFVVLGNKIDLE----NRAVSTK---RAQQWCHSKNEVPYFE 153
>gi|68481999|ref|XP_715017.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46436619|gb|EAK95978.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|238878219|gb|EEQ41857.1| GTP-binding protein ypt5 [Candida albicans WO-1]
Length = 221
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 23/144 (15%)
Query: 20 GQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDS 79
Q +++++G+S VGK+S+V+ VK + TIG + IT +S
Sbjct: 11 AQFKLVLLGESAVGKSSIVHRFVKNTFDDMRESTIGAAFLTQTITIP-----------ES 59
Query: 80 ERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFS 139
E E+WD +G ERYK + Y N + V+D++ R + Q W E
Sbjct: 60 ETTIKFEIWDTAGQERYKSLAPMYYRNANAALCVYDITSRSSFQKAQDWIKE-------- 111
Query: 140 APLASGGPGGLPVPYVVIGNKADV 163
L P G+ + ++GNK+D+
Sbjct: 112 --LKKQAPEGIVIA--LVGNKSDL 131
>gi|167382026|ref|XP_001735948.1| RAB [Entamoeba dispar SAW760]
gi|165901854|gb|EDR27841.1| RAB, putative [Entamoeba dispar SAW760]
Length = 190
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 26/140 (18%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++ +VGD VGKTSLVN KG + TIG ++ ++N IK E
Sbjct: 7 KICLVGDQSVGKTSLVNRYAKGGFSTNEKATIG-----------ANFIATNYIKQGQE-- 53
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+ LWD +G E+Y+ S+ Y G + V+D++ R T ++ W EI F A
Sbjct: 54 IKLALWDTAGQEKYRSMVSMYYRGSRGAVIVYDVTNRTTFDDIRGWCDEI-----FKAE- 107
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
V +++GNKAD
Sbjct: 108 -------SDVVCMLVGNKAD 120
>gi|324508943|gb|ADY43771.1| Ras-related protein Rab-7a [Ascaris suum]
Length = 213
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 21/150 (14%)
Query: 16 GPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSI 75
G ++V+++GDSGVGKTSL+N V ++ TIG K + G
Sbjct: 8 GRKKSLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKDVMIG--------- 58
Query: 76 KGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATS 135
+R +++WD +G ER++ Y + + +D++ + SL+ W E
Sbjct: 59 ----DRMVTMQIWDTAGQERFQSLGVAFYRGADCCVLTYDVTNASSFKSLESWRDEFLIQ 114
Query: 136 GTFSAPLASGGPGGLPVPYVVIGNKADVAA 165
+ P P+V++GNK D+ A
Sbjct: 115 ASPRDP--------EHFPFVLLGNKIDLEA 136
>gi|393907258|gb|EFO20709.2| RAB-33 protein [Loa loa]
Length = 326
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 72/147 (48%), Gaps = 27/147 (18%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+V+++GD+GVGKT L G P+QT T+GV S +I G+ R
Sbjct: 121 KVIILGDAGVGKTCLSFRFCNGRF---PAQT-EATIGVDF------RERSVAIDGELIR- 169
Query: 83 FFVELWDISGHERYKDCRSIL---YSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFS 139
V+LWD +G ERY+ +SI+ Y +N V+FV+D+S + SL W E S
Sbjct: 170 --VQLWDTAGQERYR--QSIVSHYYRNVNAVVFVYDVSNPSSFHSLNDWINECRKHSVSS 225
Query: 140 APLASGGPGGLPVPYVVIGNKADVAAK 166
P+++IGNK D+ +
Sbjct: 226 TN---------DTPHILIGNKCDLVVE 243
>gi|432945329|ref|XP_004083544.1| PREDICTED: ras-related protein Rab-32-like [Oryzias latipes]
Length = 213
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K I + DS+
Sbjct: 15 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVINW------------DSKTL 62
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + +
Sbjct: 63 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDVTRGATFEAVSKWKHDLDSKVKLT--- 119
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
G P+P V++ NK D
Sbjct: 120 -----NGNPIPAVLLANKCD 134
>gi|253746260|gb|EET01667.1| RabB [Giardia intestinalis ATCC 50581]
Length = 183
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 21/149 (14%)
Query: 17 PPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIK 76
P +++V G S VGK+ L+ +G + TIG GV+ + ++
Sbjct: 10 PLVVRLKVTTTGMSQVGKSCLIKHYCEGRFVKKYLPTIGVDYGVRAL----------ELE 59
Query: 77 GDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
