Query 019962
Match_columns 333
No_of_seqs 166 out of 201
Neff 5.5
Searched_HMMs 46136
Date Fri Mar 29 05:55:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019962.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019962hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF09752 DUF2048: Uncharacteri 100.0 2E-80 4.3E-85 601.4 24.7 287 28-318 1-314 (348)
2 KOG1551 Uncharacterized conser 100.0 1.5E-71 3.3E-76 520.1 15.4 310 2-317 1-330 (371)
3 COG1647 Esterase/lipase [Gener 99.5 1.1E-13 2.4E-18 128.1 12.1 178 116-317 15-205 (243)
4 PRK05077 frsA fermentation/res 99.5 1.1E-12 2.5E-17 131.3 17.5 189 107-319 185-381 (414)
5 TIGR03343 biphenyl_bphD 2-hydr 99.5 4.3E-13 9.3E-18 123.3 11.7 103 117-235 31-135 (282)
6 PRK10566 esterase; Provisional 99.5 2.5E-12 5.4E-17 117.0 16.5 187 108-318 17-211 (249)
7 PHA02857 monoglyceride lipase; 99.4 2.4E-12 5.2E-17 118.8 14.4 105 117-234 25-130 (276)
8 PLN02965 Probable pheophorbida 99.4 3.6E-12 7.9E-17 117.2 15.2 99 118-235 5-106 (255)
9 TIGR02240 PHA_depoly_arom poly 99.4 2.5E-12 5.4E-17 119.4 13.9 101 116-236 25-126 (276)
10 TIGR03611 RutD pyrimidine util 99.4 3E-12 6.4E-17 113.6 13.5 98 117-234 14-113 (257)
11 PLN02824 hydrolase, alpha/beta 99.4 5.8E-12 1.3E-16 117.7 15.5 104 117-235 30-136 (294)
12 PLN02385 hydrolase; alpha/beta 99.4 1.8E-12 3.8E-17 125.4 12.2 104 117-235 88-196 (349)
13 PLN02298 hydrolase, alpha/beta 99.4 4.8E-12 1E-16 120.8 13.8 107 117-235 60-168 (330)
14 TIGR01250 pro_imino_pep_2 prol 99.4 1.8E-11 3.9E-16 109.8 15.2 107 116-236 25-131 (288)
15 PRK13604 luxD acyl transferase 99.4 1.1E-11 2.3E-16 120.3 14.7 177 122-318 41-227 (307)
16 PRK10749 lysophospholipase L2; 99.4 2.8E-11 6.2E-16 116.4 17.0 110 117-236 55-166 (330)
17 PLN02211 methyl indole-3-aceta 99.4 2.2E-11 4.7E-16 114.7 15.5 114 103-235 7-121 (273)
18 COG3571 Predicted hydrolase of 99.3 3E-12 6.5E-17 114.0 8.0 100 118-233 16-121 (213)
19 PF12697 Abhydrolase_6: Alpha/ 99.3 4.4E-12 9.6E-17 108.7 8.7 100 120-237 2-102 (228)
20 TIGR02427 protocat_pcaD 3-oxoa 99.3 3.1E-11 6.8E-16 105.5 14.0 99 117-235 13-113 (251)
21 PRK10673 acyl-CoA esterase; Pr 99.3 5.1E-11 1.1E-15 107.7 14.5 110 104-234 4-114 (255)
22 PRK03592 haloalkane dehalogena 99.3 4.6E-11 9.9E-16 111.8 14.2 99 116-234 27-126 (295)
23 TIGR03101 hydr2_PEP hydrolase, 99.3 1.8E-11 3.8E-16 116.5 11.5 126 106-245 15-143 (266)
24 KOG1454 Predicted hydrolase/ac 99.3 9.1E-12 2E-16 121.5 8.8 97 115-230 57-157 (326)
25 TIGR03056 bchO_mg_che_rel puta 99.3 5.3E-11 1.1E-15 108.0 13.3 98 117-234 29-128 (278)
26 PRK10349 carboxylesterase BioH 99.3 6E-11 1.3E-15 108.4 13.4 93 117-234 14-107 (256)
27 TIGR01840 esterase_phb esteras 99.3 1.7E-10 3.7E-15 104.2 15.3 192 107-323 3-198 (212)
28 PRK06489 hypothetical protein; 99.2 6.8E-11 1.5E-15 115.1 12.2 104 117-234 70-187 (360)
29 PRK00870 haloalkane dehalogena 99.2 6.5E-11 1.4E-15 111.5 11.0 100 117-235 47-149 (302)
30 TIGR03695 menH_SHCHC 2-succiny 99.2 2.5E-10 5.5E-15 99.2 13.6 102 117-235 2-104 (251)
31 PLN02578 hydrolase 99.2 3E-10 6.6E-15 110.5 13.9 99 116-234 86-185 (354)
32 TIGR01738 bioH putative pimelo 99.2 2.7E-10 5.8E-15 99.5 11.9 94 117-235 5-99 (245)
33 PRK14875 acetoin dehydrogenase 99.2 4.2E-10 9.1E-15 107.8 14.1 99 117-235 132-231 (371)
34 PLN02652 hydrolase; alpha/beta 99.2 1.9E-09 4E-14 107.7 18.9 118 104-235 124-244 (395)
35 PRK08775 homoserine O-acetyltr 99.1 2E-10 4.2E-15 111.1 10.1 101 116-235 57-172 (343)
36 PRK10985 putative hydrolase; P 99.1 3.6E-10 7.8E-15 108.7 11.3 102 117-233 59-165 (324)
37 PRK07581 hypothetical protein; 99.1 3E-10 6.5E-15 109.0 10.7 113 117-235 41-158 (339)
38 PLN03087 BODYGUARD 1 domain co 99.1 1.2E-09 2.5E-14 112.0 15.5 100 117-234 202-307 (481)
39 PF12695 Abhydrolase_5: Alpha/ 99.1 4.6E-10 9.9E-15 93.0 10.3 129 119-320 2-131 (145)
40 PRK03204 haloalkane dehalogena 99.1 4.9E-10 1.1E-14 105.7 11.7 100 116-235 34-135 (286)
41 PF12715 Abhydrolase_7: Abhydr 99.1 4.2E-10 9.1E-15 111.8 11.6 154 65-230 74-255 (390)
42 PF05448 AXE1: Acetyl xylan es 99.1 1.8E-09 3.9E-14 105.2 14.7 217 73-315 50-284 (320)
43 TIGR01836 PHA_synth_III_C poly 99.1 3.3E-09 7.1E-14 103.0 15.8 105 115-234 61-169 (350)
44 PLN03084 alpha/beta hydrolase 99.1 2.7E-09 5.8E-14 106.3 14.5 101 117-236 128-232 (383)
45 PLN02442 S-formylglutathione h 99.1 4.9E-09 1.1E-13 99.6 15.4 151 74-235 13-177 (283)
46 TIGR02821 fghA_ester_D S-formy 99.0 6.7E-09 1.5E-13 97.8 16.0 151 75-236 9-173 (275)
47 PRK11126 2-succinyl-6-hydroxy- 99.0 8.6E-10 1.9E-14 99.1 9.5 97 117-234 3-100 (242)
48 PLN02511 hydrolase 99.0 4.6E-09 1E-13 104.2 15.3 95 118-225 102-197 (388)
49 TIGR01392 homoserO_Ac_trn homo 99.0 2.1E-09 4.6E-14 104.2 10.7 113 117-235 32-161 (351)
50 PRK11071 esterase YqiA; Provis 99.0 2.9E-09 6.3E-14 95.7 10.4 149 118-318 3-161 (190)
51 PF06500 DUF1100: Alpha/beta h 99.0 1.6E-08 3.5E-13 101.6 15.7 192 106-320 180-379 (411)
52 PLN02679 hydrolase, alpha/beta 99.0 2.4E-09 5.3E-14 104.6 9.4 99 117-235 89-190 (360)
53 PF00326 Peptidase_S9: Prolyl 98.9 9.5E-09 2.1E-13 92.2 11.8 162 137-318 5-169 (213)
54 TIGR01249 pro_imino_pep_1 prol 98.9 5.4E-09 1.2E-13 99.2 10.6 102 116-234 27-128 (306)
55 COG2267 PldB Lysophospholipase 98.9 1.6E-08 3.4E-13 97.5 13.6 108 117-238 35-144 (298)
56 KOG4409 Predicted hydrolase/ac 98.9 2.4E-09 5.2E-14 105.0 7.9 109 116-240 90-200 (365)
57 COG1506 DAP2 Dipeptidyl aminop 98.9 6.6E-09 1.4E-13 109.2 10.5 192 102-319 377-577 (620)
58 KOG1455 Lysophospholipase [Lip 98.9 2.9E-08 6.3E-13 95.9 12.8 186 118-319 56-272 (313)
59 PRK00175 metX homoserine O-ace 98.9 1.9E-08 4.2E-13 99.1 11.8 85 140-235 85-181 (379)
60 PF01738 DLH: Dienelactone hyd 98.8 4.9E-08 1.1E-12 88.1 13.2 119 107-231 5-128 (218)
61 TIGR01607 PST-A Plasmodium sub 98.8 5.9E-08 1.3E-12 94.2 14.6 80 137-223 65-164 (332)
62 PLN02894 hydrolase, alpha/beta 98.8 1.7E-08 3.8E-13 100.6 10.4 104 116-235 105-210 (402)
63 TIGR03100 hydr1_PEP hydrolase, 98.8 3E-08 6.5E-13 93.4 11.1 104 117-235 27-133 (274)
64 PRK05855 short chain dehydroge 98.7 9E-08 2E-12 96.9 12.5 85 117-221 26-114 (582)
65 COG0412 Dienelactone hydrolase 98.7 4.9E-07 1.1E-11 84.5 15.3 125 101-231 12-142 (236)
66 TIGR01838 PHA_synth_I poly(R)- 98.7 4.7E-07 1E-11 94.1 16.3 119 101-234 172-300 (532)
67 KOG4178 Soluble epoxide hydrol 98.7 2.6E-07 5.6E-12 90.1 13.5 111 110-237 37-149 (322)
68 PLN02980 2-oxoglutarate decarb 98.7 2.1E-07 4.5E-12 107.6 13.9 101 117-234 1372-1478(1655)
69 PRK11460 putative hydrolase; P 98.6 8.2E-07 1.8E-11 82.1 14.9 85 187-318 87-173 (232)
70 PF02230 Abhydrolase_2: Phosph 98.6 5.8E-07 1.3E-11 81.6 12.4 77 200-318 104-180 (216)
71 TIGR03230 lipo_lipase lipoprot 98.6 1.9E-07 4.2E-12 94.9 10.2 107 117-236 42-154 (442)
72 PF10503 Esterase_phd: Esteras 98.6 6.1E-07 1.3E-11 83.5 11.9 191 105-322 3-198 (220)
73 cd00707 Pancreat_lipase_like P 98.6 1.7E-07 3.6E-12 89.2 8.2 106 117-236 37-147 (275)
74 TIGR00976 /NonD putative hydro 98.6 3.6E-07 7.8E-12 94.5 11.0 117 103-234 9-131 (550)
75 PLN00021 chlorophyllase 98.5 5.7E-07 1.2E-11 87.5 11.0 101 102-224 38-149 (313)
76 PRK07868 acyl-CoA synthetase; 98.5 1.2E-06 2.6E-11 96.7 14.8 103 116-233 67-174 (994)
77 KOG1552 Predicted alpha/beta h 98.4 1.4E-06 3.1E-11 82.6 10.6 153 120-321 62-220 (258)
78 COG3458 Acetyl esterase (deace 98.4 5.6E-06 1.2E-10 79.5 13.2 220 65-312 41-278 (321)
79 PF00561 Abhydrolase_1: alpha/ 98.4 7.3E-07 1.6E-11 78.0 6.1 77 147-235 1-78 (230)
80 COG2945 Predicted hydrolase of 98.3 5.5E-06 1.2E-10 75.9 11.5 80 137-229 51-131 (210)
81 COG0429 Predicted hydrolase of 98.3 1.3E-05 2.7E-10 78.8 14.8 188 117-317 76-298 (345)
82 PLN02872 triacylglycerol lipas 98.3 1.3E-06 2.9E-11 87.5 8.3 151 63-235 40-196 (395)
83 KOG2984 Predicted hydrolase [G 98.2 1.9E-06 4E-11 79.9 5.4 179 122-317 46-240 (277)
84 COG0596 MhpC Predicted hydrola 98.2 5.3E-06 1.1E-10 70.7 7.8 102 117-236 22-123 (282)
85 PRK05371 x-prolyl-dipeptidyl a 98.2 1E-05 2.2E-10 87.5 11.3 84 138-233 271-371 (767)
86 PF07859 Abhydrolase_3: alpha/ 98.2 5.8E-05 1.3E-09 67.0 13.9 84 120-221 2-91 (211)
87 PF02129 Peptidase_S15: X-Pro 98.1 3.4E-05 7.3E-10 72.5 11.8 136 104-253 6-158 (272)
88 PRK10162 acetyl esterase; Prov 98.1 2E-05 4.3E-10 76.2 10.0 98 103-221 69-174 (318)
89 TIGR03502 lipase_Pla1_cef extr 98.0 5.7E-05 1.2E-09 81.8 12.1 100 118-224 451-578 (792)
90 PRK06765 homoserine O-acetyltr 97.9 0.00014 3.1E-09 72.8 13.5 101 130-234 82-194 (389)
91 COG0657 Aes Esterase/lipase [L 97.9 0.00034 7.3E-09 66.7 15.1 114 104-236 65-192 (312)
92 PRK10115 protease 2; Provision 97.8 0.00025 5.3E-09 76.0 13.8 161 139-319 467-632 (686)
93 PF00756 Esterase: Putative es 97.8 0.00012 2.5E-09 67.0 9.7 131 100-235 5-149 (251)
94 KOG2382 Predicted alpha/beta h 97.8 0.00062 1.3E-08 66.7 13.9 109 109-232 45-155 (315)
95 PRK10439 enterobactin/ferric e 97.7 0.00047 1E-08 69.7 13.4 137 74-235 175-322 (411)
96 PF05728 UPF0227: Uncharacteri 97.7 0.00019 4.1E-09 65.2 9.3 152 122-317 3-158 (187)
97 KOG4667 Predicted esterase [Li 97.7 0.00027 5.8E-09 66.3 10.3 177 117-318 34-224 (269)
98 TIGR01839 PHA_synth_II poly(R) 97.7 0.00098 2.1E-08 69.9 15.6 119 100-234 198-326 (560)
99 PF00975 Thioesterase: Thioest 97.6 0.00015 3.2E-09 65.1 7.1 97 117-233 1-101 (229)
100 COG3509 LpqC Poly(3-hydroxybut 97.6 0.00039 8.5E-09 67.5 10.1 127 101-233 45-176 (312)
101 PF01674 Lipase_2: Lipase (cla 97.5 0.00011 2.5E-09 68.4 5.2 89 117-219 2-93 (219)
102 PF08840 BAAT_C: BAAT / Acyl-C 97.5 6.2E-05 1.3E-09 69.1 3.0 48 188-236 7-56 (213)
103 KOG1838 Alpha/beta hydrolase [ 97.5 0.0016 3.5E-08 65.8 13.1 91 117-220 126-217 (409)
104 COG4757 Predicted alpha/beta h 97.4 0.00062 1.3E-08 64.5 8.8 78 136-220 47-124 (281)
105 PF03959 FSH1: Serine hydrolas 97.4 0.00062 1.3E-08 62.2 8.6 103 117-221 5-122 (212)
106 KOG4391 Predicted alpha/beta h 97.4 0.00086 1.9E-08 63.1 9.2 165 116-317 77-245 (300)
107 PF12740 Chlorophyllase2: Chlo 97.4 0.0016 3.5E-08 62.3 10.8 109 107-236 8-131 (259)
108 PF06342 DUF1057: Alpha/beta h 97.3 0.002 4.4E-08 62.4 10.2 178 117-316 36-235 (297)
109 KOG2100 Dipeptidyl aminopeptid 97.2 0.0021 4.5E-08 69.8 11.2 190 101-317 508-706 (755)
110 TIGR01849 PHB_depoly_PhaZ poly 97.2 0.014 3.1E-07 59.2 15.8 92 124-234 108-206 (406)
111 KOG2564 Predicted acetyltransf 97.1 0.0033 7.1E-08 61.1 10.0 111 96-221 53-166 (343)
112 PF07819 PGAP1: PGAP1-like pro 97.1 0.0021 4.4E-08 59.8 8.5 42 198-239 82-127 (225)
113 PF11339 DUF3141: Protein of u 97.1 0.018 3.9E-07 60.0 15.9 114 101-233 50-172 (581)
114 COG0400 Predicted esterase [Ge 97.0 0.0057 1.2E-07 56.6 10.6 85 189-319 86-172 (207)
115 PF06028 DUF915: Alpha/beta hy 97.0 0.0057 1.2E-07 58.3 10.5 112 186-316 88-213 (255)
116 KOG3043 Predicted hydrolase re 97.0 0.0018 4E-08 60.8 6.6 83 136-225 57-144 (242)
117 PLN02733 phosphatidylcholine-s 96.9 0.0017 3.6E-08 66.4 6.4 87 131-234 108-199 (440)
118 COG3208 GrsT Predicted thioest 96.9 0.0074 1.6E-07 57.3 9.8 172 119-320 10-203 (244)
119 PF00151 Lipase: Lipase; Inte 96.9 0.0037 8.1E-08 61.5 8.2 106 117-236 72-187 (331)
120 PF12146 Hydrolase_4: Putative 96.8 0.003 6.5E-08 49.6 5.8 42 118-162 18-59 (79)
121 KOG2112 Lysophospholipase [Lip 96.6 0.019 4E-07 53.3 10.0 104 121-229 6-121 (206)
122 PRK10252 entF enterobactin syn 96.5 0.012 2.6E-07 66.0 9.8 98 117-234 1069-1169(1296)
123 KOG2281 Dipeptidyl aminopeptid 96.5 0.027 5.7E-07 60.0 11.5 150 141-317 671-826 (867)
124 COG4188 Predicted dienelactone 96.5 0.011 2.4E-07 59.0 8.3 116 101-224 50-182 (365)
125 PF05577 Peptidase_S28: Serine 96.4 0.024 5.3E-07 56.9 10.5 114 110-228 22-140 (434)
126 cd00741 Lipase Lipase. Lipase 96.4 0.0081 1.8E-07 51.5 6.0 40 185-224 12-51 (153)
127 PF03583 LIP: Secretory lipase 96.4 0.043 9.4E-07 52.8 11.6 72 137-221 17-91 (290)
128 PF06821 Ser_hydrolase: Serine 96.3 0.02 4.3E-07 51.1 8.5 81 201-318 55-139 (171)
129 PF02273 Acyl_transf_2: Acyl t 96.3 0.093 2E-06 50.4 13.1 97 110-220 22-120 (294)
130 PF06057 VirJ: Bacterial virul 96.2 0.0063 1.4E-07 55.8 4.8 97 122-237 6-108 (192)
131 PF01764 Lipase_3: Lipase (cla 96.0 0.0094 2E-07 49.7 4.6 33 188-221 52-84 (140)
132 PF10230 DUF2305: Uncharacteri 95.9 0.22 4.9E-06 47.3 13.8 105 120-234 4-120 (266)
133 COG2021 MET2 Homoserine acetyl 95.9 0.055 1.2E-06 54.2 10.0 101 131-235 76-181 (368)
134 COG3319 Thioesterase domains o 95.9 0.021 4.6E-07 54.5 6.7 97 117-233 1-100 (257)
135 KOG2565 Predicted hydrolases o 95.8 0.022 4.8E-07 57.3 6.9 95 116-227 152-255 (469)
136 COG2936 Predicted acyl esteras 95.8 0.034 7.4E-07 58.5 8.5 128 104-247 33-173 (563)
137 KOG3101 Esterase D [General fu 95.8 0.019 4.1E-07 54.0 5.7 131 103-234 28-174 (283)
138 COG4099 Predicted peptidase [G 95.7 0.024 5.2E-07 55.7 6.3 34 200-233 268-301 (387)
139 PF05677 DUF818: Chlamydia CHL 95.7 0.028 6.1E-07 55.9 6.9 69 141-223 165-237 (365)
140 PRK04940 hypothetical protein; 95.6 0.078 1.7E-06 48.3 9.1 85 201-313 60-144 (180)
141 PF08538 DUF1749: Protein of u 95.6 0.025 5.5E-07 55.3 6.3 100 120-237 35-149 (303)
142 cd00519 Lipase_3 Lipase (class 95.6 0.024 5.1E-07 51.9 5.6 26 197-222 124-149 (229)
143 COG3545 Predicted esterase of 95.5 0.15 3.1E-06 46.5 10.2 85 200-318 58-142 (181)
144 PF07224 Chlorophyllase: Chlor 95.3 0.13 2.8E-06 49.9 9.5 95 107-223 37-142 (307)
145 PF10142 PhoPQ_related: PhoPQ- 95.2 0.038 8.2E-07 55.4 6.2 239 72-318 21-287 (367)
146 PF03403 PAF-AH_p_II: Platelet 95.2 0.093 2E-06 52.6 8.7 118 117-237 100-264 (379)
147 PF05057 DUF676: Putative seri 95.2 0.09 2E-06 48.3 8.0 43 176-220 55-97 (217)
148 KOG4627 Kynurenine formamidase 94.9 0.06 1.3E-06 50.6 6.1 153 117-325 68-232 (270)
149 cd00312 Esterase_lipase Estera 94.7 0.094 2E-06 53.2 7.5 123 101-234 77-211 (493)
150 COG1073 Hydrolases of the alph 94.6 0.059 1.3E-06 48.8 5.1 87 138-224 68-155 (299)
151 KOG1515 Arylacetamide deacetyl 94.5 0.22 4.7E-06 49.5 9.3 123 102-244 73-215 (336)
152 PF12048 DUF3530: Protein of u 93.9 1.1 2.4E-05 43.8 12.6 115 121-236 90-229 (310)
153 KOG2551 Phospholipase/carboxyh 93.8 0.72 1.6E-05 43.5 10.7 161 117-318 6-188 (230)
154 smart00824 PKS_TE Thioesterase 93.8 0.25 5.5E-06 42.3 7.3 79 138-233 18-99 (212)
155 PF05990 DUF900: Alpha/beta hy 93.6 0.63 1.4E-05 43.5 10.1 55 188-242 80-143 (233)
156 COG3243 PhaC Poly(3-hydroxyalk 93.6 0.84 1.8E-05 46.8 11.4 104 115-233 106-214 (445)
157 PLN02310 triacylglycerol lipas 93.3 0.086 1.9E-06 53.6 3.9 38 183-220 191-228 (405)
158 COG0627 Predicted esterase [Ge 92.8 0.27 5.8E-06 48.4 6.6 32 202-233 153-184 (316)
159 PLN02162 triacylglycerol lipas 92.6 0.16 3.5E-06 52.5 4.8 34 186-220 263-297 (475)
160 PLN03037 lipase class 3 family 92.6 0.17 3.7E-06 52.8 5.1 58 183-241 300-364 (525)
161 KOG1553 Predicted alpha/beta h 92.4 0.6 1.3E-05 47.0 8.3 75 138-229 261-339 (517)
162 PF02450 LCAT: Lecithin:choles 92.3 0.23 5.1E-06 49.8 5.5 86 135-236 67-160 (389)
163 PLN00413 triacylglycerol lipas 92.2 0.15 3.2E-06 52.8 4.1 31 189-220 273-303 (479)
164 COG4947 Uncharacterized protei 92.2 0.2 4.3E-06 46.0 4.3 59 188-246 88-146 (227)
165 COG1075 LipA Predicted acetylt 92.1 0.35 7.5E-06 47.6 6.4 37 197-233 123-161 (336)
166 PLN02324 triacylglycerol lipas 92.0 0.2 4.3E-06 51.1 4.6 20 201-220 215-234 (415)
167 PLN02571 triacylglycerol lipas 91.8 0.2 4.2E-06 51.2 4.2 37 183-221 210-246 (413)
168 KOG2624 Triglyceride lipase-ch 91.7 0.77 1.7E-05 46.8 8.4 112 117-236 74-199 (403)
169 PF05705 DUF829: Eukaryotic pr 91.7 1.4 3.1E-05 40.4 9.5 82 118-218 1-84 (240)
170 PF07082 DUF1350: Protein of u 91.4 1.6 3.5E-05 41.7 9.8 92 117-224 15-113 (250)
171 PLN02454 triacylglycerol lipas 90.9 0.49 1.1E-05 48.3 6.1 20 202-221 229-248 (414)
172 PLN02934 triacylglycerol lipas 90.9 0.31 6.7E-06 50.9 4.8 30 190-220 311-340 (515)
173 PLN02761 lipase class 3 family 90.8 0.37 8E-06 50.5 5.2 38 183-220 274-313 (527)
174 PLN02408 phospholipase A1 90.6 0.37 8E-06 48.4 4.9 40 202-241 201-246 (365)
175 KOG4569 Predicted lipase [Lipi 90.1 0.49 1.1E-05 46.7 5.2 56 182-241 156-218 (336)
176 KOG3967 Uncharacterized conser 89.5 2.2 4.9E-05 40.5 8.7 101 116-230 101-221 (297)
177 COG2382 Fes Enterochelin ester 89.0 1.3 2.9E-05 43.4 7.1 47 188-234 160-210 (299)
178 KOG3724 Negative regulator of 88.6 1.2 2.7E-05 48.8 7.2 115 122-244 93-229 (973)
179 KOG2183 Prolylcarboxypeptidase 88.2 6.7 0.00014 40.5 11.7 144 76-226 42-192 (492)
180 PLN02802 triacylglycerol lipas 88.0 0.47 1E-05 49.5 3.6 21 201-221 330-350 (509)
181 PLN02719 triacylglycerol lipas 87.6 0.52 1.1E-05 49.3 3.6 38 183-220 279-317 (518)
182 PF11144 DUF2920: Protein of u 87.4 7.2 0.00016 39.9 11.4 111 201-318 184-318 (403)
183 PF00135 COesterase: Carboxyle 87.4 3 6.6E-05 42.0 8.9 124 101-234 107-243 (535)
184 PLN02753 triacylglycerol lipas 87.3 0.59 1.3E-05 49.0 3.8 37 184-220 294-331 (531)
185 PF11187 DUF2974: Protein of u 87.1 1.1 2.3E-05 41.9 5.1 23 201-223 84-106 (224)
186 PLN02847 triacylglycerol lipas 86.4 1.2 2.5E-05 47.6 5.4 25 197-221 247-271 (633)
187 PF03096 Ndr: Ndr family; Int 86.3 11 0.00024 36.8 11.7 95 142-247 51-145 (283)
188 PTZ00472 serine carboxypeptida 86.0 4 8.6E-05 42.1 9.0 109 102-221 62-191 (462)
189 COG4814 Uncharacterized protei 85.5 3 6.5E-05 40.4 7.2 33 188-220 123-155 (288)
190 KOG2931 Differentiation-relate 85.4 8.4 0.00018 38.1 10.3 118 116-245 45-166 (326)
191 KOG3253 Predicted alpha/beta h 84.9 1.6 3.4E-05 46.8 5.5 37 197-233 246-283 (784)
192 KOG2182 Hydrolytic enzymes of 84.2 7.4 0.00016 40.8 9.8 116 107-227 75-198 (514)
193 COG5153 CVT17 Putative lipase 81.5 2.4 5.2E-05 41.9 4.8 27 197-223 272-298 (425)
194 KOG4540 Putative lipase essent 81.5 2.4 5.2E-05 41.9 4.8 27 197-223 272-298 (425)
195 PLN02517 phosphatidylcholine-s 81.1 2.7 5.8E-05 45.0 5.4 76 131-218 154-230 (642)
196 COG4287 PqaA PhoPQ-activated p 80.7 2.1 4.5E-05 43.6 4.2 118 189-314 223-350 (507)
197 COG2819 Predicted hydrolase of 80.6 9.6 0.00021 36.9 8.6 47 188-234 122-170 (264)
198 PF04301 DUF452: Protein of un 80.1 7.3 0.00016 36.4 7.4 115 198-318 54-190 (213)
199 PF07519 Tannase: Tannase and 77.9 40 0.00086 35.0 12.8 118 101-225 15-139 (474)
200 PF10340 DUF2424: Protein of u 77.5 17 0.00038 36.8 9.7 35 184-218 178-212 (374)
201 COG2312 Erythromycin esterase 76.6 3.5 7.6E-05 42.0 4.5 91 132-222 61-162 (405)
202 cd07198 Patatin Patatin-like p 75.7 3.6 7.9E-05 36.0 3.9 35 189-224 15-49 (172)
203 KOG2369 Lecithin:cholesterol a 73.8 8.3 0.00018 40.1 6.4 94 117-222 103-203 (473)
204 KOG2237 Predicted serine prote 73.6 7.4 0.00016 42.0 6.1 44 185-229 531-577 (712)
205 COG3946 VirJ Type IV secretory 72.3 4.7 0.0001 41.4 4.1 67 128-213 268-338 (456)
206 COG4782 Uncharacterized protei 72.0 20 0.00044 36.3 8.5 54 188-241 178-239 (377)
207 cd07225 Pat_PNPLA6_PNPLA7 Pata 70.9 5 0.00011 39.2 3.9 34 188-222 31-64 (306)
208 PRK10279 hypothetical protein; 69.6 5 0.00011 39.2 3.6 34 189-223 22-55 (300)
209 cd07207 Pat_ExoU_VipD_like Exo 69.6 6 0.00013 34.9 3.9 34 189-223 16-49 (194)
210 COG1770 PtrB Protease II [Amin 68.4 11 0.00024 40.7 6.1 104 188-308 512-624 (682)
211 PF01083 Cutinase: Cutinase; 67.4 8.9 0.00019 34.3 4.5 93 118-221 5-101 (179)
212 smart00827 PKS_AT Acyl transfe 65.8 7.4 0.00016 36.6 3.9 35 188-223 70-104 (298)
213 cd07205 Pat_PNPLA6_PNPLA7_NTE1 65.4 9.1 0.0002 33.4 4.1 35 188-223 16-50 (175)
214 PF05576 Peptidase_S37: PS-10 64.6 37 0.00081 35.1 8.7 143 75-236 27-170 (448)
215 COG3150 Predicted esterase [Ge 64.2 8.8 0.00019 35.2 3.8 27 197-223 55-81 (191)
216 COG1505 Serine proteases of th 64.1 4.8 0.0001 43.1 2.4 123 184-320 481-607 (648)
217 KOG1516 Carboxylesterase and r 62.1 27 0.00058 36.0 7.4 115 98-220 92-214 (545)
218 PF00326 Peptidase_S9: Prolyl 59.9 18 0.00039 32.0 5.1 42 117-160 145-188 (213)
219 cd07227 Pat_Fungal_NTE1 Fungal 59.5 11 0.00024 36.2 3.9 33 189-222 27-59 (269)
220 TIGR03131 malonate_mdcH malona 59.4 11 0.00024 35.6 3.9 35 188-223 64-98 (295)
221 PF00698 Acyl_transf_1: Acyl t 59.1 9.5 0.00021 36.7 3.4 35 188-223 72-106 (318)
222 COG1752 RssA Predicted esteras 58.8 11 0.00024 36.3 3.8 38 184-223 24-61 (306)
223 cd07209 Pat_hypo_Ecoli_Z1214_l 58.1 19 0.00041 32.9 5.0 38 184-223 11-48 (215)
224 cd07228 Pat_NTE_like_bacteria 57.5 24 0.00051 31.0 5.3 39 183-223 12-50 (175)
225 cd07210 Pat_hypo_W_succinogene 56.5 22 0.00048 32.8 5.2 38 184-223 13-50 (221)
226 KOG3847 Phospholipase A2 (plat 55.0 6.9 0.00015 39.2 1.6 37 201-237 241-277 (399)
227 TIGR00128 fabD malonyl CoA-acy 54.4 15 0.00032 34.3 3.8 34 189-223 71-105 (290)
228 COG2272 PnbA Carboxylesterase 53.4 1.3E+02 0.0028 31.7 10.6 37 182-218 156-197 (491)
229 cd07231 Pat_SDP1-like Sugar-De 51.9 43 0.00092 33.4 6.6 37 185-223 82-118 (323)
230 cd07208 Pat_hypo_Ecoli_yjju_li 51.1 28 0.0006 32.6 5.0 39 184-224 11-50 (266)
231 KOG4372 Predicted alpha/beta h 51.1 13 0.00028 38.1 2.8 85 119-220 83-169 (405)
232 PF03283 PAE: Pectinacetyleste 50.3 20 0.00044 35.9 4.2 36 188-224 141-183 (361)
233 PLN02606 palmitoyl-protein thi 46.2 98 0.0021 30.7 8.0 101 115-233 25-129 (306)
234 cd07224 Pat_like Patatin-like 46.2 26 0.00055 32.7 3.9 35 188-223 15-51 (233)
235 COG1506 DAP2 Dipeptidyl aminop 45.2 39 0.00084 36.1 5.5 43 116-160 551-595 (620)
236 PF00450 Peptidase_S10: Serine 43.8 1.5E+02 0.0034 28.8 9.2 110 101-220 24-155 (415)
237 KOG2541 Palmitoyl protein thio 43.8 2.7E+02 0.0059 27.4 10.4 90 117-224 24-115 (296)
238 cd07211 Pat_PNPLA8 Patatin-lik 43.7 21 0.00046 34.3 3.0 37 183-221 20-61 (308)
239 cd07230 Pat_TGL4-5_like Triacy 43.5 31 0.00068 35.3 4.4 40 184-225 86-125 (421)
240 cd07212 Pat_PNPLA9 Patatin-lik 42.6 43 0.00094 32.7 5.0 34 189-222 16-53 (312)
241 COG4671 Predicted glycosyl tra 42.6 1.2E+02 0.0026 31.0 8.0 47 110-157 212-261 (400)
242 COG0548 ArgB Acetylglutamate k 40.3 76 0.0017 30.7 6.2 21 188-209 85-105 (265)
243 TIGR03712 acc_sec_asp2 accesso 40.0 1.1E+02 0.0024 32.3 7.7 36 188-224 343-381 (511)
244 PRK14058 acetylglutamate/acety 38.9 74 0.0016 30.2 5.9 23 187-210 82-104 (268)
245 PF08386 Abhydrolase_4: TAP-li 38.8 22 0.00048 28.8 2.0 26 294-319 35-60 (103)
246 PF06259 Abhydrolase_8: Alpha/ 37.6 60 0.0013 29.4 4.8 47 187-233 94-141 (177)
247 PF05277 DUF726: Protein of un 37.6 32 0.00069 34.5 3.2 46 188-233 206-257 (345)
248 cd01819 Patatin_and_cPLA2 Pata 35.8 44 0.00095 28.9 3.5 29 190-219 16-46 (155)
249 PLN02633 palmitoyl protein thi 34.6 2.2E+02 0.0048 28.3 8.5 101 115-233 24-128 (314)
250 cd07232 Pat_PLPL Patain-like p 34.4 61 0.0013 33.0 4.8 39 184-224 80-118 (407)
251 cd07229 Pat_TGL3_like Triacylg 33.9 38 0.00083 34.5 3.2 33 191-224 102-134 (391)
252 cd07222 Pat_PNPLA4 Patatin-lik 33.8 44 0.00095 31.4 3.4 32 189-221 16-51 (246)
253 PRK04923 ribose-phosphate pyro 33.5 1.7E+02 0.0038 28.8 7.6 103 117-219 54-185 (319)
254 PF02089 Palm_thioest: Palmito 33.5 52 0.0011 32.1 3.9 104 116-233 5-113 (279)
255 KOG1551 Uncharacterized conser 33.1 22 0.00048 35.0 1.3 50 207-256 76-143 (371)
256 PF00561 Abhydrolase_1: alpha/ 32.5 34 0.00073 29.4 2.3 23 295-317 177-199 (230)
257 cd07204 Pat_PNPLA_like Patatin 32.4 56 0.0012 30.6 3.9 33 190-223 17-53 (243)
258 PF01734 Patatin: Patatin-like 32.3 46 0.00099 27.7 3.0 26 197-222 23-48 (204)
259 PF10081 Abhydrolase_9: Alpha/ 32.2 73 0.0016 31.3 4.7 117 179-309 88-210 (289)
260 TIGR01251 ribP_PPkin ribose-ph 30.6 2.2E+02 0.0047 27.7 7.8 105 117-222 48-181 (308)
261 cd07218 Pat_iPLA2 Calcium-inde 30.6 58 0.0013 30.7 3.7 34 189-223 17-52 (245)
262 TIGR01499 folC folylpolyglutam 30.5 95 0.0021 30.8 5.3 35 121-157 20-55 (397)
263 PRK02458 ribose-phosphate pyro 30.1 2E+02 0.0044 28.4 7.5 76 117-207 57-134 (323)
264 PF06377 Adipokin_hormo: Adipo 29.2 23 0.00051 25.7 0.6 8 31-38 4-11 (48)
265 PF11288 DUF3089: Protein of u 28.7 75 0.0016 29.6 4.0 34 188-221 82-115 (207)
266 cd03785 GT1_MurG MurG is an N- 27.3 74 0.0016 30.0 3.8 35 120-156 2-37 (350)
267 cd07206 Pat_TGL3-4-5_SDP1 Tria 26.9 1E+02 0.0023 30.3 4.8 26 197-222 93-118 (298)
268 cd07213 Pat17_PNPLA8_PNPLA9_li 26.3 1.1E+02 0.0024 29.2 4.8 38 183-222 14-55 (288)
269 PLN02369 ribose-phosphate pyro 26.0 3E+02 0.0066 26.8 7.8 79 117-210 39-119 (302)
270 PF08237 PE-PPE: PE-PPE domain 25.4 1.2E+02 0.0027 28.3 4.8 22 199-220 46-67 (225)
271 KOG2214 Predicted esterase of 25.4 49 0.0011 35.0 2.3 28 197-224 198-225 (543)
272 PHA01735 hypothetical protein 25.4 78 0.0017 24.8 2.9 33 178-211 26-58 (76)
273 COG0285 FolC Folylpolyglutamat 25.3 79 0.0017 32.6 3.8 35 121-157 46-81 (427)
274 PRK01259 ribose-phosphate pyro 25.3 2.4E+02 0.0052 27.6 7.0 100 117-217 48-174 (309)
275 TIGR02816 pfaB_fam PfaB family 24.2 87 0.0019 33.3 3.9 35 190-224 254-288 (538)
276 PRK03092 ribose-phosphate pyro 24.0 4.8E+02 0.01 25.4 8.8 106 117-222 37-170 (304)
277 KOG2614 Kynurenine 3-monooxyge 23.8 1.7E+02 0.0038 30.2 5.8 73 120-209 5-80 (420)
278 COG2072 TrkA Predicted flavopr 22.5 1.9E+02 0.0042 29.5 6.0 64 74-149 133-201 (443)
279 PRK02269 ribose-phosphate pyro 22.1 3.2E+02 0.007 26.9 7.2 78 117-209 53-132 (320)
280 cd07220 Pat_PNPLA2 Patatin-lik 21.9 1.1E+02 0.0023 29.1 3.8 34 189-223 21-58 (249)
281 PRK12446 undecaprenyldiphospho 21.9 3.7E+02 0.0079 26.4 7.6 35 120-155 4-38 (352)
282 PRK00934 ribose-phosphate pyro 21.6 4E+02 0.0088 25.6 7.7 99 117-217 47-170 (285)
283 cd07217 Pat17_PNPLA8_PNPLA9_li 20.2 71 0.0015 31.8 2.2 18 204-221 44-61 (344)
284 cd07199 Pat17_PNPLA8_PNPLA9_li 20.0 1.6E+02 0.0034 27.4 4.4 38 183-221 11-54 (258)
No 1
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=100.00 E-value=2e-80 Score=601.43 Aligned_cols=287 Identities=44% Similarity=0.699 Sum_probs=264.5
Q ss_pred CCCccCCCCCChHHHHHHHHH---hhcccccccCCCCCCCCCceeeeeeccCeEEEeeeeeCCCcccccCCCCcccccee
Q 019962 28 PPFFSRGWGGSKLELLERLIK---QLFPEIEGQNWPPSLIQPIWRTIWETQTAVLREGVFRTPCDEQLMSALPPESHNAR 104 (333)
Q Consensus 28 ~~fF~~GwG~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~F~Sp~~~~~p~~lp~~s~~a~ 104 (333)
||||++||||| |+++++++ .+.+|..|++++++++++.|.+++++++++++||+|.|||+.++|++||.||++||
T Consensus 1 tkfF~~GWG~~--~~l~~l~~~~~~~~~r~~~~~~~~~~~~~~~~k~~~~~~~~~~eG~F~SP~~~~~~~~lP~es~~a~ 78 (348)
T PF09752_consen 1 TKFFSDGWGDP--EMLKRLFEFRKLISNREKCQSLVPPDIPVVIDKVEEQSDCKIREGEFRSPLAFYLPGLLPEESRTAR 78 (348)
T ss_pred CCCccCCCCCH--HHHHHHHHHHHHHhccccccccCCCCCCcceeeccccCceEEEEeEeCCchhhhccccCChhHhheE
Confidence 79999999998 89999877 46778999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCCC-CCCCceEEEEecCCCChhHHHhhhh-chHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhh
Q 019962 105 VAFLAPKCV-PPQKMACVVHLAGTGDHTFERRLRL-GGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRA 182 (333)
Q Consensus 105 ~~~~~p~~~-~~~~~v~viH~aG~Gd~~~~~r~~l-a~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~ 182 (333)
||+++|++| .+.||+| ||+||||||+||+|+.+ |+||+++||+++++++||||+|||++|.++.+.+|||+|+||++
T Consensus 79 ~~~~~P~~~~~~~rp~~-IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~ 157 (348)
T PF09752_consen 79 FQLLLPKRWDSPYRPVC-IHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRA 157 (348)
T ss_pred EEEEECCccccCCCceE-EEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhH
Confidence 999999999 4568887 79999999999999875 99999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCccccccccccccCccHHHHHHHHHhh
Q 019962 183 TIEEARCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAVVAFCEGILKHGTAWEALREELAAK 262 (333)
Q Consensus 183 ~i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta~~vfteGvl~~~~~w~~L~~~l~~~ 262 (333)
+|+|+|+|++||+ ++|++++||+|+||||+||+|+|+++|++++++||+||+||+++||+|+|+.+++|+.|++++...
T Consensus 158 ~i~E~~~Ll~Wl~-~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~~~ 236 (348)
T PF09752_consen 158 TILESRALLHWLE-REGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQFEDT 236 (348)
T ss_pred HHHHHHHHHHHHH-hcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhccc
Confidence 9999999999999 779999999999999999999999999999999999999999999999999999999999983111
Q ss_pred h---------------------hcCCHHHHHHHHHHhh-ccCCCCCCCCCCCCCeEEEEEecCCccccchhhHHhhhc
Q 019962 263 K---------------------VAMTLEEVRERMRNVL-SLTDVTRFPIPKIPNAVIFVAATVSTVFDYHHEEVLKMD 318 (333)
Q Consensus 263 ~---------------------~~lt~~~a~~rl~~~l-~~t~l~nf~~p~dp~~ilvV~g~~D~yVP~~~~~~L~~~ 318 (333)
. ....+.|+..+|..+| ++||+.||++|+||+++++|+|++|+|||++++..|++-
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~ 314 (348)
T PF09752_consen 237 VYEEEISDIPAQNKSLPLDSMEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEI 314 (348)
T ss_pred chhhhhcccccCcccccchhhccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEechhhcchHHHh
Confidence 0 0112245555666666 999999999999999999999999999999999988763
No 2
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=1.5e-71 Score=520.05 Aligned_cols=310 Identities=49% Similarity=0.817 Sum_probs=286.2
Q ss_pred eeeeccchhhHHHHHHHHhhhccccCCCCccCCCCCChHHHHHHHHHhhcc-cccccCCCCCCCCCceeeeeeccCeEEE
Q 019962 2 VTVNLGMLHYVLDHVYGAFMHRTKISPPFFSRGWGGSKLELLERLIKQLFP-EIEGQNWPPSLIQPIWRTIWETQTAVLR 80 (333)
Q Consensus 2 ~~~~~~~~~~~ld~~~~~~~~r~~~~~~fF~~GwG~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 80 (333)
||+.+|++||+.||+|+++++ .++.++||++|||+|++|.+++|.+.+++ +...|+|||+-+.|+|+++||+..++.+
T Consensus 1 vtt~l~~L~~~~~Hi~~~F~~-t~m~~~~Fsr~WG~Pnl~~~~~~~qR~~~~e~~~~n~~~~L~~~v~~~~~~tKt~T~~ 79 (371)
T KOG1551|consen 1 VTTKLGMLHYVIDHIYGAFMH-TKMTPPFFSRGWGGPNLELLERMVQRLFPLEVQGQNWPPPLVRPVWRTVWETKTATLR 79 (371)
T ss_pred CcccccchHHHHHHHHHHHHH-hhcCcchhccCCCCCCHHHHHHHHHHhhhHHHhcccCCCccCcchheeeeecccceeh
Confidence 578999999999999999999 88999999999999999999999998765 7788999999889999999999999999
Q ss_pred eeeeeCCCcccccCCCCccccceeEEEeecCCCCCCCceEEEEecCCCChhHHHhhhhchHHHhcCccEEEeecccCCCC
Q 019962 81 EGVFRTPCDEQLMSALPPESHNARVAFLAPKCVPPQKMACVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQR 160 (333)
Q Consensus 81 ~g~F~Sp~~~~~p~~lp~~s~~a~~~~~~p~~~~~~~~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~R 160 (333)
||.|.||+++..|..||.|+++||++.++||+- -++| ||.||+|||.|.+|..+.+|++++|++++++++||||+|
T Consensus 80 EG~fasp~a~~~p~~mP~~~~~A~~~~liPQK~---~~KO-G~~a~tgdh~y~rr~~L~~p~~k~~i~tmvle~pfYgqr 155 (371)
T KOG1551|consen 80 EGVFASPAASNWPKPMPPESRTARVAWLIPQKM---ADLC-LSWALTGDHVYTRRLVLSKPINKREIATMVLEKPFYGQR 155 (371)
T ss_pred hhhhcCchhhhCccCCCCcccceeeeeecccCc---CCee-EEEeecCCceeEeeeeecCchhhhcchheeeeccccccc
Confidence 999999999999999999999999999999873 3555 999999999999988899999999999999999999999
Q ss_pred CCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCcccc
Q 019962 161 RPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAVVA 240 (333)
Q Consensus 161 kP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta~~v 240 (333)
+|+.|..+.+.+|+|+|.||+|+|+|++.+++|-. +.|+++++|+|.||||.||+++.+++++||+++||++|++|+++
T Consensus 156 ~p~~q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~-~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asvs 234 (371)
T KOG1551|consen 156 VPEEQIIHMLEYVTDLFKMGRATIQEFVKLFTWSS-ADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKASVS 234 (371)
T ss_pred CCHHHHHHHHHHHHHHHHhhHHHHHHHHHhccccc-ccCcccceeeeeecccHHHHhhcccCCCCccccccccccccchh
Confidence 99999999999999999999999999999999965 89999999999999999999999999999999999999999999
Q ss_pred cccccccc--C--------ccHHHHHHHHHhhhhc--------CCHHHHHHHHHHhh-ccCCCCCCCCCCCCCeEEEEEe
Q 019962 241 FCEGILKH--G--------TAWEALREELAAKKVA--------MTLEEVRERMRNVL-SLTDVTRFPIPKIPNAVIFVAA 301 (333)
Q Consensus 241 fteGvl~~--~--------~~w~~L~~~l~~~~~~--------lt~~~a~~rl~~~l-~~t~l~nf~~p~dp~~ilvV~g 301 (333)
+|||++++ + ++|..+.+.+..++.. =+++|++.+|+++| ++||++|||.|+||++|++|+|
T Consensus 235 ~teg~l~~~~s~~~~~~~~t~~~~~~~r~p~Q~~~~~~~~~srn~~~E~~~~Mr~vmd~~T~v~~fp~Pvdpsl~ivv~A 314 (371)
T KOG1551|consen 235 ATEGLLLQDTSKMKRFNQTTNKSGYTSRNPAQSYHLLSKEQSRNSRKESLIFMRGVMDECTHVANFPVPVDPSLIIVVQA 314 (371)
T ss_pred hhhhhhhhhhHHHHhhccCcchhhhhhhCchhhHHHHHHHhhhcchHHHHHHHHHHHHhhchhhcCCCCCCCCeEEEEEe
Confidence 99999987 3 5665555433222221 23478999999999 8999999999999999999999
Q ss_pred cCCccccchhhHHhhh
Q 019962 302 TVSTVFDYHHEEVLKM 317 (333)
Q Consensus 302 ~~D~yVP~~~~~~L~~ 317 (333)
++|+|||++++..||+
T Consensus 315 ~~D~Yipr~gv~~lQ~ 330 (371)
T KOG1551|consen 315 KEDAYIPRTGVRSLQE 330 (371)
T ss_pred cCCccccccCcHHHHH
Confidence 9999999999999986
No 3
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.52 E-value=1.1e-13 Score=128.14 Aligned_cols=178 Identities=19% Similarity=0.218 Sum_probs=117.0
Q ss_pred CCceEEEEecCCCChhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHH
Q 019962 116 QKMACVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLE 195 (333)
Q Consensus 116 ~~~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~ 195 (333)
.+.|++|| |+-.+.=.- +.|++-|.++||.|..+..|+||--+.. -..... -|+ ..++-...+.|.
T Consensus 15 ~~AVLllH--GFTGt~~Dv-r~Lgr~L~e~GyTv~aP~ypGHG~~~e~-fl~t~~---~DW-------~~~v~d~Y~~L~ 80 (243)
T COG1647 15 NRAVLLLH--GFTGTPRDV-RMLGRYLNENGYTVYAPRYPGHGTLPED-FLKTTP---RDW-------WEDVEDGYRDLK 80 (243)
T ss_pred CEEEEEEe--ccCCCcHHH-HHHHHHHHHCCceEecCCCCCCCCCHHH-HhcCCH---HHH-------HHHHHHHHHHHH
Confidence 46666777 765444332 3699999999999999999999976322 111111 121 345567778887
Q ss_pred HhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCc--cccccccccccCccHHH--------HHHHHH-hhhh
Q 019962 196 WEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSA--VVAFCEGILKHGTAWEA--------LREELA-AKKV 264 (333)
Q Consensus 196 ~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta--~~vfteGvl~~~~~w~~--------L~~~l~-~~~~ 264 (333)
+.|++.|.|+|.||||.+|..+|...| +.+.+||++|... .....+|++.+.-+.++ .++++. ++..
T Consensus 81 -~~gy~eI~v~GlSmGGv~alkla~~~p-~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~~~~ 158 (243)
T COG1647 81 -EAGYDEIAVVGLSMGGVFALKLAYHYP-PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSYKDT 158 (243)
T ss_pred -HcCCCeEEEEeecchhHHHHHHHhhCC-ccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHHHHhhcc
Confidence 799999999999999999999999999 8889998887654 44557888876433322 222221 1100
Q ss_pred cCCHHHHHHHHHHhh--ccCCCCCCCCCCCCCeEEEEEecCCccccchhhHHhhh
Q 019962 265 AMTLEEVRERMRNVL--SLTDVTRFPIPKIPNAVIFVAATVSTVFDYHHEEVLKM 317 (333)
Q Consensus 265 ~lt~~~a~~rl~~~l--~~t~l~nf~~p~dp~~ilvV~g~~D~yVP~~~~~~L~~ 317 (333)
-......+..++ ...++ .....| +++|+|++|.+||.+++..+.+
T Consensus 159 ---~~~~~~~~~~~i~~~~~~~---~~I~~p--t~vvq~~~D~mv~~~sA~~Iy~ 205 (243)
T COG1647 159 ---PMTTTAQLKKLIKDARRSL---DKIYSP--TLVVQGRQDEMVPAESANFIYD 205 (243)
T ss_pred ---hHHHHHHHHHHHHHHHhhh---hhcccc--hhheecccCCCCCHHHHHHHHH
Confidence 011112222222 12222 333455 8999999999999999987654
No 4
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.48 E-value=1.1e-12 Score=131.30 Aligned_cols=189 Identities=14% Similarity=0.147 Sum_probs=106.2
Q ss_pred EeecCCCCCCCceEEEEecCCCC--hhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhH
Q 019962 107 FLAPKCVPPQKMACVVHLAGTGD--HTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATI 184 (333)
Q Consensus 107 ~~~p~~~~~~~~v~viH~aG~Gd--~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i 184 (333)
+..|+. .+.+|++++| +|.+. ..++. .++..|+++||+|+.+|+|++|.+..... . .|...
T Consensus 185 l~~P~~-~~~~P~Vli~-gG~~~~~~~~~~--~~~~~La~~Gy~vl~~D~pG~G~s~~~~~--~-----~d~~~------ 247 (414)
T PRK05077 185 LHLPKG-DGPFPTVLVC-GGLDSLQTDYYR--LFRDYLAPRGIAMLTIDMPSVGFSSKWKL--T-----QDSSL------ 247 (414)
T ss_pred EEECCC-CCCccEEEEe-CCcccchhhhHH--HHHHHHHhCCCEEEEECCCCCCCCCCCCc--c-----ccHHH------
Confidence 344542 2345666666 34443 23443 57788999999999999999998732210 0 11111
Q ss_pred HHHHHHHHHHHHhc--CCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCcccccccc-ccccCcc--HHHHHHHH
Q 019962 185 EEARCLLHWLEWEA--GFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAVVAFCEG-ILKHGTA--WEALREEL 259 (333)
Q Consensus 185 ~E~r~ll~wl~~~~--g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta~~vfteG-vl~~~~~--w~~L~~~l 259 (333)
....+++|+.+.. +..+|+++|+||||++|..+|+.+|+.+..+.++++... ..++.- .....+. .+.+...+
T Consensus 248 -~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~-~~~~~~~~~~~~p~~~~~~la~~l 325 (414)
T PRK05077 248 -LHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVH-TLLTDPKRQQQVPEMYLDVLASRL 325 (414)
T ss_pred -HHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccc-hhhcchhhhhhchHHHHHHHHHHh
Confidence 1257889998322 458999999999999999999999987777777765432 111111 0000000 01111111
Q ss_pred HhhhhcCCHHHHHHHHHHhh-ccCCCCCCCCCCCCCeEEEEEecCCccccchhhHHhhhcc
Q 019962 260 AAKKVAMTLEEVRERMRNVL-SLTDVTRFPIPKIPNAVIFVAATVSTVFDYHHEEVLKMDS 319 (333)
Q Consensus 260 ~~~~~~lt~~~a~~rl~~~l-~~t~l~nf~~p~dp~~ilvV~g~~D~yVP~~~~~~L~~~~ 319 (333)
.....+.+.....+.... ....+ +.... +-++++|+|++|.++|.+.++.|.+..
T Consensus 326 --g~~~~~~~~l~~~l~~~sl~~~~~--l~~~i-~~PvLiI~G~~D~ivP~~~a~~l~~~~ 381 (414)
T PRK05077 326 --GMHDASDEALRVELNRYSLKVQGL--LGRRC-PTPMLSGYWKNDPFSPEEDSRLIASSS 381 (414)
T ss_pred --CCCCCChHHHHHHhhhccchhhhh--hccCC-CCcEEEEecCCCCCCCHHHHHHHHHhC
Confidence 000112222222222211 11111 11111 224999999999999999999877644
No 5
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.46 E-value=4.3e-13 Score=123.26 Aligned_cols=103 Identities=19% Similarity=0.353 Sum_probs=74.9
Q ss_pred CceEEEEecCCCC--hhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHH
Q 019962 117 KMACVVHLAGTGD--HTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWL 194 (333)
Q Consensus 117 ~~v~viH~aG~Gd--~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl 194 (333)
+++++|| |+|. ..|....+...+++++||+|+.++.|+||.+.++...... + ...++.+...+
T Consensus 31 ~~ivllH--G~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~-----~--------~~~~~~l~~~l 95 (282)
T TIGR03343 31 EAVIMLH--GGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQR-----G--------LVNARAVKGLM 95 (282)
T ss_pred CeEEEEC--CCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccc-----c--------chhHHHHHHHH
Confidence 5666677 5553 3343333455678888999999999999999654211100 0 01235566777
Q ss_pred HHhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCC
Q 019962 195 EWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPH 235 (333)
Q Consensus 195 ~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ 235 (333)
+ ..+.++++++|.||||.+|..+|..+|+.+..+.++++.
T Consensus 96 ~-~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 135 (282)
T TIGR03343 96 D-ALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPG 135 (282)
T ss_pred H-HcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCC
Confidence 7 788999999999999999999999999999888888753
No 6
>PRK10566 esterase; Provisional
Probab=99.46 E-value=2.5e-12 Score=117.01 Aligned_cols=187 Identities=16% Similarity=0.143 Sum_probs=105.7
Q ss_pred eecCCCC-CC-CceEEEEecCCCChhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHH
Q 019962 108 LAPKCVP-PQ-KMACVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIE 185 (333)
Q Consensus 108 ~~p~~~~-~~-~~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~ 185 (333)
+.|.... +. ++++++| |.+.+.-. ...+++.|.++||+|+.++.|+||.|.+..... ...++.-+....+.
T Consensus 17 ~~p~~~~~~~~p~vv~~H--G~~~~~~~-~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~----~~~~~~~~~~~~~~ 89 (249)
T PRK10566 17 AFPAGQRDTPLPTVFFYH--GFTSSKLV-YSYFAVALAQAGFRVIMPDAPMHGARFSGDEAR----RLNHFWQILLQNMQ 89 (249)
T ss_pred EcCCCCCCCCCCEEEEeC--CCCcccch-HHHHHHHHHhCCCEEEEecCCcccccCCCcccc----chhhHHHHHHHHHH
Confidence 4565432 22 3444555 66644321 125788999999999999999999874322111 11122222223466
Q ss_pred HHHHHHHHHHHhcC---CCeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCccccccccccccCccHHHHHHHHHhh
Q 019962 186 EARCLLHWLEWEAG---FGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAVVAFCEGILKHGTAWEALREELAAK 262 (333)
Q Consensus 186 E~r~ll~wl~~~~g---~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta~~vfteGvl~~~~~w~~L~~~l~~~ 262 (333)
|...+++|+. +.+ .++|+|+|.||||++|..+++..|+..+.+.++++. .+ +.+.+.+...
T Consensus 90 ~~~~~~~~l~-~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~----~~-----------~~~~~~~~~~ 153 (249)
T PRK10566 90 EFPTLRAAIR-EEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSG----YF-----------TSLARTLFPP 153 (249)
T ss_pred HHHHHHHHHH-hcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcH----HH-----------HHHHHHhccc
Confidence 7788899998 443 479999999999999999999999866665544311 01 0011100000
Q ss_pred ---hhcCCHHHHHHHHHHhhccCCCCCCCCCCCCCeEEEEEecCCccccchhhHHhhhc
Q 019962 263 ---KVAMTLEEVRERMRNVLSLTDVTRFPIPKIPNAVIFVAATVSTVFDYHHEEVLKMD 318 (333)
Q Consensus 263 ---~~~lt~~~a~~rl~~~l~~t~l~nf~~p~dp~~ilvV~g~~D~yVP~~~~~~L~~~ 318 (333)
....+.....+.+....... +.++.....+.++++|+|++|.++|.+.++.|.+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~ 211 (249)
T PRK10566 154 LIPETAAQQAEFNNIVAPLAEWE-VTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQA 211 (249)
T ss_pred ccccccccHHHHHHHHHHHhhcC-hhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHH
Confidence 00000111111111111211 11111112123599999999999999999988763
No 7
>PHA02857 monoglyceride lipase; Provisional
Probab=99.43 E-value=2.4e-12 Score=118.85 Aligned_cols=105 Identities=13% Similarity=0.075 Sum_probs=75.9
Q ss_pred CceEEEEecCCCChh-HHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHH
Q 019962 117 KMACVVHLAGTGDHT-FERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLE 195 (333)
Q Consensus 117 ~~v~viH~aG~Gd~~-~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~ 195 (333)
++++ +.+||.+++. +|. .++..|.+.||+++.+|.|+||++.+... + .... ...+.|....+++++
T Consensus 25 ~~~v-~llHG~~~~~~~~~--~~~~~l~~~g~~via~D~~G~G~S~~~~~--~-~~~~-------~~~~~d~~~~l~~~~ 91 (276)
T PHA02857 25 KALV-FISHGAGEHSGRYE--ELAENISSLGILVFSHDHIGHGRSNGEKM--M-IDDF-------GVYVRDVVQHVVTIK 91 (276)
T ss_pred CEEE-EEeCCCccccchHH--HHHHHHHhCCCEEEEccCCCCCCCCCccC--C-cCCH-------HHHHHHHHHHHHHHH
Confidence 3443 3334777554 443 58889999999999999999999854321 1 1111 113456677777776
Q ss_pred HhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCC
Q 019962 196 WEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSP 234 (333)
Q Consensus 196 ~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~ 234 (333)
++.+..+++|+|.||||.+|..+|..+|+.+..+.+++|
T Consensus 92 ~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p 130 (276)
T PHA02857 92 STYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSP 130 (276)
T ss_pred hhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEecc
Confidence 445567899999999999999999999998888888876
No 8
>PLN02965 Probable pheophorbidase
Probab=99.43 E-value=3.6e-12 Score=117.15 Aligned_cols=99 Identities=14% Similarity=0.069 Sum_probs=72.7
Q ss_pred ceEEEEecCCCChh-HHHhhhhchHHHhcCccEEEeecccCCCCC-CCcccCcccchhhhHHHhhhhhHHHHHHHHHHHH
Q 019962 118 MACVVHLAGTGDHT-FERRLRLGGPLLKENIATMVLESPFYGQRR-PLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLE 195 (333)
Q Consensus 118 ~v~viH~aG~Gd~~-~~~r~~la~pL~~~Gi~~ill~~Py~G~Rk-P~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~ 195 (333)
.+++|| |+|.+. .|. .++..|.+.||+|+.+++|+||.+. |....++....+ ..+.+.++
T Consensus 5 ~vvllH--G~~~~~~~w~--~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a--------------~dl~~~l~ 66 (255)
T PLN02965 5 HFVFVH--GASHGAWCWY--KLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYN--------------RPLFALLS 66 (255)
T ss_pred EEEEEC--CCCCCcCcHH--HHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHH--------------HHHHHHHH
Confidence 445556 666333 344 5677787889999999999999883 433222211122 45677777
Q ss_pred HhcCC-CeeeEeeechhHHHHHHhhhcCCCceeeecccCCC
Q 019962 196 WEAGF-GKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPH 235 (333)
Q Consensus 196 ~~~g~-~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ 235 (333)
+.+. .++.++|+||||.+|..+|..+|+.+..++++++.
T Consensus 67 -~l~~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~ 106 (255)
T PLN02965 67 -DLPPDHKVILVGHSIGGGSVTEALCKFTDKISMAIYVAAA 106 (255)
T ss_pred -hcCCCCCEEEEecCcchHHHHHHHHhCchheeEEEEEccc
Confidence 6776 49999999999999999999999999999988754
No 9
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.42 E-value=2.5e-12 Score=119.35 Aligned_cols=101 Identities=14% Similarity=0.145 Sum_probs=71.6
Q ss_pred CCceEEEEecCCCCh-hHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHH
Q 019962 116 QKMACVVHLAGTGDH-TFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWL 194 (333)
Q Consensus 116 ~~~v~viH~aG~Gd~-~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl 194 (333)
.+|+++|| |+|++ ..|+ .+...|. .+|+|+.+|.|.||++..+...++....+ +.+.+.+
T Consensus 25 ~~plvllH--G~~~~~~~w~--~~~~~L~-~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~--------------~~~~~~i 85 (276)
T TIGR02240 25 LTPLLIFN--GIGANLELVF--PFIEALD-PDLEVIAFDVPGVGGSSTPRHPYRFPGLA--------------KLAARML 85 (276)
T ss_pred CCcEEEEe--CCCcchHHHH--HHHHHhc-cCceEEEECCCCCCCCCCCCCcCcHHHHH--------------HHHHHHH
Confidence 46888888 66644 3343 4444554 47999999999999995433211111111 3344455
Q ss_pred HHhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCCC
Q 019962 195 EWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHS 236 (333)
Q Consensus 195 ~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~t 236 (333)
+ ..+.+++.|+|+||||.+|..+|..+|+.+..+.++++..
