Query 019963
Match_columns 333
No_of_seqs 202 out of 531
Neff 3.6
Searched_HMMs 29240
Date Mon Mar 25 09:43:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019963.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019963hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wmh_B Partitioning defective- 95.4 0.03 1E-06 44.9 6.1 59 243-327 4-62 (86)
2 1vd2_A Protein kinase C, IOTA 95.2 0.056 1.9E-06 43.3 7.1 57 244-327 5-61 (89)
3 2kkc_A Sequestosome-1; P62, PB 94.6 0.045 1.6E-06 44.8 5.3 59 245-328 5-78 (102)
4 2ktr_A Sequestosome-1; autopha 93.4 0.12 4.2E-06 43.3 5.8 59 244-327 19-92 (117)
5 1q1o_A Cell division control p 82.9 2.8 9.6E-05 34.2 6.3 65 244-329 4-74 (98)
6 2bkf_A Zinc-finger protein NBR 79.0 3.9 0.00013 32.8 5.8 54 246-327 7-60 (87)
7 1oey_J P40-PHOX, neutrophil cy 76.9 3.6 0.00012 34.3 5.1 38 262-327 28-65 (107)
8 1wj6_A KIAA0049 protein, RSGI 76.9 3.9 0.00013 33.7 5.3 54 246-327 15-68 (101)
9 1e8p_A Endoglucanase, dockerin 50.8 4.9 0.00017 29.0 0.9 13 314-326 20-32 (46)
10 1pqs_A Cell division control p 49.4 21 0.00073 27.5 4.4 48 261-329 6-53 (77)
11 3o27_A Putative uncharacterize 38.1 20 0.00068 27.7 2.6 22 306-327 38-59 (68)
12 3brc_A Conserved protein of un 33.2 11 0.00036 33.2 0.5 16 68-83 95-110 (156)
13 1oey_A P67-PHOX, neutrophil cy 30.3 86 0.003 24.6 5.2 56 246-330 6-62 (83)
14 2npt_A Dual specificity mitoge 25.4 1.1E+02 0.0039 25.1 5.2 55 246-327 15-70 (106)
15 2j4m_A Endoglucanase 45A; dock 24.0 17 0.00059 29.8 0.1 12 314-325 21-32 (100)
No 1
>1wmh_B Partitioning defective-6 homolog alpha; kinase, PB1 domain, OPCA motif, APKC, cell polarity, transferase/cell cycle complex; 1.50A {Homo sapiens} SCOP: d.15.2.2
Probab=95.38 E-value=0.03 Score=44.86 Aligned_cols=59 Identities=25% Similarity=0.303 Sum_probs=45.6
Q ss_pred CCcceeEEeecCCccceeeeCCCCCChHHHHHHHHHhhccccccccCCCCCcchhhhhhhhhccCCCCCCeEEEEEeCCC
Q 019963 243 SSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDG 322 (333)
Q Consensus 243 ~~~~fVKV~MDG~PiGRKVDL~~y~sY~eLs~aLekMF~~ftigq~gs~g~~g~e~~~e~~L~dll~gseyvLtYEDkEG 322 (333)
.+..=||..-|+.--=-.+|-....+|++|..-|+++|.. ....|++.|.|.||
T Consensus 4 ~~~l~vKskf~aE~RRFs~d~~~~~~fe~f~~lv~~lh~L--------------------------~~~~f~i~Y~D~dG 57 (86)
T 1wmh_B 4 MSIVEVKSKFDAEFRRFALPRASVSGFQEFSRLLRAVHQI--------------------------PGLDVLLGYTDAHG 57 (86)
