BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019968
(333 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255551301|ref|XP_002516697.1| ubiquitin, putative [Ricinus communis]
gi|223544192|gb|EEF45716.1| ubiquitin, putative [Ricinus communis]
Length = 583
Score = 360 bits (925), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 191/272 (70%), Positives = 220/272 (80%), Gaps = 4/272 (1%)
Query: 3 MACVALSPVLEESLNFPGNFT--HRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVKL 60
MA VALS V EESLN N H P + SNDSILIFLSV GS+IPM VMESDSIASVKL
Sbjct: 1 MASVALSTVNEESLNLHCNLARWHGPPR-SNDSILIFLSVAGSLIPMHVMESDSIASVKL 59
Query: 61 RIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGK 120
RIQ+ GFFVKKQKLVFEGRELARSNS VRDYG+ADG VLHLVLRLSDLQAITV TVCGK
Sbjct: 60 RIQASKGFFVKKQKLVFEGRELARSNSHVRDYGVADGKVLHLVLRLSDLQAITVRTVCGK 119
Query: 121 VFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHL 180
F+FHV+RGRNVGYVKQQI+KKG+ F +L +QELICDGEELEDQR+I DICK N++VIHL
Sbjct: 120 EFKFHVQRGRNVGYVKQQISKKGKGF-NLIDQELICDGEELEDQRIIDDICKSNDSVIHL 178
Query: 181 LVRKSAKVRAKPVQKDFEVSIEATELNEKGADVVGEHQFETLFMGYQIRERKLLQNDLLL 240
LVRKSAKVR K + +DFE+SIEA +L++ VVGEHQ + L + Y+ +RK L D +L
Sbjct: 179 LVRKSAKVRTKTIDRDFELSIEALDLSDSADCVVGEHQKQALALEYRALDRKPLLQDFIL 238
Query: 241 EPLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
EPLIV +LPL++K+LI+ST GLERG P
Sbjct: 239 EPLIVNFKVELPLVLKKLINSTSLGLERGNEP 270
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 51/62 (82%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHLDD 324
G +RGLTPF IG IMCR+T+K ES IE+I++EAQDAVLP +SE FLE VASIMD LD+
Sbjct: 521 GAKRGLTPFAIGSIMCRETMKKESAIERIIQEAQDAVLPESSEAAFLECVASIMDHRLDE 580
Query: 325 LT 326
L+
Sbjct: 581 LS 582
>gi|225455384|ref|XP_002277933.1| PREDICTED: probable phosphatidylinositol 4-kinase type 2-beta
At1g26270-like [Vitis vinifera]
Length = 585
Score = 350 bits (897), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 179/275 (65%), Positives = 220/275 (80%), Gaps = 2/275 (0%)
Query: 1 MSMACVALSPVLEESLNFPGNFTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVKL 60
MS+A V++SPV E+S NFP FT R ++SILI+L+VGGSVIPM V+ESDSIASVK
Sbjct: 1 MSIASVSVSPVCEDSPNFPCYFTDRCGPCLSNSILIYLTVGGSVIPMHVLESDSIASVKR 60
Query: 61 RIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGK 120
+IQ++ G FVK QKLVFEGRELAR+NSRV+DYG+ DGNVLHLVLRLSDLQAITV +VCGK
Sbjct: 61 KIQTFKGSFVKMQKLVFEGRELARNNSRVQDYGVTDGNVLHLVLRLSDLQAITVRSVCGK 120
Query: 121 VFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHL 180
EF VER RNVGYVKQQIAK G+ F DLK+QEL CDGEELEDQRLI DICK+N+ VIHL
Sbjct: 121 ELEFQVERSRNVGYVKQQIAKTGKGFFDLKDQELTCDGEELEDQRLIHDICKKNDVVIHL 180
Query: 181 LVRKSAKVRAKPVQKDFEVSIEATELNEKGADVVG--EHQFETLFMGYQIRERKLLQNDL 238
L+ +SAKVR KP++KDF+VSI A++L++K DVV E+Q+ T ++ +RK L +D+
Sbjct: 181 LICRSAKVRTKPIKKDFKVSIVASDLSDKRDDVVDKEEYQWRTQSKEPEVVDRKSLLSDV 240
Query: 239 LLEPLIVESNFKLPLMIKRLISSTVDGLERGLTPF 273
LLEPLIV N +L ++K LI+ST+DGL RG P
Sbjct: 241 LLEPLIVNPNIELSSVVKELITSTIDGLNRGNQPI 275
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 61/83 (73%), Gaps = 4/83 (4%)
Query: 249 FKLPLMIKRLISSTV----DGLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPG 304
+ LPL R + + G ERGLTPF IG IMCR+TLK ESV+EQIV+EAQ++VLPG
Sbjct: 503 WNLPLECARTLRISTMLLKKGAERGLTPFIIGSIMCRETLKKESVMEQIVQEAQESVLPG 562
Query: 305 TSEDGFLESVASIMDRHLDDLTP 327
TSE FLE+V+ IMD LD+L+P
Sbjct: 563 TSEAAFLEAVSMIMDCRLDELSP 585
>gi|356509263|ref|XP_003523370.1| PREDICTED: uncharacterized protein LOC100812724 [Glycine max]
Length = 583
Score = 330 bits (846), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 172/271 (63%), Positives = 214/271 (78%), Gaps = 3/271 (1%)
Query: 3 MACVALSPVLEESLNFPGNFTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRI 62
MACVAL PV EESLN G FT +SILI+L+VGGSVIPM +M++DSIASVKLRI
Sbjct: 1 MACVALHPVCEESLNR-GEFTSCFSPHLRESILIYLTVGGSVIPMHIMKTDSIASVKLRI 59
Query: 63 QSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVF 122
Q++ GFFVKKQKLVFEG+ELAR+ S +RDYG+ DGNVLHLVLRLSDL+AITV T+CGK F
Sbjct: 60 QTFKGFFVKKQKLVFEGKELARNRSCIRDYGVGDGNVLHLVLRLSDLKAITVRTMCGKEF 119
Query: 123 EFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLV 182
+VE+ R+VGYVKQQIAKKG+ F+D K+QELIC+GEELEDQRLI DICK N+AVIH LV
Sbjct: 120 GLYVEKSRSVGYVKQQIAKKGQGFLDHKDQELICEGEELEDQRLIEDICKDNDAVIHFLV 179
Query: 183 RKS-AKVRAKPVQKDFEVSIEATELNEKGADVVGEHQFETLFMGYQIRERKLLQNDLLLE 241
RKS AKVR KPV KDFE+SIEA+ ++ ++ + Q ++ + ++ ER L D +LE
Sbjct: 180 RKSDAKVRTKPVDKDFELSIEASYVHNLVPNLHAD-QLGSVSVTNEVLERSQLTRDFVLE 238
Query: 242 PLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
P+I+ SN K+PL+I+ LI ST +GLE+G P
Sbjct: 239 PIIMNSNIKIPLVIQELIKSTSEGLEKGCKP 269
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 49/63 (77%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHLDD 324
G ERGLTPF +G IMCR+TLK +SVIEQIV EA++A PG SE FL+ V+ +MD HLD+
Sbjct: 521 GAERGLTPFALGSIMCRETLKKKSVIEQIVEEAEEAAFPGASEAAFLDLVSVVMDSHLDE 580
Query: 325 LTP 327
L P
Sbjct: 581 LFP 583
>gi|297812587|ref|XP_002874177.1| phosphatidylinositol 3-and 4-kinase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297320014|gb|EFH50436.1| phosphatidylinositol 3-and 4-kinase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 574
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 162/272 (59%), Positives = 196/272 (72%), Gaps = 12/272 (4%)
Query: 1 MSMACVALSPVLEESLNFPGNFTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVKL 60
MS+A VALSP LEE +NFPG L +D IL+FL++ GSVIP RVMESDSIASVKL
Sbjct: 1 MSVASVALSPALEELVNFPGTIGRFGLNL-DDPILVFLTIAGSVIPKRVMESDSIASVKL 59
Query: 61 RIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGK 120
RIQS GFFVKKQKL+++GRE R++S++RDYGLADG +LHLV+RLSDLQAI+V TV GK
Sbjct: 60 RIQSIKGFFVKKQKLLYDGREPTRNDSQIRDYGLADGKLLHLVIRLSDLQAISVRTVDGK 119
Query: 121 VFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHL 180
FE VER RNVG+VKQQIA K +E ++ EL DGEEL+DQRLITD+CK E VIHL
Sbjct: 120 EFELVVERSRNVGFVKQQIASKEKELGIPRDHELTLDGEELDDQRLITDLCKNGENVIHL 179
Query: 181 LVRKSAKVRAKPVQKDFEVSIEATELNEKGADVVGEHQFETLFMGYQIRERKLLQNDLLL 240
L+RKS KVRAKPV KDFEV IE +N K +V G L + + +
Sbjct: 180 LIRKSVKVRAKPVGKDFEVFIE--NVNHK-HNVDGRRGKNIL--------SQAKPKEFFV 228
Query: 241 EPLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
EP+IV KLPL++K LISST++GLE+G P
Sbjct: 229 EPVIVNPEIKLPLLLKELISSTLEGLEKGNGP 260
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 47/60 (78%), Gaps = 2/60 (3%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPG-TSEDGFLESVASIMDRHLD 323
G +GLT F IG IMCR+TLK+ESVIEQI+ +A+ A++P T+ED F+ +V++IMD LD
Sbjct: 511 GSAKGLTLFTIGSIMCRETLKEESVIEQIIHDAE-AIMPTETTEDEFISTVSAIMDNRLD 569
>gi|225426304|ref|XP_002268042.1| PREDICTED: uncharacterized protein LOC100249570 [Vitis vinifera]
Length = 583
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 157/274 (57%), Positives = 197/274 (71%), Gaps = 6/274 (2%)
Query: 1 MSMACVALSPVLEESLNFPGNFTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVKL 60
MS+A VA SP+ ES++ PG F +PE S++SIL++L+V GSVIP+RV+ESDSIASVK
Sbjct: 1 MSVAAVASSPIRGESVHSPGFFHGQPEPCSSESILVYLTVAGSVIPLRVLESDSIASVKF 60
Query: 61 RIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGK 120
RIQ GF VKKQKLVF GRELAR++S VRDYG+ GNVLHLVL+LSDL AITV T CGK
Sbjct: 61 RIQICQGFVVKKQKLVFGGRELARNDSLVRDYGVTSGNVLHLVLKLSDLLAITVRTACGK 120
Query: 121 VFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHL 180
FEFHV+R NVGY+KQ+I K + FVDL++ E C+G +L+DQ LI DIC ++ +IHL
Sbjct: 121 EFEFHVDRYSNVGYLKQRIVKTRKCFVDLEDHEFFCNGNKLDDQVLIDDICT-SDPIIHL 179
Query: 181 LVRKSAKVRAKPVQKDFEVSIEATELNEKGADVV--GEHQFETLFMGYQIRERKLLQNDL 238
LV+KSAKVRAKPV KDFE+S+ A + NE D GE++ E Q+ E++ D
Sbjct: 180 LVQKSAKVRAKPVDKDFELSVVAEDRNEGTRDGANEGENRSEEQL---QVVEKEPPDRDF 236
Query: 239 LLEPLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
LEP+IV K P I LI+ST DGL+ G P
Sbjct: 237 WLEPIIVNPKLKFPSFIWDLINSTFDGLDSGNHP 270
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 48/61 (78%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHLDD 324
G +RGLTPF IG IMCR TL ESVIE+IV+EAQD++LPG SE FLE+++ ++D LD
Sbjct: 521 GAQRGLTPFVIGSIMCRVTLNKESVIEEIVQEAQDSLLPGMSEAAFLETISQLIDTRLDK 580
Query: 325 L 325
L
Sbjct: 581 L 581
>gi|15237921|ref|NP_197812.1| phosphatidylinositol 3- and 4-kinase family protein / ubiquitin
family protein [Arabidopsis thaliana]
gi|10177083|dbj|BAB10389.1| ubiquitin [Arabidopsis thaliana]
gi|110741569|dbj|BAE98733.1| ubiquitin [Arabidopsis thaliana]
gi|332005891|gb|AED93274.1| phosphatidylinositol 3- and 4-kinase family protein / ubiquitin
family protein [Arabidopsis thaliana]
Length = 574
Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 160/272 (58%), Positives = 196/272 (72%), Gaps = 12/272 (4%)
Query: 1 MSMACVALSPVLEESLNFPGNFTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVKL 60
MS+A VALSP LEE +NFPG L +D IL+FL++ GSVIP RVMESDSIASVKL
Sbjct: 1 MSVASVALSPALEELVNFPGIIGRFGFNL-DDPILVFLTIAGSVIPKRVMESDSIASVKL 59
Query: 61 RIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGK 120
RIQS GFFVKKQKL+++GRE++R++S++RDYGLADG +LHLV+RLSDLQAI+V TV GK
Sbjct: 60 RIQSIKGFFVKKQKLLYDGREVSRNDSQIRDYGLADGKLLHLVIRLSDLQAISVRTVDGK 119
Query: 121 VFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHL 180
FE VER RNVGYVKQQIA K +E ++ EL DGEEL+DQRLITD+C+ + VIHL
Sbjct: 120 EFELVVERSRNVGYVKQQIASKEKELGIPRDHELTLDGEELDDQRLITDLCQNGDNVIHL 179
Query: 181 LVRKSAKVRAKPVQKDFEVSIEATELNEKGADVVGEHQFETLFMGYQIRERKLLQNDLLL 240
