BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019959
(333 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C5J9|Y5483_ARATH Uncharacterized GTP-binding protein At5g64813 OS=Arabidopsis
thaliana GN=At5g64813 PE=1 SV=1
Length = 342
Score = 523 bits (1348), Expect = e-148, Method: Compositional matrix adjust.
Identities = 265/340 (77%), Positives = 292/340 (85%), Gaps = 8/340 (2%)
Query: 2 FWKERERENKELNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVK 61
FW+ERERENKE P GQVRVLVVGDSGVGKTSLV+LI KGSS RP QTIGCTVGVK
Sbjct: 3 FWRERERENKEQILAPLCGQVRVLVVGDSGVGKTSLVHLINKGSSIVRPPQTIGCTVGVK 62
Query: 62 HITYGSSGSSSNSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRT 121
HITYGS SSS+SI+GDSERDFFVELWD+SGHERYKDCRS+ YSQINGVIFVHDLSQRRT
Sbjct: 63 HITYGSPASSSSSIQGDSERDFFVELWDVSGHERYKDCRSLFYSQINGVIFVHDLSQRRT 122
Query: 122 KTSLQKWAVEIATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAAR 181
KTSLQKWA E+A +GTFSAPL SGGPGGLPVPY+V+GNKAD+AAKEGT+GSSGNLVDAAR
Sbjct: 123 KTSLQKWASEVAATGTFSAPLPSGGPGGLPVPYIVVGNKADIAAKEGTKGSSGNLVDAAR 182
Query: 182 QWVEKQGLLP-SSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMP 240
WVEKQGLLP SSE+LPL ESFPG GGLIAAAKE RYDKEA+ KFFRMLIRRRYFSDE+P
Sbjct: 183 HWVEKQGLLPSSSEDLPLFESFPGNGGLIAAAKETRYDKEALNKFFRMLIRRRYFSDELP 242
Query: 241 APNPWSISPT-HKPIQRLDENSSDDDKFYS-SGYSSDPY---NMLPPLPAQRNLTPPPTL 295
A +PWSISP QRLDE +SDDD+FY + + DPY N +PPLPAQRNLTPPPTL
Sbjct: 243 AASPWSISPVPTSSSQRLDEITSDDDQFYKRTSFHGDPYKYNNTIPPLPAQRNLTPPPTL 302
Query: 296 YPQQPVSVQENYNLPRFSLTGSQEISS--SARSKRTDINV 333
YPQQPVS +NY +PR+SL+ QE ++ SARSKR DINV
Sbjct: 303 YPQQPVSTPDNYTIPRYSLSSVQETTNNGSARSKRMDINV 342
>sp|Q5HYI8|RABL3_HUMAN Rab-like protein 3 OS=Homo sapiens GN=RABL3 PE=1 SV=1
Length = 236
Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 107/233 (45%), Gaps = 41/233 (17%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE----- 131
+ +++ELWD+ G K R++ Y+ +NG+IFVHDL+ +++ +L++W++E
Sbjct: 58 KTYYIELWDVGGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRWSLEALNRD 117
Query: 132 ------IATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVE 185
+ T+G + + +P +VIG K D E R R
Sbjct: 118 LVPTGVLVTNGDYDQEQFADN----QIPLLVIGTKLD-QIHETKRHEV-----LTRTAFL 167
Query: 186 KQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDE 238
+ P L T G A K +R FF +I +RYF E
Sbjct: 168 AEDFNPEEINLDCTNPRYLAAGSSNAVKLSR--------FFDKVIEKRYFLRE 212
>sp|Q6TNS7|RABL3_DANRE Rab-like protein 3 OS=Danio rerio GN=rabl3 PE=2 SV=1
Length = 233
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 85/153 (55%), Gaps = 19/153 (12%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYREGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE-IATS 135
+ F++ELWD+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E ++
Sbjct: 58 KAFYIELWDVGGSVGSASSVKSTRAVFYNSVNGIILVHDLTNKKSSQNLYRWSLEALSKD 117
Query: 136 GTFSAPLASGGP------GGLPVPYVVIGNKAD 162
+ + + S G VP ++IG K D
Sbjct: 118 SSPTGIIVSNGDYDREQFAENAVPLLLIGTKFD 150
>sp|Q9D4V7|RABL3_MOUSE Rab-like protein 3 OS=Mus musculus GN=Rabl3 PE=2 SV=1
Length = 236
Score = 91.7 bits (226), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 110/234 (47%), Gaps = 43/234 (18%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ PS T+GC+V ++ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCHNQVLGNPSWTVGCSVDIRVHDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSG 136
+ +++ELWD+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E+
Sbjct: 58 KTYYIELWDVGGSVGSASSVKSTRAVFYNSVNGIILVHDLTNKKSSQNLYRWSLEVLNRD 117
Query: 137 TF-SAPLASGGP------GGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGL 189
+ L + G +P +VIG K D E R + + +
Sbjct: 118 AVPTGVLVTNGDYDREQFADNQIPLLVIGTKLD-QIHETKR----------HEVLIRTAF 166
Query: 190 LP---SSEELPLTESFP--GGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDE 238
L ++EE+ L + P G A K +R FF +I +RYF E
Sbjct: 167 LAEDFNAEEINLDCTNPRSSAAGSSNAVKLSR--------FFDKVIEKRYFFRE 212
>sp|Q32LJ6|RABL3_BOVIN Rab-like protein 3 OS=Bos taurus GN=RABL3 PE=2 SV=2
Length = 236
Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 111/235 (47%), Gaps = 51/235 (21%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE----- 131
+ +++ELWD+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E
Sbjct: 58 KTYYIELWDVGGSVGSASSVKSTRAVFYNSVNGIILVHDLTNKKSSQNLYRWSLEALNRD 117
Query: 132 ------IATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVE 185
+ T+G + + +P +VIG K D E R + +
Sbjct: 118 LVPTGVLVTNGDYDREQFADN----QIPLLVIGTKLD-QIHENKR----------HEVLT 162
Query: 186 KQGLLP---SSEELPLTESFPG--GGGLIAAAKEARYDKEAVMKFFRMLIRRRYF 235
+ L ++EE+ L + P G A K +R FF +I +RYF
Sbjct: 163 RTAFLAEDFNAEEINLDCTNPRYLAAGSSNAVKLSR--------FFDKVIEKRYF 209
>sp|A4IHM6|RABL3_XENTR Rab-like protein 3 OS=Xenopus tropicalis GN=rabl3 PE=2 SV=1
Length = 235
Score = 91.3 bits (225), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 84/157 (53%), Gaps = 27/157 (17%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRLHEYREGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE----- 131
+ +++ELWD+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E
Sbjct: 58 KTYYIELWDVGGSVGSASSVKSTRAVFYNAVNGIILVHDLTNKKSSQNLYRWSLEALNRD 117
Query: 132 ------IATSGTFSAPLASGGPGGLPVPYVVIGNKAD 162
+ T+G + + +P +VIG K D
Sbjct: 118 LQPTGVLVTNGDYDREQFADN----QIPLLVIGTKLD 150
>sp|Q5ZKR4|RABL3_CHICK Rab-like protein 3 OS=Gallus gallus GN=RABL3 PE=2 SV=1
Length = 230
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 83/157 (52%), Gaps = 27/157 (17%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCHNQVLGNPSWTVGCSVDVRIHDYKEGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE----- 131
+ +++ELWD+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E
Sbjct: 58 KTYYIELWDVGGSVGSATSVKSTRAVFYNSLNGIILVHDLTNKKSSQNLYRWSLEALNRD 117
Query: 132 ------IATSGTFSAPLASGGPGGLPVPYVVIGNKAD 162
+ T+G + + +P +VIG K D
Sbjct: 118 VAPTGVLVTNGDYDREQFADN----QIPLLVIGTKLD 150
>sp|Q6GPS4|RABL3_XENLA Rab-like protein 3 OS=Xenopus laevis GN=rabl3 PE=2 SV=1
Length = 235
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 83/157 (52%), Gaps = 27/157 (17%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+V+VLV+GDSGVGK+SLV+L+ + PS T+GC+V V+ Y E
Sbjct: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRLHEYREGTP--------EE 57
Query: 81 RDFFVELWDISGH----ERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVE----- 131
+ ++ ELWD+ G K R++ Y+ +NG+I VHDL+ +++ +L +W++E
Sbjct: 58 KTYYTELWDVGGSVGSASSVKSTRAVFYNAVNGIILVHDLTNKKSSQNLYRWSLEALNRD 117
Query: 132 ------IATSGTFSAPLASGGPGGLPVPYVVIGNKAD 162
+ T+G + + +P +VIG K D
Sbjct: 118 LQPMGVLVTNGDYDREQFADN----QIPLLVIGTKLD 150
>sp|Q9XI98|RAG3E_ARATH Ras-related protein RABG3e OS=Arabidopsis thaliana GN=RABG3E PE=2
SV=1
Length = 206
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFEDLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD--AARQWVEKQGLLPSSE 194
P+VVIGNK DV G S +V AR W +G +P E
Sbjct: 116 --------ENFPFVVIGNKIDV------DGGSSRVVSEKKARAWCASKGNIPYYE 156
>sp|O24461|RAB7_PRUAR Ras-related protein Rab7 OS=Prunus armeniaca PE=2 SV=1
Length = 207
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 88/210 (41%), Gaps = 46/210 (21%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E T S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNNWREEFLIQATPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADV----------------AAKEG------TRGSSGNLVDA 179
P+VV+GNK DV A +G T G VD
Sbjct: 116 --------ENFPFVVLGNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDD 167
Query: 180 ARQWVEKQGLLPSSEE---LPLTESFPGGG 206
A Q + K L EE LP T GGG
Sbjct: 168 AFQCIAKNALNNEPEEEIYLPDTIDVAGGG 197
>sp|Q9XER8|RAB7_GOSHI Ras-related protein Rab7 OS=Gossypium hirsutum GN=RAB7 PE=2 SV=1
Length = 207
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQF-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + VHD++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVHDVNVMKSFDNLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
P+VV+GNK DV G + +V A+ W +G +P E
Sbjct: 116 --------ENFPFVVLGNKVDV------DGGNSRVVSEKKAKAWCASKGNIPYFE 156
>sp|P93267|RAB7_MESCR Ras-related protein Rab7A OS=Mesembryanthemum crystallinum PE=2