G + R + +D+SG + Y+D R YS G++ V D+S R + T+L+K+ E S
Sbjct: 60 GCTVR---INFFDLSGLDEYQDIRKEFYSDTQGLLLVFDMSNRESFTALEKYYGEFVKSS 116
Query: 137 TFSAPLASGGPGGLPVPYVVIGNKADVAA 165
T G G +IG KAD+ A
Sbjct: 117 T--------GTGSATASVYLIGTKADLPA 137
>gi|449701753|gb|EMD42510.1| small GTPase EhRabF3, putative [Entamoeba histolytica KU27]
Length = 208
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 30/174 (17%)
Query: 1 MFWKERERENKELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGV 60
+ KE+ R+ K + ++ +VGD+ VGKT +VN +VKG + TIG
Sbjct: 7 LLEKEKNRKRKLMTEEAA----KMCLVGDTSVGKTCIVNRLVKGVFNNSEKSTIG----- 57
Query: 61 KHITYGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRR 120
S + SI+ D+ + F + +WD +G E+Y+ S+ Y G + V+D++Q
Sbjct: 58 -------SNFVTASIQVDN-KPFRLAIWDTAGQEKYRSMVSMYYRGSLGAMLVYDVTQES 109
Query: 121 TKTSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSG 174
+ ++ W E+ + + ++IGNK D+ A + G
Sbjct: 110 SFQDVRMWFDELKNTEK-------------DIAVIIIGNKCDLVANRVVSTADG 150
>gi|432860022|ref|XP_004069352.1| PREDICTED: ras-related protein Rab-7a-like isoform 1 [Oryzias
latipes]
gi|432860024|ref|XP_004069353.1| PREDICTED: ras-related protein Rab-7a-like isoform 2 [Oryzias
latipes]
Length = 206
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 28/173 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V D++ T +L W E + P
Sbjct: 56 LVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+GNK D+ ++ T A+ W + + +P E
Sbjct: 116 EN--------FPFVVLGNKIDLENRQVT-------TKRAQAWCQSKNNIPYFE 153
>gi|363750286|ref|XP_003645360.1| hypothetical protein Ecym_3028 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888994|gb|AET38543.1| Hypothetical protein Ecym_3028 [Eremothecium cymbalariae
DBVPG#7215]
Length = 208
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL++ V + TIG K +T D ++
Sbjct: 9 LKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTV------------DGDK 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ ++ +++ W E +P
Sbjct: 57 VATMQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNSKSFENIKAWRDEFLVHANVPSP 116
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
P+V++GNK DV
Sbjct: 117 --------ETFPFVILGNKIDV 130
>gi|219116893|ref|XP_002179241.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409132|gb|EEC49064.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 213
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 32/169 (18%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VL++GD+ VGK+S++ S TIG VKH+ ++G +
Sbjct: 16 KVLIIGDASVGKSSMLLRFTDDSFDEHIQSTIGVDFKVKHL----------EVEGKRVK- 64
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+ +WD +G ER++ S Y +GV+ V+D+++ + +LQ+W E+
Sbjct: 65 --LTIWDTAGQERFRTLTSSYYRGAHGVVLVYDVTRTDSFENLQQWLKEVQMY------- 115
Query: 143 ASGGPG-GLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLL 190
PG G V +++GNK D+ + + A W QG+L
Sbjct: 116 ---SPGNGESVVKLLVGNKCDLERQVP--------FEEADAWARSQGML 153
>gi|196002878|ref|XP_002111306.1| hypothetical protein TRIADDRAFT_55139 [Trichoplax adhaerens]
gi|190585205|gb|EDV25273.1| hypothetical protein TRIADDRAFT_55139 [Trichoplax adhaerens]
Length = 215
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 23/156 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSF-SRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
+VL+VGDSGVGKT ++ L K + F S TIG + K + ++
Sbjct: 13 KVLIVGDSGVGKTCVL-LRFKDNDFQSTLLSTIGIDLVNKQVVV-------------DDK 58
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ERYK Y +G++ V+D++++++ +++ W I A
Sbjct: 59 KIMLQIWDTAGQERYKTLTKAFYRGTSGILLVYDITKKKSFDNIRYWMKCI-------AD 111
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV 177
G P+ ++V GNK D+ + + G L+
Sbjct: 112 CYDGDLENAPILFIV-GNKNDLPRERKIKYDDGQLL 146
