BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019960
(333 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9CAA4|BIM2_ARATH Transcription factor BIM2 OS=Arabidopsis thaliana GN=BIM2 PE=1 SV=1
Length = 311
Score = 355 bits (911), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 181/302 (59%), Positives = 223/302 (73%), Gaps = 19/302 (6%)
Query: 1 MRTTKGNREEEDYEDDEFMSKKEA-ASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSK 59
MRT KGN+EEEDY +++F SK+E +SN T + +D K +DKAS IRSKHSVTEQRRRSK
Sbjct: 1 MRTGKGNQEEEDYGEEDFNSKREGPSSNTTVHSNRDSKENDKASAIRSKHSVTEQRRRSK 60
Query: 60 INERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWR 119
INERFQILRE+IP+S+QKRDTASFLLEVI+YVQYLQEKVQKYE SY WS EPTKL PWR
Sbjct: 61 INERFQILRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQKYEGSYPGWSQEPTKLTPWR 120
Query: 120 NSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESDPNRDIACK 179
N+HWRVQ+ P AI NGSGPG FPGKF+DN+++ +P ++ Q P+ESD R I
Sbjct: 121 NNHWRVQSLGNHPVAINNGSGPGIPFPGKFEDNTVTSTPAIIAEPQIPIESDKARAITGI 180
Query: 180 PMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPATTDTMNQQE 239
++ QPE+ +KG+ PLQ LP V Q+NECPAT+D + Q
Sbjct: 181 SIESQPELDDKGLP---PLQPILPM---------------VQGEQANECPATSDGLGQSN 222
Query: 240 ELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRANRGLMPEASVA 299
+L +EGGTI+ISS YS LL++LTQAL++AGIDLSQA +SVQIDLGKRAN+GL E +
Sbjct: 223 DLVIEGGTISISSAYSHELLSSLTQALQNAGIDLSQAKLSVQIDLGKRANQGLTHEEPSS 282
Query: 300 KD 301
K+
Sbjct: 283 KN 284
>sp|Q9FMB6|BIM3_ARATH Transcription factor BIM3 OS=Arabidopsis thaliana GN=BIM3 PE=1 SV=1
Length = 298
Score = 164 bits (415), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 155/291 (53%), Gaps = 28/291 (9%)
Query: 45 IRSKHSVTEQRRRSKINERFQILREIIPHS--DQKRDTASFLLEVIEYVQYLQEKVQKYE 102
RSKHS TEQRRRSKINERFQ L +IIP + DQKRD ASFLLEVIEY+ +LQEKV YE
Sbjct: 34 CRSKHSETEQRRRSKINERFQSLMDIIPQNQNDQKRDKASFLLEVIEYIHFLQEKVHMYE 93
Query: 103 VSYQDWSAEPTKLMPWRNSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLT 162
S+Q W PTKL+PWRNSH V P +K+ S ++ ++ S L
Sbjct: 94 DSHQMWYQSPTKLIPWRNSHGSVAEENDHPQIVKSFSS----------NDKVAASSGFLL 143
Query: 163 STQTPVESDPNRDIACKPMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSD 222
T V D + ++ K + P A + P S + H +P +
Sbjct: 144 DTYNSVNPDIDSAVSTKIPEHSPVSAVSSYLRTEP----------SLQFVQHDFWQPKTS 193
Query: 223 AQSNECPATTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQI 282
+ C T + + E+ + ++S++ SQ +LN LT+AL+S+G+++S+ ISVQ+
Sbjct: 194 CGTINC-FTNELLTSDEKTSA-----SLSTVCSQRVLNTLTEALKSSGVNMSETMISVQL 247
Query: 283 DLGKRANRGLMPEASVAKDLENPPSINQAMAKLRDVSSGEDSDHSQKRLRK 333
L KR +R A ++D N + + + S D DHSQKR+R+
Sbjct: 248 SLRKREDREYSVAAFASEDNGNSIADEEGDSPTETRSFCNDIDHSQKRIRR 298
>sp|Q9LEZ3|BIM1_ARATH Transcription factor BIM1 OS=Arabidopsis thaliana GN=BIM1 PE=1 SV=2
Length = 529
Score = 159 bits (401), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 171/299 (57%), Gaps = 37/299 (12%)
Query: 1 MRTTKGNREEEDYEDDE-FMSKKEAASNI--------TNSNAKDGKNSDKASVIRSKHSV 51
+R+ KG+ +E+D +D+E F+ KKE++S ++ + N K + RSKHS
