Your job contains 1 sequence.
>019960
MRTTKGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKI
NERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRN
SHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACKP
MDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPATTDTMNQQEE
LTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRANRGLMPEASVAK
DLENPPSINQAMAKLRDVSSGEDSDHSQKRLRK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019960
(333 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2205455 - symbol:BIM2 "AT1G69010" species:3702... 670 7.4e-66 1
UNIPROTKB|Q6ZBQ2 - symbol:P0605H02.26 "BHLH protein famil... 528 8.3e-51 1
UNIPROTKB|Q69JI7 - symbol:OSJNBa0026C08.39-1 "BHLH protei... 512 4.1e-49 1
TAIR|locus:2152262 - symbol:BIM3 "AT5G38860" species:3702... 313 7.5e-42 2
UNIPROTKB|Q6Z339 - symbol:B1121A12.20 "Os02g0726700 prote... 273 5.8e-27 2
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 147 7.8e-09 1
TAIR|locus:2090847 - symbol:ICE1 "AT3G26744" species:3702... 123 3.5e-08 2
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 152 7.8e-08 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 148 1.4e-07 1
TAIR|locus:2117773 - symbol:AT4G28790 species:3702 "Arabi... 144 3.6e-07 1
TAIR|locus:4010713915 - symbol:AT4G28811 species:3702 "Ar... 144 5.8e-07 1
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 136 6.8e-07 2
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 139 7.5e-07 1
TAIR|locus:2828302 - symbol:AT2G40435 species:3702 "Arabi... 100 1.0e-06 2
UNIPROTKB|Q2R3F6 - symbol:Os11g0523700 "Helix-loop-helix ... 141 1.2e-06 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 138 2.0e-06 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 136 2.4e-06 1
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 137 3.3e-06 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 130 7.0e-06 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 132 8.3e-06 1
TAIR|locus:504954829 - symbol:GL3 "AT5G41315" species:370... 134 9.6e-06 1
UNIPROTKB|Q69Y51 - symbol:P0698A06.26-2 "Putative bHLH tr... 131 1.0e-05 1
UNIPROTKB|Q2QMM0 - symbol:LOC_Os12g40710 "Helix-loop-heli... 127 1.1e-05 1
TAIR|locus:2155725 - symbol:bHLH093 "AT5G65640" species:3... 111 1.2e-05 2
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 131 1.4e-05 1
UNIPROTKB|Q948Y2 - symbol:Plw-OSB2 "R-type basic helix-lo... 130 1.6e-05 1
TAIR|locus:4010713916 - symbol:AT4G28815 species:3702 "Ar... 127 1.7e-05 1
TAIR|locus:2093746 - symbol:FMA "AT3G24140" species:3702 ... 129 1.8e-05 1
TAIR|locus:2154197 - symbol:SPCH "AT5G53210" species:3702... 109 1.8e-05 2
UNIPROTKB|Q2QQ32 - symbol:LOC_Os12g32400 "Helix-loop-heli... 121 1.8e-05 1
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 131 1.9e-05 1
UNIPROTKB|Q53L62 - symbol:LOC_Os11g15210 "Helix-loop-heli... 129 2.1e-05 1
UNIPROTKB|Q84R60 - symbol:OSJNBb0113I20.8 "Putative ammon... 127 2.2e-05 1
UNIPROTKB|Q336V8 - symbol:Os10g0544200 "Os10g0544200 prot... 103 2.4e-05 2
UNIPROTKB|Q657A4 - symbol:P0022F12.30 "Regulatory protein... 127 2.4e-05 1
TAIR|locus:2146663 - symbol:BHLH101 "AT5G04150" species:3... 123 2.5e-05 1
TAIR|locus:2139484 - symbol:CIB1 "AT4G34530" species:3702... 126 2.6e-05 1
TAIR|locus:2123954 - symbol:AT4G29930 "AT4G29930" species... 122 4.2e-05 1
TAIR|locus:2065086 - symbol:AT2G40200 "AT2G40200" species... 121 5.0e-05 1
TAIR|locus:2147760 - symbol:LRL3 "AT5G58010" species:3702... 121 7.4e-05 1
TAIR|locus:2046198 - symbol:FRU "AT2G28160" species:3702 ... 121 8.6e-05 1
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 125 8.6e-05 1
TAIR|locus:2053766 - symbol:AT2G42300 "AT2G42300" species... 121 9.1e-05 1
TAIR|locus:2117788 - symbol:AT4G28800 species:3702 "Arabi... 122 0.00012 1
TAIR|locus:2142419 - symbol:AT5G10570 "AT5G10570" species... 114 0.00013 2
TAIR|locus:2062225 - symbol:AT2G22750 "AT2G22750" species... 119 0.00013 1
TAIR|locus:2074865 - symbol:HEC2 "AT3G50330" species:3702... 116 0.00014 1
TAIR|locus:2152551 - symbol:AT5G48560 "AT5G48560" species... 122 0.00014 1
TAIR|locus:2027809 - symbol:BEE3 "AT1G73830" species:3702... 117 0.00016 1
UNIPROTKB|Q8H8E4 - symbol:OJ1006F06.1 "Putative bHLH tran... 107 0.00016 2
TAIR|locus:2163163 - symbol:PIF7 "AT5G61270" species:3702... 119 0.00019 1
TAIR|locus:2141573 - symbol:FBH2 "AT4G09180" species:3702... 116 0.00021 1
TAIR|locus:2028804 - symbol:CIB5 "AT1G26260" species:3702... 119 0.00021 1
TAIR|locus:2155543 - symbol:HEC1 "HECATE 1" species:3702 ... 115 0.00022 1
TAIR|locus:2032990 - symbol:CES "AT1G25330" species:3702 ... 114 0.00022 1
UNIPROTKB|Q7XPS7 - symbol:OSJNBa0065O17.4 "OSJNBa0065O17.... 121 0.00023 1
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 118 0.00023 1
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 117 0.00023 1
TAIR|locus:2008693 - symbol:FBH1 "AT1G35460" species:3702... 115 0.00026 1
UNIPROTKB|Q2QLR0 - symbol:LOC_Os12g43620 "Helix-loop-heli... 117 0.00028 1
UNIPROTKB|Q69WS3 - symbol:OJ1118_E12.15 "Putative bHLH pr... 112 0.00028 2
TAIR|locus:2201906 - symbol:AT1G10120 "AT1G10120" species... 117 0.00032 1
UNIPROTKB|Q84LH4 - symbol:OSJNBb0011H13.2 "Putative Helix... 116 0.00033 1
UNIPROTKB|Q75M33 - symbol:P0668H12.5 "BHLH transcription ... 116 0.00036 1
UNIPROTKB|G3V2R5 - symbol:MAX "Protein max" species:9606 ... 95 0.00039 1
UNIPROTKB|Q6Z7E7 - symbol:P0020C11.18 "Putative bHLH tran... 118 0.00044 1
UNIPROTKB|Q67TR8 - symbol:B1342C04.6 "Basic helix-loop-he... 112 0.00046 1
TAIR|locus:2130619 - symbol:AT4G16430 "AT4G16430" species... 117 0.00047 1
TAIR|locus:2045263 - symbol:AT2G31730 species:3702 "Arabi... 104 0.00049 1
UNIPROTKB|G3V563 - symbol:MAX "Protein max" species:9606 ... 94 0.00050 1
UNIPROTKB|Q6V3B1 - symbol:MAX "MAX protein" species:9606 ... 94 0.00050 1
TAIR|locus:2118934 - symbol:RSL2 "AT4G33880" species:3702... 115 0.00050 1
UNIPROTKB|F1PX28 - symbol:SOHLH2 "Uncharacterized protein... 116 0.00053 1
UNIPROTKB|Q84T08 - symbol:OSJNBa0087C10.10 "BHLH transcri... 112 0.00055 2
TAIR|locus:2035609 - symbol:MYC2 "AT1G32640" species:3702... 118 0.00055 1
TAIR|locus:2126856 - symbol:IND "AT4G00120" species:3702 ... 109 0.00058 1
TAIR|locus:505006688 - symbol:AT5G50915 "AT5G50915" speci... 112 0.00073 1
TAIR|locus:2115200 - symbol:BEE2 "AT4G36540" species:3702... 112 0.00082 1
UNIPROTKB|Q6Z9R3 - symbol:P0461F06.33 "BHLH protein famil... 110 0.00086 1
TAIR|locus:2014144 - symbol:BEE1 "BR enhanced expression ... 110 0.00098 1
>TAIR|locus:2205455 [details] [associations]
symbol:BIM2 "AT1G69010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC011665 EMBL:BT002352 EMBL:AY080650 EMBL:AY086798
EMBL:AF488627 IPI:IPI00519398 PIR:E96714 RefSeq:NP_177064.1
UniGene:At.35458 ProteinModelPortal:Q9CAA4 SMR:Q9CAA4 PaxDb:Q9CAA4
PRIDE:Q9CAA4 EnsemblPlants:AT1G69010.1 GeneID:843233
KEGG:ath:AT1G69010 TAIR:At1g69010 eggNOG:NOG246683
HOGENOM:HOG000070523 InParanoid:Q9CAA4 OMA:YVQYLQE PhylomeDB:Q9CAA4
ProtClustDB:CLSN2682349 Genevestigator:Q9CAA4 GermOnline:AT1G69010
Uniprot:Q9CAA4
Length = 311
Score = 670 (240.9 bits), Expect = 7.4e-66, P = 7.4e-66
Identities = 148/281 (52%), Positives = 190/281 (67%)
Query: 1 MRTTKGNREEEDYEDDEFMSKKEA-ASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSK 59
MRT KGN+EEEDY +++F SK+E +SN T + +D K +DKAS IRSKHSVTEQRRRSK
Sbjct: 1 MRTGKGNQEEEDYGEEDFNSKREGPSSNTTVHSNRDSKENDKASAIRSKHSVTEQRRRSK 60
Query: 60 INERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWR 119
INERFQILRE+IP+S+QKRDTASFLLEVI+YVQYLQEKVQKYE SY WS EPTKL PWR
Sbjct: 61 INERFQILRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQKYEGSYPGWSQEPTKLTPWR 120
Query: 120 NSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACK 179
N+HWRVQ+ P AI NGSGPG FPGKF+DN+++ +P ++ Q P+ESD R I
Sbjct: 121 NNHWRVQSLGNHPVAINNGSGPGIPFPGKFEDNTVTSTPAIIAEPQIPIESDKARAITGI 180
Query: 180 PMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDA--QSNECPATTDTMNQ 237
++ QPE+ +KG+ PLQ LP + + P SD QSN+ T++
Sbjct: 181 SIESQPELDDKGLP---PLQPILPM-VQGEQANECPA---TSDGLGQSNDLVIEGGTISI 233
Query: 238 QEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQ-AN 277
+ E + ++ + G+ +L+QA S IDL + AN
Sbjct: 234 SSAYSHELLSSLTQALQNAGI--DLSQAKLSVQIDLGKRAN 272
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 93/250 (37%), Positives = 133/250 (53%)
Query: 87 VIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFATQP---HAIKNGSGPGS 143
++E + Y+Q +K + Y+ S P + + WR ++ Q H + +G G
Sbjct: 85 LLEVIDYVQYLQEKVQ-KYEG-SYPGWSQEPTKLTPWRNNHWRVQSLGNHPVAINNGSGP 142
Query: 144 MFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACKPMDRQPEVANKGISI-SMPLQGNL 202
P F +TST + ++P P++ A GISI S P +
Sbjct: 143 GIP--FPGK---FEDNTVTSTPAII-AEPQI-----PIESDKARAITGISIESQPELDDK 191
Query: 203 PAPARSDSVLLHPLQRPVSDAQSNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNNL 262
P L P+ V Q+NECPAT+D + Q +L +EGGTI+ISS YS LL++L
Sbjct: 192 GLPP------LQPILPMVQGEQANECPATSDGLGQSNDLVIEGGTISISSAYSHELLSSL 245
Query: 263 TQALESAGIDLSQANISVQIDLGKRANRGLMPEASVAKDLENPPSINQAMAKLRDVSSGE 322
TQAL++AGIDLSQA +SVQIDLGKRAN+GL E +K NP S + + RD S E
Sbjct: 246 TQALQNAGIDLSQAKLSVQIDLGKRANQGLTHEEPSSK---NPLSYD---TQGRDSSVEE 299
Query: 323 DSDHSQKRLR 332
+S+HS KR++
Sbjct: 300 ESEHSHKRMK 309
>UNIPROTKB|Q6ZBQ2 [details] [associations]
symbol:P0605H02.26 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 ProtClustDB:CLSN2697427 EMBL:HQ858865 EMBL:AP004620
EMBL:AK100183 RefSeq:NP_001062109.1 UniGene:Os.5093 STRING:Q6ZBQ2
EnsemblPlants:LOC_Os08g38210.1 GeneID:4345899 KEGG:osa:4345899
OMA:KPTHDFL Uniprot:Q6ZBQ2
Length = 508
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 144/344 (41%), Positives = 202/344 (58%)
Query: 14 EDDEFMSKKEAASNITNSNAK-DGKN---SDKA------SVIRSKHSVTEQRRRSKINER 63
+DD +++E +S++ + +GK S A + RSKHS TEQRRRSKIN+R
Sbjct: 181 DDDGHAARREVSSSLKELTVRVEGKGGSCSGSAGTDQMPNTPRSKHSATEQRRRSKINDR 240
Query: 64 FQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRN--- 120
FQ+LR+++PH+DQKRD ASFLLEVIEY+++LQEKVQKYEVSY +W+ E K++PW N