>gi|302412429|ref|XP_003004047.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
gi|261356623|gb|EEY19051.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
Length = 157
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 26/149 (17%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+ +++V+G GVGKTSLV KGS PSQ T G+S + + GDS+
Sbjct: 5 EAKIVVLGSQGVGKTSLVERFCKGSF--NPSQITS--------TVGASFMTKRVVDGDSD 54
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
+++WD +G ER++ + Y N I + ++ ++ + W E+ +
Sbjct: 55 TTVRLQIWDTAGQERFRSISRLYYRGANACILCYSITDAQSFAEMGLWLNELRRN----- 109
Query: 141 PLASGGPGGLPVPYV--VIGNKADVAAKE 167
LP V V+G KAD+ A++
Sbjct: 110 ---------LPADVVLHVVGTKADMVARD 129
>gi|348531663|ref|XP_003453328.1| PREDICTED: ras-related protein Rab-18-B-like [Oreochromis
niloticus]
Length = 205
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 24/149 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
+++L++G+SGVGK+SL+ + + S TIG VK + +I G+ +
Sbjct: 9 LKLLIIGESGVGKSSLLLRFTEDTFDPEQSATIGVDFKVKTL----------AIDGNKAK 58
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+ +WD +G ER++ Y GVI V+D+++R T T L+ W E+ T T +
Sbjct: 59 ---LAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTKRDTFTKLENWLNELETYTTRN-- 113
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTR 170
+ +++GNK D +E R
Sbjct: 114 ---------DIVKMLVGNKIDKDDREVDR 133
>gi|296531381|ref|NP_001171837.1| ras-related protein Rab-18-like [Saccoglossus kowalevskii]
Length = 207
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 28/151 (18%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQ--TIGCTVGVKHITYGSSGSSSNSIKGDS 79
+++L++G+SGVGK+SL+ L +F P Q TIG VK + S++G++
Sbjct: 11 LKILIIGESGVGKSSLL-LRFTDDTFD-PEQPATIGVDFKVKTL----------SVEGNT 58
Query: 80 ERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFS 139
+ + +WD +G ER++ Y GVI V+D+S R++ L W E+ T T S
Sbjct: 59 TK---LAIWDTAGQERFRTLTPSYYRGAQGVILVYDVSNRKSFQKLDMWLNELETFSTKS 115
Query: 140 APLASGGPGGLPVPYVVIGNKADVAAKEGTR 170
+ +++GNK D+ +E R
Sbjct: 116 -----------DIVKMLVGNKIDMDKREVDR 135
>gi|281202317|gb|EFA76522.1| Rho GTPase [Polysphondylium pallidum PN500]
Length = 219
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
+++V+G+ VGKTSL+NL VK + S+ + TVG + ++ S+K S
Sbjct: 6 CKIIVMGEEKVGKTSLLNLYVKNQTLSKMYKQ---TVGAEFLS---------SVKSVSGL 53
Query: 82 DFFVELWDISGHERYKDCR-SILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATS-GTFS 139
+LWDI+G + ++ + LY + ++ V DL+ ++ +L W E S T
Sbjct: 54 KLTAQLWDIAGRQTFRQITFTNLYKGADALVLVFDLTDLKSFENLDGWLEEFKLSVCTQY 113
Query: 140 APLASGGPGGLPVPYVVIGNKADVAAKE-GTRGSSGNLVDAARQWVEKQGLLPSSEELPL 198
G + +P ++IGNK D+ K TR +A QW + + L S E +
Sbjct: 114 IKNDLGDSRFVRLPMMLIGNKCDLVDKRVVTR-------EAVEQWCQSKSKL-SIEYFEM 165
Query: 199 TESF 202
+ F
Sbjct: 166 SAMF 169
>gi|432908627|ref|XP_004077954.1| PREDICTED: ras-related protein Rab-13-like [Oryzias latipes]
Length = 200
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 25/152 (16%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGKT L+ + + + TIG VK I + G +
Sbjct: 10 KLLLIGDSGVGKTCLIIRFAEDNYNTTYISTIGIDFKVKTI----------EVDGKKVK- 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER+K + Y G+I V+D++ ++ ++Q W I +
Sbjct: 59 --LQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIREN------- 109
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSG 174
AS G V +++GNK DV AK +G
Sbjct: 110 ASAG-----VTRMLLGNKCDVEAKRKVSKETG 136
>gi|332022976|gb|EGI63242.1| Ras-related protein Rab-7a [Acromyrmex echinatior]
Length = 207
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 28/173 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMV-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V D+S + SL W E F