Sbjct: 224 IRSAKGSSQEDDLDDEEDFIMKKESSSTSQSHRVDLRVKADVRGSPNDQKLNTPRSKHSA 283
Query: 52 TEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAE 111
TEQRRRSKIN+RFQ+LR++IP+SDQKRD ASFLLEVIEY+Q+LQEK KY SYQ W+ E
Sbjct: 284 TEQRRRSKINDRFQMLRQLIPNSDQKRDKASFLLEVIEYIQFLQEKADKYVTSYQGWNHE 343
Query: 112 PTKLMPWRNSHWRVQNFATQPHAIKNGSGPGSMFPGKFDDNSISMSPTMLTSTQTPVESD 171
P KL+ W++++ N P G F K ++ ++ ++L + Q V
Sbjct: 344 PAKLLNWQSNN----NQQLVPE--------GVAFAPKLEEEKNNIPVSVLATAQGVVIDH 391
Query: 172 PNRDIACK-PMDRQPEVANKGISISMPLQGNLPAPARSDSVLLHPLQRPVSDAQSNECPA 230
P P+ Q S P+ P P V+ +++ E
Sbjct: 392 PTTATTSPFPLSIQSN------SFFSPVIAGNPVPQ---------FHARVASSEAVEPSP 436
Query: 231 TTDTMNQQEELTVEGGTINISSIYSQGLLNNLTQALESAGIDLSQANISVQIDLGKRAN 289
++ + ++E+ V G I ISS+YSQGL+ L +ALE++G+DL++A+ISV+I+L K+++
Sbjct: 437 SSRSQKEEEDEEVLEGNIRISSVYSQGLVKTLREALENSGVDLTKASISVEIELAKQSS 495
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 64/113 (56%), Gaps = 9/113 (7%)
Query: 11 EDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREI 70
ED E++ +KEA + T +K ++++ H+++E+RRR +INE+ + L+E+
Sbjct: 317 EDVEEESGDGRKEAGPSRTGLGSKRSRSAEV-------HNLSERRRRDRINEKMRALQEL 369
Query: 71 IPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEPTKLMPWRNSHW 123
IP+ + K D AS L E IEY++ LQ +VQ ++ + P + P H+
Sbjct: 370 IPNCN-KVDKASMLDEAIEYLKSLQLQVQIMSMA-SGYYLPPAVMFPPGMGHY 420
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 37 KNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQE 96
+NS K ++ H+++E++RRSKINE+ + L+++IP+S+ K D AS L E IEY++ LQ
Sbjct: 86 RNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSN-KTDKASMLDEAIEYLKQLQL 144
Query: 97 KVQKYEV 103
+VQ V
Sbjct: 145 QVQTLAV 151
>sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis thaliana GN=BHLH23 PE=2
SV=1
Length = 413
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 16 DEFMSKKEAASNITNSNAKDGKNSDKASVIRSK--HSVTEQRRRSKINERFQILREIIPH 73
DE K +N+ N ++ ++S + R+ H ++E+RRR KINE + L+E++P
Sbjct: 247 DERKRKTREETNVENQGTEEARDSTSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPR 306
Query: 74 SDQKRDTASFLLEVIEYVQYLQEKVQKYEVSY 105
K D +S L +VIEYV+ LQ ++Q + + +
Sbjct: 307 CT-KTDRSSMLDDVIEYVKSLQSQIQMFSMGH 337
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H+++E++RR K+NERF LR IIP S K D S L + IEY+Q LQ++VQ+ E
Sbjct: 406 HALSEKKRREKLNERFMTLRSIIP-SISKIDKVSILDDTIEYLQDLQKRVQELE 458
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H+V E++RR K+NERF LR+IIP S K D S L + IEY+Q L+ +VQ+ E
Sbjct: 442 HAVLEKKRREKLNERFMTLRKIIP-SINKIDKVSILDDTIEYLQELERRVQELE 494
>sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2
SV=1
Length = 297
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P+++ K D AS L E+IEYV++LQ +V+ +S
Sbjct: 110 HSIAERLRRERIAERMKSLQELVPNTN-KTDKASMLDEIIEYVRFLQLQVKVLSMS 164
>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
SV=1
Length = 350
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDW 108
HS+ E+ RR +I ER + L+E++P+ + K D AS L E+I+YV++LQ +V+ +S
Sbjct: 149 HSIAERLRRERIAERMKALQELVPNGN-KTDKASMLDEIIDYVKFLQLQVKVLSMSRLGG 207
Query: 109 SA 110
+A
Sbjct: 208 AA 209
>sp|Q8GWK7|BEE3_ARATH Transcription factor BEE 3 OS=Arabidopsis thaliana GN=BEE3 PE=2