Sbjct: 241 FQLLRDLLPHNDQKRDKASFLLEVIEYIRFLQEKVQKYEVSYPEWNQENAKVVPWTNIYF 300
Query: 121 -SHWR-VQNFATQP--HA------IKNGSGPGSMFP--GKFDDNSISMSPTMLTSTQTPV 168
S W+ QN P H+ +KNGS P MFP G D+N+ ++ + Q
Sbjct: 301 RSSWKNAQNKGQVPADHSPDPPELLKNGS-P-YMFPFTGNSDNNN-AVETAAASGAQDQA 357
Query: 169 ESDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNEC 228
E+DP M R V+ + S+ P N+ +D V P + V + +
Sbjct: 358 ETDP--------MSR---VSYR--SVDTPSPNNV-----ADKVTSQPHAQLVRPSPAENH 399
Query: 229 PATTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRA 288
D +N + L ++ GTI++SS YSQ LLN L ALE++GIDLSQA+ISVQI+LGKRA
Sbjct: 400 TVNCDKLNNSD-LAIDEGTISLSSQYSQELLNKLNHALENSGIDLSQASISVQINLGKRA 458
Query: 289 NRGLMPEA-SVAKDLENPPSINQAMAK-LRDVSSGEDSDHSQKR 330
+ P A S +K+L +P S +QAM + LR E+ + KR
Sbjct: 459 MKRSTPAATSTSKELTDPASNSQAMGRQLRLGDGAEEHRQASKR 502
>UNIPROTKB|Q69JI7 [details] [associations]
symbol:OSJNBa0026C08.39-1 "BHLH protein family-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008215 EMBL:CM000146 EMBL:EU837261 EMBL:AP006169
EMBL:AP005759 RefSeq:NP_001063459.1 UniGene:Os.16741
EnsemblPlants:LOC_Os09g29930.1 GeneID:4347359 KEGG:osa:4347359
OMA:HNIVTSA ProtClustDB:CLSN2697427 Uniprot:Q69JI7
Length = 504
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 133/342 (38%), Positives = 193/342 (56%)
Query: 14 EDDEFMSKKEAASNITNSNAK-DGKNSD--------KASVIRSKHSVTEQRRRSKINERF 64
+DD +++E +S++ + DGK + S RSKHS TEQRRRSKIN+RF
Sbjct: 178 DDDGVAARREVSSSLKELTVRVDGKGGSCSGSGTDQRPSSPRSKHSATEQRRRSKINDRF 237
Query: 65 QILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRN---- 120
QILRE++PHSDQKRD A+FLLEVIEY+++LQEKVQK+E S +W+ E K++PW N
Sbjct: 238 QILRELLPHSDQKRDKATFLLEVIEYIRFLQEKVQKFEASVPEWNQENAKILPWSNIYFR 297
Query: 121 SHWR-VQNFATQP--------HAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESD 171
S W+ Q+ P I+NGS G F GK DDN ++ + Q VE+D
Sbjct: 298 SFWKNSQSKGQNPGDDLPDPSQFIRNGSSSGYNFTGKPDDNHNMVTSAAASGAQELVETD 357
Query: 172 PNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPAT 231
++ + + + N +++ Q +PA D +C
Sbjct: 358 HAASVSYRSAETPTNITN---NVTSQAQAQWASPAGVD-----------------DCAMN 397
Query: 232 TDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRA-NR 290
++ +N Q+ L ++ GTI++SS YSQ LL LT ALES+G+DLSQ++ISVQI+LGKRA R
Sbjct: 398 SEMLNNQQ-LAIDEGTISLSSQYSQQLLGTLTHALESSGVDLSQSSISVQINLGKRAVKR 456
Query: 291 GLMPEASVAKDLENPPSINQAMA-KLRDVSSG-EDSDHSQKR 330
+S +K+L + + N+ M +L + G E+ H KR
Sbjct: 457 PGADGSSSSKELPSTSANNENMGHQLTMLGGGTEELPHPTKR 498
>TAIR|locus:2152262 [details] [associations]
symbol:BIM3 "AT5G38860" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000070523 EMBL:AB009048 EMBL:AJ630499 EMBL:AY568671
EMBL:BT033131 IPI:IPI00534511 RefSeq:NP_198702.2 UniGene:At.50495
ProteinModelPortal:Q9FMB6 SMR:Q9FMB6 IntAct:Q9FMB6 PRIDE:Q9FMB6
EnsemblPlants:AT5G38860.1 GeneID:833877 KEGG:ath:AT5G38860
TAIR:At5g38860 eggNOG:NOG267159 InParanoid:Q9FMB6 OMA:TETRSFC
PhylomeDB:Q9FMB6 ProtClustDB:CLSN2918639 Genevestigator:Q9FMB6
Uniprot:Q9FMB6
Length = 298
Score = 313 (115.2 bits), Expect = 7.5e-42, Sum P(2) = 7.5e-42
Identities = 75/163 (46%), Positives = 97/163 (59%)
Query: 15 DDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHS 74
DD+ + + SN+ + N ++ S RSKHS TEQRRRSKINERFQ L +IIP +
Sbjct: 7 DDQL--EADVYSNLPSRNDSSTGRRNRNSC-RSKHSETEQRRRSKINERFQSLMDIIPQN 63
Query: 75 --DQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFATQP 132
DQKRD ASFLLEVIEY+ +LQEKV YE S+Q W PTKL+PWRNSH V P
Sbjct: 64 QNDQKRDKASFLLEVIEYIHFLQEKVHMYEDSHQMWYQSPTKLIPWRNSHGSVAEENDHP 123
Query: 133 HAIKNGSGPGSMFP--GKFDDNSISMSPTMLTSTQTPV-ESDP 172
+K+ S + G D S++P + ++ T + E P
Sbjct: 124 QIVKSFSSNDKVAASSGFLLDTYNSVNPDIDSAVSTKIPEHSP 166
Score = 147 (56.8 bits), Expect = 7.5e-42, Sum P(2) = 7.5e-42
Identities = 45/143 (31%), Positives = 73/143 (51%)
Query: 193 SISMPLQGNLPAPARSDSVLLHP-LQRPVSDAQSNECPATTDTMNQQEELTVEGGT-INI 250
++S + + P A S + P LQ D + T E LT + T ++
Sbjct: 156 AVSTKIPEHSPVSAVSSYLRTEPSLQFVQHDFWQPKTSCGTINCFTNELLTSDEKTSASL 215
Query: 251 SSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRANRGLMPEASVAKDLENPPSINQ 310
S++ SQ +LN LT+AL+S+G+++S+ ISVQ+ L KR +R A ++D N + +
Sbjct: 216 STVCSQRVLNTLTEALKSSGVNMSETMISVQLSLRKREDREYSVAAFASEDNGNSIADEE 275
Query: 311 AMAKLRDVSSGEDSDHSQKRLRK 333
+ S D DHSQKR+R+
Sbjct: 276 GDSPTETRSFCNDIDHSQKRIRR 298
>UNIPROTKB|Q6Z339 [details] [associations]
symbol:B1121A12.20 "Os02g0726700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
EMBL:AP008208 EMBL:AP005284 RefSeq:NP_001047993.1 UniGene:Os.52592
GeneID:4330593 KEGG:osa:4330593 ProtClustDB:CLSN2919237
Uniprot:Q6Z339
Length = 344
Score = 273 (101.2 bits), Expect = 5.8e-27, Sum P(2) = 5.8e-27
Identities = 76/212 (35%), Positives = 111/212 (52%)
Query: 29 TNSNAKDGKNS-DKA-SVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLE 86
T + + +S D+ S RSKHS TEQRRR+KIN+R +ILRE++PH+DQKRD ASFL E
Sbjct: 128 TRAEGRSSASSADQGPSTPRSKHSATEQRRRTKINDRLEILRELLPHTDQKRDKASFLSE 187
Query: 87 VIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRN----SHWRVQNFATQPHAIKNGSGPG 142
VIEY+++LQEKVQKYE + + + E +K MPW S WR +Q
Sbjct: 188 VIEYIRFLQEKVQKYEEADPERNHEDSKSMPWAKVYYRSCWRNTKNTSQVQGEDLSPSTQ 247
Query: 143 SMFPGKFDDNSISMSPTMLTSTQ--TPVESDPNRDIACKP--MDRQPEVANKG--ISISM 196
M ++ IS + L +TQ T + + P +++ +N+ +S+S
Sbjct: 248 DMNNEQYGPKHISAAQPALFNTQSVTSTTTSSSHMATGTPQNLEKNSTPSNQPPWLSMST 307
Query: 197 PLQGNLPA---PARSDSVLLHPLQRPVSDAQS 225
Q + P P + + LH +S A S
Sbjct: 308 MRQESEPGNKMPNKHEKQTLHDENHSISSAYS 339
Score = 45 (20.9 bits), Expect = 5.8e-27, Sum P(2) = 5.8e-27
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 236 NQQEELTVEGGTINISSIYSQG 257
N+ E+ T+ +ISS YSQG
Sbjct: 320 NKHEKQTLHDENHSISSAYSQG 341
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 147 (56.8 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 45/134 (33%), Positives = 73/134 (54%)
Query: 31 SNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEY 90
S AK +NS K ++ H+++E++RRSKINE+ + L+++IP+S+ K D AS L E IEY
Sbjct: 81 SGAKQ-RNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSN-KTDKASMLDEAIEY 138
Query: 91 VQYLQEKVQKYEVSYQDWSAEPTKL--MPWRNSHWRVQNFATQPHAIKNG-SGPGSMFPG 147
++ LQ +VQ V P +L +P +H R+ Q ++ + P S+ P
Sbjct: 139 LKQLQLQVQTLAVM-NGLGLNPMRLPQVP-PPTHTRINETLEQDLNLETLLAAPHSLEPA 196
Query: 148 KFDDNSISMSPTML 161
K + T+L
Sbjct: 197 KTSQGMCFSTATLL 210
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 123 (48.4 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 33/110 (30%), Positives = 56/110 (50%)
Query: 12 DYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREII 71
+YE DE +AA ++ GK K + +K+ + E+RRR K+N+R +LR ++
Sbjct: 275 NYESDEINESGKAAESVQIGGG--GKGKKKG--MPAKNLMAERRRRKKLNDRLYMLRSVV 330
Query: 72 PHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNS 121
P K D AS L + I+Y++ L +++ + S P L P +S
Sbjct: 331 PKIS-KMDRASILGDAIDYLKELLQRINDLHNELE--STPPGSLPPTSSS 377
Score = 75 (31.5 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 29/87 (33%), Positives = 43/87 (49%)
Query: 200 GNLPAPARSDSVLLHPLQRPVSDAQSNE-CPATTDT-MNQQEELTV---EGGTINISSIY 254
G+LP P S L P + +S E CP++ + QQ + V EG +NI
Sbjct: 369 GSLP-PTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIHMFC 427
Query: 255 SQ--GLLNNLTQALESAGIDLSQANIS 279
+ GLL +AL++ G+D+ QA IS
Sbjct: 428 GRRPGLLLATMKALDNLGLDVQQAVIS 454
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 152 (58.6 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 44/117 (37%), Positives = 63/117 (53%)
Query: 34 KDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQY 93
K G S K S H+++E+RRR +INE+ + L+E+IP+ + K D AS L E IEY++
Sbjct: 302 KSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCN-KIDKASMLDEAIEYLKT 360
Query: 94 LQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFATQPHAIKNGSGPGSMFPGKFD 150
LQ +VQ +S P L+P H ++ A PH + G G G G FD
Sbjct: 361 LQLQVQM--MSMGTGLCIPPMLLPTAMQHLQIPPMAHFPH-LGMGLGYGM---GVFD 411
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 148 (57.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 37/97 (38%), Positives = 58/97 (59%)
Query: 3 TTKGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINE 62
TT R+ ++ D E +S +A N +N + + S A V H+++E+RRR +INE
Sbjct: 221 TTDRKRKRINHTD-ESVSLSDAIGNKSNQRSGSNRRSRAAEV----HNLSERRRRDRINE 275
Query: 63 RFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
R + L+E+IPH K D AS L E I+Y++ LQ ++Q
Sbjct: 276 RMKALQELIPHCS-KTDKASILDEAIDYLKSLQLQLQ 311
>TAIR|locus:2117773 [details] [associations]
symbol:AT4G28790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 EMBL:BT015828
EMBL:BT020214 IPI:IPI00521625 IPI:IPI00529771 IPI:IPI00915578
PIR:T04520 RefSeq:NP_194608.3 RefSeq:NP_974634.1 UniGene:At.31988
ProteinModelPortal:Q9SVU6 SMR:Q9SVU6 PRIDE:Q9SVU6
EnsemblPlants:AT4G28790.1 GeneID:829000 KEGG:ath:AT4G28790
TAIR:At4g28790 HOGENOM:HOG000240264 InParanoid:Q9SVU6
PhylomeDB:Q9SVU6 ProtClustDB:CLSN2680993 Genevestigator:Q9SVU6
Uniprot:Q9SVU6
Length = 413
Score = 144 (55.7 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 31/92 (33%), Positives = 54/92 (58%)
Query: 16 DEFMSKKEAASNITNSNAKDGKNSDKASVIRSK--HSVTEQRRRSKINERFQILREIIPH 73
DE K +N+ N ++ ++S + R+ H ++E+RRR KINE + L+E++P
Sbjct: 247 DERKRKTREETNVENQGTEEARDSTSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPR 306
Query: 74 SDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
K D +S L +VIEYV+ LQ ++Q + + +
Sbjct: 307 CT-KTDRSSMLDDVIEYVKSLQSQIQMFSMGH 337
>TAIR|locus:4010713915 [details] [associations]
symbol:AT4G28811 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
HOGENOM:HOG000240264 EMBL:AJ519811 IPI:IPI00518617 PIR:H85335
PIR:T04518 RefSeq:NP_001078462.1 UniGene:At.46149
ProteinModelPortal:Q8GT73 SMR:Q8GT73 PRIDE:Q8GT73
EnsemblPlants:AT4G28811.1 GeneID:5008170 KEGG:ath:AT4G28811
TAIR:At4g28811 eggNOG:NOG314238 PhylomeDB:Q8GT73
ProtClustDB:CLSN2699107 Genevestigator:Q8GT73 Uniprot:Q8GT73
Length = 544
Score = 144 (55.7 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 44/144 (30%), Positives = 67/144 (46%)
Query: 10 EEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILRE 69
E + + E ++E + I + G S K S H+++E+RRR +INER + L+E