T Consensus 86 ~-~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~ 126 (276)
T TIGR02240 86 D-YLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAA 126 (276)
T ss_pred H-HhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCC
Confidence 5 5678899999999999999999999999999999988644
No 10
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.42 E-value=3e-12 Score=113.55 Aligned_cols=98 Identities=12% Similarity=0.170 Sum_probs=68.9
Q ss_pred CceEEEEecCCCCh-hHHHhhhhchHHHhcCccEEEeecccCCCCCCC-cccCcccchhhhHHHhhhhhHHHHHHHHHHH
Q 019962 117 KMACVVHLAGTGDH-TFERRLRLGGPLLKENIATMVLESPFYGQRRPL-LQRGAKLLCVSDLLLLGRATIEEARCLLHWL 194 (333)
Q Consensus 117 ~~v~viH~aG~Gd~-~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~-~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl 194 (333)
++++++| |++.+ .+|. ..+. .+.+||+++.+++|+||.+..+ ...++.... ++.+.+++
T Consensus 14 ~~iv~lh--G~~~~~~~~~--~~~~-~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~--------------~~~~~~~i 74 (257)
T TIGR03611 14 PVVVLSS--GLGGSGSYWA--PQLD-VLTQRFHVVTYDHRGTGRSPGELPPGYSIAHM--------------ADDVLQLL 74 (257)
T ss_pred CEEEEEc--CCCcchhHHH--HHHH-HHHhccEEEEEcCCCCCCCCCCCcccCCHHHH--------------HHHHHHHH
Confidence 4556667 66644 3444 3333 3456899999999999988432 221211111 25566677
Q ss_pred HHhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCC
Q 019962 195 EWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSP 234 (333)
Q Consensus 195 ~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~ 234 (333)
+ ..+.++++++|.||||.+|..+|..+|+.+..+.++++
T Consensus 75 ~-~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~ 113 (257)
T TIGR03611 75 D-ALNIERFHFVGHALGGLIGLQLALRYPERLLSLVLINA 113 (257)
T ss_pred H-HhCCCcEEEEEechhHHHHHHHHHHChHHhHHheeecC
Confidence 6 67889999999999999999999999988888877764
No 11
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.41 E-value=5.8e-12 Score=117.73 Aligned_cols=104 Identities=15% Similarity=0.074 Sum_probs=74.7
Q ss_pred CceEEEEecCCCChhHHHhhhhchHHHhcCccEEEeecccCCCCCCC-cccC--cccchhhhHHHhhhhhHHHHHHHHHH
Q 019962 117 KMACVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQRRPL-LQRG--AKLLCVSDLLLLGRATIEEARCLLHW 193 (333)
Q Consensus 117 ~~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~-~q~~--s~l~~vsd~~~~g~~~i~E~r~ll~w 193 (333)
+|+++|| |++.+.... +.+...|.+. ++++.+++|+||.+..+ .+.. ....+..| -+..+.++
T Consensus 30 ~~vlllH--G~~~~~~~w-~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~----------~a~~l~~~ 95 (294)
T PLN02824 30 PALVLVH--GFGGNADHW-RKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFET----------WGEQLNDF 95 (294)
T ss_pred CeEEEEC--CCCCChhHH-HHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHH----------HHHHHHHH
Confidence 5666666 777665422 2456667665 59999999999998433 2210 00111111 13678888
Q ss_pred HHHhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCC
Q 019962 194 LEWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPH 235 (333)
Q Consensus 194 l~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ 235 (333)
++ +.+.+++.|+|+||||.+|..+|..+|+.+..+.++++.
T Consensus 96 l~-~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~ 136 (294)
T PLN02824 96 CS-DVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINIS 136 (294)
T ss_pred HH-HhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCC
Confidence 88 788899999999999999999999999999999998754
No 12
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.41 E-value=1.8e-12 Score=125.38 Aligned_cols=104 Identities=17% Similarity=0.209 Sum_probs=73.3
Q ss_pred CceEEEEecCCCChh--HHHhhhhchHHHhcCccEEEeecccCCCCCCC-cccCcccchhhhHHHhhhhhHHHHHHHHHH
Q 019962 117 KMACVVHLAGTGDHT--FERRLRLGGPLLKENIATMVLESPFYGQRRPL-LQRGAKLLCVSDLLLLGRATIEEARCLLHW 193 (333)
Q Consensus 117 ~~v~viH~aG~Gd~~--~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~-~q~~s~l~~vsd~~~~g~~~i~E~r~ll~w 193 (333)
.++|++| |+|++. ||. .++..|.++||+|+.+|.|+||++..+ +. ..++. ..+.+...++++
T Consensus 88 ~~iv~lH--G~~~~~~~~~~--~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~----~~~~~-------~~~~dv~~~l~~ 152 (349)
T PLN02385 88 AAVCFCH--GYGDTCTFFFE--GIARKIASSGYGVFAMDYPGFGLSEGLHGY----IPSFD-------DLVDDVIEHYSK 152 (349)
T ss_pred eEEEEEC--CCCCccchHHH--HHHHHHHhCCCEEEEecCCCCCCCCCCCCC----cCCHH-------HHHHHHHHHHHH
Confidence 3444555 777553 344 678888889999999999999988432 21 11221 123455666666
Q ss_pred HHHh--cCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCC
Q 019962 194 LEWE--AGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPH 235 (333)
Q Consensus 194 l~~~--~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ 235 (333)
+..+ .+..++.|+|+||||.+|..+|..+|+.+..+.+++|.
T Consensus 153 l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~ 196 (349)
T PLN02385 153 IKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPM 196 (349)
T ss_pred HHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEeccc
Confidence 6521 12358999999999999999999999999988888864
No 13
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.39 E-value=4.8e-12 Score=120.76 Aligned_cols=107 Identities=17% Similarity=0.136 Sum_probs=74.4
Q ss_pred CceEEEEecCCCChhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHH
Q 019962 117 KMACVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEW 196 (333)
Q Consensus 117 ~~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~ 196 (333)
+.++++| |.|.+.-|....++..|.++||+|+.+|.|+||.+..... ....+ ...+.++..+++++..
T Consensus 60 ~~VvllH--G~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~---~~~~~-------~~~~~D~~~~i~~l~~ 127 (330)
T PLN02298 60 ALIFMVH--GYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRA---YVPNV-------DLVVEDCLSFFNSVKQ 127 (330)
T ss_pred eEEEEEc--CCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccc---cCCCH-------HHHHHHHHHHHHHHHh
Confidence 3355666 6663321222357788889999999999999998742211 01111 1245677888888872
Q ss_pred hc--CCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCC
Q 019962 197 EA--GFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPH 235 (333)
Q Consensus 197 ~~--g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ 235 (333)
+. ...+++|.|+||||.+|..+|..+|+.+..+.++++.
T Consensus 128 ~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~ 168 (330)
T PLN02298 128 REEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPM 168 (330)
T ss_pred cccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEeccc
Confidence 21 2357999999999999999999999988888887753
No 14
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.37 E-value=1.8e-11 Score=109.82 Aligned_cols=107 Identities=17% Similarity=0.084 Sum_probs=70.9
Q ss_pred CCceEEEEecCCCChhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHH
Q 019962 116 QKMACVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLE 195 (333)
Q Consensus 116 ~~~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~ 195 (333)
.+|++++|+.+.+.+.|+. .+...+.+.||+++.++.|++|.+..+.+... ..++.+ .. ..+.++++
T Consensus 25 ~~~vl~~hG~~g~~~~~~~--~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~-~~~~~~-------~~---~~~~~~~~ 91 (288)
T TIGR01250 25 KIKLLLLHGGPGMSHEYLE--NLRELLKEEGREVIMYDQLGCGYSDQPDDSDE-LWTIDY-------FV---DELEEVRE 91 (288)
T ss_pred CCeEEEEcCCCCccHHHHH--HHHHHHHhcCCEEEEEcCCCCCCCCCCCcccc-cccHHH-------HH---HHHHHHHH
Confidence 3567778854333333443 34444444599999999999999854432110 011100 11 23444555
Q ss_pred HhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCCC
Q 019962 196 WEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHS 236 (333)
Q Consensus 196 ~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~t 236 (333)
..+.+++.++|+||||.+|..+|..+|+.+..+.++++..
T Consensus 92 -~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (288)
T TIGR01250 92 -KLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLD 131 (288)
T ss_pred -HcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccc
Confidence 6788899999999999999999999999888888877543
No 15
>PRK13604 luxD acyl transferase; Provisional
Probab=99.37 E-value=1.1e-11 Score=120.34 Aligned_cols=177 Identities=12% Similarity=0.021 Sum_probs=100.2
Q ss_pred EEecCCCChhHHHhhhhchHHHhcCccEEEeecccC-CCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHHhcCC
Q 019962 122 VHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFY-GQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEWEAGF 200 (333)
Q Consensus 122 iH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~-G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~~~g~ 200 (333)
|-.||++.+- ....++|+.|.++||+|+++|+=.+ |.+. +.... ..+ .+ .+.|+.+.++|++ +.+.
T Consensus 41 Ii~HGf~~~~-~~~~~~A~~La~~G~~vLrfD~rg~~GeS~--G~~~~--~t~----s~---g~~Dl~aaid~lk-~~~~ 107 (307)
T PRK13604 41 LIASGFARRM-DHFAGLAEYLSSNGFHVIRYDSLHHVGLSS--GTIDE--FTM----SI---GKNSLLTVVDWLN-TRGI 107 (307)
T ss_pred EEeCCCCCCh-HHHHHHHHHHHHCCCEEEEecCCCCCCCCC--Ccccc--Ccc----cc---cHHHHHHHHHHHH-hcCC
Confidence 3455888653 2234799999999999999887555 6552 22111 111 11 2689999999999 6788
Q ss_pred CeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCcccccccccccc---CccHHHHHHHHHhhhhcCCHHHHHHHHHH
Q 019962 201 GKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAVVAFCEGILKH---GTAWEALREELAAKKVAMTLEEVRERMRN 277 (333)
Q Consensus 201 ~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta~~vfteGvl~~---~~~w~~L~~~l~~~~~~lt~~~a~~rl~~ 277 (333)
.+|+|.|.||||.+|.++|...+ ++.+..++|.+.-..+.+-.+.+ +..|..+...+......+. +...++.
T Consensus 108 ~~I~LiG~SmGgava~~~A~~~~--v~~lI~~sp~~~l~d~l~~~~~~~~~~~p~~~lp~~~d~~g~~l~---~~~f~~~ 182 (307)
T PRK13604 108 NNLGLIAASLSARIAYEVINEID--LSFLITAVGVVNLRDTLERALGYDYLSLPIDELPEDLDFEGHNLG---SEVFVTD 182 (307)
T ss_pred CceEEEEECHHHHHHHHHhcCCC--CCEEEEcCCcccHHHHHHHhhhcccccCccccccccccccccccc---HHHHHHH
Confidence 99999999999999977777443 66666666544311111101110 0112222110000000010 1122222
Q ss_pred hhccCCCC------CCCCCCCCCeEEEEEecCCccccchhhHHhhhc
Q 019962 278 VLSLTDVT------RFPIPKIPNAVIFVAATVSTVFDYHHEEVLKMD 318 (333)
Q Consensus 278 ~l~~t~l~------nf~~p~dp~~ilvV~g~~D~yVP~~~~~~L~~~ 318 (333)
.. ..++. +.....+ .++++|+|++|.+||.+.++.|.+.
T Consensus 183 ~~-~~~~~~~~s~i~~~~~l~-~PvLiIHG~~D~lVp~~~s~~l~e~ 227 (307)
T PRK13604 183 CF-KHGWDTLDSTINKMKGLD-IPFIAFTANNDSWVKQSEVIDLLDS 227 (307)
T ss_pred HH-hcCccccccHHHHHhhcC-CCEEEEEcCCCCccCHHHHHHHHHH
Confidence 11 11111 1111122 4599999999999999999988774
No 16
>PRK10749 lysophospholipase L2; Provisional
Probab=99.36 E-value=2.8e-11 Score=116.43 Aligned_cols=110 Identities=12% Similarity=0.128 Sum_probs=76.5
Q ss_pred CceEEEEecCCCChhHHHhhhhchHHHhcCccEEEeecccCCCCC-CCcccCcc-cchhhhHHHhhhhhHHHHHHHHHHH
Q 019962 117 KMACVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQRR-PLLQRGAK-LLCVSDLLLLGRATIEEARCLLHWL 194 (333)
Q Consensus 117 ~~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~Rk-P~~q~~s~-l~~vsd~~~~g~~~i~E~r~ll~wl 194 (333)
++++++| |.++|.- ++..++..|+++||+|+.++.|+||.+. +......+ ...+. ..+.++..+++.+
T Consensus 55 ~~vll~H--G~~~~~~-~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~-------~~~~d~~~~~~~~ 124 (330)
T PRK10749 55 RVVVICP--GRIESYV-KYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFN-------DYVDDLAAFWQQE 124 (330)
T ss_pred cEEEEEC--CccchHH-HHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHH-------HHHHHHHHHHHHH
Confidence 4555666 7776541 2226888899999999999999999884 32211111 11221 2344555666555
Q ss_pred HHhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCCC
Q 019962 195 EWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHS 236 (333)
Q Consensus 195 ~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~t 236 (333)
....+..++.++|+||||.+|..+|..+|+.+..+.+++|..
T Consensus 125 ~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~ 166 (330)
T PRK10749 125 IQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMF 166 (330)
T ss_pred HhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchh
Confidence 323477899999999999999999999999988888888753
No 17
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.35 E-value=2.2e-11 Score=114.73 Aligned_cols=114 Identities=11% Similarity=0.146 Sum_probs=77.4
Q ss_pred eeEEEeecCCCCCCCceEEEEecCCCChhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhh
Q 019962 103 ARVAFLAPKCVPPQKMACVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRA 182 (333)
Q Consensus 103 a~~~~~~p~~~~~~~~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~ 182 (333)
++..++.|+. ..+++++|||.|.... .| ..++..|.++||+|+.+++|.||+..+.... ..+..|
T Consensus 7 ~~~~~~~~~~--~~p~vvliHG~~~~~~-~w--~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~---~~~~~~------- 71 (273)
T PLN02211 7 EEVTDMKPNR--QPPHFVLIHGISGGSW-CW--YKIRCLMENSGYKVTCIDLKSAGIDQSDADS---VTTFDE------- 71 (273)
T ss_pred cccccccccC--CCCeEEEECCCCCCcC-cH--HHHHHHHHhCCCEEEEecccCCCCCCCCccc---CCCHHH-------
Confidence 3444455543 2345667774443322 23 2567778888999999999999976333211 111111
Q ss_pred hHHHHHHHHHHHHHhc-CCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCC
Q 019962 183 TIEEARCLLHWLEWEA-GFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPH 235 (333)
Q Consensus 183 ~i~E~r~ll~wl~~~~-g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ 235 (333)
.+..+.++++ +. +.+++.|+|+||||.++..+|..+|+.+..+.++++.
T Consensus 72 ---~~~~l~~~i~-~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~ 121 (273)
T PLN02211 72 ---YNKPLIDFLS-SLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAAT 121 (273)
T ss_pred ---HHHHHHHHHH-hcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccc
Confidence 1256777887 55 3589999999999999999999999999999888653
No 18
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.33 E-value=3e-12 Score=114.04 Aligned_cols=100 Identities=25% Similarity=0.281 Sum_probs=77.7
Q ss_pred ceEEEEecCCC-ChhHHHhhhhchHHHhcCccEEEeecccC-----CCCCCCcccCcccchhhhHHHhhhhhHHHHHHHH
Q 019962 118 MACVVHLAGTG-DHTFERRLRLGGPLLKENIATMVLESPFY-----GQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLL 191 (333)
Q Consensus 118 ~v~viH~aG~G-d~~~~~r~~la~pL~~~Gi~~ill~~Py~-----G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll 191 (333)
++++.|+||.- ||.++. +.+..|+.+||.|.++++||+ |.|||+.-..+...+. +..+
T Consensus 16 tilLaHGAGasmdSt~m~--~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~--------------~~~~ 79 (213)
T COG3571 16 TILLAHGAGASMDSTSMT--AVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEY--------------IVAI 79 (213)
T ss_pred EEEEecCCCCCCCCHHHH--HHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHH--------------HHHH
Confidence 44567877776 778887 789999999999999999999 6667877666666555 4444
Q ss_pred HHHHHhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccC
Q 019962 192 HWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLS 233 (333)
Q Consensus 192 ~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~ 233 (333)
.-+.....-+++.+.|+||||++|||+|..---+|..+.|++
T Consensus 80 aql~~~l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clg 121 (213)
T COG3571 80 AQLRAGLAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLG 121 (213)
T ss_pred HHHHhcccCCceeeccccccchHHHHHHHhhcCCcceEEEec
Confidence 444413334699999999999999999998777788888875
No 19
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.33 E-value=4.4e-12 Score=108.73 Aligned_cols=100 Identities=25% Similarity=0.324 Sum_probs=73.1
Q ss_pred EEEEecCCCChh-HHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHHhc
Q 019962 120 CVVHLAGTGDHT-FERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEWEA 198 (333)
Q Consensus 120 ~viH~aG~Gd~~-~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~~~ 198 (333)
++|| |.|.+. +|. .++..| ++||+++.++.|+||.+.++.+ ....+. -..+..+.++++ +.
T Consensus 2 v~~h--G~~~~~~~~~--~~~~~l-~~~~~v~~~d~~G~G~s~~~~~--~~~~~~----------~~~~~~l~~~l~-~~ 63 (228)
T PF12697_consen 2 VFLH--GFGGSSESWD--PLAEAL-ARGYRVIAFDLPGHGRSDPPPD--YSPYSI----------EDYAEDLAELLD-AL 63 (228)
T ss_dssp EEE---STTTTGGGGH--HHHHHH-HTTSEEEEEECTTSTTSSSHSS--GSGGSH----------HHHHHHHHHHHH-HT
T ss_pred EEEC--CCCCCHHHHH--HHHHHH-hCCCEEEEEecCCccccccccc--cCCcch----------hhhhhhhhhccc-cc
Confidence 4577 666554 333 477777 5799999999999999855543 001111 112356677777 77
Q ss_pred CCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCc
Q 019962 199 GFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSA 237 (333)
Q Consensus 199 g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta 237 (333)
+.+++.|+|+||||.+|..+|..+|+.+..+.++++...
T Consensus 64 ~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 64 GIKKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPP 102 (228)
T ss_dssp TTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSS
T ss_pred ccccccccccccccccccccccccccccccceeeccccc
Confidence 789999999999999999999999999999999886654
No 20
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.33 E-value=3.1e-11 Score=105.51 Aligned_cols=99 Identities=17% Similarity=0.173 Sum_probs=69.1
Q ss_pred Cce-EEEEecCCCChh-HHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHH
Q 019962 117 KMA-CVVHLAGTGDHT-FERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWL 194 (333)
Q Consensus 117 ~~v-~viH~aG~Gd~~-~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl 194 (333)
+|+ +++| |.|.+. .|. .++..| ++||+++.++.|+||.+..+....+... .++.+.+++
T Consensus 13 ~~~li~~h--g~~~~~~~~~--~~~~~l-~~~~~v~~~d~~G~G~s~~~~~~~~~~~--------------~~~~~~~~i 73 (251)
T TIGR02427 13 APVLVFIN--SLGTDLRMWD--PVLPAL-TPDFRVLRYDKRGHGLSDAPEGPYSIED--------------LADDVLALL 73 (251)
T ss_pred CCeEEEEc--CcccchhhHH--HHHHHh-hcccEEEEecCCCCCCCCCCCCCCCHHH--------------HHHHHHHHH
Confidence 444 4555 677554 333 344444 4699999999999998843322111111 124556666
Q ss_pred HHhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCC
Q 019962 195 EWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPH 235 (333)
Q Consensus 195 ~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ 235 (333)
+ ..+.+++.++|+||||.+|..+|..+|+.+..+.++++.
T Consensus 74 ~-~~~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~ 113 (251)
T TIGR02427 74 D-HLGIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTA 113 (251)
T ss_pred H-HhCCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCc
Confidence 6 677889999999999999999999999988888887643
No 21
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.30 E-value=5.1e-11 Score=107.71 Aligned_cols=110 Identities=17% Similarity=0.129 Sum_probs=74.8
Q ss_pred eEEEeecCCCCCCCceEEEEecCCCCh-hHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhh
Q 019962 104 RVAFLAPKCVPPQKMACVVHLAGTGDH-TFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRA 182 (333)
Q Consensus 104 ~~~~~~p~~~~~~~~v~viH~aG~Gd~-~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~ 182 (333)
+++...|+.-...+|++++| |.+++ ..|. .++..|. ++|+++.++.|+||.+.++.. .++++
T Consensus 4 ~~~~~~~~~~~~~~~iv~lh--G~~~~~~~~~--~~~~~l~-~~~~vi~~D~~G~G~s~~~~~-----~~~~~------- 66 (255)
T PRK10673 4 NIRAQTAQNPHNNSPIVLVH--GLFGSLDNLG--VLARDLV-NDHDIIQVDMRNHGLSPRDPV-----MNYPA------- 66 (255)
T ss_pred eeeeccCCCCCCCCCEEEEC--CCCCchhHHH--HHHHHHh-hCCeEEEECCCCCCCCCCCCC-----CCHHH-------
Confidence 33434454433446777778 54433 2332 4566664 479999999999998854322 12211
Q ss_pred hHHHHHHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCC
Q 019962 183 TIEEARCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSP 234 (333)
Q Consensus 183 ~i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~ 234 (333)
.+..+..+++ ..+.++++|+|.||||.+|..+|...|+.+..+.+++.
T Consensus 67 ---~~~d~~~~l~-~l~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~ 114 (255)
T PRK10673 67 ---MAQDLLDTLD-ALQIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDI 114 (255)
T ss_pred ---HHHHHHHHHH-HcCCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEec
Confidence 1244555665 56788999999999999999999999999988888753
No 22
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.30 E-value=4.6e-11 Score=111.75 Aligned_cols=99 Identities=16% Similarity=0.164 Sum_probs=76.5
Q ss_pred CCceEEEEecCCCChh-HHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHH
Q 019962 116 QKMACVVHLAGTGDHT-FERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWL 194 (333)
Q Consensus 116 ~~~v~viH~aG~Gd~~-~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl 194 (333)
.+|+++|| |++.+. .|+ .++..|.+.+ +++.++.|.||.+..+...++... -++.+.+++
T Consensus 27 g~~vvllH--G~~~~~~~w~--~~~~~L~~~~-~via~D~~G~G~S~~~~~~~~~~~--------------~a~dl~~ll 87 (295)
T PRK03592 27 GDPIVFLH--GNPTSSYLWR--NIIPHLAGLG-RCLAPDLIGMGASDKPDIDYTFAD--------------HARYLDAWF 87 (295)
T ss_pred CCEEEEEC--CCCCCHHHHH--HHHHHHhhCC-EEEEEcCCCCCCCCCCCCCCCHHH--------------HHHHHHHHH
Confidence 36777777 666444 344 5777888776 999999999999844332222111 236778888
Q ss_pred HHhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCC
Q 019962 195 EWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSP 234 (333)
Q Consensus 195 ~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~ 234 (333)
+ +.|.+++.|+|+||||.+|..+|..+|+.+..+.++++
T Consensus 88 ~-~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~ 126 (295)
T PRK03592 88 D-ALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEA 126 (295)
T ss_pred H-HhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECC
Confidence 8 78999999999999999999999999999999999886
No 23
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.30 E-value=1.8e-11 Score=116.47 Aligned_cols=126 Identities=13% Similarity=0.133 Sum_probs=88.8
Q ss_pred EEeecCCCCCCCceEEEEecCCCCh-h-HHH-hhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhh
Q 019962 106 AFLAPKCVPPQKMACVVHLAGTGDH-T-FER-RLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRA 182 (333)
Q Consensus 106 ~~~~p~~~~~~~~v~viH~aG~Gd~-~-~~~-r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~ 182 (333)
-+..|..-.++++++++| |+|.+ . +.+ ...+++.|.++||+|+.+|.|+||++..+... ..+ ..
T Consensus 15 ~~~~p~~~~~~~~VlllH--G~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~----~~~-------~~ 81 (266)
T TIGR03101 15 LYHPPVAVGPRGVVIYLP--PFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAA----ARW-------DV 81 (266)
T ss_pred EEecCCCCCCceEEEEEC--CCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcccc----CCH-------HH
Confidence 333454322233445566 77643 2 221 22579999999999999999999988533211 111 12
Q ss_pred hHHHHHHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCccccccccc
Q 019962 183 TIEEARCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAVVAFCEGI 245 (333)
Q Consensus 183 ~i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta~~vfteGv 245 (333)
.+.+++.+++|++ +.+..+++|+|+||||.+|..+|..+|+.+..+++++|...+..+...+
T Consensus 82 ~~~Dv~~ai~~L~-~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~~~l~~~ 143 (266)
T TIGR03101 82 WKEDVAAAYRWLI-EQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGKQQLQQF 143 (266)
T ss_pred HHHHHHHHHHHHH-hcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchHHHHHHH
Confidence 3567788999998 6788999999999999999999999999888888988766555554443
No 24
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.28 E-value=9.1e-12 Score=121.45 Aligned_cols=97 Identities=21% Similarity=0.232 Sum_probs=73.7
Q ss_pred CCCceEEEEecCCCChh-HHHhhhhchHHHhc-CccEEEeecccCCCC--CCCcccCcccchhhhHHHhhhhhHHHHHHH
Q 019962 115 PQKMACVVHLAGTGDHT-FERRLRLGGPLLKE-NIATMVLESPFYGQR--RPLLQRGAKLLCVSDLLLLGRATIEEARCL 190 (333)
Q Consensus 115 ~~~~v~viH~aG~Gd~~-~~~r~~la~pL~~~-Gi~~ill~~Py~G~R--kP~~q~~s~l~~vsd~~~~g~~~i~E~r~l 190 (333)
.++|+++|| |+|++. +|+ +...+|.++ |+.++.+|+|+||.+ +|++..+.....+ ..+
T Consensus 57 ~~~pvlllH--GF~~~~~~w~--~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v--------------~~i 118 (326)
T KOG1454|consen 57 DKPPVLLLH--GFGASSFSWR--RVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELV--------------ELI 118 (326)
T ss_pred CCCcEEEec--cccCCcccHh--hhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHH--------------HHH
Confidence 457777777 888764 455 566666664 899999999999944 5554444333333 455
Q ss_pred HHHHHHhcCCCeeeEeeechhHHHHHHhhhcCCCceeeec
Q 019962 191 LHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLP 230 (333)
Q Consensus 191 l~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp 230 (333)
.+.+. +.+..++.+.|+||||.+|..+|+.+|+.|..+.
T Consensus 119 ~~~~~-~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv 157 (326)
T KOG1454|consen 119 RRFVK-EVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLV 157 (326)
T ss_pred HHHHH-hhcCcceEEEEeCcHHHHHHHHHHhCccccccee
Confidence 56666 6677889999999999999999999999999999
No 25
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.28 E-value=5.3e-11 Score=108.02 Aligned_cols=98 Identities=23% Similarity=0.209 Sum_probs=68.3
Q ss_pred CceEEEEecCCCChh-HHHhhhhchHHHhcCccEEEeecccCCCCCCCcc-cCcccchhhhHHHhhhhhHHHHHHHHHHH
Q 019962 117 KMACVVHLAGTGDHT-FERRLRLGGPLLKENIATMVLESPFYGQRRPLLQ-RGAKLLCVSDLLLLGRATIEEARCLLHWL 194 (333)
Q Consensus 117 ~~v~viH~aG~Gd~~-~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q-~~s~l~~vsd~~~~g~~~i~E~r~ll~wl 194 (333)
++++++| |+|.+. .|+ .+...|.+ +|+++.++.|+||.+.++.. ..+... .++.+.+.+
T Consensus 29 ~~vv~~h--G~~~~~~~~~--~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~--------------~~~~l~~~i 89 (278)
T TIGR03056 29 PLLLLLH--GTGASTHSWR--DLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPS--------------MAEDLSALC 89 (278)
T ss_pred CeEEEEc--CCCCCHHHHH--HHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHH--------------HHHHHHHHH
Confidence 4555667 666443 232 45555544 79999999999998854432 222211 125556666
Q ss_pred HHhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCC
Q 019962 195 EWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSP 234 (333)
Q Consensus 195 ~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~ 234 (333)
+ +.+..+++|+|+||||.+|..+|..+|..+..+.++++
T Consensus 90 ~-~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~ 128 (278)
T TIGR03056 90 A-AEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINA 128 (278)
T ss_pred H-HcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcC
Confidence 6 67889999999999999999999999987776666654
No 26
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.28 E-value=6e-11 Score=108.37 Aligned_cols=93 Identities=20% Similarity=0.258 Sum_probs=68.1
Q ss_pred CceEEEEecCCCCh-hHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHH
Q 019962 117 KMACVVHLAGTGDH-TFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLE 195 (333)
Q Consensus 117 ~~v~viH~aG~Gd~-~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~ 195 (333)
+|+++|| |+|.+ ..|. .+...|.+ .|+++.+|.|+||.++... ..+. ..+.+.+.
T Consensus 14 ~~ivllH--G~~~~~~~w~--~~~~~L~~-~~~vi~~Dl~G~G~S~~~~-----~~~~--------------~~~~~~l~ 69 (256)
T PRK10349 14 VHLVLLH--GWGLNAEVWR--CIDEELSS-HFTLHLVDLPGFGRSRGFG-----ALSL--------------ADMAEAVL 69 (256)
T ss_pred CeEEEEC--CCCCChhHHH--HHHHHHhc-CCEEEEecCCCCCCCCCCC-----CCCH--------------HHHHHHHH
Confidence 3466777 66644 3454 56666654 5999999999999884321 1122 22333444
Q ss_pred HhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCC
Q 019962 196 WEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSP 234 (333)
Q Consensus 196 ~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~ 234 (333)
+.+.+++.++|+||||.+|..+|..+|+.+..+.++++
T Consensus 70 -~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~ 107 (256)
T PRK10349 70 -QQAPDKAIWLGWSLGGLVASQIALTHPERVQALVTVAS 107 (256)
T ss_pred -hcCCCCeEEEEECHHHHHHHHHHHhChHhhheEEEecC
Confidence 46779999999999999999999999999999999875
No 27
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.26 E-value=1.7e-10 Score=104.20 Aligned_cols=192 Identities=12% Similarity=0.070 Sum_probs=104.0
Q ss_pred EeecCCCCCCCceEEEEecCCCCh--hHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhH
Q 019962 107 FLAPKCVPPQKMACVVHLAGTGDH--TFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATI 184 (333)
Q Consensus 107 ~~~p~~~~~~~~v~viH~aG~Gd~--~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i 184 (333)
+++|......+|++ |.+||.|.+ .|.....++....+.|+.|+.++.|.++......++..... -..+....
T Consensus 3 ly~P~~~~~~~P~v-v~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~-----~~~~~~~~ 76 (212)
T TIGR01840 3 VYVPAGLTGPRALV-LALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHH-----RARGTGEV 76 (212)
T ss_pred EEcCCCCCCCCCEE-EEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccc-----cCCCCccH
Confidence 45676654445543 444466643 33321134444445799999999998875422111100000 00112345
Q ss_pred HHHHHHHHHHHHhcCC--CeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCccccccccccccCccHHHHHHHHHhh
Q 019962 185 EEARCLLHWLEWEAGF--GKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAVVAFCEGILKHGTAWEALREELAAK 262 (333)
Q Consensus 185 ~E~r~ll~wl~~~~g~--~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta~~vfteGvl~~~~~w~~L~~~l~~~ 262 (333)
.+...+++++.++.++ +++.|+|+||||.+|..+|+.+|+..+.+..+++...... +... ..+.. +
T Consensus 77 ~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~--~~~~------~~~~~-~--- 144 (212)
T TIGR01840 77 ESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEA--SSSI------SATPQ-M--- 144 (212)
T ss_pred HHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCccccc--ccch------hhHhh-c---
Confidence 5567888888744444 6999999999999999999999987777665553211000 0100 01110 0
Q ss_pred hhcCCHHHHHHHHHHhhccCCCCCCCCCCCCCeEEEEEecCCccccchhhHHhhhcccchh
Q 019962 263 KVAMTLEEVRERMRNVLSLTDVTRFPIPKIPNAVIFVAATVSTVFDYHHEEVLKMDSQHFF 323 (333)
Q Consensus 263 ~~~lt~~~a~~rl~~~l~~t~l~nf~~p~dp~~ilvV~g~~D~yVP~~~~~~L~~~~~~~~ 323 (333)
...- ..+.+..++..... ....+.-.+++++|++|..||.+.++.+.++-+..+
T Consensus 145 ~~~~----~~~~~~~~~~~~~~---~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~~~ 198 (212)
T TIGR01840 145 CTAA----TAASVCRLVRGMQS---EYNGPTPIMSVVHGDADYTVLPGNADEIRDAMLKVY 198 (212)
T ss_pred CCCC----CHHHHHHHHhccCC---cccCCCCeEEEEEcCCCceeCcchHHHHHHHHHHhc
Confidence 0000 11112222211000 011121137789999999999999998887655443
No 28
>PRK06489 hypothetical protein; Provisional
Probab=99.23 E-value=6.8e-11 Score=115.09 Aligned_cols=104 Identities=23% Similarity=0.302 Sum_probs=69.3
Q ss_pred CceEEEEecCCCCh--hHHHhhhhch-------HHHhcCccEEEeecccCCCC-CCCcccCcc--cchhhhHHHhhhhhH
Q 019962 117 KMACVVHLAGTGDH--TFERRLRLGG-------PLLKENIATMVLESPFYGQR-RPLLQRGAK--LLCVSDLLLLGRATI 184 (333)
Q Consensus 117 ~~v~viH~aG~Gd~--~~~~r~~la~-------pL~~~Gi~~ill~~Py~G~R-kP~~q~~s~--l~~vsd~~~~g~~~i 184 (333)
+|+++|| |+|.+ .|+ ...+.. ++..++|+|+.+++|+||++ +|.+..... ..++
T Consensus 70 pplvllH--G~~~~~~~~~-~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~----------- 135 (360)
T PRK06489 70 NAVLVLH--GTGGSGKSFL-SPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDY----------- 135 (360)
T ss_pred CeEEEeC--CCCCchhhhc-cchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccH-----------
Confidence 5677777 55533 343 112322 34457899999999999988 444321000 0111
Q ss_pred HH-HHHHHHHHHHhcCCCeee-EeeechhHHHHHHhhhcCCCceeeecccCC
Q 019962 185 EE-ARCLLHWLEWEAGFGKMG-VCGLSMGGVHAAMVGSLHPTPVATLPFLSP 234 (333)
Q Consensus 185 ~E-~r~ll~wl~~~~g~~~vg-v~G~SMGG~~Asl~A~~~P~~v~~vp~~~~ 234 (333)
.+ ++.++.++.+..|++++. |+|+||||.+|..+|..+|+.+..+.++++
T Consensus 136 ~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s 187 (360)
T PRK06489 136 DDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMAS 187 (360)
T ss_pred HHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeecc
Confidence 12 134556553368899986 899999999999999999999999988865
No 29
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.22 E-value=6.5e-11 Score=111.47 Aligned_cols=100 Identities=13% Similarity=0.162 Sum_probs=76.0
Q ss_pred CceEEEEecCCCCh-hHHHhhhhchHHHhcCccEEEeecccCCCCCCCcc--cCcccchhhhHHHhhhhhHHHHHHHHHH
Q 019962 117 KMACVVHLAGTGDH-TFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQ--RGAKLLCVSDLLLLGRATIEEARCLLHW 193 (333)
Q Consensus 117 ~~v~viH~aG~Gd~-~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q--~~s~l~~vsd~~~~g~~~i~E~r~ll~w 193 (333)
+|+|+|| |++.+ ..|. .++..|.+.||+|+.+++|+||++.++.+ .++.... +..+.+.
T Consensus 47 ~~lvliH--G~~~~~~~w~--~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~--------------a~~l~~~ 108 (302)
T PRK00870 47 PPVLLLH--GEPSWSYLYR--KMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARH--------------VEWMRSW 108 (302)
T ss_pred CEEEEEC--CCCCchhhHH--HHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHH--------------HHHHHHH
Confidence 5677777 66633 3444 67777877899999999999999854432 1222222 2556667
Q ss_pred HHHhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCC
Q 019962 194 LEWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPH 235 (333)
Q Consensus 194 l~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ 235 (333)
++ +.+.+++.|+|+||||.+|..+|..+|+.+..+.++++.
T Consensus 109 l~-~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 149 (302)
T PRK00870 109 FE-QLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTG 149 (302)
T ss_pred HH-HcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCC
Confidence 77 788999999999999999999999999999999988754
No 30
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.22 E-value=2.5e-10 Score=99.24 Aligned_cols=102 Identities=22% Similarity=0.137 Sum_probs=68.4
Q ss_pred CceEEEEecCCCChhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHH-HHHHHHHHH
Q 019962 117 KMACVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEE-ARCLLHWLE 195 (333)
Q Consensus 117 ~~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E-~r~ll~wl~ 195 (333)
++++++| |.+.+.... +.++..|. +|++|+.++.|+||....+.+. ..... .+ ++.++..+.
T Consensus 2 ~~vv~~h--G~~~~~~~~-~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~--~~~~~-----------~~~~~~~~~~~~ 64 (251)
T TIGR03695 2 PVLVFLH--GFLGSGADW-QALIELLG-PHFRCLAIDLPGHGSSQSPDEI--ERYDF-----------EEAAQDILATLL 64 (251)
T ss_pred CEEEEEc--CCCCchhhH-HHHHHHhc-ccCeEEEEcCCCCCCCCCCCcc--ChhhH-----------HHHHHHHHHHHH
Confidence 3556677 555443321 25677776 7999999999999988332210 01111 11 133233332
Q ss_pred HhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCC
Q 019962 196 WEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPH 235 (333)
Q Consensus 196 ~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ 235 (333)
++.+.+++.+.|+||||.+|..+|..+|+.+..+.++++.
T Consensus 65 ~~~~~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~ 104 (251)
T TIGR03695 65 DQLGIEPFFLVGYSMGGRIALYYALQYPERVQGLILESGS 104 (251)
T ss_pred HHcCCCeEEEEEeccHHHHHHHHHHhCchheeeeEEecCC
Confidence 2668899999999999999999999999988888777653
No 31
>PLN02578 hydrolase
Probab=99.18 E-value=3e-10 Score=110.45 Aligned_cols=99 Identities=18% Similarity=0.156 Sum_probs=71.7
Q ss_pred CCceEEEEecCCCChh-HHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHH
Q 019962 116 QKMACVVHLAGTGDHT-FERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWL 194 (333)
Q Consensus 116 ~~~v~viH~aG~Gd~~-~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl 194 (333)
.+|+++|| |+|.+. .|. .+...| .++|+|+.+|.|+||....+...++.... ++.+.+++
T Consensus 86 g~~vvliH--G~~~~~~~w~--~~~~~l-~~~~~v~~~D~~G~G~S~~~~~~~~~~~~--------------a~~l~~~i 146 (354)
T PLN02578 86 GLPIVLIH--GFGASAFHWR--YNIPEL-AKKYKVYALDLLGFGWSDKALIEYDAMVW--------------RDQVADFV 146 (354)
T ss_pred CCeEEEEC--CCCCCHHHHH--HHHHHH-hcCCEEEEECCCCCCCCCCcccccCHHHH--------------HHHHHHHH
Confidence 35777777 777553 444 444444 45799999999999988332211111111 25677778
Q ss_pred HHhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCC
Q 019962 195 EWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSP 234 (333)
Q Consensus 195 ~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~ 234 (333)
+ ..+.+++.+.|+||||.+|..+|..+|+.+..+.++++
T Consensus 147 ~-~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~ 185 (354)
T PLN02578 147 K-EVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNS 185 (354)
T ss_pred H-HhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECC
Confidence 7 67789999999999999999999999999998888764
No 32
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.18 E-value=2.7e-10 Score=99.54 Aligned_cols=94 Identities=20% Similarity=0.229 Sum_probs=65.5
Q ss_pred CceEEEEecCCCChh-HHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHH
Q 019962 117 KMACVVHLAGTGDHT-FERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLE 195 (333)
Q Consensus 117 ~~v~viH~aG~Gd~~-~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~ 195 (333)
+|++++| |+|.+. .|. .++..|. ++++++.++.|+||.+.+... ... ..+.+.+.
T Consensus 5 ~~iv~~H--G~~~~~~~~~--~~~~~l~-~~~~vi~~d~~G~G~s~~~~~-----~~~--------------~~~~~~~~ 60 (245)
T TIGR01738 5 VHLVLIH--GWGMNAEVFR--CLDEELS-AHFTLHLVDLPGHGRSRGFGP-----LSL--------------ADAAEAIA 60 (245)
T ss_pred ceEEEEc--CCCCchhhHH--HHHHhhc-cCeEEEEecCCcCccCCCCCC-----cCH--------------HHHHHHHH
Confidence 5666777 677554 443 5565554 579999999999999744321 122 22223333
Q ss_pred HhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCC
Q 019962 196 WEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPH 235 (333)
Q Consensus 196 ~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ 235 (333)
....+++.++|.||||.+|..+|..+|+.+..+.+++++
T Consensus 61 -~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~ 99 (245)
T TIGR01738 61 -AQAPDPAIWLGWSLGGLVALHIAATHPDRVRALVTVASS 99 (245)
T ss_pred -HhCCCCeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCC
Confidence 233479999999999999999999999988888877654
No 33
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.17 E-value=4.2e-10 Score=107.82 Aligned_cols=99 Identities=23% Similarity=0.308 Sum_probs=69.9
Q ss_pred CceEEEEecCCCChh-HHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHH
Q 019962 117 KMACVVHLAGTGDHT-FERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLE 195 (333)
Q Consensus 117 ~~v~viH~aG~Gd~~-~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~ 195 (333)
+|++++| |+|.+. .|. .+...|.+ +|+++.++.|+||...+.....+.... ++.+.+.++
T Consensus 132 ~~vl~~H--G~~~~~~~~~--~~~~~l~~-~~~v~~~d~~g~G~s~~~~~~~~~~~~--------------~~~~~~~~~ 192 (371)
T PRK14875 132 TPVVLIH--GFGGDLNNWL--FNHAALAA-GRPVIALDLPGHGASSKAVGAGSLDEL--------------AAAVLAFLD 192 (371)
T ss_pred CeEEEEC--CCCCccchHH--HHHHHHhc-CCEEEEEcCCCCCCCCCCCCCCCHHHH--------------HHHHHHHHH
Confidence 5666777 666443 332 34445544 599999999999988433221211111 245566666
Q ss_pred HhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCC
Q 019962 196 WEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPH 235 (333)
Q Consensus 196 ~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ 235 (333)
+.+..++.|+|.||||.+|..+|..+|+.+..+.++++.
T Consensus 193 -~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~ 231 (371)
T PRK14875 193 -ALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPA 231 (371)
T ss_pred -hcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcC
Confidence 778889999999999999999999999888888888764
No 34
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.17 E-value=1.9e-09 Score=107.75 Aligned_cols=118 Identities=17% Similarity=0.150 Sum_probs=76.8
Q ss_pred eEEEeecCCCCCCCceEEEEecCCCChhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhh
Q 019962 104 RVAFLAPKCVPPQKMACVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRAT 183 (333)
Q Consensus 104 ~~~~~~p~~~~~~~~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~ 183 (333)
+.+...|+.-.+..+++++| |.+++.+. +..++..|.++||+|+.++.|.||++..... +..+ ....
T Consensus 124 ~~~~~~p~~~~~~~~Vl~lH--G~~~~~~~-~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~------~~~~----~~~~ 190 (395)
T PLN02652 124 FCRSWAPAAGEMRGILIIIH--GLNEHSGR-YLHFAKQLTSCGFGVYAMDWIGHGGSDGLHG------YVPS----LDYV 190 (395)
T ss_pred EEEEecCCCCCCceEEEEEC--CchHHHHH-HHHHHHHHHHCCCEEEEeCCCCCCCCCCCCC------CCcC----HHHH
Confidence 34444454322223444555 88866543 2368999999999999999999998743211 0101 1133
Q ss_pred HHHHHHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCCC---ceeeecccCCC
Q 019962 184 IEEARCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPT---PVATLPFLSPH 235 (333)
Q Consensus 184 i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~---~v~~vp~~~~~ 235 (333)
+.|+..+++++..+.+..++.|.|+||||.+|..+| .+|+ .+..+.+.+|.
T Consensus 191 ~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a-~~p~~~~~v~glVL~sP~ 244 (395)
T PLN02652 191 VEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAA-SYPSIEDKLEGIVLTSPA 244 (395)
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHH-hccCcccccceEEEECcc
Confidence 567788888887333446899999999999998766 4564 56667666653
No 35
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.14 E-value=2e-10 Score=111.06 Aligned_cols=101 Identities=17% Similarity=0.152 Sum_probs=72.8
Q ss_pred CCceEEEEecCCCChh-----------HHHhhhhch---HHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhh
Q 019962 116 QKMACVVHLAGTGDHT-----------FERRLRLGG---PLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGR 181 (333)
Q Consensus 116 ~~~v~viH~aG~Gd~~-----------~~~r~~la~---pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~ 181 (333)
..|+++||+.+.+.+. ||. .+.. .|..++|+|+.+++|+||++.+.. ++..
T Consensus 57 ~~p~vll~g~~~~~~~~~~~~~~~~~~~w~--~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~~--~~~~----------- 121 (343)
T PRK08775 57 GAPVVFVAGGISAHRHVAATATFPEKGWWE--GLVGSGRALDPARFRLLAFDFIGADGSLDVP--IDTA----------- 121 (343)
T ss_pred CCCEEEEecCCCcccccccccCCCCCCcch--hccCCCCccCccccEEEEEeCCCCCCCCCCC--CCHH-----------
Confidence 3577778744443332 555 3333 455568999999999998774321 1111
Q ss_pred hhHHHHHHHHHHHHHhcCCCee-eEeeechhHHHHHHhhhcCCCceeeecccCCC
Q 019962 182 ATIEEARCLLHWLEWEAGFGKM-GVCGLSMGGVHAAMVGSLHPTPVATLPFLSPH 235 (333)
Q Consensus 182 ~~i~E~r~ll~wl~~~~g~~~v-gv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ 235 (333)
.-++.+.++++ ++|.++. .|+|+||||.+|..+|..+|+.+..+.++++.
T Consensus 122 ---~~a~dl~~ll~-~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~ 172 (343)
T PRK08775 122 ---DQADAIALLLD-ALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGA 172 (343)
T ss_pred ---HHHHHHHHHHH-HcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECcc
Confidence 12367778888 7899775 79999999999999999999999999998764
No 36
>PRK10985 putative hydrolase; Provisional
Probab=99.13 E-value=3.6e-10 Score=108.68 Aligned_cols=102 Identities=21% Similarity=0.231 Sum_probs=69.8
Q ss_pred CceEEEEecCCCCh---hHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHH
Q 019962 117 KMACVVHLAGTGDH---TFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHW 193 (333)
Q Consensus 117 ~~v~viH~aG~Gd~---~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~w 193 (333)
++++++| |.+.+ .|.. .++..|.++||+|+.++++.||........ .. . . ..+.|++.+++|
T Consensus 59 p~vll~H--G~~g~~~~~~~~--~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~--~~-~------~--~~~~D~~~~i~~ 123 (324)
T PRK10985 59 PRLVLFH--GLEGSFNSPYAH--GLLEAAQKRGWLGVVMHFRGCSGEPNRLHR--IY-H------S--GETEDARFFLRW 123 (324)
T ss_pred CEEEEeC--CCCCCCcCHHHH--HHHHHHHHCCCEEEEEeCCCCCCCccCCcc--eE-C------C--CchHHHHHHHHH
Confidence 3445666 66533 3443 688899999999999999999855222111 00 0 1 235677889999
Q ss_pred HHHhcCCCeeeEeeechhHHHHHHhhhcCCCc--eeeecccC
Q 019962 194 LEWEAGFGKMGVCGLSMGGVHAAMVGSLHPTP--VATLPFLS 233 (333)
Q Consensus 194 l~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~--v~~vp~~~ 233 (333)
++++.+..++.++|.||||.+++..++.+++. +..+.+++
T Consensus 124 l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~ 165 (324)
T PRK10985 124 LQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVS 165 (324)
T ss_pred HHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEc
Confidence 98556888999999999999988887776532 44444444
No 37
>PRK07581 hypothetical protein; Validated
Probab=99.13 E-value=3e-10 Score=108.96 Aligned_cols=113 Identities=17% Similarity=0.068 Sum_probs=71.1
Q ss_pred CceEEEEecCCCChhHHHhh-hhchHHHhcCccEEEeecccCCCCC-CCcc--cCcccchhhhHHHhhhhhHHHHHHHHH
Q 019962 117 KMACVVHLAGTGDHTFERRL-RLGGPLLKENIATMVLESPFYGQRR-PLLQ--RGAKLLCVSDLLLLGRATIEEARCLLH 192 (333)
Q Consensus 117 ~~v~viH~aG~Gd~~~~~r~-~la~pL~~~Gi~~ill~~Py~G~Rk-P~~q--~~s~l~~vsd~~~~g~~~i~E~r~ll~ 192 (333)
+|++++|+.+.+++.+|... .....|...+|+||.+++|+||.+. |... .++.. ++-. .....++.....
T Consensus 41 ~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~ 114 (339)
T PRK07581 41 DNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAA----RFPH--VTIYDNVRAQHR 114 (339)
T ss_pred CCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCC----CCCc--eeHHHHHHHHHH
Confidence 45565663334455555421 1113555679999999999999884 4321 11111 1000 001123344344
Q ss_pred HHHHhcCCCee-eEeeechhHHHHHHhhhcCCCceeeecccCCC
Q 019962 193 WLEWEAGFGKM-GVCGLSMGGVHAAMVGSLHPTPVATLPFLSPH 235 (333)
Q Consensus 193 wl~~~~g~~~v-gv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ 235 (333)
.+.+.+|++++ +|+|+||||.+|..+|..+|+.+..+.+++..
T Consensus 115 ~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~ 158 (339)
T PRK07581 115 LLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGT 158 (339)
T ss_pred HHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecC
Confidence 44336899995 79999999999999999999999999988743
No 38
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.12 E-value=1.2e-09 Score=112.02 Aligned_cols=100 Identities=17% Similarity=0.249 Sum_probs=69.1
Q ss_pred CceEEEEecCCCCh-hHHHhh---hhchHHHhcCccEEEeecccCCCC-CCCcccCcccchhhhHHHhhhhhHHHHHHH-
Q 019962 117 KMACVVHLAGTGDH-TFERRL---RLGGPLLKENIATMVLESPFYGQR-RPLLQRGAKLLCVSDLLLLGRATIEEARCL- 190 (333)
Q Consensus 117 ~~v~viH~aG~Gd~-~~~~r~---~la~pL~~~Gi~~ill~~Py~G~R-kP~~q~~s~l~~vsd~~~~g~~~i~E~r~l- 190 (333)
+|+++|| |++.+ .+|... .+++ +.+.||+++.+|.|+||++ +|.+..++ ..++ + ..+
T Consensus 202 ~~VVLlH--G~~~s~~~W~~~~~~~L~~-~~~~~yrVia~Dl~G~G~S~~p~~~~yt----l~~~-------a---~~l~ 264 (481)
T PLN03087 202 EDVLFIH--GFISSSAFWTETLFPNFSD-AAKSTYRLFAVDLLGFGRSPKPADSLYT----LREH-------L---EMIE 264 (481)
T ss_pred CeEEEEC--CCCccHHHHHHHHHHHHHH-HhhCCCEEEEECCCCCCCCcCCCCCcCC----HHHH-------H---HHHH
Confidence 4666666 66644 455421 2332 2357999999999999988 44332221 1111 1 222
Q ss_pred HHHHHHhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCC
Q 019962 191 LHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSP 234 (333)
Q Consensus 191 l~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~ 234 (333)
...++ +.|.+++.++|+||||.+|..+|..+|+.+..+.++++
T Consensus 265 ~~ll~-~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~ 307 (481)
T PLN03087 265 RSVLE-RYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAP 307 (481)
T ss_pred HHHHH-HcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECC
Confidence 13455 78899999999999999999999999999999988875
No 39
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.12 E-value=4.6e-10 Score=92.99 Aligned_cols=129 Identities=21% Similarity=0.240 Sum_probs=88.5
Q ss_pred eEEEEecCCCChhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHH-h
Q 019962 119 ACVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEW-E 197 (333)
Q Consensus 119 v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~-~ 197 (333)
++++| |.|.+.-. ...+++.|+++||.++.++.|+++.+.-. . +...++++++. .
T Consensus 2 vv~~H--G~~~~~~~-~~~~~~~l~~~G~~v~~~~~~~~~~~~~~-------~--------------~~~~~~~~~~~~~ 57 (145)
T PF12695_consen 2 VVLLH--GWGGSRRD-YQPLAEALAEQGYAVVAFDYPGHGDSDGA-------D--------------AVERVLADIRAGY 57 (145)
T ss_dssp EEEEC--TTTTTTHH-HHHHHHHHHHTTEEEEEESCTTSTTSHHS-------H--------------HHHHHHHHHHHHH
T ss_pred EEEEC--CCCCCHHH-HHHHHHHHHHCCCEEEEEecCCCCccchh-------H--------------HHHHHHHHHHhhc
Confidence 45566 55533211 12688899999999999999999998111 1 33666777531 3
Q ss_pred cCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCccccccccccccCccHHHHHHHHHhhhhcCCHHHHHHHHHH
Q 019962 198 AGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAVVAFCEGILKHGTAWEALREELAAKKVAMTLEEVRERMRN 277 (333)
Q Consensus 198 ~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta~~vfteGvl~~~~~w~~L~~~l~~~~~~lt~~~a~~rl~~ 277 (333)
.+..+++++|+||||.+|..++..+| .+..+.++++ +. +++.+.+
T Consensus 58 ~~~~~i~l~G~S~Gg~~a~~~~~~~~-~v~~~v~~~~------~~--------~~~~~~~-------------------- 102 (145)
T PF12695_consen 58 PDPDRIILIGHSMGGAIAANLAARNP-RVKAVVLLSP------YP--------DSEDLAK-------------------- 102 (145)
T ss_dssp CTCCEEEEEEETHHHHHHHHHHHHST-TESEEEEESE------SS--------GCHHHTT--------------------
T ss_pred CCCCcEEEEEEccCcHHHHHHhhhcc-ceeEEEEecC------cc--------chhhhhc--------------------
Confidence 47899999999999999999999886 4555555543 11 1111111
Q ss_pred hhccCCCCCCCCCCCCCeEEEEEecCCccccchhhHHhhhccc
Q 019962 278 VLSLTDVTRFPIPKIPNAVIFVAATVSTVFDYHHEEVLKMDSQ 320 (333)
Q Consensus 278 ~l~~t~l~nf~~p~dp~~ilvV~g~~D~yVP~~~~~~L~~~~~ 320 (333)
..-++++++|.+|.++|.+..+++.+.-+
T Consensus 103 --------------~~~pv~~i~g~~D~~~~~~~~~~~~~~~~ 131 (145)
T PF12695_consen 103 --------------IRIPVLFIHGENDPLVPPEQVRRLYEALP 131 (145)
T ss_dssp --------------TTSEEEEEEETT-SSSHHHHHHHHHHHHC
T ss_pred --------------cCCcEEEEEECCCCcCCHHHHHHHHHHcC
Confidence 01159999999999999999998866543
No 40
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.12 E-value=4.9e-10 Score=105.67 Aligned_cols=100 Identities=15% Similarity=0.159 Sum_probs=69.5
Q ss_pred CCceEEEEecCCCChhHHHhhhhchHHHhcCccEEEeecccCCCCC-CCcccCcccchhhhHHHhhhhhHHHH-HHHHHH
Q 019962 116 QKMACVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQRR-PLLQRGAKLLCVSDLLLLGRATIEEA-RCLLHW 193 (333)
Q Consensus 116 ~~~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~Rk-P~~q~~s~l~~vsd~~~~g~~~i~E~-r~ll~w 193 (333)
.+|+++|| |++++.+.. +.+...| .++|+++.++.|.||.+. |.+..++ +.+. ..+.+.
T Consensus 34 ~~~iv~lH--G~~~~~~~~-~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~---------------~~~~~~~~~~~ 94 (286)
T PRK03204 34 GPPILLCH--GNPTWSFLY-RDIIVAL-RDRFRCVAPDYLGFGLSERPSGFGYQ---------------IDEHARVIGEF 94 (286)
T ss_pred CCEEEEEC--CCCccHHHH-HHHHHHH-hCCcEEEEECCCCCCCCCCCCccccC---------------HHHHHHHHHHH
Confidence 35655666 666554422 2445455 457999999999999884 3321111 1121 344445
Q ss_pred HHHhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCC
Q 019962 194 LEWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPH 235 (333)
Q Consensus 194 l~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ 235 (333)
++ +.|.+++.++|.||||.+|..+|..+|+.+..+.++++.
T Consensus 95 ~~-~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~ 135 (286)
T PRK03204 95 VD-HLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTW 135 (286)
T ss_pred HH-HhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECcc
Confidence 55 778899999999999999999999999999998887653
No 41
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.12 E-value=4.2e-10 Score=111.76 Aligned_cols=154 Identities=20% Similarity=0.280 Sum_probs=90.9
Q ss_pred CCceeeeeeccCeEEEeeeeeCCCcccccCCCCccccceeEEEeecCCCCCC-CceEEEEecCCCChh------------
Q 019962 65 QPIWRTIWETQTAVLREGVFRTPCDEQLMSALPPESHNARVAFLAPKCVPPQ-KMACVVHLAGTGDHT------------ 131 (333)
Q Consensus 65 ~p~~~~~~~~~~~~~~~g~F~Sp~~~~~p~~lp~~s~~a~~~~~~p~~~~~~-~~v~viH~aG~Gd~~------------ 131 (333)
.|+-...++..+.+++...|.+- |. ..+.+-+++|+.-.+. +.++++|++|.|...
T Consensus 74 ~p~~l~~eqrdGY~~EKv~f~~~---------p~--~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~ 142 (390)
T PF12715_consen 74 EPEVLETEQRDGYTREKVEFNTT---------PG--SRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLK 142 (390)
T ss_dssp --EEEEEEEETTEEEEEEEE--S---------TT--B-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG-
T ss_pred CCeEEEEEecCCeEEEEEEEEcc---------CC--eeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccc
Confidence 44444444556778888888433 22 3467788899985443 555688988876211
Q ss_pred --HHHhh-hhchHHHhcCccEEEeecccCCCCCCCcccCc----ccchhh-hHHHhhhh----hHHHHHHHHHHHHHhcC
Q 019962 132 --FERRL-RLGGPLLKENIATMVLESPFYGQRRPLLQRGA----KLLCVS-DLLLLGRA----TIEEARCLLHWLEWEAG 199 (333)
Q Consensus 132 --~~~r~-~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s----~l~~vs-d~~~~g~~----~i~E~r~ll~wl~~~~g 199 (333)
+.+.+ .++..|+++||-|+.++++++|.|.+...... .....+ -++.+|++ ..-|....++||. ++.
T Consensus 143 ~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~-slp 221 (390)
T PF12715_consen 143 DDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLA-SLP 221 (390)
T ss_dssp -STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHC-T-T
T ss_pred hhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHh-cCc
Confidence 22222 37899999999999999999999955432111 112222 23345544 2445566999999 554
Q ss_pred C---CeeeEeeechhHHHHHHhhhcCCCceeeec
Q 019962 200 F---GKMGVCGLSMGGVHAAMVGSLHPTPVATLP 230 (333)
Q Consensus 200 ~---~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp 230 (333)
. ++||++|+||||+.|-++|+.++++.+.+.
T Consensus 222 eVD~~RIG~~GfSmGg~~a~~LaALDdRIka~v~ 255 (390)
T PF12715_consen 222 EVDPDRIGCMGFSMGGYRAWWLAALDDRIKATVA 255 (390)
T ss_dssp TEEEEEEEEEEEGGGHHHHHHHHHH-TT--EEEE
T ss_pred ccCccceEEEeecccHHHHHHHHHcchhhHhHhh
Confidence 3 999999999999999999999998766653
No 42
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.09 E-value=1.8e-09 Score=105.25 Aligned_cols=217 Identities=18% Similarity=0.111 Sum_probs=126.8
Q ss_pred eccCeEEEeeeeeCCCcccccCCCCccccceeEEEeecCCCCCCCceEEEEecCCCCh-hHHHhhhhchHHHhcCccEEE
Q 019962 73 ETQTAVLREGVFRTPCDEQLMSALPPESHNARVAFLAPKCVPPQKMACVVHLAGTGDH-TFERRLRLGGPLLKENIATMV 151 (333)
Q Consensus 73 ~~~~~~~~~g~F~Sp~~~~~p~~lp~~s~~a~~~~~~p~~~~~~~~v~viH~aG~Gd~-~~~~r~~la~pL~~~Gi~~il 151 (333)
....+.+++.+|.|.= ....+..+++|+.-....|+ +|+.+|.|.. ..+.. ...++.+|+.++.
T Consensus 50 ~~~~~~vy~v~f~s~~-----------g~~V~g~l~~P~~~~~~~Pa-vv~~hGyg~~~~~~~~---~~~~a~~G~~vl~ 114 (320)
T PF05448_consen 50 PTPGVEVYDVSFESFD-----------GSRVYGWLYRPKNAKGKLPA-VVQFHGYGGRSGDPFD---LLPWAAAGYAVLA 114 (320)
T ss_dssp SBSSEEEEEEEEEEGG-----------GEEEEEEEEEES-SSSSEEE-EEEE--TT--GGGHHH---HHHHHHTT-EEEE
T ss_pred CCCCEEEEEEEEEccC-----------CCEEEEEEEecCCCCCCcCE-EEEecCCCCCCCCccc---ccccccCCeEEEE
Confidence 3568899999998862 25678999999954455555 3565666633 22221 1357789999999
Q ss_pred eecccCCCCCCCcccC----------cccch-hhhHHHhhhhhHHHHHHHHHHHHHhcC--CCeeeEeeechhHHHHHHh
Q 019962 152 LESPFYGQRRPLLQRG----------AKLLC-VSDLLLLGRATIEEARCLLHWLEWEAG--FGKMGVCGLSMGGVHAAMV 218 (333)
Q Consensus 152 l~~Py~G~RkP~~q~~----------s~l~~-vsd~~~~g~~~i~E~r~ll~wl~~~~g--~~~vgv~G~SMGG~~Asl~ 218 (333)
++.-..|.+.+..... .++.+ -.+++. ...+.++...++++.+..+ -.+|+++|.|.||..|.++
T Consensus 115 ~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yy--r~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~ 192 (320)
T PF05448_consen 115 MDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYY--RRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAA 192 (320)
T ss_dssp E--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HH--HHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHH
T ss_pred ecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHH--HHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHH
Confidence 9998887443332111 11111 212221 2357899999999994333 3899999999999999999
Q ss_pred hhcCCCceeeecccCCCCcccccccccccc---CccHHHHHHHHH-hhhhcCCHHHHHHHHHHhhccCCCCCCCCCCCCC
Q 019962 219 GSLHPTPVATLPFLSPHSAVVAFCEGILKH---GTAWEALREELA-AKKVAMTLEEVRERMRNVLSLTDVTRFPIPKIPN 294 (333)
Q Consensus 219 A~~~P~~v~~vp~~~~~ta~~vfteGvl~~---~~~w~~L~~~l~-~~~~~lt~~~a~~rl~~~l~~t~l~nf~~p~dp~ 294 (333)
|+.+|+..++++.++..+-- ++.+.. ...|..+..-+. .+.. .+..+++-+.|.+-+..||..-+. -
T Consensus 193 aaLd~rv~~~~~~vP~l~d~----~~~~~~~~~~~~y~~~~~~~~~~d~~----~~~~~~v~~~L~Y~D~~nfA~ri~-~ 263 (320)
T PF05448_consen 193 AALDPRVKAAAADVPFLCDF----RRALELRADEGPYPEIRRYFRWRDPH----HEREPEVFETLSYFDAVNFARRIK-C 263 (320)
T ss_dssp HHHSST-SEEEEESESSSSH----HHHHHHT--STTTHHHHHHHHHHSCT----HCHHHHHHHHHHTT-HHHHGGG---S
T ss_pred HHhCccccEEEecCCCccch----hhhhhcCCccccHHHHHHHHhccCCC----cccHHHHHHHHhhhhHHHHHHHcC-C
Confidence 99999988788776432221 111111 234455444221 1111 123344455567777878866433 2
Q ss_pred eEEEEEecCCccccchhhHHh
Q 019962 295 AVIFVAATVSTVFDYHHEEVL 315 (333)
Q Consensus 295 ~ilvV~g~~D~yVP~~~~~~L 315 (333)
++++-+|-.|...|+++.-..
T Consensus 264 pvl~~~gl~D~~cPP~t~fA~ 284 (320)
T PF05448_consen 264 PVLFSVGLQDPVCPPSTQFAA 284 (320)
T ss_dssp EEEEEEETT-SSS-HHHHHHH
T ss_pred CEEEEEecCCCCCCchhHHHH
Confidence 499999999999999887544
No 43
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.08 E-value=3.3e-09 Score=102.95 Aligned_cols=105 Identities=11% Similarity=0.174 Sum_probs=76.4
Q ss_pred CCCceEEEEecCCCChhHHH----hhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHH
Q 019962 115 PQKMACVVHLAGTGDHTFER----RLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCL 190 (333)
Q Consensus 115 ~~~~v~viH~aG~Gd~~~~~----r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~l 190 (333)
+++|++++| |...++|.. .+.+++.|+++||+|++++..++|..... ....|+.. .+....