L+ KSAKVRAKPV KDFEV IE DV +H + E K + +
Sbjct: 180 LISKSAKVRAKPVGKDFEVFIE---------DVNHKHNVDGRRGKNISSEAK--PKEFFV 228
Query: 241 EPLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
EP IV KLP+++K LISST++GLE+G P
Sbjct: 229 EPFIVNPEIKLPILLKELISSTLEGLEKGNGP 260
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 45/59 (76%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHLD 323
G +GLTPF IG IMCR+TLK+ESVIEQI+ +A+ V T+ED F+ +V++IMD LD
Sbjct: 511 GSAKGLTPFTIGSIMCRETLKEESVIEQIIHDAEAIVPTETTEDEFISTVSAIMDNRLD 569
>gi|255564699|ref|XP_002523344.1| protein with unknown function [Ricinus communis]
gi|223537432|gb|EEF39060.1| protein with unknown function [Ricinus communis]
Length = 585
Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 161/273 (58%), Positives = 194/273 (71%), Gaps = 10/273 (3%)
Query: 1 MSMACVALSPVLEESLNFPGNFTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVKL 60
MS A VALSP+ + F+ +P S++ ILI+LSVG SVIPMRV+ SDSI SVKL
Sbjct: 1 MSSAGVALSPIQNGVVLPVDYFSAQPS--SDEYILIYLSVGRSVIPMRVLGSDSIESVKL 58
Query: 61 RIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGK 120
RIQS GF VK QKLV GREL+RSNS +RDYG+ DGNVLHLVLRLSDLQ I V T GK
Sbjct: 59 RIQSCKGFVVKNQKLVCGGRELSRSNSLIRDYGVTDGNVLHLVLRLSDLQVIKVKTTSGK 118
Query: 121 VFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICK-RNEAVIH 179
+ F VERGR+VGYVKQQ+AKK REF + E++CDGEEL+DQRLI DICK N+AVIH
Sbjct: 119 EYTFCVERGRDVGYVKQQVAKKEREFD--SDHEVVCDGEELDDQRLIDDICKYNNDAVIH 176
Query: 180 LLVRKSAKVRAKPVQKDFEVSIEATELNE----KGADVVGEHQFETLF-MGYQIRERKLL 234
LVRKS KVR KPV K+FE+SI A LNE + D+VGE T + + QI RK
Sbjct: 177 FLVRKSVKVRTKPVDKNFELSIVAPRLNEENGTRNCDIVGEENNGTKYDVDKQILFRKPP 236
Query: 235 QNDLLLEPLIVESNFKLPLMIKRLISSTVDGLE 267
D L+EP+IV +LP +IK ++++T DGLE
Sbjct: 237 DRDFLIEPIIVNPKIELPYVIKDMVNATFDGLE 269
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 51/62 (82%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHLDD 324
G+ER LTPF IG IMCR+TLK S+IE+IV+EAQD VLPGTSE FLE+V+ IMDR LD+
Sbjct: 520 GVERRLTPFAIGSIMCRETLKKASLIEEIVQEAQDCVLPGTSEVAFLETVSHIMDRRLDE 579
Query: 325 LT 326
+
Sbjct: 580 IA 581
>gi|357463917|ref|XP_003602240.1| Phosphatidylinositol 4-kinase type 2-beta [Medicago truncatula]
gi|355491288|gb|AES72491.1| Phosphatidylinositol 4-kinase type 2-beta [Medicago truncatula]
Length = 593
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 154/271 (56%), Positives = 195/271 (71%), Gaps = 7/271 (2%)
Query: 3 MACVALSPVLEESLNFPGNFTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRI 62
MAC+ L P+ E G FT +SILI+L+VGGSVIPM ++E+DSIASVKLRI
Sbjct: 1 MACLVLHPMHEN-----GEFTSSFSPHMRESILIYLTVGGSVIPMHILETDSIASVKLRI 55
Query: 63 QSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVF 122
Q+ GFFVKK KLVFEG+ELA + S V DYG+ADGNVLHLVLRLSDL+AITV T+ GK F
Sbjct: 56 QTLEGFFVKKLKLVFEGKELAHNKSCVGDYGVADGNVLHLVLRLSDLKAITVRTLSGKEF 115
Query: 123 EFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLV 182
F+VE+ RNVGYVKQQIAKKGR +L +QEL+ +GE LEDQRLI DICK N+AVIHLLV
Sbjct: 116 GFYVEKTRNVGYVKQQIAKKGRGVFNLADQELVWEGEALEDQRLIEDICKDNDAVIHLLV 175
Query: 183 RKS-AKVRAKPVQKDFEVSIEATELNEKGADVVGEHQFETLFMGYQIRERKLLQNDLLLE 241
R S +KVR KPV+KD E+SIEA ++ + + Q + + ++ +R L + LLE
Sbjct: 176 RISDSKVRTKPVEKDLELSIEALFAHDTVPNSAVD-QLGPVSITNKVLKRNQLTREFLLE 234
Query: 242 PLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
P+ SN K+P ++ LI T++GLE+G P
Sbjct: 235 PIFNNSNIKIPPVVHELIKVTLEGLEKGRKP 265
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 59/85 (69%), Gaps = 4/85 (4%)
Query: 243 LIVESNFKLPLMIKRLISSTV----DGLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQ 298
L+ ++LPL R++ + G E+GLTPF IG IMCR+TLK +SVIEQI+ +A+
Sbjct: 500 LLKSHGWELPLECARILRISTMLLQKGAEKGLTPFTIGSIMCRETLKKKSVIEQIIHKAE 559
Query: 299 DAVLPGTSEDGFLESVASIMDRHLD 323
+A LPGTSE FL+ V+ IMD HL+
Sbjct: 560 EAALPGTSEAKFLDLVSVIMDNHLE 584
>gi|297828377|ref|XP_002882071.1| phosphatidylinositol 3-and 4-kinase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297327910|gb|EFH58330.1| phosphatidylinositol 3-and 4-kinase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 566
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 149/273 (54%), Positives = 195/273 (71%), Gaps = 16/273 (5%)
Query: 1 MSMACVALSPVLEESLNFPGNFTHR-PEKLSNDSILIFLSVGGSVIPMRVMESDSIASVK 59
MS A VALSPV E L P + + +D+I+I+L++ G+VIPMRV+ESDSI SVK
Sbjct: 1 MSSAGVALSPVRSEPLIMPLVRANSCADSYPDDTIMIYLTLPGTVIPMRVLESDSIESVK 60
Query: 60 LRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCG 119
LRIQSY GF V+ QKLVF GRELARSNS +RDYG+++GN+LHLVL+LSDLQ + V T CG
Sbjct: 61 LRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGNILHLVLKLSDLQVLDVKTTCG 120
Query: 120 KVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIH 179
K FHVERGRN+GYVK+QI+KK +FVD QEL+ +GE+LEDQ LI DIC+ +++V+H
Sbjct: 121 KHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQELLYEGEKLEDQSLINDICRNDDSVLH 180
Query: 180 LLVRKSAKVRAKPVQKDFEVSIEATELNEKGADVVGEHQFETLFMGYQIRERKLLQNDLL 239
LLVR+SAKVRAKPV+K+FE+SI A + +K + +R + L
Sbjct: 181 LLVRRSAKVRAKPVEKNFELSIVAPQAKDKKG---------------READRIVPPKKLS 225
Query: 240 LEPLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
LEP+IV S K+PL++K +I S DGL+ G +P
Sbjct: 226 LEPVIVNSKAKVPLVVKDMIKSASDGLKSGNSP 258
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 59/79 (74%), Gaps = 4/79 (5%)
Query: 249 FKLPLMIKRLIS-STV---DGLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPG 304
+K+P R + ST+ G+ERGLT F+IG IMCR+TL +S++E++V EAQ+AVLPG
Sbjct: 483 WKMPAETARTLRISTMLLKKGVERGLTAFEIGTIMCRETLSKKSLVEEMVEEAQEAVLPG 542
Query: 305 TSEDGFLESVASIMDRHLD 323
TSE FLE+++ +MD HLD
Sbjct: 543 TSEAAFLEALSDVMDYHLD 561
>gi|18407090|ref|NP_566076.1| phosphoinositide 4-kinase gamma 4 [Arabidopsis thaliana]
gi|42571253|ref|NP_973700.1| phosphoinositide 4-kinase gamma 4 [Arabidopsis thaliana]
gi|16930425|gb|AAL31898.1|AF419566_1 At2g46500/F11C10.19 [Arabidopsis thaliana]
gi|4415931|gb|AAD20161.1| expressed protein [Arabidopsis thaliana]
gi|20197828|gb|AAM15268.1| expressed protein [Arabidopsis thaliana]
gi|27363382|gb|AAO11610.1| At2g46500/F11C10.19 [Arabidopsis thaliana]
gi|330255614|gb|AEC10708.1| phosphoinositide 4-kinase gamma 4 [Arabidopsis thaliana]
gi|330255615|gb|AEC10709.1| phosphoinositide 4-kinase gamma 4 [Arabidopsis thaliana]
Length = 566
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 149/275 (54%), Positives = 194/275 (70%), Gaps = 20/275 (7%)
Query: 1 MSMACVALSPVLEESLNFPGNFTHRP-EKLSNDSILIFLSVGGSVIPMRVMESDSIASVK 59
MS A VALSPV E L P + + +D+I+I+L++ GSVIPMRV+ESDSI SVK
Sbjct: 1 MSSAGVALSPVRSEPLIMPLVRANSCLDSYPDDTIMIYLTLPGSVIPMRVLESDSIESVK 60
Query: 60 LRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCG 119
LRIQSY GF V+ QKLVF GRELARSNS +RDYG+++GN+LHLVL+LSDLQ + V T CG
Sbjct: 61 LRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGNILHLVLKLSDLQVLDVKTTCG 120
Query: 120 KVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIH 179
K FHVERGRN+GYVK+QI+KK +FVD QE++ +GE+LEDQ LI DIC+ +++V+H
Sbjct: 121 KHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRNDDSVLH 180
Query: 180 LLVRKSAKVRAKPVQKDFEVSIEATELNEKGADVVGEHQFETLFMGYQIRERKLL--QND 237
LLVR+SAKVR KPV+K+FE+SI A + +K RE K +
Sbjct: 181 LLVRRSAKVRVKPVEKNFELSIVAPQAKDKKG-----------------REAKSIVPPKK 223
Query: 238 LLLEPLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
L LEP++V S K+PL++K +I S DGL+ G +P
Sbjct: 224 LSLEPVVVNSKAKVPLVVKDMIQSASDGLKSGNSP 258
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 50/59 (84%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHLD 323
G+ERGLT F+IG IMCR+TL +S++E++V EAQ+AVLPGTSE FLE+++ +MD HLD
Sbjct: 503 GVERGLTAFEIGTIMCRETLSKKSLVEEMVEEAQEAVLPGTSEAAFLEALSDVMDYHLD 561
>gi|297742348|emb|CBI34497.3| unnamed protein product [Vitis vinifera]
Length = 516
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 149/272 (54%), Positives = 184/272 (67%), Gaps = 31/272 (11%)
Query: 1 MSMACVALSPVLEESLNFPGNFTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVKL 60
MS+A VA SP+ ES++ PG F +PE S++SIL++L+V GSVIP+RV+ESDSIASVK
Sbjct: 1 MSVAAVASSPIRGESVHSPGFFHGQPEPCSSESILVYLTVAGSVIPLRVLESDSIASVKF 60
Query: 61 RIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGK 120
RIQ GF VKKQKLVF GRELAR++S VRDYG+ GNVLHLVL+LSDL AITV T CGK
Sbjct: 61 RIQICQGFVVKKQKLVFGGRELARNDSLVRDYGVTSGNVLHLVLKLSDLLAITVRTACGK 120
Query: 121 VFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHL 180
FEFHV+R NVGY+KQ+I K + FVDL++ E C+G +L+DQ LI DIC ++ +IHL
Sbjct: 121 EFEFHVDRYSNVGYLKQRIVKTRKCFVDLEDHEFFCNGNKLDDQVLIDDICT-SDPIIHL 179
Query: 181 LVRKSAKVRAKPVQKDFEVSIEATELNEKGADVVGEHQFETLFMGYQIRERKLLQNDLLL 240
LV+KSAKVRAKPV KDFE+S+E + D L
Sbjct: 180 LVQKSAKVRAKPVDKDFELSVEPPD------------------------------RDFWL 209
Query: 241 EPLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
EP+IV K P I LI+ST DGL+ G P
Sbjct: 210 EPIIVNPKLKFPSFIWDLINSTFDGLDSGNHP 241
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 48/61 (78%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHLDD 324
G +RGLTPF IG IMCR TL ESVIE+IV+EAQD++LPG SE FLE+++ ++D LD
Sbjct: 454 GAQRGLTPFVIGSIMCRVTLNKESVIEEIVQEAQDSLLPGMSEAAFLETISQLIDTRLDK 513
Query: 325 L 325
L
Sbjct: 514 L 514
>gi|334184947|ref|NP_001189762.1| phosphoinositide 4-kinase gamma 4 [Arabidopsis thaliana]
gi|330255616|gb|AEC10710.1| phosphoinositide 4-kinase gamma 4 [Arabidopsis thaliana]
Length = 419
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 150/277 (54%), Positives = 194/277 (70%), Gaps = 24/277 (8%)