Sbjct: 323 ERETKITEDKKREETIAEIQGTEEAHGSTSRKRSRAADMHNLSERRRRERINERMKTLQE 382
Query: 70 IIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFA 129
++P +K D S L +VIEYV+ LQ ++Q + + +MP Q F
Sbjct: 383 LLPRC-RKTDKVSMLEDVIEYVKSLQLQIQMMSMGHG--------MMPPMMHEGNTQQF- 432
Query: 130 TQPHAIKNGSG-----PGSMFPGK 148
PH G P FPGK
Sbjct: 433 -MPHMAMGMKGMNRPPPFVPFPGK 455
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 136 (52.9 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 46/182 (25%), Positives = 82/182 (45%)
Query: 3 TTKGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNS--DKASVIRSKHSVTEQRRRSKI 60
T+ G+ + + D + + A GK+S K S + H+ +E++RR KI
Sbjct: 171 TSMGSHDNTIDDHDSVCHSRPQMEDEEEKKA-GGKSSVSTKRSRAAAIHNQSERKRRDKI 229
Query: 61 NERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRN 120
N+R + L++++P+S K D AS L EVIEY++ LQ +VS P+ ++P
Sbjct: 230 NQRMKTLQKLVPNSS-KTDKASMLDEVIEYLKQLQA-----QVSMMSRMNMPSMMLPMAM 283
Query: 121 SHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACKP 180
+ + + + G G G G D NS++ + + + +P + C
Sbjct: 284 QQQQQLQMSLMSNPMGLGMGMGMPGLGLLDLNSMNRAAASAPNIHANMMPNPFLPMNCPS 343
Query: 181 MD 182
D
Sbjct: 344 WD 345
Score = 45 (20.9 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 165 QTPVESDP-NRDIACKPMDRQPEVANKGISISMPLQGNLPAPA 206
Q+P+ DP + +AC E ++ ++ +Q LP P+
Sbjct: 354 QSPLIPDPMSAFLACSTQPTTMEAYSRMATLYQQMQQQLPPPS 396
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 139 (54.0 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 35/80 (43%), Positives = 50/80 (62%)
Query: 20 SKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRD 79
S+ EAA+ K S A V H+++E+RRRSKINE+ + L+ +IP+S+ K D
Sbjct: 83 SEPEAAAGARPRGGSGSKRSRAAEV----HNLSEKRRRSKINEKMKALQSLIPNSN-KTD 137
Query: 80 TASFLLEVIEYVQYLQEKVQ 99
AS L E IEY++ LQ +VQ
Sbjct: 138 KASMLDEAIEYLKQLQLQVQ 157
>TAIR|locus:2828302 [details] [associations]
symbol:AT2G40435 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] GO:GO:0005739 EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC002336 EMBL:AC007020
eggNOG:NOG299058 OMA:MDASKYI ProtClustDB:CLSN2693906 EMBL:AY227635
EMBL:AY649272 EMBL:AK220685 IPI:IPI00531488 RefSeq:NP_565932.1
UniGene:At.37051 ProteinModelPortal:Q8RUZ5 SMR:Q8RUZ5 PRIDE:Q8RUZ5
EnsemblPlants:AT2G40435.1 GeneID:818637 KEGG:ath:AT2G40435
TAIR:At2g40435 HOGENOM:HOG000241360 InParanoid:Q8RUZ5
PhylomeDB:Q8RUZ5 ArrayExpress:Q8RUZ5 Genevestigator:Q8RUZ5
Uniprot:Q8RUZ5
Length = 158
Score = 100 (40.3 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 21/65 (32%), Positives = 44/65 (67%)
Query: 51 VTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKY--EVSYQDW 108
V+ +++R + E+FQ+LR I +S + DT S +++ +Y+Q L++KV+++ + + +
Sbjct: 2 VSREQKRGSLQEKFQLLRSIT-NSHAENDT-SIIMDASKYIQKLKQKVERFNQDPTAEQS 59
Query: 109 SAEPT 113
S+EPT
Sbjct: 60 SSEPT 64
Score = 63 (27.2 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 32/111 (28%), Positives = 51/111 (45%)
Query: 217 QRPVSDAQSNECPATTDTMNQQEELTVEGGTINISSIYSQ-GLLNNLTQALESAGIDLSQ 275
Q P ++ S+E P T E +G IN+ S +Q G+L ++ +A E G+++ +
Sbjct: 52 QDPTAEQSSSE-PTDPKTPMVTVETLDKGFMINVFSGKNQPGMLVSVLEAFEDIGLNVLE 110
Query: 276 ANISVQIDLGKRANRGLMPEASVAKDLENPPSINQAMAK-LRDVSSGEDSD 325
A S A GL E D E ++ QA+ +R S GE +D
Sbjct: 111 ARASCTDSFSLHA-MGLENEDGENMDAE---AVKQAVTDAIR--SWGEIND 155
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 44/140 (31%), Positives = 69/140 (49%)
Query: 7 NREEEDYEDDEFM-SKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQ 65
N + ED E +KKE+ +N T + DGK K + +K+ + E+RRR K+N+R
Sbjct: 298 NYDSEDARGGEDSGAKKESNANSTVTG--DGKGKKKG--MPAKNLMAERRRRKKLNDRLY 353
Query: 66 ILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNS-HWR 124
+LR ++P K D AS L + IEY++ L +K+ + + S + L P S H
Sbjct: 354 MLRSVVPKIS-KMDRASILGDAIEYLKELLQKINDLQNELES-SPATSSLPPTPTSFHPL 411
Query: 125 VQNFATQPHAIKNGSGPGSM 144
T P IK P ++
Sbjct: 412 TPTLPTLPSRIKEEICPSAL 431
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 138 (53.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 33/90 (36%), Positives = 55/90 (61%)
Query: 15 DDEFMSKKEAASNITNSNAKDGKNSDKA-SVIRSK----HSVTEQRRRSKINERFQILRE 69
D E +S+ + T+ K+S ++ S RS+ H+++E+RRR +INER + L+E
Sbjct: 222 DQESVSQSDIGLTSTDDQTMGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQE 281
Query: 70 IIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+IPH + D AS L E I+Y++ LQ ++Q
Sbjct: 282 LIPHCS-RTDKASILDEAIDYLKSLQMQLQ 310
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 136 (52.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 36/97 (37%), Positives = 60/97 (61%)
Query: 6 GNREEE-DYEDDEFMSK--KEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINE 62
GN +E D E +E EA S+ + +++ +A+ + H+++E+RRRS+INE
Sbjct: 159 GNETDEYDCESEEGGEAVVDEAPSSKSGPSSRSSSKRCRAAEV---HNLSEKRRRSRINE 215
Query: 63 RFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+ + L+ +IP+S+ K D AS L E IEY++ LQ +VQ
Sbjct: 216 KMKALQSLIPNSN-KTDKASMLDEAIEYLKQLQLQVQ 251
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 137 (53.3 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 39/113 (34%), Positives = 63/113 (55%)
Query: 11 EDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREI 70
ED E++ +KEA + T +K S A V H+++E+RRR +INE+ + L+E+
Sbjct: 317 EDVEEESGDGRKEAGPSRTGLGSK---RSRSAEV----HNLSERRRRDRINEKMRALQEL 369
Query: 71 IPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHW 123
IP+ + K D AS L E IEY++ LQ +VQ ++ + P + P H+
Sbjct: 370 IPNCN-KVDKASMLDEAIEYLKSLQLQVQIMSMA-SGYYLPPAVMFPPGMGHY 420
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 130 (50.8 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 33/86 (38%), Positives = 52/86 (60%)
Query: 14 EDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPH 73
E +E + E+ + + GK S A V H+++E+RRRS+INE+ + L+ +IP+
Sbjct: 7 ESEEALGSSESEQPTRPARPR-GKRSRAAEV----HNLSEKRRRSRINEKMKALQSLIPN 61
Query: 74 SDQKRDTASFLLEVIEYVQYLQEKVQ 99
S K D AS L + IEY++ LQ +VQ
Sbjct: 62 SS-KTDKASMLDDAIEYLKQLQLQVQ 86
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 132 (51.5 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 31/80 (38%), Positives = 48/80 (60%)
Query: 20 SKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRD 79
S E A S K +A+ + H+++E+RRR +INE+ + L+E++PH + K D
Sbjct: 207 SLSEVADETRPSKRPAAKRRTRAAEV---HNLSERRRRDRINEKLRALQELVPHCN-KTD 262
Query: 80 TASFLLEVIEYVQYLQEKVQ 99
AS L E IEY++ LQ +VQ
Sbjct: 263 KASILDEAIEYLKSLQMQVQ 282
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 134 (52.2 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 36/105 (34%), Positives = 52/105 (49%)
Query: 38 NSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEK 97
+S +A H+V E++RR K+NERF LR+IIP S K D S L + IEY+Q L+ +
Sbjct: 431 DSPEARDETGNHAVLEKKRREKLNERFMTLRKIIP-SINKIDKVSILDDTIEYLQELERR 489
Query: 98 VQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFATQPHAIKNGSGPG 142
VQ+ E + E M + T + N +G G
Sbjct: 490 VQELESCRESTDTETRGTMTMKRKKPCDAGERTSANCANNETGNG 534
>UNIPROTKB|Q69Y51 [details] [associations]
symbol:P0698A06.26-2 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP003514
ProteinModelPortal:Q69Y51 EnsemblPlants:LOC_Os06g09370.3
Gramene:Q69Y51 HOGENOM:HOG000241730 Uniprot:Q69Y51
Length = 401
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 48/181 (26%), Positives = 84/181 (46%)
Query: 20 SKKEAASNITNSNAKDGKNSDKA--SVIRSKHSVTEQRRRSKINERFQILREIIPHSDQK 77
S E +N N+ + K +A HS+ E+ RR KI+ER + L+ ++P+S+ K
Sbjct: 219 SDVEPQANSAPGNSANAKPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSN-K 277
Query: 78 RDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPW-RNSHWRVQ-NFATQPHAI 135
D AS L E+I+YV++LQ +V+ +S P ++P R S N + I
Sbjct: 278 ADKASMLDEIIDYVKFLQLQVKVLSMSRL---GAPGAVLPLLRESQTECHSNPSLSASTI 334
Query: 136 KNGSG--PGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACKPMDRQPEVAN-KGI 192
G P S F+ + + T + S ++ N+ + P+ ++N KG+
Sbjct: 335 SQGPPDMPDSEDSSAFEQEVVKLMETSIISAMQYLQ---NKGLCLMPIALASAISNQKGM 391
Query: 193 S 193
+
Sbjct: 392 A 392
>UNIPROTKB|Q2QMM0 [details] [associations]
symbol:LOC_Os12g40710 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 Gramene:Q2QMM0 Uniprot:Q2QMM0
Length = 266
Score = 127 (49.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 31/93 (33%), Positives = 53/93 (56%)
Query: 7 NREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQI 66
N++E + E KK+ AS+ K ++ A H++TE+RRR KI ERF+
Sbjct: 52 NKDEASDDSGERKKKKKKASSAAG---KASRHRHAAGA----HNLTEKRRRFKITERFRT 104
Query: 67 LREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
L+ ++P D K + AS L + I+Y++ LQ +++
Sbjct: 105 LQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLE 137
>TAIR|locus:2155725 [details] [associations]
symbol:bHLH093 "AT5G65640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB026639 HOGENOM:HOG000029066 EMBL:AF488621 EMBL:BT025665
EMBL:AK229018 EMBL:AY085134 IPI:IPI00533579 IPI:IPI00785991
RefSeq:NP_001078801.1 RefSeq:NP_569014.1 UniGene:At.28897
ProteinModelPortal:Q9LSL1 SMR:Q9LSL1 EnsemblPlants:AT5G65640.1
GeneID:836690 KEGG:ath:AT5G65640 TAIR:At5g65640 eggNOG:NOG245311
InParanoid:Q9LSL1 OMA:PLMESDQ PhylomeDB:Q9LSL1
ProtClustDB:CLSN2686406 Genevestigator:Q9LSL1 Uniprot:Q9LSL1
Length = 351
Score = 111 (44.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 37 KNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQE 96
K S K SK+ + E+RRR ++N+R +LR I+P K D S L + I+Y++ L +
Sbjct: 167 KKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKIS-KMDRTSILGDAIDYMKELLD 225
Query: 97 KVQKYEVSYQD 107
K+ K + Q+
Sbjct: 226 KINKLQDEEQE 236
Score = 59 (25.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 22/93 (23%), Positives = 40/93 (43%)
Query: 220 VSDAQSNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANIS 279
+ D +NE P ++ + + E ++I GLL + LE+ G+++ Q IS
Sbjct: 252 LKDLNANE-PLVRNSPKFEIDRRDEDTRVDICCSPKPGLLLSTVNTLETLGLEIEQCVIS 310
Query: 280 VQIDLGKRANRGLMPEASVAKDLENPPSINQAM 312
D +A+ E + +D I QA+
Sbjct: 311 CFSDFSLQAS---CSEGAEQRDFITSEDIKQAL 340
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 35/97 (36%), Positives = 59/97 (60%)