T Consensus 61 ~~~pvl~v~--~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~-------~~~~d~~~------~~~~~~ 125 (350)
T TIGR01836 61 HKTPLLIVY--ALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY-------LTLDDYIN------GYIDKC 125 (350)
T ss_pred CCCcEEEec--cccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc-------CCHHHHHH------HHHHHH
Confidence 456777777 566666553 23689999999999999998776653211 12222211 124677
Q ss_pred HHHHHHhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCC
Q 019962 191 LHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSP 234 (333)
Q Consensus 191 l~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~ 234 (333)
++++.++.|..++.++|+||||.++..+++.+|+.+..+.++++
T Consensus 126 v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~ 169 (350)
T TIGR01836 126 VDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVT 169 (350)
T ss_pred HHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEecc
Confidence 88887677889999999999999999999999988877777764
No 44
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.06 E-value=2.7e-09 Score=106.31 Aligned_cols=101 Identities=17% Similarity=0.170 Sum_probs=74.0
Q ss_pred CceEEEEecCCCChhHHHhhhhchHHHhcCccEEEeecccCCCC-CCCcc---cCcccchhhhHHHhhhhhHHHHHHHHH
Q 019962 117 KMACVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQR-RPLLQ---RGAKLLCVSDLLLLGRATIEEARCLLH 192 (333)
Q Consensus 117 ~~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~R-kP~~q---~~s~l~~vsd~~~~g~~~i~E~r~ll~ 192 (333)
+++++|| |++.+.+..+ .++..|. ++|+|+.+++|+||.+ +|... .++....+ ..+.+
T Consensus 128 ~~ivllH--G~~~~~~~w~-~~~~~L~-~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a--------------~~l~~ 189 (383)
T PLN03084 128 PPVLLIH--GFPSQAYSYR-KVLPVLS-KNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYV--------------SSLES 189 (383)
T ss_pred CeEEEEC--CCCCCHHHHH-HHHHHHh-cCCEEEEECCCCCCCCCCCcccccccCCHHHHH--------------HHHHH
Confidence 5666677 7776554322 4555565 5899999999999988 44321 11211122 55667
Q ss_pred HHHHhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCCC
Q 019962 193 WLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHS 236 (333)
Q Consensus 193 wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~t 236 (333)
+++ +.+.+++.|+|+||||.+|..+|..+|+.+..+.++++..
T Consensus 190 ~i~-~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~ 232 (383)
T PLN03084 190 LID-ELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPL 232 (383)
T ss_pred HHH-HhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCC
Confidence 777 7788999999999999999999999999999999998653
No 45
>PLN02442 S-formylglutathione hydrolase
Probab=99.05 E-value=4.9e-09 Score=99.60 Aligned_cols=151 Identities=12% Similarity=0.021 Sum_probs=88.5
Q ss_pred ccCeEEEeeeeeCCCcccccCCCCccccceeEEEeecCCCCC-CCceEEEEecCCCCh--hHHHhhhhchHHHhcCccEE
Q 019962 74 TQTAVLREGVFRTPCDEQLMSALPPESHNARVAFLAPKCVPP-QKMACVVHLAGTGDH--TFERRLRLGGPLLKENIATM 150 (333)
Q Consensus 74 ~~~~~~~~g~F~Sp~~~~~p~~lp~~s~~a~~~~~~p~~~~~-~~~v~viH~aG~Gd~--~~~~r~~la~pL~~~Gi~~i 150 (333)
...+.+..-+|.|| .-.+.-...+++|..... ..|++ +.++|.+.+ .|.+...+.+-+...|+.|+
T Consensus 13 ~~~~~~~~~~~~s~----------~l~~~~~~~vy~P~~~~~~~~Pvv-~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv 81 (283)
T PLN02442 13 MFGGFNRRYKHFSS----------TLGCSMTFSVYFPPASDSGKVPVL-YWLSGLTCTDENFIQKSGAQRAAAARGIALV 81 (283)
T ss_pred ccCCEEEEEEEecc----------ccCCceEEEEEcCCcccCCCCCEE-EEecCCCcChHHHHHhhhHHHHHhhcCeEEE
Confidence 45677788889898 334556778888975432 34553 555566533 34333344444556799999
Q ss_pred EeecccCCCCCCCcccC---c-ccchhhhHHHhh--hhhHH--HHHHHHHHHHH---hcCCCeeeEeeechhHHHHHHhh
Q 019962 151 VLESPFYGQRRPLLQRG---A-KLLCVSDLLLLG--RATIE--EARCLLHWLEW---EAGFGKMGVCGLSMGGVHAAMVG 219 (333)
Q Consensus 151 ll~~Py~G~RkP~~q~~---s-~l~~vsd~~~~g--~~~i~--E~r~ll~wl~~---~~g~~~vgv~G~SMGG~~Asl~A 219 (333)
.++.+++|.+-+-.... . ......|....+ ...+. ....+..+++. ..+.++++|+|.||||++|..+|
T Consensus 82 ~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a 161 (283)
T PLN02442 82 APDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIY 161 (283)
T ss_pred ecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHH
Confidence 99999888552221100 0 000000000000 00000 01233333332 34678999999999999999999
Q ss_pred hcCCCceeeecccCCC
Q 019962 220 SLHPTPVATLPFLSPH 235 (333)
Q Consensus 220 ~~~P~~v~~vp~~~~~ 235 (333)
..+|+.++.+..+++.
T Consensus 162 ~~~p~~~~~~~~~~~~ 177 (283)
T PLN02442 162 LKNPDKYKSVSAFAPI 177 (283)
T ss_pred HhCchhEEEEEEECCc
Confidence 9999988877776654
No 46
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.05 E-value=6.7e-09 Score=97.82 Aligned_cols=151 Identities=11% Similarity=-0.024 Sum_probs=89.0
Q ss_pred cCeEEEeeeeeCCCcccccCCCCccccceeEEEeecCCCCC-CCceEEEEecCCCCh-hHHHhhhhchHHHh-cCccEEE
Q 019962 75 QTAVLREGVFRTPCDEQLMSALPPESHNARVAFLAPKCVPP-QKMACVVHLAGTGDH-TFERRLRLGGPLLK-ENIATMV 151 (333)
Q Consensus 75 ~~~~~~~g~F~Sp~~~~~p~~lp~~s~~a~~~~~~p~~~~~-~~~v~viH~aG~Gd~-~~~~r~~la~pL~~-~Gi~~il 151 (333)
.++++..-+|.|+. .+...+..+++|+.+.+ ..|+ ++.++|.|++ ..|.+......+++ .|+.|+.
T Consensus 9 ~~~~~~~~~~~s~~----------~~~~~~~~v~~P~~~~~~~~P~-vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~ 77 (275)
T TIGR02821 9 FGGTQGFYRHKSET----------CGVPMTFGVFLPPQAAAGPVPV-LWYLSGLTCTHENFMIKAGAQRFAAEHGLALVA 77 (275)
T ss_pred cCCEEEEEEEeccc----------cCCceEEEEEcCCCccCCCCCE-EEEccCCCCCccHHHhhhHHHHHHhhcCcEEEE
Confidence 46778888898883 34566788899987533 3444 3445576643 23322223345554 6999999
Q ss_pred eecccCCCCCCCc--ccC--cccchhhhHH----HhhhhhHHH-HHHHHHHHHHh--cCCCeeeEeeechhHHHHHHhhh
Q 019962 152 LESPFYGQRRPLL--QRG--AKLLCVSDLL----LLGRATIEE-ARCLLHWLEWE--AGFGKMGVCGLSMGGVHAAMVGS 220 (333)
Q Consensus 152 l~~Py~G~RkP~~--q~~--s~l~~vsd~~----~~g~~~i~E-~r~ll~wl~~~--~g~~~vgv~G~SMGG~~Asl~A~ 220 (333)
++.+..|.+.+.. .+. .......|.. ..+...... ++.+..++++. .+.++++|+|.||||++|..+|.
T Consensus 78 Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~ 157 (275)
T TIGR02821 78 PDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIAL 157 (275)
T ss_pred eCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHH
Confidence 9998777664321 000 0000000000 000000111 13445555522 34578999999999999999999
Q ss_pred cCCCceeeecccCCCC
Q 019962 221 LHPTPVATLPFLSPHS 236 (333)
Q Consensus 221 ~~P~~v~~vp~~~~~t 236 (333)
.+|+.+..+.++++.+
T Consensus 158 ~~p~~~~~~~~~~~~~ 173 (275)
T TIGR02821 158 KNPDRFKSVSAFAPIV 173 (275)
T ss_pred hCcccceEEEEECCcc
Confidence 9999888887776654
No 47
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.05 E-value=8.6e-10 Score=99.13 Aligned_cols=97 Identities=15% Similarity=0.136 Sum_probs=68.6
Q ss_pred CceEEEEecCCCChhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHH
Q 019962 117 KMACVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEW 196 (333)
Q Consensus 117 ~~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~ 196 (333)
+++++|| |+|.+.+. ++.++..| ++|+++.+++|+||.+.++.. . ++. .-++.+.+.++
T Consensus 3 p~vvllH--G~~~~~~~-w~~~~~~l--~~~~vi~~D~~G~G~S~~~~~-~----~~~----------~~~~~l~~~l~- 61 (242)
T PRK11126 3 PWLVFLH--GLLGSGQD-WQPVGEAL--PDYPRLYIDLPGHGGSAAISV-D----GFA----------DVSRLLSQTLQ- 61 (242)
T ss_pred CEEEEEC--CCCCChHH-HHHHHHHc--CCCCEEEecCCCCCCCCCccc-c----CHH----------HHHHHHHHHHH-
Confidence 3456666 77755432 22455555 479999999999998854321 1 110 11356777777
Q ss_pred hcCCCeeeEeeechhHHHHHHhhhcCCCc-eeeecccCC
Q 019962 197 EAGFGKMGVCGLSMGGVHAAMVGSLHPTP-VATLPFLSP 234 (333)
Q Consensus 197 ~~g~~~vgv~G~SMGG~~Asl~A~~~P~~-v~~vp~~~~ 234 (333)
+.+.+++.+.|+||||.+|..+|..+|.. +..+.++++
T Consensus 62 ~~~~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~ 100 (242)
T PRK11126 62 SYNILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGG 100 (242)
T ss_pred HcCCCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCC
Confidence 78899999999999999999999998654 777777664
No 48
>PLN02511 hydrolase
Probab=99.04 E-value=4.6e-09 Score=104.17 Aligned_cols=95 Identities=8% Similarity=-0.031 Sum_probs=68.5
Q ss_pred ceEEEEecCCCC-hhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHH
Q 019962 118 MACVVHLAGTGD-HTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEW 196 (333)
Q Consensus 118 ~v~viH~aG~Gd-~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~ 196 (333)
+++++||.+.+. +.|++ .++..+.++||+++.++++.||.......... . .....|.+.++++++.
T Consensus 102 ~vvllHG~~g~s~~~y~~--~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~---~--------~~~~~Dl~~~i~~l~~ 168 (388)
T PLN02511 102 VLILLPGLTGGSDDSYVR--HMLLRARSKGWRVVVFNSRGCADSPVTTPQFY---S--------ASFTGDLRQVVDHVAG 168 (388)
T ss_pred EEEEECCCCCCCCCHHHH--HHHHHHHHCCCEEEEEecCCCCCCCCCCcCEE---c--------CCchHHHHHHHHHHHH
Confidence 455677543332 34554 56777788999999999999998743221110 0 1234577999999985
Q ss_pred hcCCCeeeEeeechhHHHHHHhhhcCCCc
Q 019962 197 EAGFGKMGVCGLSMGGVHAAMVGSLHPTP 225 (333)
Q Consensus 197 ~~g~~~vgv~G~SMGG~~Asl~A~~~P~~ 225 (333)
+.+..++.++|+||||.++...+..+|+.
T Consensus 169 ~~~~~~~~lvG~SlGg~i~~~yl~~~~~~ 197 (388)
T PLN02511 169 RYPSANLYAAGWSLGANILVNYLGEEGEN 197 (388)
T ss_pred HCCCCCEEEEEechhHHHHHHHHHhcCCC
Confidence 44557899999999999999999999874
No 49
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.00 E-value=2.1e-09 Score=104.16 Aligned_cols=113 Identities=21% Similarity=0.214 Sum_probs=73.0
Q ss_pred CceEEEEecCCCChh------------HHHhh-hhchHHHhcCccEEEeeccc--CCCCCCCcccCcccchhhhHHHhhh
Q 019962 117 KMACVVHLAGTGDHT------------FERRL-RLGGPLLKENIATMVLESPF--YGQRRPLLQRGAKLLCVSDLLLLGR 181 (333)
Q Consensus 117 ~~v~viH~aG~Gd~~------------~~~r~-~la~pL~~~Gi~~ill~~Py--~G~RkP~~q~~s~l~~vsd~~~~g~ 181 (333)
++++++| |.+.+. ||..- ..+++|..++|.|+.+++|+ ||+..|......+...-.+...
T Consensus 32 ~~vll~H--g~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~--- 106 (351)
T TIGR01392 32 NAVLVCH--ALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPL--- 106 (351)
T ss_pred CEEEEcC--CcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCC---
Confidence 5666777 666432 45421 12568888999999999999 6766543211111000000000
Q ss_pred hhHHH-HHHHHHHHHHhcCCCe-eeEeeechhHHHHHHhhhcCCCceeeecccCCC
Q 019962 182 ATIEE-ARCLLHWLEWEAGFGK-MGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPH 235 (333)
Q Consensus 182 ~~i~E-~r~ll~wl~~~~g~~~-vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ 235 (333)
-++.+ ++.+...++ +.|.++ +.|+|.||||.+|..+|..+|+.+..+.++++.
T Consensus 107 ~~~~~~~~~~~~~~~-~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (351)
T TIGR01392 107 ITIRDDVKAQKLLLD-HLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATS 161 (351)
T ss_pred CcHHHHHHHHHHHHH-HcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccC
Confidence 01111 244556666 789999 999999999999999999999999888888754
No 50
>PRK11071 esterase YqiA; Provisional
Probab=98.99 E-value=2.9e-09 Score=95.75 Aligned_cols=149 Identities=19% Similarity=0.262 Sum_probs=87.4
Q ss_pred ceEEEEecCCCChhH-HHhhhhchHHHh--cCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHH
Q 019962 118 MACVVHLAGTGDHTF-ERRLRLGGPLLK--ENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWL 194 (333)
Q Consensus 118 ~v~viH~aG~Gd~~~-~~r~~la~pL~~--~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl 194 (333)
++++|| |+|.+.. |....+...+.+ .++.++.+++|.|+. .. +..+.+++
T Consensus 3 ~illlH--Gf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~~------------~~-------------~~~l~~l~ 55 (190)
T PRK11071 3 TLLYLH--GFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYPA------------DA-------------AELLESLV 55 (190)
T ss_pred eEEEEC--CCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCHH------------HH-------------HHHHHHHH
Confidence 455556 7774443 322234444544 389999999998741 01 13445556
Q ss_pred HHhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCccccccccccccCccHHHHHHHHHh-------hhhcCC
Q 019962 195 EWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAVVAFCEGILKHGTAWEALREELAA-------KKVAMT 267 (333)
Q Consensus 195 ~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta~~vfteGvl~~~~~w~~L~~~l~~-------~~~~lt 267 (333)
+ +.+..+++++|.||||.+|..+|..+|.+ +.+++|... + ++.++..+.. +...+|
T Consensus 56 ~-~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~---~vl~~~~~~---~----------~~~~~~~~~~~~~~~~~~~~~~~ 118 (190)
T PRK11071 56 L-EHGGDPLGLVGSSLGGYYATWLSQCFMLP---AVVVNPAVR---P----------FELLTDYLGENENPYTGQQYVLE 118 (190)
T ss_pred H-HcCCCCeEEEEECHHHHHHHHHHHHcCCC---EEEECCCCC---H----------HHHHHHhcCCcccccCCCcEEEc
Confidence 5 78889999999999999999999999842 233433111 1 1111111100 001121
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCCCCCeEEEEEecCCccccchhhHHhhhc
Q 019962 268 LEEVRERMRNVLSLTDVTRFPIPKIPNAVIFVAATVSTVFDYHHEEVLKMD 318 (333)
Q Consensus 268 ~~~a~~rl~~~l~~t~l~nf~~p~dp~~ilvV~g~~D~yVP~~~~~~L~~~ 318 (333)
++.+..+.+. ++.. ...|.++++|.|++|+.||.+.+.++.+.
T Consensus 119 ----~~~~~d~~~~-~~~~---i~~~~~v~iihg~~De~V~~~~a~~~~~~ 161 (190)
T PRK11071 119 ----SRHIYDLKVM-QIDP---LESPDLIWLLQQTGDEVLDYRQAVAYYAA 161 (190)
T ss_pred ----HHHHHHHHhc-CCcc---CCChhhEEEEEeCCCCcCCHHHHHHHHHh
Confidence 2222222211 2211 12466799999999999999999998774
No 51
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=98.96 E-value=1.6e-08 Score=101.60 Aligned_cols=192 Identities=17% Similarity=0.188 Sum_probs=96.5
Q ss_pred EEeecCCCCCCCceEEEEecCCCChhHHHhh-hhchHHHhcCccEEEeecccCCCC--CCCcccCcccchhhhHHHhhhh
Q 019962 106 AFLAPKCVPPQKMACVVHLAGTGDHTFERRL-RLGGPLLKENIATMVLESPFYGQR--RPLLQRGAKLLCVSDLLLLGRA 182 (333)
Q Consensus 106 ~~~~p~~~~~~~~v~viH~aG~Gd~~~~~r~-~la~pL~~~Gi~~ill~~Py~G~R--kP~~q~~s~l~~vsd~~~~g~~ 182 (333)
-+.+|.. ....|+ ||...|. |+.-.... .+.+.++..||+++.+|.|.=|.. -|-.+..+ .-.
T Consensus 180 ~LhlP~~-~~p~P~-VIv~gGl-Ds~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~--~l~--------- 245 (411)
T PF06500_consen 180 YLHLPSG-EKPYPT-VIVCGGL-DSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSS--RLH--------- 245 (411)
T ss_dssp EEEESSS-SS-EEE-EEEE--T-TS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CC--HHH---------
T ss_pred EEEcCCC-CCCCCE-EEEeCCc-chhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHH--HHH---------
Confidence 3446663 223454 4553333 43222222 345568889999999999999875 12211111 111
Q ss_pred hHHHHHHHHHHHHHhcC--CCeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCccccccccccccCccHHHHHHHHH
Q 019962 183 TIEEARCLLHWLEWEAG--FGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAVVAFCEGILKHGTAWEALREELA 260 (333)
Q Consensus 183 ~i~E~r~ll~wl~~~~g--~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta~~vfteGvl~~~~~w~~L~~~l~ 260 (333)
.++++||.+..- ..+|++.|+||||+.|.-+|..++.++..+.++++.. -..|++--.....+. .....++
T Consensus 246 -----~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~v-h~~ft~~~~~~~~P~-my~d~LA 318 (411)
T PF06500_consen 246 -----QAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPV-HHFFTDPEWQQRVPD-MYLDVLA 318 (411)
T ss_dssp -----HHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES----SCGGH-HHHHTTS-H-HHHHHHH
T ss_pred -----HHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchH-hhhhccHHHHhcCCH-HHHHHHH
Confidence 678999984332 3699999999999999999987765666665555432 133442211111211 1122222
Q ss_pred hhhh--cCCHHHHHHHHHHhh-ccCCCCCCCCCCCCCeEEEEEecCCccccchhhHHhhhccc
Q 019962 261 AKKV--AMTLEEVRERMRNVL-SLTDVTRFPIPKIPNAVIFVAATVSTVFDYHHEEVLKMDSQ 320 (333)
Q Consensus 261 ~~~~--~lt~~~a~~rl~~~l-~~t~l~nf~~p~dp~~ilvV~g~~D~yVP~~~~~~L~~~~~ 320 (333)
.... ..+++..+..+...- ...-+++ -...+-++|.|.+++|.+.|.+....+..-+.
T Consensus 319 ~rlG~~~~~~~~l~~el~~~SLk~qGlL~--~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~ 379 (411)
T PF06500_consen 319 SRLGMAAVSDESLRGELNKFSLKTQGLLS--GRRCPTPLLAINGEDDPVSPIEDSRLIAESST 379 (411)
T ss_dssp HHCT-SCE-HHHHHHHGGGGSTTTTTTTT--SS-BSS-EEEEEETT-SSS-HHHHHHHHHTBT
T ss_pred HHhCCccCCHHHHHHHHHhcCcchhcccc--CCCCCcceEEeecCCCCCCCHHHHHHHHhcCC
Confidence 2222 223334434432221 2222321 12223359999999999999999887766543
No 52
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=98.96 E-value=2.4e-09 Score=104.61 Aligned_cols=99 Identities=23% Similarity=0.193 Sum_probs=71.0
Q ss_pred CceEEEEecCCCChh-HHHhhhhchHHHhcCccEEEeecccCCCCC-CCcccCcccchhhhHHHhhhhhHHHHHHHHHHH
Q 019962 117 KMACVVHLAGTGDHT-FERRLRLGGPLLKENIATMVLESPFYGQRR-PLLQRGAKLLCVSDLLLLGRATIEEARCLLHWL 194 (333)
Q Consensus 117 ~~v~viH~aG~Gd~~-~~~r~~la~pL~~~Gi~~ill~~Py~G~Rk-P~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl 194 (333)
+|+++|| |+|.+. .|. .+...|. ++|+|+.+|+|+||.+. |++..++.... +..+.+++
T Consensus 89 p~lvllH--G~~~~~~~w~--~~~~~L~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~--------------a~~l~~~l 149 (360)
T PLN02679 89 PPVLLVH--GFGASIPHWR--RNIGVLA-KNYTVYAIDLLGFGASDKPPGFSYTMETW--------------AELILDFL 149 (360)
T ss_pred CeEEEEC--CCCCCHHHHH--HHHHHHh-cCCEEEEECCCCCCCCCCCCCccccHHHH--------------HHHHHHHH
Confidence 5666777 666443 333 4445554 48999999999999984 43322222222 25677777
Q ss_pred HHhcCCCeeeEeeechhHHHHHHhhh-cCCCceeeecccCCC
Q 019962 195 EWEAGFGKMGVCGLSMGGVHAAMVGS-LHPTPVATLPFLSPH 235 (333)
Q Consensus 195 ~~~~g~~~vgv~G~SMGG~~Asl~A~-~~P~~v~~vp~~~~~ 235 (333)
+ +.+.+++.|+|+||||.+|..+|+ .+|+.+..+.++++.
T Consensus 150 ~-~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~ 190 (360)
T PLN02679 150 E-EVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCA 190 (360)
T ss_pred H-HhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCc
Confidence 7 788999999999999999988887 479999999888754
No 53
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.94 E-value=9.5e-09 Score=92.17 Aligned_cols=162 Identities=14% Similarity=0.117 Sum_probs=93.1
Q ss_pred hhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHHhcCC---CeeeEeeechhHH
Q 019962 137 RLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEWEAGF---GKMGVCGLSMGGV 213 (333)
Q Consensus 137 ~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~~~g~---~~vgv~G~SMGG~ 213 (333)
.....|+++||.|+.++....+.. ++ ...-...--.|...+.|+...++|+. +.+. ++|+|+|.|+||+
T Consensus 5 ~~~~~la~~Gy~v~~~~~rGs~g~---g~----~~~~~~~~~~~~~~~~D~~~~i~~l~-~~~~iD~~ri~i~G~S~GG~ 76 (213)
T PF00326_consen 5 WNAQLLASQGYAVLVPNYRGSGGY---GK----DFHEAGRGDWGQADVDDVVAAIEYLI-KQYYIDPDRIGIMGHSYGGY 76 (213)
T ss_dssp HHHHHHHTTT-EEEEEE-TTSSSS---HH----HHHHTTTTGTTHHHHHHHHHHHHHHH-HTTSEEEEEEEEEEETHHHH
T ss_pred HHHHHHHhCCEEEEEEcCCCCCcc---ch----hHHHhhhccccccchhhHHHHHHHHh-ccccccceeEEEEccccccc
Confidence 345567789999999887665422 10 00011122345567888999999998 4443 9999999999999
Q ss_pred HHHHhhhcCCCceeeecccCCCCccccccccccccCccHHHHHHHHHhhhhcCCHHHHHHHHHHhhccCCCCCCCCCCCC
Q 019962 214 HAAMVGSLHPTPVATLPFLSPHSAVVAFCEGILKHGTAWEALREELAAKKVAMTLEEVRERMRNVLSLTDVTRFPIPKIP 293 (333)
Q Consensus 214 ~Asl~A~~~P~~v~~vp~~~~~ta~~vfteGvl~~~~~w~~L~~~l~~~~~~lt~~~a~~rl~~~l~~t~l~nf~~p~dp 293 (333)
+|++++..+|+....+...++.+.-..+...- .. +...+. ...... ...++..+.+..+...+.+ . ..
T Consensus 77 ~a~~~~~~~~~~f~a~v~~~g~~d~~~~~~~~---~~-~~~~~~-~~~~~~-~~~~~~~~~~s~~~~~~~~---~---~~ 144 (213)
T PF00326_consen 77 LALLAATQHPDRFKAAVAGAGVSDLFSYYGTT---DI-YTKAEY-LEYGDP-WDNPEFYRELSPISPADNV---Q---IK 144 (213)
T ss_dssp HHHHHHHHTCCGSSEEEEESE-SSTTCSBHHT---CC-HHHGHH-HHHSST-TTSHHHHHHHHHGGGGGGC---G---GG
T ss_pred ccchhhcccceeeeeeeccceecchhcccccc---cc-cccccc-cccCcc-chhhhhhhhhccccccccc---c---CC
Confidence 99999999998777666655433322221110 00 111111 111110 0011222222222222222 1 22
Q ss_pred CeEEEEEecCCccccchhhHHhhhc
Q 019962 294 NAVIFVAATVSTVFDYHHEEVLKMD 318 (333)
Q Consensus 294 ~~ilvV~g~~D~yVP~~~~~~L~~~ 318 (333)
-++++++|.+|..||.+++++|.+.
T Consensus 145 ~P~li~hG~~D~~Vp~~~s~~~~~~ 169 (213)
T PF00326_consen 145 PPVLIIHGENDPRVPPSQSLRLYNA 169 (213)
T ss_dssp SEEEEEEETTBSSSTTHHHHHHHHH
T ss_pred CCEEEEccCCCCccCHHHHHHHHHH
Confidence 3599999999999999999988654
No 54
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.93 E-value=5.4e-09 Score=99.23 Aligned_cols=102 Identities=20% Similarity=0.121 Sum_probs=65.8
Q ss_pred CCceEEEEecCCCChhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHH
Q 019962 116 QKMACVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLE 195 (333)
Q Consensus 116 ~~~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~ 195 (333)
.+|++++|| |++.+.++ .+...+...+|+|+.++.|+||++.++..... .+..| .. +.+...++
T Consensus 27 ~~~lvllHG-~~~~~~~~---~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~--~~~~~-------~~---~dl~~l~~ 90 (306)
T TIGR01249 27 GKPVVFLHG-GPGSGTDP---GCRRFFDPETYRIVLFDQRGCGKSTPHACLEE--NTTWD-------LV---ADIEKLRE 90 (306)
T ss_pred CCEEEEECC-CCCCCCCH---HHHhccCccCCEEEEECCCCCCCCCCCCCccc--CCHHH-------HH---HHHHHHHH
Confidence 367777885 23332222 12222334689999999999998865432110 11101 11 22223334
Q ss_pred HhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCC
Q 019962 196 WEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSP 234 (333)
Q Consensus 196 ~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~ 234 (333)
..+.+++.++|.||||.+|..+|..+|+.+..+.++++
T Consensus 91 -~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~ 128 (306)
T TIGR01249 91 -KLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGI 128 (306)
T ss_pred -HcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeecc
Confidence 56788999999999999999999999998888877764
No 55
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=98.92 E-value=1.6e-08 Score=97.49 Aligned_cols=108 Identities=19% Similarity=0.207 Sum_probs=78.8
Q ss_pred CceEEEEecCCCChhHHHhhhhchHHHhcCccEEEeecccCCCCC--CCcccCcccchhhhHHHhhhhhHHHHHHHHHHH
Q 019962 117 KMACVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQRR--PLLQRGAKLLCVSDLLLLGRATIEEARCLLHWL 194 (333)
Q Consensus 117 ~~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~Rk--P~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl 194 (333)
..|+++| |.++|..... .++..|.++||.|+.+|.|+||+++ +.+...+ +.| -+.+..++++-.
T Consensus 35 g~Vvl~H--G~~Eh~~ry~-~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~----f~~-------~~~dl~~~~~~~ 100 (298)
T COG2267 35 GVVVLVH--GLGEHSGRYE-ELADDLAARGFDVYALDLRGHGRSPRGQRGHVDS----FAD-------YVDDLDAFVETI 100 (298)
T ss_pred cEEEEec--CchHHHHHHH-HHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchh----HHH-------HHHHHHHHHHHH
Confidence 4455666 8887765332 5899999999999999999999995 3332222 211 233445566655
Q ss_pred HHhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCcc
Q 019962 195 EWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAV 238 (333)
Q Consensus 195 ~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta~ 238 (333)
.+.....++.|.|+||||.+|...+...+..+..+.+.||.-.-
T Consensus 101 ~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l 144 (298)
T COG2267 101 AEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGL 144 (298)
T ss_pred hccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccC
Confidence 42235799999999999999999999999888888888875553
No 56
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.92 E-value=2.4e-09 Score=105.05 Aligned_cols=109 Identities=22% Similarity=0.251 Sum_probs=80.7
Q ss_pred CCceEEEEecCCCChhHHHhhhhchHHHhcCccEEEeecccCCCC-CCCcccCcccchhhhHHHhhhhhHHHHHHHHHHH
Q 019962 116 QKMACVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQR-RPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWL 194 (333)
Q Consensus 116 ~~~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~R-kP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl 194 (333)
..|+|+|||=|+|- ++|. ++-+.|++ ..+|..+|.|.+|.+ ||+-+..... ....| ..++=.|-
T Consensus 90 ~~plVliHGyGAg~-g~f~--~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~--~e~~f---------vesiE~WR 154 (365)
T KOG4409|consen 90 KTPLVLIHGYGAGL-GLFF--RNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTT--AEKEF---------VESIEQWR 154 (365)
T ss_pred CCcEEEEeccchhH-HHHH--Hhhhhhhh-cCceEEecccCCCCCCCCCCCCCccc--chHHH---------HHHHHHHH
Confidence 36778899555553 4443 22233443 789999999999988 8986543332 11111 25777888
Q ss_pred HHhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCC-CCcccc
Q 019962 195 EWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSP-HSAVVA 240 (333)
Q Consensus 195 ~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~-~ta~~v 240 (333)
. ..|.++..|+|+||||++|+.-|..+|+.|..+++++| +.+...
T Consensus 155 ~-~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~ 200 (365)
T KOG4409|consen 155 K-KMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKP 200 (365)
T ss_pred H-HcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCC
Confidence 8 89999999999999999999999999999999999996 555544
No 57
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.89 E-value=6.6e-09 Score=109.17 Aligned_cols=192 Identities=14% Similarity=0.063 Sum_probs=110.1
Q ss_pred ceeEEEeecCCCCCCC--ce-EEEEecCCCChhHHHhhhhchHHHhcCccEEEeecc---cCCCCCCCcccCcccchhhh
Q 019962 102 NARVAFLAPKCVPPQK--MA-CVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESP---FYGQRRPLLQRGAKLLCVSD 175 (333)
Q Consensus 102 ~a~~~~~~p~~~~~~~--~v-~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~P---y~G~RkP~~q~~s~l~~vsd 175 (333)
+.+..++.|..-.+.+ |+ +.|||.-.+..+|. +..+...|+.+||+|+.+..- +||++ +.-.+
T Consensus 377 ~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~-~~~~~q~~~~~G~~V~~~n~RGS~GyG~~----------F~~~~ 445 (620)
T COG1506 377 TIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYS-FNPEIQVLASAGYAVLAPNYRGSTGYGRE----------FADAI 445 (620)
T ss_pred EEEEEEecCCCCCCCCCCCEEEEeCCCCccccccc-cchhhHHHhcCCeEEEEeCCCCCCccHHH----------HHHhh
Confidence 7778888887765432 44 35553333333332 224678899999999996543 22222 11112
Q ss_pred HHHhhhhhHHHHHHHHHHHHHhcCC---CeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCccccccccccccCccH
Q 019962 176 LLLLGRATIEEARCLLHWLEWEAGF---GKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAVVAFCEGILKHGTAW 252 (333)
Q Consensus 176 ~~~~g~~~i~E~r~ll~wl~~~~g~---~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta~~vfteGvl~~~~~w 252 (333)
.--.|...+.|.-..++|++ +.+. ++++|+|.|.||+|++++++..|+..+.+...++++=-.-+.+--..+...|
T Consensus 446 ~~~~g~~~~~D~~~~~~~l~-~~~~~d~~ri~i~G~SyGGymtl~~~~~~~~f~a~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (620)
T COG1506 446 RGDWGGVDLEDLIAAVDALV-KLPLVDPERIGITGGSYGGYMTLLAATKTPRFKAAVAVAGGVDWLLYFGESTEGLRFDP 524 (620)
T ss_pred hhccCCccHHHHHHHHHHHH-hCCCcChHHeEEeccChHHHHHHHHHhcCchhheEEeccCcchhhhhccccchhhcCCH
Confidence 22345567788888888998 6765 5999999999999999999999976666654332221111110001111111
Q ss_pred HHHHHHHHhhhhcCCHHHHHHHHHHhhccCCCCCCCCCCCCCeEEEEEecCCccccchhhHHhhhcc
Q 019962 253 EALREELAAKKVAMTLEEVRERMRNVLSLTDVTRFPIPKIPNAVIFVAATVSTVFDYHHEEVLKMDS 319 (333)
Q Consensus 253 ~~L~~~l~~~~~~lt~~~a~~rl~~~l~~t~l~nf~~p~dp~~ilvV~g~~D~yVP~~~~~~L~~~~ 319 (333)
+.... .. .. ....+.....+..-...+.| +|+|+|.+|..+|.++++.|.+.-
T Consensus 525 ~~~~~-------~~-~~----~~~~~~~~sp~~~~~~i~~P--~LliHG~~D~~v~~~q~~~~~~aL 577 (620)
T COG1506 525 EENGG-------GP-PE----DREKYEDRSPIFYADNIKTP--LLLIHGEEDDRVPIEQAEQLVDAL 577 (620)
T ss_pred HHhCC-------Cc-cc----ChHHHHhcChhhhhcccCCC--EEEEeecCCccCChHHHHHHHHHH
Confidence 11110 00 00 01112223322222334556 999999999999999999887643
No 58
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.86 E-value=2.9e-08 Score=95.90 Aligned_cols=186 Identities=17% Similarity=0.161 Sum_probs=108.0
Q ss_pred ceEEEEecCCCChhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHH-
Q 019962 118 MACVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEW- 196 (333)
Q Consensus 118 ~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~- 196 (333)
.++++| |.|.+.=|+...+|..|++.||+|..+|-.+||.+.-..- ...++ |. .+.++-...+....
T Consensus 56 lv~~~H--G~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~---yi~~~-d~------~v~D~~~~~~~i~~~ 123 (313)
T KOG1455|consen 56 LVFLCH--GYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHA---YVPSF-DL------VVDDVISFFDSIKER 123 (313)
T ss_pred EEEEEc--CCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcc---cCCcH-HH------HHHHHHHHHHHHhhc
Confidence 345566 9997765555579999999999999999999999852211 01111 11 13344444554332
Q ss_pred -hcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCc-cccc-ccc-------ccc-cCccHHHHHH--------
Q 019962 197 -EAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSA-VVAF-CEG-------ILK-HGTAWEALRE-------- 257 (333)
Q Consensus 197 -~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta-~~vf-teG-------vl~-~~~~w~~L~~-------- 257 (333)
+..--+..+.|.||||++|.+++..+|....-+.++||..- ...+ ... .++ .-+.|.....
T Consensus 124 ~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~liP~wk~vp~~d~~~~~~ 203 (313)
T KOG1455|consen 124 EENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTLLSKLIPTWKIVPTKDIIDVAF 203 (313)
T ss_pred cccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHHHHHhCCceeecCCcccccccc
Confidence 33458899999999999999999999986666666665332 2111 000 111 1333431111
Q ss_pred -------HHHhhhh----cCCHHHHHHHHHHhhccCCCCCCCCCCCCCeEEEEEecCCccccchhhHHhhhcc
Q 019962 258 -------ELAAKKV----AMTLEEVRERMRNVLSLTDVTRFPIPKIPNAVIFVAATVSTVFDYHHEEVLKMDS 319 (333)
Q Consensus 258 -------~l~~~~~----~lt~~~a~~rl~~~l~~t~l~nf~~p~dp~~ilvV~g~~D~yVP~~~~~~L~~~~ 319 (333)
....++. ......+.|.|+... ++++-...+. -+.++++|++|.+..++.++.|-++.
T Consensus 204 kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~---~le~~l~~vt-vPflilHG~dD~VTDp~~Sk~Lye~A 272 (313)
T KOG1455|consen 204 KDPEKRKILRSDPLCYTGKPRLKTAYELLRVTA---DLEKNLNEVT-VPFLILHGTDDKVTDPKVSKELYEKA 272 (313)
T ss_pred CCHHHHHHhhcCCceecCCccHHHHHHHHHHHH---HHHHhccccc-ccEEEEecCCCcccCcHHHHHHHHhc
Confidence 0011111 011133344444433 1111112233 13999999999999999999997753
No 59
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.86 E-value=1.9e-08 Score=99.08 Aligned_cols=85 Identities=19% Similarity=0.225 Sum_probs=60.1
Q ss_pred hHHHhcCccEEEeeccc--CCCCCCCccc------Ccc---cchhhhHHHhhhhhHHHHHHHHHHHHHhcCCCee-eEee
Q 019962 140 GPLLKENIATMVLESPF--YGQRRPLLQR------GAK---LLCVSDLLLLGRATIEEARCLLHWLEWEAGFGKM-GVCG 207 (333)
Q Consensus 140 ~pL~~~Gi~~ill~~Py--~G~RkP~~q~------~s~---l~~vsd~~~~g~~~i~E~r~ll~wl~~~~g~~~v-gv~G 207 (333)
.++..++|+|+.++.|. +|+..|..-. +.. ..++.| =++.+.+.++ ++|.+++ .|+|
T Consensus 85 ~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~-~l~~~~~~~lvG 153 (379)
T PRK00175 85 KPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVITIRD----------WVRAQARLLD-ALGITRLAAVVG 153 (379)
T ss_pred CccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHH----------HHHHHHHHHH-HhCCCCceEEEE
Confidence 46767899999999998 3443443100 000 011111 1256677777 7899994 8999
Q ss_pred echhHHHHHHhhhcCCCceeeecccCCC
Q 019962 208 LSMGGVHAAMVGSLHPTPVATLPFLSPH 235 (333)
Q Consensus 208 ~SMGG~~Asl~A~~~P~~v~~vp~~~~~ 235 (333)
+||||.+|..+|..+|+.+..+.++++.
T Consensus 154 ~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 181 (379)
T PRK00175 154 GSMGGMQALEWAIDYPDRVRSALVIASS 181 (379)
T ss_pred ECHHHHHHHHHHHhChHhhhEEEEECCC
Confidence 9999999999999999999999888743
No 60
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=98.85 E-value=4.9e-08 Score=88.15 Aligned_cols=119 Identities=20% Similarity=0.285 Sum_probs=71.0
Q ss_pred EeecCCCCCCCceEEEEecCCCChhHHHhhhhchHHHhcCccEEEeecccCCCC-CCCcccCcccchhhhHHHhh-hhhH
Q 019962 107 FLAPKCVPPQKMACVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQR-RPLLQRGAKLLCVSDLLLLG-RATI 184 (333)
Q Consensus 107 ~~~p~~~~~~~~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~R-kP~~q~~s~l~~vsd~~~~g-~~~i 184 (333)
+..|+.-.+.+.+++||- -+|-..+ -+.+|+.|+++||.|+.+++ |+|.. .|... .........++... ....
T Consensus 5 ~~~P~~~~~~~~Vvv~~d-~~G~~~~--~~~~ad~lA~~Gy~v~~pD~-f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 79 (218)
T PF01738_consen 5 VARPEGGGPRPAVVVIHD-IFGLNPN--IRDLADRLAEEGYVVLAPDL-FGGRGAPPSDP-EEAFAAMRELFAPRPEQVA 79 (218)
T ss_dssp EEEETTSSSEEEEEEE-B-TTBS-HH--HHHHHHHHHHTT-EEEEE-C-CCCTS--CCCH-HCHHHHHHHCHHHSHHHHH
T ss_pred EEeCCCCCCCCEEEEEcC-CCCCchH--HHHHHHHHHhcCCCEEeccc-ccCCCCCccch-hhHHHHHHHHHhhhHHHHH
Confidence 456766423344556662 2232222 22699999999999999876 55555 23321 11111111111111 2345
Q ss_pred HHHHHHHHHHHHhcC---CCeeeEeeechhHHHHHHhhhcCCCceeeecc
Q 019962 185 EEARCLLHWLEWEAG---FGKMGVCGLSMGGVHAAMVGSLHPTPVATLPF 231 (333)
Q Consensus 185 ~E~r~ll~wl~~~~g---~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~ 231 (333)
.++...++||+ +.+ .++|+++|.|+||..|..+|+..|+..+.+..
T Consensus 80 ~~~~aa~~~l~-~~~~~~~~kig~vGfc~GG~~a~~~a~~~~~~~a~v~~ 128 (218)
T PF01738_consen 80 ADLQAAVDYLR-AQPEVDPGKIGVVGFCWGGKLALLLAARDPRVDAAVSF 128 (218)
T ss_dssp HHHHHHHHHHH-CTTTCEEEEEEEEEETHHHHHHHHHHCCTTTSSEEEEE
T ss_pred HHHHHHHHHHH-hccccCCCcEEEEEEecchHHhhhhhhhccccceEEEE
Confidence 66789999999 454 58999999999999999999988766555543
No 61
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.85 E-value=5.9e-08 Score=94.22 Aligned_cols=80 Identities=18% Similarity=0.101 Sum_probs=52.6
Q ss_pred hhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHHh-------------------
Q 019962 137 RLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEWE------------------- 197 (333)
Q Consensus 137 ~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~~------------------- 197 (333)
.++..|.++||+|+.+|.++||+.............+. ..+.|+..+++.++++
T Consensus 65 ~~~~~l~~~G~~V~~~D~rGHG~S~~~~~~~g~~~~~~-------~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (332)
T TIGR01607 65 SWIENFNKNGYSVYGLDLQGHGESDGLQNLRGHINCFD-------DLVYDVIQYMNRINDSIILENETKSDDESYDIVNT 137 (332)
T ss_pred HHHHHHHHCCCcEEEecccccCCCccccccccchhhHH-------HHHHHHHHHHHHhhhhhcccccccccccccccccc
Confidence 47889999999999999999997642211111111221 1244555666655410
Q ss_pred cC-CCeeeEeeechhHHHHHHhhhcCC
Q 019962 198 AG-FGKMGVCGLSMGGVHAAMVGSLHP 223 (333)
Q Consensus 198 ~g-~~~vgv~G~SMGG~~Asl~A~~~P 223 (333)
.. ..|+.|.|+||||.++..++...+
T Consensus 138 ~~~~~p~~l~GhSmGg~i~~~~~~~~~ 164 (332)
T TIGR01607 138 KENRLPMYIIGLSMGGNIALRLLELLG 164 (332)
T ss_pred ccCCCceeEeeccCccHHHHHHHHHhc
Confidence 11 358999999999999999876543
No 62
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=98.83 E-value=1.7e-08 Score=100.62 Aligned_cols=104 Identities=21% Similarity=0.288 Sum_probs=71.8
Q ss_pred CCceEEEEecCCCC-hhHHHhhhhchHHHhcCccEEEeecccCCCC-CCCcccCcccchhhhHHHhhhhhHHHHHHHHHH
Q 019962 116 QKMACVVHLAGTGD-HTFERRLRLGGPLLKENIATMVLESPFYGQR-RPLLQRGAKLLCVSDLLLLGRATIEEARCLLHW 193 (333)
Q Consensus 116 ~~~v~viH~aG~Gd-~~~~~r~~la~pL~~~Gi~~ill~~Py~G~R-kP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~w 193 (333)
.++++++| |+|. +.+|. ..+..|.+ +|+|+.++.|.||.+ +|+... .......|.+ +..+.+|
T Consensus 105 ~p~vvllH--G~~~~~~~~~--~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~-~~~~~~~~~~---------~~~i~~~ 169 (402)
T PLN02894 105 APTLVMVH--GYGASQGFFF--RNFDALAS-RFRVIAIDQLGWGGSSRPDFTC-KSTEETEAWF---------IDSFEEW 169 (402)
T ss_pred CCEEEEEC--CCCcchhHHH--HHHHHHHh-CCEEEEECCCCCCCCCCCCccc-ccHHHHHHHH---------HHHHHHH
Confidence 35666777 5553 33443 34455554 699999999999987 443211 1111111111 1456688
Q ss_pred HHHhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCC
Q 019962 194 LEWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPH 235 (333)
Q Consensus 194 l~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ 235 (333)
++ ..+.+++.|+|+||||++|..+|..+|+.+..++++++.
T Consensus 170 ~~-~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~ 210 (402)
T PLN02894 170 RK-AKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPA 210 (402)
T ss_pred HH-HcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCc
Confidence 87 789999999999999999999999999999888888754
No 63
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=98.82 E-value=3e-08 Score=93.37 Aligned_cols=104 Identities=15% Similarity=0.096 Sum_probs=72.8
Q ss_pred CceEEEEecCCCCh-hHHH-hhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHH
Q 019962 117 KMACVVHLAGTGDH-TFER-RLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWL 194 (333)
Q Consensus 117 ~~v~viH~aG~Gd~-~~~~-r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl 194 (333)
+++++||+ |++.+ +.++ ...+++.|+++||+++.+++|+||++.+.. .... ....|+.+.++++
T Consensus 27 ~~vv~i~g-g~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~------~~~~-------~~~~d~~~~~~~l 92 (274)
T TIGR03100 27 TGVLIVVG-GPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN------LGFE-------GIDADIAAAIDAF 92 (274)
T ss_pred CeEEEEeC-CccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC------CCHH-------HHHHHHHHHHHHH
Confidence 56666773 33322 2332 236899999999999999999999875331 1111 2346778889999
Q ss_pred HHhc-CCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCC
Q 019962 195 EWEA-GFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPH 235 (333)
Q Consensus 195 ~~~~-g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ 235 (333)
+++. |++++++.|+||||.+|.++|...+ .+..+.+++|.
T Consensus 93 ~~~~~g~~~i~l~G~S~Gg~~a~~~a~~~~-~v~~lil~~p~ 133 (274)
T TIGR03100 93 REAAPHLRRIVAWGLCDAASAALLYAPADL-RVAGLVLLNPW 133 (274)
T ss_pred HhhCCCCCcEEEEEECHHHHHHHHHhhhCC-CccEEEEECCc
Confidence 7332 7899999999999999999887654 56666666653
No 64
>PRK05855 short chain dehydrogenase; Validated
Probab=98.74 E-value=9e-08 Score=96.85 Aligned_cols=85 Identities=11% Similarity=0.065 Sum_probs=55.2
Q ss_pred CceEEEEecCCCChh-HHHhhhhchHHHhcCccEEEeecccCCCCC-CCcc-cCcccchhhhHHHhhhhhHHHHHHHHHH
Q 019962 117 KMACVVHLAGTGDHT-FERRLRLGGPLLKENIATMVLESPFYGQRR-PLLQ-RGAKLLCVSDLLLLGRATIEEARCLLHW 193 (333)
Q Consensus 117 ~~v~viH~aG~Gd~~-~~~r~~la~pL~~~Gi~~ill~~Py~G~Rk-P~~q-~~s~l~~vsd~~~~g~~~i~E~r~ll~w 193 (333)
++++++| |++.+. +|. .+...| .+||+|+.+|.|+||.+. |... .++.... +..+.+.
T Consensus 26 ~~ivllH--G~~~~~~~w~--~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~--------------a~dl~~~ 86 (582)
T PRK05855 26 PTVVLVH--GYPDNHEVWD--GVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAYTLARL--------------ADDFAAV 86 (582)
T ss_pred CeEEEEc--CCCchHHHHH--HHHHHh-hcceEEEEecCCCCCCCCCCCcccccCHHHH--------------HHHHHHH
Confidence 5666677 666443 343 455555 679999999999999884 3322 1111111 2445555
Q ss_pred HHHhcCCCe-eeEeeechhHHHHHHhhhc
Q 019962 194 LEWEAGFGK-MGVCGLSMGGVHAAMVGSL 221 (333)
Q Consensus 194 l~~~~g~~~-vgv~G~SMGG~~Asl~A~~ 221 (333)
++ ..+.++ +.|+|+||||.+|..++..
T Consensus 87 i~-~l~~~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 87 ID-AVSPDRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred HH-HhCCCCcEEEEecChHHHHHHHHHhC
Confidence 55 455554 9999999999888777665
No 65
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.70 E-value=4.9e-07 Score=84.52 Aligned_cols=125 Identities=16% Similarity=0.124 Sum_probs=78.5
Q ss_pred cceeEEEeecCCCCCCCceEEEEecCCC-ChhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcc-cCcccchhhhHHH
Q 019962 101 HNARVAFLAPKCVPPQKMACVVHLAGTG-DHTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQ-RGAKLLCVSDLLL 178 (333)
Q Consensus 101 ~~a~~~~~~p~~~~~~~~v~viH~aG~G-d~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q-~~s~l~~vsd~~~ 178 (333)
......+..|+.-.+.+-|+++| +.. -+.+.+ .+|+.|+++||.++.+++=+-..+.+... ........ +...
T Consensus 12 ~~~~~~~a~P~~~~~~P~VIv~h--ei~Gl~~~i~--~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~-~~~~ 86 (236)
T COG0412 12 GELPAYLARPAGAGGFPGVIVLH--EIFGLNPHIR--DVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETG-LVER 86 (236)
T ss_pred ceEeEEEecCCcCCCCCEEEEEe--cccCCchHHH--HHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhh-hhcc
Confidence 34445555676643334455677 443 333333 79999999999999987632211111111 11111110 1111
Q ss_pred h-hhhhHHHHHHHHHHHHHhcC---CCeeeEeeechhHHHHHHhhhcCCCceeeecc
Q 019962 179 L-GRATIEEARCLLHWLEWEAG---FGKMGVCGLSMGGVHAAMVGSLHPTPVATLPF 231 (333)
Q Consensus 179 ~-g~~~i~E~r~ll~wl~~~~g---~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~ 231 (333)
. -...+.++.+.++||+ +++ ..+|+++|.||||.+|.++|+..|+..+.+++
T Consensus 87 ~~~~~~~~d~~a~~~~L~-~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~v~a~v~f 142 (236)
T COG0412 87 VDPAEVLADIDAALDYLA-RQPQVDPKRIGVVGFCMGGGLALLAATRAPEVKAAVAF 142 (236)
T ss_pred CCHHHHHHHHHHHHHHHH-hCCCCCCceEEEEEEcccHHHHHHhhcccCCccEEEEe
Confidence 1 1456888999999998 666 58899999999999999999999966555544
No 66
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.70 E-value=4.7e-07 Score=94.09 Aligned_cols=119 Identities=12% Similarity=0.073 Sum_probs=77.3
Q ss_pred cceeEEEeecCCCC-CCCceEEEEecCCCChhHHH--h--hhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhh
Q 019962 101 HNARVAFLAPKCVP-PQKMACVVHLAGTGDHTFER--R--LRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSD 175 (333)
Q Consensus 101 ~~a~~~~~~p~~~~-~~~~v~viH~aG~Gd~~~~~--r--~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd 175 (333)
...+.--|.|..-. +.+|+++|| |.....|-. + +.+++.|+++|++|++++.+.+|.+... ....|
T Consensus 172 ~~~eLi~Y~P~t~~~~~~PlLiVp--~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~-------~~~dd 242 (532)
T TIGR01838 172 ELFQLIQYEPTTETVHKTPLLIVP--PWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQAD-------KTFDD 242 (532)
T ss_pred CcEEEEEeCCCCCcCCCCcEEEEC--cccccceeeecccchHHHHHHHHCCcEEEEEECCCCCccccc-------CChhh
Confidence 33344444565422 567887788 566555532 1 2589999999999999999998866211 11112
Q ss_pred HHHhhhhhHHHHHHHHHHHHHhcCCCeeeEeeechhHHHHHH----hhhcC-CCceeeecccCC
Q 019962 176 LLLLGRATIEEARCLLHWLEWEAGFGKMGVCGLSMGGVHAAM----VGSLH-PTPVATLPFLSP 234 (333)
Q Consensus 176 ~~~~g~~~i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl----~A~~~-P~~v~~vp~~~~ 234 (333)
+..- .....++.+.+..|.++++++|+||||.++++ +++.. |+++..+++++.
T Consensus 243 Y~~~------~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t 300 (532)
T TIGR01838 243 YIRD------GVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTT 300 (532)
T ss_pred hHHH------HHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEec
Confidence 2211 13445555554679999999999999998643 34554 777888887774
No 67
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=98.69 E-value=2.6e-07 Score=90.13 Aligned_cols=111 Identities=17% Similarity=0.099 Sum_probs=84.4
Q ss_pred cCCCCCCCceEEEEecCCCChhHHHhhhhchHHHhcCccEEEeecccCCCC-CCCc-ccCcccchhhhHHHhhhhhHHHH
Q 019962 110 PKCVPPQKMACVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQR-RPLL-QRGAKLLCVSDLLLLGRATIEEA 187 (333)
Q Consensus 110 p~~~~~~~~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~R-kP~~-q~~s~l~~vsd~~~~g~~~i~E~ 187 (333)
+.+++.+.|++ +.++|+-+.-|.-| ....-|...||+++.+|+.+||.+ +|+. ..++...-+
T Consensus 37 ~e~g~~~gP~i-lllHGfPe~wyswr-~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~-------------- 100 (322)
T KOG4178|consen 37 VEGGPGDGPIV-LLLHGFPESWYSWR-HQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELV-------------- 100 (322)
T ss_pred EeecCCCCCEE-EEEccCCccchhhh-hhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHH--------------
Confidence 44466666653 56669998877654 344556678999999999999999 6665 233333222
Q ss_pred HHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCc
Q 019962 188 RCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSA 237 (333)
Q Consensus 188 r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta 237 (333)
..+..+++ .+|..++.|.|+++|+.+|--+|.-+|+.+..+.+++....
T Consensus 101 ~di~~lld-~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~ 149 (322)
T KOG4178|consen 101 GDIVALLD-HLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP 149 (322)
T ss_pred HHHHHHHH-HhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC
Confidence 56677777 78999999999999999999999999999999988885443
No 68
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.66 E-value=2.1e-07 Score=107.56 Aligned_cols=101 Identities=18% Similarity=0.136 Sum_probs=68.4
Q ss_pred CceEEEEecCCCCh-hHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccC----cccchhhhHHHhhhhhHHH-HHHH
Q 019962 117 KMACVVHLAGTGDH-TFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRG----AKLLCVSDLLLLGRATIEE-ARCL 190 (333)
Q Consensus 117 ~~v~viH~aG~Gd~-~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~----s~l~~vsd~~~~g~~~i~E-~r~l 190 (333)
+++++|| |+|.+ ..|. .+...|. .+|+++.++.|+||.+....... ....++ .+ +..+
T Consensus 1372 ~~vVllH--G~~~s~~~w~--~~~~~L~-~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si-----------~~~a~~l 1435 (1655)
T PLN02980 1372 SVVLFLH--GFLGTGEDWI--PIMKAIS-GSARCISIDLPGHGGSKIQNHAKETQTEPTLSV-----------ELVADLL 1435 (1655)
T ss_pred CeEEEEC--CCCCCHHHHH--HHHHHHh-CCCEEEEEcCCCCCCCCCccccccccccccCCH-----------HHHHHHH
Confidence 4555666 66644 3343 4555554 46999999999999884322100 001111 11 1234
Q ss_pred HHHHHHhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCC
Q 019962 191 LHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSP 234 (333)
Q Consensus 191 l~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~ 234 (333)
...++ +.+.+++.|+|+||||.+|..+|..+|+.+..+.++++
T Consensus 1436 ~~ll~-~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~ 1478 (1655)
T PLN02980 1436 YKLIE-HITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISG 1478 (1655)
T ss_pred HHHHH-HhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECC
Confidence 45566 67889999999999999999999999999988888764
No 69
>PRK11460 putative hydrolase; Provisional
Probab=98.65 E-value=8.2e-07 Score=82.08 Aligned_cols=85 Identities=14% Similarity=0.177 Sum_probs=57.6
Q ss_pred HHHHHHHHHHhcCC--CeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCccccccccccccCccHHHHHHHHHhhhh
Q 019962 187 ARCLLHWLEWEAGF--GKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAVVAFCEGILKHGTAWEALREELAAKKV 264 (333)
Q Consensus 187 ~r~ll~wl~~~~g~--~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta~~vfteGvl~~~~~w~~L~~~l~~~~~ 264 (333)
....++++.++.+. .+|+|+|+||||.+|..++...|+.++.+..+++. +. .+..
T Consensus 87 l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~----------~~------~~~~------- 143 (232)
T PRK11460 87 FIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGR----------YA------SLPE------- 143 (232)
T ss_pred HHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccc----------cc------cccc-------
Confidence 34455666545554 68999999999999999999999877755444321 10 0000
Q ss_pred cCCHHHHHHHHHHhhccCCCCCCCCCCCCCeEEEEEecCCccccchhhHHhhhc
Q 019962 265 AMTLEEVRERMRNVLSLTDVTRFPIPKIPNAVIFVAATVSTVFDYHHEEVLKMD 318 (333)
Q Consensus 265 ~lt~~~a~~rl~~~l~~t~l~nf~~p~dp~~ilvV~g~~D~yVP~~~~~~L~~~ 318 (333)
.+....+++++.|++|..||.+.++.+.+.
T Consensus 144 ------------------------~~~~~~pvli~hG~~D~vvp~~~~~~~~~~ 173 (232)
T PRK11460 144 ------------------------TAPTATTIHLIHGGEDPVIDVAHAVAAQEA 173 (232)
T ss_pred ------------------------cccCCCcEEEEecCCCCccCHHHHHHHHHH
Confidence 001123589999999999999998876653
No 70
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.61 E-value=5.8e-07 Score=81.57 Aligned_cols=77 Identities=17% Similarity=0.160 Sum_probs=51.9
Q ss_pred CCeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCccccccccccccCccHHHHHHHHHhhhhcCCHHHHHHHHHHhh
Q 019962 200 FGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAVVAFCEGILKHGTAWEALREELAAKKVAMTLEEVRERMRNVL 279 (333)
Q Consensus 200 ~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta~~vfteGvl~~~~~w~~L~~~l~~~~~~lt~~~a~~rl~~~l 279 (333)
..+|.+.|+|.||.||..++..+|++++.+.++|+... ....++
T Consensus 104 ~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~----------~~~~~~-------------------------- 147 (216)
T PF02230_consen 104 PSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLP----------PESELE-------------------------- 147 (216)
T ss_dssp GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---T----------TGCCCH--------------------------
T ss_pred hhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccc----------cccccc--------------------------
Confidence 37899999999999999999999998888877653221 100000
Q ss_pred ccCCCCCCCCCCCCCeEEEEEecCCccccchhhHHhhhc
Q 019962 280 SLTDVTRFPIPKIPNAVIFVAATVSTVFDYHHEEVLKMD 318 (333)
Q Consensus 280 ~~t~l~nf~~p~dp~~ilvV~g~~D~yVP~~~~~~L~~~ 318 (333)
+-......-+++++.|++|.+||.+.++.+.+.
T Consensus 148 ------~~~~~~~~~pi~~~hG~~D~vvp~~~~~~~~~~ 180 (216)
T PF02230_consen 148 ------DRPEALAKTPILIIHGDEDPVVPFEWAEKTAEF 180 (216)
T ss_dssp ------CCHCCCCTS-EEEEEETT-SSSTHHHHHHHHHH
T ss_pred ------ccccccCCCcEEEEecCCCCcccHHHHHHHHHH
Confidence 000111123599999999999999888776654
No 71
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.60 E-value=1.9e-07 Score=94.87 Aligned_cols=107 Identities=21% Similarity=0.296 Sum_probs=73.6
Q ss_pred CceEEEEecCCCChh-HHHhh-hhchHHHh--cCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHH
Q 019962 117 KMACVVHLAGTGDHT-FERRL-RLGGPLLK--ENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLH 192 (333)
Q Consensus 117 ~~v~viH~aG~Gd~~-~~~r~-~la~pL~~--~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~ 192 (333)
+|+++|| |+++++ +..+. .++..|.+ ..++||.+|.|.+|....+ +.. .+. ...-.+...+++
T Consensus 42 ptvIlIH--G~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~-~a~---~~t-------~~vg~~la~lI~ 108 (442)
T TIGR03230 42 KTFIVIH--GWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYP-TSA---AYT-------KLVGKDVAKFVN 108 (442)
T ss_pred CeEEEEC--CCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCc-ccc---ccH-------HHHHHHHHHHHH
Confidence 5556777 777654 32222 46666664 3699999999999865221 100 111 011134577888
Q ss_pred HHHHhcC--CCeeeEeeechhHHHHHHhhhcCCCceeeecccCCCC
Q 019962 193 WLEWEAG--FGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHS 236 (333)
Q Consensus 193 wl~~~~g--~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~t 236 (333)
+|.++.| .++++|+|+||||++|..+|...|..+..+..+.|..
T Consensus 109 ~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAg 154 (442)
T TIGR03230 109 WMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAG 154 (442)
T ss_pred HHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCC
Confidence 8863344 6899999999999999999999999999998888643
No 72
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.58 E-value=6.1e-07 Score=83.51 Aligned_cols=191 Identities=19% Similarity=0.186 Sum_probs=103.3
Q ss_pred EEEeecCCCCCCCceEEEEecCCCChh--HHHhhhhchHHHh-cCccEEEeecccCCCCCCCcccCcccchhhhHHHhhh
Q 019962 105 VAFLAPKCVPPQKMACVVHLAGTGDHT--FERRLRLGGPLLK-ENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGR 181 (333)
Q Consensus 105 ~~~~~p~~~~~~~~v~viH~aG~Gd~~--~~~r~~la~pL~~-~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~ 181 (333)
.++++|..-+..+.++|+.+||.|.++ |.....+ ..|++ +|+-++.++-..-. ..+ .+.....+.-.-|.
T Consensus 3 Y~lYvP~~~~~~~~PLVv~LHG~~~~a~~~~~~s~~-~~lAd~~GfivvyP~~~~~~----~~~--~cw~w~~~~~~~g~ 75 (220)
T PF10503_consen 3 YRLYVPPGAPRGPVPLVVVLHGCGQSAEDFAAGSGW-NALADREGFIVVYPEQSRRA----NPQ--GCWNWFSDDQQRGG 75 (220)
T ss_pred EEEecCCCCCCCCCCEEEEeCCCCCCHHHHHhhcCH-HHHhhcCCeEEEcccccccC----CCC--CcccccccccccCc
Confidence 457788764432333456666777554 4433234 34665 69999998864321 100 00000001111122
Q ss_pred hhHHHHHHHHHHHHHhcCC--CeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCccccccccccccCccHHHHHHHH
Q 019962 182 ATIEEARCLLHWLEWEAGF--GKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAVVAFCEGILKHGTAWEALREEL 259 (333)
Q Consensus 182 ~~i~E~r~ll~wl~~~~g~--~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta~~vfteGvl~~~~~w~~L~~~l 259 (333)
..+.-+..+++++..+.++ .||.++|+|.||.||..+|+.+|+..+.+-.+|+.-.... ... .+ +++.+.+
T Consensus 76 ~d~~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a-~~~-~~---a~~~m~~-- 148 (220)
T PF10503_consen 76 GDVAFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCA-ASG-AS---ALSAMRS-- 148 (220)
T ss_pred cchhhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccccc-cCc-cc---HHHHhhC--
Confidence 2333347778888754444 7999999999999999999999998888776664322111 111 10 1111111
Q ss_pred HhhhhcCCHHHHHHHHHHhhccCCCCCCCCCCCCCeEEEEEecCCccccchhhHHhhhcccch
Q 019962 260 AAKKVAMTLEEVRERMRNVLSLTDVTRFPIPKIPNAVIFVAATVSTVFDYHHEEVLKMDSQHF 322 (333)
Q Consensus 260 ~~~~~~lt~~~a~~rl~~~l~~t~l~nf~~p~dp~~ilvV~g~~D~yVP~~~~~~L~~~~~~~ 322 (333)
... .+..... ...... ..++. .| +++++|+.|..|.+..+..+.+|=...
