BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019960
(333 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255547053|ref|XP_002514584.1| conserved hypothetical protein [Ricinus communis]
gi|223546188|gb|EEF47690.1| conserved hypothetical protein [Ricinus communis]
Length = 348
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/310 (70%), Positives = 251/310 (80%), Gaps = 14/310 (4%)
Query: 34 KDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQY 93
KDGKNSDKA+ IRSKHSVTEQRRRSKINERFQILR++IPHSDQKRDTASFLLEVIEYVQY
Sbjct: 41 KDGKNSDKANAIRSKHSVTEQRRRSKINERFQILRDLIPHSDQKRDTASFLLEVIEYVQY 100
Query: 94 LQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNS 153
LQEKVQKYE SYQ WS+EPTKLMPWRNSHWRVQ+F P IKNGSGPGS PGKFD+N+
Sbjct: 101 LQEKVQKYEGSYQGWSSEPTKLMPWRNSHWRVQSFIGHPQPIKNGSGPGSTIPGKFDENT 160
Query: 154 ISMSPTMLTSTQTPVESDPNRDIACKPMDRQPEVANKGI--------SISMPLQ--GNLP 203
I+++PTMLT Q VESDP+RD+ CK MDR PEVANK + +I +P+ G +
Sbjct: 161 IAINPTMLTGAQNQVESDPSRDVTCKAMDRHPEVANKVLLHPVSLQTTIPIPVHSDGAIA 220
Query: 204 APARSDSVLLHPLQRPVSDAQSNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNNLT 263
P SD + HPLQ+PV+DAQS + P T+ +NQQEELT+EGGTI+ISS+YSQGLLNNLT
Sbjct: 221 HPVHSDGAIAHPLQQPVTDAQSADFPITSGALNQQEELTIEGGTISISSVYSQGLLNNLT 280
Query: 264 QALESAGIDLSQANISVQIDLGKRANRGLMPEASVAKDLENPP-SINQAMAKLRDVSSGE 322
++L+SAG+DLS ANISVQIDLGKRANRGL S KD PP S NQ A LRDVSSGE
Sbjct: 281 RSLQSAGVDLSDANISVQIDLGKRANRGLASGTSTTKD---PPLSNNQVAAHLRDVSSGE 337
Query: 323 DSDHSQKRLR 332
DSD +QKRL+
Sbjct: 338 DSDQAQKRLK 347
>gi|302398603|gb|ADL36596.1| BHLH domain class transcription factor [Malus x domestica]
Length = 334
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/336 (68%), Positives = 272/336 (80%), Gaps = 7/336 (2%)
Query: 1 MRTT-KGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSK 59
MRT KGN+EE++Y+++EF S+KE S +NSN+KD KN+DKAS IRSKHSVTEQRRRSK
Sbjct: 1 MRTAAKGNQEEDEYDEEEFGSRKEGPS--SNSNSKDAKNNDKASAIRSKHSVTEQRRRSK 58
Query: 60 INERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWR 119
INERFQILR++IPHSDQKRDTASFLLEVIEYVQYLQEKV KYE SYQ WS EPTKLMPWR
Sbjct: 59 INERFQILRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVHKYEGSYQGWSPEPTKLMPWR 118
Query: 120 NSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLT-STQTPVESDPNRDIAC 178
NSHWRVQ+F P AIK+ + P FPGKFD+++IS++P ML ST PVESDP+RD+A
Sbjct: 119 NSHWRVQSFVGNPQAIKSDAAPMLPFPGKFDESNISINPNMLANSTPNPVESDPSRDVAS 178
Query: 179 KPMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPAT--TDTMN 236
K +DRQPE+ NKGI + MPL N+ P RSD VL HPLQ +SDAQS +CP T +D ++
Sbjct: 179 KIVDRQPEIVNKGIPLPMPLP-NIAPPVRSDGVLAHPLQGQISDAQSTQCPTTSASDVLS 237
Query: 237 QQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRANRGLMPEA 296
QQEELT+EGGTI+ISS+YSQGLLN+L+QAL+SAG+DLSQA+ISVQIDLG RANRGL
Sbjct: 238 QQEELTIEGGTISISSVYSQGLLNSLSQALQSAGVDLSQASISVQIDLGNRANRGLPSVT 297
Query: 297 SVAKDLENPPSINQAMAKLRDVSSGEDSDHSQKRLR 332
+KD +NP S NQ A RD SGEDSD + KRL+
Sbjct: 298 PASKDNDNPHSSNQTTAHFRDAGSGEDSDQAHKRLK 333
>gi|359806380|ref|NP_001241235.1| uncharacterized protein LOC100816055 [Glycine max]
gi|255635096|gb|ACU17906.1| unknown [Glycine max]
Length = 336
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/333 (66%), Positives = 267/333 (80%), Gaps = 1/333 (0%)
Query: 1 MRTTKGNREEEDYEDDEF-MSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSK 59
MR KG++EE++YE++EF SKK+ S+ N+N DGK DKAS IRSKHSVTEQRRRSK
Sbjct: 1 MRAGKGSQEEDEYEEEEFGSSKKQGTSSAPNTNKADGKAIDKASAIRSKHSVTEQRRRSK 60
Query: 60 INERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWR 119
INERFQILR++IPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE SYQ W EP+KLMPWR
Sbjct: 61 INERFQILRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEGSYQGWGQEPSKLMPWR 120
Query: 120 NSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACK 179
NSHWRVQ+FA QP A+KNG GP S FPGKFD++++S+SPTML +Q ++ D +RDI K
Sbjct: 121 NSHWRVQSFAGQPTAVKNGLGPVSPFPGKFDESNVSISPTMLNGSQNTIDPDQSRDIVNK 180
Query: 180 PMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPATTDTMNQQE 239
+RQP++ +KGI + + + N+ P RSD VL HPLQ VS+AQS ECP T++ NQQ+
Sbjct: 181 TAERQPDLVSKGIPLPLAMHANMSVPVRSDGVLAHPLQGTVSNAQSTECPTTSEPQNQQD 240
Query: 240 ELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRANRGLMPEASVA 299
EL+VEGGTI+ISS YSQGLLNNLTQAL+SAG+DLSQA+ISVQI+LGKRAN+GL S
Sbjct: 241 ELSVEGGTISISSAYSQGLLNNLTQALQSAGLDLSQASISVQINLGKRANKGLNCGTSSL 300
Query: 300 KDLENPPSINQAMAKLRDVSSGEDSDHSQKRLR 332
K +NP S NQ +A RD SGEDSD +QKR++
Sbjct: 301 KHHDNPSSNNQTIAHFRDAGSGEDSDQAQKRMK 333
>gi|357488103|ref|XP_003614339.1| Transcription factor BIM2 [Medicago truncatula]
gi|355515674|gb|AES97297.1| Transcription factor BIM2 [Medicago truncatula]
Length = 335
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/333 (66%), Positives = 266/333 (79%), Gaps = 2/333 (0%)
Query: 1 MRTTKGNREEEDYEDDEFMS-KKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSK 59
M+ K N EE++Y+DDEF S KK+A S++ N+N KDGK +DKASVIRSKHSVTEQRRRSK
Sbjct: 1 MKAGKVNHEEDEYDDDEFNSNKKQATSSVPNTN-KDGKATDKASVIRSKHSVTEQRRRSK 59
Query: 60 INERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWR 119
INERFQILR++IP DQKRDTASFLLEVIEYVQYLQE+VQKYE SYQ WS EP+KLMPWR
Sbjct: 60 INERFQILRDLIPQCDQKRDTASFLLEVIEYVQYLQERVQKYEGSYQGWSQEPSKLMPWR 119
Query: 120 NSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACK 179
NSHWR QNF QP +KNGSGP FPGKFD+NS+ +SPTML+ + ++ DP RDI K
Sbjct: 120 NSHWRAQNFVGQPPIVKNGSGPVLPFPGKFDENSVGISPTMLSGSHNMIDHDPTRDIVGK 179
Query: 180 PMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPATTDTMNQQE 239
+RQP++A+KGI + M + N+ P RSD VL HPLQ VSDAQS ECP T++ +NQQ+
Sbjct: 180 TAERQPDLASKGIPLPMAMHANMSVPVRSDGVLSHPLQGTVSDAQSTECPTTSEQLNQQD 239
Query: 240 ELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRANRGLMPEASVA 299
+LTVEGGTI+ISS+YSQGLLNNLTQAL+SAG+DLS+ANISVQIDLGKRAN+ AS
Sbjct: 240 DLTVEGGTISISSVYSQGLLNNLTQALQSAGLDLSKANISVQIDLGKRANKDPSGTASSP 299
Query: 300 KDLENPPSINQAMAKLRDVSSGEDSDHSQKRLR 332
K+ +NP NQ+ A RD + EDSD +QKR++
Sbjct: 300 KNHDNPLCCNQSFAHFRDGGNREDSDQAQKRMK 332
>gi|359473634|ref|XP_002266685.2| PREDICTED: transcription factor BIM2-like [Vitis vinifera]
gi|297738196|emb|CBI27397.3| unnamed protein product [Vitis vinifera]
Length = 328
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/332 (66%), Positives = 262/332 (78%), Gaps = 5/332 (1%)
Query: 1 MRTTKGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKI 60
M+ KG+REEE+ E++E +S K+ KDGKN DKA+ +RSKHSVTEQRRRSKI
Sbjct: 1 MKQDKGHREEEEEEEEEELSMKKEGP----LTKKDGKNHDKANAMRSKHSVTEQRRRSKI 56
Query: 61 NERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRN 120
NERFQILR++IPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE SYQ + EPTKLMPWRN
Sbjct: 57 NERFQILRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEGSYQGLTPEPTKLMPWRN 116
Query: 121 SHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACKP 180
SHWRVQ+F P AI NGSGPGS F GKFD+N+I+++ TML Q PVESD +RD CK
Sbjct: 117 SHWRVQSFVGHPQAINNGSGPGSAFSGKFDENNINITSTMLVKAQNPVESDLSRDATCKA 176
Query: 181 MDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPATTDTMNQQEE 240
MD Q E NK I + + LQ N+ AP +S+ L+HPLQ PVSDAQS +CP T++T++++EE
Sbjct: 177 MDHQSEF-NKAIVMPISLQSNMSAPVQSEGGLVHPLQGPVSDAQSADCPITSETLSKKEE 235
Query: 241 LTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRANRGLMPEASVAK 300
L +EGGTI+ISS YSQGLLN LTQAL+S+G+DLSQA+ISVQIDLGKRANRGL S+AK
Sbjct: 236 LMIEGGTISISSAYSQGLLNTLTQALQSSGVDLSQASISVQIDLGKRANRGLPSGTSIAK 295
Query: 301 DLENPPSINQAMAKLRDVSSGEDSDHSQKRLR 332
D ENPP N +A RD SS EDSD SQKRL+
Sbjct: 296 DHENPPPSNHIIAHHRDASSAEDSDQSQKRLK 327
>gi|217074640|gb|ACJ85680.1| unknown [Medicago truncatula]
gi|388490634|gb|AFK33383.1| unknown [Medicago truncatula]
Length = 335
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/333 (65%), Positives = 265/333 (79%), Gaps = 2/333 (0%)
Query: 1 MRTTKGNREEEDYEDDEFMS-KKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSK 59
M+ K N EE++Y+DDEF S KK+A S++ N++ KDGK +DKASVIRSKHSVTEQRRRSK
Sbjct: 1 MKAGKVNHEEDEYDDDEFNSNKKQATSSVPNTD-KDGKATDKASVIRSKHSVTEQRRRSK 59
Query: 60 INERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWR 119
INERFQILR++IP DQKRDTASFLLEVIEYVQYLQE+VQKYE SYQ WS EP+KLMPWR
Sbjct: 60 INERFQILRDLIPQCDQKRDTASFLLEVIEYVQYLQERVQKYEGSYQGWSQEPSKLMPWR 119
Query: 120 NSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACK 179
NSHWR QNF QP +KNGSGP FPGKFD+NS+ +SPTML+ + ++ DP RDI K
Sbjct: 120 NSHWRAQNFVGQPPIVKNGSGPVLPFPGKFDENSVGISPTMLSGSHNMMDHDPTRDIVGK 179
Query: 180 PMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPATTDTMNQQE 239
+RQP++A+KGI + M + N+ P RSD VL H LQ VSDAQS ECP T++ +NQQ+
Sbjct: 180 TAERQPDLASKGIPLPMAMHANMSVPVRSDGVLSHSLQGTVSDAQSTECPTTSEQLNQQD 239
Query: 240 ELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRANRGLMPEASVA 299
+LTVEGGTI+ISS+YSQGLLNNLTQAL+SAG+DLS+ANISVQIDLGKRAN+ AS
Sbjct: 240 DLTVEGGTISISSVYSQGLLNNLTQALQSAGLDLSKANISVQIDLGKRANKDPSGTASSP 299
Query: 300 KDLENPPSINQAMAKLRDVSSGEDSDHSQKRLR 332
K+ +NP NQ+ A RD + EDSD +QKR++
Sbjct: 300 KNHDNPLCCNQSFAHFRDGGNREDSDQAQKRMK 332
>gi|358249202|ref|NP_001239754.1| uncharacterized protein LOC100795416 [Glycine max]
gi|255635070|gb|ACU17893.1| unknown [Glycine max]
Length = 335
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/333 (65%), Positives = 260/333 (78%), Gaps = 2/333 (0%)
Query: 1 MRTTKGNREEEDYEDDEF-MSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSK 59
MR KG++EE++YE++EF SKK+ S+ N+N KDGK DKAS IRSKHSVTEQRRRSK
Sbjct: 1 MRAGKGSQEEDEYEEEEFGSSKKQGTSSAPNAN-KDGKAIDKASAIRSKHSVTEQRRRSK 59
Query: 60 INERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWR 119
INERFQILR++IPHSDQKRDTASFLLEV+EYVQYLQEKVQKYE SYQ W EP KLMPWR
Sbjct: 60 INERFQILRDLIPHSDQKRDTASFLLEVMEYVQYLQEKVQKYEGSYQGWGQEPLKLMPWR 119
Query: 120 NSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACK 179
NSHWRVQ+FA QP A+KNG GP S FP KFD+++ S+SPTML+ TQ ++ +RDI K
Sbjct: 120 NSHWRVQSFAGQPTAVKNGLGPVSPFPVKFDESNASISPTMLSGTQNTIDPYQSRDIVNK 179
Query: 180 PMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPATTDTMNQQE 239
+RQP++ NKG+ + + + N+ P RSD VL HPL VSD QS ECP T++ NQQ+
Sbjct: 180 TAERQPDLVNKGMPLPLAMHANMSVPVRSDGVLAHPLHGTVSDPQSTECPTTSEPQNQQD 239
Query: 240 ELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRANRGLMPEASVA 299
E TVEGGTI+ISS YSQGLLNNLTQAL+SAG+DLSQA+ISVQI+LGKR N+GL S
Sbjct: 240 EFTVEGGTISISSAYSQGLLNNLTQALQSAGLDLSQASISVQINLGKRGNKGLSCGTSSP 299
Query: 300 KDLENPPSINQAMAKLRDVSSGEDSDHSQKRLR 332
K +NP S NQ +A RD SGEDSD QKR++
Sbjct: 300 KHHDNPSSNNQTIAHFRDAGSGEDSDQVQKRMK 332
>gi|357488105|ref|XP_003614340.1| Transcription factor BIM2 [Medicago truncatula]
gi|355515675|gb|AES97298.1| Transcription factor BIM2 [Medicago truncatula]
Length = 326
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/333 (63%), Positives = 257/333 (77%), Gaps = 11/333 (3%)
Query: 1 MRTTKGNREEEDYEDDEFMS-KKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSK 59
M+ K N EE++Y+DDEF S KK+A S++ N+N KDGK +DKASVIRSKHSVTEQRRRSK
Sbjct: 1 MKAGKVNHEEDEYDDDEFNSNKKQATSSVPNTN-KDGKATDKASVIRSKHSVTEQRRRSK 59
Query: 60 INERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWR 119
INERFQILR++IP DQKRDTASFLLE E+VQKYE SYQ WS EP+KLMPWR
Sbjct: 60 INERFQILRDLIPQCDQKRDTASFLLE---------ERVQKYEGSYQGWSQEPSKLMPWR 110
Query: 120 NSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACK 179
NSHWR QNF QP +KNGSGP FPGKFD+NS+ +SPTML+ + ++ DP RDI K
Sbjct: 111 NSHWRAQNFVGQPPIVKNGSGPVLPFPGKFDENSVGISPTMLSGSHNMIDHDPTRDIVGK 170
Query: 180 PMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPATTDTMNQQE 239
+RQP++A+KGI + M + N+ P RSD VL HPLQ VSDAQS ECP T++ +NQQ+
Sbjct: 171 TAERQPDLASKGIPLPMAMHANMSVPVRSDGVLSHPLQGTVSDAQSTECPTTSEQLNQQD 230
Query: 240 ELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRANRGLMPEASVA 299
+LTVEGGTI+ISS+YSQGLLNNLTQAL+SAG+DLS+ANISVQIDLGKRAN+ AS
Sbjct: 231 DLTVEGGTISISSVYSQGLLNNLTQALQSAGLDLSKANISVQIDLGKRANKDPSGTASSP 290
Query: 300 KDLENPPSINQAMAKLRDVSSGEDSDHSQKRLR 332
K+ +NP NQ+ A RD + EDSD +QKR++
Sbjct: 291 KNHDNPLCCNQSFAHFRDGGNREDSDQAQKRMK 323
>gi|224108629|ref|XP_002314914.1| predicted protein [Populus trichocarpa]
gi|222863954|gb|EEF01085.1| predicted protein [Populus trichocarpa]
Length = 322
Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/319 (63%), Positives = 245/319 (76%), Gaps = 20/319 (6%)
Query: 18 FMSKKEAASN---ITNSN-AKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPH 73
F S+K+ S+ I N+N KDGK+SDKA+ IRSKHSVTEQ+RRSKINERFQILR++IPH
Sbjct: 19 FGSRKDGPSSNFTIDNTNSCKDGKHSDKANAIRSKHSVTEQKRRSKINERFQILRDLIPH 78
Query: 74 SDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFATQPH 133
SDQKRDTASFLLEVIEYVQYLQEKVQKYE Y WS EP KLMPWRNSHWR+Q+F P
Sbjct: 79 SDQKRDTASFLLEVIEYVQYLQEKVQKYEGPYPGWSPEPAKLMPWRNSHWRLQSFVGHPQ 138
Query: 134 AIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACKPMDRQPEVANKGIS 193
A KNGSG G+ FPGK D+N+I+++P ML ST +ESD + CK ++ QPE+AN
Sbjct: 139 ATKNGSGLGAAFPGKLDENNITLTPAMLPSTPNLIESD---HVTCKVLEHQPELAN---- 191
Query: 194 ISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPATTDTMNQQEELTVEGGTINISSI 253
++P +PAPARSD ++ PL++PVSDAQS ECP T++ +NQQ EL +E GTI+ISS+
Sbjct: 192 -ALP----MPAPARSDGLVAPPLEQPVSDAQSAECPITSEMLNQQ-ELAIEAGTISISSV 245
Query: 254 YSQGLLNNLTQALESAGIDLSQANISVQIDLGKRANRGLMPEASVAKDLENPPSINQAMA 313
YSQ LLN LTQAL+SA +DLSQANISVQIDLGKRAN+GL S +KD P NQ M
Sbjct: 246 YSQELLNTLTQALQSASVDLSQANISVQIDLGKRANKGLASGTSTSKD---PQDCNQVMT 302
Query: 314 KLRDVSSGEDSDHSQKRLR 332
LRD S GEDSD +QKRL+
Sbjct: 303 HLRDASEGEDSDQAQKRLK 321
>gi|449452819|ref|XP_004144156.1| PREDICTED: transcription factor BIM2-like [Cucumis sativus]
gi|449530757|ref|XP_004172359.1| PREDICTED: transcription factor BIM2-like [Cucumis sativus]
Length = 325
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/332 (59%), Positives = 255/332 (76%), Gaps = 8/332 (2%)
Query: 1 MRTTKGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKI 60
MRT K N+E+++Y++DE + K+E S + SNA + KN+DKA+ IRSKHSVTEQRRRSKI
Sbjct: 1 MRTGKSNQEDDEYDEDELVGKREGPS--STSNAINAKNNDKANAIRSKHSVTEQRRRSKI 58
Query: 61 NERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRN 120
NERFQILR++IPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE SYQ+WS EPTKL+PWRN
Sbjct: 59 NERFQILRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEGSYQNWSGEPTKLIPWRN 118
Query: 121 SHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACKP 180
SHWR+Q F ++KNGS G + GKFDDN+IS+SP ML S+Q P++S RDI
Sbjct: 119 SHWRMQTFVGHQQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDIL--- 175
Query: 181 MDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPATTDTMNQQEE 240
++ ++ NK + M L+GN+ A RSD+VL H L P+SD Q+ ECP T + NQ EE
Sbjct: 176 --QEADITNK-VPHPMSLEGNMHASIRSDTVLDHSLHIPISDPQATECPITNNASNQPEE 232
Query: 241 LTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRANRGLMPEASVAK 300
+ +EGGTI++SS+YS+G +N+L QAL+S G+DLSQA+ISVQIDLGKRAN+G+ + K
Sbjct: 233 MGIEGGTISVSSVYSEGFMNSLAQALQSTGLDLSQASISVQIDLGKRANKGMPFGTPIFK 292
Query: 301 DLENPPSINQAMAKLRDVSSGEDSDHSQKRLR 332
+ NP S + AMA + D+ SG+DS+ ++KRLR
Sbjct: 293 ETGNPSSNHPAMANVGDLGSGDDSEQAKKRLR 324
>gi|224101635|ref|XP_002312362.1| predicted protein [Populus trichocarpa]
gi|222852182|gb|EEE89729.1| predicted protein [Populus trichocarpa]
Length = 296
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/279 (67%), Positives = 221/279 (79%), Gaps = 14/279 (5%)
Query: 18 FMSKKEAASN---ITNSNA-KDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPH 73
F S+K+ S+ + N+N+ KDGKNSD+A+ IRSKHSVTEQRRRSKINERFQILR++IPH
Sbjct: 19 FGSRKDGPSSSFTVNNNNSSKDGKNSDRANAIRSKHSVTEQRRRSKINERFQILRDLIPH 78
Query: 74 SDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFATQPH 133
SDQKRDTASFLLEVIEYVQ+LQEKVQKYE YQ WS EP KLMPWRNSHWR+Q+ P
Sbjct: 79 SDQKRDTASFLLEVIEYVQHLQEKVQKYEGPYQGWSPEPAKLMPWRNSHWRLQSSVGHPQ 138
Query: 134 AIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACKPMDRQPEVANKGIS 193
AIKNG PG FPGK D+N+I+++P ML ST VESD +ACK ++ QPE+ NK
Sbjct: 139 AIKNGYVPGETFPGKLDENNIALTPAMLPSTPNLVESD---HVACKVLEHQPELGNK--- 192
Query: 194 ISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPATTDTMNQQEELTVEGGTINISSI 253
+MPL PAP RS ++ HP Q PVSDAQS ECP T++ +NQQ EL +E GTINISS+
Sbjct: 193 -AMPLP--TPAPIRSVGLVAHPCQLPVSDAQSAECPITSEMLNQQ-ELAIEAGTINISSV 248
Query: 254 YSQGLLNNLTQALESAGIDLSQANISVQIDLGKRANRGL 292
YSQ LLN LTQ+L+SAG+DLSQANISVQIDLGKRANRGL
Sbjct: 249 YSQELLNTLTQSLQSAGVDLSQANISVQIDLGKRANRGL 287
>gi|312281819|dbj|BAJ33775.1| unnamed protein product [Thellungiella halophila]
Length = 317
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 192/335 (57%), Positives = 246/335 (73%), Gaps = 23/335 (6%)
Query: 1 MRTTKGNREEEDYEDDEFMSKKEA-ASNITNSNA-KDGKNSDKASVIRSKHSVTEQRRRS 58
MRT KGN EEEDY +++F SK+E +SN +N+ A +D K +DKAS IRSKHSVTEQRRRS
Sbjct: 1 MRTGKGNLEEEDYGEEDFGSKREGPSSNNSNTAASRDSKENDKASAIRSKHSVTEQRRRS 60
Query: 59 KINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPW 118
KINERFQILRE+IP+S+QKRDTASFLLEVI+YVQYLQEKVQKYE SY WS EPTKL PW
Sbjct: 61 KINERFQILRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQKYEGSYPGWSQEPTKLTPW 120
Query: 119 RNSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIAC 178
RN+HWRVQ+ A P A+ NGSGP FPGKFD+N++ +P ++ Q PVESD R + C
Sbjct: 121 RNNHWRVQSLANHPVAVSNGSGPVIPFPGKFDENTVVSTPAIIAEMQNPVESDKGRAMVC 180
Query: 179 KPMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPATTDTMNQQ 238
KP+D QPE+ +KG+ P+Q P P L+H + +NECPAT D + Q
Sbjct: 181 KPIDIQPELDDKGLP---PVQ---PIPP-----LVH------GEQANNECPATNDGLGQS 223
Query: 239 EELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRANRGLMPEASV 298
++ +EGGTI+IS++YS LL++LTQAL++AGIDLS A +SVQIDLGKRAN+GL +
Sbjct: 224 NDMVIEGGTISISTVYSHELLSSLTQALQNAGIDLSHAKLSVQIDLGKRANQGLTRDNPS 283
Query: 299 AKDLENPPSIN-QAMAKLRDVSSGEDSDHSQKRLR 332
K NP S + + ++RD + E+S+HSQKR++
Sbjct: 284 NK---NPSSSDIEGATQIRDPNVEEESEHSQKRMK 315
>gi|297838673|ref|XP_002887218.1| hypothetical protein ARALYDRAFT_476029 [Arabidopsis lyrata subsp.
lyrata]
gi|297333059|gb|EFH63477.1| hypothetical protein ARALYDRAFT_476029 [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 362 bits (930), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 192/332 (57%), Positives = 238/332 (71%), Gaps = 25/332 (7%)
Query: 1 MRTTKGNREEEDYEDDEFMSKKEA-ASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSK 59
MRT KGN+EEEDY +++F SK+E +SN T + D K +DKAS IRSKHSVTEQRRRSK
Sbjct: 1 MRTGKGNQEEEDYGEEDFSSKREGPSSNTTVHSNTDSKENDKASAIRSKHSVTEQRRRSK 60
Query: 60 INERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWR 119
INERFQILRE+IP+S+QKRDTASFLLEVI+YVQYLQEKVQKYE SY WS EPTKL PWR
Sbjct: 61 INERFQILRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQKYEGSYPGWSQEPTKLTPWR 120
Query: 120 NSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACK 179
N+HWRVQ+ A P AI NGSGPG FPGKF++N+++ +P ++ Q P+ESD R I
Sbjct: 121 NNHWRVQSLANHPVAINNGSGPGIPFPGKFEENTVTSTPAIVAEPQIPIESDKGRAITGI 180
Query: 180 PMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPATTDTMNQQE 239
++ QPE+ +KG+ PLQ LP V Q+NECPAT+D + Q
Sbjct: 181 SIESQPELDDKGLP---PLQPILPM---------------VQGEQANECPATSDGLRQSN 222
Query: 240 ELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRANRGLMPEASVA 299
+L +EGGTI+ISS YS LLN+LTQAL++AGIDLS A +SVQIDLGKRAN+GL + +
Sbjct: 223 DLVIEGGTISISSAYSHELLNSLTQALQNAGIDLSHAKLSVQIDLGKRANQGLTHDEPSS 282
Query: 300 KDLENPPSINQAMAKLRDVSSGEDSDHSQKRL 331
K NP S + + RD S E+S+HS KR+
Sbjct: 283 K---NPLSSD---TQARDPSIEEESEHSHKRM 308
>gi|15221582|ref|NP_177064.1| transcription factor BIM2 [Arabidopsis thaliana]
gi|61211674|sp|Q9CAA4.1|BIM2_ARATH RecName: Full=Transcription factor BIM2; AltName:
Full=BES1-interacting Myc-like protein 2; AltName:
Full=Basic helix-loop-helix protein 102;
Short=AtbHLH102; Short=bHLH 102; AltName:
Full=Transcription factor EN 125; AltName: Full=bHLH
transcription factor bHLH102
gi|12323222|gb|AAG51594.1|AC011665_15 putative DNA-binding protein [Arabidopsis thaliana]
gi|26983866|gb|AAN86185.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|332196754|gb|AEE34875.1| transcription factor BIM2 [Arabidopsis thaliana]
Length = 311
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 181/302 (59%), Positives = 223/302 (73%), Gaps = 19/302 (6%)
Query: 1 MRTTKGNREEEDYEDDEFMSKKEA-ASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSK 59
MRT KGN+EEEDY +++F SK+E +SN T + +D K +DKAS IRSKHSVTEQRRRSK
Sbjct: 1 MRTGKGNQEEEDYGEEDFNSKREGPSSNTTVHSNRDSKENDKASAIRSKHSVTEQRRRSK 60
Query: 60 INERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWR 119
INERFQILRE+IP+S+QKRDTASFLLEVI+YVQYLQEKVQKYE SY WS EPTKL PWR
Sbjct: 61 INERFQILRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQKYEGSYPGWSQEPTKLTPWR 120
Query: 120 NSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACK 179
N+HWRVQ+ P AI NGSGPG FPGKF+DN+++ +P ++ Q P+ESD R I
Sbjct: 121 NNHWRVQSLGNHPVAINNGSGPGIPFPGKFEDNTVTSTPAIIAEPQIPIESDKARAITGI 180
Query: 180 PMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPATTDTMNQQE 239
++ QPE+ +KG+ PLQ LP V Q+NECPAT+D + Q
Sbjct: 181 SIESQPELDDKGLP---PLQPILPM---------------VQGEQANECPATSDGLGQSN 222
Query: 240 ELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRANRGLMPEASVA 299
+L +EGGTI+ISS YS LL++LTQAL++AGIDLSQA +SVQIDLGKRAN+GL E +
Sbjct: 223 DLVIEGGTISISSAYSHELLSSLTQALQNAGIDLSQAKLSVQIDLGKRANQGLTHEEPSS 282
Query: 300 KD 301
K+
Sbjct: 283 KN 284
>gi|21555388|gb|AAM63847.1| putative DNA-binding protein [Arabidopsis thaliana]
Length = 311
Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 179/302 (59%), Positives = 221/302 (73%), Gaps = 19/302 (6%)
Query: 1 MRTTKGNREEEDYEDDEFMSKKEA-ASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSK 59
MRT K N+EEEDY +++F SK+E +SN T + +D K +DKAS IRSKHSVTEQRRRSK
Sbjct: 1 MRTGKRNQEEEDYGEEDFNSKREGPSSNTTVHSNRDSKENDKASAIRSKHSVTEQRRRSK 60
Query: 60 INERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWR 119
INERFQILRE+IP+S+QKRDTASFLLEVI+YVQYLQEKVQKYE SY WS EPTKL PWR
Sbjct: 61 INERFQILRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQKYEGSYPGWSQEPTKLTPWR 120
Query: 120 NSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACK 179
N+HWRVQ+ P AI NGSGPG FPGKF+DN+++ +P ++ Q P+ESD R I
Sbjct: 121 NNHWRVQSLGNHPVAINNGSGPGIPFPGKFEDNTVTSTPAIIAEPQIPIESDKARAITGI 180
Query: 180 PMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPATTDTMNQQE 239
++ QPE+ +K + PLQ LP V Q+NECPAT+D + Q
Sbjct: 181 SIESQPELDDKRLP---PLQPILPM---------------VQGEQANECPATSDGLGQSN 222
Query: 240 ELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRANRGLMPEASVA 299
+L +EGGTI+ISS YS LL++LTQAL++AGIDLSQA +SVQIDLGKRAN+GL E +
Sbjct: 223 DLVIEGGTISISSAYSHELLSSLTQALQNAGIDLSQAKLSVQIDLGKRANQGLTHEEPSS 282
Query: 300 KD 301
K+
Sbjct: 283 KN 284
>gi|147799074|emb|CAN61628.1| hypothetical protein VITISV_002993 [Vitis vinifera]
Length = 386
Score = 337 bits (864), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 179/328 (54%), Positives = 212/328 (64%), Gaps = 59/328 (17%)
Query: 63 RFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSH 122
RFQILR++IPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE SYQ + EPTKLMPWRNSH
Sbjct: 59 RFQILRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEGSYQGLTPEPTKLMPWRNSH 118
Query: 123 WRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACKPMD 182
WRVQ+F P AI NGSGPGS F GKFD+N+I+++ TML Q PVESD +RD CK MD
Sbjct: 119 WRVQSFVGHPQAINNGSGPGSAFSGKFDENNINITSTMLVKAQNPVESDLSRDATCKAMD 178
Query: 183 RQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPATTDTMNQQEELT 242
Q E NK I + + LQ N+ AP +S+ L+HPLQ PVSDAQS +CP T++T++++EEL
Sbjct: 179 HQSEF-NKAIVMPISLQSNMSAPVQSEGGLVHPLQGPVSDAQSADCPITSETLSKKEELM 237
Query: 243 VEGGTINISSIYSQ-------------------GLLNNLTQALESAG------------- 270
+EGGTI+ISS YSQ G+L + Q + AG
Sbjct: 238 IEGGTISISSAYSQGYKEFYVSHTIPLVALAELGMLCSXFQGILIAGRDLSAGPLSGNAA 297
Query: 271 --------------------------IDLSQANISVQIDLGKRANRGLMPEASVAKDLEN 304
+DLSQA+ISVQIDLGKRANRGL S+AKD EN
Sbjct: 298 AQPRLYNIXVYIXLLNTLTQALQSSGVDLSQASISVQIDLGKRANRGLPSGTSIAKDHEN 357
Query: 305 PPSINQAMAKLRDVSSGEDSDHSQKRLR 332
PP N +A RD SS EDSD SQKRL+
Sbjct: 358 PPPSNHIIAHHRDASSAEDSDQSQKRLK 385
>gi|195970382|gb|ACG60671.1| hypothetical protein BoB028L01.040 [Brassica oleracea var.
alboglabra]
Length = 307
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 181/335 (54%), Positives = 223/335 (66%), Gaps = 33/335 (9%)
Query: 1 MRTTKGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKI 60
MRT K N+EE+DY +++F SK+E S SN D K +DKAS IRSKHSVTEQRRRSKI
Sbjct: 1 MRTGKANQEEDDYGEEDFGSKREGPS----SNHTDVKENDKASAIRSKHSVTEQRRRSKI 56
Query: 61 NERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRN 120
NERFQILREIIP+S+QKRDTASFLLEVI+YVQYLQEKVQKYE SY WS EPTKL PWRN
Sbjct: 57 NERFQILREIIPNSEQKRDTASFLLEVIDYVQYLQEKVQKYEGSYPGWSQEPTKLTPWRN 116
Query: 121 SHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACKP 180
+HWRVQ+ A NGS P FPGKF++NS++ S + Q PVESD R KP
Sbjct: 117 NHWRVQSLA-------NGSVPLIPFPGKFEENSVAFSGPAVAEMQNPVESDQGRTAVYKP 169
Query: 181 MDRQPEV-ANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPATTDTMNQ-Q 238
+D QPE NK + P+ HPL + +NECPAT+D Q
Sbjct: 170 IDSQPEFDDNKELPPVQPIH--------------HPLVH--GEQANNECPATSDGAGQSN 213
Query: 239 EELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRANRGLMPEASV 298
+L VEGGTI+IS+ YS LL++LTQAL++AG+DLS A +SVQIDLG+RAN+GL
Sbjct: 214 NDLVVEGGTISISTAYSHELLSSLTQALQNAGVDLSHAKLSVQIDLGRRANQGLTHNDPS 273
Query: 299 AKDLENP-PSINQAMAKLRDVSSGEDSDHSQKRLR 332
K NP S + + R+ S +S+H+ KR++
Sbjct: 274 NK---NPFSSHTEGATRSRNPSVEGESEHAHKRMK 305
>gi|359491383|ref|XP_002273274.2| PREDICTED: transcription factor BIM1-like [Vitis vinifera]
Length = 565
Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 179/347 (51%), Positives = 230/347 (66%), Gaps = 21/347 (6%)
Query: 3 TTKGNREEEDYEDDEFMSKKEAASNITNSNAK-DGKNSDKASVI-RSKHSVTEQRRRSKI 60
+ KG +EEE+ +++EF+ KKE++SN + K DGK+SD+ +V RSKHS TEQRRRSKI
Sbjct: 215 SAKGTQEEEEEDEEEFVLKKESSSNKGDLTVKVDGKSSDQKAVTPRSKHSATEQRRRSKI 274
Query: 61 NERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRN 120
N+RFQ+LR++IPHSDQKRD ASFLLEVIEY+Q+LQEKV KYE S+Q W+ E KLMPWRN
Sbjct: 275 NDRFQMLRDLIPHSDQKRDKASFLLEVIEYIQFLQEKVHKYEGSFQGWNHESAKLMPWRN 334
Query: 121 SHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACKP 180
SH ++FA Q I +GSGP MF KFD+N++++SP + +TQ PVESD + K
Sbjct: 335 SHRPAESFADQSRGINSGSGPALMFSAKFDENNVAVSPNISRNTQNPVESDLSASTTFKA 394
Query: 181 MDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQ---------------- 224
MDR P + NK + I M LQ N+ P L R DA+
Sbjct: 395 MDRHPGLTNKAVPIHMQLQPNIFTPVVGGGGLAQLPPRLAPDAENMASLPQSQLWQSRSS 454
Query: 225 -SNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQID 283
+ EC +D + +Q ELT+EGGTI+ISS YSQGLLN LTQAL+S+G+DLS+A+ISVQID
Sbjct: 455 VTTECTVASDKLKEQ-ELTIEGGTISISSAYSQGLLNTLTQALQSSGVDLSKASISVQID 513
Query: 284 LGKRANRGLMPEASVAKDLENPPSINQAMAKLRDVSSGEDSDHSQKR 330
LG +AN + KD PS N A A+ R SSG DSD + KR
Sbjct: 514 LGNKANSRPTAPTPIIKD-NQVPSSNHATARSRVASSGGDSDQALKR 559
>gi|297734112|emb|CBI15359.3| unnamed protein product [Vitis vinifera]
Length = 565
Score = 310 bits (795), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 179/349 (51%), Positives = 230/349 (65%), Gaps = 23/349 (6%)
Query: 3 TTKGNREEEDYEDDEFMSKKEAASNITNSNAK-DGKNSDKASVI-RSKHSVTEQRRRSKI 60
+ KG +EEE+ +++EF+ KKE++SN + K DGK+SD+ +V RSKHS TEQRRRSKI
Sbjct: 213 SAKGTQEEEEEDEEEFVLKKESSSNKGDLTVKVDGKSSDQKAVTPRSKHSATEQRRRSKI 272
Query: 61 NER--FQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPW 118
N+R FQ+LR++IPHSDQKRD ASFLLEVIEY+Q+LQEKV KYE S+Q W+ E KLMPW
Sbjct: 273 NDRRVFQMLRDLIPHSDQKRDKASFLLEVIEYIQFLQEKVHKYEGSFQGWNHESAKLMPW 332
Query: 119 RNSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIAC 178
RNSH ++FA Q I +GSGP MF KFD+N++++SP + +TQ PVESD +
Sbjct: 333 RNSHRPAESFADQSRGINSGSGPALMFSAKFDENNVAVSPNISRNTQNPVESDLSASTTF 392
Query: 179 KPMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQ-------------- 224
K MDR P + NK + I M LQ N+ P L R DA+
Sbjct: 393 KAMDRHPGLTNKAVPIHMQLQPNIFTPVVGGGGLAQLPPRLAPDAENMASLPQSQLWQSR 452
Query: 225 ---SNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQ 281
+ EC +D + +Q ELT+EGGTI+ISS YSQGLLN LTQAL+S+G+DLS+A+ISVQ
Sbjct: 453 SSVTTECTVASDKLKEQ-ELTIEGGTISISSAYSQGLLNTLTQALQSSGVDLSKASISVQ 511
Query: 282 IDLGKRANRGLMPEASVAKDLENPPSINQAMAKLRDVSSGEDSDHSQKR 330
IDLG +AN + KD PS N A A+ R SSG DSD + KR
Sbjct: 512 IDLGNKANSRPTAPTPIIKD-NQVPSSNHATARSRVASSGGDSDQALKR 559
>gi|386307235|gb|AFJ05597.1| bHLH1 protein [Salvia miltiorrhiza]
Length = 332
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 189/337 (56%), Positives = 233/337 (69%), Gaps = 15/337 (4%)
Query: 1 MRTTKGNREEEDYEDDEF-MSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSK 59
MR KG++EE++YE++EF SKK+ S+ N+N DGK DKAS IRSKHSVTEQRRRSK
Sbjct: 1 MRAGKGSQEEDEYEEEEFGSSKKQGTSSAPNTNKADGKAIDKASAIRSKHSVTEQRRRSK 60
Query: 60 INERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE--VSYQDWSAEPTKLMP 117
INERFQILR++IPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE +S ++ A M
Sbjct: 61 INERFQILRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEGVISTLEFRAHKADAM- 119
Query: 118 WRNSHWRVQNFATQPHAIKNGS--GPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRD 175
+ S R + F KNG GPGS FPG+FD+NSI + T+ P+E D D
Sbjct: 120 EKQSLARSE-FCWSATDDKNGHGPGPGSSFPGRFDENSIGVPMTLQPGQPNPIEPDHVMD 178
Query: 176 IACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQR-PVSDAQSNECPATTDT 234
+P+D E+ NK S+SMPL +P +D H L P S+AQS++CP+T D
Sbjct: 179 AQGRPIDLHTELPNK--SMSMPLP--IPVSMGNDGPFSHTLHGPPPSEAQSSDCPSTADA 234
Query: 235 MNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRANRGLMP 294
+N Q+ELT+EGGTI++SSIYS+GLL LTQAL+S G+DLSQA+ISVQI+LGKRANRG
Sbjct: 235 LNLQDELTIEGGTISVSSIYSEGLLAALTQALQSTGVDLSQASISVQINLGKRANRGAT- 293
Query: 295 EASVAKDLENP-PSINQAMAKLRDVSSGEDSDHSQKR 330
AS AKD P PS NQ + D +S ED D +QKR
Sbjct: 294 -ASTAKDHIIPTPSSNQPVGTFHDATSSEDLDVAQKR 329
>gi|359488373|ref|XP_002278322.2| PREDICTED: transcription factor BIM2-like [Vitis vinifera]
Length = 345
Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 163/315 (51%), Positives = 205/315 (65%), Gaps = 27/315 (8%)
Query: 35 DGKNSD-KASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQY 93
DG++ D K S RSKHS TEQRRRSKINERFQILR++IP +DQKRD ASFLLEVIEY+Q+
Sbjct: 37 DGRSVDQKVSAHRSKHSATEQRRRSKINERFQILRDLIPQNDQKRDKASFLLEVIEYIQF 96
Query: 94 LQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNS 153
LQEK+ YE SYQ WS EPTKLMPWRN V+NF IKNGSG +N+
Sbjct: 97 LQEKLNMYEGSYQGWSQEPTKLMPWRN-RGPVENFMDHSQVIKNGSG---------HENN 146
Query: 154 ISMSPTMLTSTQTPVESDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVLL 213
++++P L + Q PVESD A MD P A++ + ++MPLQ N+ +
Sbjct: 147 VAVTPATLVNAQNPVESDFGTAAAYNVMDNTPGPASQAVPLNMPLQTNMFTHVGRSDIPT 206
Query: 214 HPLQRPVSDAQ----------------SNECPATTDTMNQQEELTVEGGTINISSIYSQG 257
L VSD + + +C ++T+N+ EELT+E GT++ISS YSQG
Sbjct: 207 QSLHGSVSDVENIASQPLPHFSHGRPCTTDCAVPSNTVNEPEELTIESGTVSISSAYSQG 266
Query: 258 LLNNLTQALESAGIDLSQANISVQIDLGKRANRGLMPEASVAKDLENPPSINQAMAKLRD 317
LLN+LTQAL+S+G+DLSQA+ISVQID+GKRAN+GL S AKD ENP N+ MA
Sbjct: 267 LLNSLTQALQSSGVDLSQASISVQIDIGKRANKGLNATTSNAKDYENPSPSNRTMAHSGF 326
Query: 318 VSSGEDSDHSQKRLR 332
SS EDSD + KRLR
Sbjct: 327 RSSSEDSDQAHKRLR 341
>gi|298204444|emb|CBI16924.3| unnamed protein product [Vitis vinifera]
Length = 402
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 163/315 (51%), Positives = 205/315 (65%), Gaps = 27/315 (8%)
Query: 35 DGKNSD-KASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQY 93
DG++ D K S RSKHS TEQRRRSKINERFQILR++IP +DQKRD ASFLLEVIEY+Q+
Sbjct: 94 DGRSVDQKVSAHRSKHSATEQRRRSKINERFQILRDLIPQNDQKRDKASFLLEVIEYIQF 153
Query: 94 LQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNS 153
LQEK+ YE SYQ WS EPTKLMPWRN V+NF IKNGSG +N+
Sbjct: 154 LQEKLNMYEGSYQGWSQEPTKLMPWRN-RGPVENFMDHSQVIKNGSG---------HENN 203
Query: 154 ISMSPTMLTSTQTPVESDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVLL 213
++++P L + Q PVESD A MD P A++ + ++MPLQ N+ +
Sbjct: 204 VAVTPATLVNAQNPVESDFGTAAAYNVMDNTPGPASQAVPLNMPLQTNMFTHVGRSDIPT 263
Query: 214 HPLQRPVSDAQ----------------SNECPATTDTMNQQEELTVEGGTINISSIYSQG 257
L VSD + + +C ++T+N+ EELT+E GT++ISS YSQG
Sbjct: 264 QSLHGSVSDVENIASQPLPHFSHGRPCTTDCAVPSNTVNEPEELTIESGTVSISSAYSQG 323
Query: 258 LLNNLTQALESAGIDLSQANISVQIDLGKRANRGLMPEASVAKDLENPPSINQAMAKLRD 317
LLN+LTQAL+S+G+DLSQA+ISVQID+GKRAN+GL S AKD ENP N+ MA
Sbjct: 324 LLNSLTQALQSSGVDLSQASISVQIDIGKRANKGLNATTSNAKDYENPSPSNRTMAHSGF 383
Query: 318 VSSGEDSDHSQKRLR 332
SS EDSD + KRLR
Sbjct: 384 RSSSEDSDQAHKRLR 398
>gi|147818235|emb|CAN73549.1| hypothetical protein VITISV_038183 [Vitis vinifera]
Length = 549
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 163/308 (52%), Positives = 211/308 (68%), Gaps = 22/308 (7%)
Query: 3 TTKGNREEEDYEDDEFMSKKEAASNITNSNAK-DGKNSDKASVI-RSKHSVTEQRRRSKI 60
+ KG +EEE+ +++EF+ KKE++SN + K DGK+SD+ +V RSKHS TEQRRRSKI
Sbjct: 213 SAKGTQEEEEEDEEEFVLKKESSSNKGDLTVKVDGKSSDQKAVTPRSKHSATEQRRRSKI 272
Query: 61 NER--FQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPW 118
N+R FQ+LR++IPHSDQKRD ASFLLEVIEY+Q+LQEKV KYE S+Q W+ E KLMPW
Sbjct: 273 NDRRVFQMLRDLIPHSDQKRDKASFLLEVIEYIQFLQEKVHKYEGSFQGWNHESAKLMPW 332
Query: 119 RNSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIAC 178
RNSH ++FA Q I +GSGP MF KFD+N++++SP + +TQ PVESD +
Sbjct: 333 RNSHRPAESFADQSRGINSGSGPALMFSAKFDENNVAVSPNISRNTQNPVESDLSASTTF 392
Query: 179 KPMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQ-------------- 224
K MDR P + NK + I M LQ N+ P L R DA+
Sbjct: 393 KAMDRHPGLTNKAVPIHMQLQPNIFTPVVGGGGLAQLPPRLAPDAENMASLPQSQLWQSR 452
Query: 225 ---SNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQ 281
+ EC +D + +Q ELT+EGGTI+ISS YSQGLLN LTQAL+S+G+DLS+A+ISVQ
Sbjct: 453 SSVTTECTVASDKLKEQ-ELTIEGGTISISSAYSQGLLNTLTQALQSSGVDLSKASISVQ 511
Query: 282 IDLGKRAN 289
IDLG +AN
Sbjct: 512 IDLGNKAN 519
>gi|255547079|ref|XP_002514597.1| Transcription factor BIM1, putative [Ricinus communis]
gi|223546201|gb|EEF47703.1| Transcription factor BIM1, putative [Ricinus communis]
Length = 567
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 169/339 (49%), Positives = 221/339 (65%), Gaps = 24/339 (7%)
Query: 14 EDDEFMSKKEAASNITNSNAK---DGKNSD-KASVIRSKHSVTEQRRRSKINERFQILRE 69
E++EF+ KKE S I + DGK++D KA+ RSKHS TEQRRRSKIN+RFQ+LRE
Sbjct: 229 EEEEFVLKKETPSPIRKGELRVKVDGKSTDQKANTPRSKHSATEQRRRSKINDRFQMLRE 288
Query: 70 IIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFA 129
+IPH DQKRD ASFLLEVIEY+Q+L EKV KYE SYQ W+ EP KL+PWRN V+++
Sbjct: 289 LIPHGDQKRDKASFLLEVIEYIQFLHEKVHKYEGSYQRWNNEPAKLVPWRNGSRSVESYV 348
Query: 130 TQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACKPMDRQPEVAN 189
Q +G+ P +F K ++ +I++SP++ S Q VESD N +D P + N
Sbjct: 349 DQSRGSNSGASPALLFAAKLEEKNINLSPSVPGSAQNRVESDVNSATTFM-VDHYPGMTN 407
Query: 190 KGISISMPLQGNLPAPARSDSVLLHPLQRPVSD---------AQSNECPATT-------D 233
KG+ + LQ N R+ + R VSD +QSN+ + T D
Sbjct: 408 KGMPFPVSLQPNFFNCGRNGGAVAQLPPRLVSDVENTASQPESQSNQTRSCTTEGAVAVD 467
Query: 234 TMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRANRGLM 293
+ +Q +L++EGGTINISS+YSQGLLN LTQAL+S+G+DLSQA+ISVQIDLGKRANR
Sbjct: 468 KLKEQ-QLSIEGGTINISSVYSQGLLNTLTQALQSSGVDLSQASISVQIDLGKRANRQSN 526
Query: 294 PEASVAKDLENPPSINQAMAKLRDVSSGEDSDHSQKRLR 332
S+ KD E PS NQ + R VSSGE+SDH+ K+L+
Sbjct: 527 IPTSINKDNE-VPSCNQGTIRPR-VSSGEESDHALKKLK 563
>gi|356562652|ref|XP_003549583.1| PREDICTED: transcription factor BIM1-like [Glycine max]
Length = 566
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 164/344 (47%), Positives = 214/344 (62%), Gaps = 22/344 (6%)
Query: 7 NREEEDYEDDE-FMSKKEAASNITNS--NAKDGKNSD-KASVIRSKHSVTEQRRRSKINE 62
N ++E E +E F KKE +SN D K++D K + RSKHS TEQRRRSKIN+
Sbjct: 223 NAQDEVLESEETFFLKKEPSSNTQRELRVKVDAKSTDQKPNTPRSKHSATEQRRRSKIND 282
Query: 63 RFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSH 122
RFQ+LRE+IPHSDQKRD ASFLLEV+EY+ +LQEKV KYE S+Q WS EP KLMPWRN+
Sbjct: 283 RFQMLRELIPHSDQKRDKASFLLEVVEYIHFLQEKVHKYEGSFQGWSNEPEKLMPWRNND 342
Query: 123 WRVQNFATQPHAIKNGSGPGS--MFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACKP 180
+ F QP NGS P +F K D+ +I++S T+ STQ VES + K
Sbjct: 343 KPAETF--QPRGTDNGSSPSPTLLFASKVDEKNITISQTIPGSTQN-VESGLSSATTPKT 399
Query: 181 MDRQPEVANKGISISMPLQGNLPAPAR---SDSVLLHPLQRPVSDAQ------SNECPAT 231
MD + NK I +P Q N P + V+ R SDA+ S EC
Sbjct: 400 MDHHAGMMNKAFPIPIPSQLNFFTPTQIGGPGGVVSQLTHRSASDAEKTKYQPSVECQTM 459
Query: 232 TDTMN--QQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRAN 289
T T +++ELT+EGG I+ISS+YS+GLL+ LT AL+S+G+DLSQA+ISVQI+LGK+AN
Sbjct: 460 TATNEKLKEKELTIEGGAISISSVYSKGLLHTLTHALQSSGVDLSQASISVQIELGKQAN 519
Query: 290 -RGLMPEASVAKDLENPPSINQAMAKLRDVSSGEDSDHSQKRLR 332
R +P + A + S NQ M + R SSG+ SD + K+L+
Sbjct: 520 IRPSVPVSVCAAKDGDVHSNNQKMMRSRVASSGK-SDQAVKKLK 562
>gi|356511566|ref|XP_003524496.1| PREDICTED: transcription factor BIM1-like [Glycine max]
Length = 548
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 163/349 (46%), Positives = 211/349 (60%), Gaps = 36/349 (10%)
Query: 1 MRTTKGNREEEDYEDDE-FMSKKEAASNITNSN---AKDGKNSD-KASVIRSKHSVTEQR 55
M++ + + + E E +E F KKE +SN + DGK++D K + RSKHS TEQR
Sbjct: 215 MKSARDSAQNEVLESEETFFLKKEPSSNTQRAELLVKVDGKSTDQKPNTPRSKHSATEQR 274
Query: 56 RRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKL 115
RRSKIN+RFQ+LRE+IPHSDQKRD ASFLLEVIEY+ +LQEKV KYE S+Q WS EP +L
Sbjct: 275 RRSKINDRFQMLRELIPHSDQKRDKASFLLEVIEYIHFLQEKVHKYEGSFQGWSNEPERL 334
Query: 116 MPWRNSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRD 175
MPWRN+ ++F QP NGS P SPT+ STQ VES +
Sbjct: 335 MPWRNNDKPAESF--QPRGTDNGSSP---------------SPTIPGSTQN-VESGLSTA 376
Query: 176 IACKPMDRQPEVANKGISISMPLQGNLPAPAR---SDSVLLHPLQRPVSDAQ------SN 226
K MD Q NK I +P Q N P + V+ R SDA+ S
Sbjct: 377 TTSKTMDHQAGKMNKAFPIPIPSQLNFFTPTQIGGPGGVVSQLTHRSASDAENTKYQPSV 436
Query: 227 ECPATTDTMN--QQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDL 284
EC T T +++ELT+EGG I+ISS+YS+GLL+ LT AL+S+G+DLSQA+ISVQI+L
Sbjct: 437 ECQTMTATNEKLKEKELTIEGGAISISSVYSKGLLHTLTHALQSSGVDLSQASISVQIEL 496
Query: 285 GKRAN-RGLMPEASVAKDLENPPSINQAMAKLRDVSSGEDSDHSQKRLR 332
GK+AN R +P + PS NQ M + R SSG+ SD + K+L+
Sbjct: 497 GKQANIRSNVPVSVCGAKDGAVPSNNQKMMRSRVASSGK-SDQAVKKLK 544
>gi|449525710|ref|XP_004169859.1| PREDICTED: transcription factor BIM1-like, partial [Cucumis
sativus]
Length = 545
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 153/351 (43%), Positives = 209/351 (59%), Gaps = 25/351 (7%)
Query: 1 MRTTKGNREEEDYEDD-EFMSKKEAAS-NITNSNAK-DGKNSD-KASVIRSKHSVTEQRR 56
+++ K ++E+ +DD +F+ KKE ++ N K DG +SD KA+ RSKHS TEQRR
Sbjct: 196 LKSAKSTSQDEELDDDGDFVIKKETSTANKGGLRIKVDGNSSDQKANTPRSKHSATEQRR 255
Query: 57 RSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLM 116
RSKIN+RFQ+LR +IPHSDQKRD ASFLLEV+EY+Q+LQEKVQKYE SYQ+W+ E KL+
Sbjct: 256 RSKINDRFQMLRGLIPHSDQKRDKASFLLEVVEYIQFLQEKVQKYEGSYQEWNHEMAKLV 315
Query: 117 PWRNSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDI 176
P RN+ + Q I +GS P + KF + + +SP + S V+SD +
Sbjct: 316 PLRNNQRSADVYNDQSRGINSGSVPALVLAAKFIEKNSPLSPIVPGSAHNAVDSDTSSAS 375
Query: 177 ACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVL---------------LHPLQRPVS 221
K +D + + M + L A R +V+ L P R
Sbjct: 376 TLKAVDHHSGRTSNAVQFPMSIPPKLSASTRDGNVVPQPPKPLSSGMDHSSLRPEIRSCE 435
Query: 222 DAQSNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQ 281
N A M ++++LT+EGGTINISS+YSQGLLN LT AL+S+G+DLSQA ISVQ
Sbjct: 436 ARCFNSDVAVASEMQKEQDLTIEGGTINISSVYSQGLLNTLTHALQSSGVDLSQARISVQ 495
Query: 282 IDLGKRANRGLMPEASVAKDLENPPSINQAMAKLRDVSSGEDSDHSQKRLR 332
I+LGKRA+R + AS+ KD + M R VS EDS+ + K+L+
Sbjct: 496 IELGKRASRRAISPASIVKDAN-----DMGMMHAR-VSGTEDSERATKKLK 540
>gi|449440880|ref|XP_004138212.1| PREDICTED: transcription factor BIM1-like [Cucumis sativus]
Length = 556
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 153/352 (43%), Positives = 211/352 (59%), Gaps = 27/352 (7%)
Query: 1 MRTTKGNREEEDYEDD-EFMSKKEAAS-NITNSNAK-DGKNSD-KASVIRSKHSVTEQRR 56
+++ K ++E+ +DD +F+ KKE ++ N K DG +SD KA+ RSKHS TEQRR
Sbjct: 207 LKSAKSTSQDEELDDDGDFVIKKETSTANKGGLRIKVDGNSSDQKANTPRSKHSATEQRR 266
Query: 57 RSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLM 116
RSKIN+RFQ+LR +IPHSDQKRD ASFLLEV+EY+Q+LQEKVQKYE SYQ+W+ E KL+
Sbjct: 267 RSKINDRFQMLRGLIPHSDQKRDKASFLLEVVEYIQFLQEKVQKYEGSYQEWNHEMAKLV 326
Query: 117 PWRNSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDI 176
P RN+ + Q I +GS P + KF + + +SP + S V+SD +
Sbjct: 327 PLRNNQRSADVYNDQSRGINSGSVPALVLAAKFIEKNSPLSPIVPGSAHNAVDSDTSSAS 386
Query: 177 ACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQS----------- 225
K +D + + M + L A R +V+ P +P+S
Sbjct: 387 TLKAVDHHSGRTSNAVQFPMSIPPKLSASTRDGNVVPQP-PKPLSSGMDHSSLRPEIRSC 445
Query: 226 -----NECPATTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISV 280
N A M ++++LT+EGGTINISS+YSQGLLN LT AL+S+G+DLSQA ISV
Sbjct: 446 EARCFNSDVAVASEMQKEQDLTIEGGTINISSVYSQGLLNTLTHALQSSGVDLSQARISV 505
Query: 281 QIDLGKRANRGLMPEASVAKDLENPPSINQAMAKLRDVSSGEDSDHSQKRLR 332
QI+LGKRA+R + AS+ KD + M R VS EDS+ + K+L+
Sbjct: 506 QIELGKRASRRAISPASIVKDAN-----DMGMMHAR-VSGTEDSERATKKLK 551
>gi|118483269|gb|ABK93537.1| unknown [Populus trichocarpa]
Length = 357
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 153/336 (45%), Positives = 206/336 (61%), Gaps = 28/336 (8%)
Query: 18 FMSKKEAASNITNSNAK---DGKNSD-KASVIRSKHSVTEQRRRSKINERFQILREIIPH 73
F+ KKE S I + DGK++D K RSKHS TEQRRRSKIN+RFQ+LRE+IP
Sbjct: 20 FLLKKETPSPIRKGELRVKVDGKSNDQKPDTPRSKHSATEQRRRSKINDRFQMLRELIPR 79
Query: 74 SDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFATQPH 133
DQK+D ASFLLEVIEY+Q+LQEKVQKY+ SYQ W+ E KL+PW+N+ V++ Q
Sbjct: 80 GDQKKDKASFLLEVIEYIQFLQEKVQKYDGSYQGWNHETAKLVPWKNNSRPVESSVDQSR 139
Query: 134 AIKNGSGPGSMFPGKFDDNSISMSPTM-LTSTQTPVESDPNRDIACKPMDRQPEVANKGI 192
+ + +GP +F K D+ +I++SP++ + PVESD + MDR P NK I
Sbjct: 140 GLNSDAGPALLFAAKLDERNITVSPSINPGGARNPVESDMT---SANAMDRHPGCTNKSI 196
Query: 193 SISMPLQGNLPAPARSDSVLLHPLQRPVSDA-------QSNECPA---------TTDTMN 236
+ LQ N P R+ R SDA Q C A +D +
Sbjct: 197 PFPISLQPNF-NPGRTAGAAAQFPPRLASDAENMASQTQPQSCHARSWSTVEAVASDKL- 254
Query: 237 QQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRANRGLMPEA 296
++++LTVEGGTI+IS+ YSQGL+N LTQAL+S+G+DLS+A+ISVQI+LGK N
Sbjct: 255 KEKDLTVEGGTISISNAYSQGLVNTLTQALQSSGVDLSRASISVQIELGKTGNSRQTAST 314
Query: 297 SVAKDLENPPSINQAMAKLRDVSSGEDSDHSQKRLR 332
S+ KD PS N+ + R VSSGE+S + K+L+
Sbjct: 315 SITKDNNVLPS-NKGTTRSR-VSSGEESGQALKKLK 348
>gi|356526565|ref|XP_003531887.1| PREDICTED: transcription factor BIM3-like [Glycine max]
Length = 339
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 136/304 (44%), Positives = 186/304 (61%), Gaps = 27/304 (8%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
RSKHS TEQRRRSKINERFQ+LR++IP +DQKRD ASFLLEVIEY+Q+LQEK+Q YE +Y
Sbjct: 44 RSKHSETEQRRRSKINERFQVLRDLIPQNDQKRDKASFLLEVIEYIQFLQEKIQIYEQTY 103
Query: 106 QDWSAEPTKLMPWRNSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQ 165
+ W+ EPTKL PWRN H +N A +NGS D+ + ++SP + + Q
Sbjct: 104 EGWNQEPTKLTPWRNHHGPAENTTDPSQASQNGS---------VDEKNNNVSPLLPKNVQ 154
Query: 166 TPVESDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSD--- 222
+ESD + K D P + + + M ++ ++ P S + LQ PVS+
Sbjct: 155 NLIESDFSMTTIQK--DHTPGSTTEAVPLPMQMRLDMFDPIVSSGMATQHLQEPVSNVNM 212
Query: 223 -------------AQSNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESA 269
++ N DTM +QEEL +E G+ +ISS YSQG+L++LTQAL S+
Sbjct: 213 PSHTQPQLWLNKQSKGNYIVPHNDTMKEQEELVIESGSDSISSAYSQGILDSLTQALHSS 272
Query: 270 GIDLSQANISVQIDLGKRANRGLMPEASVAKDLENPPSINQAMAKLRDVSSGEDSDHSQK 329
G+D+SQ N+SVQID+G+RAN GL+P A +K EN N A+A+ DS+ S K
Sbjct: 273 GVDMSQTNVSVQIDVGRRANSGLIPSAYTSKGHENQFVSNPAIARSGVDYCNIDSEQSSK 332
Query: 330 RLRK 333
RLR+
Sbjct: 333 RLRQ 336
>gi|358248032|ref|NP_001240051.1| uncharacterized protein LOC100792653 [Glycine max]
gi|255642004|gb|ACU21269.1| unknown [Glycine max]
Length = 340
Score = 234 bits (596), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 135/304 (44%), Positives = 185/304 (60%), Gaps = 27/304 (8%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
RSKHS TEQRRRSKINERFQ+LR++IP +DQKRD ASFLLEVIEY+Q+LQEK+Q YE +Y
Sbjct: 45 RSKHSETEQRRRSKINERFQVLRDLIPQNDQKRDKASFLLEVIEYIQFLQEKLQIYEQTY 104
Query: 106 QDWSAEPTKLMPWRNSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQ 165
+ W+ EPTKL PWRN+H +N A +NGS D+ + ++SP + + Q
Sbjct: 105 EGWNQEPTKLTPWRNNHGPAENTTDPSQATQNGS---------VDEKNNNVSPLLPKNVQ 155
Query: 166 TPVESDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDA-- 223
P+ESD + K P + + + M ++ ++ P S S+ L PVS+
Sbjct: 156 NPIESDFSMTTIQK--GNIPGSTTEAVPLPMQMRLDMFDPVVSSSMATQHLLEPVSNVNM 213
Query: 224 --------------QSNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESA 269
+ N DTM +QEEL E G+ +ISS YSQG+L++LTQAL S+
Sbjct: 214 LSHTQPQLWLDKRNKGNYILPHNDTMKEQEELVNESGSDSISSAYSQGILDSLTQALHSS 273
Query: 270 GIDLSQANISVQIDLGKRANRGLMPEASVAKDLENPPSINQAMAKLRDVSSGEDSDHSQK 329
G+D+SQ N+SVQID+G++ N GL+P AS +K EN N A+A+ DS+ S K
Sbjct: 274 GVDMSQTNVSVQIDVGRQENAGLIPSASTSKGHENQSVSNPAIARSGVDYCNIDSEQSSK 333
Query: 330 RLRK 333
RLR+
Sbjct: 334 RLRQ 337
>gi|224118988|ref|XP_002317958.1| predicted protein [Populus trichocarpa]
gi|222858631|gb|EEE96178.1| predicted protein [Populus trichocarpa]
Length = 600
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 156/369 (42%), Positives = 207/369 (56%), Gaps = 62/369 (16%)
Query: 18 FMSKKEAASNITNSNAK---DGKNSD-KASVIRSKHSVTEQRRRSKINER---------- 63
F+ KKE S I + DGK++D K RSKHS TEQRRRSKIN+R
Sbjct: 231 FLLKKETPSPIRKGELRVKVDGKSNDQKPDTPRSKHSATEQRRRSKINDRHLHNVVDLLE 290
Query: 64 ----FQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWR 119
FQ+LRE+IP DQK+D ASFLLEVIEY+Q+LQEKVQKY+ SYQ W+ E KL+PW
Sbjct: 291 AKFRFQMLRELIPRGDQKKDKASFLLEVIEYIQFLQEKVQKYDGSYQGWNHETAKLVPWS 350
Query: 120 NSHWRVQNFATQPHAI--KNGS-----------------GPGSMFPGKFDDNSISMSPTM 160
++ + N PH++ KN S GP +F K D+ +I++SP++
Sbjct: 351 DARYYC-NLTVDPHSLRQKNNSRPVESSVDQSRGLNSDAGPALLFAAKLDERNITVSPSI 409
Query: 161 -LTSTQTPVESDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRP 219
+ PVESD + MDR P NK I + LQ N P R+ R
Sbjct: 410 NPGGARNPVESDM---TSANAMDRHPGFTNKSIPFPISLQPNF-NPGRTAGAAAQFPPRL 465
Query: 220 VSDA-------QSNECPA---------TTDTMNQQEELTVEGGTINISSIYSQGLLNNLT 263
SDA Q C A +D + ++++LTVEGGTI+IS+ YSQGL+N LT
Sbjct: 466 ASDAENMASQTQPQSCHARSWSTVEAVASDKL-KEKDLTVEGGTISISNAYSQGLVNTLT 524
Query: 264 QALESAGIDLSQANISVQIDLGKRANRGLMPEASVAKDLENPPSINQAMAKLRDVSSGED 323
QAL+S+G+DLS+A+ISVQI+LGK N S+ KD PS N+ + R VSSGE+
Sbjct: 525 QALQSSGVDLSRASISVQIELGKTGNSRQTASTSITKDNNVLPS-NKGTTRSR-VSSGEE 582
Query: 324 SDHSQKRLR 332
S + K+L+
Sbjct: 583 SGQALKKLK 591
>gi|312165807|gb|ADQ38902.1| bHLH transcription factor [Musa acuminata AAA Group]
Length = 331
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 138/337 (40%), Positives = 197/337 (58%), Gaps = 38/337 (11%)
Query: 14 EDDEFMSKKEAASNITNSNAKDGKNSDKA----SVIRSKHSVTEQRRRSKINERFQILRE 69
++DE +E++ + + DGK+S++ + RSKHS TEQRRR KIN+RFQILR+
Sbjct: 10 DEDEMGRAQESSRRVELTVKVDGKSSEQKPGTPTTPRSKHSATEQRRRCKINDRFQILRD 69
Query: 70 IIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFA 129
+IPHSDQKRD ASFLLEVIEY+++LQEKVQKYE S+ W+ E KLMPW ++
Sbjct: 70 LIPHSDQKRDKASFLLEVIEYIKFLQEKVQKYE-SFPGWNQENEKLMPWSSNQGPGDGMV 128
Query: 130 TQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACKPMDRQPEVAN 189
P+ KNGS G +F GKF D+SI +P L++ E+D +
Sbjct: 129 DPPNLTKNGSQSGHLFSGKFVDSSIPGAPMSLSNAHNVAEADMSPG-------------- 174
Query: 190 KGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQS---------------NECPATTDT 234
++ +P+Q N A S + P +R +SD+ + +C ++
Sbjct: 175 ---AVLVPMQSNYYASVGRGSGFMQPQERVISDSDNPVSQSQSEWQSSSCMADCNLSSGM 231
Query: 235 MNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRAN-RGLM 293
+N+ EEL ++ GTI+ISS+YSQGLL L+QA+ S+G+DLSQA+ISVQI+LGK A+ R
Sbjct: 232 LNEHEELIIDEGTISISSVYSQGLLTALSQAMASSGVDLSQASISVQINLGKGASKRPTT 291
Query: 294 PEASVAKDLENPPSINQAMAKLRDVSSGEDSDHSQKR 330
S AKD + I+Q M S+ E+S+ KR
Sbjct: 292 ANMSNAKDHSDNSHIHQIMGNTVPGSNIEESEQVPKR 328
>gi|19310568|gb|AAL85017.1| putative DNA-binding protein [Arabidopsis thaliana]
Length = 220
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 114/211 (54%), Positives = 143/211 (67%), Gaps = 18/211 (8%)
Query: 91 VQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFATQPHAIKNGSGPGSMFPGKFD 150
QYLQEKVQKYE SY WS EPTKL PWRN+HWRVQ+ P AI NGSGPG FPGKF+
Sbjct: 1 FQYLQEKVQKYEGSYPGWSQEPTKLTPWRNNHWRVQSLGNHPVAINNGSGPGIPFPGKFE 60
Query: 151 DNSISMSPTMLTSTQTPVESDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDS 210
DN+++ +P ++ Q P+ESD R I ++ QPE+ +KG+ PLQ LP
Sbjct: 61 DNTVTSTPAIIAEPQIPIESDKARAITGISIESQPELDDKGLP---PLQPILPM------ 111
Query: 211 VLLHPLQRPVSDAQSNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAG 270
V Q+NECPAT+D + Q +L +EGGTI+ISS YS LL++LTQAL++AG
Sbjct: 112 ---------VQGEQANECPATSDGLGQSNDLVIEGGTISISSAYSHELLSSLTQALQNAG 162
Query: 271 IDLSQANISVQIDLGKRANRGLMPEASVAKD 301
IDLSQA +SVQIDLGKRAN+GL E +K+
Sbjct: 163 IDLSQAKLSVQIDLGKRANQGLTHEEPSSKN 193
>gi|224034401|gb|ACN36276.1| unknown [Zea mays]
gi|414885908|tpg|DAA61922.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 340
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 135/316 (42%), Positives = 185/316 (58%), Gaps = 40/316 (12%)
Query: 35 DGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYL 94
DG + + RSKHS TEQRRRSKIN+RFQILRE++PHSDQKRD A+FLLEVIEY+++L
Sbjct: 45 DGGTDQRPNTPRSKHSATEQRRRSKINDRFQILRELLPHSDQKRDKATFLLEVIEYIRFL 104
Query: 95 QEKVQKYEVSYQDWSAEPTKLMPWRN----SHWRVQNFATQ---------PHAIKNGSGP 141
QEKVQKYE ++ +W+ E K++PW N S W+ Q H ++NGS P
Sbjct: 105 QEKVQKYEATFPEWNQENAKMLPWSNMYFRSFWKNAQSKGQISGDSPPDPSHFMRNGSSP 164
Query: 142 GSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACKPMDRQPEVANKGISISMPLQGN 201
GS F GK DDN ++ + Q VE+D + + N +S S P Q
Sbjct: 165 GSNFTGKLDDNHNIVTSAAASGAQDQVETDHMASGCYRSAETTANFTNNAMSQSQP-QWT 223
Query: 202 LPAPARSDSVLLHPLQRPVSDAQSNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNN 261
P+ PV D+ N ++T+N Q +L ++ GTI +SS YSQ LLN+
Sbjct: 224 GPS--------------PVDDSAVN-----SETLNNQ-QLVIDEGTIRVSSNYSQELLNS 263
Query: 262 LTQALESAGIDLSQANISVQIDLGKRANRGLMPEASV---AKDLENPPSINQAMAKLRDV 318
LT AL+S+G+DLSQANISVQI++GKRA + P A V +K+ +P S N+ +L
Sbjct: 264 LTHALQSSGVDLSQANISVQINMGKRAAK--RPAAGVSSNSKEPADPASSNELGHQLTLS 321
Query: 319 SSGEDS-DHSQKRLRK 333
+G D H+ KR ++
Sbjct: 322 GAGADCLSHATKRHKR 337
>gi|224031031|gb|ACN34591.1| unknown [Zea mays]
gi|414885909|tpg|DAA61923.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 327
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 131/303 (43%), Positives = 181/303 (59%), Gaps = 27/303 (8%)
Query: 35 DGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYL 94
DG + + RSKHS TEQRRRSKIN+RFQILRE++PHSDQKRD A+FLLEVIEY+++L
Sbjct: 45 DGGTDQRPNTPRSKHSATEQRRRSKINDRFQILRELLPHSDQKRDKATFLLEVIEYIRFL 104
Query: 95 QEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSI 154
QEKVQKYE ++ +W+ E K++PW + H ++NGS PGS F GK DDN
Sbjct: 105 QEKVQKYEATFPEWNQENAKMLPWSKGQISGDSPPDPSHFMRNGSSPGSNFTGKLDDNHN 164
Query: 155 SMSPTMLTSTQTPVESDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVLLH 214
++ + Q VE+D + + N +S S P Q P+
Sbjct: 165 IVTSAAASGAQDQVETDHMASGCYRSAETTANFTNNAMSQSQP-QWTGPS---------- 213
Query: 215 PLQRPVSDAQSNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLS 274
PV D+ N ++T+N Q +L ++ GTI +SS YSQ LLN+LT AL+S+G+DLS
Sbjct: 214 ----PVDDSAVN-----SETLNNQ-QLVIDEGTIRVSSNYSQELLNSLTHALQSSGVDLS 263
Query: 275 QANISVQIDLGKRANRGLMPEASV---AKDLENPPSINQAMAKLRDVSSGEDS-DHSQKR 330
QANISVQI++GKRA + P A V +K+ +P S N+ +L +G D H+ KR
Sbjct: 264 QANISVQINMGKRAAK--RPAAGVSSNSKEPADPASSNELGHQLTLSGAGADCLSHATKR 321
Query: 331 LRK 333
++
Sbjct: 322 HKR 324
>gi|195614198|gb|ACG28929.1| transcription factor BIM2 [Zea mays]
Length = 514
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 138/346 (39%), Positives = 198/346 (57%), Gaps = 49/346 (14%)
Query: 14 EDDEFMSKKEAASNITN---------SNAKDGKNSDKASVIRSKHSVTEQRRRSKINERF 64
+DD +++E +S++ + + DG + + RSKHS TEQRRRSKIN+RF
Sbjct: 189 DDDGLTTRREVSSSLQDLTVRVDRKGGSCSDGGTDQRPNTPRSKHSATEQRRRSKINDRF 248
Query: 65 QILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWR 124
QILRE++PHSDQKRD A+FLLEVIEY+++LQEKVQKYE ++ +W+ E K++PW N ++R
Sbjct: 249 QILRELLPHSDQKRDKATFLLEVIEYIRFLQEKVQKYEATFPEWNQENAKMLPWSNMYFR 308
Query: 125 V---------QNFATQP----HAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESD 171
Q P H ++NGS PGS F GK DDN ++ + Q E+D
Sbjct: 309 SFWKNAQSKGQISGDSPPDPSHFMRNGSSPGSNFTGKLDDNHNIVTSAAASGAQDQAETD 368
Query: 172 PNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPAT 231
+ + N +S S P Q P+ PV D+ N
Sbjct: 369 HMASGCYRSAETTANFTNNAMSQSQP-QWTGPS--------------PVDDSAMN----- 408
Query: 232 TDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRANRG 291
++T+N Q +L ++ GTI +SS YSQ LLN+LT AL+S+G+DLSQANISVQI++GKRA +
Sbjct: 409 SETLNNQ-QLVIDEGTIRVSSNYSQELLNSLTHALQSSGVDLSQANISVQINMGKRAAK- 466
Query: 292 LMPEASV---AKDLENPPSINQAMAKLRDVSSGEDS-DHSQKRLRK 333
P A V +K+ +P S N+ +L +G D H+ KR ++
Sbjct: 467 -RPAAGVSSNSKEPADPASSNELGHQLTLSGAGADGLSHATKRHKR 511
>gi|219884443|gb|ACL52596.1| unknown [Zea mays]
gi|414885905|tpg|DAA61919.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 515
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 135/316 (42%), Positives = 186/316 (58%), Gaps = 40/316 (12%)
Query: 35 DGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYL 94
DG + + RSKHS TEQRRRSKIN+RFQILRE++PHSDQKRD A+FLLEVIEY+++L
Sbjct: 220 DGGTDQRPNTPRSKHSATEQRRRSKINDRFQILRELLPHSDQKRDKATFLLEVIEYIRFL 279
Query: 95 QEKVQKYEVSYQDWSAEPTKLMPWRNSHWRV---------QNFATQP----HAIKNGSGP 141
QEKVQKYE ++ +W+ E K++PW N ++R Q P H ++NGS P
Sbjct: 280 QEKVQKYEATFPEWNQENAKMLPWSNMYFRSFWKNAQSKGQISGDSPPDPSHFMRNGSSP 339
Query: 142 GSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACKPMDRQPEVANKGISISMPLQGN 201
GS F GK DDN ++ + Q VE+D + + N +S S P Q
Sbjct: 340 GSNFTGKLDDNHNIVTSAAASGAQDQVETDHMASGCYRSAETTANFTNNAMSQSQP-QWT 398
Query: 202 LPAPARSDSVLLHPLQRPVSDAQSNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNN 261
P+ PV D+ N ++T+N Q +L ++ GTI +SS YSQ LLN+
Sbjct: 399 GPS--------------PVDDSAVN-----SETLNNQ-QLVIDEGTIRVSSNYSQELLNS 438
Query: 262 LTQALESAGIDLSQANISVQIDLGKRANRGLMPEASV---AKDLENPPSINQAMAKLRDV 318
LT AL+S+G+DLSQANISVQI++GKRA + P A V +K+ +P S N+ +L
Sbjct: 439 LTHALQSSGVDLSQANISVQINMGKRAAK--RPAAGVSSNSKEPADPASSNELGHQLTLS 496
Query: 319 SSGEDS-DHSQKRLRK 333
+G D H+ KR ++
Sbjct: 497 GAGADCLSHATKRHKR 512
>gi|414885906|tpg|DAA61920.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 514
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 135/316 (42%), Positives = 186/316 (58%), Gaps = 40/316 (12%)
Query: 35 DGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYL 94
DG + + RSKHS TEQRRRSKIN+RFQILRE++PHSDQKRD A+FLLEVIEY+++L
Sbjct: 219 DGGTDQRPNTPRSKHSATEQRRRSKINDRFQILRELLPHSDQKRDKATFLLEVIEYIRFL 278
Query: 95 QEKVQKYEVSYQDWSAEPTKLMPWRNSHWRV---------QNFATQP----HAIKNGSGP 141
QEKVQKYE ++ +W+ E K++PW N ++R Q P H ++NGS P
Sbjct: 279 QEKVQKYEATFPEWNQENAKMLPWSNMYFRSFWKNAQSKGQISGDSPPDPSHFMRNGSSP 338
Query: 142 GSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACKPMDRQPEVANKGISISMPLQGN 201
GS F GK DDN ++ + Q VE+D + + N +S S P Q
Sbjct: 339 GSNFTGKLDDNHNIVTSAAASGAQDQVETDHMASGCYRSAETTANFTNNAMSQSQP-QWT 397
Query: 202 LPAPARSDSVLLHPLQRPVSDAQSNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNN 261
P+ PV D+ N ++T+N Q +L ++ GTI +SS YSQ LLN+