SV=1
Length = 207
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++++++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKIIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKELQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + +D++ ++ SL +W E + + P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLTYDVNVMKSFESLNRWREEFLIQASPADP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
P+V++GNK DV G SG +V A+ W +G +P E
Sbjct: 116 --------DNFPFVLLGNKIDV------DGGSGRVVSEKKAKAWCMSKGNIPYFE 156
>sp|P31022|RAB7_PEA Ras-related protein Rab7 OS=Pisum sativum PE=2 SV=1
Length = 206
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSVKSFDNLNNWREEFLIQANPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
P+VVIGNK D+ G + +V AR W +G +P E
Sbjct: 116 --------ENFPFVVIGNKIDI------DGGNSRVVSEKKARAWCAAKGNIPYFE 156
>sp|O23657|RABC1_ARATH Ras-related protein RABC1 OS=Arabidopsis thaliana GN=RABC1 PE=2
SV=1
Length = 212
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 28/162 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VL++GDSGVGK+SL+ L ++F S TIG VK++T G E+
Sbjct: 15 KVLLIGDSGVGKSSLL-LSFTSNTFDDLSPTIGVDFKVKYLTIG-------------EKK 60
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQK-WAVEIATSGTFSAP 141
+ +WD +G ER++ S Y G+I V+D+++R T T+L WA EI T
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDC 120
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQW 183
+ +++GNK D ++ G +D AR++
Sbjct: 121 IK-----------MLVGNKVDKESERAVSKKEG--IDFAREY 149
>sp|O04157|RAG3B_ARATH Ras-related protein RABG3b OS=Arabidopsis thaliana GN=RABG3B PE=1
SV=1
Length = 203
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 29/169 (17%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ SQ T+G +T ++ D +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVN----NKFSQQYKATIGADFVT--------KELQID-DR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ ++ SL W E T + P
Sbjct: 56 LVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNHLKSFESLDNWHNEFLTRASPRDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQG 188
+A P++++GNK D+ G + +V AR+W ++G
Sbjct: 116 MA--------FPFILLGNKVDID------GGNSRVVSEKKAREWCAEKG 150
>sp|Q9LS94|RAG3F_ARATH Ras-related protein RABG3f OS=Arabidopsis thaliana GN=RABG3F PE=2
SV=1
Length = 206
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 27/174 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD-AARQWVEKQGLLPSSE 194
P+V+IGNK DV G+S + + A+ W +G +P E
Sbjct: 116 --------ENFPFVLIGNKVDV-----DDGNSRVVSEKKAKAWCASKGNIPYFE 156
>sp|Q40787|RAB7_CENCI Ras-related protein Rab7 OS=Cenchrus ciliaris PE=2 SV=1
Length = 206
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
P+V++GNK DV G + +V A+ W +G +P E
Sbjct: 116 --------DNFPFVLLGNKVDV------DGGNSRVVSEKKAKAWCASKGNIPYFE 156
>sp|Q9C820|RAG3D_ARATH Ras-related protein RABG3d OS=Arabidopsis thaliana GN=RABG3D PE=2
SV=1
Length = 206
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 25/173 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQI-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 IFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
P+VV+GNK DV + S A+ W +G +P E
Sbjct: 116 --------ENFPFVVLGNKTDVDGGKSRVVSE----KKAKAWCASKGNIPYFE 156
>sp|Q63481|RAB7L_RAT Ras-related protein Rab-7L1 OS=Rattus norvegicus GN=Rab7l1 PE=2
SV=1
Length = 204
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + DSE
Sbjct: 9 KVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWS-----------DSEM- 56
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ Q+W ++ + T
Sbjct: 57 VRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G PVP +++ NK+D++
Sbjct: 113 ----PSGEPVPCLLLANKSDLS 130
>sp|Q54QR3|RB32A_DICDI Ras-related protein Rab-32A OS=Dictyostelium discoideum GN=rab32A
PE=1 SV=1
Length = 219
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 19/141 (13%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LVVGD G GKTS++ V TIG +K I + D + +
Sbjct: 17 KILVVGDIGTGKTSIIKRFVHNIFSMHYKSTIGVDFALKVINW------------DPKTE 64