T Consensus 149 --g~~-~~p~~~~---~a~~~~---g~~~~--~P--~~v~hG~~D~tV~~~n~~~~~~q~~~~ 198 (220)
T PF10503_consen 149 --GPR-PAPAAAW---GARSDA---GAYPG--YP--RIVFHGTADTTVNPQNADQLVAQWLNV 198 (220)
T ss_pred --CCC-CChHHHH---Hhhhhc---cCCCC--CC--EEEEecCCCCccCcchHHHHHHHHHHc
Confidence 000 0001111 111100 11221 24 678999999999999999888764443
No 73
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.57 E-value=1.7e-07 Score=89.24 Aligned_cols=106 Identities=17% Similarity=0.166 Sum_probs=70.0
Q ss_pred CceEEEEecCCCChh--HHHhhhhchHHHh-cCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHH
Q 019962 117 KMACVVHLAGTGDHT--FERRLRLGGPLLK-ENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHW 193 (333)
Q Consensus 117 ~~v~viH~aG~Gd~~--~~~r~~la~pL~~-~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~w 193 (333)
+++++|| |++++. -|. ..+++.+++ .+++|+.++.+.++. +.. . ..+.+. .....+...++++
T Consensus 37 p~vilIH--G~~~~~~~~~~-~~l~~~ll~~~~~nVi~vD~~~~~~--~~y---~--~a~~~~----~~v~~~la~~l~~ 102 (275)
T cd00707 37 PTRFIIH--GWTSSGEESWI-SDLRKAYLSRGDYNVIVVDWGRGAN--PNY---P--QAVNNT----RVVGAELAKFLDF 102 (275)
T ss_pred CcEEEEc--CCCCCCCCcHH-HHHHHHHHhcCCCEEEEEECccccc--cCh---H--HHHHhH----HHHHHHHHHHHHH
Confidence 5566788 666443 222 257777776 689999999887622 111 0 000000 0112345677777
Q ss_pred HHHh--cCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCCC
Q 019962 194 LEWE--AGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHS 236 (333)
Q Consensus 194 l~~~--~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~t 236 (333)
+.++ .+.++++|+|+||||++|..+|...|+.++.+..+.|..
T Consensus 103 L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~ 147 (275)
T cd00707 103 LVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAG 147 (275)
T ss_pred HHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCc
Confidence 7633 245899999999999999999999999899998887654
No 74
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=98.56 E-value=3.6e-07 Score=94.54 Aligned_cols=117 Identities=14% Similarity=0.134 Sum_probs=79.8
Q ss_pred eeEEEeecCCCCCCCceEEEEecCCCChhH--H-HhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHh
Q 019962 103 ARVAFLAPKCVPPQKMACVVHLAGTGDHTF--E-RRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLL 179 (333)
Q Consensus 103 a~~~~~~p~~~~~~~~v~viH~aG~Gd~~~--~-~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~ 179 (333)
-+..+++|+.- ...|+| |+.+|.|.+.. + .....+..|+++||+|+.++..++|.+.-.....
T Consensus 9 L~~~~~~P~~~-~~~P~I-l~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~------------ 74 (550)
T TIGR00976 9 LAIDVYRPAGG-GPVPVI-LSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLL------------ 74 (550)
T ss_pred EEEEEEecCCC-CCCCEE-EEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEec------------
Confidence 45567788752 234543 55568875431 1 1113566788899999999999999885332111
Q ss_pred hhhhHHHHHHHHHHHHHhcC--CCeeeEeeechhHHHHHHhhhcCCCce-eeecccCC
Q 019962 180 GRATIEEARCLLHWLEWEAG--FGKMGVCGLSMGGVHAAMVGSLHPTPV-ATLPFLSP 234 (333)
Q Consensus 180 g~~~i~E~r~ll~wl~~~~g--~~~vgv~G~SMGG~~Asl~A~~~P~~v-~~vp~~~~ 234 (333)
+...+.|...+++|+. ++. .++|+++|.||||.+|.++|+..|..+ +.+|..+.
T Consensus 75 ~~~~~~D~~~~i~~l~-~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~ 131 (550)
T TIGR00976 75 GSDEAADGYDLVDWIA-KQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGV 131 (550)
T ss_pred CcccchHHHHHHHHHH-hCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcc
Confidence 1246778899999998 443 379999999999999999999887655 44444443
No 75
>PLN00021 chlorophyllase
Probab=98.54 E-value=5.7e-07 Score=87.47 Aligned_cols=101 Identities=15% Similarity=0.153 Sum_probs=66.0
Q ss_pred ceeEEEeecCCCCCCCceEEEEecCCCCh-hHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhh
Q 019962 102 NARVAFLAPKCVPPQKMACVVHLAGTGDH-TFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLG 180 (333)
Q Consensus 102 ~a~~~~~~p~~~~~~~~v~viH~aG~Gd~-~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g 180 (333)
.-...++.|..-...++++++| |++.+ .++. .+++.|+++||.|+.++.+.++ |... .
T Consensus 38 ~~p~~v~~P~~~g~~PvVv~lH--G~~~~~~~y~--~l~~~Las~G~~VvapD~~g~~---~~~~----~---------- 96 (313)
T PLN00021 38 PKPLLVATPSEAGTYPVLLFLH--GYLLYNSFYS--QLLQHIASHGFIVVAPQLYTLA---GPDG----T---------- 96 (313)
T ss_pred CceEEEEeCCCCCCCCEEEEEC--CCCCCcccHH--HHHHHHHhCCCEEEEecCCCcC---CCCc----h----------
Confidence 3355677786522224444455 66633 3333 6788889999999999876542 2110 0
Q ss_pred hhhHHHHHHHHHHHHHh----------cCCCeeeEeeechhHHHHHHhhhcCCC
Q 019962 181 RATIEEARCLLHWLEWE----------AGFGKMGVCGLSMGGVHAAMVGSLHPT 224 (333)
Q Consensus 181 ~~~i~E~r~ll~wl~~~----------~g~~~vgv~G~SMGG~~Asl~A~~~P~ 224 (333)
..+.++..+++|+.+. .+.++++|.|+||||.+|..+|..+|+
T Consensus 97 -~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~ 149 (313)
T PLN00021 97 -DEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAA 149 (313)
T ss_pred -hhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccc
Confidence 1234556777888631 234789999999999999999998875
No 76
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.53 E-value=1.2e-06 Score=96.67 Aligned_cols=103 Identities=12% Similarity=0.114 Sum_probs=64.0
Q ss_pred CCceEEEEecCCCChhHHHhh----hhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHH
Q 019962 116 QKMACVVHLAGTGDHTFERRL----RLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLL 191 (333)
Q Consensus 116 ~~~v~viH~aG~Gd~~~~~r~----~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll 191 (333)
.+|+++|| |++.+.|..+. .+...|.++||+|++++ ||...++... ...+..|+. .+.-..+
T Consensus 67 ~~plllvh--g~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d---~G~~~~~~~~--~~~~l~~~i-------~~l~~~l 132 (994)
T PRK07868 67 GPPVLMVH--PMMMSADMWDVTRDDGAVGILHRAGLDPWVID---FGSPDKVEGG--MERNLADHV-------VALSEAI 132 (994)
T ss_pred CCcEEEEC--CCCCCccceecCCcccHHHHHHHCCCEEEEEc---CCCCChhHcC--ccCCHHHHH-------HHHHHHH
Confidence 46777788 77766543321 25777889999999998 5654332211 112222221 1222334
Q ss_pred HHHHHhcCCCeeeEeeechhHHHHHHhhhcC-CCceeeecccC
Q 019962 192 HWLEWEAGFGKMGVCGLSMGGVHAAMVGSLH-PTPVATLPFLS 233 (333)
Q Consensus 192 ~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~-P~~v~~vp~~~ 233 (333)
+.++ +.+.+++.++|+||||.+|..+|+.+ |+.+..+.+++
T Consensus 133 ~~v~-~~~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~ 174 (994)
T PRK07868 133 DTVK-DVTGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFG 174 (994)
T ss_pred HHHH-HhhCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEe
Confidence 4443 34457899999999999999888755 45677776655
No 77
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.44 E-value=1.4e-06 Score=82.60 Aligned_cols=153 Identities=18% Similarity=0.255 Sum_probs=99.7
Q ss_pred EEEEecCCC-ChhHHHhhhhchHHHh-cCccEEEeecccCCCC--CCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHH
Q 019962 120 CVVHLAGTG-DHTFERRLRLGGPLLK-ENIATMVLESPFYGQR--RPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLE 195 (333)
Q Consensus 120 ~viH~aG~G-d~~~~~r~~la~pL~~-~Gi~~ill~~Py~G~R--kP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~ 195 (333)
+++-.+|-. |-+ ..-.+-.+|.. -+++++-++.-+||.+ +|..+ .+.+|+++..+||+
T Consensus 62 ~lly~hGNa~Dlg--q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~----------------n~y~Di~avye~Lr 123 (258)
T KOG1552|consen 62 TLLYSHGNAADLG--QMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSER----------------NLYADIKAVYEWLR 123 (258)
T ss_pred EEEEcCCcccchH--HHHHHHHHHhhcccceEEEEecccccccCCCcccc----------------cchhhHHHHHHHHH
Confidence 346666773 545 21134556655 4899999999999888 44432 23456799999999
Q ss_pred HhcC-CCeeeEeeechhHHHHHHhhhcCCCceeeecccCC-CCccccccccccccCccHHHHHHHHHhhhhcCCHHHHHH
Q 019962 196 WEAG-FGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSP-HSAVVAFCEGILKHGTAWEALREELAAKKVAMTLEEVRE 273 (333)
Q Consensus 196 ~~~g-~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~-~ta~~vfteGvl~~~~~w~~L~~~l~~~~~~lt~~~a~~ 273 (333)
++.| .++|+|.|.|||-..+..+|+..| ++.+++.+| .++-.+++..+... .|
T Consensus 124 ~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~~~~~~~~--~~--------------------- 178 (258)
T KOG1552|consen 124 NRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVAFPDTKTT--YC--------------------- 178 (258)
T ss_pred hhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhhhccCcceE--Ee---------------------
Confidence 6664 799999999999999999999999 566666554 22222222211110 00
Q ss_pred HHHHhhccCCCCCCCCCCCCCeEEEEEecCCccccchhhHHhhhcccc
Q 019962 274 RMRNVLSLTDVTRFPIPKIPNAVIFVAATVSTVFDYHHEEVLKMDSQH 321 (333)
Q Consensus 274 rl~~~l~~t~l~nf~~p~dp~~ilvV~g~~D~yVP~~~~~~L~~~~~~ 321 (333)
+. .+..+..-... .-+++++.|++|.+||.+++.+|.+.-++
T Consensus 179 -~d---~f~~i~kI~~i--~~PVLiiHgtdDevv~~sHg~~Lye~~k~ 220 (258)
T KOG1552|consen 179 -FD---AFPNIEKISKI--TCPVLIIHGTDDEVVDFSHGKALYERCKE 220 (258)
T ss_pred -ec---cccccCcceec--cCCEEEEecccCceecccccHHHHHhccc
Confidence 00 11111111111 12599999999999999999999998776
No 78
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.38 E-value=5.6e-06 Score=79.47 Aligned_cols=220 Identities=15% Similarity=0.107 Sum_probs=126.7
Q ss_pred CCceeeee-eccCeEEEeeeeeCCCcccccCCCCccccceeEEEeecCCCCCCCceEEEEecCCCChh-HHHhhhhchHH
Q 019962 65 QPIWRTIW-ETQTAVLREGVFRTPCDEQLMSALPPESHNARVAFLAPKCVPPQKMACVVHLAGTGDHT-FERRLRLGGPL 142 (333)
Q Consensus 65 ~p~~~~~~-~~~~~~~~~g~F~Sp~~~~~p~~lp~~s~~a~~~~~~p~~~~~~~~v~viH~aG~Gd~~-~~~r~~la~pL 142 (333)
+|+.+... -...+++++.+|++-= ...-+.-+++|++-....| |++|.+|.|..+ +|-- . ..+
T Consensus 41 ~p~l~~~d~~~~~ve~ydvTf~g~~-----------g~rI~gwlvlP~~~~~~~P-~vV~fhGY~g~~g~~~~-~--l~w 105 (321)
T COG3458 41 EPVLERSDFTLPRVEVYDVTFTGYG-----------GARIKGWLVLPRHEKGKLP-AVVQFHGYGGRGGEWHD-M--LHW 105 (321)
T ss_pred CceEEeccccCCceEEEEEEEeccC-----------CceEEEEEEeecccCCccc-eEEEEeeccCCCCCccc-c--ccc
Confidence 45555543 3457899999998762 2455788899998543445 679999998664 2210 1 124
Q ss_pred HhcCccEEEeecccCCCCCCCcccCcccc-hhhhHHHhhh----------hhHHHHHHHHHHHHHhc---CCCeeeEeee
Q 019962 143 LKENIATMVLESPFYGQRRPLLQRGAKLL-CVSDLLLLGR----------ATIEEARCLLHWLEWEA---GFGKMGVCGL 208 (333)
Q Consensus 143 ~~~Gi~~ill~~Py~G~RkP~~q~~s~l~-~vsd~~~~g~----------~~i~E~r~ll~wl~~~~---g~~~vgv~G~ 208 (333)
.-+||+++.++.=+-|...-+.. .+... +++++.+.|- .-+.|+-.+++-+- .+ .-+||+++|.
T Consensus 106 a~~Gyavf~MdvRGQg~~~~dt~-~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~-sl~~vde~Ri~v~G~ 183 (321)
T COG3458 106 AVAGYAVFVMDVRGQGSSSQDTA-DPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILA-SLDEVDEERIGVTGG 183 (321)
T ss_pred cccceeEEEEecccCCCccccCC-CCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHh-ccCccchhheEEecc
Confidence 45799999988766655422110 01111 2223332221 22555555555554 33 3489999999
Q ss_pred chhHHHHHHhhhcCCCceeeecccCCCCc-cccccccccccCccHHHHHHHHHhhhhcCCHHHHHHHHHHhhccCCCCCC
Q 019962 209 SMGGVHAAMVGSLHPTPVATLPFLSPHSA-VVAFCEGILKHGTAWEALREELAAKKVAMTLEEVRERMRNVLSLTDVTRF 287 (333)
Q Consensus 209 SMGG~~Asl~A~~~P~~v~~vp~~~~~ta-~~vfteGvl~~~~~w~~L~~~l~~~~~~lt~~~a~~rl~~~l~~t~l~nf 287 (333)
|-||.+|..+|+.+|++.+.++.++--+- ..++. +...-+++.+..-+..+-. -.+..=+.|++-+..|+
T Consensus 184 SqGGglalaaaal~~rik~~~~~~Pfl~df~r~i~---~~~~~~ydei~~y~k~h~~------~e~~v~~TL~yfD~~n~ 254 (321)
T COG3458 184 SQGGGLALAAAALDPRIKAVVADYPFLSDFPRAIE---LATEGPYDEIQTYFKRHDP------KEAEVFETLSYFDIVNL 254 (321)
T ss_pred ccCchhhhhhhhcChhhhcccccccccccchhhee---ecccCcHHHHHHHHHhcCc------hHHHHHHHHhhhhhhhH
Confidence 99999999999999998877766442111 11111 1112223344331111111 01112223355566666
Q ss_pred CC-CCCCCeEEEEEecCCccccchhh
Q 019962 288 PI-PKIPNAVIFVAATVSTVFDYHHE 312 (333)
Q Consensus 288 ~~-p~dp~~ilvV~g~~D~yVP~~~~ 312 (333)
.. .+-| +++..|.-|...|+.+.
T Consensus 255 A~RiK~p--vL~svgL~D~vcpPstq 278 (321)
T COG3458 255 AARIKVP--VLMSVGLMDPVCPPSTQ 278 (321)
T ss_pred HHhhccc--eEEeecccCCCCCChhh
Confidence 55 3446 89999999999999765
No 79
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.36 E-value=7.3e-07 Score=78.03 Aligned_cols=77 Identities=23% Similarity=0.310 Sum_probs=57.1
Q ss_pred ccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHH-HHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCCCc
Q 019962 147 IATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEA-RCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPTP 225 (333)
Q Consensus 147 i~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~-r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~ 225 (333)
|+|++++.|++|.+.|.....-... ...+. +.+...++ ..|.+++.++|.||||.++...|+.+|+.
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~-----------~~~~~~~~~~~~~~-~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~ 68 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDY-----------TTDDLAADLEALRE-ALGIKKINLVGHSMGGMLALEYAAQYPER 68 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTH-----------CHHHHHHHHHHHHH-HHTTSSEEEEEETHHHHHHHHHHHHSGGG
T ss_pred CEEEEEeCCCCCCCCCCccCCcccc-----------cHHHHHHHHHHHHH-HhCCCCeEEEEECCChHHHHHHHHHCchh
Confidence 6899999999999986200000000 11122 44455555 89999999999999999999999999999
Q ss_pred eeeecccCCC
Q 019962 226 VATLPFLSPH 235 (333)
Q Consensus 226 v~~vp~~~~~ 235 (333)
+..+.++++.
T Consensus 69 v~~lvl~~~~ 78 (230)
T PF00561_consen 69 VKKLVLISPP 78 (230)
T ss_dssp EEEEEEESES
T ss_pred hcCcEEEeee
Confidence 9999988764
No 80
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.34 E-value=5.5e-06 Score=75.93 Aligned_cols=80 Identities=21% Similarity=0.269 Sum_probs=62.7
Q ss_pred hhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHHhcCCCee-eEeeechhHHHH
Q 019962 137 RLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEWEAGFGKM-GVCGLSMGGVHA 215 (333)
Q Consensus 137 ~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~~~g~~~v-gv~G~SMGG~~A 215 (333)
.+++.|.+.|++++++++=.-|++. +-|-.|..++.|+++.++|++++..-.+. -+.|+|.|+++|
T Consensus 51 ~la~~l~~~G~atlRfNfRgVG~S~-------------G~fD~GiGE~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia 117 (210)
T COG2945 51 TLARALVKRGFATLRFNFRGVGRSQ-------------GEFDNGIGELEDAAAALDWLQARHPDSASCWLAGFSFGAYIA 117 (210)
T ss_pred HHHHHHHhCCceEEeeccccccccc-------------CcccCCcchHHHHHHHHHHHHhhCCCchhhhhcccchHHHHH
Confidence 5888999999999998875545442 22345678889999999999965555444 889999999999
Q ss_pred HHhhhcCCCceeee
Q 019962 216 AMVGSLHPTPVATL 229 (333)
Q Consensus 216 sl~A~~~P~~v~~v 229 (333)
+++|...|+...-+
T Consensus 118 ~~la~r~~e~~~~i 131 (210)
T COG2945 118 MQLAMRRPEILVFI 131 (210)
T ss_pred HHHHHhccccccee
Confidence 99999998754433
No 81
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.34 E-value=1.3e-05 Score=78.78 Aligned_cols=188 Identities=18% Similarity=0.213 Sum_probs=105.0
Q ss_pred CceEEEEecCCC-ChhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHH
Q 019962 117 KMACVVHLAGTG-DHTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLE 195 (333)
Q Consensus 117 ~~v~viH~aG~G-d~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~ 195 (333)
+.+++.||--.+ .+.|.+ .+++.+.++||.++++.+=..++..- .... ++..|-. +|++.+++|++
T Consensus 76 P~vVl~HGL~G~s~s~y~r--~L~~~~~~rg~~~Vv~~~Rgcs~~~n--~~p~-------~yh~G~t--~D~~~~l~~l~ 142 (345)
T COG0429 76 PLVVLFHGLEGSSNSPYAR--GLMRALSRRGWLVVVFHFRGCSGEAN--TSPR-------LYHSGET--EDIRFFLDWLK 142 (345)
T ss_pred ceEEEEeccCCCCcCHHHH--HHHHHHHhcCCeEEEEecccccCCcc--cCcc-------eecccch--hHHHHHHHHHH
Confidence 456677854333 445776 89999999999999987766655422 1111 1122222 78999999999
Q ss_pred HhcCCCeeeEeeechhH-HHHHHhh--hcCCCceeeecccCCCCc---cccccccccc--cCccH-HHHHHHHHhhhhc-
Q 019962 196 WEAGFGKMGVCGLSMGG-VHAAMVG--SLHPTPVATLPFLSPHSA---VVAFCEGILK--HGTAW-EALREELAAKKVA- 265 (333)
Q Consensus 196 ~~~g~~~vgv~G~SMGG-~~Asl~A--~~~P~~v~~vp~~~~~ta---~~vfteGvl~--~~~~w-~~L~~~l~~~~~~- 265 (333)
.+.+..++..+|+|||| .+|..++ +.++...+.+...+|... +.-+-.|.-+ ++... ..|++....+-.+
T Consensus 143 ~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l 222 (345)
T COG0429 143 ARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLRNLKRNAARKLKEL 222 (345)
T ss_pred HhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHhc
Confidence 55677999999999999 4555554 234444444443333222 0001122110 00000 2222222111111
Q ss_pred -----CCHHHHHHHHHHhhccCCCCCCCC-------------------CCCCCeEEEEEecCCccccchhhHHhhh
Q 019962 266 -----MTLEEVRERMRNVLSLTDVTRFPI-------------------PKIPNAVIFVAATVSTVFDYHHEEVLKM 317 (333)
Q Consensus 266 -----lt~~~a~~rl~~~l~~t~l~nf~~-------------------p~dp~~ilvV~g~~D~yVP~~~~~~L~~ 317 (333)
.+..+..++++.+.+++++.+-+. |....++|+|.|++|-|+|++..-.++.
T Consensus 223 ~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~ 298 (345)
T COG0429 223 EPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQE 298 (345)
T ss_pred CcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecCCCCCCChhhCCcchh
Confidence 122345555666666666522211 1112279999999999999977666553
No 82
>PLN02872 triacylglycerol lipase
Probab=98.34 E-value=1.3e-06 Score=87.50 Aligned_cols=151 Identities=12% Similarity=-0.024 Sum_probs=86.4
Q ss_pred CCCCceeeeeeccCeEEEeeeeeCCCcccccCCCCccccceeEEEeecCCCCCCCceEEEEecCCCChhHHHh---hhhc
Q 019962 63 LIQPIWRTIWETQTAVLREGVFRTPCDEQLMSALPPESHNARVAFLAPKCVPPQKMACVVHLAGTGDHTFERR---LRLG 139 (333)
Q Consensus 63 ~~~p~~~~~~~~~~~~~~~g~F~Sp~~~~~p~~lp~~s~~a~~~~~~p~~~~~~~~v~viH~aG~Gd~~~~~r---~~la 139 (333)
..||+..-...+.|+-++...-..+ ..... .-...+||+++||-+.....|..+ ..++
T Consensus 40 ~gy~~e~h~v~T~DGy~L~l~ri~~----------~~~~~---------~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla 100 (395)
T PLN02872 40 AGYSCTEHTIQTKDGYLLALQRVSS----------RNPRL---------GSQRGPPVLLQHGLFMAGDAWFLNSPEQSLG 100 (395)
T ss_pred cCCCceEEEEECCCCcEEEEEEcCC----------CCCCC---------CCCCCCeEEEeCcccccccceeecCcccchH
Confidence 3477766667777777776654321 00000 001235666777433333334321 2477
Q ss_pred hHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHHhcCCCeeeEeeechhHHHHHHhh
Q 019962 140 GPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVG 219 (333)
Q Consensus 140 ~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A 219 (333)
..|+++||+|+++++..++..+............-| +..-..++.|..++++++. +....++.++|+||||.++. ++
T Consensus 101 ~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~-~s~~e~a~~Dl~a~id~i~-~~~~~~v~~VGhS~Gg~~~~-~~ 177 (395)
T PLN02872 101 FILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWD-WSWQELALYDLAEMIHYVY-SITNSKIFIVGHSQGTIMSL-AA 177 (395)
T ss_pred HHHHhCCCCcccccccccccccCCCCCCccchhccC-CcHHHHHHHHHHHHHHHHH-hccCCceEEEEECHHHHHHH-HH
Confidence 778899999999999987643211100000000001 1111223468899999997 44458999999999999887 44
Q ss_pred hcCCC---ceeeecccCCC
Q 019962 220 SLHPT---PVATLPFLSPH 235 (333)
Q Consensus 220 ~~~P~---~v~~vp~~~~~ 235 (333)
...|+ .+..+.+++|.
T Consensus 178 ~~~p~~~~~v~~~~~l~P~ 196 (395)
T PLN02872 178 LTQPNVVEMVEAAALLCPI 196 (395)
T ss_pred hhChHHHHHHHHHHHhcch
Confidence 46776 45566666654
No 83
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=98.20 E-value=1.9e-06 Score=79.93 Aligned_cols=179 Identities=16% Similarity=0.205 Sum_probs=107.9
Q ss_pred EEecCCCChhHHHhhhhchHHHh-cCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHHhcCC
Q 019962 122 VHLAGTGDHTFERRLRLGGPLLK-ENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEWEAGF 200 (333)
Q Consensus 122 iH~aG~Gd~~~~~r~~la~pL~~-~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~~~g~ 200 (333)
+-+.|.-.+++-.+.---..|.+ .-+.++..+-|.||.++|+++.+...+. ..|+...++.++ .+..
T Consensus 46 LlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff-----------~~Da~~avdLM~-aLk~ 113 (277)
T KOG2984|consen 46 LLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFF-----------MKDAEYAVDLME-ALKL 113 (277)
T ss_pred EecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHH-----------HHhHHHHHHHHH-HhCC
Confidence 44455555554433311122333 2389999999999999999864433322 246788999999 8999
Q ss_pred CeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCcccccccccccc-----CccHHH-HHHHHHhhhhc-CCHHHHHH
Q 019962 201 GKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAVVAFCEGILKH-----GTAWEA-LREELAAKKVA-MTLEEVRE 273 (333)
Q Consensus 201 ~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta~~vfteGvl~~-----~~~w~~-L~~~l~~~~~~-lt~~~a~~ 273 (333)
+++.|.|-|=||.+|..+|+.+++-|-.+..|+..+= +-.+|++.+ .--|.. .++-+ .+... -+-....+
T Consensus 114 ~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ay--vn~~~~ma~kgiRdv~kWs~r~R~P~-e~~Yg~e~f~~~wa 190 (277)
T KOG2984|consen 114 EPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAY--VNHLGAMAFKGIRDVNKWSARGRQPY-EDHYGPETFRTQWA 190 (277)
T ss_pred CCeeEeeecCCCeEEEEeeccChhhhhhheeecccce--ecchhHHHHhchHHHhhhhhhhcchH-HHhcCHHHHHHHHH
Confidence 9999999999999999999999999999888874332 222343332 111211 11111 01110 01112222
Q ss_pred HHHHhh-ccCCCC--C-----CCCCCCCCeEEEEEecCCccccchhhHHhhh
Q 019962 274 RMRNVL-SLTDVT--R-----FPIPKIPNAVIFVAATVSTVFDYHHEEVLKM 317 (333)
Q Consensus 274 rl~~~l-~~t~l~--n-----f~~p~dp~~ilvV~g~~D~yVP~~~~~~L~~ 317 (333)
.+-.+. ++.|.. + .+..+.| ++|+.|..|.|++..++--+..
T Consensus 191 ~wvD~v~qf~~~~dG~fCr~~lp~vkcP--tli~hG~kDp~~~~~hv~fi~~ 240 (277)
T KOG2984|consen 191 AWVDVVDQFHSFCDGRFCRLVLPQVKCP--TLIMHGGKDPFCGDPHVCFIPV 240 (277)
T ss_pred HHHHHHHHHhhcCCCchHhhhcccccCC--eeEeeCCcCCCCCCCCccchhh
Confidence 332222 333221 1 2223556 8999999999999888765544
No 84
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.20 E-value=5.3e-06 Score=70.70 Aligned_cols=102 Identities=20% Similarity=0.208 Sum_probs=68.3
Q ss_pred CceEEEEecCCCChhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHH
Q 019962 117 KMACVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEW 196 (333)
Q Consensus 117 ~~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~ 196 (333)
++++++||.+.....|............. ++++.++.|.||.+. .. ......+ +..+..+++
T Consensus 22 ~~i~~~hg~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~g~g~s~-~~-----~~~~~~~----------~~~~~~~~~- 83 (282)
T COG0596 22 PPLVLLHGFPGSSSVWRPVFKVLPALAAR-YRVIAPDLRGHGRSD-PA-----GYSLSAY----------ADDLAALLD- 83 (282)
T ss_pred CeEEEeCCCCCchhhhHHHHHHhhccccc-eEEEEecccCCCCCC-cc-----cccHHHH----------HHHHHHHHH-
Confidence 36667774443333444311111122223 999999999999987 10 0011011 466666776
Q ss_pred hcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCCC
Q 019962 197 EAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHS 236 (333)
Q Consensus 197 ~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~t 236 (333)
..|..++.+.|+||||.++..+|..+|+.+..+.++++..
T Consensus 84 ~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~ 123 (282)
T COG0596 84 ALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAP 123 (282)
T ss_pred HhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCC
Confidence 7888889999999999999999999999888888888543
No 85
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.18 E-value=1e-05 Score=87.52 Aligned_cols=84 Identities=18% Similarity=0.154 Sum_probs=61.7
Q ss_pred hchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHHhcC----------------CC
Q 019962 138 LGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEWEAG----------------FG 201 (333)
Q Consensus 138 la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~~~g----------------~~ 201 (333)
+..-++++||+|+..+..+.|.+.-.. ...|.....+...+++||..+.. .+
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~SeG~~------------~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnG 338 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRGSDGCP------------TTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNG 338 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCCCCCcC------------ccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCC
Confidence 456678899999999999887663321 12334577788999999973211 48
Q ss_pred eeeEeeechhHHHHHHhhhcCCC-ceeeecccC
Q 019962 202 KMGVCGLSMGGVHAAMVGSLHPT-PVATLPFLS 233 (333)
Q Consensus 202 ~vgv~G~SMGG~~Asl~A~~~P~-~v~~vp~~~ 233 (333)
+||++|.|+||.++.++|+..|. ..+++|..+
T Consensus 339 kVGm~G~SY~G~~~~~aAa~~pp~LkAIVp~a~ 371 (767)
T PRK05371 339 KVAMTGKSYLGTLPNAVATTGVEGLETIIPEAA 371 (767)
T ss_pred eeEEEEEcHHHHHHHHHHhhCCCcceEEEeeCC
Confidence 99999999999999999887655 445555433
No 86
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.15 E-value=5.8e-05 Score=67.03 Aligned_cols=84 Identities=17% Similarity=0.187 Sum_probs=55.6
Q ss_pred EEEEecCCCChhHHHhhhhchHHHh-cCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHHh-
Q 019962 120 CVVHLAGTGDHTFERRLRLGGPLLK-ENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEWE- 197 (333)
Q Consensus 120 ~viH~aG~Gd~~~~~r~~la~pL~~-~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~~- 197 (333)
+.|||.|+-...-.....++..+++ .|+.++.++.+- -|.... -+.+.|+...+.|+.+.
T Consensus 2 ~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl----~p~~~~--------------p~~~~D~~~a~~~l~~~~ 63 (211)
T PF07859_consen 2 VYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRL----APEAPF--------------PAALEDVKAAYRWLLKNA 63 (211)
T ss_dssp EEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE-------TTTSST--------------THHHHHHHHHHHHHHHTH
T ss_pred EEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccc----cccccc--------------cccccccccceeeecccc
Confidence 4677766652221111357888886 799999988742 233211 14677889999999843
Q ss_pred ----cCCCeeeEeeechhHHHHHHhhhc
Q 019962 198 ----AGFGKMGVCGLSMGGVHAAMVGSL 221 (333)
Q Consensus 198 ----~g~~~vgv~G~SMGG~~Asl~A~~ 221 (333)
.+.++|+|+|.|-||++|+.++..
T Consensus 64 ~~~~~d~~~i~l~G~SAGg~la~~~~~~ 91 (211)
T PF07859_consen 64 DKLGIDPERIVLIGDSAGGHLALSLALR 91 (211)
T ss_dssp HHHTEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred ccccccccceEEeecccccchhhhhhhh
Confidence 235899999999999999999863
No 87
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.10 E-value=3.4e-05 Score=72.52 Aligned_cols=136 Identities=15% Similarity=0.191 Sum_probs=85.4
Q ss_pred eEEEeec-CCCCCCCceEEEEecCCCCh--hHHHhh-hh------chHHHhcCccEEEeecccCCCCCCCcccCcccchh
Q 019962 104 RVAFLAP-KCVPPQKMACVVHLAGTGDH--TFERRL-RL------GGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCV 173 (333)
Q Consensus 104 ~~~~~~p-~~~~~~~~v~viH~aG~Gd~--~~~~r~-~l------a~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~v 173 (333)
+..+++| ..-....|++ ++-.+.|-+ ...... .. ...++++||+++..+.-+.|.+.=... .
T Consensus 6 ~adv~~P~~~~~~~~P~i-l~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~-------~ 77 (272)
T PF02129_consen 6 AADVYRPGADGGGPFPVI-LTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFD-------P 77 (272)
T ss_dssp EEEEEEE--TTSSSEEEE-EEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B--------T
T ss_pred EEEEEecCCCCCCcccEE-EEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccc-------c
Confidence 4667889 2212334544 555566632 222211 11 223999999999999988776632211 0
Q ss_pred hhHHHhhhhhHHHHHHHHHHHHHhcCC--CeeeEeeechhHHHHHHhhh-cCCCceeeecccCCCCccc--ccccccccc
Q 019962 174 SDLLLLGRATIEEARCLLHWLEWEAGF--GKMGVCGLSMGGVHAAMVGS-LHPTPVATLPFLSPHSAVV--AFCEGILKH 248 (333)
Q Consensus 174 sd~~~~g~~~i~E~r~ll~wl~~~~g~--~~vgv~G~SMGG~~Asl~A~-~~P~~v~~vp~~~~~ta~~--vfteGvl~~ 248 (333)
++.....|...+++|+. ++.- ++||++|.|-+|.++.++|+ ..|...+++|.+++...-. .+..|+...
T Consensus 78 -----~~~~e~~D~~d~I~W~~-~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~~~~~~gG~~~~ 151 (272)
T PF02129_consen 78 -----MSPNEAQDGYDTIEWIA-AQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYRDSIYPGGAFRL 151 (272)
T ss_dssp -----TSHHHHHHHHHHHHHHH-HCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCCTSSEETTEEBC
T ss_pred -----CChhHHHHHHHHHHHHH-hCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccccchhcCCcccc
Confidence 04567788899999998 5553 89999999999999999999 6777888888877666533 344566554
Q ss_pred --CccHH
Q 019962 249 --GTAWE 253 (333)
Q Consensus 249 --~~~w~ 253 (333)
...|.
T Consensus 152 ~~~~~w~ 158 (272)
T PF02129_consen 152 GFFAGWE 158 (272)
T ss_dssp CHHHHHH
T ss_pred cchhHHH
Confidence 23563
No 88
>PRK10162 acetyl esterase; Provisional
Probab=98.08 E-value=2e-05 Score=76.15 Aligned_cols=98 Identities=16% Similarity=0.170 Sum_probs=62.9
Q ss_pred eeEEEeecCCCCCCCceEEEEecCCC--ChhHHHhhhhchHHHh-cCccEEEeecccCCCCCCCcccCcccchhhhHHHh
Q 019962 103 ARVAFLAPKCVPPQKMACVVHLAGTG--DHTFERRLRLGGPLLK-ENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLL 179 (333)
Q Consensus 103 a~~~~~~p~~~~~~~~v~viH~aG~G--d~~~~~r~~la~pL~~-~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~ 179 (333)
....++.|+.- ..+.++.+||.|+. +...+. .+++.|++ .|+.|+.++.. ..|.....
T Consensus 69 i~~~~y~P~~~-~~p~vv~~HGGg~~~g~~~~~~--~~~~~la~~~g~~Vv~vdYr----lape~~~p------------ 129 (318)
T PRK10162 69 VETRLYYPQPD-SQATLFYLHGGGFILGNLDTHD--RIMRLLASYSGCTVIGIDYT----LSPEARFP------------ 129 (318)
T ss_pred eEEEEECCCCC-CCCEEEEEeCCcccCCCchhhh--HHHHHHHHHcCCEEEEecCC----CCCCCCCC------------
Confidence 45677888641 22334466765543 222222 46778887 59999998842 13332111
Q ss_pred hhhhHHHHHHHHHHHHH---hcCC--CeeeEeeechhHHHHHHhhhc
Q 019962 180 GRATIEEARCLLHWLEW---EAGF--GKMGVCGLSMGGVHAAMVGSL 221 (333)
Q Consensus 180 g~~~i~E~r~ll~wl~~---~~g~--~~vgv~G~SMGG~~Asl~A~~ 221 (333)
+.+.|+...++|+.+ +.|+ ++|+|+|.|+||.+|+.+|..
T Consensus 130 --~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~ 174 (318)
T PRK10162 130 --QAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALW 174 (318)
T ss_pred --CcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHH
Confidence 245677888888863 2344 699999999999999998863
No 89
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=97.98 E-value=5.7e-05 Score=81.80 Aligned_cols=100 Identities=21% Similarity=0.211 Sum_probs=61.6
Q ss_pred ceEEEEecCCCChh-HHHhhhhchHHHhcCccEEEeecccCCCCCCCccc---------Ccccch------hhhHHHhhh
Q 019962 118 MACVVHLAGTGDHT-FERRLRLGGPLLKENIATMVLESPFYGQRRPLLQR---------GAKLLC------VSDLLLLGR 181 (333)
Q Consensus 118 ~v~viH~aG~Gd~~-~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~---------~s~l~~------vsd~~~~g~ 181 (333)
+++++| |.+.+. .|. .++..|.++||+|+.++.|+||+|.-.... .....+ .-|.+ +
T Consensus 451 ~VVllH--G~~g~~~~~~--~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~---r 523 (792)
T TIGR03502 451 VVIYQH--GITGAKENAL--AFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNL---R 523 (792)
T ss_pred EEEEeC--CCCCCHHHHH--HHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCH---H
Confidence 344555 777553 233 688899999999999999999999333110 000111 11222 2
Q ss_pred hhHHHHHHHHHHHH------Hh------cCCCeeeEeeechhHHHHHHhhhcCCC
Q 019962 182 ATIEEARCLLHWLE------WE------AGFGKMGVCGLSMGGVHAAMVGSLHPT 224 (333)
Q Consensus 182 ~~i~E~r~ll~wl~------~~------~g~~~vgv~G~SMGG~~Asl~A~~~P~ 224 (333)
..+.|...|...+. ++ .+..++.+.|+||||.++..+++...+
T Consensus 524 Q~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~an~ 578 (792)
T TIGR03502 524 QSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYANT 578 (792)
T ss_pred HHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhcCc
Confidence 33444444444332 01 234799999999999999999876444
No 90
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=97.94 E-value=0.00014 Score=72.83 Aligned_cols=101 Identities=18% Similarity=0.141 Sum_probs=63.0
Q ss_pred hhHHHhh-hhchHHHhcCccEEEeecccCCCC--------CCCcccC-cccchhhhHHHhhhhhHHH-HHHHHHHHHHhc
Q 019962 130 HTFERRL-RLGGPLLKENIATMVLESPFYGQR--------RPLLQRG-AKLLCVSDLLLLGRATIEE-ARCLLHWLEWEA 198 (333)
Q Consensus 130 ~~~~~r~-~la~pL~~~Gi~~ill~~Py~G~R--------kP~~q~~-s~l~~vsd~~~~g~~~i~E-~r~ll~wl~~~~ 198 (333)
.+||... .=.++|=-.-|-+|.++...-+.. -|..... ++...-.|+-. -++.+ ++.+.+.++ ++
T Consensus 82 ~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~---~t~~d~~~~~~~ll~-~l 157 (389)
T PRK06765 82 SGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPYGMDFPV---VTILDFVRVQKELIK-SL 157 (389)
T ss_pred cccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCc---CcHHHHHHHHHHHHH-Hc
Confidence 3678632 112233346799999988866542 2221111 11100001100 12333 366667777 89
Q ss_pred CCCeee-EeeechhHHHHHHhhhcCCCceeeecccCC
Q 019962 199 GFGKMG-VCGLSMGGVHAAMVGSLHPTPVATLPFLSP 234 (333)
Q Consensus 199 g~~~vg-v~G~SMGG~~Asl~A~~~P~~v~~vp~~~~ 234 (333)
|+.++. |+|.||||.+|...|..+|+.+..+.+++.
T Consensus 158 gi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~ 194 (389)
T PRK06765 158 GIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIG 194 (389)
T ss_pred CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEec
Confidence 999997 999999999999999999999888888764
No 91
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=97.92 E-value=0.00034 Score=66.74 Aligned_cols=114 Identities=22% Similarity=0.231 Sum_probs=67.2
Q ss_pred eEEEeec-CCCCCCCceEEEEecCCC-ChhHHHhh-hh-chHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHh
Q 019962 104 RVAFLAP-KCVPPQKMACVVHLAGTG-DHTFERRL-RL-GGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLL 179 (333)
Q Consensus 104 ~~~~~~p-~~~~~~~~v~viH~aG~G-d~~~~~r~-~l-a~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~ 179 (333)
..+++.| .......|+ ++++||.| ..+..+-. .+ +..+...|+.|+.++- |..+.. ..-
T Consensus 65 ~~~~y~p~~~~~~~~p~-vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdY-----rlaPe~-----~~p------ 127 (312)
T COG0657 65 PVRVYRPDRKAAATAPV-VLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDY-----RLAPEH-----PFP------ 127 (312)
T ss_pred eEEEECCCCCCCCCCcE-EEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCC-----CCCCCC-----CCC------
Confidence 3777888 222222343 24444555 22222211 34 4444458999999876 533321 111
Q ss_pred hhhhHHHHHHHHHHHHHhc---C--CCeeeEeeechhHHHHHHhhhcC-----CCceeeecccCCCC
Q 019962 180 GRATIEEARCLLHWLEWEA---G--FGKMGVCGLSMGGVHAAMVGSLH-----PTPVATLPFLSPHS 236 (333)
Q Consensus 180 g~~~i~E~r~ll~wl~~~~---g--~~~vgv~G~SMGG~~Asl~A~~~-----P~~v~~vp~~~~~t 236 (333)
+.+.|+...+.|+.+.. | -++|.|+|.|-||++|+.+|... |.+...+.+.++..
T Consensus 128 --~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d 192 (312)
T COG0657 128 --AALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLD 192 (312)
T ss_pred --chHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccC
Confidence 45677889999998432 2 58999999999999999997643 34555554444433
No 92
>PRK10115 protease 2; Provisional
Probab=97.83 E-value=0.00025 Score=75.98 Aligned_cols=161 Identities=15% Similarity=0.076 Sum_probs=91.4
Q ss_pred chHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHHhcCC---CeeeEeeechhHHHH
Q 019962 139 GGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEWEAGF---GKMGVCGLSMGGVHA 215 (333)
Q Consensus 139 a~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~~~g~---~~vgv~G~SMGG~~A 215 (333)
...|+.+||.++....=+-|.. ++. ..-.+....+...+.|.-+..+||. +.|+ +++++.|-|-||+++
T Consensus 467 ~~~l~~rG~~v~~~n~RGs~g~---G~~----w~~~g~~~~k~~~~~D~~a~~~~Lv-~~g~~d~~rl~i~G~S~GG~l~ 538 (686)
T PRK10115 467 RLSLLDRGFVYAIVHVRGGGEL---GQQ----WYEDGKFLKKKNTFNDYLDACDALL-KLGYGSPSLCYGMGGSAGGMLM 538 (686)
T ss_pred HHHHHHCCcEEEEEEcCCCCcc---CHH----HHHhhhhhcCCCcHHHHHHHHHHHH-HcCCCChHHeEEEEECHHHHHH
Confidence 3468889999999754111100 000 0011233334456788888899998 7785 999999999999999
Q ss_pred HHhhhcCCCceeeecccCCCCcccccc--ccccccCccHHHHHHHHHhhhhcCCHHHHHHHHHHhhccCCCCCCCCCCCC
Q 019962 216 AMVGSLHPTPVATLPFLSPHSAVVAFC--EGILKHGTAWEALREELAAKKVAMTLEEVRERMRNVLSLTDVTRFPIPKIP 293 (333)
Q Consensus 216 sl~A~~~P~~v~~vp~~~~~ta~~vft--eGvl~~~~~w~~L~~~l~~~~~~lt~~~a~~rl~~~l~~t~l~nf~~p~dp 293 (333)
+.++...|+.-+.+.+-.|.+--..|. +-+. ..|....+ . +...+++..+.|+ ++..+.|.....-|
T Consensus 539 ~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~~p---~~~~~~~e-~----G~p~~~~~~~~l~---~~SP~~~v~~~~~P 607 (686)
T PRK10115 539 GVAINQRPELFHGVIAQVPFVDVVTTMLDESIP---LTTGEFEE-W----GNPQDPQYYEYMK---SYSPYDNVTAQAYP 607 (686)
T ss_pred HHHHhcChhheeEEEecCCchhHhhhcccCCCC---CChhHHHH-h----CCCCCHHHHHHHH---HcCchhccCccCCC
Confidence 999999998776666544333211111 1111 11221111 1 1111122222222 33333233332234
Q ss_pred CeEEEEEecCCccccchhhHHhhhcc
Q 019962 294 NAVIFVAATVSTVFDYHHEEVLKMDS 319 (333)
Q Consensus 294 ~~ilvV~g~~D~yVP~~~~~~L~~~~ 319 (333)
.+|+++|.+|.-||+.+++++.+.-
T Consensus 608 -~lLi~~g~~D~RV~~~~~~k~~a~L 632 (686)
T PRK10115 608 -HLLVTTGLHDSQVQYWEPAKWVAKL 632 (686)
T ss_pred -ceeEEecCCCCCcCchHHHHHHHHH
Confidence 3567899999999999988766543
No 93
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.82 E-value=0.00012 Score=66.99 Aligned_cols=131 Identities=19% Similarity=0.164 Sum_probs=73.9
Q ss_pred ccceeEEEeecCCCCCC--CceEEEEecCCCChhHHHhh---hhchHHHhcC--ccEEEeecccCCCCCCCcccCcc---
Q 019962 100 SHNARVAFLAPKCVPPQ--KMACVVHLAGTGDHTFERRL---RLGGPLLKEN--IATMVLESPFYGQRRPLLQRGAK--- 169 (333)
Q Consensus 100 s~~a~~~~~~p~~~~~~--~~v~viH~aG~Gd~~~~~r~---~la~pL~~~G--i~~ill~~Py~G~RkP~~q~~s~--- 169 (333)
.+.-++.+++|..+... -|| ++.++|. +.|.... .....+.++| -.++++-.|..+.++-.......
T Consensus 5 g~~~~~~VylP~~y~~~~~~Pv-lylldG~--~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~ 81 (251)
T PF00756_consen 5 GRDRRVWVYLPPGYDPSKPYPV-LYLLDGQ--SGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGS 81 (251)
T ss_dssp TEEEEEEEEECTTGGTTTTEEE-EEEESHT--THHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCT
T ss_pred CCeEEEEEEECCCCCCCCCCEE-EEEccCC--ccccccchHHHHHHHHHHhCCCCceEEEEEeccccccccccccccccc
Confidence 35567888999986432 344 4566675 2333322 2344455543 34555556655444111000000
Q ss_pred cchhhhHHHhhhhhHHH--HHHHHHHHHHhcCCC--eeeEeeechhHHHHHHhhhcCCCceeeecccCCC
Q 019962 170 LLCVSDLLLLGRATIEE--ARCLLHWLEWEAGFG--KMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPH 235 (333)
Q Consensus 170 l~~vsd~~~~g~~~i~E--~r~ll~wl~~~~g~~--~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ 235 (333)
.....+ ..+.....+ ...|+-|++++.... +.+|+|.||||..|..+|..+|+.-+.+.++||.
T Consensus 82 ~~~~~~--~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 82 SRRADD--SGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp TCBCTS--TTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred cccccc--CCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 000000 000011111 268899998655542 2799999999999999999999999999888754
No 94
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.75 E-value=0.00062 Score=66.67 Aligned_cols=109 Identities=16% Similarity=0.132 Sum_probs=74.3
Q ss_pred ecCCCCCCCceEEEEecCCCChhHHHhhhhchHHHh-cCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHH
Q 019962 109 APKCVPPQKMACVVHLAGTGDHTFERRLRLGGPLLK-ENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEA 187 (333)
Q Consensus 109 ~p~~~~~~~~v~viH~aG~Gd~~~~~r~~la~pL~~-~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~ 187 (333)
....-...+|++++| |.=.+. .+++.+++.|.+ .|-.++.++.==||.+ |.-.. .+ +.+.-.++
T Consensus 45 ~~~~~~~~Pp~i~lH--Gl~GS~-~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~S-p~~~~----h~-------~~~ma~dv 109 (315)
T KOG2382|consen 45 SSENLERAPPAIILH--GLLGSK-ENWRSVAKNLSRKLGRDVYAVDVRNHGSS-PKITV----HN-------YEAMAEDV 109 (315)
T ss_pred cccccCCCCceEEec--ccccCC-CCHHHHHHHhcccccCceEEEecccCCCC-ccccc----cC-------HHHHHHHH
Confidence 333333457777777 665555 444578888887 5889999999888877 11111 11 23344556
Q ss_pred HHHHHHHHHhcCCCeeeEeeechhH-HHHHHhhhcCCCceeeeccc
Q 019962 188 RCLLHWLEWEAGFGKMGVCGLSMGG-VHAAMVGSLHPTPVATLPFL 232 (333)
Q Consensus 188 r~ll~wl~~~~g~~~vgv~G~SMGG-~~Asl~A~~~P~~v~~vp~~ 232 (333)
..++++.+......++.+.|+|||| .++.+.+..+|..+..+.+.
T Consensus 110 ~~Fi~~v~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~ 155 (315)
T KOG2382|consen 110 KLFIDGVGGSTRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVE 155 (315)
T ss_pred HHHHHHcccccccCCceecccCcchHHHHHHHHHhcCcccceeEEE
Confidence 7777777633368999999999999 88888888999866655543
No 95
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.74 E-value=0.00047 Score=69.65 Aligned_cols=137 Identities=15% Similarity=0.044 Sum_probs=78.2
Q ss_pred ccCeEEEeeeeeCCCcccccCCCCccccceeEEEeecCCCC-CCCceEEEEecCCCChhHHHhh---hhchHHHhcCcc-
Q 019962 74 TQTAVLREGVFRTPCDEQLMSALPPESHNARVAFLAPKCVP-PQKMACVVHLAGTGDHTFERRL---RLGGPLLKENIA- 148 (333)
Q Consensus 74 ~~~~~~~~g~F~Sp~~~~~p~~lp~~s~~a~~~~~~p~~~~-~~~~v~viH~aG~Gd~~~~~r~---~la~pL~~~Gi~- 148 (333)
...+++..-.|.|+. -...-+..+++|.... ...||+ +.+.|- .|.... .....|.++|.-
T Consensus 175 v~~g~~~~~~~~S~~----------Lg~~r~v~VY~P~~y~~~~~Pvl-yllDG~---~w~~~~~~~~~ld~li~~g~i~ 240 (411)
T PRK10439 175 APESPAKEIIWKSER----------LGNSRRVWIYTTGDAAPEERPLA-ILLDGQ---FWAESMPVWPALDSLTHRGQLP 240 (411)
T ss_pred CCCCceEEEEEEccc----------cCCceEEEEEECCCCCCCCCCEE-EEEECH---HhhhcCCHHHHHHHHHHcCCCC
Confidence 345666777787772 1244567788887653 346765 333442 232222 245566666633
Q ss_pred EEEeecccC--CCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHHhcC----CCeeeEeeechhHHHHHHhhhcC
Q 019962 149 TMVLESPFY--GQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEWEAG----FGKMGVCGLSMGGVHAAMVGSLH 222 (333)
Q Consensus 149 ~ill~~Py~--G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~~~g----~~~vgv~G~SMGG~~Asl~A~~~ 222 (333)
-+++-++-. +..+... ......+.+ ++ +..|+-|++++.. -++.+|+|.||||..|..+|..+
T Consensus 241 P~ivV~id~~~~~~R~~e--l~~~~~f~~-~l--------~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~ 309 (411)
T PRK10439 241 PAVYLLIDAIDTTHRSQE--LPCNADFWL-AV--------QQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHW 309 (411)
T ss_pred ceEEEEECCCCccccccc--CCchHHHHH-HH--------HHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhC
Confidence 122223322 2222221 111001100 01 1577788874323 36789999999999999999999
Q ss_pred CCceeeecccCCC
Q 019962 223 PTPVATLPFLSPH 235 (333)
Q Consensus 223 P~~v~~vp~~~~~ 235 (333)
|+..+.+.++|++
T Consensus 310 Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 310 PERFGCVLSQSGS 322 (411)
T ss_pred cccccEEEEeccc
Confidence 9999999888754
No 96
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=97.72 E-value=0.00019 Score=65.22 Aligned_cols=152 Identities=20% Similarity=0.223 Sum_probs=78.2
Q ss_pred EEecCCCChhHHHhh-hhchHHHhcCcc--EEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHHhc
Q 019962 122 VHLAGTGDHTFERRL-RLGGPLLKENIA--TMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEWEA 198 (333)
Q Consensus 122 iH~aG~Gd~~~~~r~-~la~pL~~~Gi~--~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~~~ 198 (333)
|.+||+.-++...-. .+.+.+.+.|.. +..++.|.+ |. .. + ..+.+.++ +.
T Consensus 3 lYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~~----p~-------~a-----------~---~~l~~~i~-~~ 56 (187)
T PF05728_consen 3 LYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPPF----PE-------EA-----------I---AQLEQLIE-EL 56 (187)
T ss_pred EEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCcC----HH-------HH-----------H---HHHHHHHH-hC
Confidence 455588866654433 456666665544 444433322 11 11 1 34455555 45
Q ss_pred CCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCccccccccccccCccHHHHHHHHHhhhhcCCHHHHHHHHHHh
Q 019962 199 GFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAVVAFCEGILKHGTAWEALREELAAKKVAMTLEEVRERMRNV 278 (333)
Q Consensus 199 g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta~~vfteGvl~~~~~w~~L~~~l~~~~~~lt~~~a~~rl~~~ 278 (333)
+-+.+.|+|-||||+.|..+|..++-+. ++ +. +++. .|+.+++.+..+...-+.+ ....-..-
T Consensus 57 ~~~~~~liGSSlGG~~A~~La~~~~~~a-vL--iN-----Pav~--------p~~~l~~~iG~~~~~~~~e-~~~~~~~~ 119 (187)
T PF05728_consen 57 KPENVVLIGSSLGGFYATYLAERYGLPA-VL--IN-----PAVR--------PYELLQDYIGEQTNPYTGE-SYELTEEH 119 (187)
T ss_pred CCCCeEEEEEChHHHHHHHHHHHhCCCE-EE--Ec-----CCCC--------HHHHHHHhhCccccCCCCc-cceechHh
Confidence 5556999999999999999999887443 22 22 2221 1233333221111100000 00000000
Q ss_pred h-ccCCCCCCCCCCCCCeEEEEEecCCccccchhhHHhhh
Q 019962 279 L-SLTDVTRFPIPKIPNAVIFVAATVSTVFDYHHEEVLKM 317 (333)
Q Consensus 279 l-~~t~l~nf~~p~dp~~ilvV~g~~D~yVP~~~~~~L~~ 317 (333)
+ +...+. ...+.+|.+++++.+++|+.++.+.+....+
T Consensus 120 ~~~l~~l~-~~~~~~~~~~lvll~~~DEvLd~~~a~~~~~ 158 (187)
T PF05728_consen 120 IEELKALE-VPYPTNPERYLVLLQTGDEVLDYREAVAKYR 158 (187)
T ss_pred hhhcceEe-ccccCCCccEEEEEecCCcccCHHHHHHHhc
Confidence 0 111110 1125667889999999999999866654443
No 97
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=97.72 E-value=0.00027 Score=66.30 Aligned_cols=177 Identities=14% Similarity=0.078 Sum_probs=112.0
Q ss_pred CceEEEEecCCCChhHHHh-hhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHH
Q 019962 117 KMACVVHLAGTGDHTFERR-LRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLE 195 (333)
Q Consensus 117 ~~v~viH~aG~Gd~~~~~r-~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~ 195 (333)
..++++| |+..|--... ..+|..|.+.||.+.+++|-..|.+ .+..+-+. +..+..|.+.+++++.
T Consensus 34 e~vvlcH--GfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS--~gsf~~Gn---------~~~eadDL~sV~q~~s 100 (269)
T KOG4667|consen 34 EIVVLCH--GFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGES--EGSFYYGN---------YNTEADDLHSVIQYFS 100 (269)
T ss_pred eEEEEee--ccccccchHHHHHHHHHHHhcCceEEEEEecCCCCc--CCccccCc---------ccchHHHHHHHHHHhc
Confidence 4555566 8875532222 2589999999999999877666655 34333333 2334477889999996
Q ss_pred HhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCccccc-----cccccccCccHHHHHHHHH--h------h
Q 019962 196 WEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAVVAF-----CEGILKHGTAWEALREELA--A------K 262 (333)
Q Consensus 196 ~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta~~vf-----teGvl~~~~~w~~L~~~l~--~------~ 262 (333)
....-==.|.|+|=||-++.+.|+.++. +..+..+|+..-..-+ .++.+. .+.++-+ . -
T Consensus 101 -~~nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~eRlg~~~l~------~ike~Gfid~~~rkG~y 172 (269)
T KOG4667|consen 101 -NSNRVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGINERLGEDYLE------RIKEQGFIDVGPRKGKY 172 (269)
T ss_pred -cCceEEEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhcchhhhhcccHHH------HHHhCCceecCcccCCc
Confidence 3222233789999999999999999986 5666666654432211 112111 1111000 0 0
Q ss_pred hhcCCHHHHHHHHHHhhccCCCCCCCCCCCCCeEEEEEecCCccccchhhHHhhhc
Q 019962 263 KVAMTLEEVRERMRNVLSLTDVTRFPIPKIPNAVIFVAATVSTVFDYHHEEVLKMD 318 (333)
Q Consensus 263 ~~~lt~~~a~~rl~~~l~~t~l~nf~~p~dp~~ilvV~g~~D~yVP~~~~~~L~~~ 318 (333)
+..+|++-.-+++...+..+.+ ..++. =+++-|.|..|+.||-+.+..+.++
T Consensus 173 ~~rvt~eSlmdrLntd~h~acl---kId~~-C~VLTvhGs~D~IVPve~AkefAk~ 224 (269)
T KOG4667|consen 173 GYRVTEESLMDRLNTDIHEACL---KIDKQ-CRVLTVHGSEDEIVPVEDAKEFAKI 224 (269)
T ss_pred CceecHHHHHHHHhchhhhhhc---CcCcc-CceEEEeccCCceeechhHHHHHHh
Confidence 1146677777788877766655 22333 1488899999999999999888765
No 98
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=97.72 E-value=0.00098 Score=69.89 Aligned_cols=119 Identities=14% Similarity=0.150 Sum_probs=77.1
Q ss_pred ccceeEEEeecCCC-CCCCceEEEEecCCCChhHHH----hhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhh
Q 019962 100 SHNARVAFLAPKCV-PPQKMACVVHLAGTGDHTFER----RLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVS 174 (333)
Q Consensus 100 s~~a~~~~~~p~~~-~~~~~v~viH~aG~Gd~~~~~----r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vs 174 (333)
+.....--|.|..- .+.+|+++|+ ..-.-.|-. .+.+.+-|+++|+.|.+++- |.|.... ......
T Consensus 198 n~l~eLiqY~P~te~v~~~PLLIVP--p~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW-----~nP~~~~--r~~~ld 268 (560)
T TIGR01839 198 NEVLELIQYKPITEQQHARPLLVVP--PQINKFYIFDLSPEKSFVQYCLKNQLQVFIISW-----RNPDKAH--REWGLS 268 (560)
T ss_pred CCceEEEEeCCCCCCcCCCcEEEec--hhhhhhheeecCCcchHHHHHHHcCCeEEEEeC-----CCCChhh--cCCCHH
Confidence 34444444566543 3557776666 555555532 13589999999999999885 3344321 123344
Q ss_pred hHHHhhhhhHHHHHHHHHHHHHhcCCCeeeEeeechhHHHHHH----hhhcCCC-ceeeecccCC
Q 019962 175 DLLLLGRATIEEARCLLHWLEWEAGFGKMGVCGLSMGGVHAAM----VGSLHPT-PVATLPFLSP 234 (333)
Q Consensus 175 d~~~~g~~~i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl----~A~~~P~-~v~~vp~~~~ 234 (333)
|+.. .| ...++.+++..|..+|.+.|.||||.++++ .|+..++ +|..+.+++.
T Consensus 269 DYv~----~i---~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllat 326 (560)
T TIGR01839 269 TYVD----AL---KEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVS 326 (560)
T ss_pred HHHH----HH---HHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeec
Confidence 5541 12 334455554678999999999999999997 6788885 7888887763
No 99
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=97.63 E-value=0.00015 Score=65.13 Aligned_cols=97 Identities=21% Similarity=0.217 Sum_probs=62.9
Q ss_pred CceEEEEecCCCChhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHH-HHHHHHHHH
Q 019962 117 KMACVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEE-ARCLLHWLE 195 (333)
Q Consensus 117 ~~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E-~r~ll~wl~ 195 (333)
||+.|+|.+|...+.|. .+++.|-..++.++.++.|..+...|.. .++ .| +..+++.++
T Consensus 1 ~~lf~~p~~gG~~~~y~---~la~~l~~~~~~v~~i~~~~~~~~~~~~------~si-----------~~la~~y~~~I~ 60 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYR---PLARALPDDVIGVYGIEYPGRGDDEPPP------DSI-----------EELASRYAEAIR 60 (229)
T ss_dssp -EEEEESSTTCSGGGGH---HHHHHHTTTEEEEEEECSTTSCTTSHEE------SSH-----------HHHHHHHHHHHH
T ss_pred CeEEEEcCCccCHHHHH---HHHHhCCCCeEEEEEEecCCCCCCCCCC------CCH-----------HHHHHHHHHHhh
Confidence 57778996665444553 4555555446899999999988554432 111 11 255666776
Q ss_pred HhcCCCeeeEeeechhHHHHHHhhhcC---CCceeeecccC
Q 019962 196 WEAGFGKMGVCGLSMGGVHAAMVGSLH---PTPVATLPFLS 233 (333)
Q Consensus 196 ~~~g~~~vgv~G~SMGG~~Asl~A~~~---P~~v~~vp~~~ 233 (333)
.....+|..|+|.|+||.+|-.+|..- -+.+..+.++.
T Consensus 61 ~~~~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD 101 (229)
T PF00975_consen 61 ARQPEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILID 101 (229)
T ss_dssp HHTSSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEES
T ss_pred hhCCCCCeeehccCccHHHHHHHHHHHHHhhhccCceEEec
Confidence 455567999999999999999998742 33444454544
No 100
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.61 E-value=0.00039 Score=67.53 Aligned_cols=127 Identities=20% Similarity=0.163 Sum_probs=75.4
Q ss_pred cceeEEEeecCCCCCCCceEEEEecCCC--ChhHHHhhhhchHHHh-cCccEEEeecccCCCCCCCcccCcccchhhhHH
Q 019962 101 HNARVAFLAPKCVPPQKMACVVHLAGTG--DHTFERRLRLGGPLLK-ENIATMVLESPFYGQRRPLLQRGAKLLCVSDLL 177 (333)
Q Consensus 101 ~~a~~~~~~p~~~~~~~~v~viH~aG~G--d~~~~~r~~la~pL~~-~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~ 177 (333)
..-++.++.|-.-+..+|++ |-+||.+ .+++.....+ ..|++ +|+-|+.+ ..+.++-+.+-..... ..+| -
T Consensus 45 ~~r~y~l~vP~g~~~~apLv-v~LHG~~~sgag~~~~sg~-d~lAd~~gFlV~yP--dg~~~~wn~~~~~~~~-~p~~-~ 118 (312)
T COG3509 45 LKRSYRLYVPPGLPSGAPLV-VVLHGSGGSGAGQLHGTGW-DALADREGFLVAYP--DGYDRAWNANGCGNWF-GPAD-R 118 (312)
T ss_pred CccceEEEcCCCCCCCCCEE-EEEecCCCChHHhhcccch-hhhhcccCcEEECc--CccccccCCCcccccC-Cccc-c
Confidence 44456777887755555553 4444555 4445443322 34554 79999987 2333332111111000 0000 0
Q ss_pred HhhhhhHHHHHHHHHHHHHhcCCC--eeeEeeechhHHHHHHhhhcCCCceeeecccC
Q 019962 178 LLGRATIEEARCLLHWLEWEAGFG--KMGVCGLSMGGVHAAMVGSLHPTPVATLPFLS 233 (333)
Q Consensus 178 ~~g~~~i~E~r~ll~wl~~~~g~~--~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~ 233 (333)
-.|...|.-.|.|+.-+.++.|++ +|.|+|.|=||.||+.+++++|+.-+.+-.++
T Consensus 119 ~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VA 176 (312)
T COG3509 119 RRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVA 176 (312)
T ss_pred cCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeee
Confidence 122234455688999888777875 99999999999999999999998665554444
No 101
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=97.54 E-value=0.00011 Score=68.37 Aligned_cols=89 Identities=22% Similarity=0.304 Sum_probs=51.9
Q ss_pred CceEEEEecCCCChhHHHhhhhchHHHhcCccE---EEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHH
Q 019962 117 KMACVVHLAGTGDHTFERRLRLGGPLLKENIAT---MVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHW 193 (333)
Q Consensus 117 ~~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~---ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~w 193 (333)
+||++|| |+++..+.++..++..|.++||.+ ..++ ||...... .+... .+-...+.|.|.+++-
T Consensus 2 ~PVVlVH--G~~~~~~~~w~~~~~~l~~~GY~~~~vya~t---yg~~~~~~-------~~~~~-~~~~~~~~~l~~fI~~ 68 (219)
T PF01674_consen 2 RPVVLVH--GTGGNAYSNWSTLAPYLKAAGYCDSEVYALT---YGSGNGSP-------SVQNA-HMSCESAKQLRAFIDA 68 (219)
T ss_dssp --EEEE----TTTTTCGGCCHHHHHHHHTT--CCCEEEE-----S-CCHHT-------HHHHH-HB-HHHHHHHHHHHHH
T ss_pred CCEEEEC--CCCcchhhCHHHHHHHHHHcCCCcceeEecc---CCCCCCCC-------ccccc-ccchhhHHHHHHHHHH
Confidence 6888888 777655555557888899999994 4433 45553211 11011 1223445778888888
Q ss_pred HHHhcCCCeeeEeeechhHHHHHHhh
Q 019962 194 LEWEAGFGKMGVCGLSMGGVHAAMVG 219 (333)
Q Consensus 194 l~~~~g~~~vgv~G~SMGG~~Asl~A 219 (333)
.++..|. +|-|+|+||||.+|-...