Sbjct: 398 GPS--------------PVDDSAVN-----SETLNNQ-QLVIDEGTIRVSSNYSQELLNS 437
Query: 262 LTQALESAGIDLSQANISVQIDLGKRANRGLMPEASV---AKDLENPPSINQAMAKLRDV 318
LT AL+S+G+DLSQANISVQI++GKRA + P A V +K+ +P S N+ +L
Sbjct: 438 LTHALQSSGVDLSQANISVQINMGKRAAK--RPAAGVSSNSKEPADPASSNELGHQLTLS 495
Query: 319 SSGEDS-DHSQKRLRK 333
+G D H+ KR ++
Sbjct: 496 GAGADCLSHATKRHKR 511
>gi|212275063|ref|NP_001130805.1| uncharacterized protein LOC100191909 [Zea mays]
gi|194690162|gb|ACF79165.1| unknown [Zea mays]
gi|414885907|tpg|DAA61921.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 478
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 135/316 (42%), Positives = 186/316 (58%), Gaps = 40/316 (12%)
Query: 35 DGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYL 94
DG + + RSKHS TEQRRRSKIN+RFQILRE++PHSDQKRD A+FLLEVIEY+++L
Sbjct: 183 DGGTDQRPNTPRSKHSATEQRRRSKINDRFQILRELLPHSDQKRDKATFLLEVIEYIRFL 242
Query: 95 QEKVQKYEVSYQDWSAEPTKLMPWRNSHWRV---------QNFATQP----HAIKNGSGP 141
QEKVQKYE ++ +W+ E K++PW N ++R Q P H ++NGS P
Sbjct: 243 QEKVQKYEATFPEWNQENAKMLPWSNMYFRSFWKNAQSKGQISGDSPPDPSHFMRNGSSP 302
Query: 142 GSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACKPMDRQPEVANKGISISMPLQGN 201
GS F GK DDN ++ + Q VE+D + + N +S S P Q
Sbjct: 303 GSNFTGKLDDNHNIVTSAAASGAQDQVETDHMASGCYRSAETTANFTNNAMSQSQP-QWT 361
Query: 202 LPAPARSDSVLLHPLQRPVSDAQSNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNN 261
P+ PV D+ N ++T+N Q +L ++ GTI +SS YSQ LLN+
Sbjct: 362 GPS--------------PVDDSAVN-----SETLNNQ-QLVIDEGTIRVSSNYSQELLNS 401
Query: 262 LTQALESAGIDLSQANISVQIDLGKRANRGLMPEASV---AKDLENPPSINQAMAKLRDV 318
LT AL+S+G+DLSQANISVQI++GKRA + P A V +K+ +P S N+ +L
Sbjct: 402 LTHALQSSGVDLSQANISVQINMGKRAAK--RPAAGVSSNSKEPADPASSNELGHQLTLS 459
Query: 319 SSGEDS-DHSQKRLRK 333
+G D H+ KR ++
Sbjct: 460 GAGADCLSHATKRHKR 475
>gi|242045046|ref|XP_002460394.1| hypothetical protein SORBIDRAFT_02g027460 [Sorghum bicolor]
gi|241923771|gb|EER96915.1| hypothetical protein SORBIDRAFT_02g027460 [Sorghum bicolor]
Length = 507
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 133/328 (40%), Positives = 194/328 (59%), Gaps = 34/328 (10%)
Query: 14 EDDEFMSKKEAASNITN---------SNAKDGKNSDKASVIRSKHSVTEQRRRSKINERF 64
+DD +++E +S++ + + DG + + RSKHS TEQRRRSKIN+RF
Sbjct: 197 DDDALTTRREVSSSLQDLTVRVDRKGGSCSDGGTDQRPNTPRSKHSATEQRRRSKINDRF 256
Query: 65 QILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWR 124
QILRE++PH+DQKRD A+FLLEVIEY+++LQEKVQKYE ++ +W+ E K++PW
Sbjct: 257 QILRELLPHNDQKRDKATFLLEVIEYIRFLQEKVQKYEATFPEWNQENAKMLPWSKGQIP 316
Query: 125 VQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACKPMDRQ 184
+ H ++NGS PGS F GK DDN ++ + Q E+D + +
Sbjct: 317 GDSPPDPSHFMRNGSSPGSNFTGKIDDNHNIVTSAAASGAQDQAETDHMASGCYRSAETP 376
Query: 185 PEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPATTDTMNQQEELTVE 244
+ N IS S P Q P+ PV D+ N ++ +N Q +L ++
Sbjct: 377 ANITNNAISQSQP-QWTGPS--------------PVDDSAVN-----SEMLNNQ-QLAID 415
Query: 245 GGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRA-NRGLMPEASVAKDLE 303
GTI++SS YSQ LLN+LT AL+S+G+DLSQA+ISVQI+LGKRA R + P S +K+
Sbjct: 416 EGTISVSSNYSQELLNSLTHALQSSGVDLSQASISVQINLGKRAVKRPVAP--SNSKEPA 473
Query: 304 NPPSINQAMAKLRDVSSGEDS-DHSQKR 330
+P S N+ +L + +G D+ H+ KR
Sbjct: 474 DPASSNELGHQLMMLGAGADNLSHTTKR 501
>gi|224135339|ref|XP_002322046.1| predicted protein [Populus trichocarpa]
gi|222869042|gb|EEF06173.1| predicted protein [Populus trichocarpa]
Length = 285
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 130/283 (45%), Positives = 169/283 (59%), Gaps = 18/283 (6%)
Query: 66 ILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRV 125
+LR +IPH DQKRD ASFLLEVIE+VQ+LQEKVQKYE SYQ W+ E KL PWRN+ V
Sbjct: 1 MLRALIPHGDQKRDKASFLLEVIEHVQFLQEKVQKYEGSYQGWNHEHAKLGPWRNNSRPV 60
Query: 126 QNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTM-LTSTQTPVESDPNRDIACKPMDRQ 184
++ Q + +G GP +F D+ SI++SP++ + VES+ + MD
Sbjct: 61 ESSVDQSRGVNSGVGPALLFAANLDEKSITISPSINPGGARNAVESNMSSASTFNAMDHH 120
Query: 185 PE--VANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDA-----QSNECPATTDTMN- 236
P + NK + + LQ NL P R R DA Q C A + T +
Sbjct: 121 PNLGITNKAMPFPISLQPNLFHPGRIAGAAAQFPPRLAFDAENTATQPQPCHAISCTSDG 180
Query: 237 -------QQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRAN 289
+Q+ LTVEGGTI+IS+ YSQGLLN LTQAL+S+G+DLSQA ISVQI+LGK+ N
Sbjct: 181 AVASDKLKQQNLTVEGGTISISTAYSQGLLNTLTQALQSSGVDLSQATISVQIELGKKGN 240
Query: 290 RGLMPEASVAKDLENPPSINQAMAKLRDVSSGEDSDHSQKRLR 332
S+ KD PPS NQ + R VSSGE+SD + K+L+
Sbjct: 241 SRQTAPTSIVKDNNVPPS-NQGTIRSR-VSSGEESDQALKKLK 281
>gi|255569964|ref|XP_002525945.1| Transcription factor BIM1, putative [Ricinus communis]
gi|223534774|gb|EEF36465.1| Transcription factor BIM1, putative [Ricinus communis]
Length = 311
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/306 (44%), Positives = 185/306 (60%), Gaps = 37/306 (12%)
Query: 35 DGKNSD-KASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQY 93
DGK+S+ KA+ RSKHS TEQRRRSKINERFQILR++IP +DQKRD ASFLLEVIEY+Q+
Sbjct: 31 DGKSSEQKANTHRSKHSETEQRRRSKINERFQILRDLIPQNDQKRDKASFLLEVIEYIQF 90
Query: 94 LQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNS 153
LQEK+ YE +Q W+ EPTKL PW+N H V++ +KNGS P
Sbjct: 91 LQEKLHMYEGPFQGWTQEPTKLTPWKNHHTSVESLVDHSQVLKNGSAP------------ 138
Query: 154 ISMSPTMLTSTQTPVESDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSV-- 211
MLT+ +ESD V + + + +G + A + +SV
Sbjct: 139 --EVTAMLTNVHNSIESDLG-------------VQAQMNTFAAVGRGGITAQSVQESVSD 183
Query: 212 ---LLHPLQRPVSDAQ--SNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQAL 266
+ + LQ + Q ++EC A ++T+N QEE + G +SS +SQG+L+NLTQAL
Sbjct: 184 AENMAYQLQSQLWQGQPCASECTAPSNTVNGQEEQMSKSGL--VSSTFSQGILDNLTQAL 241
Query: 267 ESAGIDLSQANISVQIDLGKRANRGLMPEASVAKDLENPPSINQAMAKLRDVSSGEDSDH 326
+S+G+DLSQ +ISVQID+ K+AN G AS +KD E+ +Q M + S EDSD
Sbjct: 242 QSSGVDLSQTSISVQIDVSKQANSGAAFAASSSKDQESLYLNSQMMEQTGFGSCMEDSDQ 301
Query: 327 SQKRLR 332
++KRLR
Sbjct: 302 ARKRLR 307
>gi|449438737|ref|XP_004137144.1| PREDICTED: transcription factor BIM2-like [Cucumis sativus]
Length = 326
Score = 213 bits (543), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 134/314 (42%), Positives = 184/314 (58%), Gaps = 30/314 (9%)
Query: 35 DGKNSD-KASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQY 93
+GK+ + KAS RSKHS TEQRRRSKINERFQILRE+IP +DQKRD ASFLLEVIEY+Q+
Sbjct: 24 EGKSGESKASGHRSKHSETEQRRRSKINERFQILRELIPQNDQKRDKASFLLEVIEYIQF 83
Query: 94 LQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNS 153
LQEK+ YE S Q WS+EP+KLMPW+N + ++ +K GS +++
Sbjct: 84 LQEKLNMYEGSCQGWSSEPSKLMPWKN-YRAADSYVDHSQVVKRGSN---------HESA 133
Query: 154 ISMSPTMLTSTQTPVESDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVLL 213
+ S MLT+ +++D +D A +G+ +SM Q P S+
Sbjct: 134 VVFSQAMLTNAPNVMDADLGPTAVLNAVDHTLVSATQGLPMSMHTQPIAFDPVGRSSLST 193
Query: 214 HPLQRPVSDA-------QSNECPA----TTDTMNQ----QEELTVEGGTINISSIYSQGL 258
L PVS + Q+ P TT +NQ Q++LT E +IS YS GL
Sbjct: 194 ESLDEPVSGSENISSRTQAELLPGRTCTTTGFLNQAVSDQDDLTPESELESISGAYSHGL 253
Query: 259 LNNLTQALESAGIDLSQANISVQIDLGKRANRGLMPEASVAKDLENPPSINQAMAKLRDV 318
L+ LTQALE++G+DLSQ NISV++D+GKRANR + S+++D + NQ M +
Sbjct: 254 LSTLTQALEASGVDLSQTNISVKVDVGKRANRAI----SLSEDDKQQSLNNQVMGQSIHG 309
Query: 319 SSGEDSDHSQKRLR 332
EDS+ + K+LR
Sbjct: 310 CFSEDSEQAHKKLR 323
>gi|388505752|gb|AFK40942.1| unknown [Lotus japonicus]
Length = 341
Score = 210 bits (534), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 127/306 (41%), Positives = 184/306 (60%), Gaps = 32/306 (10%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
RSKHS TEQRRR KINERFQ+L+++IP + QKRD AS LLEVI+YVQ+LQEK+Q YE S+
Sbjct: 47 RSKHSETEQRRRIKINERFQVLKDLIPQNYQKRDKASLLLEVIQYVQFLQEKLQIYEQSH 106
Query: 106 QDWSAEPTKLMPWRNSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQ 165
+ W+ EPTKL+PWRN H ++ AI+NGS K +D +S + + Q
Sbjct: 107 EGWNQEPTKLIPWRNHHGPAEHTTDPSQAIQNGS-----VIAKNND----ISSLLPQNVQ 157
Query: 166 TPVESDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQS 225
P+ESD + K P A + + ++ ++ ++ P + ++ + P+S+A
Sbjct: 158 NPIESDFSTTTIQK--GHTPCSATEKVPMTKQMRLDVFDPVVNSGLVTQHVLEPLSNA-- 213
Query: 226 NECPATTD------------------TMNQQEELTVEGGTINISSIYSQGLLNNLTQALE 267
P+ T+ T+ +QEELT+E G+ +IS+ YSQ +L+ LTQAL+
Sbjct: 214 -GIPSHTEPQVWLSKPNKDKYIVPDNTLKEQEELTIESGSDSISNAYSQRILDTLTQALQ 272
Query: 268 SAGIDLSQANISVQIDLGKRANRGLMPEASVAKDLENPPSINQAMAKLRDVSSGEDSDHS 327
+G+DLSQA++SVQID+G+R+N GL P +K +N NQ MA EDS+ S
Sbjct: 273 CSGVDLSQASVSVQIDVGRRSNSGLTPSTYSSKGHQNQFLNNQGMACSGGDYCSEDSEQS 332
Query: 328 QKRLRK 333
QKRLR+
Sbjct: 333 QKRLRR 338
>gi|217074638|gb|ACJ85679.1| unknown [Medicago truncatula]
Length = 176
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 102/173 (58%), Positives = 131/173 (75%)
Query: 160 MLTSTQTPVESDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRP 219
ML+ + ++ DP RDI K +RQP++A+KGI + M + N+ P RSD VL HPLQ
Sbjct: 1 MLSGSHNMIDHDPTRDIVGKTAERQPDLASKGIPLPMAMHANMSVPVRSDGVLSHPLQGT 60
Query: 220 VSDAQSNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANIS 279
VSDAQS ECP T++ +NQQ++LTVEGGTI+ISS+YSQGLLNNLTQAL+SAG+DLS+ANIS
Sbjct: 61 VSDAQSTECPTTSEQLNQQDDLTVEGGTISISSVYSQGLLNNLTQALQSAGLDLSKANIS 120
Query: 280 VQIDLGKRANRGLMPEASVAKDLENPPSINQAMAKLRDVSSGEDSDHSQKRLR 332
VQIDLGKRAN+ AS K+ +NP NQ+ A RD +GEDSD +QKR++
Sbjct: 121 VQIDLGKRANKDPSGTASSPKNHDNPLCCNQSFAHFRDGGNGEDSDQAQKRMK 173
>gi|357158929|ref|XP_003578285.1| PREDICTED: transcription factor BIM1-like [Brachypodium distachyon]
Length = 477
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 122/299 (40%), Positives = 175/299 (58%), Gaps = 42/299 (14%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
+SKHS TEQRRRSKIN+RFQILR+++PH+DQKRD A+FLLEVIEY+++LQEK QKYE S+
Sbjct: 201 KSKHSATEQRRRSKINDRFQILRDLLPHTDQKRDKATFLLEVIEYIRFLQEKAQKYEASF 260
Query: 106 QDWSAEPTKLMPWRNSHWRVQNFATQPHA-------------IKNGSGPGSMFPGKFDDN 152
+W+ E KL+PW N ++R + Q + NGS PG GK DDN
Sbjct: 261 PEWNQENAKLLPWSNIYFRSSWKSAQSKGQIPEDALPDPSQFVTNGSSPGFNITGKLDDN 320
Query: 153 SISMSPTMLTSTQTPVESDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVL 212
+++ + T E+D ++C+ + + N +++ Q P+ D
Sbjct: 321 HTTVASGAVAGTPDLAENDHMASVSCRSAETPINITN---NVTSQYQPQWAGPSGVD--- 374
Query: 213 LHPLQRPVSDAQSNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGID 272
+C + +N Q +LT++ GTI++SS YSQ LLN LT AL+S+GID
Sbjct: 375 --------------DCAVNSSMLNDQ-QLTIDEGTISVSSQYSQELLNTLTHALQSSGID 419
Query: 273 LSQANISVQIDLGKRA-NRGLMPEASVAKDLENPPSINQAMAKLRDVSSGEDSDHSQKR 330
LSQANISVQI+LGKRA R + ++S +K+L +P N+ +A E+ H+ KR
Sbjct: 420 LSQANISVQINLGKRAVKRSVAGQSSSSKELTDPDPSNEMVA-------AEELPHATKR 471
>gi|326515798|dbj|BAK07145.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/304 (40%), Positives = 176/304 (57%), Gaps = 38/304 (12%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
+SKHS TEQRRRSKIN+RFQILR+++PH+DQKRD A+FLLEVIEY+++LQEK QKYE S+
Sbjct: 92 KSKHSATEQRRRSKINDRFQILRDLLPHTDQKRDKATFLLEVIEYIRFLQEKAQKYEASF 151
Query: 106 QDWSAEPTKLMPWRNSHWR-----VQNFATQP--------HAIKNGSGPGSMFPGKFDDN 152
+W+ E KL+PW N ++R Q+ P I+NG+ PG GK DDN
Sbjct: 152 PEWNQENAKLLPWSNMYFRSSWKNAQSKGQIPEDASPDPSQFIRNGASPGFNITGKLDDN 211
Query: 153 SISMSPTMLTSTQTPVESDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVL 212
+++ ++ Q E+D ++C+ D + N ++S Q P+ D
Sbjct: 212 HTAVASAAISGAQDQAETDHMASVSCRSADTPTNILN---NVSPQSQPQWADPSGVD--- 265
Query: 213 LHPLQRPVSDAQSNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGID 272
+C +D +N Q +L ++ GTI++SS YSQ LLN LT AL+S+GID
Sbjct: 266 --------------DCAVNSDVLNNQ-QLMIDEGTISVSSQYSQELLNTLTHALQSSGID 310
Query: 273 LSQANISVQIDLGKRA-NRGLMPEASVAKDLENPPSINQAMAK---LRDVSSGEDSDHSQ 328
LSQANISVQI+LGKRA R ++S K+ + N M + ++ E+ H+
Sbjct: 311 LSQANISVQINLGKRAVKRPTAGQSSSFKEHTDLGPTNDMMGHQQAMLGAAAAEELPHAT 370
Query: 329 KRLR 332
KR +
Sbjct: 371 KRYK 374
>gi|326490559|dbj|BAJ84943.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 605
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 123/304 (40%), Positives = 175/304 (57%), Gaps = 38/304 (12%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
+SKHS TEQRRRSKIN+RFQILR+++PH+DQKRD A+FLLEVIEY+++LQEK QKYE S+
Sbjct: 319 KSKHSATEQRRRSKINDRFQILRDLLPHTDQKRDKATFLLEVIEYIRFLQEKAQKYEASF 378
Query: 106 QDWSAEPTKLMPWRNSHWR-----VQNFATQP--------HAIKNGSGPGSMFPGKFDDN 152
+W+ E KL+PW N ++R Q+ P I+NG+ PG GK DDN
Sbjct: 379 PEWNQENAKLLPWSNMYFRSSWKNAQSKGQIPEDASPDPSQFIRNGASPGFNITGKLDDN 438
Query: 153 SISMSPTMLTSTQTPVESDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVL 212
+++ ++ Q E+D ++C+ D + N S P + P+ D
Sbjct: 439 HTAVASAAISGAQDQAETDHMASVSCRSADTPTNILNNVSPQSQPQWAD---PSGVD--- 492
Query: 213 LHPLQRPVSDAQSNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGID 272
+C +D +N Q +L ++ GTI++SS YSQ LLN LT AL+S+GID
Sbjct: 493 --------------DCAVNSDVLNNQ-QLMIDEGTISVSSQYSQELLNTLTHALQSSGID 537
Query: 273 LSQANISVQIDLGKRA-NRGLMPEASVAKDLENPPSINQAMAK---LRDVSSGEDSDHSQ 328
LSQANISVQI+LGKRA R ++S K+ + N M + ++ E+ H+
Sbjct: 538 LSQANISVQINLGKRAVKRPTAGQSSSFKEHTDLGPTNDMMGHQQAMLGAAAAEELPHAT 597
Query: 329 KRLR 332
KR +
Sbjct: 598 KRYK 601
>gi|357502577|ref|XP_003621577.1| Transcription factor BIM3 [Medicago truncatula]
gi|355496592|gb|AES77795.1| Transcription factor BIM3 [Medicago truncatula]
Length = 347
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/311 (42%), Positives = 181/311 (58%), Gaps = 31/311 (9%)
Query: 41 KASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQK 100
+A+ RSKHS TEQRRRSKINERFQ LR++IP +D KRD ASFLLEVIEY+ +LQEK+Q
Sbjct: 47 RANPHRSKHSETEQRRRSKINERFQALRDLIPENDSKRDKASFLLEVIEYIHFLQEKLQI 106
Query: 101 YEVSYQDWSAEPTKLMPWRNSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTM 160
YE Y+ W+ EPTKL+PWRN H +N AI+NGS G +SP+
Sbjct: 107 YEHPYEGWNQEPTKLIPWRNHHGPSENTTDPSRAIQNGSVDGKNI----------VSPSF 156
Query: 161 LTSTQTPVESDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHP-LQRP 219
+ Q P+ SDP+ I P P + + + ++M ++ ++ P S ++ L+ P
Sbjct: 157 PKNVQNPILSDPSTTI---PKGCTPGSSTEVVPLTMQMRLDMFDPVVSGGMVTQQMLELP 213
Query: 220 VS--DAQSNECP-------------ATTDTMNQQEELTVE--GGTINISSIYSQGLLNNL 262
VS D SN P + +T+ +QEE+ ++ + +ISS YSQ +L L
Sbjct: 214 VSNPDMASNLQPQVWLGKPNKDNHIVSDNTLKEQEEMKIDSGSESDSISSAYSQRILGTL 273
Query: 263 TQALESAGIDLSQANISVQIDLGKRANRGLMPEASVAKDLENPPSINQAMAKLRDVSSGE 322
TQAL+S+G+DLSQ N+SV ID+G+R N G P +K EN NQA+A E
Sbjct: 274 TQALQSSGVDLSQTNVSVDIDVGRRTNTGFTPCQYSSKSNENQFVSNQAIACSGMDYFSE 333
Query: 323 DSDHSQKRLRK 333
DS+ S KR R+
Sbjct: 334 DSEQSSKRFRR 344
>gi|449486887|ref|XP_004157432.1| PREDICTED: transcription factor BIM1-like [Cucumis sativus]
Length = 566
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 136/310 (43%), Positives = 180/310 (58%), Gaps = 23/310 (7%)
Query: 9 EEEDYEDDEFMSKKEAA-SNITNSNAK---DGKNSD-KASVIRSKHSVTEQRRRSKINER 63
EEE +D F+ KKE++ S + K GK+SD KA+ RSKHS TEQRRRSKIN+R
Sbjct: 228 EEELDDDKAFVIKKESSPSTAYKGDLKINICGKSSDQKANTPRSKHSATEQRRRSKINDR 287
Query: 64 FQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS-YQDWSAEPTKLMPWRNSH 122
FQ LRE+IP SDQKRD ASFLLEVIEY+Q+LQEKV+KYE S Q W EP KL+P RN+
Sbjct: 288 FQKLRELIPRSDQKRDKASFLLEVIEYIQFLQEKVRKYESSPPQGWYHEPAKLIPCRNNC 347
Query: 123 WRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACKPMD 182
Q + Q K SGP +F G D+ ++ SP + PVES+ + + D
Sbjct: 348 NPAQCYIDQSQIAK--SGPVFIFAGS-DEKNMCHSPAFPRCSHNPVESEVSTSTTFREAD 404
Query: 183 RQPEVANKGISISMPLQGNLP-----APARSDSVLLHPLQRPVSDAQSNECPATTDTMN- 236
+ P NK + + P A R S + H + Q C + T N
Sbjct: 405 QHPGTNNKTCYPMLDPRHFTPVISEGAKTRLHSQVGHNADNKPCEIQPLSCEMRSCTTNI 464
Query: 237 -------QQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRAN 289
++ E ++GG I+IS YSQGLL LTQAL+S+G+D+SQA+++VQI+LGKR N
Sbjct: 465 VDGNNKLKEPEQRIDGGRISISGAYSQGLLKILTQALQSSGVDMSQASVAVQIELGKRTN 524
Query: 290 -RGLMPEASV 298
R ++P V
Sbjct: 525 YREIVPSPIV 534
>gi|222640773|gb|EEE68905.1| hypothetical protein OsJ_27750 [Oryza sativa Japonica Group]
Length = 467
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 129/300 (43%), Positives = 179/300 (59%), Gaps = 35/300 (11%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
RSKHS TEQRRRSKIN+RFQ+LR+++PH+DQKRD ASFLLEVIEY+++LQEKVQKYEVSY
Sbjct: 182 RSKHSATEQRRRSKINDRFQLLRDLLPHNDQKRDKASFLLEVIEYIRFLQEKVQKYEVSY 241
Query: 106 QDWSAEPTKLMPWRNSHWR-----VQNFATQP--HA------IKNGSGPGSMFPGKFDDN 152
+W+ E K++PW N ++R QN P H+ +KNGS F G D+N
Sbjct: 242 PEWNQENAKVVPWTNIYFRSSWKNAQNKGQVPADHSPDPPELLKNGSPYMFPFTGNSDNN 301
Query: 153 SISMSPTMLTSTQTPVESDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVL 212
+ ++ + Q E+DP ++ + S+ P N+ +D V
Sbjct: 302 N-AVETAAASGAQDQAETDPMSRVSYR-------------SVDTPSPNNV-----ADKVT 342
Query: 213 LHPLQRPVSDAQSNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGID 272
P + V + + D +N +L ++ GTI++SS YSQ LLN L ALE++GID
Sbjct: 343 SQPHAQLVRPSPAENHTVNCDKLNN-SDLAIDEGTISLSSQYSQELLNKLNHALENSGID 401
Query: 273 LSQANISVQIDLGKRANRGLMPEA-SVAKDLENPPSINQAMAK-LRDVSSGEDSDHSQKR 330
LSQA+ISVQI+LGKRA + P A S +K+L +P S +QAM + LR E+ + KR
Sbjct: 402 LSQASISVQINLGKRAMKRSTPAATSTSKELTDPASNSQAMGRQLRLGDGAEEHRQASKR 461
>gi|115477026|ref|NP_001062109.1| Os08g0490000 [Oryza sativa Japonica Group]
gi|42408484|dbj|BAD09664.1| bHLH protein family-like [Oryza sativa Japonica Group]
gi|113624078|dbj|BAF24023.1| Os08g0490000 [Oryza sativa Japonica Group]
gi|215712355|dbj|BAG94482.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201360|gb|EEC83787.1| hypothetical protein OsI_29691 [Oryza sativa Indica Group]
gi|323388945|gb|ADX60277.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 508
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 128/300 (42%), Positives = 177/300 (59%), Gaps = 35/300 (11%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
RSKHS TEQRRRSKIN+RFQ+LR+++PH+DQKRD ASFLLEVIEY+++LQEKVQKYEVSY
Sbjct: 223 RSKHSATEQRRRSKINDRFQLLRDLLPHNDQKRDKASFLLEVIEYIRFLQEKVQKYEVSY 282
Query: 106 QDWSAEPTKLMPWRNSHWR-----VQNFAT--------QPHAIKNGSGPGSMFPGKFDDN 152
+W+ E K++PW N ++R QN P +KNGS F G D+N
Sbjct: 283 PEWNQENAKVVPWTNIYFRSSWKNAQNKGQVPADHSPDPPELLKNGSPYMFPFTGNSDNN 342
Query: 153 SISMSPTMLTSTQTPVESDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVL 212
+ ++ + Q E+DP ++ + S+ P N+ +D V
Sbjct: 343 N-AVETAAASGAQDQAETDPMSRVSYR-------------SVDTPSPNNV-----ADKVT 383
Query: 213 LHPLQRPVSDAQSNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGID 272
P + V + + D +N +L ++ GTI++SS YSQ LLN L ALE++GID
Sbjct: 384 SQPHAQLVRPSPAENHTVNCDKLNN-SDLAIDEGTISLSSQYSQELLNKLNHALENSGID 442
Query: 273 LSQANISVQIDLGKRANRGLMPEA-SVAKDLENPPSINQAMAK-LRDVSSGEDSDHSQKR 330
LSQA+ISVQI+LGKRA + P A S +K+L +P S +QAM + LR E+ + KR
Sbjct: 443 LSQASISVQINLGKRAMKRSTPAATSTSKELTDPASNSQAMGRQLRLGDGAEEHRQASKR 502
>gi|215701004|dbj|BAG92428.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 341
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/256 (43%), Positives = 155/256 (60%), Gaps = 34/256 (13%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
RSKHS TEQRRRSKIN+RFQILRE++PHSDQKRD A+FLLEVIEY+++LQEKVQK+E S
Sbjct: 56 RSKHSATEQRRRSKINDRFQILRELLPHSDQKRDKATFLLEVIEYIRFLQEKVQKFEASV 115
Query: 106 QDWSAEPTKLMPWRNSHWR-----VQNFATQP--------HAIKNGSGPGSMFPGKFDDN 152
+W+ E K++PW N ++R Q+ P I+NGS G F GK DDN
Sbjct: 116 PEWNQENAKILPWSNIYFRSFWKNSQSKGQNPGDDLPDPSQFIRNGSSSGYNFTGKPDDN 175
Query: 153 SISMSPTMLTSTQTPVESDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVL 212
++ + Q VE+D ++ + + + N +++ Q +PA D
Sbjct: 176 HNMVTSAAASGAQELVETDHAASVSYRSAETPTNITN---NVTSQAQAQWASPAGVD--- 229
Query: 213 LHPLQRPVSDAQSNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGID 272
+C ++ +N Q +L ++ GTI++SS YSQ LL LT ALES+G+D
Sbjct: 230 --------------DCAMNSEMLNNQ-QLAIDEGTISLSSQYSQQLLGTLTHALESSGVD 274
Query: 273 LSQANISVQIDLGKRA 288
LSQ++ISVQI+LGKRA
Sbjct: 275 LSQSSISVQINLGKRA 290
>gi|218202323|gb|EEC84750.1| hypothetical protein OsI_31749 [Oryza sativa Indica Group]
Length = 507
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 124/301 (41%), Positives = 174/301 (57%), Gaps = 37/301 (12%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
RSKHS TEQRRRSKIN+RFQILRE++PHSDQKRD A+FLLEVIEY+++LQEKVQK+E S
Sbjct: 222 RSKHSATEQRRRSKINDRFQILRELLPHSDQKRDKATFLLEVIEYIRFLQEKVQKFEASV 281
Query: 106 QDWSAEPTKLMPWRNSHWR-----VQNFATQP--------HAIKNGSGPGSMFPGKFDDN 152
+W+ E K++PW N ++R Q+ P I+NGS G F GK DDN
Sbjct: 282 PEWNQENAKILPWSNIYFRSFWKNSQSKGQNPGDDLPDPSQFIRNGSSSGYNFTGKPDDN 341
Query: 153 SISMSPTMLTSTQTPVESDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVL 212
++ + Q VE+D ++ + + + N +++ Q +PA D
Sbjct: 342 HNMVTSAAASGAQELVETDHAASVSYRSAETPTNITN---NVTSQAQAQWASPAGVD--- 395
Query: 213 LHPLQRPVSDAQSNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGID 272
+C ++ +N Q +L ++ GTI++SS YSQ LL LT ALES+G+D
Sbjct: 396 --------------DCAMNSEMLNNQ-QLAIDEGTISLSSQYSQQLLGTLTHALESSGVD 440
Query: 273 LSQANISVQIDLGKRA-NRGLMPEASVAKDLENPPSINQAMAKLRDVSSG--EDSDHSQK 329
LSQA+ISVQI+LGKRA R +S +K+L + + N+ M + G E+ H K
Sbjct: 441 LSQASISVQINLGKRAVKRPGADGSSSSKELPSTSANNENMGHQLTMLGGGTEELPHPTK 500
Query: 330 R 330
R
Sbjct: 501 R 501
>gi|414589757|tpg|DAA40328.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 342
Score = 197 bits (500), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 122/319 (38%), Positives = 178/319 (55%), Gaps = 52/319 (16%)
Query: 14 EDDEFMSKKEAASNITN---------SNAKDGKNSDKASVIRSKHSVTEQRRRSKINERF 64
++D +++E +S++ + + DG + + RSKHS TEQRRRSKIN+RF
Sbjct: 15 DEDGLTTRREVSSSLQDLAVRVDWKGGSCSDGGTNQGPNTPRSKHSATEQRRRSKINDRF 74
Query: 65 QILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWR 124
QILRE++PH+DQKRD A+FLLEVIEY+++LQEK QKYE ++ +W+ E ++PW N ++R
Sbjct: 75 QILRELLPHNDQKRDKATFLLEVIEYIRFLQEKAQKYEATFPEWNQENPTMLPWSNMYFR 134
Query: 125 -----VQNFATQP--------HAIKNGSGPGSMFPGKFDDN--SISMSPTMLTSTQTPVE 169
Q+ P H ++NGS PGS F GK DDN S + S + + V
Sbjct: 135 SFWKNAQSKGQIPGDSPPDPSHFVRNGSSPGSNFTGKLDDNHTSAAASGALDQAETNHVA 194
Query: 170 SDPNRDIACKPMDRQP-EVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNEC 228
S C P + N IS S P Q P+P +V
Sbjct: 195 S------GCYRSSETPANITNNAISQSQP-QWTGPSPVDDSAV----------------- 230
Query: 229 PATTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRA 288
++ +N Q EL ++ G I++SS YSQ LL +L+ AL+S+G+DLSQ +ISVQI+LGKRA
Sbjct: 231 --KSEMLNSQ-ELAIDEGMISVSSTYSQELLISLSHALQSSGVDLSQTSISVQINLGKRA 287
Query: 289 NRGLMPEASVAKDLENPPS 307
+ V+ + + PP+
Sbjct: 288 GKRSASAGGVSSNSKEPPA 306
>gi|115479731|ref|NP_001063459.1| Os09g0475400 [Oryza sativa Japonica Group]
gi|50726634|dbj|BAD34354.1| bHLH protein family-like [Oryza sativa Japonica Group]
gi|52077332|dbj|BAD46373.1| bHLH protein family-like [Oryza sativa Japonica Group]
gi|113631692|dbj|BAF25373.1| Os09g0475400 [Oryza sativa Japonica Group]
gi|194396123|gb|ACF60479.1| bHLH transcription factor [Oryza sativa Japonica Group]
gi|222641768|gb|EEE69900.1| hypothetical protein OsJ_29738 [Oryza sativa Japonica Group]
Length = 504
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 123/301 (40%), Positives = 174/301 (57%), Gaps = 37/301 (12%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
RSKHS TEQRRRSKIN+RFQILRE++PHSDQKRD A+FLLEVIEY+++LQEKVQK+E S
Sbjct: 219 RSKHSATEQRRRSKINDRFQILRELLPHSDQKRDKATFLLEVIEYIRFLQEKVQKFEASV 278
Query: 106 QDWSAEPTKLMPWRNSHWR-----VQNFATQP--------HAIKNGSGPGSMFPGKFDDN 152
+W+ E K++PW N ++R Q+ P I+NGS G F GK DDN
Sbjct: 279 PEWNQENAKILPWSNIYFRSFWKNSQSKGQNPGDDLPDPSQFIRNGSSSGYNFTGKPDDN 338
Query: 153 SISMSPTMLTSTQTPVESDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVL 212
++ + Q VE+D ++ + + + N +++ Q +PA D
Sbjct: 339 HNMVTSAAASGAQELVETDHAASVSYRSAETPTNITN---NVTSQAQAQWASPAGVD--- 392
Query: 213 LHPLQRPVSDAQSNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGID 272
+C ++ +N Q +L ++ GTI++SS YSQ LL LT ALES+G+D
Sbjct: 393 --------------DCAMNSEMLNNQ-QLAIDEGTISLSSQYSQQLLGTLTHALESSGVD 437
Query: 273 LSQANISVQIDLGKRA-NRGLMPEASVAKDLENPPSINQAMAKLRDVSSG--EDSDHSQK 329
LSQ++ISVQI+LGKRA R +S +K+L + + N+ M + G E+ H K
Sbjct: 438 LSQSSISVQINLGKRAVKRPGADGSSSSKELPSTSANNENMGHQLTMLGGGTEELPHPTK 497
Query: 330 R 330
R
Sbjct: 498 R 498
>gi|414589758|tpg|DAA40329.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 343
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/320 (38%), Positives = 177/320 (55%), Gaps = 53/320 (16%)
Query: 14 EDDEFMSKKEAASNI----------TNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINER 63
++D +++E +S++ + DG + + RSKHS TEQRRRSKIN+R
Sbjct: 15 DEDGLTTRREVSSSLQADLAVRVDWKGGSCSDGGTNQGPNTPRSKHSATEQRRRSKINDR 74
Query: 64 FQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHW 123
FQILRE++PH+DQKRD A+FLLEVIEY+++LQEK QKYE ++ +W+ E ++PW N ++
Sbjct: 75 FQILRELLPHNDQKRDKATFLLEVIEYIRFLQEKAQKYEATFPEWNQENPTMLPWSNMYF 134
Query: 124 R-----VQNFATQP--------HAIKNGSGPGSMFPGKFDDN--SISMSPTMLTSTQTPV 168
R Q+ P H ++NGS PGS F GK DDN S + S + + V
Sbjct: 135 RSFWKNAQSKGQIPGDSPPDPSHFVRNGSSPGSNFTGKLDDNHTSAAASGALDQAETNHV 194
Query: 169 ESDPNRDIACKPMDRQP-EVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNE 227
S C P + N IS S P Q P+P +V
Sbjct: 195 AS------GCYRSSETPANITNNAISQSQP-QWTGPSPVDDSAV---------------- 231
Query: 228 CPATTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKR 287
++ +N Q EL ++ G I++SS YSQ LL +L+ AL+S+G+DLSQ +ISVQI+LGKR
Sbjct: 232 ---KSEMLNSQ-ELAIDEGMISVSSTYSQELLISLSHALQSSGVDLSQTSISVQINLGKR 287
Query: 288 ANRGLMPEASVAKDLENPPS 307
A + V+ + + PP+
Sbjct: 288 AGKRSASAGGVSSNSKEPPA 307
>gi|226503567|ref|NP_001141735.1| uncharacterized protein LOC100273866 [Zea mays]
gi|194705740|gb|ACF86954.1| unknown [Zea mays]
gi|414589756|tpg|DAA40327.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 329
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/306 (38%), Positives = 172/306 (56%), Gaps = 39/306 (12%)
Query: 14 EDDEFMSKKEAASNITN---------SNAKDGKNSDKASVIRSKHSVTEQRRRSKINERF 64
++D +++E +S++ + + DG + + RSKHS TEQRRRSKIN+RF
Sbjct: 15 DEDGLTTRREVSSSLQDLAVRVDWKGGSCSDGGTNQGPNTPRSKHSATEQRRRSKINDRF 74
Query: 65 QILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWR 124
QILRE++PH+DQKRD A+FLLEVIEY+++LQEK QKYE ++ +W+ E ++PW
Sbjct: 75 QILRELLPHNDQKRDKATFLLEVIEYIRFLQEKAQKYEATFPEWNQENPTMLPWSKGQIP 134
Query: 125 VQNFATQPHAIKNGSGPGSMFPGKFDDN--SISMSPTMLTSTQTPVESDPNRDIACKPMD 182
+ H ++NGS PGS F GK DDN S + S + + V S C
Sbjct: 135 GDSPPDPSHFVRNGSSPGSNFTGKLDDNHTSAAASGALDQAETNHVAS------GCYRSS 188
Query: 183 RQP-EVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPATTDTMNQQEEL 241
P + N IS S P Q P+P +V ++ +N Q EL
Sbjct: 189 ETPANITNNAISQSQP-QWTGPSPVDDSAV-------------------KSEMLNSQ-EL 227
Query: 242 TVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRANRGLMPEASVAKD 301
++ G I++SS YSQ LL +L+ AL+S+G+DLSQ +ISVQI+LGKRA + V+ +
Sbjct: 228 AIDEGMISVSSTYSQELLISLSHALQSSGVDLSQTSISVQINLGKRAGKRSASAGGVSSN 287
Query: 302 LENPPS 307
+ PP+
Sbjct: 288 SKEPPA 293
>gi|414589760|tpg|DAA40331.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 506
Score = 194 bits (492), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 118/306 (38%), Positives = 172/306 (56%), Gaps = 39/306 (12%)
Query: 14 EDDEFMSKKEAASNITN---------SNAKDGKNSDKASVIRSKHSVTEQRRRSKINERF 64
++D +++E +S++ + + DG + + RSKHS TEQRRRSKIN+RF
Sbjct: 192 DEDGLTTRREVSSSLQDLAVRVDWKGGSCSDGGTNQGPNTPRSKHSATEQRRRSKINDRF 251
Query: 65 QILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWR 124
QILRE++PH+DQKRD A+FLLEVIEY+++LQEK QKYE ++ +W+ E ++PW
Sbjct: 252 QILRELLPHNDQKRDKATFLLEVIEYIRFLQEKAQKYEATFPEWNQENPTMLPWSKGQIP 311
Query: 125 VQNFATQPHAIKNGSGPGSMFPGKFDDN--SISMSPTMLTSTQTPVESDPNRDIACKPMD 182
+ H ++NGS PGS F GK DDN S + S + + V S C
Sbjct: 312 GDSPPDPSHFVRNGSSPGSNFTGKLDDNHTSAAASGALDQAETNHVAS------GCYRSS 365
Query: 183 RQP-EVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPATTDTMNQQEEL 241
P + N IS S P Q P+P +V ++ +N Q EL
Sbjct: 366 ETPANITNNAISQSQP-QWTGPSPVDDSAV-------------------KSEMLNSQ-EL 404
Query: 242 TVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRANRGLMPEASVAKD 301
++ G I++SS YSQ LL +L+ AL+S+G+DLSQ +ISVQI+LGKRA + V+ +
Sbjct: 405 AIDEGMISVSSTYSQELLISLSHALQSSGVDLSQTSISVQINLGKRAGKRSASAGGVSSN 464
Query: 302 LENPPS 307
+ PP+
Sbjct: 465 SKEPPA 470
>gi|224120724|ref|XP_002330936.1| predicted protein [Populus trichocarpa]
gi|222873130|gb|EEF10261.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 193 bits (491), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 110/261 (42%), Positives = 155/261 (59%), Gaps = 26/261 (9%)
Query: 29 TNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVI 88
T + A N KA+ RS+HS TEQRRRSKINERFQ LR ++P +DQKRD ASFLLEVI
Sbjct: 11 TKAKADSKSNELKANANRSRHSETEQRRRSKINERFQALRNLVPQNDQKRDKASFLLEVI 70
Query: 89 EYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFATQPHAIKNGSGPGSMFPGK 148
EYVQ+LQ+K+Q YE SY+ WS EP KL+P +N ++ +KNGS
Sbjct: 71 EYVQFLQDKLQIYEGSYEGWSQEPAKLLPRKNYRASAESILGHTQVMKNGSA-------- 122
Query: 149 FDDNSISMSPTMLTSTQTPVESDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARS 208
+N++ ML + ++SD + K +D P N I + Q +R
Sbjct: 123 -HENTV-----MLGNVHNSIKSDMDTAAMYKTLDHSPGPTNPAIPFEVQTQ------SRL 170
Query: 209 DSVLLHPLQRPVSDAQSNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALES 268
S LLH + + EC +T+N QE++ + ++NIS+ YS+ +LN+LTQAL S
Sbjct: 171 QSQLLH------GQSCATECITPNNTLNGQEDVASDSQSVNISNTYSKQILNSLTQALLS 224
Query: 269 AGIDLSQANISVQIDLGKRAN 289
+G+D++Q +I+VQID+GKR N
Sbjct: 225 SGVDIAQTSITVQIDVGKREN 245
>gi|388520503|gb|AFK48313.1| unknown [Lotus japonicus]
Length = 171
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/167 (58%), Positives = 126/167 (75%), Gaps = 1/167 (0%)
Query: 168 VESDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNE 227
++ D +RDI K +RQP++ +KGI + + + N+ P RSD V HPLQ +SDAQS E
Sbjct: 2 IDPDQSRDILSKTAERQPDLVSKGIPLPLAMHANMSVPVRSDGVPAHPLQGTLSDAQSTE 61
Query: 228 CPATTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKR 287
CPAT++ NQQ+ELTVEGGTI+ISS+YSQGLLNNLTQAL+SAG+DLSQA+ISVQI+LG R
Sbjct: 62 CPATSEPQNQQDELTVEGGTISISSVYSQGLLNNLTQALQSAGLDLSQASISVQINLGNR 121
Query: 288 ANRGLMPEASVAKDLENPPSINQAMAKLRDVSSGEDSDH-SQKRLRK 333
AN G S K+ +NP +QA+A RD SGEDSDH ++KR+RK
Sbjct: 122 ANIGPSGGTSSTKNHDNPLCSSQAIAHFRDAGSGEDSDHQAKKRMRK 168
>gi|194706602|gb|ACF87385.1| unknown [Zea mays]
gi|414589755|tpg|DAA40326.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 317
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 167/304 (54%), Gaps = 47/304 (15%)
Query: 14 EDDEFMSKKEAASNITN---------SNAKDGKNSDKASVIRSKHSVTEQRRRSKINERF 64
++D +++E +S++ + + DG + + RSKHS TEQRRRSKIN+RF
Sbjct: 15 DEDGLTTRREVSSSLQDLAVRVDWKGGSCSDGGTNQGPNTPRSKHSATEQRRRSKINDRF 74
Query: 65 QILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWR 124
QILRE++PH+DQKRD A+FLLEVIEY+++LQEK QKYE ++ +W+ E ++PW
Sbjct: 75 QILRELLPHNDQKRDKATFLLEVIEYIRFLQEKAQKYEATFPEWNQENPTMLPWSKGQIP 134
Query: 125 VQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACKPMDR- 183
+ H ++NGS PGS F GK DDN S + A +D+
Sbjct: 135 GDSPPDPSHFVRNGSSPGSNFTGKLDDNHTSAA-------------------ASGALDQA 175
Query: 184 QPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPATTDTMNQQEELTV 243
+ G S N+ +P+ PV D+ A M +EL +
Sbjct: 176 ETNHVASGCYRSSETPANITSPS------------PVDDS------AVKSEMLNSQELAI 217
Query: 244 EGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRANRGLMPEASVAKDLE 303
+ G I++SS YSQ LL +L+ AL+S+G+DLSQ +ISVQI+LGKRA + V+ + +
Sbjct: 218 DEGMISVSSTYSQELLISLSHALQSSGVDLSQTSISVQINLGKRAGKRSASAGGVSSNSK 277
Query: 304 NPPS 307
PP+
Sbjct: 278 EPPA 281
>gi|124361074|gb|ABN09046.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 366
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/330 (40%), Positives = 181/330 (54%), Gaps = 50/330 (15%)
Query: 41 KASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQK 100
+A+ RSKHS TEQRRRSKINERFQ LR++IP +D KRD ASFLLEVIEY+ +LQEK+Q
Sbjct: 47 RANPHRSKHSETEQRRRSKINERFQALRDLIPENDSKRDKASFLLEVIEYIHFLQEKLQI 106
Query: 101 YEVSYQDWSAEPTKLMPWRNSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTM 160
YE Y+ W+ EPTKL+PWRN H +N AI+NGS G +SP+
Sbjct: 107 YEHPYEGWNQEPTKLIPWRNHHGPSENTTDPSRAIQNGSVDGKNI----------VSPSF 156
Query: 161 LTSTQTPVESDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHP-LQRP 219
+ Q P+ SDP+ I P P + + + ++M ++ ++ P S ++ L+ P
Sbjct: 157 PKNVQNPILSDPSTTI---PKGCTPGSSTEVVPLTMQMRLDMFDPVVSGGMVTQQMLELP 213
Query: 220 VS--DAQSNECP-------------ATTDTMNQQEELTVE--GGTINISSIYSQGL---- 258
VS D SN P + +T+ +QEE+ ++ + +ISS YSQ L
Sbjct: 214 VSNPDMASNLQPQVWLGKPNKDNHIVSDNTLKEQEEMKIDSGSESDSISSAYSQRLSIAD 273
Query: 259 ---------------LNNLTQALESAGIDLSQANISVQIDLGKRANRGLMPEASVAKDLE 303
L LTQAL+S+G+DLSQ N+SV ID+G+R N G P +K E
Sbjct: 274 SRSSNVVHCDMFTRILGTLTQALQSSGVDLSQTNVSVDIDVGRRTNTGFTPCQYSSKSNE 333
Query: 304 NPPSINQAMAKLRDVSSGEDSDHSQKRLRK 333
N NQA+A EDS+ S KR R+
Sbjct: 334 NQFVSNQAIACSGMDYFSEDSEQSSKRFRR 363
>gi|414589759|tpg|DAA40330.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 494
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 167/304 (54%), Gaps = 47/304 (15%)
Query: 14 EDDEFMSKKEAASNITN---------SNAKDGKNSDKASVIRSKHSVTEQRRRSKINERF 64
++D +++E +S++ + + DG + + RSKHS TEQRRRSKIN+RF
Sbjct: 192 DEDGLTTRREVSSSLQDLAVRVDWKGGSCSDGGTNQGPNTPRSKHSATEQRRRSKINDRF 251
Query: 65 QILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWR 124
QILRE++PH+DQKRD A+FLLEVIEY+++LQEK QKYE ++ +W+ E ++PW
Sbjct: 252 QILRELLPHNDQKRDKATFLLEVIEYIRFLQEKAQKYEATFPEWNQENPTMLPWSKGQIP 311
Query: 125 VQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACKPMDR- 183
+ H ++NGS PGS F GK DDN S + A +D+
Sbjct: 312 GDSPPDPSHFVRNGSSPGSNFTGKLDDNHTSAA-------------------ASGALDQA 352
Query: 184 QPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPATTDTMNQQEELTV 243
+ G S N+ +P+ PV D+ A M +EL +
Sbjct: 353 ETNHVASGCYRSSETPANITSPS------------PVDDS------AVKSEMLNSQELAI 394
Query: 244 EGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRANRGLMPEASVAKDLE 303
+ G I++SS YSQ LL +L+ AL+S+G+DLSQ +ISVQI+LGKRA + V+ + +
Sbjct: 395 DEGMISVSSTYSQELLISLSHALQSSGVDLSQTSISVQINLGKRAGKRSASAGGVSSNSK 454
Query: 304 NPPS 307
PP+
Sbjct: 455 EPPA 458
>gi|357148233|ref|XP_003574682.1| PREDICTED: transcription factor BIM1-like [Brachypodium distachyon]
Length = 489
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 127/300 (42%), Positives = 169/300 (56%), Gaps = 42/300 (14%)
Query: 14 EDDEFMSKKEAASNI----TNSNAKDGKNSDKASV------IRSKHSVTEQRRRSKINER 63
++D +++E +S++ AK G S A RSKHS TEQRRRSKIN+R
Sbjct: 161 DEDGLAARREVSSSLKELTVRVEAKGGSCSGSAGTDQLPNTPRSKHSATEQRRRSKINDR 220
Query: 64 FQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHW 123
FQ+LREI+PH+DQKRD ASFLLEVIEY+++LQEKVQKYEVSY + + E K++PW N ++
Sbjct: 221 FQLLREILPHNDQKRDKASFLLEVIEYIRFLQEKVQKYEVSYPEGNQENGKIVPWANMYF 280
Query: 124 R-----VQNFATQP--------HAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVES 170
R QN P IKNGS P F K DDN ++ E+
Sbjct: 281 RSFWKNYQNKDQIPGDVSPDPSQIIKNGSSPDFPFIVKPDDNDNGVASVGPLGALDQAET 340
Query: 171 DPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPA 230
D P+ R +++K S P NLP D V P P + ++ A
Sbjct: 341 D--------PLGR---MSHKSTETSSP--DNLP-----DIVATLPQAHPTRSSPADGS-A 381
Query: 231 TTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRANR 290
+ EL ++ GTI++SS YSQ LL+ L AL+S+GIDLSQA+ISVQI+LGKRA +
Sbjct: 382 MIKELLHNPELAIDEGTISLSSQYSQELLSTLNHALQSSGIDLSQASISVQINLGKRATK 441
>gi|242082409|ref|XP_002445973.1| hypothetical protein SORBIDRAFT_07g028860 [Sorghum bicolor]
gi|241942323|gb|EES15468.1| hypothetical protein SORBIDRAFT_07g028860 [Sorghum bicolor]
Length = 495
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 160/294 (54%), Gaps = 44/294 (14%)
Query: 18 FMSKKEAASNITNSN--AKDGKNSDKASV------IRSKHSVTEQRRRSKINERFQILRE 69
+++E +S++ + AK G S A RSKHS TEQRRRSKIN+RFQILRE
Sbjct: 172 LAARREVSSSLKDHRVEAKGGSCSGSAGTDQLPNTPRSKHSATEQRRRSKINDRFQILRE 231
Query: 70 IIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQ--- 126
I+P +DQKRD ASFLLEVIEY+++LQEKV+K+E S +W+ E K+MPW N ++R
Sbjct: 232 ILPQNDQKRDKASFLLEVIEYIRFLQEKVEKHEASQPEWNQENAKIMPWSNIYFRSSWKN 291
Query: 127 -------NFATQPHA---IKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDI 176
N T A IKNGS P F K D + + + + VE +P
Sbjct: 292 SQNKDEVNGDTTTDASLVIKNGSSPRFPFAAKPGDLNNAAAFETASGAHERVELEPK--- 348
Query: 177 ACKPM--DRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPATTDT 234
C P D P ++ + L P+ SD + A +
Sbjct: 349 GCVPRKEDETPNNVTNNVATQQAAETQLTNPSPSDDL------------------AGNNG 390
Query: 235 MNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRA 288
M EL ++ GTI++SS YS+GLL L AL+++G+DLSQA+ISVQI+LGKRA
Sbjct: 391 MLNNPELAIDEGTISLSSQYSEGLLTTLNLALQNSGVDLSQASISVQINLGKRA 444
>gi|449439669|ref|XP_004137608.1| PREDICTED: transcription factor BIM1-like [Cucumis sativus]
Length = 563
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 129/310 (41%), Positives = 170/310 (54%), Gaps = 26/310 (8%)
Query: 9 EEEDYEDDEFMSKKEAA-SNITNSNAK---DGKNSD-KASVIRSKHSVTEQRRRSKINER 63
EEE +D F+ KKE++ S + K GK+SD KA+ RSKHS TEQRRRSKIN+R
Sbjct: 228 EEELDDDKAFVIKKESSPSTAYKGDLKINICGKSSDQKANTPRSKHSATEQRRRSKINDR 287
Query: 64 FQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS-YQDWSAEPTKLMPWRNSH 122
FQ LRE+IP SDQKRD ASFLLEVIEY+Q+LQEKV+KYE S Q W EP KL+P RN+
Sbjct: 288 FQKLRELIPRSDQKRDKASFLLEVIEYIQFLQEKVRKYESSPPQGWYHEPAKLIPCRNNC 347
Query: 123 WRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACKPMD 182
Q + Q K SGP +F G D+ ++ SP + PVES+ + + D
Sbjct: 348 NPAQCYIDQSQIAK--SGPVFIFAGS-DEKNMCHSPAFPRCSHNPVESEVSTSTTFREAD 404
Query: 183 RQPEVANKGISISMPLQGNLP-----APARSDSVLLHPLQRPVSDAQSNECPATTDTMN- 236
+ P NK + + P A R S + H + Q C + T N
Sbjct: 405 QHPGTNNKTCYPMLDPRHFTPVISEGAKTRLHSQVGHNADNKPCEIQPLSCEMRSCTTNI 464
Query: 237 -------QQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRAN 289
++ E ++GG I+IS YSQG NL AL I + A+++VQI+LGKR N
Sbjct: 465 VDGNNKLKEPEQRIDGGRISISGAYSQGQTINL--ALFKIDI-IVLASVAVQIELGKRTN 521
Query: 290 -RGLMPEASV 298
R ++P V
Sbjct: 522 YREIVPSPIV 531
>gi|42568187|ref|NP_198702.2| transcription factor BIM3 [Arabidopsis thaliana]
gi|61211679|sp|Q9FMB6.1|BIM3_ARATH RecName: Full=Transcription factor BIM3; AltName:
Full=BES1-interacting Myc-like protein 3; AltName:
Full=Basic helix-loop-helix protein 141;
Short=AtbHLH141; Short=bHLH 141; AltName:
Full=Transcription factor EN 127; AltName: Full=bHLH
transcription factor bHLH141
gi|9758063|dbj|BAB08642.1| DNA-binding protein-like [Arabidopsis thaliana]
gi|45935053|gb|AAS79561.1| basic helix-loop-helix family protein [Arabidopsis thaliana]
gi|46367492|emb|CAG25872.1| hypothetical protein [Arabidopsis thaliana]
gi|193885157|gb|ACF28392.1| At5g38860 [Arabidopsis thaliana]
gi|332006984|gb|AED94367.1| transcription factor BIM3 [Arabidopsis thaliana]
Length = 298
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 155/291 (53%), Gaps = 28/291 (9%)
Query: 45 IRSKHSVTEQRRRSKINERFQILREIIPHS--DQKRDTASFLLEVIEYVQYLQEKVQKYE 102
RSKHS TEQRRRSKINERFQ L +IIP + DQKRD ASFLLEVIEY+ +LQEKV YE
Sbjct: 34 CRSKHSETEQRRRSKINERFQSLMDIIPQNQNDQKRDKASFLLEVIEYIHFLQEKVHMYE 93
Query: 103 VSYQDWSAEPTKLMPWRNSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLT 162
S+Q W PTKL+PWRNSH V P +K+ S ++ ++ S L
Sbjct: 94 DSHQMWYQSPTKLIPWRNSHGSVAEENDHPQIVKSFSS----------NDKVAASSGFLL 143
Query: 163 STQTPVESDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSD 222
T V D + ++ K + P A + P S + H +P +
Sbjct: 144 DTYNSVNPDIDSAVSTKIPEHSPVSAVSSYLRTEP----------SLQFVQHDFWQPKTS 193
Query: 223 AQSNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQI 282
+ C T + + E+ + ++S++ SQ +LN LT+AL+S+G+++S+ ISVQ+
Sbjct: 194 CGTINC-FTNELLTSDEKTSA-----SLSTVCSQRVLNTLTEALKSSGVNMSETMISVQL 247
Query: 283 DLGKRANRGLMPEASVAKDLENPPSINQAMAKLRDVSSGEDSDHSQKRLRK 333
L KR +R A ++D N + + + S D DHSQKR+R+
Sbjct: 248 SLRKREDREYSVAAFASEDNGNSIADEEGDSPTETRSFCNDIDHSQKRIRR 298
>gi|334187514|ref|NP_001190259.1| transcription factor BIM1 [Arabidopsis thaliana]
gi|332003872|gb|AED91255.1| transcription factor BIM1 [Arabidopsis thaliana]
Length = 532
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 170/299 (56%), Gaps = 38/299 (12%)
Query: 1 MRTTKGNREEEDYEDDE-FMSKKEAASNI--------TNSNAKDGKNSDKASVIRSKHSV 51
+R+ KG+ +E+D +D+E F+ KKE++S ++ + N K + RSKHS
Sbjct: 228 IRSAKGSSQEDDLDDEEDFIMKKESSSTSQSHRVDLRVKADVRGSPNDQKLNTPRSKHSA 287
Query: 52 TEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAE 111
TEQRRRSKIN+RFQ+LR++IP+SDQKRD ASFLLEVIEY+Q+LQEK KY SYQ W+ E
Sbjct: 288 TEQRRRSKINDRFQMLRQLIPNSDQKRDKASFLLEVIEYIQFLQEKADKYVTSYQGWNHE 347
Query: 112 PTKLMPWRNSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESD 171
P KL+ W N++ Q + G F K ++ ++ ++L + Q V
Sbjct: 348 PAKLLNWSNNN---QQLVPE----------GVAFAPKLEEEKNNIPVSVLATAQGVVIDH 394
Query: 172 PNRDIACK-PMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPA 230
P P+ Q S P+ P P V+ +++ E
Sbjct: 395 PTTATTSPFPLSIQSN------SFFSPVIAGNPVPQ---------FHARVASSEAVEPSP 439
Query: 231 TTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRAN 289
++ + ++E+ V G I ISS+YSQGL+ L +ALE++G+DL++A+ISV+I+L K+++
Sbjct: 440 SSRSQKEEEDEEVLEGNIRISSVYSQGLVKTLREALENSGVDLTKASISVEIELAKQSS 498
>gi|238481217|ref|NP_001154698.1| transcription factor BIM1 [Arabidopsis thaliana]
gi|332003869|gb|AED91252.1| transcription factor BIM1 [Arabidopsis thaliana]
Length = 408
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 104/280 (37%), Positives = 155/280 (55%), Gaps = 37/280 (13%)
Query: 18 FMSKKEAASNI--------TNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILRE 69
F+ KKE++S ++ + N K + RSKHS TEQRRRSKIN+RFQ+LR+
Sbjct: 122 FIMKKESSSTSQSHRVDLRVKADVRGSPNDQKLNTPRSKHSATEQRRRSKINDRFQMLRQ 181
Query: 70 IIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFA 129
+IP+SDQKRD ASFLLEVIEY+Q+LQEK KY SYQ W+ EP KL+ W N++ Q
Sbjct: 182 LIPNSDQKRDKASFLLEVIEYIQFLQEKADKYVTSYQGWNHEPAKLLNWSNNN---QQLV 238
Query: 130 TQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACK-PMDRQPEVA 188
+ G F K ++ ++ ++L + Q V P P+ Q
Sbjct: 239 PE----------GVAFAPKLEEEKNNIPVSVLATAQGVVIDHPTTATTSPFPLSIQSN-- 286
Query: 189 NKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPATTDTMNQQEELTVEGGTI 248
S P+ P P V+ +++ E ++ + ++E+ V G I
Sbjct: 287 ----SFFSPVIAGNPVPQ---------FHARVASSEAVEPSPSSRSQKEEEDEEVLEGNI 333
Query: 249 NISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRA 288
ISS+YSQGL+ L +ALE++G+DL++A+ISV+I+L K++
Sbjct: 334 RISSVYSQGLVKTLREALENSGVDLTKASISVEIELAKQS 373
>gi|297810917|ref|XP_002873342.1| hypothetical protein ARALYDRAFT_908762 [Arabidopsis lyrata subsp.
lyrata]
gi|297319179|gb|EFH49601.1| hypothetical protein ARALYDRAFT_908762 [Arabidopsis lyrata subsp.
lyrata]
Length = 540
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/299 (37%), Positives = 167/299 (55%), Gaps = 31/299 (10%)
Query: 1 MRTTKGNREEEDYEDDE-FMSKKEAASNI--------TNSNAKDGKNSDKASVIRSKHSV 51
+R+ KG+ +E+D +D+E F+ KKE++S ++ + N K + RSKHS
Sbjct: 230 IRSAKGSSQEDDLDDEEDFIMKKESSSTSQSHRVDLRVKADVRGSANDQKLNTPRSKHSA 289
Query: 52 TEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAE 111
TEQRRRSKIN+RFQ+LR++IP+SDQKRD ASFLLEVIEY+Q+LQEK KYE SYQ W+ E
Sbjct: 290 TEQRRRSKINDRFQMLRQLIPNSDQKRDKASFLLEVIEYIQFLQEKADKYETSYQGWNHE 349
Query: 112 PTKLMPWRNSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESD 171
P KL+ W++++ Q + G F K + ++ ++L + Q V
Sbjct: 350 PAKLLNWQSNN---QQLVPE----------GVAFAPKMEVEKNNIPVSVLATAQGVVIDH 396
Query: 172 PNRDIACK-PMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPA 230
P P+ Q S P+ P P V P ++S P
Sbjct: 397 PTTATTSPFPLSIQSN------SFFSPVIAGNPVPQFHTRVASSETVEPSPSSRSQTQPL 450
Query: 231 TTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRAN 289
+ + EE G I ISS+YSQGL+ L +ALE++G+DL++A+ISV+I+L K+++
Sbjct: 451 KEEEEVEDEEDLE--GNIRISSVYSQGLVKTLREALENSGVDLTKASISVEIELAKQSS 507
>gi|30682248|ref|NP_196430.2| transcription factor BIM1 [Arabidopsis thaliana]
gi|119935975|gb|ABM06050.1| At5g08130 [Arabidopsis thaliana]
gi|225898899|dbj|BAH30580.1| hypothetical protein [Arabidopsis thaliana]
gi|332003867|gb|AED91250.1| transcription factor BIM1 [Arabidopsis thaliana]
Length = 409
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/280 (37%), Positives = 156/280 (55%), Gaps = 36/280 (12%)
Query: 18 FMSKKEAASNI--------TNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILRE 69
F+ KKE++S ++ + N K + RSKHS TEQRRRSKIN+RFQ+LR+
Sbjct: 122 FIMKKESSSTSQSHRVDLRVKADVRGSPNDQKLNTPRSKHSATEQRRRSKINDRFQMLRQ 181
Query: 70 IIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFA 129
+IP+SDQKRD ASFLLEVIEY+Q+LQEK KY SYQ W+ EP KL+ W++++ N
Sbjct: 182 LIPNSDQKRDKASFLLEVIEYIQFLQEKADKYVTSYQGWNHEPAKLLNWQSNN----NQQ 237
Query: 130 TQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACK-PMDRQPEVA 188
P G F K ++ ++ ++L + Q V P P+ Q
Sbjct: 238 LVPE--------GVAFAPKLEEEKNNIPVSVLATAQGVVIDHPTTATTSPFPLSIQSN-- 287
Query: 189 NKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPATTDTMNQQEELTVEGGTI 248
S P+ P P V+ +++ E ++ + ++E+ V G I
Sbjct: 288 ----SFFSPVIAGNPVPQ---------FHARVASSEAVEPSPSSRSQKEEEDEEVLEGNI 334
Query: 249 NISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRA 288
ISS+YSQGL+ L +ALE++G+DL++A+ISV+I+L K++
Sbjct: 335 RISSVYSQGLVKTLREALENSGVDLTKASISVEIELAKQS 374
>gi|186521214|ref|NP_001119190.1| transcription factor BIM1 [Arabidopsis thaliana]
gi|334187510|ref|NP_001190257.1| transcription factor BIM1 [Arabidopsis thaliana]
gi|209572593|sp|Q9LEZ3.2|BIM1_ARATH RecName: Full=Transcription factor BIM1; AltName:
Full=BES1-interacting Myc-like protein 1; AltName:
Full=Basic helix-loop-helix protein 46; Short=AtbHLH46;
Short=bHLH 46; AltName: Full=Transcription factor EN
126; AltName: Full=bHLH transcription factor bHLH046
gi|332003868|gb|AED91251.1| transcription factor BIM1 [Arabidopsis thaliana]
gi|332003870|gb|AED91253.1| transcription factor BIM1 [Arabidopsis thaliana]
Length = 529
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 171/299 (57%), Gaps = 37/299 (12%)
Query: 1 MRTTKGNREEEDYEDDE-FMSKKEAASNI--------TNSNAKDGKNSDKASVIRSKHSV 51
+R+ KG+ +E+D +D+E F+ KKE++S ++ + N K + RSKHS
Sbjct: 224 IRSAKGSSQEDDLDDEEDFIMKKESSSTSQSHRVDLRVKADVRGSPNDQKLNTPRSKHSA 283
Query: 52 TEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAE 111
TEQRRRSKIN+RFQ+LR++IP+SDQKRD ASFLLEVIEY+Q+LQEK KY SYQ W+ E
Sbjct: 284 TEQRRRSKINDRFQMLRQLIPNSDQKRDKASFLLEVIEYIQFLQEKADKYVTSYQGWNHE 343
Query: 112 PTKLMPWRNSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESD 171
P KL+ W++++ N P G F K ++ ++ ++L + Q V
Sbjct: 344 PAKLLNWQSNN----NQQLVPE--------GVAFAPKLEEEKNNIPVSVLATAQGVVIDH 391
Query: 172 PNRDIACK-PMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPA 230
P P+ Q S P+ P P V+ +++ E
Sbjct: 392 PTTATTSPFPLSIQSN------SFFSPVIAGNPVPQ---------FHARVASSEAVEPSP 436
Query: 231 TTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRAN 289
++ + ++E+ V G I ISS+YSQGL+ L +ALE++G+DL++A+ISV+I+L K+++
Sbjct: 437 SSRSQKEEEDEEVLEGNIRISSVYSQGLVKTLREALENSGVDLTKASISVEIELAKQSS 495
>gi|334187512|ref|NP_001190258.1| transcription factor BIM1 [Arabidopsis thaliana]
gi|332003871|gb|AED91254.1| transcription factor BIM1 [Arabidopsis thaliana]
Length = 529
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 171/299 (57%), Gaps = 37/299 (12%)
Query: 1 MRTTKGNREEEDYEDDE-FMSKKEAASNI--------TNSNAKDGKNSDKASVIRSKHSV 51
+R+ KG+ +E+D +D+E F+ KKE++S ++ + N K + RSKHS
Sbjct: 224 IRSAKGSSQEDDLDDEEDFIMKKESSSTSQSHRVDLRVKADVRGSPNDQKLNTPRSKHSA 283
Query: 52 TEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAE 111
TEQRRRSKIN+RFQ+LR++IP+SDQKRD ASFLLEVIEY+Q+LQEK KY SYQ W+ E
Sbjct: 284 TEQRRRSKINDRFQMLRQLIPNSDQKRDKASFLLEVIEYIQFLQEKADKYVTSYQGWNHE 343
Query: 112 PTKLMPWRNSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESD 171
P KL+ W++++ N P G F K ++ ++ ++L + Q V
Sbjct: 344 PAKLLNWQSNN----NQQLVPE--------GVAFAPKLEEEKNNIPVSVLATAQGVVIDH 391
Query: 172 PNRDIACK-PMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPA 230
P P+ Q S P+ P P V+ +++ E
Sbjct: 392 PTTATTSPFPLSIQSN------SFFSPVIAGNPVPQ---------FHARVASSEAVEPSP 436
Query: 231 TTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRAN 289
++ + ++E+ V G I ISS+YSQGL+ L +ALE++G+DL++A+ISV+I+L K+++
Sbjct: 437 SSRSQKEEEDEEVLEGNIRISSVYSQGLVKTLREALENSGVDLTKASISVEIELAKQSS 495
>gi|224119248|ref|XP_002331264.1| predicted protein [Populus trichocarpa]
gi|222873689|gb|EEF10820.1| predicted protein [Populus trichocarpa]
Length = 256
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 122/232 (52%), Gaps = 30/232 (12%)
Query: 41 KASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQK 100
KA+ RSKHS TEQRRRSKINERFQ LR +IP +DQKRD ASFLLEVIEY+Q+LQEK+Q
Sbjct: 38 KANANRSKHSETEQRRRSKINERFQALRNLIPQNDQKRDKASFLLEVIEYIQFLQEKLQV 97
Query: 101 YEVSYQDWSAEPTKLMPWRNSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTM 160
YE SY+ WS EP KL+PW+ ++ +KNGS +NS+ M
Sbjct: 98 YEGSYEGWSQEPAKLLPWKIDRASAESLLDHTQVMKNGSA---------HENSV-----M 143
Query: 161 LTSTQTPVESDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPV 220
L + +ESD K +D N I + N+ A + LQ V
Sbjct: 144 LANVHNSIESDMGTAAMYKALDHPHGPTNPAIPFDVQTPSNVFAAVGRGGLPTQSLQESV 203
Query: 221 SDAQ----------------SNECPATTDTMNQQEELTVEGGTINISSIYSQ 256
SD + + EC +T+N QE+L + ++NIS+ YSQ
Sbjct: 204 SDVENMAYQLQSQLLHGRPCATECSTPNNTLNGQEDLASDSLSVNISNAYSQ 255
>gi|312283067|dbj|BAJ34399.1| unnamed protein product [Thellungiella halophila]
Length = 428
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 164/294 (55%), Gaps = 52/294 (17%)
Query: 18 FMSKKEAASNI--------TNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILRE 69
F+ +KE++S ++ + N K + RSKHS TEQRRRSKIN+RFQ+LR+
Sbjct: 129 FIMRKESSSTSQSQRVDLRVKADVRGSGNDQKLNTPRSKHSATEQRRRSKINDRFQMLRQ 188
Query: 70 IIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFA 129
+IP+SDQKRD ASFLLEVIEY+Q+LQEK KYE YQ W+ EP KL+ W+ ++ ++
Sbjct: 189 LIPNSDQKRDKASFLLEVIEYIQFLQEKANKYETPYQGWNHEPAKLLNWQRNNQQL---- 244
Query: 130 TQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACKPMDRQPEVAN 189
+ G+ F K ++ ++ + L + Q +D Q E N
Sbjct: 245 -----VPEGT---VAFAPKLEEEKSNIPVSALATAQGGT------------ID-QSETLN 283
Query: 190 KGISISMPLQGNLPAPARSDSVL--------LHPLQRPVSDAQSNECPATTDTMNQ---- 237
+ + + P P +S+S+ + V+ +++ E ++ ++ Q
Sbjct: 284 RAMPTTTP----FPMSVQSNSLFSPVIAGNPVTQFHTRVASSETVEPSPSSRSLTQPLKE 339
Query: 238 ---QEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRA 288
+E+ V G I+ISS+YSQGL+ L +ALE++G+DL++A+ISV+I+L K++
Sbjct: 340 EGEEEDEEVHEGNISISSVYSQGLVKTLREALENSGVDLTKASISVEIELAKQS 393
>gi|8346550|emb|CAB93714.1| myc-like protein [Arabidopsis thaliana]
Length = 530
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 111/300 (37%), Positives = 171/300 (57%), Gaps = 38/300 (12%)
Query: 1 MRTTKGNREEEDYEDDE-FMSKKEAASNI--------TNSNAKDGKNSDKASVIRSKHSV 51
+R+ KG+ +E+D +D+E F+ KKE++S ++ + N K + RSKHS
Sbjct: 224 IRSAKGSSQEDDLDDEEDFIMKKESSSTSQSHRVDLRVKADVRGSPNDQKLNTPRSKHSA 283
Query: 52 TEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAE 111
TEQRRRSKIN+RFQ+LR++IP+SDQKRD ASFLLEVIEY+Q+LQEK KY SYQ W+ E
Sbjct: 284 TEQRRRSKINDRFQMLRQLIPNSDQKRDKASFLLEVIEYIQFLQEKADKYVTSYQGWNHE 343
Query: 112 PTKLMPWRNSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESD 171
P KL+ W++++ N P G F K ++ ++ ++L + Q V
Sbjct: 344 PAKLLNWQSNN----NQQLVPE--------GVAFAPKLEEEKNNIPVSVLATAQGVVIDH 391
Query: 172 PNRDIACK-PMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPA 230
P P+ Q S P+ P P V+ +++ E
Sbjct: 392 PTTATTSPFPLSIQSN------SFFSPVIAGNPVPQ---------FHARVASSEAVEPSP 436
Query: 231 TTDTMNQQEELTVEGGTINISSIYSQG-LLNNLTQALESAGIDLSQANISVQIDLGKRAN 289
++ + ++E+ V G I ISS+YSQG L+ L +ALE++G+DL++A+ISV+I+L K+++
Sbjct: 437 SSRSQKEEEDEEVLEGNIRISSVYSQGRLVKTLREALENSGVDLTKASISVEIELAKQSS 496
>gi|302799306|ref|XP_002981412.1| hypothetical protein SELMODRAFT_451475 [Selaginella moellendorffii]
gi|300150952|gb|EFJ17600.1| hypothetical protein SELMODRAFT_451475 [Selaginella moellendorffii]
Length = 487
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/299 (39%), Positives = 158/299 (52%), Gaps = 37/299 (12%)
Query: 2 RTTKGNREEEDYEDDEFMSKKEAASNI-TNSNAKDGKNSDKASVIRSKHSVTEQRRRSKI 60
R+ + ++ D E+ + + + EAAS NS + D K++ RSKHS TEQRRRSKI
Sbjct: 200 RSAQSEGDDNDSEERKKIHRGEAASREDINSRSID----VKSNTSRSKHSATEQRRRSKI 255
Query: 61 NER-------FQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPT 113
N+R FQ+LR+++PH DQKRD ASFLLEVIEYVQ LQE+V+K+E S + E
Sbjct: 256 NDRLRSTHFVFQMLRDLLPHGDQKRDKASFLLEVIEYVQSLQERVKKFEASEKGRYQERL 315
Query: 114 KLMPWRNSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPN 173
K +P W V++ + + ++ D S S T + V P+
Sbjct: 316 KPVP-----WDVKSSTSLKEVPDSSRDKCALLE---DGKSRSFGATTSRAMGRQVAQAPS 367
Query: 174 RDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSV--LLHPLQRPVSDAQSNECPAT 231
R A P+ S S P NL A D QR +DA P
Sbjct: 368 RP-AMSPL----------ASTSTPAVENLDATTTRDKTGERSSESQRQANDASRQSTPVE 416
Query: 232 TDTMNQQE----ELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGK 286
T T QQ+ EL ++ G I++S+ YSQGLL LT AL S+G+DLS+ANISVQI+LGK
Sbjct: 417 TATAQQQQGSSNELPIKQGLISLSTAYSQGLLEALTSALHSSGLDLSKANISVQIELGK 475
>gi|302773049|ref|XP_002969942.1| hypothetical protein SELMODRAFT_451477 [Selaginella moellendorffii]
gi|300162453|gb|EFJ29066.1| hypothetical protein SELMODRAFT_451477 [Selaginella moellendorffii]
Length = 487
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/303 (38%), Positives = 157/303 (51%), Gaps = 45/303 (14%)
Query: 2 RTTKGNREEEDYEDDEFMSKKEAASNI-TNSNAKDGKNSDKASVIRSKHSVTEQRRRSKI 60
R+ + ++ D E+ + + + EAAS NS + D K++ RSKHS TEQRRRSKI
Sbjct: 200 RSAQSEGDDNDSEERKKIHRGEAASREDINSRSID----VKSNTSRSKHSATEQRRRSKI 255
Query: 61 NER-------FQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPT 113
N+R FQ+LR+++PH DQKRD ASFLLEVIEYVQ LQE+V+K+E S + E
Sbjct: 256 NDRLRSTHFVFQMLRDLLPHGDQKRDKASFLLEVIEYVQSLQERVKKFEASEKGRYQERL 315
Query: 114 KLMPW----RNSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVE 169
K +PW S V + + A+ D S S T + V
Sbjct: 316 KPVPWDVKSSTSLKEVPDSSRDKCALLE------------DGKSRSFGATTSRAMGRQVG 363
Query: 170 SDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSV--LLHPLQRPVSDAQSNE 227
P+R A P+ S S P NL A + QR +DA
Sbjct: 364 QAPSRP-AMSPL----------ASTSAPAVENLDATNTREKTGERSSESQRQANDASRQS 412
Query: 228 CPATTDTMNQQE----ELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQID 283
P T T QQ+ EL ++ G I++S+ YSQGLL LT AL S+G+DLS+ANISVQI+
Sbjct: 413 TPVETATAQQQQGSSNELPIKQGLISLSTAYSQGLLEALTSALHSSGLDLSKANISVQIE 472
Query: 284 LGK 286
LGK
Sbjct: 473 LGK 475
>gi|413938683|gb|AFW73234.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 429
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/253 (39%), Positives = 145/253 (57%), Gaps = 36/253 (14%)
Query: 43 SVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
S RSKHS TEQRRR+KIN+R +ILRE++PH DQKRD ASFLLEVIEY+++LQEKVQKYE
Sbjct: 170 STPRSKHSATEQRRRTKINDRLEILRELLPHGDQKRDKASFLLEVIEYIRFLQEKVQKYE 229
Query: 103 VSYQDWSAEPTK-----LMPWRNSHWRVQNFATQPHAIKNGSGPGSMFPGK--FDDNSIS 155
SA+P K MPW ++R T+ G P + K +D +
Sbjct: 230 ------SAQPEKNHEDSSMPWAKVYYRSCWKNTENIIQGGGLAPSTKDENKEQYDSKQTT 283
Query: 156 MSPTMLTSTQTPVESDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHP 215
++ + L TQ+ E+ N DI+ + + A R+D+ + P
Sbjct: 284 VASSALFDTQSARETSAN-DISSQ-------------------KATSKAKCRADNSV--P 321
Query: 216 LQRPVSDAQSNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQ 275
++P + S A T+++ E+ T++ T ++S YSQGLLN LTQAL+ +G+D SQ
Sbjct: 322 GKQPPWLSMST-SDADNKTLSKNEKQTLQEDTQSLSDAYSQGLLNRLTQALKRSGVDPSQ 380
Query: 276 ANISVQIDLGKRA 288
A+ISV+I + +RA
Sbjct: 381 ASISVEISMDRRA 393
>gi|297805864|ref|XP_002870816.1| hypothetical protein ARALYDRAFT_916432 [Arabidopsis lyrata subsp.
