Query 019965
Match_columns 333
No_of_seqs 139 out of 1135
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 09:45:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019965.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019965hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oox_A Putative 2OG-Fe(II) oxy 100.0 1E-75 3.5E-80 543.1 30.5 297 14-324 4-309 (312)
2 1odm_A Isopenicillin N synthas 100.0 9.9E-73 3.4E-77 526.9 30.8 303 9-328 1-328 (331)
3 1gp6_A Leucoanthocyanidin diox 100.0 4.5E-72 1.6E-76 526.8 30.1 290 15-327 45-348 (356)
4 1w9y_A 1-aminocyclopropane-1-c 100.0 5.3E-72 1.8E-76 518.7 20.0 283 15-326 2-295 (319)
5 1dcs_A Deacetoxycephalosporin 100.0 1.4E-70 4.8E-75 508.0 16.4 280 14-328 2-309 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 7.9E-67 2.7E-71 475.8 27.0 265 15-324 2-277 (280)
7 2hbt_A EGL nine homolog 1; pro 95.8 0.86 3E-05 39.6 17.7 82 186-287 119-213 (247)
8 3dkq_A PKHD-type hydroxylase S 94.0 0.13 4.4E-06 44.8 7.3 77 185-286 100-194 (243)
9 2rg4_A Uncharacterized protein 93.3 1.8 6.1E-05 36.7 13.2 73 205-289 116-209 (216)
10 3s57_A Alpha-ketoglutarate-dep 90.2 1.8 6.3E-05 36.4 9.6 84 186-285 102-201 (204)
11 2iuw_A Alkylated repair protei 90.1 2.1 7.2E-05 36.9 10.2 86 186-287 128-230 (238)
12 3itq_A Prolyl 4-hydroxylase, a 87.9 3.6 0.00012 34.9 9.8 103 157-287 94-212 (216)
13 3i3q_A Alpha-ketoglutarate-dep 86.8 7.9 0.00027 32.6 11.3 80 186-285 107-201 (211)
14 2jig_A Prolyl-4 hydroxylase; h 84.4 4.4 0.00015 34.3 8.7 47 238-288 170-218 (224)
15 3tht_A Alkylated DNA repair pr 77.3 8.1 0.00028 35.2 8.2 103 185-301 199-326 (345)
16 2opi_A L-fuculose-1-phosphate 64.9 3.6 0.00012 34.6 2.7 36 16-51 125-160 (212)
17 1e4c_P L-fuculose 1-phosphate 59.6 5.2 0.00018 33.7 2.8 36 16-51 122-157 (215)
18 2fk5_A Fuculose-1-phosphate al 59.4 5.8 0.0002 33.0 3.0 36 16-51 117-153 (200)
19 1pvt_A Sugar-phosphate aldolas 58.4 6.3 0.00022 33.7 3.2 37 15-51 160-196 (238)
20 4ay7_A Methylcobalamin\: coenz 53.4 22 0.00074 32.1 6.1 44 25-68 301-348 (348)
21 2v9l_A Rhamnulose-1-phosphate 52.9 7.2 0.00025 34.2 2.6 36 16-51 179-214 (274)
22 2irp_A Putative aldolase class 52.1 7.7 0.00026 32.4 2.6 36 15-51 138-176 (208)
23 1otj_A Alpha-ketoglutarate-dep 47.5 22 0.00074 30.9 4.9 51 14-67 15-65 (283)
24 1oih_A Putative alkylsulfatase 44.3 27 0.00091 30.7 5.0 51 15-68 26-77 (301)
25 3ocr_A Class II aldolase/adduc 40.6 16 0.00056 31.9 2.9 36 16-51 156-192 (273)
26 1m5a_B Insulin B chain; alpha 39.1 34 0.0012 19.1 3.0 19 27-45 8-26 (30)
27 3o2g_A Gamma-butyrobetaine dio 38.1 20 0.00067 33.1 3.2 51 16-69 122-173 (388)
28 3pvj_A Alpha-ketoglutarate-dep 34.2 32 0.0011 30.0 3.8 52 14-68 13-64 (277)
29 3r1j_A Alpha-ketoglutarate-dep 33.9 40 0.0014 29.8 4.4 53 14-69 19-72 (301)
30 3m4r_A Uncharacterized protein 33.3 21 0.00073 30.1 2.4 34 17-51 156-190 (222)
31 2dbn_A Hypothetical protein YB 31.2 21 0.0007 33.7 2.1 56 12-68 96-151 (461)
32 2da7_A Zinc finger homeobox pr 27.4 26 0.0009 23.9 1.5 38 137-174 13-50 (71)
33 2x4k_A 4-oxalocrotonate tautom 27.0 60 0.002 20.4 3.4 25 150-174 18-42 (63)
34 3ijp_A DHPR, dihydrodipicolina 24.4 80 0.0027 27.7 4.6 16 154-169 186-201 (288)
35 4f3y_A DHPR, dihydrodipicolina 24.3 79 0.0027 27.4 4.5 16 154-169 171-186 (272)
36 2z7b_A MLR6791 protein; class 23.9 38 0.0013 29.4 2.4 36 16-51 157-201 (270)
37 3qy9_A DHPR, dihydrodipicolina 23.7 1E+02 0.0036 26.2 5.1 42 27-68 87-128 (243)
38 3abf_A 4-oxalocrotonate tautom 22.2 87 0.003 19.8 3.5 24 151-174 17-40 (64)
39 3eat_X Pyoverdine biosynthesis 20.2 59 0.002 28.4 2.9 52 15-69 29-82 (293)
No 1
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=1e-75 Score=543.08 Aligned_cols=297 Identities=30% Similarity=0.504 Sum_probs=263.8
Q ss_pred CCcccEEeCCC--cchHHHHHHHHHHhhhcCEEEEEccCCCHHHHHHHHHHHHHHhCCCHHHHhhhccC-CCCCcccccC
Q 019965 14 HTVLHCIDLSS--PDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRN-EKHRGYTPLH 90 (333)
Q Consensus 14 ~~~iPvIDl~~--~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~GY~~~~ 90 (333)
..+||||||+. .++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ..++||++.+
T Consensus 4 ~~~iPvIDls~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~g 83 (312)
T 3oox_A 4 TSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYIPFG 83 (312)
T ss_dssp CCSSCCEETHHHHHCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEECCC
T ss_pred CCCCCeEEChHhcccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCcccccccc
Confidence 46899999963 35778999999999999999999999999999999999999999999999998874 6689999988
Q ss_pred cccccCCCCCCCCceEEEEecccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 019965 91 DELLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALALDLNA 170 (333)
Q Consensus 91 ~e~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~ 170 (333)
.|..... ...|++|.|+++.+.+.+++. .....+|.||+. +|+||+.+++|+++|.+++.+|+++|+++||+++
T Consensus 84 ~e~~~~~--~~~D~kE~~~~~~~~~~~~~~--~~~~~~n~wP~~--~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~ 157 (312)
T 3oox_A 84 VETAKGA--DHYDLKEFWHMGRDLPPGHRF--RAHMADNVWPAE--IPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLER 157 (312)
T ss_dssp CCCSTTS--CSCCCCEEEEECCCCCTTCGG--GGTSCCCCCCTT--STTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCT
T ss_pred ceecCCC--CCCCceeeeEeecCCCcCCcc--hhccCCCCCCCc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCH
Confidence 8866432 457999999997543333221 123567999987 7999999999999999999999999999999999
Q ss_pred cccCCccccCccceeeeeeecCCCCCCCCCCcceeeecccCCceEEEeeCCCCceeEEeCCCCCCCCeEEecCCCCeEEE
Q 019965 171 DFFDKPEILGEPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYVPPLKGAFIV 250 (333)
Q Consensus 171 ~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~~~lTlL~~d~~~GLqV~~~~~~~~g~W~~v~~~~~~~iV 250 (333)
++|. +.+..+.+.||++||||++.. + ..+|+++|||+|+||||+||+++||||+.++ |+|++|+|.||++||
T Consensus 158 ~~f~--~~~~~~~~~lr~~~Ypp~~~~-~-~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~----g~W~~V~p~pg~~vV 229 (312)
T 3oox_A 158 DFFK--PTVQDGNSVLRLLHYPPIPKD-A-TGVRAGAHGDINTITLLLGAEEGGLEVLDRD----GQWLPINPPPGCLVI 229 (312)
T ss_dssp TTTH--HHHTTCCCEEEEEEECCCSSC-C-C--CEEEECCCSSEEEEECCTTSCEEEECTT----SCEEECCCCSSCEEE
T ss_pred HHHH--HHhcCCcceeeeEecCCCCCC-c-CCcCccceecCceEEEEeEcCcCceEEECCC----CcEEECCCCCCeEEE
Confidence 9999 888888899999999999864 2 3399999999999999999999999999876 679999999999999
Q ss_pred EcchhhHHhhCCccccccceecCC-----CCCceeeEEeecCCCCceeecCCCccCCCCCCCCC-CcCHHHHHHHHHHhh
Q 019965 251 NLGDMLERWSNCVFKSTLHRVLGN-----GRERYSIAYFVEPSHDCVVECLPTCKSEKNPPKFP-PVKYGSYLSQRYKDT 324 (333)
Q Consensus 251 niGd~l~~~TnG~~ks~~HRV~~~-----~~~R~S~~~F~~p~~~~~i~p~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~ 324 (333)
||||+||+||||+|||++|||+++ +.+|||++||++|+.|++|.|+++|+++++|++|+ ++|++||+..|+++.