Query: 10 EEDYEDDEFMSKKEAAS-NITNSNAKDGKNS--DKASVIRSK----HSVTEQRRRSKINE 62
E+ DD ++EA + + T S +++ K + S RS+ H+++E++RR +INE
Sbjct: 243 EKTNVDDRKRKEREATTTDETESRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRINE 302
Query: 63 RFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
R + L+E+IP + K D AS L E IEY++ LQ ++Q
Sbjct: 303 RMKALQELIPRCN-KSDKASMLDEAIEYMKSLQLQIQ 338
>UNIPROTKB|Q948Y2 [details] [associations]
symbol:Plw-OSB2 "R-type basic helix-loop-helix protein"
species:4530 "Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 HOGENOM:HOG000237985 EMBL:AB021080
ProteinModelPortal:Q948Y2 Gramene:Q948Y2 Genevestigator:Q948Y2
Uniprot:Q948Y2
Length = 451
Score = 130 (50.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 38/108 (35%), Positives = 59/108 (54%)
Query: 14 EDDEFMSKKEAASNITNSNAKD-GK---NSDKASVIRSKHSVTEQRRRSKINERFQILRE 69
E + + K SN D G + S I+S H ++E+RRR K+NE F IL+
Sbjct: 341 ESQKLLKKAVGGGTAWMSNIDDRGSVAITTTPGSNIKS-HVMSERRRREKLNEMFLILKS 399
Query: 70 IIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMP 117
++P S +K D AS L E I Y++ L+++V++ E S S EP++ P
Sbjct: 400 LLP-SVRKVDKASILAETITYLKVLEKRVKELESS----SREPSRWRP 442
>TAIR|locus:4010713916 [details] [associations]
symbol:AT4G28815 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
PIR:H85335 PIR:T04518 EMBL:AJ577586 IPI:IPI00530422
RefSeq:NP_001078463.1 UniGene:At.71260 ProteinModelPortal:Q7XHI7
SMR:Q7XHI7 EnsemblPlants:AT4G28815.1 GeneID:5008171
KEGG:ath:AT4G28815 TAIR:At4g28815 eggNOG:NOG83291 PhylomeDB:Q7XHI7
Genevestigator:Q7XHI7 Uniprot:Q7XHI7
Length = 307
Score = 127 (49.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 46/153 (30%), Positives = 72/153 (47%)
Query: 24 AASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASF 83
+A I + G S K S H++ E+RRR KINER + L+++IP + K S
Sbjct: 130 SAPRIQGTEEARGSTSRKRSRAAEMHNLAERRRREKINERMKTLQQLIPRCN-KSTKVSM 188
Query: 84 LLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFATQPHAIKNGSGPGS 143
L +VIEYV+ L+ ++ ++ +P +P F +Q H G GP S
Sbjct: 189 LEDVIEYVKSLEMQINQFMPHMAMGMNQPPAYIP----------FPSQAHMA--GVGP-S 235
Query: 144 MFPGKFDDNSI-SMSPTM--LTSTQ-TPVESDP 172
P ++ +I + P+ L S Q PV + P
Sbjct: 236 YPPPRYPFPNIQTFDPSRVWLQSPQPNPVSNQP 268
>TAIR|locus:2093746 [details] [associations]
symbol:FMA "AT3G24140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010052
"guard cell differentiation" evidence=IMP] [GO:0045597 "positive
regulation of cell differentiation" evidence=IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0051782 "negative regulation of cell
division" evidence=IMP] [GO:0000165 "MAPK cascade" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] [GO:0010310 "regulation of hydrogen
peroxide metabolic process" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0030154
"cell differentiation" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0003677 GO:GO:0045597 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
GO:GO:0051782 EMBL:AB028621 GO:GO:0010052 EMBL:AK221324
EMBL:BT028961 EMBL:AF488624 IPI:IPI00523995 RefSeq:NP_189056.2
UniGene:At.37586 ProteinModelPortal:Q56YJ8 SMR:Q56YJ8 IntAct:Q56YJ8
STRING:Q56YJ8 PRIDE:Q56YJ8 EnsemblPlants:AT3G24140.1 GeneID:822000
KEGG:ath:AT3G24140 TAIR:At3g24140 eggNOG:NOG326823
InParanoid:Q56YJ8 OMA:KRRRLYG PhylomeDB:Q56YJ8
ProtClustDB:CLSN2680105 Genevestigator:Q56YJ8 Uniprot:Q56YJ8
Length = 414
Score = 129 (50.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 33/95 (34%), Positives = 53/95 (55%)
Query: 9 EEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILR 68
EEED E+ ++KKE S A+ K S++ R H E+ RR ++NE ++LR
Sbjct: 162 EEEDRENKN-VTKKEVKSK--RKRARTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLR 218
Query: 69 EIIPHSD-QKRDTASFLLEVIEYVQYLQEKVQKYE 102
++P S Q+ D AS + IE+V+ L++ +Q E
Sbjct: 219 SLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLE 253
>TAIR|locus:2154197 [details] [associations]
symbol:SPCH "AT5G53210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010374 "stomatal complex development" evidence=IMP]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0042127 "regulation of cell proliferation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB013388 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 GO:GO:0010374 EMBL:DQ868373
EMBL:AJ630498 EMBL:AY568670 IPI:IPI00520239 RefSeq:NP_200133.2
UniGene:At.50528 ProteinModelPortal:Q700C7 SMR:Q700C7 STRING:Q700C7
EnsemblPlants:AT5G53210.1 GeneID:835402 KEGG:ath:AT5G53210
TAIR:At5g53210 eggNOG:NOG325833 InParanoid:Q700C7 OMA:NHESSVI
PhylomeDB:Q700C7 ProtClustDB:CLSN2719098 Genevestigator:Q700C7
Uniprot:Q700C7
Length = 364
Score = 109 (43.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 31/103 (30%), Positives = 49/103 (47%)
Query: 5 KGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERF 64
K R E E+DE +++ N +DG+ + H E+ RR ++NE
Sbjct: 69 KKQRLETRKEEDE--EEEDGDGEAEEDNKQDGQQ-------KMSHVTVERNRRKQMNEHL 119
Query: 65 QILREIIPHSDQKR-DTASFLLEVIEYVQYLQEKVQKYEVSYQ 106
+LR ++P KR D AS + V+EY+ LQ+ +Q E Q
Sbjct: 120 TVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEAKKQ 162
Score = 60 (26.2 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 28/122 (22%), Positives = 52/122 (42%)
Query: 163 STQTPVESDPNRDIACK-PMDRQPEVANKGISISMPLQGNLP--APARSDSVLLHPLQRP 219
S +TP + P R I + P+ QP + + S G+ P +PA S S +
Sbjct: 211 SPRTPQPTSPYRAIPPQLPLIPQPPLRSYSSLASCSSLGDPPPYSPASSSSS--PSVSSN 268
Query: 220 VSDAQSNECPATTDTMNQQEELTVEGGTINISSIYSQ--GLLNNLTQALESAGIDLSQAN 277
+ NE A + + E+ G + + ++ + G + + ALE +++ Q N
Sbjct: 269 HESSVINELVANSKSALADVEVKFSGANVLLKTVSHKIPGQVMKIIAALEDLALEILQVN 328
Query: 278 IS 279
I+
Sbjct: 329 IN 330
>UNIPROTKB|Q2QQ32 [details] [associations]
symbol:LOC_Os12g32400 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
eggNOG:NOG284967 Uniprot:Q2QQ32
Length = 198
Score = 121 (47.7 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 3 TTKGNREEEDYE-DDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKIN 61
TT GN+ + + ++E M+ + S +K K+S A S S + RR +IN
Sbjct: 75 TTIGNKRKVQMDTENELMTNRSKEVRTKMSVSKACKHSVSAE---SSQSYYAKNRRQRIN 131
Query: 62 ERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEP 112
ER +IL+E+IP+ K D ++ L E I+YV++L ++ K S + W P
Sbjct: 132 ERLRILQELIPNGT-KVDISTMLEEAIQYVKFLHLQI-KLLSSDEMWMYAP 180
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 131 (51.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 28/54 (51%), Positives = 39/54 (72%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H+++E++RR K+NERF LR IIP S K D S L + IEY+Q LQ++VQ+ E
Sbjct: 406 HALSEKKRREKLNERFMTLRSIIP-SISKIDKVSILDDTIEYLQDLQKRVQELE 458
>UNIPROTKB|Q53L62 [details] [associations]
symbol:LOC_Os11g15210 "Helix-loop-helix DNA-binding domain,
putative" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC145364 EnsemblPlants:LOC_Os11g15210.1
KEGG:dosa:Os11t0258700-00 Uniprot:Q53L62
Length = 458
Score = 129 (50.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 34/94 (36%), Positives = 56/94 (59%)
Query: 17 EFMSKKEAASNITNSNAKDGK----NSDKASVIRSKHSVTEQRRRSKINERFQILREIIP 72
+ + K A + +NA DG +D+ S I++ H ++E+RRR K+ E F IL+ ++P
Sbjct: 211 KLLKKAVAGAGAWMNNA-DGSAATMTTDQGSSIKN-HVMSERRRREKLKEMFLILKSVVP 268
Query: 73 HSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQ 106
S K D AS L E I Y++ L+++V++ E S Q
Sbjct: 269 -SIHKVDKASILAETIAYLKELEKRVEELESSSQ 301
>UNIPROTKB|Q84R60 [details] [associations]
symbol:OSJNBb0113I20.8 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R60 Gramene:Q84R60
Uniprot:Q84R60
Length = 353
Score = 127 (49.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 29/88 (32%), Positives = 48/88 (54%)
Query: 29 TNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVI 88
+ N G S A+ +H + E++RR KIN+RF L +IP +K D A+ L + +
Sbjct: 173 SKGNGGGGSGSSSAAPYAQEHIIAERKRREKINQRFIELSTVIPGL-KKMDKATILSDAV 231
Query: 89 EYVQYLQEKVQKYEVSYQDWSAEPTKLM 116
YV+ +QEK+ + E +Q+ E L+
Sbjct: 232 RYVKEMQEKLSELE-QHQNGGVESAILL 258
>UNIPROTKB|Q336V8 [details] [associations]
symbol:Os10g0544200 "Os10g0544200 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000086 EMBL:AP008216
EMBL:CM000147 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG245311
EMBL:AK063669 RefSeq:NP_001065200.1 UniGene:Os.46563
EnsemblPlants:LOC_Os10g39750.1 GeneID:4349271 KEGG:osa:4349271
ProtClustDB:CLSN2693493 Uniprot:Q336V8
Length = 380
Score = 103 (41.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 20/57 (35%), Positives = 36/57 (63%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV 103
SK+ + E+RRR ++N+R +LR ++P K D S L + I YV+ L ++++ +V
Sbjct: 195 SKNLMAERRRRKRLNDRLSMLRSVVPRIS-KMDRTSILGDTIGYVKELMDRIKNLQV 250
Score = 66 (28.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 21/78 (26%), Positives = 36/78 (46%)
Query: 213 LHPLQRPVSDAQSNECPATTDTMNQQEELTVEGGT-INISSIYSQGLLNNLTQALESAGI 271
L+ L+ P S + E P ++ + E G T I ++ LL + ALE+ G+
Sbjct: 270 LNTLKPPPSSSSGEETPLIRNSTRFEVERRENGSTRIEMACAAIPELLPSTLAALEALGV 329
Query: 272 DLSQANISVQIDLGKRAN 289
++ Q IS D +A+
Sbjct: 330 EIEQCVISCFDDFAMQAS 347
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 127 (49.8 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 36/106 (33%), Positives = 53/106 (50%)
Query: 15 DDEFMSKKEAASNITNSNAKDG---KNSDKASVIRSKHSVTEQRRRSKINERFQILREII 71
D E ++ EAA + G N S H ++E+RRR K+NE F IL+ ++
Sbjct: 152 DKEAVAGGEAAQRLLKKVVGGGGAWMNRAAGSCSIKNHVMSERRRREKLNEMFLILKSLV 211
Query: 72 PHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMP 117
P D K D AS L E I Y++ L+ +VQ+ E + + P K P
Sbjct: 212 PSID-KVDKASILSETIAYLKELERRVQELESGKK--VSRPAKRKP 254
>TAIR|locus:2146663 [details] [associations]
symbol:BHLH101 "AT5G04150" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010106 "cellular response to iron ion starvation"
evidence=IEP] [GO:0055072 "iron ion homeostasis" evidence=IGI]
InterPro:IPR011598 InterPro:IPR015660 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 PANTHER:PTHR13935 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0055072
HOGENOM:HOG000238662 EMBL:AJ519810 EMBL:AL391716 EMBL:DQ446915