T ss_dssp -CEEEEEEEETTEEEEEEEEGGGCCCHHHHHHHHHHHTTC--------------------------TTCCCEEEEECTTS
T ss_pred CCEEEEEeecCCeeeEeEccCCCCCCHHHHHHHHHHHcCC--------------------------CCCCEEEEEECCCC
Confidence 3457788888887433356666778999999999999963 12479999999999
Q ss_pred Ceeec
Q 019963 323 DWMLV 327 (333)
Q Consensus 323 DwMLV 327 (333)
|++-+
T Consensus 58 DLlpI 62 (86)
T 1wmh_B 58 DLLPL 62 (86)
T ss_dssp CEEEC
T ss_pred CEeee
Confidence 99754
No 2
>1vd2_A Protein kinase C, IOTA type; PB1 domain, OPCA motif, APKC, ZIP/P62, MEK5, molecular recognition, transferase; NMR {Homo sapiens} SCOP: d.15.2.2 PDB: 1wmh_A
Probab=95.20 E-value=0.056 Score=43.28 Aligned_cols=57 Identities=21% Similarity=0.266 Sum_probs=44.2
Q ss_pred CcceeEEeecCCccceeeeCCCCCChHHHHHHHHHhhccccccccCCCCCcchhhhhhhhhccCCCCCCeEEEEEeCCCC
Q 019963 244 SALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGD 323 (333)
Q Consensus 244 ~~~fVKV~MDG~PiGRKVDL~~y~sY~eLs~aLekMF~~ftigq~gs~g~~g~e~~~e~~L~dll~gseyvLtYEDkEGD 323 (333)
+.+=|||+-.|.-+ .+.+...-+|++|...|..+|.. ..+..+++.|.|.|||
T Consensus 5 ~~vkvK~~~~gdi~--~~~v~~~i~~~~L~~kv~~~~~~-------------------------~~~~~f~lky~DEeGD 57 (89)
T 1vd2_A 5 SQVRVKAYYRGDIM--ITHFEPSISFEGLCNEVRDMCSF-------------------------DNEQLFTMKWIDEEGD 57 (89)
T ss_dssp SCEEEEEESSSCEE--EEEECTTCCHHHHHHHHHHHTTC-------------------------CSSCCEEEEECCSSSC
T ss_pred CeEEEEEEeCCeEE--EEECCCCCCHHHHHHHHHHHhCC-------------------------CCCCeEEEEEECCCCC
Confidence 35678999999744 44445567999999999999974 1134799999999999
Q ss_pred eeec
Q 019963 324 WMLV 327 (333)
Q Consensus 324 wMLV 327 (333)
+.-+
T Consensus 58 ~iti 61 (89)
T 1vd2_A 58 PCTV 61 (89)
T ss_dssp CEEC
T ss_pred cccc
Confidence 8644
No 3
>2kkc_A Sequestosome-1; P62, PB1, autophagy, ubiquitin-proteasome system, NF-KB signaling, alternative splicing, apoptosis, cytoplasm, differentiation; NMR {Rattus norvegicus} PDB: 2ktr_B
Probab=94.62 E-value=0.045 Score=44.81 Aligned_cols=59 Identities=22% Similarity=0.315 Sum_probs=42.2
Q ss_pred cceeEEeecCC----ccceeeeCCC-----------CCChHHHHHHHHHhhccccccccCCCCCcchhhhhhhhhccCCC
Q 019963 245 ALFVKVSMDGA----PYLRKVDLKN-----------YSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLH 309 (333)
Q Consensus 245 ~~fVKV~MDG~----PiGRKVDL~~-----------y~sY~eLs~aLekMF~~ftigq~gs~g~~g~e~~~e~~L~dll~ 309 (333)
++-||++..|. .==|++=|.. ..+|++|...+.++|.. +.