lyrata]
gi|297316652|gb|EFH47075.1| hypothetical protein ARALYDRAFT_916432 [Arabidopsis lyrata subsp.
lyrata]
Length = 295
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/294 (36%), Positives = 159/294 (54%), Gaps = 33/294 (11%)
Query: 43 SVIRSKHSVTEQRRRSKINERFQILREIIPHS--DQKRDTASFLLEVIEYVQYLQEKVQK 100
S RSKHS TEQRRRSKINERFQ L +IIP + DQKRD ASFLLEVIEY+ +LQEKV
Sbjct: 32 SSCRSKHSETEQRRRSKINERFQSLMDIIPQNQNDQKRDKASFLLEVIEYIHFLQEKVHM 91
Query: 101 YEVS-YQDWSAEPTKLMPWRNSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPT 159
YE S +Q W PTKL+PWRN++ V P K+ S +++++ +
Sbjct: 92 YEGSDHQMWDQGPTKLIPWRNNYGSVVEVNDHPKIGKSFSS----------NDNVAATSG 141
Query: 160 MLTSTQTPVESDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRP 219
+L+ Q + D + + K ++ P A + +P + +L + H +P
Sbjct: 142 LLSDMQNYADPDIDSAVNTKILEGCPVSA---VPSYLPTEPSL-------QFVQHDFWQP 191
Query: 220 VSDAQSNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANIS 279
+ C T D N E ++ ++S++ SQ +L+ LT+AL+S+G+++ + IS
Sbjct: 192 ----KPVNC-NTDDLFNSNEAISP-----SLSTVCSQRVLHTLTEALKSSGVNMPETMIS 241
Query: 280 VQIDLGKRANRGLMPEASVAKDLENPPSINQAMAKLRDVSSGEDSDHSQKRLRK 333
VQ+ L KRA+R A ++D N + + + S D DHSQKR R+
Sbjct: 242 VQLSLRKRADREYSSAAFASEDNCNGIADEEGDSPTETRSFCNDIDHSQKRTRR 295
>gi|242062666|ref|XP_002452622.1| hypothetical protein SORBIDRAFT_04g029270 [Sorghum bicolor]
gi|241932453|gb|EES05598.1| hypothetical protein SORBIDRAFT_04g029270 [Sorghum bicolor]
Length = 752
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/250 (38%), Positives = 140/250 (56%), Gaps = 29/250 (11%)
Query: 43 SVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
S RSKHS TEQRRR+KIN+R +ILRE++PH DQKRD ASFLLEVIEY+++LQEKVQKYE
Sbjct: 178 STPRSKHSATEQRRRTKINDRLEILRELLPHGDQKRDKASFLLEVIEYIRFLQEKVQKYE 237
Query: 103 VSYQDWSAEPTKLMPWRNSHWRVQNFATQPHAIKNGSGPGSMFPG----KFDDNSISMSP 158
++ + E + MPW ++R T+ I G G + ++ +++
Sbjct: 238 SAHPQKNHEDSS-MPWAKVYYRSCWKNTE--NINQGGGLAASTQDTNKEQYGSKQTTVAS 294
Query: 159 TMLTSTQTPVESDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQR 218
+ L TQ+ E+ N + KP A+ I+ S L L
Sbjct: 295 SALFDTQSAREASANDISSQKPTSTAQSRADNNIA----------------SKQLPWLSM 338
Query: 219 PVSDAQSNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANI 278
SD+ +N T+++ E+ T+ T ++S YSQGLLN LTQAL+ +G+D SQA+I
Sbjct: 339 STSDSDNNR------TLSKNEKQTLHEDTQSLSDAYSQGLLNRLTQALKRSGVDPSQASI 392
Query: 279 SVQIDLGKRA 288
SV+I + +R
Sbjct: 393 SVEISMDRRG 402
>gi|255645744|gb|ACU23365.1| unknown [Glycine max]
Length = 203
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 104/166 (62%), Gaps = 11/166 (6%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
RSKHS TEQRRRSKINERFQ+LR++IP +DQKRD ASFLLEVIEY+Q+LQEK+Q YE +Y
Sbjct: 44 RSKHSETEQRRRSKINERFQVLRDLIPQNDQKRDKASFLLEVIEYIQFLQEKIQIYEQTY 103
Query: 106 QDWSAEPTKLMPWRNSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQ 165
+ W+ EPTKL PWRN H +N A +NGS D+ + ++SP + + Q
Sbjct: 104 EGWNQEPTKLTPWRNHHGPAENTTDPSQASQNGS---------VDEKNNNVSPLLPKNVQ 154
Query: 166 TPVESDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSV 211
+ESD + K D P + + + M ++ ++ P S +
Sbjct: 155 NLIESDFSMTTIQK--DHTPGSTTEAVPLPMQMRLDMFDPIVSSGM 198
>gi|357143621|ref|XP_003572986.1| PREDICTED: transcription factor BIM1-like [Brachypodium distachyon]
Length = 413
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/251 (39%), Positives = 140/251 (55%), Gaps = 37/251 (14%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
RSKHS TEQRRR+KIN+R ILRE++P+ DQKRD ASFLLEVIEY++ LQEK QKYE +
Sbjct: 164 RSKHSATEQRRRTKINDRLDILRELLPNCDQKRDKASFLLEVIEYIRLLQEKCQKYESAI 223
Query: 106 QDWSAEPTKLMPWRNSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDN--------SISMS 157
+ +K M W + R + TQ I G G G + D N I+++
Sbjct: 224 PEKDPTDSKSMAWDKVYCRSRWRNTQ--NISQGQG-GGLSAATEDMNNEQHCSPKGITVA 280
Query: 158 PTMLTSTQTPVESDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQ 217
PT L +TQ+ E+ A+ +I ++ N+P + L L
Sbjct: 281 PTSLFTTQSVKETS--------------TTASSSQNI---IENNMP------NNQLSWLS 317
Query: 218 RPVSDAQSNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQAN 277
+ SN A+ +++QE ++ T ++SS YSQGLL+ L +AL+ +G+D SQAN
Sbjct: 318 MSTMNQNSN---ASNSKLSKQETQSLRNDTQSLSSAYSQGLLHKLKEALQKSGVDPSQAN 374
Query: 278 ISVQIDLGKRA 288
ISV+I++ KRA
Sbjct: 375 ISVEINMDKRA 385
>gi|326525533|dbj|BAJ88813.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 323
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 129/251 (51%), Gaps = 39/251 (15%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
RSKHS TEQRRR+KIN+R ILR+++P+ DQKRD ASFLLEVIEY++ LQEK QKYE
Sbjct: 74 RSKHSATEQRRRTKINDRLDILRDLLPNCDQKRDKASFLLEVIEYIRLLQEKCQKYESGI 133
Query: 106 QDWSAEPTKLMPWRNSHWRVQNFATQPHAIKNGSGPGS----MFPGKFDDNSISMSPTM- 160
+ + MPW ++R + TQ + G G + M ++ I+ +P
Sbjct: 134 PEQNNVDANCMPWDKVYYRSRWRNTQNISQVQGGGLSATTEDMNKEQYSSKGIAGAPAAS 193
Query: 161 LTSTQTPVESDPNRDIACKPMDRQPEVANKGISISMPLQG----NLPAPARSDSVLLHPL 216
L STQ+ R+ + P Q N S +P N A + + H
Sbjct: 194 LFSTQSV------RETSAAPSSSQDIAENSMPSNQLPWLSMSTMNQNCDASNRVLTKHDT 247
Query: 217 QRPVSDAQSNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQA 276
QRP D+QS +SS YSQGLL+ L +AL+ +G+D SQA
Sbjct: 248 QRPQDDSQS------------------------LSSAYSQGLLHKLKEALQKSGVDPSQA 283
Query: 277 NISVQIDLGKR 287
ISV+I++ +R
Sbjct: 284 KISVEINMDRR 294
>gi|388491052|gb|AFK33592.1| unknown [Lotus japonicus]
Length = 215
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/126 (53%), Positives = 88/126 (69%), Gaps = 9/126 (7%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
RSKHS TEQRRR KINERFQ+L+++IP +DQKRD AS LLEVI+YVQ+LQEK+Q YE S+
Sbjct: 47 RSKHSETEQRRRFKINERFQVLKDLIPQNDQKRDKASLLLEVIQYVQFLQEKLQIYEQSH 106
Query: 106 QDWSAEPTKLMPWRNSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQ 165
+ W+ EPTKL+PWRN H ++ AI+NGS K +D +S + + Q
Sbjct: 107 EGWNQEPTKLIPWRNHHGPAEHTTDPSQAIQNGS-----VIAKNND----ISSLLPQNVQ 157
Query: 166 TPVESD 171
P+ESD
Sbjct: 158 NPIESD 163
>gi|168048755|ref|XP_001776831.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671835|gb|EDQ58381.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 876
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/115 (55%), Positives = 76/115 (66%), Gaps = 13/115 (11%)
Query: 5 KGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSD-KASVIRSKHSVTEQRRRSKINER 63
KGNR+E K + A + D KN D + S RSKHS TEQRRRSKIN+R
Sbjct: 415 KGNRKES------ISCKGDTAQRM------DVKNGDMRGSTPRSKHSATEQRRRSKINDR 462
Query: 64 FQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPW 118
FQ+LR+++PHSDQKRD ASFLLEVIEY+Q LQEKV+KYE + Q E K M W
Sbjct: 463 FQMLRDLVPHSDQKRDKASFLLEVIEYIQVLQEKVRKYETTEQGRHQERLKSMVW 517
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 40/43 (93%)
Query: 243 VEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLG 285
++GG IN+SS+YSQ LL+ LT+AL+S+G+DLS+ANISVQIDLG
Sbjct: 781 IQGGVINVSSVYSQSLLDTLTRALQSSGVDLSRANISVQIDLG 823
>gi|168013859|ref|XP_001759483.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689413|gb|EDQ75785.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 845
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 35 DGKNSDKASVI-RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQY 93
D KN+D V RSKHS TEQRRRSKIN+RFQ+LR+++PHSDQKRD ASFLLEVIEY+Q
Sbjct: 317 DSKNADLRGVTPRSKHSATEQRRRSKINDRFQMLRDLVPHSDQKRDKASFLLEVIEYIQV 376
Query: 94 LQEKVQKYEVSYQDWSAEPTKLMPW 118
LQ+KV+KYE Q E K M W
Sbjct: 377 LQDKVRKYETVEQGRHQERLKSMVW 401
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 63/91 (69%), Gaps = 5/91 (5%)
Query: 243 VEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRANRGLMP---EASVA 299
++GG IN+SS+YSQGLL+ LT+AL+S+G+DLS+ANISVQIDLGK A + P A VA
Sbjct: 658 IQGGVINVSSVYSQGLLDTLTRALQSSGVDLSRANISVQIDLGKNAT--VAPGDTSAKVA 715
Query: 300 KDLENPPSINQAMAKLRDVSSGEDSDHSQKR 330
E+ +Q+ + R S +S+ ++KR
Sbjct: 716 TTPESSAQSHQSQGRTRPAPSVPESEPARKR 746
>gi|218191496|gb|EEC73923.1| hypothetical protein OsI_08775 [Oryza sativa Indica Group]
Length = 443
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 66/82 (80%)
Query: 43 SVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
S RSKHS TEQRRR+KIN+R +ILRE++PH+DQKRD ASFL EVIEY+++LQEKVQKYE
Sbjct: 188 STPRSKHSATEQRRRTKINDRLEILRELLPHTDQKRDKASFLSEVIEYIRFLQEKVQKYE 247
Query: 103 VSYQDWSAEPTKLMPWRNSHWR 124
+ + + E +K MPW ++R
Sbjct: 248 EADPERNHEDSKSMPWAKVYYR 269
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 40/53 (75%)
Query: 236 NQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRA 288
N+ E+ T+ +ISS YSQGL N LT+AL+ +G+D SQANI+V+I+L KRA
Sbjct: 364 NKHEKQTLHDENHSISSAYSQGLFNRLTEALKKSGLDPSQANIAVEINLAKRA 416
>gi|222623596|gb|EEE57728.1| hypothetical protein OsJ_08226 [Oryza sativa Japonica Group]
Length = 442
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 66/82 (80%)
Query: 43 SVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
S RSKHS TEQRRR+KIN+R +ILRE++PH+DQKRD ASFL EVIEY+++LQEKVQKYE
Sbjct: 187 STPRSKHSATEQRRRTKINDRLEILRELLPHTDQKRDKASFLSEVIEYIRFLQEKVQKYE 246
Query: 103 VSYQDWSAEPTKLMPWRNSHWR 124
+ + + E +K MPW ++R
Sbjct: 247 EADPERNHEDSKSMPWAKVYYR 268
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 40/53 (75%)
Query: 236 NQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRA 288
N+ E+ T+ +ISS YSQGL N LT+AL+ +G+D SQANI+V+I+L KRA
Sbjct: 363 NKHEKQTLHDENHSISSAYSQGLFNRLTEALKKSGLDPSQANIAVEINLAKRA 415
>gi|115448427|ref|NP_001047993.1| Os02g0726700 [Oryza sativa Japonica Group]
gi|46390601|dbj|BAD16085.1| bHLH protein-like [Oryza sativa Japonica Group]
gi|113537524|dbj|BAF09907.1| Os02g0726700 [Oryza sativa Japonica Group]
Length = 344
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 66/82 (80%)
Query: 43 SVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
S RSKHS TEQRRR+KIN+R +ILRE++PH+DQKRD ASFL EVIEY+++LQEKVQKYE
Sbjct: 144 STPRSKHSATEQRRRTKINDRLEILRELLPHTDQKRDKASFLSEVIEYIRFLQEKVQKYE 203
Query: 103 VSYQDWSAEPTKLMPWRNSHWR 124
+ + + E +K MPW ++R
Sbjct: 204 EADPERNHEDSKSMPWAKVYYR 225
>gi|168029266|ref|XP_001767147.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681643|gb|EDQ68068.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 157
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/76 (71%), Positives = 60/76 (78%)
Query: 41 KASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQK 100
+ S RSKHS TEQRRRSKIN+RFQ+LR ++PHSDQKRD ASFLLEVIEYVQ LQEKVQK
Sbjct: 3 RGSTPRSKHSATEQRRRSKINDRFQMLRNLVPHSDQKRDKASFLLEVIEYVQVLQEKVQK 62
Query: 101 YEVSYQDWSAEPTKLM 116
YE + Q E K M
Sbjct: 63 YETAEQGRHQERLKSM 78
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 40/42 (95%)
Query: 243 VEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDL 284
++GG IN+SS+YSQGLL+ LT+AL+S+GIDLSQANISVQIDL
Sbjct: 116 IQGGVINVSSVYSQGLLDTLTRALQSSGIDLSQANISVQIDL 157
>gi|413938681|gb|AFW73232.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413938682|gb|AFW73233.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 311
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/99 (58%), Positives = 70/99 (70%), Gaps = 13/99 (13%)
Query: 43 SVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
S RSKHS TEQRRR+KIN+R +ILRE++PH DQKRD ASFLLEVIEY+++LQEKVQKYE
Sbjct: 170 STPRSKHSATEQRRRTKINDRLEILRELLPHGDQKRDKASFLLEVIEYIRFLQEKVQKYE 229
Query: 103 VSYQDWSAEPTK-----LMPWRNSHWR--VQNFATQPHA 134
SA+P K MPW ++R +N PHA
Sbjct: 230 ------SAQPEKNHEDSSMPWAKVYYRSCWKNTEVIPHA 262
>gi|226503795|ref|NP_001146169.1| uncharacterized protein LOC100279738 [Zea mays]
gi|219886045|gb|ACL53397.1| unknown [Zea mays]
Length = 264
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 65/87 (74%), Gaps = 11/87 (12%)
Query: 43 SVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
S RSKHS TEQRRR+KIN+R +ILRE++PH DQKRD ASFLLEVIEY+++LQEKVQKYE
Sbjct: 170 STPRSKHSATEQRRRTKINDRLEILRELLPHGDQKRDKASFLLEVIEYIRFLQEKVQKYE 229
Query: 103 VSYQDWSAEPTK-----LMPWRNSHWR 124
SA+P K MPW ++R
Sbjct: 230 ------SAQPEKNHEDSSMPWAKVYYR 250
>gi|53983010|gb|AAV25873.1| Putative bHLH family protein [Brassica oleracea]
Length = 240
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 63/86 (73%), Gaps = 7/86 (8%)
Query: 38 NSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEK 97
N K + RSKHS TEQRRRSKIN+ Q LR++IP+SDQKRD ASFLLEVI+Y+ +LQEK
Sbjct: 75 NEQKPNTPRSKHSATEQRRRSKINDS-QTLRQLIPNSDQKRDKASFLLEVIQYIHFLQEK 133
Query: 98 VQKYEVSYQDWSAEPTKLMPWRNSHW 123
V K+E D ++ P ++ RNS +
Sbjct: 134 VDKHE----DTTSFP--VLGQRNSFF 153
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 39/47 (82%)
Query: 241 LTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKR 287
L++ GTI+ISS+YSQGLL L++ L+S+G+DLS++ ISVQI L K+
Sbjct: 185 LSIHKGTISISSVYSQGLLKTLSETLQSSGVDLSRSRISVQIKLSKQ 231
>gi|449476558|ref|XP_004154770.1| PREDICTED: transcription factor BIM2-like [Cucumis sativus]
Length = 153
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 68/106 (64%), Gaps = 8/106 (7%)
Query: 231 TTDTMNQ----QEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGK 286
TT +NQ Q++LT E +IS YS GLL+ LTQALE++G+DLSQ NISV++D+GK
Sbjct: 49 TTGFLNQAVSDQDDLTPESELESISGAYSHGLLSTLTQALEASGVDLSQTNISVKVDVGK 108
Query: 287 RANRGLMPEASVAKDLENPPSINQAMAKLRDVSSGEDSDHSQKRLR 332
RANR + S+++D + NQ M + EDS+ + K+LR
Sbjct: 109 RANRAI----SLSEDDKQQSLNNQVMGQSIHGCFSEDSEQAHKKLR 150
>gi|449534478|ref|XP_004174189.1| PREDICTED: uncharacterized protein LOC101232185, partial [Cucumis
sativus]
Length = 183
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 84/161 (52%), Gaps = 15/161 (9%)
Query: 147 GKFDDNSISMSPTMLTSTQTPVESDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPA 206
G ++++ S MLT+ +++D +D A +G+ +SM Q P
Sbjct: 19 GSNHESAVVFSQAMLTNAPNVMDADLGPTAVLNAVDHTLVSATQGLPMSMHTQPIAFDPV 78
Query: 207 RSDSVLLHPLQRPVSDA-------QSNECPA----TTDTMNQ----QEELTVEGGTINIS 251
S+ L PVS + Q+ P TT +NQ Q++LT E +IS
Sbjct: 79 GRSSLSTESLDEPVSGSENISSRTQAELLPGRTCTTTGFLNQAVSDQDDLTPESELESIS 138
Query: 252 SIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRANRGL 292
YS GLL+ LTQALE++G+DLSQ NISV++D+GKRANR +
Sbjct: 139 GAYSHGLLSTLTQALEASGVDLSQTNISVKVDVGKRANRAI 179
>gi|384248993|gb|EIE22476.1| hypothetical protein COCSUDRAFT_47901 [Coccomyxa subellipsoidea
C-169]
Length = 295
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 91/185 (49%), Gaps = 23/185 (12%)
Query: 11 EDYEDDEFMSK-KEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILRE 69
E + + +S+ E A++ + + D K+S S S+H EQRRR++INER LR+
Sbjct: 79 ELAQHQQMLSRNAEPAASRGRTKSNDSKSS---SAYASRHQAAEQRRRTRINERLDRLRQ 135
Query: 70 IIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWS--AEPTKLMPWRNSHWRV-- 125
++PH++ + +TASFL EVI Y+Q LQ+++ + E + A+PT P S +
Sbjct: 136 VVPHAE-RANTASFLEEVITYIQGLQKRIAELEQAAGGGQVIAQPTIAQPATTSAPLMAQ 194
Query: 126 QNFATQPHAIK----------NGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRD 175
F P A + +G G G+ P D S S T+ Q P E+ P+
Sbjct: 195 AGFTAVPRAAQSAEVPAPAANHGHGAGAQGPLDARDK-FSFS---CTAAQAPQEAQPSAQ 250
Query: 176 IACKP 180
+P
Sbjct: 251 PHTQP 255
>gi|356575289|ref|XP_003555774.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 633
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 67/122 (54%), Gaps = 4/122 (3%)
Query: 8 REEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQIL 67
R+ +D +D E S++E+A + + G S K S H+++E+RRR +INE+ + L
Sbjct: 336 RKTKDTDDSECHSEEESAGAKKTAGGQGGAGS-KRSRAAEVHNLSERRRRDRINEKMRAL 394
Query: 68 REIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQN 127
+E+IP+ + K D AS L E IEY++ LQ +VQ + + P ++P H +
Sbjct: 395 QELIPNCN-KVDKASMLDEAIEYLKTLQLQVQIMSMGAGLY--MPPMMLPAGMQHMHAPH 451
Query: 128 FA 129
A
Sbjct: 452 MA 453
>gi|159464162|ref|XP_001690311.1| predicted protein [Chlamydomonas reinhardtii]
gi|52000457|dbj|BAD44756.1| NSG17 protein [Chlamydomonas reinhardtii]
gi|158284299|gb|EDP10049.1| predicted protein [Chlamydomonas reinhardtii]
Length = 535
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
H EQRRR++INER ++LR+++PH++ + +TA FL EVI+Y++ L+ + E +
Sbjct: 141 HQAAEQRRRTRINERLELLRKLVPHAE-RANTACFLEEVIKYIEALKARTLDLESQVEAL 199
Query: 109 SAEPT 113
+ +P
Sbjct: 200 TGKPV 204
>gi|56784181|dbj|BAD81566.1| putative BP-5 protein [Oryza sativa Japonica Group]
Length = 565
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 34 KDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQY 93
K G S K S H+++E+RRR +INE+ + L+E+IP+ + K D AS L E IEY++
Sbjct: 302 KSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCN-KIDKASMLDEAIEYLKT 360
Query: 94 LQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFATQPH 133
LQ +VQ +S P L+P H ++ A PH
Sbjct: 361 LQLQVQM--MSMGTGLCIPPMLLPTAMQHLQIPPMAHFPH 398
>gi|307107887|gb|EFN56128.1| hypothetical protein CHLNCDRAFT_144757 [Chlorella variabilis]
Length = 472
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 29 TNSNAKDGKNSDKASVI-RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEV 87
T+ NA+ + SV+ + H E RRRS+INER + LR ++PH++ + +TA+FL EV
Sbjct: 119 TSYNARHQQAPSSRSVLFHAMHVQAEARRRSRINERLEALRLLVPHTE-RANTANFLEEV 177
Query: 88 IEYVQYLQEKVQKYE 102
++YVQ LQ +V E
Sbjct: 178 VQYVQRLQSRVTDLE 192
>gi|297596562|ref|NP_001042775.2| Os01g0286100 [Oryza sativa Japonica Group]
gi|215717101|dbj|BAG95464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673123|dbj|BAF04689.2| Os01g0286100 [Oryza sativa Japonica Group]
Length = 637
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 34 KDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQY 93
K G S K S H+++E+RRR +INE+ + L+E+IP+ + K D AS L E IEY++
Sbjct: 374 KSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCN-KIDKASMLDEAIEYLKT 432
Query: 94 LQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFATQPH 133
LQ +VQ +S P L+P H ++ A PH
Sbjct: 433 LQLQVQM--MSMGTGLCIPPMLLPTAMQHLQIPPMAHFPH 470
>gi|222618221|gb|EEE54353.1| hypothetical protein OsJ_01348 [Oryza sativa Japonica Group]
Length = 705
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 34 KDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQY 93
K G S K S H+++E+RRR +INE+ + L+E+IP+ + K D AS L E IEY++
Sbjct: 442 KSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCN-KIDKASMLDEAIEYLKT 500
Query: 94 LQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFATQPH 133
LQ +VQ +S P L+P H ++ A PH
Sbjct: 501 LQLQVQM--MSMGTGLCIPPMLLPTAMQHLQIPPMAHFPH 538
>gi|414871802|tpg|DAA50359.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 562
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
H+++E+RRR +INE+ + L+E+IPH + K D AS L E IEY++ LQ +VQ +
Sbjct: 338 HNLSERRRRDRINEKMRALQELIPHCN-KTDKASMLDEAIEYLKSLQLQVQMMWMGSAGI 396
Query: 109 SAEPTKLMP 117
+A P + P
Sbjct: 397 AAPPAVMFP 405
>gi|226493691|ref|NP_001147809.1| PIL5 [Zea mays]
gi|195613866|gb|ACG28763.1| PIL5 [Zea mays]
Length = 539
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
H+++E+RRR +INE+ + L+E+IPH + K D AS L E IEY++ LQ +VQ +
Sbjct: 338 HNLSERRRRDRINEKMRALQELIPHCN-KTDKASMLDEAIEYLKSLQLQVQMMWMGSAGI 396
Query: 109 SAEPTKLMP 117
+A P + P
Sbjct: 397 AAPPAVMFP 405
>gi|374412422|gb|AEZ49169.1| helix-loop-helix DNA-binding domain containing protein [Wolffia
australiana]
Length = 368
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 55/98 (56%)
Query: 8 REEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQIL 67
REE+D D + E S K + K S H+++E+RRR +INE+ + L
Sbjct: 184 REEDDGVDYQTEENGEGESTNRRHAGKGRLMNKKRSRSSEVHNLSERRRRDRINEKMRAL 243
Query: 68 REIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
+E++P +++ D AS L EVIEY++ LQ +VQ + Y
Sbjct: 244 QELVPCCNKQVDKASMLEEVIEYLKSLQMQVQAMSMGY 281
>gi|218188008|gb|EEC70435.1| hypothetical protein OsI_01449 [Oryza sativa Indica Group]
Length = 693
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 34 KDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQY 93
K G S K S H+++E+RRR +INE+ + L+E+IP+ + K D AS L E IEY++
Sbjct: 430 KSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCN-KIDKASMLDEAIEYLKT 488
Query: 94 LQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFATQPH 133
LQ +VQ +S P L+P H ++ A PH
Sbjct: 489 LQLQVQM--MSMGTGLCIPPMLLPTAMQHLQIPPMAHFPH 526
>gi|357437785|ref|XP_003589168.1| Transcription factor SPATULA [Medicago truncatula]
gi|355478216|gb|AES59419.1| Transcription factor SPATULA [Medicago truncatula]
Length = 287
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 61/114 (53%), Gaps = 22/114 (19%)
Query: 33 AKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQ 92
A ++S K S H+++E+RRRSKINE+ + L+ +IP+S+ K D AS L E IEY++
Sbjct: 80 APPPRSSSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSN-KTDKASMLDEAIEYLK 138
Query: 93 YLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFATQPHAIKNGSGPGSMFP 146
LQ +VQ V RN ++ P ++ GS P +MFP
Sbjct: 139 QLQLQVQMLMV---------------RNG------YSLHPMSLSGGSRPPTMFP 171
>gi|355320016|emb|CBY88797.1| basic helix-loop-helix transcription factor [Humulus lupulus]
Length = 695
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 16 DEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSD 75
DE K A T S K G D+ S + H + E+RRR K+NERF ILR ++P
Sbjct: 447 DENSPKAGAGDTTTRSFRKGGTPQDELS---ANHVMAERRRREKLNERFIILRSLVPFV- 502
Query: 76 QKRDTASFLLEVIEYVQYLQEKVQKYE 102
K D AS L + IEYV+ L++KVQ E
Sbjct: 503 TKMDKASILGDTIEYVKQLRKKVQDLE 529
>gi|297794285|ref|XP_002865027.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
gi|297310862|gb|EFH41286.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 32 NAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYV 91
N +NS K ++ H+++E+RRRSKINE+ + L+++IP+S+ K D AS L E IEY+
Sbjct: 77 NGAKQRNSLKRTIDAQFHNLSEKRRRSKINEKMKALQKLIPNSN-KTDKASMLDEAIEYL 135
Query: 92 QYLQEKVQKYEVSYQDWSAEPTKLMP-WRNSHWRV 125
+ LQ +VQ V P +L P +H R+
Sbjct: 136 KQLQLQVQTLAV-MNGLGLNPMRLPPVLPPTHTRI 169
>gi|224082612|ref|XP_002306764.1| predicted protein [Populus trichocarpa]
gi|222856213|gb|EEE93760.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 8 REEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSK----HSVTEQRRRSKINER 63
R+ D ED E+ S EAA +S A + S RS+ H+++E+RRR +INE+
Sbjct: 148 RKTIDTEDSEYQS--EAAELDLDSMAGNNPTKRSGSTRRSRAAEVHNLSERRRRDRINEK 205
Query: 64 FQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+ L+E+IPH K D AS L E IEY++ LQ ++Q
Sbjct: 206 MRALQELIPHC-YKTDKASMLDEAIEYLKSLQLQLQ 240
>gi|255560265|ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ricinus communis]
gi|223539719|gb|EEF41301.1| Phytochrome-interacting factor, putative [Ricinus communis]
Length = 572
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 58/104 (55%), Gaps = 17/104 (16%)
Query: 2 RTTKGNREEEDY---EDDEFMS---KKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQR 55
R KG EE +Y ED EF S KK+A G S K S H+++E+R
Sbjct: 322 RKRKGREEETEYYHSEDVEFESADAKKQA----------RGSTSTKRSRAAEVHNLSERR 371
Query: 56 RRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
RR +INE+ + L+E+IP + K D AS L E IEY++ LQ +VQ
Sbjct: 372 RRDRINEKMRALQELIPRCN-KSDKASMLDEAIEYLKSLQLQVQ 414
>gi|402077970|gb|EJT73319.1| hypothetical protein GGTG_10163 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 441
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
++ HS+ E+RRRSK+NE F L+ +IP + + L IEYV YL++ V K +
Sbjct: 178 KTAHSLIERRRRSKMNEEFATLKNMIPACTGEMHKLAILQASIEYVGYLEDCVSKLKAQR 237
Query: 106 QDWSAEPTKLMPWRNSHWRVQNFATQPHAIKNGSGPG 142
+D SA P +L P + + + A + + GSGPG
Sbjct: 238 EDASA-PMELAPPPMTTY---DGADEDQHHRLGSGPG 270
>gi|339778387|gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 11/119 (9%)
Query: 11 EDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREI 70
ED E++ +KK A++ A +G +A+ + H+++E+RRR +INE+ + L+E+
Sbjct: 296 EDAEEESVGAKKPASAR-----AGNGSKRGRAAEV---HNLSERRRRDRINEKMRALQEL 347
Query: 71 IPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFA 129
IP+ + K D AS L E IEY++ LQ +VQ + + P+ ++P H +
Sbjct: 348 IPNCN-KVDKASMLDEAIEYLKTLQLQVQIMSMGAGIYM--PSMMLPPGMPHMHAAHMG 403
>gi|339778397|gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 11/119 (9%)
Query: 11 EDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREI 70
ED E++ +KK A++ A +G +A+ + H+++E+RRR +INE+ + L+E+
Sbjct: 296 EDAEEESVGAKKPASAR-----AGNGSKRGRAAEV---HNLSERRRRDRINEKMRALQEL 347
Query: 71 IPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFA 129
IP+ + K D AS L E IEY++ LQ +VQ + + P+ ++P H +
Sbjct: 348 IPNCN-KVDKASMLDEAIEYLKTLQLQVQIMSMGAGMYM--PSMMLPPGMPHMHAAHMG 403
>gi|357441953|ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480302|gb|AES61505.1| Transcription factor PIF3 [Medicago truncatula]
Length = 721
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 11 EDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREI 70
ED ED+ KK AA G K S H+++E+RRR +INE+ + L+E+
Sbjct: 443 EDVEDESVGVKKGAAGR--------GVAGSKRSRAAEVHNLSERRRRDRINEKMRALQEL 494
Query: 71 IPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFAT 130
IP+ + K D AS L E IEY++ LQ +VQ + + P ++P H + A
Sbjct: 495 IPNCN-KVDKASMLDEAIEYLKTLQLQVQMMSMGAGLYM--PQMMLPAGMQHMHAPHMAA 551
>gi|339778391|gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778393|gb|AEK06078.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778395|gb|AEK06079.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778399|gb|AEK06081.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778401|gb|AEK06082.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778405|gb|AEK06084.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778407|gb|AEK06085.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778409|gb|AEK06086.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778411|gb|AEK06087.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778413|gb|AEK06088.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778415|gb|AEK06089.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778417|gb|AEK06090.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778419|gb|AEK06091.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778421|gb|AEK06092.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778423|gb|AEK06093.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778425|gb|AEK06094.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778427|gb|AEK06095.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778429|gb|AEK06096.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 11/119 (9%)
Query: 11 EDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREI 70
ED E++ +KK A++ A +G +A+ + H+++E+RRR +INE+ + L+E+
Sbjct: 296 EDAEEESVGAKKPASAR-----AGNGSKRGRAAEV---HNLSERRRRDRINEKMRALQEL 347
Query: 71 IPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFA 129
IP+ + K D AS L E IEY++ LQ +VQ + + P+ ++P H +
Sbjct: 348 IPNCN-KVDKASMLDEAIEYLKTLQLQVQIMSMGAGMYM--PSMMLPPGMPHMHAAHMG 403
>gi|339778403|gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 11/119 (9%)
Query: 11 EDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREI 70
ED E++ +KK A++ A +G +A+ + H+++E+RRR +INE+ + L+E+
Sbjct: 296 EDAEEESVGAKKPASAR-----AGNGSKRGRAAEV---HNLSERRRRDRINEKMRALQEL 347
Query: 71 IPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFA 129
IP+ + K D AS L E IEY++ LQ +VQ + + P+ ++P H +
Sbjct: 348 IPNCN-KVDKASMLDEAIEYLKTLQLQVQIMSMGAGMYM--PSMMLPPGMPHMHAAHMG 403
>gi|339778389|gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 11/119 (9%)
Query: 11 EDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREI 70
ED E++ +KK A++ A +G +A+ + H+++E+RRR +INE+ + L+E+
Sbjct: 296 EDAEEESVGAKKPASAR-----AGNGSKRGRAAEV---HNLSERRRRDRINEKMRALQEL 347
Query: 71 IPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFA 129
IP+ + K D AS L E IEY++ LQ +VQ + + P+ ++P H +
Sbjct: 348 IPNCN-KVDKASMLDEAIEYLKTLQLQVQIMSMGAGMYM--PSMMLPPGMPHMHAAHMG 403
>gi|224124534|ref|XP_002330047.1| predicted protein [Populus trichocarpa]
gi|222871472|gb|EEF08603.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 67/119 (56%), Gaps = 11/119 (9%)
Query: 11 EDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREI 70
ED E++ +KK+A + A +G ++A+ + H+++E+RRR +INE+ + L+E+
Sbjct: 432 EDVEEESVGAKKQAPAR-----AGNGSKRNRAAEV---HNLSERRRRDRINEKMRALQEL 483
Query: 71 IPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFA 129
IP+ + K D AS L E IEY++ LQ +VQ + + P+ ++P H +
Sbjct: 484 IPNCN-KVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYM--PSMMLPPGMPHMHAAHMG 539
>gi|356545930|ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 476
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 8 REEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQIL 67
R+ ++E+ EF S+ + G S K S H+++E+RRR +INE+ + L
Sbjct: 227 RKGREHEESEFQSEDVDFESPEAKKQVHGSTSTKRSRAAEVHNLSERRRRDRINEKMKAL 286
Query: 68 REIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
+E+IP + K D AS L E IEY++ LQ +VQ + Y
Sbjct: 287 QELIPRCN-KSDKASMLDEAIEYLKSLQLQVQMMSMGY 323
>gi|238015240|gb|ACR38655.1| unknown [Zea mays]
Length = 435
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 26/195 (13%)
Query: 10 EEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILRE 69
++D DDE + + S ++ K S A V H+++E+RRR +INE+ + L+E
Sbjct: 158 QDDDPDDE-------SGGMRRSCSRGAKRSRTAEV----HNLSERRRRDRINEKMRALQE 206
Query: 70 IIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFA 129
+IP+ + K D AS L E IEY++ LQ +VQ +S P L+P H ++ A
Sbjct: 207 LIPNCN-KIDKASMLDEAIEYLKTLQLQVQM--MSMGSGLCIPPMLLPPAMQHLQIPPAA 263
Query: 130 TQ-PHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACKPMDRQPEVA 188
PH + D NS + + + P P I P+ R
Sbjct: 264 AHFPHLGMGLGYGMGV----LDMNSAAAAAAAVPFPHMPGAHFPCPMIPGAPLPR----- 314
Query: 189 NKGISISMPLQGNLP 203
G+ I MP + +P
Sbjct: 315 --GLGIGMPARNTMP 327
>gi|357510373|ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatula]
gi|355500490|gb|AES81693.1| Transcription factor PIF1 [Medicago truncatula]
Length = 467
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 65/105 (61%), Gaps = 12/105 (11%)
Query: 2 RTTKGNREEE-DY--EDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRS 58
R KG EE +Y ED +F S EA NI+ S+ K + ++ H+++E+RRR
Sbjct: 221 RKRKGIEAEEWEYQSEDVDFESA-EAKKNISGSSTKRSRAAEV-------HNLSERRRRD 272
Query: 59 KINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV 103
+INE+ + L+E+IP S+ K D AS L E I+Y++ LQ +VQ+ ++
Sbjct: 273 RINEKMKALQELIPRSN-KSDKASMLDEAIDYLKSLQLQVQRVQL 316
>gi|336267086|ref|XP_003348309.1| hypothetical protein SMAC_02806 [Sordaria macrospora k-hell]
gi|380091963|emb|CCC10229.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 408
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
++ HS+ E+RRRSK+NE F +L+ +IP + + L IEY++YL++ V + + +
Sbjct: 154 KTAHSLIERRRRSKMNEEFALLKSMIPACTGEMHKLAILQASIEYIKYLEDCVARLQARH 213
Query: 106 QDWSAEP---TKLMP 117
Q +EP TK +P
Sbjct: 214 QSVPSEPGNATKSLP 228
>gi|297605234|ref|NP_001056902.2| Os06g0164400 [Oryza sativa Japonica Group]
gi|255676746|dbj|BAF18816.2| Os06g0164400, partial [Oryza sativa Japonica Group]
Length = 188
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 20 SKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRD 79
S+ EAA+ K S A V H+++E+RRRSKINE+ + L+ +IP+S+ K D
Sbjct: 6 SEPEAAAGARPRGGSGSKRSRAAEV----HNLSEKRRRSKINEKMKALQSLIPNSN-KTD 60
Query: 80 TASFLLEVIEYVQYLQEKVQKYEV--------SYQDWSAEPTK 114
AS L E IEY++ LQ +VQ + SY + EP +
Sbjct: 61 KASMLDEAIEYLKQLQLQVQMLSMRNGVYLNPSYLSGALEPAQ 103
>gi|255543048|ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical protein [Ricinus communis]
Length = 758
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 11/119 (9%)
Query: 11 EDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREI 70
ED E++ KK A + G K S H+++E+RRR +INE+ + L+E+
Sbjct: 440 EDVEEESVGGKKAAPAR--------GGTGSKRSRAAEVHNLSERRRRDRINEKMRALQEL 491
Query: 71 IPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFA 129
IP+ + K D AS L E IEY++ LQ +VQ + + P+ ++P H V + +
Sbjct: 492 IPNCN-KVDKASMLDEAIEYLKTLQLQVQIMSMGAGLY--MPSMMLPPGVPHMHVAHMS 547
>gi|51970054|dbj|BAD43719.1| putative bHLH transcription factor (bHLH073/ALCATRAZ) [Arabidopsis
thaliana]
Length = 210
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 37 KNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQE 96
+NS K S+ H+++E++RRSKINE+ + L+++IP+S+ K D AS L E IEY++ LQ
Sbjct: 86 RNSLKRSIDAQFHNLSEKKRRSKINEKMKALQKLIPNSN-KTDKASMLDEAIEYLKQLQL 144
Query: 97 KVQKYEV 103
+VQ V
Sbjct: 145 QVQTLAV 151
>gi|357119457|ref|XP_003561456.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 334
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 5 KGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERF 64
K R+E D E EA S GK +A+ + H+ +E+RRR +INE+
Sbjct: 107 KRGRDELDDSRCEDADDCEAVDETRTSRRPAGKRRARAAEV---HNQSERRRRDRINEKM 163
Query: 65 QILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+ L+E++PH + K D AS L E IEY++ LQ +VQ
Sbjct: 164 KALQELVPHCN-KSDKASILDEAIEYLKSLQLQVQ 197
>gi|342298438|emb|CBY05409.1| ALCATRAZ-like protein [Lepidium campestre]
Length = 197
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 32 NAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYV 91
N +NS K ++ H+++E+RRRSKINE+ + L+++IP+S+ K D AS L E IEY+
Sbjct: 80 NGGRQRNSLKRNIDAQFHNLSEKRRRSKINEKMKALQKLIPNSN-KTDKASMLDEAIEYL 138
Query: 92 QYLQEKVQKYEV 103
+ LQ +VQ V
Sbjct: 139 KQLQLQVQTLAV 150
>gi|255538250|ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
gi|223550891|gb|EEF52377.1| conserved hypothetical protein [Ricinus communis]
Length = 312
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 5 KGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERF 64
+G E D D S+K A S +NS K S H+++E+RRRS+INE+
Sbjct: 86 RGVSMENDLGDLSCDSEKGAEVAEVPSETVRPRNSSKRSRAAEVHNLSEKRRRSRINEKM 145
Query: 65 QILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+ L+ +IP+S+ K D AS L E IEY++ LQ +VQ
Sbjct: 146 KALQNLIPNSN-KTDKASMLDEAIEYLKQLQLQVQ 179
>gi|297843750|ref|XP_002889756.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
gi|297335598|gb|EFH66015.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 70/133 (52%), Gaps = 18/133 (13%)
Query: 8 REEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQIL 67
R ED E++ +KEA + T +K ++++ H+++E+RRR +INE+ + L
Sbjct: 312 RHSEDVEEESGDGRKEAGPSRTGLGSKRSRSAEV-------HNLSERRRRDRINEKMRAL 364
Query: 68 REIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQN 127
+E+IP+ + K D AS L E IEY++ LQ +VQ ++ + P + P H+
Sbjct: 365 QELIPNCN-KVDKASMLDEAIEYLKSLQLQVQIMSMASGYYM--PPVMFPPGMGHY---- 417
Query: 128 FATQPHAIKNGSG 140
P A+ G G
Sbjct: 418 ----PAAMAMGMG 426
>gi|238008194|gb|ACR35132.1| unknown [Zea mays]
gi|413946840|gb|AFW79489.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 638
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 26/195 (13%)
Query: 10 EEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILRE 69
++D DDE + + S ++ K S A V H+++E+RRR +INE+ + L+E
Sbjct: 361 QDDDPDDE-------SGGMRRSCSRGAKRSRTAEV----HNLSERRRRDRINEKMRALQE 409
Query: 70 IIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFA 129
+IP+ + K D AS L E IEY++ LQ +VQ +S P L+P H ++ A
Sbjct: 410 LIPNCN-KIDKASMLDEAIEYLKTLQLQVQM--MSMGSGLCIPPMLLPPAMQHLQIPPAA 466
Query: 130 TQ-PHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACKPMDRQPEVA 188
PH + D NS + + + P P I P+ R
Sbjct: 467 AHFPHLGMGLGYGMGV----LDMNSAAAAAAAVPFPHMPGAHFPCPMIPGAPLPR----- 517
Query: 189 NKGISISMPLQGNLP 203
G+ I MP + +P
Sbjct: 518 --GLGIGMPARNTMP 530
>gi|342298426|emb|CBY05403.1| ALCATRAZ-like protein [Lepidium appelianum]
Length = 173
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 37 KNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQE 96
+NS K ++ H+++E+RRRSKINE+ + L+++IP+S+ K D AS L E IEY++ LQ
Sbjct: 85 RNSLKRNIDAQFHNLSEKRRRSKINEKMKALQKLIPNSN-KTDKASMLDEAIEYMKQLQL 143
Query: 97 KVQKYEV 103
+VQ V
Sbjct: 144 QVQTLAV 150
>gi|441433511|gb|AGC31677.1| basic helix loop helix [Solanum tuberosum]
Length = 689
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
H + E+RRR K+NERF ILR ++P K D AS L + IEYV+ L++KVQ E +D
Sbjct: 495 HVLAERRRREKLNERFIILRSLVPFVT-KMDKASILGDTIEYVKQLRKKVQDLEA--RDR 551
Query: 109 SAEPTK 114
AE TK
Sbjct: 552 HAETTK 557
>gi|15217533|ref|NP_172424.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|30681206|ref|NP_849626.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|20532207|sp|O80536.1|PIF3_ARATH RecName: Full=Transcription factor PIF3; AltName: Full=Basic
helix-loop-helix protein 8; Short=AtbHLH8; Short=bHLH 8;
AltName: Full=Phytochrome-associated protein 3; AltName:
Full=Phytochrome-interacting factor 3; AltName:
Full=Transcription factor EN 100; AltName: Full=bHLH
transcription factor bHLH008
gi|18026964|gb|AAL55715.1|AF251693_1 putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|3482928|gb|AAC33213.1| Unknown protein [Arabidopsis thaliana]
gi|3929586|gb|AAC95156.1| phytochrome interacting factor 3 [Arabidopsis thaliana]
gi|26449609|dbj|BAC41930.1| putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|332190336|gb|AEE28457.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|332190337|gb|AEE28458.1| transcription factor PIF3 [Arabidopsis thaliana]
Length = 524
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 64/113 (56%), Gaps = 9/113 (7%)
Query: 11 EDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREI 70
ED E++ +KEA + T +K ++++ H+++E+RRR +INE+ + L+E+
Sbjct: 317 EDVEEESGDGRKEAGPSRTGLGSKRSRSAEV-------HNLSERRRRDRINEKMRALQEL 369
Query: 71 IPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHW 123
IP+ + K D AS L E IEY++ LQ +VQ ++ + P + P H+
Sbjct: 370 IPNCN-KVDKASMLDEAIEYLKSLQLQVQIMSMA-SGYYLPPAVMFPPGMGHY 420
>gi|326528369|dbj|BAJ93366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
H+++E+RRR +INE+ + L+E+IPH + K D AS L E IEY++ LQ +VQ +
Sbjct: 320 HNLSERRRRDRINEKMRALQELIPHCN-KTDKASMLDEAIEYLKTLQMQVQMMWMG-GGM 377
Query: 109 SAEPTKLMP 117
+A P + P
Sbjct: 378 AAPPAVMFP 386
>gi|384246383|gb|EIE19873.1| hypothetical protein COCSUDRAFT_48716 [Coccomyxa subellipsoidea
C-169]
Length = 243
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%)
Query: 15 DDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHS 74
DD+ + A +T ++ +++ +S + KHS TE+RRR +I+E +LRE++
Sbjct: 29 DDQAAAASPAPGPVTQPSSARATSAEGSSRSKEKHSATEKRRRDRIHEGIVMLREVVVPQ 88
Query: 75 DQKRDTASFLLEVIEYVQYLQEKVQKY 101
+K D A+FL EY++ LQ +Q +
Sbjct: 89 KEKEDQAAFLRSAAEYIRQLQTALQCF 115
>gi|296089857|emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 5/127 (3%)
Query: 8 REEEDYEDDEFMSK--KEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQ 65
R+ D E+ E S+ +E + + S G K S H+++E+RRR +INE+ +
Sbjct: 288 RKCRDTEESECPSEDVEEESVGVRKSAPAKGGTGSKRSRAAEVHNLSERRRRDRINEKMR 347
Query: 66 ILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRV 125
L+E+IP+ + K D AS L E IEY++ LQ +VQ +S P ++P H
Sbjct: 348 ALQELIPNCN-KVDKASMLDEAIEYLKTLQLQVQI--MSMGTGLCMPPMMLPTGMQHIHA 404
Query: 126 QNFATQP 132
+ P
Sbjct: 405 AHMGHFP 411
>gi|125554209|gb|EAY99814.1| hypothetical protein OsI_21804 [Oryza sativa Indica Group]
Length = 315
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 20 SKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRD 79
S+ EAA+ K S A V H+++E+RRRSKINE+ + L+ +IP+S+ K D
Sbjct: 83 SEPEAAAGARPRGGSGSKRSRAAEV----HNLSEKRRRSKINEKMKALQSLIPNSN-KTD 137
Query: 80 TASFLLEVIEYVQYLQEKVQKYEV--------SYQDWSAEPTK 114
AS L E IEY++ LQ +VQ + SY + EP +
Sbjct: 138 KASMLDEAIEYLKQLQLQVQMLSMRNGVYLNPSYLSGALEPAQ 180
>gi|55296133|dbj|BAD67851.1| basic helix-loop-helix protein SPATULA-like [Oryza sativa Japonica
Group]
gi|125596157|gb|EAZ35937.1| hypothetical protein OsJ_20240 [Oryza sativa Japonica Group]
Length = 315
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 20 SKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRD 79
S+ EAA+ K S A V H+++E+RRRSKINE+ + L+ +IP+S+ K D
Sbjct: 83 SEPEAAAGARPRGGSGSKRSRAAEV----HNLSEKRRRSKINEKMKALQSLIPNSN-KTD 137
Query: 80 TASFLLEVIEYVQYLQEKVQKYEV--------SYQDWSAEPTK 114
AS L E IEY++ LQ +VQ + SY + EP +
Sbjct: 138 KASMLDEAIEYLKQLQLQVQMLSMRNGVYLNPSYLSGALEPAQ 180
>gi|342298442|emb|CBY05411.1| ALCATRAZ-like protein [Aethionema carneum]
Length = 224
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 8/97 (8%)
Query: 27 NITNSNAKDGKNSDKASVIRSK------HSVTEQRRRSKINERFQILREIIPHSDQKRDT 80
N TN+ G +KA R + H+++E+RRRSKINE+ + L+++IP+S+ K D
Sbjct: 81 NKTNNENALGNQRNKAVRTRQRSIDAKFHNLSEKRRRSKINEKMKALQKLIPNSN-KTDK 139
Query: 81 ASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMP 117
AS L E IEY++ LQ +VQ V P +L P
Sbjct: 140 ASMLDEAIEYLKQLQLQVQALAV-MNGLGLNPMRLPP 175
>gi|297805516|ref|XP_002870642.1| hypothetical protein ARALYDRAFT_493847 [Arabidopsis lyrata subsp.
lyrata]
gi|297316478|gb|EFH46901.1| hypothetical protein ARALYDRAFT_493847 [Arabidopsis lyrata subsp.
lyrata]
Length = 637
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H+V E++RR K+NERF ILR IIP S K D S L + IEY+Q L+ +VQ+ E
Sbjct: 442 HAVLEKKRREKLNERFMILRSIIP-SINKIDKVSILDDTIEYLQELERRVQELE 494
>gi|4093153|gb|AAC99771.1| phytochrome-associated protein 3 [Arabidopsis thaliana]
Length = 524
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 9/113 (7%)
Query: 11 EDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREI 70
ED E++ +KEA + T +K S + H+++E+RRR +INE+ + L+E+
Sbjct: 317 EDVEEESGDGRKEAGPSRTGLGSK-------RSRLAEVHNLSERRRRDRINEKMRALQEL 369
Query: 71 IPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHW 123
IP+ + K D AS L E IEY++ LQ +VQ ++ + P + P H+
Sbjct: 370 IPNCN-KVDKASMLDEAIEYLKSLQLQVQIMSMA-SGYYLPPAVMFPPGMGHY 420
>gi|295881692|gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunus persica]
Length = 386
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 36 GKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQ 95
G++S K S H+++E+RRRS+INE+ + L+ +IP+S+ K D AS L E IEY++ LQ
Sbjct: 150 GRSSSKRSRAAEVHNMSEKRRRSRINEKMKALQNLIPNSN-KTDKASMLDEAIEYLKQLQ 208
Query: 96 EKVQ 99
+VQ
Sbjct: 209 LQVQ 212
>gi|168024155|ref|XP_001764602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684180|gb|EDQ70584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 801
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 8/95 (8%)
Query: 9 EEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILR 68
+ ED ED+ +K++ A T K S A V H+ +E+RRR +INE+ + L+
Sbjct: 567 QSEDMEDESVDTKQKPA---TTGRVSTTKRSRAAEV----HNQSERRRRDRINEKMRALQ 619
Query: 69 EIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV 103
E+IP+S+ K D AS L E IEY++ LQ ++Q +
Sbjct: 620 ELIPNSN-KTDKASMLDEAIEYLKMLQLQLQMMSI 653
>gi|124360931|gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 484
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 62/101 (61%), Gaps = 12/101 (11%)
Query: 2 RTTKGNREEE-DY--EDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRS 58
R KG EE +Y ED +F S EA NI+ S+ K + ++ H+++E+RRR
Sbjct: 221 RKRKGIEAEEWEYQSEDVDFESA-EAKKNISGSSTKRSRAAEV-------HNLSERRRRD 272
Query: 59 KINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+INE+ + L+E+IP S+ K D AS L E I+Y++ LQ +VQ
Sbjct: 273 RINEKMKALQELIPRSN-KSDKASMLDEAIDYLKSLQLQVQ 312
>gi|218193849|gb|EEC76276.1| hypothetical protein OsI_13762 [Oryza sativa Indica Group]
Length = 505
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 59/94 (62%), Gaps = 7/94 (7%)
Query: 7 NREEEDYEDDEFMSKKEAASNITNSNAKDG-KNSDKASVIRSKHSVTEQRRRSKINERFQ 65
RE+ D ++ ++ EA +S+ + G K +A+ + H+++E+RRR +INE+ +
Sbjct: 303 GREDSDSRSED--AECEATEETKSSSRRYGSKRRTRAAEV---HNLSERRRRDRINEKMR 357
Query: 66 ILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
L+E+IPH + K D AS L E IEY++ LQ +VQ
Sbjct: 358 ALQELIPHCN-KTDKASILDEAIEYLKSLQMQVQ 390
>gi|222625912|gb|EEE60044.1| hypothetical protein OsJ_12829 [Oryza sativa Japonica Group]
Length = 489
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 59/94 (62%), Gaps = 7/94 (7%)
Query: 7 NREEEDYEDDEFMSKKEAASNITNSNAKDG-KNSDKASVIRSKHSVTEQRRRSKINERFQ 65
RE+ D ++ ++ EA +S+ + G K +A+ + H+++E+RRR +INE+ +
Sbjct: 287 GREDSDSRSED--AECEATEETKSSSRRYGSKRRTRAAEV---HNLSERRRRDRINEKMR 341
Query: 66 ILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
L+E+IPH + K D AS L E IEY++ LQ +VQ
Sbjct: 342 ALQELIPHCN-KTDKASILDEAIEYLKSLQMQVQ 374
>gi|218478035|dbj|BAH03388.1| bHLH transcriptional factor [Gentiana triflora]
gi|218478037|dbj|BAH03387.1| bHLH transcriptional factor [Gentiana triflora]
Length = 661
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 20 SKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRD 79
S+K + SN +S K G S + + + H ++E+RRR K+NERF LR ++P K D
Sbjct: 449 SQKPSTSNPASSIPKGG-TSQEVLIGGANHVLSERRRREKLNERFITLRSLVPFVT-KMD 506
Query: 80 TASFLLEVIEYVQYLQEKVQKYE 102
AS L + IEYV+ L++K+Q+ E
Sbjct: 507 KASVLGDTIEYVKQLRKKIQELE 529
>gi|449443257|ref|XP_004139396.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
gi|449523179|ref|XP_004168602.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
Length = 421
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
HS+ E+ RR +I ER + L+E++P+++ K D AS L E+I+YV++LQ +V+ VS
Sbjct: 228 HSIAERLRRERIAERMKALQELVPNAN-KTDKASMLDEIIDYVKFLQLQVKVLSVSRLGG 286
Query: 109 SAEPTKLMPWR 119
+ T MP R
Sbjct: 287 A---TAAMPSR 294
>gi|359487706|ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 8 REEEDYEDDEFMSK--KEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQ 65
R+ D E+ E S+ +E + + S G K S H+++E+RRR +INE+ +
Sbjct: 424 RKCRDTEESECPSEDVEEESVGVRKSAPAKGGTGSKRSRAAEVHNLSERRRRDRINEKMR 483
Query: 66 ILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
L+E+IP+ + K D AS L E IEY++ LQ +VQ
Sbjct: 484 ALQELIPNCN-KVDKASMLDEAIEYLKTLQLQVQ 516
>gi|15240202|ref|NP_201512.1| transcription factor ALC [Arabidopsis thaliana]
gi|75309083|sp|Q9FHA2.1|ALC_ARATH RecName: Full=Transcription factor ALC; AltName: Full=Basic
helix-loop-helix protein 73; Short=AtbHLH73; Short=bHLH
73; AltName: Full=Protein ALCATRAZ; AltName:
Full=Transcription factor EN 98; AltName: Full=bHLH
transcription factor bHLH073
gi|10177598|dbj|BAB10945.1| unnamed protein product [Arabidopsis thaliana]
gi|114050687|gb|ABI49493.1| At5g67110 [Arabidopsis thaliana]
gi|332010918|gb|AED98301.1| transcription factor ALC [Arabidopsis thaliana]
Length = 210
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 37 KNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQE 96
+NS K ++ H+++E++RRSKINE+ + L+++IP+S+ K D AS L E IEY++ LQ
Sbjct: 86 RNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSN-KTDKASMLDEAIEYLKQLQL 144
Query: 97 KVQKYEV 103
+VQ V
Sbjct: 145 QVQTLAV 151
>gi|356534971|ref|XP_003536024.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 665
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 67/125 (53%), Gaps = 7/125 (5%)
Query: 8 REEEDYEDDEFMSK---KEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERF 64
R+ +D +D E S+ +E+A + + G S K S H+++E++RR +INE+
Sbjct: 397 RKRKDTDDSECHSEDVEEESAGAKKTAGGRGGAGS-KRSRAAEVHNLSERKRRDRINEKM 455
Query: 65 QILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWR 124
+ L+E+IP+ + K D AS L E IEY++ LQ +VQ + + P ++P H
Sbjct: 456 RALQELIPNCN-KVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYM--PPMMLPAGMQHMH 512
Query: 125 VQNFA 129
+ A
Sbjct: 513 APHMA 517
>gi|401782370|dbj|BAM36702.1| bHLH transcriptional factor AN1 homolog [Rosa hybrid cultivar]
Length = 702
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 30 NSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIE 89
+S + G + D+ S + H + E+RRR K+NERF ILR ++P K D AS L + IE
Sbjct: 462 SSRLRKGTSQDELS---ANHVLAERRRREKLNERFIILRSLVPFV-TKMDKASILGDTIE 517
Query: 90 YVQYLQEKVQKYE 102
YV+ L++K+Q E
Sbjct: 518 YVKQLRKKIQDLE 530
>gi|21536863|gb|AAM61195.1| unknown [Arabidopsis thaliana]
Length = 210
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 37 KNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQE 96
+NS K ++ H+++E++RRSKINE+ + L+++IP+S+ K D AS L E IEY++ LQ
Sbjct: 86 RNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSN-KTDKASMLDEAIEYLKQLQL 144
Query: 97 KVQKYEV 103
+VQ V
Sbjct: 145 QVQTLAV 151
>gi|357128032|ref|XP_003565680.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor PIF3-like
[Brachypodium distachyon]
Length = 614
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
H+++E+RRR +INE+ + L+E+IP+ + K D AS L E IEY++ LQ +VQ +S
Sbjct: 410 HNLSERRRRDRINEKMRALQELIPNCN-KIDKASMLDEAIEYLKTLQLQVQM--MSMGTG 466
Query: 109 SAEPTKLMPWRNSHWRVQNFATQPH 133
P L+P H ++ A PH
Sbjct: 467 LCIPPMLLPPAMQHLQLSQMAHFPH 491
>gi|108711402|gb|ABF99197.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 421
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRR +INE+ + L+E+IPH + K D AS L E IEY++ LQ +VQ
Sbjct: 236 HNLSERRRRDRINEKMRALQELIPHCN-KTDKASILDEAIEYLKSLQMQVQ 285
>gi|147770956|emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 8 REEEDYEDDEFMSK--KEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQ 65
R+ D E+ E S+ +E + + S G K S H+++E+RRR +INE+ +
Sbjct: 409 RKCRDTEESECPSEDVEEESVGVRKSAPAKGGTGSKRSRAAEVHNLSERRRRDRINEKMR 468
Query: 66 ILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
L+E+IP+ + K D AS L E IEY++ LQ +VQ
Sbjct: 469 ALQELIPNCN-KVDKASMLDEAIEYLKTLQLQVQ 501
>gi|297803176|ref|XP_002869472.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
gi|297315308|gb|EFH45731.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
Length = 1780
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 21 KKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDT 80
++E + I + G S K S H++ E+RRR KINE+ + L+E+IP + K
Sbjct: 1549 REETIAGIQGTEEARGSTSRKRSRAAEMHNLAERRRREKINEKMKTLQELIPRCN-KSTK 1607
Query: 81 ASFLLEVIEYVQYLQEKVQKYEVSYQ 106
S L +VIEYV+ L+ ++Q Y ++++
Sbjct: 1608 VSTLEDVIEYVKSLEMQIQHYVMNFR 1633
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 9 EEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILR 68
E E ED + ++E I + G S K S H++ E+RRR KINE+ + L+
Sbjct: 1107 ETEIAEDRKQKEREETIVEIQGTEEARGSTSRKRSRAAEMHNLAERRRREKINEKMKTLQ 1166
Query: 69 EIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
E+IP + K S L +VIEY++ LQ ++Q
Sbjct: 1167 ELIPRCN-KSTKVSTLEDVIEYMKSLQMQIQ 1196
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 36 GKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQ 95
G S K S H++ E+RRR KINE+ + L+E+IP + K S L IEYV++LQ
Sbjct: 130 GSTSRKRSRAAEMHNLAERRRREKINEKMKTLQELIPRCN-KSTKVSTLDAAIEYVKWLQ 188
Query: 96 EKVQ 99
++Q
Sbjct: 189 SQIQ 192
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 28 ITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEV 87
I + G S K S H++ E+RRR KINE + L+E+IP + K S L +
Sbjct: 568 IQGTEEARGSMSRKRSRTAEMHNLAERRRREKINENIKTLQELIPRCN-KSTKVSTLDDA 626
Query: 88 IEYVQYLQEKVQ 99
IEYV++LQ ++Q
Sbjct: 627 IEYVKWLQSQIQ 638
>gi|332801231|gb|AEE99257.1| anthocyanin 1a [Nicotiana tabacum]
Length = 671
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQD 107
H + E+RRR K+NERF ILR ++P K D AS L + IEYV+ L++KVQ E +D
Sbjct: 476 HVLAERRRREKLNERFIILRSLVPFVT-KMDKASILGDTIEYVKQLRKKVQDLEARARD 533
>gi|115455729|ref|NP_001051465.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|108711401|gb|ABF99196.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108711403|gb|ABF99198.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549936|dbj|BAF13379.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|215740666|dbj|BAG97322.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 410
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 60/96 (62%), Gaps = 7/96 (7%)
Query: 5 KGNREEEDYEDDEFMSKKEAASNITNSNAKDG-KNSDKASVIRSKHSVTEQRRRSKINER 63
+ RE+ D ++ ++ EA +S+ + G K +A+ + H+++E+RRR +INE+
Sbjct: 185 RKGREDSDSRSED--AECEATEETKSSSRRYGSKRRTRAAEV---HNLSERRRRDRINEK 239
Query: 64 FQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+ L+E+IPH + K D AS L E IEY++ LQ +VQ
Sbjct: 240 MRALQELIPHCN-KTDKASILDEAIEYLKSLQMQVQ 274
>gi|336464506|gb|EGO52746.1| hypothetical protein NEUTE1DRAFT_91395 [Neurospora tetrasperma FGSC
2508]
Length = 420
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
++ HS+ E+RRRSK+NE F +L+ +IP + + L IEY++YL++ V K + +
Sbjct: 155 KTAHSLIERRRRSKMNEEFALLKSMIPACTGEMHKLAILQASIEYIRYLEDCVAKLQARH 214
Query: 106 QDWSAE 111
Q +E
Sbjct: 215 QSSPSE 220
>gi|449454115|ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
gi|449522990|ref|XP_004168508.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
Length = 696
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 8 REEEDYEDDEFMSK--KEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQ 65
R+ D ED E+ S +E +++ + G S K S H+++E+RRR +INE+ +
Sbjct: 425 RKCHDTEDSEWHSDDVEEDCNDVKRVTSARGAGS-KRSRAAEVHNLSERRRRDRINEKMR 483
Query: 66 ILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
L+E+IP+ + K D AS L E IEY++ LQ +VQ
Sbjct: 484 ALQELIPNCN-KVDKASMLDEAIEYLKTLQLQVQ 516
>gi|224066527|ref|XP_002302124.1| predicted protein [Populus trichocarpa]
gi|222843850|gb|EEE81397.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Query: 12 DYEDDEFMSK-KEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREI 70
D E+ E S+ E S + N AK S + S H+++E+RRR +INE+ + L+E+
Sbjct: 2 DAEESECQSEDAELDSAVANKPAKR-SGSTRRSRAAEVHNLSERRRRDRINEKMRALQEL 60
Query: 71 IPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
IPH + K D AS L E IEY++ LQ ++Q
Sbjct: 61 IPHCN-KTDKASMLDEAIEYLKSLQLQLQ 88
>gi|42567227|ref|NP_194608.3| transcription factor bHLH23 [Arabidopsis thaliana]
gi|75313939|sp|Q9SVU6.1|BH023_ARATH RecName: Full=Transcription factor bHLH23; AltName: Full=Basic
helix-loop-helix protein 23; Short=AtbHLH23; Short=bHLH
23; AltName: Full=Transcription factor EN 107; AltName:
Full=bHLH transcription factor bHLH023
gi|4218119|emb|CAA22973.1| putative protein [Arabidopsis thaliana]
gi|7269734|emb|CAB81467.1| putative protein [Arabidopsis thaliana]
gi|225898825|dbj|BAH30543.1| hypothetical protein [Arabidopsis thaliana]
gi|332660145|gb|AEE85545.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 413
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 16 DEFMSKKEAASNITNSNAKDGKNSDKASVIRSK--HSVTEQRRRSKINERFQILREIIPH 73
DE K +N+ N ++ ++S + R+ H ++E+RRR KINE + L+E++P
Sbjct: 247 DERKRKTREETNVENQGTEEARDSTSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPR 306
Query: 74 SDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
K D +S L +VIEYV+ LQ ++Q + + +
Sbjct: 307 CT-KTDRSSMLDDVIEYVKSLQSQIQMFSMGH 337
>gi|242038745|ref|XP_002466767.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
gi|241920621|gb|EER93765.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
Length = 535
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
H+++E+RRR +INE+ + L+E+IPH + K D AS L E IEY++ LQ +VQ +
Sbjct: 333 HNLSERRRRDRINEKMRALQELIPHCN-KTDKASMLDEAIEYLKSLQLQVQMMWMG-SGI 390
Query: 109 SAEPTKLMPWRNSHWRVQNFATQPHA 134
+A P + P + + P A
Sbjct: 391 AAPPAVMFPGVHQYLSRMGVGMGPAA 416
>gi|168043431|ref|XP_001774188.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674456|gb|EDQ60964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P+S+ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 42 HSIAERLRRERIAERMKALQELVPNSN-KTDKASMLDEIIDYVKFLQLQVKVLSMS 96
>gi|449468728|ref|XP_004152073.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 553
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 8 REEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQIL 67
R+ ++ +D +++ S + S G S K S H+++E+RRR +INE+ + L
Sbjct: 273 RKGKETDDSDYL----CYSTLKGSKQVRGSTSTKRSRAAEVHNLSERRRRDRINEKMKAL 328
Query: 68 REIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+E+IP + K D AS L E IEY++ LQ +VQ
Sbjct: 329 QELIPRCN-KADKASMLDEAIEYLKTLQLQVQ 359
>gi|329750801|gb|AEC03343.1| bHLH transcription factor MYC1 [Diospyros kaki]
Length = 719
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
Query: 29 TNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVI 88
+ S + G D+ S + H + E+RRR K+NERF ILR ++P K D AS L + I
Sbjct: 483 STSRFRKGTPQDELS---ANHVLAERRRREKLNERFIILRSLVPFVT-KMDKASILGDTI 538
Query: 89 EYVQYLQEKVQKYEVS 104
EYV+ L+ K+Q E S
Sbjct: 539 EYVKQLRSKIQDLEAS 554
>gi|357115750|ref|XP_003559649.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 445
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRR +INE+ + L+E+IPH + K D AS L E IEY++ LQ +VQ
Sbjct: 271 HNLSERRRRDRINEKMKALQELIPHCN-KTDKASMLDEAIEYLKTLQMQVQ 320
>gi|332801235|gb|AEE99259.1| anthocyanin 1-like protein [Nicotiana sylvestris]
Length = 671
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQD 107
H + E+RRR K+NERF ILR ++P K D AS L + IEYV+ L++KVQ E +D
Sbjct: 476 HVLAERRRREKLNERFIILRSLVPFVT-KMDKASILGDTIEYVKQLRKKVQDLEARARD 533
>gi|359484248|ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
Length = 536
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 8/83 (9%)
Query: 29 TNSNAKDGKNSDKASVIRSK-------HSVTEQRRRSKINERFQILREIIPHSDQKRDTA 81
T A G N +R++ HS+ E+ RR KI ER + L+E++P+S+ K D A
Sbjct: 280 TVGTASGGCNGTGKPRVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSN-KTDKA 338
Query: 82 SFLLEVIEYVQYLQEKVQKYEVS 104
S L E+IEYV++LQ +V+ +S
Sbjct: 339 SMLDEIIEYVKFLQLQVKVLSMS 361
>gi|357113061|ref|XP_003558323.1| PREDICTED: transcription factor PIF5-like [Brachypodium distachyon]
Length = 418
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 8/86 (9%)
Query: 14 EDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPH 73
ED EF + +E T S+ + G S + S H+ +E+RRR +INE+ + L+E+IPH
Sbjct: 212 EDAEFEATEE-----TKSSRRHG--SKRRSRAAEVHNQSERRRRDRINEKMRSLQELIPH 264
Query: 74 SDQKRDTASFLLEVIEYVQYLQEKVQ 99
+ K D AS L E IEY++ LQ ++Q
Sbjct: 265 CN-KADKASILDEAIEYLKSLQMQLQ 289
>gi|47232558|dbj|BAD18982.1| bHLH transcription activator Ivory seed [Ipomoea purpurea]
gi|125659425|dbj|BAF46858.1| bHLH transcription activator Ivory seed [Ipomoea purpurea]
Length = 665
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 18/86 (20%)
Query: 30 NSNAKDGKNSDKASVIRSK-------------HSVTEQRRRSKINERFQILREIIPHSDQ 76
NSN DG A+++ SK H + E+RRR K+NERF ILR ++P
Sbjct: 443 NSNGGDGA----ATILSSKLCKAAPQEEPNVNHVLAERRRREKLNERFIILRSLVPFVT- 497
Query: 77 KRDTASFLLEVIEYVQYLQEKVQKYE 102
K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 498 KMDKASILGDTIEYVKQLRRRIQELE 523
>gi|158515839|gb|ABW69687.1| anthocyanin synthesis regulatory protein [Ipomoea purpurea]
Length = 664
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 18/86 (20%)
Query: 30 NSNAKDGKNSDKASVIRSK-------------HSVTEQRRRSKINERFQILREIIPHSDQ 76
NSN DG A+++ SK H + E+RRR K+NERF ILR ++P
Sbjct: 442 NSNGGDGA----ATILSSKLCKAAPQEEPNVNHVLAERRRREKLNERFIILRSLVPFVT- 496
Query: 77 KRDTASFLLEVIEYVQYLQEKVQKYE 102
K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 497 KMDKASILGDTIEYVKQLRRRIQELE 522
>gi|125659430|dbj|BAF46859.1| bHLH transcription activator Ivory seed [Ipomoea purpurea]
Length = 664
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 18/86 (20%)
Query: 30 NSNAKDGKNSDKASVIRSK-------------HSVTEQRRRSKINERFQILREIIPHSDQ 76
NSN DG A+++ SK H + E+RRR K+NERF ILR ++P
Sbjct: 442 NSNGGDGA----ATILSSKLCKAAPQEEPNVNHVLAERRRREKLNERFIILRSLVPFVT- 496
Query: 77 KRDTASFLLEVIEYVQYLQEKVQKYE 102
K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 497 KMDKASILGDTIEYVKQLRRRIQELE 522
>gi|168048453|ref|XP_001776681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671973|gb|EDQ58517.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 233
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P+S+ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 43 HSIAERLRRERIAERMKALQELVPNSN-KTDKASMLDEIIDYVKFLQLQVKVLSMS 97
>gi|158515837|gb|ABW69686.1| anthocyanin synthesis regulatory protein [Ipomoea purpurea]
Length = 662
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 18/86 (20%)
Query: 30 NSNAKDGKNSDKASVIRSK-------------HSVTEQRRRSKINERFQILREIIPHSDQ 76
NSN DG A+++ SK H + E+RRR K+NERF ILR ++P
Sbjct: 440 NSNGGDGA----ATILSSKLCKAAPQEEPNVNHVLAERRRREKLNERFIILRSLVPFVT- 494
Query: 77 KRDTASFLLEVIEYVQYLQEKVQKYE 102
K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 495 KMDKASILGDTIEYVKQLRRRIQELE 520
>gi|242042934|ref|XP_002459338.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
gi|241922715|gb|EER95859.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
Length = 446
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 59/100 (59%), Gaps = 5/100 (5%)
Query: 5 KGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERF 64
K +R+E D ED + + E + + K +A+ + H+++E+RRR +INE+
Sbjct: 213 KRSRDEFD-EDADLDTVDETPPSSRDRRPASNKRRTRAAEV---HNMSERRRRDRINEKM 268
Query: 65 QILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
+ L+E++PH + K D AS L E IEY++ LQ +VQ +S
Sbjct: 269 RALQELVPHCN-KTDKASILDEAIEYLKSLQMQVQIMWMS 307
>gi|297738502|emb|CBI27747.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 19/125 (15%)
Query: 29 TNSNAKDGKNSDKASVIRSK-------HSVTEQRRRSKINERFQILREIIPHSDQKRDTA 81
T A G N +R++ HS+ E+ RR KI ER + L+E++P+S+ K D A
Sbjct: 133 TVGTASGGCNGTGKPRVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSN-KTDKA 191
Query: 82 SFLLEVIEYVQYLQEKVQKYEVS-----------YQDWSAEPTKLMPWRNSHWRVQNFAT 130
S L E+IEYV++LQ +V+ +S D AE +K + S + ++
Sbjct: 192 SMLDEIIEYVKFLQLQVKVLSMSRLGAAEAVVPLITDGQAEGSKGLSLSPSAGQAEDICQ 251
Query: 131 QPHAI 135
P I
Sbjct: 252 SPDQI 256
>gi|242037911|ref|XP_002466350.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
gi|241920204|gb|EER93348.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
Length = 424
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRR +INE+ + L+E+IPH + K D AS L E IEY++ LQ +VQ
Sbjct: 235 HNLSERRRRDRINEKMRALQELIPHCN-KTDKASILDETIEYLKSLQMQVQ 284
>gi|158515841|gb|ABW69688.1| anthocyanin synthesis regulatory protein [Ipomoea purpurea]
Length = 664
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 18/86 (20%)
Query: 30 NSNAKDGKNSDKASVIRSK-------------HSVTEQRRRSKINERFQILREIIPHSDQ 76
NSN DG A+++ SK H + E+RRR K+NERF ILR ++P
Sbjct: 443 NSNGGDGA----ATILSSKLCKAAPQEEPNVNHVLAERRRREKLNERFIILRSLVPFVT- 497
Query: 77 KRDTASFLLEVIEYVQYLQEKVQKYE 102
K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 498 KMDKASILGDTIEYVKQLRRRIQELE 523
>gi|357129887|ref|XP_003566591.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 448
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 5/86 (5%)
Query: 14 EDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPH 73
+DDE + + + + A+ K A V H+++E+RRR +INE+ + L+E+IP+
Sbjct: 243 QDDEDLDDEAGGLRRSAAGARSTKRGRTAEV----HNMSERRRRDRINEKMRALQELIPN 298
Query: 74 SDQKRDTASFLLEVIEYVQYLQEKVQ 99
+ K D AS L E IEY++ LQ +VQ
Sbjct: 299 CN-KIDKASMLEEAIEYLKTLQLQVQ 323
>gi|255559476|ref|XP_002520758.1| conserved hypothetical protein [Ricinus communis]
gi|223540143|gb|EEF41720.1| conserved hypothetical protein [Ricinus communis]
Length = 668
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 11/81 (13%)
Query: 32 NAKDGKNSDKASVIR----------SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTA 81
N+ +++D AS R + H + E+RRR K+NERF ILR ++P K D A
Sbjct: 454 NSPKSRDADAASRFRKATAAQEELSANHVLAERRRREKLNERFIILRSLVPFVT-KMDKA 512
Query: 82 SFLLEVIEYVQYLQEKVQKYE 102
S L + IEYV+ L++K+Q E
Sbjct: 513 SILGDTIEYVKQLRKKIQDLE 533
>gi|326523485|dbj|BAJ92913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 13/93 (13%)
Query: 7 NREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQI 66
++++ED +D+ A + S A+ K A V H+++E+RRR +INE+ +
Sbjct: 299 SQDDEDLDDE--------AGGLRRSAARSTKRGRTAEV----HNMSERRRRDRINEKMRA 346
Query: 67 LREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
L+E+IP+ + K D AS L E IEY++ LQ +VQ
Sbjct: 347 LQELIPNCN-KIDKASMLEEAIEYLKTLQLQVQ 378
>gi|108862947|gb|ABA99362.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 446
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 9/117 (7%)
Query: 14 EDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPH 73
ED EF S AA+ + + +A+ + H+++E+RRR +INE+ + L+E+IPH
Sbjct: 245 EDVEFES---AAATCSPAQKTTTAKRRRAAEV---HNLSERRRRDRINEKMKALQELIPH 298
Query: 74 SDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFAT 130
+ K D AS L E IEY++ LQ ++Q + A P + P H +Q
Sbjct: 299 CN-KTDKASMLDEAIEYLKSLQLQLQMMWMG--GGMAPPAVMFPAAGVHQYMQRMGA 352
>gi|326525038|dbj|BAK07789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 13/93 (13%)
Query: 7 NREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQI 66
++++ED +D+ A + S A+ K A V H+++E+RRR +INE+ +
Sbjct: 303 SQDDEDLDDE--------AGGLRRSAARSTKRGRTAEV----HNMSERRRRDRINEKMRA 350
Query: 67 LREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
L+E+IP+ + K D AS L E IEY++ LQ +VQ
Sbjct: 351 LQELIPNCN-KIDKASMLEEAIEYLKTLQLQVQ 382
>gi|326500148|dbj|BAJ90909.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 13/93 (13%)
Query: 7 NREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQI 66
++++ED +D+ A + S A+ K A V H+++E+RRR +INE+ +
Sbjct: 299 SQDDEDLDDE--------AGGLRRSAARSTKRGRTAEV----HNMSERRRRDRINEKMRA 346
Query: 67 LREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
L+E+IP+ + K D AS L E IEY++ LQ +VQ
Sbjct: 347 LQELIPNCN-KIDKASMLEEAIEYLKTLQLQVQ 378
>gi|242086827|ref|XP_002439246.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
gi|241944531|gb|EES17676.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
Length = 480
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 55/90 (61%), Gaps = 13/90 (14%)
Query: 10 EEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILRE 69
+ED +D+ +++ AA + K S A V H+++E+RRR +INE+ + L+E
Sbjct: 239 DEDMDDEPGATRRSAA--------RSAKRSRTAEV----HNMSERRRRDRINEKMRALQE 286
Query: 70 IIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+IP+ + K D AS L E IEY++ LQ +VQ
Sbjct: 287 LIPNCN-KIDKASMLEEAIEYLKTLQLQVQ 315
>gi|326492944|dbj|BAJ90328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRR +INE+ + L+E+IPH + K D AS L E IEY++ LQ +VQ
Sbjct: 41 HNLSERRRRDRINEKMRALQELIPHCN-KTDKASMLDEAIEYLKTLQMQVQ 90
>gi|225446765|ref|XP_002278399.1| PREDICTED: transcription factor PIF5-like [Vitis vinifera]
Length = 531
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 5 KGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERF 64
KG EE E + AA N + + + S A V H+++E+RRR +INE+
Sbjct: 303 KGREAEESECQSEAAEHESAARNKASQRSGSTRRSRAAEV----HNLSERRRRDRINEKM 358
Query: 65 QILREIIPHSDQKRDTASFLLEVIEYVQ 92
+ L+E+IPHS+ K D AS L E IEY++
Sbjct: 359 KALQELIPHSN-KSDKASMLDEAIEYLK 385
>gi|115489518|ref|NP_001067246.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|77556567|gb|ABA99363.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108862946|gb|ABA99364.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649753|dbj|BAF30265.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|125537356|gb|EAY83844.1| hypothetical protein OsI_39060 [Oryza sativa Indica Group]
gi|215694924|dbj|BAG90115.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 9/117 (7%)
Query: 14 EDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPH 73
ED EF S AA+ + + +A+ + H+++E+RRR +INE+ + L+E+IPH
Sbjct: 245 EDVEFES---AAATCSPAQKTTTAKRRRAAEV---HNLSERRRRDRINEKMKALQELIPH 298
Query: 74 SDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRVQNFAT 130
+ K D AS L E IEY++ LQ ++Q + A P + P H +Q
Sbjct: 299 CN-KTDKASMLDEAIEYLKSLQLQLQMMWMG--GGMAPPAVMFPAAGVHQYMQRMGA 352
>gi|297840129|ref|XP_002887946.1| hypothetical protein ARALYDRAFT_474990 [Arabidopsis lyrata subsp.