EMBL:DQ653262 IPI:IPI00544479 RefSeq:NP_196035.1 UniGene:At.33170
ProteinModelPortal:Q9FYE6 SMR:Q9FYE6 PaxDb:Q9FYE6 PRIDE:Q9FYE6
EnsemblPlants:AT5G04150.1 GeneID:830293 KEGG:ath:AT5G04150
TAIR:At5g04150 eggNOG:NOG286867 InParanoid:Q9FYE6 OMA:QRIAANW
PhylomeDB:Q9FYE6 ProtClustDB:CLSN2914826 Genevestigator:Q9FYE6
Uniprot:Q9FYE6
Length = 240
Score = 123 (48.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 26 SNITNSNAKDGKNSDKASVIRSK---HSVTEQRRRSKINERFQILREIIPHSDQKRDTAS 82
SN TNSN + + D+ +V+ K H+ +E+ RR K+N + LR ++P SDQKR S
Sbjct: 44 SNNTNSNNNNYQEEDRGAVVLEKKLNHNASERDRRRKLNALYSSLRALLPLSDQKRKL-S 102
Query: 83 FLLEVIEYVQYLQEKVQKYE 102
+ V V+Y+ E+ Q+ +
Sbjct: 103 IPMTVARVVKYIPEQKQELQ 122
>TAIR|locus:2139484 [details] [associations]
symbol:CIB1 "AT4G34530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IDA]
[GO:0009911 "positive regulation of flower development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161585 EMBL:AL023094
HOGENOM:HOG000238007 EMBL:AF488596 EMBL:AK117846 EMBL:AY120741
EMBL:BT005313 IPI:IPI00519970 PIR:T05273 RefSeq:NP_195179.2
UniGene:At.48937 ProteinModelPortal:Q8GY61 SMR:Q8GY61
DIP:DIP-59356N IntAct:Q8GY61 PRIDE:Q8GY61 EnsemblPlants:AT4G34530.1
GeneID:829604 KEGG:ath:AT4G34530 TAIR:At4g34530 eggNOG:NOG251551
InParanoid:Q8GY61 OMA:SGYSHEM PhylomeDB:Q8GY61
ProtClustDB:CLSN2915063 Genevestigator:Q8GY61 Uniprot:Q8GY61
Length = 335
Score = 126 (49.4 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 30/96 (31%), Positives = 53/96 (55%)
Query: 5 KGNREEEDYEDDEFMSKKEAA-SNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINER 63
K +EE ++ +D KE ++ + A+ G+ +D HS+ E+ RR KI+ER
Sbjct: 145 KAKKEENNFSNDSSKVTKELEKTDYIHVRARRGQATDS-------HSIAERVRREKISER 197
Query: 64 FQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+ L++++P D+ A L E+I YVQ LQ +++
Sbjct: 198 MKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIE 233
>TAIR|locus:2123954 [details] [associations]
symbol:AT4G29930 "AT4G29930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161575 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AK117730 EMBL:BT005869 EMBL:AY568654
EMBL:AJ630482 EMBL:AK176201 EMBL:AK176276 EMBL:AK176674
EMBL:AK222212 EMBL:AK228201 EMBL:AF488569 IPI:IPI00516806
IPI:IPI00544272 IPI:IPI00546879 IPI:IPI00892082
RefSeq:NP_001031752.1 RefSeq:NP_001078471.1 RefSeq:NP_001119080.1
RefSeq:NP_194722.2 UniGene:At.44068 ProteinModelPortal:Q700E3
SMR:Q700E3 IntAct:Q700E3 EnsemblPlants:AT4G29930.3 GeneID:829116
KEGG:ath:AT4G29930 TAIR:At4g29930 eggNOG:NOG294060
HOGENOM:HOG000006429 InParanoid:Q8GYC3 OMA:PIENIGE PhylomeDB:Q700E3
ProtClustDB:CLSN2680169 Genevestigator:Q700E3 Uniprot:Q700E3
Length = 263
Score = 122 (48.0 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 34/97 (35%), Positives = 56/97 (57%)
Query: 9 EEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILR 68
+ ++ E D + +EA S S++ DG + AS SK+ V+E+ RR K+N+R LR
Sbjct: 19 QNQELEFDSW-PMEEAFSGSGESSSPDGAATSPAS---SKNVVSERNRRQKLNQRLFALR 74
Query: 69 EIIPHSDQKRDTASFLLEVIEYVQYL--QEKVQKYEV 103
++P+ K D AS + + I+Y+Q L QEK + E+
Sbjct: 75 SVVPNIS-KLDKASVIKDSIDYMQELIDQEKTLEAEI 110
>TAIR|locus:2065086 [details] [associations]
symbol:AT2G40200 "AT2G40200" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AF085279 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488586 EMBL:BT029997 EMBL:BT030051
IPI:IPI00547467 PIR:E84826 RefSeq:NP_181549.1 UniGene:At.37090
ProteinModelPortal:Q9XEF0 SMR:Q9XEF0 EnsemblPlants:AT2G40200.1
GeneID:818611 KEGG:ath:AT2G40200 TAIR:At2g40200 eggNOG:NOG318931
HOGENOM:HOG000095217 InParanoid:Q9XEF0 OMA:QPETISD PhylomeDB:Q9XEF0
ProtClustDB:CLSN2913057 ArrayExpress:Q9XEF0 Genevestigator:Q9XEF0
Uniprot:Q9XEF0
Length = 254
Score = 121 (47.7 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 40 DKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+KA + H + E+RRR +IN LR+++P+SD K D A+ L VIE V+ L++K
Sbjct: 58 EKAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSD-KLDKAALLATVIEQVKELKQKAA 116
Query: 100 KYEVSYQDWSAE 111
+ + +QD E
Sbjct: 117 ESPI-FQDLPTE 127
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 121 (47.7 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 25/56 (44%), Positives = 41/56 (73%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P+++ K D AS L E+IEYV++LQ +V+ +S
Sbjct: 110 HSIAERLRRERIAERMKSLQELVPNTN-KTDKASMLDEIIEYVRFLQLQVKVLSMS 164
>TAIR|locus:2046198 [details] [associations]
symbol:FRU "AT2G28160" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010039 "response to iron ion" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0034756 "regulation of iron ion
transport" evidence=IMP] [GO:0071281 "cellular response to iron
ion" evidence=IEP] [GO:0071369 "cellular response to ethylene
stimulus" evidence=IEP] [GO:0071732 "cellular response to nitric
oxide" evidence=IEP] [GO:0000041 "transition metal ion transport"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0071281 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC005851 GO:GO:0071732 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071369 EMBL:AF488570 EMBL:BT026446 IPI:IPI00547189
PIR:E84681 RefSeq:NP_850114.1 UniGene:At.43510
ProteinModelPortal:Q0V7X4 SMR:Q0V7X4 IntAct:Q0V7X4 STRING:Q0V7X4
PaxDb:Q0V7X4 PRIDE:Q0V7X4 EnsemblPlants:AT2G28160.1 GeneID:817362
KEGG:ath:AT2G28160 TAIR:At2g28160 eggNOG:NOG236355
HOGENOM:HOG000006047 InParanoid:Q0V7X4 OMA:NLKLWIT PhylomeDB:Q0V7X4
ProtClustDB:CLSN2690963 Genevestigator:Q0V7X4 GO:GO:0034756
Uniprot:Q0V7X4
Length = 318
Score = 121 (47.7 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 30/95 (31%), Positives = 53/95 (55%)
Query: 6 GNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQ 65
G +EEDY D + ++++ TN+ DG K RS+ ++E+RRR ++ ++
Sbjct: 99 GEEDEEDYNDGD-----DSSATTTNN---DGTRKTKTD--RSRTLISERRRRGRMKDKLY 148
Query: 66 ILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQK 100
LR ++P+ K D AS + + + YVQ LQ + +K
Sbjct: 149 ALRSLVPNIT-KMDKASIVGDAVLYVQELQSQAKK 182
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 125 (49.1 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 34/98 (34%), Positives = 51/98 (52%)
Query: 10 EEDYEDDEFMSKKEAASN--ITNSNAKDGKNSDKASVIRSK---HSVTEQRRRSKINERF 64
+ ++ D E KEA SN + K K K + R + H E++RR K+N+RF
Sbjct: 373 DSNHSDLEASVAKEAESNRVVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRF 432
Query: 65 QILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
LR ++P+ K D AS L + I Y+ L+ K+QK E
Sbjct: 433 YSLRAVVPNVS-KMDKASLLGDAISYISELKSKLQKAE 469
>TAIR|locus:2053766 [details] [associations]
symbol:AT2G42300 "AT2G42300" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005956 EMBL:AY065411 EMBL:AY096521 EMBL:AK175584
EMBL:AK176019 EMBL:AK176634 EMBL:AF488583 IPI:IPI00532521
PIR:C84852 RefSeq:NP_850368.1 UniGene:At.28495
ProteinModelPortal:Q8VZ02 SMR:Q8VZ02 EnsemblPlants:AT2G42300.1
GeneID:818831 KEGG:ath:AT2G42300 TAIR:At2g42300 eggNOG:NOG301522
HOGENOM:HOG000037005 InParanoid:Q8VZ02 OMA:PEWGREE PhylomeDB:Q8VZ02
ProtClustDB:CLSN2680198 Genevestigator:Q8VZ02 Uniprot:Q8VZ02
Length = 327
Score = 121 (47.7 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 31/100 (31%), Positives = 54/100 (54%)
Query: 9 EEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVI--RSK-------HSVTEQRRRSK 59
+ + Y + +++ + T N K SDK + R++ HS+ E+ RR K
Sbjct: 148 QNQSYSSGKRKEREKKVKSSTKKN-KSSVESDKLPYVHVRARRGQATDNHSLAERARREK 206
Query: 60 INERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
IN R ++L+E++P D+ + TA L E+I +VQ LQ +V+
Sbjct: 207 INARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQVE 246
>TAIR|locus:2117788 [details] [associations]
symbol:AT4G28800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 IPI:IPI00517558
IPI:IPI01020410 PIR:T04519 RefSeq:NP_194609.5 UniGene:At.71648
ProteinModelPortal:Q9SVU7 SMR:Q9SVU7 GeneID:829001
KEGG:ath:AT4G28800 TAIR:At4g28800 InParanoid:Q9SVU7
Genevestigator:Q9SVU7 Uniprot:Q9SVU7
Length = 445
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 29/80 (36%), Positives = 44/80 (55%)
Query: 20 SKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRD 79
SK +A + G S K S H++ E+RRR KINE+ + L+++IP + K
Sbjct: 231 SKLKAREETHGTEEARGSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCN-KST 289
Query: 80 TASFLLEVIEYVQYLQEKVQ 99
S L + IEYV+ LQ ++Q
Sbjct: 290 KVSTLDDAIEYVKSLQSQIQ 309
>TAIR|locus:2142419 [details] [associations]
symbol:AT5G10570 "AT5G10570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL353995 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488594 IPI:IPI00529696 PIR:T49982
RefSeq:NP_196619.1 UniGene:At.32362 ProteinModelPortal:Q9LXA9
SMR:Q9LXA9 EnsemblPlants:AT5G10570.1 GeneID:830922
KEGG:ath:AT5G10570 TAIR:At5g10570 eggNOG:NOG310833
HOGENOM:HOG000029066 InParanoid:Q9LXA9 OMA:SSAFDYP PhylomeDB:Q9LXA9
ProtClustDB:CLSN2914918 Genevestigator:Q9LXA9 Uniprot:Q9LXA9
Length = 315
Score = 114 (45.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 27/89 (30%), Positives = 51/89 (57%)
Query: 19 MSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKR 78
M + ++ +I +N K +++ K SK+ + E+RRR ++N+R +LR I+P K
Sbjct: 124 MEESKSFISIGETNKK--RSNKKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKIT-KM 180
Query: 79 DTASFLLEVIEYVQYLQEKVQKYEVSYQD 107
D S L + I+Y++ L +K+ K + Q+
Sbjct: 181 DRTSILGDAIDYMKELLDKINKLQEDEQE 209
Score = 44 (20.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 248 INISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRAN 289
I+I GL+ + LE+ G+++ Q IS D +A+
Sbjct: 243 IDICCPTKPGLVVSTVSTLETLGLEIEQCVISCFSDFSLQAS 284
Score = 38 (18.4 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 17/71 (23%), Positives = 30/71 (42%)
Query: 233 DTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRANRGL 292
D +N+ +E E G S+ + L+ N + S ++ Q ++ ID+ GL
Sbjct: 198 DKINKLQEDEQELG----SNSHLSTLITNESMVRNSLKFEVDQREVNTHIDICCPTKPGL 253
Query: 293 MPEASVAKDLE 303
+ S LE
Sbjct: 254 V--VSTVSTLE 262
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 119 (46.9 bits), Expect = 0.00013, P = 0.00013