Query: 1 MSMACVALSPVLEESLNFP---GNFTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIAS 57
MS A VALSPV E L P N + +D+I+I+L++ GSVIPMRV+ESDSI S
Sbjct: 1 MSSAGVALSPVRSEPLIMPLVRANSCL--DSYPDDTIMIYLTLPGSVIPMRVLESDSIES 58
Query: 58 VKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTV 117
VKLRIQSY GF V+ QKLVF GRELARSNS +RDYG+++GN+LHLVL+LSDLQ + V T
Sbjct: 59 VKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGNILHLVLKLSDLQVLDVKTT 118
Query: 118 CGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAV 177
CGK FHVERGRN+GYVK+QI+KK +FVD QE++ +GE+LEDQ LI DIC+ +++V
Sbjct: 119 CGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRNDDSV 178
Query: 178 IHLLVRKSAKVRAKPVQKDFEVSIEATELNEKGADVVGEHQFETLFMGYQIRERKLL--Q 235
+HLLVR+SAKVR KPV+K+FE+SI A + +K RE K +
Sbjct: 179 LHLLVRRSAKVRVKPVEKNFELSIVAPQAKDKKG-----------------REAKSIVPP 221
Query: 236 NDLLLEPLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
L LEP++V S K+PL++K +I S DGL+ G +P
Sbjct: 222 KKLSLEPVVVNSKAKVPLVVKDMIQSASDGLKSGNSP 258
>gi|222423998|dbj|BAH19960.1| AT2G46500 [Arabidopsis thaliana]
Length = 566
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 148/275 (53%), Positives = 193/275 (70%), Gaps = 20/275 (7%)
Query: 1 MSMACVALSPVLEESLNFPGNFTHRP-EKLSNDSILIFLSVGGSVIPMRVMESDSIASVK 59
MS A VALSPV E L P + + +D+I+I+L++ GSVIPMRV+ESDSI SVK
Sbjct: 1 MSSAGVALSPVRSEPLIMPLVRANSCLDSYPDDTIMIYLTLPGSVIPMRVLESDSIESVK 60
Query: 60 LRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCG 119
LRIQSY GF V+ QKLVF GRELARSNS +RDYG+++GN+LHLVL+LSDLQ + V T CG
Sbjct: 61 LRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGNILHLVLKLSDLQVLDVKTTCG 120
Query: 120 KVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIH 179
K FHVERGRN+GYVK+QI+KK +FVD QE++ +GE+LEDQ LI IC+ +++V+H
Sbjct: 121 KHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINGICRNDDSVLH 180
Query: 180 LLVRKSAKVRAKPVQKDFEVSIEATELNEKGADVVGEHQFETLFMGYQIRERKLL--QND 237
LLVR+SAKVR KPV+K+FE+SI A + +K RE K +
Sbjct: 181 LLVRRSAKVRVKPVEKNFELSIVAPQAKDKKG-----------------REAKSIVPPKK 223
Query: 238 LLLEPLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
L LEP++V S K+PL++K +I S DGL+ G +P
Sbjct: 224 LSLEPVVVNSKAKVPLVVKDMIQSASDGLKSGNSP 258
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 50/59 (84%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHLD 323
G+ERGLT F+IG IMCR+TL +S++E++V EAQ+AVLPGTSE FLE+++ +MD HLD
Sbjct: 503 GVERGLTAFEIGTIMCRETLSKKSLVEEMVEEAQEAVLPGTSEAAFLEALSDVMDYHLD 561
>gi|302143901|emb|CBI23006.3| unnamed protein product [Vitis vinifera]
Length = 455
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 136/187 (72%), Positives = 158/187 (84%)
Query: 1 MSMACVALSPVLEESLNFPGNFTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVKL 60
MS+A V++SPV E+S NFP FT R ++SILI+L+VGGSVIPM V+ESDSIASVK
Sbjct: 1 MSIASVSVSPVCEDSPNFPCYFTDRCGPCLSNSILIYLTVGGSVIPMHVLESDSIASVKR 60
Query: 61 RIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGK 120
+IQ++ G FVK QKLVFEGRELAR+NSRV+DYG+ DGNVLHLVLRLSDLQAITV +VCGK
Sbjct: 61 KIQTFKGSFVKMQKLVFEGRELARNNSRVQDYGVTDGNVLHLVLRLSDLQAITVRSVCGK 120
Query: 121 VFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHL 180
EF VER RNVGYVKQQIAK G+ F DLK+QEL CDGEELEDQRLI DICK+N+ VIHL
Sbjct: 121 ELEFQVERSRNVGYVKQQIAKTGKGFFDLKDQELTCDGEELEDQRLIHDICKKNDVVIHL 180
Query: 181 LVRKSAK 187
L+ +SAK
Sbjct: 181 LICRSAK 187
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 61/83 (73%), Gaps = 4/83 (4%)
Query: 249 FKLPLMIKRLISSTV----DGLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPG 304
+ LPL R + + G ERGLTPF IG IMCR+TLK ESV+EQIV+EAQ++VLPG
Sbjct: 373 WNLPLECARTLRISTMLLKKGAERGLTPFIIGSIMCRETLKKESVMEQIVQEAQESVLPG 432
Query: 305 TSEDGFLESVASIMDRHLDDLTP 327
TSE FLE+V+ IMD LD+L+P
Sbjct: 433 TSEAAFLEAVSMIMDCRLDELSP 455
>gi|147863013|emb|CAN82992.1| hypothetical protein VITISV_009587 [Vitis vinifera]
Length = 576
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 146/273 (53%), Positives = 195/273 (71%), Gaps = 3/273 (1%)
Query: 1 MSMACVALSPVLEESLNFPGNFTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVKL 60
MS A + L+ + E++ +F +P SN+SILI+L+ GS+IPMRVM SDSI +VKL
Sbjct: 1 MSSAALVLASINSEAIFSHNHFHTQPGLFSNESILIYLAFSGSMIPMRVMGSDSIEAVKL 60
Query: 61 RIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGK 120
RIQ+ GF VKKQKLV GRELARS++ VRDYG++DGNV HLVL+LSDLQ I V T G+
Sbjct: 61 RIQNCGGF-VKKQKLVCGGRELARSDTLVRDYGVSDGNVFHLVLKLSDLQIINVRTAYGE 119
Query: 121 VFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHL 180
F FHVER R+VGYVKQQ+AKKG+ VD+++QE++CDG+ +EDQRLI DIC+ ++AV+HL
Sbjct: 120 EFTFHVERSRDVGYVKQQVAKKGKGLVDVEDQEIVCDGKRVEDQRLIDDICEHSDAVLHL 179
Query: 181 LVRKSAKVRAKPVQKDFEVSIEATELNEKGADVVGEHQFETLFMGYQIRERKLLQNDLLL 240
LVRKSAK+ +PV+K+F++S+ ELNEK D G E + I RK D L
Sbjct: 180 LVRKSAKISCRPVRKNFKLSVVTAELNEK-KDYDGVDG-ERGCVSKDIVPRKPHNKDDWL 237
Query: 241 EPLIVESNFKLPLMIKRLISSTVDGLERGLTPF 273
EP+IV +L +++ LI+ST +GL+ G P
Sbjct: 238 EPIIVNQKVELSPVMRSLINSTSNGLDAGNYPL 270
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 57/82 (69%), Gaps = 4/82 (4%)
Query: 249 FKLPLMIKRLIS-STV---DGLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPG 304
+ LPL R++ ST+ G E GLTPF IG +MCR+TL +S+IE+IV EAQ ++LP
Sbjct: 494 WDLPLECARILRISTMLLKKGAELGLTPFAIGSVMCRETLNTKSMIEEIVLEAQASMLPD 553
Query: 305 TSEDGFLESVASIMDRHLDDLT 326
S+ FLESV+ IMDR L +++
Sbjct: 554 FSDASFLESVSQIMDRRLSEIS 575
>gi|225470906|ref|XP_002263546.1| PREDICTED: probable phosphatidylinositol 4-kinase type 2-beta
At1g26270-like [Vitis vinifera]
Length = 576
Score = 270 bits (690), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 146/273 (53%), Positives = 195/273 (71%), Gaps = 3/273 (1%)
Query: 1 MSMACVALSPVLEESLNFPGNFTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVKL 60
MS A + L+ + E++ +F +P SN+SILI+L+ GS+IPMRVM SDSI +VKL
Sbjct: 1 MSSAALVLASINSEAIFSHNHFHTQPGLFSNESILIYLAFSGSMIPMRVMGSDSIEAVKL 60
Query: 61 RIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGK 120
RIQ+ GF VKKQKLV GRELARS++ VRDYG++DGNV HLVL+LSDLQ I V T G+
Sbjct: 61 RIQNCGGF-VKKQKLVCGGRELARSDTLVRDYGVSDGNVFHLVLKLSDLQIINVRTAYGE 119
Query: 121 VFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHL 180
F FHVER R+VGYVKQQ+AKKG+ VD+++QE++CDG+ +EDQRLI DIC+ ++AV+HL
Sbjct: 120 EFTFHVERSRDVGYVKQQVAKKGKGLVDVEDQEIVCDGKRVEDQRLIDDICEHSDAVLHL 179
Query: 181 LVRKSAKVRAKPVQKDFEVSIEATELNEKGADVVGEHQFETLFMGYQIRERKLLQNDLLL 240
LVRKSAK+ +PV+K+F++S+ ELNEK D G E + I RK D L
Sbjct: 180 LVRKSAKISCRPVRKNFKLSVVTAELNEK-KDYDGVDG-ERGCVSKDIVPRKPHNKDDWL 237
Query: 241 EPLIVESNFKLPLMIKRLISSTVDGLERGLTPF 273
EP+IV +L +++ LI+ST +GL+ G P
Sbjct: 238 EPIIVNQKVELSPVMRSLINSTSNGLDAGNYPL 270
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 55/82 (67%), Gaps = 4/82 (4%)
Query: 249 FKLPLMIKRLISSTV----DGLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPG 304
+ LPL R++ + G E GLTPF IG +MCR+TL +S+IE+IV EAQ ++LP
Sbjct: 494 WDLPLECARILRISTMLLKKGAELGLTPFAIGSVMCRETLNTKSMIEEIVLEAQASMLPD 553
Query: 305 TSEDGFLESVASIMDRHLDDLT 326
S+ FLESV+ IMDR L +++
Sbjct: 554 FSDASFLESVSQIMDRRLSEIS 575
>gi|224132798|ref|XP_002321412.1| predicted protein [Populus trichocarpa]
gi|222868408|gb|EEF05539.1| predicted protein [Populus trichocarpa]
Length = 186
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 138/187 (73%), Positives = 160/187 (85%), Gaps = 1/187 (0%)
Query: 1 MSMACVALSPVLEESLNFPGNFTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVKL 60
MSMA VALSPV +ESL+ NF S+DSI IFL VG S+IP++VMESDSIASVKL
Sbjct: 1 MSMASVALSPVHDESLDSHRNFPWLCGLRSSDSIGIFLVVGRSIIPLQVMESDSIASVKL 60
Query: 61 RIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGK 120
RIQ+ GFFVKKQKLVFEGRELAR NS+VRDYG+ADG VLHLV+RLS+LQAITV TVCGK
Sbjct: 61 RIQASQGFFVKKQKLVFEGRELARGNSQVRDYGVADGKVLHLVVRLSNLQAITVGTVCGK 120
Query: 121 VFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHL 180
V++F V+RGR+VGYVK+QIAK+G+ L +QEL+CDGEELEDQRLITDICK N+AVIHL
Sbjct: 121 VYKFRVDRGRSVGYVKKQIAKRGKGLA-LVDQELVCDGEELEDQRLITDICKGNDAVIHL 179
Query: 181 LVRKSAK 187
L+RKSAK
Sbjct: 180 LIRKSAK 186
>gi|224120792|ref|XP_002318418.1| predicted protein [Populus trichocarpa]
gi|222859091|gb|EEE96638.1| predicted protein [Populus trichocarpa]
Length = 166
Score = 264 bits (674), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 131/165 (79%), Positives = 150/165 (90%), Gaps = 1/165 (0%)
Query: 47 MRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRL 106
MRVMESDSIASVKLRIQ+ GFFVKKQKLVFEGRELAR+NS+VRDYG+ADG VLHLVLRL
Sbjct: 1 MRVMESDSIASVKLRIQASEGFFVKKQKLVFEGRELARNNSQVRDYGVADGKVLHLVLRL 60
Query: 107 SDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRL 166
DLQ ITV TVCGKV +FHV+RGR+VGYVK+QIA+KG+ F +L QELICDGEELEDQRL
Sbjct: 61 YDLQTITVRTVCGKVCDFHVDRGRSVGYVKKQIARKGKCF-ELVEQELICDGEELEDQRL 119
Query: 167 ITDICKRNEAVIHLLVRKSAKVRAKPVQKDFEVSIEATELNEKGA 211
ITDICK N++VIHLL+RKSAKVR KPV+KDFE+S+EA +LN+K A
Sbjct: 120 ITDICKSNDSVIHLLIRKSAKVRVKPVEKDFELSVEALDLNDKEA 164
>gi|255537819|ref|XP_002509976.1| protein with unknown function [Ricinus communis]
gi|223549875|gb|EEF51363.1| protein with unknown function [Ricinus communis]
Length = 584
Score = 263 bits (672), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 152/277 (54%), Positives = 202/277 (72%), Gaps = 10/277 (3%)
Query: 1 MSMACVALSPVLEESLNFPG--NFTHRPEKLSNDS-ILIFLSVGGSVIPMRVMESDSIAS 57
MS+ VALSP+ +ES +F G N + + + DS ILI+LSV GS+IPMRV+ESDSIAS
Sbjct: 1 MSVVDVALSPIRKESKSFHGYCNNSQQGTTVPEDSSILIYLSVAGSLIPMRVLESDSIAS 60