T Consensus 230 NiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~~ 309 (312)
T 3oox_A 230 NIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLREI 309 (312)
T ss_dssp EECHHHHHHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHHH
T ss_pred EhHHHHHHHhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHHh
Confidence 999999999999999999999974 45799999999999999999999999999999999 999999999999854
No 2
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=9.9e-73 Score=526.89 Aligned_cols=303 Identities=23% Similarity=0.397 Sum_probs=263.4
Q ss_pred cCCCCCCcccEEeCCC------cchHHHHHHHHHHhhhcCEEEEEccCCCHHHHHHHHHHHHHH-hCCCHHHHhhhccCC
Q 019965 9 IGSKAHTVLHCIDLSS------PDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRF-FNLPLNEKIKVLRNE 81 (333)
Q Consensus 9 ~~~~~~~~iPvIDl~~------~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~f-F~lp~e~K~~~~~~~ 81 (333)
|+|....+||||||+. ..+.+++++|.+||++||||||+|||| +++++++.+++| |+||.|+|+++..
T Consensus 1 m~s~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~-- 75 (331)
T 1odm_A 1 MGSVSKANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI-- 75 (331)
T ss_dssp --CCCBCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC--
T ss_pred CCcccCCCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh--
Confidence 6677778899999963 245678999999999999999999999 999999999999 9999999999875
Q ss_pred CCCcccccCcccccCC----CCCCCCceEEEEecccCCCCCCC--CCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHH
Q 019965 82 KHRGYTPLHDELLDPD----TQVHGDYKEGYYIGVEVPEGDPE--SEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVA 155 (333)
Q Consensus 82 ~~~GY~~~~~e~~~~~----~~~~~d~~E~~~~~~~~~~~~~~--~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~ 155 (333)
+||++.+.+.+..+ .....|++|.|+++.+.+.++|. .......+|.||+.+.+|+|++.+++|+++|.+++
T Consensus 76 --~Gy~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~ 153 (331)
T 1odm_A 76 --RAYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLS 153 (331)
T ss_dssp --TTTCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHH
T ss_pred --cCCCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence 79998887754321 01357999999998653333221 12234568999986446999999999999999999
Q ss_pred HHHHHHHHHhcCCCccccCCccccCccceeee--eeecC------C---CCCCCCCC-cceeeecccCCceEEEeeCCCC
Q 019965 156 KVVARIIALALDLNADFFDKPEILGEPIATLR--LLHYE------G---QTSDPSKG-IYGAGAHSDFGLITLLATDEVL 223 (333)
Q Consensus 156 ~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~lr--~~~Yp------~---~~~~~~~~-~~~~~~HtD~~~lTlL~~d~~~ 223 (333)
.+|+++|+++||+++++|. +.+..+.+.|| ++||| | |+. ++. .+|+++|||+|+||||+||.++
T Consensus 154 ~~ll~~la~~Lgl~~~~f~--~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~--~~~~~~g~~~HtD~g~lTlL~qd~v~ 229 (331)
T 1odm_A 154 SALLKGYALALGKEENFFA--RHFKPDDTLASVVLIRYPYLDPYPEAAIKTA--ADGTKLSFEWHEDVSLITVLYQSNVQ 229 (331)
T ss_dssp HHHHHHHHHHTTSCTTTTG--GGCCTTTCCCEEEEEEECCCSSCCGGGCEEC--TTSCEEEEEEECCSSSEEEEEECSSC
T ss_pred HHHHHHHHHHhCCCHHHHH--HHhcCcHHHHHHHHhhCCCcccccccccCCC--ccccccccccccCCCeEEEEeeCCCC
Confidence 9999999999999999999 88888899999 99999 7 543 333 8999999999999999999999
Q ss_pred ceeEEeCCCCCCCCeEEecCCCCeEEEEcchhhHHhhCCccccccceecCCCCCceeeEEeecCCCCceeecCCCccCCC
Q 019965 224 GLQICKDKDAKPQIWEYVPPLKGAFIVNLGDMLERWSNCVFKSTLHRVLGNGRERYSIAYFVEPSHDCVVECLPTCKSEK 303 (333)
Q Consensus 224 GLqV~~~~~~~~g~W~~v~~~~~~~iVniGd~l~~~TnG~~ks~~HRV~~~~~~R~S~~~F~~p~~~~~i~p~~~~~~~~ 303 (333)
||||++++ | |++|+|.||++||||||+||+||||+|||++|||++++.+|||++||++|+.|++|.|++++++++
T Consensus 230 GLQV~~~~----g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~R~Sia~F~~P~~d~~i~pl~~~~~~~ 304 (331)
T 1odm_A 230 NLQVETAA----G-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWVNAERQSLPFFVNLGYDSVIDPFDPREPNG 304 (331)
T ss_dssp CEEEEETT----E-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEECCCSCEEEEEEEECCCTTCBCCCCCTTSTTC
T ss_pred CEEEEcCC----C-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCCCCCCEEEEEEEEcCCCCCEEeCCCcccccc
Confidence 99999886 7 999999999999999999999999999999999998888999999999999999999999998877
Q ss_pred CCCCCCCcCHHHHHHHHHHhhhccc
Q 019965 304 NPPKFPPVKYGSYLSQRYKDTHADL 328 (333)
Q Consensus 304 ~~~~~~~~~~~e~~~~~~~~~~~~~ 328 (333)
+ ++|+++|++||+..++++.+...
T Consensus 305 ~-~~y~~~t~~e~l~~~~~~~~~~~ 328 (331)
T 1odm_A 305 K-SDREPLSYGDYLQNGLVSLINKN 328 (331)
T ss_dssp C-CSSCCCBHHHHHHHHHHHHHHHH
T ss_pred c-cCCCCccHHHHHHHHHHHHHHhc
Confidence 7 89999999999999999887654
No 3
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=4.5e-72 Score=526.78 Aligned_cols=290 Identities=26% Similarity=0.423 Sum_probs=257.9
Q ss_pred CcccEEeCCC------cchHHHHHHHHHHhhhcCEEEEEccCCCHHHHHHHHHHHHHHhCCCHHHHhhhccC---CCCCc
Q 019965 15 TVLHCIDLSS------PDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRN---EKHRG 85 (333)
Q Consensus 15 ~~iPvIDl~~------~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~---~~~~G 85 (333)
.+||||||+. ..+.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ..++|
T Consensus 45 ~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~G 124 (356)
T 1gp6_A 45 PQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQG 124 (356)
T ss_dssp CCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSE
T ss_pred CCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccc
Confidence 3699999963 12567899999999999999999999999999999999999999999999998765 25789
Q ss_pred ccccCcccccCCCCCCCCceEEEEecccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 019965 86 YTPLHDELLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALA 165 (333)
Q Consensus 86 Y~~~~~e~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~ 165 (333)
|...+.+.. .+..||+|.|+++.. |.. ...+|.||+. +|+|++.+++|+++|.+++.+||++|+++
T Consensus 125 y~~~~~~~~----~~~~d~kE~~~~~~~-p~~-------~~~~~~wP~~--~~~fr~~~~~y~~~~~~l~~~ll~~la~~ 190 (356)
T 1gp6_A 125 YGSKLANNA----SGQLEWEDYFFHLAY-PEE-------KRDLSIWPKT--PSDYIEATSEYAKCLRLLATKVFKALSVG 190 (356)
T ss_dssp EECCCCCST----TCCCCSCEEEEEEEE-SGG-------GCCGGGSCCS--STTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcCcccCC----CCCCChhheeeeecC-Ccc-------ccccccCCCc--chhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 987654321 246799999999853 221 1467899986 79999999999999999999999999999
Q ss_pred cCCCccccCCccccC---ccceeeeeeecCCCCCCCCCCcceeeecccCCceEEEeeCCCCceeEEeCCCCCCCCeEEec
Q 019965 166 LDLNADFFDKPEILG---EPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYVP 242 (333)
Q Consensus 166 Lgl~~~~~~~~~~~~---~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~~~lTlL~~d~~~GLqV~~~~~~~~g~W~~v~ 242 (333)
||+++++|. +.+. .+.+.||++|||||+. ++..+|+++|||+|+||||+||.++||||+.. |+|++|+
T Consensus 191 Lgl~~~~f~--~~~~~~~~~~~~lrl~~YPp~~~--~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~~-----g~Wi~V~ 261 (356)
T 1gp6_A 191 LGLEPDRLE--KEVGGLEELLLQMKINYYPKCPQ--PELALGVEAHTDVSALTFILHNMVPGLQLFYE-----GKWVTAK 261 (356)
T ss_dssp TTSCTTHHH--HHTTHHHHCEEEEEEEEECCCSS--TTTCCSEEEECCCSSEEEEEECSCCCEEEEET-----TEEEECC
T ss_pred cCCCHHHHH--HHhcccCCccceeeeeecCCCCC--cccccCcCCccCCCeEEEEEEcCCCCeEEecC-----CcEEECc
Confidence 999999998 7776 4788999999999986 45689999999999999999999999999963 5699999
Q ss_pred CCCCeEEEEcchhhHHhhCCccccccceecC-CCCCceeeEEeecCCCCc-eeecCCCccCCCCCCCCCCcCHHHHHHHH
Q 019965 243 PLKGAFIVNLGDMLERWSNCVFKSTLHRVLG-NGRERYSIAYFVEPSHDC-VVECLPTCKSEKNPPKFPPVKYGSYLSQR 320 (333)
Q Consensus 243 ~~~~~~iVniGd~l~~~TnG~~ks~~HRV~~-~~~~R~S~~~F~~p~~~~-~i~p~~~~~~~~~~~~~~~~~~~e~~~~~ 320 (333)
|.||++||||||+||+||||+|||++|||+. ++.+|||++||++|+.++ +|.|+++++++++|++|+++|++||+..+
T Consensus 262 p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~~~~~~p~~y~~~t~~eyl~~~ 341 (356)
T 1gp6_A 262 CVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHK 341 (356)
T ss_dssp CCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCSSSCCSSCCEEHHHHHHHH
T ss_pred CCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhhcCCCCCccCCCccHHHHHHHH
Confidence 9999999999999999999999999999997 677999999999999999 99999999998899999999999999999
Q ss_pred HHhhhcc
Q 019965 321 YKDTHAD 327 (333)
Q Consensus 321 ~~~~~~~ 327 (333)
+.+.+..