Identities = 28/103 (27%), Positives = 55/103 (53%)
Query: 14 EDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPH 73
+D+E + + + K ++ ++ H + E++RR K+ +RF L +IP
Sbjct: 92 KDEEIGLPEHKKAELIIRGTKRAQSLTRSQSNAQDHILAERKRREKLTQRFVALSALIPG 151
Query: 74 SDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLM 116
+K D AS L + I++++YLQE V++YE ++ + E L+
Sbjct: 152 L-KKMDKASVLGDAIKHIKYLQESVKEYEEQKKEKTMESVVLV 193
>TAIR|locus:2074865 [details] [associations]
symbol:HEC2 "AT3G50330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] [GO:0080126 "ovary
septum development" evidence=IGI] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL132976
HOGENOM:HOG000242863 ProtClustDB:CLSN2684406 GO:GO:0048462
GO:GO:0010500 EMBL:BT010607 EMBL:AK175679 EMBL:AK175912
EMBL:AK176020 IPI:IPI00532987 PIR:T45579 RefSeq:NP_190602.1
UniGene:At.35505 ProteinModelPortal:Q9SND4 SMR:Q9SND4 IntAct:Q9SND4
EnsemblPlants:AT3G50330.1 GeneID:824195 KEGG:ath:AT3G50330
TAIR:At3g50330 eggNOG:NOG315110 InParanoid:Q9SND4 OMA:NANMAAM
PhylomeDB:Q9SND4 Genevestigator:Q9SND4 GO:GO:0080126 Uniprot:Q9SND4
Length = 231
Score = 116 (45.9 bits), Expect = 0.00014, P = 0.00014
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 27 NITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLE 86
+I + K K + + + SV + RR +I+ER +IL+ ++P K DTAS L E
Sbjct: 109 HIDPESVKPPKRKN-VRISKDPQSVAARHRRERISERIRILQRLVP-GGTKMDTASMLDE 166
Query: 87 VIEYVQYLQEKVQKYE 102
I YV++L+++VQ E
Sbjct: 167 AIHYVKFLKKQVQSLE 182
>TAIR|locus:2152551 [details] [associations]
symbol:AT5G48560 "AT5G48560" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB015468 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 eggNOG:NOG283912
ProtClustDB:CLSN2684837 EMBL:AF488610 EMBL:BT002945 EMBL:BT005637
IPI:IPI00543091 RefSeq:NP_199667.1 UniGene:At.43769
ProteinModelPortal:Q9FJL4 SMR:Q9FJL4 IntAct:Q9FJL4 PaxDb:Q9FJL4
PRIDE:Q9FJL4 EnsemblPlants:AT5G48560.1 GeneID:834912
KEGG:ath:AT5G48560 TAIR:At5g48560 InParanoid:Q9FJL4 OMA:SASCYAT
PhylomeDB:Q9FJL4 Genevestigator:Q9FJL4 Uniprot:Q9FJL4
Length = 498
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 32/97 (32%), Positives = 52/97 (53%)
Query: 5 KGNREEEDYEDDEFMSKKEAASNITNSNA-KDGKN-SDKASVIRSKHSVTEQRRRSKINE 62
K REEED E++E + ++N KD + + HS+ E+ RR KI E
Sbjct: 266 KRRREEEDDEEEEGEGEGNKSNNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGE 325
Query: 63 RFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
R ++L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 326 RMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 362
>TAIR|locus:2027809 [details] [associations]
symbol:BEE3 "AT1G73830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000090950 ProtClustDB:CLSN2680013 EMBL:AF488585
EMBL:AC012679 EMBL:AK118781 EMBL:BT006055 IPI:IPI00541876
RefSeq:NP_177524.2 UniGene:At.34949 ProteinModelPortal:Q8GWK7
SMR:Q8GWK7 EnsemblPlants:AT1G73830.1 GeneID:843719
KEGG:ath:AT1G73830 TAIR:At1g73830 eggNOG:NOG264296
InParanoid:Q8GWK7 OMA:LENNFHQ PhylomeDB:Q8GWK7
Genevestigator:Q8GWK7 Uniprot:Q8GWK7
Length = 261
Score = 117 (46.2 bits), Expect = 0.00016, P = 0.00016
Identities = 35/115 (30%), Positives = 57/115 (49%)
Query: 3 TTKGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINE 62
+TK N +KE + + A+ G+ +D HS+ E+ RR KINE
Sbjct: 121 STKNNSSRRGKRSKNREEEKER--EVVHVRARRGQATDS-------HSIAERVRRGKINE 171
Query: 63 RFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV------SYQDWSAE 111
R + L++I+P + A+ L E+I YVQ LQ +V+ + SY D+++E
Sbjct: 172 RLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFLSMKLTAASSYYDFNSE 226
>UNIPROTKB|Q8H8E4 [details] [associations]
symbol:OJ1006F06.1 "Putative bHLH transcription protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000029066 EMBL:AC099399 ProteinModelPortal:Q8H8E4
STRING:Q8H8E4 Gramene:Q8H8E4 Uniprot:Q8H8E4
Length = 430
Score = 107 (42.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 22/56 (39%), Positives = 36/56 (64%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
SK+ + E+RRR ++N+R +LR I+P K D S L + I+YV+ L E+++ E
Sbjct: 181 SKNLMAERRRRKRLNDRLSMLRSIVPKIS-KMDRTSILGDTIDYVKELTERIKTLE 235
Score = 55 (24.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 18/69 (26%), Positives = 28/69 (40%)
Query: 221 SDAQSNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISV 280
S +NE T E I I + G+L + ALE G+++ Q +S
Sbjct: 255 SSGNNNEMLVRNSTKFDVENRGSGNTRIEICCPANPGVLLSTVSALEVLGLEIEQCVVSC 314
Query: 281 QIDLGKRAN 289
D G +A+
Sbjct: 315 FSDFGMQAS 323
>TAIR|locus:2163163 [details] [associations]
symbol:PIF7 "AT5G61270" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IDA] [GO:0009704
"de-etiolation" evidence=IMP] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0009585
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB010073 HSSP:P22415
GO:GO:0009704 EMBL:AF488604 EMBL:BX831447 EMBL:AY568656
EMBL:AJ630484 EMBL:AK220640 IPI:IPI00537261 IPI:IPI00656604
RefSeq:NP_001032117.1 RefSeq:NP_200935.2 UniGene:At.29114
ProteinModelPortal:Q570R7 SMR:Q570R7 IntAct:Q570R7 STRING:Q570R7
EnsemblPlants:AT5G61270.1 GeneID:836248 KEGG:ath:AT5G61270
TAIR:At5g61270 eggNOG:NOG286182 HOGENOM:HOG000097081
InParanoid:Q9FLK6 OMA:HNESERR PhylomeDB:Q570R7
ProtClustDB:CLSN2681114 Genevestigator:Q570R7 Uniprot:Q570R7
Length = 366
Score = 119 (46.9 bits), Expect = 0.00019, P = 0.00019
Identities = 33/95 (34%), Positives = 56/95 (58%)
Query: 5 KGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERF 64
+ E +D E DE ++ EA SN + G+ A+ I H+ +E+RRR +IN+R
Sbjct: 138 RSGSETQDTEGDEQETRGEAG----RSNGRRGR----AAAI---HNESERRRRDRINQRM 186
Query: 65 QILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+ L++++P + K D S L +VIE+++ LQ +VQ
Sbjct: 187 RTLQKLLPTAS-KADKVSILDDVIEHLKQLQAQVQ 220
>TAIR|locus:2141573 [details] [associations]
symbol:FBH2 "AT4G09180" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL161514 HOGENOM:HOG000095218 ProtClustDB:CLSN2679906
EMBL:AF488613 EMBL:BT010423 EMBL:AK230384 IPI:IPI00545642
PIR:B85093 RefSeq:NP_192657.1 UniGene:At.33710
ProteinModelPortal:Q9M0R0 SMR:Q9M0R0 PaxDb:Q9M0R0 PRIDE:Q9M0R0
EnsemblPlants:AT4G09180.1 GeneID:826499 KEGG:ath:AT4G09180
TAIR:At4g09180 eggNOG:NOG277140 InParanoid:Q9M0R0 OMA:MENLMED
PhylomeDB:Q9M0R0 Genevestigator:Q9M0R0 Uniprot:Q9M0R0
Length = 262
Score = 116 (45.9 bits), Expect = 0.00021, P = 0.00021
Identities = 20/51 (39%), Positives = 39/51 (76%)
Query: 50 SVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQK 100
S+ E+ RR++I++R + L+E++P+ D++ +TA L E +EYV+ LQ ++Q+
Sbjct: 196 SIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQE 246
>TAIR|locus:2028804 [details] [associations]
symbol:CIB5 "AT1G26260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009911 "positive regulation of flower development"
evidence=IGI] [GO:0048513 "organ development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC079829 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238007
EMBL:AK117355 EMBL:BT005334 EMBL:AJ630483 EMBL:AY568655
EMBL:AF488608 IPI:IPI00529982 IPI:IPI00547855 PIR:H86388
RefSeq:NP_001031093.1 RefSeq:NP_173950.1 RefSeq:NP_973913.1
UniGene:At.41276 ProteinModelPortal:Q9C670 SMR:Q9C670 IntAct:Q9C670
STRING:Q9C670 EnsemblPlants:AT1G26260.1 EnsemblPlants:AT1G26260.2
GeneID:839167 KEGG:ath:AT1G26260 TAIR:At1g26260 eggNOG:NOG284637
InParanoid:Q9C670 OMA:ETHGYES PhylomeDB:Q9C670
ProtClustDB:CLSN2682645 Genevestigator:Q9C670 Uniprot:Q9C670
Length = 390
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 37/106 (34%), Positives = 55/106 (51%)
Query: 2 RTTKGNREEEDYEDDEFMSKKEAASNITNS------NAKDGKNSDKA--SVIRSKHSVTE 53
R K EEED + + S A N TNS + KDG +A + HS+ E
Sbjct: 180 RIGKDCEEEEDKKQKDEQSPTSNA-NKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAE 238
Query: 54 QRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+ RR KI+ER + L++++P D+ A L E+I YVQ LQ +++
Sbjct: 239 RVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIE 284
>TAIR|locus:2155543 [details] [associations]
symbol:HEC1 "HECATE 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010500 "transmitting tissue
development" evidence=IGI] [GO:0048462 "carpel formation"
evidence=IMP] [GO:0048445 "carpel morphogenesis" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:AF488618 EMBL:AK228927 IPI:IPI00530790
RefSeq:NP_201507.1 UniGene:At.28829 ProteinModelPortal:Q9FHA7
SMR:Q9FHA7 IntAct:Q9FHA7 EnsemblPlants:AT5G67060.1 GeneID:836841
KEGG:ath:AT5G67060 TAIR:At5g67060 eggNOG:NOG267961
HOGENOM:HOG000242863 InParanoid:Q9FHA7 OMA:FLFNSTH PhylomeDB:Q9FHA7
ProtClustDB:CLSN2684406 Genevestigator:Q9FHA7 GO:GO:0048462
GO:GO:0010500 Uniprot:Q9FHA7
Length = 241
Score = 115 (45.5 bits), Expect = 0.00022, P = 0.00022
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 44 VIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ + SV + RR +I+ER +IL+ ++P K DTAS L E I YV++L+++VQ E
Sbjct: 128 ISKDPQSVAARHRRERISERIRILQRLVP-GGTKMDTASMLDEAIHYVKFLKKQVQSLE 185
>TAIR|locus:2032990 [details] [associations]
symbol:CES "AT1G25330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:2000488 "positive regulation of brassinosteroid biosynthetic
process" evidence=IMP] [GO:0048441 "petal development"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG264296 EMBL:AC079374 EMBL:DQ446289 EMBL:DQ652859
EMBL:AK175757 EMBL:AY088885 EMBL:AF488607 IPI:IPI00519962
PIR:B86383 PIR:D86381 RefSeq:NP_564229.1 UniGene:At.48236
UniGene:At.63980 ProteinModelPortal:A4D998 SMR:A4D998
EnsemblPlants:AT1G25330.1 GeneID:839117 KEGG:ath:AT1G25330
GeneFarm:2907 TAIR:At1g25330 InParanoid:A4D998 PhylomeDB:A4D998
Genevestigator:A4D998 GO:GO:2000488 Uniprot:A4D998
Length = 223
Score = 114 (45.2 bits), Expect = 0.00022, P = 0.00022
Identities = 31/97 (31%), Positives = 51/97 (52%)
Query: 5 KGNREEEDYEDDEFMSKKEAASNITNSNA-KDGKN-SDKASVIRSKHSVTEQRRRSKINE 62
KGN+EE + S++E A N + KD + K HS+ E+ RR KINE
Sbjct: 69 KGNKEESGSKRRRKRSEEEEAMNGDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINE 128
Query: 63 RFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
R + L++++P + A L +I+YV+ LQ +++