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + G + D+++ T ++ KW +I + T+
Sbjct: 65 VRLQLWDIAGQERFGSMTRVYYKEAVGAMITFDVTRMSTFEAVAKWKADIDSKVTY---- 120
Query: 143 ASGGPGGLPVPYVVIGNKADV 163
G P+P V++ NK D+
Sbjct: 121 ---GADEKPIPVVLLANKCDL 138
>sp|Q32NQ0|RAB19_XENLA Ras-related protein Rab-19 OS=Xenopus laevis GN=rab19 PE=2 SV=1
Length = 213
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 46/230 (20%)
Query: 13 LNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSS 72
L P +++++GDS VGKT +V+ G TIG V+ S
Sbjct: 7 LEDDPFDFLFKIILIGDSNVGKTCVVHRFQSGIFMDNQQNTIGVDFTVR----------S 56
Query: 73 NSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEI 132
+I G + V++WD +G ER++ Y +G I +D+++R++ S+ W E
Sbjct: 57 LNINGKKVK---VQVWDTAGQERFRTITQSYYRSAHGAIIAYDITRRQSFESVPHWIYE- 112
Query: 133 ATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPS 192
+G G + +++GNK+D+A K L + A EK GLL
Sbjct: 113 -----------AGKYGAANLMLMLMGNKSDLAEKRQI------LFEEACTLAEKHGLLAV 155
Query: 193 SEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAP 242
E +AKE+ E + + LI R F +P
Sbjct: 156 LE---------------TSAKESHNVDEVFLLMAKELIARNTFHYHNESP 190
>sp|Q91YQ1|RAB7L_MOUSE Ras-related protein Rab-7L1 OS=Mus musculus GN=Rab7l1 PE=2 SV=1
Length = 204
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + DSE
Sbjct: 9 KVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWS-----------DSEM- 56
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ Q+W ++ + T
Sbjct: 57 VRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G PVP +++ NK+D++
Sbjct: 113 ----PSGEPVPCLLLANKSDLS 130
>sp|Q948K8|RAG3A_ARATH Ras-related protein RABG3a OS=Arabidopsis thaliana GN=RABG3A PE=2
SV=1
Length = 206
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 27/174 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + TIG K + G E+
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIG-------------EK 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ + Y + V+D++ R+ +L+ W E + S P
Sbjct: 56 LVTLQIWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD-AARQWVEKQGLLPSSE 194
P++V+GNK DV GSS + D A W G +P E
Sbjct: 116 KT--------FPFIVLGNKIDVDG-----GSSRVVSDKKAADWCASNGNIPYFE 156
>sp|Q9LW76|RAG3C_ARATH Ras-related protein RABG3c OS=Arabidopsis thaliana GN=RABG3C PE=2
SV=1
Length = 206
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 29/175 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQI-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
F +++WD +G ER++ Y + + V+D++ ++ +L W E + S P
Sbjct: 56 IFTLQIWDTAGQERFQSLGVAFYRGADCCVLVNDVNVMKSFENLNNWREEFLIQASPSDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSE 194
P+VV+GNK DV G +V A+ W +G +P E
Sbjct: 116 --------ENFPFVVLGNKTDV------DGGKSRVVTEKKAKSWCASKGNIPYFE 156
>sp|Q95UJ0|RAB7A_PAROT Ras-related protein Rab-7a OS=Paramecium octaurelia GN=Rab7a PE=1
SV=2
Length = 206
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 27/166 (16%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GDSGVGKTSL+N V + T+G K + +R
Sbjct: 10 KIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMI-------------DDRM 56
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y + + V+D++ ++ SL W E G P
Sbjct: 57 VTLQIWDTAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDP- 115
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQG 188
P+VV+GNK D A + + S A+QW + G
Sbjct: 116 -------EHFPFVVLGNKLDKATERKVQESK------AQQWCKSHG 148
>sp|Q28IZ3|RAB19_XENTR Ras-related protein Rab-19 OS=Xenopus tropicalis GN=rab19 PE=2 SV=1
Length = 213
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 93/230 (40%), Gaps = 46/230 (20%)
Query: 13 LNGGPPTGQVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSS 72
L P +++++GDS VGKT +V+ G TIG V+++
Sbjct: 7 LEDDPFDFLFKIILIGDSNVGKTCVVHRFQSGVFAHNQQNTIGVDFTVRNM--------- 57
Query: 73 NSIKGDSERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEI 132
+I G + V++WD +G ER++ Y +G I +D+++R++ S+ W E
Sbjct: 58 -NINGKKVK---VQVWDTAGQERFRTITQSYYRSAHGAIIAYDITRRQSFESVPHWIYE- 112
Query: 133 ATSGTFSAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPS 192