Sbjct: 56 IVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPTSFKSLDSWRDE------FLIQ 109
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
+ P P+VV+GNK D+ ++ + A+QW + + +P E
Sbjct: 110 ASPRDPDNF--PFVVLGNKVDLESRAVSSKR-------AQQWCQSKNNIPYFE 153
>gi|224062432|ref|XP_002197779.1| PREDICTED: ras-related protein Rab-27A isoform 1 [Taeniopygia
guttata]
gi|449471031|ref|XP_004176940.1| PREDICTED: ras-related protein Rab-27A isoform 2 [Taeniopygia
guttata]
Length = 221
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 99/238 (41%), Gaps = 35/238 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++ L +GDSGVGKTSL+ G S+ T+G K + Y +G + + G +R
Sbjct: 10 IKFLALGDSGVGKTSLLYQYTDGKFNSKFITTVGIDFREKRVVYRPNG--PDGVGGRGQR 67
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ + + G + + DL+ ++ +++ W ++ P
Sbjct: 68 -IHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENP 126
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
V+ GNK+D+ + + A++ EK G +P E+
Sbjct: 127 -----------DIVLCGNKSDLEDQRMVKEED------AKELAEKYG-------IPYFET 162
Query: 202 FPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAPNPWSISPTHKPIQRLDE 259
G ++ A E D +MK R D+ P S H ++L+E
Sbjct: 163 SAANGNNVSKAIETLLD--LIMK------RMERCVDKSWIPEGVVRSNGHSSTEQLNE 212
>gi|67483164|ref|XP_656866.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56474092|gb|EAL51480.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790152|dbj|BAD82872.1| small GTPase EhRabX24 [Entamoeba histolytica]
gi|449709734|gb|EMD48941.1| small GTPase EhRabX24, putative [Entamoeba histolytica KU27]
Length = 202
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 69/147 (46%), Gaps = 25/147 (17%)
Query: 17 PPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIK 76
G+++ +++G+S VGKTSL+N++ G T+ K + +
Sbjct: 6 TKVGEIKAIIIGESSVGKTSLLNVLENGKLVGDIKATVSIDSHTKEV----------QVN 55
Query: 77 GDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
G + F + ++D +G ER++ S Y +NG+I V D++ R+T +Q W EI +
Sbjct: 56 G---KKFKLRIYDTAGQERFRSMVSSYYRDVNGIIIVFDVTDRKTFDQVQYWMDEIKKNT 112
Query: 137 TFSAPLASGGPGGLPVPYVVIGNKADV 163
+ V++GNK+D+
Sbjct: 113 QVYTYI------------VLVGNKSDL 127
>gi|402587142|gb|EJW81078.1| member Ras oncogene family RAB18A [Wuchereria bancrofti]
Length = 200
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 24/155 (15%)
Query: 16 GPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSI 75
G +++L++G+SGVGK+SL+ V + + TIG V + N +
Sbjct: 5 GVAITTLKILIIGESGVGKSSLMLRFVDDTFDPEIAATIGVDFRVTTMMV-----DQNRV 59
Query: 76 KGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATS 135
K + +WD +G ER++ Y GVI V+D+S R+T L W E+ T
Sbjct: 60 K--------LAIWDTAGQERFRTLTPSYYRGAQGVICVYDVSNRQTFERLSHWMNEVDTY 111
Query: 136 GTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTR 170
T + + ++IGNK D++ +E TR
Sbjct: 112 STKTDAVK-----------MLIGNKIDISNREVTR 135
>gi|320166438|gb|EFW43337.1| Rab9a protein [Capsaspora owczarzaki ATCC 30864]
Length = 211
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 21/146 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GD GVGK+SL+N V ++ TI GV+ + N + +
Sbjct: 19 LKVVILGDGGVGKSSLMNRFVNNEFDAQSFHTI----GVEFL---------NKVVALNNE 65
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+ +++WD +G ER+K R+ Y + + V + ++ +L W E + P
Sbjct: 66 SYTLQIWDTAGQERFKSLRTPFYRGADCCLLVFGIDDEQSFRNLTMWKKEFLYYADVADP 125
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKE 167
P+VV+GNK DV A++
Sbjct: 126 --------EHFPFVVVGNKIDVRARQ 143
>gi|312082237|ref|XP_003143361.1| RAB-33 protein [Loa loa]
Length = 324
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 72/147 (48%), Gaps = 27/147 (18%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+V+++GD+GVGKT L G P+QT T+GV S +I G+ R