Sbjct: 129 RLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIE 165
>UNIPROTKB|Q7XPS7 [details] [associations]
symbol:OSJNBa0065O17.4 "OSJNBa0065O17.4 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL606682
ProteinModelPortal:Q7XPS7 Gramene:Q7XPS7 Uniprot:Q7XPS7
Length = 567
Score = 121 (47.7 bits), Expect = 0.00023, P = 0.00023
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
H ++E+RRR K+NE F IL+ I+P S K D AS L E I Y++ L+++V++ E S
Sbjct: 393 HVISERRRREKLNEMFLILKSIVP-SIHKVDKASILEETIAYLKVLEKRVKELESS 447
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 118 (46.6 bits), Expect = 0.00023, P = 0.00023
Identities = 24/56 (42%), Positives = 40/56 (71%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P+ + K D AS L E+I+YV++LQ +V+ +S
Sbjct: 149 HSIAERLRRERIAERMKALQELVPNGN-KTDKASMLDEIIDYVKFLQLQVKVLSMS 203
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 117 (46.2 bits), Expect = 0.00023, P = 0.00023
Identities = 24/56 (42%), Positives = 40/56 (71%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P+ + K D AS L E+I+YV++LQ +V+ +S
Sbjct: 141 HSIAERLRRERIAERMKSLQELVPNGN-KTDKASMLDEIIDYVKFLQLQVKVLSMS 195
>TAIR|locus:2008693 [details] [associations]
symbol:FBH1 "AT1G35460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488612 EMBL:AC023064 EMBL:AF411791 EMBL:AY093794
IPI:IPI00538359 PIR:F86475 RefSeq:NP_174776.1 UniGene:At.18017
ProteinModelPortal:Q9C8P8 SMR:Q9C8P8 PRIDE:Q9C8P8
EnsemblPlants:AT1G35460.1 GeneID:840438 KEGG:ath:AT1G35460
TAIR:At1g35460 eggNOG:NOG263612 HOGENOM:HOG000095218
InParanoid:Q9C8P8 OMA:NLCLTEL PhylomeDB:Q9C8P8
ProtClustDB:CLSN2679906 Genevestigator:Q9C8P8 Uniprot:Q9C8P8
Length = 259
Score = 115 (45.5 bits), Expect = 0.00026, P = 0.00026
Identities = 20/51 (39%), Positives = 39/51 (76%)
Query: 50 SVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQK 100
S+ E+ RR++I++R + L+E++P+ D++ +TA L E +EYV+ LQ ++Q+
Sbjct: 193 SIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQIQE 243
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 117 (46.2 bits), Expect = 0.00028, P = 0.00028
Identities = 28/73 (38%), Positives = 44/73 (60%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
H + E+RRR KIN+RF L +IP +K D A+ L + ++YV+ LQEKV+ E +D
Sbjct: 168 HIIAERRRREKINQRFIELSTVIPGL-KKMDKATILGDAVKYVKELQEKVKTLEE--EDG 224
Query: 109 SAEPTKLMPWRNS 121
P ++ ++S
Sbjct: 225 GGRPAAMVVRKSS 237
>UNIPROTKB|Q69WS3 [details] [associations]
symbol:OJ1118_E12.15 "Putative bHLH protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003743
ProteinModelPortal:Q69WS3 Gramene:Q69WS3 Uniprot:Q69WS3
Length = 268
Score = 112 (44.5 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER +IL++++P ++ AS L E+I Y+Q LQ +V+
Sbjct: 139 HSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVE 189
Score = 40 (19.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 8 REEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSK 48
R + EDD+ +SK + S + G++SD R K
Sbjct: 46 RSDAGPEDDD-LSKVVSTSAASGGGGGGGQDSDAPEAKRLK 85
>TAIR|locus:2201906 [details] [associations]
symbol:AT1G10120 "AT1G10120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC004122 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT012655 EMBL:AK221806 EMBL:AK229309
EMBL:AK230347 EMBL:AF488606 IPI:IPI00541831 PIR:T00632
RefSeq:NP_172483.4 UniGene:At.43391 UniGene:At.69296
ProteinModelPortal:Q6NKN9 SMR:Q6NKN9 EnsemblPlants:AT1G10120.1
GeneID:837549 KEGG:ath:AT1G10120 TAIR:At1g10120 eggNOG:NOG271189
HOGENOM:HOG000090626 InParanoid:Q6NKN9 OMA:GESSHED PhylomeDB:Q6NKN9
ProtClustDB:CLSN2681496 Genevestigator:Q6NKN9 Uniprot:Q6NKN9
Length = 366
Score = 117 (46.2 bits), Expect = 0.00032, P = 0.00032
Identities = 28/95 (29%), Positives = 53/95 (55%)
Query: 5 KGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERF 64
K ++ +E + S++ N + A+ G+ ++ HS+ E+ RR KI+ER
Sbjct: 180 KNDQSKETVNKESSQSEEAPKENYIHMRARRGQATNS-------HSLAERVRREKISERM 232
Query: 65 QILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
++L+E++P ++ A L E+I YVQ LQ++V+
Sbjct: 233 RLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 267
>UNIPROTKB|Q84LH4 [details] [associations]
symbol:OSJNBb0011H13.2 "Putative Helix-loop-helix
DNA-binding domain containing protein" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 EMBL:AP008209
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140 EMBL:AC120983
EMBL:AC135956 RefSeq:NP_001051150.1 UniGene:Os.24540
EnsemblPlants:LOC_Os03g51910.1 GeneID:4333984 KEGG:osa:4333984
eggNOG:NOG262475 OMA:SKQMMLS ProtClustDB:CLSN2694257 Uniprot:Q84LH4
Length = 327
Score = 116 (45.9 bits), Expect = 0.00033, P = 0.00033
Identities = 40/161 (24%), Positives = 67/161 (41%)
Query: 9 EEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILR 68
EE++ + M KE +S+ + K + HS+ E+ RR KI+ER ++L+
Sbjct: 118 EEDNQKSCSKMQSKEDSSDGDGTKEDYVHVRAKRGQATNSHSLAERLRRKKISERMKLLQ 177
Query: 69 EIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNF 128
+++P + A L E+I YVQ LQ +V+ + + P +
Sbjct: 178 DLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLA--TVNPELSFDIEQILSKQMML 235
Query: 129 ATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVE 169
+ H G PGS + I M P ML + P +
Sbjct: 236 SQDRHLAFYGVDPGSSALVAHFNQGI-MQPEMLCNVSNPAD 275
>UNIPROTKB|Q75M33 [details] [associations]
symbol:P0668H12.5 "BHLH transcription factor" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000142 EMBL:AC084818 EMBL:AC073405 EMBL:HQ858853
EMBL:AK065864 RefSeq:NP_001054390.1 UniGene:Os.23082
EnsemblPlants:LOC_Os05g01256.1 EnsemblPlants:LOC_Os05g01256.2
GeneID:4337537 KEGG:osa:4337537 eggNOG:NOG296531 Uniprot:Q75M33
Length = 339
Score = 116 (45.9 bits), Expect = 0.00036, P = 0.00036
Identities = 38/127 (29%), Positives = 61/127 (48%)
Query: 13 YEDDEFMSKKEAA-----SNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQIL 67
++DD KEAA + + A+ G+ +D HS+ E+ RR KI+ER ++L
Sbjct: 157 HDDDVKKKAKEAAGGEPPAGYIHVRARRGQATDS-------HSLAERVRREKISERMKML 209
Query: 68 REIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRV-Q 126
+ ++P D+ A L E+I YVQ LQ +V+ + S + P + H V +
Sbjct: 210 QSLVPGCDKVTGKALMLDEIISYVQSLQNQVEFLSMKLASLSPLMYEFGPGIDMHPDVLR 269
Query: 127 NFATQPH 133
A PH
Sbjct: 270 QLAKMPH 276
>UNIPROTKB|G3V2R5 [details] [associations]
symbol:MAX "Protein max" species:9606 "Homo sapiens"
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL139022 HGNC:HGNC:6913
ChiTaRS:MAX ProteinModelPortal:G3V2R5 SMR:G3V2R5
Ensembl:ENST00000556443 ArrayExpress:G3V2R5 Bgee:G3V2R5
Uniprot:G3V2R5
Length = 125
Score = 95 (38.5 bits), Expect = 0.00039, P = 0.00039
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPH-SDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
R+ H+ E++RR I + F LR+ +P +K A L + EY+QY++ K ++
Sbjct: 16 RAHHNALERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNHTHQQD 75
Query: 105 YQDWSAEPTKLMPWRNSH 122
D + L+ + H
Sbjct: 76 IDDLKRQ-NALLEQQGEH 92
>UNIPROTKB|Q6Z7E7 [details] [associations]
symbol:P0020C11.18 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:CM000139
EMBL:AP004865 EMBL:AK241924 EnsemblPlants:LOC_Os02g35660.1
OMA:TTAMQYL Uniprot:Q6Z7E7
Length = 524
Score = 118 (46.6 bits), Expect = 0.00044, P = 0.00044
Identities = 24/56 (42%), Positives = 42/56 (75%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR KI++R + L+E++P+S+ K + AS L E+I+YV++LQ +V+ +S
Sbjct: 325 HSIAERLRREKISDRMKDLQELVPNSN-KTNKASMLDEIIDYVKFLQLQVKVLSMS 379
>UNIPROTKB|Q67TR8 [details] [associations]
symbol:B1342C04.6 "Basic helix-loop-helix (BHLH)-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP005655 EMBL:AP006057
EMBL:AK060477 EMBL:AK070458 RefSeq:NP_001063357.1 UniGene:Os.51063
EnsemblPlants:LOC_Os09g28210.1 GeneID:4347252 KEGG:osa:4347252
OMA:AYPAFHA ProtClustDB:CLSN2697769 Uniprot:Q67TR8
Length = 236
Score = 112 (44.5 bits), Expect = 0.00046, P = 0.00046
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 44 VIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ + SV + RR +I+ER +IL+ ++P K DTAS L E I YV++L+ +VQ E
Sbjct: 147 ISKDPQSVAARLRRERISERIRILQRLVP-GGTKMDTASMLDEAIHYVKFLKSQVQSLE 204
>TAIR|locus:2130619 [details] [associations]
symbol:AT4G16430 "AT4G16430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:Z97341 EMBL:AL161544
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251688 EMBL:AF428368
EMBL:AY057626 EMBL:BT002301 IPI:IPI00546344 PIR:A71431
RefSeq:NP_193376.1 UniGene:At.33082 UniGene:At.4413
ProteinModelPortal:O23487 SMR:O23487 STRING:O23487 PaxDb:O23487
PRIDE:O23487 EnsemblPlants:AT4G16430.1 GeneID:827337
KEGG:ath:AT4G16430 TAIR:At4g16430 eggNOG:NOG246663
InParanoid:O23487 OMA:RSMSINF PhylomeDB:O23487
ProtClustDB:CLSN2685658 Genevestigator:O23487 Uniprot:O23487
Length = 467
Score = 117 (46.2 bits), Expect = 0.00047, P = 0.00047
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQ 106
H E++RR K+N+RF LR ++P+ K D AS L + I Y+ +Q+K++ YE Q
Sbjct: 321 HVEAERQRREKLNQRFYALRAVVPNIS-KMDKASLLADAITYITDMQKKIRVYETEKQ 377
>TAIR|locus:2045263 [details] [associations]
symbol:AT2G31730 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009723 "response to
ethylene stimulus" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 EMBL:CP002685 GO:GO:0003700
GO:GO:0009739 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240890 OMA:SKGLCLV EMBL:AJ576041 IPI:IPI00539360
RefSeq:NP_180732.3 UniGene:At.38180 ProteinModelPortal:Q7XJU1
SMR:Q7XJU1 DNASU:817730 EnsemblPlants:AT2G31730.1 GeneID:817730
KEGG:ath:AT2G31730 TAIR:At2g31730 InParanoid:Q7XJU1
PhylomeDB:Q7XJU1 ProtClustDB:CLSN2687695 Genevestigator:Q7XJU1
Uniprot:Q7XJU1
Length = 153
Score = 104 (41.7 bits), Expect = 0.00049, P = 0.00049
Identities = 30/95 (31%), Positives = 49/95 (51%)
Query: 12 DYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREII 71
+Y D E N+ + +D K S S S + + R+ K+ ER L++++
Sbjct: 2 EYSRDSAEMMMETKRNVYS--LEDNKIKRHKS---SDLSFSSKERKDKLAERISALQQLV 56
Query: 72 -PHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
P+ K DTAS LLE ++Y+Q+LQE+V+ Y
Sbjct: 57 SPYG--KTDTASVLLEGMQYIQFLQEQVKVLSAPY 89