T Consensus 69 Vl~~TGa-kVDIVgHS~G~~iaR~yi 93 (219)
T PF01674_consen 69 VLAYTGA-KVDIVGHSMGGTIARYYI 93 (219)
T ss_dssp HHHHHT---EEEEEETCHHHHHHHHH
T ss_pred HHHhhCC-EEEEEEcCCcCHHHHHHH
Confidence 8778899 999999999999887653
No 102
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=97.51 E-value=6.2e-05 Score=69.12 Aligned_cols=48 Identities=27% Similarity=0.517 Sum_probs=36.2
Q ss_pred HHHHHHHHHhcCC--CeeeEeeechhHHHHHHhhhcCCCceeeecccCCCC
Q 019962 188 RCLLHWLEWEAGF--GKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHS 236 (333)
Q Consensus 188 r~ll~wl~~~~g~--~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~t 236 (333)
...++||++...+ ++|||.|.|.||-+|.++|+..|+ +..++..+|+.
T Consensus 7 e~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~-i~avVa~~ps~ 56 (213)
T PF08840_consen 7 EEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQ-ISAVVAISPSS 56 (213)
T ss_dssp HHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSS-EEEEEEES--S
T ss_pred HHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCC-ccEEEEeCCce
Confidence 5678999943344 699999999999999999999994 55555554433
No 103
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=97.50 E-value=0.0016 Score=65.80 Aligned_cols=91 Identities=14% Similarity=0.160 Sum_probs=61.2
Q ss_pred CceEEEEecCCC-ChhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHH
Q 019962 117 KMACVVHLAGTG-DHTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLE 195 (333)
Q Consensus 117 ~~v~viH~aG~G-d~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~ 195 (333)
+.++++||--.| .+.|-+ .++....+.||+++++..=+.+..+-.. ..+++. +--.|.+..+++++
T Consensus 126 P~vvilpGltg~S~~~YVr--~lv~~a~~~G~r~VVfN~RG~~g~~LtT---pr~f~a--------g~t~Dl~~~v~~i~ 192 (409)
T KOG1838|consen 126 PIVVILPGLTGGSHESYVR--HLVHEAQRKGYRVVVFNHRGLGGSKLTT---PRLFTA--------GWTEDLREVVNHIK 192 (409)
T ss_pred cEEEEecCCCCCChhHHHH--HHHHHHHhCCcEEEEECCCCCCCCccCC---Cceeec--------CCHHHHHHHHHHHH
Confidence 444556643333 224554 7899999999999998776654442221 112222 23457799999999
Q ss_pred HhcCCCeeeEeeechhHHHHHHhhh
Q 019962 196 WEAGFGKMGVCGLSMGGVHAAMVGS 220 (333)
Q Consensus 196 ~~~g~~~vgv~G~SMGG~~Asl~A~ 220 (333)
++....++..+|.||||.+-.--=+
T Consensus 193 ~~~P~a~l~avG~S~Gg~iL~nYLG 217 (409)
T KOG1838|consen 193 KRYPQAPLFAVGFSMGGNILTNYLG 217 (409)
T ss_pred HhCCCCceEEEEecchHHHHHHHhh
Confidence 7778889999999999987665433
No 104
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.45 E-value=0.00062 Score=64.47 Aligned_cols=78 Identities=19% Similarity=0.212 Sum_probs=60.3
Q ss_pred hhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHHhcCCCeeeEeeechhHHHH
Q 019962 136 LRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEWEAGFGKMGVCGLSMGGVHA 215 (333)
Q Consensus 136 ~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~A 215 (333)
++||...+++|++|++++.=.-|+++|....++....- |+ +-+|.-+.++||++.++--+...+|+||||+..
T Consensus 47 RrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~-Dw------A~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~ 119 (281)
T COG4757 47 RRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYL-DW------ARLDFPAALAALKKALPGHPLYFVGHSFGGQAL 119 (281)
T ss_pred HHHHHHhhccCceEEEEecccccCCCccccccCccchh-hh------hhcchHHHHHHHHhhCCCCceEEeeccccceee
Confidence 37999999999999998888888888887655544222 32 223567889999876788999999999999877
Q ss_pred HHhhh
Q 019962 216 AMVGS 220 (333)
Q Consensus 216 sl~A~ 220 (333)
.+++.
T Consensus 120 gL~~~ 124 (281)
T COG4757 120 GLLGQ 124 (281)
T ss_pred ccccc
Confidence 66543
No 105
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=97.44 E-value=0.00062 Score=62.18 Aligned_cols=103 Identities=21% Similarity=0.231 Sum_probs=47.5
Q ss_pred CceEEEEecCCCChhHHHhh-hhchHHHhcCccEEEeecccCCCCCCCccc-----------CcccchhhhHH--Hhhhh
Q 019962 117 KMACVVHLAGTGDHTFERRL-RLGGPLLKENIATMVLESPFYGQRRPLLQR-----------GAKLLCVSDLL--LLGRA 182 (333)
Q Consensus 117 ~~v~viH~aG~Gd~~~~~r~-~la~pL~~~Gi~~ill~~Py~G~RkP~~q~-----------~s~l~~vsd~~--~~g~~ 182 (333)
+.++|+||.|.-..-|.... .+.+.|.+.++..+.++-|+--...|.--. ..-.+.+-+.. .-.-.
T Consensus 5 ~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~ 84 (212)
T PF03959_consen 5 PRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHEYE 84 (212)
T ss_dssp -EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGGG-
T ss_pred ceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccccc
Confidence 34556995555555565533 355556554899999999987522111000 00001110000 00012
Q ss_pred hHHHH-HHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhc
Q 019962 183 TIEEA-RCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSL 221 (333)
Q Consensus 183 ~i~E~-r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~ 221 (333)
.+.|+ +.+.+.++ ++| +=.||.|+|.|+.+|+++++.
T Consensus 85 ~~~~sl~~l~~~i~-~~G-PfdGvlGFSQGA~lAa~ll~~ 122 (212)
T PF03959_consen 85 GLDESLDYLRDYIE-ENG-PFDGVLGFSQGAALAALLLAL 122 (212)
T ss_dssp --HHHHHHHHHHHH-HH----SEEEEETHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH-hcC-CeEEEEeecHHHHHHHHHHHH
Confidence 34443 56666666 443 257999999999999999874
No 106
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=97.41 E-value=0.00086 Score=63.12 Aligned_cols=165 Identities=13% Similarity=0.123 Sum_probs=99.6
Q ss_pred CCceEEEEecCCCChhHHHhhhhchHHHh-cCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHH
Q 019962 116 QKMACVVHLAGTGDHTFERRLRLGGPLLK-ENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWL 194 (333)
Q Consensus 116 ~~~v~viH~aG~Gd~~~~~r~~la~pL~~-~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl 194 (333)
.+|.+++.-+-+|.-|+.- .+++-+.. .+.+|++++.=+||+++-..+.. +...|+++.++|+
T Consensus 77 S~pTlLyfh~NAGNmGhr~--~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~--------------GL~lDs~avldyl 140 (300)
T KOG4391|consen 77 SRPTLLYFHANAGNMGHRL--PIARVFYVNLKMNVLIVSYRGYGKSEGSPSEE--------------GLKLDSEAVLDYL 140 (300)
T ss_pred CCceEEEEccCCCcccchh--hHHHHHHHHcCceEEEEEeeccccCCCCcccc--------------ceeccHHHHHHHH
Confidence 3555555556777666533 56666665 59999999999999985443322 2345679999999
Q ss_pred HHhcC--CCeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCccccccccccccCccHHHHHHHHHhhhhcCCHHHHH
Q 019962 195 EWEAG--FGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAVVAFCEGILKHGTAWEALREELAAKKVAMTLEEVR 272 (333)
Q Consensus 195 ~~~~g--~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta~~vfteGvl~~~~~w~~L~~~l~~~~~~lt~~~a~ 272 (333)
.++.. ..++.+-|-|+||++|.-+|+.....+..+.+ +..|+ .+..+.+. +...-. + +-..+
T Consensus 141 ~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~iv------ENTF~-SIp~~~i~-------~v~p~~-~-k~i~~ 204 (300)
T KOG4391|consen 141 MTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIV------ENTFL-SIPHMAIP-------LVFPFP-M-KYIPL 204 (300)
T ss_pred hcCccCCcceEEEEecccCCeeEEEeeccchhheeeeee------echhc-cchhhhhh-------eeccch-h-hHHHH
Confidence 85443 48999999999999999999987765554432 22222 11111110 000000 0 00011
Q ss_pred HHHHHhh-ccCCCCCCCCCCCCCeEEEEEecCCccccchhhHHhhh
Q 019962 273 ERMRNVL-SLTDVTRFPIPKIPNAVIFVAATVSTVFDYHHEEVLKM 317 (333)
Q Consensus 273 ~rl~~~l-~~t~l~nf~~p~dp~~ilvV~g~~D~yVP~~~~~~L~~ 317 (333)
--.++.+ +...+ ....-| .+++.|..|+.||+-.++.|-.
T Consensus 205 lc~kn~~~S~~ki---~~~~~P--~LFiSGlkDelVPP~~Mr~Ly~ 245 (300)
T KOG4391|consen 205 LCYKNKWLSYRKI---GQCRMP--FLFISGLKDELVPPVMMRQLYE 245 (300)
T ss_pred HHHHhhhcchhhh---ccccCc--eEEeecCccccCCcHHHHHHHH
Confidence 1122222 22222 122224 8999999999999999888754
No 107
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=97.37 E-value=0.0016 Score=62.25 Aligned_cols=109 Identities=17% Similarity=0.158 Sum_probs=76.2
Q ss_pred EeecCCCCCCCceEEEEecCCCChhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHH
Q 019962 107 FLAPKCVPPQKMACVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEE 186 (333)
Q Consensus 107 ~~~p~~~~~~~~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E 186 (333)
++.|.. ...-||+ +..+|++....+ +..+.+.++..||-|+.++.-..+. +. ....+..
T Consensus 8 v~~P~~-~g~yPVv-~f~~G~~~~~s~-Ys~ll~hvAShGyIVV~~d~~~~~~--~~----------------~~~~~~~ 66 (259)
T PF12740_consen 8 VYYPSS-AGTYPVV-LFLHGFLLINSW-YSQLLEHVASHGYIVVAPDLYSIGG--PD----------------DTDEVAS 66 (259)
T ss_pred EEecCC-CCCcCEE-EEeCCcCCCHHH-HHHHHHHHHhCceEEEEecccccCC--CC----------------cchhHHH
Confidence 455655 2446664 667799855444 4478999999999999988322111 11 1124555
Q ss_pred HHHHHHHHHHh----------cCCCeeeEeeechhHHHHHHhhhcC-----CCceeeecccCCCC
Q 019962 187 ARCLLHWLEWE----------AGFGKMGVCGLSMGGVHAAMVGSLH-----PTPVATLPFLSPHS 236 (333)
Q Consensus 187 ~r~ll~wl~~~----------~g~~~vgv~G~SMGG~~Asl~A~~~-----P~~v~~vp~~~~~t 236 (333)
++.+++|+.+. ....+++|.|+|=||-+|..+|... +..+..+.++.|..
T Consensus 67 ~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 67 AAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred HHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 68899998631 1346999999999999999999877 55788888888766
No 108
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=97.27 E-value=0.002 Score=62.38 Aligned_cols=178 Identities=17% Similarity=0.162 Sum_probs=99.6
Q ss_pred CceEEEEecCCCChhHHHhhhhchHHHhcCccEEEeecccCCCC-CCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHH
Q 019962 117 KMACVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQR-RPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLE 195 (333)
Q Consensus 117 ~~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~R-kP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~ 195 (333)
.+|+-+| |...|-+.+ +.+..+|.+.|+++|....|++|.. +|++|.+.-.... .-....|+
T Consensus 36 gTVv~~h--GsPGSH~DF-kYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~--------------~~~~~ll~ 98 (297)
T PF06342_consen 36 GTVVAFH--GSPGSHNDF-KYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQ--------------NFVNALLD 98 (297)
T ss_pred eeEEEec--CCCCCccch-hhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHH--------------HHHHHHHH
Confidence 3555566 666554444 2467788889999999999999998 7777766554221 12223333
Q ss_pred HhcCC-CeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCcccccccccccc----CccH--HHHHHHH-------Hh
Q 019962 196 WEAGF-GKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAVVAFCEGILKH----GTAW--EALREEL-------AA 261 (333)
Q Consensus 196 ~~~g~-~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta~~vfteGvl~~----~~~w--~~L~~~l-------~~ 261 (333)
+.++ +++...|+|.|+-.|..+|+..| .++.+ ++.|..- ..-.|+-.. .++| +.+.+-+ .+
T Consensus 99 -~l~i~~~~i~~gHSrGcenal~la~~~~-~~g~~-lin~~G~--r~HkgIrp~~r~~~i~~l~~~lp~~~~~~i~~~~y 173 (297)
T PF06342_consen 99 -ELGIKGKLIFLGHSRGCENALQLAVTHP-LHGLV-LINPPGL--RPHKGIRPLSRMETINYLYDLLPRFIINAIMYFYY 173 (297)
T ss_pred -HcCCCCceEEEEeccchHHHHHHHhcCc-cceEE-EecCCcc--ccccCcCHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 5554 88999999999999999999996 44433 3432211 111221110 1111 2221100 01
Q ss_pred hhhc--C-CHHHHHHHHHHhh--ccCCCCCCCC-C-CCCCeEEEEEecCCccccchhhHHhh
Q 019962 262 KKVA--M-TLEEVRERMRNVL--SLTDVTRFPI-P-KIPNAVIFVAATVSTVFDYHHEEVLK 316 (333)
Q Consensus 262 ~~~~--l-t~~~a~~rl~~~l--~~t~l~nf~~-p-~dp~~ilvV~g~~D~yVP~~~~~~L~ 316 (333)
+... + +-+++-..++-++ .+..-..|-. . ..+-+++++.|.+|-.|--+-..+..
T Consensus 174 ~~iG~KV~~GeeA~na~r~m~~~df~~q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a 235 (297)
T PF06342_consen 174 RMIGFKVSDGEEAINAMRSMQNCDFEEQKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFA 235 (297)
T ss_pred HHhCeeecChHHHHHHHHHHHhcCHHHHHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHH
Confidence 1110 1 1245555555444 2221111111 1 12347999999999999877776653
No 109
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=97.24 E-value=0.0021 Score=69.78 Aligned_cols=190 Identities=13% Similarity=0.150 Sum_probs=97.8
Q ss_pred cceeEEEeecCCCCC-CCceEEEEecCCCCh-h-HHHhh-hhchHHH-hcCccEEEeecccCCCCCCCcccCcccchhhh
Q 019962 101 HNARVAFLAPKCVPP-QKMACVVHLAGTGDH-T-FERRL-RLGGPLL-KENIATMVLESPFYGQRRPLLQRGAKLLCVSD 175 (333)
Q Consensus 101 ~~a~~~~~~p~~~~~-~~~v~viH~aG~Gd~-~-~~~r~-~la~pL~-~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd 175 (333)
-+++++.++|....+ .+.+|++|..|.-++ . ..... .....++ ..|+.|+.++- |-..++.......+
T Consensus 508 ~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~-----RGs~~~G~~~~~~~-- 580 (755)
T KOG2100|consen 508 ITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDG-----RGSGGYGWDFRSAL-- 580 (755)
T ss_pred EEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcC-----CCcCCcchhHHHHh--
Confidence 367788889988753 243344444444432 1 11111 2333344 46888888764 22222111111111
Q ss_pred HHHhhhhhHHHHHHHHHHHHHhcCC---CeeeEeeechhHHHHHHhhhcCCCceeee-cccCCCCccccccccccccCcc
Q 019962 176 LLLLGRATIEEARCLLHWLEWEAGF---GKMGVCGLSMGGVHAAMVGSLHPTPVATL-PFLSPHSAVVAFCEGILKHGTA 251 (333)
Q Consensus 176 ~~~~g~~~i~E~r~ll~wl~~~~g~---~~vgv~G~SMGG~~Asl~A~~~P~~v~~v-p~~~~~ta~~vfteGvl~~~~~ 251 (333)
.--.|...+.|.-....++. +.++ .+|+|.|.|-||++++.+...+|..+.++ ..++|.|--. +++.+-.
T Consensus 581 ~~~lG~~ev~D~~~~~~~~~-~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~-~yds~~t---- 654 (755)
T KOG2100|consen 581 PRNLGDVEVKDQIEAVKKVL-KLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL-YYDSTYT---- 654 (755)
T ss_pred hhhcCCcchHHHHHHHHHHH-hcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee-eeccccc----
Confidence 11234345555444444444 3444 99999999999999999999999555444 6676665422 3222211
Q ss_pred HHHHHHHHHhhhhcCCHHHHHHHHHHhhccCCCCCCCCCCCCCeEEEEEecCCccccchhhHHhhh
Q 019962 252 WEALREELAAKKVAMTLEEVRERMRNVLSLTDVTRFPIPKIPNAVIFVAATVSTVFDYHHEEVLKM 317 (333)
Q Consensus 252 w~~L~~~l~~~~~~lt~~~a~~rl~~~l~~t~l~nf~~p~dp~~ilvV~g~~D~yVP~~~~~~L~~ 317 (333)
++... .... .+...++ .-...+..++ +.++ .|++.|+.|.-|+.+++..|.+
T Consensus 655 -erymg---~p~~---~~~~y~e---~~~~~~~~~~---~~~~-~LliHGt~DdnVh~q~s~~~~~ 706 (755)
T KOG2100|consen 655 -ERYMG---LPSE---NDKGYEE---SSVSSPANNI---KTPK-LLLIHGTEDDNVHFQQSAILIK 706 (755)
T ss_pred -HhhcC---CCcc---ccchhhh---ccccchhhhh---ccCC-EEEEEcCCcCCcCHHHHHHHHH
Confidence 11100 0000 0001111 1111112112 2232 8999999999999988877663
No 110
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=97.18 E-value=0.014 Score=59.18 Aligned_cols=92 Identities=14% Similarity=0.143 Sum_probs=58.5
Q ss_pred ecCCCChhHHHhhhhchHHHhcCccEEEeecccCCCC-CCCcc-cCcccchhhhHHHhhhhhHHHHHHHHHHHHHhcCCC
Q 019962 124 LAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQR-RPLLQ-RGAKLLCVSDLLLLGRATIEEARCLLHWLEWEAGFG 201 (333)
Q Consensus 124 ~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~R-kP~~q-~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~~~g~~ 201 (333)
.+-.-.|.|-.-+.+.+.|+. |++|.+.+ +..-| .|..+ ......++ ..+.+.++ ..|.+
T Consensus 108 V~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~D--W~~p~~vp~~~~~f~ldDYi--------------~~l~~~i~-~~G~~ 169 (406)
T TIGR01849 108 VAPMSGHYATLLRSTVEALLP-DHDVYITD--WVNARMVPLSAGKFDLEDYI--------------DYLIEFIR-FLGPD 169 (406)
T ss_pred EcCCchHHHHHHHHHHHHHhC-CCcEEEEe--CCCCCCCchhcCCCCHHHHH--------------HHHHHHHH-HhCCC
Confidence 344446666665578999999 99999965 33334 22222 22222333 24555556 56777
Q ss_pred eeeEeeechhHHHHHHhhhc-----CCCceeeecccCC
Q 019962 202 KMGVCGLSMGGVHAAMVGSL-----HPTPVATLPFLSP 234 (333)
Q Consensus 202 ~vgv~G~SMGG~~Asl~A~~-----~P~~v~~vp~~~~ 234 (333)
+.|.|.+|||..+..+++. +|..+..+.+|++
T Consensus 170 -v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~ 206 (406)
T TIGR01849 170 -IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGG 206 (406)
T ss_pred -CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEec
Confidence 9999999999986655543 4666777777763
No 111
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.13 E-value=0.0033 Score=61.11 Aligned_cols=111 Identities=14% Similarity=0.114 Sum_probs=68.5
Q ss_pred CCccccceeEEEeecCCCCCCCceEEEEecCCCCh--hHHHhhhhchHHHh-cCccEEEeecccCCCCCCCcccCcccch
Q 019962 96 LPPESHNARVAFLAPKCVPPQKMACVVHLAGTGDH--TFERRLRLGGPLLK-ENIATMVLESPFYGQRRPLLQRGAKLLC 172 (333)
Q Consensus 96 lp~~s~~a~~~~~~p~~~~~~~~v~viH~aG~Gd~--~~~~r~~la~pL~~-~Gi~~ill~~Py~G~RkP~~q~~s~l~~ 172 (333)
.+-+++.-.|+.|.-.--..+-|+ ++.+||.|-+ +|.. +|..|.. .--+++.+++=.||..|-++..
T Consensus 53 v~i~~~~~t~n~Y~t~~~~t~gpi-l~l~HG~G~S~LSfA~---~a~el~s~~~~r~~a~DlRgHGeTk~~~e~------ 122 (343)
T KOG2564|consen 53 VSIDGSDLTFNVYLTLPSATEGPI-LLLLHGGGSSALSFAI---FASELKSKIRCRCLALDLRGHGETKVENED------ 122 (343)
T ss_pred cccCCCcceEEEEEecCCCCCccE-EEEeecCcccchhHHH---HHHHHHhhcceeEEEeeccccCccccCChh------
Confidence 334445546776653221234454 3455566644 4553 5666664 4567789999999999665431
Q ss_pred hhhHHHhhhhhHHHHHHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhc
Q 019962 173 VSDLLLLGRATIEEARCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSL 221 (333)
Q Consensus 173 vsd~~~~g~~~i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~ 221 (333)
| ..--+.+-|.-+++..+- ....++|.|+|+||||.+|...|..
T Consensus 123 --d--lS~eT~~KD~~~~i~~~f-ge~~~~iilVGHSmGGaIav~~a~~ 166 (343)
T KOG2564|consen 123 --D--LSLETMSKDFGAVIKELF-GELPPQIILVGHSMGGAIAVHTAAS 166 (343)
T ss_pred --h--cCHHHHHHHHHHHHHHHh-ccCCCceEEEeccccchhhhhhhhh
Confidence 1 111123445556666664 4567999999999999999877654
No 112
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=97.13 E-value=0.0021 Score=59.81 Aligned_cols=42 Identities=31% Similarity=0.294 Sum_probs=30.8
Q ss_pred cCCCeeeEeeechhHHHHHHhhhcCC---CceeeecccC-CCCccc
Q 019962 198 AGFGKMGVCGLSMGGVHAAMVGSLHP---TPVATLPFLS-PHSAVV 239 (333)
Q Consensus 198 ~g~~~vgv~G~SMGG~~Asl~A~~~P---~~v~~vp~~~-~~ta~~ 239 (333)
.+..+|.|+|+||||.+|-.+....+ +.+..+..++ |+...+
T Consensus 82 ~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 82 PPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGSP 127 (225)
T ss_pred CCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCcc
Confidence 46799999999999999988876544 4566666665 444444
No 113
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.12 E-value=0.018 Score=60.03 Aligned_cols=114 Identities=25% Similarity=0.284 Sum_probs=64.4
Q ss_pred cceeEEEeecCCCC---CCCceEEE-----EecCCCChhHHHhhhhchHHHhcCccEEEeecccCCCCCCCc-ccCcccc
Q 019962 101 HNARVAFLAPKCVP---PQKMACVV-----HLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQRRPLL-QRGAKLL 171 (333)
Q Consensus 101 ~~a~~~~~~p~~~~---~~~~v~vi-----H~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~-q~~s~l~ 171 (333)
+.+-.+++-|.... .+||++|| |++|-| +|-.-..+...| ++|.-|+...+ .+.|.. | -+.
T Consensus 50 NYaLlrI~pp~~~~~d~~krP~vViDPRAGHGpGIG--GFK~dSevG~AL-~~GHPvYFV~F----~p~P~pgQ---Tl~ 119 (581)
T PF11339_consen 50 NYALLRITPPEGVPVDPTKRPFVVIDPRAGHGPGIG--GFKPDSEVGVAL-RAGHPVYFVGF----FPEPEPGQ---TLE 119 (581)
T ss_pred ceeEEEeECCCCCCCCCCCCCeEEeCCCCCCCCCcc--CCCcccHHHHHH-HcCCCeEEEEe----cCCCCCCC---cHH
Confidence 33444444444332 24777766 655555 665533444444 45888887665 233332 2 122
Q ss_pred hhhhHHHhhhhhHHHHHHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccC
Q 019962 172 CVSDLLLLGRATIEEARCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLS 233 (333)
Q Consensus 172 ~vsd~~~~g~~~i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~ 233 (333)
.| . -.|++-+-.-.+-..+.++..|+|+.=||++++|+|+.+|+.++.+.+-+
T Consensus 120 DV---~------~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaG 172 (581)
T PF11339_consen 120 DV---M------RAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAG 172 (581)
T ss_pred HH---H------HHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecC
Confidence 22 1 11222221112102245699999999999999999999999888877654
No 114
>COG0400 Predicted esterase [General function prediction only]
Probab=97.05 E-value=0.0057 Score=56.63 Aligned_cols=85 Identities=19% Similarity=0.132 Sum_probs=60.1
Q ss_pred HHHHHHHHhcCC--CeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCccccccccccccCccHHHHHHHHHhhhhcC
Q 019962 189 CLLHWLEWEAGF--GKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAVVAFCEGILKHGTAWEALREELAAKKVAM 266 (333)
Q Consensus 189 ~ll~wl~~~~g~--~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta~~vfteGvl~~~~~w~~L~~~l~~~~~~l 266 (333)
.+..+.+ +.|. +++.+.|+|=|+.+|+-+...+|.+...+.++++.-+-..
T Consensus 86 ~l~~~~~-~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~-------------------------- 138 (207)
T COG0400 86 FLEELAE-EYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEP-------------------------- 138 (207)
T ss_pred HHHHHHH-HhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCC--------------------------
Confidence 3444444 6676 9999999999999999999999987777666553322000
Q ss_pred CHHHHHHHHHHhhccCCCCCCCCCCCCCeEEEEEecCCccccchhhHHhhhcc
Q 019962 267 TLEEVRERMRNVLSLTDVTRFPIPKIPNAVIFVAATVSTVFDYHHEEVLKMDS 319 (333)
Q Consensus 267 t~~~a~~rl~~~l~~t~l~nf~~p~dp~~ilvV~g~~D~yVP~~~~~~L~~~~ 319 (333)
. -.+...-.+|+++.|++|..+|...+.+|.+.=
T Consensus 139 ---------------~----~~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l 172 (207)
T COG0400 139 ---------------E----LLPDLAGTPILLSHGTEDPVVPLALAEALAEYL 172 (207)
T ss_pred ---------------c----cccccCCCeEEEeccCcCCccCHHHHHHHHHHH
Confidence 0 011111235999999999999999999887653
No 115
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=97.01 E-value=0.0057 Score=58.27 Aligned_cols=112 Identities=15% Similarity=0.151 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhc------CCCceeeecccCCCCccccccccccccCccHHHHHHHH
Q 019962 186 EARCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSL------HPTPVATLPFLSPHSAVVAFCEGILKHGTAWEALREEL 259 (333)
Q Consensus 186 E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~------~P~~v~~vp~~~~~ta~~vfteGvl~~~~~w~~L~~~l 259 (333)
=.+.++.+|+++.++.++-++|+||||..+.-.... .| .+.++..+|+..-+.....-... . ..+.+
T Consensus 88 wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P-~l~K~V~Ia~pfng~~~~~~~~~--~--~~~~~-- 160 (255)
T PF06028_consen 88 WLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLP-KLNKLVTIAGPFNGILGMNDDQN--Q--NDLNK-- 160 (255)
T ss_dssp HHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS--EEEEEEEES--TTTTTCCSC-TT--T--T-CST--
T ss_pred HHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCc-ccceEEEeccccCccccccccch--h--hhhcc--
Confidence 357888899877799999999999999988766543 34 34555555532221111000000 0 00000
Q ss_pred HhhhhcCCHHHHHHHHHHhh-c-cCCCCCCCCCCCCCeEEEEEec------CCccccchhhHHhh
Q 019962 260 AAKKVAMTLEEVRERMRNVL-S-LTDVTRFPIPKIPNAVIFVAAT------VSTVFDYHHEEVLK 316 (333)
Q Consensus 260 ~~~~~~lt~~~a~~rl~~~l-~-~t~l~nf~~p~dp~~ilvV~g~------~D~yVP~~~~~~L~ 316 (333)
..+.. .-+.++.++ . .. +|++.+. ++-|.|. .|..||..+++.|.
T Consensus 161 -~gp~~-----~~~~y~~l~~~~~~---~~p~~i~---VLnI~G~~~~g~~sDG~V~~~Ss~sl~ 213 (255)
T PF06028_consen 161 -NGPKS-----MTPMYQDLLKNRRK---NFPKNIQ---VLNIYGDLEDGSNSDGIVPNASSLSLR 213 (255)
T ss_dssp -T-BSS-------HHHHHHHHTHGG---GSTTT-E---EEEEEEESBTTCSBTSSSBHHHHCTHH
T ss_pred -cCCcc-----cCHHHHHHHHHHHh---hCCCCeE---EEEEecccCCCCCCCeEEeHHHHHHHH
Confidence 00011 123334444 2 22 2344444 8999998 99999999988654
No 116
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=96.97 E-value=0.0018 Score=60.81 Aligned_cols=83 Identities=19% Similarity=0.335 Sum_probs=56.4
Q ss_pred hhhchHHHhcCccEEEeecccCCCC-CCCcccCcccchhhhHHHhhhh---hHHHHHHHHHHHHHhcC-CCeeeEeeech
Q 019962 136 LRLGGPLLKENIATMVLESPFYGQR-RPLLQRGAKLLCVSDLLLLGRA---TIEEARCLLHWLEWEAG-FGKMGVCGLSM 210 (333)
Q Consensus 136 ~~la~pL~~~Gi~~ill~~Py~G~R-kP~~q~~s~l~~vsd~~~~g~~---~i~E~r~ll~wl~~~~g-~~~vgv~G~SM 210 (333)
+..|..++.+||.|+++++ |-|.- .|.+|.. .. +-+..+.. ...+.+.++.||+ ..| ..+||++|..|
T Consensus 57 r~~Adk~A~~Gy~v~vPD~-~~Gdp~~~~~~~~----~~-~~w~~~~~~~~~~~~i~~v~k~lk-~~g~~kkIGv~GfCw 129 (242)
T KOG3043|consen 57 REGADKVALNGYTVLVPDF-FRGDPWSPSLQKS----ER-PEWMKGHSPPKIWKDITAVVKWLK-NHGDSKKIGVVGFCW 129 (242)
T ss_pred HHHHHHHhcCCcEEEcchh-hcCCCCCCCCChh----hh-HHHHhcCCcccchhHHHHHHHHHH-HcCCcceeeEEEEee
Confidence 3578888889999999886 44533 3332311 11 22222222 5778899999999 788 79999999999
Q ss_pred hHHHHHHhhhcCCCc
Q 019962 211 GGVHAAMVGSLHPTP 225 (333)
Q Consensus 211 GG~~Asl~A~~~P~~ 225 (333)
||-.+--.-..+|+.
T Consensus 130 Gak~vv~~~~~~~~f 144 (242)
T KOG3043|consen 130 GAKVVVTLSAKDPEF 144 (242)
T ss_pred cceEEEEeeccchhh
Confidence 997665555555543
No 117
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=96.92 E-value=0.0017 Score=66.41 Aligned_cols=87 Identities=18% Similarity=0.138 Sum_probs=57.3
Q ss_pred hHHHhhhhchHHHhcCccEEEeecccCCCC-CCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHHhcCCCeeeEeeec
Q 019962 131 TFERRLRLGGPLLKENIATMVLESPFYGQR-RPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEWEAGFGKMGVCGLS 209 (333)
Q Consensus 131 ~~~~r~~la~pL~~~Gi~~ill~~Py~G~R-kP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~~~g~~~vgv~G~S 209 (333)
.||. .+...|.+.||.. ..+++.+|.- |+..+ ..+ .+.+.+.++.-+.++.|..++.|+|+|
T Consensus 108 ~~~~--~li~~L~~~GY~~-~~dL~g~gYDwR~~~~-------~~~-------~~~~Lk~lIe~~~~~~g~~kV~LVGHS 170 (440)
T PLN02733 108 YYFH--DMIEQLIKWGYKE-GKTLFGFGYDFRQSNR-------LPE-------TMDGLKKKLETVYKASGGKKVNIISHS 170 (440)
T ss_pred HHHH--HHHHHHHHcCCcc-CCCcccCCCCcccccc-------HHH-------HHHHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 4444 7888999999865 5566666553 22211 111 123345555555436788999999999
Q ss_pred hhHHHHHHhhhcCCC----ceeeecccCC
Q 019962 210 MGGVHAAMVGSLHPT----PVATLPFLSP 234 (333)
Q Consensus 210 MGG~~Asl~A~~~P~----~v~~vp~~~~ 234 (333)
|||.+|..++..+|+ -|..+.++|+
T Consensus 171 MGGlva~~fl~~~p~~~~k~I~~~I~la~ 199 (440)
T PLN02733 171 MGGLLVKCFMSLHSDVFEKYVNSWIAIAA 199 (440)
T ss_pred HhHHHHHHHHHHCCHhHHhHhccEEEECC
Confidence 999999998887775 3566666664
No 118
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.88 E-value=0.0074 Score=57.26 Aligned_cols=172 Identities=19% Similarity=0.192 Sum_probs=92.1
Q ss_pred eEEEEecCCCChhHHHhhh-hchHHHhcCccEEEeecccCCCC--CCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHH
Q 019962 119 ACVVHLAGTGDHTFERRLR-LGGPLLKENIATMVLESPFYGQR--RPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLE 195 (333)
Q Consensus 119 v~viH~aG~Gd~~~~~r~~-la~pL~~~Gi~~ill~~Py~G~R--kP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~ 195 (333)
++|.+-||.+.+.|..+.+ +- .-++++.++.|+.|.| +|.- ... ..|.+-+.
T Consensus 10 L~cfP~AGGsa~~fr~W~~~lp-----~~iel~avqlPGR~~r~~ep~~------~di--------------~~Lad~la 64 (244)
T COG3208 10 LFCFPHAGGSASLFRSWSRRLP-----ADIELLAVQLPGRGDRFGEPLL------TDI--------------ESLADELA 64 (244)
T ss_pred EEEecCCCCCHHHHHHHHhhCC-----chhheeeecCCCcccccCCccc------ccH--------------HHHHHHHH
Confidence 3468989998887755432 21 1489999999999999 3331 222 23333332
Q ss_pred Hhc----CCCeeeEeeechhHHHHHHhhhcCCC----ceeeecccCCCCccccc-cccccccCccHHHHHHHHH----hh
Q 019962 196 WEA----GFGKMGVCGLSMGGVHAAMVGSLHPT----PVATLPFLSPHSAVVAF-CEGILKHGTAWEALREELA----AK 262 (333)
Q Consensus 196 ~~~----g~~~vgv~G~SMGG~~Asl~A~~~P~----~v~~vp~~~~~ta~~vf-teGvl~~~~~w~~L~~~l~----~~ 262 (333)
.+. --.|.++.|+||||.+|-.+|-..-+ +.+. .++++.| +.. ..+-++...+ +.+-+++. .+
T Consensus 65 ~el~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~l--fisg~~a-P~~~~~~~i~~~~D-~~~l~~l~~lgG~p 140 (244)
T COG3208 65 NELLPPLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRAL--FISGCRA-PHYDRGKQIHHLDD-ADFLADLVDLGGTP 140 (244)
T ss_pred HHhccccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceE--EEecCCC-CCCcccCCccCCCH-HHHHHHHHHhCCCC
Confidence 111 13689999999999999999864321 2222 2333333 222 1122222222 22222221 11
Q ss_pred hhcCCHHHHHHHHHHhh----ccCCCCCCCC--CCCCCeEEEEEecCCccccchhhHHhhhccc
Q 019962 263 KVAMTLEEVRERMRNVL----SLTDVTRFPI--PKIPNAVIFVAATVSTVFDYHHEEVLKMDSQ 320 (333)
Q Consensus 263 ~~~lt~~~a~~rl~~~l----~~t~l~nf~~--p~dp~~ilvV~g~~D~yVP~~~~~~L~~~~~ 320 (333)
...+.+.|..+.+-=++ ....=-+|.+ |++ -+|.++.|++|..|-.+.+..-.+..+
T Consensus 141 ~e~led~El~~l~LPilRAD~~~~e~Y~~~~~~pl~-~pi~~~~G~~D~~vs~~~~~~W~~~t~ 203 (244)
T COG3208 141 PELLEDPELMALFLPILRADFRALESYRYPPPAPLA-CPIHAFGGEKDHEVSRDELGAWREHTK 203 (244)
T ss_pred hHHhcCHHHHHHHHHHHHHHHHHhcccccCCCCCcC-cceEEeccCcchhccHHHHHHHHHhhc
Confidence 12233333433322222 1111112222 444 249999999999999998886666555
No 119
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=96.87 E-value=0.0037 Score=61.54 Aligned_cols=106 Identities=16% Similarity=0.137 Sum_probs=58.2
Q ss_pred CceEEEEecCCCChh---HHHhhhhchHHHh---cCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHH
Q 019962 117 KMACVVHLAGTGDHT---FERRLRLGGPLLK---ENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCL 190 (333)
Q Consensus 117 ~~v~viH~aG~Gd~~---~~~r~~la~pL~~---~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~l 190 (333)
+++++|| |+.+.. -|.. .+.+.+++ .+++||+++--.... .. + ...+.+.-. .-.....+
T Consensus 72 pt~iiiH--Gw~~~~~~~~~~~-~~~~all~~~~~d~NVI~VDWs~~a~--~~---Y--~~a~~n~~~----vg~~la~~ 137 (331)
T PF00151_consen 72 PTVIIIH--GWTGSGSSESWIQ-DMIKALLQKDTGDYNVIVVDWSRGAS--NN---Y--PQAVANTRL----VGRQLAKF 137 (331)
T ss_dssp EEEEEE----TT-TT-TTTHHH-HHHHHHHCC--S-EEEEEEE-HHHHS--S----H--HHHHHHHHH----HHHHHHHH
T ss_pred CeEEEEc--CcCCcccchhHHH-HHHHHHHhhccCCceEEEEcchhhcc--cc---c--cchhhhHHH----HHHHHHHH
Confidence 5556777 888666 2332 46666665 489999977632211 00 0 011111001 11234566
Q ss_pred HHHHHHhcC--CCeeeEeeechhHHHHHHhhhcCCC--ceeeecccCCCC
Q 019962 191 LHWLEWEAG--FGKMGVCGLSMGGVHAAMVGSLHPT--PVATLPFLSPHS 236 (333)
Q Consensus 191 l~wl~~~~g--~~~vgv~G~SMGG~~Asl~A~~~P~--~v~~vp~~~~~t 236 (333)
+.+|.+..| .+.|+|+|+|||+|+|..++-.-.. .++.|.-+-|..
T Consensus 138 l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAg 187 (331)
T PF00151_consen 138 LSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAG 187 (331)
T ss_dssp HHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-
T ss_pred HHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccc
Confidence 777763334 5999999999999999999987766 677766665443
No 120
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=96.83 E-value=0.003 Score=49.58 Aligned_cols=42 Identities=24% Similarity=0.341 Sum_probs=33.8
Q ss_pred ceEEEEecCCCChhHHHhhhhchHHHhcCccEEEeecccCCCCCC
Q 019962 118 MACVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQRRP 162 (333)
Q Consensus 118 ~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP 162 (333)
.++++| |.++|.- +...+|..|+++||+|+.+|..+||++..
T Consensus 18 ~v~i~H--G~~eh~~-ry~~~a~~L~~~G~~V~~~D~rGhG~S~g 59 (79)
T PF12146_consen 18 VVVIVH--GFGEHSG-RYAHLAEFLAEQGYAVFAYDHRGHGRSEG 59 (79)
T ss_pred EEEEeC--CcHHHHH-HHHHHHHHHHhCCCEEEEECCCcCCCCCC
Confidence 344555 8888765 23369999999999999999999999964
No 121
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=96.59 E-value=0.019 Score=53.31 Aligned_cols=104 Identities=17% Similarity=0.163 Sum_probs=59.2
Q ss_pred EEEecCCCChhHHHhhhhchHHHhcCccEEEeecccC----CCCCCCcccCccc---chhhhHHHhhhhhHHHHHHHHHH
Q 019962 121 VVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFY----GQRRPLLQRGAKL---LCVSDLLLLGRATIEEARCLLHW 193 (333)
Q Consensus 121 viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~----G~RkP~~q~~s~l---~~vsd~~~~g~~~i~E~r~ll~w 193 (333)
+|.++|.||++... .++.+.|--.++.=|.++.|+- ....+-..++... .+..| -...+..+...+++
T Consensus 6 Ii~LHglGDsg~~~-~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~----d~~~~~~aa~~i~~ 80 (206)
T KOG2112|consen 6 IIFLHGLGDSGSGW-AQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPE----DEEGLHRAADNIAN 80 (206)
T ss_pred EEEEecCCCCCccH-HHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccch----hhhHHHHHHHHHHH
Confidence 46666999887543 2344444446888888877754 0111111111111 11111 22334444444444
Q ss_pred HHH---hcCC--CeeeEeeechhHHHHHHhhhcCCCceeee
Q 019962 194 LEW---EAGF--GKMGVCGLSMGGVHAAMVGSLHPTPVATL 229 (333)
Q Consensus 194 l~~---~~g~--~~vgv~G~SMGG~~Asl~A~~~P~~v~~v 229 (333)
|-. +.|+ .+|++.|+||||.+|..+|..+|..++-+
T Consensus 81 Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~ 121 (206)
T KOG2112|consen 81 LIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGI 121 (206)
T ss_pred HHHHHHHcCCCccceeEcccCchHHHHHHHHhcccccccee
Confidence 432 4564 79999999999999999999887655433
No 122
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=96.48 E-value=0.012 Score=66.01 Aligned_cols=98 Identities=19% Similarity=0.103 Sum_probs=63.9
Q ss_pred CceEEEEecCCCChhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHH
Q 019962 117 KMACVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEW 196 (333)
Q Consensus 117 ~~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~ 196 (333)
+|++++|++|.+...| . .++..| ..++.++.++.|+++.+.+.. .+.... +..+++.+++
T Consensus 1069 ~~l~~lh~~~g~~~~~-~--~l~~~l-~~~~~v~~~~~~g~~~~~~~~--~~l~~l--------------a~~~~~~i~~ 1128 (1296)
T PRK10252 1069 PTLFCFHPASGFAWQF-S--VLSRYL-DPQWSIYGIQSPRPDGPMQTA--TSLDEV--------------CEAHLATLLE 1128 (1296)
T ss_pred CCeEEecCCCCchHHH-H--HHHHhc-CCCCcEEEEECCCCCCCCCCC--CCHHHH--------------HHHHHHHHHh
Confidence 5667788555443333 2 445444 347999999999998764332 111111 1445566652
Q ss_pred hcCCCeeeEeeechhHHHHHHhhhc---CCCceeeecccCC
Q 019962 197 EAGFGKMGVCGLSMGGVHAAMVGSL---HPTPVATLPFLSP 234 (333)
Q Consensus 197 ~~g~~~vgv~G~SMGG~~Asl~A~~---~P~~v~~vp~~~~ 234 (333)
..+.++..+.|.||||.+|..+|.. .++.+..+.++.+
T Consensus 1129 ~~~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1129 QQPHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred hCCCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 2345799999999999999999884 5777777777654
No 123
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=96.47 E-value=0.027 Score=60.03 Aligned_cols=150 Identities=21% Similarity=0.237 Sum_probs=89.9
Q ss_pred HHHhcCccEEEeecccCCCCCCCcccCcccchhhhH-HHhhhhhHHHHHHHHHHHHHhcCC---CeeeEeeechhHHHHH
Q 019962 141 PLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDL-LLLGRATIEEARCLLHWLEWEAGF---GKMGVCGLSMGGVHAA 216 (333)
Q Consensus 141 pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~-~~~g~~~i~E~r~ll~wl~~~~g~---~~vgv~G~SMGG~~As 216 (333)
.|+..||.|+.+|+=+--.| ++..=+-+ --||.-.++|--.-+.||.++.|+ ++|+|.|-|-||++|+
T Consensus 671 ~LaslGy~Vv~IDnRGS~hR--------GlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSl 742 (867)
T KOG2281|consen 671 RLASLGYVVVFIDNRGSAHR--------GLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSL 742 (867)
T ss_pred hhhhcceEEEEEcCCCcccc--------chhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHH
Confidence 45668999999998443333 33211111 157777888877788888866665 9999999999999999
Q ss_pred HhhhcCCCceeeecccCCCCccccccccccccCccH-HHHHHHHHhhhhcCC-HHHHHHHHHHhhccCCCCCCCCCCCCC
Q 019962 217 MVGSLHPTPVATLPFLSPHSAVVAFCEGILKHGTAW-EALREELAAKKVAMT-LEEVRERMRNVLSLTDVTRFPIPKIPN 294 (333)
Q Consensus 217 l~A~~~P~~v~~vp~~~~~ta~~vfteGvl~~~~~w-~~L~~~l~~~~~~lt-~~~a~~rl~~~l~~t~l~nf~~p~dp~ 294 (333)
+.-+.+|++-.+...=||. |.|.. |.+.+ |+-.+ +. .+|..-...-++ .|+.++ |-.|+
T Consensus 743 m~L~~~P~IfrvAIAGapV------T~W~~-YDTgYTERYMg--------~P~~nE~gY~agSV~--~~Vekl--pdepn 803 (867)
T KOG2281|consen 743 MGLAQYPNIFRVAIAGAPV------TDWRL-YDTGYTERYMG--------YPDNNEHGYGAGSVA--GHVEKL--PDEPN 803 (867)
T ss_pred HHhhcCcceeeEEeccCcc------eeeee-ecccchhhhcC--------CCccchhcccchhHH--HHHhhC--CCCCc
Confidence 9999999865554322222 22211 11111 11110 11 011111111122 223233 33467
Q ss_pred eEEEEEecCCccccchhhHHhhh
Q 019962 295 AVIFVAATVSTVFDYHHEEVLKM 317 (333)
Q Consensus 295 ~ilvV~g~~D~yVP~~~~~~L~~ 317 (333)
+.++|.|-=|+=|+..|+..|..
T Consensus 804 RLlLvHGliDENVHF~Hts~Lvs 826 (867)
T KOG2281|consen 804 RLLLVHGLIDENVHFAHTSRLVS 826 (867)
T ss_pred eEEEEecccccchhhhhHHHHHH
Confidence 89999999999999888777653
No 124
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=96.46 E-value=0.011 Score=59.01 Aligned_cols=116 Identities=16% Similarity=0.074 Sum_probs=72.3
Q ss_pred cceeEEEeecCCCCC-----CCceEEEEecCCCChhHHHhhhhchHHHhcCccEEEeecccCCCC-CCCc-ccCcccchh
Q 019962 101 HNARVAFLAPKCVPP-----QKMACVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQR-RPLL-QRGAKLLCV 173 (333)
Q Consensus 101 ~~a~~~~~~p~~~~~-----~~~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~R-kP~~-q~~s~l~~v 173 (333)
+.-..-+++|+.+.. ..|++ +.=||.|-. ......+|..|+..|+-|..++-|.-... .|.. ...... .
T Consensus 50 ~~~~v~~~~p~~~~~~~~~~~~Plv-vlshG~Gs~-~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~-~- 125 (365)
T COG4188 50 RERPVDLRLPQGGTGTVALYLLPLV-VLSHGSGSY-VTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSY-A- 125 (365)
T ss_pred CccccceeccCCCccccccCcCCeE-EecCCCCCC-ccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCccc-c-
Confidence 334455667777654 45654 555577733 22222588999999999999888874222 2211 110000 0
Q ss_pred hhHHHhhhhhHHHHHHHHHHHHHhc---C-------CCeeeEeeechhHHHHHHhhhcCCC
Q 019962 174 SDLLLLGRATIEEARCLLHWLEWEA---G-------FGKMGVCGLSMGGVHAAMVGSLHPT 224 (333)
Q Consensus 174 sd~~~~g~~~i~E~r~ll~wl~~~~---g-------~~~vgv~G~SMGG~~Asl~A~~~P~ 224 (333)
..-......|...+++||+ +. + ..+|++.|+|+||+++..++.....
T Consensus 126 ---p~~~~erp~dis~lLd~L~-~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 126 ---PAEWWERPLDISALLDALL-QLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred ---hhhhhcccccHHHHHHHHH-HhhcCcccccccCccceEEEecccccHHHHHhcccccc
Confidence 0111234556788999998 44 2 4799999999999999999886654
No 125
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=96.39 E-value=0.024 Score=56.90 Aligned_cols=114 Identities=19% Similarity=0.210 Sum_probs=74.3
Q ss_pred cCCCCCCCceEEEEecCCCCh-hHHHhhhhchHHHhc-CccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHH
Q 019962 110 PKCVPPQKMACVVHLAGTGDH-TFERRLRLGGPLLKE-NIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEA 187 (333)
Q Consensus 110 p~~~~~~~~v~viH~aG~Gd~-~~~~r~~la~pL~~~-Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~ 187 (333)
-++|.+..|+ ++.+.|=|+- .++....+...|+++ |-.++.+|-=|||++.|-+.....-.. ++.-.++++|.
T Consensus 22 ~~~~~~~gpi-fl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~----yLt~~QALaD~ 96 (434)
T PF05577_consen 22 DQYYKPGGPI-FLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLR----YLTSEQALADL 96 (434)
T ss_dssp -TT--TTSEE-EEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTT----C-SHHHHHHHH
T ss_pred hhhcCCCCCE-EEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHH----hcCHHHHHHHH
Confidence 5667666675 5788888743 455444577788884 999999999999999998653222111 13445789999
Q ss_pred HHHHHHHHHhc---CCCeeeEeeechhHHHHHHhhhcCCCceee
Q 019962 188 RCLLHWLEWEA---GFGKMGVCGLSMGGVHAAMVGSLHPTPVAT 228 (333)
Q Consensus 188 r~ll~wl~~~~---g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~ 228 (333)
..++.+++.+. ...|+.+.|-|-||.+|+-+-..+|+.+.-
T Consensus 97 a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~g 140 (434)
T PF05577_consen 97 AYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDG 140 (434)
T ss_dssp HHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SE
T ss_pred HHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEE
Confidence 99999998433 347999999999999999999999996543
No 126
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.38 E-value=0.0081 Score=51.51 Aligned_cols=40 Identities=25% Similarity=0.091 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCCC
Q 019962 185 EEARCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPT 224 (333)
Q Consensus 185 ~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~ 224 (333)
.+....+.-+..+.+..+|.|+|+||||.+|.++|...++
T Consensus 12 ~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~ 51 (153)
T cd00741 12 NLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRG 51 (153)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHh
Confidence 3334444444324477999999999999999999987654
No 127
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=96.37 E-value=0.043 Score=52.84 Aligned_cols=72 Identities=19% Similarity=0.237 Sum_probs=47.8
Q ss_pred hhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHHhcCC---CeeeEeeechhHH
Q 019962 137 RLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEWEAGF---GKMGVCGLSMGGV 213 (333)
Q Consensus 137 ~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~~~g~---~~vgv~G~SMGG~ 213 (333)
.+...++++||.|+..|..+.|. |=. +=...|.+.+.-+|+..+... ..|. .++++.|.|=||+
T Consensus 17 ~~l~~~L~~GyaVv~pDY~Glg~--~y~----------~~~~~a~avLD~vRAA~~~~~-~~gl~~~~~v~l~GySqGG~ 83 (290)
T PF03583_consen 17 PFLAAWLARGYAVVAPDYEGLGT--PYL----------NGRSEAYAVLDAVRAARNLPP-KLGLSPSSRVALWGYSQGGQ 83 (290)
T ss_pred HHHHHHHHCCCEEEecCCCCCCC--ccc----------CcHhHHHHHHHHHHHHHhccc-ccCCCCCCCEEEEeeCccHH
Confidence 46788999999999988877776 110 111333344444566666654 3453 6899999999997
Q ss_pred HHHHhhhc
Q 019962 214 HAAMVGSL 221 (333)
Q Consensus 214 ~Asl~A~~ 221 (333)
=|..+|..
T Consensus 84 Aa~~AA~l 91 (290)
T PF03583_consen 84 AALWAAEL 91 (290)
T ss_pred HHHHHHHH
Confidence 76555543
No 128
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=96.34 E-value=0.02 Score=51.15 Aligned_cols=81 Identities=15% Similarity=0.105 Sum_probs=53.1
Q ss_pred CeeeEeeechhHHHHHHhh-hcCCCceeeecccCCCCcc-ccccccccccCccHHHHHHHHHhhhhcCCHHHHHHHHHHh
Q 019962 201 GKMGVCGLSMGGVHAAMVG-SLHPTPVATLPFLSPHSAV-VAFCEGILKHGTAWEALREELAAKKVAMTLEEVRERMRNV 278 (333)
Q Consensus 201 ~~vgv~G~SMGG~~Asl~A-~~~P~~v~~vp~~~~~ta~-~vfteGvl~~~~~w~~L~~~l~~~~~~lt~~~a~~rl~~~ 278 (333)
+++.++|+|+|...+...+ ...++.++.+.++||-... ....... .
T Consensus 55 ~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~~~~~--------------------------------~ 102 (171)
T PF06821_consen 55 EPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPEPFPPE--------------------------------L 102 (171)
T ss_dssp TTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCHHCCTCG--------------------------------G
T ss_pred CCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcccccchhhh--------------------------------c
Confidence 6699999999999999988 6778899999998876542 1100000 0
Q ss_pred hccCCCCCCCCCCC--CCeEEEEEecCCccccchhhHHhhhc
Q 019962 279 LSLTDVTRFPIPKI--PNAVIFVAATVSTVFDYHHEEVLKMD 318 (333)
Q Consensus 279 l~~t~l~nf~~p~d--p~~ilvV~g~~D~yVP~~~~~~L~~~ 318 (333)
..++.+ |.+ +-..++|.++||-|+|.+.+++|.++
T Consensus 103 ~~f~~~-----p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~ 139 (171)
T PF06821_consen 103 DGFTPL-----PRDPLPFPSIVIASDNDPYVPFERAQRLAQR 139 (171)
T ss_dssp CCCTTS-----HCCHHHCCEEEEEETTBSSS-HHHHHHHHHH
T ss_pred cccccC-----cccccCCCeEEEEcCCCCccCHHHHHHHHHH
Confidence 011111 111 11248899999999999999988765
No 129
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=96.29 E-value=0.093 Score=50.40 Aligned_cols=97 Identities=15% Similarity=0.179 Sum_probs=51.1
Q ss_pred cCCCCCC-CceEEEEecCCCChhHHHhhhhchHHHhcCccEEEeecccC-CCCCCCcccCcccchhhhHHHhhhhhHHHH
Q 019962 110 PKCVPPQ-KMACVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFY-GQRRPLLQRGAKLLCVSDLLLLGRATIEEA 187 (333)
Q Consensus 110 p~~~~~~-~~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~-G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~ 187 (333)
|+.-.++ .+.+ +--+|+|..-.. ...+|.-|...|+.|++++.-.| |.+.-. . +-|.| .....+.
T Consensus 22 P~~~~~~~~~ti-liA~Gf~rrmdh-~agLA~YL~~NGFhViRyDsl~HvGlSsG~---------I-~eftm-s~g~~sL 88 (294)
T PF02273_consen 22 PKNNEPKRNNTI-LIAPGFARRMDH-FAGLAEYLSANGFHVIRYDSLNHVGLSSGD---------I-NEFTM-SIGKASL 88 (294)
T ss_dssp --TTS---S-EE-EEE-TT-GGGGG-GHHHHHHHHTTT--EEEE---B-----------------------H-HHHHHHH
T ss_pred CCCCCcccCCeE-EEecchhHHHHH-HHHHHHHHhhCCeEEEeccccccccCCCCC---------h-hhcch-HHhHHHH
Confidence 5544333 3543 444565521111 01588889999999999998877 444111 1 11122 1345566
Q ss_pred HHHHHHHHHhcCCCeeeEeeechhHHHHHHhhh
Q 019962 188 RCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGS 220 (333)
Q Consensus 188 r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~ 220 (333)
...++|++ +.|..++|++-.|+-|++|-.+|+
T Consensus 89 ~~V~dwl~-~~g~~~~GLIAaSLSaRIAy~Va~ 120 (294)
T PF02273_consen 89 LTVIDWLA-TRGIRRIGLIAASLSARIAYEVAA 120 (294)
T ss_dssp HHHHHHHH-HTT---EEEEEETTHHHHHHHHTT
T ss_pred HHHHHHHH-hcCCCcchhhhhhhhHHHHHHHhh
Confidence 88999999 899999999999999999999999
No 130
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=96.24 E-value=0.0063 Score=55.85 Aligned_cols=97 Identities=20% Similarity=0.247 Sum_probs=64.7
Q ss_pred EEecCCCChhHHHhh-hhchHHHhcCccEEEeecccCCC-CCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHHhcC
Q 019962 122 VHLAGTGDHTFERRL-RLGGPLLKENIATMVLESPFYGQ-RRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEWEAG 199 (333)
Q Consensus 122 iH~aG~Gd~~~~~r~-~la~pL~~~Gi~~ill~~Py~G~-RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~~~g 199 (333)
|..+| |.||...- .+|+.|.++|+.|+-++.+-|.- +|-|.|. -.+...+++...++-+
T Consensus 6 v~~SG--DgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~rtP~~~-----------------a~Dl~~~i~~y~~~w~ 66 (192)
T PF06057_consen 6 VFFSG--DGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSERTPEQT-----------------AADLARIIRHYRARWG 66 (192)
T ss_pred EEEeC--CCCchhhhHHHHHHHHHCCCeEEEechHHHHhhhCCHHHH-----------------HHHHHHHHHHHHHHhC
Confidence 44444 44775433 69999999999999999995533 3444331 2233444444443779
Q ss_pred CCeeeEeeechhHHHHHHhhhcCC----CceeeecccCCCCc
Q 019962 200 FGKMGVCGLSMGGVHAAMVGSLHP----TPVATLPFLSPHSA 237 (333)
Q Consensus 200 ~~~vgv~G~SMGG~~Asl~A~~~P----~~v~~vp~~~~~ta 237 (333)
..++.|+|.|+|.=+.-.+.-.-| ..|..+.|++++..
T Consensus 67 ~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 67 RKRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPSTT 108 (192)
T ss_pred CceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCCc
Confidence 999999999999966555544444 47788888887543
No 131
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.05 E-value=0.0094 Score=49.68 Aligned_cols=33 Identities=21% Similarity=0.235 Sum_probs=25.7
Q ss_pred HHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhc
Q 019962 188 RCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSL 221 (333)
Q Consensus 188 r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~ 221 (333)
..+..+++ +.+..+|.+||+||||.+|.++|..
T Consensus 52 ~~l~~~~~-~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 52 DALKELVE-KYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHH-HSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHh-cccCccchhhccchHHHHHHHHHHh
Confidence 34445554 5556899999999999999999874
No 132
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=95.90 E-value=0.22 Score=47.28 Aligned_cols=105 Identities=18% Similarity=0.150 Sum_probs=57.3
Q ss_pred EEEEecCCC--ChhHHHhhhhchHHH---hcCccEEEeecccCCCCCCCcc--cCcccchhhhHHHhhhhhHHHHHHHHH
Q 019962 120 CVVHLAGTG--DHTFERRLRLGGPLL---KENIATMVLESPFYGQRRPLLQ--RGAKLLCVSDLLLLGRATIEEARCLLH 192 (333)
Q Consensus 120 ~viH~aG~G--d~~~~~r~~la~pL~---~~Gi~~ill~~Py~G~RkP~~q--~~s~l~~vsd~~~~g~~~i~E~r~ll~ 192 (333)
+++..+|=- -..|.. +...|. ...+.++.....+|........ ......+..|- |.=...+++
T Consensus 4 li~~IPGNPGlv~fY~~---Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~Q-------I~hk~~~i~ 73 (266)
T PF10230_consen 4 LIVFIPGNPGLVEFYEE---FLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQ-------IEHKIDFIK 73 (266)
T ss_pred EEEEECCCCChHHHHHH---HHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHH-------HHHHHHHHH
Confidence 345555533 223433 344444 3478888888888765533311 01112222211 111223333
Q ss_pred HHHHhc--CCCeeeEeeechhHHHHHHhhhcCC---CceeeecccCC
Q 019962 193 WLEWEA--GFGKMGVCGLSMGGVHAAMVGSLHP---TPVATLPFLSP 234 (333)
Q Consensus 193 wl~~~~--g~~~vgv~G~SMGG~~Asl~A~~~P---~~v~~vp~~~~ 234 (333)
...... ...++.+.|+|+|++|+..+.-..| ..|..+.++-|
T Consensus 74 ~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfP 120 (266)
T PF10230_consen 74 ELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFP 120 (266)
T ss_pred HHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCC
Confidence 333122 6799999999999999999999888 44444444433
No 133
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=95.90 E-value=0.055 Score=54.18 Aligned_cols=101 Identities=23% Similarity=0.191 Sum_probs=63.7
Q ss_pred hHHHhh-hhchHHHhcCccEEEeecccC--CCCCCCcccCcccchhhhHHHhhhhhHHHH-HHHHHHHHHhcCCCeee-E
Q 019962 131 TFERRL-RLGGPLLKENIATMVLESPFY--GQRRPLLQRGAKLLCVSDLLLLGRATIEEA-RCLLHWLEWEAGFGKMG-V 205 (333)
Q Consensus 131 ~~~~r~-~la~pL~~~Gi~~ill~~Py~--G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~-r~ll~wl~~~~g~~~vg-v 205 (333)
+||... .=.+|+--+-|-+|-.+..+. |+..|..-...+-.+-+++-. .+|.|. ++-..-++ ++|+.++. |
T Consensus 76 GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~---~ti~D~V~aq~~ll~-~LGI~~l~av 151 (368)
T COG2021 76 GWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPV---ITIRDMVRAQRLLLD-ALGIKKLAAV 151 (368)
T ss_pred ccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCc---ccHHHHHHHHHHHHH-hcCcceEeee
Confidence 488733 124455557799999988887 444444322221111111111 133332 22233344 88999997 9
Q ss_pred eeechhHHHHHHhhhcCCCceeeecccCCC
Q 019962 206 CGLSMGGVHAAMVGSLHPTPVATLPFLSPH 235 (333)
Q Consensus 206 ~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ 235 (333)
+|-||||-.|..-|..+|+.+..+..++.+
T Consensus 152 vGgSmGGMqaleWa~~yPd~V~~~i~ia~~ 181 (368)
T COG2021 152 VGGSMGGMQALEWAIRYPDRVRRAIPIATA 181 (368)
T ss_pred eccChHHHHHHHHHHhChHHHhhhheeccc
Confidence 999999999999999999998888777753
No 134
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.86 E-value=0.021 Score=54.55 Aligned_cols=97 Identities=21% Similarity=0.175 Sum_probs=61.6
Q ss_pred CceEEEEecCCCChhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHH
Q 019962 117 KMACVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEW 196 (333)
Q Consensus 117 ~~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~ 196 (333)
+|+.|+|.+|.....|. -|+..|... +.++-+..|.++...+.. .+....+ ...++-+++
T Consensus 1 ~pLF~fhp~~G~~~~~~---~L~~~l~~~-~~v~~l~a~g~~~~~~~~--~~l~~~a--------------~~yv~~Ir~ 60 (257)
T COG3319 1 PPLFCFHPAGGSVLAYA---PLAAALGPL-LPVYGLQAPGYGAGEQPF--ASLDDMA--------------AAYVAAIRR 60 (257)
T ss_pred CCEEEEcCCCCcHHHHH---HHHHHhccC-ceeeccccCccccccccc--CCHHHHH--------------HHHHHHHHH
Confidence 46667895554444443 244444444 677777788887542221 1222222 556666665
Q ss_pred hcCCCeeeEeeechhHHHHHHhhhc---CCCceeeecccC
Q 019962 197 EAGFGKMGVCGLSMGGVHAAMVGSL---HPTPVATLPFLS 233 (333)
Q Consensus 197 ~~g~~~vgv~G~SMGG~~Asl~A~~---~P~~v~~vp~~~ 233 (333)
.++.++..++|.|+||.+|--+|.. .-+.|+.+.++-
T Consensus 61 ~QP~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD 100 (257)
T COG3319 61 VQPEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLD 100 (257)
T ss_pred hCCCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEec
Confidence 7899999999999999999999874 345566665554
No 135
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.84 E-value=0.022 Score=57.33 Aligned_cols=95 Identities=22% Similarity=0.217 Sum_probs=73.3
Q ss_pred CCceEEEEecCCCChhHHHhhh---hchH---HHh--cCccEEEeecccCCCC-CCCcccCcccchhhhHHHhhhhhHHH
Q 019962 116 QKMACVVHLAGTGDHTFERRLR---LGGP---LLK--ENIATMVLESPFYGQR-RPLLQRGAKLLCVSDLLLLGRATIEE 186 (333)
Q Consensus 116 ~~~v~viH~aG~Gd~~~~~r~~---la~p---L~~--~Gi~~ill~~Py~G~R-kP~~q~~s~l~~vsd~~~~g~~~i~E 186 (333)
.+|++++| |+..+-|..... |..| =.+ --+.||.+..|+||=+ +|..+ |...++-
T Consensus 152 v~PlLl~H--GwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~--------------GFn~~a~ 215 (469)
T KOG2565|consen 152 VKPLLLLH--GWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKT--------------GFNAAAT 215 (469)
T ss_pred ccceEEec--CCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccC--------------CccHHHH
Confidence 47877777 999888777542 3444 111 2478999999999988 55544 2334556
Q ss_pred HHHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCCCcee
Q 019962 187 ARCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVA 227 (333)
Q Consensus 187 ~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~ 227 (333)
||.+-.-+. ++|+.+..|-|--.|..+++++|+.+|+.|.
