BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019962
(333 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8C1A9|CD029_MOUSE Uncharacterized protein C4orf29 homolog OS=Mus musculus PE=2 SV=1
Length = 464
Score = 125 bits (314), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 129/250 (51%), Gaps = 8/250 (3%)
Query: 20 FMHRTKISPPFFSRGWGGSKLELLERLI---KQLFPEIEGQNWPPSLIQPIWRTIWETQT 76
++R + F RGWG + E L+RL K + QN S + E
Sbjct: 8 ILYRRLLLTKLFIRGWG--RPEDLKRLFEFRKMIGNRERCQNLVSSDYPVHIDKVEEQSD 65
Query: 77 AVLREGVFRTPCDEQLMSALPPESHNARVAFLAPKCVPPQKMACVVHLAGTGDHTF-ERR 135
+ +G F +P + +P ES AR F+ PK + +HLAGTGDH + RR
Sbjct: 66 CKILDGHFVSPMAHYVPGIMPIESVVARFQFIVPKEWNSRYRPVCIHLAGTGDHHYWRRR 125
Query: 136 LRLGGPLLKE-NIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWL 194
+ P++KE +A+++LE+P+YG R+P Q + L VSDL ++G A I E+ LLHWL
Sbjct: 126 TLMARPMIKEARMASLLLENPYYGCRKPKDQVRSSLKNVSDLFVMGGALILESAALLHWL 185
Query: 195 EWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAVVAFCEGILKHGTAWEA 254
E E G+G +G+ G+SMGG A++ S P P+ +P LS +A F G+L W
Sbjct: 186 ERE-GYGPLGMTGISMGGHMASLAVSNWPKPMPLIPCLSWSTASGVFTTGVLSKSINWRE 244
Query: 255 LREELAAKKV 264
L ++ + V
Sbjct: 245 LEKQYYTQTV 254
>sp|Q4V7A8|CD029_RAT Uncharacterized protein C4orf29 homolog OS=Rattus norvegicus PE=2
SV=2
Length = 464
Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 127/250 (50%), Gaps = 8/250 (3%)
Query: 20 FMHRTKISPPFFSRGWGGSKLELLERLI---KQLFPEIEGQNWPPSLIQPIWRTIWETQT 76
++R + F RGWG + E L+RL K + QN S + E
Sbjct: 8 ILYRRLLLTKLFIRGWG--RPEDLKRLFEFRKMIGNRERCQNLVSSDYPVHIDKVEEQSD 65
Query: 77 AVLREGVFRTPCDEQLMSALPPESHNARVAFLAPKCVPPQKMACVVHLAGTGDHTF-ERR 135
+ +G F +P + +P ES AR F+ PK + +HLAGTGDH + RR
Sbjct: 66 CKILDGHFVSPMAHYVPGIMPIESVIARFQFIVPKEWNSRYRPVCIHLAGTGDHHYWRRR 125
Query: 136 LRLGGPLLKE-NIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWL 194
+ P++KE +A+++LE+P+Y +P Q + L VSDL ++G A I E+ LLHWL
Sbjct: 126 TLMARPMIKEARMASLLLENPYYILLKPKDQVRSSLKNVSDLFVMGGALILESAALLHWL 185
Query: 195 EWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAVVAFCEGILKHGTAWEA 254
E E G+G +G+ G+SMGG A++ S P P+ +P LS +A F G+L W
Sbjct: 186 ERE-GYGPLGMTGISMGGHMASLAVSNWPKPMPLIPCLSWSTASGVFTTGVLSKSINWRE 244
Query: 255 LREELAAKKV 264
L ++ + V
Sbjct: 245 LEKQYYTQTV 254
>sp|Q0P651|CD029_HUMAN Uncharacterized protein C4orf29 OS=Homo sapiens GN=C4orf29 PE=2
SV=1
Length = 414
Score = 115 bits (287), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 120/227 (52%), Gaps = 8/227 (3%)
Query: 20 FMHRTKISPPFFSRGWGGSKLELLERLI---KQLFPEIEGQNWPPSLIQPIWRTIWETQT 76
++R + F RGWG + E L+RL K + QN S I E
Sbjct: 8 ILYRRLLLTKLFIRGWG--RPEDLKRLFEFRKMIGNRERCQNLVSSDYPVHIDKIEEQSD 65