Query: 58 VKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTV 117
VKLRIQ+ GF VKKQKLVF GRELAR++S V+DYG+ +G +LHLVL+LSDL ITV T
Sbjct: 61 VKLRIQTCKGFVVKKQKLVFGGRELARNDSLVKDYGVTNGKILHLVLKLSDLLLITVRTT 120
Query: 118 CGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAV 177
CG+ FEFHV+R RNVGYVKQ+I K+G+ FVD+ QE+ +GE+L+DQR+I DIC N+A
Sbjct: 121 CGREFEFHVDRYRNVGYVKQRIFKEGKGFVDVVEQEIFYNGEKLDDQRVIGDICSNNDAA 180
Query: 178 IHLLVRKSAKVRAKPVQKDFEVSIEATELNEKGADVV--GEHQFETLFMGYQIRERKLLQ 235
IHLLV+KSA VRAKP++KDFE+SI A + +++ V G++Q E L Q+ +K
Sbjct: 181 IHLLVQKSAHVRAKPLEKDFEISIVAADSSDRRESAVEGGKNQSEEL----QVL-KKQSG 235
Query: 236 NDLLLEPLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
D L+P+I+ +L + +++ST DGLERG P
Sbjct: 236 RDFWLKPVIINPKIRLNSVFWDMVNSTFDGLERGKPP 272
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
Query: 243 LIVESNFKLPLMIKRLISSTV----DGLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQ 298
L+ + PL R + + G++RGLTPF IG IMCR+ L ES IE+IVREA+
Sbjct: 496 LLKSHGWNFPLESARTLRISTMLLKKGVKRGLTPFAIGSIMCRENLSKESEIEEIVREAE 555
Query: 299 DAVLPGTSEDGFLESVASIMDRHLDDL 325
D++LPG E FLE+V+ IMD LD L
Sbjct: 556 DSLLPGMGETLFLETVSKIMDSQLDKL 582
>gi|224053771|ref|XP_002297971.1| predicted protein [Populus trichocarpa]
gi|222845229|gb|EEE82776.1| predicted protein [Populus trichocarpa]
Length = 583
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 141/275 (51%), Positives = 196/275 (71%), Gaps = 7/275 (2%)
Query: 1 MSMACVALSPVLEESLNF-PGNFTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVK 59
MS+ V LSP+ +ES +F PG + + + SILI++SVGGS IPMRV ESDSIA+VK
Sbjct: 1 MSVVDVGLSPIFKESGHFLPGYCGQKGPVIEDSSILIYISVGGSSIPMRVFESDSIAAVK 60
Query: 60 LRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCG 119
LRIQ+ GF V KQKLVF GRELAR++S V+DYG+ GNVLHLVL+LSDL + V T G
Sbjct: 61 LRIQTRKGFVVNKQKLVFGGRELARNDSLVKDYGVTRGNVLHLVLKLSDLLFVIVRTNSG 120
Query: 120 KVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIH 179
+ FEFHV+R RNVGY+KQ+I K+G+ FVD+++QE+ +G++L+DQ+++ DIC N+A IH
Sbjct: 121 EEFEFHVDRFRNVGYIKQRIFKEGKGFVDVEDQEIFFNGKKLDDQKIVDDICNDNDAAIH 180
Query: 180 LLVRKSAKVRAKPVQKDFEVSIEATELNEKGADVV--GEHQFETLFMGYQIRERKLLQND 237
LLV KSAKVRAKP++KDFE+ + A+ EK + GE++ E + + + R + +
Sbjct: 181 LLVEKSAKVRAKPLEKDFEILVVASNSTEKRDRSIDGGENRSEEVLVLSKERSGR----N 236
Query: 238 LLLEPLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
+LEP+IV KL + +I+S + GLE+G P
Sbjct: 237 FMLEPVIVNPKVKLNSVFWNMINSALGGLEKGNAP 271
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 59/82 (71%), Gaps = 4/82 (4%)
Query: 249 FKLPLMIKRLISSTV----DGLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPG 304
+ +PL R++ + G+ERGLTPF IG IMCR+ L ESVIE+I+REA+D++LPG
Sbjct: 501 WNIPLECARVLRISTMLLKKGVERGLTPFAIGSIMCRENLNKESVIEEIIREAEDSLLPG 560
Query: 305 TSEDGFLESVASIMDRHLDDLT 326
SE FLE+V++IMD LD+ T
Sbjct: 561 MSEAAFLEAVSNIMDYRLDEFT 582
>gi|297745471|emb|CBI40551.3| unnamed protein product [Vitis vinifera]
Length = 527
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 120/200 (60%), Positives = 159/200 (79%), Gaps = 1/200 (0%)
Query: 1 MSMACVALSPVLEESLNFPGNFTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVKL 60
MS A + L+ + E++ +F +P SN+SILI+L+ GS+IPMRVM SDSI +VKL
Sbjct: 27 MSSAALVLASINSEAIFSHNHFHTQPGLFSNESILIYLAFSGSMIPMRVMGSDSIEAVKL 86
Query: 61 RIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGK 120
RIQ+ GF VKKQKLV GRELARS++ VRDYG++DGNV HLVL+LSDLQ I V T G+
Sbjct: 87 RIQNCGGF-VKKQKLVCGGRELARSDTLVRDYGVSDGNVFHLVLKLSDLQIINVRTAYGE 145
Query: 121 VFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHL 180
F FHVER R+VGYVKQQ+AKKG+ VD+++QE++CDG+ +EDQRLI DIC+ ++AV+HL
Sbjct: 146 EFTFHVERSRDVGYVKQQVAKKGKGLVDVEDQEIVCDGKRVEDQRLIDDICEHSDAVLHL 205
Query: 181 LVRKSAKVRAKPVQKDFEVS 200
LVRKSAK+ +PV+K+F++S
Sbjct: 206 LVRKSAKISCRPVRKNFKLS 225
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 55/82 (67%), Gaps = 4/82 (4%)
Query: 249 FKLPLMIKRLISSTV----DGLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPG 304
+ LPL R++ + G E GLTPF IG +MCR+TL +S+IE+IV EAQ ++LP
Sbjct: 445 WDLPLECARILRISTMLLKKGAELGLTPFAIGSVMCRETLNTKSMIEEIVLEAQASMLPD 504
Query: 305 TSEDGFLESVASIMDRHLDDLT 326
S+ FLESV+ IMDR L +++
Sbjct: 505 FSDASFLESVSQIMDRRLSEIS 526
>gi|356511443|ref|XP_003524436.1| PREDICTED: uncharacterized protein LOC100809172 [Glycine max]
Length = 568
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 134/270 (49%), Positives = 181/270 (67%), Gaps = 19/270 (7%)
Query: 6 VALSPVLEESLNFPGNFTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSY 65
+ALS V +E +++ G +P S + ILI+L+V G+V PMRV ESDSIASVKLRIQ
Sbjct: 3 IALSSVCKEKVHWEG----QPGHCSGEPILIYLTVDGAVTPMRVFESDSIASVKLRIQQC 58
Query: 66 NGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFH 125
GF VKKQKLVF GRELAR+ + +++YG+ DGNVLHLVLRLSDL I V TV GK FEFH
Sbjct: 59 KGFVVKKQKLVFSGRELARNGTLIKEYGVTDGNVLHLVLRLSDLLFIVVRTVSGKEFEFH 118
Query: 126 VERGRNVGYVKQQI-AKKGREFVDLK-NQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
++R RNVGY+KQ+I KKG F+DL+ +QEL C+ E+L+DQ L DICK ++ VIHL+++
Sbjct: 119 IDRHRNVGYLKQRIRKKKGEGFIDLEDDQELFCNDEKLDDQSLFHDICKSDDDVIHLIIK 178
Query: 184 KSAKVRAKPVQKDFEVSIEATELNEKGADVVGEHQFETLFMGYQIRERKLLQN-DLLLEP 242
KSAKVR P+ KD +S+EA K H++E ++ K+ + LEP
Sbjct: 179 KSAKVRTTPIHKDLNLSVEAPAKRVK-------HKWEK-----HVQIAKVPPDVGFWLEP 226
Query: 243 LIVESNFKLPLMIKRLISSTVDGLERGLTP 272
+IV + +I+ST +GL++G P
Sbjct: 227 IIVNPKINFFPFLWDMINSTFEGLKKGNHP 256
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 55/82 (67%), Gaps = 4/82 (4%)
Query: 249 FKLPLMIKRLISSTV----DGLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPG 304
+ +PL R + + G+ERGLTP+ IG IMCR+ L ESVIE+I+ EAQD++LPG
Sbjct: 486 WDIPLECARTLRISTMLLKKGVERGLTPYAIGSIMCRENLNKESVIEEIIGEAQDSLLPG 545
Query: 305 TSEDGFLESVASIMDRHLDDLT 326
E FLE+++ IMD HLD L
Sbjct: 546 MEESAFLEAISQIMDYHLDKLA 567
>gi|449445652|ref|XP_004140586.1| PREDICTED: uncharacterized protein LOC101209114 [Cucumis sativus]
gi|449523157|ref|XP_004168591.1| PREDICTED: uncharacterized LOC101209114 [Cucumis sativus]
Length = 597
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 136/284 (47%), Positives = 175/284 (61%), Gaps = 13/284 (4%)
Query: 2 SMACVALSPVLEESLNFPGNFTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVKLR 61
S +AL PV E L + SN+SI I++SV GS+ PM + S+SI SVKLR
Sbjct: 3 SAGVIALCPVRNEHLVYHKRLITPSALESNESIWIYVSVSGSMSPMPIFASESIESVKLR 62
Query: 62 IQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKV 121
IQS GF VKKQKLV GREL+R+NS VRDYG+ DGNVLHLVLRLSDLQ I V T CGK
Sbjct: 63 IQSCKGFVVKKQKLVCGGRELSRNNSLVRDYGVTDGNVLHLVLRLSDLQVINVKTYCGKE 122
Query: 122 FEFHVERGRNVGYVKQQIAKKGREF-VDLKNQELICDGEELEDQRLITDICKRNEAVIHL 180
F FHVER R+V YVK++IA K +EF + E++CDG L+D L+ DIC R +AVIHL
Sbjct: 123 FTFHVERDRDVAYVKEKIATKVKEFVDVVDEHEVVCDGNPLDDHSLVDDICNRQDAVIHL 182
Query: 181 LVRKSAKVRAKPVQKDFEVSIEATELNEKGADVVGEHQFETLFM----GYQIR------- 229
VRKSAKVR +PV K+FE+SI A+ E+ + + Y+ +
Sbjct: 183 FVRKSAKVRGRPVDKNFELSIVASNFEEQCKSEFSRENNQKEYNEDKEAYRTKYEYDKES 242
Query: 230 -ERKLLQNDLLLEPLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
R ++EP++V +LP I +++STVDGL+ G P
Sbjct: 243 APRPYPNGGSVMEPIVVNPKVELPKPIWDMVNSTVDGLDCGHFP 286
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 55/82 (67%), Gaps = 4/82 (4%)
Query: 249 FKLPLMIKRLIS-STV---DGLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPG 304
+ LPL R + ST+ G +RGLTPFDIG MCR+TL +S+IE+ V EA D+++PG
Sbjct: 512 WDLPLECARTLRISTMLLKKGAKRGLTPFDIGSFMCRETLTKKSMIEECVEEAIDSLVPG 571
Query: 305 TSEDGFLESVASIMDRHLDDLT 326
TSE FLESV IMD LD +
Sbjct: 572 TSEATFLESVYEIMDLRLDQIA 593
>gi|356495721|ref|XP_003516722.1| PREDICTED: probable phosphatidylinositol 4-kinase type 2-beta
At1g26270-like [Glycine max]
Length = 569
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 136/276 (49%), Positives = 181/276 (65%), Gaps = 23/276 (8%)
Query: 1 MSMACVALSPVLEESLNFPGNFTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVKL 60
MS++ VA+ P+L++S+++ G + S +SI I+L+V G++ PMRV+ESDSIASVK+
Sbjct: 1 MSVSEVAVRPILKKSVHWQG-------RCSGESIRIYLTVDGALRPMRVLESDSIASVKM 53
Query: 61 RIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGK 120
RIQ+ G KK KLV+ GRELAR ++ ++DYG+ GNVLHLVLRLSD+ I V T CGK
Sbjct: 54 RIQACKGIAGKKHKLVYGGRELARKDALIKDYGVTAGNVLHLVLRLSDMIFIVVRTACGK 113
Query: 121 VFEFHVERGRNVGYVKQQI-AKKGREFVDLK-NQELICDGEELEDQRLITDICKRNEA-- 176
FEF ++R RNVGY+KQ+I KKG F+DL+ +QEL C GEEL DQRL DIC ++A
Sbjct: 114 EFEFQIDRHRNVGYLKQRIKKKKGEGFIDLEGDQELFCGGEELHDQRLFRDICNTDDADG 173
Query: 177 VIHLLVRKSAKVRAKPVQKDFEVSIEATELNEKGADVVGEHQFETLFMGYQIRERKLLQN 236
VIHL+VR SAKV AKPV KD E+S+ A + A+ E+Q +I L
Sbjct: 174 VIHLVVRNSAKVNAKPVHKDLELSVVA----DGSAEGEKENQVTP-----KIPPPGL--- 221
Query: 237 DLLLEPLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
D LEP+ V + LI ST DGL++G P
Sbjct: 222 DFWLEPVFVNPKVSFFPFLWDLIGSTFDGLKKGNNP 257
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 49/62 (79%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHLDD 324
G+ERGLTP+DIG IMCR+ L ESVIE+I+ EAQ+++LPG E FLESV+ IMD LD
Sbjct: 507 GVERGLTPYDIGSIMCRENLNKESVIEEIICEAQESLLPGMEESVFLESVSQIMDSRLDK 566
Query: 325 LT 326
L+
Sbjct: 567 LS 568
>gi|356527682|ref|XP_003532437.1| PREDICTED: uncharacterized protein LOC100782882 [Glycine max]
Length = 569
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 129/271 (47%), Positives = 177/271 (65%), Gaps = 20/271 (7%)
Query: 6 VALSPVLEESLNFPGNFTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSY 65