SV=1
Length = 261
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV----- 103
HS+ E+ RR KINER + L++I+P + A+ L E+I YVQ LQ +V+ +
Sbjct: 158 HSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFLSMKLTAA 217
Query: 104 -SYQDWSAE 111
SY D+++E
Sbjct: 218 SSYYDFNSE 226
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 8 REEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQIL 67
+E E DE S+ E A+ S K S H+++E++RR +INER + L
Sbjct: 253 KEREATTTDETESRSEETKQ-----ARVSTTSTKRSRAAEVHNLSERKRRDRINERMKAL 307
Query: 68 REIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+E+IP + K D AS L E IEY++ LQ ++Q
Sbjct: 308 QELIPRCN-KSDKASMLDEAIEYMKSLQLQIQ 338
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
H+++E+RRRS+INE+ + L+ +IP+S+ K D AS L E IEY++ LQ +VQ
Sbjct: 202 HNLSEKRRRSRINEKMKALQSLIPNSN-KTDKASMLDEAIEYLKQLQLQVQ 251
>sp|Q8S3D5|BH069_ARATH Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2
SV=2
Length = 310
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
HS+ E+ RR +I ER + L+E++P+ + K D AS L E+I+YV++LQ +V+ +S
Sbjct: 141 HSIAERLRRERIAERMKSLQELVPNGN-KTDKASMLDEIIDYVKFLQLQVKVLSMS 195
>sp|Q7XHI7|BH127_ARATH Transcription factor bHLH127 OS=Arabidopsis thaliana GN=BHLH127
PE=2 SV=1
Length = 307
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 24 AASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASF 83
+A I + G S K S H++ E+RRR KINER + L+++IP + K S
Sbjct: 130 SAPRIQGTEEARGSTSRKRSRAAEMHNLAERRRREKINERMKTLQQLIPRCN-KSTKVSM 188
Query: 84 LLEVIEYVQYLQEKVQKY 101
L +VIEYV+ L+ ++ ++
Sbjct: 189 LEDVIEYVKSLEMQINQF 206
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 39 SDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKV 98
S K S + H+ +E++RR KIN+R + L++++P+S K D AS L EVIEY++ LQ +V
Sbjct: 208 STKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNS-SKTDKASMLDEVIEYLKQLQAQV 266
>sp|Q8VZ02|BH048_ARATH Transcription factor bHLH48 OS=Arabidopsis thaliana GN=BHLH48 PE=2
SV=1
Length = 327
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KIN R ++L+E++P D+ + TA L E+I +VQ LQ +V+
Sbjct: 196 HSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQVE 246
>sp|Q8GY61|BH063_ARATH Transcription factor bHLH63 OS=Arabidopsis thaliana GN=BHLH63 PE=2
SV=1
Length = 335
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 27 NITNSNAKDGKNSDKASVIRSK---------HSVTEQRRRSKINERFQILREIIPHSDQK 77
N +N ++K K +K I + HS+ E+ RR KI+ER + L++++P D+
Sbjct: 152 NFSNDSSKVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKI 211
Query: 78 RDTASFLLEVIEYVQYLQEKVQ 99
A L E+I YVQ LQ +++
Sbjct: 212 TGKAGMLDEIINYVQSLQRQIE 233
>sp|Q2HIV9|BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2
SV=1
Length = 248
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 5/102 (4%)
Query: 11 EDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREI 70
ED+E D +EA S +S++ DG S AS K+ V+E+ RR K+N+R LR +
Sbjct: 22 EDFEYDRSWPLEEAISGSYDSSSPDGAASSPAS----KNIVSERNRRQKLNQRLFALRSV 77
Query: 71 IPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSAEP 112
+P+ K D AS + + I Y++ LQ + +K E ++ + P