lyrata]
gi|297333787|gb|EFH64205.1| hypothetical protein ARALYDRAFT_474990 [Arabidopsis lyrata subsp.
lyrata]
Length = 596
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H+++E++RR K+NERF LR IIP S K D S L + IEY+Q LQ++VQ+ E
Sbjct: 406 HALSEKKRREKLNERFMTLRSIIP-SISKIDKVSILDDTIEYLQELQKRVQELE 458
>gi|451953538|dbj|BAM84238.1| bHLH transcription factor [Dahlia pinnata]
Length = 652
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 18 FMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQK 77
F+ + I++S A + + + H + E+RRR K+NERF ILR ++P K
Sbjct: 450 FLYPTATTTTISDSIASRLGKTTSHEELSANHVLAERRRREKLNERFIILRTLVPLV-TK 508
Query: 78 RDTASFLLEVIEYVQYLQEKVQKYE 102
D AS L + IEYV+ L+ KVQ E
Sbjct: 509 MDKASILGDTIEYVKQLRNKVQDLE 533
>gi|224068580|ref|XP_002326150.1| predicted protein [Populus trichocarpa]
gi|222833343|gb|EEE71820.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR KI ER + L+E++P+S+ K D AS L E+IEYV++LQ +V+ +S
Sbjct: 251 HSIAERLRREKIAERMKNLQELVPNSN-KVDKASMLDEIIEYVKFLQLQVKVLSMS 305
>gi|356536767|ref|XP_003536906.1| PREDICTED: transcription factor TT8-like [Glycine max]
Length = 654
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 45 IRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ + H + E+RRR K+NERF ILR ++P K D AS L + IEYV+ L+ K+Q+ E
Sbjct: 460 LSANHVLAERRRREKLNERFIILRSLVPFVT-KMDKASILGDTIEYVKQLRRKIQELE 516
>gi|222630134|gb|EEE62266.1| hypothetical protein OsJ_17053 [Oryza sativa Japonica Group]
Length = 404
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Query: 16 DEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSD 75
DE E A S A+ K S A V H+++E+RRR +INE+ + L+E+IP+ +
Sbjct: 190 DELDLDDELAGVHRRSAARSSKRSRTAEV----HNLSERRRRDRINEKMRALQELIPNCN 245
Query: 76 QKRDTASFLLEVIEYVQYLQEKVQ 99
K D AS L E IEY++ LQ +VQ
Sbjct: 246 -KIDKASMLEEAIEYLKTLQLQVQ 268
>gi|224143968|ref|XP_002325140.1| predicted protein [Populus trichocarpa]
gi|222866574|gb|EEF03705.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
HS+ E+ RR +I ER + L+E++P+++ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 48 HSIAERLRRERIAERMKALQELVPNAN-KTDKASMLDEIIDYVKFLQLQVKVLSMSRLGG 106
Query: 109 SAEPTKLM 116
+A L+
Sbjct: 107 AAAVAPLV 114
>gi|147836162|emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]
Length = 486
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
HS+ E+ RR +I ER + L+E++P+++ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 271 HSIAERLRRERIAERMKALQELVPNAN-KTDKASMLDEIIDYVKFLQLQVKVLSMSRLGG 329
Query: 109 SAEPTKLM 116
+A L+
Sbjct: 330 AAAVAPLV 337
>gi|332801233|gb|AEE99258.1| anthocyanin 1b [Nicotiana tabacum]
Length = 683
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H + E+RRR K+NERF ILR ++P K D AS L + IEYV+ L +KVQ E
Sbjct: 487 HVLAERRRREKLNERFIILRSLVPFVT-KMDKASILGDTIEYVKQLHKKVQDLE 539
>gi|302143504|emb|CBI22065.3| unnamed protein product [Vitis vinifera]
Length = 544
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 5 KGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERF 64
KG EE E + AA N + + + S A V H+++E+RRR +INE+
Sbjct: 303 KGREAEESECQSEAAEHESAARNKASQRSGSTRRSRAAEV----HNLSERRRRDRINEKM 358
Query: 65 QILREIIPHSDQKRDTASFLLEVIEYVQ 92
+ L+E+IPHS+ K D AS L E IEY++
Sbjct: 359 KALQELIPHSN-KSDKASMLDEAIEYLK 385
>gi|332801237|gb|AEE99260.1| anthocyanin 1-like protein [Nicotiana tomentosiformis]
Length = 683
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H + E+RRR K+NERF ILR ++P K D AS L + IEYV+ L +KVQ E
Sbjct: 487 HVLAERRRREKLNERFIILRSLVPFVT-KMDKASILGDTIEYVKQLHKKVQDLE 539
>gi|224994136|dbj|BAH28881.1| bHLH transcription factor LjTT8 [Lotus japonicus]
Length = 678
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NERF ILR ++P K D AS L + IEYV+ L+ K+Q+ E
Sbjct: 471 ANHVLAERRRREKLNERFIILRSLVPFVT-KMDKASILGDTIEYVKQLRRKIQELE 525
>gi|356502813|ref|XP_003520210.1| PREDICTED: transcription factor TT8-like [Glycine max]
Length = 646
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 45 IRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ + H + E+RRR K+NERF ILR ++P K D AS L + IEYV+ L+ K+Q+ E
Sbjct: 452 LSANHVLAERRRREKLNERFIILRSLVPFVT-KMDKASILGDTIEYVKQLRRKIQELE 508
>gi|15222504|ref|NP_176552.1| transcription factor EGL1 [Arabidopsis thaliana]
gi|42571979|ref|NP_974080.1| transcription factor EGL1 [Arabidopsis thaliana]
gi|334183608|ref|NP_001185302.1| transcription factor EGL1 [Arabidopsis thaliana]
gi|34222624|sp|Q9CAD0.1|EGL1_ARATH RecName: Full=Transcription factor EGL1; AltName: Full=Basic
helix-loop-helix protein 2; Short=AtMYC146;
Short=AtbHLH2; Short=bHLH 2; AltName: Full=Protein
ENHANCER OF GLABRA 3; AltName: Full=Transcription factor
EN 30; AltName: Full=bHLH transcription factor bHLH002
gi|12324939|gb|AAG52418.1|AC011622_6 putative transcription factor; 68971-66046 [Arabidopsis thaliana]
gi|18026952|gb|AAL55709.1|AF251687_1 putative transcription factor BHLH2 [Arabidopsis thaliana]
gi|225898046|dbj|BAH30355.1| hypothetical protein [Arabidopsis thaliana]
gi|332196003|gb|AEE34124.1| transcription factor EGL1 [Arabidopsis thaliana]
gi|332196004|gb|AEE34125.1| transcription factor EGL1 [Arabidopsis thaliana]
gi|332196005|gb|AEE34126.1| transcription factor EGL1 [Arabidopsis thaliana]
Length = 596
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H+++E++RR K+NERF LR IIP S K D S L + IEY+Q LQ++VQ+ E
Sbjct: 406 HALSEKKRREKLNERFMTLRSIIP-SISKIDKVSILDDTIEYLQDLQKRVQELE 458
>gi|2335192|gb|AAB72192.1| bHLH protein [Arabidopsis thaliana]
Length = 597
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H+++E++RR K+NERF LR IIP S K D S L + IEY+Q LQ++VQ+ E
Sbjct: 407 HALSEKKRREKLNERFMTLRSIIP-SISKIDKVSILDDTIEYLQDLQKRVQELE 459
>gi|108710019|gb|ABF97814.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 481
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRR +INE+ + L+E+IPH + K D AS L E IEY++ LQ ++Q
Sbjct: 323 HNLSERRRRDRINEKMRALQELIPHCN-KTDKASMLDEAIEYLKSLQLQLQ 372
>gi|414873163|tpg|DAA51720.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 523
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRR +INE+ + L+E+IPH + K D AS L E IEY++ LQ +VQ
Sbjct: 329 HNLSERRRRDRINEKMRALQELIPHCN-KTDKASILDETIEYLKSLQMQVQ 378
>gi|47232560|dbj|BAD18983.1| bHLH transcription activator Ivory seed [Ipomoea tricolor]
gi|47232562|dbj|BAD18984.1| bHLH transcription activator Ivory seed [Ipomoea tricolor]
Length = 670
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
H + E+RRR K+NERF ILR ++P K D AS L + IEYV+ L+ +VQ+ E +
Sbjct: 473 HVLAERRRREKLNERFIILRSLVPFVT-KMDKASILGDTIEYVKQLRRRVQELEAA 527
>gi|23495742|dbj|BAC19953.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
gi|24059945|dbj|BAC21408.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
Length = 417
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRR +INE+ + L+E++PH + K D AS L E IEY++ LQ +VQ
Sbjct: 233 HNLSERRRRDRINEKLRALQELVPHCN-KTDKASILDEAIEYLKSLQMQVQ 282
>gi|359480799|ref|XP_002277966.2| PREDICTED: uncharacterized protein LOC100245665 [Vitis vinifera]
gi|296082405|emb|CBI21410.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Query: 9 EEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILR 68
+E D E +E + EA + A ++S K S H+++E+RRRS+INE+ + L+
Sbjct: 107 DEYDCESEEGL---EALVEEVATKAAPLRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQ 163
Query: 69 EIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+IP+S+ K D AS L E IEY++ LQ +VQ
Sbjct: 164 NLIPNSN-KTDKASMLDEAIEYLKQLQLQVQ 193
>gi|115461987|ref|NP_001054593.1| Os05g0139100 [Oryza sativa Japonica Group]
gi|50511445|gb|AAT77368.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51854388|gb|AAU10768.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578144|dbj|BAF16507.1| Os05g0139100 [Oryza sativa Japonica Group]
Length = 505
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 10 EEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILRE 69
E DE E A S A+ K S A V H+++E+RRR +INE+ + L+E
Sbjct: 305 EWSASQDELDLDDELAGVHRRSAARSSKRSRTAEV----HNLSERRRRDRINEKMRALQE 360
Query: 70 IIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+IP+ + K D AS L E IEY++ LQ +VQ
Sbjct: 361 LIPNCN-KIDKASMLEEAIEYLKTLQLQVQ 389
>gi|22327493|ref|NP_680372.1| transcription factor GLABRA 3 [Arabidopsis thaliana]
gi|75309232|sp|Q9FN69.1|GL3_ARATH RecName: Full=Transcription factor GLABRA 3; AltName: Full=Basic
helix-loop-helix protein 1; Short=AtMYC6; Short=AtbHLH1;
Short=bHLH 1; AltName: Full=Protein SHAPESHIFTER;
AltName: Full=Transcription factor EN 31; AltName:
Full=bHLH transcription factor bHLH001
gi|9758040|dbj|BAB08503.1| bHLH transcription factor-like protein [Arabidopsis thaliana]
gi|17224395|gb|AAL36964.1| bHLH-transcription factor [Arabidopsis thaliana]
gi|332007281|gb|AED94664.1| transcription factor GLABRA 3 [Arabidopsis thaliana]
Length = 637
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H+V E++RR K+NERF LR+IIP S K D S L + IEY+Q L+ +VQ+ E
Sbjct: 442 HAVLEKKRREKLNERFMTLRKIIP-SINKIDKVSILDDTIEYLQELERRVQELE 494
>gi|10998404|gb|AAG25927.1|AF260918_1 anthocyanin 1 [Petunia x hybrida]
gi|10998406|gb|AAG25928.1|AF260919_1 anthocyanin 1 [Petunia x hybrida]
Length = 668
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H + E+RRR K+NERF ILR ++P K D AS L + IEYV+ L++KVQ E
Sbjct: 476 HVLAERRRREKLNERFIILRSLVPFVT-KMDKASILGDTIEYVKQLRKKVQDLE 528
>gi|378924999|dbj|BAL63287.1| basic helix-loop-helix protein APG [Oryza sativa Japonica Group]
Length = 432
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Query: 16 DEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSD 75
DE E A S A+ K S A V H+++E+RRR +INE+ + L+E+IP+ +
Sbjct: 311 DELDLDDELAGVHRRSAARSSKRSRTAEV----HNLSERRRRDRINEKMRALQELIPNCN 366
Query: 76 QKRDTASFLLEVIEYVQYLQEKVQ 99
K D AS L E IEY++ LQ +VQ
Sbjct: 367 -KIDKASMLEEAIEYLKTLQLQVQ 389
>gi|367020172|ref|XP_003659371.1| hypothetical protein MYCTH_2136960 [Myceliophthora thermophila ATCC
42464]
gi|347006638|gb|AEO54126.1| hypothetical protein MYCTH_2136960 [Myceliophthora thermophila ATCC
42464]
Length = 403
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV 103
++ HS+ E+RRRSK+NE F +L+ +IP + + L IEYV+YL++ V K +
Sbjct: 145 KTAHSIIERRRRSKMNEEFAVLKSLIPACTGEMHKLAILQAAIEYVRYLEDCVAKLKA 202
>gi|108710018|gb|ABF97813.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 485
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRR +INE+ + L+E+IPH + K D AS L E IEY++ LQ ++Q
Sbjct: 323 HNLSERRRRDRINEKMRALQELIPHCN-KTDKASMLDEAIEYLKSLQLQLQ 372
>gi|324022722|gb|ADY15317.1| transparent testa 8 [Prunus avium]
Length = 565
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 45 IRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV 103
+ + H + E+RRR K+NERF ILR ++P K D AS L + IEYV+ L++K+Q E
Sbjct: 417 LSANHVLAERRRREKLNERFIILRSLVPFV-TKMDKASILGDTIEYVKQLRKKIQDLEA 474
>gi|116785394|gb|ABK23705.1| unknown [Picea sitchensis]
Length = 333
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 15/99 (15%)
Query: 36 GKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQ 95
G +S K S H+++E+RRR++INE+ + L+ +IP+S+ K D AS L E IEY++ LQ
Sbjct: 148 GTSSSKRSRAAEVHNLSEKRRRNRINEKMKALQNLIPNSN-KTDKASMLDEAIEYLKKLQ 206
Query: 96 EKVQKY------EVSYQDWSAEPTKLMPWRNSHWRVQNF 128
+VQ ++S W A+ MP H ++Q
Sbjct: 207 LQVQMLSARSGIDISSMRWLAQ----MP----HLQIQQM 237
>gi|218196060|gb|EEC78487.1| hypothetical protein OsI_18387 [Oryza sativa Indica Group]
Length = 289
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Query: 16 DEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSD 75
DE E A S A+ K S A V H+++E+RRR +INE+ + L+E+IP+ +
Sbjct: 95 DELDLDDELAGVHRRSAARSSKRSRTAEV----HNLSERRRRDRINEKMRALQELIPNCN 150
Query: 76 QKRDTASFLLEVIEYVQYLQEKVQ 99
K D AS L E IEY++ LQ +VQ
Sbjct: 151 -KIDKASMLEEAIEYLKTLQLQVQ 173
>gi|218187227|gb|EEC69654.1| hypothetical protein OsI_39066 [Oryza sativa Indica Group]
Length = 469
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 53/86 (61%), Gaps = 7/86 (8%)
Query: 14 EDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPH 73
ED EF S AA+ + + +A+ + H+++E+RRR +INE+ + L+E+IPH
Sbjct: 254 EDVEFES---AAATCSPAQKTTTAKRRRAAEV---HNLSERRRRDRINEKMKALQELIPH 307
Query: 74 SDQKRDTASFLLEVIEYVQYLQEKVQ 99
+ K D AS L E IEY++ LQ ++Q
Sbjct: 308 CN-KTDKASMLDEAIEYLKSLQLQLQ 332
>gi|356509797|ref|XP_003523632.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 376
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 37/51 (72%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L+E++P D+K A L E+I YVQ LQ++V+
Sbjct: 242 HSLAERVRREKISERMRLLQELVPGCDKKTGKAVMLDEIINYVQSLQQQVE 292
>gi|219363643|ref|NP_001136510.1| uncharacterized protein LOC100216625 [Zea mays]
gi|194688606|gb|ACF78387.1| unknown [Zea mays]
gi|223949339|gb|ACN28753.1| unknown [Zea mays]
gi|413939377|gb|AFW73928.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 280
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 5/64 (7%)
Query: 36 GKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQ 95
GK S A V H+++E+RRRS+INE+ + L+ +IP+S K D AS L + IEY+++LQ
Sbjct: 41 GKRSRAAEV----HNLSEKRRRSRINEKMKALQTLIPNSS-KTDKASMLDDAIEYLKHLQ 95
Query: 96 EKVQ 99
+VQ
Sbjct: 96 LQVQ 99
>gi|302922398|ref|XP_003053457.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734398|gb|EEU47744.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 409
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
++ HS+ E+RRRSK+NE F +L+ +IP S L IEY++YL++ V K +
Sbjct: 181 KTAHSLIERRRRSKMNEEFAVLKNMIPACTGDMHKLSILQASIEYIRYLEDCVSKLKAQQ 240
Query: 106 QDWSA 110
++ SA
Sbjct: 241 EEESA 245
>gi|225436998|ref|XP_002277508.1| PREDICTED: transcription factor TT8 [Vitis vinifera]
Length = 696
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 45 IRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ + H + E+RRR K+NERF ILR ++P K D AS L + IEYV+ L++K+Q E
Sbjct: 486 LSANHVLAERRRREKLNERFIILRSLVPFVT-KMDKASILGDTIEYVKQLRKKIQDLE 542
>gi|297743632|emb|CBI36515.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
HS+ E+ RR +I ER + L+E++P+++ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 115 HSIAERLRRERIAERMKALQELVPNAN-KTDKASMLDEIIDYVKFLQLQVKVLSMSRLGG 173
Query: 109 SAEPTKLM 116
+A L+
Sbjct: 174 AAAVAPLV 181
>gi|125545009|gb|EAY91148.1| hypothetical protein OsI_12756 [Oryza sativa Indica Group]
Length = 469
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRR +INE+ + L+E+IPH + K D AS L E IEY++ LQ ++Q
Sbjct: 304 HNLSERRRRDRINEKMRALQELIPHCN-KTDKASMLDEAIEYLKSLQLQLQ 353
>gi|338192055|gb|AEI84807.1| bHLH transcription factor [Malus x domestica]
Length = 709
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 45 IRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ + H + E+RRR K+NERF ILR ++P K D AS L + IEYV+ L+ K+Q E
Sbjct: 477 LSANHVLAERRRREKLNERFIILRSLVPFVT-KMDKASILGDTIEYVKQLRNKIQDLE 533
>gi|413939376|gb|AFW73927.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 279
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 5/64 (7%)
Query: 36 GKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQ 95
GK S A V H+++E+RRRS+INE+ + L+ +IP+S K D AS L + IEY+++LQ
Sbjct: 41 GKRSRAAEV----HNLSEKRRRSRINEKMKALQTLIPNSS-KTDKASMLDDAIEYLKHLQ 95
Query: 96 EKVQ 99
+VQ
Sbjct: 96 LQVQ 99
>gi|184161316|gb|ACC68685.1| bHLH-like DNA binding protein [Vitis vinifera]
Length = 701
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 45 IRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ + H + E+RRR K+NERF ILR ++P K D AS L + IEYV+ L++K+Q E
Sbjct: 491 LSANHVLAERRRREKLNERFIILRSLVPFVT-KMDKASILGDTIEYVKQLRKKIQDLE 547
>gi|147772652|emb|CAN62848.1| hypothetical protein VITISV_010152 [Vitis vinifera]
Length = 668
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 45 IRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ + H + E+RRR K+NERF ILR ++P K D AS L + IEYV+ L++K+Q E
Sbjct: 458 LSANHVLAERRRREKLNERFIILRSLVPFVT-KMDKASILGDTIEYVKQLRKKIQDLE 514
>gi|293333026|ref|NP_001168271.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|194707870|gb|ACF88019.1| unknown [Zea mays]
gi|223947139|gb|ACN27653.1| unknown [Zea mays]
gi|414879034|tpg|DAA56165.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414879035|tpg|DAA56166.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 460
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 92/225 (40%), Gaps = 50/225 (22%)
Query: 2 RTTKGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASV----------IRSK--- 48
+ K E E++ K A SN N K GK D AS +R++
Sbjct: 201 KRCKSAEESNGAEENSGKGKAAAQSNSDNGGKKQGK--DGASKPPEPPKDYIHVRARRGE 258
Query: 49 ----HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR KI++R ++L++++P ++ A L E+I YVQ LQ +V+ +
Sbjct: 259 ATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMK 318
Query: 105 YQ------DWSAEPTKL--------MPWRNSHWRVQNFATQPHAIKNGSGP--GSMFPGK 148
D++ P L P +NSH+ ++ + P N P G P
Sbjct: 319 LATVNPQLDFNNLPNLLPKDMHQSCGPLQNSHFPLET-SGAPLPYLNQGNPLIGCGLPNG 377
Query: 149 FDDNSISMSPTMLTSTQTPVESDPNRDIACKPMDRQPEVANKGIS 193
D++ SM P DP C+PM Q G+S
Sbjct: 378 MDNSQSSMHPL-----------DP---AFCRPMSSQQHPFLNGVS 408
>gi|414868827|tpg|DAA47384.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 339
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 33 AKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQ 92
A G S + S H++TE+RRR KINERF+ L++I+P K + AS L + I Y++
Sbjct: 168 APAGGGSSRRSHHGEAHNLTEKRRRHKINERFKTLQQIVPGC-SKSNQASTLDQTIHYMK 226
Query: 93 YLQEKVQ 99
LQ +VQ
Sbjct: 227 SLQHQVQ 233
>gi|218199079|gb|EEC81506.1| hypothetical protein OsI_24867 [Oryza sativa Indica Group]
Length = 593
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRR +INE+ + L+E++PH + K D AS L E IEY++ LQ +VQ
Sbjct: 409 HNLSERRRRDRINEKLRALQELVPHCN-KTDKASILDEAIEYLKSLQMQVQ 458
>gi|195639614|gb|ACG39275.1| hypothetical protein [Zea mays]
Length = 282
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 5/64 (7%)
Query: 36 GKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQ 95
GK S A V H+++E+RRRS+INE+ + L+ +IP+S K D AS L + IEY+++LQ
Sbjct: 43 GKRSRAAEV----HNLSEKRRRSRINEKMKALQTLIPNSS-KTDKASMLDDAIEYLKHLQ 97
Query: 96 EKVQ 99
+VQ
Sbjct: 98 LQVQ 101
>gi|296086734|emb|CBI32369.3| unnamed protein product [Vitis vinifera]
Length = 620
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 45 IRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ + H + E+RRR K+NERF ILR ++P K D AS L + IEYV+ L++K+Q E
Sbjct: 410 LSANHVLAERRRREKLNERFIILRSLVPFVT-KMDKASILGDTIEYVKQLRKKIQDLE 466
>gi|302398605|gb|ADL36597.1| BHLH domain class transcription factor [Malus x domestica]
Length = 709
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 45 IRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ + H + E+RRR K+NERF ILR ++P K D AS L + IEYV+ L+ K+Q E
Sbjct: 477 LSANHVLAERRRREKLNERFIILRSLVPFV-TKMDKASILGDTIEYVKQLRNKIQDLE 533
>gi|359744468|gb|AEV57494.1| rice phytochrome-interacting factor 4 [Oryza sativa Japonica Group]
Length = 414
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRR +INE+ + L+E++PH + K D AS L E IEY++ LQ +VQ
Sbjct: 230 HNLSERRRRDRINEKLRALQELVPHCN-KTDKASILDEAIEYLKSLQMQVQ 279
>gi|322696901|gb|EFY88687.1| HLH transcription factor, putative [Metarhizium acridum CQMa 102]
Length = 396
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
++ HS+ E+RRRSK+NE F +L+ +IP + + L I+YV+YL++ V K + +
Sbjct: 180 KTAHSLIERRRRSKMNEEFAVLKSMIPACTGEMHKLAILQASIDYVRYLEDCVAKLKAQH 239
Query: 106 QDWSAEPTKLMPWRNSHWRVQNFATQPHAIKNG 138
+ S E RN +++F HA +G
Sbjct: 240 GEKSRE----QAARNPLPSIRDFHPTFHADPSG 268
>gi|449457905|ref|XP_004146688.1| PREDICTED: uncharacterized protein LOC101211609 [Cucumis sativus]
gi|449529094|ref|XP_004171536.1| PREDICTED: uncharacterized protein LOC101228749 [Cucumis sativus]
Length = 422
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
HS+ E+ RR +I ER + L+E++P+++ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 215 HSIAERLRRERIAERMKALQELVPNAN-KTDKASMLDEIIDYVKFLQLQVKVLSMSRLGG 273
Query: 109 SAEPTKLM 116
+A L+
Sbjct: 274 AAAVAPLV 281
>gi|449443927|ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 529
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 36 GKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQ 95
G S K S H+++E+RRR +INE+ + L+E+IP + K D AS L E IEY++ LQ
Sbjct: 308 GSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCN-KTDKASMLDEAIEYLKTLQ 366
Query: 96 EKVQ 99
+VQ
Sbjct: 367 LQVQ 370
>gi|226502090|ref|NP_001146660.1| uncharacterized protein LOC100280260 [Zea mays]
gi|219888217|gb|ACL54483.1| unknown [Zea mays]
gi|414868921|tpg|DAA47478.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 397
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRR +INE+ + L+E+IPH + K D AS L E IEY++ LQ ++Q
Sbjct: 256 HNLSERRRRDRINEKMKALQELIPHCN-KADKASMLDEAIEYLKSLQLQLQ 305
>gi|327194899|gb|AEA34965.1| putative transcription factor BHLH2 [Ipomoea batatas]
Length = 667
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
+ H + E+RRR K+NERF ILR ++P K D AS L + IEYV+ L+ ++Q+ E +
Sbjct: 471 ANHVLAERRRREKLNERFIILRSLVPFVT-KMDKASILGDTIEYVKQLRRRIQELEAA 527
>gi|222636419|gb|EEE66551.1| hypothetical protein OsJ_23063 [Oryza sativa Japonica Group]
Length = 517
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRR +INE+ + L+E++PH + K D AS L E IEY++ LQ +VQ
Sbjct: 333 HNLSERRRRDRINEKLRALQELVPHCN-KTDKASILDEAIEYLKSLQMQVQ 382
>gi|163311836|gb|ABY26931.1| putative anthocyanin transcriptional regulator [Ipomoea quamoclit]
Length = 659
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
+ H + E+RRR K+NERF ILR ++P K D AS L + IEYV+ L+ ++Q+ E +
Sbjct: 460 ANHVLAERRRREKLNERFIILRSLVPFVT-KMDKASILGDTIEYVKQLRRRIQELEAT 516
>gi|148909440|gb|ABR17818.1| unknown [Picea sitchensis]
Length = 757
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
H + E+RRR K+NE+F +LR ++P K D AS L + IEY++ LQ +V++ E S +
Sbjct: 528 HVLAERRRREKLNEKFIVLRSLVPFV-TKMDKASILGDAIEYLKQLQRRVEELEASSKVM 586
Query: 109 SAEPTK 114
AE K
Sbjct: 587 EAEMRK 592
>gi|384252625|gb|EIE26101.1| hypothetical protein COCSUDRAFT_46492 [Coccomyxa subellipsoidea
C-169]
Length = 336
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 33 AKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQ 92
AK + A+ +H TEQRRR +IN+ F+ LRE++P + +K D A+FL+ + Y++
Sbjct: 42 AKMARTESGAARSTLRHIETEQRRRDRINDGFKALRELLP-TTEKMDKANFLMACVSYIR 100
Query: 93 YLQEKVQKYEV 103
LQ +Q+ V
Sbjct: 101 QLQAVMQQLLV 111
>gi|163311838|gb|ABY26932.1| putative anthocyanin transcriptional regulator [Ipomoea coccinea]
Length = 661
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
+ H + E+RRR K+NERF ILR ++P K D AS L + IEYV+ L+ ++Q+ E +
Sbjct: 462 ANHVLAERRRREKLNERFIILRSLVPFVT-KMDKASILGDTIEYVKQLRRRIQELEAA 518
>gi|392513513|emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]
Length = 445
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 12/90 (13%)
Query: 10 EEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILRE 69
EE E E MSK + + T K S A V H+++E+RRRS+INE+ + L+
Sbjct: 161 EEGQEPSEEMSKPAPSRSST-------KRSRAAEV----HNLSEKRRRSRINEKMKALQN 209
Query: 70 IIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+IP+S+ K D AS L E IEY++ LQ +VQ
Sbjct: 210 LIPNSN-KTDKASMLDEAIEYLKQLQLQVQ 238
>gi|163311834|gb|ABY26930.1| putative anthocyanin transcriptional regulator [Ipomoea alba]
Length = 671
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
H + E+RRR K+NERF ILR ++P K D AS L + IEYV+ L+ ++Q+ E +
Sbjct: 474 HVLAERRRREKLNERFIILRSLVPFVT-KMDKASILGDTIEYVKQLRRRIQELEAA 528
>gi|218195357|gb|EEC77784.1| hypothetical protein OsI_16953 [Oryza sativa Indica Group]
Length = 553
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 24 AASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASF 83
A + + N ++ + + S I++ H ++E+RRR K+NE F IL+ ++P S K D AS
Sbjct: 358 AGAWMNNGDSSAAAMTTQGSSIKN-HVMSERRRREKLNEMFLILKSVVP-SIHKVDKASI 415
Query: 84 LLEVIEYVQYLQEKVQKYEVSYQ 106
L E I Y++ L+++V++ E S Q
Sbjct: 416 LAETIAYLKELEKRVEELESSSQ 438
>gi|163311848|gb|ABY26937.1| putative anthocyanin transcriptional regulator [Ipomoea
hochstetteri]
Length = 683
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
+ H + E+RRR K+NERF ILR ++P K D AS L + IEYV+ L+ ++Q+ E +
Sbjct: 484 ANHVLAERRRREKLNERFIILRSLVPFVT-KMDKASILGDTIEYVKQLRRRIQELEAA 540
>gi|302809450|ref|XP_002986418.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
gi|300145954|gb|EFJ12627.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
Length = 355
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR KI ER + L+E++P+++ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 147 HSIAERLRREKIAERMKALQELVPNAN-KTDKASMLDEIIDYVKFLQLQVKVLSMS 201
>gi|414589493|tpg|DAA40064.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 471
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
HS+ E+ RR +I ER + L+E++P+++ K D AS L E+++YV++LQ +V+ +S
Sbjct: 251 HSIAERLRRERIAERMKALQELVPNAN-KTDKASMLDEIVDYVKFLQLQVKVLSMSRLGG 309
Query: 109 SAEPTKLMPWRNSHWR 124
+A L+ +S R
Sbjct: 310 AAAVAPLVADMSSEGR 325
>gi|226496023|ref|NP_001141950.1| uncharacterized protein LOC100274099 [Zea mays]
gi|223945379|gb|ACN26773.1| unknown [Zea mays]
gi|414589494|tpg|DAA40065.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 470
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
HS+ E+ RR +I ER + L+E++P+++ K D AS L E+++YV++LQ +V+ +S
Sbjct: 250 HSIAERLRRERIAERMKALQELVPNAN-KTDKASMLDEIVDYVKFLQLQVKVLSMSRLGG 308
Query: 109 SAEPTKLMPWRNSHWR 124
+A L+ +S R
Sbjct: 309 AAAVAPLVADMSSEGR 324
>gi|222080623|gb|ACM41588.1| bHLH transcription factor MYC5 [Catharanthus roseus]
Length = 321
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 37 KNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQE 96
+N K S H+++E+RRRS+INE+ + L+ +IP+S+ K D AS L E IEY++ LQ
Sbjct: 139 RNPSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSN-KTDKASMLDEAIEYLKQLQL 197
Query: 97 KVQ 99
+VQ
Sbjct: 198 QVQ 200
>gi|449515805|ref|XP_004164938.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 549
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 36 GKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQ 95
G S K S H+++E+RRR +INE+ + L+E+IP + K D AS L E IEY++ LQ
Sbjct: 293 GSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCN-KADKASMLDEAIEYLKTLQ 351
Query: 96 EKVQ 99
+VQ
Sbjct: 352 LQVQ 355
>gi|168023762|ref|XP_001764406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684270|gb|EDQ70673.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1015
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 9 EEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILR 68
+ ED ED+ +K + IT K S A V H+ +E+RRR +INE+ + L+
Sbjct: 706 QSEDGEDESVDTKHKP---ITTGRGSTTKRSRAAEV----HNQSERRRRDRINEKMRALQ 758
Query: 69 EIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV 103
E+IP+S+ K D AS L E I+Y++ LQ ++Q +
Sbjct: 759 ELIPNSN-KTDKASMLDEAIDYLKILQLQLQMMSI 792
>gi|451953544|dbj|BAM84241.1| bHLH transcription factor [Dahlia pinnata]
Length = 658
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 28 ITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEV 87
I++S A + + + + H + E+RRR K+NERF ILR ++P K D AS L +
Sbjct: 466 ISDSIASRLRKTTSHEELSANHVLAERRRREKLNERFIILRTLVPLV-TKMDKASILGDT 524
Query: 88 IEYVQYLQEKVQKYE 102
IEYV+ L+ KVQ E
Sbjct: 525 IEYVKQLRNKVQDLE 539
>gi|326487850|dbj|BAJ89764.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508951|dbj|BAJ86868.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+ +E+RRR +INE+ + L+E+IPH + K D AS L E IEY++ LQ +VQ
Sbjct: 211 HNQSERRRRDRINEKMRSLQELIPHCN-KADKASILDEAIEYLKSLQMQVQ 260
>gi|15242922|ref|NP_200609.1| transcription factor bHLH82 [Arabidopsis thaliana]
gi|75311535|sp|Q9LSQ3.1|BH082_ARATH RecName: Full=Transcription factor bHLH82; AltName: Full=Basic
helix-loop-helix protein 82; Short=AtbHLH82; Short=bHLH
82; AltName: Full=Transcription factor EN 96; AltName:
Full=bHLH transcription factor bHLH082
gi|8885595|dbj|BAA97525.1| unnamed protein product [Arabidopsis thaliana]
gi|332009604|gb|AED96987.1| transcription factor bHLH82 [Arabidopsis thaliana]
Length = 297
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P+++ K D AS L E+IEYV++LQ +V+ +S
Sbjct: 110 HSIAERLRRERIAERMKSLQELVPNTN-KTDKASMLDEIIEYVRFLQLQVKVLSMS 164
>gi|297796719|ref|XP_002866244.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312079|gb|EFH42503.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P+++ K D AS L E+IEYV++LQ +V+ +S
Sbjct: 110 HSIAERLRRERIAERMKSLQELVPNTN-KTDKASMLDEIIEYVRFLQLQVKVLSMS 164
>gi|399145795|gb|AFP25102.1| ICE1 [Camellia sinensis]
Length = 518
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 12 DYEDDEFM--------SKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINER 63
+Y+ DEFM K S+ NS G K + +K+ + E+RRR K+N+R
Sbjct: 288 NYDSDEFMENNKVEESGKNGGNSSNANSTVTGGDQKGKKRGLPAKNLMAERRRRKKLNDR 347
Query: 64 FQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+LR ++P K D AS L + IEY++ L +K++
Sbjct: 348 LYMLRSVVPKI-SKMDRASILGDAIEYLKELLQKIK 382
>gi|449531452|ref|XP_004172700.1| PREDICTED: uncharacterized protein LOC101229339 [Cucumis sativus]
Length = 379
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 37 KNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQE 96
+NS K S H+++E+RRR +INE+ + L+ +IP+S+ K D AS L E IEY++ LQ
Sbjct: 189 RNSSKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSN-KTDKASMLDEAIEYLKQLQL 247
Query: 97 KVQ 99
+VQ
Sbjct: 248 QVQ 250
>gi|163311840|gb|ABY26933.1| putative anthocyanin transcriptional regulator [Ipomoea trifida]
Length = 676
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
+ H + E+RRR K+NERF ILR ++P K D AS L + IEYV+ L+ ++Q+ E +
Sbjct: 480 ANHVLAERRRREKLNERFIILRSLVPFVT-KMDKASILGDTIEYVKQLRRRIQELEAA 536
>gi|451953542|dbj|BAM84240.1| bHLH transcription factor [Dahlia pinnata]
Length = 649
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 28 ITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEV 87
I++S A + + + + H + E+RRR K+NERF ILR ++P K D AS L +
Sbjct: 457 ISDSIASRLRKTTSHEELSANHVLAERRRREKLNERFIILRTLVPLV-TKMDKASILGDT 515
Query: 88 IEYVQYLQEKVQKYE 102
IEYV+ L+ KVQ E
Sbjct: 516 IEYVKQLRNKVQDLE 530
>gi|317016596|gb|ACT90640.2| inducer of CBF expression [Camellia sinensis]
Length = 518
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 12 DYEDDEFM--------SKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINER 63
+Y+ DEFM K S+ NS G K + +K+ + E+RRR K+N+R
Sbjct: 288 NYDSDEFMENNKVEESGKNGGNSSNANSTVTGGDQKGKKRGLPAKNLMAERRRRKKLNDR 347
Query: 64 FQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+LR ++P K D AS L + IEY++ L +K++
Sbjct: 348 LYMLRSVVPKI-SKMDRASILGDAIEYLKELLQKIK 382
>gi|312222653|dbj|BAJ33515.1| bHLH transcriptional factor [Dahlia pinnata]
gi|312222663|dbj|BAJ33520.1| bHLH transcriptional factor [Dahlia pinnata]
Length = 649
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 28 ITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEV 87
I++S A + + + + H + E+RRR K+NERF ILR ++P K D AS L +
Sbjct: 457 ISDSIASRLRKTTSHEELSANHVLAERRRREKLNERFIILRTLVPLV-TKMDKASILGDT 515
Query: 88 IEYVQYLQEKVQKYE 102
IEYV+ L+ KVQ E
Sbjct: 516 IEYVKQLRNKVQDLE 530
>gi|255565001|ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
gi|223537200|gb|EEF38832.1| conserved hypothetical protein [Ricinus communis]
Length = 474
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
HS+ E+ RR +I ER + L+E++P+++ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 267 HSIAERLRRERIAERMKALQELVPNAN-KTDKASMLDEIIDYVKFLQLQVKVLSMSRLGG 325
Query: 109 SAEPTKLM 116
+A L+
Sbjct: 326 AAAVAPLV 333
>gi|212720610|ref|NP_001131794.1| uncharacterized protein LOC100193167 [Zea mays]
gi|194692562|gb|ACF80365.1| unknown [Zea mays]
gi|413953032|gb|AFW85681.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRRSKINE+ + L+ +IP+S+ K D AS L E IEY++ LQ +VQ
Sbjct: 110 HNLSEKRRRSKINEKMKALQSLIPNSN-KTDKASMLDEAIEYLKQLQLQVQ 159
>gi|357137415|ref|XP_003570296.1| PREDICTED: uncharacterized protein LOC100827783 [Brachypodium
distachyon]
Length = 351
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P S K D AS L E+I+YV++LQ +V+ +S
Sbjct: 155 HSIAERLRRERIAERMKALQELVP-SANKTDKASMLDEIIDYVKFLQVQVKVLSMS 209
>gi|357118625|ref|XP_003561052.1| PREDICTED: uncharacterized protein LOC100821164 [Brachypodium
distachyon]
Length = 331
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 9/87 (10%)
Query: 36 GKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQ 95
G + K + H+++E+RRRS+INE+ + L+ +IP+S+ K D AS L E IEY++ LQ
Sbjct: 98 GGSGSKRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSN-KTDKASMLDEAIEYLKQLQ 156
Query: 96 EKVQKYEV--------SYQDWSAEPTK 114
+VQ + SY + EP +
Sbjct: 157 LQVQMLSMRNGVYLNPSYLSGALEPMQ 183
>gi|20127072|gb|AAM10955.1|AF488599_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 350
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
HS+ E+ RR +I ER + L+E++P+ + K D AS L E+I+YV++LQ +V+ +S
Sbjct: 149 HSIAERLRRERIAERMKALQELVPNGN-KTDKASMLDEIIDYVEFLQLQVKVLSMSRLGG 207
Query: 109 SA 110
+A
Sbjct: 208 AA 209
>gi|242063376|ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
gi|241932808|gb|EES05953.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
Length = 393
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P+++ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 206 HSIAERLRRERIAERMKALQELVPNAN-KTDKASMLDEIIDYVKFLQLQVKVLSMS 260
>gi|42573075|ref|NP_974634.1| transcription factor bHLH23 [Arabidopsis thaliana]
gi|332660144|gb|AEE85544.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 340
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Query: 16 DEFMSKKEAASNITNSNAKDGKNSDKASVIRSK--HSVTEQRRRSKINERFQILREIIPH 73
DE K +N+ N ++ ++S + R+ H ++E+RRR KINE + L+E++P
Sbjct: 247 DERKRKTREETNVENQGTEEARDSTSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPR 306
Query: 74 SDQKRDTASFLLEVIEYVQYLQEKVQ 99
K D +S L +VIEYV+ LQ ++Q
Sbjct: 307 CT-KTDRSSMLDDVIEYVKSLQSQIQ 331
>gi|163311842|gb|ABY26934.1| putative anthocyanin transcriptional regulator [Ipomoea lacunosa]
Length = 669
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
H + E+RRR K+NERF ILR ++P K D AS L + IEYV+ L+ ++Q+ E +
Sbjct: 475 HVLAERRRREKLNERFIILRSLVPFVT-KMDKASILGDTIEYVKQLRRRIQELEAA 529
>gi|300827231|gb|ADK36627.1| Rc protein [Oryza meridionalis]
Length = 672
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Query: 32 NAKDGKNSDKASVIR----SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEV 87
K + K S I+ + H + E+RRR K+NE+F ILR ++P K D AS L +
Sbjct: 471 GGKGASGTRKVSAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDT 529
Query: 88 IEYVQYLQEKVQKYEVS 104
IEYV+ L+ ++Q+ E S
Sbjct: 530 IEYVKQLRNRIQELESS 546
>gi|326533782|dbj|BAK05422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 362
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P S K D AS L E+I+YV++LQ +V+ +S
Sbjct: 175 HSIAERLRRERIAERMKALQELVP-SANKTDKASMLDEIIDYVKFLQLQVKVLSMS 229
>gi|242068603|ref|XP_002449578.1| hypothetical protein SORBIDRAFT_05g019530 [Sorghum bicolor]
gi|241935421|gb|EES08566.1| hypothetical protein SORBIDRAFT_05g019530 [Sorghum bicolor]
Length = 520
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 7 NREEED---YEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINER 63
N + ED ED E K++ +N T + G K + +K+ + E+RRR K+N+R
Sbjct: 287 NYDSEDARGVEDSEKKDGKDSNANSTVTGGSTGDGKGKRKGLPAKNLMAERRRRKKLNDR 346
Query: 64 FQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKV 98
+LR ++P K D AS L + IEY++ L +K+
Sbjct: 347 LYMLRSVVPKI-SKMDRASILGDAIEYLKELLQKI 380
>gi|451953540|dbj|BAM84239.1| bHLH transcription factor [Dahlia pinnata]
Length = 651
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 45 IRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ + H + E+RRR K+NERF ILR ++P K D AS L + IEYV+ L+ KVQ E
Sbjct: 476 LSANHVLAERRRREKLNERFIILRTLVPLV-TKMDKASILGDTIEYVKQLRNKVQDLE 532
>gi|357118504|ref|XP_003560994.1| PREDICTED: transcription factor bHLH66-like [Brachypodium
distachyon]
Length = 388
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P+++ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 194 HSIAERLRRERIAERMKSLQELVPNAN-KTDKASMLDEIIDYVKFLQLQVKVLSMS 248
>gi|326505558|dbj|BAJ95450.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+ +E+RRR +INE+ + L+E+IPH + K D AS L E IEY++ LQ +VQ
Sbjct: 202 HNQSERRRRDRINEKMRSLQELIPHCN-KADKASILDEAIEYLKSLQMQVQ 251
>gi|224066515|ref|XP_002302118.1| predicted protein [Populus trichocarpa]
gi|222843844|gb|EEE81391.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 45 IRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ + H + E+RRR K+NERF ILR ++P K D AS L + IEYV+ L +K+Q E
Sbjct: 457 LSANHVLAERRRREKLNERFIILRSLVPFV-TKMDKASILGDTIEYVKQLLKKIQDLE 513
>gi|255550301|ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
gi|223544687|gb|EEF46203.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
Length = 592
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR KI ER + L+E++P+S K D AS L E+IEYV++LQ +V+ +S
Sbjct: 362 HSIAERLRREKIAERMKNLQELVPNS-SKVDKASMLDEIIEYVKFLQLQVKVLSMS 416
>gi|97974133|dbj|BAE94394.1| bHLH transcriptional factor [Ipomoea nil]
Length = 669
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H + E+RRR K+NERF ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 476 HVLAERRRREKLNERFIILRSLVPFVT-KMDKASILGDTIEYVKQLRRRIQELE 528
>gi|226492543|ref|NP_001151181.1| LOC100284814 [Zea mays]
gi|195644858|gb|ACG41897.1| BHLH transcription factor [Zea mays]
Length = 390
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P+++ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 199 HSIAERLRRERIAERMKALQELVPNAN-KTDKASMLDEIIDYVKFLQLQVKVLSMS 253
>gi|356556714|ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 475
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
HS+ E+ RR +I ER + L+E++P+++ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 264 HSIAERLRRERIAERMKALQELVPNAN-KTDKASMLDEIIDYVKFLQLQVKVLSMSRLGG 322
Query: 109 SAEPTKLM 116
+A L+
Sbjct: 323 AAAVAPLV 330
>gi|356536868|ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 491
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 36 GKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQ 95
G S K S H+++E+RRR +INE+ + L+E+IP + K D AS L E IEY++ LQ
Sbjct: 268 GSTSTKRSHAAEVHNLSERRRRDRINEKMKALQELIPRCN-KSDKASMLDEAIEYLKSLQ 326
Query: 96 EKVQ 99
+VQ
Sbjct: 327 LQVQ 330
>gi|242092116|ref|XP_002436548.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
gi|241914771|gb|EER87915.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
Length = 291
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRRSKINE+ + L+ +IP+S+ K D AS L E IEY++ LQ +VQ
Sbjct: 88 HNLSEKRRRSKINEKMKALQSLIPNSN-KTDKASMLDEAIEYLKQLQLQVQ 137
>gi|51970922|dbj|BAD44153.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
Length = 350
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
HS+ E+ RR +I ER + L+E++P+ + K D AS L E+I+YV++LQ +V+ +S
Sbjct: 149 HSIAERLRRERIAERMKALQELVPNGN-KTDKASMLDEIIDYVKFLQLQVKVLSMSRLGG 207
Query: 109 SA 110
+A
Sbjct: 208 AA 209
>gi|225458663|ref|XP_002284880.1| PREDICTED: transcription factor SPATULA [Vitis vinifera]
gi|302142294|emb|CBI19497.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 9/75 (12%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS---- 104
H+++E+RRRS+INE+ + L+ +IP+S+ K D AS L E IEY++ LQ +VQ +
Sbjct: 192 HNLSEKRRRSRINEKMKALQNLIPNSN-KTDKASMLDEAIEYLKQLQLQVQMLTMRNGLS 250
Query: 105 ----YQDWSAEPTKL 115
Y + +PT+L
Sbjct: 251 LHPIYLPGALQPTQL 265
>gi|15224109|ref|NP_180003.1| transcription factor bHLH66 [Arabidopsis thaliana]
gi|75315918|sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic
helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH
66; AltName: Full=Transcription factor EN 95; AltName:
Full=bHLH transcription factor bHLH066
gi|4115386|gb|AAD03387.1| unknown protein [Arabidopsis thaliana]
gi|51970882|dbj|BAD44133.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
gi|111074492|gb|ABH04619.1| At2g24260 [Arabidopsis thaliana]
gi|330252457|gb|AEC07551.1| transcription factor bHLH66 [Arabidopsis thaliana]
Length = 350
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
HS+ E+ RR +I ER + L+E++P+ + K D AS L E+I+YV++LQ +V+ +S
Sbjct: 149 HSIAERLRRERIAERMKALQELVPNGN-KTDKASMLDEIIDYVKFLQLQVKVLSMSRLGG 207
Query: 109 SA 110
+A
Sbjct: 208 AA 209
>gi|62734583|gb|AAX96692.1| Helix-loop-helix DNA-binding domain, putative [Oryza sativa
Japonica Group]
gi|77549727|gb|ABA92524.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 458
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 19 MSKKEAASNITNSNAKDGK----NSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHS 74
+ KK A N DG +D+ S I++ H ++E+RRR K+ E F IL+ ++P S
Sbjct: 212 LLKKAVAGAGAWMNNADGSAATMTTDQGSSIKN-HVMSERRRREKLKEMFLILKSVVP-S 269
Query: 75 DQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQ 106
K D AS L E I Y++ L+++V++ E S Q
Sbjct: 270 IHKVDKASILAETIAYLKELEKRVEELESSSQ 301
>gi|413937342|gb|AFW71893.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 489
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR KI++R + L+E++P+S+ + D AS L E+IEYV++LQ +V+ +S
Sbjct: 309 HSIAERLRREKISDRMKNLQELVPNSN-RTDKASMLDEIIEYVKFLQLQVKVLSMS 363
>gi|218194467|gb|EEC76894.1| hypothetical protein OsI_15110 [Oryza sativa Indica Group]
Length = 458
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 19 MSKKEAASNITNSNAKDGK----NSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHS 74
+ KK A N DG +D+ S I++ H ++E+RRR K+ E F IL+ ++P S
Sbjct: 212 LLKKAVAGAGAWMNNADGSAATMTTDQGSSIKN-HVMSERRRREKLKEMFLILKSVVP-S 269
Query: 75 DQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQ 106
K D AS L E I Y++ L+++V++ E S Q
Sbjct: 270 IHKVDKASILAETIAYLKELEKRVEELESSSQ 301
>gi|116180386|ref|XP_001220042.1| hypothetical protein CHGG_00821 [Chaetomium globosum CBS 148.51]
gi|88185118|gb|EAQ92586.1| hypothetical protein CHGG_00821 [Chaetomium globosum CBS 148.51]
Length = 385
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV 103
++ HS+ E+RRRSK+NE F +L+ +IP + + L IEYV+YL++ V K +
Sbjct: 145 KTAHSLIERRRRSKMNEEFAVLKGLIPACTGEMHKLAILQASIEYVRYLEDCVTKLKA 202
>gi|408399693|gb|EKJ78787.1| hypothetical protein FPSE_01025 [Fusarium pseudograminearum CS3096]
Length = 404
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
++ HS+ E+RRRSK+NE F +L+ +IP S L IEY++YL++ V K +
Sbjct: 179 KTAHSLIERRRRSKMNEEFAVLKGMIPACTGDMHKLSILQASIEYIRYLEDCVSKLKAQQ 238
Query: 106 QD 107
+D
Sbjct: 239 ED 240
>gi|295913203|gb|ADG57860.1| transcription factor [Lycoris longituba]
Length = 204
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
HS+ E+ RR +I ER + L+E++P+++ K D AS L E+I YV++LQ +V+ +S
Sbjct: 41 HSIAERLRRERIAERMKALQELVPNAN-KTDKASMLDEIIGYVKFLQLQVKVLSMSRLGG 99
Query: 109 SAEPTKLMPWRNSHWRVQNFAT 130
+A L+ +S R N T
Sbjct: 100 AAAVAPLVADISSEVRNGNNGT 121
>gi|326514040|dbj|BAJ92170.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRR +INE+ + L+E++PH + K D AS L E IEY++ LQ ++Q
Sbjct: 242 HNLSERRRRDRINEKMRALQELVPHCN-KTDKASMLDEAIEYLKSLQLQLQ 291
>gi|302801892|ref|XP_002982702.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
gi|300149801|gb|EFJ16455.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
Length = 443
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P+S+ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 270 HSIAERLRRERIAERMKSLQELVPNSN-KTDKASMLDEIIDYVKFLQLQVKVLSMS 324
>gi|389642593|ref|XP_003718929.1| hypothetical protein MGG_00190 [Magnaporthe oryzae 70-15]
gi|351641482|gb|EHA49345.1| hypothetical protein MGG_00190 [Magnaporthe oryzae 70-15]
gi|440464784|gb|ELQ34152.1| hypothetical protein OOU_Y34scaffold00793g34 [Magnaporthe oryzae
Y34]
gi|440489172|gb|ELQ68847.1| hypothetical protein OOW_P131scaffold00214g8 [Magnaporthe oryzae
P131]
Length = 484
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
++ HS+ E+RRRSK+NE F L+ +IP + + L I+Y++YL++ V K +
Sbjct: 198 KTAHSLIERRRRSKMNEEFATLKNMIPACTGEMHKLAILQASIDYIRYLEDCVSKLQAQR 257
Query: 106 QDWSAEPTKLMP 117
+D S P +L P
Sbjct: 258 EDQS-TPMELAP 268
>gi|224069945|ref|XP_002303090.1| predicted protein [Populus trichocarpa]
gi|222844816|gb|EEE82363.1| predicted protein [Populus trichocarpa]
Length = 615
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 36 GKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQ 95
G S K S H+++E+RRR +INE+ + L+E+IP + K D AS L E IEY++ LQ
Sbjct: 359 GSMSSKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCN-KSDKASMLDEAIEYLKSLQ 417
Query: 96 EKVQ 99
+VQ
Sbjct: 418 LQVQ 421
>gi|413920949|gb|AFW60881.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 518
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 7 NREEEDYEDDEFMSKKE-----AASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKIN 61
N + ED E KK+ A S +T DGK K + +K+ + E+RRR K+N
Sbjct: 284 NYDSEDARGVEDSGKKDGKDSNANSTVTGGATGDGKGKRKG--LPAKNLMAERRRRKKLN 341
Query: 62 ERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKV 98
+R +LR ++P K D AS L + IEY++ L +K+
Sbjct: 342 DRLYMLRSVVPKI-SKMDRASILGDAIEYLKELLQKI 377
>gi|449448502|ref|XP_004142005.1| PREDICTED: uncharacterized protein LOC101217594 [Cucumis sativus]
Length = 406
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 37 KNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQE 96
++S K S H+++E+RRRS+INE+ + L+ +IP+S+ K D AS L E IEY++ LQ
Sbjct: 167 RSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSN-KTDKASMLDEAIEYLKQLQL 225
Query: 97 KVQ 99
+VQ
Sbjct: 226 QVQ 228
>gi|371534690|gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
Length = 713
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 9 EEEDYEDD---EFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQ 65
E E + DD E+M K+ ++ K S A V H+++E+RRR +INE+ +
Sbjct: 425 ESECHSDDVEEEYMGVKKG----DHARGMGSKRSRAAEV----HNLSERRRRDRINEKMR 476
Query: 66 ILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
L+E+IP+ + K D AS L E IEY++ LQ +VQ
Sbjct: 477 ALQELIPNCN-KVDKASMLDEAIEYLKTLQLQVQ 509
>gi|357119131|ref|XP_003561299.1| PREDICTED: transcription factor TT8-like [Brachypodium distachyon]
Length = 780
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 34 KDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQY 93
+ G +A+ + + H + E++RR K+NERF ILR ++P K D AS L + IEYV+
Sbjct: 456 RGGGPRREAADLSANHVLQERKRREKLNERFIILRSLVPFVT-KMDKASILGDTIEYVKQ 514
Query: 94 LQEKVQKYEVS 104
L+ ++Q E S
Sbjct: 515 LRSRIQDLESS 525
>gi|356530637|ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 452
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
HS+ E+ RR +I ER + L+E++P+++ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 236 HSIAERLRRERIAERMKALQELVPNAN-KTDKASMLDEIIDYVKFLQLQVKVLSMSRLGG 294
Query: 109 SAEPTKLM 116
+A L+
Sbjct: 295 AAAVAPLV 302
>gi|226530189|ref|NP_001145523.1| uncharacterized protein LOC100278938 [Zea mays]
gi|195657423|gb|ACG48179.1| hypothetical protein [Zea mays]
Length = 460
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 91/225 (40%), Gaps = 50/225 (22%)
Query: 2 RTTKGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASV----------IRSK--- 48
+ K E E++ K A SN N K GK D AS R++
Sbjct: 201 KRCKSAEESNGAEENSGKGKAAAQSNSDNGGKKQGK--DGASKPPEPPKDYIHFRARRGE 258
Query: 49 ----HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR KI++R ++L++++P ++ A L E+I YVQ LQ +V+ +
Sbjct: 259 ATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMK 318
Query: 105 YQ------DWSAEPTKL--------MPWRNSHWRVQNFATQPHAIKNGSGP--GSMFPGK 148
D++ P L P +NSH+ ++ + P N P G P
Sbjct: 319 LATVNPQLDFNNLPNLLPKDMHQSCGPLQNSHFPLET-SGAPLPYLNQGNPLIGCGLPNG 377
Query: 149 FDDNSISMSPTMLTSTQTPVESDPNRDIACKPMDRQPEVANKGIS 193
D++ SM P DP C+PM Q G+S
Sbjct: 378 MDNSQSSMHPL-----------DP---AFCRPMSSQQHPFLNGVS 408
>gi|242043350|ref|XP_002459546.1| hypothetical protein SORBIDRAFT_02g006390 [Sorghum bicolor]
gi|241922923|gb|EER96067.1| hypothetical protein SORBIDRAFT_02g006390 [Sorghum bicolor]
Length = 492
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 45 IRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
+ + H + E+RRR K+NERF +LR ++P K D AS L + IEYV+ L+ ++Q+ E S
Sbjct: 316 LSASHVLKERRRREKLNERFVMLRSLVPFV-TKMDRASILGDTIEYVKQLRRRIQELESS 374
>gi|302836249|ref|XP_002949685.1| hypothetical protein VOLCADRAFT_120807 [Volvox carteri f.
nagariensis]
gi|300265044|gb|EFJ49237.1| hypothetical protein VOLCADRAFT_120807 [Volvox carteri f.