+ALS V +E +N+ G +P S + ILI+L+V G+V PMRV+ESDSIASVKLRIQ
Sbjct: 3 IALSSVCKEKVNWEG----QPGHCSGEPILIYLTVDGAVTPMRVLESDSIASVKLRIQQC 58
Query: 66 NGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFH 125
GF VKKQKLVF GRELAR+ + +++YG+ DGNVLHLVLRLSDL I V TV GK FEFH
Sbjct: 59 KGFVVKKQKLVFSGRELARNGTLIKEYGVTDGNVLHLVLRLSDLLFIVVRTVSGKEFEFH 118
Query: 126 VERGRNVGYVKQQIAK-KGREFVDLK--NQELICDGEELEDQRLITDICKRNEAVIHLLV 182
++R RNVGY+KQ+I K KG F+DL+ +QE C+ ++L+D L DICK + VIHL++
Sbjct: 119 IDRHRNVGYLKQRIRKNKGECFIDLEDDDQEFFCNDQKLDDDSLFHDICKSGDDVIHLII 178
Query: 183 RKSAKVRAKPVQKDFEVSIEATELNEKGADVVGEHQFETLFMGYQIRERKLLQN-DLLLE 241
+KS KVR P+ KD +S+ A G V +H+ + ++ K+ + LE
Sbjct: 179 KKSVKVRTTPIHKDLNLSVVAP-----GESV--KHKRDK-----HVQIAKVPPDVGFWLE 226
Query: 242 PLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
P+IV + ++ ST +GL++G P
Sbjct: 227 PIIVNPKIIFFPFLWDMVKSTFEGLKKGNHP 257
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 55/82 (67%), Gaps = 4/82 (4%)
Query: 249 FKLPLMIKRLISSTV----DGLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPG 304
+ +PL R + + G+ERGLTP+ IG IMCR+ L ESVIE+I+ EAQD++LPG
Sbjct: 487 WDIPLECARTLRISTMLLKKGVERGLTPYAIGSIMCRENLNKESVIEEIIGEAQDSLLPG 546
Query: 305 TSEDGFLESVASIMDRHLDDLT 326
E FLE+++ IMD HLD L
Sbjct: 547 MEESAFLEAISQIMDYHLDKLA 568
>gi|47777373|gb|AAT38007.1| putative ubiquitin [Oryza sativa Japonica Group]
Length = 612
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 126/250 (50%), Positives = 163/250 (65%), Gaps = 18/250 (7%)
Query: 25 RPEKLSNDSILIFLSVGG-SVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELA 83
RP + +SILI+L+ G S++PMRVM SDSIASVKLR+Q+ GF V+KQKLVF+GRELA
Sbjct: 31 RPPHCAAESILIYLTAPGLSMMPMRVMASDSIASVKLRVQTSKGFVVRKQKLVFDGRELA 90
Query: 84 RSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKG 143
R++SR+ DYG++ GNVLHLV+R+SDL+ ITV TV G F F VE GR VGYVKQQIAK
Sbjct: 91 RNDSRIMDYGVSHGNVLHLVIRISDLRLITVQTVHGNKFRFRVEPGRTVGYVKQQIAKNS 150
Query: 144 REFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVRAKPVQKDFEVSIEA 203
D + L+ GE L+D LI D+C+ + AVIHLLV +SAK+ A+PV +DFEVSI A
Sbjct: 151 TH--DDDHHSLVLQGEVLDDAHLIHDVCRTDGAVIHLLVHRSAKLAARPVDRDFEVSIVA 208
Query: 204 TELNEKGADVVGEHQFETLFMGYQIRERKLLQNDLLLEPLIVESNFKLPLMIKRLISSTV 263
N TL LQ D +EP+IV LP +I+ L+ + +
Sbjct: 209 RNRNAAADAAQ-----PTLH----------LQRDFAIEPVIVNPKAALPPVIENLVGAVL 253
Query: 264 DGLERGLTPF 273
G+E+G P
Sbjct: 254 AGMEKGNAPI 263
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 7/83 (8%)
Query: 248 NFKLPLMIKRLISSTV----DGLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLP 303
+++P +R++ T G++ GL FD+G I+CR+TL ESVIE+I+RE +D V
Sbjct: 483 GWEMPAKCERVLRVTTMLLKKGVDSGLAAFDMGSILCRETLTKESVIEEIIREVEDDV-- 540
Query: 304 GTSEDGFLESVASIMDRHLDDLT 326
E FL+SV+ MDR L +L+
Sbjct: 541 -GDEAAFLQSVSQSMDRRLGELS 562
>gi|115465773|ref|NP_001056486.1| Os05g0590100 [Oryza sativa Japonica Group]
gi|49328117|gb|AAT58815.1| putative ubiquitin [Oryza sativa Japonica Group]
gi|113580037|dbj|BAF18400.1| Os05g0590100 [Oryza sativa Japonica Group]
gi|222632751|gb|EEE64883.1| hypothetical protein OsJ_19742 [Oryza sativa Japonica Group]
Length = 586
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 126/250 (50%), Positives = 163/250 (65%), Gaps = 18/250 (7%)
Query: 25 RPEKLSNDSILIFLSVGG-SVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELA 83
RP + +SILI+L+ G S++PMRVM SDSIASVKLR+Q+ GF V+KQKLVF+GRELA
Sbjct: 31 RPPHCAAESILIYLTAPGLSMMPMRVMASDSIASVKLRVQTSKGFVVRKQKLVFDGRELA 90
Query: 84 RSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKG 143
R++SR+ DYG++ GNVLHLV+R+SDL+ ITV TV G F F VE GR VGYVKQQIAK
Sbjct: 91 RNDSRIMDYGVSHGNVLHLVIRISDLRLITVQTVHGNKFRFRVEPGRTVGYVKQQIAKNS 150
Query: 144 REFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVRAKPVQKDFEVSIEA 203
D + L+ GE L+D LI D+C+ + AVIHLLV +SAK+ A+PV +DFEVSI A
Sbjct: 151 TH--DDDHHSLVLQGEVLDDAHLIHDVCRTDGAVIHLLVHRSAKLAARPVDRDFEVSIVA 208
Query: 204 TELNEKGADVVGEHQFETLFMGYQIRERKLLQNDLLLEPLIVESNFKLPLMIKRLISSTV 263
N TL LQ D +EP+IV LP +I+ L+ + +
Sbjct: 209 RNRNAAADAAQ-----PTLH----------LQRDFAIEPVIVNPKAALPPVIENLVGAVL 253
Query: 264 DGLERGLTPF 273
G+E+G P
Sbjct: 254 AGMEKGNAPI 263
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 7/83 (8%)
Query: 248 NFKLPLMIKRLISSTV----DGLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLP 303
+++P +R++ T G++ GL FD+G I+CR+TL ESVIE+I+RE +D V
Sbjct: 496 GWEMPAKCERVLRVTTMLLKKGVDSGLAAFDMGSILCRETLTKESVIEEIIREVEDDV-- 553
Query: 304 GTSEDGFLESVASIMDRHLDDLT 326
E FL+SV+ MDR L +L+
Sbjct: 554 -GDEAAFLQSVSQSMDRRLGELS 575
>gi|357142717|ref|XP_003572668.1| PREDICTED: probable phosphatidylinositol 4-kinase type 2-beta
At1g26270-like [Brachypodium distachyon]
Length = 563
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 133/279 (47%), Positives = 183/279 (65%), Gaps = 26/279 (9%)
Query: 1 MSMACVA-LSPVLEESLNFPGNFTHRPEKLSNDSILIFLSVGGSV-IPMRVMESDSIASV 58
MS A VA LSP+L++ L + N HR E L DSILIFL++ G+ +PMRV+ S+SIASV
Sbjct: 1 MSAAGVATLSPLLDQ-LAYVPNCLHRLEPL--DSILIFLAMPGTPPMPMRVLRSESIASV 57
Query: 59 KLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVC 118
KLRIQ NGF V KQ+LVF G EL+ +NS VRD GLADGNVLHLVLRL+DL++IT+ T
Sbjct: 58 KLRIQRSNGFVVTKQRLVFSGHELSCNNSHVRDCGLADGNVLHLVLRLADLRSITIKTAS 117
Query: 119 GKVFEFHVERGRNVGYVKQQIAKK-GREFVDLKNQELICDGEELEDQRLITDICKRNEAV 177
GK F++ + G NVGY+K+++A + G + L++Q L+CDGEELED +LITDIC++ AV
Sbjct: 118 GKKFKYQMASGSNVGYLKKKLAAETGEQLERLEDQRLVCDGEELEDNQLITDICRKGAAV 177
Query: 178 IHLLVRKSAKVRAKPVQKDFEVSIEATELNEKGADVVGEHQFETLFMGYQIRERKLLQN- 236
IHL +R AKV+ + + KD V++ +N +G+D +QI L +
Sbjct: 178 IHLFIRTPAKVKTQQIDKDTVVTV----VNPEGSD------------NFQIDALDLTKPA 221
Query: 237 ---DLLLEPLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
+EP+IV +L + ++ISST GL+ G P
Sbjct: 222 SGVHPPVEPIIVNRKVELSPAVMKMISSTRAGLDNGFLP 260
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 49/61 (80%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHLDD 324
G ERGL P+D+G I+CRKT ES IE I+ EA+DAVLP TSE+ FLE+V+ IMDRHLD+
Sbjct: 497 GAERGLAPYDVGSILCRKTANKESEIEGIINEAEDAVLPETSEEMFLEAVSEIMDRHLDN 556
Query: 325 L 325
+
Sbjct: 557 M 557
>gi|224127939|ref|XP_002320201.1| predicted protein [Populus trichocarpa]
gi|222860974|gb|EEE98516.1| predicted protein [Populus trichocarpa]
Length = 158
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 114/158 (72%), Positives = 129/158 (81%), Gaps = 4/158 (2%)
Query: 32 DSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRD 91
+SILI+LSV GSV+PMRV++SDSI SVKLRIQSY GF VK QKLV GRELARSNS VRD
Sbjct: 1 ESILIYLSVSGSVMPMRVLKSDSIESVKLRIQSYKGFVVKNQKLVCGGRELARSNSLVRD 60
Query: 92 YGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKN 151
YG+ DGNVLHLVLRLSDLQ I V T GK F+VERGR+VGYVKQQIAKK +EF DL
Sbjct: 61 YGVTDGNVLHLVLRLSDLQVINVRTTSGKQLTFYVERGRDVGYVKQQIAKKEKEFDDLDE 120
Query: 152 QELICDGEELEDQRLITDICK----RNEAVIHLLVRKS 185
QE++C+GE LEDQRLI D+C+ N+A IHLLVRKS
Sbjct: 121 QEVVCEGEPLEDQRLIDDVCRYNNNNNDAAIHLLVRKS 158
>gi|125553532|gb|EAY99241.1| hypothetical protein OsI_21203 [Oryza sativa Indica Group]
Length = 581
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/250 (50%), Positives = 163/250 (65%), Gaps = 18/250 (7%)
Query: 25 RPEKLSNDSILIFLSVGG-SVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELA 83
RP + +SILI+L+ G S++PMRVM SDSIASVKLR+Q+ GF V+KQKLVF+GRELA
Sbjct: 31 RPPHCAAESILIYLTAPGLSMMPMRVMASDSIASVKLRVQTSKGFVVRKQKLVFDGRELA 90
Query: 84 RSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKG 143
R++SR+ DYG++ GNVLHLV+R+SDL+ ITV TV G F F VE GR VGYVKQQIAK
Sbjct: 91 RNDSRIMDYGVSHGNVLHLVIRISDLRLITVQTVHGNKFRFRVEPGRTVGYVKQQIAKNS 150
Query: 144 REFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVRAKPVQKDFEVSIEA 203
D + L+ GE L+D LI D+C+ + AVIHLLV +SAK+ A+PV +DFEVSI A
Sbjct: 151 TH--DDDHHSLVLLGEVLDDAHLIHDVCRTDGAVIHLLVHRSAKLAARPVDRDFEVSIVA 208
Query: 204 TELNEKGADVVGEHQFETLFMGYQIRERKLLQNDLLLEPLIVESNFKLPLMIKRLISSTV 263
N TL LQ D +EP+IV LP +I+ L+ + +
Sbjct: 209 RNRNAAADAAQ-----PTLH----------LQRDFAIEPVIVNPKAALPPVIENLVGAVL 253
Query: 264 DGLERGLTPF 273
G+E+G P
Sbjct: 254 AGMEKGNAPI 263
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 7/83 (8%)
Query: 248 NFKLPLMIKRLISSTV----DGLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLP 303
+++P +R++ T G++ GL FD+G I+CR+TL ESVIE+I+RE +D V
Sbjct: 496 GWEMPAKCERVLRVTTMLLKKGVDSGLAAFDMGSILCRETLTKESVIEEIIREVEDDV-- 553
Query: 304 GTSEDGFLESVASIMDRHLDDLT 326
E FL+SV+ MDR L +L+
Sbjct: 554 -GDEAAFLQSVSQSMDRRLGELS 575
>gi|356504169|ref|XP_003520871.1| PREDICTED: uncharacterized protein LOC100817301 [Glycine max]
Length = 601
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 136/292 (46%), Positives = 186/292 (63%), Gaps = 24/292 (8%)
Query: 1 MSMACVA-LSPVLEESLNFPGNFTHR-PEKLS--NDSILIFLSVGGSVIPMRVMESDSIA 56
MS A V+ L+ V E L P F P LS + SI I+LS GS+ P+RVME D+I
Sbjct: 1 MSSAGVSTLTVVPTEPLLSPKAFPFPIPSHLSLEDKSIFIYLSFSGSLTPIRVMEWDTIE 60
Query: 57 SVKLRIQSYNG--FFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITV 114
SVK +IQ F KQKLV+ GRELARS++ ++DYG+ DGNVLHLV++LSDLQ I V
Sbjct: 61 SVKFKIQRCESLPFLTNKQKLVYAGRELARSDTPLKDYGVTDGNVLHLVIKLSDLQVINV 120
Query: 115 TTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDI-CKR 173
T CGK F F VERGR+VGY+KQ+IA++ ++F D + QEL+C+GE LEDQRLI DI CK
Sbjct: 121 KTSCGKEFTFQVERGRDVGYIKQRIARREKQFDDPEEQELVCNGERLEDQRLIDDICCKH 180
Query: 174 NEAVIHLLVRKS-AKVRAKPVQKDFEVSIEATEL-NEKGADVVGEHQFETLFMGYQ--IR 229