+ G + ++IGNK+D+A K L + A EK GLL
Sbjct: 113 -----------AEKYGAANLMMMLIGNKSDLAEKRQI------LFEEACTLAEKHGLLAV 155
Query: 193 SEELPLTESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAP 242
E +AKE+ E + + LI R F +P
Sbjct: 156 LE---------------TSAKESHNVDEVFLLMAKELIARNTFHYHSESP 190
>sp|Q9SJ11|RABG2_ARATH Ras-related protein RABG2 OS=Arabidopsis thaliana GN=RABG2 PE=1
SV=2
Length = 212
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 82/188 (43%), Gaps = 34/188 (18%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + TIG K + E+
Sbjct: 10 LKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHI-------------DEK 56
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ + Y + + V+D++ ++ +L W E P
Sbjct: 57 SVTLQIWDTAGQERFQSLGAAFYRGADCCVLVYDVNNLKSFETLNNWHTEFLKQANPMEP 116
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAAR--QWVEKQGLLP-----SSE 194
P+V+IGNK DV G + +V R +W +G +P + E
Sbjct: 117 ET--------FPFVLIGNKTDV------DGGNSRVVSNKRAIEWCGSKGNIPYHETSAKE 162
Query: 195 ELPLTESF 202
+ + E+F
Sbjct: 163 DTNIDEAF 170
>sp|Q9CZE3|RAB32_MOUSE Ras-related protein Rab-32 OS=Mus musculus GN=Rab32 PE=2 SV=3
Length = 223
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS
Sbjct: 25 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------DSRTL 72
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++ +
Sbjct: 73 VRLQLWDIAGQERFGNMTRVYYKEALGAFVVFDISRSSTFDAVLKWKNDLDSKVHL---- 128
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G P+P V++ NK D
Sbjct: 129 ----PNGSPIPAVLLANKCD 144
>sp|Q6DUB4|RAB7B_PAROT Ras-related protein Rab-7b OS=Paramecium octaurelia GN=Rab7b PE=1
SV=1
Length = 206
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 27/166 (16%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GDSGVGKTSL+N V + T+G K + +R
Sbjct: 10 KIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMI-------------DDRM 56
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ER++ Y + + V+D++ ++ SL W E G P
Sbjct: 57 VTLQIWDTAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDP- 115
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQG 188
P+VV+GNK D A + + S ++QW + G
Sbjct: 116 -------EHFPFVVLGNKLDKATERKVQESK------SQQWCKSHG 148
>sp|Q39573|YPTC5_CHLRE GTP-binding protein YPTC5 OS=Chlamydomonas reinhardtii GN=YPTC5
PE=3 SV=1
Length = 206
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 27/174 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V+ TIG K I ++
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVQKKFTKEYKATIGADFLTKEIEV-------------DDK 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ S Y + + V D++ ++ L W E
Sbjct: 56 KVTMQIWDTAGQERFQSLGSAFYRGADCCVLVFDVNNAKSFDDLDNWRDEFI-------- 107
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVD-AARQWVEKQGLLPSSE 194
+ +G P P++V+GNK D GSS + + A+ W +G +P E
Sbjct: 108 IQAGPPDPDNFPFMVLGNKIDENG-----GSSRQVSEKKAKAWCASKGSIPYFE 156
>sp|Q8QZZ8|RAB38_MOUSE Ras-related protein Rab-38 OS=Mus musculus GN=Rab38 PE=1 SV=1
Length = 211
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + S TIG +K + + D E
Sbjct: 11 KLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHW------------DPETV 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + T
Sbjct: 59 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTL---- 114
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G PV V++ NK D
Sbjct: 115 ----PNGKPVSVVLLANKCD 130
>sp|Q43463|RAB7_SOYBN Ras-related protein Rab7 OS=Glycine max PE=2 SV=1
Length = 206
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 30/196 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GDSGVGKTSL+N V + SQ T+G +T ++ D +R
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVH----KKFSQQYKATIGADFVT--------KELQID-DR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V+D++ ++ +L+ W E P
Sbjct: 56 LVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLKQANPPDP 115
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSEELPLT 199
A P++++GNK D+ G + +V A+ W +G +P E
Sbjct: 116 RA--------FPFILLGNKIDI------DGGNSRVVSEKKAKDWCAAKGNIPYFET-SAK 160
Query: 200 ESFPGGGGLIAAAKEA 215