T Consensus 5 ~~~vKayl~~~~~~~~EiRRF~l~~~~~p~~~~~~~~~s~~~L~~~V~~lFp~-------------------------l~ 59 (102)
T 2kkc_A 5 SLTVKAYLLGKEEAAREIRRFSFCFSPEPEAEAAAGPGPCERLLSRVAVLFPA-------------------------LR 59 (102)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEESSSCSCSSSCCSCCHHHHHHHHHHHHCTT-------------------------SC
T ss_pred eEEEEEEEccCCCCCCceEEEEeccCCCcccccccccccHHHHHHHHHHHccc-------------------------cC
Confidence 46788888752 2335554431 24899999999999963 12
Q ss_pred CCCeEEEEEeCCCCeeecc
Q 019963 310 GSEFVLTYEDKDGDWMLVG 328 (333)
Q Consensus 310 gseyvLtYEDkEGDwMLVG 328 (333)
+..|.|.|.|.|||+.-+-
T Consensus 60 ~~~f~l~Y~DedGDlItiS 78 (102)
T 2kkc_A 60 PGGFQAHYRAERGDLVAFS 78 (102)
T ss_dssp SSCEEEEEECTTCCEEEEC
T ss_pred CCcEEEEEECCCCCEEEec
Confidence 4589999999999987543
No 4
>2ktr_A Sequestosome-1; autophagy, NF-KB signaling, HOMO-oligomer, PB1 dimer, signaling protein, transport protein; NMR {Rattus norvegicus}
Probab=93.44 E-value=0.12 Score=43.35 Aligned_cols=59 Identities=22% Similarity=0.327 Sum_probs=42.5
Q ss_pred CcceeEEeecCC----ccceeeeCC-----------CCCChHHHHHHHHHhhccccccccCCCCCcchhhhhhhhhccCC
Q 019963 244 SALFVKVSMDGA----PYLRKVDLK-----------NYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLL 308 (333)
Q Consensus 244 ~~~fVKV~MDG~----PiGRKVDL~-----------~y~sY~eLs~aLekMF~~ftigq~gs~g~~g~e~~~e~~L~dll 308 (333)
..+-||++..|. .==|++=|. .-.+|+.|...+.++|.. +
T Consensus 19 ~~l~vKayl~~~~~~~~EIRRF~l~~~~~p~~~~~~~~~s~~~L~~kV~~lFp~-------------------------L 73 (117)
T 2ktr_A 19 GSLTVKAYLLGKEEAAREIRRFSFCFSPEPEAEAAAGPGPSERLLSRVAVLFPA-------------------------L 73 (117)
T ss_dssp -CEEEEEEEECSSSCEEEEEEEEECSSSCSCSSSCCSCCHHHHHHHHHHHHCTT-------------------------S
T ss_pred ccEEEEEEEecCCCCCCcEEEEEeccCCCccccccccCCCHHHHHHHHHHHccc-------------------------c
Confidence 457899998752 123555443 245999999999999963 1
Q ss_pred CCCCeEEEEEeCCCCeeec
Q 019963 309 HGSEFVLTYEDKDGDWMLV 327 (333)
Q Consensus 309 ~gseyvLtYEDkEGDwMLV 327 (333)
.+..|.|.|.|.|||+.-+
T Consensus 74 ~~~~f~l~YkDEdGDlItI 92 (117)
T 2ktr_A 74 RPGGFQAHYRAERGDLVAF 92 (117)
T ss_dssp CSSCEEEEEECTTCCEEEE
T ss_pred CCCcEEEEEECCCCCEEEe
Confidence 2457999999999998754
No 5
>1q1o_A Cell division control protein 24; PB1 domain, PCCR, PC motif, OPCA motif, yeast, cell polarity, protein-protein interaction; NMR {Saccharomyces cerevisiae} SCOP: d.15.2.2 PDB: 2kfj_A 2kfk_B
Probab=82.95 E-value=2.8 Score=34.18 Aligned_cols=65 Identities=15% Similarity=0.398 Sum_probs=46.2