Query: 77 AVLREGVFRTPCDEQLMSALPPESHNARVAFLAPKCVPPQKMACVVHLAGTGDHTF-ERR 135
+ +G F +P + +P ES AR F+ PK + +HLAGTGDH + RR
Sbjct: 66 CKILDGHFVSPMAHYVPDIMPIESVIARFQFIVPKEWNSKYRPVCIHLAGTGDHHYWRRR 125
Query: 136 LRLGGPLLKE-NIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWL 194
+ P++KE +A+++LE+P+YG R+P Q + L VSDL ++G A + E+ LLHWL
Sbjct: 126 TLMARPMIKEARMASLLLENPYYGCRKPKDQVRSSLKNVSDLFVMGGALVLESAALLHWL 185
Query: 195 EWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAVVAF 241
E E G+G +G+ G+SMGG A++ S P P+ +P LS +A F
Sbjct: 186 ERE-GYGPLGMTGISMGGHMASLAVSNWPKPMPLIPCLSWSTASGVF 231
>sp|Q6GLL2|ABH6A_XENLA Monoacylglycerol lipase abhd6-A OS=Xenopus laevis GN=abhd6-a PE=2
SV=1
Length = 337
Score = 35.4 bits (80), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 207 GLSMGGVHAAMVGSLHPTPVATLPFLSPHSAVVAFCEGILKHGTAWEALREELAAKKVAM 266
G SMGG A + + HPT +++L + P + LKH E ++ +
Sbjct: 146 GTSMGGNVAGVYAAQHPTDISSLTLICPAGLMYPTESKFLKHLKGLEKSGDDQRILLIPS 205
Query: 267 TLEEVRERMRNVLSLTDVTRFPIPK 291
T E M ++L L RF IP+
Sbjct: 206 TAGE----MEDMLRLCSFVRFKIPQ 226
>sp|B8DDU2|FAPR_LISMH Transcription factor FapR OS=Listeria monocytogenes serotype 4a
(strain HCC23) GN=fapR PE=3 SV=1
Length = 189
Score = 32.3 bits (72), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 13/87 (14%)
Query: 247 KHGTAWEALREELAAKKVAMTLEEVRERMRNVLSLT---DVTRFPIPKIPNAVIFVAATV 303
K G + + +R + +VA+++ E+RER+++V S+T V PI ++ +I + +
Sbjct: 31 KFGVSVQTIRLD----RVALSIPELRERIKHVASVTYADAVKSLPIDEVIGEIIDIQLSK 86
Query: 304 S--TVFDYHHEEVLKMDS----QHFFA 324
S ++FD E V K + H FA
Sbjct: 87 SAISIFDVRSEHVFKRNKIARGHHLFA 113
>sp|Q7SY73|ABH6B_XENLA Monoacylglycerol lipase abhd6-B OS=Xenopus laevis GN=abhd6-b PE=2
SV=1
Length = 337
Score = 32.3 bits (72), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
Query: 205 VCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAVVAFCEGILKHGTAWEALREELAAKKV 264
+ G SMGG A + + HPT +++L + P + LK E + +
Sbjct: 144 LVGTSMGGNVAGVYAAQHPTHISSLTLICPAGLMYPIESKFLKQLKVLEKSGDNQRIPLI 203
Query: 265 AMTLEEVRERMRNVLSLTDVTRFPIPK 291
T E M ++L L RF IP+
Sbjct: 204 PSTAGE----MEDMLRLCSFVRFKIPQ 226
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.139 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,267,042
Number of Sequences: 539616
Number of extensions: 5271434
Number of successful extensions: 15574
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 15565
Number of HSP's gapped (non-prelim): 10
length of query: 333
length of database: 191,569,459
effective HSP length: 118
effective length of query: 215
effective length of database: 127,894,771
effective search space: 27497375765
effective search space used: 27497375765
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)