Sbjct: 119 KVIILGDAGVGKTCLSFRFCNGRF---PAQT-EATIGVDF------RERSVAIDGELIR- 167
Query: 83 FFVELWDISGHERYKDCRSIL---YSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFS 139
V+LWD +G ERY+ +SI+ Y +N V+FV+D+S + SL W E S
Sbjct: 168 --VQLWDTAGQERYR--QSIVSHYYRNVNAVVFVYDVSNPSSFHSLNDWINECRKHSVSS 223
Query: 140 APLASGGPGGLPVPYVVIGNKADVAAK 166
P+++IGNK D+ +
Sbjct: 224 TN---------DTPHILIGNKCDLVVE 241
>gi|193657249|ref|XP_001950152.1| PREDICTED: ras-related protein Rab-38-like isoform 1 [Acyrthosiphon
pisum]
Length = 239
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 21/167 (12%)
Query: 16 GPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSI 75
P ++LV+G+ G GKTS++ V TIG +K S+
Sbjct: 33 APTEYLFKILVIGELGTGKTSIIKRYVHKFFSQHYRATIGVDFALK------------SL 80
Query: 76 KGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATS 135
+ DS ++LWDI+G ER+ + + Y G V D+++ T ++ KW ++
Sbjct: 81 EWDSNTVIRLQLWDIAGQERFGNMTRVYYKDALGAFVVFDVTRPATFEAVAKWKQDLDAK 140
Query: 136 GTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQ 182
+ G P+P V++ NK D KEG S + + ++
Sbjct: 141 VSLE--------DGSPIPCVLLANKCD-ETKEGMVNSIAKMDEFCKE 178
>gi|45185690|ref|NP_983406.1| ACR003Cp [Ashbya gossypii ATCC 10895]
gi|44981445|gb|AAS51230.1| ACR003Cp [Ashbya gossypii ATCC 10895]
gi|374106612|gb|AEY95521.1| FACR003Cp [Ashbya gossypii FDAG1]
Length = 208
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 20/142 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL++ V + TIG K +T D ++
Sbjct: 9 LKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTV------------DGDK 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ ++ +++ W E +P
Sbjct: 57 VATMQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNAKSFENVKSWRDEFLVHANVPSP 116
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
+ P+V++GNK DV
Sbjct: 117 ES--------FPFVILGNKIDV 130
>gi|623592|gb|AAA74120.1| putative [Nicotiana tabacum]
Length = 204
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 29/170 (17%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + SQ T+G +T ++ D +R
Sbjct: 9 LKVIVLGDSGVGKTSLMNRYVH----KKFSQQYKATIGADFVT--------KELQID-DR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ R+ +L W E
Sbjct: 56 LVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDNLDNWHEEFLKQ------ 109
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGL 189
+ P P++++GNK D+ G + +V A++W +G+
Sbjct: 110 --ANPPDPKTFPFILLGNKIDID------GGNSRVVSEKKAKEWCSSKGI 151
>gi|47225370|emb|CAG11853.1| unnamed protein product [Tetraodon nigroviridis]
Length = 160
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 25/152 (16%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGKT L+ + + S TIG VK I + G +
Sbjct: 10 KLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTI----------DVDGKKVK- 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER+K + Y G+I V+D++ ++ ++Q W I +
Sbjct: 59 --LQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKEN------- 109
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSG 174
AS G V +++GNK D+ AK +G
Sbjct: 110 ASAG-----VSRMLLGNKCDIEAKRKVSRETG 136
>gi|444314739|ref|XP_004178027.1| hypothetical protein TBLA_0A07180 [Tetrapisispora blattae CBS 6284]
gi|387511066|emb|CCH58508.1| hypothetical protein TBLA_0A07180 [Tetrapisispora blattae CBS 6284]
Length = 208
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 20/141 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL++ V + SQ T+G +T + D++
Sbjct: 9 LKVIILGDSGVGKTSLMHRYVN----DKYSQQYKATIGADFLT--------KEVAIDNDT 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ ++ +++ W E S+P
Sbjct: 57 TATMQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNPKSFENIKSWRDEFLIHANVSSP 116
Query: 142 LASGGPGGLPVPYVVIGNKAD 162