Q ss_pred CcceeEEeecCCc----c--ceeeeCCCCCChHHHHHHHHHhhccccccccCCCCCcchhhhhhhhhccCCCCCCeEEEE
Q 019963 244 SALFVKVSMDGAP----Y--LRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTY 317 (333)
Q Consensus 244 ~~~fVKV~MDG~P----i--GRKVDL~~y~sY~eLs~aLekMF~~ftigq~gs~g~~g~e~~~e~~L~dll~gseyvLtY 317 (333)
++.-|||+-+..- + .|.|=+..--+|++|...+.+-|..++ . + +. .....|-|
T Consensus 4 ~sikVKv~y~~~~~~~~~~d~~~i~V~~~i~f~~L~~kI~~Kl~~~~------~-----~--------~i--~~~~klkY 62 (98)
T 1q1o_A 4 GSILFRISYNNNSNNTSSSEIFTLLVEKVWNFDDLIMAINSKISNTH------N-----N--------NI--SPITKIKY 62 (98)
T ss_dssp SCEEEEEEECSSCSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHC------S-----S--------CC--CCCCCEEE
T ss_pred ccEEEEEEecCcccccccCcEEEEEecCCCCHHHHHHHHHHHHcCCc------c-----c--------cc--cceeEEEE
Confidence 4567888877421 2 366667788899999999999997521 0 0 00 12468999
Q ss_pred EeCCCCeeeccc
Q 019963 318 EDKDGDWMLVGD 329 (333)
Q Consensus 318 EDkEGDwMLVGD 329 (333)
.|.|||+...++
T Consensus 63 kDEdGD~Vtl~s 74 (98)
T 1q1o_A 63 QDEDGDFVVLGS 74 (98)
T ss_dssp ECSSSCEEEECS
T ss_pred EcCCCCEEEEcC
Confidence 999999988776
No 6
>2bkf_A Zinc-finger protein NBR1 (NEXT to breast cancer 1; PB1 domain, interaction domain, Z finger; 1.56A {Homo sapiens} SCOP: d.15.2.2 PDB: 2g4s_A
Probab=78.97 E-value=3.9 Score=32.80 Aligned_cols=54 Identities=9% Similarity=0.202 Sum_probs=41.2
Q ss_pred ceeEEeecCCccceeeeCCCCCChHHHHHHHHHhhccccccccCCCCCcchhhhhhhhhccCCCCCCeEEEEEeCCCCee
Q 019963 246 LFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWM 325 (333)
Q Consensus 246 ~fVKV~MDG~PiGRKVDL~~y~sY~eLs~aLekMF~~ftigq~gs~g~~g~e~~~e~~L~dll~gseyvLtYEDkEGDwM 325 (333)
.-+||+-.|...=--|.-..-.++++|-..+..+|.. +.++|.|-|.|||-.
T Consensus 7 v~lkV~f~ge~~rf~vs~~~~~tweel~~mvk~~f~L----------------------------~~~~ikY~DEenD~v 58 (87)
T 2bkf_A 7 VTLNVTFKNEIQSFLVSDPENTTWADIEAMVKVSFDL----------------------------NTIQIKYLDEENEEV 58 (87)
T ss_dssp EEEEEEETTEEEEEEESCGGGCCHHHHHHHHHHHHTC----------------------------SSEEEEEECTTSCEE
T ss_pred EEEEEEEcCCeeEEEeccCCCCCHHHHHHHHHHHcCC----------------------------CceEEEEEcCCCCEE
Confidence 4578999998544446444477899999999999963 267999999999976
Q ss_pred ec
Q 019963 326 LV 327 (333)
Q Consensus 326 LV 327 (333)
-|
T Consensus 59 ~i 60 (87)
T 2bkf_A 59 SI 60 (87)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 7