T Consensus 342 ~~~~~d~ 348 (356)
T 1gp6_A 342 LFGKEQE 348 (356)
T ss_dssp HHHHHHH
T ss_pred HHhccCc
Confidence 9887743
No 4
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=5.3e-72 Score=518.66 Aligned_cols=283 Identities=27% Similarity=0.439 Sum_probs=246.8
Q ss_pred CcccEEeCCC---cchHHHHHHHHHHhhhcCEEEEEccCCCHHHHHHHHHHHHHHhCCCHHHHhhhccCCCCCcccccCc
Q 019965 15 TVLHCIDLSS---PDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNEKHRGYTPLHD 91 (333)
Q Consensus 15 ~~iPvIDl~~---~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~GY~~~~~ 91 (333)
.+||||||+. ..+.+++++|.+||++||||||+|||||.++++++++.+++||+||.|+|+++... .+||.+.+.
T Consensus 2 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~--~~Gy~~~~~ 79 (319)
T 1w9y_A 2 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA--SKALEGVQA 79 (319)
T ss_dssp CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHTTCCC
T ss_pred CCCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC--CCCCCcccc
Confidence 4699999973 35788999999999999999999999999999999999999999999999997643 348887654
Q ss_pred ccccCCCCCCCCceEEEEecccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Q 019965 92 ELLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALALDLNAD 171 (333)
Q Consensus 92 e~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~ 171 (333)
+. +..||+|.|+++.. |. ..+|.||+. +|+||+.+++|+++|.+++.+|+++|+++||++++
T Consensus 80 e~------~~~d~ke~~~~~~~-p~---------~~~~~wP~~--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~ 141 (319)
T 1w9y_A 80 EV------TDMDWESTFFLKHL-PI---------SNISEVPDL--DEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKG 141 (319)
T ss_dssp CG------GGCCCCEEEEEEEE-SC---------CGGGGCTTC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTT
T ss_pred cC------CCCChhhheeeecC-Cc---------ccccccccc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 42 35689999999743 21 236889986 69999999999999999999999999999999999
Q ss_pred ccCCccccC---ccceeeeeeecCCCCCCCCCCcceeeecccCCceEEEeeC-CCCceeEEeCCCCCCCCeEEecCCCCe
Q 019965 172 FFDKPEILG---EPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATD-EVLGLQICKDKDAKPQIWEYVPPLKGA 247 (333)
Q Consensus 172 ~~~~~~~~~---~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~~~lTlL~~d-~~~GLqV~~~~~~~~g~W~~v~~~~~~ 247 (333)
+|. +.+. .+.+.||++|||||+. ++..+|+++|||+|+||||+|| .++||||+.. |+|++|+|.||+
T Consensus 142 ~f~--~~~~~~~~~~~~lrl~~YPp~~~--~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~-----g~Wi~V~p~pga 212 (319)
T 1w9y_A 142 YLK--NAFYGSKGPNFGTKVSNYPPCPK--PDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKD-----GQWIDVPPMRHS 212 (319)
T ss_dssp HHH--HHHHTTTCCEEEEEEEECCCCSC--GGGGSSCCCBCCSSSEEEEEESSSCCCEEEEET-----TEEEECCCCTTC
T ss_pred HHH--HHhcCcCCccceeEEEecCCCcc--cccccccccccCCCceEEEEecCCCCeeeEeeC-----CeEEEcccCCCc
Confidence 998 6655 3668999999999886 4567899999999999999995 7999999754 569999999999
Q ss_pred EEEEcchhhHHhhCCccccccceecC-CCCCceeeEEeecCCCCceeecCCCccCCC---CCCCCCCcCHHHHHHHHHHh
Q 019965 248 FIVNLGDMLERWSNCVFKSTLHRVLG-NGRERYSIAYFVEPSHDCVVECLPTCKSEK---NPPKFPPVKYGSYLSQRYKD 323 (333)
Q Consensus 248 ~iVniGd~l~~~TnG~~ks~~HRV~~-~~~~R~S~~~F~~p~~~~~i~p~~~~~~~~---~~~~~~~~~~~e~~~~~~~~ 323 (333)
+||||||+||+||||+|||++|||+. ++.+|||++||++|+.|++|.|++++++++ +|++|+++|++||+..++++
T Consensus 213 lvVNiGD~l~~~SnG~~kS~~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~ 292 (319)
T 1w9y_A 213 IVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGL 292 (319)
T ss_dssp EEEEECHHHHHHTTTSSCCCCEEECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTT
T ss_pred EEEEhHHHHHHHhCCeeecccceecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhh
Confidence 99999999999999999999999997 577999999999999999999999999887 59999999999999998876
Q ss_pred hhc
Q 019965 324 THA 326 (333)
Q Consensus 324 ~~~ 326 (333)
.+.
T Consensus 293 ~~~ 295 (319)
T 1w9y_A 293 KFQ 295 (319)
T ss_dssp TCS
T ss_pred hcC
Confidence 653
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=1.4e-70 Score=507.97 Aligned_cols=280 Identities=19% Similarity=0.281 Sum_probs=234.4
Q ss_pred CCcccEEeCCC---cchHHHHHHHHHHhhhcCEEEEEccCCCHHHHHHHHHHHHHHhCCC-HHHHhhhccC--CCCCccc
Q 019965 14 HTVLHCIDLSS---PDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLP-LNEKIKVLRN--EKHRGYT 87 (333)
Q Consensus 14 ~~~iPvIDl~~---~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp-~e~K~~~~~~--~~~~GY~ 87 (333)
..+||||||+. .+. .++|.+||++||||||+|||||.++++++++++++||+|| .|+|+++... ..++||.
T Consensus 2 ~~~iPvIDls~l~~~~~---~~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~ 78 (311)
T 1dcs_A 2 DTTVPTFSLAELQQGLH---QDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFT 78 (311)
T ss_dssp CCCCCEEEHHHHHTTCS---HHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEE
T ss_pred CCCCcEEEchhhcCCCH---HHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCcee
Confidence 35799999962 222 2389999999999999999999999999999999999999 9999999875 4679999
Q ss_pred ccCcccc----cCCCCCCCCceEEEEecccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 019965 88 PLHDELL----DPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIA 163 (333)
Q Consensus 88 ~~~~e~~----~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~l~ 163 (333)
+.+.|.+ ... +..|++|.|+++.. +|.|| +|+|++.+++|+++|.+++.+|+++|+
T Consensus 79 ~~~~e~~~~~~~~~--~~~d~~E~~~~~~~--------------~n~wP----~~~fr~~~~~y~~~~~~l~~~ll~~la 138 (311)
T 1dcs_A 79 GLESESTAQITNTG--SYSDYSMCYSMGTA--------------DNLFP----SGDFERIWTQYFDRQYTASRAVAREVL 138 (311)
T ss_dssp EC-------------------CEEEEECSS--------------SCCCS----CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eccccccccccCCC--CCCCcceeeeccCC--------------CCCCC----ChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9887755 222 46799999999732 57899 489999999999999999999999999
Q ss_pred HhcCC----CccccCCccccCccceeeeeeecCCCCCCCCCC--cceeeecccCCceEEEeeC-CCCc---eeEEeCCCC
Q 019965 164 LALDL----NADFFDKPEILGEPIATLRLLHYEGQTSDPSKG--IYGAGAHSDFGLITLLATD-EVLG---LQICKDKDA 233 (333)
Q Consensus 164 ~~Lgl----~~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~--~~~~~~HtD~~~lTlL~~d-~~~G---LqV~~~~~~ 233 (333)
++||+ ++++|. +. .+.||++|||||+.....+ .+|+++|||+|+||||+|| .++| |||++ +
T Consensus 139 ~~Lgl~~~~~~~~f~--~~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~-~-- 209 (311)
T 1dcs_A 139 RATGTEPDGGVEAFL--DC----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEV-G-- 209 (311)
T ss_dssp HHTTCCCTTCHHHHH--SC----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEE-T--
T ss_pred HHcCCCCcCcHhHHh--hc----chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEe-C--
Confidence 99999 778887 44 7889999999997642223 7899999999999999999 8999 99999 3
Q ss_pred CCCCeEEecCCCCeEEEEcchhhHHhhCCccccccceecC-C-----CCCceeeEEeecCCCCceeecCCCccCCCCCCC
Q 019965 234 KPQIWEYVPPLKGAFIVNLGDMLERWSNCVFKSTLHRVLG-N-----GRERYSIAYFVEPSHDCVVECLPTCKSEKNPPK 307 (333)
Q Consensus 234 ~~g~W~~v~~~~~~~iVniGd~l~~~TnG~~ks~~HRV~~-~-----~~~R~S~~~F~~p~~~~~i~p~~~~~~~~~~~~ 307 (333)
|+|++|+|.||++||||||+||+||||+|||++|||+. + +.+|||++||++|+.|++|. +++++++++|++
T Consensus 210 --g~W~~V~p~pg~lvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~ 286 (311)
T 1dcs_A 210 --GAFTDLPYRPDAVLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVS 286 (311)
T ss_dssp --TEEEECCCCTTCEEEEECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCC
T ss_pred --CEEEeCcCCCCeEEEEHHHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccc
Confidence 57999999999999999999999999999999999997 4 56899999999999999999 999998889999
Q ss_pred C--CCcCHHHHHHHHHHhhhccc
Q 019965 308 F--PPVKYGSYLSQRYKDTHADL 328 (333)
Q Consensus 308 ~--~~~~~~e~~~~~~~~~~~~~ 328 (333)
| +++|++||+..++++.|.+.