E + + AK A
Sbjct: 161 EDYNVDAAFLCIAKAA 176
>sp|Q13637|RAB32_HUMAN Ras-related protein Rab-32 OS=Homo sapiens GN=RAB32 PE=1 SV=3
Length = 225
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS
Sbjct: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------DSRTL 74
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+S+ T ++ KW ++ +
Sbjct: 75 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHL---- 130
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G P+P V++ NK D
Sbjct: 131 ----PNGSPIPAVLLANKCD 146
>sp|Q5R7A4|RAB7L_PONAB Ras-related protein Rab-7L1 OS=Pongo abelii GN=RAB7L1 PE=2 SV=1
Length = 203
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + S ++
Sbjct: 9 KVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQW----SDYEIVR------ 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ Q+W ++ + T
Sbjct: 59 --LQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G PVP +++ NK D++
Sbjct: 113 ----PNGEPVPCLLLANKCDLS 130
>sp|O14966|RAB7L_HUMAN Ras-related protein Rab-7L1 OS=Homo sapiens GN=RAB7L1 PE=1 SV=1
Length = 203
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 20/142 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLVVGD+ VGKTSLV + S T+G +K + + S ++
Sbjct: 9 KVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQW----SDYEIVR------ 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + Y + + + D++ T ++ Q+W ++ + T
Sbjct: 59 --LQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL---- 112
Query: 143 ASGGPGGLPVPYVVIGNKADVA 164
P G PVP +++ NK D++
Sbjct: 113 ----PNGEPVPCLLLANKCDLS 130
>sp|Q1RMR4|RAB15_BOVIN Ras-related protein Rab-15 OS=Bos taurus GN=RAB15 PE=2 SV=1
Length = 212
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
R+L++GDSGVGKT L+ S TIG +K I + G R
Sbjct: 10 RLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTI----------EVDGIKVR- 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ERY+ Y + G+ V+D+S R+ + KW ++
Sbjct: 59 --IQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEY------- 109
Query: 143 ASGGPGGLPVPYVVIGNKADVAAK 166
P G V ++IGNKAD K
Sbjct: 110 ---APEG--VQKILIGNKADEEQK 128
>sp|P57729|RAB38_HUMAN Ras-related protein Rab-38 OS=Homo sapiens GN=RAB38 PE=1 SV=1
Length = 211
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
++LV+GD GVGKTS++ V + S TIG +K + + D E
Sbjct: 11 KLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHW------------DPETV 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G V D+++ T ++ KW ++ + +
Sbjct: 59 VRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLSL---- 114
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G PV V++ NK D
Sbjct: 115 ----PNGKPVSVVLLANKCD 130
>sp|Q8K386|RAB15_MOUSE Ras-related protein Rab-15 OS=Mus musculus GN=Rab15 PE=1 SV=1
Length = 212
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
R+L++GDSGVGKT L+ S TIG +K I + G R
Sbjct: 10 RLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTI----------DVDGIKVR- 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ERY+ Y + G+ V+D+S R+ + KW ++
Sbjct: 59 --IQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEY------- 109
Query: 143 ASGGPGGLPVPYVVIGNKADVAAK 166
P G V ++IGNKAD K
Sbjct: 110 ---APEG--VQKILIGNKADEEQK 128
>sp|Q948K6|RABG1_ARATH Ras-related protein RABG1 OS=Arabidopsis thaliana GN=RABG1 PE=2
SV=1
Length = 204
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 73/167 (43%), Gaps = 31/167 (18%)
Query: 21 QVRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSE 80
+++++++GDSGVGKTSL+ + TI + K I +E
Sbjct: 5 KLKIILLGDSGVGKTSLLKRYNDKDFKQLHNSTIYVDLVTKEICI-------------AE 51
Query: 81 RDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSA 140
R +++WD +G ER+K S Y + + V+D++ +T S+ W E
Sbjct: 52 RQVILQIWDTAGQERFKSLPSRFYRDTDCCVLVYDVNTLKTFESIDNWHDEFIKQANPET 111
Query: 141 PLASGGPGGLPVPYVVIGNKAD-------VAAKEGTR---GSSGNLV 177
P P+V++GNK D V AKE GS GN+V
Sbjct: 112 P--------TKFPFVLMGNKTDVNNGKPRVVAKEIADQWCGSKGNIV 150
>sp|P23640|RB27A_RAT Ras-related protein Rab-27A OS=Rattus norvegicus GN=Rab27a PE=1
SV=1
Length = 221