>1oey_J P40-PHOX, neutrophil cytosol factor 4; immune system, PB1 heterodimer/complex, NADPH oxidase, PB1 D heterodimerization; 2.0A {Homo sapiens} SCOP: d.15.2.2
Probab=76.93 E-value=3.6 Score=34.26 Aligned_cols=38 Identities=24% Similarity=0.453 Sum_probs=31.9
Q ss_pred eCCCCCChHHHHHHHHHhhccccccccCCCCCcchhhhhhhhhccCCCCCCeEEEEEeCCCCeeec
Q 019963 262 DLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLV 327 (333)
Q Consensus 262 DL~~y~sY~eLs~aLekMF~~ftigq~gs~g~~g~e~~~e~~L~dll~gseyvLtYEDkEGDwMLV 327 (333)
||...-.|.+|..-..+-|.. .+-+|-|.|.||||.-+
T Consensus 28 dl~~~P~ykdLl~lmr~~F~~----------------------------~DIaLNYrD~eGDLIri 65 (107)
T 1oey_J 28 DLSSTPLLKDLLELTRREFQR----------------------------EDIALNYRDAEGDLVRL 65 (107)
T ss_dssp CTTCCCCHHHHHHHHHHHHCC----------------------------SSEEEEEECTTSCEEEC
T ss_pred ccccCCCHHHHHHHHHHHhcc----------------------------cceeeeeecCCCCEEEE
Confidence 678888999999999999963 15589999999999754
No 8
>1wj6_A KIAA0049 protein, RSGI RUH-024; PB1 domain, protein binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: d.15.2.2
Probab=76.92 E-value=3.9 Score=33.68 Aligned_cols=54 Identities=9% Similarity=0.202 Sum_probs=42.1
Q ss_pred ceeEEeecCCccceeeeCCCCCChHHHHHHHHHhhccccccccCCCCCcchhhhhhhhhccCCCCCCeEEEEEeCCCCee
Q 019963 246 LFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWM 325 (333)
Q Consensus 246 ~fVKV~MDG~PiGRKVDL~~y~sY~eLs~aLekMF~~ftigq~gs~g~~g~e~~~e~~L~dll~gseyvLtYEDkEGDwM 325 (333)
.-+||+-.|...=--|.-..--.+++|-..|..+|.. +.++|.|-|.|||-.
T Consensus 15 v~lkV~f~ge~~rF~Vs~~~~~tweel~~mvk~~f~L----------------------------~~~~IkY~DEenD~V 66 (101)
T 1wj6_A 15 VTLNVTFKNEIQSFLVSDPENTTWADIEAMVKVSFDL----------------------------NTIQIKYLDEENEEV 66 (101)
T ss_dssp EEEEEEETTEEEEEEESCTTTSCHHHHHHHHHHHHCC----------------------------SSBCCEEECTTSCEE
T ss_pred EEEEEEEcCCeeEEEecCCCCCCHHHHHHHHHHHcCC----------------------------CceEEEEecCCCCEE
Confidence 5689999998554457555578899999999999963 267999999999975
Q ss_pred ec
Q 019963 326 LV 327 (333)
Q Consensus 326 LV 327 (333)
-|
T Consensus 67 ~i 68 (101)
T 1wj6_A 67 SI 68 (101)
T ss_dssp CC
T ss_pred EE
Confidence 43
No 9
>1e8p_A Endoglucanase, dockerin; cellulose docking domain, cellulase; NMR {Piromyces equi} SCOP: g.55.1.1 PDB: 1e8q_A
Probab=50.83 E-value=4.9 Score=28.98 Aligned_cols=13 Identities=31% Similarity=0.833 Sum_probs=11.2
Q ss_pred EEEEEeCCCCeee
Q 019963 314 VLTYEDKDGDWML 326 (333)
Q Consensus 314 vLtYEDkEGDwML 326 (333)
.++|+|.||||=.