P+V++GNK D
Sbjct: 117 --------ETFPFVILGNKVD 129
>gi|307188292|gb|EFN73084.1| Ras-related protein Rab-7a [Camponotus floridanus]
Length = 207
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 28/173 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMV-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V D+S + SL W E F
Sbjct: 56 IVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPTSFKSLDSWRDE------FLIQ 109
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
+ P P+VV+GNK D+ ++ + A+QW + + +P E
Sbjct: 110 ASPRDPDNF--PFVVLGNKVDLESRAVSSKR-------AQQWCQSKNNIPYFE 153
>gi|395848703|ref|XP_003796988.1| PREDICTED: ras-related protein Rab-33A [Otolemur garnettii]
Length = 237
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 74/144 (51%), Gaps = 29/144 (20%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++V+GDS VGKT L GS + TIG K + I+G+ +
Sbjct: 38 KIIVIGDSNVGKTCLTFRFCGGSFPDKTEATIGVDFREKTV----------EIEGEKIK- 86
Query: 83 FFVELWDISGHERYKDCRSIL---YSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFS 139
V++WD +G ER++ +S++ Y ++ V+FV+D+++ + T+L+ W E +G
Sbjct: 87 --VQVWDTAGQERFR--KSMVEHYYRNVHAVVFVYDVTKMTSFTNLKMWIQE--CNGHAV 140
Query: 140 APLASGGPGGLPVPYVVIGNKADV 163
PL VP V++GNK D+
Sbjct: 141 PPL---------VPKVLVGNKCDL 155
>gi|395822218|ref|XP_003784419.1| PREDICTED: ras-related protein Rab-27A-like [Otolemur garnettii]
Length = 221
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 98/239 (41%), Gaps = 35/239 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++ L +GDSGVGKTS++ G S+ T+G K + Y ++G +G +
Sbjct: 10 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAIGRG---Q 66
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ + + G + + DL+ ++ +++ W ++ T P
Sbjct: 67 RIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQTHAYCENP 126
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
V+ GNK+D+ + + + AR EK G +P E+
Sbjct: 127 -----------DIVLCGNKSDLEDQRVVKE------EEARGLAEKYG-------IPYFET 162
Query: 202 FPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAPNPWSISPTHKPIQRLDEN 260
G I+ A E D +MK R D+ P S H +L EN
Sbjct: 163 SAANGTNISQAIEMLLD--LIMK------RMERCVDKSWIPEGVVRSNGHTSTSQLSEN 213
>gi|449471775|ref|XP_002198100.2| PREDICTED: ras-related protein Rab-11A [Taeniopygia guttata]
Length = 258
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 84/171 (49%), Gaps = 31/171 (18%)
Query: 19 TGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGD 78
+ Q V+++GDSGVGK++L++ + + F+ S++ T+GV+ T SI+ D
Sbjct: 51 SAQTAVVLIGDSGVGKSNLLSRFTR-NEFNLESKS---TIGVEFAT--------RSIQVD 98
Query: 79 SERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTF 138
+ ++WD +G ERY+ S Y G + V+D+++ T ++++W E+
Sbjct: 99 G-KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADS 157
Query: 139 SAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGL 189
+ + +++GNK+D+ R D AR + EK GL
Sbjct: 158 N------------IVIMLVGNKSDL------RHLRAVPTDEARAFAEKNGL 190
>gi|225706886|gb|ACO09289.1| Ras-related protein Rab-7 [Osmerus mordax]
Length = 205
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 75/173 (43%), Gaps = 28/173 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ T +L W E + P
Sbjct: 56 LVTMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+GNK D+ ++ T A+ W + + +P E
Sbjct: 116 --------ENFPFVVLGNKIDLENRQVT-------TKRAQAWCQSKSNIPYFE 153
>gi|356505277|ref|XP_003521418.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
Length = 211
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 26/141 (18%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++L++GDSGVGK+SL+ + SS S TIG +K +T G +
Sbjct: 16 KILLIGDSGVGKSSLLVSFI-SSSVEDLSPTIGVDFKIKTLTVGG-------------KR 61
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEIATSGTFSAP 141