nagariensis]
Length = 393
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 15/78 (19%)
Query: 49 HSVTEQRRRSKINER--------------FQILREIIPHSDQKRDTASFLLEVIEYVQYL 94
H EQRRR++INER ++LR+++PH++ + +TA FL EVI+Y++ L
Sbjct: 40 HQAAEQRRRTRINERQVDALKPWRACDKKLELLRKLVPHAE-RANTACFLEEVIKYIEAL 98
Query: 95 QEKVQKYEVSYQDWSAEP 112
+ + + E + + +P
Sbjct: 99 KRRTMELETMLEAATGKP 116
>gi|242084158|ref|XP_002442504.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
gi|241943197|gb|EES16342.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
Length = 531
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRR +INE+ + L+E+IPH + K D AS L E IEY++ LQ ++Q
Sbjct: 319 HNLSERRRRDRINEKMKALQELIPHCN-KTDKASMLDEAIEYLKSLQLQLQ 368
>gi|125554388|gb|EAY99993.1| hypothetical protein OsI_21996 [Oryza sativa Indica Group]
Length = 477
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR KI+ER + L++++P+S+ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 326 HSIAERLRREKISERMKNLQDLVPNSN-KADKASMLDEIIDYVKFLQLQVKVLSMS 380
>gi|46108514|ref|XP_381315.1| hypothetical protein FG01139.1 [Gibberella zeae PH-1]
Length = 403
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
++ HS+ E+RRRSK+NE F +L+ +IP S L IEY++YL++ V K +
Sbjct: 178 KTAHSLIERRRRSKMNEEFAVLKGMIPACTGDMHKLSILQASIEYIRYLEDCVSKLKAQQ 237
Query: 106 QD 107
+D
Sbjct: 238 ED 239
>gi|389827986|gb|AFL02463.1| transcription factor bHLH3 [Fragaria x ananassa]
Length = 697
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 30 NSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIE 89
++ + G + D+ S + H + E+RRR K+NERF ILR ++P K D AS L + IE
Sbjct: 459 STRLRKGTSQDELS---ANHVLAERRRREKLNERFIILRSLVPFVT-KMDKASILGDTIE 514
Query: 90 YVQYLQEKVQKYE 102
YV+ L++K++ E
Sbjct: 515 YVKQLRKKIKDLE 527
>gi|357480125|ref|XP_003610348.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511403|gb|AES92545.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 400
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P+++ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 207 HSIAERLRRERIAERMKALQELVPNAN-KTDKASMLDEIIDYVKFLQVQVKVLSMS 261
>gi|255565242|ref|XP_002523613.1| conserved hypothetical protein [Ricinus communis]
gi|223537175|gb|EEF38808.1| conserved hypothetical protein [Ricinus communis]
Length = 406
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Query: 9 EEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILR 68
E D E +E + EA + A ++S K S H+++E+RRRS+INE+ + L+
Sbjct: 129 HECDCESEEGL---EALIEEVQTKAAPPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQ 185
Query: 69 EIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+IP+S+ K D AS L E IEY++ LQ +VQ
Sbjct: 186 NLIPNSN-KTDKASMLDEAIEYLKQLQLQVQ 215
>gi|406862693|gb|EKD15742.1| helix-loop-helix DNA-binding domain-containing protein [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 382
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
++ HS+ E+RRRSK+NE F IL+++IP + + L I+YV+YL++ V K +
Sbjct: 159 KTAHSLIERRRRSKMNEEFGILKDMIPACTGEMHKLAILQASIDYVRYLEDCVAKLKAEN 218
Query: 106 QDWSAEPT 113
+A PT
Sbjct: 219 NRTNATPT 226
>gi|302798949|ref|XP_002981234.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
gi|300151288|gb|EFJ17935.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
Length = 443
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P+S+ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 270 HSIAERLRRERIAERMKSLQELVPNSN-KTDKASMLDEIIDYVKFLQLQVKVLSMS 324
>gi|340513911|gb|EGR44186.1| predicted protein [Trichoderma reesei QM6a]
Length = 456
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV 103
++ HS+ E+RRRSK+NE F +L+ +IP + + L IEYV+YL++ V K +
Sbjct: 191 KTAHSLIERRRRSKMNEEFALLKSMIPACTGEMHKLAILQASIEYVRYLEDCVAKLKA 248
>gi|449485549|ref|XP_004157205.1| PREDICTED: uncharacterized protein LOC101227644 [Cucumis sativus]
Length = 415
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 37 KNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQE 96
++S K S H+++E+RRRS+INE+ + L+ +IP+S+ K D AS L E IEY++ LQ
Sbjct: 167 RSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSN-KTDKASMLDEAIEYLKQLQL 225
Query: 97 KVQ 99
+VQ
Sbjct: 226 QVQ 228
>gi|413917616|gb|AFW57548.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 505
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 54/90 (60%), Gaps = 13/90 (14%)
Query: 10 EEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILRE 69
+ED +D+ +++ AA + K A V H+++E+RRR +INE+ + L+E
Sbjct: 300 DEDLDDEPGATRRSAA--------RSAKRCRTAEV----HNLSERRRRDRINEKMRALQE 347
Query: 70 IIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+IP+ + K D +S L E IEY++ LQ +VQ
Sbjct: 348 LIPNCN-KVDKSSMLEEAIEYLKTLQLQVQ 376
>gi|357480123|ref|XP_003610347.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511402|gb|AES92544.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 403
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P+++ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 210 HSIAERLRRERIAERMKALQELVPNAN-KTDKASMLDEIIDYVKFLQVQVKVLSMS 264
>gi|1086540|gb|AAC49219.1| Ra [Oryza sativa]
Length = 586
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQ 106
H ++E+RRR K+NE F IL+ ++P S K D AS L E I Y++ L+++V++ E S Q
Sbjct: 400 HVMSERRRREKLNEMFLILKSVVP-SIHKVDKASILAETIAYLKELEKRVEELESSSQ 456
>gi|297606720|ref|NP_001058876.2| Os07g0143200 [Oryza sativa Japonica Group]
gi|255677508|dbj|BAF20790.2| Os07g0143200 [Oryza sativa Japonica Group]
Length = 447
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRR +INE+ + L+E++PH + K D AS L E IEY++ LQ +VQ
Sbjct: 234 HNLSERRRRDRINEKLRALQELVPHCN-KTDKASILDEAIEYLKSLQMQVQ 283
>gi|224137582|ref|XP_002327162.1| predicted protein [Populus trichocarpa]
gi|222835477|gb|EEE73912.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRRS+INE+ + L+ +IP+S+ K D AS L E IEY++ LQ +VQ
Sbjct: 128 HNLSEKRRRSRINEKMKALQNLIPNSN-KTDKASMLDEAIEYLKQLQLQVQ 177
>gi|297825371|ref|XP_002880568.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326407|gb|EFH56827.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
HS+ E+ RR +I ER + L+E++P+ + K D AS L E+I+YV++LQ +V+ +S
Sbjct: 149 HSIAERLRRERIAERMKALQELVPNGN-KTDKASMLDEIIDYVKFLQLQVKVLSMSRLGG 207
Query: 109 SA 110
+A
Sbjct: 208 AA 209
>gi|358388932|gb|EHK26525.1| hypothetical protein TRIVIDRAFT_142610 [Trichoderma virens Gv29-8]
Length = 374
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
++ HS+ E+RRRSK+NE F +L+ +IP + + L IEYV+YL++ V K +
Sbjct: 160 KTAHSLIERRRRSKMNEEFALLKSMIPACTGEMHKLAILQASIEYVRYLEDCVAKLKAQQ 219
Query: 106 QDWSAEP----TKLMPWRNSH 122
+ + P + L P R H
Sbjct: 220 EQSQSRPEASHSPLPPIREFH 240
>gi|356505096|ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 517
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 57/102 (55%), Gaps = 14/102 (13%)
Query: 2 RTTKGNREEEDYE----DDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRR 57
R KG RE E++E D +F S EA + G S K S H+++E+RRR
Sbjct: 271 RKRKG-REAEEWECQSEDVDFES--EAKKQVC------GSTSTKRSRAAEVHNLSERRRR 321
Query: 58 SKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+INE+ + L+E+IP + K D AS L E I Y++ LQ +VQ
Sbjct: 322 DRINEKMKALQELIPRCN-KSDKASMLDEAISYLKSLQLQVQ 362
>gi|224071909|ref|XP_002303592.1| predicted protein [Populus trichocarpa]
gi|222841024|gb|EEE78571.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 41 KASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQK 100
+A I + H ++E+RRR K+N+RF IL+ I+P S K D S L + I+Y+Q L+ KV++
Sbjct: 421 EADEIGASHVLSERRRREKLNKRFMILKSIVP-SISKVDKVSILDDTIQYLQELERKVEE 479
Query: 101 YEV 103
E
Sbjct: 480 LEC 482
>gi|125526531|gb|EAY74645.1| hypothetical protein OsI_02537 [Oryza sativa Indica Group]
Length = 420
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 15 DDEFMSKKEAASNITNSNAKDG---KNSDKASVIRSKHSVTEQRRRSKINERFQILREII 71
D E ++ EAA + G N S H ++E+RRR K+NE F IL+ ++
Sbjct: 202 DKEAVAGGEAAQRLLKKVVGGGGAWMNRAAGSCSIKNHVMSERRRREKLNEMFLILKSLV 261
Query: 72 PHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
P D K D AS L E I Y++ L+ +VQ+ E
Sbjct: 262 PSID-KVDKASILSETIAYLKELERRVQELE 291
>gi|224082622|ref|XP_002306769.1| predicted protein [Populus trichocarpa]
gi|222856218|gb|EEE93765.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 31 SNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEY 90
S + G D+ S + H + E+RRR K+NERF +LR ++P K D AS L + IEY
Sbjct: 356 SRFRKGTPQDELS---ANHVLAERRRREKLNERFIMLRSLVPFVT-KMDKASILGDTIEY 411
Query: 91 VQYLQEKVQKYE 102
V+ L++K+Q E
Sbjct: 412 VKQLRQKIQDLE 423
>gi|115461581|ref|NP_001054390.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|57863903|gb|AAW56931.1| unknown protein [Oryza sativa Japonica Group]
gi|57863910|gb|AAS88824.2| unknown protein [Oryza sativa Japonica Group]
gi|113577941|dbj|BAF16304.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|215686863|dbj|BAG89713.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629873|gb|EEE62005.1| hypothetical protein OsJ_16787 [Oryza sativa Japonica Group]
gi|323388921|gb|ADX60265.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 339
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 13/134 (9%)
Query: 13 YEDDEFMSKKEAA-----SNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQIL 67
++DD KEAA + + A+ G+ +D HS+ E+ RR KI+ER ++L
Sbjct: 157 HDDDVKKKAKEAAGGEPPAGYIHVRARRGQATDS-------HSLAERVRREKISERMKML 209
Query: 68 REIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRV-Q 126
+ ++P D+ A L E+I YVQ LQ +V+ + S + P + H V +
Sbjct: 210 QSLVPGCDKVTGKALMLDEIISYVQSLQNQVEFLSMKLASLSPLMYEFGPGIDMHPDVLR 269
Query: 127 NFATQPHAIKNGSG 140
A PH + G
Sbjct: 270 QLAKMPHEMVQCMG 283
>gi|357482855|ref|XP_003611714.1| Transcription factor SPATULA [Medicago truncatula]
gi|355513049|gb|AES94672.1| Transcription factor SPATULA [Medicago truncatula]
Length = 344
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRRS+INE+ + L+ +IP+S+ K D AS L E IEY++ LQ +VQ
Sbjct: 116 HNLSEKRRRSRINEKMKALQNLIPNSN-KTDKASMLDEAIEYLKQLQLQVQ 165
>gi|449445700|ref|XP_004140610.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 39 SDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKV 98
S K S + H+ +E++RR KIN+R + L++++P+S+ K D AS L EVIEY++ LQ +V
Sbjct: 288 STKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSN-KTDKASMLDEVIEYLKQLQAQV 346
Query: 99 Q 99
Q
Sbjct: 347 Q 347
>gi|125591254|gb|EAZ31604.1| hypothetical protein OsJ_15747 [Oryza sativa Japonica Group]
Length = 213
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 46/69 (66%), Gaps = 5/69 (7%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
H ++E+RRR K+NE F IL+ ++P S +K D AS L E I Y++ L+++V++ E S
Sbjct: 141 HVMSERRRREKLNEMFLILKSLLP-SVRKVDKASILAETITYLKVLEKRVKELESS---- 195
Query: 109 SAEPTKLMP 117
S EP++ P
Sbjct: 196 SREPSRWRP 204
>gi|356564915|ref|XP_003550692.1| PREDICTED: transcription factor bHLH69-like [Glycine max]
Length = 369
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
HS+ E+ RR +I ER + L+E++P+++ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 208 HSIAERLRRERIAERMKALQELVPNAN-KTDKASMLDEIIDYVKFLQLQVKVLSMSRLGG 266
Query: 109 SAEPTKLM 116
+A L+
Sbjct: 267 AAAVAPLV 274
>gi|312282875|dbj|BAJ34303.1| unnamed protein product [Thellungiella halophila]
Length = 615
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H+ +E++RR K+N+RF LR IIP S K D S L + IEY+Q LQ +VQ+ E
Sbjct: 424 ANHAFSERKRREKLNDRFMTLRSIIP-SISKIDKVSILDDTIEYLQELQRRVQELE 478
>gi|449515887|ref|XP_004164979.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 39 SDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKV 98
S K S + H+ +E++RR KIN+R + L++++P+S+ K D AS L EVIEY++ LQ +V
Sbjct: 288 STKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSN-KTDKASMLDEVIEYLKQLQAQV 346
Query: 99 Q 99
Q
Sbjct: 347 Q 347
>gi|222636798|gb|EEE66930.1| hypothetical protein OsJ_23788 [Oryza sativa Japonica Group]
Length = 555
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 19 MSKKEAASNITNSNAKDGK----NSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHS 74
+ KK A N DG +D+ S I++ H ++E+RRR K+ E F IL+ ++P S
Sbjct: 309 LLKKAVAGAGAWMNNADGSAATMTTDQGSSIKN-HVMSERRRREKLKEMFLILKSVVP-S 366
Query: 75 DQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQ 106
K D AS L E I Y++ L+++V++ E S Q
Sbjct: 367 IHKVDKASILAETIAYLKELEKRVEELESSSQ 398
>gi|308084333|gb|ADO13282.1| bHLH [Pisum sativum]
Length = 652
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 45 IRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ + H + E+RRR K+NERF ILR ++P K D AS L + IEY++ L+ K+Q E
Sbjct: 465 LSANHVLAERRRREKLNERFIILRSLVPFVT-KMDKASILGDTIEYLKQLRRKIQDLE 521
>gi|297603151|ref|NP_001053531.2| Os04g0557500 [Oryza sativa Japonica Group]
gi|255675675|dbj|BAF15445.2| Os04g0557500 [Oryza sativa Japonica Group]
Length = 315
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 47/71 (66%), Gaps = 8/71 (11%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
H ++E+RRR K+NE F IL+ ++P S +K D AS L E I Y++ L+++V++ E S
Sbjct: 243 HVMSERRRREKLNEMFLILKSLLP-SVRKVDKASILAETITYLKVLEKRVKELESS---- 297
Query: 109 SAEPTKLMPWR 119
S EP++ WR
Sbjct: 298 SREPSR---WR 305
>gi|356553958|ref|XP_003545317.1| PREDICTED: transcription factor ALC-like [Glycine max]
Length = 181
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 37 KNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQE 96
++S K S H+++E+RRRS+INE+ + L+ +IP+S+ K D AS L E IEY++ LQ
Sbjct: 118 RSSSKRSRAAEFHNLSEKRRRSRINEKMKALQNLIPNSN-KTDKASMLDEAIEYLKQLQL 176
Query: 97 KVQ 99
+VQ
Sbjct: 177 QVQ 179
>gi|222636338|gb|EEE66470.1| hypothetical protein OsJ_22880 [Oryza sativa Japonica Group]
Length = 553
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 24 AASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASF 83
A + + N ++ + + S I++ H ++E+RRR K+NE F IL+ ++P S + D AS
Sbjct: 358 AGAWMNNGDSSAAAMTTQGSSIKN-HVMSERRRREKLNEMFLILKSVVP-SIHRVDKASI 415
Query: 84 LLEVIEYVQYLQEKVQKYEVSYQ 106
L E I Y++ L+++V++ E S Q
Sbjct: 416 LAETIAYLKELEKRVEELESSSQ 438
>gi|159141924|gb|ABW89744.1| putative anthocyanin regulatory Lc protein [Oryza sativa Indica
Group]
gi|159141926|gb|ABW89745.1| putative anthocyanin regulatory Lc protein [Oryza sativa Japonica
Group]
Length = 588
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 24 AASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASF 83
A + + N ++ + + S I++ H ++E+RRR K+NE F IL+ ++P S + D AS
Sbjct: 376 AGAWMNNGDSSAAAMTTQGSSIKN-HVMSERRRREKLNEMFLILKSVVP-SIHRVDKASI 433
Query: 84 LLEVIEYVQYLQEKVQKYEVSYQ 106
L E I Y++ L+++V++ E S Q
Sbjct: 434 LAETIAYLKELEKRVEELESSSQ 456
>gi|115459864|ref|NP_001053532.1| Os04g0557800 [Oryza sativa Japonica Group]
gi|38345755|emb|CAE03483.2| OSJNBa0065O17.8 [Oryza sativa Japonica Group]
gi|113565103|dbj|BAF15446.1| Os04g0557800 [Oryza sativa Japonica Group]
Length = 574
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 24 AASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASF 83
A + + N ++ + + S I++ H ++E+RRR K+NE F IL+ ++P S + D AS
Sbjct: 376 AGAWMNNGDSSAAAMTTQGSSIKN-HVMSERRRREKLNEMFLILKSVVP-SIHRVDKASI 433
Query: 84 LLEVIEYVQYLQEKVQKYEVSYQ 106
L E I Y++ L+++V++ E S Q
Sbjct: 434 LAETIAYLKELEKRVEELESSSQ 456
>gi|357440757|ref|XP_003590656.1| Transcription factor TT8 [Medicago truncatula]
gi|355479704|gb|AES60907.1| Transcription factor TT8 [Medicago truncatula]
Length = 656
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 45 IRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ + H + E+RRR K+NERF ILR ++P K D AS L + IEY++ L+ K+Q E
Sbjct: 467 LSANHVLAERRRREKLNERFIILRSLVPFVT-KMDKASILGDTIEYLKQLRRKIQDLE 523
>gi|297814329|ref|XP_002875048.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
gi|297320885|gb|EFH51307.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 39 SDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKV 98
S K S + H+ +E++RR KIN+R +IL++++P+S K D AS L EVIEY++ LQ +V
Sbjct: 210 STKRSRAAAIHNQSERKRRDKINQRMKILQKLVPNSS-KTDKASMLDEVIEYLKQLQAQV 268
>gi|4567302|gb|AAD23713.1| unknown protein [Arabidopsis thaliana]
Length = 226
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 33 AKDGKNSDKASVI-RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYV 91
A+ G+ +D S+ R H++T+ RR KIN R ++L+E++P D+ + TA L E+I +V
Sbjct: 131 ARRGQATDNHSLAERVIHNLTDMARREKINARMKLLQELVPGCDKIQGTALVLDEIINHV 190
Query: 92 QYLQEKVQ 99
Q LQ +V+
Sbjct: 191 QTLQRQVE 198
>gi|357119125|ref|XP_003561296.1| PREDICTED: transcription factor TT8-like [Brachypodium distachyon]
Length = 658
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 35 DGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYL 94
+G +A+ + + H + E++RR K+NERF ILR ++P K D AS L + IEYV+ L
Sbjct: 445 EGGPRREAADLSANHVLQERKRREKLNERFIILRSLVPFV-TKMDKASILGDTIEYVKQL 503
Query: 95 QEKVQKYEVS 104
+ ++Q E S
Sbjct: 504 RSRIQDLESS 513
>gi|367043674|ref|XP_003652217.1| hypothetical protein THITE_2143564 [Thielavia terrestris NRRL 8126]
gi|346999479|gb|AEO65881.1| hypothetical protein THITE_2143564 [Thielavia terrestris NRRL 8126]
Length = 369
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV 103
++ HS+ E+RRRSK+NE F +L+ +IP + + L IEYV+YL++ + K +
Sbjct: 143 KTAHSLIERRRRSKMNEEFAVLKSLIPACTGEMHKLAILQASIEYVRYLEDCIAKLKA 200
>gi|15425627|dbj|BAB64301.1| R-type basic helix-loop-helix protein [Oryza sativa]
Length = 588
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 24 AASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASF 83
A + + N ++ + + S I++ H ++E+RRR K+NE F IL+ ++P S + D AS
Sbjct: 376 AGAWMNNGDSSAAAMTTQGSSIKN-HVMSERRRREKLNEMFLILKSVVP-SIHRVDKASI 433
Query: 84 LLEVIEYVQYLQEKVQKYEVSYQ 106
L E I Y++ L+++V++ E S Q
Sbjct: 434 LAETIAYLKELEKRVEELESSSQ 456
>gi|255541166|ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
gi|223548827|gb|EEF50316.1| DNA binding protein, putative [Ricinus communis]
Length = 465
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 39 SDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKV 98
S K S + H+ +E++RR KIN+R + L++++P+S K D AS L EVIEY++ LQ +V
Sbjct: 278 STKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSS-KTDKASMLDEVIEYLKQLQAQV 336
Query: 99 Q 99
Q
Sbjct: 337 Q 337
>gi|356495472|ref|XP_003516601.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 375
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRRS+INE+ + L+ +IP+S+ K D AS L E IEY++ LQ +VQ
Sbjct: 149 HNLSEKRRRSRINEKMKALQNLIPNSN-KTDKASMLDEAIEYLKQLQLQVQ 198
>gi|359480088|ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
Length = 517
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 36 GKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQ 95
G + K S H+++E+RRR +INE+ + L+E+IP + K D AS L E IEY++ LQ
Sbjct: 300 GSATAKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCN-KSDKASMLDEAIEYLKSLQ 358
Query: 96 EKVQ 99
+VQ
Sbjct: 359 LQVQ 362
>gi|218195356|gb|EEC77783.1| hypothetical protein OsI_16952 [Oryza sativa Indica Group]
Length = 443
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 46/69 (66%), Gaps = 5/69 (7%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
H ++E+RRR K+NE F IL+ ++P S +K D AS L E I Y++ L+++V++ E S
Sbjct: 371 HVMSERRRREKLNEMFLILKSLLP-SVRKVDKASILAETITYLKVLEKRVKELESS---- 425
Query: 109 SAEPTKLMP 117
S EP++ P
Sbjct: 426 SREPSRWRP 434
>gi|55773907|dbj|BAD72512.1| bHLH transcription factor PTF1-like [Oryza sativa Japonica Group]
Length = 420
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
HS+ E+ RR +I ER + L+E++P+++ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 215 HSIAERLRRERIAERMKSLQELVPNAN-KTDKASMLDEIIDYVKFLQLQVKVLSMSRLGG 273
Query: 109 SA 110
+A
Sbjct: 274 AA 275
>gi|15425629|dbj|BAB64302.1| R-type basic helix-loop-helix protein [Oryza sativa]
Length = 451
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 46/69 (66%), Gaps = 5/69 (7%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
H ++E+RRR K+NE F IL+ ++P S +K D AS L E I Y++ L+++V++ E S
Sbjct: 379 HVMSERRRREKLNEMFLILKSLLP-SVRKVDKASILAETITYLKVLEKRVKELESS---- 433
Query: 109 SAEPTKLMP 117
S EP++ P
Sbjct: 434 SREPSRWRP 442
>gi|218197712|gb|EEC80139.1| hypothetical protein OsI_21931 [Oryza sativa Indica Group]
Length = 420
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
HS+ E+ RR +I ER + L+E++P+++ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 215 HSIAERLRRERIAERMKSLQELVPNAN-KTDKASMLDEIIDYVKFLQLQVKVLSMSRLGG 273
Query: 109 SA 110
+A
Sbjct: 274 AA 275
>gi|356567480|ref|XP_003551947.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 397
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 5 KGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERF 64
KG EE E E K A N ++ A + + A V H+++E+RRR +INE+
Sbjct: 166 KGIDVEESEEQSEDTELKSALGNKSSQRAGLARRNRAAEV----HNLSERRRRDRINEKM 221
Query: 65 QILREIIPHSDQKRDTASFLLEVIEYVQ 92
+ L+++IPHS K D AS L E IEY++
Sbjct: 222 KALQQLIPHSS-KTDKASMLEEAIEYLK 248
>gi|54306640|gb|AAV33474.1| basic helix-loop-helix protein [Fragaria x ananassa]
Length = 298
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRRS+INE+ + L+ +IP+S+ K D AS L E IEY++ LQ +VQ
Sbjct: 149 HNLSEKRRRSRINEKMKALQNLIPNSN-KTDKASMLDEAIEYLKQLQLQVQ 198
>gi|300827221|gb|ADK36622.1| Rc protein [Oryza meridionalis]
Length = 672
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E S
Sbjct: 490 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELESS 546
>gi|356541324|ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 459
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 39 SDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKV 98
S K S + H+ +E++RR KIN+R + L++++P+S K D AS L EVIEY++ LQ +V
Sbjct: 265 STKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSS-KTDKASMLDEVIEYLKQLQAQV 323
Query: 99 Q 99
Q
Sbjct: 324 Q 324
>gi|38345752|emb|CAE03480.2| OSJNBa0065O17.5 [Oryza sativa Japonica Group]
Length = 265
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 47/71 (66%), Gaps = 8/71 (11%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
H ++E+RRR K+NE F IL+ ++P S +K D AS L E I Y++ L+++V++ E S
Sbjct: 193 HVMSERRRREKLNEMFLILKSLLP-SVRKVDKASILAETITYLKVLEKRVKELESS---- 247
Query: 109 SAEPTKLMPWR 119
S EP++ WR
Sbjct: 248 SREPSR---WR 255
>gi|324103810|gb|ADY17835.1| bHLH transcription factor [Oryza sativa]
Length = 671
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 487 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 541
>gi|527655|gb|AAA80172.1| myc-like regulatory R gene product, partial [Cenchrus americanus]
Length = 139
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 62/114 (54%), Gaps = 5/114 (4%)
Query: 48 KHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQD 107
KH ++E++RR K+NE F +L+ ++P S K D AS L E I Y++ LQ +VQ+ E S +
Sbjct: 2 KHVMSERKRREKLNEMFLVLKSLVP-SIHKVDKASILAETIAYLKELQRRVQELESSREP 60
Query: 108 WSAEPTKLMPWRNSHWRVQNF----ATQPHAIKNGSGPGSMFPGKFDDNSISMS 157
+ P++ H ++ ++ A + GSG P K D +++++
Sbjct: 61 MISRPSETRKVTRRHDDDEDVGNGSGSKRKASELGSGVEREHPTKDDTTNVTVT 114
>gi|297744279|emb|CBI37249.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 36 GKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQ 95
G + K S H+++E+RRR +INE+ + L+E+IP + K D AS L E IEY++ LQ
Sbjct: 262 GSATAKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCN-KSDKASMLDEAIEYLKSLQ 320
Query: 96 EKVQ 99
+VQ
Sbjct: 321 LQVQ 324
>gi|300827209|gb|ADK36616.1| Rc protein [Oryza rufipogon]
Length = 664
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 482 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 536
>gi|414591460|tpg|DAA42031.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 519
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 22 KEAASNITNSNAKDGKNSDKASV---------IRSKHSVTEQRRRSKINERFQILREIIP 72
++A + +S KDGK S+ S + +K+ + E+RRR K+N+R +LR ++P
Sbjct: 288 EDACRGVEDSGKKDGKGSNANSAGDGKGKRKRLPAKNLMAERRRRKKLNDRLYMLRSVVP 347
Query: 73 HSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
K D AS L + IEY++ L K+++ +
Sbjct: 348 KI-SKMDRASILGDAIEYLKELLRKIEELQ 376
>gi|324103814|gb|ADY17837.1| bHLH transcription factor [Oryza sativa]
Length = 671
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 487 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 541
>gi|356526934|ref|XP_003532070.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 266
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 10 EEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILRE 69
EE ED E K A N ++ + + A V H+++E+RRR +INE+ + L++
Sbjct: 41 EEQSEDTEL---KSALGNKSSQRTGSARRNRAAEV----HNLSERRRRDRINEKMKALQQ 93
Query: 70 IIPHSDQKRDTASFLLEVIEYVQ 92
+IPHS K D AS L E IEY++
Sbjct: 94 LIPHSS-KTDKASMLEEAIEYLK 115
>gi|326497797|dbj|BAK05983.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRRS+INE+ + L+ +IP+S+ K D AS L E IEY++ LQ +VQ
Sbjct: 167 HNLSEKRRRSRINEKMKALQSLIPNSN-KTDKASMLDEAIEYLKQLQLQVQ 216
>gi|225460440|ref|XP_002271390.1| PREDICTED: transcription factor bHLH80-like [Vitis vinifera]
Length = 251
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 41/52 (78%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQK 100
S+ E+ RR++I++R + L+E++P+ D++ +TA L E +EYV++LQ+K+Q+
Sbjct: 186 RSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQKIQE 237
>gi|163311846|gb|ABY26936.1| putative anthocyanin transcriptional regulator [Ipomoea
horsfalliae]
Length = 672
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
+ H + E+RRR K+NERF ILR ++P K D S L + IEYV+ L+ ++Q+ E S
Sbjct: 473 ANHVLAERRRREKLNERFIILRALVPFLT-KMDKVSILGDTIEYVKQLRRRIQELEAS 529
>gi|162463519|ref|NP_001105706.1| colored plant1 [Zea mays]
gi|22195|emb|CAA40544.1| regulatory protein [Zea mays]
Length = 562
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 30 NSNAKDGKNSDKASVIRSK-HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVI 88
N+N G + A +K H ++E++RR K+NE F +L+ ++P S K D AS L E I
Sbjct: 366 NTNCGGGGTTVTAQENGAKNHVMSERKRREKLNEMFLVLKSLVP-SIHKVDKASILAETI 424
Query: 89 EYVQYLQEKVQKYE 102
Y++ LQ +VQ+ E
Sbjct: 425 AYLKELQRRVQELE 438
>gi|324103822|gb|ADY17841.1| bHLH transcription factor [Oryza rufipogon]
Length = 669
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 487 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 541
>gi|324103812|gb|ADY17836.1| bHLH transcription factor [Oryza sativa]
Length = 671
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 487 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 541
>gi|300394152|gb|ADK11703.1| enhancer of glabra 3 [Brassica rapa subsp. rapa]
Length = 597
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H+++E++RR K+N+RF LR +IP S K D S L + IEY+Q LQ +VQ+ E
Sbjct: 408 ANHALSERKRREKLNDRFMTLRSMIP-SISKIDKVSILDDTIEYLQELQRRVQELE 462
>gi|227345480|gb|ACP28172.1| roothairless1/slippery [Lotus japonicus]
Length = 386
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
HS+ E+ RR +I ER + L+E++P+++ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 185 HSIAERLRRERIAERMKALQELVPNAN-KTDKASMLDEIIDYVKFLQLQVKVLSMSRLGG 243
Query: 109 SAEPTKLM 116
+A L+
Sbjct: 244 AAAVAPLV 251
>gi|159505446|gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis]
Length = 370
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 21/104 (20%)
Query: 17 EFMSKKEAASNITNSNAKDGKNSDKASV--------------IRSK-------HSVTEQR 55
E SKK+ N+ ++ ++ +NS KA +R++ HS+ E+
Sbjct: 141 EVKSKKQKKGNVNDAKKEEKENSPKADSEKKVAKEPPKDYIHVRARRGQATDSHSLAERV 200
Query: 56 RRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
RR KI+ER +IL++++P D+ A L E+I YVQ+LQ +V+
Sbjct: 201 RREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
>gi|324103824|gb|ADY17842.1| bHLH transcription factor [Oryza glaberrima]
Length = 671
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 487 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 541
>gi|324103806|gb|ADY17833.1| bHLH transcription factor [Oryza sativa Indica Group]
gi|324103828|gb|ADY17844.1| bHLH transcription factor [Oryza sativa Indica Group]
Length = 671
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 487 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 541
>gi|300827205|gb|ADK36614.1| Rc protein [Oryza rufipogon]
Length = 664
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 482 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 536
>gi|119672869|dbj|BAF42668.1| bHLH protein [Oryza sativa Indica Group]
gi|324103816|gb|ADY17838.1| bHLH transcription factor [Oryza sativa]
Length = 673
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 487 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 541
>gi|380006417|gb|AFD29599.1| DEL61 [Gossypium arboreum]
Length = 603
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
H +TE+RRR KINER IL+ ++P ++ K D S L + IEY+Q L+ +V++ E
Sbjct: 425 HVLTERRRREKINERLTILKSLVP-TNSKADKVSILDDTIEYLQDLERRVEELECC 479
>gi|333470596|gb|AEF33833.1| ICE transcription factor 1 [Eucalyptus globulus]
gi|333470598|gb|AEF33834.1| ICE transcription factor 1 [Eucalyptus globulus]
Length = 560
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Query: 3 TTKGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINE 62
T +GN + ED SK E ++ NS G K + +K+ + E+RRR K+N+
Sbjct: 332 TDEGNESGKGMED----SKHEGCNSNANSTVTVGDQKGKKKGLPAKNLMAERRRRKKLND 387
Query: 63 RFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMP 117
R +LR ++P K D AS L + I+Y++ L +++ + S P ++P
Sbjct: 388 RLYMLRSVVPKI-SKMDRASILGDAIDYLKELLQRINDLHNELE--STPPGTMLP 439
>gi|119672867|dbj|BAF42667.1| Myc-like proanthocyanidin regulatory protein [Oryza sativa Indica
Group]
Length = 673
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 487 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 541
>gi|324103820|gb|ADY17840.1| bHLH transcription factor, partial [Oryza rufipogon]
Length = 639
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 455 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 509
>gi|122934781|gb|ABM68354.1| Rc protein [Oryza sativa Indica Group]
Length = 636
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 450 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 504
>gi|122934777|gb|ABM68352.1| Rc protein [Oryza sativa Indica Group]
Length = 634
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 450 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 504
>gi|122934775|gb|ABM68351.1| Rc protein [Oryza sativa Indica Group]
Length = 634
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 450 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 504
>gi|122934767|gb|ABM68347.1| Rc protein [Oryza sativa Japonica Group]
gi|122934771|gb|ABM68349.1| Rc protein [Oryza sativa Japonica Group]
gi|122934773|gb|ABM68350.1| Rc protein [Oryza sativa Japonica Group]
Length = 634
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 450 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 504
>gi|122934779|gb|ABM68353.1| Rc protein [Oryza sativa Indica Group]
Length = 634
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 450 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 504
>gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 407
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 8 REEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQIL 67
+E E DE S+ E A+ S K S H+++E++RR +INER + L
Sbjct: 182 KEREATTTDETESRSEE-----TKQARVSTTSTKRSRAAEVHNLSERKRRDRINERMKAL 236
Query: 68 REIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+E+IP + K D AS L E IEY++ LQ ++Q
Sbjct: 237 QELIPRCN-KSDKASMLDEAIEYMKSLQLQIQ 267
>gi|312837910|gb|ADR01102.1| Rc protein [Oryza glaberrima]
gi|312837918|gb|ADR01106.1| Rc protein [Oryza glaberrima]
Length = 664
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 482 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 536
>gi|78057267|gb|ABB17166.1| brown pericarp and seed coat [Oryza sativa Japonica Group]
Length = 666
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 482 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 536
>gi|312837906|gb|ADR01101.1| Rc protein [Oryza barthii]
gi|312837912|gb|ADR01103.1| Rc protein [Oryza glaberrima]
gi|312837914|gb|ADR01104.1| Rc protein [Oryza glaberrima]
gi|312837916|gb|ADR01105.1| Rc protein [Oryza glaberrima]
Length = 664
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 482 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 536
>gi|312837904|gb|ADR01100.1| Rc protein [Oryza barthii]
Length = 664
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 482 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 536
>gi|78057270|gb|ABB17167.1| brown pericarp and seed coat [Oryza rufipogon]
gi|300827057|gb|ADK36540.1| Rc protein [Oryza sativa]
gi|300827059|gb|ADK36541.1| Rc protein [Oryza sativa]
gi|300827061|gb|ADK36542.1| Rc protein [Oryza sativa]
gi|300827063|gb|ADK36543.1| Rc protein [Oryza sativa]
gi|300827065|gb|ADK36544.1| Rc protein [Oryza sativa]
gi|300827067|gb|ADK36545.1| Rc protein [Oryza sativa]
gi|300827069|gb|ADK36546.1| Rc protein [Oryza sativa]
gi|300827071|gb|ADK36547.1| Rc protein [Oryza sativa]
gi|300827073|gb|ADK36548.1| Rc protein [Oryza sativa]
gi|300827075|gb|ADK36549.1| Rc protein [Oryza sativa]
gi|300827077|gb|ADK36550.1| Rc protein [Oryza sativa]
gi|300827079|gb|ADK36551.1| Rc protein [Oryza sativa]
gi|300827081|gb|ADK36552.1| Rc protein [Oryza sativa]
gi|300827083|gb|ADK36553.1| Rc protein [Oryza sativa]
gi|300827085|gb|ADK36554.1| Rc protein [Oryza sativa]
gi|300827087|gb|ADK36555.1| Rc protein [Oryza sativa]
gi|300827089|gb|ADK36556.1| Rc protein [Oryza sativa]
gi|300827093|gb|ADK36558.1| Rc protein [Oryza sativa]
gi|300827095|gb|ADK36559.1| Rc protein [Oryza sativa]
gi|300827097|gb|ADK36560.1| Rc protein [Oryza sativa]
gi|300827099|gb|ADK36561.1| Rc protein [Oryza sativa]
gi|300827101|gb|ADK36562.1| Rc protein [Oryza sativa]
gi|300827103|gb|ADK36563.1| Rc protein [Oryza sativa]
gi|300827105|gb|ADK36564.1| Rc protein [Oryza sativa]
gi|300827107|gb|ADK36565.1| Rc protein [Oryza sativa]
gi|300827109|gb|ADK36566.1| Rc protein [Oryza sativa]
gi|300827111|gb|ADK36567.1| Rc protein [Oryza sativa]
gi|300827113|gb|ADK36568.1| Rc protein [Oryza sativa]
gi|300827115|gb|ADK36569.1| Rc protein [Oryza sativa]
gi|300827117|gb|ADK36570.1| Rc protein [Oryza sativa]
gi|300827119|gb|ADK36571.1| Rc protein [Oryza sativa]
gi|300827121|gb|ADK36572.1| Rc protein [Oryza sativa]
gi|300827123|gb|ADK36573.1| Rc protein [Oryza sativa]
gi|300827125|gb|ADK36574.1| Rc protein [Oryza sativa]
gi|300827127|gb|ADK36575.1| Rc protein [Oryza sativa]
gi|300827129|gb|ADK36576.1| Rc protein [Oryza sativa]
gi|300827131|gb|ADK36577.1| Rc protein [Oryza sativa]
gi|300827133|gb|ADK36578.1| Rc protein [Oryza sativa]
gi|300827135|gb|ADK36579.1| Rc protein [Oryza sativa]
gi|300827137|gb|ADK36580.1| Rc protein [Oryza sativa]
gi|300827139|gb|ADK36581.1| Rc protein [Oryza sativa]
gi|300827141|gb|ADK36582.1| Rc protein [Oryza sativa]
gi|300827143|gb|ADK36583.1| Rc protein [Oryza sativa]
gi|300827145|gb|ADK36584.1| Rc protein [Oryza sativa]
gi|300827147|gb|ADK36585.1| Rc protein [Oryza sativa]
gi|300827149|gb|ADK36586.1| Rc protein [Oryza sativa]
gi|300827151|gb|ADK36587.1| Rc protein [Oryza sativa]
gi|300827153|gb|ADK36588.1| Rc protein [Oryza sativa]
gi|300827155|gb|ADK36589.1| Rc protein [Oryza sativa]
gi|300827157|gb|ADK36590.1| Rc protein [Oryza sativa]
gi|300827159|gb|ADK36591.1| Rc protein [Oryza sativa]
gi|300827161|gb|ADK36592.1| Rc protein [Oryza sativa]
gi|300827163|gb|ADK36593.1| Rc protein [Oryza sativa]
gi|300827165|gb|ADK36594.1| Rc protein [Oryza sativa]
gi|300827167|gb|ADK36595.1| Rc protein [Oryza sativa]
gi|300827171|gb|ADK36597.1| Rc protein [Oryza rufipogon]
gi|300827187|gb|ADK36605.1| Rc protein [Oryza rufipogon]
gi|300827207|gb|ADK36615.1| Rc protein [Oryza rufipogon]
gi|300827223|gb|ADK36623.1| Rc protein [Oryza sativa Indica Group]
gi|300827225|gb|ADK36624.1| Rc protein [Oryza sativa Indica Group]
Length = 668
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 482 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 536
>gi|300827215|gb|ADK36619.1| Rc protein [Oryza nivara]
Length = 666
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 482 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 536
>gi|300827195|gb|ADK36609.1| Rc protein [Oryza rufipogon]
Length = 666
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 482 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 536
>gi|300827179|gb|ADK36601.1| Rc protein [Oryza rufipogon]
Length = 664
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 482 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 536
>gi|300827175|gb|ADK36599.1| Rc protein [Oryza rufipogon]
Length = 666
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 482 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 536
>gi|300827169|gb|ADK36596.1| Rc protein [Oryza sativa Indica Group]
gi|300827185|gb|ADK36604.1| Rc protein [Oryza rufipogon]
gi|300827197|gb|ADK36610.1| Rc protein [Oryza rufipogon]
gi|300827211|gb|ADK36617.1| Rc protein [Oryza rufipogon]
gi|300827213|gb|ADK36618.1| Rc protein [Oryza nivara]
gi|300827227|gb|ADK36625.1| Rc protein [Oryza sativa Indica Group]
Length = 666
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 482 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 536
>gi|302798757|ref|XP_002981138.1| hypothetical protein SELMODRAFT_114141 [Selaginella
moellendorffii]
gi|300151192|gb|EFJ17839.1| hypothetical protein SELMODRAFT_114141 [Selaginella
moellendorffii]
Length = 85
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 36 GKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQ 95
+ S K S H+++E+RRR +INE+ + L+E+IP+S+ K D AS L E IEY++ LQ
Sbjct: 12 ARTSSKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSN-KTDKASMLDEAIEYLKMLQ 70
Query: 96 EKVQ 99
++Q
Sbjct: 71 LQLQ 74
>gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|119935961|gb|ABM06045.1| At2g20180 [Arabidopsis thaliana]
gi|330251884|gb|AEC06978.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 407
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 8 REEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQIL 67
+E E DE S+ E A+ S K S H+++E++RR +INER + L
Sbjct: 182 KEREATTTDETESRSEE-----TKQARVSTTSTKRSRAAEVHNLSERKRRDRINERMKAL 236
Query: 68 REIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+E+IP + K D AS L E IEY++ LQ ++Q
Sbjct: 237 QELIPRCN-KSDKASMLDEAIEYMKSLQLQIQ 267
>gi|300827181|gb|ADK36602.1| Rc protein [Oryza rufipogon]
gi|300827189|gb|ADK36606.1| Rc protein [Oryza rufipogon]
Length = 664
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 482 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 536
>gi|122934769|gb|ABM68348.1| Rc protein [Oryza sativa Japonica Group]
Length = 634
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 450 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 504
>gi|300827229|gb|ADK36626.1| Rc protein [Oryza rufipogon]
Length = 667
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 482 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 536
>gi|300827219|gb|ADK36621.1| Rc protein [Oryza glumipatula]
Length = 663
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 482 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 536
>gi|300827193|gb|ADK36608.1| Rc protein [Oryza rufipogon]
Length = 666
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 482 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 536
>gi|300827183|gb|ADK36603.1| Rc protein [Oryza rufipogon]
Length = 666
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 482 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 536
>gi|300827177|gb|ADK36600.1| Rc protein [Oryza rufipogon]
gi|300827191|gb|ADK36607.1| Rc protein [Oryza rufipogon]
Length = 664
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 482 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 536
>gi|300827091|gb|ADK36557.1| Rc protein [Oryza sativa]
Length = 668
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 482 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 536
>gi|324103818|gb|ADY17839.1| bHLH transcription factor [Oryza sativa]
Length = 671
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 487 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 541
>gi|242049278|ref|XP_002462383.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
gi|241925760|gb|EER98904.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
Length = 466
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKV 98
HS+ E+ RR +I ER + L+E++P+++ K D AS L E+I+YV++LQ +V
Sbjct: 250 HSIAERLRRERIAERMKALQELVPNAN-KTDKASMLDEIIDYVKFLQLQV 298
>gi|242066894|ref|XP_002454736.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
gi|241934567|gb|EES07712.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
Length = 277
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 5/64 (7%)
Query: 36 GKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQ 95
GK S A V H+++E+RRRS+INE+ + L+ +IP+S K D AS L + IEY++ LQ
Sbjct: 42 GKRSRAAEV----HNLSEKRRRSRINEKMKALQTLIPNSS-KTDKASMLDDAIEYLKQLQ 96
Query: 96 EKVQ 99
+VQ
Sbjct: 97 LQVQ 100
>gi|93280154|gb|ABF06705.1| Joka8 [Nicotiana plumbaginifolia]
Length = 360
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P+++ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 258 HSIAERLRRERIAERMKALQELVPNAN-KTDKASMLDEIIDYVKFLQLQVKVLSMS 312
>gi|357124947|ref|XP_003564158.1| PREDICTED: uncharacterized protein LOC100841109 [Brachypodium
distachyon]
Length = 482
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR KI+ER + L+E++P+S+ K D +S L E+I+YV++LQ +V+ +S
Sbjct: 332 HSIAERLRREKISERMKNLQELVPNSN-KADKSSMLDEIIDYVKFLQLQVKVLSMS 386
>gi|297603150|ref|NP_001053530.2| Os04g0557200 [Oryza sativa Japonica Group]
gi|215767146|dbj|BAG99374.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629342|gb|EEE61474.1| hypothetical protein OsJ_15745 [Oryza sativa Japonica Group]
gi|255675674|dbj|BAF15444.2| Os04g0557200 [Oryza sativa Japonica Group]
Length = 559
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
H ++E+RRR K+NE F IL+ I+P S K D AS L E I Y++ L+++V++ E S
Sbjct: 385 HVISERRRREKLNEMFLILKSIVP-SIHKVDKASILEETIAYLKVLEKRVKELESS 439
>gi|300827217|gb|ADK36620.1| Rc protein [Oryza glumipatula]
Length = 670
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 489 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 543
>gi|300827203|gb|ADK36613.1| Rc protein [Oryza rufipogon]
Length = 666
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 482 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 536
>gi|300827199|gb|ADK36611.1| Rc protein [Oryza rufipogon]
Length = 666
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 482 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 536
>gi|218195355|gb|EEC77782.1| hypothetical protein OsI_16951 [Oryza sativa Indica Group]
Length = 548
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
H ++E+RRR K+NE F IL+ I+P S K D AS L E I Y++ L+++V++ E S
Sbjct: 374 HVISERRRREKLNEMFLILKSIVP-SIHKVDKASILEETIAYLKVLEKRVKELESS 428
>gi|163311844|gb|ABY26935.1| putative anthocyanin transcriptional regulator [Ipomoea violacea]
Length = 684
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
H + E+RRR K+N+RF ILR ++P K D AS L + IEYV+ L+ ++Q+ E +
Sbjct: 487 HVLAERRRREKLNKRFIILRSLVPFVT-KMDKASILGDTIEYVKQLRRRIQELEAA 541
>gi|389827984|gb|AFL02462.1| transcription factor MYC1 [Fragaria x ananassa]
Length = 368
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
H + E++RR K+NERF IL+ ++P S +K D S L + IEY++ L++KV++ E S +
Sbjct: 170 HVLCERKRREKLNERFSILKSLVP-SIRKDDKVSILDDAIEYLKDLEKKVEELETSQEST 228
Query: 109 SAEPT 113
E T
Sbjct: 229 DIEAT 233
>gi|242094954|ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
gi|241916190|gb|EER89334.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
Length = 447
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P+++ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 224 HSIAERLRRERIAERMKSLQELVPNAN-KTDKASMLDEIIDYVKFLQLQVKVLSMS 278
>gi|242059665|ref|XP_002458978.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
gi|241930953|gb|EES04098.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
Length = 484
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 35/160 (21%)
Query: 9 EEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASV--------IRSK-------HSVTE 53
+E + +D K A SN N K GK+S +R++ HS+ E
Sbjct: 236 DESNGAEDNSTKGKAAQSNSENGGKKQGKDSTSKPPEPPKDYIHVRARRGEATDSHSLAE 295
Query: 54 QRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQ------D 107
+ RR KI++R ++L++++P ++ A L E+I YVQ LQ +V+ + D
Sbjct: 296 RVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLD 355
Query: 108 WSAEPTKL--------MPWRNSHWRVQN------FATQPH 133
++ P L P +NSH+ ++ + QPH
Sbjct: 356 FNNLPNLLPKDIHQSCGPLQNSHFPLETSGAPLPYLNQPH 395
>gi|296089503|emb|CBI39322.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 41/52 (78%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQK 100
S+ E+ RR++I++R + L+E++P+ D++ +TA L E +EYV++LQ+K+Q+
Sbjct: 116 RSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQKIQE 167
>gi|302801726|ref|XP_002982619.1| hypothetical protein SELMODRAFT_116654 [Selaginella
moellendorffii]
gi|300149718|gb|EFJ16372.1| hypothetical protein SELMODRAFT_116654 [Selaginella
moellendorffii]
Length = 85
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 36 GKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQ 95
+ S K S H+++E+RRR +INE+ + L+E+IP+S+ K D AS L E IEY++ LQ
Sbjct: 12 ARTSSKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSN-KTDKASMLDEAIEYLKMLQ 70
Query: 96 EKVQ 99
++Q
Sbjct: 71 LQLQ 74
>gi|116310396|emb|CAH67406.1| OSIGBa0137D06.7 [Oryza sativa Indica Group]
Length = 554
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
H ++E+RRR K+NE F IL+ I+P S K D AS L E I Y++ L+++V++ E S
Sbjct: 380 HVISERRRREKLNEMFLILKSIVP-SIHKVDKASILEETIAYLKVLEKRVKELESS 434
>gi|414868828|tpg|DAA47385.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 327
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Query: 21 KKEAASNITNSNAKD-------GKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPH 73
KKE ++T + D G S + S H++TE+RRR KINER + L++I+P
Sbjct: 146 KKEKVPSMTMTTTTDKEMRKTPGGGSSRRSHHGEAHNLTEKRRRHKINERLKTLQQIVPG 205
Query: 74 SDQKRDTASFLLEVIEYVQYLQEKVQ 99
K + AS L + I Y++ LQ +VQ
Sbjct: 206 C-SKSNQASTLDQTIHYMKSLQHQVQ 230
>gi|242076752|ref|XP_002448312.1| hypothetical protein SORBIDRAFT_06g025040 [Sorghum bicolor]
gi|241939495|gb|EES12640.1| hypothetical protein SORBIDRAFT_06g025040 [Sorghum bicolor]
Length = 413
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQ 106
H ++E++RR K+NE F IL+ ++P S K D AS L E I Y++ LQ +VQ+ E S +
Sbjct: 219 HVMSERKRREKLNEMFLILKSLVP-SIHKVDKASILAETIAYLKELQRRVQELESSRE 275
>gi|224081688|ref|XP_002306475.1| predicted protein [Populus trichocarpa]
gi|222855924|gb|EEE93471.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
H+++E+RRRS+INE+ + L+ +IP+S K D AS L E IEY++ LQ +VQ V +
Sbjct: 143 HNLSEKRRRSRINEKMKALQNLIPNS-SKTDKASMLDEAIEYLKLLQLQVQGLSVRF 198
>gi|334183900|ref|NP_001185394.1| transcription factor BEE 3 [Arabidopsis thaliana]
gi|332197393|gb|AEE35514.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 260
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV----- 103
HS+ E+ RR KINER + L++I+P + A+ L E+I YVQ LQ +V+ +
Sbjct: 158 HSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFLSMKLTAA 217
Query: 104 -SYQDWSAE 111
SY D+++E
Sbjct: 218 SSYYDFNSE 226
>gi|449450231|ref|XP_004142867.1| PREDICTED: uncharacterized protein LOC101203008 [Cucumis sativus]
Length = 842
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 37 KNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQE 96
+NS K S H+++E+RRR +INE+ + L+ +IP+S+ K D AS L E IEY++ LQ
Sbjct: 189 RNSSKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSN-KTDKASMLDEAIEYLKQLQL 247
Query: 97 KVQ 99
+VQ
Sbjct: 248 QVQ 250
>gi|34394481|dbj|BAC83694.1| putative intensifier [Oryza sativa Japonica Group]
Length = 630
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 446 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 500
>gi|310793365|gb|EFQ28826.1| helix-loop-helix DNA-binding domain-containing protein [Glomerella
graminicola M1.001]
Length = 395
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV 103
++ HS+ E+RRRSK+NE F +L+ +IP + + L IEYV+YL++ V K +
Sbjct: 172 KTAHSLIERRRRSKMNEEFAVLKGMIPACTGEMHKLAILQASIEYVRYLEDCVAKLKA 229
>gi|300827173|gb|ADK36598.1| Rc protein [Oryza rufipogon]
Length = 667
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 485 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 539
>gi|194396125|gb|ACF60480.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 478
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR KI+ER + L+ ++P+S+ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 327 HSIAERLRREKISERMKNLQVLVPNSN-KADKASMLDEIIDYVKFLQLQVKVLSMS 381
>gi|52075730|dbj|BAD44950.1| regulatory protein B-Peru-like [Oryza sativa Japonica Group]
gi|52077560|dbj|BAD45121.1| regulatory protein B-Peru-like [Oryza sativa Japonica Group]
Length = 370
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 15 DDEFMSKKEAASNITNSNAKDG---KNSDKASVIRSKHSVTEQRRRSKINERFQILREII 71
D E ++ EAA + G N S H ++E+RRR K+NE F IL+ ++
Sbjct: 152 DKEAVAGGEAAQRLLKKVVGGGGAWMNRAAGSCSIKNHVMSERRRREKLNEMFLILKSLV 211
Query: 72 PHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
P D K D AS L E I Y++ L+ +VQ+ E
Sbjct: 212 PSID-KVDKASILSETIAYLKELERRVQELE 241
>gi|307135852|gb|ADN33721.1| serine/threonine-protein kinase [Cucumis melo subsp. melo]
Length = 842
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 37 KNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQE 96
+NS K S H+++E+RRR +INE+ + L+ +IP+S+ K D AS L E IEY++ LQ
Sbjct: 189 RNSSKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSN-KTDKASMLDEAIEYLKQLQL 247
Query: 97 KVQ 99
+VQ
Sbjct: 248 QVQ 250
>gi|300827201|gb|ADK36612.1| Rc protein [Oryza rufipogon]
Length = 666
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 482 ANHVLKERRRREKLNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 536
>gi|226492870|ref|NP_001146411.1| uncharacterized protein LOC100279991 [Zea mays]
gi|219887061|gb|ACL53905.1| unknown [Zea mays]
Length = 254
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 54 QRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPT 113
QRRR +INE+ + L+E+IP+ + K D AS L E IEY++ LQ +VQ +S P
Sbjct: 10 QRRRDRINEKMRALQELIPNCN-KIDKASMLDEAIEYLKTLQLQVQM--MSMGSGLCIPP 66
Query: 114 KLMPWRNSHWRVQNFATQ-PHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDP 172
L+P H ++ A PH + D NS + + + P P
Sbjct: 67 MLLPPAMQHLQIPPAAAHFPHLGMGLGYGMGV----LDMNSAAAAAAAVPFPHMPGAHFP 122
Query: 173 NRDIACKPMDRQPEVANKGISISMPLQGNLP 203
I P+ R G+ I MP + +P
Sbjct: 123 CPMIPGAPLPR-------GLGIGMPARNTMP 146
>gi|73760266|dbj|BAE20058.1| bHLH transcription factor [Lilium hybrid division I]
Length = 680
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 27 NITNSNAKDGKNSDKASVIR----SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTAS 82
N S DG++ + ++ + H + E+RRR K+NERF ILR ++P K D AS
Sbjct: 447 NSLESGVGDGESKFQKGTLQEELSANHVLAERRRREKLNERFIILRSLVPFVT-KMDKAS 505
Query: 83 FLLEVIEYVQYLQEKVQKYE 102
L + IEYV L+ ++Q E
Sbjct: 506 ILGDTIEYVNQLRRRIQDLE 525
>gi|115466888|ref|NP_001057043.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|51090797|dbj|BAD35275.1| bHLH transcription factor PTF1 [Oryza sativa Japonica Group]
gi|113595083|dbj|BAF18957.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|125596339|gb|EAZ36119.1| hypothetical protein OsJ_20430 [Oryza sativa Japonica Group]
gi|215686762|dbj|BAG89612.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR KI+ER + L+ ++P+S+ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 327 HSIAERLRREKISERMKNLQVLVPNSN-KADKASMLDEIIDYVKFLQLQVKVLSMS 381
>gi|29424047|gb|AAO73566.1| bHLH transcription factor PTF1 [Oryza sativa]
Length = 478
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR KI+ER + L+ ++P+S+ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 327 HSIAERLRREKISERMKNLQVLVPNSN-KADKASMLDEIIDYVKFLQLQVKVLSMS 381
>gi|30698967|ref|NP_177524.2| transcription factor BEE 3 [Arabidopsis thaliana]
gi|75299562|sp|Q8GWK7.1|BEE3_ARATH RecName: Full=Transcription factor BEE 3; AltName: Full=Basic
helix-loop-helix protein 50; Short=AtbHLH50; Short=bHLH
50; AltName: Full=Protein Brassinosteroid enhanced
expression 3; AltName: Full=Transcription factor EN 76;
AltName: Full=bHLH transcription factor bHLH050
gi|26452579|dbj|BAC43374.1| putative bHLH transcription factor bHLH050 [Arabidopsis thaliana]
gi|29824159|gb|AAP04040.1| putative helix-loop-helix DNA-binding protein [Arabidopsis
thaliana]
gi|332197392|gb|AEE35513.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 261
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV----- 103
HS+ E+ RR KINER + L++I+P + A+ L E+I YVQ LQ +V+ +
Sbjct: 158 HSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFLSMKLTAA 217
Query: 104 -SYQDWSAE 111
SY D+++E
Sbjct: 218 SSYYDFNSE 226
>gi|326492952|dbj|BAJ90332.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 524
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 7 NREEEDYEDDEFMSKKE-----AASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKIN 61
N + ED E +K+ A S +T A +GK K + +K+ + E+RRR K+N
Sbjct: 292 NYDSEDGRGVEESGRKDGKESNANSTVTGGAAAEGKGKKKG--MPAKNLMAERRRRKKLN 349
Query: 62 ERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKV 98
+R +LR ++P K D AS L + IEY++ L K+
Sbjct: 350 DRLYMLRSVVPKI-SKMDRASILGDAIEYLKELLHKI 385
>gi|297839255|ref|XP_002887509.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
gi|297333350|gb|EFH63768.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV----- 103
HS+ E+ RR KINER + L++I+P + A+ L E+I YVQ LQ +V+ +
Sbjct: 160 HSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFLSMKLTAA 219
Query: 104 -SYQDWSAE 111
SY D+++E
Sbjct: 220 SSYYDFNSE 228
>gi|38345751|emb|CAE03479.2| OSJNBa0065O17.4 [Oryza sativa Japonica Group]
Length = 567
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
H ++E+RRR K+NE F IL+ I+P S K D AS L E I Y++ L+++V++ E S
Sbjct: 393 HVISERRRREKLNEMFLILKSIVP-SIHKVDKASILEETIAYLKVLEKRVKELESS 447
>gi|324983879|gb|ADY68776.1| inducer of CBF expression 1 protein [Eucalyptus camaldulensis]
Length = 523
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 6/120 (5%)
Query: 3 TTKGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINE 62
T +GN + ED SK E ++ NS G K + +K+ + E+RRR K+N+
Sbjct: 295 TDEGNESGKAMED----SKHEGCNSNANSTVTVGDQKGKKKGLPAKNLMAERRRRKKLND 350
Query: 63 RFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSH 122
R +LR ++P S + D AS E I+Y++ + +++ + D + T L P N H
Sbjct: 351 RLYMLRSVVPRS-ARMDRASIFGEAIDYLKEVCKRINNLH-NELDSTPPGTMLPPSTNFH 408
>gi|302793783|ref|XP_002978656.1| hypothetical protein SELMODRAFT_39143 [Selaginella
moellendorffii]
gi|300153465|gb|EFJ20103.1| hypothetical protein SELMODRAFT_39143 [Selaginella
moellendorffii]
Length = 66
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 5/66 (7%)
Query: 34 KDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQY 93
K K S A V H+++E++RR +INER + L+E+IP+S+ K D AS L E IEY++
Sbjct: 2 KGSKRSRAAEV----HNLSERKRRDRINERMKALQELIPNSN-KTDKASMLDEAIEYLKL 56
Query: 94 LQEKVQ 99
LQ ++Q
Sbjct: 57 LQHQLQ 62
>gi|308080104|ref|NP_001183737.1| uncharacterized protein LOC100502330 [Zea mays]
gi|238014262|gb|ACR38166.1| unknown [Zea mays]
gi|413921691|gb|AFW61623.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413921692|gb|AFW61624.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 319
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Query: 2 RTTKGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKIN 61
++ +G R ++ E+ + EA+ + A+ G+ +D HS+ E+ RR +I+
Sbjct: 102 KSRRGKRPRKETEEKSSTDEDEASKGYIHVRARRGQATDS-------HSLAERVRRERIS 154
Query: 62 ERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
ER ++L+ ++P D+ A L E+I YVQ LQ +V+
Sbjct: 155 ERMRMLQALVPGCDKVTGKAMVLDEIINYVQSLQNQVE 192
>gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidopsis thaliana]
gi|334184322|ref|NP_001189559.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|75299660|sp|Q8GZM7.1|PIF1_ARATH RecName: Full=Transcription factor PIF1; AltName: Full=Basic
helix-loop-helix protein 15; Short=AtbHLH15; Short=bHLH
15; AltName: Full=Protein PHY-INTERACTING FACTOR 1;
AltName: Full=Protein PHYTOCHROME INTERACTING FACTOR
3-LIKE 5; AltName: Full=Transcription factor EN 101;
AltName: Full=bHLH transcription factor bHLH015
gi|26051284|gb|AAN78308.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|28372351|dbj|BAC56979.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|330251883|gb|AEC06977.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|330251885|gb|AEC06979.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 478
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 8 REEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQIL 67
+E E DE S+ E A+ S K S H+++E++RR +INER + L
Sbjct: 253 KEREATTTDETESRSEETKQ-----ARVSTTSTKRSRAAEVHNLSERKRRDRINERMKAL 307
Query: 68 REIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+E+IP + K D AS L E IEY++ LQ ++Q
Sbjct: 308 QELIPRCN-KSDKASMLDEAIEYMKSLQLQIQ 338
>gi|440639440|gb|ELR09359.1| hypothetical protein GMDG_03925 [Geomyces destructans 20631-21]
Length = 404
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 39/60 (65%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
++ HS+ E+RRRSK+NE F +L+++IP + + L IEYV+YL++ + + + +
Sbjct: 152 KTAHSLIERRRRSKMNEEFGVLKDMIPACKGEMHKLAILQASIEYVRYLEDCIAQLKSPF 211
>gi|380480201|emb|CCF42572.1| helix-loop-helix DNA-binding domain-containing protein
[Colletotrichum higginsianum]
Length = 397
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV 103
++ HS+ E+RRRSK+NE F +L+ +IP + + L IEYV+YL++ V K +
Sbjct: 158 KTAHSLIERRRRSKMNEEFAVLKGMIPACTGEMHKLAILQASIEYVRYLEDCVAKLKA 215
>gi|449475553|ref|XP_004154488.1| PREDICTED: transcription factor bHLH82-like [Cucumis sativus]
Length = 173
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 7/73 (9%)
Query: 36 GKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIP-------HSDQKRDTASFLLEVI 88
G S K S H+++E+RRR +INE+ + L+E+IP +D + D AS L E I
Sbjct: 50 GSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKLSSFTDSQTDKASMLDEAI 109
Query: 89 EYVQYLQEKVQKY 101
EY++ LQ +VQ +
Sbjct: 110 EYLKTLQLQVQIF 122
>gi|413937341|gb|AFW71892.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 425
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI++R + L+E++P+S+ + D AS L E+IEYV++LQ +V+
Sbjct: 309 HSIAERLRREKISDRMKNLQELVPNSN-RTDKASMLDEIIEYVKFLQLQVK 358
>gi|326511035|dbj|BAJ91865.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 44/64 (68%), Gaps = 5/64 (7%)
Query: 36 GKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQ 95
GK + A V H+++E+RRR KINE+ + L+ ++P+S K D AS L + IEY+++LQ
Sbjct: 46 GKRARAAEV----HNLSEKRRRCKINEKMKALQSLVPNSS-KTDKASMLDDAIEYLKHLQ 100
Query: 96 EKVQ 99
+VQ
Sbjct: 101 LQVQ 104
>gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
gi|297329781|gb|EFH60200.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
Length = 486
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 33 AKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQ 92
A+ S K S H+++E++RR +INER + L+E+IP + K D AS L E IEY++
Sbjct: 282 ARGSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCN-KSDKASMLDEAIEYMK 340
Query: 93 YLQEKVQ 99
LQ ++Q
Sbjct: 341 SLQLQIQ 347
>gi|226496555|ref|NP_001150926.1| bHLH transcription factor GBOF-1 [Zea mays]
gi|195642998|gb|ACG40967.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 306
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 2 RTTKGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKIN 61
R K R ++ EDDE E + A+ G+ +D HS+ E+ RR +I+
Sbjct: 96 RGGKRGRSSKEVEDDE-----EEPKGYIHVRARRGQATDS-------HSLAERVRRERIS 143
Query: 62 ERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
ER ++L+ ++P D+ A L E+I YVQ LQ +V+
Sbjct: 144 ERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQVE 181
>gi|47497385|dbj|BAD19423.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 110
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 5/64 (7%)
Query: 36 GKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQ 95
GK S A V H+++E+RRRS+INE+ + L+ +IP+S K D AS L + IEY++ LQ
Sbjct: 28 GKRSRAAEV----HNLSEKRRRSRINEKMKALQSLIPNSS-KTDKASMLDDAIEYLKQLQ 82
Query: 96 EKVQ 99
+VQ
Sbjct: 83 LQVQ 86
>gi|413952903|gb|AFW85552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P+++ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 205 HSIAERLRRERIAERMKSLQELVPNAN-KTDKASMLDEIIDYVRFLQLQVKVLSMS 259
>gi|527665|gb|AAA80175.1| myc-like regulatory R gene product, partial [Sorghum bicolor]
Length = 146
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 48 KHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQ 106
KH ++E++RR KINE F IL+ ++P S K D AS L E I Y++ LQ VQ+ E S +
Sbjct: 2 KHVMSERKRREKINEMFLILKSLVP-SIHKVDKASILTETIAYLKELQRGVQELESSRE 59
>gi|297798162|ref|XP_002866965.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
gi|297312801|gb|EFH43224.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRRS+INE+ + L+ +IP+S+ K D AS L E IEY++ LQ +VQ
Sbjct: 181 HNLSEKRRRSRINEKMKALQSLIPNSN-KTDKASMLDEAIEYLKQLQLQVQ 230
>gi|414877117|tpg|DAA54248.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 567
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRR +INE+ + L+E+IP+ + K D AS L E IEY++ LQ +VQ
Sbjct: 357 HNLSERRRRDRINEKMRALQELIPNCN-KIDKASMLDEAIEYLKTLQLQVQ 406
>gi|163311850|gb|ABY26938.1| putative anthocyanin transcriptional regulator [Operculina
pteripes]
Length = 661
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K+NERF ILR +IP K AS L + IEYV+ L++++Q+ E
Sbjct: 457 ASHVLAERRRREKLNERFIILRSLIPFVT-KMGKASILGDTIEYVKQLRKRIQELE 511
>gi|48374957|gb|AAT42155.1| b1-1 [Sorghum bicolor]
Length = 509
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
H ++E++RR K+NE F IL+ ++P S K D AS L E I Y++ LQ +VQ+ E S
Sbjct: 315 HVMSERKRREKLNEMFLILKSLVP-SIHKVDKASILAETIAYLKELQRRVQELESS 369
>gi|326518866|dbj|BAJ92594.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 561
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H ++E+RRR K+NE F IL+ ++P S K D AS L E I Y++ L+++V++ E
Sbjct: 386 HVISERRRREKLNEMFLILKSLVP-SIHKVDKASILAETIAYLRELEQRVEELE 438
>gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 8 REEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQIL 67
+E E DE S+ E A+ S K S H+++E++RR +INER + L
Sbjct: 253 KEREATTTDETESRSEETKQ-----ARVSTTSTKRSRAAEVHNLSERKRRDRINERMKAL 307
Query: 68 REIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+E+IP + K D AS L E IEY++ LQ ++Q
Sbjct: 308 QELIPRCN-KSDKASMLDEAIEYMKSLQLQIQ 338
>gi|18568238|gb|AAL75975.1|AF466203_4 regulatory protein [Zea mays]
gi|414585919|tpg|DAA36490.1| TPA: colored plant1 [Zea mays]
Length = 557
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 14 EDDEFMSKKEAASN--ITNSNAKDGKNSDKASVIRSK-HSVTEQRRRSKINERFQILREI 70
E+ + + KK A N+N G + A +K H + E++RR K+NE F +L+ +
Sbjct: 343 EEPQKLLKKAVAGGGAWANTNCGGGGTTVTAQENGAKNHVMLERKRREKLNEMFLVLKSL 402
Query: 71 IPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+P S K D AS L E I Y++ LQ +VQ+ E
Sbjct: 403 VP-SIHKVDKASILAETIAYLKELQRRVQELE 433
>gi|342879590|gb|EGU80835.1| hypothetical protein FOXB_08702 [Fusarium oxysporum Fo5176]
Length = 407
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV 103
++ HS+ E+RRRSK+NE F +L+ +IP S L IEY++YL++ V K +
Sbjct: 181 KTAHSLIERRRRSKMNEEFAVLKGMIPACTGDMHKLSILQASIEYIRYLEDCVSKLKA 238
>gi|449439405|ref|XP_004137476.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449531561|ref|XP_004172754.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 278
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 6/69 (8%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV----- 103
HSV E+ RR KINER + L++I+P + A L E+I YVQ LQ +V+ +
Sbjct: 164 HSVAERIRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAA 223
Query: 104 -SYQDWSAE 111
SY D++++
Sbjct: 224 SSYHDFNSD 232
>gi|414877115|tpg|DAA54246.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 377
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRR +INE+ + L+E+IP+ + K D AS L E IEY++ LQ +VQ
Sbjct: 167 HNLSERRRRDRINEKMRALQELIPNCN-KIDKASMLDEAIEYLKTLQLQVQ 216
>gi|359489230|ref|XP_002275629.2| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 465
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+ +E++RR KIN+R + L++++P+S K D AS L EVIEY++ LQ +VQ
Sbjct: 287 HNQSERKRRDKINQRMKTLQKLVPNS-SKTDKASMLDEVIEYLKQLQAQVQ 336
>gi|297733906|emb|CBI15153.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV 103
H+ +E+RRR +IN++ + L++++P+S K D AS L EVIEY++ LQ +VQ V
Sbjct: 190 HNQSERRRRDRINQKMKTLQKLVPNSS-KTDKASMLDEVIEYLKQLQAQVQMMSV 243
>gi|297597059|ref|NP_001043392.2| Os01g0577300 [Oryza sativa Japonica Group]
gi|125570917|gb|EAZ12432.1| hypothetical protein OsJ_02326 [Oryza sativa Japonica Group]
gi|255673385|dbj|BAF05306.2| Os01g0577300 [Oryza sativa Japonica Group]
Length = 265
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 15 DDEFMSKKEAASNITNSNAKDG---KNSDKASVIRSKHSVTEQRRRSKINERFQILREII 71
D E ++ EAA + G N S H ++E+RRR K+NE F IL+ ++
Sbjct: 47 DKEAVAGGEAAQRLLKKVVGGGGAWMNRAAGSCSIKNHVMSERRRREKLNEMFLILKSLV 106
Query: 72 PHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
P D K D AS L E I Y++ L+ +VQ+ E
Sbjct: 107 PSID-KVDKASILSETIAYLKELERRVQELE 136
>gi|312985092|gb|ADR30705.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985094|gb|ADR30706.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985096|gb|ADR30707.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985098|gb|ADR30708.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985100|gb|ADR30709.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985102|gb|ADR30710.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985104|gb|ADR30711.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
Length = 559
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H ++E+RRR K+NE F IL+ ++P S K D AS L E I Y++ L+++V++ E
Sbjct: 384 HVISERRRREKLNEMFLILKSLVP-SIHKVDKASILAETIAYLRELEQRVEELE 436
>gi|302805681|ref|XP_002984591.1| hypothetical protein SELMODRAFT_29179 [Selaginella
moellendorffii]
gi|300147573|gb|EFJ14236.1| hypothetical protein SELMODRAFT_29179 [Selaginella
moellendorffii]
Length = 64
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 5/66 (7%)
Query: 34 KDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQY 93
K K S A V H+++E++RR +INER + L+E+IP+S+ K D AS L E IEY++
Sbjct: 2 KGSKRSRAAEV----HNLSERKRRDRINERMKALQELIPNSN-KTDKASMLDEAIEYLKL 56
Query: 94 LQEKVQ 99
LQ ++Q
Sbjct: 57 LQHQLQ 62
>gi|218187189|gb|EEC69616.1| hypothetical protein OsI_38990 [Oryza sativa Indica Group]
Length = 379
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 37/51 (72%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H++TE+RRR KI ERF+ L+ ++P D K + AS L + I+Y++ LQ +++
Sbjct: 200 HNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLE 250
>gi|312985106|gb|ADR30712.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985108|gb|ADR30713.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985110|gb|ADR30714.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985112|gb|ADR30715.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985114|gb|ADR30716.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985116|gb|ADR30717.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
Length = 559
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H ++E+RRR K+NE F IL+ ++P S K D AS L E I Y++ L+++V++ E
Sbjct: 384 HVISERRRREKLNEMFLILKSLVP-SIHKVDKASILAETIAYLRELEQRVEELE 436
>gi|312985118|gb|ADR30718.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985120|gb|ADR30719.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985122|gb|ADR30720.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985124|gb|ADR30721.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985126|gb|ADR30722.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985128|gb|ADR30723.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985130|gb|ADR30724.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985132|gb|ADR30725.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985134|gb|ADR30726.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985136|gb|ADR30727.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985138|gb|ADR30728.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985140|gb|ADR30729.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985142|gb|ADR30730.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985144|gb|ADR30731.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985146|gb|ADR30732.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985148|gb|ADR30733.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985150|gb|ADR30734.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985152|gb|ADR30735.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985154|gb|ADR30736.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985156|gb|ADR30737.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985158|gb|ADR30738.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985160|gb|ADR30739.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985162|gb|ADR30740.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985164|gb|ADR30741.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985166|gb|ADR30742.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985168|gb|ADR30743.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985170|gb|ADR30744.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985172|gb|ADR30745.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985174|gb|ADR30746.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985176|gb|ADR30747.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985178|gb|ADR30748.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985180|gb|ADR30749.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985182|gb|ADR30750.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985184|gb|ADR30751.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985186|gb|ADR30752.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985188|gb|ADR30753.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985190|gb|ADR30754.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985192|gb|ADR30755.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985194|gb|ADR30756.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985196|gb|ADR30757.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985198|gb|ADR30758.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985200|gb|ADR30759.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985202|gb|ADR30760.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985204|gb|ADR30761.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985206|gb|ADR30762.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985208|gb|ADR30763.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985210|gb|ADR30764.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985212|gb|ADR30765.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985214|gb|ADR30766.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985216|gb|ADR30767.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985218|gb|ADR30768.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985220|gb|ADR30769.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985222|gb|ADR30770.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985224|gb|ADR30771.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985226|gb|ADR30772.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985228|gb|ADR30773.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