Sbjct: 78 VPNI-TKMDKASIIKDAISYIEGLQYEEKKLEAEIRELESTP 118
>sp|Q8GZ13|BEE1_ARATH Transcription factor BEE 1 OS=Arabidopsis thaliana GN=BEE1 PE=2
SV=1
Length = 260
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV----- 103
HS+ E+ RR KINER + L++++P + A+ L E+I YVQ LQ +V+ +
Sbjct: 156 HSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVEFLSMKLTAA 215
Query: 104 -SYQDWSAE 111
S+ D+++E
Sbjct: 216 SSFYDFNSE 224
>sp|Q6NKN9|BH074_ARATH Transcription factor bHLH74 OS=Arabidopsis thaliana GN=BHLH74 PE=2
SV=1
Length = 366
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L+E++P ++ A L E+I YVQ LQ++V+
Sbjct: 217 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 267
>sp|Q93W88|BH137_ARATH Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137
PE=2 SV=1
Length = 286
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Query: 20 SKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRD 79
SK+E ++ + A+ G+ +D HS+ E+ RR KI+ER + L+ ++P D+
Sbjct: 125 SKEEPPTDYIHVRARRGQATDS-------HSLAERVRREKISERMRTLQNLVPGCDKVTG 177
Query: 80 TASFLLEVIEYVQYLQEKVQ 99
A L E+I YVQ LQ +V+
Sbjct: 178 KALMLDEIINYVQTLQTQVE 197
>sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Arabidopsis thaliana
GN=BHLH56 PE=4 SV=2
Length = 445
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 20 SKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRD 79
SK +A + G S K S H++ E+RRR KINE+ + L+++IP + K
Sbjct: 231 SKLKAREETHGTEEARGSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCN-KST 289
Query: 80 TASFLLEVIEYVQYLQEKVQ 99
S L + IEYV+ LQ ++Q
Sbjct: 290 KVSTLDDAIEYVKSLQSQIQ 309
>sp|Q8W2F3|PIF4_ARATH Transcription factor PIF4 OS=Arabidopsis thaliana GN=PIF4 PE=1 SV=1
Length = 430
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
Query: 16 DEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSD 75
DE +S +A N +N + + S A V H+++E+RRR +INER + L+E+IPH
Sbjct: 233 DESVSLSDAIGNKSNQRSGSNRRSRAAEV----HNLSERRRRDRINERMKALQELIPHCS 288
Query: 76 QKRDTASFLLEVIEYVQYLQEKVQ 99
K D AS L E I+Y++ LQ ++Q
Sbjct: 289 -KTDKASILDEAIDYLKSLQLQLQ 311
>sp|Q9M0R0|BH081_ARATH Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2
SV=1
Length = 262
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 39/52 (75%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQK 100
S+ E+ RR++I++R + L+E++P+ D++ +TA L E +EYV+ LQ ++Q+
Sbjct: 195 RSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQE 246
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays GN=LC PE=2 SV=1
Length = 610
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
H ++E++RR K+NE F +L+ ++P S + + AS L E I Y++ LQ +VQ+ E S
Sbjct: 417 HVMSERKRREKLNEMFLVLKSLLP-SIHRVNKASILAETIAYLKELQRRVQELESS 471
>sp|Q9CAA9|BH049_ARATH Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=2
SV=1
Length = 486
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER + L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 314 HSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 364
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1
Length = 612
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