T Consensus 20 ~V~YtD~dG~WGV 32 (46)
T 1e8p_A 20 KVEYTDASGQWGV 32 (46)
T ss_dssp CEEEEETTEEEEE
T ss_pred eEEEEcCCCcccc
Confidence 5999999999953
No 10
>1pqs_A Cell division control protein 24; alpha and beta protein, cell cycle; NMR {Saccharomyces cerevisiae} SCOP: d.15.2.2 PDB: 1tz1_A
Probab=49.42 E-value=21 Score=27.54 Aligned_cols=48 Identities=19% Similarity=0.399 Sum_probs=33.5
Q ss_pred eeCCCCCChHHHHHHHHHhhccccccccCCCCCcchhhhhhhhhccCCCCCCeEEEEEeCCCCeeeccc
Q 019963 261 VDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGD 329 (333)
Q Consensus 261 VDL~~y~sY~eLs~aLekMF~~ftigq~gs~g~~g~e~~~e~~L~dll~gseyvLtYEDkEGDwMLVGD 329 (333)
|=...--+|++|...+.+-|..+. +.+. .....|-|.|.|||+.-.++
T Consensus 6 i~V~~~i~f~~L~~kI~~kl~~~~-----~~~~----------------~~~~~lkYkDEdGD~Vti~s 53 (77)
T 1pqs_A 6 LLVEKVWNFDDLIMAINSKISNTH-----NNNI----------------SPITKIKYQDEDGDFVVLGS 53 (77)
T ss_dssp EECTTCCCSHHHHHHHHHHTTTTT-----SSCS----------------CSTTCCEEEETTTEEEECCS
T ss_pred EEeCCCCCHHHHHHHHHHHHcccc-----cccc----------------cceeEEEEEcCCCCEEEEcC
Confidence 334455689999999999887420 0000 13568999999999987765
No 11
>3o27_A Putative uncharacterized protein; swapped-hairpin fold, transcription factor, DNA binding PROT; 2.80A {Sulfolobus islandicus}
Probab=38.15 E-value=20 Score=27.68 Aligned_cols=22 Identities=41% Similarity=0.693 Sum_probs=18.1
Q ss_pred cCCCCCCeEEEEEeCCCCeeec
Q 019963 306 DLLHGSEFVLTYEDKDGDWMLV 327 (333)
Q Consensus 306 dll~gseyvLtYEDkEGDwMLV 327 (333)
++..|.+|.+++||++|+.+|+
T Consensus 38 gIk~gD~fel~ve~kdgeIvLc 59 (68)
T 3o27_A 38 DIKPDDTFILNMEQKDGDIVLS 59 (68)
T ss_dssp TCCTTCCEEEEEEEETTEEEEE
T ss_pred CCCCCCEEEEEEecCCCeEEEE
Confidence 4445679999999999999875
No 12
>3brc_A Conserved protein of unknown function; methanobacterium thermoautotrophicum, STR genomics, MCSG, PSI-2; 1.60A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=33.22 E-value=11 Score=33.19 Aligned_cols=16 Identities=50% Similarity=0.729 Sum_probs=11.7
Q ss_pred CccccccccCCCCCCC
Q 019963 68 NLKATELRLGLPGSQS 83 (333)
Q Consensus 68 nlk~TELRLGLPGs~s 83 (333)
||=-.-=|||.|||.|
T Consensus 95 DlvIARGRLGvPGSGS 110 (156)
T 3brc_A 95 DLVIARGRLGVPGSGS 110 (156)
T ss_dssp SEEEEEEECSSTTSCE
T ss_pred cEEEEcccccCCCCcc
Confidence 4444455999999986
No 13
>1oey_A P67-PHOX, neutrophil cytosol factor 2; immune system, PB1 heterodimer/complex, NADPH oxidase, PB1 D heterodimerization; 2.0A {Homo sapiens} SCOP: d.15.2.2
Probab=30.31 E-value=86 Score=24.55 Aligned_cols=56 Identities=13% Similarity=0.158 Sum_probs=40.8
Q ss_pred ceeEEeecCCccceeeeCCCCCChHHHHHHHHHhhccccccccCCCCCcchhhhhhhhhccCCCCCCeEEEEEe-CCCCe