T Consensus 216 ArvmrkLMl-RLg~nkffiqGgDwGSiI~snlasLyPenV~ 255 (469)
T KOG2565|consen 216 ARVMRKLML-RLGYNKFFIQGGDWGSIIGSNLASLYPENVL 255 (469)
T ss_pred HHHHHHHHH-HhCcceeEeecCchHHHHHHHHHhhcchhhh
Confidence 688888888 9999999999999999999999999999664
No 136
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=95.81 E-value=0.034 Score=58.50 Aligned_cols=128 Identities=17% Similarity=0.149 Sum_probs=81.5
Q ss_pred eEEEeecCCCCCCCceEEEEec-CC-C--ChhHHHhhhhchH----HHhcCccEEEeecccCCCCCCCcccCcccchhhh
Q 019962 104 RVAFLAPKCVPPQKMACVVHLA-GT-G--DHTFERRLRLGGP----LLKENIATMVLESPFYGQRRPLLQRGAKLLCVSD 175 (333)
Q Consensus 104 ~~~~~~p~~~~~~~~v~viH~a-G~-G--d~~~~~r~~la~p----L~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd 175 (333)
...+++|.+- ...||+ ++.. .+ + +-.+.+. ..+.| ++.+||+|+..+.=+-|.++-...
T Consensus 33 ~~dIy~Pa~~-g~~Pvl-l~~~~~Py~k~~~~~~~~-~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~---------- 99 (563)
T COG2936 33 AADIYRPAGA-GPLPVL-LSRTRLPYRKRNGTFGPQ-LSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFD---------- 99 (563)
T ss_pred EEEEEccCCC-CCCcee-EEeeccccccccccCcch-hhcccccceeecCceEEEEecccccccCCcccc----------
Confidence 4567788764 445654 3433 11 1 1112221 23444 778999999988755444432221
Q ss_pred HHHhhhhhHHHHHHHHHHHHHhcC--CCeeeEeeechhHHHHHHhhhcC-CCceeeecccCCCCc--cccccccccc
Q 019962 176 LLLLGRATIEEARCLLHWLEWEAG--FGKMGVCGLSMGGVHAAMVGSLH-PTPVATLPFLSPHSA--VVAFCEGILK 247 (333)
Q Consensus 176 ~~~~g~~~i~E~r~ll~wl~~~~g--~~~vgv~G~SMGG~~Asl~A~~~-P~~v~~vp~~~~~ta--~~vfteGvl~ 247 (333)
.+.. .++.|.--+++|+. ++. .++||+.|+|-+|++..++|++. |...+++|+++.... ...|..|+..
T Consensus 100 ~~~~--~E~~Dg~D~I~Wia-~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~y~d~~~~~G~~~ 173 (563)
T COG2936 100 PESS--REAEDGYDTIEWLA-KQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDRYRDDAFYGGGAE 173 (563)
T ss_pred eecc--ccccchhHHHHHHH-hCCccCCeeeeecccHHHHHHHHHHhcCCchheeeccccccccccccccccCcchh
Confidence 1111 36677789999998 565 49999999999999999998875 557777888776443 5666666543
No 137
>KOG3101 consensus Esterase D [General function prediction only]
Probab=95.77 E-value=0.019 Score=54.03 Aligned_cols=131 Identities=17% Similarity=0.187 Sum_probs=66.7
Q ss_pred eeEEEeecCCCCC-CCceEEEEecCCC--ChhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccC-----ccc-chh
Q 019962 103 ARVAFLAPKCVPP-QKMACVVHLAGTG--DHTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRG-----AKL-LCV 173 (333)
Q Consensus 103 a~~~~~~p~~~~~-~~~v~viH~aG~G--d~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~-----s~l-~~v 173 (333)
..|.+++|.+-+. +|-+++--++|.- +..|..-..+-..-.+.|+.++.++--=-|- .-.++.. .+. +++
T Consensus 28 Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~-~v~g~~eswDFG~GAGFYv 106 (283)
T KOG3101|consen 28 MTFGVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGV-EVAGDDESWDFGQGAGFYV 106 (283)
T ss_pred eEEEEecCCCcccCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCcc-ccCCCcccccccCCceeEE
Confidence 4678888877653 3333457788866 3345442233334446899988765321111 1111110 000 000
Q ss_pred -------hhHHHhhhhhHHHHHHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCC
Q 019962 174 -------SDLLLLGRATIEEARCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSP 234 (333)
Q Consensus 174 -------sd~~~~g~~~i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~ 234 (333)
.-..-|..=.+.|.-.+++-........+++|.|+|||||-|.-.+...|..-..+-..+|
T Consensus 107 nAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAP 174 (283)
T KOG3101|consen 107 NATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAP 174 (283)
T ss_pred ecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceecccc
Confidence 0011111112333333332111123347899999999999999999888875555544443
No 138
>COG4099 Predicted peptidase [General function prediction only]
Probab=95.68 E-value=0.024 Score=55.69 Aligned_cols=34 Identities=24% Similarity=0.240 Sum_probs=28.6
Q ss_pred CCeeeEeeechhHHHHHHhhhcCCCceeeecccC
Q 019962 200 FGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLS 233 (333)
Q Consensus 200 ~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~ 233 (333)
-.||.++|.||||.++-.++-.+|+.-+....++
T Consensus 268 ~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~ia 301 (387)
T COG4099 268 RSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIA 301 (387)
T ss_pred cceEEEEeecCcchhhHHHHHhCchhhheeeeec
Confidence 4899999999999999999999998655554444
No 139
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=95.67 E-value=0.028 Score=55.91 Aligned_cols=69 Identities=17% Similarity=0.153 Sum_probs=51.4
Q ss_pred HHHh-cCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHH-hcCC--CeeeEeeechhHHHHH
Q 019962 141 PLLK-ENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEW-EAGF--GKMGVCGLSMGGVHAA 216 (333)
Q Consensus 141 pL~~-~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~-~~g~--~~vgv~G~SMGG~~As 216 (333)
.+++ .|.+|+.+..|+.|.++-.-. .. ..+.+..++++||++ ..|. ..|.+-|.|+||.+++
T Consensus 165 ~~ak~~~aNvl~fNYpGVg~S~G~~s-------~~-------dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa 230 (365)
T PF05677_consen 165 RFAKELGANVLVFNYPGVGSSTGPPS-------RK-------DLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQA 230 (365)
T ss_pred HHHHHcCCcEEEECCCccccCCCCCC-------HH-------HHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHH
Confidence 4454 699999999999999944422 11 234455889999974 3454 8999999999999999
Q ss_pred HhhhcCC
Q 019962 217 MVGSLHP 223 (333)
Q Consensus 217 l~A~~~P 223 (333)
.+...+.
T Consensus 231 ~AL~~~~ 237 (365)
T PF05677_consen 231 EALKKEV 237 (365)
T ss_pred HHHHhcc
Confidence 9776654
No 140
>PRK04940 hypothetical protein; Provisional
Probab=95.65 E-value=0.078 Score=48.28 Aligned_cols=85 Identities=16% Similarity=0.240 Sum_probs=51.1
Q ss_pred CeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCccccccccccccCccHHHHHHHHHhhhhcCCHHHHHHHHHHhhc
Q 019962 201 GKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAVVAFCEGILKHGTAWEALREELAAKKVAMTLEEVRERMRNVLS 280 (333)
Q Consensus 201 ~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta~~vfteGvl~~~~~w~~L~~~l~~~~~~lt~~~a~~rl~~~l~ 280 (333)
++++|+|-||||+-|.-+|..+.- -+++.+ +++. +|+.|++.+..+.. -+ .++
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~-~aVLiN-------PAv~--------P~~~L~~~ig~~~~-y~----------~~~ 112 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGI-RQVIFN-------PNLF--------PEENMEGKIDRPEE-YA----------DIA 112 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCC-CEEEEC-------CCCC--------hHHHHHHHhCCCcc-hh----------hhh
Confidence 689999999999999999998873 233332 2221 14555543311111 00 111
Q ss_pred cCCCCCCCCCCCCCeEEEEEecCCccccchhhH
Q 019962 281 LTDVTRFPIPKIPNAVIFVAATVSTVFDYHHEE 313 (333)
Q Consensus 281 ~t~l~nf~~p~dp~~ilvV~g~~D~yVP~~~~~ 313 (333)
..|+..+. ..+|++++++.+++|+......+.
T Consensus 113 ~~h~~eL~-~~~p~r~~vllq~gDEvLDyr~a~ 144 (180)
T PRK04940 113 TKCVTNFR-EKNRDRCLVILSRNDEVLDSQRTA 144 (180)
T ss_pred HHHHHHhh-hcCcccEEEEEeCCCcccCHHHHH
Confidence 11111111 466889999999999999965554
No 141
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=95.62 E-value=0.025 Score=55.30 Aligned_cols=100 Identities=21% Similarity=0.247 Sum_probs=56.6
Q ss_pred EEEEecCCCChh----HHHhhhhchHHHhcCccEEEeecc--cCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHH
Q 019962 120 CVVHLAGTGDHT----FERRLRLGGPLLKENIATMVLESP--FYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHW 193 (333)
Q Consensus 120 ~viH~aG~Gd~~----~~~r~~la~pL~~~Gi~~ill~~P--y~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~w 193 (333)
|+|.+.|-||.- |-. .||..|-..||.++-+.+- |-|-. ..| + -.-+.|+..++.|
T Consensus 35 ~llfIGGLtDGl~tvpY~~--~La~aL~~~~wsl~q~~LsSSy~G~G-----~~S-L----------~~D~~eI~~~v~y 96 (303)
T PF08538_consen 35 ALLFIGGLTDGLLTVPYLP--DLAEALEETGWSLFQVQLSSSYSGWG-----TSS-L----------DRDVEEIAQLVEY 96 (303)
T ss_dssp EEEEE--TT--TT-STCHH--HHHHHHT-TT-EEEEE--GGGBTTS------S---H----------HHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCCchHH--HHHHHhccCCeEEEEEEecCccCCcC-----cch-h----------hhHHHHHHHHHHH
Confidence 457777888653 443 6899997789999886552 22211 001 1 1237889999999
Q ss_pred HHHhc----CCCeeeEeeechhHHHHHHhhhcC-----CCceeeecccCCCCc
Q 019962 194 LEWEA----GFGKMGVCGLSMGGVHAAMVGSLH-----PTPVATLPFLSPHSA 237 (333)
Q Consensus 194 l~~~~----g~~~vgv~G~SMGG~~Asl~A~~~-----P~~v~~vp~~~~~ta 237 (333)
|++.. +.++|.|.|+|=|---........ ..+|.-+++-||+|-
T Consensus 97 lr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSD 149 (303)
T PF08538_consen 97 LRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSD 149 (303)
T ss_dssp HHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---
T ss_pred HHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCC
Confidence 99431 579999999999987766654432 246667777777664
No 142
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.58 E-value=0.024 Score=51.86 Aligned_cols=26 Identities=27% Similarity=0.197 Sum_probs=22.6
Q ss_pred hcCCCeeeEeeechhHHHHHHhhhcC
Q 019962 197 EAGFGKMGVCGLSMGGVHAAMVGSLH 222 (333)
Q Consensus 197 ~~g~~~vgv~G~SMGG~~Asl~A~~~ 222 (333)
+.+..+|.+||+||||.+|+++|...
T Consensus 124 ~~p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 124 QYPDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred hCCCceEEEEccCHHHHHHHHHHHHH
Confidence 45668999999999999999998853
No 143
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=95.51 E-value=0.15 Score=46.53 Aligned_cols=85 Identities=19% Similarity=0.249 Sum_probs=56.1
Q ss_pred CCeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCccccccccccccCccHHHHHHHHHhhhhcCCHHHHHHHHHHhh
Q 019962 200 FGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAVVAFCEGILKHGTAWEALREELAAKKVAMTLEEVRERMRNVL 279 (333)
Q Consensus 200 ~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta~~vfteGvl~~~~~w~~L~~~l~~~~~~lt~~~a~~rl~~~l 279 (333)
-+++.++++|+|+.+++..+..-..+|+-+-++||...+.. . .+-...+
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~---~----------------------------~~~~~~~ 106 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRP---E----------------------------IRPKHLM 106 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCcccc---c----------------------------cchhhcc
Confidence 46699999999999999998876666655555554332111 0 0011222
Q ss_pred ccCCCCCCCCCCCCCeEEEEEecCCccccchhhHHhhhc
Q 019962 280 SLTDVTRFPIPKIPNAVIFVAATVSTVFDYHHEEVLKMD 318 (333)
Q Consensus 280 ~~t~l~nf~~p~dp~~ilvV~g~~D~yVP~~~~~~L~~~ 318 (333)
++++. +.-.-|.+.++|..+||.|++.+.++.+.++
T Consensus 107 tf~~~---p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~ 142 (181)
T COG3545 107 TFDPI---PREPLPFPSVVVASRNDPYVSYEHAEDLANA 142 (181)
T ss_pred ccCCC---ccccCCCceeEEEecCCCCCCHHHHHHHHHh
Confidence 44433 2222356789999999999999999988764
No 144
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=95.25 E-value=0.13 Score=49.85 Aligned_cols=95 Identities=17% Similarity=0.181 Sum_probs=62.2
Q ss_pred EeecCCCCCCCceEEEEecCCCChhHHHhh-hhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHH
Q 019962 107 FLAPKCVPPQKMACVVHLAGTGDHTFERRL-RLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIE 185 (333)
Q Consensus 107 ~~~p~~~~~~~~v~viH~aG~Gd~~~~~r~-~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~ 185 (333)
++.|.. .+.-|++ +.++|+.-.. +++ ++-..++-.|+-++.+++= ..-.|. |...|.
T Consensus 37 I~tP~~-~G~yPVi-lF~HG~~l~n--s~Ys~lL~HIASHGfIVVAPQl~--~~~~p~----------------~~~Ei~ 94 (307)
T PF07224_consen 37 IVTPSE-AGTYPVI-LFLHGFNLYN--SFYSQLLAHIASHGFIVVAPQLY--TLFPPD----------------GQDEIK 94 (307)
T ss_pred EecCCc-CCCccEE-EEeechhhhh--HHHHHHHHHHhhcCeEEEechhh--cccCCC----------------chHHHH
Confidence 456655 3556765 5556776321 111 4666777789999987652 111122 335667
Q ss_pred HHHHHHHHHHHhc----------CCCeeeEeeechhHHHHHHhhhcCC
Q 019962 186 EARCLLHWLEWEA----------GFGKMGVCGLSMGGVHAAMVGSLHP 223 (333)
Q Consensus 186 E~r~ll~wl~~~~----------g~~~vgv~G~SMGG~~Asl~A~~~P 223 (333)
.+...++||.+.+ ...++++.|+|.||.+|-.+|..+.
T Consensus 95 ~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a 142 (307)
T PF07224_consen 95 SAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYA 142 (307)
T ss_pred HHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhccc
Confidence 7789999996321 2388999999999999999998664
No 145
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=95.25 E-value=0.038 Score=55.44 Aligned_cols=239 Identities=12% Similarity=0.121 Sum_probs=127.3
Q ss_pred eeccCeEEEeeeeeCCCcccccCCCCccccceeEEEeecCCCC-CCCceEEEEecC----CCCh-hHHHhhhhchHHHh-
Q 019962 72 WETQTAVLREGVFRTPCDEQLMSALPPESHNARVAFLAPKCVP-PQKMACVVHLAG----TGDH-TFERRLRLGGPLLK- 144 (333)
Q Consensus 72 ~~~~~~~~~~g~F~Sp~~~~~p~~lp~~s~~a~~~~~~p~~~~-~~~~v~viH~aG----~Gd~-~~~~r~~la~pL~~- 144 (333)
.+...++++...|.|= .-.++-.....=.-...+++|+.-. ++...++|-+.. .+.. .... .+...++.
T Consensus 21 ~~~~~~t~y~l~mtSQ--~W~~~~v~~~~W~H~l~I~vP~~~~~~~~all~i~gG~~~~~~~~~~~~~~--~~~~~~A~~ 96 (367)
T PF10142_consen 21 YTTPGVTVYVLNMTSQ--QWLPESVDRPVWWHWLTIYVPKNDKNPDTALLFITGGSNRNWPGPPPDFDD--ELLQMIARA 96 (367)
T ss_pred EecCCEEEEEEEEEee--ecCCCCCCcccCEEEEEEEECCCCCCCceEEEEEECCcccCCCCCCCcchH--HHHHHHHHh
Confidence 3456789999999875 1111111111112234566798833 334444455332 0100 1111 34556665
Q ss_pred cC-ccEEEeecc-----cCCCCC---CCcccC--------cccchhhhHHHhhhhhHHHHHHHHHHHHHhc---CCCeee
Q 019962 145 EN-IATMVLESP-----FYGQRR---PLLQRG--------AKLLCVSDLLLLGRATIEEARCLLHWLEWEA---GFGKMG 204 (333)
Q Consensus 145 ~G-i~~ill~~P-----y~G~Rk---P~~q~~--------s~l~~vsd~~~~g~~~i~E~r~ll~wl~~~~---g~~~vg 204 (333)
-| +-+++...| |-+..+ .++... .......-++=|..+.+.-...+-++++ +. .+++.+
T Consensus 97 t~siv~~l~qvPNQpl~f~~d~~~r~ED~iIAytW~~fl~~~d~~w~l~~PMtka~vrAMD~vq~~~~-~~~~~~i~~Fv 175 (367)
T PF10142_consen 97 TGSIVAILYQVPNQPLTFDNDPKPRTEDAIIAYTWRKFLETGDPEWPLHLPMTKAAVRAMDAVQEFLK-KKFGVNIEKFV 175 (367)
T ss_pred cCCEEEEeCcCCCCCeEeCCCCccccHHHHHHHHHHHHhccCCccchhhhhHHHHHHHHHHHHHHHHH-hhcCCCccEEE
Confidence 34 444454444 233222 221110 0111222233455555555566667776 44 579999
Q ss_pred EeeechhHHHHHHhhhcCCCceeeecccCCC-CccccccccccccCccHHHHHHHHHhhhhcCCHHHHHHHHHHhhccCC
Q 019962 205 VCGLSMGGVHAAMVGSLHPTPVATLPFLSPH-SAVVAFCEGILKHGTAWEALREELAAKKVAMTLEEVRERMRNVLSLTD 283 (333)
Q Consensus 205 v~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~-ta~~vfteGvl~~~~~w~~L~~~l~~~~~~lt~~~a~~rl~~~l~~t~ 283 (333)
|+|-|=-|+++-++|+.+||.++.+|++-.. .....+..-..++..+|.---+++ -...+++...-..+..+++.-+
T Consensus 176 V~GaSKRGWTtWltaa~D~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY--~~~gi~~~l~tp~f~~L~~ivD 253 (367)
T PF10142_consen 176 VTGASKRGWTTWLTAAVDPRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSFAFQDY--YNEGITQQLDTPEFDKLMQIVD 253 (367)
T ss_pred EeCCchHhHHHHHhhccCcceeEEeeEEEccCCcHHHHHHHHHHhCCCCccchhhh--hHhCchhhcCCHHHHHHHHhcC
Confidence 9999999999999999999999999986422 111111111111222332211111 1112344444455677777777
Q ss_pred CCCCCCCCCCCeEEEEEecCCccccchhhHHhhhc
Q 019962 284 VTRFPIPKIPNAVIFVAATVSTVFDYHHEEVLKMD 318 (333)
Q Consensus 284 l~nf~~p~dp~~ilvV~g~~D~yVP~~~~~~L~~~ 318 (333)
+.+|..-.. -+-++|.|.+|+|-.+|++.....+
T Consensus 254 P~~Y~~rL~-~PK~ii~atgDeFf~pD~~~~y~d~ 287 (367)
T PF10142_consen 254 PYSYRDRLT-MPKYIINATGDEFFVPDSSNFYYDK 287 (367)
T ss_pred HHHHHHhcC-ccEEEEecCCCceeccCchHHHHhh
Confidence 777764443 2367799999999999988765544
No 146
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=95.15 E-value=0.093 Score=52.62 Aligned_cols=118 Identities=16% Similarity=0.078 Sum_probs=61.0
Q ss_pred CceEEEEecCCCChhHHHhhhhchHHHhcCccEEEeecccCCC------CCCCcccC---------------cccchhhh
Q 019962 117 KMACVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQ------RRPLLQRG---------------AKLLCVSD 175 (333)
Q Consensus 117 ~~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~------RkP~~q~~---------------s~l~~vsd 175 (333)
.|| ||.-||.|.+-... ..++..|+.+||=|+.+|=++... +.+..... +.... .+
T Consensus 100 ~Pv-vIFSHGlgg~R~~y-S~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 176 (379)
T PF03403_consen 100 FPV-VIFSHGLGGSRTSY-SAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDP-EE 176 (379)
T ss_dssp EEE-EEEE--TT--TTTT-HHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----G-GG
T ss_pred CCE-EEEeCCCCcchhhH-HHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccc-hh
Confidence 454 58878888553221 258999999999999999987621 11110000 00000 11
Q ss_pred HH----HhhhhhHHHHHHHHHHHHH----------------------hcCCCeeeEeeechhHHHHHHhhhcCCCceeee
Q 019962 176 LL----LLGRATIEEARCLLHWLEW----------------------EAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATL 229 (333)
Q Consensus 176 ~~----~~g~~~i~E~r~ll~wl~~----------------------~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~v 229 (333)
.+ .+-..-..|+..+++.|+. +....+|+++|+|+||.+|..++..+++..+.|
T Consensus 177 ~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~r~~~~I 256 (379)
T PF03403_consen 177 EFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDTRFKAGI 256 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-TT--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhccCcceEE
Confidence 11 1111235667777766652 112478999999999999999999998766666
Q ss_pred cccCCCCc
Q 019962 230 PFLSPHSA 237 (333)
Q Consensus 230 p~~~~~ta 237 (333)
.+=+|..+
T Consensus 257 ~LD~W~~P 264 (379)
T PF03403_consen 257 LLDPWMFP 264 (379)
T ss_dssp EES---TT
T ss_pred EeCCcccC
Confidence 55445543
No 147
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=95.15 E-value=0.09 Score=48.32 Aligned_cols=43 Identities=23% Similarity=0.233 Sum_probs=28.3
Q ss_pred HHHhhhhhHHHHHHHHHHHHHhcCCCeeeEeeechhHHHHHHhhh
Q 019962 176 LLLLGRATIEEARCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGS 220 (333)
Q Consensus 176 ~~~~g~~~i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~ 220 (333)
+-.+|...+.|....+.-.+ ....+|.++|+||||.++-.+..
T Consensus 55 I~~~g~rL~~eI~~~~~~~~--~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 55 IDVCGERLAEEILEHIKDYE--SKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred hHHHHHHHHHHHHHhccccc--cccccceEEEecccHHHHHHHHH
Confidence 33455555666555554443 23579999999999999876543
No 148
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=94.94 E-value=0.06 Score=50.60 Aligned_cols=153 Identities=18% Similarity=0.208 Sum_probs=87.2
Q ss_pred CceEEEEecCCCChhHHH---hh---hhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHH
Q 019962 117 KMACVVHLAGTGDHTFER---RL---RLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCL 190 (333)
Q Consensus 117 ~~v~viH~aG~Gd~~~~~---r~---~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~l 190 (333)
|-.++|| | |||. |+ ..+.+..+.||++.....-+- |.+ ... ..++.|.-.-
T Consensus 68 klfIfIH--G----GYW~~g~rk~clsiv~~a~~~gY~vasvgY~l~----~q~------htL-------~qt~~~~~~g 124 (270)
T KOG4627|consen 68 KLFIFIH--G----GYWQEGDRKMCLSIVGPAVRRGYRVASVGYNLC----PQV------HTL-------EQTMTQFTHG 124 (270)
T ss_pred cEEEEEe--c----chhhcCchhcccchhhhhhhcCeEEEEeccCcC----ccc------ccH-------HHHHHHHHHH
Confidence 4446777 3 3774 33 268889999999988643222 221 111 1456777777
Q ss_pred HHHHHHh-cCCCeeeEeeechhHHHHHHhhhc--CCCceeeecccCCCCccccccccccccCccHHHHHHHHHh---hhh
Q 019962 191 LHWLEWE-AGFGKMGVCGLSMGGVHAAMVGSL--HPTPVATLPFLSPHSAVVAFCEGILKHGTAWEALREELAA---KKV 264 (333)
Q Consensus 191 l~wl~~~-~g~~~vgv~G~SMGG~~Asl~A~~--~P~~v~~vp~~~~~ta~~vfteGvl~~~~~w~~L~~~l~~---~~~ 264 (333)
++|+..- .....+.+.|+|-|.|.|+.+.+. .|++-+.+-+ .|+-. |++.... +.-
T Consensus 125 v~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~-----------~GvY~-------l~EL~~te~g~dl 186 (270)
T KOG4627|consen 125 VNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILL-----------CGVYD-------LRELSNTESGNDL 186 (270)
T ss_pred HHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHH-----------hhHhh-------HHHHhCCcccccc
Confidence 8887642 235779999999999999988764 4654333322 23222 2221111 111
Q ss_pred cCCHHHHHHHHHHhhccCCCCCCCCCCCCCeEEEEEecCCccccchhhHHhhhcccchhhh
Q 019962 265 AMTLEEVRERMRNVLSLTDVTRFPIPKIPNAVIFVAATVSTVFDYHHEEVLKMDSQHFFAL 325 (333)
Q Consensus 265 ~lt~~~a~~rl~~~l~~t~l~nf~~p~dp~~ilvV~g~~D~yVP~~~~~~L~~~~~~~~~~ 325 (333)
.+|.+++.---..+.+.++++- .+++|+|++|. -+|.+|.|||-+-
T Consensus 187 gLt~~~ae~~Scdl~~~~~v~~--------~ilVv~~~~es-------pklieQnrdf~~q 232 (270)
T KOG4627|consen 187 GLTERNAESVSCDLWEYTDVTV--------WILVVAAEHES-------PKLIEQNRDFADQ 232 (270)
T ss_pred CcccchhhhcCccHHHhcCcee--------eeeEeeecccC-------cHHHHhhhhHHHH
Confidence 3444444333222225555521 28999999873 4677788877543
No 149
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=94.69 E-value=0.094 Score=53.17 Aligned_cols=123 Identities=18% Similarity=0.149 Sum_probs=67.1
Q ss_pred cceeEEEeecCCC--CCCCceE-EEEecCCC-ChhHHHhhhhchHHHhcCccEEEeecccCCCC-CCCcccCcccchhhh
Q 019962 101 HNARVAFLAPKCV--PPQKMAC-VVHLAGTG-DHTFERRLRLGGPLLKENIATMVLESPFYGQR-RPLLQRGAKLLCVSD 175 (333)
Q Consensus 101 ~~a~~~~~~p~~~--~~~~~v~-viH~aG~G-d~~~~~r~~la~pL~~~Gi~~ill~~Py~G~R-kP~~q~~s~l~~vsd 175 (333)
..-+.+++.|..- ..+.||+ .|||.|+. .+... .....|++++-.++++...| | -+-+-... .+
T Consensus 77 dcl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~---~~~~~~~~~~~~~~vv~~~y---Rlg~~g~~~~-----~~ 145 (493)
T cd00312 77 DCLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSL---YPGDGLAREGDNVIVVSINY---RLGVLGFLST-----GD 145 (493)
T ss_pred cCCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCC---CChHHHHhcCCCEEEEEecc---cccccccccC-----CC
Confidence 5667788889753 2345653 56644432 11111 12345555421344444443 2 11111000 01
Q ss_pred HHHhhhhhHHHHHHHHHHHHHhc---C--CCeeeEeeechhHHHHHHhhhcC--CCceeeecccCC
Q 019962 176 LLLLGRATIEEARCLLHWLEWEA---G--FGKMGVCGLSMGGVHAAMVGSLH--PTPVATLPFLSP 234 (333)
Q Consensus 176 ~~~~g~~~i~E~r~ll~wl~~~~---g--~~~vgv~G~SMGG~~Asl~A~~~--P~~v~~vp~~~~ 234 (333)
.-..|-..+.|.+..++|+++.- | -.+|.|.|.|-||+++.+++... +.....+.++|+
T Consensus 146 ~~~~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg 211 (493)
T cd00312 146 IELPGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSG 211 (493)
T ss_pred CCCCcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcC
Confidence 11223345788999999998421 3 37999999999999998887652 334555566654
No 150
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=94.56 E-value=0.059 Score=48.75 Aligned_cols=87 Identities=16% Similarity=0.131 Sum_probs=46.3
Q ss_pred hchHHHhcCccEEEeecccCCCCCCCccc-CcccchhhhHHHhhhhhHHHHHHHHHHHHHhcCCCeeeEeeechhHHHHH
Q 019962 138 LGGPLLKENIATMVLESPFYGQRRPLLQR-GAKLLCVSDLLLLGRATIEEARCLLHWLEWEAGFGKMGVCGLSMGGVHAA 216 (333)
Q Consensus 138 la~pL~~~Gi~~ill~~Py~G~RkP~~q~-~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~As 216 (333)
.+..++..++.++..+..+.|.+.-..+. ........+.....-....+.-...++.....-.++....|.++||..+.
T Consensus 68 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 147 (299)
T COG1073 68 YAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAG 147 (299)
T ss_pred HHHHhhhceeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHHHHHhhhcCcceEEEEEeeccchH
Confidence 67788888999888877555444222111 11111121222111111111111222211012238999999999999999
Q ss_pred HhhhcCCC
Q 019962 217 MVGSLHPT 224 (333)
Q Consensus 217 l~A~~~P~ 224 (333)
..+...+.
T Consensus 148 ~~~~~~~~ 155 (299)
T COG1073 148 ALLAWGPT 155 (299)
T ss_pred HHhhcchh
Confidence 99888873
No 151
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=94.50 E-value=0.22 Score=49.51 Aligned_cols=123 Identities=19% Similarity=0.179 Sum_probs=70.1
Q ss_pred ceeEEEeecCCCCC--CCce-EEEEecCCC-ChhHHHhh-hhchHHHh-cCccEEEeecccCCCC-CCCcccCcccchhh
Q 019962 102 NARVAFLAPKCVPP--QKMA-CVVHLAGTG-DHTFERRL-RLGGPLLK-ENIATMVLESPFYGQR-RPLLQRGAKLLCVS 174 (333)
Q Consensus 102 ~a~~~~~~p~~~~~--~~~v-~viH~aG~G-d~~~~~r~-~la~pL~~-~Gi~~ill~~Py~G~R-kP~~q~~s~l~~vs 174 (333)
.-..++++|..-.. ..|+ +.+||.|+- .+..++-. .+...+++ .+--++-++ .| .|.......+
T Consensus 73 ~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVd-----YRLAPEh~~Pa~y---- 143 (336)
T KOG1515|consen 73 NLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVD-----YRLAPEHPFPAAY---- 143 (336)
T ss_pred CeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecC-----cccCCCCCCCccc----
Confidence 34677888877554 3444 355655544 44455433 57777765 466666553 36 6665443333
Q ss_pred hHHHhhhhhHHHHHHHHH------HHHHhcCCCeeeEeeechhHHHHHHhhh-------cCCCceeeecccCCCCccccc
Q 019962 175 DLLLLGRATIEEARCLLH------WLEWEAGFGKMGVCGLSMGGVHAAMVGS-------LHPTPVATLPFLSPHSAVVAF 241 (333)
Q Consensus 175 d~~~~g~~~i~E~r~ll~------wl~~~~g~~~vgv~G~SMGG~~Asl~A~-------~~P~~v~~vp~~~~~ta~~vf 241 (333)
.|+-..+. |+....+..+|+|+|-|-||-+|..+|. ..|+.. ...++-|...+..+
T Consensus 144 ----------~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~-g~ili~P~~~~~~~ 212 (336)
T KOG1515|consen 144 ----------DDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIK-GQILIYPFFQGTDR 212 (336)
T ss_pred ----------hHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceE-EEEEEecccCCCCC
Confidence 22222233 5543345699999999999999988763 234443 44445554444455
Q ss_pred ccc
Q 019962 242 CEG 244 (333)
Q Consensus 242 teG 244 (333)
++.
T Consensus 213 ~~~ 215 (336)
T KOG1515|consen 213 TES 215 (336)
T ss_pred CCH
Confidence 443
No 152
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=93.88 E-value=1.1 Score=43.77 Aligned_cols=115 Identities=17% Similarity=0.096 Sum_probs=69.3
Q ss_pred EEEecCCCChhHHHh--hhhchHHHhcCccEEEeecccCCCC-CCC------------cccCcccc--------hhhhHH
Q 019962 121 VVHLAGTGDHTFERR--LRLGGPLLKENIATMVLESPFYGQR-RPL------------LQRGAKLL--------CVSDLL 177 (333)
Q Consensus 121 viH~aG~Gd~~~~~r--~~la~pL~~~Gi~~ill~~Py~G~R-kP~------------~q~~s~l~--------~vsd~~ 177 (333)
||-++|+|.|.=|.. ..|.+.|.+.||.++.++.|---.. .|. .+..+... ...+..
T Consensus 90 vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 169 (310)
T PF12048_consen 90 VIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEAEAR 169 (310)
T ss_pred EEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHhHHh
Confidence 355558887753332 2577888899999999999982111 000 00000000 000111
Q ss_pred Hhhhh-hHHHHHHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCCCc-eeeecccCCCC
Q 019962 178 LLGRA-TIEEARCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPTP-VATLPFLSPHS 236 (333)
Q Consensus 178 ~~g~~-~i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~-v~~vp~~~~~t 236 (333)
.--.. .+.-..+++++++ +.|..++.|+|...|.+++.-..+..+.+ +..++++++-.
T Consensus 170 ~~~~~~~~ari~Aa~~~~~-~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~ 229 (310)
T PF12048_consen 170 EAYEERLFARIEAAIAFAQ-QQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYW 229 (310)
T ss_pred HHHHHHHHHHHHHHHHHHH-hcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCC
Confidence 11111 2223478899998 88888899999999999999888776643 55666665443
No 153
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=93.82 E-value=0.72 Score=43.51 Aligned_cols=161 Identities=18% Similarity=0.202 Sum_probs=89.7
Q ss_pred CceEEEEecCCCCh--hHHHhh-hhchHHHhcCccEEEeecccC--CC----------C-CCCc--ccCcccchhhhHHH
Q 019962 117 KMACVVHLAGTGDH--TFERRL-RLGGPLLKENIATMVLESPFY--GQ----------R-RPLL--QRGAKLLCVSDLLL 178 (333)
Q Consensus 117 ~~v~viH~aG~Gd~--~~~~r~-~la~pL~~~Gi~~ill~~Py~--G~----------R-kP~~--q~~s~l~~vsd~~~ 178 (333)
..++|+| |+..+ .|.... .+-+.|.+. +.-+.++.|-- -. + .|++ |.+....+..+...
T Consensus 6 ~rvLcLH--GfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 6 LRVLCLH--GFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred ceEEEec--chhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 3445588 88854 465543 366666666 88888998842 11 1 2221 21222333333211
Q ss_pred hhhhhHHH-HHHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCCCc--eeeecccCCCCccccccccccccCccHHHH
Q 019962 179 LGRATIEE-ARCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPTP--VATLPFLSPHSAVVAFCEGILKHGTAWEAL 255 (333)
Q Consensus 179 ~g~~~i~E-~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~--v~~vp~~~~~ta~~vfteGvl~~~~~w~~L 255 (333)
-......| .+.+.++++ ++| +==||.|+|=|..+|++++++-+.. ....| .---.++..|....+ ..
T Consensus 83 ~~~~~~eesl~yl~~~i~-enG-PFDGllGFSQGA~laa~l~~~~~~~~~~~~~P----~~kF~v~~SGf~~~~----~~ 152 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIK-ENG-PFDGLLGFSQGAALAALLAGLGQKGLPYVKQP----PFKFAVFISGFKFPS----KK 152 (230)
T ss_pred ccccChHHHHHHHHHHHH-HhC-CCccccccchhHHHHHHhhcccccCCcccCCC----CeEEEEEEecCCCCc----ch
Confidence 22224555 478888887 544 3338999999999999999943322 11111 001233456665521 11
Q ss_pred HHHHHhhhhcCCHHHHHHHHHHhhccCCCCCCCCCCC-CCeEEEEEecCCccccchhhHHhhhc
Q 019962 256 REELAAKKVAMTLEEVRERMRNVLSLTDVTRFPIPKI-PNAVIFVAATVSTVFDYHHEEVLKMD 318 (333)
Q Consensus 256 ~~~l~~~~~~lt~~~a~~rl~~~l~~t~l~nf~~p~d-p~~ilvV~g~~D~yVP~~~~~~L~~~ 318 (333)
.. .. .+.++++ | .|-|.|..|..||..-+..|...
T Consensus 153 ~~------------------~~--------~~~~~i~~P--SLHi~G~~D~iv~~~~s~~L~~~ 188 (230)
T KOG2551|consen 153 LD------------------ES--------AYKRPLSTP--SLHIFGETDTIVPSERSEQLAES 188 (230)
T ss_pred hh------------------hh--------hhccCCCCC--eeEEecccceeecchHHHHHHHh
Confidence 11 00 0223433 5 67799999999999988877654
No 154
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=93.80 E-value=0.25 Score=42.31 Aligned_cols=79 Identities=24% Similarity=0.261 Sum_probs=47.6
Q ss_pred hchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHHhcCCCeeeEeeechhHHHHHH
Q 019962 138 LGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEWEAGFGKMGVCGLSMGGVHAAM 217 (333)
Q Consensus 138 la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl 217 (333)
++..|. ..+.++.++.|.++...+... .+.++ +..+.+.+....+..++.+.|.||||.+|..
T Consensus 18 ~~~~l~-~~~~v~~~~~~g~~~~~~~~~------~~~~~----------~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~ 80 (212)
T smart00824 18 LAAALR-GRRDVSALPLPGFGPGEPLPA------SADAL----------VEAQAEAVLRAAGGRPFVLVGHSSGGLLAHA 80 (212)
T ss_pred HHHhcC-CCccEEEecCCCCCCCCCCCC------CHHHH----------HHHHHHHHHHhcCCCCeEEEEECHHHHHHHH
Confidence 444443 368899999999976544321 11111 1223333332455688999999999999988
Q ss_pred hhhc---CCCceeeecccC
Q 019962 218 VGSL---HPTPVATLPFLS 233 (333)
Q Consensus 218 ~A~~---~P~~v~~vp~~~ 233 (333)
+|.. .+..+..+.++.
T Consensus 81 ~a~~l~~~~~~~~~l~~~~ 99 (212)
T smart00824 81 VAARLEARGIPPAAVVLLD 99 (212)
T ss_pred HHHHHHhCCCCCcEEEEEc
Confidence 8774 333444454443
No 155
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=93.64 E-value=0.63 Score=43.48 Aligned_cols=55 Identities=15% Similarity=0.090 Sum_probs=35.4
Q ss_pred HHHHHHHHHhcCCCeeeEeeechhHHHHHHhhh----cCC-----CceeeecccCCCCcccccc
Q 019962 188 RCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGS----LHP-----TPVATLPFLSPHSAVVAFC 242 (333)
Q Consensus 188 r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~----~~P-----~~v~~vp~~~~~ta~~vft 242 (333)
..++..|.+..+..+|+|.++|||+++...+-. ..+ ..+..+.+++|--....|.
T Consensus 80 ~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d~f~ 143 (233)
T PF05990_consen 80 ARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDNDVFR 143 (233)
T ss_pred HHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHHHHH
Confidence 445555552348899999999999999877522 222 2556677776554444443
No 156
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=93.55 E-value=0.84 Score=46.78 Aligned_cols=104 Identities=17% Similarity=0.170 Sum_probs=69.5
Q ss_pred CCCceEEEEecCCCChhHHH---hh-hhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHH
Q 019962 115 PQKMACVVHLAGTGDHTFER---RL-RLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCL 190 (333)
Q Consensus 115 ~~~~v~viH~aG~Gd~~~~~---r~-~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~l 190 (333)
+.+|++++| -.-...|.. +. .+.+-|+++|..|.++.. |-|+.+.. -.+.+|+..-|. -..
T Consensus 106 ~~~PlLiVp--P~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw-----~nPd~~~~--~~~~edYi~e~l------~~a 170 (445)
T COG3243 106 LKRPLLIVP--PWINKFYILDLSPEKSLVRWLLEQGLDVFVISW-----RNPDASLA--AKNLEDYILEGL------SEA 170 (445)
T ss_pred CCCceEeec--cccCceeEEeCCCCccHHHHHHHcCCceEEEec-----cCchHhhh--hccHHHHHHHHH------HHH
Confidence 568887777 333555532 12 478888899999988764 44443322 356666664422 222
Q ss_pred HHHHHHhcCCCeeeEeeechhHHHHHHhhhcCCCc-eeeecccC
Q 019962 191 LHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPTP-VATLPFLS 233 (333)
Q Consensus 191 l~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~-v~~vp~~~ 233 (333)
++..++..|..+|.+.|.+.||-.++.+++..+.. |..+.++.
T Consensus 171 id~v~~itg~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lt 214 (445)
T COG3243 171 IDTVKDITGQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLT 214 (445)
T ss_pred HHHHHHHhCccccceeeEecchHHHHHHHHhhhhcccccceeee
Confidence 33344467889999999999999999999888876 77776664
No 157
>PLN02310 triacylglycerol lipase
Probab=93.25 E-value=0.086 Score=53.56 Aligned_cols=38 Identities=21% Similarity=0.311 Sum_probs=28.1
Q ss_pred hHHHHHHHHHHHHHhcCCCeeeEeeechhHHHHHHhhh
Q 019962 183 TIEEARCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGS 220 (333)
Q Consensus 183 ~i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~ 220 (333)
.+.|.+.|++...+....-+|.|||+||||.+|+++|.
T Consensus 191 Vl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~ 228 (405)
T PLN02310 191 VMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAY 228 (405)
T ss_pred HHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHH
Confidence 45666777765541122458999999999999999885
No 158
>COG0627 Predicted esterase [General function prediction only]
Probab=92.83 E-value=0.27 Score=48.42 Aligned_cols=32 Identities=28% Similarity=0.372 Sum_probs=26.3
Q ss_pred eeeEeeechhHHHHHHhhhcCCCceeeecccC
Q 019962 202 KMGVCGLSMGGVHAAMVGSLHPTPVATLPFLS 233 (333)
Q Consensus 202 ~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~ 233 (333)
+-+|+|+||||+-|..+|+.+|+.-..+--+|
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~S 184 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPDRFKSASSFS 184 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcchhceecccc
Confidence 89999999999999999999987555444333
No 159
>PLN02162 triacylglycerol lipase
Probab=92.63 E-value=0.16 Score=52.49 Aligned_cols=34 Identities=29% Similarity=0.283 Sum_probs=25.1
Q ss_pred HHHHHH-HHHHHhcCCCeeeEeeechhHHHHHHhhh
Q 019962 186 EARCLL-HWLEWEAGFGKMGVCGLSMGGVHAAMVGS 220 (333)
Q Consensus 186 E~r~ll-~wl~~~~g~~~vgv~G~SMGG~~Asl~A~ 220 (333)
+++..+ +.+. +.+.-++.|||+||||++|.++|+
T Consensus 263 ~I~~~L~~lL~-k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 263 TIRQMLRDKLA-RNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHH-hCCCceEEEEecChHHHHHHHHHH
Confidence 344333 3444 556679999999999999999876
No 160
>PLN03037 lipase class 3 family protein; Provisional
Probab=92.61 E-value=0.17 Score=52.85 Aligned_cols=58 Identities=24% Similarity=0.471 Sum_probs=38.4
Q ss_pred hHHHHHHHHHHHHHhcC-CCeeeEeeechhHHHHHHhhhc----CCC--ceeeecccCCCCccccc
Q 019962 183 TIEEARCLLHWLEWEAG-FGKMGVCGLSMGGVHAAMVGSL----HPT--PVATLPFLSPHSAVVAF 241 (333)
Q Consensus 183 ~i~E~r~ll~wl~~~~g-~~~vgv~G~SMGG~~Asl~A~~----~P~--~v~~vp~~~~~ta~~vf 241 (333)
.+.|.+.|++... ..| .-+|.|||+||||.+|.+.|.. .|. ++.++.+=+|-.....|
T Consensus 300 Vl~eV~rLv~~Yk-~~ge~~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGsPRVGN~aF 364 (525)
T PLN03037 300 VMEEVKRLVNFFK-DRGEEVSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGAPRVGNLAF 364 (525)
T ss_pred HHHHHHHHHHhcc-ccCCcceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecCCCccCHHH
Confidence 4567788887765 333 3579999999999999999853 332 34444444455544444
No 161
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=92.39 E-value=0.6 Score=47.01 Aligned_cols=75 Identities=20% Similarity=0.276 Sum_probs=53.8
Q ss_pred hchHHHhcCccEEEeecccCCCC--CCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHHhcCC--CeeeEeeechhHH
Q 019962 138 LGGPLLKENIATMVLESPFYGQR--RPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEWEAGF--GKMGVCGLSMGGV 213 (333)
Q Consensus 138 la~pL~~~Gi~~ill~~Py~G~R--kP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~~~g~--~~vgv~G~SMGG~ 213 (333)
++-|+ +.||.|+-...|+++.+ -|-.+ ...+. +.+++++.-+.+|+ +-|.+-|-|.||+
T Consensus 261 m~tP~-~lgYsvLGwNhPGFagSTG~P~p~---n~~nA-------------~DaVvQfAI~~Lgf~~edIilygWSIGGF 323 (517)
T KOG1553|consen 261 MNTPA-QLGYSVLGWNHPGFAGSTGLPYPV---NTLNA-------------ADAVVQFAIQVLGFRQEDIILYGWSIGGF 323 (517)
T ss_pred ecChH-HhCceeeccCCCCccccCCCCCcc---cchHH-------------HHHHHHHHHHHcCCCccceEEEEeecCCc
Confidence 45554 47999999999999665 33322 11222 24555555556776 7899999999999
Q ss_pred HHHHhhhcCCCceeee
Q 019962 214 HAAMVGSLHPTPVATL 229 (333)
Q Consensus 214 ~Asl~A~~~P~~v~~v 229 (333)
.++-+|+++|+..+++
T Consensus 324 ~~~waAs~YPdVkavv 339 (517)
T KOG1553|consen 324 PVAWAASNYPDVKAVV 339 (517)
T ss_pred hHHHHhhcCCCceEEE
Confidence 9999999999766555
No 162
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=92.28 E-value=0.23 Score=49.76 Aligned_cols=86 Identities=15% Similarity=0.111 Sum_probs=53.0
Q ss_pred hhhhchHHHhcCccE--EEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHHhcCCCeeeEeeechhH
Q 019962 135 RLRLGGPLLKENIAT--MVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEWEAGFGKMGVCGLSMGG 212 (333)
Q Consensus 135 r~~la~pL~~~Gi~~--ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~~~g~~~vgv~G~SMGG 212 (333)
+..+.+.|.+.||.. .++-+||=-+..|. + ..+++ .+.+.++.-+. +....+|.|+|+||||
T Consensus 67 ~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~-~-------~~~~~-------~~lk~~ie~~~-~~~~~kv~li~HSmGg 130 (389)
T PF02450_consen 67 FAKLIENLEKLGYDRGKDLFAAPYDWRLSPA-E-------RDEYF-------TKLKQLIEEAY-KKNGKKVVLIAHSMGG 130 (389)
T ss_pred HHHHHHHHHhcCcccCCEEEEEeechhhchh-h-------HHHHH-------HHHHHHHHHHH-HhcCCcEEEEEeCCCc
Confidence 337888999889865 45666665444433 1 11111 22355555554 3337899999999999
Q ss_pred HHHHHhhhcCC------CceeeecccCCCC
Q 019962 213 VHAAMVGSLHP------TPVATLPFLSPHS 236 (333)
Q Consensus 213 ~~Asl~A~~~P------~~v~~vp~~~~~t 236 (333)
.++..+-...+ +-|..+..+|+..
T Consensus 131 l~~~~fl~~~~~~~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 131 LVARYFLQWMPQEEWKDKYIKRFISIGTPF 160 (389)
T ss_pred hHHHHHHHhccchhhHHhhhhEEEEeCCCC
Confidence 99977644332 2466666666433
No 163
>PLN00413 triacylglycerol lipase
Probab=92.24 E-value=0.15 Score=52.78 Aligned_cols=31 Identities=23% Similarity=0.321 Sum_probs=24.6
Q ss_pred HHHHHHHHhcCCCeeeEeeechhHHHHHHhhh
Q 019962 189 CLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGS 220 (333)
Q Consensus 189 ~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~ 220 (333)
.+.+.++ +.+..++.|||+||||++|+++|+
T Consensus 273 ~Lk~ll~-~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 273 HLKEIFD-QNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHH-HCCCCeEEEEecCHHHHHHHHHHH
Confidence 3444444 566778999999999999999985
No 164
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=92.18 E-value=0.2 Score=46.00 Aligned_cols=59 Identities=31% Similarity=0.233 Sum_probs=42.8
Q ss_pred HHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCcccccccccc
Q 019962 188 RCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAVVAFCEGIL 246 (333)
Q Consensus 188 r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta~~vfteGvl 246 (333)
+++-.|..++.=-++..+.|-||||++|+.+.-.+|+.-.++.-+|+..-..-|..|..
T Consensus 88 ~AyerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdardffg~yy 146 (227)
T COG4947 88 RAYERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDARDFFGGYY 146 (227)
T ss_pred HHHHHHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceeeHHHhccccc
Confidence 56666766322236688999999999999999999998888877776554444444433
No 165
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=92.10 E-value=0.35 Score=47.63 Aligned_cols=37 Identities=27% Similarity=0.363 Sum_probs=31.5
Q ss_pred hcCCCeeeEeeechhHHHHHHhhhcCC--CceeeecccC
Q 019962 197 EAGFGKMGVCGLSMGGVHAAMVGSLHP--TPVATLPFLS 233 (333)
Q Consensus 197 ~~g~~~vgv~G~SMGG~~Asl~A~~~P--~~v~~vp~~~ 233 (333)
..|..++-+.|+||||.++-..+...+ ..++.+.-++
T Consensus 123 ~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~ 161 (336)
T COG1075 123 KTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLG 161 (336)
T ss_pred hcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEec
Confidence 567799999999999999999999988 6666666665
No 166
>PLN02324 triacylglycerol lipase
Probab=91.99 E-value=0.2 Score=51.11 Aligned_cols=20 Identities=20% Similarity=0.336 Sum_probs=18.4
Q ss_pred CeeeEeeechhHHHHHHhhh
Q 019962 201 GKMGVCGLSMGGVHAAMVGS 220 (333)
Q Consensus 201 ~~vgv~G~SMGG~~Asl~A~ 220 (333)
-+|.|||+||||.+|.|+|.
T Consensus 215 ~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 215 ISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred ceEEEecCcHHHHHHHHHHH
Confidence 37999999999999999986
No 167
>PLN02571 triacylglycerol lipase
Probab=91.76 E-value=0.2 Score=51.16 Aligned_cols=37 Identities=19% Similarity=0.261 Sum_probs=25.0
Q ss_pred hHHHHHHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhc
Q 019962 183 TIEEARCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSL 221 (333)
Q Consensus 183 ~i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~ 221 (333)
.+.|.+.+++-.. ...-+|.|||+||||.+|.++|..
T Consensus 210 vl~eV~~L~~~y~--~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 210 VLNEVGRLVEKYK--DEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHhcC--cccccEEEeccchHHHHHHHHHHH
Confidence 3455555553322 112379999999999999999864
No 168
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=91.68 E-value=0.77 Score=46.76 Aligned_cols=112 Identities=13% Similarity=0.094 Sum_probs=71.1
Q ss_pred CceEEEEecCCCChh--HHHh---hhhchHHHhcCccEEEeecccCC--CC----CCCcccCcccchhhhHHHhhhhhHH
Q 019962 117 KMACVVHLAGTGDHT--FERR---LRLGGPLLKENIATMVLESPFYG--QR----RPLLQRGAKLLCVSDLLLLGRATIE 185 (333)
Q Consensus 117 ~~v~viH~aG~Gd~~--~~~r---~~la~pL~~~Gi~~ill~~Py~G--~R----kP~~q~~s~l~~vsd~~~~g~~~i~ 185 (333)
+||.+.| |--+++ |-.+ ..++--|+.+||+|.+-.+=+.. ++ .|..+...=.+++ -.=+..
T Consensus 74 p~Vll~H--GLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~------~Em~~y 145 (403)
T KOG2624|consen 74 PVVLLQH--GLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSW------HEMGTY 145 (403)
T ss_pred CcEEEee--ccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCCcceeecch------hhhhhc
Confidence 4444555 766443 3333 24788888999999996543321 00 1110100000111 011234
Q ss_pred HHHHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCCC---ceeeecccCCCC
Q 019962 186 EARCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPT---PVATLPFLSPHS 236 (333)
Q Consensus 186 E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~---~v~~vp~~~~~t 236 (333)
|.-+.++++.+..|.++++.+|+|-|+.+.-...+..|+ .|.....+||..
T Consensus 146 DLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 146 DLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred CHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 567889998878899999999999999999999999887 567777777755
No 169
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=91.66 E-value=1.4 Score=40.43 Aligned_cols=82 Identities=16% Similarity=0.057 Sum_probs=46.5
Q ss_pred ceEEEEecCCCChhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHHh
Q 019962 118 MACVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEWE 197 (333)
Q Consensus 118 ~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~~ 197 (333)
|+++|- ||.+..--.-.+.+..-.+.|+.++++..|...---|. ..+ -.-+..+++.+.+.
T Consensus 1 plvvl~--gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~----~~~-------------~~~~~~l~~~l~~~ 61 (240)
T PF05705_consen 1 PLVVLL--GWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS----KRL-------------APAADKLLELLSDS 61 (240)
T ss_pred CEEEEE--eCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec----cch-------------HHHHHHHHHHhhhh
Confidence 444444 77744322222344555558999999887755332222 111 11125577777632
Q ss_pred cCC--CeeeEeeechhHHHHHHh
Q 019962 198 AGF--GKMGVCGLSMGGVHAAMV 218 (333)
Q Consensus 198 ~g~--~~vgv~G~SMGG~~Asl~ 218 (333)
... .++.+..+|+||......
T Consensus 62 ~~~~~~~il~H~FSnGG~~~~~~ 84 (240)
T PF05705_consen 62 QSASPPPILFHSFSNGGSFLYSQ 84 (240)
T ss_pred ccCCCCCEEEEEEECchHHHHHH
Confidence 222 399999999988765543
No 170
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=91.41 E-value=1.6 Score=41.75 Aligned_cols=92 Identities=21% Similarity=0.200 Sum_probs=59.3
Q ss_pred CceEEEEecCCC---ChhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHH
Q 019962 117 KMACVVHLAGTG---DHTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHW 193 (333)
Q Consensus 117 ~~v~viH~aG~G---d~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~w 193 (333)
+|..|||.-|.- ...---++.|-+.|+++||.|+. -||-.. + |..........+-+..++-
T Consensus 15 ~P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViA--tPy~~t-------------f-DH~~~A~~~~~~f~~~~~~ 78 (250)
T PF07082_consen 15 RPKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIA--TPYVVT-------------F-DHQAIAREVWERFERCLRA 78 (250)
T ss_pred CCCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEE--EecCCC-------------C-cHHHHHHHHHHHHHHHHHH
Confidence 566778865543 33333344688899999999988 666321 1 4444444444444556666
Q ss_pred HHHhcCC----CeeeEeeechhHHHHHHhhhcCCC
Q 019962 194 LEWEAGF----GKMGVCGLSMGGVHAAMVGSLHPT 224 (333)
Q Consensus 194 l~~~~g~----~~vgv~G~SMGG~~Asl~A~~~P~ 224 (333)
|.++.+. -|+.=+|+|||.-.-+++++..+.
T Consensus 79 L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~~ 113 (250)
T PF07082_consen 79 LQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFDV 113 (250)
T ss_pred HHHhcCCCcccCCeeeeecccchHHHHHHhhhccC
Confidence 6633333 356669999999999999987654
No 171
>PLN02454 triacylglycerol lipase
Probab=90.94 E-value=0.49 Score=48.33 Aligned_cols=20 Identities=20% Similarity=0.237 Sum_probs=18.1
Q ss_pred eeeEeeechhHHHHHHhhhc
Q 019962 202 KMGVCGLSMGGVHAAMVGSL 221 (333)
Q Consensus 202 ~vgv~G~SMGG~~Asl~A~~ 221 (333)
+|.|||+||||.+|+++|..
T Consensus 229 sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 229 SIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred eEEEEecCHHHHHHHHHHHH
Confidence 49999999999999999853
No 172
>PLN02934 triacylglycerol lipase
Probab=90.91 E-value=0.31 Score=50.88 Aligned_cols=30 Identities=33% Similarity=0.392 Sum_probs=23.9
Q ss_pred HHHHHHHhcCCCeeeEeeechhHHHHHHhhh
Q 019962 190 LLHWLEWEAGFGKMGVCGLSMGGVHAAMVGS 220 (333)
Q Consensus 190 ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~ 220 (333)
+.+.++ +....++.|||+||||.+|+++|+
T Consensus 311 lk~ll~-~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 311 LKSLLK-EHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHH-HCCCCeEEEeccccHHHHHHHHHH
Confidence 333344 566789999999999999999985
No 173
>PLN02761 lipase class 3 family protein
Probab=90.81 E-value=0.37 Score=50.49 Aligned_cols=38 Identities=21% Similarity=0.226 Sum_probs=26.2
Q ss_pred hHHHHHHHHHHHHHh-c-CCCeeeEeeechhHHHHHHhhh
Q 019962 183 TIEEARCLLHWLEWE-A-GFGKMGVCGLSMGGVHAAMVGS 220 (333)
Q Consensus 183 ~i~E~r~ll~wl~~~-~-g~~~vgv~G~SMGG~~Asl~A~ 220 (333)
.+.|.+.++.....+ . ..-+|.|||+||||.+|.++|.
T Consensus 274 Vl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 274 VLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 455666666544100 1 2347999999999999999984
No 174
>PLN02408 phospholipase A1
Probab=90.60 E-value=0.37 Score=48.44 Aligned_cols=40 Identities=20% Similarity=0.303 Sum_probs=26.5
Q ss_pred eeeEeeechhHHHHHHhhhcC----CC--ceeeecccCCCCccccc
Q 019962 202 KMGVCGLSMGGVHAAMVGSLH----PT--PVATLPFLSPHSAVVAF 241 (333)
Q Consensus 202 ~vgv~G~SMGG~~Asl~A~~~----P~--~v~~vp~~~~~ta~~vf 241 (333)
+|.|||+||||.+|.++|..- +. ++.++.+=+|......|
T Consensus 201 sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGsPRVGN~~F 246 (365)
T PLN02408 201 SLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGGPRVGNRSF 246 (365)
T ss_pred eEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCCCCcccHHH
Confidence 699999999999999998742 21 34444444444444444
No 175
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=90.05 E-value=0.49 Score=46.67 Aligned_cols=56 Identities=27% Similarity=0.309 Sum_probs=36.5
Q ss_pred hhHHHHHHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcC-------CCceeeecccCCCCccccc
Q 019962 182 ATIEEARCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLH-------PTPVATLPFLSPHSAVVAF 241 (333)
Q Consensus 182 ~~i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~-------P~~v~~vp~~~~~ta~~vf 241 (333)
+...|.+.|++-. ..-+|-|||+||||.+|+++|+.. +.++.++..=.|-+....|
T Consensus 156 ~~~~~~~~L~~~~----~~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~PRvGn~~f 218 (336)
T KOG4569|consen 156 GLDAELRRLIELY----PNYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQPRVGNLAF 218 (336)
T ss_pred HHHHHHHHHHHhc----CCcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecCCCcccHHH
Confidence 3445556666443 478999999999999999998742 2355555443344443333
No 176
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.46 E-value=2.2 Score=40.50 Aligned_cols=101 Identities=23% Similarity=0.292 Sum_probs=59.1
Q ss_pred CCceEEEEecCCCChh-HHHhhhhc------------hHHHhcCccEEEeecc----cC-CCCCCCcccCcccchhhhHH
Q 019962 116 QKMACVVHLAGTGDHT-FERRLRLG------------GPLLKENIATMVLESP----FY-GQRRPLLQRGAKLLCVSDLL 177 (333)
Q Consensus 116 ~~~v~viH~aG~Gd~~-~~~r~~la------------~pL~~~Gi~~ill~~P----y~-G~RkP~~q~~s~l~~vsd~~ 177 (333)
.+-.++|||+|.--.| |.||.-+- ++-.+.||+++++.-- || ++|.|..-.++..
T Consensus 101 ~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~v------- 173 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPV------- 173 (297)
T ss_pred cceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchH-------
Confidence 3455679988887555 55543121 2334579999987544 45 5555532222222
Q ss_pred HhhhhhHHHHHHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCCC--ceeeec
Q 019962 178 LLGRATIEEARCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPT--PVATLP 230 (333)
Q Consensus 178 ~~g~~~i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~--~v~~vp 230 (333)
+-+...-..+-.-...+.+.|+-+|-||....-+.-..|. .|..+.
T Consensus 174 -------eh~~yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aia 221 (297)
T KOG3967|consen 174 -------EHAKYVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIA 221 (297)
T ss_pred -------HHHHHHHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEE
Confidence 1122222222214567999999999999998888777664 344443
No 177
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=88.98 E-value=1.3 Score=43.39 Aligned_cols=47 Identities=23% Similarity=0.233 Sum_probs=38.3
Q ss_pred HHHHHHHHHhcCC----CeeeEeeechhHHHHHHhhhcCCCceeeecccCC
Q 019962 188 RCLLHWLEWEAGF----GKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSP 234 (333)
Q Consensus 188 r~ll~wl~~~~g~----~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~ 234 (333)
..|+=|++++... +.-+|+|-||||.+|.++|..+|+..+.|..-||
T Consensus 160 ~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sp 210 (299)
T COG2382 160 QELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSG 210 (299)
T ss_pred HHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCC
Confidence 6788888754333 5568999999999999999999999998876553
No 178
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=88.60 E-value=1.2 Score=48.76 Aligned_cols=115 Identities=18% Similarity=0.207 Sum_probs=63.8
Q ss_pred EEecCCCChhHHHhhhhchHHHh--c-Cc--cEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHH--------HH
Q 019962 122 VHLAGTGDHTFERRLRLGGPLLK--E-NI--ATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEE--------AR 188 (333)
Q Consensus 122 iH~aG~Gd~~~~~r~~la~pL~~--~-Gi--~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E--------~r 188 (333)
+.++|--. +|-.-|.+|-...+ + |+ .+.-.++||.- .++...++ .|+..|-+..+.| ++
T Consensus 93 LFIPGNAG-SyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~------DFFaVDFn-Ee~tAm~G~~l~dQtEYV~dAIk 164 (973)
T KOG3724|consen 93 LFIPGNAG-SYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSF------DFFAVDFN-EEFTAMHGHILLDQTEYVNDAIK 164 (973)
T ss_pred EEecCCCC-chHHHHHHHHHHhhhhcCCchhhhhcccCcccc------ceEEEccc-chhhhhccHhHHHHHHHHHHHHH
Confidence 56555443 35555555544442 1 22 34455566554 22222333 3666666665444 36
Q ss_pred HHHHHHHHhcCC-----CeeeEeeechhHHHHHHhhhcC---CCceeeecccC-CCCcccccccc
Q 019962 189 CLLHWLEWEAGF-----GKMGVCGLSMGGVHAAMVGSLH---PTPVATLPFLS-PHSAVVAFCEG 244 (333)
Q Consensus 189 ~ll~wl~~~~g~-----~~vgv~G~SMGG~~Asl~A~~~---P~~v~~vp~~~-~~ta~~vfteG 244 (333)
.+++-.+++..+ ..|.++|+||||.+|-.+++.- +..|.++.-+| |+.+.+.-.++
T Consensus 165 ~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~a~Pl~~D~ 229 (973)
T KOG3724|consen 165 YILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHAAPPLPLDR 229 (973)
T ss_pred HHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcccCCCCCCcH
Confidence 666666621222 3499999999999998877632 44555555555 66665554444
No 179
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=88.23 E-value=6.7 Score=40.48 Aligned_cols=144 Identities=17% Similarity=0.165 Sum_probs=95.5
Q ss_pred CeEEEeeeeeCCCcccccCCCCccccceeEEEeec-CCCCCCCceEEEEecCCCChh-HHHhhhhchHHHh-cCccEEEe
Q 019962 76 TAVLREGVFRTPCDEQLMSALPPESHNARVAFLAP-KCVPPQKMACVVHLAGTGDHT-FERRLRLGGPLLK-ENIATMVL 152 (333)
Q Consensus 76 ~~~~~~g~F~Sp~~~~~p~~lp~~s~~a~~~~~~p-~~~~~~~~v~viH~aG~Gd~~-~~~r~~la~pL~~-~Gi~~ill 152 (333)
...+++..|.-|+++..=. ...|=.-++++- .+|.+-..++..-..-=||-. |..+..|-..++. .+--++..