H ++E++RR K+NE F +L+ ++P S + + AS L E I Y++ LQ +VQ+ E S
Sbjct: 419 HVMSERKRREKLNEMFLVLKSLLP-SIHRVNKASILAETIAYLKELQRRVQELESS 473
>sp|Q9C670|BH076_ARATH Transcription factor bHLH76 OS=Arabidopsis thaliana GN=BHLH76 PE=2
SV=1
Length = 390
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER + L++++P D+ A L E+I YVQ LQ +++
Sbjct: 234 HSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIE 284
>sp|Q9C8P8|BH080_ARATH Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=1
SV=1
Length = 259
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 39/51 (76%)
Query: 50 SVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQK 100
S+ E+ RR++I++R + L+E++P+ D++ +TA L E +EYV+ LQ ++Q+
Sbjct: 193 SIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQIQE 243
>sp|Q9LK48|BH077_ARATH Transcription factor bHLH77 OS=Arabidopsis thaliana GN=BHLH77 PE=2
SV=1
Length = 371
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 23 EAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTAS 82
EA + + A+ G+ +D HS+ E+ RR KI+ER +L++++P ++ A
Sbjct: 183 EAPKDYIHVRARRGQATDS-------HSLAERARREKISERMTLLQDLVPGCNRITGKAV 235
Query: 83 FLLEVIEYVQYLQEKVQ 99
L E+I YVQ LQ +V+
Sbjct: 236 MLDEIINYVQSLQRQVE 252
>sp|A4D998|BH075_ARATH Transcription factor bHLH75 OS=Arabidopsis thaliana GN=BHLH75 PE=2
SV=1
Length = 223
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 25/136 (18%)
Query: 5 KGNREEEDYEDDEFMSKKEAASN---------ITNSNAKDGKNSDKASVIRSKHSVTEQR 55
KGN+EE + S++E A N + + AK G+ +D HS+ E+
Sbjct: 69 KGNKEESGSKRRRKRSEEEEAMNGDETQKPKDVVHVRAKRGQATDS-------HSLAERV 121
Query: 56 RRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWSA----- 110
RR KINER + L++++P + A L +I+YV+ LQ +++ + SA
Sbjct: 122 RREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFLSMKLSAASACYDLN 181
Query: 111 ----EPTKLMPWRNSH 122
EPT + N H
Sbjct: 182 SLDIEPTDIFQGGNIH 197
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H E++RR K+N+RF LR ++P+ K D AS L + I Y++ LQEKV+ E
Sbjct: 396 HVEAERQRREKLNQRFYALRSVVPNI-SKMDKASLLGDAISYIKELQEKVKIME 448
>sp|Q9SRT2|BH062_ARATH Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2
SV=1
Length = 456
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER ++L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 269 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 319
>sp|Q9FJL4|BH078_ARATH Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=2
SV=1
Length = 498
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI ER ++L++++P ++ A L E+I YVQ LQ +V+
Sbjct: 312 HSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 362
>sp|Q56YJ8|FAMA_ARATH Transcription factor FAMA OS=Arabidopsis thaliana GN=FMA PE=1 SV=1
Length = 414
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 9 EEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILR 68
EEED E+ ++KKE S A+ K S++ R H E+ RR ++NE ++LR
Sbjct: 162 EEEDRENKN-VTKKEVKSK--RKRARTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLR 218
Query: 69 EIIPHSD-QKRDTASFLLEVIEYVQYLQEKVQKYE 102
++P S Q+ D AS + IE+V+ L++ +Q E
Sbjct: 219 SLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLE 253