T Consensus 287 y~~~~~t~~ey~~~~~~~~~~~~ 309 (311)
T 1dcs_A 287 LDGETATFQDWIGGNYVNIRRTS 309 (311)
T ss_dssp CCSSEEEHHHHHCSSCCCEECCC
T ss_pred cCCCCccHHHHHHHHHHHHhccc
Confidence 9 99999999999988877654
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=7.9e-67 Score=475.84 Aligned_cols=265 Identities=30% Similarity=0.426 Sum_probs=223.0
Q ss_pred CcccEEeCCCcchHHHHHHHHHHhhhcCEEEEEccCCCHHHHHHHHHHHHHHhCCCHHHHhhhccC-CCCCcccccC-cc
Q 019965 15 TVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRN-EKHRGYTPLH-DE 92 (333)
Q Consensus 15 ~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~GY~~~~-~e 92 (333)
++||||||+..+ .+++|.+||++||||||+|||||.++++++++.+++||++ |+|+++... ..++||.+.+ .|
T Consensus 2 ~~IPvIDls~~~---~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~~~~GY~~~~~~e 76 (280)
T 3on7_A 2 MKLETIDYRAAD---SAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRETHDGFFPASISE 76 (280)
T ss_dssp --CCEEETTSTT---HHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTTTCCEEECCC---
T ss_pred CCCCEEECCChh---HHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCCCCCccccCcccc
Confidence 579999998543 6789999999999999999999999999999999999998 899998755 5689999876 55
Q ss_pred cccCCCCCCCCceEEEEecccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc--
Q 019965 93 LLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALALDLNA-- 170 (333)
Q Consensus 93 ~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~-- 170 (333)
..... ...|++|.|.+. .||.. +++||+.+++|+++|.+++.+||++|+++||++.
T Consensus 77 ~~~~~--~~~D~kE~~~~~------------------p~~~~--p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~ 134 (280)
T 3on7_A 77 TAKGH--TVKDIKEYYHVY------------------PWGRI--PDSLRANILAYYEKANTLASELLEWIETYSPDEIKA 134 (280)
T ss_dssp -------CCCCSCEEEEEC------------------TTSCC--CGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHT
T ss_pred ccCCC--CcccHHHHHhcC------------------CCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchh
Confidence 44322 357999999874 16654 5899999999999999999999999999999863
Q ss_pred cccCCc-cccCcc-ceeeeeeecCCCCCCCCCCcceeeecccCCceEEEeeCCCCceeEEeCCCCCCCCeEEecCCCCeE
Q 019965 171 DFFDKP-EILGEP-IATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYVPPLKGAF 248 (333)
Q Consensus 171 ~~~~~~-~~~~~~-~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~~~lTlL~~d~~~GLqV~~~~~~~~g~W~~v~~~~~~~ 248 (333)
+++... +.+.++ .+.||++|||||+.......+|+++|||+|+||||+||+++||||++++ |+|++|+|.||++
T Consensus 135 ~~~~~~~~~~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~----g~W~~V~p~pg~~ 210 (280)
T 3on7_A 135 KFSIPLPEMIANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKD----GSWLDVPSDFGNI 210 (280)
T ss_dssp TCSSCHHHHHTTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTT----SCEEECCCCTTCE
T ss_pred hhhHHHHHHhcCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCC----CCEEECcCCCCEE
Confidence 332200 334444 4899999999998654446899999999999999999999999999876 6799999999999
Q ss_pred EEEcchhhHHhhCCccccccceecCC-----CCCceeeEEeecCCCCceeecCCCccCCCCCCCCCCcCHHHHHHHHHHh
Q 019965 249 IVNLGDMLERWSNCVFKSTLHRVLGN-----GRERYSIAYFVEPSHDCVVECLPTCKSEKNPPKFPPVKYGSYLSQRYKD 323 (333)
Q Consensus 249 iVniGd~l~~~TnG~~ks~~HRV~~~-----~~~R~S~~~F~~p~~~~~i~p~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 323 (333)
||||||+||+||||+|||++|||+++ ..+|||++||++|+.|++|.| ++|++||+.+|+++
T Consensus 211 vVNiGD~l~~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p--------------~ita~~~l~~rl~~ 276 (280)
T 3on7_A 211 IINIGDMLQEASDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE--------------RYTADSYLMERLRE 276 (280)
T ss_dssp EEEECHHHHHHTTTSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS--------------SCBHHHHHHHHHHH
T ss_pred EEEcChHHHHHhCCcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC--------------CccHHHHHHHHHHH
Confidence 99999999999999999999999974 458999999999999999974 59999999999986
Q ss_pred h
Q 019965 324 T 324 (333)
Q Consensus 324 ~ 324 (333)
.
T Consensus 277 ~ 277 (280)
T 3on7_A 277 L 277 (280)
T ss_dssp T
T ss_pred h
Confidence 5
No 7
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=95.77 E-value=0.86 Score=39.63 Aligned_cols=82 Identities=18% Similarity=0.143 Sum_probs=56.5
Q ss_pred eeeeecCCCCCCCCCCcceeeecccCC-----ceEEEee--CC------CCceeEEeCCCCCCCCeEEecCCCCeEEEEc
Q 019965 186 LRLLHYEGQTSDPSKGIYGAGAHSDFG-----LITLLAT--DE------VLGLQICKDKDAKPQIWEYVPPLKGAFIVNL 252 (333)
Q Consensus 186 lr~~~Yp~~~~~~~~~~~~~~~HtD~~-----~lTlL~~--d~------~~GLqV~~~~~~~~g~W~~v~~~~~~~iVni 252 (333)
+.+.+|++. .-...+|.|.. .+|+++. +. -|.|.++...+ .....|.|..|.+|+.-
T Consensus 119 ~~~~~Y~~~-------G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~---~~~~~v~P~~grlv~F~ 188 (247)
T 2hbt_A 119 AMVACYPGN-------GTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGK---AQFADIEPKFDRLLFFW 188 (247)
T ss_dssp EEEEEECSS-------SCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTC---SSCEEECCBTTEEEEEE
T ss_pred EEEEEecCC-------CCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCC---CceEEEEcCCCEEEEEe
Confidence 667888751 12357788873 6788874 21 23467776652 35789999999999987
Q ss_pred chhhHHhhCCccccccceecCCCCCceeeEEeecC
Q 019965 253 GDMLERWSNCVFKSTLHRVLGNGRERYSIAYFVEP 287 (333)
Q Consensus 253 Gd~l~~~TnG~~ks~~HRV~~~~~~R~S~~~F~~p 287 (333)
.+. -.+|.|......|+||+..++-
T Consensus 189 s~~----------~~~H~V~p~~~~R~sit~W~~~ 213 (247)
T 2hbt_A 189 SDR----------RNPHEVQPAYATRYAITVWYFD 213 (247)
T ss_dssp CST----------TCCEEECCBSSCEEEEEEEEEE
T ss_pred cCC----------CceeeeccCCCEEEEEEEEEcC
Confidence 531 1589998766799999876653
No 8
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=94.02 E-value=0.13 Score=44.84 Aligned_cols=77 Identities=18% Similarity=0.168 Sum_probs=51.7
Q ss_pred eeeeeecCCCCCCCCCCcceeeecccCC-----------ceEEEee--C--C-C-CceeEEeCCCCCCCCeEEecCCCCe
Q 019965 185 TLRLLHYEGQTSDPSKGIYGAGAHSDFG-----------LITLLAT--D--E-V-LGLQICKDKDAKPQIWEYVPPLKGA 247 (333)
Q Consensus 185 ~lr~~~Yp~~~~~~~~~~~~~~~HtD~~-----------~lTlL~~--d--~-~-~GLqV~~~~~~~~g~W~~v~~~~~~ 247 (333)
.+++++|.+- --..+|.|.. .+|+++. + . . |.|.+....+ =..|+|..|.