T Consensus 42 ~~~ye~~yf~q~LDHFsF~----~~~tF~qRylin~~fw~~g~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFa 117 (492)
T KOG2183|consen 42 EYNYETRYFQQPLDHFSFT----DNKTFDQRYLINDDFWKKGEGPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFA 117 (492)
T ss_pred cccceeEEeeccccccccc----CccceeeEEEEecccccCCCCceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEe
Confidence 4456788898888776433 334444445543 678765344445522222332 4445455556664 68889999
Q ss_pred ecccCCCCCCCccc-CcccchhhhHHHhhhhhHHHHHHHHHHHHHhc---CCCeeeEeeechhHHHHHHhhhcCCCce
Q 019962 153 ESPFYGQRRPLLQR-GAKLLCVSDLLLLGRATIEEARCLLHWLEWEA---GFGKMGVCGLSMGGVHAAMVGSLHPTPV 226 (333)
Q Consensus 153 ~~Py~G~RkP~~q~-~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~~~---g~~~vgv~G~SMGG~~Asl~A~~~P~~v 226 (333)
|-=|||++-|=+.. +....+. +++ ...++.+|=..++..|+ +. ...+|...|-|-||-.|+-+=..+|.++
T Consensus 118 EHRyYGeS~PFG~~s~k~~~hl-gyL-tseQALADfA~ll~~lK-~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv 192 (492)
T KOG2183|consen 118 EHRYYGESLPFGSQSYKDARHL-GYL-TSEQALADFAELLTFLK-RDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIV 192 (492)
T ss_pred ehhccccCCCCcchhccChhhh-ccc-cHHHHHHHHHHHHHHHh-hccccccCcEEEecCchhhHHHHHHHhcChhhh
Confidence 99999999998865 3333333 222 22457778888888888 44 3589999999999999999888999854
No 180
>PLN02802 triacylglycerol lipase
Probab=88.03 E-value=0.47 Score=49.51 Aligned_cols=21 Identities=29% Similarity=0.328 Sum_probs=18.8
Q ss_pred CeeeEeeechhHHHHHHhhhc
Q 019962 201 GKMGVCGLSMGGVHAAMVGSL 221 (333)
Q Consensus 201 ~~vgv~G~SMGG~~Asl~A~~ 221 (333)
-.|.|||+||||.+|.++|..
T Consensus 330 ~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 330 LSITVTGHSLGAALALLVADE 350 (509)
T ss_pred ceEEEeccchHHHHHHHHHHH
Confidence 479999999999999998863
No 181
>PLN02719 triacylglycerol lipase
Probab=87.60 E-value=0.52 Score=49.29 Aligned_cols=38 Identities=26% Similarity=0.316 Sum_probs=25.0
Q ss_pred hHHHHHHHHHHHHHhcC-CCeeeEeeechhHHHHHHhhh
Q 019962 183 TIEEARCLLHWLEWEAG-FGKMGVCGLSMGGVHAAMVGS 220 (333)
Q Consensus 183 ~i~E~r~ll~wl~~~~g-~~~vgv~G~SMGG~~Asl~A~ 220 (333)
.+.|.+.+++--....| .-+|.|||+||||.+|+|+|.
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHH
Confidence 34455555533220011 258999999999999999885
No 182
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=87.42 E-value=7.2 Score=39.86 Aligned_cols=111 Identities=14% Similarity=0.046 Sum_probs=66.8
Q ss_pred CeeeEeeechhHHHHHHhhhcCCCceeeecccCC-CCccccccc----ccccc------------------CccHHHHHH
Q 019962 201 GKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSP-HSAVVAFCE----GILKH------------------GTAWEALRE 257 (333)
Q Consensus 201 ~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~-~ta~~vfte----Gvl~~------------------~~~w~~L~~ 257 (333)
-|+.+.|.|-||++|.|.|--.|--+..|.-=|. +-+...+.- |..++ .+-|..-+.
T Consensus 184 lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p~l~~I~Gre~~~~~y~~~~~~~~~~~~~i~~~~Kt~Wt~n~~ 263 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALPPLRYIFGREIDFMKYICSGEFFNFKNIRIYCFDKTFWTRNKN 263 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhCccceeEEEecCccccchhheeeeeecCcccccccccccccCCEEEEEEeccccccCCC
Confidence 3899999999999999999999986666654331 111101100 11111 111211000
Q ss_pred HHHhhhhcCCHHHHHHHHHHhhccCCCCCCCCCCCCC-eEEEEEecCCccccchhhHHhhhc
Q 019962 258 ELAAKKVAMTLEEVRERMRNVLSLTDVTRFPIPKIPN-AVIFVAATVSTVFDYHHEEVLKMD 318 (333)
Q Consensus 258 ~l~~~~~~lt~~~a~~rl~~~l~~t~l~nf~~p~dp~-~ilvV~g~~D~yVP~~~~~~L~~~ 318 (333)
-+... ..++...|.+++..|+...+. ++|+ -.+..++..|.++|.+.-+.|-+.
T Consensus 264 ----S~~~F--s~~~~~IR~iLn~~HL~iqs~-~n~~~~yvsYHs~~D~~~p~~~K~~l~~~ 318 (403)
T PF11144_consen 264 ----SPYYF--SKARYIIRSILNPDHLKIQSN-YNKKIIYVSYHSIKDDLAPAEDKEELYEI 318 (403)
T ss_pred ----Ccccc--ChHHHHHHHhcChHHHHHHHh-cccceEEEEEeccCCCCCCHHHHHHHHHH
Confidence 00001 346777888889999866643 2222 467789999999999887777553
No 183
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=87.36 E-value=3 Score=42.00 Aligned_cols=124 Identities=13% Similarity=0.098 Sum_probs=64.6
Q ss_pred cceeEEEeecCCCCCC--CceE-EEEecCCC-ChhHHHhhhhchHHHhcCccEEEeecccCCCC-CCCcccCcccchhhh
Q 019962 101 HNARVAFLAPKCVPPQ--KMAC-VVHLAGTG-DHTFERRLRLGGPLLKENIATMVLESPFYGQR-RPLLQRGAKLLCVSD 175 (333)
Q Consensus 101 ~~a~~~~~~p~~~~~~--~~v~-viH~aG~G-d~~~~~r~~la~pL~~~Gi~~ill~~Py~G~R-kP~~q~~s~l~~vsd 175 (333)
..=+.+++.|..-... .||+ .|||.|.- .++-.....-..-++++++=++.+. .| -+-+- ....|
T Consensus 107 DCL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~n-----YRlg~~Gf-----l~~~~ 176 (535)
T PF00135_consen 107 DCLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTIN-----YRLGAFGF-----LSLGD 176 (535)
T ss_dssp ---EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE---------HHHHH------BSSS
T ss_pred hHHHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEec-----cccccccc-----ccccc
Confidence 5568888999875433 5764 66655544 3330011112222334555555532 23 00000 00001
Q ss_pred HHH-hhhhhHHHHHHHHHHHHHhc---C--CCeeeEeeechhHHHHHHhhhc--CCCceeeecccCC
Q 019962 176 LLL-LGRATIEEARCLLHWLEWEA---G--FGKMGVCGLSMGGVHAAMVGSL--HPTPVATLPFLSP 234 (333)
Q Consensus 176 ~~~-~g~~~i~E~r~ll~wl~~~~---g--~~~vgv~G~SMGG~~Asl~A~~--~P~~v~~vp~~~~ 234 (333)
.-. .|-.++.|-+..|+|.++.- | -.+|-|.|.|-||..+.+.... .......+.++|+
T Consensus 177 ~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG 243 (535)
T PF00135_consen 177 LDAPSGNYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSG 243 (535)
T ss_dssp TTSHBSTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES-
T ss_pred cccCchhhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccc
Confidence 111 24557889999999998421 2 2899999999999988877654 1235666666765
No 184
>PLN02753 triacylglycerol lipase
Probab=87.34 E-value=0.59 Score=49.05 Aligned_cols=37 Identities=22% Similarity=0.203 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHhc-CCCeeeEeeechhHHHHHHhhh
Q 019962 184 IEEARCLLHWLEWEA-GFGKMGVCGLSMGGVHAAMVGS 220 (333)
Q Consensus 184 i~E~r~ll~wl~~~~-g~~~vgv~G~SMGG~~Asl~A~ 220 (333)
+.|.+.+++--..+. ..-+|.|||+||||.+|.|+|.
T Consensus 294 l~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 294 LTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 444555554332011 1368999999999999999985
No 185
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=87.13 E-value=1.1 Score=41.93 Aligned_cols=23 Identities=35% Similarity=0.356 Sum_probs=20.4
Q ss_pred CeeeEeeechhHHHHHHhhhcCC
Q 019962 201 GKMGVCGLSMGGVHAAMVGSLHP 223 (333)
Q Consensus 201 ~~vgv~G~SMGG~~Asl~A~~~P 223 (333)
+++.|+|+|+||..|..+|+..+
T Consensus 84 ~~i~v~GHSkGGnLA~yaa~~~~ 106 (224)
T PF11187_consen 84 GKIYVTGHSKGGNLAQYAAANCD 106 (224)
T ss_pred CCEEEEEechhhHHHHHHHHHcc
Confidence 46999999999999999998843
No 186
>PLN02847 triacylglycerol lipase
Probab=86.41 E-value=1.2 Score=47.65 Aligned_cols=25 Identities=32% Similarity=0.352 Sum_probs=21.5
Q ss_pred hcCCCeeeEeeechhHHHHHHhhhc
Q 019962 197 EAGFGKMGVCGLSMGGVHAAMVGSL 221 (333)
Q Consensus 197 ~~g~~~vgv~G~SMGG~~Asl~A~~ 221 (333)
+...-+|.|+|+||||.+|++++..
T Consensus 247 ~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 247 EYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HCCCCeEEEeccChHHHHHHHHHHH
Confidence 4455689999999999999999875
No 187
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=86.32 E-value=11 Score=36.76 Aligned_cols=95 Identities=17% Similarity=0.227 Sum_probs=57.5
Q ss_pred HHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhc
Q 019962 142 LLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSL 221 (333)
Q Consensus 142 L~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~ 221 (333)
.+.+.+.++=++.|++....|.-.......+. ..++ ..+..-|+ ..|+..+.-.|.=.|+++=+..|.+
T Consensus 51 ~i~~~f~i~Hi~aPGqe~ga~~~p~~y~yPsm--------d~LA--e~l~~Vl~-~f~lk~vIg~GvGAGAnIL~rfAl~ 119 (283)
T PF03096_consen 51 EILQNFCIYHIDAPGQEEGAATLPEGYQYPSM--------DQLA--EMLPEVLD-HFGLKSVIGFGVGAGANILARFALK 119 (283)
T ss_dssp HHHTTSEEEEEE-TTTSTT-----TT-----H--------HHHH--CTHHHHHH-HHT---EEEEEETHHHHHHHHHHHH
T ss_pred HHhhceEEEEEeCCCCCCCcccccccccccCH--------HHHH--HHHHHHHH-hCCccEEEEEeeccchhhhhhcccc
Confidence 33478999999999997775553221112222 1111 22444555 6689999999999999999999999
Q ss_pred CCCceeeecccCCCCccccccccccc
Q 019962 222 HPTPVATLPFLSPHSAVVAFCEGILK 247 (333)
Q Consensus 222 ~P~~v~~vp~~~~~ta~~vfteGvl~ 247 (333)
+|+.+--+.++.+..-...|.||...
T Consensus 120 ~p~~V~GLiLvn~~~~~~gw~Ew~~~ 145 (283)
T PF03096_consen 120 HPERVLGLILVNPTCTAAGWMEWFYQ 145 (283)
T ss_dssp SGGGEEEEEEES---S---HHHHHHH
T ss_pred CccceeEEEEEecCCCCccHHHHHHH
Confidence 99999999999998877888887543
No 188
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=86.00 E-value=4 Score=42.10 Aligned_cols=109 Identities=13% Similarity=0.008 Sum_probs=56.0
Q ss_pred ceeEEEeecCCCCCCCceEEEEecCCCChhHH-Hhh-----h----------hchHHHhcCccEEEeecc-cCCCCCCCc
Q 019962 102 NARVAFLAPKCVPPQKMACVVHLAGTGDHTFE-RRL-----R----------LGGPLLKENIATMVLESP-FYGQRRPLL 164 (333)
Q Consensus 102 ~a~~~~~~p~~~~~~~~v~viH~aG~Gd~~~~-~r~-----~----------la~pL~~~Gi~~ill~~P-y~G~RkP~~ 164 (333)
.-.+-++..+.-+.++|+++-.-.|+|.++.. ... + +--.|.+ -.+++.+|.| +.|.+....
T Consensus 62 ~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~-~~~~l~iDqP~G~G~S~~~~ 140 (462)
T PTZ00472 62 HYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNN-EAYVIYVDQPAGVGFSYADK 140 (462)
T ss_pred eEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCccccc-ccCeEEEeCCCCcCcccCCC
Confidence 33444455554445577765555678866533 110 0 1111222 2578888988 444442221
Q ss_pred -ccCcccchhhhHHHhhhhhHHHHH-HHHHHHHH--hcCCCeeeEeeechhHHHHHHhhhc
Q 019962 165 -QRGAKLLCVSDLLLLGRATIEEAR-CLLHWLEW--EAGFGKMGVCGLSMGGVHAAMVGSL 221 (333)
Q Consensus 165 -q~~s~l~~vsd~~~~g~~~i~E~r-~ll~wl~~--~~g~~~vgv~G~SMGG~~Asl~A~~ 221 (333)
....... ....+.. .+..|++. +.+..++.|+|.|+||+.+-.+|..
T Consensus 141 ~~~~~~~~----------~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~ 191 (462)
T PTZ00472 141 ADYDHNES----------EVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYR 191 (462)
T ss_pred CCCCCChH----------HHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHH
Confidence 1111111 1122222 33344431 1234899999999999988777763
No 189
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=85.55 E-value=3 Score=40.42 Aligned_cols=33 Identities=21% Similarity=0.290 Sum_probs=27.9
Q ss_pred HHHHHHHHHhcCCCeeeEeeechhHHHHHHhhh
Q 019962 188 RCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGS 220 (333)
Q Consensus 188 r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~ 220 (333)
..++.+|.++.+++.+-.+|+||||.-..--..
T Consensus 123 k~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~ 155 (288)
T COG4814 123 KKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMI 155 (288)
T ss_pred HHHHHHHHHhcCCceeeeeeeccccHHHHHHHH
Confidence 678889987889999999999999977666544
No 190
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=85.37 E-value=8.4 Score=38.09 Aligned_cols=118 Identities=18% Similarity=0.173 Sum_probs=77.6
Q ss_pred CCceEEEEecCCC-ChhHHHhhh-hchHHHh--cCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHH
Q 019962 116 QKMACVVHLAGTG-DHTFERRLR-LGGPLLK--ENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLL 191 (333)
Q Consensus 116 ~~~v~viH~aG~G-d~~~~~r~~-la~pL~~--~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll 191 (333)
.||+ +|+-+.-| +|-..+... +...+.. +.+-++=++.|++-...|.-...-...+..| + +..|.
T Consensus 45 ~kpa-iiTyhDlglN~~scFq~ff~~p~m~ei~~~fcv~HV~~PGqe~gAp~~p~~y~yPsmd~--------L--Ad~l~ 113 (326)
T KOG2931|consen 45 NKPA-IITYHDLGLNHKSCFQGFFNFPDMAEILEHFCVYHVDAPGQEDGAPSFPEGYPYPSMDD--------L--ADMLP 113 (326)
T ss_pred CCce-EEEecccccchHhHhHHhhcCHhHHHHHhheEEEecCCCccccCCccCCCCCCCCCHHH--------H--HHHHH
Confidence 4777 58888888 553322222 2222221 3388888999998555544321111111111 1 13455
Q ss_pred HHHHHhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCccccccccc
Q 019962 192 HWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAVVAFCEGI 245 (333)
Q Consensus 192 ~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta~~vfteGv 245 (333)
.-|+ ..|...+.=.|.=-|.++=+..|.++|++|--++++.+.+-...|.||.
T Consensus 114 ~VL~-~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew~ 166 (326)
T KOG2931|consen 114 EVLD-HFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEWA 166 (326)
T ss_pred HHHH-hcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHHH
Confidence 5555 6789999999999999999999999999999999999876667776664
No 191
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=84.93 E-value=1.6 Score=46.76 Aligned_cols=37 Identities=22% Similarity=0.244 Sum_probs=26.5
Q ss_pred hcCCCeeeEeeechhHHHHHHhhhcC-CCceeeecccC
Q 019962 197 EAGFGKMGVCGLSMGGVHAAMVGSLH-PTPVATLPFLS 233 (333)
Q Consensus 197 ~~g~~~vgv~G~SMGG~~Asl~A~~~-P~~v~~vp~~~ 233 (333)
+....+|.|+|.|||..++.+++..+ ..-|..++|++
T Consensus 246 efpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCig 283 (784)
T KOG3253|consen 246 EFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIG 283 (784)
T ss_pred cCCCCceEEEecccCceeeEEeccccCCceEEEEEEec
Confidence 44568999999999977777765543 33477777765
No 192
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=84.15 E-value=7.4 Score=40.78 Aligned_cols=116 Identities=19% Similarity=0.167 Sum_probs=82.4
Q ss_pred EeecCCCCCCCceEEEEecCCC-ChhHH-Hhhh-hchHHHh-cCccEEEeecccCCCCCCCcccCcccchhhhHH-Hhhh
Q 019962 107 FLAPKCVPPQKMACVVHLAGTG-DHTFE-RRLR-LGGPLLK-ENIATMVLESPFYGQRRPLLQRGAKLLCVSDLL-LLGR 181 (333)
Q Consensus 107 ~~~p~~~~~~~~v~viH~aG~G-d~~~~-~r~~-la~pL~~-~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~-~~g~ 181 (333)
++-+++|....-++.+++.|=| .+..| .+.. --..+++ .|-.|+.+|-=|||++.|-.. .+.+++- ....
T Consensus 75 ~y~n~~~~~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~-----~st~nlk~LSs~ 149 (514)
T KOG2182|consen 75 FYNNNQWAKPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGD-----LSTSNLKYLSSL 149 (514)
T ss_pred eeeccccccCCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCC-----CcccchhhhhHH
Confidence 4568888544333468888888 44444 4433 4566777 599999999999999966643 2222222 3445
Q ss_pred hhHHHHHHHHHHHHHhcCC---CeeeEeeechhHHHHHHhhhcCCCcee
Q 019962 182 ATIEEARCLLHWLEWEAGF---GKMGVCGLSMGGVHAAMVGSLHPTPVA 227 (333)
Q Consensus 182 ~~i~E~r~ll~wl~~~~g~---~~vgv~G~SMGG~~Asl~A~~~P~~v~ 227 (333)
++++|+..++.-+....+. .|....|-|-=|.+|+-+=..+|+.+.
T Consensus 150 QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~ 198 (514)
T KOG2182|consen 150 QALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTV 198 (514)
T ss_pred HHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhhe
Confidence 6788888888888744433 389999999999999999999999653
No 193
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=81.47 E-value=2.4 Score=41.86 Aligned_cols=27 Identities=22% Similarity=0.271 Sum_probs=22.6
Q ss_pred hcCCCeeeEeeechhHHHHHHhhhcCC
Q 019962 197 EAGFGKMGVCGLSMGGVHAAMVGSLHP 223 (333)
Q Consensus 197 ~~g~~~vgv~G~SMGG~~Asl~A~~~P 223 (333)
...-.+|-+||+|+||.+|+++...+-
T Consensus 272 ~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 272 IYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred hCCCceEEEeccccchHHHHHhccccC
Confidence 445689999999999999999976553
No 194
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=81.47 E-value=2.4 Score=41.86 Aligned_cols=27 Identities=22% Similarity=0.271 Sum_probs=22.6
Q ss_pred hcCCCeeeEeeechhHHHHHHhhhcCC
Q 019962 197 EAGFGKMGVCGLSMGGVHAAMVGSLHP 223 (333)
Q Consensus 197 ~~g~~~vgv~G~SMGG~~Asl~A~~~P 223 (333)
...-.+|-+||+|+||.+|+++...+-
T Consensus 272 ~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 272 IYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred hCCCceEEEeccccchHHHHHhccccC
Confidence 445689999999999999999976553
No 195
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=81.11 E-value=2.7 Score=45.05 Aligned_cols=76 Identities=12% Similarity=-0.061 Sum_probs=46.0
Q ss_pred hHHHhhhhchHHHhcCccEE-EeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHHhcCCCeeeEeeec
Q 019962 131 TFERRLRLGGPLLKENIATM-VLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEWEAGFGKMGVCGLS 209 (333)
Q Consensus 131 ~~~~r~~la~pL~~~Gi~~i-ll~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~~~g~~~vgv~G~S 209 (333)
+||-+..+.+.|++.||.-. ++..||=-+..|... ..-.++|. ..+.++..+.+..|..+|.|+|+|
T Consensus 154 gY~vw~kLIe~L~~iGY~~~nL~gAPYDWRls~~~l-----e~rd~YF~-------rLK~lIE~ay~~nggkKVVLV~HS 221 (642)
T PLN02517 154 GYFVWAVLIANLARIGYEEKNMYMAAYDWRLSFQNT-----EVRDQTLS-------RLKSNIELMVATNGGKKVVVVPHS 221 (642)
T ss_pred cceeHHHHHHHHHHcCCCCCceeecccccccCccch-----hhhhHHHH-------HHHHHHHHHHHHcCCCeEEEEEeC
Confidence 46655578999999888733 333444433332211 11112221 236666666534567899999999
Q ss_pred hhHHHHHHh
Q 019962 210 MGGVHAAMV 218 (333)
Q Consensus 210 MGG~~Asl~ 218 (333)
|||.++..+
T Consensus 222 MGglv~lyF 230 (642)
T PLN02517 222 MGVLYFLHF 230 (642)
T ss_pred CchHHHHHH
Confidence 999998875
No 196
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=80.66 E-value=2.1 Score=43.55 Aligned_cols=118 Identities=18% Similarity=0.151 Sum_probs=69.3
Q ss_pred HHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCccccccccccc-----cCccHH-HHHHHHHhh
Q 019962 189 CLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAVVAFCEGILK-----HGTAWE-ALREELAAK 262 (333)
Q Consensus 189 ~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta~~vfteGvl~-----~~~~w~-~L~~~l~~~ 262 (333)
-.-+.|+ ...+....|+|.|=-|+.+=|.|..+|+.-+++|++. ...=++..|. |.-+|. ++.--++.
T Consensus 223 lAq~eL~-q~~Ik~F~VTGaSKRgWttwLTAIaDprv~aIvp~v~----D~Lni~a~L~hiyrsYGgnwpi~l~pyyae- 296 (507)
T COG4287 223 LAQDELE-QVEIKGFMVTGASKRGWTTWLTAIADPRVFAIVPFVY----DNLNIEAQLLHIYRSYGGNWPIKLAPYYAE- 296 (507)
T ss_pred HHHhhhh-heeeeeEEEeccccchHHHHHHHhcCcchhhhhhhHH----hhcccHHHHHHHHHhhCCCCCcccchhHhh-
Confidence 3345555 5678999999999999999999999999999888753 1111333332 244442 11110001
Q ss_pred hhcCCHHHHHHHHHHhhccCCCCCCCCC-CCCC---eEEEEEecCCccccchhhHH
Q 019962 263 KVAMTLEEVRERMRNVLSLTDVTRFPIP-KIPN---AVIFVAATVSTVFDYHHEEV 314 (333)
Q Consensus 263 ~~~lt~~~a~~rl~~~l~~t~l~nf~~p-~dp~---~ilvV~g~~D~yVP~~~~~~ 314 (333)
.+.+..--...+.+++..++..|..- +.++ .=.+|.|.+|.|.++|++..
T Consensus 297 --gi~erl~tp~fkqL~~IiDPlay~~try~~RLalpKyivnaSgDdff~pDsa~l 350 (507)
T COG4287 297 --GIDERLETPLFKQLLEIIDPLAYRNTRYQLRLALPKYIVNASGDDFFVPDSANL 350 (507)
T ss_pred --hHHHhhcCHHHHHHHHhhcHHHHhhhhhhhhccccceeecccCCcccCCCccce
Confidence 12222222334555555566555431 1121 23469999999999988753
No 197
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=80.61 E-value=9.6 Score=36.87 Aligned_cols=47 Identities=19% Similarity=0.290 Sum_probs=37.2
Q ss_pred HHHHHHHHH--hcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCC
Q 019962 188 RCLLHWLEW--EAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSP 234 (333)
Q Consensus 188 r~ll~wl~~--~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~ 234 (333)
..++=|+++ +...++.+|.|.||||-.+.-+-..+|+.-...-.+||
T Consensus 122 ~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SP 170 (264)
T COG2819 122 EQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISP 170 (264)
T ss_pred HhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecc
Confidence 677788873 23458899999999999999998899987777766553
No 198
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=80.07 E-value=7.3 Score=36.43 Aligned_cols=115 Identities=13% Similarity=0.073 Sum_probs=62.0
Q ss_pred cCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCccccc-ccccccc-------CccHHH---HHHHHHhhhh--
Q 019962 198 AGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAVVAF-CEGILKH-------GTAWEA---LREELAAKKV-- 264 (333)
Q Consensus 198 ~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta~~vf-teGvl~~-------~~~w~~---L~~~l~~~~~-- 264 (333)
.++.+|.|++-|||=++|+.+-...| ....+.+-+ |.-++= .-||... ..+=++ ..+.+..+..
T Consensus 54 ~~y~~i~lvAWSmGVw~A~~~l~~~~-~~~aiAING--T~~Pid~~~GIpp~iF~~Tl~~l~ee~~~kF~rrmcg~~~~~ 130 (213)
T PF04301_consen 54 SGYREIYLVAWSMGVWAANRVLQGIP-FKRAIAING--TPYPIDDEYGIPPAIFAGTLENLSEENLQKFNRRMCGDKELL 130 (213)
T ss_pred ccCceEEEEEEeHHHHHHHHHhccCC-cceeEEEEC--CCCCcCCCCCCCHHHHHHHHHhCCHHHHHHHHHHhcCCchhh
Confidence 47899999999999999999865544 223332222 221110 2233321 111122 2222211110
Q ss_pred -------c-CCHHHHHHHHHHhh-ccCCCCCCCCCCCCCeEEEEEecCCccccchhhHHhhhc
Q 019962 265 -------A-MTLEEVRERMRNVL-SLTDVTRFPIPKIPNAVIFVAATVSTVFDYHHEEVLKMD 318 (333)
Q Consensus 265 -------~-lt~~~a~~rl~~~l-~~t~l~nf~~p~dp~~ilvV~g~~D~yVP~~~~~~L~~~ 318 (333)
. =+.++.+++|..+. ..... ..+.....+.+ |-|++|+.+|++.-+.-++.
T Consensus 131 ~~f~~~~~r~~~~elk~EL~~l~~~~~~~-~~~~~~~wd~a--iIg~~D~IFpp~nQ~~~W~~ 190 (213)
T PF04301_consen 131 EKFQSFPPRRSFEELKEELAALYEFIKKN-PPADLFHWDKA--IIGKKDRIFPPENQKRAWQG 190 (213)
T ss_pred HHhhcCCcCCCHHHHHHHHHHHHHHHhcc-CCCCCccccEE--EEcCCCEEeCHHHHHHHHhC
Confidence 1 12467777777765 22211 01122335445 88999999999999988875
No 199
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=77.94 E-value=40 Score=35.03 Aligned_cols=118 Identities=15% Similarity=0.041 Sum_probs=66.4
Q ss_pred cceeEEEeecCCCCCCCceEEEEecCCCChhHHHhhh----hchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhH
Q 019962 101 HNARVAFLAPKCVPPQKMACVVHLAGTGDHTFERRLR----LGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDL 176 (333)
Q Consensus 101 ~~a~~~~~~p~~~~~~~~v~viH~aG~Gd~~~~~r~~----la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~ 176 (333)
..-+|++-+|..|..+ - +...|.|-.+-..... ++ .-+.+||+++-=+ =.|...... ...+...+..-+
T Consensus 15 ~~i~fev~LP~~WNgR-~---~~~GgGG~~G~i~~~~~~~~~~-~~~~~G~A~~~TD-~Gh~~~~~~-~~~~~~~n~~~~ 87 (474)
T PF07519_consen 15 PNIRFEVWLPDNWNGR-F---LQVGGGGFAGGINYADGKASMA-TALARGYATASTD-SGHQGSAGS-DDASFGNNPEAL 87 (474)
T ss_pred ceEEEEEECChhhccC-e---EEECCCeeeCcccccccccccc-hhhhcCeEEEEec-CCCCCCccc-ccccccCCHHHH
Confidence 3678999999999653 2 2333333222111111 22 2335799998844 455443321 111111333333
Q ss_pred HHhhhhhHHHHHHHHHHHHH---hcCCCeeeEeeechhHHHHHHhhhcCCCc
Q 019962 177 LLLGRATIEEARCLLHWLEW---EAGFGKMGVCGLSMGGVHAAMVGSLHPTP 225 (333)
Q Consensus 177 ~~~g~~~i~E~r~ll~wl~~---~~g~~~vgv~G~SMGG~~Asl~A~~~P~~ 225 (333)
.-.|-.++.+...+-..+-+ ......-...|-|-||+.+.+.|-.+|+.
T Consensus 88 ~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~d 139 (474)
T PF07519_consen 88 LDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPED 139 (474)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhh
Confidence 44455566665433333321 23457789999999999999999999974
No 200
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=77.47 E-value=17 Score=36.76 Aligned_cols=35 Identities=20% Similarity=0.179 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHhcCCCeeeEeeechhHHHHHHh
Q 019962 184 IEEARCLLHWLEWEAGFGKMGVCGLSMGGVHAAMV 218 (333)
Q Consensus 184 i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~ 218 (333)
+.|+-+..++|-++.|...|.+.|-|-||.+|.-+
T Consensus 178 L~qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~ 212 (374)
T PF10340_consen 178 LRQLVATYDYLVESEGNKNIILMGDSAGGNLALSF 212 (374)
T ss_pred HHHHHHHHHHHHhccCCCeEEEEecCccHHHHHHH
Confidence 45667777777657899999999999999998765
No 201
>COG2312 Erythromycin esterase homolog [General function prediction only]
Probab=76.64 E-value=3.5 Score=42.02 Aligned_cols=91 Identities=23% Similarity=0.265 Sum_probs=58.2
Q ss_pred HHHhhhhchHHHh-cCccEEEeecccCC-CC--CCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHHhcCC----Cee
Q 019962 132 FERRLRLGGPLLK-ENIATMVLESPFYG-QR--RPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEWEAGF----GKM 203 (333)
Q Consensus 132 ~~~r~~la~pL~~-~Gi~~ill~~Py~G-~R--kP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~~~g~----~~v 203 (333)
|..+.++.+.|++ .|+++|.+|.-++- .+ +=..+....+....|-|.-++--..|.+.|+.||++.+.- .++
T Consensus 61 ~~~k~rm~r~Lvee~Gf~~iA~EA~~~d~~av~~Yv~~~~~d~~~~~~~~~~~~Wr~~~v~~lv~wlr~~na~r~~~~~~ 140 (405)
T COG2312 61 FAFKARMFRALVEELGFRAIAFEADFPDAQAVNRYVRGGGDDLREAMDGFIFWVWRRAEVRDLVEWLREFNAARSAGPQV 140 (405)
T ss_pred HHHHHHHHHHHHHHhCcceEEeccCcHHHHHHHHHHhccCCChHHHHhccchhhhhHHHHHHHHHHHHHHhccCCccccc
Confidence 4444489999998 69999999998871 11 0000111112223333333334456899999999964432 667
Q ss_pred eEeee---chhHHHHHHhhhcC
Q 019962 204 GVCGL---SMGGVHAAMVGSLH 222 (333)
Q Consensus 204 gv~G~---SMGG~~Asl~A~~~ 222 (333)
+..|+ +++|..+++.+...
T Consensus 141 ~f~g~D~~~~n~~~~~~~~~~~ 162 (405)
T COG2312 141 GFYGFDAQMENGSAAALRAYLD 162 (405)
T ss_pred ceeeccccccccchHHHHhhcc
Confidence 78886 78999999988653
No 202
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=75.66 E-value=3.6 Score=36.02 Aligned_cols=35 Identities=26% Similarity=0.161 Sum_probs=29.5
Q ss_pred HHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCCC
Q 019962 189 CLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPT 224 (333)
Q Consensus 189 ~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~ 224 (333)
.++++|+ +.|+..-.|+|.|+|..+|++.|+..+.
T Consensus 15 Gvl~aL~-e~gi~~d~v~GtSaGAi~aa~~a~g~~~ 49 (172)
T cd07198 15 GVAKALR-ERGPLIDIIAGTSAGAIVAALLASGRDL 49 (172)
T ss_pred HHHHHHH-HcCCCCCEEEEECHHHHHHHHHHcCCCH
Confidence 4566666 6899999999999999999999997653
No 203
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=73.79 E-value=8.3 Score=40.09 Aligned_cols=94 Identities=14% Similarity=-0.010 Sum_probs=58.2
Q ss_pred CceEEEEecCC-----CChhHHHhhhhchHHHhcCcc--EEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHH
Q 019962 117 KMACVVHLAGT-----GDHTFERRLRLGGPLLKENIA--TMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARC 189 (333)
Q Consensus 117 ~~v~viH~aG~-----Gd~~~~~r~~la~pL~~~Gi~--~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ 189 (333)
+|-|.+-.+|+ -|.+|+-+..+.+-|+.-||. --++-.||=-+..+.+ .+.-|.+.... +.
T Consensus 103 ~pg~~lRvpgf~s~~~ld~~y~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~------~e~rd~yl~kL------K~ 170 (473)
T KOG2369|consen 103 PPGVKLRVPGFESLDYLDPGYWYWHELIENLVGIGYERGKTLFGAPYDWRLSYHN------SEERDQYLSKL------KK 170 (473)
T ss_pred CCcceeecCCceeeecccchhHHHHHHHHHHHhhCcccCceeeccccchhhccCC------hhHHHHHHHHH------HH
Confidence 44455555666 267787766788889988887 4445567655443322 22233333322 44
Q ss_pred HHHHHHHhcCCCeeeEeeechhHHHHHHhhhcC
Q 019962 190 LLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLH 222 (333)
Q Consensus 190 ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~ 222 (333)
.+..+-+..|.++|.|+++||||-+..-+--..
T Consensus 171 ~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~ 203 (473)
T KOG2369|consen 171 KIETMYKLNGGKKVVLISHSMGGLYVLYFLKWV 203 (473)
T ss_pred HHHHHHHHcCCCceEEEecCCccHHHHHHHhcc
Confidence 444444357889999999999998876654433
No 204
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=73.56 E-value=7.4 Score=42.02 Aligned_cols=44 Identities=20% Similarity=0.361 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHhcCC---CeeeEeeechhHHHHHHhhhcCCCceeee
Q 019962 185 EEARCLLHWLEWEAGF---GKMGVCGLSMGGVHAAMVGSLHPTPVATL 229 (333)
Q Consensus 185 ~E~r~ll~wl~~~~g~---~~vgv~G~SMGG~~Asl~A~~~P~~v~~v 229 (333)
.|--+...||- ++|+ .++++.|.|-||..++.+.-..|+..+++
T Consensus 531 ~Dfia~AeyLv-e~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~av 577 (712)
T KOG2237|consen 531 DDFIACAEYLV-ENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAV 577 (712)
T ss_pred HHHHHHHHHHH-HcCCCCccceeEecccCccchhHHHhccCchHhhhh
Confidence 33345566666 7887 89999999999999888877788754444
No 205
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=72.30 E-value=4.7 Score=41.40 Aligned_cols=67 Identities=19% Similarity=0.303 Sum_probs=47.6
Q ss_pred CChhHHHh-hhhchHHHhcCccEEEeecccC--CCCCCCcccCcccchhhhHHHhhhhhHHHH-HHHHHHHHHhcCCCee
Q 019962 128 GDHTFERR-LRLGGPLLKENIATMVLESPFY--GQRRPLLQRGAKLLCVSDLLLLGRATIEEA-RCLLHWLEWEAGFGKM 203 (333)
Q Consensus 128 Gd~~~~~r-~~la~pL~~~Gi~~ill~~Py~--G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~-r~ll~wl~~~~g~~~v 203 (333)
||.||..- +..+..|.++|+-|+-.+.-=| ..|.|... . .|. |.+-.|-+ +-|..++
T Consensus 268 GDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~rtPe~~-------a-----------~Dl~r~i~~y~~-~w~~~~~ 328 (456)
T COG3946 268 GDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSERTPEQI-------A-----------ADLSRLIRFYAR-RWGAKRV 328 (456)
T ss_pred cCCchhhhhHHHHHHHHHCCCceeeeehhhhhhccCCHHHH-------H-----------HHHHHHHHHHHH-hhCcceE
Confidence 56677653 3589999999999999987633 55555521 1 122 45555555 7899999
Q ss_pred eEeeechhHH
Q 019962 204 GVCGLSMGGV 213 (333)
Q Consensus 204 gv~G~SMGG~ 213 (333)
.++|.|.|.=
T Consensus 329 ~liGySfGAD 338 (456)
T COG3946 329 LLIGYSFGAD 338 (456)
T ss_pred EEEeecccch
Confidence 9999999963
No 206
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=72.01 E-value=20 Score=36.26 Aligned_cols=54 Identities=19% Similarity=0.224 Sum_probs=36.7
Q ss_pred HHHHHHHHHhcCCCeeeEeeechhHHHHHHh----hhcC----CCceeeecccCCCCccccc
Q 019962 188 RCLLHWLEWEAGFGKMGVCGLSMGGVHAAMV----GSLH----PTPVATLPFLSPHSAVVAF 241 (333)
Q Consensus 188 r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~----A~~~----P~~v~~vp~~~~~ta~~vf 241 (333)
..++.+|.+..+..+|.|..+|||.+....+ |... +..+..+.+.+|---..+|
T Consensus 178 e~~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~DVF 239 (377)
T COG4782 178 ERLLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVDVF 239 (377)
T ss_pred HHHHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChhhH
Confidence 6788888855568999999999999988764 3332 3355666665553333333
No 207
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=70.87 E-value=5 Score=39.19 Aligned_cols=34 Identities=29% Similarity=0.277 Sum_probs=29.5
Q ss_pred HHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcC
Q 019962 188 RCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLH 222 (333)
Q Consensus 188 r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~ 222 (333)
-.+++.|+ +.|+..=.|+|.|+|+.++++.|+-.
T Consensus 31 iGvL~aLe-e~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 31 IGVIKALE-EAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHH-HcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 35677777 78999999999999999999999874
No 208
>PRK10279 hypothetical protein; Provisional
Probab=69.65 E-value=5 Score=39.20 Aligned_cols=34 Identities=21% Similarity=0.202 Sum_probs=29.0
Q ss_pred HHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCC
Q 019962 189 CLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHP 223 (333)
Q Consensus 189 ~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P 223 (333)
-++++|+ +.|+..=.|+|.|+|..++++.|+-..
T Consensus 22 GVL~aL~-E~gi~~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 22 GVINALK-KVGIEIDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHHH-HcCCCcCEEEEEcHHHHHHHHHHcCCh
Confidence 4566676 799999999999999999999998653
No 209
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=69.57 E-value=6 Score=34.87 Aligned_cols=34 Identities=38% Similarity=0.370 Sum_probs=28.6
Q ss_pred HHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCC
Q 019962 189 CLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHP 223 (333)
Q Consensus 189 ~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P 223 (333)
.+++.|+ +.|...=.|+|.|.|+.+|+++|+..+
T Consensus 16 Gvl~~L~-e~~~~~d~i~GtSaGai~aa~~a~g~~ 49 (194)
T cd07207 16 GALKALE-EAGILKKRVAGTSAGAITAALLALGYS 49 (194)
T ss_pred HHHHHHH-HcCCCcceEEEECHHHHHHHHHHcCCC
Confidence 5566676 688888999999999999999998654
No 210
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=68.42 E-value=11 Score=40.75 Aligned_cols=104 Identities=15% Similarity=0.259 Sum_probs=59.3
Q ss_pred HHHHHHHHHhcCC---CeeeEeeechhHHHHHHhhhcCCC----ceeeecccCCCCccccccccccccCccHHHHHHHHH
Q 019962 188 RCLLHWLEWEAGF---GKMGVCGLSMGGVHAAMVGSLHPT----PVATLPFLSPHSAVVAFCEGILKHGTAWEALREELA 260 (333)
Q Consensus 188 r~ll~wl~~~~g~---~~vgv~G~SMGG~~Asl~A~~~P~----~v~~vp~~~~~ta~~vfteGvl~~~~~w~~L~~~l~ 260 (333)
-+..++|. ++|+ ++|++.|-|-||-+...++-..|+ .|+-||++-+-+.- ..+..+...+.|+.--.
T Consensus 512 Ia~a~~Lv-~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTM--lD~slPLT~~E~~EWGN--- 585 (682)
T COG1770 512 IAAARHLV-KEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTM--LDPSLPLTVTEWDEWGN--- 585 (682)
T ss_pred HHHHHHHH-HcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhh--cCCCCCCCccchhhhCC---
Confidence 33344444 6676 799999999999999988888887 67777776543220 01111111122211100
Q ss_pred hhhhcCCHHHHHHHHHHhh-ccCCCCCCCC-CCCCCeEEEEEecCCcccc
Q 019962 261 AKKVAMTLEEVRERMRNVL-SLTDVTRFPI-PKIPNAVIFVAATVSTVFD 308 (333)
Q Consensus 261 ~~~~~lt~~~a~~rl~~~l-~~t~l~nf~~-p~dp~~ilvV~g~~D~yVP 308 (333)
-+. ......| ++....|..+ ++. .|++++|.+|-.|.
T Consensus 586 --------P~d-~e~y~yikSYSPYdNV~a~~YP--~ilv~~Gl~D~rV~ 624 (682)
T COG1770 586 --------PLD-PEYYDYIKSYSPYDNVEAQPYP--AILVTTGLNDPRVQ 624 (682)
T ss_pred --------cCC-HHHHHHHhhcCchhccccCCCC--ceEEEccccCCccc
Confidence 001 1223333 5555555444 233 59999999999987
No 211
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=67.37 E-value=8.9 Score=34.34 Aligned_cols=93 Identities=15% Similarity=0.058 Sum_probs=49.4
Q ss_pred ceEEEEecCCCChh-HHHhh-hhchHHHh-cCccEEEee-cccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHH
Q 019962 118 MACVVHLAGTGDHT-FERRL-RLGGPLLK-ENIATMVLE-SPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHW 193 (333)
Q Consensus 118 ~v~viH~aG~Gd~~-~~~r~-~la~pL~~-~Gi~~ill~-~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~w 193 (333)
.+-+|.--||++.. ...-. .+...+.+ -|-..+-+. .+|--.--+. .+..+-...+.+...++..
T Consensus 5 ~v~vi~aRGT~E~~g~~~~g~~~~~~l~~~~g~~~~~~~~V~YpA~~~~~-----------~y~~S~~~G~~~~~~~i~~ 73 (179)
T PF01083_consen 5 DVHVIFARGTGEPPGVGRVGPPFADALQAQPGGTSVAVQGVEYPASLGPN-----------SYGDSVAAGVANLVRLIEE 73 (179)
T ss_dssp SEEEEEE--TTSSTTTCCCHHHHHHHHHHHCTTCEEEEEE--S---SCGG-----------SCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEecCCCCCCCCccccHHHHHHHHhhcCCCeeEEEecCCCCCCCcc-----------cccccHHHHHHHHHHHHHH
Confidence 34467777888542 21111 34555554 353333332 4443332221 1122333456666555555
Q ss_pred HHHhcCCCeeeEeeechhHHHHHHhhhc
Q 019962 194 LEWEAGFGKMGVCGLSMGGVHAAMVGSL 221 (333)
Q Consensus 194 l~~~~g~~~vgv~G~SMGG~~Asl~A~~ 221 (333)
..++-...++.|+|.|.|+.++..+.+.
T Consensus 74 ~~~~CP~~kivl~GYSQGA~V~~~~~~~ 101 (179)
T PF01083_consen 74 YAARCPNTKIVLAGYSQGAMVVGDALSG 101 (179)
T ss_dssp HHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHhCCCCCEEEEecccccHHHHHHHHh
Confidence 4436677899999999999999999877
No 212
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=65.75 E-value=7.4 Score=36.61 Aligned_cols=35 Identities=26% Similarity=0.292 Sum_probs=28.9
Q ss_pred HHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCC
Q 019962 188 RCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHP 223 (333)
Q Consensus 188 r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P 223 (333)
-++.+.++ +.|+.+-.++|+|+|-+.|+.+|...+
T Consensus 70 ~a~~~~l~-~~Gi~p~~~~GhSlGE~aA~~~ag~~~ 104 (298)
T smart00827 70 VALARLWR-SWGVRPDAVVGHSLGEIAAAYVAGVLS 104 (298)
T ss_pred HHHHHHHH-HcCCcccEEEecCHHHHHHHHHhCCCC
Confidence 35556666 789999999999999999998887654
No 213
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=65.45 E-value=9.1 Score=33.40 Aligned_cols=35 Identities=31% Similarity=0.258 Sum_probs=28.8
Q ss_pred HHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCC
Q 019962 188 RCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHP 223 (333)
Q Consensus 188 r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P 223 (333)
-.++++|+ +.|...=.++|.|.|+.+|+++|+...
T Consensus 16 ~Gvl~~L~-~~~~~~d~i~GtSaGal~a~~~a~g~~ 50 (175)
T cd07205 16 IGVLKALE-EAGIPIDIVSGTSAGAIVGALYAAGYS 50 (175)
T ss_pred HHHHHHHH-HcCCCeeEEEEECHHHHHHHHHHcCCC
Confidence 45666777 678888899999999999999997653
No 214
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=64.56 E-value=37 Score=35.11 Aligned_cols=143 Identities=15% Similarity=0.117 Sum_probs=92.1
Q ss_pred cCeEEEeeeeeCCCcccccCCCCccccceeEEEeecCCCCCCCceEEEEecCCCChhHHHhhhhchHHHhcCccEEEeec
Q 019962 75 QTAVLREGVFRTPCDEQLMSALPPESHNARVAFLAPKCVPPQKMACVVHLAGTGDHTFERRLRLGGPLLKENIATMVLES 154 (333)
Q Consensus 75 ~~~~~~~g~F~Sp~~~~~p~~lp~~s~~a~~~~~~p~~~~~~~~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~ 154 (333)
...+.....|.-|.++..|+- .+=+=++.+ .|..-++|+| ++-.|.+.+.--.+..++.- .+=+-+.+|-
T Consensus 27 ~gyRffvl~y~QPvDH~~P~~-----gtF~QRvtL-lHk~~drPtV-~~T~GY~~~~~p~r~Ept~L---ld~NQl~vEh 96 (448)
T PF05576_consen 27 DGYRFFVLRYTQPVDHRHPEK-----GTFQQRVTL-LHKDFDRPTV-LYTEGYNVSTSPRRSEPTQL---LDGNQLSVEH 96 (448)
T ss_pred CceEEEEEeeecCCCCCCCCC-----CceEEEEEE-EEcCCCCCeE-EEecCcccccCccccchhHh---hccceEEEEE
Confidence 355778889999998877543 332222222 2333468864 89888886432122122222 2447788899
Q ss_pred ccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCCC-ceeeecccC
Q 019962 155 PFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPT-PVATLPFLS 233 (333)
Q Consensus 155 Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~-~v~~vp~~~ 233 (333)
=|++.++|....-+.|.-. ++..|.-.+..-++ ..=-++=.=||+|=||-+|..-=.-+|+ ..++||.+|
T Consensus 97 RfF~~SrP~p~DW~~Lti~--------QAA~D~Hri~~A~K-~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVA 167 (448)
T PF05576_consen 97 RFFGPSRPEPADWSYLTIW--------QAASDQHRIVQAFK-PIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVA 167 (448)
T ss_pred eeccCCCCCCCCcccccHh--------HhhHHHHHHHHHHH-hhccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeec
Confidence 9999999987555544222 33445556666666 3323677889999999877777777887 568899999
Q ss_pred CCC
Q 019962 234 PHS 236 (333)
Q Consensus 234 ~~t 236 (333)
|..
T Consensus 168 P~~ 170 (448)
T PF05576_consen 168 PND 170 (448)
T ss_pred ccc
Confidence 854
No 215
>COG3150 Predicted esterase [General function prediction only]
Probab=64.16 E-value=8.8 Score=35.19 Aligned_cols=27 Identities=33% Similarity=0.349 Sum_probs=22.9
Q ss_pred hcCCCeeeEeeechhHHHHHHhhhcCC
Q 019962 197 EAGFGKMGVCGLSMGGVHAAMVGSLHP 223 (333)
Q Consensus 197 ~~g~~~vgv~G~SMGG~~Asl~A~~~P 223 (333)
+.|.+..+|+|.|+||+-|.-++-.+-
T Consensus 55 ~~~~~~p~ivGssLGGY~At~l~~~~G 81 (191)
T COG3150 55 ELGDESPLIVGSSLGGYYATWLGFLCG 81 (191)
T ss_pred HcCCCCceEEeecchHHHHHHHHHHhC
Confidence 456677999999999999999987765
No 216
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=64.11 E-value=4.8 Score=43.08 Aligned_cols=123 Identities=15% Similarity=0.195 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHhcCC---CeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCccccccccccccCccHHHHHHHHH
Q 019962 184 IEEARCLLHWLEWEAGF---GKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAVVAFCEGILKHGTAWEALREELA 260 (333)
Q Consensus 184 i~E~r~ll~wl~~~~g~---~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta~~vfteGvl~~~~~w~~L~~~l~ 260 (333)
+.|-.+...+|- +.|+ +++++-|-|=||-..+.+-+-.|+..+.+.|=-|..--.-|.+ +...-+|-. +
T Consensus 481 fdDf~AVaedLi-~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh~--l~aG~sW~~-----E 552 (648)
T COG1505 481 FDDFIAVAEDLI-KRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYHL--LTAGSSWIA-----E 552 (648)
T ss_pred hHHHHHHHHHHH-HhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhhcc--cccchhhHh-----h
Confidence 455577888888 8898 8999999999999988888899997777665211110000000 000111200 0
Q ss_pred hhhhcCCHHHHHHHHHHhhccCCCCCCCCCCC-CCeEEEEEecCCccccchhhHHhhhccc
Q 019962 261 AKKVAMTLEEVRERMRNVLSLTDVTRFPIPKI-PNAVIFVAATVSTVFDYHHEEVLKMDSQ 320 (333)
Q Consensus 261 ~~~~~lt~~~a~~rl~~~l~~t~l~nf~~p~d-p~~ilvV~g~~D~yVP~~~~~~L~~~~~ 320 (333)
+-.. +.-+..+.+.++....|..+-.. | .+||.++.+|.=|+|.|++++.+.-|
T Consensus 553 YG~P-----d~P~d~~~l~~YSPy~nl~~g~kYP-~~LITTs~~DDRVHPaHarKfaa~L~ 607 (648)
T COG1505 553 YGNP-----DDPEDRAFLLAYSPYHNLKPGQKYP-PTLITTSLHDDRVHPAHARKFAAKLQ 607 (648)
T ss_pred cCCC-----CCHHHHHHHHhcCchhcCCccccCC-CeEEEcccccccccchHHHHHHHHHH
Confidence 0000 11122233335555656666332 3 48899999999999999998776544
No 217
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=62.06 E-value=27 Score=36.04 Aligned_cols=115 Identities=12% Similarity=0.071 Sum_probs=63.2
Q ss_pred ccccceeEEEeecCCCCCC-Cce-EEEEecCCC-ChhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhh
Q 019962 98 PESHNARVAFLAPKCVPPQ-KMA-CVVHLAGTG-DHTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVS 174 (333)
Q Consensus 98 ~~s~~a~~~~~~p~~~~~~-~~v-~viH~aG~G-d~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vs 174 (333)
..-+.-+.+++.|+.-... .|| +.|||.|.- +++-.+ .-....-....-.||+.+.-|.= -+-+ ..+.-
T Consensus 92 ~sEDCLylNV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~~-~~~~~~~~~~~~~VVvVt~~YRL--G~lG-F~st~---- 163 (545)
T KOG1516|consen 92 GSEDCLYLNVYTPQGCSESKLPVMVYIHGGGFQFGSASSF-EIISPAYVLLLKDVVVVTINYRL--GPLG-FLSTG---- 163 (545)
T ss_pred CcCCCceEEEeccCCCccCCCCEEEEEeCCceeeccccch-hhcCchhccccCCEEEEEecccc--eece-eeecC----
Confidence 3456778999999874321 565 466755443 332111 11222222233457777666650 0111 00000
Q ss_pred hHHHhhhhhHHHHHHHHHHHHHhc---C--CCeeeEeeechhHHHHHHhhh
Q 019962 175 DLLLLGRATIEEARCLLHWLEWEA---G--FGKMGVCGLSMGGVHAAMVGS 220 (333)
Q Consensus 175 d~~~~g~~~i~E~r~ll~wl~~~~---g--~~~vgv~G~SMGG~~Asl~A~ 220 (333)
|--..|-..+.|....++|+++.- | -.+|-|.|.|-||..++++..
T Consensus 164 d~~~~gN~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~ 214 (545)
T KOG1516|consen 164 DSAAPGNLGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTL 214 (545)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhc
Confidence 001134445567788899997421 2 389999999999999988765
No 218
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=59.92 E-value=18 Score=32.03 Aligned_cols=42 Identities=26% Similarity=0.271 Sum_probs=32.7
Q ss_pred CceEEEEecCCCCh--hHHHhhhhchHHHhcCccEEEeecccCCCC
Q 019962 117 KMACVVHLAGTGDH--TFERRLRLGGPLLKENIATMVLESPFYGQR 160 (333)
Q Consensus 117 ~~v~viH~aG~Gd~--~~~~r~~la~pL~~~Gi~~ill~~Py~G~R 160 (333)
.|++++| |..|. .+..-.+++..|.++|..+.++.+|.-|-.
T Consensus 145 ~P~li~h--G~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~ 188 (213)
T PF00326_consen 145 PPVLIIH--GENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHG 188 (213)
T ss_dssp SEEEEEE--ETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSS
T ss_pred CCEEEEc--cCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCC
Confidence 6777888 77776 456656799999999999999999976663
No 219
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=59.47 E-value=11 Score=36.18 Aligned_cols=33 Identities=27% Similarity=0.335 Sum_probs=28.3
Q ss_pred HHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcC
Q 019962 189 CLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLH 222 (333)
Q Consensus 189 ~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~ 222 (333)
.+++.|+ +.|+..=.|+|.|||..++++.|+.+
T Consensus 27 GVL~aLe-E~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 27 GILQALE-EAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHH-HcCCCccEEEEECHHHHHHHHHHcCC
Confidence 4556666 78999999999999999999999864
No 220
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=59.44 E-value=11 Score=35.62 Aligned_cols=35 Identities=23% Similarity=0.115 Sum_probs=28.2
Q ss_pred HHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCC
Q 019962 188 RCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHP 223 (333)
Q Consensus 188 r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P 223 (333)
-++.+.++ +.|+.|..++|+|+|=+.|+-+|+...
T Consensus 64 ~al~~~l~-~~g~~P~~v~GhS~GE~aAa~~aG~~s 98 (295)
T TIGR03131 64 VAAWRALL-ALLPRPSAVAGYSVGEYAAAVVAGVLT 98 (295)
T ss_pred HHHHHHHH-hcCCCCcEEeecCHHHHHHHHHhCCCC
Confidence 34555555 689999999999999999999887654
No 221
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=59.09 E-value=9.5 Score=36.72 Aligned_cols=35 Identities=23% Similarity=0.217 Sum_probs=28.8
Q ss_pred HHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCC
Q 019962 188 RCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHP 223 (333)
Q Consensus 188 r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P 223 (333)
-++.+.++ +.|+.|-.++|+|||=+.|+-+|....
T Consensus 72 ~al~~~l~-~~Gi~P~~v~GhSlGE~aA~~aaG~ls 106 (318)
T PF00698_consen 72 VALARLLR-SWGIKPDAVIGHSLGEYAALVAAGALS 106 (318)
T ss_dssp HHHHHHHH-HTTHCESEEEESTTHHHHHHHHTTSSS
T ss_pred hhhhhhhc-ccccccceeeccchhhHHHHHHCCccc
Confidence 44566777 889999999999999999988877653
No 222
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=58.81 E-value=11 Score=36.27 Aligned_cols=38 Identities=29% Similarity=0.267 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCC
Q 019962 184 IEEARCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHP 223 (333)
Q Consensus 184 i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P 223 (333)
+..+-+ ++-|+ +.|+.+-.|+|.|||..+|++.|+-..
T Consensus 24 ~~hiGV-l~aL~-e~gi~~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 24 AAHIGV-LKALE-EAGIPIDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHH-HHHHH-HcCCCccEEEecCHHHHHHHHHHcCCC
Confidence 344333 44455 689999999999999999999998543
No 223
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=58.11 E-value=19 Score=32.92 Aligned_cols=38 Identities=29% Similarity=0.431 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCC
Q 019962 184 IEEARCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHP 223 (333)
Q Consensus 184 i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P 223 (333)
+.++- +++.|+ +.|+..=.++|.|+|+.+|+++|+..+
T Consensus 11 ~~~~G-vl~aL~-e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 11 AYQAG-VLKALA-EAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHH-HHHHHH-HcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 44444 445555 679988899999999999999999886
No 224
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=57.46 E-value=24 Score=30.99 Aligned_cols=39 Identities=26% Similarity=0.261 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCC
Q 019962 183 TIEEARCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHP 223 (333)
Q Consensus 183 ~i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P 223 (333)
.+..+-.+ +.|+ +.|+..=.++|.|.|+.+|+++|+..+
T Consensus 12 G~~~~Gvl-~~L~-e~g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 12 GWAHIGVL-RALE-EEGIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHHHH-HHHH-HCCCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 45554444 4555 678888899999999999999998765
No 225
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=56.46 E-value=22 Score=32.82 Aligned_cols=38 Identities=21% Similarity=0.212 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCC
Q 019962 184 IEEARCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHP 223 (333)
Q Consensus 184 i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P 223 (333)
+..+-. ++.|+ +.|+..=.++|.|.|+.+|+++|+-.+
T Consensus 13 ~~~~Gv-L~aL~-e~gi~~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 13 YAHLGF-LAALL-EMGLEPSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred HHHHHH-HHHHH-HcCCCceEEEEeCHHHHHHHHHHcCCC
Confidence 444444 44555 578888899999999999999998654
No 226
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=55.00 E-value=6.9 Score=39.18 Aligned_cols=37 Identities=19% Similarity=0.177 Sum_probs=31.0
Q ss_pred CeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCc
Q 019962 201 GKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSA 237 (333)
Q Consensus 201 ~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta 237 (333)
.++.|+|+|.||+++....+.+-+-...+.+=+|+.+
T Consensus 241 s~~aViGHSFGgAT~i~~ss~~t~FrcaI~lD~WM~P 277 (399)
T KOG3847|consen 241 SQAAVIGHSFGGATSIASSSSHTDFRCAIALDAWMFP 277 (399)
T ss_pred hhhhheeccccchhhhhhhccccceeeeeeeeeeecc
Confidence 5789999999999999998888877777777677766
No 227
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=54.45 E-value=15 Score=34.31 Aligned_cols=34 Identities=24% Similarity=0.194 Sum_probs=26.6
Q ss_pred HHHHHHHHhcC-CCeeeEeeechhHHHHHHhhhcCC
Q 019962 189 CLLHWLEWEAG-FGKMGVCGLSMGGVHAAMVGSLHP 223 (333)
Q Consensus 189 ~ll~wl~~~~g-~~~vgv~G~SMGG~~Asl~A~~~P 223 (333)
++.+.++ +.| +.+-.++|+|+|=+.|+-+|...+
T Consensus 71 al~~~l~-~~g~i~p~~v~GhS~GE~aAa~~aG~ls 105 (290)
T TIGR00128 71 ILYLKLK-EQGGLKPDFAAGHSLGEYSALVAAGALD 105 (290)
T ss_pred HHHHHHH-HcCCCCCCEEeecCHHHHHHHHHhCCCC
Confidence 3444444 566 999999999999999998887654
No 228
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=53.42 E-value=1.3e+02 Score=31.75 Aligned_cols=37 Identities=16% Similarity=0.220 Sum_probs=27.4
Q ss_pred hhHHHHHHHHHHHHH---hcC--CCeeeEeeechhHHHHHHh
Q 019962 182 ATIEEARCLLHWLEW---EAG--FGKMGVCGLSMGGVHAAMV 218 (333)
Q Consensus 182 ~~i~E~r~ll~wl~~---~~g--~~~vgv~G~SMGG~~Asl~ 218 (333)
..+.|....+.|.++ +.| -+.|-|.|.|-|++.++-+
T Consensus 156 ~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~L 197 (491)
T COG2272 156 LGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTL 197 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHh
Confidence 467788889999973 223 2789999999998765443
No 229
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=51.86 E-value=43 Score=33.39 Aligned_cols=37 Identities=14% Similarity=0.156 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCC
Q 019962 185 EEARCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHP 223 (333)
Q Consensus 185 ~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P 223 (333)
.-+-++..++ +.|..+=.|+|.|.|..+|+++|+.-+
T Consensus 82 ~h~GVlkaL~--e~gl~p~~i~GsSaGAivaa~~~~~t~ 118 (323)
T cd07231 82 FHVGVVRTLV--EHQLLPRVIAGSSVGSIVCAIIATRTD 118 (323)
T ss_pred HHHHHHHHHH--HcCCCCCEEEEECHHHHHHHHHHcCCH
Confidence 3334555555 479888889999999999999988433
No 230
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=51.13 E-value=28 Score=32.60 Aligned_cols=39 Identities=33% Similarity=0.204 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHhcCCC-eeeEeeechhHHHHHHhhhcCCC
Q 019962 184 IEEARCLLHWLEWEAGFG-KMGVCGLSMGGVHAAMVGSLHPT 224 (333)
Q Consensus 184 i~E~r~ll~wl~~~~g~~-~vgv~G~SMGG~~Asl~A~~~P~ 224 (333)
+..+-+|-.+. +.|.. .=.|+|.|.|+.+|+++++..+.
T Consensus 11 ~~~~Gvl~al~--e~~~~~fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 11 AYTAGVLDAFL--EAGIRPFDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred HHHHHHHHHHH--HcCCCCCCEEEEECHHHHhHHHHHhCCcc
Confidence 44444444444 57887 56999999999999999887543
No 231
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=51.12 E-value=13 Score=38.08 Aligned_cols=85 Identities=16% Similarity=0.177 Sum_probs=50.5
Q ss_pred eEEEEecCCCChhHHHhhhhchHHHhc--CccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHH
Q 019962 119 ACVVHLAGTGDHTFERRLRLGGPLLKE--NIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEW 196 (333)
Q Consensus 119 v~viH~aG~Gd~~~~~r~~la~pL~~~--Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~ 196 (333)
++++||.=.+|..||.+ -+.+..+. +. +++..++.|. -. .++.+...||-.+-.|.+..+.|.
T Consensus 83 vVlthGi~~~~~~~~~~--~~~~~~kk~p~~--~iv~~g~~~~---~~------~T~~Gv~~lG~Rla~~~~e~~~~~-- 147 (405)
T KOG4372|consen 83 VVLTHGLHGADMEYWKE--KIEQMTKKMPDK--LIVVRGKMNN---MC------QTFDGVDVLGERLAEEVKETLYDY-- 147 (405)
T ss_pred EEeccccccccHHHHHH--HHHhhhcCCCcc--eEeeeccccc---hh------hccccceeeecccHHHHhhhhhcc--
Confidence 35677654468888874 34444432 33 4444555422 12 333334455666555544444444
Q ss_pred hcCCCeeeEeeechhHHHHHHhhh
Q 019962 197 EAGFGKMGVCGLSMGGVHAAMVGS 220 (333)
Q Consensus 197 ~~g~~~vgv~G~SMGG~~Asl~A~ 220 (333)
.+++|-.+|+|+||.+|..+-+
T Consensus 148 --si~kISfvghSLGGLvar~AIg 169 (405)
T KOG4372|consen 148 --SIEKISFVGHSLGGLVARYAIG 169 (405)
T ss_pred --ccceeeeeeeecCCeeeeEEEE
Confidence 2799999999999999987643
No 232
>PF03283 PAE: Pectinacetylesterase
Probab=50.35 E-value=20 Score=35.89 Aligned_cols=36 Identities=28% Similarity=0.389 Sum_probs=28.2
Q ss_pred HHHHHHHHHhcCC---CeeeEeeechhHHHHHHh----hhcCCC
Q 019962 188 RCLLHWLEWEAGF---GKMGVCGLSMGGVHAAMV----GSLHPT 224 (333)
Q Consensus 188 r~ll~wl~~~~g~---~~vgv~G~SMGG~~Asl~----A~~~P~ 224 (333)
+++++||. +.|. ++|.|+|-|-||.-|.+- +...|.