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 29/203 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++ L +GDSGVGKTS++ G S+ T+G K + Y ++G +G +
Sbjct: 10 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGTVGRG---Q 66
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ + + G + + DL+ ++ +++ W ++ P
Sbjct: 67 RIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENP 126
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
V+ GNK+D+ + + + AR+ EK G +P E+
Sbjct: 127 -----------DIVLCGNKSDLEDQRAVKE------EEARELAEKYG-------IPYFET 162
Query: 202 FPGGGGLIAAAKEARYDKEAVMK 224
G I+ A E D +MK
Sbjct: 163 SAANGTNISQAIEMLLD--LIMK 183
>sp|P36862|YPTV3_VOLCA GTP-binding protein yptV3 OS=Volvox carteri GN=YPTV3 PE=3 SV=1
Length = 203
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 27/161 (16%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VL+VGDSGVGK+ ++ G + TIG VK++T D +R
Sbjct: 11 KVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLT------------ADGKR- 57
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQ-KWAVEIATSGTFSAP 141
+ +WD +G ER++ S Y G+IFV+D+++R T SL+ W E T +
Sbjct: 58 CKLTIWDTAGQERFRTLTSSYYRGAQGIIFVYDVTRRDTFESLEANWMREFDIYSTVESA 117
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQ 182
+ +V+ NK D++A+ G+ D AR+
Sbjct: 118 IK-----------MVVANKVDLSAQRQVSSEEGH--DFARR 145
>sp|P35289|RAB15_RAT Ras-related protein Rab-15 OS=Rattus norvegicus GN=Rab15 PE=2 SV=1
Length = 212
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
R+L++GDSGVGKT L+ S TIG +K I + G R
Sbjct: 10 RLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTI----------EVDGIKVR- 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ERY+ Y + G+ V+D+S R+ + KW ++
Sbjct: 59 --IQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEY------- 109
Query: 143 ASGGPGGLPVPYVVIGNKADVAAK 166
P G V ++IGNKAD K
Sbjct: 110 ---APEG--VQKILIGNKADEEQK 128
>sp|P59190|RAB15_HUMAN Ras-related protein Rab-15 OS=Homo sapiens GN=RAB15 PE=1 SV=1
Length = 212
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
R+L++GDSGVGKT L+ S TIG +K I + G R
Sbjct: 10 RLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTI----------EVDGIKVR- 58
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
+++WD +G ERY+ Y + G+ V+D+S R+ + KW + +
Sbjct: 59 --IQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWV----------SDV 106
Query: 143 ASGGPGGLPVPYVVIGNKADVAAK 166
P G V ++IGNKAD K
Sbjct: 107 DEYAPEG--VQKILIGNKADEEQK 128
>sp|Q9FGK5|RAA5A_ARATH Ras-related protein RABA5a OS=Arabidopsis thaliana GN=RABA5A PE=2
SV=1
Length = 221
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 98/232 (42%), Gaps = 43/232 (18%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+++++GDS VGK++L+ + + TIG + + I G ++
Sbjct: 16 KIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKM----------DING---KE 62
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++WD +G ER++ S Y G + V+D+S+R+T S+ +W E+ T
Sbjct: 63 IKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHT-------- 114
Query: 143 ASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTESF 202
+ V +++GNK+D+ + G + E QGL E+
Sbjct: 115 ----HSDMNVVTILVGNKSDLKDLREVSTAEG------KALAEAQGLF-------FMETS 157
Query: 203 PGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAPNPWSISPTHKPI 254
+AAA E V + + +L R+ S E+ +P S+S K +
Sbjct: 158 ALDSSNVAAAFET-----VVKEIYNILSRKVMSSQELNKQDPASLSNGKKVV 204
>sp|Q9ERI2|RB27A_MOUSE Ras-related protein Rab-27A OS=Mus musculus GN=Rab27a PE=1 SV=1
Length = 221
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 29/203 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++ L +GDSGVGKTS++ G S+ T+G K + Y ++G +G +
Sbjct: 10 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVGRG---Q 66
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
++LWD +G ER++ + + G + + DL+ ++ +++ W ++ P
Sbjct: 67 RIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENP 126
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPLTES 201
V+ GNK+D+ + + + AR+ EK G +P E+
Sbjct: 127 -----------DIVLCGNKSDLEDQRAVKE------EEARELAEKYG-------IPYFET 162