T Consensus 100 ~~~~~rY~~G--------~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~-----~~~V~P~~G~ 166 (243)
T 3dkq_A 100 PPLFNRYQGG--------ETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYG-----QQSIKLSAGS 166 (243)
T ss_dssp EEEEEEECTT--------CEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTE-----EEEECCCTTC
T ss_pred cceEEEECCC--------CeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCC-----cEEEecCCCE
Confidence 3788999752 2246777753 4666653 3 1 2 3465655432 4679999999
Q ss_pred EEEEcchhhHHhhCCccccccceecC-CCCCceeeEEeec
Q 019965 248 FIVNLGDMLERWSNCVFKSTLHRVLG-NGRERYSIAYFVE 286 (333)
Q Consensus 248 ~iVniGd~l~~~TnG~~ks~~HRV~~-~~~~R~S~~~F~~ 286 (333)
+|+.-. .++|+|.. ....|++++.+++
T Consensus 167 ~v~F~s------------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 167 LVLYPS------------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp EEEEET------------TSEEEECCEEEECEEEEEEEEE
T ss_pred EEEECC------------CCeEcCccccccCEEEEEEehh
Confidence 998743 36899986 4568999998875
No 9
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=93.29 E-value=1.8 Score=36.74 Aligned_cols=73 Identities=16% Similarity=0.156 Sum_probs=47.0
Q ss_pred eeecccC-CceEEEee----CCCCceeEEeCCC------------C--CCCCeEEecCCCCeEEEEcchhhHHhhCCccc
Q 019965 205 AGAHSDF-GLITLLAT----DEVLGLQICKDKD------------A--KPQIWEYVPPLKGAFIVNLGDMLERWSNCVFK 265 (333)
Q Consensus 205 ~~~HtD~-~~lTlL~~----d~~~GLqV~~~~~------------~--~~g~W~~v~~~~~~~iVniGd~l~~~TnG~~k 265 (333)
...|.+. +.|+.++- ++.+.|.+.++.. . ....+..|.|.+|.+||.-+.
T Consensus 116 ~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFpS~----------- 184 (216)
T 2rg4_A 116 HGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWESW----------- 184 (216)
T ss_dssp EEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEETT-----------
T ss_pred ccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEECCC-----------
Confidence 3566665 35554441 2334577766421 0 013577899999999998764
Q ss_pred cccceecC--CCCCceeeEEeecCCC
Q 019965 266 STLHRVLG--NGRERYSIAYFVEPSH 289 (333)
Q Consensus 266 s~~HRV~~--~~~~R~S~~~F~~p~~ 289 (333)
-.|+|.. ...+|+||+|-+.+..
T Consensus 185 -l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 185 -LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp -SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred -CEEeccCCCCCCCEEEEEEEeecCC
Confidence 2699986 4569999999887765
No 10
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=90.18 E-value=1.8 Score=36.36 Aligned_cols=84 Identities=10% Similarity=0.081 Sum_probs=53.3
Q ss_pred eeeeecCCCCCCCCCCcceeeecccCC--------ceEEEeeCCCCceeEEeCCCC-----CCCCeEEecCCCCeEEEEc
Q 019965 186 LRLLHYEGQTSDPSKGIYGAGAHSDFG--------LITLLATDEVLGLQICKDKDA-----KPQIWEYVPPLKGAFIVNL 252 (333)
Q Consensus 186 lr~~~Yp~~~~~~~~~~~~~~~HtD~~--------~lTlL~~d~~~GLqV~~~~~~-----~~g~W~~v~~~~~~~iVni 252 (333)
.-+|+|.+- .-++++|.|-. +.+|-+.. ..=+.+...... ..+..+.+...+|+++|+-
T Consensus 102 ~LvN~Y~~G-------~d~i~~H~D~~~~~~~~~~IasvSLG~-~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~ 173 (204)
T 3s57_A 102 VLINRYKDG-------SDHICEHRDDERELAPGSPIASVSFGA-SRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMN 173 (204)
T ss_dssp EEEEEESST-------TCCEEEECCCCTTBCTTCCEEEEEEES-CEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEE
T ss_pred eEEEEECCC-------CCcccceecChhhccCCCcEEEEECCC-ceEEEEEEcCCCccccccCCceEEEECCCCCEEEEC
Confidence 458999862 23689999972 22332321 122444433210 0134788999999999999
Q ss_pred chhhHHhhCCccccccceecC---CCCCceeeEEee
Q 019965 253 GDMLERWSNCVFKSTLHRVLG---NGRERYSIAYFV 285 (333)
Q Consensus 253 Gd~l~~~TnG~~ks~~HRV~~---~~~~R~S~~~F~ 285 (333)
|++=..|. |.|-. ....|+|+.|-.
T Consensus 174 g~~q~~w~--------H~Ip~~~~~~~~RislTFR~ 201 (204)
T 3s57_A 174 HPTNTHWY--------HSLPVRKKVLAPRVNLTFRK 201 (204)
T ss_dssp TTHHHHEE--------EEECCCTTCCSCEEEEEEEC
T ss_pred chhhheeE--------eeccccCCCCCCEEEEEeee
Confidence 99877774 77764 246899999853
No 11
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=90.14 E-value=2.1 Score=36.89 Aligned_cols=86 Identities=17% Similarity=0.181 Sum_probs=54.5
Q ss_pred eeeeecCCCCCCCCCCcceeeecccCC--------ceEEEeeCCCCceeEEeCCCC------CCCCeEEecCCCCeEEEE
Q 019965 186 LRLLHYEGQTSDPSKGIYGAGAHSDFG--------LITLLATDEVLGLQICKDKDA------KPQIWEYVPPLKGAFIVN 251 (333)
Q Consensus 186 lr~~~Yp~~~~~~~~~~~~~~~HtD~~--------~lTlL~~d~~~GLqV~~~~~~------~~g~W~~v~~~~~~~iVn 251 (333)
.-+|+|++- +-++++|.|-. +.||-+-. ..=+.+...... .....+.+...+|+++|+
T Consensus 128 ~LvN~Y~~G-------~d~i~~H~D~~~~~~~~~~IaslSLG~-~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM 199 (238)
T 2iuw_A 128 LLCNLYRNE-------KDSVDWHSDDEPSLGRCPIIASLSFGA-TRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIM 199 (238)
T ss_dssp EEEEEECST-------TCCEEEECCCCGGGCSSCCEEEEEEES-CEEEEEEECCC--------CCCEEEEEECTTCEEEE
T ss_pred EEEEEECCC-------CCceeCCcCChhhcCCCCcEEEEECCC-CEEEEEeccCCccccCcccCCceEEEEcCCCCEEEE
Confidence 568999752 33689999952 33333321 112333333210 003589999999999999
Q ss_pred cchhhHHhhCCccccccceecC---CCCCceeeEEeecC
Q 019965 252 LGDMLERWSNCVFKSTLHRVLG---NGRERYSIAYFVEP 287 (333)
Q Consensus 252 iGd~l~~~TnG~~ks~~HRV~~---~~~~R~S~~~F~~p 287 (333)
-|++=..|. |.|.. ....|+|+.|-...
T Consensus 200 ~G~~r~~w~--------H~I~~~~~~~~~RIsLTfR~v~ 230 (238)
T 2iuw_A 200 EGATQADWQ--------HRVPKEYHSREPRVNLTFRTVY 230 (238)
T ss_dssp EETHHHHEE--------EEECCCSSCCCCEEEEEEECCC
T ss_pred ChhhhCccE--------ecCCCcCCCCCCEEEEEeeecc
Confidence 999877775 66653 36799999997643
No 12
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=87.87 E-value=3.6 Score=34.89 Aligned_cols=103 Identities=22% Similarity=0.193 Sum_probs=61.3
Q ss_pred HHHHHHHHhcCCCccccCCccccCccceeeeeeecCCCCCCCCCCcceeeecccCC-----------ceEEEee--C-CC
Q 019965 157 VVARIIALALDLNADFFDKPEILGEPIATLRLLHYEGQTSDPSKGIYGAGAHSDFG-----------LITLLAT--D-EV 222 (333)
Q Consensus 157 ~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~~-----------~lTlL~~--d-~~ 222 (333)
.|.+-|+..+|++.+..+ .+++++|.+... ..+|.|.. .+|+++. | ..