N+A +HL VRK KV+ +P+ E+SI A +L ++K DV G + +G + IR
Sbjct: 181 NDAAVHLFVRKKHVKVQRRPL----ELSIVAKDLIDKKKNDVNGNTNRRSYDVGKEDTIR 236
Query: 230 ERKLLQ---------NDLLLEPLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
+ ++Q D +LEP+I+ +L I+ +++ST +GL G P
Sbjct: 237 KSDVIQRAVPRKPPGRDFILEPVIINHKIELAPAIRNMVNSTYEGLGSGKCP 288
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 50/61 (81%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHLDD 324
G+ERGLTPF IG +MCR++L ESVIE++V+ A D+VLPGTSE L+SV+ I+D HLD+
Sbjct: 536 GVERGLTPFAIGSLMCRESLNKESVIEEVVQAALDSVLPGTSEATLLDSVSQILDLHLDE 595
Query: 325 L 325
+
Sbjct: 596 I 596
>gi|297836923|ref|XP_002886343.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332184|gb|EFH62602.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 558
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 124/273 (45%), Positives = 172/273 (63%), Gaps = 29/273 (10%)
Query: 1 MSMACVALSPVLEESLNFPGNFTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVKL 60
MS+A VALSP+ S F S S+L+FL+V GS +PM ++ESDSIA VKL
Sbjct: 1 MSVADVALSPIHRGS-GFAFGGYQESTHFSVKSVLVFLTVSGSTMPMLILESDSIAEVKL 59
Query: 61 RIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGK 120
RIQ+ NGF V++QKLVF GRELAR+ SRV+DYG+ G+VLHLVL+L D +TV T CGK
Sbjct: 60 RIQTCNGFRVRRQKLVFSGRELARNASRVKDYGVTGGSVLHLVLKLYDPLLVTVITTCGK 119
Query: 121 VFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHL 180
VF+F+V+R RNVGY+K++I+K+G+ F ++ +QE++ GE+L+D R+I ICK +VIHL
Sbjct: 120 VFQFNVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGICKEGNSVIHL 179
Query: 181 LVRKSAKVRAKPVQKDFEVSIEATELNEKGADVVGEHQFETLFMGYQIRERKLLQN-DLL 239
LV+KS + EA+ L D + RE + D L
Sbjct: 180 LVKKSVE--------------EASYLPALVDDTLK-------------REEDVASGKDFL 212
Query: 240 LEPLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
LEP+++ KLP +++ +I TVDGL +G P
Sbjct: 213 LEPVVLNPAVKLPEVLEDMIDRTVDGLNKGNPP 245
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 49/62 (79%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHLDD 324
G+ER LTP+ IG IMCR+T+ +S IE+IVREA ++VLP +SE FLE+V+ MDR LD+
Sbjct: 496 GVERNLTPYQIGSIMCRETVNKDSAIEEIVREAHNSVLPASSEATFLEAVSVAMDRRLDE 555
Query: 325 LT 326
LT
Sbjct: 556 LT 557
>gi|356560179|ref|XP_003548372.1| PREDICTED: uncharacterized protein LOC100815111 [Glycine max]
Length = 590
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 140/288 (48%), Positives = 176/288 (61%), Gaps = 21/288 (7%)
Query: 2 SMACVALSPVLEESLNFP-GNFTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVKL 60
S LSPV E L P G +T L + I I+LS GS+ PMRV+ D+I SVKL
Sbjct: 3 SAGVTTLSPVPRELLLSPDGYYTPLHLSLDQEFIFIYLSYYGSLTPMRVLPCDTIESVKL 62
Query: 61 RIQSYNGF--FVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVC 118
+IQ G KQKLV +GRELARSNS +++YG+ +GNVLHLV+RLSDLQ I+V T
Sbjct: 63 KIQKSEGLPSLTNKQKLVCDGRELARSNSLLKEYGVTEGNVLHLVIRLSDLQTISVRTSS 122
Query: 119 GKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC-KRNEAV 177
GK F F VER R+VGYVKQQIAKK + F D + QE++C+GE LEDQ LI IC K N+AV
Sbjct: 123 GKDFTFQVERCRDVGYVKQQIAKKEKRFADPEQQEVVCNGELLEDQTLIDGICSKYNDAV 182
Query: 178 IHLLVR-KSAKVR---------AKPVQ--KDFEVSIEATELN-EKGADVVGEHQFETLFM 224
IHL VR K A+VR AK ++ KD++VS E N K DV E +
Sbjct: 183 IHLFVRVKYAEVRTGQDELSVVAKELKDTKDYDVS----ETNCRKKYDVSKEDTGREYGV 238
Query: 225 GYQIRERKLLQNDLLLEPLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
I RK + DLLLEP+IV +L + +I+ST +GL+ G P
Sbjct: 239 VEPIVPRKAIDRDLLLEPVIVNKKIELASEVWNMINSTYEGLDSGNYP 286
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 56/79 (70%), Gaps = 4/79 (5%)
Query: 249 FKLPLMIKRLISSTV----DGLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPG 304
+ LP+ R + + G+ERG+TPF IG +MCR++L ESVIE IV+ A D+VLPG
Sbjct: 512 WNLPVECARTLQISTMLLKKGVERGMTPFAIGSLMCRESLNKESVIEGIVKAALDSVLPG 571
Query: 305 TSEDGFLESVASIMDRHLD 323
TSE FL++V+ IMD+HLD
Sbjct: 572 TSEATFLDAVSEIMDQHLD 590
>gi|356522506|ref|XP_003529887.1| PREDICTED: uncharacterized protein LOC100792568 [Glycine max]
Length = 594
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 137/285 (48%), Positives = 175/285 (61%), Gaps = 18/285 (6%)
Query: 2 SMACVALSPVLEESLNFP-GNFTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVKL 60
S LSPV E L P G +T L + I I+LS GS+ PMRV+ D+I SVKL
Sbjct: 3 SAGVTTLSPVPRELLLSPDGYYTPLHLSLDREFIFIYLSYFGSLTPMRVLPCDTIESVKL 62
Query: 61 RIQSYNGF--FVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVC 118
+IQ G KQKLV +GRELARSNS +++YG+ +GNVLHLV+RLSDLQ I+V T
Sbjct: 63 KIQKSEGLPSLTNKQKLVCDGRELARSNSLLKEYGVTEGNVLHLVIRLSDLQTISVRTSS 122
Query: 119 GKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC-KRNEAV 177
GK F F VER R+VGY+KQQI KK + F D + QE++C+G+ LEDQ LI DIC K N+AV
Sbjct: 123 GKDFTFQVERCRDVGYIKQQIGKKEKCFADPEQQEVMCNGKLLEDQMLIDDICSKYNDAV 182
Query: 178 IHLLVR-KSAKVRAKPVQKDFEVSIEATELNE---------KGADVVGEHQFETLFMGYQ 227
IHL VR K A+VR +D E+S+ A ELN+ + D+ E +
Sbjct: 183 IHLFVRVKYAEVRTG---QD-ELSVVAKELNDTKDYETNCRRKYDISKEDTRREYGVVEP 238
Query: 228 IRERKLLQNDLLLEPLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
I RK L DLLLEP+IV +L I +I+ST +GL+ G P
Sbjct: 239 IMPRKALDRDLLLEPVIVNKKIELASEIWNMINSTYEGLDIGNYP 283
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 58/82 (70%), Gaps = 4/82 (4%)
Query: 249 FKLPLMIKRLISSTV----DGLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPG 304
+ LP+ R + + G++RG+TPF IG +MCR++L ESVIE IV+ A D+VLP
Sbjct: 509 WNLPVECARTLQISTMLLKKGVKRGMTPFAIGSLMCRESLNKESVIEGIVKAALDSVLPC 568
Query: 305 TSEDGFLESVASIMDRHLDDLT 326
TSE FL++V+ IMD+HLD++T
Sbjct: 569 TSEATFLDTVSEIMDQHLDEIT 590
>gi|125555209|gb|EAZ00815.1| hypothetical protein OsI_22845 [Oryza sativa Indica Group]
Length = 568
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 129/280 (46%), Positives = 178/280 (63%), Gaps = 20/280 (7%)
Query: 1 MSMACVALSPVLEESLNFPGNF--THRPEKLSN----DSILIFLSV-GGSVIPMRVMESD 53
MS A +A+SP++EE P F + P LS DSI+IFL+V G +PM V+ S+
Sbjct: 1 MSSAAIAISPMVEEFALLPICFDGSRSPHCLSGSQLQDSIIIFLAVPGAPPMPMSVLGSE 60
Query: 54 SIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAIT 113
SIASVKLRIQ + GF V KQ+LV +G ELAR+N V+DYGLADGNVLHLV+RL+DL+ I
Sbjct: 61 SIASVKLRIQRFKGFVVNKQRLVLDGHELARNNCHVKDYGLADGNVLHLVIRLADLRLIN 120
Query: 114 VTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDL-KNQELICDGEELEDQRLITDICK 172
+ T GK F+F V++ RNV Y+K ++A +G E DL ++ +L CDG+ELED +LI DI K
Sbjct: 121 IETTSGKKFQFQVDQSRNVKYLKSKLAVEGDE--DLGEDHKLECDGKELEDHQLIADISK 178
Query: 173 RNEAVIHLLVRKSAKVRAKPVQKDFEVSIEATELNEKGADVVGEHQFETLFMGYQIRERK 232
+++AVIHL +RK AK+R + V KD V++ + E +++ + R
Sbjct: 179 KDDAVIHLFIRKPAKLRTQQVDKDTVVTVVTPQEKEN-----LQNEAHAVNPAKPAGARP 233
Query: 233 LLQNDLLLEPLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
L+EP+IV KL L + R+ISS + GLE G P
Sbjct: 234 -----ALVEPIIVNHKVKLSLEVMRMISSAIAGLENGYLP 268
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 47/59 (79%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHLD 323
G RGLTP+DIG I+CR+T+ +S IE IV+EA+ VLPG+SE FLE+V+ I+DRHLD
Sbjct: 506 GAARGLTPYDIGRILCRETVNRDSEIEDIVQEAEGHVLPGSSEVIFLETVSEIIDRHLD 564
>gi|54290883|dbj|BAD61543.1| putative ubiquitin [Oryza sativa Japonica Group]
gi|54291083|dbj|BAD61759.1| putative ubiquitin [Oryza sativa Japonica Group]
gi|125597114|gb|EAZ36894.1| hypothetical protein OsJ_21238 [Oryza sativa Japonica Group]
gi|215694407|dbj|BAG89400.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 568
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 129/280 (46%), Positives = 178/280 (63%), Gaps = 20/280 (7%)
Query: 1 MSMACVALSPVLEESLNFPGNF--THRPEKLSN----DSILIFLSV-GGSVIPMRVMESD 53
MS A +A+SP++EE P F + P LS DSI+IFL+V G +PM V+ S+
Sbjct: 1 MSSAAIAISPMVEEFALLPICFDGSRSPHCLSGSQLQDSIIIFLAVPGAPPMPMSVLGSE 60
Query: 54 SIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAIT 113
SIASVKLRIQ + GF V KQ+LV +G ELAR+N V+DYGLADGNVLHLV+RL+DL+ I
Sbjct: 61 SIASVKLRIQRFKGFVVNKQRLVLDGHELARNNCHVKDYGLADGNVLHLVIRLADLRLIN 120
Query: 114 VTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDL-KNQELICDGEELEDQRLITDICK 172
+ T GK F+F V++ RNV Y+K ++A +G E DL ++ +L CDG+ELED +LI DI K
Sbjct: 121 IETTSGKKFQFQVDQSRNVKYLKSKLAVEGDE--DLGEDHKLECDGKELEDHQLIADISK 178
Query: 173 RNEAVIHLLVRKSAKVRAKPVQKDFEVSIEATELNEKGADVVGEHQFETLFMGYQIRERK 232
+++AVIHL +RK AK+R + V KD V++ + E +++ + R
Sbjct: 179 KDDAVIHLFIRKPAKLRTQQVDKDTVVTVVTPQEKEN-----LQNEAHAVNPAKPAGARP 233
Query: 233 LLQNDLLLEPLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
L+EP+IV KL L + R+ISS + GLE G P
Sbjct: 234 -----ALVEPIIVNHKVKLSLEVMRMISSAIAGLENGYLP 268
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 47/59 (79%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHLD 323
G RGLTP+DIG I+CR+T+ +S IE IV+EA+ VLPG+SE FLE+V+ I+DRHLD
Sbjct: 506 GAARGLTPYDIGRILCRETVNRDSEIEDIVQEAEGHVLPGSSEVIFLETVSEIIDRHLD 564
>gi|358349317|ref|XP_003638685.1| Ubiquitin [Medicago truncatula]
gi|355504620|gb|AES85823.1| Ubiquitin [Medicago truncatula]
Length = 596
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 134/291 (46%), Positives = 181/291 (62%), Gaps = 26/291 (8%)
Query: 1 MSMACVA-LSPVLEESLNFPGNFTHRPEKLS---NDSILIFLSVGGSVIPMRVMESDSIA 56
MS A V LSPV E L P N P LS +D I ++LS GS+ PMRV+ SD+I
Sbjct: 1 MSSAGVTILSPVSREKLLSPTNGLCNPLHLSSNLHDFIFVYLSYSGSLSPMRVLPSDTIE 60
Query: 57 SVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTT 116
SVKL+IQ G KQKLV GREL+RSNS ++DYG+ +GNVLHLV+RL+DLQ I+V T
Sbjct: 61 SVKLKIQRNEGV-TNKQKLVCNGRELSRSNSLLKDYGVTEGNVLHLVIRLADLQTISVRT 119