Length = 559
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H ++E+RRR K+NE F IL+ ++P S K D AS L E I Y++ L+++V++ E
Sbjct: 384 HVISERRRREKLNEMFLILKSLVP-SIHKVDKASILAETIAYLRELEQRVEELE 436
>gi|18419937|ref|NP_568010.1| transcription factor SPATULA [Arabidopsis thaliana]
gi|75309699|sp|Q9FUA4.1|SPT_ARATH RecName: Full=Transcription factor SPATULA; AltName: Full=Basic
helix-loop-helix protein 24; Short=AtbHLH24; Short=bHLH
24; AltName: Full=Transcription factor EN 99; AltName:
Full=bHLH transcription factor bHLH024
gi|11245494|gb|AAG33640.1|AF319540_1 SPATULA [Arabidopsis thaliana]
gi|110738410|dbj|BAF01131.1| putative bHLH transcription factor (AtbHLH024) / SPATULA (SPT)
[Arabidopsis thaliana]
gi|111074392|gb|ABH04569.1| At4g36930 [Arabidopsis thaliana]
gi|332661320|gb|AEE86720.1| transcription factor SPATULA [Arabidopsis thaliana]
Length = 373
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRRS+INE+ + L+ +IP+S+ K D AS L E IEY++ LQ +VQ
Sbjct: 202 HNLSEKRRRSRINEKMKALQSLIPNSN-KTDKASMLDEAIEYLKQLQLQVQ 251
>gi|51090798|dbj|BAD35276.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
Length = 401
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR KI+ER + L+ ++P+S+ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 250 HSIAERLRREKISERMKNLQVLVPNSN-KADKASMLDEIIDYVKFLQLQVKVLSMS 304
>gi|295881158|gb|ADG56511.1| basic helix-loop-helix protein [Hordeum vulgare subsp. vulgare]
Length = 559
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H ++E+RRR K+NE F IL+ ++P S K D AS L E I Y++ L+++V++ E
Sbjct: 384 HVISERRRREKLNEMFLILKSLVP-SIHKVDKASILAETIAYLRELEQRVEELE 436
>gi|224137946|ref|XP_002322691.1| predicted protein [Populus trichocarpa]
gi|222867321|gb|EEF04452.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 37/51 (72%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KIN+R ++L+E++P ++ TA L E+I +VQ+LQ +V+
Sbjct: 193 HSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEIINHVQFLQRQVE 243
>gi|15451582|gb|AAK98706.1|AC069158_18 Putative SPATULA [Oryza sativa Japonica Group]
Length = 298
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 5/64 (7%)
Query: 36 GKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQ 95
GK S A V H+++E+RRRS+INE+ + L+ +IP+S K D AS L + IEY++ LQ
Sbjct: 28 GKRSRAAEV----HNLSEKRRRSRINEKMKALQSLIPNSS-KTDKASMLDDAIEYLKQLQ 82
Query: 96 EKVQ 99
+VQ
Sbjct: 83 LQVQ 86
>gi|12324208|gb|AAG52074.1|AC012679_12 putative helix-loop-helix DNA-binding protein; 87971-89290
[Arabidopsis thaliana]
Length = 250
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV----- 103
HS+ E+ RR KINER + L++I+P + A+ L E+I YVQ LQ +V+ +
Sbjct: 147 HSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFLSMKLTAA 206
Query: 104 -SYQDWSAE 111
SY D+++E
Sbjct: 207 SSYYDFNSE 215
>gi|238908347|emb|CAZ40332.1| putative transcription factor [Raphanus sativus]
Length = 645
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H+++E++RR K+N+RF LR +IP S K D S L + IEY+Q LQ +VQ+ E
Sbjct: 445 ANHALSERKRREKLNDRFITLRSMIP-SISKTDKVSILDDTIEYLQELQRRVQELE 499
>gi|125584067|gb|EAZ24998.1| hypothetical protein OsJ_08778 [Oryza sativa Japonica Group]
Length = 320
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 5/64 (7%)
Query: 36 GKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQ 95
GK S A V H+++E+RRRS+INE+ + L+ +IP+S K D AS L + IEY++ LQ
Sbjct: 50 GKRSRAAEV----HNLSEKRRRSRINEKMKALQSLIPNSS-KTDKASMLDDAIEYLKQLQ 104
Query: 96 EKVQ 99
+VQ
Sbjct: 105 LQVQ 108
>gi|30688869|ref|NP_194827.2| transcription factor bHLH69 [Arabidopsis thaliana]
gi|218563529|sp|Q8S3D5.2|BH069_ARATH RecName: Full=Transcription factor bHLH69; AltName: Full=Basic
helix-loop-helix protein 69; Short=AtbHLH69; Short=bHLH
69; AltName: Full=Transcription factor EN 94; AltName:
Full=bHLH transcription factor bHLH069
gi|225898837|dbj|BAH30549.1| hypothetical protein [Arabidopsis thaliana]
gi|332660437|gb|AEE85837.1| transcription factor bHLH69 [Arabidopsis thaliana]
Length = 310
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P+ + K D AS L E+I+YV++LQ +V+ +S
Sbjct: 141 HSIAERLRRERIAERMKSLQELVPNGN-KTDKASMLDEIIDYVKFLQLQVKVLSMS 195
>gi|222080621|gb|ACM41587.1| bHLH transcription factor MYC4 [Catharanthus roseus]
Length = 259
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 41/52 (78%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQK 100
S+ E+ RR++I++R + L+E++P+ D++ +TA L E +EYV++LQ+++Q+
Sbjct: 194 RSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQKQIQE 245
>gi|119655907|gb|ABL86246.1| BHLHogu [Brassica rapa subsp. chinensis]
Length = 122
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KIN R ++LRE++P D+ + TA L E+I +VQ LQ +V+
Sbjct: 44 HSLAERARREKINARMKLLRELVPGCDKIQGTALVLDEIINHVQSLQRQVE 94
>gi|20127075|gb|AAM10956.1|AF488601_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P+ + K D AS L E+I+YV++LQ +V+ +S
Sbjct: 141 HSIAERLRRERIAERMKSLQELVPNGN-KTDKASMLDEIIDYVKFLQLQVKVLSMS 195
>gi|125541527|gb|EAY87922.1| hypothetical protein OsI_09345 [Oryza sativa Indica Group]
Length = 320
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 5/64 (7%)
Query: 36 GKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQ 95
GK S A V H+++E+RRRS+INE+ + L+ +IP+S K D AS L + IEY++ LQ
Sbjct: 50 GKRSRAAEV----HNLSEKRRRSRINEKMKALQSLIPNSS-KTDKASMLDDAIEYLKQLQ 104
Query: 96 EKVQ 99
+VQ
Sbjct: 105 LQVQ 108
>gi|449447621|ref|XP_004141566.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
gi|449522500|ref|XP_004168264.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
Length = 244
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 41/51 (80%)
Query: 50 SVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQK 100
S+ E+ RR++I++R + L+E++P+ D++ +TA L E +EYV++LQ+++Q+
Sbjct: 180 SIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQE 230
>gi|346978325|gb|EGY21777.1| hypothetical protein VDAG_03217 [Verticillium dahliae VdLs.17]
Length = 397
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQK 100
++ HS+ E+RRRSK+NE F +L+ +IP + + L IEYV+YL++ V K
Sbjct: 161 KTAHSLIERRRRSKMNEEFAVLKGMIPACTGEMHKLAILQASIEYVRYLEDCVSK 215
>gi|356541789|ref|XP_003539355.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 381
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRR +INE+ + L+ +IP+S+ K D AS L E IEY++ LQ +VQ
Sbjct: 145 HNLSEKRRRGRINEKMKALQNLIPNSN-KTDKASMLDEAIEYLKQLQLQVQ 194
>gi|171687825|ref|XP_001908853.1| hypothetical protein [Podospora anserina S mat+]
gi|170943874|emb|CAP69526.1| unnamed protein product [Podospora anserina S mat+]
Length = 333
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
++ HS+ E+RRRSK+NE F +L+ +IP + + L IEYV+YL++ V + +
Sbjct: 162 KTAHSLIERRRRSKMNEEFAVLKSLIPACTGEMHKLAILQASIEYVRYLEDCVSQLKAQR 221
Query: 106 QDWSAE 111
+ ++E
Sbjct: 222 SNTTSE 227
>gi|167999578|ref|XP_001752494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696394|gb|EDQ82733.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 38 NSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEK 97
N A+ SV + RR KI+ER ++L ++IP + K DTA+ L E IEYV++LQ +
Sbjct: 380 NGKPAATSVEPQSVAARHRRKKISERIRVLEKLIPGGN-KMDTATMLDEAIEYVKFLQLQ 438
Query: 98 VQKYE 102
VQ E
Sbjct: 439 VQILE 443
>gi|451998960|gb|EMD91423.1| hypothetical protein COCHEDRAFT_1224580 [Cochliobolus
heterostrophus C5]
Length = 424
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 9/80 (11%)
Query: 20 SKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHS-DQKR 78
+KK+ ASN T + K + ++ HS+ E+RRRSK+NE F +L+++IP Q+
Sbjct: 137 AKKKQASNTTAAGRKIAR--------KTAHSLIERRRRSKMNEEFGVLKDMIPACRGQEM 188
Query: 79 DTASFLLEVIEYVQYLQEKV 98
+ L IEY++YL++ V
Sbjct: 189 HKLAILQASIEYMRYLEQCV 208
>gi|77556977|gb|ABA99773.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 266
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 37/51 (72%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H++TE+RRR KI ERF+ L+ ++P D K + AS L + I+Y++ LQ +++
Sbjct: 87 HNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLE 137
>gi|242095026|ref|XP_002438003.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
gi|241916226|gb|EER89370.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
Length = 489
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR KI++R + L++++P+S+ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 331 HSIAERLRREKISDRMKSLQDLVPNSN-KADKASMLDEIIDYVKFLQLQVKVLSMS 385
>gi|156062882|ref|XP_001597363.1| hypothetical protein SS1G_01557 [Sclerotinia sclerotiorum 1980]
gi|154696893|gb|EDN96631.1| hypothetical protein SS1G_01557 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 375
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 16 DEFMSKKEAASNI---TNSNAKDGKNSDKASVI------RSKHSVTEQRRRSKINERFQI 66
DE M+ E + I NA K SV ++ HS+ E+RRRSK+NE F +
Sbjct: 112 DETMNSPEENTKIGGKATPNAPKKKQPSSTSVAGRKIARKTAHSLIERRRRSKMNEEFGV 171
Query: 67 LREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV 103
L+++IP + + L I+YV+YL++ V K +
Sbjct: 172 LKDMIPACTGEMHKLAILQASIDYVKYLEDCVSKLKA 208
>gi|357455379|ref|XP_003597970.1| Transcription factor bHLH25 [Medicago truncatula]
gi|355487018|gb|AES68221.1| Transcription factor bHLH25 [Medicago truncatula]
Length = 295
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Query: 21 KKEAASNITNSNAKDGKNSDKA-SVIRSK-----HSVTEQRRRSKINERFQILREIIPHS 74
KK +SN+ + +G K +IRSK H++ E+RRR ++ +F L IIP S
Sbjct: 87 KKRTSSNLNFESKANGTGLAKEEKIIRSKSKTLFHTLAERRRRLELAHKFTELSAIIPRS 146
Query: 75 DQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNS 121
+K D AS + I YV+ LQ++V + EV EP L+ NS
Sbjct: 147 -KKTDKASIVQGAINYVEKLQKRVMELEVQQNKRGKEPIILLNKENS 192
>gi|225457285|ref|XP_002284441.1| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 423
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV 103
H+ +E+RRR +IN++ + L++++P+S K D AS L EVIEY++ LQ +VQ V
Sbjct: 228 HNQSERRRRDRINQKMKTLQKLVPNSS-KTDKASMLDEVIEYLKQLQAQVQMMSV 281
>gi|326498007|dbj|BAJ94866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 481
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR KI+ER + L++++P+S+ K D +S L E+I+YV++LQ +V+ +S
Sbjct: 331 HSIAERLRREKISERMKNLQDLVPNSN-KADKSSMLDEIIDYVKFLQLQVKVLSMS 385
>gi|390979910|gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]
Length = 330
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 15/131 (11%)
Query: 16 DEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSD 75
DE + +EA + + A+ G+ +D HS+ E+ RR KI+ER +IL+ ++P D
Sbjct: 138 DEKKANEEAPTGYIHVRARRGQATDS-------HSLAERVRREKISERMKILQSLVPGCD 190
Query: 76 QKRDTASFLLEVIEYVQYLQEKVQKYEVS-------YQDWSAEPTKLMPWRNSHWRVQNF 128
+ A L E+I YVQ LQ +V+ + Y D+ + LM R +
Sbjct: 191 KVTGKALMLDEIINYVQSLQNQVEFLSMKLTSLNPMYYDFGMDLDALM-VRPDDQSLSGL 249
Query: 129 ATQPHAIKNGS 139
TQ I+ GS
Sbjct: 250 ETQMANIQQGS 260
>gi|218195917|gb|EEC78344.1| hypothetical protein OsI_18091 [Oryza sativa Indica Group]
Length = 339
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 13/134 (9%)
Query: 13 YEDDEFMSKKEAA-----SNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQIL 67
++DD KEAA + + A+ G+ +D HS+ E+ RR KI+ER ++L
Sbjct: 157 HDDDVKKKAKEAAGGEPPAGYIHVRARRGQATDS-------HSLAERVRREKISERMKML 209
Query: 68 REIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHWRV-Q 126
+ ++P D+ A L E+I YVQ LQ +V+ + + + P + H V +
Sbjct: 210 QSLVPGCDKVTGKALMLDEIISYVQSLQNQVEFLSMKLASLNPLMYEFGPGIDMHPDVLR 269
Query: 127 NFATQPHAIKNGSG 140
A PH + G
Sbjct: 270 QLAKMPHEMVQCMG 283
>gi|358248852|ref|NP_001239951.1| uncharacterized protein LOC100817978 [Glycine max]
gi|255641230|gb|ACU20892.1| unknown [Glycine max]
Length = 244
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 7/83 (8%)
Query: 23 EAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTAS 82
EA S +S++ DG S AS K+ V+E+ RR K+NER LR ++P+ K D AS
Sbjct: 30 EALSGYYDSSSPDGAASSAAS----KNIVSERNRRKKLNERLFALRSVVPNIS-KMDKAS 84
Query: 83 FLLEVIEYVQYL--QEKVQKYEV 103
+ + IEY+Q+L QEK+ + E+
Sbjct: 85 IIKDAIEYIQHLHEQEKIIQAEI 107
>gi|224058495|ref|XP_002299530.1| predicted protein [Populus trichocarpa]
gi|222846788|gb|EEE84335.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 44/70 (62%), Gaps = 7/70 (10%)
Query: 38 NSDKASVIR-------SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEY 90
NS+K V R + H+++E+++R K+N+RF IL+ I+P + D S L E IEY
Sbjct: 414 NSNKVVVGRPEADENGASHALSERKQREKLNKRFMILKSIVPSISKVVDKVSILDETIEY 473
Query: 91 VQYLQEKVQK 100
+Q L+ KV++
Sbjct: 474 LQELERKVEE 483
>gi|168040637|ref|XP_001772800.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675877|gb|EDQ62367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 39/51 (76%)
Query: 50 SVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQK 100
S+ E+ RR KI+ER + L+E++P+SD++ +TA L + +EYV+ LQ +VQ+
Sbjct: 391 SIAERVRRGKISERMKKLQELVPNSDRQTNTADMLDDAVEYVKQLQLQVQE 441
>gi|145334165|ref|NP_001078463.1| transcription factor bHLH127 [Arabidopsis thaliana]
gi|75296238|sp|Q7XHI7.1|BH127_ARATH RecName: Full=Transcription factor bHLH127; AltName: Full=Basic
helix-loop-helix protein 127; Short=AtbHLH127;
Short=bHLH 127; AltName: Full=bHLH transcription factor
bHLH127
gi|33111973|emb|CAE12173.1| putative bHLH127 transcription factor [Arabidopsis thaliana]
gi|332660148|gb|AEE85548.1| transcription factor bHLH127 [Arabidopsis thaliana]
Length = 307
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 24 AASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASF 83
+A I + G S K S H++ E+RRR KINER + L+++IP + K S
Sbjct: 130 SAPRIQGTEEARGSTSRKRSRAAEMHNLAERRRREKINERMKTLQQLIPRCN-KSTKVSM 188
Query: 84 LLEVIEYVQYLQEKVQKY 101
L +VIEYV+ L+ ++ ++
Sbjct: 189 LEDVIEYVKSLEMQINQF 206
>gi|326506812|dbj|BAJ91447.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510963|dbj|BAJ91829.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 353
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 17/128 (13%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
HS+ E+ RR +I+ER + L+E++P D+ A L E+I YVQ LQ++V+ +S +
Sbjct: 161 HSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQVE--FLSMKIA 218
Query: 109 SAEPTKLMPWRNSHWRVQNFATQPHAIKNGSGPGSMFP--------GKFDDNSISMSPTM 160
+A P ++ + + + GP + P G+ D + + MS T
Sbjct: 219 AANPV-------VNFNIVDDLFGGRRMSQPCGPAAALPAMTLPMHHGQLDPSCLQMSNTA 271
Query: 161 LTSTQTPV 168
+ Q P
Sbjct: 272 MQQMQQPA 279
>gi|451848401|gb|EMD61707.1| hypothetical protein COCSADRAFT_163131 [Cochliobolus sativus
ND90Pr]
Length = 424
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 9/79 (11%)
Query: 21 KKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHS-DQKRD 79
KK+ ASN T + K + ++ HS+ E+RRRSK+NE F +L+++IP Q+
Sbjct: 138 KKKQASNTTAAGRKIAR--------KTAHSLIERRRRSKMNEEFGVLKDMIPACRGQEMH 189
Query: 80 TASFLLEVIEYVQYLQEKV 98
+ L IEY++YL++ V
Sbjct: 190 KLAILQASIEYMRYLEQCV 208
>gi|218202150|gb|EEC84577.1| hypothetical protein OsI_31377 [Oryza sativa Indica Group]
Length = 414
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR +I ER + L+E++P+++ K D AS L E+I+YV++LQ +V+
Sbjct: 170 HSIAERLRRERIAERMKALQELVPNAN-KTDKASMLDEIIDYVKFLQLQVK 219
>gi|218187187|gb|EEC69614.1| hypothetical protein OsI_38988 [Oryza sativa Indica Group]
Length = 271
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+TE++RR KINE + L++++P D+ + AS L + I Y++ LQ+ VQ V
Sbjct: 123 HSLTERKRRCKINENLKTLQQLVPGCDKSNNQASTLDKTIRYMKSLQQHVQAMSVG 178
>gi|297798868|ref|XP_002867318.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313154|gb|EFH43577.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P+ + K D AS L E+I+YV++LQ +V+ +S
Sbjct: 139 HSIAERLRRERIAERMKSLQELVPNGN-KTDKASMLDEIIDYVKFLQLQVKVLSMS 193
>gi|400601421|gb|EJP69064.1| helix-loop-helix DNA-binding domain-containing protein [Beauveria
bassiana ARSEF 2860]
Length = 438
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
++ HS+ E+RRRSK+NE F +L+++IP + L IEY++YL++ V + + +
Sbjct: 199 KTAHSLIERRRRSKMNEEFGVLKDMIPACTGDMHKLAILQASIEYIRYLEDCVSQLKAQH 258
>gi|30695836|ref|NP_850745.1| transcription factor bHLH60 [Arabidopsis thaliana]
gi|6729523|emb|CAB67608.1| putative protein [Arabidopsis thaliana]
gi|22655000|gb|AAM98091.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|27764962|gb|AAO23602.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|332646182|gb|AEE79703.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 379
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KIN R ++L+E++P D+ + TA L E+I +VQ LQ +V+
Sbjct: 215 HSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQVE 265
>gi|13346180|gb|AAK19612.1|AF336279_1 GHDEL61 [Gossypium hirsutum]
Length = 624
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
H ++E+RRR KINER IL+ ++P ++ K D S L + IEY+Q L+ +V++ E
Sbjct: 425 HVLSERRRREKINERLMILKSLVP-TNSKADKVSILDDTIEYLQDLERRVEELECC 479
>gi|358395957|gb|EHK45344.1| hypothetical protein TRIATDRAFT_198898 [Trichoderma atroviride IMI
206040]
Length = 403
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV 103
++ HS+ E+RRRSK+NE F +L+ +IP + + L IEYV+YL++ V K +
Sbjct: 182 KTAHSLIERRRRSKMNEEFALLKSMIPACTGEMHKLAILQASIEYVRYLEDCVAKLKA 239
>gi|73760264|dbj|BAE20057.1| bHLH transcription factor [Lilium hybrid division I]
Length = 686
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H ++E+RRR K+NE+F +L+ ++P S K D AS L + IEY++ LQ ++++ E
Sbjct: 476 ASHVISERRRREKLNEKFLVLKSLVP-SITKVDKASILGDTIEYLKELQRRIEELE 530
>gi|20127060|gb|AAM10949.1|AF488593_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 379
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KIN R ++L+E++P D+ + TA L E+I +VQ LQ +V+
Sbjct: 215 HSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQVE 265
>gi|357449601|ref|XP_003595077.1| Transcription factor bHLH [Medicago truncatula]
gi|355484125|gb|AES65328.1| Transcription factor bHLH [Medicago truncatula]
Length = 244
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 23 EAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTAS 82
EA S +S++ DG S S + SK+ V+E+ RR K+NER LR ++P+ K D AS
Sbjct: 30 EALSAYYDSSSPDGAAS---SGVSSKNIVSERNRRKKLNERLFALRAVVPNI-SKMDKAS 85
Query: 83 FLLEVIEYVQYL--QEKVQKYEV 103
+ + IEY+Q L QEKV + E+
Sbjct: 86 IIKDAIEYIQLLHEQEKVIQAEI 108
>gi|154299982|ref|XP_001550408.1| hypothetical protein BC1G_11180 [Botryotinia fuckeliana B05.10]
gi|347832041|emb|CCD47738.1| similar to transcription factor bHLH [Botryotinia fuckeliana]
Length = 375
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV 103
++ HS+ E+RRRSK+NE F +L+++IP + + L I+YV+YL++ V K +
Sbjct: 151 KTAHSLIERRRRSKMNEEFGVLKDMIPACTGEMHKLAILQASIDYVRYLEDCVSKLKA 208
>gi|357137204|ref|XP_003570191.1| PREDICTED: uncharacterized protein LOC100822236 [Brachypodium
distachyon]
Length = 361
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 21 KKEAASNITNSNAKDGKNSDKASVIRSK------HSVTEQRRRSKINERFQILREIIPHS 74
K + A+ + A G+ +D V + HS+ E+ RR +I+ER + L+E++P
Sbjct: 138 KGDVAAQKQDPRAAGGQKTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGC 197
Query: 75 DQKRDTASFLLEVIEYVQYLQEKVQ 99
D+ A L E+I YVQ LQ++V+
Sbjct: 198 DKVTGKAGMLDEIINYVQSLQKQVE 222
>gi|356503537|ref|XP_003520564.1| PREDICTED: transcription factor TT8-like [Glycine max]
Length = 577
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 30 NSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIE 89
++N GK + S + H + E+ RR K+NERF ILR ++P S + D AS L + IE
Sbjct: 402 HTNWLKGKGT---SPYETSHVMAERHRREKLNERFLILRSMVP-SVTRMDKASILGDTIE 457
Query: 90 YVQYLQEKVQKYE 102
Y++ L++K++ E
Sbjct: 458 YIKQLRDKIESLE 470
>gi|320589151|gb|EFX01613.1| hlh transcription factor [Grosmannia clavigera kw1407]
Length = 748
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
++ HS+ E+RRRSK+NE F +L+ +IP + + L IEYV+YL++ V + +
Sbjct: 203 KTAHSLIERRRRSKMNEEFAVLKNMIPACTGEMHKLAILQASIEYVRYLEDCVASLKAHH 262
Query: 106 Q 106
+
Sbjct: 263 E 263
>gi|357142621|ref|XP_003572635.1| PREDICTED: uncharacterized protein LOC100834217 [Brachypodium
distachyon]
Length = 479
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR KI++R + L+E++P+S+ K D AS L E+IEY+++LQ + + +S
Sbjct: 293 HSIAERLRREKISDRMKNLQELVPNSN-KTDKASMLEEIIEYIKFLQLQTKVLSMS 347
>gi|356495899|ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 458
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 39 SDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKV 98
S K S + H+ +E++RR KIN+R + L++++P+S K D AS L EVIEY++ LQ ++
Sbjct: 265 STKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSS-KSDKASMLDEVIEYLKQLQAQL 323
Query: 99 Q 99
Q
Sbjct: 324 Q 324
>gi|20127012|gb|AAM10933.1|AF488561_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 399
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 39 SDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKV 98
S K S + H+ +E++RR KIN+R + L++++P+S K D AS L EVIEY++ LQ +V
Sbjct: 208 STKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNS-SKTDKASMLDEVIEYLKQLQAQV 266
>gi|30678541|ref|NP_191916.3| transcription factor UNE10 [Arabidopsis thaliana]
gi|75299638|sp|Q8GZ38.1|UNE10_ARATH RecName: Full=Transcription factor UNE10; AltName: Full=Basic
helix-loop-helix protein 16; Short=AtbHLH16; Short=bHLH
16; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 10;
AltName: Full=Transcription factor EN 108; AltName:
Full=bHLH transcription factor bHLH016
gi|26449558|dbj|BAC41905.1| putative bHLH transcription factor bHLH016 [Arabidopsis thaliana]
gi|109134123|gb|ABG25060.1| At4g00050 [Arabidopsis thaliana]
gi|332656418|gb|AEE81818.1| transcription factor UNE10 [Arabidopsis thaliana]
Length = 399
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 39 SDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKV 98
S K S + H+ +E++RR KIN+R + L++++P+S K D AS L EVIEY++ LQ +V
Sbjct: 208 STKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNS-SKTDKASMLDEVIEYLKQLQAQV 266
>gi|363808336|ref|NP_001242250.1| transcription factor bHLH48-like [Glycine max]
gi|256002927|gb|ACU52707.1| bHLH transcription factor PTF1 [Glycine max]
Length = 366
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KIN R ++L+E++P D+ TA L E+I +VQ LQ +V+
Sbjct: 211 HSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSLQRQVE 261
>gi|2980768|emb|CAA18195.1| putative protein [Arabidopsis thaliana]
gi|7270000|emb|CAB79816.1| putative protein [Arabidopsis thaliana]
Length = 367
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P+ + K D AS L E+I+YV++LQ +V+ +S
Sbjct: 198 HSIAERLRRERIAERMKSLQELVPNGN-KTDKASMLDEIIDYVKFLQLQVKVLSMS 252
>gi|212724016|ref|NP_001131264.1| uncharacterized protein LOC100192577 [Zea mays]
gi|194691028|gb|ACF79598.1| unknown [Zea mays]
gi|323388613|gb|ADX60111.1| bHLH transcription factor [Zea mays]
Length = 438
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
HS+ E+ RR KI++R + L++++P+S+ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 293 HSIAERLRREKISDRMKNLQDLVPNSN-KADKASMLDEIIDYVKFLQLQVKVLSMS---R 348
Query: 109 SAEPTKLMPWRNSHWRVQNFATQP 132
P ++P + + + + QP
Sbjct: 349 VGAPGAVLPLL-TESKTEGYHGQP 371
>gi|224095171|ref|XP_002334760.1| predicted protein [Populus trichocarpa]
gi|222874520|gb|EEF11651.1| predicted protein [Populus trichocarpa]
Length = 70
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 28/35 (80%)
Query: 38 NSDKASVIRSKHSVTEQRRRSKINERFQILREIIP 72
N KA+ RS+HS TEQRRRSKINERFQ LR ++P
Sbjct: 35 NELKANANRSRHSETEQRRRSKINERFQALRNLVP 69
>gi|46390356|dbj|BAD15821.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
gi|215768923|dbj|BAH01152.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623080|gb|EEE57212.1| hypothetical protein OsJ_07173 [Oryza sativa Japonica Group]
Length = 524
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR KI++R + L+E++P+S+ K + AS L E+I+YV++LQ +V+ +S
Sbjct: 325 HSIAERLRREKISDRMKDLQELVPNSN-KTNKASMLDEIIDYVKFLQLQVKVLSMS 379
>gi|413943961|gb|AFW76610.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 473
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR KI++R + L++++P+S+ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 328 HSIAERLRREKISDRMKNLQDLVPNSN-KADKASMLDEIIDYVKFLQLQVKVLSMS 382
>gi|413954819|gb|AFW87468.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 372
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 10/95 (10%)
Query: 5 KGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERF 64
KG EE + +K A ++ A+ G+ +D HS+ E+ RR KIN R
Sbjct: 170 KGKTAEEKLAGGDGDDEKPAYVHV---RARRGQATDS-------HSLAERARREKINARM 219
Query: 65 QILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
++L+E++P + TA L E+I +VQ LQ +V+
Sbjct: 220 ELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVE 254
>gi|115345831|gb|ABI95371.1| PTF1 [Triticum aestivum]
Length = 480
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER + L++++P+S+ K D +S L E+I+YV++LQ +V+
Sbjct: 330 HSIAERLRREKISERMKNLQDLVPNSN-KADKSSMLDEIIDYVKFLQLQVK 379
>gi|4006880|emb|CAB16798.1| putative protein [Arabidopsis thaliana]
gi|7270642|emb|CAB80359.1| putative protein [Arabidopsis thaliana]
Length = 415
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRRS+INE+ + L+ +IP+S+ K D AS L E IEY++ LQ +VQ
Sbjct: 202 HNLSEKRRRSRINEKMKALQSLIPNSN-KTDKASMLDEAIEYLKQLQLQVQ 251
>gi|297844782|ref|XP_002890272.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
gi|297336114|gb|EFH66531.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
Length = 1143
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV----- 103
HS+ E+ RR KINER + L++++P + A+ L E+I YVQ LQ +V+ +
Sbjct: 1039 HSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVEFLSMKLNAA 1098
Query: 104 -SYQDWSAE 111
S+ D+S+E
Sbjct: 1099 SSFYDFSSE 1107
>gi|356504821|ref|XP_003521193.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 372
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KIN R ++L+E++P D+ TA L E+I +VQ LQ +V+
Sbjct: 217 HSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSLQRQVE 267
>gi|1420924|gb|AAB03841.1| IN1 [Zea mays]
Length = 685
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 45 IRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ + H + E+RRR K+NE F +LR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 465 LSASHVLKERRRREKLNEGFAMLRSLVPFVT-KMDRASILGDTIEYVKQLRRRIQELE 521
>gi|527661|gb|AAA80170.1| myc-like regulatory R gene product, partial [Phyllostachys acuta]
Length = 134
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 48 KHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
KH ++E+RRR K+NE F IL+ ++P S K D AS L E I Y++ L+++V++ E
Sbjct: 2 KHVMSERRRREKLNEMFLILKSLVP-SIHKVDKASILAETIAYLKELEQRVEELE 55
>gi|453089137|gb|EMF17177.1| hypothetical protein SEPMUDRAFT_129980 [Mycosphaerella populorum
SO2202]
Length = 416
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Query: 22 KEAASNITNSNAKDGKNSDKASVI----------RSKHSVTEQRRRSKINERFQILREII 71
K A++ T S AK G A+ ++ HS+ E+RRRSK+NE F +L+E+I
Sbjct: 120 KAASAGDTRSAAKAGSKRKSATAGTTAAGRKIARKTAHSLIERRRRSKMNEEFGVLKEMI 179
Query: 72 PHS-DQKRDTASFLLEVIEYVQYLQEKVQKYEV 103
P Q+ + L IEY++YL++ V + +
Sbjct: 180 PACQGQEMHKLAILQASIEYLRYLEQCVAELKT 212
>gi|312281897|dbj|BAJ33814.1| unnamed protein product [Thellungiella halophila]
Length = 375
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KIN R ++L+E++P D+ + TA L E+I +VQ LQ +V+
Sbjct: 211 HSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQVE 261
>gi|242075762|ref|XP_002447817.1| hypothetical protein SORBIDRAFT_06g016380 [Sorghum bicolor]
gi|241939000|gb|EES12145.1| hypothetical protein SORBIDRAFT_06g016380 [Sorghum bicolor]
Length = 572
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
H ++E++RR K+NE F IL+ ++P S QK D S L E I Y++ LQ KVQ+ + S
Sbjct: 397 HVMSERKRREKLNEMFLILKLLVP-SIQKVDKVSILAETIAYLKELQRKVQELKSS 451
>gi|357449603|ref|XP_003595078.1| Transcription factor bHLH [Medicago truncatula]
gi|355484126|gb|AES65329.1| Transcription factor bHLH [Medicago truncatula]
Length = 185
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 23 EAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTAS 82
EA S +S++ DG S S + SK+ V+E+ RR K+NER LR ++P+ K D AS
Sbjct: 30 EALSAYYDSSSPDGAAS---SGVSSKNIVSERNRRKKLNERLFALRAVVPNI-SKMDKAS 85
Query: 83 FLLEVIEYVQYL--QEKVQKYEV 103
+ + IEY+Q L QEKV + E+
Sbjct: 86 IIKDAIEYIQLLHEQEKVIQAEI 108
>gi|162460249|ref|NP_001105867.1| bHLH transcription factor PTF1 [Zea mays]
gi|93359745|gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays]
Length = 481
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR KI++R + L++++P+S+ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 331 HSIAERLRREKISDRMKNLQDLVPNSN-KADKASMLDEIIDYVKFLQLQVKVLSMS 385
>gi|195616290|gb|ACG29975.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 481
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR KI++R + L++++P+S+ K D AS L E+I+YV++LQ +V+ +S
Sbjct: 331 HSIAERLRREKISDRMKNLQDLVPNSN-KADKASMLDEIIDYVKFLQLQVKVLSMS 385
>gi|222641577|gb|EEE69709.1| hypothetical protein OsJ_29376 [Oryza sativa Japonica Group]
Length = 410
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKV 98
HS+ E+ RR +I ER + L+E++P+++ K D AS L E+I+YV++LQ +V
Sbjct: 261 HSIAERLRRERIAERMKALQELVPNAN-KTDKASMLDEIIDYVKFLQLQV 309
>gi|225458914|ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
gi|302142156|emb|CBI19359.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L+E++P ++ A L E+I YVQ LQ++V+
Sbjct: 276 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 326
>gi|30688981|ref|NP_850368.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|75304461|sp|Q8VZ02.1|BH048_ARATH RecName: Full=Transcription factor bHLH48; AltName: Full=Basic
helix-loop-helix protein 48; Short=AtbHLH48; Short=bHLH
48; AltName: Full=Transcription factor EN 97; AltName:
Full=bHLH transcription factor bHLH048
gi|17529250|gb|AAL38852.1| unknown protein [Arabidopsis thaliana]
gi|20465971|gb|AAM20171.1| unknown protein [Arabidopsis thaliana]
gi|51971465|dbj|BAD44397.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|330255008|gb|AEC10102.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 327
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KIN R ++L+E++P D+ + TA L E+I +VQ LQ +V+
Sbjct: 196 HSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQVE 246
>gi|125539931|gb|EAY86326.1| hypothetical protein OsI_07700 [Oryza sativa Indica Group]
Length = 524
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR KI++R + L+E++P+S+ K + AS L E+I+YV++LQ +V+ +S
Sbjct: 325 HSIAERLRREKISDRMKDLQELVPNSN-KTNKASMLDEIIDYVKFLQLQVKVLSMS 379
>gi|297824189|ref|XP_002879977.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
gi|297325816|gb|EFH56236.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
Length = 326
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KIN R ++L+E++P D+ + TA L E+I +VQ LQ +V+
Sbjct: 195 HSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQVE 245
>gi|449509268|ref|XP_004163540.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 402
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L+E++P ++ A L E+I YVQ LQ++V+
Sbjct: 243 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 293
>gi|255547289|ref|XP_002514702.1| DNA binding protein, putative [Ricinus communis]
gi|223546306|gb|EEF47808.1| DNA binding protein, putative [Ricinus communis]
Length = 440
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV 103
H+ +E+RRR +IN++ + L++++P++ K D AS L EVIEY++ LQ +VQ V
Sbjct: 252 HNQSERRRRDRINQKMKALQKLVPNAS-KTDKASMLDEVIEYLKQLQAQVQAMSV 305
>gi|22329164|ref|NP_195179.2| transcription factor bHLH63 [Arabidopsis thaliana]
gi|75299602|sp|Q8GY61.1|BH063_ARATH RecName: Full=Transcription factor bHLH63; AltName: Full=Basic
helix-loop-helix protein 63; Short=AtbHLH63; Short=bHLH
63; AltName: Full=Transcription factor EN 84; AltName:
Full=bHLH transcription factor bHLH063
gi|26450757|dbj|BAC42487.1| putative bHLH transcription factor bHLH063 [Arabidopsis thaliana]
gi|28950907|gb|AAO63377.1| At4g34530 [Arabidopsis thaliana]
gi|332660989|gb|AEE86389.1| transcription factor bHLH63 [Arabidopsis thaliana]
Length = 335
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 27 NITNSNAKDGKNSDKASVIRSK---------HSVTEQRRRSKINERFQILREIIPHSDQK 77
N +N ++K K +K I + HS+ E+ RR KI+ER + L++++P D+
Sbjct: 152 NFSNDSSKVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKI 211
Query: 78 RDTASFLLEVIEYVQYLQEKVQ 99
A L E+I YVQ LQ +++
Sbjct: 212 TGKAGMLDEIINYVQSLQRQIE 233
>gi|429859550|gb|ELA34329.1| helix-loop-helix dna-binding domain-containing protein
[Colletotrichum gloeosporioides Nara gc5]
Length = 371
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 14/129 (10%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE---- 102
+K + E+RRRSK+NE F +L+ +IP + + L IEYV+YL++ V K +
Sbjct: 137 TKEHLIERRRRSKMNEEFAVLKGMIPACTGEMHKLAILQASIEYVRYLEDCVAKLKAQRD 196
Query: 103 ----VSYQDWSAE-PTKLMPWRNSHWRVQNFATQPHAIK-NGS-GPGSMFPGKFDDN--- 152
VS + + P+ PW + V + +P ++ GS P FP + +
Sbjct: 197 VSEGVSPTESGLQTPSGRDPWGSLPQFVPKYQQEPDDVEMTGSEAPSPTFPAQHSRSQQP 256
Query: 153 SISMSPTML 161
S+S SP +L
Sbjct: 257 SVSPSPALL 265
>gi|20127066|gb|AAM10952.1|AF488596_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 335
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 27 NITNSNAKDGKNSDKASVIRSK---------HSVTEQRRRSKINERFQILREIIPHSDQK 77
N +N ++K K +K I + HS+ E+ RR KI+ER + L++++P D+
Sbjct: 152 NFSNDSSKVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKI 211
Query: 78 RDTASFLLEVIEYVQYLQEKVQ 99
A L E+I YVQ LQ +++
Sbjct: 212 TGKAGMLDEIINYVQSLQRQIE 233
>gi|21539493|gb|AAM53299.1| unknown protein [Arabidopsis thaliana]
Length = 335
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 27 NITNSNAKDGKNSDKASVIRSK---------HSVTEQRRRSKINERFQILREIIPHSDQK 77
N +N ++K K +K I + HS+ E+ RR KI+ER + L++++P D+
Sbjct: 152 NFSNDSSKVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKI 211
Query: 78 RDTASFLLEVIEYVQYLQEKVQ 99
A L E+I YVQ LQ +++
Sbjct: 212 TGKAGMLDEIINYVQSLQRQIE 233
>gi|527653|gb|AAA80171.1| myc-like regulatory R gene product, partial [Cenchrus americanus]
Length = 139
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 48 KHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQ 106
KH ++E++RR K+NE F +L+ ++P S K D AS L E I Y+ LQ +VQ+ E S +
Sbjct: 2 KHVMSERKRREKLNEMFLVLKSLVP-SIHKVDKASILAETIAYLNELQRRVQELESSRE 59
>gi|357130181|ref|XP_003566729.1| PREDICTED: uncharacterized protein LOC100831834 [Brachypodium
distachyon]
Length = 298
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 22 KEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTA 81
KEA + + AK G+ R HS+ E+ RR KI+E+ +L+ ++P D+ A
Sbjct: 148 KEAPAGYIHVRAKRGQA-------RDSHSLAERVRREKISEKMLLLQSLVPGCDKVTGKA 200
Query: 82 SFLLEVIEYVQYLQEKVQ 99
L E+I YVQ LQ +V+
Sbjct: 201 MMLDEIISYVQSLQNQVE 218
>gi|388502674|gb|AFK39403.1| unknown [Medicago truncatula]
Length = 175
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 23 EAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTAS 82
EA S +S++ DG S S + SK+ V+E+ RR K+NER LR ++P+ K D AS
Sbjct: 30 EALSAYYDSSSPDGAAS---SGVSSKNIVSERNRRKKLNERLFALRAVVPNI-SKMDKAS 85
Query: 83 FLLEVIEYVQYL--QEKVQKYEV 103
+ + IEY+Q L QEKV + E+
Sbjct: 86 IIKDAIEYIQLLHEQEKVIQAEI 108
>gi|527657|gb|AAA80173.1| myc-like regulatory R gene product, partial [Cenchrus americanus]
Length = 139
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 48 KHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQD 107
KH ++E++RR K+NE F L+ ++P S K D AS L E I Y++ LQ +VQ+ E S +
Sbjct: 2 KHVMSERKRREKLNEMFLALKSLVP-SIHKVDKASILAETIAYLKELQRRVQELESSREP 60
Query: 108 WSAEPT 113
+ P+
Sbjct: 61 MISRPS 66
>gi|242084066|ref|XP_002442458.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
gi|241943151|gb|EES16296.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
Length = 340
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
H++TE+RRR KINER + L++++P K + AS L + I Y++ LQ +VQ V
Sbjct: 169 HNLTEKRRRHKINERLKTLQQLVPGC-SKSNQASTLDQTIHYMKSLQHQVQAMSVG 223
>gi|28375728|dbj|BAC56998.1| F3G1 [Perilla frutescens]
Length = 519
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 44 VIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+I H + E+RRR K+N+RF +LR ++P K D AS L + I+Y++ L++++Q+ E
Sbjct: 359 LINGNHVMAERRRREKLNQRFIVLRSMVPFIT-KMDKASILADTIDYLKQLKKRIQELE 416
>gi|356570570|ref|XP_003553458.1| PREDICTED: transcription factor TT8-like [Glycine max]
Length = 588
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 42 ASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKY 101
AS + H + E+RRR K+NERF ILR ++P + D S L + I Y++ L+EK++
Sbjct: 422 ASSYETNHVMAERRRREKLNERFLILRSMVPFM-MRMDKESILEDTIHYIKQLREKIESL 480
Query: 102 E 102
E
Sbjct: 481 E 481
>gi|356520601|ref|XP_003528950.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 272
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 13/103 (12%)
Query: 19 MSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKR 78
++++E A + + A+ G+ +D HS+ E+ RR KINE+ + L+ I+P +
Sbjct: 143 VTEEEKAKEVVHVRARRGQATDS-------HSLAERVRRGKINEKLRCLQNIVPGCYKTM 195
Query: 79 DTASFLLEVIEYVQYLQEKVQKYEV------SYQDWSAEPTKL 115
A L E+I YVQ LQ +V+ + ++ D+++E L
Sbjct: 196 GMAVMLDEIINYVQSLQHQVEFLSLKLTAASTFYDFNSETDAL 238
>gi|302804013|ref|XP_002983759.1| hypothetical protein SELMODRAFT_118904 [Selaginella
moellendorffii]
gi|300148596|gb|EFJ15255.1| hypothetical protein SELMODRAFT_118904 [Selaginella
moellendorffii]
Length = 89
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRR +INE+ + L+E+IP+S+ K D AS L E IEY++ LQ ++Q
Sbjct: 22 HNLSERRRRDRINEKMRALQELIPNSN-KTDKASMLDEAIEYLKMLQLQLQ 71
>gi|297734539|emb|CBI16590.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+ +E++RR KIN+R + L++++P+S K D AS L EVIEY++ LQ +VQ
Sbjct: 33 HNQSERKRRDKINQRMKTLQKLVPNSS-KTDKASMLDEVIEYLKQLQAQVQ 82
>gi|108707005|gb|ABF94800.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 809
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
Query: 5 KGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASV-IRSK-------HSVTEQRR 56
+G+ E+ M ++E + A D S + V +R+K HS+ E+ R
Sbjct: 587 EGSSSLHSQEETGEMPQRELSMEHAGEKAGDADASREEYVHVRAKRGQATNSHSLAERFR 646
Query: 57 RSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
R KINER ++L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 647 REKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVE 689
>gi|27311243|gb|AAO00689.1| Hypothetical protein [Oryza sativa Japonica Group]
Length = 776
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 8/115 (6%)
Query: 5 KGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASV-IRSK-------HSVTEQRR 56
+G+ E+ M ++E + A D S + V +R+K HS+ E+ R
Sbjct: 587 EGSSSLHSQEETGEMPQRELSMEHAGEKAGDADASREEYVHVRAKRGQATNSHSLAERFR 646
Query: 57 RSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAE 111
R KINER ++L++++P ++ A L E+I YVQ LQ +V+ + S E
Sbjct: 647 REKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSTISPE 701
>gi|297838663|ref|XP_002887213.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333054|gb|EFH63472.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 12/86 (13%)
Query: 26 SNITNSNAKDGKNS-----DKASVIRSK-------HSVTEQRRRSKINERFQILREIIPH 73
N TNS + GK S D +R++ HS+ E+ RR KI+ER + L++++P
Sbjct: 279 GNKTNSGKRQGKQSSDLPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPG 338
Query: 74 SDQKRDTASFLLEVIEYVQYLQEKVQ 99
++ A L E+I YVQ LQ +V+
Sbjct: 339 CNKVTGKAVMLDEIINYVQSLQRQVE 364
>gi|108707003|gb|ABF94798.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 810
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
Query: 5 KGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASV-IRSK-------HSVTEQRR 56
+G+ E+ M ++E + A D S + V +R+K HS+ E+ R
Sbjct: 587 EGSSSLHSQEETGEMPQRELSMEHAGEKAGDADASREEYVHVRAKRGQATNSHSLAERFR 646
Query: 57 RSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
R KINER ++L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 647 REKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVE 689
>gi|242084060|ref|XP_002442455.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
gi|241943148|gb|EES16293.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
Length = 155
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 39/51 (76%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H++TE+RRR KI+++ + LR+++P D K + AS L + I++++ LQ+++Q
Sbjct: 28 HNLTEKRRRRKIDDKLKTLRQLVPGCDDKSNQASILDQTIQHIKSLQQQIQ 78
>gi|158147058|gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147060|gb|ABW22631.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147061|gb|ABW22632.1| bHLH transcription factor Upa20 [Capsicum annuum]
Length = 340
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 14/108 (12%)
Query: 16 DEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSD 75
DE + +EA + + A+ G+ +D HS+ E+ RR KI+ER ++L+ ++P D
Sbjct: 149 DEKKANEEAPTGYIHVRARRGQATDS-------HSLAERVRREKISERMKMLQSLVPGCD 201
Query: 76 QKRDTASFLLEVIEYVQYLQEKVQKYEVS-------YQDWSAEPTKLM 116
+ A L E+I YVQ LQ +V+ + Y D+ + LM
Sbjct: 202 KVTGKALMLDEIINYVQSLQNQVEFLSMKLASLNPMYYDFGMDLDALM 249
>gi|449439645|ref|XP_004137596.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
gi|449487081|ref|XP_004157490.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 458
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV 103
H+ +E+RRR +INE+ + L++++P++ K D AS L EVIEY++ LQ +VQ V
Sbjct: 266 HNQSERRRRDRINEKMKALQKLVPNAS-KTDKASMLDEVIEYLKQLQAQVQFMSV 319
>gi|242084064|ref|XP_002442457.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
gi|241943150|gb|EES16295.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
Length = 353
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
H++TE+RRR KINER + L++++P K + AS L + I Y++ LQ++VQ V
Sbjct: 197 HNLTEKRRRHKINERLKTLQKLVPGC-SKSNQASTLDQTIHYMKSLQQQVQAMSVG 251
>gi|357153670|ref|XP_003576528.1| PREDICTED: uncharacterized protein LOC100826168 [Brachypodium
distachyon]
Length = 458
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQ--KRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR +I ER + L+E++P++++ + D AS L E+I+YV++LQ +V+
Sbjct: 249 HSIAERLRRERIAERMKALQELVPNANKWMQTDKASMLDEIIDYVKFLQLQVK 301
>gi|3096922|emb|CAA18832.1| putative protein [Arabidopsis thaliana]
gi|7270403|emb|CAB80170.1| putative protein [Arabidopsis thaliana]
Length = 324
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 27 NITNSNAKDGKNSDKASVIRSK---------HSVTEQRRRSKINERFQILREIIPHSDQK 77
N +N ++K K +K I + HS+ E+ RR KI+ER + L++++P D+
Sbjct: 152 NFSNDSSKVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKI 211
Query: 78 RDTASFLLEVIEYVQYLQEKVQ 99
A L E+I YVQ LQ +++
Sbjct: 212 TGKAGMLDEIINYVQSLQRQIE 233
>gi|356529573|ref|XP_003533364.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 273
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 13/103 (12%)
Query: 19 MSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKR 78
++++E A + + A+ G+ +D HS+ E+ RR KINE+ + L+ I+P +
Sbjct: 144 VTEEEKAKEVVHVRARRGQATDS-------HSLAERVRRGKINEKLRCLQNIVPGCYKTM 196
Query: 79 DTASFLLEVIEYVQYLQEKVQKYEV------SYQDWSAEPTKL 115
A L E+I YVQ LQ +V+ + ++ D+++E L
Sbjct: 197 GMAVMLDEIINYVQSLQHQVEFLSLKLTAASTFYDFNSETDAL 239
>gi|356506557|ref|XP_003522046.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 397
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 20/115 (17%)
Query: 2 RTTKGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKIN 61
R ++G +EDY+ A+ + S+ + K SV+ H +E+RRR KIN
Sbjct: 206 RISQGEVPDEDYK----------ATKVDRSSGSN-KRIKANSVV---HKQSERRRRDKIN 251
Query: 62 ERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLM 116
+R + L++++P+S K D AS L EVI+Y++ LQ +VQ +W T +M
Sbjct: 252 QRMKELQKLVPNSS-KTDKASMLDEVIQYMKQLQAQVQ-----MMNWMKMYTSMM 300
>gi|356577684|ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 435
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L+E++P ++ A L E+I YVQ LQ++V+
Sbjct: 280 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 330
>gi|413956455|gb|AFW89104.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 239
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 19 MSKKEAASNITNSNAKDGKNSDKASVIRSK-------HSVTEQRRRSKINERFQILREII 71
+ ++E + + NA K D A V R+K HS+ E+ RR KIN R ++L++++
Sbjct: 129 LLQREVSMECADENAAGAKREDYAHV-RAKRGQATNSHSLAERFRREKINVRMKLLQDLV 187
Query: 72 PHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
P ++ A L E+I YVQ LQ +V+
Sbjct: 188 PGCNKITGKAMMLDEIINYVQSLQRQVE 215
>gi|58743491|gb|AAW81732.1| putative bZIPtranscription factor protein [Brassica oleracea]
Length = 263
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 13/90 (14%)
Query: 28 ITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEV 87
+ + A+ G+ +D HS+ E+ RR KINER + L++I+P + A+ L E+
Sbjct: 145 VVHVRARRGQATDS-------HSLAERVRRGKINERLRCLQDIVPGCYKSMGMATMLDEI 197
Query: 88 IEYVQYLQEKVQKYEV------SYQDWSAE 111
I YVQ LQ +V+ + S+ D+++E
Sbjct: 198 INYVQSLQNQVELLSMKLTAASSFYDFNSE 227
>gi|413956454|gb|AFW89103.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 263
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 19 MSKKEAASNITNSNAKDGKNSDKASVIRSK-------HSVTEQRRRSKINERFQILREII 71
+ ++E + + NA K D A V R+K HS+ E+ RR KIN R ++L++++
Sbjct: 129 LLQREVSMECADENAAGAKREDYAHV-RAKRGQATNSHSLAERFRREKINVRMKLLQDLV 187
Query: 72 PHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
P ++ A L E+I YVQ LQ +V+
Sbjct: 188 PGCNKITGKAMMLDEIINYVQSLQRQVE 215
>gi|242076754|ref|XP_002448313.1| hypothetical protein SORBIDRAFT_06g025060 [Sorghum bicolor]
gi|241939496|gb|EES12641.1| hypothetical protein SORBIDRAFT_06g025060 [Sorghum bicolor]
Length = 588
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 14 EDDEFMSKKEAASNI-TNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIP 72
E + + K A S N +D + + S I++ H +++++RR K+NE F IL+ ++P
Sbjct: 364 EPQKLLKKVVAGSGAWANYGGRDTIGTFQQSGIKN-HIMSQRKRREKLNEMFLILKSLVP 422
Query: 73 HSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
S K D AS L E I Y++ LQ ++Q+ E S
Sbjct: 423 -SVHKVDKASILAETIAYLKELQRRIQELESS 453
>gi|324103804|gb|ADY17832.1| bHLH transcription factor [Oryza sativa Indica Group]
Length = 669
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 487 ANHVLKERRRREKPNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 541
>gi|42573702|ref|NP_974947.1| transcription factor bHLH35 [Arabidopsis thaliana]
gi|16604348|gb|AAL24180.1| AT5g57150/MUL3_10 [Arabidopsis thaliana]
gi|332009471|gb|AED96854.1| transcription factor bHLH35 [Arabidopsis thaliana]
Length = 219
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 5/102 (4%)
Query: 11 EDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREI 70
ED+E D +EA S +S++ DG S AS K+ V+E+ RR K+N+R LR +
Sbjct: 22 EDFEYDRSWPLEEAISGSYDSSSPDGAASSPAS----KNIVSERNRRQKLNQRLFALRSV 77
Query: 71 IPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEP 112
+P+ K D AS + + I Y++ LQ + +K E ++ + P
Sbjct: 78 VPNI-TKMDKASIIKDAISYIEGLQYEEKKLEAEIRELESTP 118
>gi|388517319|gb|AFK46721.1| unknown [Medicago truncatula]
Length = 373
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Query: 8 REEEDYEDDEFMSK--KEAASNITNSNAKDGKNSDKASVIRSK-HSVTEQRRRSKINERF 64
+ ED +D ++S +E NI +N K S +K H+++E++RR KINE+
Sbjct: 169 KSHEDTDDSPYLSDNDEETQENIVKEKPVRERNRVKRSYRNAKVHNLSERKRRDKINEKI 228
Query: 65 QILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+ L+E+IP+ + K D AS L + I+Y++ L+ ++Q
Sbjct: 229 RALKELIPNCN-KMDKASMLDDAIDYLKTLKLQLQ 262
>gi|297802514|ref|XP_002869141.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
gi|297314977|gb|EFH45400.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 27 NITNSNAKDGKNSDKASVIRSK---------HSVTEQRRRSKINERFQILREIIPHSDQK 77
N +N ++K K +K I + HS+ E+ RR KI+ER + L++++P D+
Sbjct: 149 NCSNDSSKVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKI 208
Query: 78 RDTASFLLEVIEYVQYLQEKVQ 99
A L E+I YVQ LQ +++
Sbjct: 209 TGKAGMLDEIINYVQSLQRQIE 230
>gi|22479|emb|CAA43115.1| SN [Zea mays]
Length = 616
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 48 KHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
KH ++E++RR K+NE F +L+ ++P S + + AS L E I Y++ LQ +VQ+ E S
Sbjct: 422 KHVMSERKRREKLNEMFLVLKSLLP-SIHRVNKASILAETIAYLKELQRRVQELESS 477
>gi|324103808|gb|ADY17834.1| bHLH transcription factor [Oryza sativa]
Length = 673
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ H + E+RRR K NE+F ILR ++P K D AS L + IEYV+ L+ ++Q+ E
Sbjct: 487 ANHVLKERRRREKPNEKFIILRSLVPFMT-KMDKASILGDTIEYVKQLRNRIQELE 541
>gi|242084068|ref|XP_002442459.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
gi|241943152|gb|EES16297.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
Length = 342
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
H +TE+RRR KINER + L++++P K + AS L + I Y++ LQ++VQ V
Sbjct: 175 HKLTEKRRRHKINERLKTLQQLVPGC-SKSNQASTLDQTIHYMKSLQQQVQAMSVG 229
>gi|224118802|ref|XP_002317910.1| predicted protein [Populus trichocarpa]
gi|222858583|gb|EEE96130.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 13/91 (14%)
Query: 27 NITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLE 86
++ + A+ G+ +D HS+ E+ RR KINER + L++I+P + A L E
Sbjct: 152 DVVHVRARRGQATDS-------HSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDE 204
Query: 87 VIEYVQYLQEKVQKYEV------SYQDWSAE 111
+I YVQ LQ +V+ + ++ D++AE
Sbjct: 205 IINYVQSLQNQVEFLSMKLTAASTFYDFNAE 235
>gi|449439537|ref|XP_004137542.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449532109|ref|XP_004173026.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 265
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 13/90 (14%)
Query: 28 ITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEV 87
+ + A+ G+ +D HS+ E+ RR KINER + L++I+P + A L E+
Sbjct: 145 VVHVRARRGQATDS-------HSLAERVRRGKINERLRCLKDIVPGCYKTMGMAVMLDEI 197
Query: 88 IEYVQYLQEKVQKYEV------SYQDWSAE 111
I YVQ LQ +V+ + S+ D+++E
Sbjct: 198 INYVQSLQNQVEFLSMKLAAASSFYDFNSE 227
>gi|356552284|ref|XP_003544498.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 429
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L+E++P ++ A L E+I YVQ LQ++V+
Sbjct: 274 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 324
>gi|311223162|gb|ADP76654.1| TT8 [Brassica oleracea var. botrytis]
Length = 521
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQD 107
H V E+RRR K+NERF LR ++P K D S L + IEYV +L +++ + E ++ +
Sbjct: 368 HVVAERRRREKLNERFITLRSLVPFVT-KMDKVSILGDTIEYVNHLSKRIHELESTHHE 425
>gi|122232377|sp|Q2HIV9.1|BH035_ARATH RecName: Full=Transcription factor bHLH35; AltName: Full=Basic
helix-loop-helix protein 35; Short=AtbHLH35; Short=bHLH
35; AltName: Full=Transcription factor EN 41; AltName:
Full=bHLH transcription factor bHLH035
gi|87116578|gb|ABD19653.1| At5g57150 [Arabidopsis thaliana]
Length = 248
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 5/102 (4%)
Query: 11 EDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREI 70
ED+E D +EA S +S++ DG S AS K+ V+E+ RR K+N+R LR +
Sbjct: 22 EDFEYDRSWPLEEAISGSYDSSSPDGAASSPAS----KNIVSERNRRQKLNQRLFALRSV 77
Query: 71 IPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEP 112
+P+ K D AS + + I Y++ LQ + +K E ++ + P
Sbjct: 78 VPNI-TKMDKASIIKDAISYIEGLQYEEKKLEAEIRELESTP 118
>gi|414885894|tpg|DAA61908.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 434
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 17/95 (17%)
Query: 5 KGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERF 64
KG RE + + ++++ + TNS HS+ E+ RR KI+ER
Sbjct: 237 KGARETSESQKEDYIHVRARRGQATNS-----------------HSLAERLRREKISERM 279
Query: 65 QILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
++L++++P + A L E+I YVQ LQ +V+
Sbjct: 280 KLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 314
>gi|317141510|gb|ADV03942.1| bHLH DNA binding domain transcription factor BnaC.TT8 [Brassica
napus]
Length = 521
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQD 107
H V E+RRR K+NERF LR ++P K D S L + IEYV +L +++ + E ++ +
Sbjct: 368 HVVAERRRREKLNERFITLRSLVPFVT-KMDKVSILGDTIEYVNHLSKRIHELESTHHE 425
>gi|356556246|ref|XP_003546437.1| PREDICTED: transcription factor bHLH35-like [Glycine max]
Length = 243
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 7/83 (8%)
Query: 23 EAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTAS 82
EA S +S++ DG S AS K+ V+E+ RR K+NER LR ++P+ K D AS
Sbjct: 30 EALSGYYDSSSPDGAASSAAS----KNIVSERNRRKKLNERLFALRSVVPNIS-KMDKAS 84
Query: 83 FLLEVIEYVQYL--QEKVQKYEV 103
+ + I+Y+Q+L QEK+ + E+
Sbjct: 85 IIKDAIDYIQHLHEQEKIIQAEI 107
>gi|91981271|gb|ABE67978.1| myc-like anthocyanin regulatory protein [Caragana jubata]
Length = 633
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 51 VTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSA 110
V +RRR+K+NERF LR ++P S+ K D S L + I+Y++ L+E++++ EV +
Sbjct: 438 VLSERRRAKLNERFLTLRSMVP-SNSKDDKVSILDDAIDYLRKLKERIRELEVHKEQTDI 496
Query: 111 EP 112
EP
Sbjct: 497 EP 498
>gi|168039475|ref|XP_001772223.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676554|gb|EDQ63036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 78
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+ +E+RRR +INE+ + L+E+IP+S+ K D AS L E IEY++ LQ ++Q
Sbjct: 28 HNQSERRRRDRINEKMRALQELIPNSN-KTDKASMLEEAIEYLKMLQLQLQ 77
>gi|449304939|gb|EMD00946.1| hypothetical protein BAUCODRAFT_190174 [Baudoinia compniacensis
UAMH 10762]
Length = 423
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHS-DQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
++ HS+ E+RRRSK+NE F +L+++IP Q+ + L IEY++YL++ V +
Sbjct: 155 KTAHSLIERRRRSKMNEEFGVLKDMIPACKGQEMHKLAILQASIEYLRYLEQCVADLQAQ 214
Query: 105 YQDWSAEPTKLMPWRNSH 122
+P + + +H
Sbjct: 215 NNSPRPQPPPTLAAQGAH 232
>gi|168027605|ref|XP_001766320.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682534|gb|EDQ68952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 120
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 38/50 (76%)
Query: 50 SVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
S+ E+ RR+KI+ER + L++++P+ D++ +T+ L E +EYV+ LQ KVQ
Sbjct: 44 SIAERVRRTKISERMKRLQDLVPNMDKQTNTSDMLDETVEYVKSLQRKVQ 93
>gi|164507097|gb|ABY59772.1| bHLH DNA-binding domain transcription factor [Brassica napus]
gi|317141496|gb|ADV03941.1| bHLH DNA binding domain transcription factor BnaA.TT8 [Brassica
napus]
gi|326681537|gb|AEA03281.1| transparent testa 8 [Brassica rapa subsp. rapa]
Length = 521
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQD 107
H V E+RRR K+NERF LR ++P K D S L + IEYV +L +++ + E ++ +
Sbjct: 368 HVVAERRRREKLNERFITLRSLVPFVT-KMDKVSILGDTIEYVNHLSKRIHELESTHHE 425
>gi|356501827|ref|XP_003519725.1| PREDICTED: uncharacterized protein LOC100783804 [Glycine max]
Length = 852
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 46/62 (74%), Gaps = 4/62 (6%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
H++ E++RR KIN+R +IL+E+IP+ + K D AS L + IEY++ L+ ++Q V+++ +
Sbjct: 756 HNLCERKRRDKINKRMRILKELIPNCN-KTDKASMLDDAIEYLKTLKLQIQ---VNFKSF 811
Query: 109 SA 110
S+
Sbjct: 812 SS 813
>gi|297809111|ref|XP_002872439.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318276|gb|EFH48698.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
Query: 24 AASNITNSNAKDGKNSDKASVIRSKH-------SVTEQRRRSKINERFQILREIIPHSDQ 76
S +T+ N ++ A +R+K S+ E+ RR++I++R + L+E++P+ D+
Sbjct: 165 GVSGMTDMNMENLMEDSVAFRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDK 224
Query: 77 KRDTASFLLEVIEYVQYLQEKVQK 100
+ +TA L E +EYV+ LQ ++Q+
Sbjct: 225 QTNTADMLEEAVEYVKVLQRQIQE 248
>gi|218192387|gb|EEC74814.1| hypothetical protein OsI_10634 [Oryza sativa Indica Group]
gi|222624516|gb|EEE58648.1| hypothetical protein OsJ_10029 [Oryza sativa Japonica Group]
Length = 307
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KINER ++L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 136 HSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVE 186
>gi|384248401|gb|EIE21885.1| hypothetical protein COCSUDRAFT_56332 [Coccomyxa subellipsoidea
C-169]
Length = 1579
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 48 KHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQK 100
+H TEQRRR +INE F L+ ++P +K D A+FL +EY++ LQ +Q+
Sbjct: 57 RHVQTEQRRRDRINEGFAALKALMP-GQEKMDKATFLNSTVEYIKQLQGVMQQ 108
>gi|326523695|dbj|BAJ93018.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 417
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 6 GNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQ 65
GN E ++E K E + + A+ G+ +D HS+ E+ RR KI ER +
Sbjct: 236 GNDENAGAVEEE---KSEPVKDYIHVRARRGQATDS-------HSLAERVRREKIGERMK 285
Query: 66 ILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+L+ ++P ++ A L E+I YVQ LQ +V+
Sbjct: 286 LLQSLVPSCNKITGKALMLDEIINYVQSLQRQVE 319
>gi|351724377|ref|NP_001238591.1| inducer of CBF expression 3 [Glycine max]
gi|213053816|gb|ACJ39213.1| inducer of CBF expression 3 [Glycine max]
Length = 336
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 12 DYEDDEFMSKKEAASNITNSNAKDGKNSDKA-----SVIRSKHSVTEQRRRSKINERFQI 66
+Y+ DE I+ A++G NS KA + I +K+ + E+RRR K+N+R +
Sbjct: 112 NYDSDEISDDNNKMEEIS---ARNGGNSSKANSTKKTGIPAKNLMAERRRRKKLNDRLYM 168
Query: 67 LREIIPHSDQKRDTASFLLEVIEYVQYLQEKV 98
LR ++P+ K D AS L + IEY++ L +++
Sbjct: 169 LRSVVPNI-SKMDRASILGDAIEYLKELLQRI 199
>gi|168042679|ref|XP_001773815.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674930|gb|EDQ61432.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 418
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 22 KEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTA 81
KEA +T DG + + ++ H + E+RRR K+N+RF LRE+IP+ K D A
Sbjct: 192 KEALFRVTR--LYDGASEETSA----SHVLAERRRREKLNDRFVALRELIPNVS-KMDKA 244
Query: 82 SFLLEVIEYVQYLQEKVQKYE 102
S L IEYV+ LQ +++ E
Sbjct: 245 SILGVAIEYVKELQSQLRALE 265
>gi|413954820|gb|AFW87469.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 359
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KIN R ++L+E++P + TA L E+I +VQ LQ +V+
Sbjct: 191 HSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVE 241
>gi|159131301|gb|EDP56414.1| HLH transcription factor, putative [Aspergillus fumigatus A1163]
Length = 399
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHS-DQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
++ HS+ E+RRRSK+NE F L+++IP Q S L IEYV YL++ +Q + +
Sbjct: 161 KTAHSLIERRRRSKMNEEFATLKDMIPACRGQDMHKLSILQASIEYVNYLEKCIQDLKTA 220
>gi|42573704|ref|NP_974948.1| transcription factor bHLH35 [Arabidopsis thaliana]
gi|8843817|dbj|BAA97365.1| unnamed protein product [Arabidopsis thaliana]
gi|332009472|gb|AED96855.1| transcription factor bHLH35 [Arabidopsis thaliana]
Length = 226
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 5/102 (4%)
Query: 11 EDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREI 70
ED+E D +EA S +S++ DG S AS K+ V+E+ RR K+N+R LR +
Sbjct: 22 EDFEYDRSWPLEEAISGSYDSSSPDGAASSPAS----KNIVSERNRRQKLNQRLFALRSV 77
Query: 71 IPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEP 112
+P+ K D AS + + I Y++ LQ + +K E ++ + P
Sbjct: 78 VPNI-TKMDKASIIKDAISYIEGLQYEEKKLEAEIRELESTP 118
>gi|317141522|gb|ADV03943.1| bHLH DNA binding domain transcription factor BraA.TT8 [Brassica
rapa]
Length = 521
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQD 107
H V E+RRR K+NERF LR ++P K D S L + IEYV +L +++ + E ++ +
Sbjct: 368 HVVAERRRREKLNERFITLRSLVPFVT-KMDKVSILGDTIEYVNHLSKRIHELESTHHE 425
>gi|295913657|gb|ADG58071.1| transcription factor [Lycoris longituba]
Length = 258
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER IL++++P ++ AS L E+I Y+Q LQ +V+
Sbjct: 142 HSLAERARREKISERMNILQDLVPGCNKVIGKASVLDEIINYIQALQRQVE 192
>gi|224136007|ref|XP_002327358.1| predicted protein [Populus trichocarpa]
gi|222835728|gb|EEE74163.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 40/52 (76%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQK 100
S+ E+ RR++I++R + L+E++P+ D++ +TA L E ++YV++LQ ++Q+
Sbjct: 199 RSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVDYVKFLQRQIQE 250
>gi|168027682|ref|XP_001766358.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682267|gb|EDQ68686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+ +E+RRR +INE+ + L+E+IP+S+ K D AS L E IEY++ LQ ++Q
Sbjct: 28 HNQSERRRRDRINEKMRALQELIPNSN-KTDKASMLDEAIEYLKMLQLQLQ 77
>gi|70995582|ref|XP_752546.1| HLH transcription factor [Aspergillus fumigatus Af293]
gi|41581255|emb|CAE47904.1| possible bhlh transcription factor [Aspergillus fumigatus]
gi|66850181|gb|EAL90508.1| HLH transcription factor, putative [Aspergillus fumigatus Af293]
Length = 399
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHS-DQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
++ HS+ E+RRRSK+NE F L+++IP Q S L IEYV YL++ +Q + +
Sbjct: 161 KTAHSLIERRRRSKMNEEFATLKDMIPACRGQDMHKLSILQASIEYVNYLEKCIQDLKTA 220
>gi|356553623|ref|XP_003545154.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 562
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+ +E+RRR +INE+ + L+++IP+S+ K D AS L E IEY++ LQ ++Q
Sbjct: 365 HNQSERRRRDRINEKMRTLQQLIPNSN-KTDKASMLEEAIEYLKSLQFQLQ 414
>gi|218188514|gb|EEC70941.1| hypothetical protein OsI_02533 [Oryza sativa Indica Group]
Length = 448
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H ++E+RRR K+NE F L+ ++P D K D AS L E I Y++ L+ +VQ+ E
Sbjct: 289 HVMSERRRREKLNEMFLTLKSLVPSID-KVDKASILAETIAYLKELERRVQELE 341
>gi|449456931|ref|XP_004146202.1| PREDICTED: transcription factor MYC4-like [Cucumis sativus]
Length = 443
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 14/92 (15%)
Query: 18 FMSKKEAASNITNSNA--KDGKNSDK-----ASVIRSKHSVTEQRRRSKINERFQILREI 70
FMS K NSN K GK S K S + H E++RR K+N+RF LR +
Sbjct: 244 FMSTK------INSNVGKKRGKRSAKNIKTELSSLPVNHVEAERQRRQKLNQRFYALRSV 297
Query: 71 IPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+P+ K D AS L + EY++ L+ KVQK E
Sbjct: 298 VPNVS-KMDKASLLADAAEYIKELKSKVQKLE 328
>gi|449495155|ref|XP_004159750.1| PREDICTED: transcription factor MYC4-like [Cucumis sativus]
Length = 443
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 14/92 (15%)
Query: 18 FMSKKEAASNITNSNA--KDGKNSDK-----ASVIRSKHSVTEQRRRSKINERFQILREI 70
FMS K NSN K GK S K S + H E++RR K+N+RF LR +
Sbjct: 244 FMSTK------INSNVGKKRGKRSAKNNKTELSSLPVNHVEAERQRRQKLNQRFYALRSV 297
Query: 71 IPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+P+ K D AS L + EY++ L+ KVQK E
Sbjct: 298 VPNVS-KMDKASLLADAAEYIKELKSKVQKLE 328
>gi|396462450|ref|XP_003835836.1| hypothetical protein LEMA_P051770.1 [Leptosphaeria maculans JN3]
gi|312212388|emb|CBX92471.1| hypothetical protein LEMA_P051770.1 [Leptosphaeria maculans JN3]
Length = 592
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 22 KEAASNITNSNAKDGKNSDKAS---VIRSKHSVTEQRRRSKINERFQILREIIPHS-DQK 77
K + S K G NS A ++ HS+ E+RRRSK+NE F +L+++IP Q+
Sbjct: 301 KSTTGSTNASKKKQGGNSTAAGRKIARKTAHSLIERRRRSKMNEEFGVLKDMIPACRGQE 360
Query: 78 RDTASFLLEVIEYVQYLQEKVQKYEVSY 105
+ L IEY++YL++ + + ++
Sbjct: 361 MHKLAILQASIEYMRYLEKCLSDLKTAH 388
>gi|302764076|ref|XP_002965459.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
gi|302825088|ref|XP_002994179.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300137980|gb|EFJ04769.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300166273|gb|EFJ32879.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
Length = 143
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L++++P+++ K D AS L E+++YV++LQ +V+ +S
Sbjct: 15 HSIAERLRRERIAERMKALQDLVPNAN-KTDKASMLDEIVDYVKFLQLQVKVLSMS 69
>gi|77557141|gb|ABA99937.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 338
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H + E+RRR KIN+RF L +IP +K D A+ L + ++YV+ LQEKV+ E
Sbjct: 168 HIIAERRRREKINQRFIELSTVIP-GLKKMDKATILGDAVKYVKELQEKVKTLE 220
>gi|125580175|gb|EAZ21321.1| hypothetical protein OsJ_36975 [Oryza sativa Japonica Group]
Length = 338
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H + E+RRR KIN+RF L +IP +K D A+ L + ++YV+ LQEKV+ E
Sbjct: 168 HIIAERRRREKINQRFIELSTVIP-GLKKMDKATILGDAVKYVKELQEKVKTLE 220
>gi|125537518|gb|EAY84006.1| hypothetical protein OsI_39237 [Oryza sativa Indica Group]
Length = 309
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H + E+RRR KIN+RF L +IP +K D A+ L + ++YV+ LQEKV+ E
Sbjct: 165 HIIAERRRREKINQRFIELSTVIP-GLKKMDKATILGDAVKYVKELQEKVKTLE 217
>gi|357117653|ref|XP_003560578.1| PREDICTED: transcription factor bHLH48-like [Brachypodium
distachyon]
Length = 259
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 51/87 (58%), Gaps = 8/87 (9%)
Query: 21 KKEAASNITNSNAKDGKNSDKASV-IRSK-------HSVTEQRRRSKINERFQILREIIP 72
K + A++ + +A G++ A V +R++ HS+ E+ RR KIN R ++L+E++P
Sbjct: 55 KADHAADRASKDAGGGEDEKPAYVHVRARRGQATDSHSLAERARREKINARMELLKELVP 114
Query: 73 HSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+ TA L E+I +VQ LQ +V+
Sbjct: 115 GCSKVSGTALVLDEIINHVQSLQRQVE 141
>gi|346320879|gb|EGX90479.1| HLH transcription factor, putative [Cordyceps militaris CM01]
Length = 436
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
++ HS+ E+RRRSK+NE F +L+ +IP + L IEY++YL++ V + + +
Sbjct: 199 KTAHSLIERRRRSKMNEEFAVLKNMIPACTGDMHKLAILQASIEYIRYLEDCVSQLKAQH 258
>gi|255537964|ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
gi|223550748|gb|EEF52234.1| DNA binding protein, putative [Ricinus communis]
Length = 408
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L+E++P ++ A L E+I YVQ LQ++V+
Sbjct: 253 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 303
>gi|30685840|ref|NP_173276.2| transcription factor BEE 1 [Arabidopsis thaliana]
gi|75299631|sp|Q8GZ13.1|BEE1_ARATH RecName: Full=Transcription factor BEE 1; AltName: Full=Basic
helix-loop-helix protein 44; Short=AtbHLH44; Short=bHLH
44; AltName: Full=Protein Brassinosteroid enhanced
expression 1; AltName: Full=Transcription factor EN 77;
AltName: Full=bHLH transcription factor bHLH044
gi|26449635|dbj|BAC41942.1| putative bHLH transcription factor bHLH044 [Arabidopsis thaliana]
gi|28950817|gb|AAO63332.1| At1g18400 [Arabidopsis thaliana]
gi|34391437|gb|AAN18283.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332191590|gb|AEE29711.1| transcription factor BEE 1 [Arabidopsis thaliana]
Length = 260
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV----- 103
HS+ E+ RR KINER + L++++P + A+ L E+I YVQ LQ +V+ +
Sbjct: 156 HSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVEFLSMKLTAA 215
Query: 104 -SYQDWSAE 111
S+ D+++E
Sbjct: 216 SSFYDFNSE 224
>gi|317141530|gb|ADV03944.1| bHLH DNA binding domain transcription factor BolC.TT8 [Brassica
oleracea]
Length = 521
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQD 107
H V E+RRR K+NERF LR ++P K D S L + IEYV +L +++ + E ++ +
Sbjct: 368 HVVAERRRREKLNERFITLRSLVPFVT-KMDKISILGDTIEYVNHLSKRIHELESTHHE 425
>gi|308080388|ref|NP_001183599.1| uncharacterized protein LOC100502193 [Zea mays]
gi|238013326|gb|ACR37698.1| unknown [Zea mays]
gi|413951548|gb|AFW84197.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 480
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 13/101 (12%)
Query: 23 EAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTAS 82
EA + + A+ G+ +D HS+ E+ RR KI++R ++L++++P ++ A
Sbjct: 272 EAPKDYIHVRARRGEATDS-------HSLAERVRREKISQRMKLLQDLVPGCNKVVGKAV 324
Query: 83 FLLEVIEYVQYLQEKVQKYEVSYQ------DWSAEPTKLMP 117
L E+I YVQ LQ +V+ + D+++ P L+P
Sbjct: 325 MLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNSLPNLLLP 365
>gi|357147364|ref|XP_003574318.1| PREDICTED: transcription factor UNE10-like isoform 2 [Brachypodium
distachyon]
Length = 453
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 39 SDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKV 98
S K S + H+ +E++RR +IN++ Q L++++P+S K D AS L EVIE+++ LQ +V
Sbjct: 255 STKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSS-KTDKASMLDEVIEHLKQLQAQV 313
Query: 99 Q 99
Q
Sbjct: 314 Q 314
>gi|242076748|ref|XP_002448310.1| hypothetical protein SORBIDRAFT_06g025020 [Sorghum bicolor]
gi|48374958|gb|AAT42156.1| b1-2 [Sorghum bicolor]
gi|241939493|gb|EES12638.1| hypothetical protein SORBIDRAFT_06g025020 [Sorghum bicolor]
Length = 585
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 49 HSVTEQRRRSKINERFQILREIIP--HSDQK--RDTASFLLEVIEYVQYLQEKVQKYEVS 104
H ++E++RR KINE F IL+ ++P H K D AS L E I Y++ LQ +VQ+ E S
Sbjct: 386 HVMSERKRREKINEMFLILKSLVPSIHKAMKIHVDKASILTETIAYLKELQRRVQELESS 445
>gi|357147361|ref|XP_003574317.1| PREDICTED: transcription factor UNE10-like isoform 1 [Brachypodium
distachyon]
Length = 460
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 39 SDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKV 98
S K S + H+ +E++RR +IN++ Q L++++P+S K D AS L EVIE+++ LQ +V
Sbjct: 255 STKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSS-KTDKASMLDEVIEHLKQLQAQV 313
Query: 99 Q 99
Q
Sbjct: 314 Q 314
>gi|297726953|ref|NP_001175840.1| Os09g0417400 [Oryza sativa Japonica Group]
gi|50253024|dbj|BAD29274.1| bHLH transcription factor PTF1-like protein [Oryza sativa Japonica
Group]
gi|255678901|dbj|BAH94568.1| Os09g0417400 [Oryza sativa Japonica Group]
Length = 499
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQ--KRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR +I ER + L+E++P++++ + D AS L E+I+YV++LQ +V+
Sbjct: 261 HSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQLQVK 313
>gi|356501423|ref|XP_003519524.1| PREDICTED: transcription factor PIF4-like [Glycine max]
Length = 562
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+ +E+RRR +INE+ + L+++IP+S+ K D AS L E IEY++ LQ ++Q
Sbjct: 365 HNQSERRRRDRINEKMRTLQQLIPNSN-KTDKASMLEEAIEYLKSLQFQLQ 414
>gi|300117045|dbj|BAJ10680.1| bHLH transcription factor [Lotus japonicus]
Length = 623
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H ++E+RRR+K+NERF LR ++P S+ K D S L + IEY + L++++++ E
Sbjct: 430 HVLSERRRRAKLNERFLTLRSMVP-SNIKDDKVSILDDAIEYFRSLEKRIRELE 482
>gi|79340401|ref|NP_172483.4| transcription factor bHLH74 [Arabidopsis thaliana]
gi|75291341|sp|Q6NKN9.1|BH074_ARATH RecName: Full=Transcription factor bHLH74; AltName: Full=Basic
helix-loop-helix protein 74; Short=AtbHLH74; Short=bHLH
74; AltName: Full=Transcription factor EN 90; AltName:
Full=bHLH transcription factor bHLH074
gi|46931340|gb|AAT06474.1| At1g10120 [Arabidopsis thaliana]
gi|62320956|dbj|BAD93978.1| bHLH transcription factor like protein [Arabidopsis thaliana]
gi|332190423|gb|AEE28544.1| transcription factor bHLH74 [Arabidopsis thaliana]
Length = 366
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L+E++P ++ A L E+I YVQ LQ++V+
Sbjct: 217 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 267
>gi|224081861|ref|XP_002306505.1| predicted protein [Populus trichocarpa]
gi|222855954|gb|EEE93501.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L+E++P ++ A L E+I YVQ LQ++V+
Sbjct: 251 HSLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 301
>gi|334188452|ref|NP_001190556.1| transcription factor bHLH35 [Arabidopsis thaliana]
gi|332009473|gb|AED96856.1| transcription factor bHLH35 [Arabidopsis thaliana]
Length = 264
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 5/102 (4%)
Query: 11 EDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREI 70
ED+E D +EA S +S++ DG S AS K+ V+E+ RR K+N+R LR +
Sbjct: 22 EDFEYDRSWPLEEAISGSYDSSSPDGAASSPAS----KNIVSERNRRQKLNQRLFALRSV 77
Query: 71 IPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEP 112
+P+ K D AS + + I Y++ LQ + +K E ++ + P
Sbjct: 78 VPNI-TKMDKASIIKDAISYIEGLQYEEKKLEAEIRELESTP 118
>gi|297849334|ref|XP_002892548.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
gi|297338390|gb|EFH68807.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L+E++P ++ A L E+I YVQ LQ++V+
Sbjct: 215 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 265
>gi|121701659|ref|XP_001269094.1| HLH transcription factor, putative [Aspergillus clavatus NRRL 1]
gi|119397237|gb|EAW07668.1| HLH transcription factor, putative [Aspergillus clavatus NRRL 1]
Length = 394
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Query: 19 MSKKEAASNI-TNSNAKDGKNSDKASVIR-----SKHSVTEQRRRSKINERFQILREIIP 72
+S KE ++N T +N+K + S ++ R + HS+ E+RRRSK+NE F L+++IP
Sbjct: 121 LSTKEKSNNAATPANSKKKQPSATSAAGRKIARKTAHSLIERRRRSKMNEEFATLKDMIP 180