Q 019963 246 LFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYED-KDGDW 324 (333)
Q Consensus 246 ~fVKV~MDG~PiGRKVDL~~y~sY~eLs~aLekMF~~ftigq~gs~g~~g~e~~~e~~L~dll~gseyvLtYED-kEGDw 324 (333)
.=|||+-. +.-.|....=-+|.+|...|.+=+..- +.+-+|-|.| .+|.|
T Consensus 6 ~~VKV~~~---~tvairvp~~~~y~~L~~~l~~kL~l~--------------------------~~~~~LsYk~~~s~~~ 56 (83)
T 1oey_A 6 YTLKVHYK---YTVVMKTQPGLPYSQVRDMVSKKLELR--------------------------LEHTKLSYRPRDSNEL 56 (83)
T ss_dssp EEEEEESS---SEEEEEECTTCCHHHHHHHHHHHTTCC--------------------------GGGCCEEECCTTCSSC
T ss_pred EEEEEEEE---EEEEEECCCCCCHHHHHHHHHHHhCCC--------------------------cceeEEEeeCCCCCCe
Confidence 45677766 788888888899999999999888530 0123678888 56777
Q ss_pred eecccC
Q 019963 325 MLVGDV 330 (333)
Q Consensus 325 MLVGDV 330 (333)
++.+|-
T Consensus 57 vi~~d~ 62 (83)
T 1oey_A 57 VPLSED 62 (83)
T ss_dssp EECCTT
T ss_pred eccChH
Confidence 777764
No 14
>2npt_A Dual specificity mitogen-activated protein kinase; MAP2K5, MEK5, MKK PRKMK5, MAP kinase kinase 5, PHOX, PHOX-domain; 1.75A {Homo sapiens} SCOP: d.15.2.2 PDB: 2o2v_A 1wi0_A
Probab=25.45 E-value=1.1e+02 Score=25.11 Aligned_cols=55 Identities=18% Similarity=0.326 Sum_probs=37.1
Q ss_pred ceeEEeec-CCccceeeeCCCCCChHHHHHHHHHhhccccccccCCCCCcchhhhhhhhhccCCCCCCeEEEEEeCCCCe
Q 019963 246 LFVKVSMD-GAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDW 324 (333)
Q Consensus 246 ~fVKV~MD-G~PiGRKVDL~~y~sY~eLs~aLekMF~~ftigq~gs~g~~g~e~~~e~~L~dll~gseyvLtYEDkEGDw 324 (333)
.-+.+... |-.+--.||-..+=++.+|..++.+..-.-| --..-|||.|||+
T Consensus 15 lVIRIk~p~~g~vDwaV~~~~~L~FrDvL~~I~~vmP~aT---------------------------~TAFeYEDE~gDR 67 (106)
T 2npt_A 15 LVIRIKIPNSGAVDWTVHSGPQLLFRDVLDVIGQVLPEAT---------------------------TTAFEYEDEDGDR 67 (106)
T ss_dssp EEEEEEETTTEEEEEEECC--CCCHHHHHHHHHHHSTTSC---------------------------CSEEEEECTTSCE
T ss_pred eEEEEECCCCCccccccCCcccccHHHHHHHHHHhCccce---------------------------eeeeeeccccCCe
Confidence 34445544 5557777777777899999999887764311 2256799999999
Q ss_pred eec
Q 019963 325 MLV 327 (333)
Q Consensus 325 MLV 327 (333)
.-|
T Consensus 68 ITV 70 (106)
T 2npt_A 68 ITV 70 (106)
T ss_dssp EEE
T ss_pred eEE
Confidence 876
No 15
>2j4m_A Endoglucanase 45A; dockerin, cellulosome, protein binding, small cysteine-rich; NMR {Piromyces equi} PDB: 2j4n_A
Probab=23.96 E-value=17 Score=29.84 Aligned_cols=12 Identities=33% Similarity=0.853 Sum_probs=10.7
Q ss_pred EEEEEeCCCCee
Q 019963 314 VLTYEDKDGDWM 325 (333)
Q Consensus 314 vLtYEDkEGDwM 325 (333)
.++|.|.||||=
T Consensus 21 ~V~YtD~dG~WG 32 (100)
T 2j4m_A 21 KVEYTDASGQWG 32 (100)
T ss_dssp CCCEESSSCEEE
T ss_pred eEEEEcCCCccc
Confidence 689999999994
Done!