+ +WD +G ER++ S Y + G+I V+D+++R T T+L + W+ E+ T
Sbjct: 62 LKLTIWDTAGQERFRTLNSSYYRKAQGIILVYDVTRRETFTNLSEVWSKEVELYST---- 117
Query: 142 LASGGPGGLPVPYVVIGNKAD 162
+++GNK D
Sbjct: 118 -------NQDCVKILVGNKVD 131
>gi|308502904|ref|XP_003113636.1| hypothetical protein CRE_26528 [Caenorhabditis remanei]
gi|308263595|gb|EFP07548.1| hypothetical protein CRE_26528 [Caenorhabditis remanei]
Length = 262
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 29/177 (16%)
Query: 6 RERENKELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITY 65
R+ E P + +++V+GDSGVGKTS++ G+ + RP + T+G +++
Sbjct: 36 RDHEQTIATSTSPKNKAKIVVLGDSGVGKTSIIYRHRYGAHY-RP---VNATIGASFVSF 91
Query: 66 GSSGSSSNSIKGDSERDFFVEL--WDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKT 123
S+RD V L WD +G ER++ + + + V+D++ R T
Sbjct: 92 DVG----------SDRDEMVRLQVWDTAGQERFRCMVPMYMRNADAALIVYDVTDRNTFE 141
Query: 124 SLQKWAVEI-ATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDA 179
++KW ++ +SGT A + +IGNK D+ K + G + A
Sbjct: 142 DVEKWLKDLDRSSGTEEANV------------FLIGNKTDLVEKREVSEAEGRAMAA 186
>gi|340506579|gb|EGR32688.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 193
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 29/167 (17%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTS+VN V F + Q IT G+S + KG+ +
Sbjct: 7 LKVVVLGDSGVGKTSIVNRFV-LDKFEQRQQ----------ITQGASFVQKDFKKGN--K 53
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G E+Y+ + Y I V+D++ + + +LQ+W ++ + +
Sbjct: 54 IFKLQIWDTAGQEKYRTLGPLYYRDSEAAIVVYDITNKNSFQTLQQWIKDLKDYASEN-- 111
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNL----VDAARQWV 184
+ V++GNK D+ +E + L + A Q+V
Sbjct: 112 ----------INIVLVGNKTDLIEQEQVSFDNAKLYAKNISAKFQYV 148
>gi|322792890|gb|EFZ16723.1| hypothetical protein SINV_13124 [Solenopsis invicta]
Length = 209
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 28/173 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 11 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMV-------------EDR 57
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V D+S + SL W E F
Sbjct: 58 IVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPTSFKSLDSWRDE------FLIQ 111
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
+ P P+VV+GNK D+ ++ + A+QW + + +P E
Sbjct: 112 ASPRDPDNF--PFVVLGNKVDLESRAVSSKR-------AQQWCQSKNNIPYFE 155
>gi|294898858|ref|XP_002776410.1| Rab11b, putative [Perkinsus marinus ATCC 50983]
gi|239883348|gb|EER08226.1| Rab11b, putative [Perkinsus marinus ATCC 50983]
Length = 220
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 71/147 (48%), Gaps = 24/147 (16%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++++VGD+ VGKT L++ +KG+ P+ TIG + + G+
Sbjct: 10 KIVLVGDATVGKTHLLSRYIKGTLPRAPTATIGVEFATRTVPLAVGGTVK---------- 59
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++WD +G ERY+ S Y + G + V+D+++R T + KW E+ + + P
Sbjct: 60 --AQIWDTAGQERYRAITSAHYRRAVGALLVYDVTRRNTFLNCSKWMEELRQN---AEP- 113
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGT 169
+ +++GNK D+ K+ +
Sbjct: 114 --------DIVILLVGNKIDLVEKDSS 132
>gi|432913216|ref|XP_004078963.1| PREDICTED: ras-related protein Rab-18-B-like [Oryzias latipes]
Length = 205
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 74/149 (49%), Gaps = 24/149 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
+++L++G+SGVGK+SL+ + + S TIG VK + +I+G+ +
Sbjct: 9 LKLLIIGESGVGKSSLLLRFTEDTFDPEQSATIGVDFKVKTL----------AIEGNKAK 58
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+ +WD +G ER++ Y GVI V+D+S+R + T L+ W E+ T T +
Sbjct: 59 ---LAIWDTAGQERFRTLTPSYYRGAQGVILVYDVSRRDSFTKLENWLNELETYTTRN-- 113
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTR 170
+ +++GNK D +E R