Query: 73 HS-DQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
Q + L IEYV YL+ +Q + +
Sbjct: 181 ACQGQDMHKLAILQASIEYVNYLERCIQDLKTA 213
>gi|51969310|dbj|BAD43347.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|51970180|dbj|BAD43782.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
Length = 327
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KIN R ++L+E++P D+ + T L E+I +VQ LQ +V+
Sbjct: 196 HSLAERARREKINARMKLLQELVPGCDKIQGTGLVLDEIINHVQTLQRQVE 246
>gi|242047764|ref|XP_002461628.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
gi|241925005|gb|EER98149.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
Length = 178
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L++I+P ++ AS L E+I Y+Q LQ +V+
Sbjct: 61 HSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQVE 111
>gi|224135389|ref|XP_002322061.1| predicted protein [Populus trichocarpa]
gi|222869057|gb|EEF06188.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 13/90 (14%)
Query: 28 ITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEV 87
+ + A+ G+ +D HS+ E+ RR KINER + L++I+P + A L E+
Sbjct: 154 VVHVRARRGQATDS-------HSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEI 206
Query: 88 IEYVQYLQEKVQKYEV------SYQDWSAE 111
I YVQ LQ +V+ + ++ D++AE
Sbjct: 207 INYVQSLQNQVEFLSMKLTAASTFYDFNAE 236
>gi|449447083|ref|XP_004141299.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 249
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L+E++P ++ A L E+I YVQ LQ++V+
Sbjct: 90 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 140
>gi|242087185|ref|XP_002439425.1| hypothetical protein SORBIDRAFT_09g006220 [Sorghum bicolor]
gi|241944710|gb|EES17855.1| hypothetical protein SORBIDRAFT_09g006220 [Sorghum bicolor]
Length = 308
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 19 MSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKR 78
+S+++ S+ T A +SD+++ I+ +H ++E++RR KIN+ F LR +P S KR
Sbjct: 196 LSQRQRQSSRTEMAAPAVPSSDESNNIQLQHLLSERKRREKINDSFDALRNALPPSS-KR 254
Query: 79 DTASFLLEVIEYVQYLQEKVQKYE 102
D S L+ +Y+ LQ +V + E
Sbjct: 255 DKTSILMRARDYINSLQSRVSELE 278
>gi|388503848|gb|AFK39990.1| unknown [Lotus japonicus]
Length = 248
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER +IL++++P ++ A L E+I Y+Q LQ +V+
Sbjct: 130 HSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVE 180
>gi|168064096|ref|XP_001784001.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664450|gb|EDQ51169.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 966
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 14 EDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPH 73
++ E +S K AS S G S K H TE++RR +NE++Q LR ++P+
Sbjct: 718 QEREDLSGKNVASAY-GSKRDHGAASGKGEPRGVNHFATERQRREYLNEKYQTLRSLVPN 776
Query: 74 SDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQD 107
K D AS + + IEYV+ L+ VQ+ ++ Q+
Sbjct: 777 P-TKADRASIVADAIEYVKELKRTVQELQLLVQE 809
>gi|356548804|ref|XP_003542789.1| PREDICTED: transcription factor bHLH35-like [Glycine max]
Length = 233
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Query: 23 EAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTAS 82
EA S +S++ DG + +S + SK+ V+E+ RR K+N+R LR ++P+ K D AS
Sbjct: 33 EAVSWYYDSSSPDGTGA--SSSVASKNIVSERNRRKKLNDRLLALRAVVPNI-TKMDKAS 89
Query: 83 FLLEVIEYVQYLQEKVQKYEVSYQD 107
+ + IEY+Q+L E+ ++ + D
Sbjct: 90 IIKDAIEYIQHLHEQEKRIQAEILD 114
>gi|343795733|gb|AEM63394.1| delila2 [Antirrhinum majus]
Length = 644
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 42 ASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKY 101
A I H ++E++RR KINERF IL ++P S K D S L I+Y++ L+ KV++
Sbjct: 437 ADEIDRNHVLSERKRREKINERFMILASLVP-SGGKVDKVSILDHTIDYLRGLERKVEEL 495
Query: 102 E 102
E
Sbjct: 496 E 496
>gi|365987634|ref|XP_003670648.1| hypothetical protein NDAI_0F00860 [Naumovozyma dairenensis CBS 421]
gi|343769419|emb|CCD25405.1| hypothetical protein NDAI_0F00860 [Naumovozyma dairenensis CBS 421]
Length = 429
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 42/154 (27%)
Query: 49 HSVTEQRRRSKINERFQILREIIP-------------------------HSDQKRDTASF 83
H++ E++ R +N++ LR+I+P + +K + S
Sbjct: 261 HNIIEKKYRKNLNDKILQLRDIVPTLRVTHKKNSKIPLDDKDFYDLAHLNPTRKLNKGSI 320
Query: 84 LLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNS----------------HWRVQN 127
L + IEY+QYL+EK KYE + + +L P +S + +
Sbjct: 321 LTKAIEYIQYLEEKCSKYEAEGKVGKVKLKRLEPSLSSTTYNSQTISPDSPNSGNINDKT 380
Query: 128 FATQPHAIKNGSGPGSMFPGK-FDDNSISMSPTM 160
F+T+ H + + S SMFP K F N+ SP +
Sbjct: 381 FSTESHLLTSRSSSVSMFPEKTFQSNNHHFSPIL 414
>gi|449434704|ref|XP_004135136.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 561
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER + L+E++P + A L E+I YVQ LQ +V+
Sbjct: 380 HSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVE 430
>gi|224029073|gb|ACN33612.1| unknown [Zea mays]
gi|413938471|gb|AFW73022.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR +I+ER + L+E++P + A L E+I YVQ LQ++V+
Sbjct: 157 HSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVE 207
>gi|119495602|ref|XP_001264582.1| HLH transcription factor, putative [Neosartorya fischeri NRRL 181]
gi|119412744|gb|EAW22685.1| HLH transcription factor, putative [Neosartorya fischeri NRRL 181]
Length = 399
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHS-DQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
++ HS+ E+RRRSK+NE F L+++IP Q + L IEYV YL++ VQ + +
Sbjct: 161 KTAHSLIERRRRSKMNEEFATLKDMIPACRGQDMHKLAILQASIEYVNYLEKCVQDLKTA 220
>gi|323388909|gb|ADX60259.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 265
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER +IL++++P ++ AS L E+I Y+Q LQ +V+
Sbjct: 147 HSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVE 197
>gi|125557558|gb|EAZ03094.1| hypothetical protein OsI_25238 [Oryza sativa Indica Group]
gi|125599428|gb|EAZ39004.1| hypothetical protein OsJ_23423 [Oryza sativa Japonica Group]
Length = 256
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER +IL++++P ++ AS L E+I Y+Q LQ +V+
Sbjct: 139 HSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVE 189
>gi|295913405|gb|ADG57955.1| transcription factor [Lycoris longituba]
Length = 186
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER +IL++++P ++ AS L E+I Y+Q LQ +V+
Sbjct: 70 HSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVE 120
>gi|255548227|ref|XP_002515170.1| hypothetical protein RCOM_1343120 [Ricinus communis]
gi|223545650|gb|EEF47154.1| hypothetical protein RCOM_1343120 [Ricinus communis]
Length = 584
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 39 SDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKV 98
S K I HS++E++RR KIN++ + L+ +IP+SD K D AS L + IEY++ LQ ++
Sbjct: 375 STKKKRIPQVHSLSERKRRDKINKKMRALQALIPNSD-KVDKASMLDKAIEYLKTLQLQL 433
Query: 99 Q 99
Q
Sbjct: 434 Q 434
>gi|242041659|ref|XP_002468224.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
gi|241922078|gb|EER95222.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
Length = 291
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KINER ++L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 134 HSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVE 184
>gi|6714300|gb|AAF25996.1|AC013354_15 F15H18.11 [Arabidopsis thaliana]
Length = 1154
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV----- 103
HS+ E+ RR KINER + L++++P + A+ L E+I YVQ LQ +V+ +
Sbjct: 1050 HSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVEFLSMKLTAA 1109
Query: 104 -SYQDWSAE 111
S+ D+++E
Sbjct: 1110 SSFYDFNSE 1118
>gi|115456009|ref|NP_001051605.1| Os03g0802900 [Oryza sativa Japonica Group]
gi|29150361|gb|AAO72370.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711612|gb|ABF99407.1| bHLH transcription factor, putative, expressed [Oryza sativa
Japonica Group]
gi|113550076|dbj|BAF13519.1| Os03g0802900 [Oryza sativa Japonica Group]
Length = 265
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER +IL++++P ++ AS L E+I Y+Q LQ +V+
Sbjct: 147 HSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVE 197
>gi|357516845|ref|XP_003628711.1| BHLH transcription factor [Medicago truncatula]
gi|355522733|gb|AET03187.1| BHLH transcription factor [Medicago truncatula]
Length = 467
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER + L++++P ++ A L E+I YVQ LQ++V+
Sbjct: 316 HSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQQQVE 366
>gi|18423212|ref|NP_568745.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|30695963|ref|NP_851163.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|75305763|sp|Q93W88.1|BH137_ARATH RecName: Full=Transcription factor bHLH137; AltName: Full=Basic
helix-loop-helix protein 137; Short=AtbHLH137;
Short=bHLH 137; AltName: Full=Transcription factor EN
89; AltName: Full=bHLH transcription factor bHLH137
gi|16226850|gb|AAL16280.1|AF428350_1 unknown protein [Arabidopsis thaliana]
gi|15982883|gb|AAL09788.1| probable DNA-binding protein [Arabidopsis thaliana]
gi|21360503|gb|AAM47367.1| At5g50917/At5g50917 [Arabidopsis thaliana]
gi|21593195|gb|AAM65144.1| unknown [Arabidopsis thaliana]
gi|332008626|gb|AED96009.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|332008627|gb|AED96010.1| transcription factor bHLH137 [Arabidopsis thaliana]
Length = 286
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Query: 20 SKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRD 79
SK+E ++ + A+ G+ +D HS+ E+ RR KI+ER + L+ ++P D+
Sbjct: 125 SKEEPPTDYIHVRARRGQATDS-------HSLAERVRREKISERMRTLQNLVPGCDKVTG 177
Query: 80 TASFLLEVIEYVQYLQEKVQ 99
A L E+I YVQ LQ +V+
Sbjct: 178 KALMLDEIINYVQTLQTQVE 197
>gi|413938470|gb|AFW73021.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 340
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR +I+ER + L+E++P + A L E+I YVQ LQ++V+
Sbjct: 157 HSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVE 207
>gi|380006415|gb|AFD29598.1| DEL65 [Gossypium arboreum]
Length = 620
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 33 AKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQ 92
+D +A I H ++E++RR KINER IL+ ++P ++ K D S L IEY+Q
Sbjct: 421 VRDAAWRPEADEICGNHVLSERKRREKINERLMILKSLVP-ANNKADKVSILDVTIEYLQ 479
Query: 93 YLQEKVQKYE 102
L+ +V + E
Sbjct: 480 ALERRVAELE 489
>gi|237687961|gb|ACR14981.1| FIT1 [Arabidopsis halleri subsp. gemmifera]
Length = 318
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 24/127 (18%)
Query: 6 GNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQ 65
G EEEDY D + ++++ TN++ S K RS+ ++E+RRR ++ ++
Sbjct: 99 GEEEEEDYNDGD-----DSSATTTNNDG-----SRKTKTDRSRTLISERRRRGRMKDKLY 148
Query: 66 ILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV-------------SYQDWSAEP 112
LR ++P+ K D AS + + + YVQ LQ + +K + YQ+ +++
Sbjct: 149 ALRSLVPNI-TKMDKASIVGDAVSYVQELQSQAKKLKSDIAGLEASLNSTGGYQEPASDA 207
Query: 113 TKLMPWR 119
K P+R
Sbjct: 208 QKTQPFR 214
>gi|242079823|ref|XP_002444680.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
gi|241941030|gb|EES14175.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
Length = 293
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 8/98 (8%)
Query: 2 RTTKGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKIN 61
++ +G R ++ E+ ++ EA + A+ G+ +D HS+ E+ RR +I+
Sbjct: 94 KSKRGKRPNKETEEKS-TTEDEATKGYIHVRARRGQATDS-------HSLAERVRRERIS 145
Query: 62 ERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
ER ++L+ ++P D+ A L E+I YVQ LQ +V+
Sbjct: 146 ERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVE 183
>gi|115448177|ref|NP_001047868.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|41053096|dbj|BAD08039.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113537399|dbj|BAF09782.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|215767339|dbj|BAG99567.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR +I+ER + L+E++P ++ A L E+I YVQ LQ++V+
Sbjct: 175 HSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVE 225
>gi|326489817|dbj|BAJ93982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 427
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 17/96 (17%)
Query: 4 TKGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINER 63
+KG +E E ++++ + TNS HS+ E+ RR KI+ER
Sbjct: 224 SKGKGAKEGSEKEDYIHVRARRGQATNS-----------------HSLAERLRREKISER 266
Query: 64 FQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
++L++++P + A L E+I YVQ LQ +V+
Sbjct: 267 MKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 302
>gi|125546085|gb|EAY92224.1| hypothetical protein OsI_13945 [Oryza sativa Indica Group]
Length = 263
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER +IL++++P ++ AS L E+I Y+Q LQ +V+
Sbjct: 145 HSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVE 195
>gi|359474203|ref|XP_002270239.2| PREDICTED: transcription factor GLABRA 3-like [Vitis vinifera]
Length = 633
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 41 KASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQK 100
+A I H ++E++RR KINERF +LR ++P +Q + S L + IEY++ L+ +V++
Sbjct: 427 EADEITLNHVLSERKRREKINERFSVLRSLVPSINQV-NKVSVLDDTIEYLKELKRRVEE 485
Query: 101 YEVS 104
E S
Sbjct: 486 LESS 489
>gi|357511583|ref|XP_003626080.1| Transcription factor SPATULA [Medicago truncatula]
gi|355501095|gb|AES82298.1| Transcription factor SPATULA [Medicago truncatula]
Length = 373
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 8 REEEDYEDDEFMSK--KEAASNITNSNAKDGKNSDKASVIRSK-HSVTEQRRRSKINERF 64
+ ED +D ++S +E NI N K S +K H+++E++RR KINE+
Sbjct: 169 KSHEDTDDSPYLSDNDEETQENIVKEKPVREGNRVKRSYRNAKVHNLSERKRRDKINEKI 228
Query: 65 QILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+ L+E+IP+ + K D AS L + I+Y++ L+ ++Q
Sbjct: 229 RALKELIPNCN-KMDKASMLDDAIDYLKTLKLQLQ 262
>gi|110738493|dbj|BAF01172.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 314
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L+E++P ++ A L E+I YVQ LQ++V+
Sbjct: 165 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 215
>gi|357113290|ref|XP_003558437.1| PREDICTED: transcription factor bHLH74-like [Brachypodium
distachyon]
Length = 296
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 13/111 (11%)
Query: 2 RTTKGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKAS------VIRSK------- 48
+ KG + + E M +E ++ K D S IR+K
Sbjct: 69 KCLKGGKRKGSGEGSSSMHSQEGTGAVSKREVNSEKAGDAESNREDYVHIRAKRGQATNN 128
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KINER + L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 129 HSLAERFRREKINERMKHLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVE 179
>gi|449493518|ref|XP_004159328.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 517
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER + L+E++P + A L E+I YVQ LQ +V+
Sbjct: 336 HSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVE 386
>gi|224124904|ref|XP_002319451.1| predicted protein [Populus trichocarpa]
gi|222857827|gb|EEE95374.1| predicted protein [Populus trichocarpa]
Length = 59
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRR +INE+ + L+E+IP+ + K D AS L E IEY++ LQ +VQ
Sbjct: 9 HNLSERRRRDRINEKMRALQELIPNCN-KVDKASMLDEAIEYLKTLQLQVQ 58
>gi|218191430|gb|EEC73857.1| hypothetical protein OsI_08622 [Oryza sativa Indica Group]
Length = 361
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR +I+ER + L+E++P ++ A L E+I YVQ LQ++V+
Sbjct: 175 HSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVE 225
>gi|169607505|ref|XP_001797172.1| hypothetical protein SNOG_06810 [Phaeosphaeria nodorum SN15]
gi|160701427|gb|EAT85461.2| hypothetical protein SNOG_06810 [Phaeosphaeria nodorum SN15]
Length = 335
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 25 ASNITNSNAKDGKNSDKAS---VIRSKHSVTEQRRRSKINERFQILREIIPHS-DQKRDT 80
AS + + K N++ A ++ HS+ E+RRRSK+NE F +L+++IP Q+
Sbjct: 133 ASTTSGTKRKQASNTNAAGRKIARKTAHSLIERRRRSKMNEEFGVLKDMIPACRGQEMHK 192
Query: 81 ASFLLEVIEYVQYLQEKV 98
+ L IEY++YL++ +
Sbjct: 193 LAILQASIEYMRYLEQCI 210
>gi|414591902|tpg|DAA42473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L++I+P ++ AS L E+I Y+Q LQ +V+
Sbjct: 134 HSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQVE 184
>gi|125664136|gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]
Length = 400
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR +I+ER ++L+E++P ++ A L E+I YVQ LQ++V+
Sbjct: 245 HSLAERVRRERISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 295
>gi|293333598|ref|NP_001167725.1| uncharacterized protein LOC100381413 [Zea mays]
gi|223943625|gb|ACN25896.1| unknown [Zea mays]
gi|414865638|tpg|DAA44195.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 211
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KINER ++L++++P ++ A L E+I YVQ LQ +++
Sbjct: 135 HSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIE 185
>gi|224067162|ref|XP_002302386.1| predicted protein [Populus trichocarpa]
gi|222844112|gb|EEE81659.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L+E++P ++ A L E+I YVQ LQ++V+
Sbjct: 174 HSLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 224
>gi|302398593|gb|ADL36591.1| BHLH domain class transcription factor [Malus x domestica]
Length = 531
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 12 DYEDDEFMSKKEAASNITNSNAKDGKNSDKAS---------------VIRSKHSVTEQRR 56
+Y+ DEF + + AK+G NS A+ + +K+ + E+RR
Sbjct: 297 NYDSDEFTENTK-----VDDGAKNGGNSSNANSTVTGGGGGHKGKKKGLPAKNLMAERRR 351
Query: 57 RSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEP--TK 114
R K+N+R +LR ++P K D AS L + IE YL+E +Q+ + + + P +
Sbjct: 352 RKKLNDRLYMLRSVVPKI-SKMDRASILGDAIE---YLKELLQRINNLHNELESIPPGSA 407
Query: 115 LMPWRNS-HWRVQNFATQPHAIKNGSGPGSM 144
L P N+ H AT P+ IK P S+
Sbjct: 408 LTPTGNTFHPLTPTPATLPNRIKEELCPSSL 438
>gi|240256101|ref|NP_194609.5| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
gi|378405153|sp|Q9SVU7.2|BH056_ARATH RecName: Full=Putative transcription factor bHLH056; AltName:
Full=Basic helix-loop-helix protein 56; Short=AtbHLH56;
Short=bHLH 56; AltName: Full=Transcription factor EN
106; AltName: Full=bHLH transcription factor bHLH056
gi|332660146|gb|AEE85546.1| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
Length = 445
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 20 SKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRD 79
SK +A + G S K S H++ E+RRR KINE+ + L+++IP + K
Sbjct: 231 SKLKAREETHGTEEARGSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCN-KST 289
Query: 80 TASFLLEVIEYVQYLQEKVQ 99
S L + IEYV+ LQ ++Q
Sbjct: 290 KVSTLDDAIEYVKSLQSQIQ 309
>gi|357148647|ref|XP_003574844.1| PREDICTED: transcription factor bHLH137-like [Brachypodium
distachyon]
Length = 294
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 13/98 (13%)
Query: 2 RTTKGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKIN 61
++ +G RE+ + ++EA + A+ G+ +D HS+ E+ RR +I+
Sbjct: 102 KSRRGKREKSSTD------QEEAPKGYIHVRARRGQATDS-------HSLAERVRRERIS 148
Query: 62 ERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
ER ++L+ ++P D+ A L E+I YVQ LQ +V+
Sbjct: 149 ERMRLLQTLVPGCDKVTGKALILDEIINYVQSLQNQVE 186
>gi|224094310|ref|XP_002310136.1| predicted protein [Populus trichocarpa]
gi|222853039|gb|EEE90586.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 50 SVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
SV + RR +I+ER +IL+ ++P K DTAS L E I YV++L+++VQ E
Sbjct: 169 SVAARHRRERISERMRILQRLVP-GGTKMDTASMLDEAIHYVKFLKKQVQSLE 220
>gi|357158920|ref|XP_003578282.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 415
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 17/96 (17%)
Query: 4 TKGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINER 63
+KG +E E ++++ + TNS HS+ E+ RR KI+ER
Sbjct: 224 SKGKGAKESSEKEDYIHVRARRGQATNS-----------------HSLAERLRREKISER 266
Query: 64 FQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
++L++++P + A L E+I YVQ LQ +V+
Sbjct: 267 MKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 302
>gi|224108619|ref|XP_002314910.1| predicted protein [Populus trichocarpa]
gi|222863950|gb|EEF01081.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 2 RTTKGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSK---------HSVT 52
++ KG+ E + D + S AS G + K I + HS+
Sbjct: 324 QSAKGSPETQQKGDQKPTSTTSKASGKQGKQGSQGSDQPKEEYIHVRARRGQATNSHSLA 383
Query: 53 EQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
E+ RR KI+ER + L++++P + A L E+I YVQ LQ +V+
Sbjct: 384 ERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 430
>gi|222424750|dbj|BAH20328.1| AT2G43010 [Arabidopsis thaliana]
Length = 409
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
Query: 16 DEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSD 75
DE +S +A N +N + + S A V H+++E+RRR +INER + L+E+IPH
Sbjct: 212 DESVSLSDAIGNKSNQRSGSNRRSRAAEV----HNLSERRRRDRINERMKALQELIPHCS 267
Query: 76 QKRDTASFLLEVIEYVQYLQEKVQ 99
K D AS L E I+Y++ LQ ++Q
Sbjct: 268 -KTDKASILDEAIDYLKSLQLQLQ 290
>gi|225432880|ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297737150|emb|CBI26351.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P S+ K D A+ L E+++YV++L+ +V+ +S
Sbjct: 162 HSIAERLRRERIAERMKALQELVPSSN-KTDRAAMLDEIVDYVKFLRLQVKVLSMS 216
>gi|242045042|ref|XP_002460392.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
gi|241923769|gb|EER96913.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
Length = 438
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L++++P + A L E+I YVQ LQ +V+
Sbjct: 267 HSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 317
>gi|357119169|ref|XP_003561318.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 240
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L++++P ++ AS L E+I Y+Q LQ +V+
Sbjct: 123 HSIAERARREKISERMKMLQDLVPGCNKVIGKASVLDEIINYIQALQRQVE 173
>gi|50509096|dbj|BAD30156.1| putative bHLH protein [Oryza sativa Japonica Group]
Length = 268
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER +IL++++P ++ AS L E+I Y+Q LQ +V+
Sbjct: 139 HSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVE 189
>gi|388519201|gb|AFK47662.1| unknown [Lotus japonicus]
Length = 274
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 22/105 (20%)
Query: 22 KEAASNIT---------NSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIP 72
K A SN+T + A+ G+ +D HS+ E+ RR KINE+ + L+ I+P
Sbjct: 139 KRAKSNVTEEEKEKEVVHVRARRGQATDS-------HSLAERVRRGKINEKLRCLQNIVP 191
Query: 73 HSDQKRDTASFLLEVIEYVQYLQEKVQKYEV------SYQDWSAE 111
+ A L E+I YVQ LQ +V+ + +Y D+++E
Sbjct: 192 GCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAASTYYDFNSE 236
>gi|255540091|ref|XP_002511110.1| DNA binding protein, putative [Ricinus communis]
gi|223550225|gb|EEF51712.1| DNA binding protein, putative [Ricinus communis]
Length = 422
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER +IL+ ++P D+ A L E+I YVQ LQ +V+
Sbjct: 183 HSLAERVRREKISERMKILQRLVPGCDKVTGKALMLDEIINYVQSLQNQVE 233
>gi|238005608|gb|ACR33839.1| unknown [Zea mays]
gi|413938469|gb|AFW73020.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 246
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR +I+ER + L+E++P + A L E+I YVQ LQ++V+
Sbjct: 157 HSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVE 207
>gi|407926277|gb|EKG19245.1| hypothetical protein MPH_03506 [Macrophomina phaseolina MS6]
Length = 431
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPH-SDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
++ HS+ E+RRRSK+NE F +L+++IP + Q+ + L IEY++YL+ V + + +
Sbjct: 166 KTAHSLIERRRRSKMNEEFGVLKDMIPACAGQEMHKLAILQASIEYMRYLERCVAELKAA 225
>gi|414865637|tpg|DAA44194.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 289
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KINER ++L++++P ++ A L E+I YVQ LQ +++
Sbjct: 135 HSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIE 185
>gi|242082417|ref|XP_002445977.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
gi|241942327|gb|EES15472.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
Length = 343
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 48 KHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+HS+ E+ RR KI+ER ++L++++P + A L E+I YVQ LQ +V+
Sbjct: 184 RHSLAERLRREKISERMKLLQDLVPGCTKVTGKAVMLDEIINYVQSLQRQVE 235
>gi|414865635|tpg|DAA44192.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 185
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KINER ++L++++P ++ A L E+I YVQ LQ +++
Sbjct: 109 HSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIE 159
>gi|297742516|emb|CBI34665.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 41 KASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQK 100
+A I H ++E++RR KINERF +LR ++P +Q + S L + IEY++ L+ +V++
Sbjct: 337 EADEITLNHVLSERKRREKINERFSVLRSLVPSINQV-NKVSVLDDTIEYLKELKRRVEE 395
Query: 101 YEVS 104
E S
Sbjct: 396 LESS 399
>gi|226504718|ref|NP_001150409.1| LOC100284039 [Zea mays]
gi|195639036|gb|ACG38986.1| protein SPATULA [Zea mays]
gi|414873439|tpg|DAA51996.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 255
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L++++P ++ AS L E+I Y+Q LQ +V+
Sbjct: 137 HSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQVE 187
>gi|194688984|gb|ACF78576.1| unknown [Zea mays]
gi|238014612|gb|ACR38341.1| unknown [Zea mays]
gi|413952840|gb|AFW85489.1| pi starvation-induced transcription factor1 [Zea mays]
Length = 481
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR KI++R + L++++P+S+ K D AS L E+I++V++LQ +V+ +S
Sbjct: 331 HSIAERLRREKISDRMKNLQDLVPNSN-KADKASMLDEIIDHVKFLQLQVKVLSMS 385
>gi|414885458|tpg|DAA61472.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKV 98
HS+ E+ RR +I ER + L+E++ +++ K D AS L E+I+YV++LQ +V
Sbjct: 128 HSIAERLRRERIAERMKALQELVSNAN-KTDKASMLDEIIDYVKFLQLQV 176
>gi|414865634|tpg|DAA44191.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 262
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KINER ++L++++P ++ A L E+I YVQ LQ +++
Sbjct: 109 HSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIE 159
>gi|326505754|dbj|BAJ95548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 382
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H + E+RRR KIN+RF L +IP +K D A+ L + ++YV+ LQEKV+ E
Sbjct: 182 HIIAERRRREKINQRFIELSTVIP-GLKKMDKATILGDAVKYVRELQEKVKTME 234
>gi|291506702|gb|ADE08783.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506704|gb|ADE08784.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506706|gb|ADE08785.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506708|gb|ADE08786.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506710|gb|ADE08787.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506712|gb|ADE08788.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
Length = 430
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
Query: 16 DEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSD 75
DE +S +A N +N + + S A V H+++E+RRR +INER + L+E+IPH
Sbjct: 233 DESVSLSDAIGNKSNQRSGSNRRSRAAEV----HNLSERRRRDRINERMKALQELIPHCS 288
Query: 76 QKRDTASFLLEVIEYVQYLQEKVQ 99
K D AS L E I+Y++ LQ ++Q
Sbjct: 289 -KTDKASILDEAIDYLKSLQLQLQ 311
>gi|30689218|ref|NP_565991.2| transcription factor PIF4 [Arabidopsis thaliana]
gi|28201855|sp|Q8W2F3.1|PIF4_ARATH RecName: Full=Transcription factor PIF4; AltName: Full=Basic
helix-loop-helix protein 9; Short=AtbHLH9; Short=bHLH 9;
AltName: Full=Phytochrome-interacting factor 4; AltName:
Full=Short under red-light 2; AltName:
Full=Transcription factor EN 102; AltName: Full=bHLH
transcription factor bHLH009
gi|18026966|gb|AAL55716.1|AF251694_1 putative transcription factor BHLH9 [Arabidopsis thaliana]
gi|21068661|emb|CAD29449.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|222423257|dbj|BAH19605.1| AT2G43010 [Arabidopsis thaliana]
gi|225898591|dbj|BAH30426.1| hypothetical protein [Arabidopsis thaliana]
gi|291506714|gb|ADE08789.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506716|gb|ADE08790.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506718|gb|ADE08791.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506720|gb|ADE08792.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506722|gb|ADE08793.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506724|gb|ADE08794.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506726|gb|ADE08795.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506728|gb|ADE08796.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|330255103|gb|AEC10197.1| transcription factor PIF4 [Arabidopsis thaliana]
Length = 430
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
Query: 16 DEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSD 75
DE +S +A N +N + + S A V H+++E+RRR +INER + L+E+IPH
Sbjct: 233 DESVSLSDAIGNKSNQRSGSNRRSRAAEV----HNLSERRRRDRINERMKALQELIPHCS 288
Query: 76 QKRDTASFLLEVIEYVQYLQEKVQ 99
K D AS L E I+Y++ LQ ++Q
Sbjct: 289 -KTDKASILDEAIDYLKSLQLQLQ 311
>gi|414869094|tpg|DAA47651.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 345
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H + E+RRR KIN+RF L +IP +K D A+ L + ++YV+ LQEKV+
Sbjct: 201 HIIAERRRREKINQRFIELSTVIP-GLKKMDKATILGDAVKYVRELQEKVK 250
>gi|357143431|ref|XP_003572919.1| PREDICTED: transcription factor SPATULA-like [Brachypodium
distachyon]
Length = 312
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRR +INE+ + L+ ++P+S K D AS L + IEY++ LQ +VQ
Sbjct: 70 HNLSEKRRRCRINEKMKALQSLVPNSS-KTDKASMLDDAIEYLKQLQLQVQ 119
>gi|413923609|gb|AFW63541.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR +I+ER + L+E++P + A L E+I YVQ LQ++V+
Sbjct: 154 HSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVE 204
>gi|168020611|ref|XP_001762836.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685945|gb|EDQ72337.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 72
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
SV + RR KI+ER ++L ++IP + K DTA+ L E IEYV++LQ +VQ E
Sbjct: 19 QSVAARHRRKKISERIRVLEKLIPGGN-KMDTATMLDEAIEYVKFLQLQVQILE 71
>gi|115491663|ref|XP_001210459.1| hypothetical protein ATEG_00373 [Aspergillus terreus NIH2624]
gi|114197319|gb|EAU39019.1| hypothetical protein ATEG_00373 [Aspergillus terreus NIH2624]
Length = 384
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHS-DQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
++ HS+ E+RRRSK+NE F L+++IP Q + L IEYV YL++ +Q + +
Sbjct: 157 KTAHSLIERRRRSKMNEEFATLKDMIPACRGQDMHKLAILQASIEYVNYLEKCIQDLKTA 216
>gi|147861941|emb|CAN78766.1| hypothetical protein VITISV_044397 [Vitis vinifera]
Length = 805
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 14 EDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPH 73
E D + EA S +S++ DG S AS K+ V+E+ RR K+NER LR ++P+
Sbjct: 21 EFDSWGGLDEAFSGYYDSSSPDGAASSAAS----KNIVSERNRRKKLNERLFALRAVVPN 76
Query: 74 SDQKRDTASFLLEVIEYVQYLQEK 97
K D AS + + I+Y+Q L E+
Sbjct: 77 IS-KMDKASIIKDAIDYIQDLHEQ 99
>gi|125588289|gb|EAZ28953.1| hypothetical protein OsJ_12999 [Oryza sativa Japonica Group]
Length = 224
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER +IL++++P ++ AS L E+I Y+Q LQ +V+
Sbjct: 106 HSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVE 156
>gi|225455954|ref|XP_002276500.1| PREDICTED: transcription factor BEE 3 [Vitis vinifera]
gi|297734215|emb|CBI15462.3| unnamed protein product [Vitis vinifera]
Length = 265
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 28 ITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEV 87
+ + A+ G+ +D HS+ E+ RR KINER + L++I+P + A L E+
Sbjct: 144 VVHVRARRGQATDS-------HSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEI 196
Query: 88 IEYVQYLQEKVQ 99
I YVQ LQ +V+
Sbjct: 197 INYVQSLQNQVE 208
>gi|30689224|ref|NP_850381.1| transcription factor PIF4 [Arabidopsis thaliana]
gi|330255104|gb|AEC10198.1| transcription factor PIF4 [Arabidopsis thaliana]
Length = 428
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
Query: 16 DEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSD 75
DE +S +A N +N + + S A V H+++E+RRR +INER + L+E+IPH
Sbjct: 233 DESVSLSDAIGNKSNQRSGSNRRSRAAEV----HNLSERRRRDRINERMKALQELIPHCS 288
Query: 76 QKRDTASFLLEVIEYVQYLQEKVQ 99
K D AS L E I+Y++ LQ ++Q
Sbjct: 289 -KTDKASILDEAIDYLKSLQLQLQ 311
>gi|326490429|dbj|BAJ84878.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 376
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H + E+RRR KIN+RF L +IP +K D A+ L + ++YV+ LQEKV+ E
Sbjct: 176 HIIAERRRREKINQRFIELSTVIP-GLKKMDKATILGDAVKYVRELQEKVKTME 228
>gi|223945659|gb|ACN26913.1| unknown [Zea mays]
Length = 267
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KINER ++L++++P ++ A L E+I YVQ LQ +++
Sbjct: 135 HSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIE 185
>gi|224100187|ref|XP_002311780.1| predicted protein [Populus trichocarpa]
gi|222851600|gb|EEE89147.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER +IL++I+P ++ A L E+I Y+Q LQ +V+
Sbjct: 152 HSLAERARREKISERMKILQDIVPGCNKVTGKALVLDEIINYIQSLQRQVE 202
>gi|414869721|tpg|DAA48278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 314
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 13/95 (13%)
Query: 5 KGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERF 64
+ N EE+ +DE A + A+ G+ +D HS+ E+ RR +I+ER
Sbjct: 119 EANTEEKSATEDE------ATRGYIHVRARRGQATDS-------HSLAERVRRERISERM 165
Query: 65 QILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
++L+ ++P D+ A L E+I YVQ LQ +V+
Sbjct: 166 RMLQALVPGCDKVTGKALILDEIINYVQSLQNQVE 200
>gi|168012170|ref|XP_001758775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689912|gb|EDQ76281.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 95
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 39/50 (78%)
Query: 50 SVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
S+ E+ RRS+I+ER + L++++P+ D++ +TA L E +EYV++LQ +V+
Sbjct: 27 SIAERNRRSRISERMKKLQDLVPNMDKQTNTADMLDEAVEYVKHLQTQVK 76
>gi|297602519|ref|NP_001052532.2| Os04g0350700 [Oryza sativa Japonica Group]
gi|57834129|emb|CAE05521.2| OSJNBa0038P21.14 [Oryza sativa Japonica Group]
gi|215766234|dbj|BAG98462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675358|dbj|BAF14446.2| Os04g0350700 [Oryza sativa Japonica Group]
Length = 263
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 21 KKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDT 80
K E A + + A+ G+ +D HS+ E+ RR +I+ER ++L+ ++P ++
Sbjct: 71 KPEPAKDYIHVRARRGQATDS-------HSLAERVRRERISERMKLLQSLVPGCNKITGK 123
Query: 81 ASFLLEVIEYVQYLQEKVQ 99
A L E+I YVQ LQ +V+
Sbjct: 124 ALMLDEIINYVQSLQRQVE 142
>gi|356562791|ref|XP_003549652.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 229
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER +IL++I+P ++ A L E+I Y+Q LQ +V+
Sbjct: 111 HSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVE 161
>gi|147786897|emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]
Length = 569
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 23 EAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTAS 82
EA + + A+ G+ +D HS+ E+ RR KI+ER + L++++P ++ A
Sbjct: 364 EAPKDYIHVRARRGQATDS-------HSLAERVRREKISERMKFLQDLVPGCNKVTGKAV 416
Query: 83 FLLEVIEYVQYLQEKVQ 99
L E+I YVQ LQ +V+
Sbjct: 417 MLDEIINYVQSLQRQVE 433
>gi|359477937|ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like [Vitis vinifera]
Length = 569
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 23 EAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTAS 82
EA + + A+ G+ +D HS+ E+ RR KI+ER + L++++P ++ A
Sbjct: 364 EAPKDYIHVRARRGQATDS-------HSLAERVRREKISERMKFLQDLVPGCNKVTGKAV 416
Query: 83 FLLEVIEYVQYLQEKVQ 99
L E+I YVQ LQ +V+
Sbjct: 417 MLDEIINYVQSLQRQVE 433
>gi|339716200|gb|AEJ88339.1| putative MYC protein [Tamarix hispida]
Length = 301
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER +IL++++P ++ A L E+I Y+Q LQ +V+
Sbjct: 180 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 230
>gi|323388949|gb|ADX60279.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 294
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P+++ K D A+ L E+++YV++L+ +V+ +S
Sbjct: 144 HSIAERLRRERIAERMRALQELVPNTN-KTDRAAMLDEILDYVKFLRLQVKVLSIS 198
>gi|212721642|ref|NP_001131806.1| uncharacterized protein LOC100193179 [Zea mays]
gi|194692596|gb|ACF80382.1| unknown [Zea mays]
gi|414869722|tpg|DAA48279.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 315
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 13/95 (13%)
Query: 5 KGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERF 64
+ N EE+ +DE A + A+ G+ +D HS+ E+ RR +I+ER
Sbjct: 119 EANTEEKSATEDE------ATRGYIHVRARRGQATDS-------HSLAERVRRERISERM 165
Query: 65 QILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
++L+ ++P D+ A L E+I YVQ LQ +V+
Sbjct: 166 RMLQALVPGCDKVTGKALILDEIINYVQSLQNQVE 200
>gi|168048993|ref|XP_001776949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671650|gb|EDQ58198.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 38/51 (74%)
Query: 50 SVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQK 100
S+ E+ RR+KI+ER + L++++P D++ +T+ L E +EYV+ LQ +VQ+
Sbjct: 395 SIAERVRRTKISERMKKLQDLVPSMDKQTNTSDMLDETVEYVKSLQRQVQE 445
>gi|168059612|ref|XP_001781795.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666702|gb|EDQ53349.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 20 SKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRD 79
SK A + + A+ G+ +D HS+ E+ RR KI+ER + L++++P +
Sbjct: 430 SKDHAKQDYIHVRARRGQATDS-------HSLAERVRREKISERMKYLQDLVPGCSKVTG 482
Query: 80 TASFLLEVIEYVQYLQEKVQ 99
A L E+I YVQ LQ +V+
Sbjct: 483 KAVMLDEIINYVQSLQRQVE 502
>gi|452847585|gb|EME49517.1| hypothetical protein DOTSEDRAFT_68329 [Dothistroma septosporum
NZE10]
Length = 413
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHS-DQKRDTASFLLEVIEYVQYLQEKV 98
++ HS+ E+RRRSK+NE F +L+++IP Q+ + L IEY++YL++ V
Sbjct: 153 KTAHSLIERRRRSKMNEEFGVLKDMIPACKGQEMHKLAILQASIEYLRYLEQCV 206
>gi|15233768|ref|NP_192657.1| transcription factor bHLH81 [Arabidopsis thaliana]
gi|75311758|sp|Q9M0R0.1|BH081_ARATH RecName: Full=Transcription factor bHLH81; AltName: Full=Basic
helix-loop-helix protein 81; Short=AtbHLH81; Short=bHLH
81; AltName: Full=Transcription factor EN 72; AltName:
Full=bHLH transcription factor bHLH081
gi|7267561|emb|CAB78042.1| putative protein [Arabidopsis thaliana]
gi|34146832|gb|AAQ62424.1| At4g09180 [Arabidopsis thaliana]
gi|110741264|dbj|BAF02182.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332657332|gb|AEE82732.1| transcription factor bHLH81 [Arabidopsis thaliana]
Length = 262
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 39/52 (75%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQK 100
S+ E+ RR++I++R + L+E++P+ D++ +TA L E +EYV+ LQ ++Q+
Sbjct: 195 RSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQE 246
>gi|414885459|tpg|DAA61473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 344
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKV 98
HS+ E+ RR +I ER + L+E++ +++ K D AS L E+I+YV++LQ +V
Sbjct: 156 HSIAERLRRERIAERMKALQELVSNAN-KTDKASMLDEIIDYVKFLQLQV 204
>gi|293332753|ref|NP_001168647.1| uncharacterized protein LOC100382434 [Zea mays]
gi|223949907|gb|ACN29037.1| unknown [Zea mays]
gi|414869093|tpg|DAA47650.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 393
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H + E+RRR KIN+RF L +IP +K D A+ L + ++YV+ LQEKV+
Sbjct: 201 HIIAERRRREKINQRFIELSTVIP-GLKKMDKATILGDAVKYVRELQEKVK 250
>gi|1086536|gb|AAC49217.1| transcriptional activator Ra homolog, partial [Oryza rufipogon]
Length = 129
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 51 VTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQ 106
++E+RRR K+NE F IL+ ++P S K D AS L E I Y++ L+++V++ E S Q
Sbjct: 1 MSERRRREKLNEMFLILKSVVP-SIHKVDKASILAETIAYLKDLEKRVEELESSSQ 55
>gi|242087181|ref|XP_002439423.1| hypothetical protein SORBIDRAFT_09g006196 [Sorghum bicolor]
gi|241944708|gb|EES17853.1| hypothetical protein SORBIDRAFT_09g006196 [Sorghum bicolor]
Length = 384
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 37/55 (67%)
Query: 48 KHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+H ++E++RR K+N+ F+ LR ++P + K+D AS L+ +YV L+ +V + E
Sbjct: 238 QHVLSERKRRQKLNDSFKALRTVLPPASSKKDKASILIRARDYVSTLESRVSELE 292
>gi|297606176|ref|NP_001058071.2| Os06g0613500 [Oryza sativa Japonica Group]
gi|255677227|dbj|BAF19985.2| Os06g0613500, partial [Oryza sativa Japonica Group]
Length = 178
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KIN R ++L+E++P + TA L E+I +VQ LQ +V+
Sbjct: 10 HSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVE 60
>gi|226495537|ref|NP_001141393.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194704318|gb|ACF86243.1| unknown [Zea mays]
gi|413923610|gb|AFW63542.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 342
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR +I+ER + L+E++P + A L E+I YVQ LQ++V+
Sbjct: 154 HSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVE 204
>gi|225441702|ref|XP_002282897.1| PREDICTED: transcription factor bHLH60 [Vitis vinifera]
gi|297739713|emb|CBI29895.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KIN R ++L+E++P ++ TA L E+I +VQ LQ +V+
Sbjct: 208 HSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIISHVQSLQRQVE 258
>gi|162462600|ref|NP_001105339.1| anthocyanin regulatory Lc protein [Zea mays]
gi|114156|sp|P13526.1|ARLC_MAIZE RecName: Full=Anthocyanin regulatory Lc protein
gi|168601|gb|AAA33504.1| regulatory protein [Zea mays]
gi|89473790|gb|ABD72707.1| anthocyanin regulatory LC protein [Zea mays]
Length = 610
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
H ++E++RR K+NE F +L+ ++P S + + AS L E I Y++ LQ +VQ+ E S
Sbjct: 417 HVMSERKRREKLNEMFLVLKSLLP-SIHRVNKASILAETIAYLKELQRRVQELESS 471
>gi|356516734|ref|XP_003527048.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 269
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER +IL++++P ++ A L E+I Y+Q LQ +V+
Sbjct: 150 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 200
>gi|258568836|ref|XP_002585162.1| predicted protein [Uncinocarpus reesii 1704]
gi|237906608|gb|EEP81009.1| predicted protein [Uncinocarpus reesii 1704]
Length = 399
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHS-DQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
R+ HS+ E+RRRSK+NE F L+ +IP Q+ + L IEYV YL++ + + +
Sbjct: 143 RTAHSLIERRRRSKMNEEFATLKNMIPACQGQEMHKLAILQASIEYVNYLEQCIVDLKAA 202
Query: 105 YQDWSAEPT 113
+ PT
Sbjct: 203 NNRRDSTPT 211
>gi|218184992|gb|EEC67419.1| hypothetical protein OsI_34609 [Oryza sativa Indica Group]
Length = 465
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 39 SDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKV 98
S K S + H+ +E++RR +IN++ + L++++P+S K D AS L EVI+Y++ LQ +V
Sbjct: 270 STKRSRAAAIHNESERKRRDRINQKMKTLQKLVPNSS-KTDKASMLDEVIDYLKQLQAQV 328
Query: 99 Q 99
Q
Sbjct: 329 Q 329
>gi|18542170|gb|AAL75479.1|AF466202_5 r1-B73 [Zea mays]
gi|413919290|gb|AFW59222.1| plant color component at R1 [Zea mays]
Length = 585
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
H ++E++RR K+NE F +L+ ++P S + + AS L E I Y++ LQ +VQ+ E S
Sbjct: 392 HVMSERKRREKLNEMFLVLKSLLP-SIHRVNKASILAETIAYLKELQRRVQELESS 446
>gi|413923611|gb|AFW63543.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 352
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR +I+ER + L+E++P + A L E+I YVQ LQ++V+
Sbjct: 154 HSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVE 204
>gi|242032639|ref|XP_002463714.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
gi|241917568|gb|EER90712.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
Length = 253
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L++++P ++ AS L E+I Y+Q LQ +V+
Sbjct: 135 HSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQVE 185
>gi|303320363|ref|XP_003070181.1| bHLH family transcription factor [Coccidioides posadasii C735 delta
SOWgp]
gi|240109867|gb|EER28036.1| bHLH family transcription factor [Coccidioides posadasii C735 delta
SOWgp]
Length = 435
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHS-DQKRDTASFLLEVIEYVQYLQEKV 98
R+ HS+ E+RRRSK+NE F L+ +IP Q+ + L IEYV YL++ +
Sbjct: 169 RTAHSLIERRRRSKMNEEFATLKNMIPACKGQEMHKLAILQASIEYVNYLEQCI 222
>gi|223702430|gb|ACN21646.1| putative basic helix-loop-helix protein BHLH5 [Lotus japonicus]
gi|388495576|gb|AFK35854.1| unknown [Lotus japonicus]
Length = 268
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 17/98 (17%)
Query: 2 RTTKGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKIN 61
R K EEED + ++ + + A+ G+ +D HS+ E+ RR KIN
Sbjct: 133 RVKKNMMEEED----------KKSTQVVHVRARRGQATDS-------HSLAERVRRGKIN 175
Query: 62 ERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
E+ + L+ I+P + A L E+I YVQ LQ +V+
Sbjct: 176 EKLKCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQVE 213
>gi|255648089|gb|ACU24499.1| unknown [Glycine max]
Length = 229
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER +IL++I+P ++ A L E+I Y+Q LQ +V+
Sbjct: 111 HSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVE 161
>gi|1086526|gb|AAC49212.1| transcriptional activator Ra homolog, partial [Oryza australiensis]
Length = 126
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 51 VTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQ 106
++E+RRR K+NE F IL+ ++P S K D AS L E I Y++ L+++V++ E S Q
Sbjct: 1 MSERRRREKLNEMFLILKSVVP-SIHKVDKASILAETIAYLKELEKRVEELESSNQ 55
>gi|115479723|ref|NP_001063455.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|50726625|dbj|BAD34345.1| TA1 protein-like [Oryza sativa Japonica Group]
gi|113631688|dbj|BAF25369.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|215768249|dbj|BAH00478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388941|gb|ADX60275.1| bHLH- transcription factor [Oryza sativa Japonica Group]
Length = 428
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L++++P + A L E+I YVQ LQ +V+
Sbjct: 259 HSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 309
>gi|11761480|gb|AAG28811.2|AC079374_14 helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
Length = 166
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 25/136 (18%)
Query: 5 KGNREEEDYEDDEFMSKKEAASN---------ITNSNAKDGKNSDKASVIRSKHSVTEQR 55
KGN+EE + S++E A N + + AK G+ +D HS+ E+
Sbjct: 12 KGNKEESGSKRRRKRSEEEEAMNGDETQKPKDVVHVRAKRGQATDS-------HSLAERV 64
Query: 56 RRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSA----- 110
RR KINER + L++++P + A L +I+YV+ LQ +++ + SA
Sbjct: 65 RREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFLSMKLSAASACYDLN 124
Query: 111 ----EPTKLMPWRNSH 122
EPT + N H
Sbjct: 125 SLDIEPTDIFQGGNIH 140
>gi|15221563|ref|NP_177058.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|79590003|ref|NP_849863.2| transcription factor bHLH49 [Arabidopsis thaliana]
gi|75333634|sp|Q9CAA9.1|BH049_ARATH RecName: Full=Transcription factor bHLH49; AltName: Full=Basic
helix-loop-helix protein 49; Short=AtbHLH49; Short=bHLH
49; AltName: Full=Transcription factor EN 82; AltName:
Full=bHLH transcription factor bHLH049
gi|12323211|gb|AAG51583.1|AC011665_4 putative DNA-binding protein [Arabidopsis thaliana]
gi|22135841|gb|AAM91106.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|25090290|gb|AAN72270.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|332196740|gb|AEE34861.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|332196741|gb|AEE34862.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 486
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER + L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 314 HSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 364
>gi|224130812|ref|XP_002320931.1| predicted protein [Populus trichocarpa]
gi|222861704|gb|EEE99246.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 3 TTKGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINE 62
T+ R+ ED E + S + G +A+ I H+++E++RR +IN+
Sbjct: 337 TSSLERQYEDTEGTAYSSDDLEEEEQVPARGSAGSKRRRATEI---HNLSERKRRDRINK 393
Query: 63 RFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+ + L+++IP+S+ K D AS L E I+Y++ LQ +VQ
Sbjct: 394 KMRALQDLIPNSN-KVDKASMLGEAIDYLKSLQLQVQ 429
>gi|218193473|gb|EEC75900.1| hypothetical protein OsI_12961 [Oryza sativa Indica Group]
Length = 380
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 48 KHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQD 107
+H + E++RR KIN+RF L +IP +K D A+ L + + YV+ LQEK+ + E +Q+
Sbjct: 187 EHIIAERKRREKINQRFIELSTVIP-GLKKMDKATILSDAVRYVKELQEKLSELE-QHQN 244
Query: 108 WSAEPTKLM 116
E L+
Sbjct: 245 GGVESAILL 253
>gi|119184389|ref|XP_001243114.1| hypothetical protein CIMG_07010 [Coccidioides immitis RS]
gi|392866000|gb|EAS31860.2| hypothetical protein CIMG_07010 [Coccidioides immitis RS]
Length = 432
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHS-DQKRDTASFLLEVIEYVQYLQEKV 98
R+ HS+ E+RRRSK+NE F L+ +IP Q+ + L IEYV YL++ +
Sbjct: 168 RTAHSLIERRRRSKMNEEFATLKNMIPACKGQEMHKLAILQASIEYVNYLEQCI 221
>gi|297795891|ref|XP_002865830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297311665|gb|EFH42089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 20 SKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRD 79
SK+E + + A+ G+ +D HS+ E+ RR KI+ER + L+ ++P D+
Sbjct: 126 SKEEPPKDYIHVRARRGQATDS-------HSLAERVRREKISERMRTLQNLVPGCDKVTG 178
Query: 80 TASFLLEVIEYVQYLQEKVQ 99
A L E+I YVQ LQ +V+
Sbjct: 179 KALMLDEIINYVQTLQNQVE 198
>gi|118486519|gb|ABK95099.1| unknown [Populus trichocarpa]
Length = 561
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 3 TTKGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINE 62
T+ R+ ED E + S + G +A+ I H+++E++RR +IN+
Sbjct: 343 TSSLERQYEDTEGTAYSSDDLEEEEQVPARGSAGSKRRRATEI---HNLSERKRRDRINK 399
Query: 63 RFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+ + L+++IP+S+ K D AS L E I+Y++ LQ +VQ
Sbjct: 400 KMRALQDLIPNSN-KVDKASMLGEAIDYLKSLQLQVQ 435
>gi|79320926|ref|NP_001031255.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|227204401|dbj|BAH57052.1| AT1G68920 [Arabidopsis thaliana]
gi|332196742|gb|AEE34863.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 485
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER + L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 313 HSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 363
>gi|162461234|ref|NP_001106073.1| anthocyanin regulatory R-S protein [Zea mays]
gi|114217|sp|P13027.1|ARRS_MAIZE RecName: Full=Anthocyanin regulatory R-S protein
gi|22472|emb|CAA33805.1| unnamed protein product [Zea mays]
Length = 612
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
H ++E++RR K+NE F +L+ ++P S + + AS L E I Y++ LQ +VQ+ E S
Sbjct: 419 HVMSERKRREKLNEMFLVLKSLLP-SIHRVNKASILAETIAYLKELQRRVQELESS 473
>gi|414871982|tpg|DAA50539.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 489
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 42 ASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKY 101
A+ H + E++RR KIN+RF L +IP +K D A+ LL+ Y++ LQEK++
Sbjct: 140 AAAYAKDHIIAERKRREKINQRFIELSTVIP-GLKKMDKATILLDATRYLKELQEKLKDL 198
Query: 102 E 102
E
Sbjct: 199 E 199
>gi|290768004|gb|ADD60710.1| putative TA1 protein [Oryza brachyantha]
Length = 426
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 1 MRTTKGNREEEDYEDDEFMSKKE---AASNITNSNAKDGKNSDKASVIRSK--------- 48
++ +G E + E+DE K A+ + AKD S K I +
Sbjct: 200 VKHVEGGEEPQKNENDEKDEPKRSSVASGKSSGKQAKDNAGSPKEEYIHVRARRGQATNS 259
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER + L++++P + A L E+I YVQ LQ +V+
Sbjct: 260 HSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 310
>gi|222628662|gb|EEE60794.1| hypothetical protein OsJ_14380 [Oryza sativa Japonica Group]
Length = 293
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 21 KKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDT 80
K E A + + A+ G+ +D HS+ E+ RR +I+ER ++L+ ++P ++
Sbjct: 101 KPEPAKDYIHVRARRGQATDS-------HSLAERVRRERISERMKLLQSLVPGCNKITGK 153
Query: 81 ASFLLEVIEYVQYLQEKVQ 99
A L E+I YVQ LQ +V+
Sbjct: 154 ALMLDEIINYVQSLQRQVE 172
>gi|152968456|gb|ABS50251.1| bHLH transcriptional factor [Malus x domestica]
Length = 531
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 27/143 (18%)
Query: 12 DYEDDEFMSKKEAASNITNSNAKDGKNSDKAS---------------VIRSKHSVTEQRR 56
+Y+ DEF + + AK+G NS A+ + +K+ + E+RR
Sbjct: 297 NYDSDEFTENTK-----VDDGAKNGGNSSNANSTVTGGGGGHKGKKKGLPAKNLMAERRR 351
Query: 57 RSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEP--TK 114
R K+N+R +LR ++P K D AS L + IE YL+E +Q+ + + + P +
Sbjct: 352 RKKLNDRLYMLRSVVPKI-SKMDRASILGDAIE---YLKELLQRINNLHNELESIPPGSA 407
Query: 115 LMPWRNS-HWRVQNFATQPHAIK 136
L P N+ H AT P+ IK
Sbjct: 408 LTPTGNTFHPLTPTPATLPNRIK 430
>gi|218198545|gb|EEC80972.1| hypothetical protein OsI_23697 [Oryza sativa Indica Group]
Length = 286
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KIN R ++L+E++P + TA L E+I +VQ LQ +V+
Sbjct: 118 HSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVE 168
>gi|147771925|emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
Length = 337
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P S+ K D A+ L E+++YV++L+ +V+ +S
Sbjct: 186 HSIAERLRRERIAERMKALQELVPSSN-KTDRAAMLDEIVDYVKFLRLQVKVLSMS 240
>gi|8052457|emb|CAB92300.1| transcription factor [Zea mays]
Length = 611
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
H ++E++RR K+NE F +L+ ++P S + + AS L E I Y++ LQ +VQ+ E S
Sbjct: 419 HVMSERKRREKLNEMFLVLKSLLP-SIHRVNKASILAETIAYLKELQRRVQELESS 473
>gi|297826127|ref|XP_002880946.1| Fe-deficiency induced transcription factor 1 [Arabidopsis lyrata
subsp. lyrata]
gi|297326785|gb|EFH57205.1| Fe-deficiency induced transcription factor 1 [Arabidopsis lyrata
subsp. lyrata]
Length = 318
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 24/127 (18%)
Query: 6 GNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQ 65
G EEEDY D + ++++ TN++ S K RS+ ++E+RRR ++ ++
Sbjct: 99 GEEEEEDYNDGD-----DSSATTTNNDG-----SRKTKTDRSRTLISERRRRGRMKDKLY 148
Query: 66 ILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV-------------SYQDWSAEP 112
LR ++P+ K D AS + + + YVQ LQ + +K + YQ+ + +
Sbjct: 149 ALRSLVPNI-TKMDKASIVGDAVSYVQELQSQAKKLKSDIAGLEASLNSTGGYQEPAPDA 207
Query: 113 TKLMPWR 119
K P+R
Sbjct: 208 QKTQPFR 214
>gi|168025278|ref|XP_001765161.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683480|gb|EDQ69889.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 829
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQD 107
H E++RR K+N+RF LR ++P+ K D AS L + I ++ +LQEK+Q E+ +D
Sbjct: 622 HVQAERQRREKLNKRFYALRAVVPNV-SKMDKASLLGDAIAHINHLQEKLQDAEMRIKD 679
>gi|77556222|gb|ABA99018.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125579480|gb|EAZ20626.1| hypothetical protein OsJ_36241 [Oryza sativa Japonica Group]
Length = 198
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 20/107 (18%)
Query: 12 DYEDDEFMSKKEAASNITNSNAKDGKN---SDKASVIRSKHSVTE--------------- 53
DY+DD F+S +E D +N ++++ +R+K SV++
Sbjct: 63 DYQDDSFVSAEETTIGNKRKVQMDTENELMTNRSKEVRTKMSVSKACKHSVSAESSQSYY 122
Query: 54 -QRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+ RR +INER +IL+E+IP+ K D ++ L E I+YV++L +++
Sbjct: 123 AKNRRQRINERLRILQELIPNG-TKVDISTMLEEAIQYVKFLHLQIK 168
>gi|413943655|gb|AFW76304.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 370
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KIN R ++L+E++P + TA L E+I +VQ LQ +V+
Sbjct: 168 HSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVE 218
>gi|378729244|gb|EHY55703.1| hypothetical protein HMPREF1120_03828 [Exophiala dermatitidis
NIH/UT8656]
Length = 575
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHSDQ-KRDTASFLLEVIEYVQYLQEKVQKYEV 103
++ HS+ E+RRRSK+NE F +L+++IP + + + L IEYV+YL+ V + +
Sbjct: 204 KTAHSIIERRRRSKMNEEFGVLKDMIPACEGVEMHKLAILQAGIEYVRYLEGCVAQLKA 262
>gi|302783621|ref|XP_002973583.1| hypothetical protein SELMODRAFT_16039 [Selaginella moellendorffii]
gi|300158621|gb|EFJ25243.1| hypothetical protein SELMODRAFT_16039 [Selaginella moellendorffii]
Length = 169
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
SK+ V+E++RR K+NER LR I+P K D AS + + I+YVQ LQ KVQ+ +
Sbjct: 6 SKNLVSERKRRKKLNERLYSLRAIVPKIS-KMDKASIVADAIDYVQELQGKVQELQ 60
>gi|20127044|gb|AAM10942.1|AF488584_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 486
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER + L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 314 HSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 364
>gi|3127045|gb|AAC39455.1| bHLH transcription factor JAF13 [Petunia x hybrida]
Length = 628
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 51 VTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
++E+RRR KINERF +L ++P + K D S L E IEY++ L+ +VQ E
Sbjct: 441 ISERRRREKINERFMLLASMLP-AGGKVDKISLLDETIEYLKELERRVQDLE 491
>gi|413919289|gb|AFW59221.1| plant color component at R1 [Zea mays]
Length = 610
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
H ++E++RR K+NE F +L+ ++P S + + AS L E I Y++ LQ +VQ+ E S
Sbjct: 417 HVMSERKRREKLNEMFLVLKSLLP-SIHRVNKASILAETIAYLKELQRRVQELESS 471
>gi|218202318|gb|EEC84745.1| hypothetical protein OsI_31742 [Oryza sativa Indica Group]
Length = 428
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L++++P + A L E+I YVQ LQ +V+
Sbjct: 259 HSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 309
>gi|226508342|ref|NP_001152551.1| DNA binding protein [Zea mays]
gi|195657419|gb|ACG48177.1| DNA binding protein [Zea mays]
Length = 454
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L++++P + A L E+I YVQ LQ +V+
Sbjct: 268 HSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 318
>gi|298205236|emb|CBI17295.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 23 EAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTAS 82
EA + + A+ G+ +D HS+ E+ RR KI+ER + L++++P ++ A
Sbjct: 255 EAPKDYIHVRARRGQATDS-------HSLAERVRREKISERMKFLQDLVPGCNKVTGKAV 307
Query: 83 FLLEVIEYVQYLQEKVQ 99
L E+I YVQ LQ +V+
Sbjct: 308 MLDEIINYVQSLQRQVE 324
>gi|222623520|gb|EEE57652.1| hypothetical protein OsJ_08085 [Oryza sativa Japonica Group]
Length = 300
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR +I+ER + L+E++P ++ A L E+I YVQ LQ++V+
Sbjct: 175 HSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVE 225
>gi|238498230|ref|XP_002380350.1| HLH transcription factor, putative [Aspergillus flavus NRRL3357]
gi|220693624|gb|EED49969.1| HLH transcription factor, putative [Aspergillus flavus NRRL3357]
Length = 380
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHS-DQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
++ HS+ E+RRRSK+NE F L+++IP Q + L I+YV YL++ + + +
Sbjct: 148 KTAHSLIERRRRSKMNEEFATLKDMIPACRGQDMHKLAILQASIDYVNYLEQCIHDLKTA 207
Query: 105 YQDWSAEPTKL 115
A P ++
Sbjct: 208 GDSHMAAPQRM 218
>gi|166428|gb|AAA32663.1| DEL [Antirrhinum majus]
Length = 644
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 42 ASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKY 101
A I H ++E++RR KINERF IL ++P S K D S L I+Y++ L+ KV +
Sbjct: 437 ADEIDRNHVLSERKRREKINERFMILASLVP-SGGKVDKVSILDHTIDYLRGLERKVDEL 495
Query: 102 E 102
E
Sbjct: 496 E 496
>gi|302807648|ref|XP_002985518.1| hypothetical protein SELMODRAFT_451590 [Selaginella moellendorffii]
gi|300146724|gb|EFJ13392.1| hypothetical protein SELMODRAFT_451590 [Selaginella moellendorffii]
Length = 551
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQ 106
SK+ V E++RR K+NER LR ++P K D AS L + IEYV+ LQ++V++ + +
Sbjct: 334 SKNLVAERKRRKKLNERLYSLRALVPKI-TKMDRASILGDAIEYVKELQQQVKELQDELE 392
Query: 107 D 107
D
Sbjct: 393 D 393
>gi|222635879|gb|EEE66011.1| hypothetical protein OsJ_21966 [Oryza sativa Japonica Group]
Length = 325
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KIN R ++L+E++P + TA L E+I +VQ LQ +V+
Sbjct: 157 HSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVE 207
>gi|226495509|ref|NP_001152044.1| LOC100285681 [Zea mays]
gi|195652123|gb|ACG45529.1| BHLH transcription factor [Zea mays]
gi|413932798|gb|AFW67349.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P+++ K D A+ L E+++YV++L+ +V+ +S
Sbjct: 135 HSIAERLRRERIAERMRALQELVPNTN-KTDRAAMLDEILDYVKFLRLQVKVLSMS 189
>gi|414589749|tpg|DAA40320.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 453
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L++++P + A L E+I YVQ LQ +V+
Sbjct: 267 HSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 317
>gi|358347900|ref|XP_003637988.1| Transcription factor BPE [Medicago truncatula]
gi|355503923|gb|AES85126.1| Transcription factor BPE [Medicago truncatula]
Length = 249
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER +IL++++P ++ A L E+I Y+Q LQ +V+
Sbjct: 162 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 212
>gi|356527316|ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 586
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 397 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 447
>gi|302820581|ref|XP_002991957.1| hypothetical protein SELMODRAFT_430203 [Selaginella moellendorffii]
gi|300140199|gb|EFJ06925.1| hypothetical protein SELMODRAFT_430203 [Selaginella moellendorffii]
Length = 551
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQ 106
SK+ V E++RR K+NER LR ++P K D AS L + IEYV+ LQ++V++ + +
Sbjct: 334 SKNLVAERKRRKKLNERLYSLRALVPKI-TKMDRASILGDAIEYVKELQQQVKELQDELE 392
Query: 107 D 107
D
Sbjct: 393 D 393
>gi|224120394|ref|XP_002331037.1| predicted protein [Populus trichocarpa]
gi|222872967|gb|EEF10098.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KIN+R ++L+E++P ++ TA L E+I +VQ LQ +V+
Sbjct: 188 HSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEIINHVQSLQCQVE 238
>gi|357509815|ref|XP_003625196.1| Transcription factor bHLH60 [Medicago truncatula]
gi|124360133|gb|ABN08149.1| Helix-loop-helix DNA-binding [Medicago truncatula]
gi|355500211|gb|AES81414.1| Transcription factor bHLH60 [Medicago truncatula]
Length = 340
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KIN R ++L+E++P ++ TA L E+I +VQ LQ +V+
Sbjct: 184 HSLAERARREKINARMKLLQELVPGCEKISGTALVLDEIINHVQTLQRQVE 234
>gi|115477012|ref|NP_001062102.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|42408258|dbj|BAD09414.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113624071|dbj|BAF24016.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|125561978|gb|EAZ07426.1| hypothetical protein OsI_29678 [Oryza sativa Indica Group]
gi|125603820|gb|EAZ43145.1| hypothetical protein OsJ_27735 [Oryza sativa Japonica Group]
Length = 365
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L++++P + A L E+I YVQ LQ +V+
Sbjct: 187 HSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSLQRQVE 237
>gi|357115005|ref|XP_003559284.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 243
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI ER +IL++++P ++ AS L E+I YVQ L+ +V+
Sbjct: 125 HSLAERARREKITERMKILQDLVPGCNKVIGKASVLDEIINYVQALERQVE 175
>gi|296278608|gb|ADH04268.1| MYC1b transcription factor [Nicotiana tabacum]
gi|316930967|gb|ADU60100.1| MYC2a transcription factor [Nicotiana tabacum]
Length = 679
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 1 MRTTKGNREEEDYEDDEFMSKKEA-ASNITNSNAKDGKNSDKASVIRSK---HSVTEQRR 56
M+++ G E+ D+ D E KEA +S + + K K + R + H E++R
Sbjct: 448 MKSSGGVGEDSDHSDLEASVVKEAESSRVVEPEKRPKKRGRKPANGREEPLNHVEAERQR 507
Query: 57 RSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
R K+N+RF LR ++P+ K D AS L + I Y+ L+ K+Q E
Sbjct: 508 REKLNQRFYALRAVVPNV-SKMDKASLLGDAISYINELKLKLQNTE 552
>gi|225431517|ref|XP_002275141.1| PREDICTED: transcription factor HEC3-like [Vitis vinifera]
Length = 199
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 14/80 (17%)
Query: 50 SVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE------- 102
SV + RR +I+E+ +IL+ ++P K DTAS L E I YV++L+ ++++ +
Sbjct: 100 SVAARHRRERISEKIRILQRLVP-GGTKMDTASMLDEAIRYVKFLKRQIRQLQSNHHPLP 158
Query: 103 ------VSYQDWSAEPTKLM 116
+S DW+ TKL+
Sbjct: 159 TDVTACLSTPDWAVTSTKLL 178
>gi|293332515|ref|NP_001169165.1| uncharacterized protein LOC100383015 [Zea mays]
gi|223975273|gb|ACN31824.1| unknown [Zea mays]
Length = 443
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L++++P + A L E+I YVQ LQ +V+
Sbjct: 257 HSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 307
>gi|219363183|ref|NP_001136483.1| uncharacterized protein LOC100216597 [Zea mays]
gi|194695886|gb|ACF82027.1| unknown [Zea mays]
gi|413920793|gb|AFW60725.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 469
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI ER ++L++++P + A L E+I YVQ LQ +V+
Sbjct: 267 HSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 317
>gi|116787019|gb|ABK24344.1| unknown [Picea sitchensis]
Length = 467
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KIN+R + L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 307 HSLAERVRREKINQRMKFLQDLVPTCNKVTGKAVMLDEIINYVQSLQHQVE 357
>gi|357516593|ref|XP_003628585.1| Transcription factor bHLH79 [Medicago truncatula]
gi|355522607|gb|AET03061.1| Transcription factor bHLH79 [Medicago truncatula]
Length = 278
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER +IL++++P ++ A L E+I Y+Q LQ +V+
Sbjct: 162 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 212
>gi|334184231|ref|NP_001189527.1| transcription factor bHLH84 [Arabidopsis thaliana]
gi|330251239|gb|AEC06333.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 341
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 12/95 (12%)
Query: 16 DEFMSKKEAA-SNITNSNAKD----GKNSDKASV------IRSKHSVTEQRRRSKINERF 64
D F+SK++ S N N K G +D S+ + H + Q+RR +INER
Sbjct: 217 DTFLSKEDGEDSKALNLNGKTRASRGAATDPQSLYARLKQLNKVHCMMVQKRRERINERL 276
Query: 65 QILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+IL+ ++P+ K D ++ L E ++YV++LQ +++
Sbjct: 277 RILQHLVPNG-TKVDISTMLEEAVQYVKFLQLQIK 310
>gi|222641764|gb|EEE69896.1| hypothetical protein OsJ_29731 [Oryza sativa Japonica Group]
Length = 809
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L++++P + A L E+I YVQ LQ +V+
Sbjct: 640 HSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 690
>gi|326518931|dbj|BAJ92626.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 463
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 39 SDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKV 98
S K S + H+ +E++RR +IN++ Q L++++P+S K D AS L EVI++++ LQ V
Sbjct: 257 STKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSS-KTDKASMLDEVIDHLKQLQATV 315
Query: 99 Q 99
Q
Sbjct: 316 Q 316
>gi|326502778|dbj|BAJ99017.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 464
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 39 SDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKV 98
S K S + H+ +E++RR +IN++ Q L++++P+S K D AS L EVI++++ LQ V
Sbjct: 257 STKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSS-KTDKASMLDEVIDHLKQLQATV 315
Query: 99 Q 99
Q
Sbjct: 316 Q 316
>gi|449437607|ref|XP_004136583.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
gi|449501894|ref|XP_004161487.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
Length = 369
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KIN R ++L+E++P ++ TA L E+I +VQ LQ +V+
Sbjct: 212 HSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVE 262
>gi|356558973|ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 548
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 350 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 400
>gi|224069890|ref|XP_002303073.1| predicted protein [Populus trichocarpa]
gi|222844799|gb|EEE82346.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 369 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 419
>gi|226496235|ref|NP_001140213.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194698524|gb|ACF83346.1| unknown [Zea mays]
gi|195636992|gb|ACG37964.1| BHLH transcription factor [Zea mays]
gi|414883773|tpg|DAA59787.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P+++ K D A+ L E+++YV++L+ +V+ +S
Sbjct: 127 HSIAERLRRERIAERMRALQELVPNTN-KTDRAAMLDEILDYVKFLRLQVKVLSMS 181
>gi|167999845|ref|XP_001752627.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696158|gb|EDQ82498.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 982
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQD 107
H E++RR K+N+RF LR ++P+ K D AS L + I ++ YLQEK+ E+ +D
Sbjct: 546 HVQAERQRREKLNKRFYALRAVVPNVS-KMDKASLLGDAIAHINYLQEKLHDAEMRIKD 603
>gi|302787675|ref|XP_002975607.1| hypothetical protein SELMODRAFT_16038 [Selaginella moellendorffii]
gi|300156608|gb|EFJ23236.1| hypothetical protein SELMODRAFT_16038 [Selaginella moellendorffii]
Length = 169
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
SK+ V+E++RR K+NER LR I+P K D AS + + I+YVQ LQ KVQ+ +
Sbjct: 6 SKNLVSERKRRKKLNERLYSLRAIVPKIS-KMDKASIVADAIDYVQELQGKVQELQ 60
>gi|242062782|ref|XP_002452680.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
gi|241932511|gb|EES05656.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
Length = 359
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR +I+ER + L+E++P + A L E+I YVQ LQ++V+
Sbjct: 164 HSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVE 214
>gi|172034194|gb|ACB69502.1| ICE87 [Triticum aestivum]
Length = 443
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 23 EAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTAS 82
E+ +N T + + + K + +K+ + E+RRR K+N+R LR ++P K D AS
Sbjct: 232 ESNANSTVTGGATAEGNAKKKGMPAKNLMAERRRRKKLNDRLYALRSVVPRI-SKMDRAS 290
Query: 83 FLLEVIEYVQYLQEKV 98
L + IEY++ L++K+
Sbjct: 291 ILGDAIEYLKELKQKI 306
>gi|326495502|dbj|BAJ85847.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 17/103 (16%)
Query: 14 EDDEFMSKKEAASNITNSNAKDGKNSDKASV----------IRSK-------HSVTEQRR 56
ED E S K A+ ++ N + D AS +R++ HS+ E+ R
Sbjct: 223 EDGEENSGKGKAAQSSSENGGKKQGKDGASKLPEPPKDFIHVRARRGEATDSHSLAERVR 282
Query: 57 RSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
R KI++R ++L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 283 REKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVE 325
>gi|413918387|gb|AFW58319.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 346
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 42 ASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKY 101
S+ H + E++RR KIN+RF L +IP +K D A+ L + YV+ LQEK++ +
Sbjct: 147 GSIYAQDHIIAERKRREKINQRFIELSTVIP-GLKKMDKATILSDATRYVRDLQEKIKAH 205
Query: 102 E 102
E
Sbjct: 206 E 206
>gi|15222679|ref|NP_173950.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|42571645|ref|NP_973913.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|75308803|sp|Q9C670.1|BH076_ARATH RecName: Full=Transcription factor bHLH76; AltName: Full=Basic
helix-loop-helix protein 76; Short=AtbHLH76; Short=bHLH
76; AltName: Full=Transcription factor EN 83; AltName:
Full=bHLH transcription factor bHLH076
gi|12321176|gb|AAG50678.1|AC079829_11 bHLH transcription factor GBOF-1, putative [Arabidopsis thaliana]
gi|26449804|dbj|BAC42025.1| putative transcription factor bHLH076 [Arabidopsis thaliana]
gi|28950949|gb|AAO63398.1| At1g26260 [Arabidopsis thaliana]
gi|332192546|gb|AEE30667.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|332192547|gb|AEE30668.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 390
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER + L++++P D+ A L E+I YVQ LQ +++
Sbjct: 234 HSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIE 284
>gi|326514032|dbj|BAJ92166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 316
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 149 HSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQSLQRQVE 199
>gi|255582765|ref|XP_002532159.1| DNA binding protein, putative [Ricinus communis]
gi|223528169|gb|EEF30233.1| DNA binding protein, putative [Ricinus communis]
Length = 190
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 23 EAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTAS 82