>UNIPROTKB|G3V563 [details] [associations]
symbol:MAX "Protein max" species:9606 "Homo sapiens"
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL139022 HGNC:HGNC:6913
ChiTaRS:MAX ProteinModelPortal:G3V563 SMR:G3V563
Ensembl:ENST00000557746 ArrayExpress:G3V563 Bgee:G3V563
Uniprot:G3V563
Length = 121
Score = 94 (38.1 bits), Expect = 0.00050, P = 0.00050
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPH-SDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
R+ H+ E++RR I + F LR+ +P +K A L + EY+QY++ K ++
Sbjct: 16 RAHHNALERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNHTHQQD 75
Query: 105 YQD 107
D
Sbjct: 76 IDD 78
>UNIPROTKB|Q6V3B1 [details] [associations]
symbol:MAX "MAX protein" species:9606 "Homo sapiens"
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P61244 EMBL:AL139022
HOVERGEN:HBG008542 UniGene:Hs.285354 HGNC:HGNC:6913 ChiTaRS:MAX
EMBL:AY353088 EMBL:CR542191 IPI:IPI01024945 SMR:Q6V3B1
STRING:Q6V3B1 Ensembl:ENST00000555667 UCSC:uc001xii.1
Uniprot:Q6V3B1
Length = 94
Score = 94 (38.1 bits), Expect = 0.00050, P = 0.00050
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPH-SDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
R+ H+ E++RR I + F LR+ +P +K A L + EY+QY++ K ++
Sbjct: 16 RAHHNALERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNHTHQQD 75
Query: 105 YQD 107
D
Sbjct: 76 IDD 78
>TAIR|locus:2118934 [details] [associations]
symbol:RSL2 "AT4G33880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0048766 "root hair initiation"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0003677 GO:GO:0016049 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL031032
EMBL:AL161584 HOGENOM:HOG000240244 GO:GO:0048766 EMBL:AF488616
EMBL:BT003137 EMBL:AK228110 IPI:IPI00526320 PIR:T05216
RefSeq:NP_195114.2 UniGene:At.31542 ProteinModelPortal:Q84WK0
SMR:Q84WK0 EnsemblPlants:AT4G33880.1 GeneID:829531
KEGG:ath:AT4G33880 TAIR:At4g33880 eggNOG:NOG318365
InParanoid:Q84WK0 OMA:TINTNSY PhylomeDB:Q84WK0
ProtClustDB:CLSN2680247 Genevestigator:Q84WK0 Uniprot:Q84WK0
Length = 352
Score = 115 (45.5 bits), Expect = 0.00050, P = 0.00050
Identities = 31/109 (28%), Positives = 56/109 (51%)
Query: 5 KGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERF 64
+ N ++D ++ SK++ S N N GK S+ ++RR +INER
Sbjct: 236 ESNCADQDGGGEDSSSKEDDPSKALNLN---GKTRASRGAATDPQSLYARKRRERINERL 292
Query: 65 QILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQD-WSAEP 112
+IL+ ++P+ K D ++ L E + YV++LQ +++ +S D W P
Sbjct: 293 RILQNLVPNGT-KVDISTMLEEAVHYVKFLQLQIKL--LSSDDLWMYAP 338
>UNIPROTKB|F1PX28 [details] [associations]
symbol:SOHLH2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459 CTD:54937
OMA:CCEQLRT GeneTree:ENSGT00390000016050 EMBL:AAEX03014208
RefSeq:XP_543134.3 Ensembl:ENSCAFT00000010028 GeneID:486009
KEGG:cfa:486009 Uniprot:F1PX28
Length = 426
Score = 116 (45.9 bits), Expect = 0.00053, P = 0.00053
Identities = 31/96 (32%), Positives = 49/96 (51%)
Query: 5 KGNREEEDYEDDEFMSKKEAASNITNSNAKDG-KNSDKASVIRSKHSVTEQRRRSKINER 63
K E+ Y + + EA N K NS+K+ I HS E+ RR +I
Sbjct: 161 KSCSEQLGYFSTDLFACSEALRNDIGLELKAPVPNSEKSKKISLLHSSKEKLRRERIKYC 220
Query: 64 FQILREIIPH-SDQKRDTASFLLEVIEYVQYLQEKV 98
+ LR ++P+ +K DTAS L ++YV+Y++EK+
Sbjct: 221 CEQLRTLLPYIKGRKNDTASILEATVDYVKYIREKI 256
>UNIPROTKB|Q84T08 [details] [associations]
symbol:OSJNBa0087C10.10 "BHLH transcription factor,
putative, expressed" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC108906 RefSeq:NP_001051605.1
UniGene:Os.33544 STRING:Q84T08 EnsemblPlants:LOC_Os03g58830.1
GeneID:4334471 KEGG:osa:4334471 OMA:GTSTSEW ProtClustDB:CLSN2694415
Uniprot:Q84T08
Length = 265
Score = 112 (44.5 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER +IL++++P ++ AS L E+I Y+Q LQ +V+
Sbjct: 147 HSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVE 197
Score = 37 (18.1 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 11/45 (24%), Positives = 20/45 (44%)
Query: 3 TTKGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRS 47
T+ G +D D E K + S+ NS+ + +D + +S
Sbjct: 74 TSGGGGGGQDLTDSEAKRFKASKSSGDNSSLRTEAETDSRNASKS 118
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 118 (46.6 bits), Expect = 0.00056, P = 0.00055
Identities = 32/93 (34%), Positives = 45/93 (48%)
Query: 10 EEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILRE 69
E D+ D E KE A + K G+ H E++RR K+N+RF LR
Sbjct: 416 ESDHSDLEASVVKEVA--VEKRPKKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRA 473
Query: 70 IIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
++P+ K D AS L + I Y+ L+ KV K E
Sbjct: 474 VVPNVS-KMDKASLLGDAIAYINELKSKVVKTE 505
>TAIR|locus:2126856 [details] [associations]
symbol:IND "AT4G00120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010197 "polar nucleus fusion" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161471
GO:GO:0010197 EMBL:AF069299 EMBL:BT029443 EMBL:AF488578
IPI:IPI00532644 PIR:T01340 RefSeq:NP_191923.1 UniGene:At.34598
ProteinModelPortal:O81313 SMR:O81313 IntAct:O81313 STRING:O81313
PRIDE:O81313 EnsemblPlants:AT4G00120.1 GeneID:827911
KEGG:ath:AT4G00120 TAIR:At4g00120 eggNOG:NOG274244
HOGENOM:HOG000113070 InParanoid:O81313 OMA:DWNKAND PhylomeDB:O81313
ProtClustDB:CLSN2916160 Genevestigator:O81313 Uniprot:O81313
Length = 198
Score = 109 (43.4 bits), Expect = 0.00058, P = 0.00058
Identities = 36/122 (29%), Positives = 59/122 (48%)
Query: 9 EEEDYEDDEFMSKKEAASNITNSNAKD-------GKNSDKASVIRSKHSVTEQRRRSKIN 61
E+E+Y++D + KE I D N + +V +RRR +I+
Sbjct: 77 EDEEYDED-MDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERIS 135
Query: 62 ERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWS--AEPTKLMPWR 119
E+ +IL+ I+P K DTAS L E I Y ++L+ +V+ + Q + A P+ L +
Sbjct: 136 EKIRILKRIVP-GGAKMDTASMLDEAIRYTKFLKRQVRILQPHSQIGAPMANPSYLCYYH 194
Query: 120 NS 121
NS
Sbjct: 195 NS 196
>TAIR|locus:505006688 [details] [associations]
symbol:AT5G50915 "AT5G50915" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009739 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB017063 EMBL:AF428350 EMBL:AY057549 EMBL:AY113059
EMBL:AY087602 IPI:IPI00536793 RefSeq:NP_568745.1 RefSeq:NP_851163.1
UniGene:At.23601 ProteinModelPortal:Q93W88 SMR:Q93W88
EnsemblPlants:AT5G50915.1 EnsemblPlants:AT5G50915.2 GeneID:835164
KEGG:ath:AT5G50915 TAIR:At5g50915 eggNOG:NOG262059
HOGENOM:HOG000242938 InParanoid:Q93W88 OMA:ISERMRT PhylomeDB:Q93W88
ProtClustDB:CLSN2689980 Genevestigator:Q93W88 Uniprot:Q93W88
Length = 286
Score = 112 (44.5 bits), Expect = 0.00073, P = 0.00073
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 20 SKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRD 79
SK+E ++ + A+ G+ +D HS+ E+ RR KI+ER + L+ ++P D+
Sbjct: 125 SKEEPPTDYIHVRARRGQATDS-------HSLAERVRREKISERMRTLQNLVPGCDKVTG 177
Query: 80 TASFLLEVIEYVQYLQEKVQ 99
A L E+I YVQ LQ +V+
Sbjct: 178 KALMLDEIINYVQTLQTQVE 197
>TAIR|locus:2115200 [details] [associations]
symbol:BEE2 "AT4G36540" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
PROSITE:PS00678 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161589 EMBL:Z99708
EMBL:AF488591 EMBL:AF370231 EMBL:AY059122 EMBL:AY054588
EMBL:BT000388 EMBL:AY084997 EMBL:AY138254 IPI:IPI00540245
IPI:IPI00548266 PIR:D85431 RefSeq:NP_195372.1 RefSeq:NP_849508.1
UniGene:At.25403 ProteinModelPortal:Q93VJ4 SMR:Q93VJ4 IntAct:Q93VJ4
PRIDE:Q93VJ4 EnsemblPlants:AT4G36540.1 GeneID:829806
KEGG:ath:AT4G36540 TAIR:At4g36540 eggNOG:NOG240651
InParanoid:Q93VJ4 OMA:ELECHID PhylomeDB:Q93VJ4
ProtClustDB:CLSN2685556 Genevestigator:Q93VJ4 Uniprot:Q93VJ4
Length = 304
Score = 112 (44.5 bits), Expect = 0.00082, P = 0.00082
Identities = 31/105 (29%), Positives = 58/105 (55%)
Query: 2 RTTKGNREEEDYEDDEFMSKKEAASNITNSN-AKDGKNSDKASV------IRSKHSVTEQ 54
+T K +++ ED+ S K SN++N+ + + + D V +HS+ E+
Sbjct: 99 KTEKREKKKIKAEDETEPSMK-GKSNMSNTETSSEIQKPDYIHVRARRGEATDRHSLAER 157
Query: 55 RRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
RR KI+++ + L++I+P ++ A L E+I YVQ LQ++V+
Sbjct: 158 ARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVE 202
>UNIPROTKB|Q6Z9R3 [details] [associations]
symbol:P0461F06.33 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000145
eggNOG:NOG315110 EMBL:AP004693 EnsemblPlants:LOC_Os08g36740.1
OMA:SAMREMI Uniprot:Q6Z9R3
Length = 246
Score = 110 (43.8 bits), Expect = 0.00086, P = 0.00086
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 50 SVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
SV + RR +I+ER +IL+ ++P K DTAS L E I YV++L+ +VQ E
Sbjct: 163 SVAARMRRERISERIRILQRLVP-GGTKMDTASMLDEAIHYVKFLKTQVQSLE 214
>TAIR|locus:2014144 [details] [associations]
symbol:BEE1 "BR enhanced expression 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC013354
EMBL:AY138253 EMBL:AF488579 EMBL:AK117269 EMBL:BT005268
IPI:IPI00539846 RefSeq:NP_173276.2 UniGene:At.46141
ProteinModelPortal:Q8GZ13 SMR:Q8GZ13 IntAct:Q8GZ13
EnsemblPlants:AT1G18400.1 GeneID:838421 KEGG:ath:AT1G18400
TAIR:At1g18400 eggNOG:euNOG17991 HOGENOM:HOG000090950
InParanoid:Q8GZ13 PhylomeDB:Q8GZ13 ProtClustDB:CLSN2680013
Genevestigator:Q8GZ13 Uniprot:Q8GZ13
Length = 260
Score = 110 (43.8 bits), Expect = 0.00098, P = 0.00098
Identities = 30/95 (31%), Positives = 54/95 (56%)
Query: 5 KGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERF 64
+G R ++ E+++ +KE + + A+ G+ +D HS+ E+ RR KINER
Sbjct: 124 RGKRLKKKKEEED---EKER--EVVHVRARRGQATDS-------HSLAERVRRGKINERL 171
Query: 65 QILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+ L++++P + A+ L E+I YVQ LQ +V+
Sbjct: 172 RCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVE 206
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.309 0.125 0.348 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 333 333 0.00091 116 3 11 23 0.50 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 80
No. of states in DFA: 608 (65 KB)
Total size of DFA: 214 KB (2119 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 36.84u 0.13s 36.97t Elapsed: 00:00:01
Total cpu time: 36.85u 0.13s 36.98t Elapsed: 00:00:01
Start: Fri May 10 17:38:14 2013 End: Fri May 10 17:38:15 2013