Sbjct: 114 ---------DIVKMLVGNKIDKDDREVDR 133
>gi|367005122|ref|XP_003687293.1| hypothetical protein TPHA_0J00360 [Tetrapisispora phaffii CBS 4417]
gi|357525597|emb|CCE64859.1| hypothetical protein TPHA_0J00360 [Tetrapisispora phaffii CBS 4417]
Length = 209
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 19/142 (13%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL++ V + SQ T+G +T + D +
Sbjct: 9 LKVIVLGDSGVGKTSLMHRYVN----DKYSQQYKATIGADFLT-------KEVVIDDGSQ 57
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ ++ +++ W E S+P
Sbjct: 58 AATMQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNPKSFDNIKSWRDEFLIHANVSSP 117
Query: 142 LASGGPGGLPVPYVVIGNKADV 163
P+V++GNK D+
Sbjct: 118 --------ETFPFVILGNKIDI 131
>gi|351700639|gb|EHB03558.1| Ras-related protein Rab-27A [Heterocephalus glaber]
Length = 220
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 29/203 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++ L +GDSGVGKTS++ G S+ T+G K + Y +SG +G +
Sbjct: 10 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGLDGALGRG---Q 66
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ + + G + + DL+ ++ +++ W ++ P
Sbjct: 67 RIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWITQLQMHAYCDNP 126
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
V+ GNK+D+ + + + AR EK G +P E+
Sbjct: 127 -----------DIVLCGNKSDLEDQRVVKE------EEARALAEKYG-------VPYFET 162
Query: 202 FPGGGGLIAAAKEARYDKEAVMK 224
G I+ A E D +MK
Sbjct: 163 SAANGTNISPAIEGLLD--LIMK 183
>gi|348519351|ref|XP_003447194.1| PREDICTED: ras-related protein Rab-19-like [Oreochromis niloticus]
Length = 220
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 88/210 (41%), Gaps = 46/210 (21%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++++VGDS VGKT +V G + TIG V+ + I G +
Sbjct: 17 KIILVGDSDVGKTCVVQSFKSGIFIEKQQNTIGVDFTVRTL----------DIDGKKVK- 65
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y +G + +D+++R T S+ W E+ G S L
Sbjct: 66 --MQVWDTAGQERFRTITQSYYRSAHGAMVAYDITRRSTFESVPHWIREVELYGAASVVL 123
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTESF 202
++IGNK+D+ AK L + A E G+L + E
Sbjct: 124 ------------ILIGNKSDLHAKRQV------LFEDACNLAENSGVLAALE-------- 157
Query: 203 PGGGGLIAAAKEARYDKEAVMKFFRMLIRR 232
+AKEA+ + A + R L+ R
Sbjct: 158 -------TSAKEAQNIEAAFILMARELMAR 180
>gi|359482942|ref|XP_002284702.2| PREDICTED: ras-related protein RHN1-like [Vitis vinifera]
gi|297743285|emb|CBI36152.3| unnamed protein product [Vitis vinifera]
Length = 199
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
Q ++++VGD G GKTSLV VKG F TIG + ++ + ++K D
Sbjct: 10 QAKLVLVGDMGTGKTSLVLRFVKGQFFEHQEPTIGAAFFTQLLSLNEA-----TVKFD-- 62
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
+WD +G ERY + Y + V+D+S T +KW E+ G +
Sbjct: 63 ------IWDTAGQERYHSLAPMYYRGAAAAVVVYDISNVDTFVRAKKWVQELQKQGNKNL 116
Query: 141 PLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSG 174
+A ++ NK D+ +K G
Sbjct: 117 VMA------------LVANKCDLESKREVNTQEG 138
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.132 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,810,449,834
Number of Sequences: 23463169
Number of extensions: 263271797
Number of successful extensions: 938591
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4127
Number of HSP's successfully gapped in prelim test: 8580
Number of HSP's that attempted gapping in prelim test: 921369
Number of HSP's gapped (non-prelim): 13189
length of query: 333
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 190
effective length of database: 9,003,962,200
effective search space: 1710752818000
effective search space used: 1710752818000
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 77 (34.3 bits)