E + + A+ G+ +D HS+ E+ RR KINER + L++I+P + A
Sbjct: 65 EKPKEVVHVRARRGQATDS-------HSLAERVRRGKINERLRCLQDIVPGCYKTMGMAV 117
Query: 83 FLLEVIEYVQYLQEKVQ 99
L E+I YVQ LQ +V+
Sbjct: 118 MLDEIINYVQSLQNQVE 134
>gi|224145129|ref|XP_002325537.1| predicted protein [Populus trichocarpa]
gi|222862412|gb|EEE99918.1| predicted protein [Populus trichocarpa]
Length = 246
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 39/52 (75%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQK 100
S+ E+ RR++I++R + L+E++P+ D++ +TA L E + YV++LQ ++Q+
Sbjct: 181 RSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEALAYVKFLQRQIQE 232
>gi|168041399|ref|XP_001773179.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675538|gb|EDQ62032.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 550
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 47 SKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
SK+ V E++RR K+NER LR ++P K D AS L + IEYV+ LQ++V++ +
Sbjct: 315 SKNLVAERKRRKKLNERLYSLRALVPKI-TKMDRASILGDAIEYVKELQQQVKELQ 369
>gi|15219606|ref|NP_174776.1| transcription factor bHLH80 [Arabidopsis thaliana]
gi|75308885|sp|Q9C8P8.1|BH080_ARATH RecName: Full=Transcription factor bHLH80; AltName: Full=Basic
helix-loop-helix protein 80; Short=AtbHLH80; Short=bHLH
80; AltName: Full=Transcription factor EN 71; AltName:
Full=bHLH transcription factor bHLH080
gi|12324283|gb|AAG52112.1|AC023064_5 helix-loop-helix protein 1A, putative; 28707-26892 [Arabidopsis
thaliana]
gi|15724178|gb|AAL06481.1|AF411791_1 At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|20127088|gb|AAM10958.1|AF488612_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|20147401|gb|AAM10410.1| At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|332193674|gb|AEE31795.1| transcription factor bHLH80 [Arabidopsis thaliana]
Length = 259
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 39/51 (76%)
Query: 50 SVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQK 100
S+ E+ RR++I++R + L+E++P+ D++ +TA L E +EYV+ LQ ++Q+
Sbjct: 193 SIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQIQE 243
>gi|297851058|ref|XP_002893410.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297339252|gb|EFH69669.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 347
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER + L++++P D+ A L E+I YVQ LQ +++
Sbjct: 179 HSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIE 229
>gi|125564259|gb|EAZ09639.1| hypothetical protein OsI_31923 [Oryza sativa Indica Group]
Length = 366
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI++R ++L++++P ++ A L E+I YVQ LQ++V+
Sbjct: 185 HSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVE 235
>gi|115441817|ref|NP_001045188.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|56784941|dbj|BAD82399.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113534719|dbj|BAF07102.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|215704868|dbj|BAG94896.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189599|gb|EEC72026.1| hypothetical protein OsI_04910 [Oryza sativa Indica Group]
gi|323388943|gb|ADX60276.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 481
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI++R ++L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 288 HSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVE 338
>gi|356528396|ref|XP_003532789.1| PREDICTED: transcription factor GLABRA 3-like [Glycine max]
Length = 630
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H ++E+RRR+K+NERF LR ++P S K D S L + I+Y++ L+ +V++ E
Sbjct: 433 HVMSERRRRAKLNERFLTLRSMVP-SISKDDKVSILDDAIDYLKKLERRVKELE 485
>gi|326525931|dbj|BAJ93142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 17/103 (16%)
Query: 14 EDDEFMSKKEAASNITNSNAKDGKNSDKASV----------IRSK-------HSVTEQRR 56
ED E S K A+ ++ N + D AS +R++ HS+ E+ R
Sbjct: 223 EDGEENSGKGKAAQSSSENGGKKQGKDGASKLPEPPKDFIHVRARRGEATDSHSLAERVR 282
Query: 57 RSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
R KI++R ++L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 283 REKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVE 325
>gi|115479977|ref|NP_001063582.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|113631815|dbj|BAF25496.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|125606227|gb|EAZ45263.1| hypothetical protein OsJ_29905 [Oryza sativa Japonica Group]
gi|215765178|dbj|BAG86875.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI++R ++L++++P ++ A L E+I YVQ LQ++V+
Sbjct: 185 HSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVE 235
>gi|31043851|emb|CAD32238.1| BP-5 protein [Oryza sativa]
Length = 335
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 39/53 (73%), Gaps = 3/53 (5%)
Query: 49 HSVTEQRRRSKINERFQILR--EIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRR +INE+ + L+ E+IPH + K D AS L E IEY++ LQ +++
Sbjct: 171 HNLSERRRRDRINEKMRALQELELIPHCN-KTDKASMLDEAIEYLKSLQLQLR 222
>gi|359487888|ref|XP_002274833.2| PREDICTED: transcription factor UNE12-like [Vitis vinifera]
Length = 331
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P S K D A+ L E+++YV++L+ +V+ +S
Sbjct: 180 HSIAERLRRERIAERMKALQELVP-SANKTDRAAMLDEIVDYVKFLRLQVKVLSMS 234
>gi|356498105|ref|XP_003517894.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 264
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER +IL++I+P ++ A L E+I Y+Q LQ +V+
Sbjct: 148 HSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQRQVE 198
>gi|449463525|ref|XP_004149484.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L++++P + A L E+I YVQ LQ +V+
Sbjct: 352 HSLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 402
>gi|302759943|ref|XP_002963394.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
gi|300168662|gb|EFJ35265.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
Length = 459
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 50 SVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWS 109
+V + RR +I+ + +IL+ ++P K DTAS L E I YV+YL+ +VQ E+ Q
Sbjct: 295 TVAARHRRERISTKIRILQRLVP-GGTKMDTASMLDEAIHYVKYLKSQVQAMEMLEQSSG 353
Query: 110 AEP 112
+P
Sbjct: 354 DQP 356
>gi|255547017|ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
gi|223546170|gb|EEF47672.1| conserved hypothetical protein [Ricinus communis]
Length = 566
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER + L++++P + A L E+I YVQ LQ +V+
Sbjct: 382 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 432
>gi|118481624|gb|ABK92754.1| unknown [Populus trichocarpa]
Length = 215
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Query: 23 EAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTAS 82
+A+S I +S++ DG S AS +++V+E+ RR K+N++ LRE +P K D AS
Sbjct: 3 QASSQIYDSSSPDGAASASAS----RNTVSERNRRKKLNDKLYALREAVPRI-SKLDKAS 57
Query: 83 FLLEVIEYVQYLQEKVQKYEVSYQDWSAE 111
+ + I+Y+Q LQE+ + + + +E
Sbjct: 58 IIKDAIDYIQDLQEQETRLQAEIMELESE 86
>gi|194696204|gb|ACF82186.1| unknown [Zea mays]
gi|414883772|tpg|DAA59786.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 193
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P+++ K D A+ L E+++YV++L+ +V+ +S
Sbjct: 35 HSIAERLRRERIAERMRALQELVPNTN-KTDRAAMLDEILDYVKFLRLQVKVLSMS 89
>gi|527667|gb|AAA80176.1| myc-like regulatory R gene product, partial [Sorghum bicolor]
Length = 145
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 7/72 (9%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQ-- 106
H ++E++RR K+NE F IL+ ++P S QK S L E I Y++ LQ KVQ+ + S +
Sbjct: 3 HVMSERKRREKLNEMFLILKLLVP-SIQKVAKVSLLAETIAYLKELQRKVQELKSSRELL 61
Query: 107 ----DWSAEPTK 114
+ +A PTK
Sbjct: 62 SRPSETTARPTK 73
>gi|357141712|ref|XP_003572320.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 327
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L++++P + A L E+I YVQ LQ +V+
Sbjct: 159 HSIAEKLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 209
>gi|356527821|ref|XP_003532505.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 252
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 28 ITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEV 87
+ + AK G+ +D HS+ E+ RR KINE+ + L+ I+P + A L E+
Sbjct: 130 VVHVRAKRGQATDS-------HSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAIMLDEI 182
Query: 88 IEYVQYLQEKVQ 99
I YVQ LQ +V+
Sbjct: 183 INYVQSLQHQVE 194
>gi|356495525|ref|XP_003516627.1| PREDICTED: transcription factor bHLH25-like [Glycine max]
Length = 396
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 13 YEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIP 72
YED F+S + N TN +N +A +H + E++RR I++RF L I+P
Sbjct: 143 YEDKSFLS----SDNRTNQVGITTRNPIQAQ----EHIIAERKRRENISKRFIALSAILP 194
Query: 73 HSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+K D AS L + ++YV+ LQE+VQ E
Sbjct: 195 -GLKKMDKASVLGDAVKYVKQLQERVQTLE 223
>gi|115480081|ref|NP_001063634.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|113631867|dbj|BAF25548.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|125606291|gb|EAZ45327.1| hypothetical protein OsJ_29973 [Oryza sativa Japonica Group]
gi|215694666|dbj|BAG89857.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 282
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 21 KKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDT 80
++EA + A+ G+ +D HS+ E+ RR +I+ER ++L+ ++P D+
Sbjct: 97 EEEAPQGFIHVRARRGQATDS-------HSLAERVRRERISERMRMLQALVPGCDKVTGK 149
Query: 81 ASFLLEVIEYVQYLQEKVQ 99
A L E+I YVQ LQ +V+
Sbjct: 150 ALILDEIINYVQSLQNQVE 168
>gi|296088569|emb|CBI37560.3| unnamed protein product [Vitis vinifera]
Length = 136
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 14/80 (17%)
Query: 50 SVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE------- 102
SV + RR +I+E+ +IL+ ++P K DTAS L E I YV++L+ ++++ +
Sbjct: 37 SVAARHRRERISEKIRILQRLVP-GGTKMDTASMLDEAIRYVKFLKRQIRQLQSNHHPLP 95
Query: 103 ------VSYQDWSAEPTKLM 116
+S DW+ TKL+
Sbjct: 96 TDVTACLSTPDWAVTSTKLL 115
>gi|297738215|emb|CBI27416.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER + L++++P + A L E+I YVQ LQ +V+
Sbjct: 313 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 363
>gi|359473485|ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
[Vitis vinifera]
Length = 609
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER + L++++P + A L E+I YVQ LQ +V+
Sbjct: 418 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 468
>gi|330934414|ref|XP_003304538.1| hypothetical protein PTT_17167 [Pyrenophora teres f. teres 0-1]
gi|311318779|gb|EFQ87361.1| hypothetical protein PTT_17167 [Pyrenophora teres f. teres 0-1]
Length = 428
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHS-DQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
++ HS+ E+RRRSK+NE F +L+++IP Q+ + L IEY++YL++ + +
Sbjct: 155 KTAHSLIERRRRSKMNEEFGVLKDMIPACKGQEMHKLAILQASIEYMRYLEQCISDLRTA 214
Query: 105 Y 105
+
Sbjct: 215 H 215
>gi|255644916|gb|ACU22958.1| unknown [Glycine max]
Length = 242
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 50 SVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
SV + RR +I+ER +IL+ ++P K DTAS L E I YV++L+++VQ E
Sbjct: 142 SVAARHRRERISERIKILQRLVP-GGTKMDTASMLDEAIHYVKFLKKQVQTLE 193
>gi|168002647|ref|XP_001754025.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695001|gb|EDQ81347.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 576
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H E++RR K+N++F LR ++P+ K D AS L + I Y+ LQEK+QK E
Sbjct: 409 HVQAERQRREKLNQKFYALRSVVPNVS-KMDKASLLEDAITYINELQEKLQKAE 461
>gi|356513103|ref|XP_003525253.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 246
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 13/90 (14%)
Query: 28 ITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEV 87
+ + AK G+ +D HS+ E+ RR KINE+ + L+ I+P + A L E+
Sbjct: 124 VVHVRAKRGQATDS-------HSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAIMLDEI 176
Query: 88 IEYVQYLQEKVQKYEV------SYQDWSAE 111
I YVQ LQ +V+ + +Y D+++E
Sbjct: 177 INYVQSLQHQVEFLSMKLNAASTYYDFNSE 206
>gi|222635385|gb|EEE65517.1| hypothetical protein OsJ_20959 [Oryza sativa Japonica Group]
Length = 545
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 9/108 (8%)
Query: 1 MRTTKGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSK---------HSV 51
+ T ++ ED E E A+ + KD S K I + HS+
Sbjct: 322 LATVGSAQKNEDDEKGEPKRSSVASGKSSGKQIKDNAGSPKEDYIHVRARRGQATNSHSL 381
Query: 52 TEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
E+ RR KI+ER + L++++P + A L E+I YVQ LQ +V+
Sbjct: 382 AERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 429
>gi|356538777|ref|XP_003537877.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 420
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER + L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 222 HSLAERVRREKISERMKYLQDLVPGCNKVAGKAGMLDEIINYVQSLQRQVE 272
>gi|357520555|ref|XP_003630566.1| BHLH transcription factor [Medicago truncatula]
gi|355524588|gb|AET05042.1| BHLH transcription factor [Medicago truncatula]
Length = 327
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 7/78 (8%)
Query: 22 KEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTA 81
+E + + A+ G+ +D HS+ E+ RR KI+ER +IL++++P D+ A
Sbjct: 136 EEVPTGYIHVRARRGQATDS-------HSLAERVRREKISERMKILQQLVPGCDRVTGKA 188
Query: 82 SFLLEVIEYVQYLQEKVQ 99
L E+I YVQ LQ +V+
Sbjct: 189 LVLDEIINYVQSLQNQVE 206
>gi|242047606|ref|XP_002461549.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
gi|241924926|gb|EER98070.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
Length = 277
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P+++ K D A+ L E+++YV++L+ +V+ +S
Sbjct: 126 HSIAERLRRERIAERMRALQELVPNTN-KTDRAAMLDEILDYVKFLRLQVKVLSMS 180
>gi|224128880|ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
gi|222861217|gb|EEE98759.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
Length = 568
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER + L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 380 HSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 430
>gi|168029931|ref|XP_001767478.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681374|gb|EDQ67802.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1153
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQD 107
H TE++RR +NE++Q LR ++P+ K D AS + + IEYV+ L+ VQ+ ++ Q+
Sbjct: 562 HFATERQRREYLNEKYQTLRSLVPNPT-KADRASIVADAIEYVKELKRTVQELQLLVQE 619
>gi|225445889|ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
Length = 519
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 36/52 (69%), Gaps = 5/52 (9%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQK-----RDTASFLLEVIEYVQYLQ 95
HS+ E+ RR +I ER + L+E++P++++ D AS L E+I+YV++LQ
Sbjct: 296 HSIAERLRRERIAERMKALQELVPNANKVIHPTLTDKASMLDEIIDYVKFLQ 347
>gi|212721128|ref|NP_001132785.1| uncharacterized protein LOC100194274 [Zea mays]
gi|194695392|gb|ACF81780.1| unknown [Zea mays]
gi|414589942|tpg|DAA40513.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 305
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 6 GNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQ 65
G R E DE +E + A+ G+ +D HS+ E+ RR +I+ER +
Sbjct: 100 GKRGRSSKEVDE----EEEPKGYIHVRARRGQATDS-------HSLAERVRRERISERMR 148
Query: 66 ILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+L+ ++P D+ A L E+I YVQ LQ +V+
Sbjct: 149 VLQALVPGCDKVTGKALVLDEIINYVQSLQNQVE 182
>gi|449518045|ref|XP_004166054.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L++++P + A L E+I YVQ LQ +V+
Sbjct: 352 HSLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 402
>gi|398410467|ref|XP_003856584.1| hypothetical protein MYCGRDRAFT_107535 [Zymoseptoria tritici
IPO323]
gi|339476469|gb|EGP91560.1| hypothetical protein MYCGRDRAFT_107535 [Zymoseptoria tritici
IPO323]
Length = 451
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHS-DQKRDTASFLLEVIEYVQYLQEKV 98
++ HS+ E+RRRSK+NE F +L+++IP Q+ + L IEY++YL++ V
Sbjct: 179 KTAHSLIERRRRSKMNEEFGVLKDMIPACKGQEMHKLAILQASIEYLRYLEQCV 232
>gi|253761888|ref|XP_002489318.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
gi|241946966|gb|EES20111.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
Length = 324
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L++++P + A L E+I YVQ LQ +V+
Sbjct: 250 HSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 300
>gi|255587658|ref|XP_002534345.1| transcription factor, putative [Ricinus communis]
gi|223525454|gb|EEF28039.1| transcription factor, putative [Ricinus communis]
Length = 554
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 361 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 411
>gi|194694390|gb|ACF81279.1| unknown [Zea mays]
Length = 175
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 51 VTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSA 110
+ E++RR K+NE F +L+ ++P S K D AS L E I Y++ LQ +VQ+ E Q S
Sbjct: 1 MLERKRREKLNEMFLVLKSLVP-SIHKVDKASILAETIAYLKELQRRVQELESRRQGGSG 59
Query: 111 EPTK 114
+K
Sbjct: 60 CVSK 63
>gi|414869720|tpg|DAA48277.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 252
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 13/95 (13%)
Query: 5 KGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERF 64
+ N EE+ +DE A + A+ G+ +D HS+ E+ RR +I+ER
Sbjct: 119 EANTEEKSATEDE------ATRGYIHVRARRGQATDS-------HSLAERVRRERISERM 165
Query: 65 QILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
++L+ ++P D+ A L E+I YVQ LQ +V+
Sbjct: 166 RMLQALVPGCDKVTGKALILDEIINYVQSLQNQVE 200
>gi|5923912|gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulipa gesneriana]
Length = 321
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 21 KKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDT 80
++EA + A+ G+ +D HS+ E+ RR KI+ER ++L+ ++P D+
Sbjct: 125 EEEAPVGYIHVRARRGQATDS-------HSLAERVRREKISERMKLLQALVPGCDKVTGK 177
Query: 81 ASFLLEVIEYVQYLQEKVQ 99
A L E+I YVQ LQ +V+
Sbjct: 178 AVMLDEIINYVQSLQNQVE 196
>gi|357161474|ref|XP_003579101.1| PREDICTED: transcription factor bHLH25-like [Brachypodium
distachyon]
Length = 363
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H + E+RRR KIN+RF L +IP +K D A+ L + ++YV+ LQ+KV+ E
Sbjct: 172 HIIAERRRREKINQRFIELSTVIP-GLKKMDKATILGDAVKYVRELQDKVKTLE 224
>gi|13346182|gb|AAK19613.1|AF336280_1 GHDEL65 [Gossypium hirsutum]
Length = 620
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 33 AKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQ 92
+D +A I H ++E++RR KINER +L+ ++P ++ K D S L IEY+Q
Sbjct: 421 VRDAAWRPEADEICGNHVLSERKRREKINERLMMLKSLVP-ANNKADKVSILDVTIEYLQ 479
Query: 93 YLQEKVQKYE 102
L+ +V + E
Sbjct: 480 TLERRVAELE 489
>gi|79318615|ref|NP_001031093.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|45935021|gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana]
gi|46367460|emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana]
gi|332192548|gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 339
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER + L++++P D+ A L E+I YVQ LQ +++
Sbjct: 183 HSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIE 233
>gi|414589941|tpg|DAA40512.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 6 GNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQ 65
G R E DE +E + A+ G+ +D HS+ E+ RR +I+ER +
Sbjct: 90 GKRGRSSKEVDE----EEEPKGYIHVRARRGQATDS-------HSLAERVRRERISERMR 138
Query: 66 ILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+L+ ++P D+ A L E+I YVQ LQ +V+
Sbjct: 139 VLQALVPGCDKVTGKALVLDEIINYVQSLQNQVE 172
>gi|356571031|ref|XP_003553685.1| PREDICTED: uncharacterized protein LOC100784724 [Glycine max]
Length = 518
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Query: 6 GNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQ 65
G R+ ED +D ++S + ++G N K S H+++E++RR KIN++ +
Sbjct: 299 GFRKHEDTDDSTYLSDNDGEPEDMVKQDREG-NRVKRSRNPEVHNLSEKKRREKINKKMR 357
Query: 66 ILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
L+++IP+ + K D AS L + I+Y++ L+ ++Q
Sbjct: 358 TLKDLIPNCN-KVDKASMLDDAIDYLKTLKLQLQ 390
>gi|297846606|ref|XP_002891184.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337026|gb|EFH67443.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 256
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 39/51 (76%)
Query: 50 SVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQK 100
S+ E+ RR++I++R + L+E++P+ D++ +TA L E +EYV+ LQ ++Q+
Sbjct: 190 SIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQGQIQE 240
>gi|414865636|tpg|DAA44193.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 275
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KINER ++L++++P ++ A L E+I YVQ LQ +++
Sbjct: 139 HSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIE 189
>gi|356566230|ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 585
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 396 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 446
>gi|110741191|dbj|BAF02146.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 366
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L+E+ P ++ A L E+I YVQ LQ++V+
Sbjct: 217 HSLAERVRREKISERMRLLQELAPGCNKITGKAVMLDEIINYVQSLQQQVE 267
>gi|22331295|ref|NP_189011.2| transcription factor bHLH77 [Arabidopsis thaliana]
gi|75311240|sp|Q9LK48.1|BH077_ARATH RecName: Full=Transcription factor bHLH77; AltName: Full=Basic
helix-loop-helix protein 77; Short=AtbHLH77; Short=bHLH
77; AltName: Full=Transcription factor EN 87; AltName:
Full=bHLH transcription factor bHLH077
gi|9293943|dbj|BAB01846.1| unnamed protein product [Arabidopsis thaliana]
gi|17529310|gb|AAL38882.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|20465453|gb|AAM20186.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|332643281|gb|AEE76802.1| transcription factor bHLH77 [Arabidopsis thaliana]
Length = 371
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 23 EAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTAS 82
EA + + A+ G+ +D HS+ E+ RR KI+ER +L++++P ++ A
Sbjct: 183 EAPKDYIHVRARRGQATDS-------HSLAERARREKISERMTLLQDLVPGCNRITGKAV 235
Query: 83 FLLEVIEYVQYLQEKVQ 99
L E+I YVQ LQ +V+
Sbjct: 236 MLDEIINYVQSLQRQVE 252
>gi|302767186|ref|XP_002967013.1| hypothetical protein SELMODRAFT_87033 [Selaginella moellendorffii]
gi|300165004|gb|EFJ31612.1| hypothetical protein SELMODRAFT_87033 [Selaginella moellendorffii]
Length = 393
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 45 IRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ + H++ E+RRR K+N+RF +LR ++P K D S L + IEY++ LQ++V E
Sbjct: 223 VNTAHAMLERRRREKLNDRFLMLRNMVPFVT-KMDKVSILGDAIEYLRQLQKQVADLE 279
>gi|223702428|gb|ACN21645.1| putative basic helix-loop-helix protein BHLH8 [Lotus japonicus]
Length = 309
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER +L++++P D+ A L E+I YVQ LQ +V+
Sbjct: 130 HSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQHQVE 180
>gi|115455925|ref|NP_001051563.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|31126765|gb|AAP44685.1| unknown protein [Oryza sativa Japonica Group]
gi|108711561|gb|ABF99356.1| Lipoamide dehydrogenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113550034|dbj|BAF13477.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|215737529|dbj|BAG96659.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193907|gb|EEC76334.1| hypothetical protein OsI_13903 [Oryza sativa Indica Group]
Length = 294
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P+++ K D A+ L E+++YV++L+ +V+ +S
Sbjct: 144 HSIAERLRRERIAERMRALQELVPNTN-KTDRAAMLDEILDYVKFLRLQVKVLSMS 198
>gi|4519199|dbj|BAA75513.1| MYC-RP [Perilla frutescens]
Length = 620
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 35 DGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYL 94
D + +A + H ++E++RR KI+ERF IL ++P S K D S L IEY++ L
Sbjct: 409 DDHSGQEADEVDRNHVLSERKRREKISERFSILVSLVP-SGGKVDKVSILDHTIEYLREL 467
Query: 95 QEKVQKYEVSYQD 107
+ KV+ E SY++
Sbjct: 468 ERKVKDLE-SYKE 479
>gi|449533331|ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 456
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER + L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 260 HSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 310
>gi|357152259|ref|XP_003576061.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 211
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 43 HSLAERVRREKISERMKLLQDLVPSCNKVTGKAVMLDEIINYVQSLQRQVE 93
>gi|4519201|dbj|BAA75514.1| MYC-GP [Perilla frutescens]
Length = 620
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 35 DGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYL 94
D + +A + H ++E++RR KI+ERF IL ++P S K D S L IEY++ L
Sbjct: 409 DDHSGQEADEVDRNHVLSERKRREKISERFSILVSLVP-SGGKVDKVSILDHTIEYLREL 467
Query: 95 QEKVQKYEVSYQD 107
+ KV+ E SY++
Sbjct: 468 ERKVKDLE-SYKE 479
>gi|18423944|ref|NP_568850.1| transcription factor bHLH35 [Arabidopsis thaliana]
gi|332009470|gb|AED96853.1| transcription factor bHLH35 [Arabidopsis thaliana]
Length = 247
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 11 EDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREI 70
ED+E D + +EA S +S++ DG S AS K+ V+E+ RR K+N+R LR +
Sbjct: 22 EDFEYDSW-PLEEAISGSYDSSSPDGAASSPAS----KNIVSERNRRQKLNQRLFALRSV 76
Query: 71 IPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEP 112
+P+ K D AS + + I Y++ LQ + +K E ++ + P
Sbjct: 77 VPNI-TKMDKASIIKDAISYIEGLQYEEKKLEAEIRELESTP 117
>gi|356516503|ref|XP_003526933.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 320
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L+ ++P D+ A L E+I YVQ LQ +V+
Sbjct: 175 HSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVE 225
>gi|357126478|ref|XP_003564914.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 475
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI++R ++L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 281 HSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVE 331
>gi|242033101|ref|XP_002463945.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
gi|241917799|gb|EER90943.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
Length = 315
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 8/77 (10%)
Query: 30 NSNAKDGKNSDKASVIRSK-------HSVTEQRRRSKINERFQILREIIPHSDQKRDTAS 82
+S+ DG D V R+K HS+ E+ RR KI+ER ++L++++P ++ A
Sbjct: 124 DSSDGDGTKEDYVHV-RAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAV 182
Query: 83 FLLEVIEYVQYLQEKVQ 99
L E+I YVQ LQ +V+
Sbjct: 183 MLDEIINYVQSLQRQVE 199
>gi|20453066|gb|AAM19778.1| At2g46510/F13A10.4 [Arabidopsis thaliana]
Length = 566
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H E++RR K+N+RF LR ++P+ K D AS L + I Y++ LQEKV+ E
Sbjct: 396 HVEVERQRREKLNQRFYALRSVVPNI-SKMDKASLLGDAISYIKELQEKVKIME 448
>gi|225424835|ref|XP_002272776.1| PREDICTED: transcription factor BPE-like [Vitis vinifera]
Length = 277
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER +IL++++P ++ A L E+I Y+Q LQ +V+
Sbjct: 162 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 212
>gi|125863280|gb|ABN58427.1| inducer of CBF expression 1 [Populus trichocarpa]
Length = 558
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 10/96 (10%)
Query: 12 DYEDDEF--------MSKKEAASNITNSNAKDGKN-SDKASVIRSKHSVTEQRRRSKINE 62
+Y+ DEF + K S+ NS G + K + +K+ + E+RRR K+N+
Sbjct: 326 NYDSDEFTENTKVEEIGKNGGISSKANSGVTGGVDQKGKKKGLPAKNLMAERRRRKKLND 385
Query: 63 RFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKV 98
R +LR ++P K D AS L + IEY++ L +++
Sbjct: 386 RLYMLRSVVPKI-SKMDRASILGDAIEYLKELLQRI 420
>gi|222625964|gb|EEE60096.1| hypothetical protein OsJ_12958 [Oryza sativa Japonica Group]
Length = 294
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P+++ K D A+ L E+++YV++L+ +V+ +S
Sbjct: 144 HSIAERLRRERIAERMRALQELVPNTN-KTDRAAMLDEILDYVKFLRLQVKVLSMS 198
>gi|125536776|gb|EAY83264.1| hypothetical protein OsI_38473 [Oryza sativa Indica Group]
Length = 198
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 20/107 (18%)
Query: 12 DYEDDEFMSKKEAASNITNSNAKDGKNS---DKASVIRSKHSVTE--------------- 53
DY+DD F+S +E D +N +++ +R+K SV++
Sbjct: 63 DYQDDSFVSAEETTIGNKRKVQMDTENELMMNRSKEVRTKMSVSKACKHSVSAESSQPYY 122
Query: 54 -QRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+ RR +INER +IL+E+IP+ K D ++ L E I+YV++L +++
Sbjct: 123 AKNRRQRINERLRILQELIPNG-TKVDISTMLEEAIQYVKFLHLQIK 168
>gi|116830915|gb|ABK28414.1| unknown [Arabidopsis thaliana]
Length = 224
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 25/136 (18%)
Query: 5 KGNREEEDYEDDEFMSKKEAASN---------ITNSNAKDGKNSDKASVIRSKHSVTEQR 55
KGN+EE + S++E A N + + AK G+ +D HS+ E+
Sbjct: 69 KGNKEESGSKRRRKRSEEEEAMNGDETQKPKDVVHVRAKRGQATDS-------HSLAERV 121
Query: 56 RRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSA----- 110
RR KINER + L++++P + A L +I+YV+ LQ +++ + SA
Sbjct: 122 RREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFLSMKLSAASACYDLN 181
Query: 111 ----EPTKLMPWRNSH 122
EPT + N H
Sbjct: 182 SLDIEPTDIFQGGNIH 197
>gi|297835410|ref|XP_002885587.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331427|gb|EFH61846.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 374
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 23 EAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTAS 82
EA + + A+ G+ +D HS+ E+ RR KI+ER +L++++P ++ A
Sbjct: 186 EAPKDYIHVRARRGQATDS-------HSLAERARREKISERMTLLQDLVPGCNRITGKAV 238
Query: 83 FLLEVIEYVQYLQEKVQ 99
L E+I YVQ LQ +V+
Sbjct: 239 MLDEIINYVQSLQRQVE 255
>gi|226492880|ref|NP_001152266.1| BHLH transcription factor [Zea mays]
gi|195654447|gb|ACG46691.1| BHLH transcription factor [Zea mays]
Length = 428
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L++++P + A L E+I YVQ LQ +V+
Sbjct: 269 HSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQVE 319
>gi|449440736|ref|XP_004138140.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
gi|449477343|ref|XP_004154996.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
Length = 276
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER +IL++++P ++ A L E+I Y+Q LQ +V+
Sbjct: 158 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
>gi|224131266|ref|XP_002328496.1| predicted protein [Populus trichocarpa]
gi|222838211|gb|EEE76576.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P + K D A+ L E+++YV++L+ +V+ +S
Sbjct: 31 HSIAERLRRVRITERVKALQELVPTCN-KTDRAAMLDEIVDYVKFLRLQVKVLSMS 85
>gi|297792043|ref|XP_002863906.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
gi|297309741|gb|EFH40165.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
Length = 498
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI ER ++L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 310 HSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 360
>gi|298204851|emb|CBI34158.3| unnamed protein product [Vitis vinifera]
Length = 261
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P S K D A+ L E+++YV++L+ +V+ +S
Sbjct: 110 HSIAERLRRERIAERMKALQELVP-SANKTDRAAMLDEIVDYVKFLRLQVKVLSMS 164
>gi|226500746|ref|NP_001149110.1| LOC100282732 [Zea mays]
gi|195624818|gb|ACG34239.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 287
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 19/114 (16%)
Query: 5 KGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASV------------IRSK---- 48
K R+ ++ F S + SN S+ + G D++S +R++
Sbjct: 59 KACRKHKEDSGASFSSARSKDSNSKESSKRSGGKRDRSSKKVDEEEPKGYIHVRARRGQA 118
Query: 49 ---HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR +I+ER ++L+ ++P D+ A L E+I YVQ LQ +V+
Sbjct: 119 TDNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQVE 172
>gi|255646074|gb|ACU23524.1| unknown [Glycine max]
Length = 402
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER + L+++IP ++ A L E+I YVQ LQ +V+
Sbjct: 203 HSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINYVQSLQRQVE 253
>gi|102139897|gb|ABF70046.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 278
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
HS+ E+ RR +I+ER + L+E++P + AS L E+I YVQ LQ +V+ +S +
Sbjct: 143 HSLAERVRRERISERMKYLQELVPGCSKIMGKASTLDEIINYVQSLQRQVEF--LSMKLA 200
Query: 109 SAEP 112
+AEP
Sbjct: 201 AAEP 204
>gi|449469332|ref|XP_004152375.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
gi|449530384|ref|XP_004172175.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 341
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 15 DDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHS 74
+D+ +E IT+S+ +GK S+ ++RR +INER +IL+ ++P+
Sbjct: 224 EDDCNEAQENNGGITSSSTSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNG 283
Query: 75 DQKRDTASFLLEVIEYVQYLQEKVQ 99
K D ++ L E ++YV++LQ +++
Sbjct: 284 -TKVDISTMLEEAVQYVKFLQLQIK 307
>gi|18395643|ref|NP_564229.1| transcription factor bHLH75 [Arabidopsis thaliana]
gi|218563498|sp|A4D998.1|BH075_ARATH RecName: Full=Transcription factor bHLH75; AltName: Full=Basic
helix-loop-helix protein 75; Short=AtbHLH75; Short=bHLH
75; AltName: Full=Transcription factor EN 78; AltName:
Full=bHLH transcription factor bHLH075
gi|21618141|gb|AAM67191.1| helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
gi|51969656|dbj|BAD43520.1| putative bHLH transcription factor (bHLH075) [Arabidopsis thaliana]
gi|91805851|gb|ABE65654.1| basic helix-loop-helix family protein [Arabidopsis thaliana]
gi|332192486|gb|AEE30607.1| transcription factor bHLH75 [Arabidopsis thaliana]
Length = 223
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 25/136 (18%)
Query: 5 KGNREEEDYEDDEFMSKKEAASN---------ITNSNAKDGKNSDKASVIRSKHSVTEQR 55
KGN+EE + S++E A N + + AK G+ +D HS+ E+
Sbjct: 69 KGNKEESGSKRRRKRSEEEEAMNGDETQKPKDVVHVRAKRGQATDS-------HSLAERV 121
Query: 56 RRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSA----- 110
RR KINER + L++++P + A L +I+YV+ LQ +++ + SA
Sbjct: 122 RREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFLSMKLSAASACYDLN 181
Query: 111 ----EPTKLMPWRNSH 122
EPT + N H
Sbjct: 182 SLDIEPTDIFQGGNIH 197
>gi|413933172|gb|AFW67723.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 284
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 30 NSNAKDGKNSDKASVIRSK-------HSVTEQRRRSKINERFQILREIIPHSDQKRDTAS 82
+S+ DG D IR+K HS+ E+ RR KI+ER ++L++++P + A
Sbjct: 92 DSSDGDGTKEDYVH-IRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAV 150
Query: 83 FLLEVIEYVQYLQEKVQ 99
L E+I YVQ LQ +V+
Sbjct: 151 MLDEIINYVQSLQRQVE 167
>gi|18407096|ref|NP_566078.1| transcription factor ABA-INDUCIBLE bHLH-TYPE [Arabidopsis thaliana]
gi|75315651|sp|Q9ZPY8.2|AIB_ARATH RecName: Full=Transcription factor ABA-INDUCIBLE bHLH-TYPE;
Short=AtAIB; AltName: Full=Basic helix-loop-helix
protein 17; Short=AtbHLH17; Short=bHLH 17; AltName:
Full=Transcription factor EN 35; AltName: Full=bHLH
transcription factor bHLH017
gi|20197775|gb|AAD20162.2| putative bHLH transcription factor [Arabidopsis thaliana]
gi|20197823|gb|AAM15265.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|330255618|gb|AEC10712.1| transcription factor ABA-INDUCIBLE bHLH-TYPE [Arabidopsis thaliana]
Length = 566
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H E++RR K+N+RF LR ++P+ K D AS L + I Y++ LQEKV+ E
Sbjct: 396 HVEAERQRREKLNQRFYALRSVVPNI-SKMDKASLLGDAISYIKELQEKVKIME 448
>gi|147774847|emb|CAN69076.1| hypothetical protein VITISV_004761 [Vitis vinifera]
Length = 302
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER +IL++++P ++ A L E+I Y+Q LQ +V+
Sbjct: 162 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 212
>gi|414591363|tpg|DAA41934.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 448
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L++++P + A L E+I YVQ LQ +V+
Sbjct: 289 HSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQVE 339
>gi|413920794|gb|AFW60726.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 328
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR KI ER ++L++++P + A L E+I YVQ LQ +V+ V
Sbjct: 267 HSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEVRRVC 322
>gi|238009798|gb|ACR35934.1| unknown [Zea mays]
Length = 287
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 19/114 (16%)
Query: 5 KGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASV------------IRSK---- 48
K R+ ++ F S + SN S+ + G D++S +R++
Sbjct: 59 KACRKHKEDSGASFSSARSKDSNSKESSKRSGGKRDRSSKKVDEEEPKGYIHVRARRGQA 118
Query: 49 ---HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR +I+ER ++L+ ++P D+ A L E+I YVQ LQ +V+
Sbjct: 119 TDNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQVE 172
>gi|255550670|ref|XP_002516384.1| transcription factor, putative [Ricinus communis]
gi|223544482|gb|EEF46001.1| transcription factor, putative [Ricinus communis]
Length = 534
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER + L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 357 HSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 407
>gi|218197962|gb|EEC80389.1| hypothetical protein OsI_22515 [Oryza sativa Indica Group]
Length = 494
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 9/108 (8%)
Query: 1 MRTTKGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSK---------HSV 51
+ T ++ ED E E A+ + KD S K I + HS+
Sbjct: 271 LATVGSAQKNEDDEKGEPKRSSVASGKSSGKQIKDNAGSPKEDYIHVRARRGQATNSHSL 330
Query: 52 TEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
E+ RR KI+ER + L++++P + A L E+I YVQ LQ +V+
Sbjct: 331 AERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 378
>gi|20127064|gb|AAM10951.1|AF488595_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 450
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 263 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 313
>gi|413954172|gb|AFW86821.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 362
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 21 KKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKR-D 79
K++ S ++++ ++DG +V ++ H E+ RR ++NE +LR ++P KR D
Sbjct: 80 KRQKCSPVSSAASEDG------AVNKTSHITVERNRRKQMNEHIAVLRSLMPCFYVKRGD 133
Query: 80 TASFLLEVIEYVQYLQEKVQKYEVSYQ 106
AS + V++Y++ LQ+ +Q E Q
Sbjct: 134 QASIIGGVVDYIKELQQVLQSLEAKKQ 160
>gi|356517054|ref|XP_003527205.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 384
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 22 KEAASNITNSNAKDGKNSDKASVIRSK----HSVTEQRRRSKINERFQILREIIPHSDQK 77
KE + +NS A + + R + HS+ E+ RR KI+ER + L++++P ++
Sbjct: 165 KETCAETSNSKASEKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKV 224
Query: 78 RDTASFLLEVIEYVQYLQEKVQ 99
A L E+I YVQ LQ +V+
Sbjct: 225 TGKAGMLDEIINYVQSLQRQVE 246
>gi|242038587|ref|XP_002466688.1| hypothetical protein SORBIDRAFT_01g012280 [Sorghum bicolor]
gi|241920542|gb|EER93686.1| hypothetical protein SORBIDRAFT_01g012280 [Sorghum bicolor]
Length = 318
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H + E++RR KIN+RF L +IP +K D A+ LL+ Y++ LQEK++ E
Sbjct: 150 HIIAERKRREKINQRFIELSTVIP-GLKKMDKATILLDATRYLKELQEKLKDLE 202
>gi|449527227|ref|XP_004170614.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 450
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 7/77 (9%)
Query: 23 EAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTAS 82
EA + + A+ G+ +D HS+ E+ RR KI+ER ++L++++P ++ A
Sbjct: 246 EAPKDYIHVRARRGQATDS-------HSLAERVRREKISERMKLLQDLVPGCNKVTGKAL 298
Query: 83 FLLEVIEYVQYLQEKVQ 99
L E+I YVQ LQ +V+
Sbjct: 299 MLDEIINYVQSLQHQVE 315
>gi|356507384|ref|XP_003522447.1| PREDICTED: transcription factor bHLH137-like [Glycine max]
Length = 334
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L+ ++P D+ A L E+I YVQ LQ +V+
Sbjct: 158 HSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVE 208
>gi|356502674|ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 551
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER + L++++P + A L E+I YVQ LQ +V+
Sbjct: 369 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 419
>gi|297828381|ref|XP_002882073.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297327912|gb|EFH58332.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 563
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H E++RR K+N+RF LR ++P+ K D AS L + I Y++ LQEKV+ E
Sbjct: 396 HVEAERQRREKLNQRFYALRSVVPNI-SKMDKASLLGDAISYIKELQEKVKIME 448
>gi|356540613|ref|XP_003538782.1| PREDICTED: transcription factor bHLH25-like [Glycine max]
Length = 349
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 11/90 (12%)
Query: 13 YEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIP 72
Y D F+S IT+ N + +H + E++RR K+++RF L I+P
Sbjct: 154 YVDKTFLSSDTNQVGITSRNPIQAQ----------EHVIAERKRREKLSQRFIALSAILP 203
Query: 73 HSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+K D AS L + I+YV+ LQE+VQ E
Sbjct: 204 -GLKKMDKASVLGDAIKYVKQLQERVQTLE 232
>gi|351720977|ref|NP_001237962.1| uncharacterized protein LOC100306638 [Glycine max]
gi|255629145|gb|ACU14917.1| unknown [Glycine max]
Length = 240
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 12/99 (12%)
Query: 13 YEDDEFMSKKEAASNITNSNAKDGKNSDKASV-----IRSK-------HSVTEQRRRSKI 60
+E+D F ++ EA+S N +++ +A +R++ HS+ E+ RR KI
Sbjct: 77 FENDGFKAEAEASSVGGNKSSEQSNKPCEAPKPDYIHVRARRGQATDSHSLAERARREKI 136
Query: 61 NERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+ER +IL+++ P ++ A L E+I Y+Q LQ +V+
Sbjct: 137 SERMKILQDLAPGCNKVIGKALVLDEIINYIQSLQRQVE 175
>gi|224142693|ref|XP_002324689.1| predicted protein [Populus trichocarpa]
gi|222866123|gb|EEF03254.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 23 EAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTAS 82
+A+S I +S++ DG S AS +++V+E+ RR K+N++ LRE +P K D AS
Sbjct: 7 QASSQIYDSSSPDGAASASAS----RNTVSERNRRKKLNDKLYALREAVPRI-SKLDKAS 61
Query: 83 FLLEVIEYVQYLQEK 97
+ + I+Y+Q LQE+
Sbjct: 62 IIKDAIDYIQDLQEQ 76
>gi|51971323|dbj|BAD44326.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51971523|dbj|BAD44426.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
Length = 456
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 269 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 319
>gi|297734057|emb|CBI15304.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER +IL++++P ++ A L E+I Y+Q LQ +V+
Sbjct: 153 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 203
>gi|225456604|ref|XP_002267633.1| PREDICTED: transcription factor bHLH79 isoform 1 [Vitis vinifera]
Length = 284
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER +IL++++P ++ A L E+I Y+Q LQ +V+
Sbjct: 168 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 218
>gi|357117085|ref|XP_003560305.1| PREDICTED: transcription factor bHLH74-like isoform 2 [Brachypodium
distachyon]
Length = 317
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 30 NSNAKDGKNSDKASVIRSK-------HSVTEQRRRSKINERFQILREIIPHSDQKRDTAS 82
+S+ DG D IR+K HS+ E+ RR KI+ER ++L++++P + A
Sbjct: 126 DSSDGDGTKEDYVH-IRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAV 184
Query: 83 FLLEVIEYVQYLQEKVQ 99
L E+I YVQ LQ +V+
Sbjct: 185 MLDEIINYVQSLQRQVE 201
>gi|357117083|ref|XP_003560304.1| PREDICTED: transcription factor bHLH74-like isoform 1 [Brachypodium
distachyon]
Length = 326
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 30 NSNAKDGKNSDKASVIRSK-------HSVTEQRRRSKINERFQILREIIPHSDQKRDTAS 82
+S+ DG D IR+K HS+ E+ RR KI+ER ++L++++P + A
Sbjct: 132 DSSDGDGTKEDYVH-IRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAV 190
Query: 83 FLLEVIEYVQYLQEKVQ 99
L E+I YVQ LQ +V+
Sbjct: 191 MLDEIINYVQSLQRQVE 207
>gi|15231450|ref|NP_187390.1| transcription factor bHLH62 [Arabidopsis thaliana]
gi|75313804|sp|Q9SRT2.1|BH062_ARATH RecName: Full=Transcription factor bHLH62; AltName: Full=Basic
helix-loop-helix protein 62; Short=AtbHLH62; Short=bHLH
62; AltName: Full=Transcription factor EN 85; AltName:
Full=bHLH transcription factor bHLH062
gi|6041855|gb|AAF02164.1|AC009853_24 unknown protein [Arabidopsis thaliana]
gi|51968880|dbj|BAD43132.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51969134|dbj|BAD43259.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|111074462|gb|ABH04604.1| At3g07340 [Arabidopsis thaliana]
gi|332641009|gb|AEE74530.1| transcription factor bHLH62 [Arabidopsis thaliana]
Length = 456
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 269 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 319
>gi|222625527|gb|EEE59659.1| hypothetical protein OsJ_12056 [Oryza sativa Japonica Group]
Length = 320
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 48 KHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQD 107
+H + E++RR KIN+RF L +IP +K D A+ L + + YV+ +QEK+ + E +Q+
Sbjct: 127 EHIIAERKRREKINQRFIELSTVIP-GLKKMDKATILSDAVRYVKEMQEKLSELE-QHQN 184
Query: 108 WSAEPTKLM 116
E L+
Sbjct: 185 GGVESAILL 193
>gi|115467562|ref|NP_001057380.1| Os06g0275600 [Oryza sativa Japonica Group]
gi|55295989|dbj|BAD68029.1| putative TA1 protein [Oryza sativa Japonica Group]
gi|113595420|dbj|BAF19294.1| Os06g0275600 [Oryza sativa Japonica Group]
Length = 437
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 9/108 (8%)
Query: 1 MRTTKGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSK---------HSV 51
+ T ++ ED E E A+ + KD S K I + HS+
Sbjct: 214 LATVGSAQKNEDDEKGEPKRSSVASGKSSGKQIKDNAGSPKEDYIHVRARRGQATNSHSL 273
Query: 52 TEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
E+ RR KI+ER + L++++P + A L E+I YVQ LQ +V+
Sbjct: 274 AERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 321
>gi|356545203|ref|XP_003541034.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 402
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER + L+++IP ++ A L E+I YVQ LQ +V+
Sbjct: 203 HSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINYVQSLQRQVE 253
>gi|302755142|ref|XP_002960995.1| hypothetical protein SELMODRAFT_73360 [Selaginella moellendorffii]
gi|300171934|gb|EFJ38534.1| hypothetical protein SELMODRAFT_73360 [Selaginella moellendorffii]
Length = 393
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 45 IRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+ + H++ E+RRR K+N+RF +LR ++P K D S L + IEY++ LQ +V E
Sbjct: 223 VNTAHAMLERRRREKLNDRFLMLRNMVPFVT-KMDKVSILGDAIEYLRQLQRQVADLE 279
>gi|356503048|ref|XP_003520324.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 582
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 383 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 433
>gi|212723614|ref|NP_001131789.1| uncharacterized protein LOC100193160 [Zea mays]
gi|194692538|gb|ACF80353.1| unknown [Zea mays]
gi|414872589|tpg|DAA51146.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 30 NSNAKDGKNSDKASVIRSK-------HSVTEQRRRSKINERFQILREIIPHSDQKRDTAS 82
+S+ DG D IR+K HS+ E+ RR KI+ER ++L++++P + A
Sbjct: 124 DSSDGDGTKEDYVH-IRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAV 182
Query: 83 FLLEVIEYVQYLQEKVQ 99
L E+I YVQ LQ +V+
Sbjct: 183 MLDEIINYVQSLQRQVE 199
>gi|317142251|ref|XP_001818912.2| hypothetical protein AOR_1_672164 [Aspergillus oryzae RIB40]
Length = 317
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIPHS-DQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
++ HS+ E+RRRSK+NE F L+++IP Q + L I+YV YL++ + + +
Sbjct: 159 KTAHSLIERRRRSKMNEEFATLKDMIPACRGQDMHKLAILQASIDYVNYLEQCIHDLKTA 218
Query: 105 YQDWSAEPTKL 115
A P ++
Sbjct: 219 GDSHMAAPQRM 229
>gi|225458639|ref|XP_002282817.1| PREDICTED: transcription factor HEC1 [Vitis vinifera]
gi|302142304|emb|CBI19507.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 50 SVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
SV + RR +I+E+ +IL+ ++P K DTAS L E I YV++L+ +VQ E
Sbjct: 157 SVAARHRRERISEKIRILQRLVP-GGTKMDTASMLDEAIHYVKFLKTQVQSLE 208
>gi|148906813|gb|ABR16552.1| unknown [Picea sitchensis]
Length = 605
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER + L++++P + A L E+I YVQ LQ +V+
Sbjct: 415 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 465
>gi|449461645|ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 523
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER + L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 260 HSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 310
>gi|6166283|gb|AAF04760.1|AF103808_1 helix-loop-helix protein 1A [Pinus taeda]
Length = 551
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 50 SVTEQRRRSKINERFQILREIIPHSD-QKRDTASFLLEVIEYVQYLQEKVQK 100
S+ E+ RR++I+ER + L+E++P+SD Q + A L E +EYV+ LQ++VQ+
Sbjct: 480 SIAERVRRTRISERMRKLQELVPNSDKQTVNIADMLDEAVEYVKSLQKQVQE 531
>gi|340914647|gb|EGS17988.1| delta-1-pyrroline-5-carboxylate dehydrogenase-like protein
[Chaetomium thermophilum var. thermophilum DSM 1495]
Length = 1051
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 19/89 (21%)
Query: 46 RSKHSVTEQRRRSKINERFQILREIIP--HSDQKRDT---ASFLLEV------------I 88
++ HS+ E+RRRSK+NE F +L+ +IP D + FLL I
Sbjct: 787 KTAHSIIERRRRSKMNEEFAVLKSLIPACKGDMHKLAILQVGFLLRCPCWVYTDIFQAAI 846
Query: 89 EYVQYLQEKVQKYEVSYQDWSAEPTKLMP 117
EYV+YL++ V K + Q SAE T +P
Sbjct: 847 EYVRYLEDCVAKLKA--QVSSAESTGSLP 873
>gi|46367684|emb|CAE00874.1| TA1 protein [Oryza sativa Japonica Group]
Length = 204
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI++R ++L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 85 HSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVE 135
>gi|15239013|ref|NP_199667.1| transcription factor bHLH78 [Arabidopsis thaliana]
gi|75309142|sp|Q9FJL4.1|BH078_ARATH RecName: Full=Transcription factor bHLH78; AltName: Full=Basic
helix-loop-helix protein 78; Short=AtbHLH78; Short=bHLH
78; AltName: Full=Transcription factor EN 86; AltName:
Full=bHLH transcription factor bHLH078
gi|10177346|dbj|BAB10689.1| unnamed protein product [Arabidopsis thaliana]
gi|27754625|gb|AAO22758.1| unknown protein [Arabidopsis thaliana]
gi|28973465|gb|AAO64057.1| unknown protein [Arabidopsis thaliana]
gi|332008305|gb|AED95688.1| transcription factor bHLH78 [Arabidopsis thaliana]
Length = 498
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI ER ++L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 312 HSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 362
>gi|302785816|ref|XP_002974679.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
gi|300157574|gb|EFJ24199.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
Length = 520
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 50 SVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWS 109
+V + RR +I+ + +IL+ ++P K DTAS L E I YV+YL+ +VQ E+ Q
Sbjct: 296 TVAARHRRERISTKIRILQRLVP-GGTKMDTASMLDEAIHYVKYLKSQVQAMEMLEQSSG 354
Query: 110 AEP 112
+P
Sbjct: 355 DQP 357
>gi|297833524|ref|XP_002884644.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330484|gb|EFH60903.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 456
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 269 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 319
>gi|148906568|gb|ABR16436.1| unknown [Picea sitchensis]
Length = 590
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H E++RR K+N+RF LR ++P+ K D AS L + I Y+Q LQ KV+ E
Sbjct: 428 HVEAERQRREKLNQRFYALRAVVPNIS-KMDKASLLGDAISYIQELQNKVKDME 480
>gi|168032827|ref|XP_001768919.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679831|gb|EDQ66273.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 532
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 6 GNREEEDYEDDEFMSKKEAASNI------TNS-NAKDGKNSDKASVI-RSKHSVTEQRRR 57
G +E + E E +S + S + TN K K S K V R H +E+ RR
Sbjct: 216 GRKESQRLEKGESVSAPTSPSELRLVKEKTNQLGVKKSKGSGKRPVSQRENHIWSERERR 275
Query: 58 SKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+N F LR ++PH K D ++ + E+I+Y+Q LQ K++
Sbjct: 276 KGMNCLFTRLRNLLPHPTSKTDKSTVIGEIIKYIQSLQVKLE 317
>gi|414872588|tpg|DAA51145.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea
mays]
Length = 209
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 30 NSNAKDGKNSDKASVIRSK-------HSVTEQRRRSKINERFQILREIIPHSDQKRDTAS 82
+S+ DG D IR+K HS+ E+ RR KI+ER ++L++++P + A
Sbjct: 17 DSSDGDGTKEDYVH-IRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAV 75
Query: 83 FLLEVIEYVQYLQEKVQ 99
L E+I YVQ LQ +V+
Sbjct: 76 MLDEIINYVQSLQRQVE 92
>gi|356526880|ref|XP_003532044.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 273
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER +IL++++P ++ A L E+I Y+Q LQ +V+
Sbjct: 157 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 207
>gi|255543699|ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
gi|223547923|gb|EEF49415.1| conserved hypothetical protein [Ricinus communis]
Length = 444
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER + L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 245 HSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 295
>gi|172053609|gb|ACB70963.1| ICE1 [Brassica rapa subsp. chinensis]
Length = 497
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 12 DYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREII 71
+YE DE +A+ ++ N K + +K+ + E+RRR K+N+R +LR ++
Sbjct: 279 NYESDELNESGKASESVQNG-----GGKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVV 333
Query: 72 PHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHW 123
P K D AS L + I+ YL+E +Q+ + + + PT +P +S +
Sbjct: 334 PKIS-KMDRASILGDAID---YLKELLQRINDLHNELESTPTGSLPPTSSSF 381
>gi|356500459|ref|XP_003519049.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 378
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 37/50 (74%)
Query: 50 SVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
S+ E+ RR++I+ER + L+E++PH D++ +TA L +EY++ LQ++ +
Sbjct: 306 SIAERVRRTRISERMRKLQELVPHMDKQTNTADMLDLAVEYIKDLQKQFK 355
>gi|33339703|gb|AAQ14331.1|AF283506_1 MYC1 [Catharanthus roseus]
Length = 271
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER +IL++++P ++ A L E+I Y+Q LQ +V+
Sbjct: 155 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 205
>gi|357167346|ref|XP_003581118.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 407
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 21 KKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDT 80
K E + + A+ G+ +D HS+ E+ RR +I+ER ++L+ ++P ++
Sbjct: 237 KPEPVKDYIHVRARRGQATDS-------HSLAERVRRKRISERMKLLQSLVPGCNKITGK 289
Query: 81 ASFLLEVIEYVQYLQEKVQ 99
A L E+I YVQ LQ +V+
Sbjct: 290 ALMLDEIINYVQSLQRQVE 308
>gi|224134144|ref|XP_002321747.1| predicted protein [Populus trichocarpa]
gi|222868743|gb|EEF05874.1| predicted protein [Populus trichocarpa]
Length = 454
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 10/96 (10%)
Query: 12 DYEDDEF--------MSKKEAASNITNSNAKDGKN-SDKASVIRSKHSVTEQRRRSKINE 62
+Y+ DEF + K S+ NS G + K + +K+ + E+RRR K+N+
Sbjct: 222 NYDSDEFTENTKVEEIGKNGGISSKANSGVTGGVDQKGKKKGLPAKNLMAERRRRKKLND 281
Query: 63 RFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKV 98
R +LR ++P K D AS L + IEY++ L +++
Sbjct: 282 RLYMLRSVVPKI-SKMDRASILGDAIEYLKELLQRI 316
>gi|168056355|ref|XP_001780186.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668419|gb|EDQ55027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 144
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 38/52 (73%)
Query: 50 SVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKY 101
S+ E+ RR KI+ER + L++++P D++ +TA L + +EYV+ LQ++VQ+
Sbjct: 75 SIAERVRRGKISERMKKLQDLVPSMDRQTNTADMLDDAVEYVKQLQQQVQEL 126
>gi|77999289|gb|ABB16991.1| unknown [Solanum tuberosum]
Length = 304
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I+ER + L+E++P S K D A+ L E+++YV++L+ +V+ +S
Sbjct: 153 HSIAERLRRERISERIKALQELVP-SCNKTDRAAMLDEILDYVKFLRLQVKVLSMS 207
>gi|357506069|ref|XP_003623323.1| LAX [Medicago truncatula]
gi|355498338|gb|AES79541.1| LAX [Medicago truncatula]
Length = 153
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 50 SVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE--VSYQD 107
SV + RR +I++RF+IL+ +IP K DT S L E I YV++L++++ +E +++ D
Sbjct: 38 SVAARERRHRISDRFKILQSMIP-GGSKLDTVSMLEEAIHYVKFLKKQIWLHETLINFVD 96
Query: 108 WSAEPTKLMP 117
E L+P
Sbjct: 97 DIGESHMLLP 106
>gi|302030865|gb|ADK91821.1| inducer of CBF expression 2 protein [Populus suaveolens]
Length = 546
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 68/150 (45%), Gaps = 26/150 (17%)
Query: 12 DYEDDEFMSKKEAASNITNSNAKDGKNSDKASV---------------IRSKHSVTEQRR 56
+Y+ DEF + K+G NS KA+ + +K+ + E+RR
Sbjct: 313 NYDSDEFTENTKVEET-----GKNGGNSSKANSGVTGGGVDQKGKKRGLPAKNLMAERRR 367
Query: 57 RSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEP--TK 114
R K+N+R +LR ++P K D AS L + IE YL+E +Q+ + + + P +
Sbjct: 368 RKKLNDRLYMLRSVVPKI-SKMDRASILGDAIE---YLKELLQRINDLHNELESTPPSSS 423
Query: 115 LMPWRNSHWRVQNFATQPHAIKNGSGPGSM 144
L P + H + P I + PGS+
Sbjct: 424 LTPTTSFHPLTPTPSALPSRIMDKLCPGSL 453
>gi|225437758|ref|XP_002273729.1| PREDICTED: uncharacterized protein LOC100253874 [Vitis vinifera]
Length = 569
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS++E+RRR +IN++ + L+E+IP+ +K D S L E I+Y++ LQ +VQ
Sbjct: 388 HSLSEKRRRDRINKKMRSLQELIPNC-KKVDKISILDEAIDYLKTLQLQVQ 437
>gi|223702406|gb|ACN21634.1| putative basic helix-loop-helix protein BHLH10 [Lotus japonicus]
Length = 338
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
S+ +RRR KINER +IL+ ++P+ K D ++ L E ++YV++LQ +++
Sbjct: 257 QSIYARRRREKINERLKILQNLVPNG-TKVDISTMLEEAVQYVKFLQLQIK 306
>gi|118486023|gb|ABK94855.1| unknown [Populus trichocarpa]
Length = 348
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER + L++++P + A L E+I YVQ LQ +V+
Sbjct: 161 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 211
>gi|115435532|ref|NP_001042524.1| Os01g0235700 [Oryza sativa Japonica Group]
gi|113532055|dbj|BAF04438.1| Os01g0235700 [Oryza sativa Japonica Group]
gi|215694296|dbj|BAG89289.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768046|dbj|BAH00275.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 617
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV 103
H E++RR K+N+RF LR ++P+ K D AS L + I Y+ LQ+K+++ EV
Sbjct: 464 HVEAERQRREKLNQRFYALRAVVPNIS-KMDKASLLGDAITYITDLQKKLKEMEV 517
>gi|413968544|gb|AFW90609.1| basic helix-loop-helix protein BHLH3 [Solanum tuberosum]
Length = 303
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I+ER + L+E++P S K D A+ L E+++YV++L+ +V+ +S
Sbjct: 152 HSIAERLRRERISERIKALQELVP-SCNKTDRAAMLDEILDYVKFLRLQVKVLSMS 206
>gi|388498252|gb|AFK37192.1| unknown [Lotus japonicus]
Length = 220
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER +IL++++P ++ A L E+I Y+Q LQ +V+
Sbjct: 102 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVE 152
>gi|254575636|gb|ACT68317.1| ICE-like protein [Eutrema salsugineum]
gi|296881976|gb|ADH82413.1| inducer of CBF expression 1 [Eutrema halophilum]
Length = 500
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 12 DYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREII 71
+YE DE +AA ++ N K + +K+ + E+RRR K+N+R +LR ++
Sbjct: 280 NYESDELNESGKAAESVQNGGGG---CKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVV 336
Query: 72 PHSDQKRDTASFLLEVIEYVQYLQEKV 98
P K D AS L + I+Y++ L +++
Sbjct: 337 PKIS-KMDRASILGDAIDYLKELLQRI 362
>gi|224072488|ref|XP_002303756.1| predicted protein [Populus trichocarpa]
gi|222841188|gb|EEE78735.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ R ++L+ ++P D+ A L E+I YVQ+L+++VQ
Sbjct: 172 HSLAERVRREKISSRMKLLQSLVPGCDKITGKALVLDEIISYVQFLKDRVQ 222
>gi|56783853|dbj|BAD81265.1| bHLH protein -like [Oryza sativa Japonica Group]
gi|125569662|gb|EAZ11177.1| hypothetical protein OsJ_01027 [Oryza sativa Japonica Group]
Length = 613
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV 103
H E++RR K+N+RF LR ++P+ K D AS L + I Y+ LQ+K+++ EV
Sbjct: 460 HVEAERQRREKLNQRFYALRAVVPNIS-KMDKASLLGDAITYITDLQKKLKEMEV 513
>gi|125547213|gb|EAY93035.1| hypothetical protein OsI_14836 [Oryza sativa Indica Group]
Length = 613
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV 103
H E++RR K+N+RF LR ++P+ K D AS L + I Y+ LQ+K+++ EV
Sbjct: 460 HVEAERQRREKLNQRFYALRAVVPNIS-KMDKASLLGDAITYITDLQKKLKEMEV 513
>gi|449454802|ref|XP_004145143.1| PREDICTED: transcription factor ICE1-like [Cucumis sativus]
gi|449473864|ref|XP_004154005.1| PREDICTED: transcription factor ICE1-like [Cucumis sativus]
Length = 550
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 61/125 (48%), Gaps = 7/125 (5%)
Query: 3 TTKGNREEEDYEDDEFMSKKEAASNI-----TNSNAKDGKNSDKASVIRSKHSVTEQRRR 57
T++ N + +D+ ++ E+ N+ NS G K + +K+ + E+RRR
Sbjct: 313 TSRFNYDSDDFTENTNTKLDESGRNVGNTSNANSTVTGGDQKGKKKGLPAKNLMAERRRR 372
Query: 58 SKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMP 117
K+N+R +LR ++P K D AS L + IEY++ L +++ + +S L P
Sbjct: 373 KKLNDRLYMLRSVVPKI-SKMDRASILGDAIEYLKELLQRINDLHNELE-FSPSGAALTP 430
Query: 118 WRNSH 122
+ H
Sbjct: 431 GASFH 435
>gi|242049812|ref|XP_002462650.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
gi|241926027|gb|EER99171.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
Length = 281
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 12/94 (12%)
Query: 6 GNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQ 65
G R+ E DE E + A+ G+ +D HS+ E+ RR +I+ER +
Sbjct: 89 GKRDRSSKEVDE-----EEPKGYIHVRARRGQATDS-------HSLAERVRRERISERMR 136
Query: 66 ILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+L+ ++P D+ A L E+I YVQ LQ +V+
Sbjct: 137 VLQALVPGCDKVTGKALILDEIINYVQSLQNQVE 170
>gi|77556450|gb|ABA99246.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|218187186|gb|EEC69613.1| hypothetical protein OsI_38987 [Oryza sativa Indica Group]
gi|222617411|gb|EEE53543.1| hypothetical protein OsJ_36752 [Oryza sativa Japonica Group]
Length = 265
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H +TE+RRRS+INE+F++L+ ++P D K +S L I Y++ LQ+++Q
Sbjct: 157 HGLTEKRRRSRINEKFKMLQRLVPGCD-KCSQSSTLDRTIHYMKSLQQQLQ 206
>gi|381415424|gb|AFG29442.1| inducer of CBF expression 1 protein [Isatis tinctoria]
Length = 499
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 12 DYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREII 71
+YE DE +AA ++ N K + +K+ + E+RRR K+N+R +LR ++
Sbjct: 282 NYESDELNEGGKAAESVQNGGGG----KGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVV 337
Query: 72 PHSDQKRDTASFLLEVIEYVQYLQEKV 98
P K D AS L + I+Y++ L +++
Sbjct: 338 PKIS-KMDRASILGDAIDYLKELLQRI 363
>gi|332083019|gb|AEE00745.1| inducer of CBF expression [Brassica juncea]
Length = 438
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 12 DYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREII 71
+YE DE +AA ++ N K + +K+ + E+RRR K+N+R +LR ++
Sbjct: 220 NYESDELNESGKAAESVQNGGGG----RGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVV 275
Query: 72 PHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHW 123
P K D AS L + I+ YL+E +Q+ + + + P +P +S +
Sbjct: 276 PKIS-KMDRASILGDAID---YLKELLQRINDLHNELESTPNGSLPLASSSF 323
>gi|115454541|ref|NP_001050871.1| Os03g0671800 [Oryza sativa Japonica Group]
gi|108710331|gb|ABF98126.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549342|dbj|BAF12785.1| Os03g0671800 [Oryza sativa Japonica Group]
gi|215741494|dbj|BAG97989.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388939|gb|ADX60274.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 385
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 48 KHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQD 107
+H + E++RR KIN+RF L +IP +K D A+ L + + YV+ +QEK+ + E +Q+
Sbjct: 192 EHIIAERKRREKINQRFIELSTVIP-GLKKMDKATILSDAVRYVKEMQEKLSELE-QHQN 249
Query: 108 WSAEPTKLM 116
E L+
Sbjct: 250 GGVESAILL 258
>gi|224105381|ref|XP_002313791.1| predicted protein [Populus trichocarpa]
gi|222850199|gb|EEE87746.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER + L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 248 HSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 298
>gi|290767965|gb|ADD60674.1| putative TA1 protein [Oryza granulata]
Length = 430
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 12/108 (11%)
Query: 1 MRTTKGNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSK---------HSV 51
M + N +E YE A + AKD S K I + HS+
Sbjct: 210 MAAAQKNENDEKYEPKR---SSVAPGKSSRKQAKDNAGSPKEEYIHVRARRGQATNSHSL 266
Query: 52 TEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
E+ RR KI+ER + L++++P + A L E+I YVQ LQ +V+
Sbjct: 267 AERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 314
>gi|255558300|ref|XP_002520177.1| DNA binding protein, putative [Ricinus communis]
gi|223540669|gb|EEF42232.1| DNA binding protein, putative [Ricinus communis]
Length = 265
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER +IL++++P ++ A L E+I Y+Q LQ +V+
Sbjct: 149 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 199
>gi|62466473|gb|AAX83562.1| LAX [Oryza barthii]
gi|62466475|gb|AAX83563.1| LAX [Oryza meridionalis]
gi|62466477|gb|AAX83564.1| LAX [Oryza longistaminata]
gi|62466479|gb|AAX83565.1| LAX [Oryza glumipatula]
gi|62466481|gb|AAX83566.1| LAX [Oryza nivara]
gi|62466483|gb|AAX83567.1| LAX [Oryza rufipogon]
gi|62466485|gb|AAX83568.1| LAX [Oryza sativa Japonica Group]
gi|62466487|gb|AAX83569.1| LAX [Oryza sativa Japonica Group]
gi|62466489|gb|AAX83570.1| LAX [Oryza sativa Japonica Group]
gi|62466493|gb|AAX83572.1| LAX [Oryza sativa Japonica Group]
gi|62466495|gb|AAX83573.1| LAX [Oryza sativa Indica Group]
gi|62466497|gb|AAX83574.1| LAX [Oryza sativa Indica Group]
gi|62466501|gb|AAX83576.1| LAX [Oryza sativa Indica Group]
gi|62466511|gb|AAX83581.1| LAX [Oryza sativa Indica Group]
gi|62466517|gb|AAX83584.1| LAX [Oryza rufipogon]
Length = 189
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 50 SVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
SV + RR +I++RF++LR ++P K DT S L + I YV++L+ +V ++ +
Sbjct: 30 SVAARERRHRISDRFRVLRSLVP-GGSKMDTVSMLEQAIHYVKFLKAQVTLHQAA 83
>gi|30687365|ref|NP_189056.2| transcription factor FAMA [Arabidopsis thaliana]
gi|75283553|sp|Q56YJ8.1|FAMA_ARATH RecName: Full=Transcription factor FAMA; AltName: Full=Basic
helix-loop-helix protein 97; Short=AtbHLH97; Short=bHLH
97; AltName: Full=Transcription factor EN 14; AltName:
Full=bHLH transcription factor bHLH097
gi|62319997|dbj|BAD94119.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|114213507|gb|ABI54336.1| At3g24140 [Arabidopsis thaliana]
gi|332643341|gb|AEE76862.1| transcription factor FAMA [Arabidopsis thaliana]
Length = 414
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 9 EEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILR 68
EEED E+ ++KKE S A+ K S++ R H E+ RR ++NE ++LR
Sbjct: 162 EEEDRENKN-VTKKEVKSK--RKRARTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLR 218
Query: 69 EIIPHSD-QKRDTASFLLEVIEYVQYLQEKVQKYE 102
++P S Q+ D AS + IE+V+ L++ +Q E
Sbjct: 219 SLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLE 253
>gi|20127085|gb|AAM10957.1|AF488610_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 498
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI ER ++L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 312 HSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 362
>gi|356495611|ref|XP_003516668.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 414
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER + L++++P + A L E+I YVQ LQ +V+
Sbjct: 232 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 282
>gi|255540845|ref|XP_002511487.1| DNA binding protein, putative [Ricinus communis]
gi|223550602|gb|EEF52089.1| DNA binding protein, putative [Ricinus communis]
Length = 275
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER +IL++++P ++ A L E+I Y+Q LQ +V+
Sbjct: 157 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 207
>gi|449523427|ref|XP_004168725.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor ICE1-like
[Cucumis sativus]
Length = 550
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 6/101 (5%)
Query: 3 TTKGNREEEDYEDDEFMSKKEAASNI-----TNSNAKDGKNSDKASVIRSKHSVTEQRRR 57
T++ N + +D+ ++ E+ N+ NS G K + +K+ + E+RRR
Sbjct: 313 TSRFNYDSDDFTENTNTKLDESGRNVGNTSNANSTVTGGDQKGKKKGLPAKNLMAERRRR 372
Query: 58 SKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKV 98
K+N+R +LR ++P K D AS L + IEY++ L +++
Sbjct: 373 KKLNDRLYMLRSVVPKI-SKMDRASILGDAIEYLKELLQRI 412
>gi|356576702|ref|XP_003556469.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 331
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P S K D A+ L E+++YV++L+ +V+ +S
Sbjct: 180 HSIAERLRRERIAERMKALQELVP-SINKTDRAAMLDEIVDYVKFLRLQVKVLSMS 234
>gi|297744077|emb|CBI37047.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS++E+RRR +IN++ + L+E+IP+ +K D S L E I+Y++ LQ +VQ
Sbjct: 19 HSLSEKRRRDRINKKMRSLQELIPNC-KKVDKISILDEAIDYLKTLQLQVQ 68
>gi|449454949|ref|XP_004145216.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 340
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER + L+ ++P D+ A L E+I YVQ LQ +V+
Sbjct: 159 HSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVE 209
>gi|339716188|gb|AEJ88333.1| putative MYC protein [Tamarix hispida]
Length = 160
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 40/51 (78%)
Query: 50 SVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQK 100
S+ E+ RR++I++R + L+E++P+ D++ +TA L E +EYV+ LQ+++++
Sbjct: 96 SIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKGLQKQIEE 146
>gi|225456461|ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
gi|297734492|emb|CBI15739.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Query: 22 KEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTA 81
+E + + A+ G+ +D HS+ E+ RR KI+ER ++L+ ++P D+ A
Sbjct: 162 EEPPTGYIHVRARRGQATDS-------HSLAERVRREKISERMKLLQALVPGCDKVTGKA 214
Query: 82 SFLLEVIEYVQYLQEKVQ 99
L E+I YVQ LQ +V+
Sbjct: 215 LMLDEIINYVQSLQNQVE 232
>gi|29788848|gb|AAP03394.1| putative ammonium transporter [Oryza sativa Japonica Group]
Length = 353
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 48 KHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
+H + E++RR KIN+RF L +IP +K D A+ L + + YV+ +QEK+ + E
Sbjct: 192 EHIIAERKRREKINQRFIELSTVIP-GLKKMDKATILSDAVRYVKEMQEKLSELE 245
>gi|225428454|ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
Length = 456
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER + L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 267 HSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 317
>gi|225445937|ref|XP_002263999.1| PREDICTED: transcription factor bHLH35 [Vitis vinifera]
gi|297735470|emb|CBI17910.3| unnamed protein product [Vitis vinifera]
Length = 244
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 14 EDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPH 73
E D + EA S +S++ DG S AS K+ V+E+ RR K+NER LR ++P+
Sbjct: 21 EFDSWGGLDEAFSGYYDSSSPDGAASSAAS----KNIVSERNRRKKLNERLFALRAVVPN 76
Query: 74 SDQKRDTASFLLEVIEYVQYLQEK 97
K D AS + + I+Y+Q L E+
Sbjct: 77 I-SKMDKASIIKDAIDYIQDLHEQ 99
>gi|145239741|ref|XP_001392517.1| possible bhlh transcription factor [Aspergillus niger CBS 513.88]
gi|134077029|emb|CAK39903.1| unnamed protein product [Aspergillus niger]
gi|350629644|gb|EHA18017.1| hypothetical protein ASPNIDRAFT_208174 [Aspergillus niger ATCC
1015]
Length = 387
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 22 KEAASNITNSNAKDGKNSDKASVIR-----SKHSVTEQRRRSKINERFQILREIIPHS-D 75
K A+N ++N+K + S ++ R + HS+ E+RRRSK+NE F L+++IP
Sbjct: 127 KTPANNGASANSKKKQPSATSAAGRKIARKTAHSLIERRRRSKMNEEFGTLKDMIPACKG 186
Query: 76 QKRDTASFLLEVIEYVQYLQEKV 98
Q + L I+YV YL++ +
Sbjct: 187 QDMHKLAILQASIDYVNYLEQCI 209
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.309 0.125 0.348
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,067,882,323
Number of Sequences: 23463169
Number of extensions: 209308315
Number of successful extensions: 562398
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 2760
Number of HSP's that attempted gapping in prelim test: 559692
Number of HSP's gapped (non-prelim): 4289
length of query: 333
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 190
effective length of database: 9,003,962,200
effective search space: 1710752818000
effective search space used: 1710752818000
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 77 (34.3 bits)