T Consensus 94 ~i~~Ri~~~~gl~~~~~E----------~lqv~~Y~~G~~--------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~ 155 (216)
T 3itq_A 94 KIEKRISSIMNVPASHGE----------GLHILNYEVDQQ--------YKAHYDYFAEHSRSAANNRISTLVMYLNDVEE 155 (216)
T ss_dssp HHHHHHHHHHTSCGGGBC----------CCEEEEECBTCC--------EEEECSSCCTTSGGGGGCEEEEEEEECSCCSE
T ss_pred HHHHHHHHhcCceecccc----------ceeEEEeCCCCc--------cccccCCCcCCCcccCCceEEEEEEecccCCc
Confidence 344444445677643222 277888875321 46777763 3777764 2 23
Q ss_pred CceeEEeCCCCCCCCeEEecCCCCeEEEEcchhhHHhhCCc-cccccceecC-CCCCceeeEEeecC
Q 019965 223 LGLQICKDKDAKPQIWEYVPPLKGAFIVNLGDMLERWSNCV-FKSTLHRVLG-NGRERYSIAYFVEP 287 (333)
Q Consensus 223 ~GLqV~~~~~~~~g~W~~v~~~~~~~iVniGd~l~~~TnG~-~ks~~HRV~~-~~~~R~S~~~F~~p 287 (333)
||=-+.... =+.|.|..|.+|+.-.- ..+|. -..++|+|.. ....|+++..+++-
T Consensus 156 GGeT~Fp~~------~~~V~P~~G~al~f~~~----~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~~ 212 (216)
T 3itq_A 156 GGETFFPKL------NLSVHPRKGMAVYFEYF----YQDQSLNELTLHGGAPVTKGEKWIATQWVRR 212 (216)
T ss_dssp ECCEEETTT------TEEECCCTTCEEEEECC----CSSHHHHHTTCEEECCEEESCEEEEEEEEES
T ss_pred CceeEecCC------CCEEecCCCeEEEEecc----CCCCCCCCccccccceeccccEEEEEeeEec
Confidence 443344433 37899999998886541 11232 2457999985 44579998877653
No 13
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=86.77 E-value=7.9 Score=32.62 Aligned_cols=80 Identities=15% Similarity=0.107 Sum_probs=50.3
Q ss_pred eeeeecCCCCCCCCCCcceeeecccC-----C--ceEEEeeCCCCceeEEeCCCCCCCCeEEecCCCCeEEEEcchhhHH
Q 019965 186 LRLLHYEGQTSDPSKGIYGAGAHSDF-----G--LITLLATDEVLGLQICKDKDAKPQIWEYVPPLKGAFIVNLGDMLER 258 (333)
Q Consensus 186 lr~~~Yp~~~~~~~~~~~~~~~HtD~-----~--~lTlL~~d~~~GLqV~~~~~~~~g~W~~v~~~~~~~iVniGd~l~~ 258 (333)
.-+|+|.+ +. ++++|.|. + ++||-+-. ..=+.+..... .+....+...+|+++|.-|+.- .
T Consensus 107 ~LvN~Y~~-------G~-~i~~H~D~~e~~~~~pI~svSLG~-~~~f~f~~~~~--~~~~~~i~L~~GsllvM~G~~r-~ 174 (211)
T 3i3q_A 107 CLINRYAP-------GA-KLSLHQDKDEPDLRAPIVSVSLGL-PAIFQFGGLKR--NDPLKRLLLEHGDVVVWGGESR-L 174 (211)
T ss_dssp EEEEEECT-------TC-CEEEECCCCCSCTTSCEEEEEEES-CEEEEECCSST--TSCCEEEEECTTCEEEECGGGT-T
T ss_pred EEEEEEcC-------CC-CcccccCCCccccCCCEEEEECCC-CeEEEEecccC--CCceEEEECCCCCEEEECchHH-c
Confidence 56889975 33 78999993 1 23333321 12234443211 2458999999999999998762 2
Q ss_pred hhCCccccccceecC-C-------CCCceeeEEee
Q 019965 259 WSNCVFKSTLHRVLG-N-------GRERYSIAYFV 285 (333)
Q Consensus 259 ~TnG~~ks~~HRV~~-~-------~~~R~S~~~F~ 285 (333)
| .|.|.. . +..|+|+.|-.
T Consensus 175 ~--------~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 175 F--------YHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp C--------CEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred e--------EeccCcccCCcCCCCCCCEEEEEeee
Confidence 3 488864 1 23699999864
No 14
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=84.38 E-value=4.4 Score=34.27 Aligned_cols=47 Identities=15% Similarity=0.155 Sum_probs=32.9
Q ss_pred eEEecCCCCeEEEEcchhhHHhhCCcc-ccccceecC-CCCCceeeEEeecCC
Q 019965 238 WEYVPPLKGAFIVNLGDMLERWSNCVF-KSTLHRVLG-NGRERYSIAYFVEPS 288 (333)
Q Consensus 238 W~~v~~~~~~~iVniGd~l~~~TnG~~-ks~~HRV~~-~~~~R~S~~~F~~p~ 288 (333)
-+.|.|..|.+|+.-- ...+|.. ..++|+|.. ....||++..+++-.
T Consensus 170 ~~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~ 218 (224)
T 2jig_A 170 GLAVKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHVA 218 (224)
T ss_dssp SEEECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEESS
T ss_pred ceEEecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEcC
Confidence 3789999999888753 1223432 578999985 445899988887643
No 15
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=77.26 E-value=8.1 Score=35.21 Aligned_cols=103 Identities=17% Similarity=0.217 Sum_probs=63.1
Q ss_pred eeeeeecCCCCCCCCCCcceeeecccCC------ceEEEeeCCCCceeEEeCCCCCCCCeEEecCCCCeEEEEcchhhHH
Q 019965 185 TLRLLHYEGQTSDPSKGIYGAGAHSDFG------LITLLATDEVLGLQICKDKDAKPQIWEYVPPLKGAFIVNLGDMLER 258 (333)
Q Consensus 185 ~lr~~~Yp~~~~~~~~~~~~~~~HtD~~------~lTlL~~d~~~GLqV~~~~~~~~g~W~~v~~~~~~~iVniGd~l~~ 258 (333)
..-+|.|.+ +. ++++|.|.. ++||=+-. ..=+.+..++ +.++.+...+|+++|+-|+.=..
T Consensus 199 ~~lvN~Y~~-------G~-~I~~H~D~~~~~~~~I~slSLG~-~~~f~f~~~~----~~~~~l~L~~gsLlvM~G~~r~~ 265 (345)
T 3tht_A 199 QMTINQYEP-------GQ-GIPAHIDTHSAFEDEIVSLSLGS-EIVMDFKHPD----GIAVPVMLPRRSLLVMTGESRYL 265 (345)
T ss_dssp EEEEEEECT-------TC-CEEEECCCTTTBCSCEEEEEESS-CEEEEEECTT----SCEEEEEECTTEEEEECTHHHHT
T ss_pred EEEEEEecC-------CC-CEeeccCCchhcCCeEEEEECCC-ceeEEEccCC----CceEEEEcCCCcEEEEChHHhhc
Confidence 356889975 22 789999984 33333321 1224444443 56999999999999999999888
Q ss_pred hhCCccccccceec-------------------CCCCCceeeEEeecCCCCceeecCCCccC
Q 019965 259 WSNCVFKSTLHRVL-------------------GNGRERYSIAYFVEPSHDCVVECLPTCKS 301 (333)
Q Consensus 259 ~TnG~~ks~~HRV~-------------------~~~~~R~S~~~F~~p~~~~~i~p~~~~~~ 301 (333)
|.-|.-+-...-+- .+...|+|+.|-.-+...+.- ..+.+++
T Consensus 266 w~H~I~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~~c~C-~~~~~cd 326 (345)
T 3tht_A 266 WTHGITCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQTPCNC-SYPLVCD 326 (345)
T ss_dssp SEEEECCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSSCCCC-SCTTTCT
T ss_pred eEccCCcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCCCcCC-CCCCccc
Confidence 86554332221110 123469999999877654322 2444443
No 16
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=64.95 E-value=3.6 Score=34.63 Aligned_cols=36 Identities=19% Similarity=0.227 Sum_probs=30.9
Q ss_pred cccEEeCCCcchHHHHHHHHHHhhhcCEEEEEccCC
Q 019965 16 VLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGI 51 (333)
Q Consensus 16 ~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 51 (333)
.||++++......++++.+.+++.+.-.+.|.|||+
T Consensus 125 ~v~~~~y~~~g~~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPGSPELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCTTCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 799999965556678899999999988999999996
No 17
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=59.59 E-value=5.2 Score=33.70 Aligned_cols=36 Identities=11% Similarity=0.150 Sum_probs=30.7
Q ss_pred cccEEeCCCcchHHHHHHHHHHhhhcCEEEEEccCC
Q 019965 16 VLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGI 51 (333)
Q Consensus 16 ~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 51 (333)
.||++++......++++.+.+++.+.-.+.|.|||+
T Consensus 122 ~ip~~~y~~~g~~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATFGTRELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCTTCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 699999965555678899999999888999999996
No 18
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=59.35 E-value=5.8 Score=33.05 Aligned_cols=36 Identities=8% Similarity=0.082 Sum_probs=30.7
Q ss_pred cccEE-eCCCcchHHHHHHHHHHhhhcCEEEEEccCC
Q 019965 16 VLHCI-DLSSPDIHQSVSLLKQACLDCGFFYVINHGI 51 (333)
Q Consensus 16 ~iPvI-Dl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 51 (333)
.||++ ++......++++.+.+++.+.-.+.|.|||+