Query: 117 VCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKR-NE 175
GK + F VER ++V YVK+QIA+K +EF D + QE++C+GE L+DQ+LI DIC N+
Sbjct: 120 CSGKEYSFQVERCKDVWYVKKQIAEKEKEFADPEQQEVVCNGELLDDQKLIDDICSNYND 179
Query: 176 AVIHLLVRKSAKVRAKPVQKDFEVSIEATELNE------KGADVVGEH--------QFET 221
AVIHL VR + + E+SIEA ELN+ K AD V ++ ++E
Sbjct: 180 AVIHLFVRTKYADVSTGLD---ELSIEAKELNDSKNSDAKEADYVRKYDSEEDARKEYEA 236
Query: 222 LFMGYQIRERKLLQNDLLLEPLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
+ +I RK L+LEP+IV +L + +I++T DGL+ G +P
Sbjct: 237 I---ERIMSRKAPGGGLVLEPVIVNPKVELASEVWDMINTTYDGLDSGNSP 284
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 59/82 (71%), Gaps = 4/82 (4%)
Query: 249 FKLPLMIKRLIS-STV---DGLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPG 304
+ LPL R + ST+ G+ +G+TPF IG +MCR++L ESVIE I + A D+VLPG
Sbjct: 510 WDLPLECARTLRISTMLLKKGVGKGMTPFAIGSLMCRESLNKESVIEGIFKAALDSVLPG 569
Query: 305 TSEDGFLESVASIMDRHLDDLT 326
TSE F+++V+ IMD+HLD++T
Sbjct: 570 TSEATFMDAVSEIMDQHLDEIT 591
>gi|357481379|ref|XP_003610975.1| Phosphatidylinositol 4-kinase type 2-beta [Medicago truncatula]
gi|355512310|gb|AES93933.1| Phosphatidylinositol 4-kinase type 2-beta [Medicago truncatula]
Length = 725
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/275 (45%), Positives = 179/275 (65%), Gaps = 10/275 (3%)
Query: 1 MSMACVALSPVLEESLNFPGNFTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVKL 60
MS+A VAL P+L+ES + HR + S++SILI+++V G+V PMRV+ESDSIASVK+
Sbjct: 1 MSVADVALRPILKESEK-NSHCHHR--RSSSESILIYVTVDGAVTPMRVLESDSIASVKM 57
Query: 61 RIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGK 120
RIQ+ KKQ LV GREL+R+N+ +++YG+ GNV+HLVLRLSD+ I V T+CGK
Sbjct: 58 RIQTRKNVSWKKQNLVSNGRELSRNNAEMKEYGVTTGNVVHLVLRLSDMIFIVVRTMCGK 117
Query: 121 VFEFHVERGRNVGYVKQQIAKKGREFVDL--KNQELICDGEELEDQRLITDICKRNEAVI 178
FEF ++R RNV +++ I +KG+ FVDL + QE C GE+L+D+R+ DICK ++ VI
Sbjct: 118 EFEFQIDRHRNVAHLRNCIKRKGKGFVDLVEEEQEFFCSGEKLDDKRIFDDICKNDDDVI 177
Query: 179 HLLVRKSAKVRAKPVQ-KDFEVSIEATELNEKGADVVGEHQFETLFMGYQIRERKLLQND 237
HL+V+KSAKV A V KD EVS+ A LN + + + ++ E+ D
Sbjct: 178 HLIVKKSAKVNATFVHNKDLEVSVVADNLNSNSNQNLNNQNQDEVV---KVIEQP-YGFD 233
Query: 238 LLLEPLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
LLEP+ V + +I +T +GL++G P
Sbjct: 234 FLLEPIFVNPRINYFPFLWDMIDATFNGLKKGNKP 268
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 45/60 (75%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHLDD 324
G+ERGLTP+ IG IMCR+ L ESVIE+IV EAQ ++LPGT E FLE V+ IMD L +
Sbjct: 520 GVERGLTPYAIGSIMCRENLNKESVIEEIVSEAQKSLLPGTEESVFLEFVSQIMDSRLGE 579
>gi|15217656|ref|NP_176628.1| ubiquitin-like protein [Arabidopsis thaliana]
gi|45773788|gb|AAS76698.1| At1g64470 [Arabidopsis thaliana]
gi|46359843|gb|AAS88785.1| At1g64470 [Arabidopsis thaliana]
gi|332196123|gb|AEE34244.1| ubiquitin-like protein [Arabidopsis thaliana]
Length = 213
Score = 207 bits (526), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 105/186 (56%), Positives = 139/186 (74%), Gaps = 1/186 (0%)
Query: 1 MSMACVALSPVLEESLNFPGNFTHRPE-KLSNDSILIFLSVGGSVIPMRVMESDSIASVK 59
MS+A VALSP+ S G F S S+L+FLSV GS +PM ++ESDSIA VK
Sbjct: 1 MSVADVALSPIHRGSAFAVGGFGQSTTTHYSVKSVLVFLSVSGSTMPMLILESDSIAEVK 60
Query: 60 LRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCG 119
LRIQ+ NGF V++QKLVF GRELAR+ SRV+DYG+ G+VLHLVL+L D +TV T CG
Sbjct: 61 LRIQTCNGFRVRRQKLVFSGRELARNASRVKDYGVTGGSVLHLVLKLYDPLLVTVITTCG 120
Query: 120 KVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIH 179
KVF+FHV+R RNVGY+K++I+K+G+ F ++ +QE++ GE+L+D R+I ICK +VIH
Sbjct: 121 KVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGICKDGNSVIH 180
Query: 180 LLVRKS 185
LLV+KS
Sbjct: 181 LLVKKS 186
>gi|6633833|gb|AAF19692.1|AC009519_26 F1N19.4 [Arabidopsis thaliana]
Length = 505
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 105/186 (56%), Positives = 139/186 (74%), Gaps = 1/186 (0%)
Query: 1 MSMACVALSPVLEESLNFPGNFTHRPE-KLSNDSILIFLSVGGSVIPMRVMESDSIASVK 59
MS+A VALSP+ S G F S S+L+FLSV GS +PM ++ESDSIA VK
Sbjct: 1 MSVADVALSPIHRGSAFAVGGFGQSTTTHYSVKSVLVFLSVSGSTMPMLILESDSIAEVK 60
Query: 60 LRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCG 119
LRIQ+ NGF V++QKLVF GRELAR+ SRV+DYG+ G+VLHLVL+L D +TV T CG
Sbjct: 61 LRIQTCNGFRVRRQKLVFSGRELARNASRVKDYGVTGGSVLHLVLKLYDPLLVTVITTCG 120
Query: 120 KVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIH 179
KVF+FHV+R RNVGY+K++I+K+G+ F ++ +QE++ GE+L+D R+I ICK +VIH
Sbjct: 121 KVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGICKDGNSVIH 180
Query: 180 LLVRKS 185
LLV+KS
Sbjct: 181 LLVKKS 186
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 49/62 (79%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHLDD 324
G+ER LTP+ IG +MCR+T+ +S IE+IVREA ++VLP +SE FLE+V+ MDR LD+
Sbjct: 443 GVERNLTPYQIGSVMCRETVNKDSAIEEIVREAHNSVLPASSEATFLEAVSVAMDRRLDE 502
Query: 325 LT 326
LT
Sbjct: 503 LT 504
>gi|115445623|ref|NP_001046591.1| Os02g0290500 [Oryza sativa Japonica Group]
gi|47847951|dbj|BAD21741.1| phosphatidylinositol 3- and 4-kinase-like [Oryza sativa Japonica
Group]
gi|47847959|dbj|BAD21748.1| phosphatidylinositol 3- and 4-kinase-like [Oryza sativa Japonica
Group]
gi|113536122|dbj|BAF08505.1| Os02g0290500 [Oryza sativa Japonica Group]
gi|125539031|gb|EAY85426.1| hypothetical protein OsI_06809 [Oryza sativa Indica Group]
gi|125581711|gb|EAZ22642.1| hypothetical protein OsJ_06315 [Oryza sativa Japonica Group]
gi|215686745|dbj|BAG89595.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 565
Score = 204 bits (518), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 121/276 (43%), Positives = 172/276 (62%), Gaps = 20/276 (7%)
Query: 1 MSMACVA-LSPVLEESLNFPGNFTHRPEKLSN-DSILIFLSVGG-SVIPMRVMESDSIAS 57
MS A +A LSP+L++ P H +L DSI+IFL++ G + +PMRV+ SDS+AS
Sbjct: 1 MSSAGIATLSPLLDQFCFAP----HGEPRLQQLDSIVIFLAMPGVAPMPMRVLHSDSVAS 56
Query: 58 VKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTV 117
VKLRIQ + GF KQ+LVF G EL+ +NS VRDYGL DGNVLHLV+RL+DL+AI++ T
Sbjct: 57 VKLRIQQFKGFVTTKQRLVFSGHELSLNNSHVRDYGLTDGNVLHLVVRLADLRAISIETA 116
Query: 118 CGKVFEFHVERGRNVGYVKQQI-AKKGREFVDLKNQELICDGEELEDQRLITDICKRNEA 176
GK F+F VE NVGY+K ++ A+ G++ LK+Q L+ DGEELED +LI DI K+ A
Sbjct: 117 NGKKFQFQVESCCNVGYLKDKLSAESGQQLGSLKDQRLVFDGEELEDNQLIADISKKGAA 176
Query: 177 VIHLLVRKSAKVRAKPVQKDFEVSIEATELNEKGADVVGEHQFETLFMGYQIRERKLLQN 236
VIHL +R+ AKV+ + K+ V++ + N+ Q + L + + +
Sbjct: 177 VIHLFIRRPAKVQTQQGDKETVVTVVTPKDND-------NLQTDALNLAKPAKGKP---- 225
Query: 237 DLLLEPLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
+EP+I KL + +I ST+ G+E G P
Sbjct: 226 -APVEPIIANGKVKLSPAVMEMIYSTISGIENGYLP 260
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 51/62 (82%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHLDD 324
G ERGLTP+DIG I+CR+T+K ES IE I+ EA+DA+LPGTSE+ FLE+++ IMD HLD
Sbjct: 498 GAERGLTPYDIGSILCRQTVKKESEIEAIIEEAEDAILPGTSEETFLETISEIMDFHLDK 557
Query: 325 LT 326
L
Sbjct: 558 LA 559
>gi|242093094|ref|XP_002437037.1| hypothetical protein SORBIDRAFT_10g019340 [Sorghum bicolor]
gi|241915260|gb|EER88404.1| hypothetical protein SORBIDRAFT_10g019340 [Sorghum bicolor]
Length = 568
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/279 (45%), Positives = 174/279 (62%), Gaps = 19/279 (6%)
Query: 2 SMACVALSPVLEESLNFPGNFT-HRPEKLSN-----DSILIFLSVGG-SVIPMRVMESDS 54
S + L P+ E+ P +FT R S+ DSILIFL+V G +PM V+ S+S
Sbjct: 3 SAGVIVLGPIPEDPAFLPISFTGSRSPHCSSGSQLQDSILIFLAVPGMPPMPMSVLGSES 62
Query: 55 IASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITV 114
IASVKLRIQ + GF V KQ+LV +G ELAR+N V+DYGLA+GNVLHLV+RLSDL+ I +
Sbjct: 63 IASVKLRIQRFKGFVVTKQRLVLDGHELARNNCPVKDYGLAEGNVLHLVIRLSDLRVINI 122
Query: 115 TTVCGKVFEFHVERGRNVGYVKQQIAKKGREFV-DLKNQELICDGEELEDQRLITDICKR 173
T GK F+F V++ RNV ++K ++A +G E + +L++ +L DGEELED +L+ DI KR
Sbjct: 123 ETATGKKFQFQVDQSRNVKFLKNKLAAEGDEDIGNLEDHKLEYDGEELEDHQLVADISKR 182
Query: 174 NEAVIHLLVRKSAKVRAKPVQKDFEVSIEATELNEKGADVVGEHQFETLFMGYQIRERKL 233
++AVIHL +RK AKVR + V +D V++ EK G Q E M R +
Sbjct: 183 DDAVIHLFIRKPAKVRTQQVDRDTLVTV--INPQEK-----GNLQNEARAMNSA---RSV 232
Query: 234 LQNDLLLEPLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
+EP IV KL + ++I+ST+ GLE+G P
Sbjct: 233 GVRPAPVEP-IVNRKVKLSPEVMKMINSTIAGLEKGHLP 270
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 47/59 (79%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHLD 323
G RGLTP DIG I+CR+T+ S IE I++EA+DAVLPG+SE+ F+E+V+ I+D HLD
Sbjct: 508 GAARGLTPHDIGRILCRETVNRGSEIEDIIQEAEDAVLPGSSENMFVETVSEIIDHHLD 566
>gi|242091567|ref|XP_002441616.1| hypothetical protein SORBIDRAFT_09g030425 [Sorghum bicolor]
gi|241946901|gb|EES20046.1| hypothetical protein SORBIDRAFT_09g030425 [Sorghum bicolor]
Length = 575
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/252 (46%), Positives = 157/252 (62%), Gaps = 35/252 (13%)
Query: 34 ILIFLSVGG-SVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDY 92
I+I+L+ G +V+PMRVM SDSIASVKLR+Q+ G +KQKLVF+GRELAR + R+RDY
Sbjct: 39 IMIYLTAPGLAVMPMRVMASDSIASVKLRVQTSRGVTARKQKLVFDGRELARDDGRIRDY 98
Query: 93 GLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGR----EFVD 148
G+ADGNV+HLV+R+ DL+ ITV TV G F F VE GR VGYVKQQIAK R D
Sbjct: 99 GVADGNVVHLVIRIPDLRLITVETVQGGKFRFRVEPGRTVGYVKQQIAKDRRLHPTTRPD 158
Query: 149 LKNQELICDGEELEDQRLITDICKRNEAVIHLLV-RKSAKVRAKPVQKD-FEVSIEATEL 206
Q L+ +GE+L+D+ LI D+C+ + AVIHLLV R S+K+ A D FEVSI A +
Sbjct: 159 PDEQRLVLEGEDLDDRHLIHDVCRADGAVIHLLVQRSSSKISATEADDDGFEVSIVARDA 218