T Consensus 141 ~avl~~l~-~~gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~ 183 (361)
T PF03283_consen 141 RAVLDDLL-SNGLPNAKQVLLTGCSAGGLGAILHADYVRDRLPS 183 (361)
T ss_pred HHHHHHHH-HhcCcccceEEEeccChHHHHHHHHHHHHHHHhcc
Confidence 78999998 4443 899999999999877774 445664
No 233
>PLN02606 palmitoyl-protein thioesterase
Probab=46.16 E-value=98 Score=30.67 Aligned_cols=101 Identities=15% Similarity=0.116 Sum_probs=54.1
Q ss_pred CCCceEEEEecCCCChhHHHh-hhhchHHHh-cCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHH
Q 019962 115 PQKMACVVHLAGTGDHTFERR-LRLGGPLLK-ENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLH 192 (333)
Q Consensus 115 ~~~~v~viH~aG~Gd~~~~~r-~~la~pL~~-~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~ 192 (333)
...|+++.| |-||+.-... ..+.+-+.+ .|+-+..++. |. +...+...++- .-|.++..-+.
T Consensus 25 ~~~PvViwH--GlgD~~~~~~~~~~~~~i~~~~~~pg~~v~i---g~----~~~~s~~~~~~-------~Qv~~vce~l~ 88 (306)
T PLN02606 25 LSVPFVLFH--GFGGECSNGKVSNLTQFLINHSGYPGTCVEI---GN----GVQDSLFMPLR-------QQASIACEKIK 88 (306)
T ss_pred CCCCEEEEC--CCCcccCCchHHHHHHHHHhCCCCCeEEEEE---CC----CcccccccCHH-------HHHHHHHHHHh
Confidence 347888888 6665543221 134444432 3666555552 32 11122223331 22333333333
Q ss_pred HHHHhcCCCeeeEeeechhHHHHHHhhhcCCC--ceeeecccC
Q 019962 193 WLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPT--PVATLPFLS 233 (333)
Q Consensus 193 wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~--~v~~vp~~~ 233 (333)
-.. ++. .-+.++|+|=||-++=.++-..|. +|..++-++
T Consensus 89 ~~~-~L~-~G~naIGfSQGglflRa~ierc~~~p~V~nlISlg 129 (306)
T PLN02606 89 QMK-ELS-EGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLG 129 (306)
T ss_pred cch-hhc-CceEEEEEcchhHHHHHHHHHCCCCCCcceEEEec
Confidence 333 333 348999999999999888877655 466665555
No 234
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=46.16 E-value=26 Score=32.66 Aligned_cols=35 Identities=31% Similarity=0.240 Sum_probs=28.4
Q ss_pred HHHHHHHHHhcCCC--eeeEeeechhHHHHHHhhhcCC
Q 019962 188 RCLLHWLEWEAGFG--KMGVCGLSMGGVHAAMVGSLHP 223 (333)
Q Consensus 188 r~ll~wl~~~~g~~--~vgv~G~SMGG~~Asl~A~~~P 223 (333)
--++++|+ +.|+. .-.++|.|.|..+|++.|+..+
T Consensus 15 ~GVl~~L~-e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 15 LGVLSLLI-EAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHH-HcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 35667777 78886 4589999999999999998765
No 235
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=45.15 E-value=39 Score=36.06 Aligned_cols=43 Identities=19% Similarity=0.248 Sum_probs=33.7
Q ss_pred CCceEEEEecCCCChh--HHHhhhhchHHHhcCccEEEeecccCCCC
Q 019962 116 QKMACVVHLAGTGDHT--FERRLRLGGPLLKENIATMVLESPFYGQR 160 (333)
Q Consensus 116 ~~~v~viH~aG~Gd~~--~~~r~~la~pL~~~Gi~~ill~~Py~G~R 160 (333)
..|+++|| |.-|.- ...-.+|...|-+.|+.+-+..+|-.|-.
T Consensus 551 ~~P~LliH--G~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~ 595 (620)
T COG1506 551 KTPLLLIH--GEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHG 595 (620)
T ss_pred CCCEEEEe--ecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcC
Confidence 36788899 888773 44555789999999999999999876665
No 236
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=43.79 E-value=1.5e+02 Score=28.81 Aligned_cols=110 Identities=15% Similarity=0.120 Sum_probs=52.4
Q ss_pred cceeEEEeecCCCCCCCceEEEEecCCCChhHH-HhhhhchHHH-h---------------cCccEEEeeccc-CCCCCC
Q 019962 101 HNARVAFLAPKCVPPQKMACVVHLAGTGDHTFE-RRLRLGGPLL-K---------------ENIATMVLESPF-YGQRRP 162 (333)
Q Consensus 101 ~~a~~~~~~p~~~~~~~~v~viH~aG~Gd~~~~-~r~~la~pL~-~---------------~Gi~~ill~~Py-~G~RkP 162 (333)
..-.+-++..+.-+.++|+++-.-.|+|-|+-+ ....+ .|+. + +-.+++.+|.|- -|-+..
T Consensus 24 ~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~-GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~PvGtGfS~~ 102 (415)
T PF00450_consen 24 AHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGEN-GPFRINPDGPYTLEDNPYSWNKFANLLFIDQPVGTGFSYG 102 (415)
T ss_dssp EEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTT-SSEEEETTSTSEEEE-TT-GGGTSEEEEE--STTSTT-EE
T ss_pred cEEEEEEEEeCCCCCCccEEEEecCCceecccccccccc-CceEEeecccccccccccccccccceEEEeecCceEEeec
Confidence 344444455555445688876666788977643 22111 1111 1 124566667663 344422
Q ss_pred CcccCcccchhhhHHHhhhhhHHH--HHHHHHHHHH--hcCCCeeeEeeechhHHHHHHhhh
Q 019962 163 LLQRGAKLLCVSDLLLLGRATIEE--ARCLLHWLEW--EAGFGKMGVCGLSMGGVHAAMVGS 220 (333)
Q Consensus 163 ~~q~~s~l~~vsd~~~~g~~~i~E--~r~ll~wl~~--~~g~~~vgv~G~SMGG~~Asl~A~ 220 (333)
..... ...+...+++ .+.|..|+.. +....++.|+|-|-||+....+|.
T Consensus 103 ~~~~~---------~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~ 155 (415)
T PF00450_consen 103 NDPSD---------YVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALAS 155 (415)
T ss_dssp SSGGG---------GS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHH
T ss_pred ccccc---------ccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHH
Confidence 22110 0111111111 2556666662 122359999999999999877765
No 237
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=43.75 E-value=2.7e+02 Score=27.44 Aligned_cols=90 Identities=20% Similarity=0.185 Sum_probs=51.7
Q ss_pred CceEEEEecCCCChhHHH-hhhhchHHHh-cCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHH
Q 019962 117 KMACVVHLAGTGDHTFER-RLRLGGPLLK-ENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWL 194 (333)
Q Consensus 117 ~~v~viH~aG~Gd~~~~~-r~~la~pL~~-~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl 194 (333)
.|+++.| |-||+.+.. ...+.+.+.+ .|..+.-+|. |.. -..+.+...- ..+..++..+.-+
T Consensus 24 ~P~ii~H--Gigd~c~~~~~~~~~q~l~~~~g~~v~~lei---g~g----~~~s~l~pl~-------~Qv~~~ce~v~~m 87 (296)
T KOG2541|consen 24 VPVIVWH--GIGDSCSSLSMANLTQLLEELPGSPVYCLEI---GDG----IKDSSLMPLW-------EQVDVACEKVKQM 87 (296)
T ss_pred CCEEEEe--ccCcccccchHHHHHHHHHhCCCCeeEEEEe---cCC----cchhhhccHH-------HHHHHHHHHHhcc
Confidence 7888888 777776542 2245555666 4887777765 332 1122222221 1223334444433
Q ss_pred HHhcCCCeeeEeeechhHHHHHHhhhcCCC
Q 019962 195 EWEAGFGKMGVCGLSMGGVHAAMVGSLHPT 224 (333)
Q Consensus 195 ~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~ 224 (333)
. ++ -.-..++|.|=||-+|=.++...|.
T Consensus 88 ~-~l-sqGynivg~SQGglv~Raliq~cd~ 115 (296)
T KOG2541|consen 88 P-EL-SQGYNIVGYSQGGLVARALIQFCDN 115 (296)
T ss_pred h-hc-cCceEEEEEccccHHHHHHHHhCCC
Confidence 3 11 2557899999999999888765443
No 238
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=43.69 E-value=21 Score=34.33 Aligned_cols=37 Identities=24% Similarity=0.390 Sum_probs=24.2
Q ss_pred hHHHHHHHHHHHHHhcCCCeee-----EeeechhHHHHHHhhhc
Q 019962 183 TIEEARCLLHWLEWEAGFGKMG-----VCGLSMGGVHAAMVGSL 221 (333)
Q Consensus 183 ~i~E~r~ll~wl~~~~g~~~vg-----v~G~SMGG~~Asl~A~~ 221 (333)
.+..+..|. .|+++.| .+++ |+|-|.||.+|+++|..
T Consensus 20 G~~~~~vL~-~Le~~~~-~~i~~~fDli~GTStGgiiA~~la~~ 61 (308)
T cd07211 20 GVVALEILR-KIEKLTG-KPIHELFDYICGVSTGAILAFLLGLK 61 (308)
T ss_pred HHHHHHHHH-HHHHHhC-CCchhhcCEEEecChhHHHHHHHhcc
Confidence 344444444 4542334 3443 99999999999999873
No 239
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=43.49 E-value=31 Score=35.29 Aligned_cols=40 Identities=20% Similarity=0.162 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCCCc
Q 019962 184 IEEARCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPTP 225 (333)
Q Consensus 184 i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~ 225 (333)
+..+-++.... +.|+.+=.|+|.|.|+.+|+++|+..++.
T Consensus 86 ~~hiGVLkaL~--E~gl~p~vIsGTSaGAivAal~as~~~ee 125 (421)
T cd07230 86 MFHIGVLKALF--EANLLPRIISGSSAGSIVAAILCTHTDEE 125 (421)
T ss_pred HHHHHHHHHHH--HcCCCCCEEEEECHHHHHHHHHHcCCHHH
Confidence 44445544444 58888889999999999999999966543
No 240
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=42.64 E-value=43 Score=32.70 Aligned_cols=34 Identities=24% Similarity=0.106 Sum_probs=24.1
Q ss_pred HHHHHHHHhcCCC----eeeEeeechhHHHHHHhhhcC
Q 019962 189 CLLHWLEWEAGFG----KMGVCGLSMGGVHAAMVGSLH 222 (333)
Q Consensus 189 ~ll~wl~~~~g~~----~vgv~G~SMGG~~Asl~A~~~ 222 (333)
.++..+++..|.. -=.|+|-|+||.+|+++|..+
T Consensus 16 ~vL~~le~~~g~~i~~~fD~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 16 QMLIAIEKALGRPIRELFDWIAGTSTGGILALALLHGK 53 (312)
T ss_pred HHHHHHHHHhCCCchhhccEEEeeChHHHHHHHHHcCC
Confidence 3456666334643 226999999999999999744
No 241
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=42.56 E-value=1.2e+02 Score=31.04 Aligned_cols=47 Identities=19% Similarity=0.300 Sum_probs=30.5
Q ss_pred cCCCCCCCceEEEEecCCCChhHHHhh-hhchHHHhcCcc--EEEeecccC
Q 019962 110 PKCVPPQKMACVVHLAGTGDHTFERRL-RLGGPLLKENIA--TMVLESPFY 157 (333)
Q Consensus 110 p~~~~~~~~v~viH~aG~Gd~~~~~r~-~la~pL~~~Gi~--~ill~~Py~ 157 (333)
|++|.+++--+ +--.|.|..|+..-. .++....-.|.. .++++-||+
T Consensus 212 p~~~~pE~~~I-lvs~GGG~dG~eLi~~~l~A~~~l~~l~~~~~ivtGP~M 261 (400)
T COG4671 212 PPHEAPEGFDI-LVSVGGGADGAELIETALAAAQLLAGLNHKWLIVTGPFM 261 (400)
T ss_pred CCcCCCccceE-EEecCCChhhHHHHHHHHHHhhhCCCCCcceEEEeCCCC
Confidence 55555544433 455688888887655 454444445666 899999999
No 242
>COG0548 ArgB Acetylglutamate kinase [Amino acid transport and metabolism]
Probab=40.29 E-value=76 Score=30.75 Aligned_cols=21 Identities=19% Similarity=0.406 Sum_probs=19.1
Q ss_pred HHHHHHHHHhcCCCeeeEeeec
Q 019962 188 RCLLHWLEWEAGFGKMGVCGLS 209 (333)
Q Consensus 188 r~ll~wl~~~~g~~~vgv~G~S 209 (333)
+.+..++. +.|...+|++|.+
T Consensus 85 k~iva~l~-~~g~~avGlsg~D 105 (265)
T COG0548 85 KEIVARLS-KHGGQAVGLSGVD 105 (265)
T ss_pred HHHHHHHH-HhCCcceeeeecC
Confidence 78899998 8899999999999
No 243
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=39.96 E-value=1.1e+02 Score=32.27 Aligned_cols=36 Identities=33% Similarity=0.525 Sum_probs=28.8
Q ss_pred HHHHHHHHHhcCC--CeeeEeeechhHHHHHHhhh-cCCC
Q 019962 188 RCLLHWLEWEAGF--GKMGVCGLSMGGVHAAMVGS-LHPT 224 (333)
Q Consensus 188 r~ll~wl~~~~g~--~~vgv~G~SMGG~~Asl~A~-~~P~ 224 (333)
+.+-+.|+ .+|+ ..+.+.|+|||-+=|.--++ ..|+
T Consensus 343 ~~I~~~L~-~LgF~~~qLILSGlSMGTfgAlYYga~l~P~ 381 (511)
T TIGR03712 343 NVIQEKLD-YLGFDHDQLILSGLSMGTFGALYYGAKLSPH 381 (511)
T ss_pred HHHHHHHH-HhCCCHHHeeeccccccchhhhhhcccCCCc
Confidence 56666776 7776 88999999999999988876 4565
No 244
>PRK14058 acetylglutamate/acetylaminoadipate kinase; Provisional
Probab=38.87 E-value=74 Score=30.19 Aligned_cols=23 Identities=26% Similarity=0.489 Sum_probs=18.7
Q ss_pred HHHHHHHHHHhcCCCeeeEeeech
Q 019962 187 ARCLLHWLEWEAGFGKMGVCGLSM 210 (333)
Q Consensus 187 ~r~ll~wl~~~~g~~~vgv~G~SM 210 (333)
...+++.|. +.|+..+++.|.+.
T Consensus 82 n~~lv~~L~-~~Gv~a~~l~~~~~ 104 (268)
T PRK14058 82 NKQLVERLQ-SLGVNAVGLSGLDG 104 (268)
T ss_pred HHHHHHHHH-hCCCCccccCcccC
Confidence 356677887 78999999999885
No 245
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=38.76 E-value=22 Score=28.82 Aligned_cols=26 Identities=12% Similarity=0.212 Sum_probs=23.6
Q ss_pred CeEEEEEecCCccccchhhHHhhhcc
Q 019962 294 NAVIFVAATVSTVFDYHHEEVLKMDS 319 (333)
Q Consensus 294 ~~ilvV~g~~D~yVP~~~~~~L~~~~ 319 (333)
.++|+|++++|-..|.+.++.+.++-
T Consensus 35 ~piL~l~~~~Dp~TP~~~a~~~~~~l 60 (103)
T PF08386_consen 35 PPILVLGGTHDPVTPYEGARAMAARL 60 (103)
T ss_pred CCEEEEecCcCCCCcHHHHHHHHHHC
Confidence 47999999999999999999998864
No 246
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=37.64 E-value=60 Score=29.40 Aligned_cols=47 Identities=15% Similarity=0.107 Sum_probs=34.7
Q ss_pred HHHHHHHHHHhc-CCCeeeEeeechhHHHHHHhhhcCCCceeeecccC
Q 019962 187 ARCLLHWLEWEA-GFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLS 233 (333)
Q Consensus 187 ~r~ll~wl~~~~-g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~ 233 (333)
.+.+++=|+... +-.++.++|+|.|..++..++...+-.+..+.+++
T Consensus 94 L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~G 141 (177)
T PF06259_consen 94 LARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVG 141 (177)
T ss_pred HHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEEC
Confidence 355555555333 45799999999999999999988666666666665
No 247
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=37.57 E-value=32 Score=34.52 Aligned_cols=46 Identities=15% Similarity=0.065 Sum_probs=31.2
Q ss_pred HHHHHHHHH-hcCCCeeeEeeechhHHHHHHhhhcCC-----CceeeecccC
Q 019962 188 RCLLHWLEW-EAGFGKMGVCGLSMGGVHAAMVGSLHP-----TPVATLPFLS 233 (333)
Q Consensus 188 r~ll~wl~~-~~g~~~vgv~G~SMGG~~Asl~A~~~P-----~~v~~vp~~~ 233 (333)
+.|.+.|.+ .+|..||.++|+|||+++---.--.-+ ..|..+.+++
T Consensus 206 ~~LA~~L~~~~~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~G 257 (345)
T PF05277_consen 206 KVLADALLSRNQGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMG 257 (345)
T ss_pred HHHHHHHHHhcCCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEec
Confidence 566677764 247789999999999988655432222 2466777775
No 248
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=35.84 E-value=44 Score=28.94 Aligned_cols=29 Identities=31% Similarity=0.233 Sum_probs=23.0
Q ss_pred HHHHHHHhcCC--CeeeEeeechhHHHHHHhh
Q 019962 190 LLHWLEWEAGF--GKMGVCGLSMGGVHAAMVG 219 (333)
Q Consensus 190 ll~wl~~~~g~--~~vgv~G~SMGG~~Asl~A 219 (333)
+++.|+ +.|. ..-.++|.|.|+.+|++++
T Consensus 16 vl~~l~-~~~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 16 VLSALA-ERGLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHH-HhCCccCCCEEEEEcHHHHHHHHHh
Confidence 344444 5677 7789999999999999998
No 249
>PLN02633 palmitoyl protein thioesterase family protein
Probab=34.61 E-value=2.2e+02 Score=28.33 Aligned_cols=101 Identities=18% Similarity=0.147 Sum_probs=57.4
Q ss_pred CCCceEEEEecCCCChhHHHhh-hhchHHHh-cCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHH
Q 019962 115 PQKMACVVHLAGTGDHTFERRL-RLGGPLLK-ENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLH 192 (333)
Q Consensus 115 ~~~~v~viH~aG~Gd~~~~~r~-~la~pL~~-~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~ 192 (333)
+..|+++-| |-||+.-..-- .++.-+.+ .|+-+..++. |.. ...+.+.++- .-|+++..-+.
T Consensus 24 ~~~P~ViwH--G~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~----~~~s~~~~~~-------~Qve~vce~l~ 87 (314)
T PLN02633 24 VSVPFIMLH--GIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNG----VGDSWLMPLT-------QQAEIACEKVK 87 (314)
T ss_pred CCCCeEEec--CCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCC----ccccceeCHH-------HHHHHHHHHHh
Confidence 457877777 88887543211 35555544 4777666555 444 1122233331 12333333333
Q ss_pred HHHHhcCCCeeeEeeechhHHHHHHhhhcCCC--ceeeecccC
Q 019962 193 WLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPT--PVATLPFLS 233 (333)
Q Consensus 193 wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~--~v~~vp~~~ 233 (333)
-.. ++. .-+.++|+|=||-++=.++-..|. +|..++-++
T Consensus 88 ~~~-~l~-~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlg 128 (314)
T PLN02633 88 QMK-ELS-QGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLA 128 (314)
T ss_pred hch-hhh-CcEEEEEEccchHHHHHHHHHCCCCCCcceEEEec
Confidence 333 333 349999999999999888877664 566665555
No 250
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=34.35 E-value=61 Score=33.04 Aligned_cols=39 Identities=18% Similarity=0.106 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCCC
Q 019962 184 IEEARCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPT 224 (333)
Q Consensus 184 i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~ 224 (333)
+..+-++...+ +.|..+=.|+|.|.|+.+|+++|+..++
T Consensus 80 ~~h~GVlkaL~--e~gllp~iI~GtSAGAivaalla~~t~~ 118 (407)
T cd07232 80 YYHFGVVKALL--DADLLPNVISGTSGGSLVAALLCTRTDE 118 (407)
T ss_pred HHHHHHHHHHH--hCCCCCCEEEEECHHHHHHHHHHcCCHH
Confidence 33444444444 5788888899999999999999996554
No 251
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=33.89 E-value=38 Score=34.53 Aligned_cols=33 Identities=24% Similarity=0.216 Sum_probs=26.8
Q ss_pred HHHHHHhcCCCeeeEeeechhHHHHHHhhhcCCC
Q 019962 191 LHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPT 224 (333)
Q Consensus 191 l~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~ 224 (333)
+.-|+ +.|+.+=.|+|-|+|..+|+++|+..++
T Consensus 102 ~kaL~-e~gl~p~~i~GtS~Gaivaa~~a~~~~~ 134 (391)
T cd07229 102 VKALW-LRGLLPRIITGTATGALIAALVGVHTDE 134 (391)
T ss_pred HHHHH-HcCCCCceEEEecHHHHHHHHHHcCCHH
Confidence 34444 6899888999999999999999995443
No 252
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=33.80 E-value=44 Score=31.41 Aligned_cols=32 Identities=22% Similarity=0.182 Sum_probs=24.6
Q ss_pred HHHHHHHHhcCCC---ee-eEeeechhHHHHHHhhhc
Q 019962 189 CLLHWLEWEAGFG---KM-GVCGLSMGGVHAAMVGSL 221 (333)
Q Consensus 189 ~ll~wl~~~~g~~---~v-gv~G~SMGG~~Asl~A~~ 221 (333)
-++++|+ +.|+. ++ .++|.|+|..+|+++|+.
T Consensus 16 GVl~~L~-e~g~~l~~~~~~i~GtSaGAl~aa~~a~~ 51 (246)
T cd07222 16 GAAKALL-RHGKKLLKRVKRFAGASAGSLVAAVLLTA 51 (246)
T ss_pred HHHHHHH-HcCchhhccCCEEEEECHHHHHHHHHhcC
Confidence 4456666 67874 34 899999999999999853
No 253
>PRK04923 ribose-phosphate pyrophosphokinase; Provisional
Probab=33.53 E-value=1.7e+02 Score=28.82 Aligned_cols=103 Identities=17% Similarity=0.211 Sum_probs=57.5
Q ss_pred CceEEEEe-cCCCChhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCc-----ccchhhhHHHh-hhh-------
Q 019962 117 KMACVVHL-AGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGA-----KLLCVSDLLLL-GRA------- 182 (333)
Q Consensus 117 ~~v~viH~-aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s-----~l~~vsd~~~~-g~~------- 182 (333)
+.|++|+- ..+.++....-..++..+-++|-+.+.+-.||++..|=+..... ....+.+++.. |..
T Consensus 54 ~~V~iiqs~~~p~nd~lmeLl~~~~alr~~~a~~i~~ViPYl~YaRQDr~~~~~~~~isak~va~ll~~~g~d~vitvD~ 133 (319)
T PRK04923 54 QEVFVIQPTCAPSAENLMELLVLIDALKRASAASVTAVIPYFGYSRQDRRMRSSRVPITAKVAAKMISAMGADRVLTVDL 133 (319)
T ss_pred CeEEEEecCCCCCchHHHHHHHHHHHHHHcCCcEEEEEeeccccccccccccCCCCCccHHHHHHHHHhcCCCEEEEEeC
Confidence 45555652 22334555543357777877898888888999976644433211 12333344422 111
Q ss_pred --------------hHHHHHHHHHHHHHhcCCCeeeEeeechhHH-HHHHhh
Q 019962 183 --------------TIEEARCLLHWLEWEAGFGKMGVCGLSMGGV-HAAMVG 219 (333)
Q Consensus 183 --------------~i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~-~Asl~A 219 (333)
.+.-+..+.+|+.+..+.+...|++--.||. -|..+|
T Consensus 134 H~~~~~~~f~~p~~~l~~~~~l~~~i~~~~~~~~~vVVsPD~Ga~~rA~~lA 185 (319)
T PRK04923 134 HADQIQGFFDVPVDNVYASPLLLADIWRAYGTDNLIVVSPDVGGVVRARAVA 185 (319)
T ss_pred ChHHHHhhcCCCceeeeChHHHHHHHHHhcCCCCCEEEEECCchHHHHHHHH
Confidence 0111356778886233678888888888883 333343
No 254
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=33.46 E-value=52 Score=32.11 Aligned_cols=104 Identities=18% Similarity=0.120 Sum_probs=44.1
Q ss_pred CCceEEEEecCCCChhHHHhh-hhchHHHh---cCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHH
Q 019962 116 QKMACVVHLAGTGDHTFERRL-RLGGPLLK---ENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLL 191 (333)
Q Consensus 116 ~~~v~viH~aG~Gd~~~~~r~-~la~pL~~---~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll 191 (333)
.+|+++.| |-||+...... .....+++ -|+-|..++. |.....++..+...++ -.-+.++...+
T Consensus 5 ~~PvViwH--GmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i---g~~~~~D~~~s~f~~v-------~~Qv~~vc~~l 72 (279)
T PF02089_consen 5 PLPVVIWH--GMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI---GNDPSEDVENSFFGNV-------NDQVEQVCEQL 72 (279)
T ss_dssp S--EEEE----TT--S--TTTHHHHHHHHHHHSTT--EEE--S---SSSHHHHHHHHHHSHH-------HHHHHHHHHHH
T ss_pred CCcEEEEE--cCccccCChhHHHHHHHHHHHhCCCceEEEEEE---CCCcchhhhhhHHHHH-------HHHHHHHHHHH
Confidence 47888888 77876432211 22223333 3766665543 2221112111111222 12233334444
Q ss_pred HHHHHhcCCCeeeEeeechhHHHHHHhhhcCCC-ceeeecccC
Q 019962 192 HWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPT-PVATLPFLS 233 (333)
Q Consensus 192 ~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~-~v~~vp~~~ 233 (333)
.-.. ++. .-+.++|+|=||-++=.++-..|. +|.++.-++
T Consensus 73 ~~~p-~L~-~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlg 113 (279)
T PF02089_consen 73 ANDP-ELA-NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLG 113 (279)
T ss_dssp HH-G-GGT-T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES
T ss_pred hhCh-hhh-cceeeeeeccccHHHHHHHHHCCCCCceeEEEec
Confidence 3332 222 568999999999998888766653 566665555
No 255
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=33.05 E-value=22 Score=34.99 Aligned_cols=50 Identities=20% Similarity=0.242 Sum_probs=40.2
Q ss_pred eechhHHHHHHhhhcCCCcee----------eec------ccCCC-Ccccccccc-ccccCccHHHHH
Q 019962 207 GLSMGGVHAAMVGSLHPTPVA----------TLP------FLSPH-SAVVAFCEG-ILKHGTAWEALR 256 (333)
Q Consensus 207 G~SMGG~~Asl~A~~~P~~v~----------~vp------~~~~~-ta~~vfteG-vl~~~~~w~~L~ 256 (333)
--|--|.+|+..|+++|.+.. .+| |+++. +++-+++.+ ++...++|++.-
T Consensus 76 ~T~~EG~fasp~a~~~p~~mP~~~~~A~~~~liPQK~~~KOG~~a~tgdh~y~rr~~L~~p~~k~~i~ 143 (371)
T KOG1551|consen 76 ATLREGVFASPAASNWPKPMPPESRTARVAWLIPQKMADLCLSWALTGDHVYTRRLVLSKPINKREIA 143 (371)
T ss_pred ceehhhhhcCchhhhCccCCCCcccceeeeeecccCcCCeeEEEeecCCceeEeeeeecCchhhhcch
Confidence 457889999999999998777 888 88875 888898888 566677777643
No 256
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=32.52 E-value=34 Score=29.42 Aligned_cols=23 Identities=9% Similarity=0.067 Sum_probs=20.6
Q ss_pred eEEEEEecCCccccchhhHHhhh
Q 019962 295 AVIFVAATVSTVFDYHHEEVLKM 317 (333)
Q Consensus 295 ~ilvV~g~~D~yVP~~~~~~L~~ 317 (333)
++++++|++|.++|.+.+..+.+
T Consensus 177 p~l~i~~~~D~~~p~~~~~~~~~ 199 (230)
T PF00561_consen 177 PTLIIWGEDDPLVPPESSEQLAK 199 (230)
T ss_dssp EEEEEEETTCSSSHHHHHHHHHH
T ss_pred CeEEEEeCCCCCCCHHHHHHHHH
Confidence 59999999999999999988654
No 257
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=32.39 E-value=56 Score=30.62 Aligned_cols=33 Identities=24% Similarity=0.134 Sum_probs=25.0
Q ss_pred HHHHHHHhcCCCe----eeEeeechhHHHHHHhhhcCC
Q 019962 190 LLHWLEWEAGFGK----MGVCGLSMGGVHAAMVGSLHP 223 (333)
Q Consensus 190 ll~wl~~~~g~~~----vgv~G~SMGG~~Asl~A~~~P 223 (333)
+++.|+ +.|+.. -.++|-|.|..+|+++|+..+
T Consensus 17 Vl~~L~-e~g~~l~~~~~~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 17 VASALR-EHAPRLLQNARRIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred HHHHHH-HcCcccccCCCEEEEEcHHHHHHHHHHhCCC
Confidence 344454 577652 399999999999999998765
No 258
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=32.29 E-value=46 Score=27.71 Aligned_cols=26 Identities=23% Similarity=0.148 Sum_probs=20.8
Q ss_pred hcCCCeeeEeeechhHHHHHHhhhcC
Q 019962 197 EAGFGKMGVCGLSMGGVHAAMVGSLH 222 (333)
Q Consensus 197 ~~g~~~vgv~G~SMGG~~Asl~A~~~ 222 (333)
..+...-.|+|.|.||.+|++++...
T Consensus 23 ~~~~~~d~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 23 GLGERFDVISGTSAGALNAALLALGY 48 (204)
T ss_dssp TGCCT-SEEEEECCHHHHHHHHHTC-
T ss_pred hhCCCccEEEEcChhhhhHHHHHhCC
Confidence 56677789999999999998888763
No 259
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=32.22 E-value=73 Score=31.29 Aligned_cols=117 Identities=18% Similarity=0.106 Sum_probs=55.3
Q ss_pred hhhhhHHHHHHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCCCceeeecccCCCCccccccccccccCccHHHHHHH
Q 019962 179 LGRATIEEARCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAVVAFCEGILKHGTAWEALREE 258 (333)
Q Consensus 179 ~g~~~i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~~v~~vp~~~~~ta~~vfteGvl~~~~~w~~L~~~ 258 (333)
.|.++|.+...-.+-|- +..-.++.|.|.|||.+-+..+-...++....+ ..++-.|-...+..|..+...
T Consensus 88 a~~aL~~aV~~~~~~lP-~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~v--------dGalw~GpP~~s~~w~~~t~~ 158 (289)
T PF10081_consen 88 AARALFEAVYARWSTLP-EDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRV--------DGALWVGPPFFSPLWRELTDR 158 (289)
T ss_pred HHHHHHHHHHHHHHhCC-cccCCeEEEeccCccccchhhhhccHHHhhhhc--------ceEEEeCCCCCChhHHHhccC
Confidence 33344444433333332 334589999999999876655443333221111 122233544445555555431
Q ss_pred HHhhhhcCCHHHHHH-----HHHHhh-ccCCCCCCCCCCCCCeEEEEEecCCccccc
Q 019962 259 LAAKKVAMTLEEVRE-----RMRNVL-SLTDVTRFPIPKIPNAVIFVAATVSTVFDY 309 (333)
Q Consensus 259 l~~~~~~lt~~~a~~-----rl~~~l-~~t~l~nf~~p~dp~~ilvV~g~~D~yVP~ 309 (333)
- +...- +.+- +.-... ++.++.....+-.+-++++++=..|-++=-
T Consensus 159 R--dpGSp---e~~Pv~~~G~~VRFa~~~~~l~~~~~~W~~pRvvylQhaSDPVvww 210 (289)
T PF10081_consen 159 R--DPGSP---EWLPVYDDGRHVRFANDPADLARPGAPWGPPRVVYLQHASDPVVWW 210 (289)
T ss_pred C--CCCCC---cccceecCCceEEEeCCcccccCCCCCCCCceEEEEecCCCCeeec
Confidence 1 11100 0011 111222 445555544454444777777777776644
No 260
>TIGR01251 ribP_PPkin ribose-phosphate pyrophosphokinase. In some systems, close homologs lacking enzymatic activity exist and perform regulatory functions. The model is designated subfamily rather than equivalog for this reason.
Probab=30.65 E-value=2.2e+02 Score=27.72 Aligned_cols=105 Identities=18% Similarity=0.225 Sum_probs=62.1
Q ss_pred CceEEE-EecCC-CChhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcc----cchhhhHHHh-hhhh------
Q 019962 117 KMACVV-HLAGT-GDHTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAK----LLCVSDLLLL-GRAT------ 183 (333)
Q Consensus 117 ~~v~vi-H~aG~-Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~----l~~vsd~~~~-g~~~------ 183 (333)
+.++++ +--.. .++.+..-..++..+-++|.+.+.+-.||++..|=+.....+ ...+.+++.. |...
T Consensus 48 ~~v~iv~~s~~~~~~~~l~el~~~~~a~r~~ga~~i~~v~PYl~Y~RqDr~~~~ge~is~~~~a~ll~~~g~d~vit~Dl 127 (308)
T TIGR01251 48 KDVFIIQQSTSAPVNDNLMELLIMIDALKRASAKSITAVIPYYGYARQDKKFKSREPISAKLVANLLETAGADRVLTVDL 127 (308)
T ss_pred CeEEEEeCCCCCCccHHHHHHHHHHHHHHHcCCCeEEEEEEecccchhccccCCCCCchHHHHHHHHHHcCCCEEEEecC
Confidence 345556 42221 244554433578888778988888888988766544332221 1333333322 1110
Q ss_pred ---------------HHHHHHHHHHHHHhcCCCeeeEeeechhHH-HHHHhhhcC
Q 019962 184 ---------------IEEARCLLHWLEWEAGFGKMGVCGLSMGGV-HAAMVGSLH 222 (333)
Q Consensus 184 ---------------i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~-~Asl~A~~~ 222 (333)
+.=+..+.+|+. +.......|.|...||. .|..+|...
T Consensus 128 Hs~~~~~~f~ip~~~l~a~~~l~~~i~-~~~~~~~viv~pd~g~~~~A~~lA~~L 181 (308)
T TIGR01251 128 HSPQIQGFFDVPVDNLYASPVLAEYLK-KKILDNPVVVSPDAGGVERAKKVADAL 181 (308)
T ss_pred ChHHhcCcCCCceecccCHHHHHHHHH-hhCCCCCEEEEECCchHHHHHHHHHHh
Confidence 111367899997 55567888999999996 677776543
No 261
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=30.63 E-value=58 Score=30.74 Aligned_cols=34 Identities=18% Similarity=0.119 Sum_probs=24.6
Q ss_pred HHHHHHHHhcC--CCeeeEeeechhHHHHHHhhhcCC
Q 019962 189 CLLHWLEWEAG--FGKMGVCGLSMGGVHAAMVGSLHP 223 (333)
Q Consensus 189 ~ll~wl~~~~g--~~~vgv~G~SMGG~~Asl~A~~~P 223 (333)
-+++.|+ +.| ...=-++|-|+|..+|+.+|+..+
T Consensus 17 GVl~aL~-e~g~~~~~d~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 17 GVAVCLK-KYAPHLLLNKISGASAGALAACCLLCDLP 52 (245)
T ss_pred HHHHHHH-HhCcccCCCeEEEEcHHHHHHHHHHhCCc
Confidence 3455565 555 223349999999999999998766
No 262
>TIGR01499 folC folylpolyglutamate synthase/dihydrofolate synthase. A mutation study of the FolC gene of E. coli suggests that both activitities belong to the same active site. Because some examples are monofunctional (and these cannot be separated phylogenetically), the model is treated as subfamily, not equivalog.
Probab=30.50 E-value=95 Score=30.82 Aligned_cols=35 Identities=26% Similarity=0.272 Sum_probs=24.7
Q ss_pred EEEecCCCChh-HHHhhhhchHHHhcCccEEEeecccC
Q 019962 121 VVHLAGTGDHT-FERRLRLGGPLLKENIATMVLESPFY 157 (333)
Q Consensus 121 viH~aG~Gd~~-~~~r~~la~pL~~~Gi~~ill~~Py~ 157 (333)
+||.+||=.-+ -.. .++.-|.++|+.|-+++.|+.
T Consensus 20 vI~VtGTNGKgSt~~--~l~~iL~~~g~~vg~~tSphl 55 (397)
T TIGR01499 20 VIHVAGTNGKGSTCA--FLESILRAAGYKVGLFTSPHL 55 (397)
T ss_pred EEEEeCCCChHHHHH--HHHHHHHHcCCCeeEEeCCCc
Confidence 59999997332 222 344445557999999999986
No 263
>PRK02458 ribose-phosphate pyrophosphokinase; Provisional
Probab=30.15 E-value=2e+02 Score=28.37 Aligned_cols=76 Identities=12% Similarity=0.138 Sum_probs=46.3
Q ss_pred CceEEEEecCCC-ChhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcc-cchhhhHHHhhhhhHHHHHHHHHHH
Q 019962 117 KMACVVHLAGTG-DHTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAK-LLCVSDLLLLGRATIEEARCLLHWL 194 (333)
Q Consensus 117 ~~v~viH~aG~G-d~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~-l~~vsd~~~~g~~~i~E~r~ll~wl 194 (333)
+.+++|+-...- ++....-..++..+-++|...+.+-.||++..|-+.....+ ..+ ++.+.+.|
T Consensus 57 ~dV~ii~s~~~~~nd~l~eLll~~~alr~~~a~~i~lViPYl~YaRQDr~~~~ge~is--------------ak~~a~lL 122 (323)
T PRK02458 57 DDIYIIQSTSFPVNDHLWELLIMIDACKRASANTVNVVLPYFGYARQDRIAKPREPIT--------------AKLVANML 122 (323)
T ss_pred CeEEEEecCCCCCchHHHHHHHHHHHHHHcCCceEEEEEeccccchhhcccCCCCCch--------------HHHHHHHH
Confidence 345566632222 34444433578888788998888899999887655443322 122 27777777
Q ss_pred HHhcCCCeeeEee
Q 019962 195 EWEAGFGKMGVCG 207 (333)
Q Consensus 195 ~~~~g~~~vgv~G 207 (333)
. ..|+++|...=
T Consensus 123 ~-~~g~d~vitvD 134 (323)
T PRK02458 123 V-KAGVDRVLTLD 134 (323)
T ss_pred h-hcCCCeEEEEe
Confidence 6 56777765543
No 264
>PF06377 Adipokin_hormo: Adipokinetic hormone; InterPro: IPR010475 This family consists of several insect adipokinetic hormone as well as the related crustacean red pigment concentrating hormone (RPCH) []. Flight activity of insects comprises one of the most intense biochemical processes known in nature, and therefore provides an attractive model system to study the hormonal regulation of metabolism during physical exercise. In long-distance flying insects, such as the migratory locust, both carbohydrate and lipid reserves are utilised as fuels for sustained flight activity. The mobilisation of these energy stores in Locusta migratoria (Migratory locust) is mediated by three structurally related adipokinetic hormones (AKHs), which are all capable of stimulating the release of both carbohydrates and lipids from the fat body [].; GO: 0005179 hormone activity
Probab=29.19 E-value=23 Score=25.68 Aligned_cols=8 Identities=63% Similarity=1.431 Sum_probs=6.6
Q ss_pred ccCCCCCC
Q 019962 31 FSRGWGGS 38 (333)
Q Consensus 31 F~~GwG~~ 38 (333)
|+.||||-
T Consensus 4 FSp~WGKR 11 (48)
T PF06377_consen 4 FSPGWGKR 11 (48)
T ss_pred cCCCcccc
Confidence 89999973
No 265
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=28.72 E-value=75 Score=29.64 Aligned_cols=34 Identities=15% Similarity=0.015 Sum_probs=26.7
Q ss_pred HHHHHHHHHhcCCCeeeEeeechhHHHHHHhhhc
Q 019962 188 RCLLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSL 221 (333)
Q Consensus 188 r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~ 221 (333)
+++-.||+..++-.|+.|+|+|=|+.|...+--.
T Consensus 82 ~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e 115 (207)
T PF11288_consen 82 AAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKE 115 (207)
T ss_pred HHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHH
Confidence 6677788744445699999999999999887543
No 266
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=27.30 E-value=74 Score=30.00 Aligned_cols=35 Identities=20% Similarity=0.214 Sum_probs=26.8
Q ss_pred EEEEecCCCChhHHHhh-hhchHHHhcCccEEEeeccc
Q 019962 120 CVVHLAGTGDHTFERRL-RLGGPLLKENIATMVLESPF 156 (333)
Q Consensus 120 ~viH~aG~Gd~~~~~r~-~la~pL~~~Gi~~ill~~Py 156 (333)
++|+..|+|.| .++. .++..|.++|+.|.+++.+.
T Consensus 2 ~~~~~~~~gG~--~~~~~~la~~l~~~G~ev~v~~~~~ 37 (350)
T cd03785 2 ILIAGGGTGGH--IFPALALAEELRERGAEVLFLGTKR 37 (350)
T ss_pred EEEEecCchhh--hhHHHHHHHHHHhCCCEEEEEECCC
Confidence 46887777744 3333 69999999999999998764
No 267
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=26.93 E-value=1e+02 Score=30.28 Aligned_cols=26 Identities=27% Similarity=0.363 Sum_probs=22.7
Q ss_pred hcCCCeeeEeeechhHHHHHHhhhcC
Q 019962 197 EAGFGKMGVCGLSMGGVHAAMVGSLH 222 (333)
Q Consensus 197 ~~g~~~vgv~G~SMGG~~Asl~A~~~ 222 (333)
+.|+.+=.++|.|.|..+|+++++..
T Consensus 93 e~~l~~~~i~GtSaGAi~aa~~~~~~ 118 (298)
T cd07206 93 EQDLLPRVISGSSAGAIVAALLGTHT 118 (298)
T ss_pred HcCCCCCEEEEEcHHHHHHHHHHcCC
Confidence 57887888999999999999999754
No 268
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=26.29 E-value=1.1e+02 Score=29.23 Aligned_cols=38 Identities=21% Similarity=-0.034 Sum_probs=25.3
Q ss_pred hHHHHHHHHHHHHHhcCCC----eeeEeeechhHHHHHHhhhcC
Q 019962 183 TIEEARCLLHWLEWEAGFG----KMGVCGLSMGGVHAAMVGSLH 222 (333)
Q Consensus 183 ~i~E~r~ll~wl~~~~g~~----~vgv~G~SMGG~~Asl~A~~~ 222 (333)
.+..+..| +.++ +.+.. -=.++|.|.||.+|+++|+..
T Consensus 14 Gi~~~~vL-~~Le-~~~~~~~~~fD~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 14 GIVQLVLL-KRLA-EEFPSFLDQIDLFAGTSAGSLIALGLALGY 55 (288)
T ss_pred HHHHHHHH-HHHH-HhCcccccceeEEEEeCHHHHHHHHHHcCc
Confidence 34444444 4454 34422 228999999999999998765
No 269
>PLN02369 ribose-phosphate pyrophosphokinase
Probab=25.99 E-value=3e+02 Score=26.81 Aligned_cols=79 Identities=14% Similarity=0.212 Sum_probs=48.3
Q ss_pred CceEEEEecCCC-ChhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcc-cchhhhHHHhhhhhHHHHHHHHHHH
Q 019962 117 KMACVVHLAGTG-DHTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAK-LLCVSDLLLLGRATIEEARCLLHWL 194 (333)
Q Consensus 117 ~~v~viH~aG~G-d~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~-l~~vsd~~~~g~~~i~E~r~ll~wl 194 (333)
+-|++|+-.... ++....-..++..+-+.|...+.+-.||++..|=+.....+ ... ++.+.+.|
T Consensus 39 ~~V~iv~s~~~p~nd~l~eLl~~~~a~r~~~a~~i~~ViPYl~YsRQDr~~~~~e~is--------------ak~va~lL 104 (302)
T PLN02369 39 CDVFLVQPTCPPANENLMELLIMIDACRRASAKRITAVIPYFGYARADRKTQGRESIA--------------AKLVANLI 104 (302)
T ss_pred CeEEEEecCCCCcchHHHHHHHHHHHHHHcCCCeEEEEeecccccccccccCCCCCch--------------HHHHHHHH
Confidence 445556632212 33344333578888778999899999999887655443222 112 26777777
Q ss_pred HHhcCCCeeeEeeech
Q 019962 195 EWEAGFGKMGVCGLSM 210 (333)
Q Consensus 195 ~~~~g~~~vgv~G~SM 210 (333)
. ..|+.++...=..-
T Consensus 105 ~-~~g~d~vi~vDlHs 119 (302)
T PLN02369 105 T-EAGADRVLACDLHS 119 (302)
T ss_pred H-hcCCCEEEEEECCc
Confidence 6 66888876665543
No 270
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=25.43 E-value=1.2e+02 Score=28.26 Aligned_cols=22 Identities=36% Similarity=0.283 Sum_probs=19.4
Q ss_pred CCCeeeEeeechhHHHHHHhhh
Q 019962 199 GFGKMGVCGLSMGGVHAAMVGS 220 (333)
Q Consensus 199 g~~~vgv~G~SMGG~~Asl~A~ 220 (333)
.-+++.|.|.|.|+.+|+....
T Consensus 46 ~~~~vvV~GySQGA~Va~~~~~ 67 (225)
T PF08237_consen 46 AGGPVVVFGYSQGAVVASNVLR 67 (225)
T ss_pred CCCCEEEEEECHHHHHHHHHHH
Confidence 5688999999999999999754
No 271
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=25.42 E-value=49 Score=34.98 Aligned_cols=28 Identities=25% Similarity=0.277 Sum_probs=24.5
Q ss_pred hcCCCeeeEeeechhHHHHHHhhhcCCC
Q 019962 197 EAGFGKMGVCGLSMGGVHAAMVGSLHPT 224 (333)
Q Consensus 197 ~~g~~~vgv~G~SMGG~~Asl~A~~~P~ 224 (333)
+++.-|=.|+|-|+|+.+|+++++...+
T Consensus 198 e~dLlP~IIsGsS~GaivAsl~~v~~~e 225 (543)
T KOG2214|consen 198 EQDLLPNIISGSSAGAIVASLVGVRSNE 225 (543)
T ss_pred HccccchhhcCCchhHHHHHHHhhcchH
Confidence 5888888999999999999999986543
No 272
>PHA01735 hypothetical protein
Probab=25.41 E-value=78 Score=24.85 Aligned_cols=33 Identities=24% Similarity=0.407 Sum_probs=28.2
Q ss_pred HhhhhhHHHHHHHHHHHHHhcCCCeeeEeeechh
Q 019962 178 LLGRATIEEARCLLHWLEWEAGFGKMGVCGLSMG 211 (333)
Q Consensus 178 ~~g~~~i~E~r~ll~wl~~~~g~~~vgv~G~SMG 211 (333)
..|.++-+|.++..+||+ .+++..+.+.|.-|-
T Consensus 26 ksgeATtaDL~AA~d~Lk-~NdItgv~~~gspl~ 58 (76)
T PHA01735 26 KSGEATTADLRAACDWLK-SNDITGVAVDGSPLA 58 (76)
T ss_pred hcCcccHHHHHHHHHHHH-HCCCceeeCCCCHHH
Confidence 678888999999999999 899988888886553
No 273
>COG0285 FolC Folylpolyglutamate synthase [Coenzyme metabolism]
Probab=25.29 E-value=79 Score=32.64 Aligned_cols=35 Identities=29% Similarity=0.283 Sum_probs=24.3
Q ss_pred EEEecCCCChh-HHHhhhhchHHHhcCccEEEeecccC
Q 019962 121 VVHLAGTGDHT-FERRLRLGGPLLKENIATMVLESPFY 157 (333)
Q Consensus 121 viH~aG~Gd~~-~~~r~~la~pL~~~Gi~~ill~~Py~ 157 (333)
+||.+||=.-| =.+ .+..-|.++||+|-.++.|+-
T Consensus 46 vIhVaGTNGKGSt~a--fl~siL~~aG~~VG~yTSPHL 81 (427)
T COG0285 46 VIHVAGTNGKGSTCA--FLESILREAGYKVGVYTSPHL 81 (427)
T ss_pred eEEEeCCCCchhHHH--HHHHHHHHcCCCceEECCCcc
Confidence 49999997332 111 233344468999999999986
No 274
>PRK01259 ribose-phosphate pyrophosphokinase; Provisional
Probab=25.27 E-value=2.4e+02 Score=27.56 Aligned_cols=100 Identities=17% Similarity=0.232 Sum_probs=59.6
Q ss_pred CceEEEEecC-CCChhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcc----cchhhhHHHh-hhhh-------
Q 019962 117 KMACVVHLAG-TGDHTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAK----LLCVSDLLLL-GRAT------- 183 (333)
Q Consensus 117 ~~v~viH~aG-~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~----l~~vsd~~~~-g~~~------- 183 (333)
+.|++|+-.. ..++....-..++..+-++|-+.+.+-.||++..|=+.....+ ...+.+++.. |...
T Consensus 48 ~~V~ii~s~~~~~nd~l~eLll~~~alr~~ga~~i~lViPYl~YsRQDr~~~~ge~isak~~a~lL~~~g~d~vitvD~H 127 (309)
T PRK01259 48 KDVFIIQSTCAPTNDNLMELLIMIDALKRASAGRITAVIPYFGYARQDRKARSRVPITAKLVANLLETAGADRVLTMDLH 127 (309)
T ss_pred CEEEEECCCCCCCcHHHHHHHHHHHHHHHcCCceEEEEeeccccchhhhhhccCCCchHHHHHHHHhhcCCCEEEEEcCC
Confidence 3455565321 2244455433577788778988888889999766544332211 1333333322 1110
Q ss_pred --------------HHHHHHHHHHHHHhcCCCeeeEeeechhHHHHHH
Q 019962 184 --------------IEEARCLLHWLEWEAGFGKMGVCGLSMGGVHAAM 217 (333)
Q Consensus 184 --------------i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl 217 (333)
+.=...+.+|++ +.|+++..|+|.--||..=+.
T Consensus 128 ~~~~~~~f~~p~~~l~~~~~l~~~i~-~~~~~~~vvv~pd~Gg~~~A~ 174 (309)
T PRK01259 128 ADQIQGFFDIPVDNLYGSPILLEDIK-QKNLENLVVVSPDVGGVVRAR 174 (309)
T ss_pred hHHHcCcCCCCceeeeecHHHHHHHH-hcCCCCcEEEEECCCcHHHHH
Confidence 001267889997 678999999999999976443
No 275
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=24.19 E-value=87 Score=33.30 Aligned_cols=35 Identities=17% Similarity=-0.050 Sum_probs=28.6
Q ss_pred HHHHHHHhcCCCeeeEeeechhHHHHHHhhhcCCC
Q 019962 190 LLHWLEWEAGFGKMGVCGLSMGGVHAAMVGSLHPT 224 (333)
Q Consensus 190 ll~wl~~~~g~~~vgv~G~SMGG~~Asl~A~~~P~ 224 (333)
+...++++.|+.|-.++|+|||=+.|+-+|..+..
T Consensus 254 La~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvls~ 288 (538)
T TIGR02816 254 LTQLLCDEFAIKPDFALGYSKGEASMWASLGVWKN 288 (538)
T ss_pred HHHHHHHhcCCCCCEEeecCHHHHHHHHHhCCCCc
Confidence 44444226899999999999999999999999863
No 276
>PRK03092 ribose-phosphate pyrophosphokinase; Provisional
Probab=24.03 E-value=4.8e+02 Score=25.44 Aligned_cols=106 Identities=17% Similarity=0.165 Sum_probs=59.2
Q ss_pred CceEEEEecCCC-ChhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcc----cchhhhHHHh-hhhh-------
Q 019962 117 KMACVVHLAGTG-DHTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAK----LLCVSDLLLL-GRAT------- 183 (333)
Q Consensus 117 ~~v~viH~aG~G-d~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~----l~~vsd~~~~-g~~~------- 183 (333)
+-+++|+--... ++..+.-..++..+-++|-+.+.+-.||+|..|=+...... ...+.+++.. |...
T Consensus 37 ~~v~ii~s~~~p~nd~l~ell~~~~a~r~~~a~~i~~ViPYl~YaRQDr~~~~~e~isak~va~lL~~~g~d~vitvD~H 116 (304)
T PRK03092 37 CDAFVLQSHTAPINKWLMEQLIMIDALKRASAKRITVVLPFYPYARQDKKHRGREPISARLVADLFKTAGADRIMTVDLH 116 (304)
T ss_pred CEEEEEeCCCCCCcHHHHHHHHHHHHHHHcCCCeEEEEEecccccccccccCCCCCccHHHHHHHHHhcCCCeEEEEecC
Confidence 445555522122 33344323567777778999898999999876444332221 2333344432 1110
Q ss_pred ---HHH-----------HHHHHHHHHHhcCCCeeeEeeechhHHH-HHHhhhcC
Q 019962 184 ---IEE-----------ARCLLHWLEWEAGFGKMGVCGLSMGGVH-AAMVGSLH 222 (333)
Q Consensus 184 ---i~E-----------~r~ll~wl~~~~g~~~vgv~G~SMGG~~-Asl~A~~~ 222 (333)
+.. +..+.+|+++..+.+...|++.--||.. |..+|..-
T Consensus 117 ~~~~~~~f~~p~~~l~~~~~la~~i~~~~~~~~~vvVspd~Ga~~~a~~la~~L 170 (304)
T PRK03092 117 TAQIQGFFDGPVDHLFAMPLLADYVRDKYDLDNVTVVSPDAGRVRVAEQWADRL 170 (304)
T ss_pred hHHHHhhcCCCeeeEechHHHHHHHHHhcCCCCcEEEEecCchHHHHHHHHHHc
Confidence 111 2467888863336788899999999974 44455443
No 277
>KOG2614 consensus Kynurenine 3-monooxygenase and related flavoprotein monooxygenases [Energy production and conversion; General function prediction only]
Probab=23.79 E-value=1.7e+02 Score=30.22 Aligned_cols=73 Identities=26% Similarity=0.254 Sum_probs=40.8
Q ss_pred EEEEecCCCChhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcccchhhhHHHhhhhhHHHHHHHHHHHHHhcC
Q 019962 120 CVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRATIEEARCLLHWLEWEAG 199 (333)
Q Consensus 120 ~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~l~~vsd~~~~g~~~i~E~r~ll~wl~~~~g 199 (333)
++|-|+|-+... .|-.|.+.||+|+++|. |+++.-...++ .+... +-.++|+-.+-.|++ ++|
T Consensus 5 VvIvGgGI~Gla------~A~~l~r~G~~v~VlE~-----~e~~R~~g~si----~L~~n-g~~aLkai~~~e~i~-~~g 67 (420)
T KOG2614|consen 5 VVIVGGGIVGLA------TALALHRKGIDVVVLES-----REDPRGEGTSI----NLALN-GWRALKAIGLKEQIR-EQG 67 (420)
T ss_pred EEEECCcHHHHH------HHHHHHHcCCeEEEEee-----ccccccCCcce----eehhh-HHHHHHHcccHHHHH-Hhc
Confidence 457766666322 24456679999999987 53332222222 11122 223556656778888 666
Q ss_pred C---CeeeEeeec
Q 019962 200 F---GKMGVCGLS 209 (333)
Q Consensus 200 ~---~~vgv~G~S 209 (333)
+ +++-+.|.|
T Consensus 68 ip~~~~v~~~~~s 80 (420)
T KOG2614|consen 68 IPLGGRVLIHGDS 80 (420)
T ss_pred CcccceeeeecCC
Confidence 5 455444444
No 278
>COG2072 TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]
Probab=22.48 E-value=1.9e+02 Score=29.53 Aligned_cols=64 Identities=16% Similarity=0.144 Sum_probs=42.9
Q ss_pred ccCeEEEeeeeeCCCcccccCCCCccccceeEEEeecCCCCCC-----CceEEEEecCCCChhHHHhhhhchHHHhcCcc
Q 019962 74 TQTAVLREGVFRTPCDEQLMSALPPESHNARVAFLAPKCVPPQ-----KMACVVHLAGTGDHTFERRLRLGGPLLKENIA 148 (333)
Q Consensus 74 ~~~~~~~~g~F~Sp~~~~~p~~lp~~s~~a~~~~~~p~~~~~~-----~~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~ 148 (333)
...+.+=.|.|..|..+.+|++.+-. .+.+.+++|++. |.|+| = |+|.|+. .++..|.+.|=.
T Consensus 133 a~~vV~ATG~~~~P~iP~~~G~~~f~-----g~~~HS~~~~~~~~~~GKrV~V-I--G~GaSA~----di~~~l~~~ga~ 200 (443)
T COG2072 133 ADFVVVATGHLSEPYIPDFAGLDEFK-----GRILHSADWPNPEDLRGKRVLV-I--GAGASAV----DIAPELAEVGAS 200 (443)
T ss_pred cCEEEEeecCCCCCCCCCCCCccCCC-----ceEEchhcCCCccccCCCeEEE-E--CCCccHH----HHHHHHHhcCCe
Confidence 34556778999999876666553332 346788899763 66543 3 8887776 677788888733
Q ss_pred E
Q 019962 149 T 149 (333)
Q Consensus 149 ~ 149 (333)
|
T Consensus 201 v 201 (443)
T COG2072 201 V 201 (443)
T ss_pred e
Confidence 3
No 279
>PRK02269 ribose-phosphate pyrophosphokinase; Provisional
Probab=22.06 E-value=3.2e+02 Score=26.86 Aligned_cols=78 Identities=14% Similarity=0.249 Sum_probs=49.0
Q ss_pred CceEEEEecC-CCChhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcc-cchhhhHHHhhhhhHHHHHHHHHHH
Q 019962 117 KMACVVHLAG-TGDHTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAK-LLCVSDLLLLGRATIEEARCLLHWL 194 (333)
Q Consensus 117 ~~v~viH~aG-~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~-l~~vsd~~~~g~~~i~E~r~ll~wl 194 (333)
+.|++|+-.. +-++....-..++..|-++|-..+.+-.||++..|=+.....+ ..+ ++.+.+.|
T Consensus 53 ~dV~iv~s~~~~~nd~lmelll~~~alr~~~a~~i~~V~PYl~YaRQDr~~~~~e~is--------------ak~~a~ll 118 (320)
T PRK02269 53 HHVFILQSTSSPVNDNLMEILIMVDALKRASAESINVVMPYYGYARQDRKARSREPIT--------------SKLVANML 118 (320)
T ss_pred CEEEEEecCCCCccchHHHHHHHHHHHHHhCCCeEEEEEeccccchhhcccCCCCCch--------------HHHHHHHH
Confidence 3455565321 1133444333567777778999899999999887655443322 222 27778888
Q ss_pred HHhcCCCeeeEeeec
Q 019962 195 EWEAGFGKMGVCGLS 209 (333)
Q Consensus 195 ~~~~g~~~vgv~G~S 209 (333)
. ..|++++.....-
T Consensus 119 ~-~~g~d~vit~D~H 132 (320)
T PRK02269 119 E-VAGVDRLLTVDLH 132 (320)
T ss_pred h-hcCCCEEEEECCC
Confidence 7 6788888777664
No 280
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=21.93 E-value=1.1e+02 Score=29.11 Aligned_cols=34 Identities=18% Similarity=0.008 Sum_probs=25.3
Q ss_pred HHHHHHHHhcCCC----eeeEeeechhHHHHHHhhhcCC
Q 019962 189 CLLHWLEWEAGFG----KMGVCGLSMGGVHAAMVGSLHP 223 (333)
Q Consensus 189 ~ll~wl~~~~g~~----~vgv~G~SMGG~~Asl~A~~~P 223 (333)
.+++.|+ +.|.. .-.++|.|.|..+|+..|+..+
T Consensus 21 GVl~~L~-e~g~~l~~~~~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 21 GVASCLL-EHAPFLVANARKIYGASAGALTATALVTGVC 58 (249)
T ss_pred HHHHHHH-hcCCcccccCCeEEEEcHHHHHHHHHHcCCC
Confidence 3445555 46654 4678999999999999988765
No 281
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=21.89 E-value=3.7e+02 Score=26.42 Aligned_cols=35 Identities=20% Similarity=0.145 Sum_probs=26.4
Q ss_pred EEEEecCCCChhHHHhhhhchHHHhcCccEEEeecc
Q 019962 120 CVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESP 155 (333)
Q Consensus 120 ~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~P 155 (333)
++|=+.|||.|-|=- --+++.|.+.|+.+..+..+
T Consensus 4 i~~~~GGTGGHi~Pa-la~a~~l~~~g~~v~~vg~~ 38 (352)
T PRK12446 4 IVFTGGGSAGHVTPN-LAIIPYLKEDNWDISYIGSH 38 (352)
T ss_pred EEEEcCCcHHHHHHH-HHHHHHHHhCCCEEEEEECC
Confidence 357888999888743 14788888889999888643
No 282
>PRK00934 ribose-phosphate pyrophosphokinase; Provisional
Probab=21.59 E-value=4e+02 Score=25.58 Aligned_cols=99 Identities=13% Similarity=0.148 Sum_probs=56.4
Q ss_pred CceEEEEecCCCChhHHHhhhhchHHHhcCccEEEeecccCCCCCCCcccCcc----cchhhhHHHhhhh----------
Q 019962 117 KMACVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQRRPLLQRGAK----LLCVSDLLLLGRA---------- 182 (333)
Q Consensus 117 ~~v~viH~aG~Gd~~~~~r~~la~pL~~~Gi~~ill~~Py~G~RkP~~q~~s~----l~~vsd~~~~g~~---------- 182 (333)
+.++++...-+-++.+..-..++..+-++|-+.+.+-.||++..|=+.....+ ...+.+++.....
T Consensus 47 ~~v~i~~~~~~~~d~l~ell~~~~alr~~ga~~i~~v~PY~~YaRqDr~~~~ge~isak~~a~ll~~~~d~vitvD~H~~ 126 (285)
T PRK00934 47 EDVVIISTTYPQDENLVELLLLIDALRDEGAKSITLVIPYLGYARQDKRFKPGEPISARAIAKIISAYYDRIITINIHEP 126 (285)
T ss_pred CEEEEEeCCCCCcHHHHHHHHHHHHHHHcCCCeEEEEecCCcccccccccCCCCCccHHHHHHHHHHhcCEEEEEcCChH
Confidence 34544443222122244333577778788998888889999776544433222 2334444422101
Q ss_pred -----------hHHHHHHHHHHHHHhcCCCeeeEeeechhHHHHHH
Q 019962 183 -----------TIEEARCLLHWLEWEAGFGKMGVCGLSMGGVHAAM 217 (333)
Q Consensus 183 -----------~i~E~r~ll~wl~~~~g~~~vgv~G~SMGG~~Asl 217 (333)
.+.-++.+.+|++ . +.++..|+|.-.||..-+.
T Consensus 127 ~~~~~f~~~~~~l~a~~~la~~i~-~-~~~~~vvv~pd~Ga~~~a~ 170 (285)
T PRK00934 127 SILEFFPIPFINLDAAPLIAEYIG-D-KLDDPLVLAPDKGALELAK 170 (285)
T ss_pred HHcCcCCCcEeEeecHHHHHHHHH-h-cCCCCEEEEeCCchHHHHH
Confidence 0111478888996 3 5566678899999875443
No 283
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=20.18 E-value=71 Score=31.79 Aligned_cols=18 Identities=33% Similarity=0.224 Sum_probs=16.5
Q ss_pred eEeeechhHHHHHHhhhc
Q 019962 204 GVCGLSMGGVHAAMVGSL 221 (333)
Q Consensus 204 gv~G~SMGG~~Asl~A~~ 221 (333)
.|+|.|.||.+|+++|..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 799999999999999874
No 284
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=20.01 E-value=1.6e+02 Score=27.39 Aligned_cols=38 Identities=24% Similarity=0.196 Sum_probs=26.1
Q ss_pred hHHHHHHHHHHHHHhcCCC-ee-----eEeeechhHHHHHHhhhc
Q 019962 183 TIEEARCLLHWLEWEAGFG-KM-----GVCGLSMGGVHAAMVGSL 221 (333)
Q Consensus 183 ~i~E~r~ll~wl~~~~g~~-~v-----gv~G~SMGG~~Asl~A~~ 221 (333)
.+..+..|..+.+ +.+.. ++ .++|.|-||.+|++++.-
T Consensus 11 G~~~~~~L~~le~-~~~~~~~~~~~fd~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 11 GIIPAEILAELEK-RLGKPSRIADLFDLIAGTSTGGIIALGLALG 54 (258)
T ss_pred HHHHHHHHHHHHH-HhCCCCchhhccceeeeccHHHHHHHHHhcC
Confidence 4555555555554 44432 24 599999999999999886
Done!