T Consensus 117 ~ip~~~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 153 (200)
T 2fk5_A 117 EVPVLAPKTVSATEEAALSVAEALREHRACLLRGHGA 153 (200)
T ss_dssp CEEEECCSCCSSSHHHHHHHHHHHHHCSEEEETTTEE
T ss_pred CceEecCCCCCCcHHHHHHHHHHhCcCCEEEECCCCc
Confidence 79999 7865556678899999999989999999995
No 19
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=58.38 E-value=6.3 Score=33.72 Aligned_cols=37 Identities=8% Similarity=0.041 Sum_probs=31.4
Q ss_pred CcccEEeCCCcchHHHHHHHHHHhhhcCEEEEEccCC
Q 019965 15 TVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGI 51 (333)
Q Consensus 15 ~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 51 (333)
..||++++......++++.+.+++++.-.+.|.|||+
T Consensus 160 ~~v~~~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 160 QGISVVEFEKPGSVELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp SCCEEECCCSTTCHHHHHHHHHHTSSCSEEEETTSCE
T ss_pred CCceEecCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 3699999965556678899999999999999999996
No 20
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=53.44 E-value=22 Score=32.08 Aligned_cols=44 Identities=14% Similarity=0.098 Sum_probs=35.9
Q ss_pred cchHHHHHHHHHHhhhcCEEEEEccCCC----HHHHHHHHHHHHHHhC
Q 019965 25 PDIHQSVSLLKQACLDCGFFYVINHGIS----QEFMDEVFTQSKRFFN 68 (333)
Q Consensus 25 ~~~~~~~~~l~~A~~~~Gff~l~nhgi~----~~~~~~~~~~~~~fF~ 68 (333)
...+++.+++.+.++.-||..=.+|||+ .+-+.++.+++++|++
T Consensus 301 g~~e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 301 GPVDKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 4456777888888888888777789875 5889999999999985
No 21
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=52.86 E-value=7.2 Score=34.20 Aligned_cols=36 Identities=11% Similarity=0.038 Sum_probs=31.2
Q ss_pred cccEEeCCCcchHHHHHHHHHHhhhcCEEEEEccCC
Q 019965 16 VLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGI 51 (333)
Q Consensus 16 ~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 51 (333)
.||++++......++++.+.+++++.-.+.|.|||+
T Consensus 179 ~v~v~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMVPGTDAIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCCSSSHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred ceeEecCCCCCCHHHHHHHHHHHccCCEEEEcCCCc
Confidence 699999865555678999999999999999999996
No 22
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=52.07 E-value=7.7 Score=32.36 Aligned_cols=36 Identities=11% Similarity=0.100 Sum_probs=29.6
Q ss_pred CcccEEeCCCcchHHHHHHHHHHhhhcC---EEEEEccCC
Q 019965 15 TVLHCIDLSSPDIHQSVSLLKQACLDCG---FFYVINHGI 51 (333)
Q Consensus 15 ~~iPvIDl~~~~~~~~~~~l~~A~~~~G---ff~l~nhgi 51 (333)
..||++++. ....++++.+.+++.+.+ .+.|.|||+
T Consensus 138 ~~vp~~~~~-~g~~~La~~i~~~l~~~~~~~avll~nHG~ 176 (208)
T 2irp_A 138 IKIPIFPNE-QNIPLLAKEVENYFKTSEDKYGFLIRGHGL 176 (208)
T ss_dssp CEEEEECCC-SCHHHHHHHHHHHHHHCSCCSCEEETTTEE
T ss_pred cceeeecCC-CCHHHHHHHHHHHHhcCCCceEEEEcCCCC
Confidence 479999985 456678899999998875 788999996
No 23
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=47.47 E-value=22 Score=30.91 Aligned_cols=51 Identities=18% Similarity=0.218 Sum_probs=36.7
Q ss_pred CCcccEEeCCCcchHHHHHHHHHHhhhcCEEEEEccCCCHHHHHHHHHHHHHHh
Q 019965 14 HTVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFF 67 (333)
Q Consensus 14 ~~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF 67 (333)
-++|+-||++..-..+..++|.+++.++|++.+.+..++.+.. .+.++.|-
T Consensus 15 Gaei~gvdl~~~l~~~~~~~l~~~l~~~Gvv~frg~~~~~~~~---~~~~~~~G 65 (283)
T 1otj_A 15 GAQISGADLTRPLSDNQFEQLYHAVLRHQVVFLRDQAITPQQQ---RALAQRFG 65 (283)
T ss_dssp CEEEESCCSSSCCCHHHHHHHHHHHHHHSEEEECSCCCCHHHH---HHHHHTTS
T ss_pred eEEEECCCcCccCCHHHHHHHHHHHHHCCEEEECCCCCCHHHH---HHHHHHhC
Confidence 4567778886533345688999999999999999998876533 34445553
No 24
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=44.33 E-value=27 Score=30.69 Aligned_cols=51 Identities=10% Similarity=0.063 Sum_probs=36.7
Q ss_pred CcccEEeCCCcchHHHHHHHHHHhhhcCEEEEEccC-CCHHHHHHHHHHHHHHhC
Q 019965 15 TVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHG-ISQEFMDEVFTQSKRFFN 68 (333)
Q Consensus 15 ~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhg-i~~~~~~~~~~~~~~fF~ 68 (333)
++|+-||++..-..+..++|.+++.++|++.+.+.. ++. +...+.++.|-.
T Consensus 26 aei~gvdl~~~l~~~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~ 77 (301)
T 1oih_A 26 AEIRGVKLSPDLDAATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGE 77 (301)
T ss_dssp EEEESCCCCTTCCHHHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSC
T ss_pred eEEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCC
Confidence 456667886533355688999999999999999988 875 345555565544
No 25
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=40.62 E-value=16 Score=31.92 Aligned_cols=36 Identities=14% Similarity=0.027 Sum_probs=30.2
Q ss_pred cccEEeCCCcc-hHHHHHHHHHHhhhcCEEEEEccCC
Q 019965 16 VLHCIDLSSPD-IHQSVSLLKQACLDCGFFYVINHGI 51 (333)
Q Consensus 16 ~iPvIDl~~~~-~~~~~~~l~~A~~~~Gff~l~nhgi 51 (333)
.||++|+.... ..++++.|.+++.+.-.+.|.|||+
T Consensus 156 ~v~~~~y~~~~~~~el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 156 RVAYHGYEGIALDLSERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp TEEEECCCCSSCCHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred CEEEECCCCCCCCHHHHHHHHHHhCcCCEEEEcCCce
Confidence 69999986433 5678889999999999999999995
No 26
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=39.11 E-value=34 Score=19.13 Aligned_cols=19 Identities=37% Similarity=0.583 Sum_probs=16.2
Q ss_pred hHHHHHHHHHHhhhcCEEE
Q 019965 27 IHQSVSLLKQACLDCGFFY 45 (333)
Q Consensus 27 ~~~~~~~l~~A~~~~Gff~ 45 (333)
...+++.|.-.|.+-|||+
T Consensus 8 Gs~LVdaL~~vCgdRGF~~ 26 (30)
T 1m5a_B 8 GSHLVEALYLVCGERGFFY 26 (30)
T ss_dssp THHHHHHHHHHHGGGCEEE
T ss_pred HHHHHHHHHHHhccCcccc
Confidence 3567888999999999998
No 27
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=38.09 E-value=20 Score=33.06 Aligned_cols=51 Identities=16% Similarity=0.077 Sum_probs=38.0
Q ss_pred cccEEeCCC-cchHHHHHHHHHHhhhcCEEEEEccCCCHHHHHHHHHHHHHHhCC
Q 019965 16 VLHCIDLSS-PDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNL 69 (333)
Q Consensus 16 ~iPvIDl~~-~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~l 69 (333)
++|.||++. ....+...++.+|+.++|++.+.+..++.+ ...+.++.|-.+
T Consensus 122 ~~~~~~~~~~l~~d~~~~~~~~~l~~~Gvv~frg~~~~~~---~~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLRYDEHAYKWLSTLKKVGIVRLTGASDKPG---EVSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHHCHHHHHHHHHHHHHHSEEEEECCCSSTT---HHHHHHHHHSCC
T ss_pred CCCccCHHHHhcCHHHHHHHHHHHHhcCEEEEeCCCCCHH---HHHHHHHHhCCC
Confidence 789999952 123457788999999999999999988755 344556666554
No 28
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=34.21 E-value=32 Score=29.98 Aligned_cols=52 Identities=17% Similarity=0.222 Sum_probs=38.3
Q ss_pred CCcccEEeCCCcchHHHHHHHHHHhhhcCEEEEEccCCCHHHHHHHHHHHHHHhC
Q 019965 14 HTVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFN 68 (333)
Q Consensus 14 ~~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 68 (333)
-++|.=||++..-..+..++|.+|+.++|.+.+.+..++.+ +..+.++.|-.