>sp|Q7XAQ6|LAX_ORYSJ Transcription factor LAX PANICLE OS=Oryza sativa subsp. japonica
GN=LAX PE=1 SV=1
Length = 215
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 50 SVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
SV + RR +I++RF++LR ++P K DT S L + I YV++L+ +V ++ +
Sbjct: 46 SVAARERRHRISDRFRVLRSLVP-GGSKMDTVSMLEQAIHYVKFLKAQVTLHQAA 99
>sp|Q9ZPW3|BH064_ARATH Transcription factor bHLH64 OS=Arabidopsis thaliana GN=BHLH64 PE=2
SV=3
Length = 337
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 19 MSKKEAASNITNSNAKDGKNSDKASVIR---------SKHSVTEQRRRSKINERFQILRE 69
M EA+S+ + +K + K I +HS+ E+ RR KI+++ + L++
Sbjct: 157 MGNTEASSDTSKETSKGASENQKLDYIHVRARRGQATDRHSLAERARREKISKKMKYLQD 216
Query: 70 IIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
I+P ++ A L E+I YVQ LQ +V+
Sbjct: 217 IVPGCNKVTGKAGMLDEIINYVQCLQRQVE 246
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H E++RR K+N+RF LR ++P+ K D AS L + I Y+ L+ K+QK E
Sbjct: 417 HVEAERQRREKLNQRFYSLRAVVPNV-SKMDKASLLGDAISYISELKSKLQKAE 469
>sp|O23487|BH003_ARATH Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2
SV=1
Length = 467
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQ 106
H E++RR K+N+RF LR ++P+ K D AS L + I Y+ +Q+K++ YE Q
Sbjct: 321 HVEAERQRREKLNQRFYALRAVVPNI-SKMDKASLLADAITYITDMQKKIRVYETEKQ 377
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2
Length = 518
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQD 107
H V E+RRR K+NE+F LR ++P K D S L + I YV +L+++V + E ++ +
Sbjct: 364 HVVAERRRREKLNEKFITLRSMVPFV-TKMDKVSILGDTIAYVNHLRKRVHELENTHHE 421
>sp|Q9XEF0|BH051_ARATH Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2
SV=1
Length = 254
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 40 DKASVIRSKHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
+KA + H + E+RRR +IN LR+++P+SD K D A+ L VIE V+ L++K
Sbjct: 58 EKAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSD-KLDKAALLATVIEQVKELKQKAA 116
Query: 100 KYEVSYQD 107
+ + +QD
Sbjct: 117 ESPI-FQD 123
>sp|Q0V7X4|FIT_ARATH Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION
FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1
Length = 318
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 24/127 (18%)
Query: 6 GNREEEDYEDDEFMSKKEAASNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQ 65
G +EEDY D + ++++ TN++ +D RS+ ++E+RRR ++ ++
Sbjct: 99 GEEDEEDYNDGD-----DSSATTTNNDGTRKTKTD-----RSRTLISERRRRGRMKDKLY 148
Query: 66 ILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEV-------------SYQDWSAEP 112
LR ++P+ K D AS + + + YVQ LQ + +K + YQ+ + +
Sbjct: 149 ALRSLVPNI-TKMDKASIVGDAVLYVQELQSQAKKLKSDIAGLEASLNSTGGYQEHAPDA 207
Query: 113 TKLMPWR 119
K P+R
Sbjct: 208 QKTQPFR 214
>sp|Q9LV17|BH079_ARATH Transcription factor bHLH79 OS=Arabidopsis thaliana GN=BHLH79 PE=2
SV=1
Length = 281
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 48 KHSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ----KYEV 103
+HS+ E+ RR KI+E+ L++IIP ++ A L E+I Y+Q LQ +V+ K EV
Sbjct: 163 RHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEFLSMKLEV 222
Query: 104 SYQDWSAEPT 113
S PT