Query: 202 FPGGGGLIAAAKEARYDKEAVMK 224
G I+ A E D +MK
Sbjct: 163 SAANGTNISHAIEMLLD--LIMK 183
>sp|Q41640|RAB7_VIGAC Ras-related protein Rab7 OS=Vigna aconitifolia PE=2 SV=1
Length = 206
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 86/196 (43%), Gaps = 30/196 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+V+GD+GVGKTSL+N V + SQ T+G +T ++ D +R
Sbjct: 9 LKVIVLGDTGVGKTSLMNQYVH----KKFSQQYKATIGADFVT--------KELQID-DR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + +D++ ++ +L W E
Sbjct: 56 LVTLQIWDTAGQERFQSLGVAFYRGADCCVLAYDVNVMKSFDTLDNWHEEFLKQ------ 109
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLV--DAARQWVEKQGLLPSSEELPLT 199
+ P P++++GNK D+ G + +V A+ W +G +P E
Sbjct: 110 --ANPPDPRSFPFILLGNKIDI------DGGNSRVVSEKKAKDWCASKGNIPYFET-SAK 160
Query: 200 ESFPGGGGLIAAAKEA 215
E F + AK A
Sbjct: 161 EDFNVDAAFLCIAKAA 176
>sp|Q06AU5|RAB32_PIG Ras-related protein Rab-32 OS=Sus scrofa GN=RAB32 PE=2 SV=1
Length = 226
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 23 RVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSERD 82
+VLV+G+ GVGKTS++ V TIG +K + + DS
Sbjct: 29 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------DSRTL 76
Query: 83 FFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAPL 142
++LWDI+G ER+ + + Y + G + V D+S+ ++ KW ++ +
Sbjct: 77 VRLQLWDIAGQERFGNMTRVYYKEAVGALVVFDISRGSPFEAVLKWKNDLDSKVHL---- 132
Query: 143 ASGGPGGLPVPYVVIGNKAD 162
P G P+P V++ NK D
Sbjct: 133 ----PNGSPIPAVLLANKCD 148
>sp|O97572|RAB7A_RABIT Ras-related protein Rab-7a OS=Oryctolagus cuniculus GN=RAB7A PE=2
SV=1
Length = 207
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 21/146 (14%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + V D++ T +L W +E F
Sbjct: 56 LVTMQIWDTAGQERFQSLSVAFYRGADCCVLVFDVTAPNTFKTLDSWRLE------FLIQ 109
Query: 142 LASGGPGGLPVPYVVIGNKADVAAKE 167
+ P P+VV+GNK D+ ++
Sbjct: 110 ASPRDPENF--PFVVLGNKIDLENRQ 133
>sp|Q99P74|RB27B_RAT Ras-related protein Rab-27B OS=Rattus norvegicus GN=Rab27b PE=2
SV=3
Length = 218
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 26/171 (15%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITY---GSSGSSSNSIKGD 78
+++L +GDSGVGKT+ + + T+G K + Y G+ GSS + K
Sbjct: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGSSGKAFK-- 67
Query: 79 SERDFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTF 138
++LWD +G ER++ + + G + + DL+ +++ +++ W ++ +
Sbjct: 68 ----VHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC 123
Query: 139 SAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGL 189
P V+IGNKAD+ + AR+ EK G+
Sbjct: 124 ENP-----------DIVLIGNKADLLDQREVNERQ------ARELAEKYGI 157
>sp|P36411|RAB7A_DICDI Ras-related protein Rab-7A OS=Dictyostelium discoideum GN=rab7A
PE=1 SV=1
Length = 203
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 29/174 (16%)
Query: 22 VRVLVVGDSGVGKTSLVNLIVKGSSFSRPSQTIGCTVGVKHITYGSSGSSSNSIKGDSER 81
++V+++GDSGVGKTSL+N V ++ TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKELMV-------------DDR 55
Query: 82 DFFVELWDISGHERYKDCRSILYSQINGVIFVHDLSQRRTKTSLQKWAVEIATSGTFSAP 141
+++WD +G ER++ Y + + +D++ +T +L W E
Sbjct: 56 VVTMQIWDTAGQERFQSLGVAFYRGADCCVLCYDVNVAKTFENLDSWRDEF--------- 106
Query: 142 LASGGPGGLP-VPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSE 194
L GP P+VV+GNK D+ E R S A W + +G +P E
Sbjct: 107 LIQAGPRDPDNFPFVVLGNKIDL---ENQRVVSQK---RAASWCQSKGNIPYFE 154
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.132 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 135,406,716
Number of Sequences: 539616
Number of extensions: 6103136
Number of successful extensions: 25076
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 414
Number of HSP's that attempted gapping in prelim test: 23794
Number of HSP's gapped (non-prelim): 954
length of query: 333
length of database: 191,569,459
effective HSP length: 118
effective length of query: 215
effective length of database: 127,894,771
effective search space: 27497375765
effective search space used: 27497375765
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)