T Consensus 13 Gaei~gvdl~~~l~~~~~~~l~~~l~~~gvv~fR~q~l~~~---~~~~fa~~fG~ 64 (277)
T 3pvj_A 13 GAQISGVDISRDISAEERDAIEQALLQHQVLFLRDQPINPE---QQARFAARFGD 64 (277)
T ss_dssp CEEEESCCTTSCCCHHHHHHHHHHHHHHSEEEESSCCCCHH---HHHHHHGGGSC
T ss_pred eEEEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhCC
Confidence 45777788865324567789999999999999999988764 33455666644
No 29
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=33.87 E-value=40 Score=29.78 Aligned_cols=53 Identities=8% Similarity=0.089 Sum_probs=39.2
Q ss_pred CCcccEEeCCCcchHHHHHHHHHHhhhcCEEEEEcc-CCCHHHHHHHHHHHHHHhCC
Q 019965 14 HTVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINH-GISQEFMDEVFTQSKRFFNL 69 (333)
Q Consensus 14 ~~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nh-gi~~~~~~~~~~~~~~fF~l 69 (333)
-++|+=||++..-..+..++|.+|+.++|.+.+.+. .++.+ +..+.++.|-.+
T Consensus 19 Gaei~gvdl~~~L~d~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG~l 72 (301)
T 3r1j_A 19 GARVDGVRLGGDLDDATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLGTP 72 (301)
T ss_dssp CEEEESCCCSTTCCHHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHSCB
T ss_pred cceEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcCCc
Confidence 356777888743345678899999999999999998 78765 445566766544
No 30
>3m4r_A Uncharacterized protein; short chain dehydrogenase, class II aldolase, adducin head D carbohydrate metabolism, structural genomics; 2.00A {Thermoplasma acidophilum}
Probab=33.31 E-value=21 Score=30.08 Aligned_cols=34 Identities=9% Similarity=0.121 Sum_probs=27.8
Q ss_pred ccEEeCCCcchHHHHHHHHHHhhhc-CEEEEEccCC
Q 019965 17 LHCIDLSSPDIHQSVSLLKQACLDC-GFFYVINHGI 51 (333)
Q Consensus 17 iPvIDl~~~~~~~~~~~l~~A~~~~-Gff~l~nhgi 51 (333)
||++++..... ++++.+.+++.+. -.+.|.|||+
T Consensus 156 v~~~~y~~~g~-ela~~i~~~l~~~~~avlL~nHG~ 190 (222)
T 3m4r_A 156 VVVLPYIPPGF-TLAKEVMNCFKKGIDGIVLRKHGL 190 (222)
T ss_dssp EEEECCCCSSH-HHHHHHHHHCCTTCSEEEETTTEE
T ss_pred ceecCCcCCcH-HHHHHHHHHHhcCCCEEEECCCCC
Confidence 89999865444 7889999999865 7788999995
No 31
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=31.20 E-value=21 Score=33.70 Aligned_cols=56 Identities=7% Similarity=0.046 Sum_probs=39.9
Q ss_pred CCCCcccEEeCCCcchHHHHHHHHHHhhhcCEEEEEccCCCHHHHHHHHHHHHHHhC
Q 019965 12 KAHTVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFN 68 (333)
Q Consensus 12 ~~~~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 68 (333)
....-||.||++.-....+..+..+.+++.|++.|.|. ||.+...+..+...+|..
T Consensus 96 ~G~~~iP~i~f~di~~~~~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 96 QGDAVWPVLSYADIKAGHVTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp TTCCSSCEEEHHHHHHTCCCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred cCCCCcceecHHHhcCCCCCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 45678999999532111123456678889999977754 788888888888888854
No 32
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.39 E-value=26 Score=23.91 Aligned_cols=38 Identities=13% Similarity=0.176 Sum_probs=33.0
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccC
Q 019965 137 LPGWRETMDRFHQEALEVAKVVARIIALALDLNADFFD 174 (333)
Q Consensus 137 ~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~ 174 (333)
+.+-+..++.||..-.+-...-+..||..+||+.+...
T Consensus 13 ~k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVr 50 (71)
T 2da7_A 13 YKDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVK 50 (71)
T ss_dssp STHHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHH
Confidence 56778999999999988888889999999999987654
No 33
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=27.01 E-value=60 Score=20.35 Aligned_cols=25 Identities=8% Similarity=0.065 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCccccC
Q 019965 150 EALEVAKVVARIIALALDLNADFFD 174 (333)
Q Consensus 150 ~~~~l~~~ll~~l~~~Lgl~~~~~~ 174 (333)
+-.+++..|.+++++.||.|++.+.
T Consensus 18 ~k~~l~~~l~~~l~~~lg~p~~~v~ 42 (63)
T 2x4k_A 18 QLKNLVSEVTDAVEKTTGANRQAIH 42 (63)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGCE
T ss_pred HHHHHHHHHHHHHHHHhCcCcccEE
Confidence 3467888899999999999987544
No 34
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=24.36 E-value=80 Score=27.73 Aligned_cols=16 Identities=13% Similarity=0.106 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHhcCCC
Q 019965 154 VAKVVARIIALALDLN 169 (333)
Q Consensus 154 l~~~ll~~l~~~Lgl~ 169 (333)
.|.+|.+.|++.++.+
T Consensus 186 TA~~la~~i~~~~~~~ 201 (288)
T 3ijp_A 186 TALLLGQAAAEGRNIM 201 (288)
T ss_dssp HHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHhCCC
Confidence 4666777888887754
No 35
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=24.27 E-value=79 Score=27.44 Aligned_cols=16 Identities=25% Similarity=0.187 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHhcCCC
Q 019965 154 VAKVVARIIALALDLN 169 (333)
Q Consensus 154 l~~~ll~~l~~~Lgl~ 169 (333)
.|.+|.+.|++.++.+
T Consensus 171 TA~~la~~i~~~~~~~ 186 (272)
T 4f3y_A 171 TALMMGETIAAATGRS 186 (272)
T ss_dssp HHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHhCcc
Confidence 5666777888877654
No 36
>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti}
Probab=23.86 E-value=38 Score=29.44 Aligned_cols=36 Identities=6% Similarity=0.101 Sum_probs=28.7
Q ss_pred cccEEeCCC---------cchHHHHHHHHHHhhhcCEEEEEccCC
Q 019965 16 VLHCIDLSS---------PDIHQSVSLLKQACLDCGFFYVINHGI 51 (333)
Q Consensus 16 ~iPvIDl~~---------~~~~~~~~~l~~A~~~~Gff~l~nhgi 51 (333)
.||++++.. ....++++.|.+++.+.-.+.|.|||+
T Consensus 157 ~vpv~~y~~~~g~~~~~~~~s~ela~~ia~~l~~~~avLL~nHG~ 201 (270)
T 2z7b_A 157 SVPVYEIRDKHGDETDLFGGSPDVCADIAESLGSQTVVLMARHGV 201 (270)
T ss_dssp CCCEECTHHHHCSCSCCCCCSHHHHHHHHHHHTTSSEEEETTTEE
T ss_pred CCceecccccCCcccccccCCHHHHHHHHHHhccCCEEEEcCCce
Confidence 699998631 124578889999999988999999996
No 37
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=23.69 E-value=1e+02 Score=26.15 Aligned_cols=42 Identities=7% Similarity=0.203 Sum_probs=31.9
Q ss_pred hHHHHHHHHHHhhhcCEEEEEccCCCHHHHHHHHHHHHHHhC
Q 019965 27 IHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFN 68 (333)
Q Consensus 27 ~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 68 (333)
..+..++|.++|++.++|+--|-.+-..++.++.+.+.++|.
T Consensus 87 s~e~~~~l~~aa~~~~v~~a~N~S~Gv~l~~~~~~~aa~~l~ 128 (243)
T 3qy9_A 87 KEKLLNKLDELSQNMPVFFSANMSYGVHALTKILAAAVPLLD 128 (243)
T ss_dssp HHHHHHHHHHHTTTSEEEECSSCCHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHhcCCEEEECCccHHHHHHHHHHHHHHHhcC
Confidence 345667888888888888888887777788777777776663
No 38
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=22.22 E-value=87 Score=19.78 Aligned_cols=24 Identities=8% Similarity=0.038 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHhcCCCccccC
Q 019965 151 ALEVAKVVARIIALALDLNADFFD 174 (333)
Q Consensus 151 ~~~l~~~ll~~l~~~Lgl~~~~~~ 174 (333)
-.+++..|.+++++.||.+++++.
T Consensus 17 k~~l~~~lt~~l~~~lg~~~~~v~ 40 (64)
T 3abf_A 17 KRELVRRLTEMASRLLGEPYEEVR 40 (64)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred HHHHHHHHHHHHHHHhCCCcccEE
Confidence 357888889999999999987544
No 39
>3eat_X Pyoverdine biosynthesis protein PVCB; paerucumarin, Fe/alpha-ketoglutarate dependent hydroxylase, 2-isocyano-6,7-dihydroxycoumarin; 2.50A {Pseudomonas aeruginosa}
Probab=20.21 E-value=59 Score=28.42 Aligned_cols=52 Identities=10% Similarity=-0.017 Sum_probs=35.4
Q ss_pred CcccEEeCCCcchHHHHHHHHHHhhhcCEEEEEccC-C-CHHHHHHHHHHHHHHhCC
Q 019965 15 TVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHG-I-SQEFMDEVFTQSKRFFNL 69 (333)
Q Consensus 15 ~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhg-i-~~~~~~~~~~~~~~fF~l 69 (333)
++|.=||++..-.....++|++++.++|++.+.+.. + +.+ ...+.++.|-.+
T Consensus 29 aeI~gvdl~~~l~~~~~~~L~~~l~~~gvv~fRgq~~l~~~~---~~~~~a~~fG~l 82 (293)
T 3eat_X 29 LLLEPGRPGMHVGELPAQWLKGLARSHHLLLLRGFAAFADAE---SLTRYCHDFGEV 82 (293)
T ss_dssp EEEEESSTTCBGGGSCHHHHHHHHHHHSEEEECSCBCCSSHH---HHHHHHHHHSCB
T ss_pred eEEECCCCCcCcCHHHHHHHHHHHHHhCEEEECCCCCCCCHH---HHHHHHHHhCCC
Confidence 445557776433344678899999999999999886 5 443 455566666543
Done!