Sbjct: 223 VNSGASTGPT 232
>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2
Length = 623
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYE 102
H E++RR K+N+RF LR ++P+ K D AS L + I Y+ L+ KV K E
Sbjct: 453 HVEAERQRREKLNQRFYALRAVVPNV-SKMDKASLLGDAIAYINELKSKVVKTE 505
>sp|O81313|IND_ARATH Transcription factor IND OS=Arabidopsis thaliana GN=IND PE=1 SV=3
Length = 198
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 50 SVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVSYQDWS 109
+V +RRR +I+E+ +IL+ I+P K DTAS L E I Y ++L+ +V+ + Q +
Sbjct: 124 TVVARRRRERISEKIRILKRIVP-GGAKMDTASMLDEAIRYTKFLKRQVRILQPHSQIGA 182
Query: 110 --AEPTKLMPWRNS 121
A P+ L + NS
Sbjct: 183 PMANPSYLCYYHNS 196
>sp|Q7XHI9|BH084_ARATH Transcription factor bHLH84 OS=Arabidopsis thaliana GN=BHLH84 PE=2
SV=1
Length = 328
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 16 DEFMSKKEAA-SNITNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPHS 74
D F+SK++ S N N GK S+ ++RR +INER +IL+ ++P+
Sbjct: 217 DTFLSKEDGEDSKALNLN---GKTRASRGAATDPQSLYARKRRERINERLRILQHLVPNG 273
Query: 75 DQKRDTASFLLEVIEYVQYLQEKVQ 99
K D ++ L E ++YV++LQ +++
Sbjct: 274 -TKVDISTMLEEAVQYVKFLQLQIK 297
>sp|Q0JXE7|BPE_ARATH Transcription factor BPE OS=Arabidopsis thaliana GN=BPE PE=2 SV=1
Length = 343
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 49 HSVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQ 99
HS+ E+ RR KI+ER +IL++++P ++ A L E+I Y+Q LQ +V+
Sbjct: 147 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 197
>sp|Q9C690|BH122_ARATH Transcription factor bHLH122 OS=Arabidopsis thaliana GN=BHLH122
PE=1 SV=1
Length = 379
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 39/55 (70%)
Query: 50 SVTEQRRRSKINERFQILREIIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEVS 104
S+ E+ RR+KI+ER + L++++P+ D + +TA L ++Y++ LQE+V+ E S
Sbjct: 316 SIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQVKALEES 370
>sp|Q93VJ4|BEE2_ARATH Transcription factor BEE 2 OS=Arabidopsis thaliana GN=BEE2 PE=2
SV=1
Length = 304
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 12/86 (13%)
Query: 19 MSKKEAASNI-----TNSNAKDGKNSDKASVIRSKHSVTEQRRRSKINERFQILREIIPH 73
MS E +S I + A+ G+ +D+ HS+ E+ RR KI+++ + L++I+P
Sbjct: 124 MSNTETSSEIQKPDYIHVRARRGEATDR-------HSLAERARREKISKKMKCLQDIVPG 176
Query: 74 SDQKRDTASFLLEVIEYVQYLQEKVQ 99
++ A L E+I YVQ LQ++V+
Sbjct: 177 CNKVTGKAGMLDEIINYVQSLQQQVE 202
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.125 0.348
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 120,971,095
Number of Sequences: 539616
Number of extensions: 5011325
Number of successful extensions: 14034
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 234
Number of HSP's that attempted gapping in prelim test: 13844
Number of HSP's gapped (non-prelim): 353
length of query: 333
length of database: 191,569,459
effective HSP length: 118
effective length of query: 215
effective length of database: 127,894,771
effective search space: 27497375765
effective search space used: 27497375765
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 61 (28.1 bits)