Query: 207 NEKGADVVGEHQFETLFMGYQIRERKLLQNDLLLEPLIV-----ESNFKLPLMIKRLISS 261
+ +L + D+ +EP++V + KLP ++ +I +
Sbjct: 219 GQ-----------------------QLPRRDVGIEPVVVGDPKAAAQQKLPSAVRDMIDA 255
Query: 262 TVDGLERGLTPF 273
V G+E+G P
Sbjct: 256 AVAGMEKGNAPI 267
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 45/62 (72%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHLDD 324
G+ERGLT F IG ++CR+TL ES IE+IVREA+ A E FL++V+ IMDR LD+
Sbjct: 514 GVERGLTAFHIGSVLCRETLTKESAIEEIVREAEGAGGCDDDETAFLQAVSEIMDRRLDE 573
Query: 325 LT 326
++
Sbjct: 574 IS 575
>gi|326505314|dbj|BAK03044.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 569
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 120/280 (42%), Positives = 170/280 (60%), Gaps = 19/280 (6%)
Query: 2 SMACVALSPVLEESLNFPGNF--THRPEKLSN----DSILIFLSV-GGSVIPMRVMESDS 54
S +AL+P+ +E P +F + S DSILIFL+V G +PM V+ SDS
Sbjct: 3 SAGVIALAPMTDELAFLPISFDGSRSAHCFSGSQLQDSILIFLAVPGAPPMPMSVLGSDS 62
Query: 55 IASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITV 114
IASVKLRIQ + GF V KQ+LV +G ELAR+N V+DYGLADGNVLHLV+RL+DL+ I +
Sbjct: 63 IASVKLRIQRFKGFVVTKQRLVLDGHELARNNCPVKDYGLADGNVLHLVIRLADLRVINI 122
Query: 115 TTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVD--LKNQELICDGEELEDQRLITDICK 172
T GK F+F V++ RNV Y+K ++A +G E +D + +L +GE LED +LI DI
Sbjct: 123 ETASGKKFQFQVDQTRNVKYLKTKLAVEGDEDLDSLQDDDKLEYEGEVLEDHQLIADISN 182
Query: 173 RNEAVIHLLVRKSAKVRAKPVQKDFEVSIEATELNEKGADVVGEHQFETLFMGYQIRERK 232
+++AVIHL +RK AKVR + V KD V+++ + E Q E++ +
Sbjct: 183 KDDAVIHLFIRKPAKVRTQQVDKDTVVTVDNPQKKEN-------LQNESVVVTPAAPAGV 235
Query: 233 LLQNDLLLEPLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
L +EP+++ KL + ++I S + GLE G TP
Sbjct: 236 KLAP---IEPIVINRKVKLSSEVLKMIDSAIAGLENGYTP 272
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 70/116 (60%), Gaps = 13/116 (11%)
Query: 219 FETLFMGYQIRERKLLQNDLLLEPLIVESNFKLPLMIKRLISSTV------------DGL 266
FE L+ Q RER + +E L E + KL +SS+ G
Sbjct: 452 FEWLYWP-QARERFSNETIAYIESLDAEEDIKLLRFHGWELSSSCARVLRISTMLLKKGA 510
Query: 267 ERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHL 322
RGLTP+DIG I+CR+T+ +SVIE I++EA+DAVLPGTSE+ FLE+V+ I+DRHL
Sbjct: 511 ARGLTPYDIGRILCRETVNRDSVIEDIIQEAEDAVLPGTSENLFLETVSEIIDRHL 566
>gi|238007280|gb|ACR34675.1| unknown [Zea mays]
Length = 568
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/279 (43%), Positives = 171/279 (61%), Gaps = 19/279 (6%)
Query: 2 SMACVALSPVLEESLNFPGNFT-HRPEKLSN-----DSILIFLSVGG-SVIPMRVMESDS 54
S + L PV E+ P F R + S+ DSILIFL+V G +PM V+ S+S
Sbjct: 3 SAGVIVLGPVPEDPAFLPICFNGSRSQHCSSGSQLQDSILIFLAVPGMPPMPMSVLGSES 62
Query: 55 IASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITV 114
IASVKLRIQ + GF KQ+LV +G ELAR+NS V+DYGLA+GNVLHLV+RLSDL+ I +
Sbjct: 63 IASVKLRIQQFKGFVATKQRLVLDGHELARNNSPVKDYGLAEGNVLHLVIRLSDLRVINI 122
Query: 115 TTVCGKVFEFHVERGRNVGYVKQQIAKKGREFV-DLKNQELICDGEELEDQRLITDICKR 173
T G+ F+F V++ RNV ++K ++ +G E + +L++ +L DGEELED +LI DI +R
Sbjct: 123 ETATGRKFQFQVDQSRNVKFLKNKLEAEGDEDIGNLEDHKLEYDGEELEDNQLIADISRR 182
Query: 174 NEAVIHLLVRKSAKVRAKPVQKDFEVSIEATELNEKGADVVGEHQFETLFMGYQIRERKL 233
++AVIHL +RK AKV + V D V++ +N +G G Q E G +
Sbjct: 183 DDAVIHLFIRKPAKVWTQQVDGDTLVTV----VNPQGK---GNLQNEA---GSVNSANSV 232
Query: 234 LQNDLLLEPLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
+EP IV KL + ++I+ST+ GLE+G P
Sbjct: 233 GVRPAPVEP-IVNRKAKLSCEVMKMINSTIAGLEKGHLP 270
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 59/79 (74%), Gaps = 4/79 (5%)
Query: 249 FKLPLMIKRLIS-STV---DGLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPG 304
++LP R++ ST+ G RG TP+DIG I+CR+T+ ES IE I++EA+DAVLPG
Sbjct: 488 WELPPRCARVLRISTMLLKKGAARGFTPYDIGRILCRETVNRESEIEDIIQEAEDAVLPG 547
Query: 305 TSEDGFLESVASIMDRHLD 323
+SE+ FLE+V+ IMDRHLD
Sbjct: 548 SSENMFLETVSEIMDRHLD 566
>gi|226506268|ref|NP_001147061.1| phosphatidylinositol 3- and 4-kinase family protein [Zea mays]
gi|195606964|gb|ACG25312.1| phosphatidylinositol 3- and 4-kinase family protein [Zea mays]
Length = 568
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/279 (44%), Positives = 173/279 (62%), Gaps = 19/279 (6%)
Query: 2 SMACVALSPVLEESLNFP--GNFTHRPEKLSN----DSILIFLSVGG-SVIPMRVMESDS 54
S + L PV ++ P N + P S DSILIFL+V G S +PM V+ES+S
Sbjct: 3 SAGVIVLGPVPKDPAFLPICFNGSRSPHCSSGSQLQDSILIFLAVPGMSPMPMSVLESES 62
Query: 55 IASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITV 114
IASVKLRIQ + GF KQ+LV +G ELAR+N V+DYGLA+GNVLHLV+RLSDL+ I +
Sbjct: 63 IASVKLRIQRFKGFVATKQRLVLDGHELARNNCPVKDYGLAEGNVLHLVIRLSDLRVINI 122
Query: 115 TTVCGKVFEFHVERGRNVGYVKQQIAKKGREFV-DLKNQELICDGEELEDQRLITDICKR 173
T GK F+F V++ RNV ++K ++A +G E + +L++ +L DGEELED +LI DI KR
Sbjct: 123 ETATGKKFQFQVDQSRNVKFLKNKLAAEGDEDIGNLQDHKLEYDGEELEDHQLIADISKR 182
Query: 174 NEAVIHLLVRKSAKVRAKPVQKDFEVSIEATELNEKGADVVGEHQFETLFMGYQIRERKL 233
++AVIHL + K AKV + V +D V++ + EKG ++ E + ++R
Sbjct: 183 DDAVIHLFILKPAKVLTQQVDRDTLVTVLNPQ--EKG-NLQNEPRSMNSTKSVEVRPAP- 238
Query: 234 LQNDLLLEPLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
+EP IV N KL + ++I+ T GLE+G P
Sbjct: 239 ------VEP-IVSQNVKLSPELIKMINLTTVGLEKGHLP 270
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 47/58 (81%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHL 322
G RG TP+DIG I+CR+T+ +S IE I++EA+DAVLP +SE+ FLE+++ IMDRHL
Sbjct: 508 GASRGFTPYDIGRILCRETVNRDSEIEVIIQEAEDAVLPWSSENMFLETLSEIMDRHL 565
>gi|242064870|ref|XP_002453724.1| hypothetical protein SORBIDRAFT_04g011290 [Sorghum bicolor]
gi|241933555|gb|EES06700.1| hypothetical protein SORBIDRAFT_04g011290 [Sorghum bicolor]
Length = 562
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/243 (42%), Positives = 151/243 (62%), Gaps = 14/243 (5%)
Query: 32 DSILIFLSVGG-SVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVR 90
DSILIFL++ G +P+RV++S+S+ASVKLRIQ + GF + KQ+L+F G EL+ +NSRVR
Sbjct: 30 DSILIFLAIPGMPPVPIRVLDSESVASVKLRIQRFKGFVITKQRLLFGGHELSHNNSRVR 89
Query: 91 DYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK-GREFVDL 149
DYGLADGNVLHLV+RL++L I + T GK F F VE VGY+K IA + G + L
Sbjct: 90 DYGLADGNVLHLVVRLAELHEIVIETAHGKKFRFQVESAHKVGYLKNMIAAQTGEQLESL 149
Query: 150 KNQELICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVRAKPVQKDFEVSIEATELNEK 209
K+Q+L+ +ELED +LITDI K+ + VIHL + ++AKV+ + K+ V + T +
Sbjct: 150 KDQKLVLGDKELEDHQLITDIAKKGDVVIHLFINQAAKVQTNNIDKETVVKV-VTPKENR 208
Query: 210 GADVVGEHQFETLFMGYQIRERKLLQNDLLLEPLIVESNFKLPLMIKRLISSTVDGLERG 269
+ + +T + +EP++V KL +I +I +T+ GLE G
Sbjct: 209 NLQIDAMNHIDTNSCKHPT-----------VEPIVVNLKVKLSPVIMEMIGTTIAGLENG 257
Query: 270 LTP 272
P
Sbjct: 258 YLP 260
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 47/63 (74%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHLDD 324
G ERGLT +DIG +MCR+ + +S IE ++ EA+D LPGTSE+ FLE+++ IMD +LD
Sbjct: 496 GAERGLTAYDIGNLMCREVVTRKSEIESLMEEAEDYFLPGTSEETFLETLSEIMDGYLDK 555
Query: 325 LTP 327
+ P
Sbjct: 556 VLP 558
>gi|413948666|gb|AFW81315.1| hypothetical protein ZEAMMB73_770891 [Zea mays]
Length = 553
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/186 (52%), Positives = 127/186 (68%), Gaps = 9/186 (4%)
Query: 34 ILIFLSVGG-SVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDY 92
I+I+L+ G +V+PMRVM SDSIASVKLR+Q+ G +KQKLVF GRELAR + R+ DY
Sbjct: 37 IVIYLTAPGLAVLPMRVMASDSIASVKLRVQTSRGVRARKQKLVFGGRELARDDGRILDY 96
Query: 93 GLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQ 152
G+ADGNV+HLV+R+ D++ ITV TV G F F VE GR VGYVKQQIAK Q
Sbjct: 97 GVADGNVVHLVIRVPDVRLITVETVQGGKFRFRVEPGRTVGYVKQQIAKDHPAAARPGEQ 156
Query: 153 ELICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVSIEATE 205
L+ +GE+L+D+ LI D+C+ + AVIHLLVR+S R + P ++D +V IE
Sbjct: 157 RLVLEGEDLDDRHLIHDVCRADGAVIHLLVRRSVVARDAGSGRPSPPPRRD-DVRIEPVG 215
Query: 206 LNEKGA 211
+ K A
Sbjct: 216 GDHKAA 221
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 44/61 (72%), Gaps = 2/61 (3%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHLDD 324
G+ERGLT F IG IMCR+TL ES IE+IVREA A G E FL++V+ IMDR LDD
Sbjct: 489 GVERGLTAFHIGSIMCRETLTKESAIEEIVREA--AERGGGCETVFLQAVSEIMDRRLDD 546
Query: 325 L 325
+
Sbjct: 547 I 547
>gi|359484188|ref|XP_003633075.1| PREDICTED: uncharacterized protein LOC100261694 [Vitis vinifera]
Length = 179
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/151 (54%), Positives = 112/151 (74%), Gaps = 1/151 (0%)
Query: 21 NFTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGR 80
+F +P S+ SILI L+ GS+IPMRVM SI VKLR+Q+ GF VKKQKLV R
Sbjct: 29 HFHSQPGLFSSKSILICLAFSGSMIPMRVMGFISIEVVKLRVQNCRGFVVKKQKLVCGNR 88
Query: 81 ELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIA 140
ELARSNS V+DYG+++GNV H+VL+LS+LQ I V T G+ + FHVER ++VGYVKQQ+A
Sbjct: 89 ELARSNSFVQDYGVSNGNVFHIVLKLSNLQIINVRTAYGEEYTFHVERSKDVGYVKQQVA 148
Query: 141 KKGREFVDLKNQELICDGEELEDQRLITDIC 171
KKG+ VD+++QE++CDG+ + D + + C
Sbjct: 149 KKGKGLVDVEDQEIVCDGKWV-DGKWVCCCC 178
>gi|168026242|ref|XP_001765641.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683067|gb|EDQ69480.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/154 (47%), Positives = 119/154 (77%), Gaps = 2/154 (1%)
Query: 47 MRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRL 106
M+V+ SD+IASVK+RIQ+Y GF+ ++Q+LV+ GREL R++ +RDYG+++G +LHLVL L
Sbjct: 1 MQVLRSDTIASVKMRIQAYKGFYTRQQRLVYGGRELTRNDRLIRDYGVSNGEMLHLVLHL 60
Query: 107 SDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRL 166
S++ +T+ ++ GK + F VER R V +K++I++K E +DL Q+L+ G+ LEDQ+
Sbjct: 61 SNIVDVTIKSIDGKEYVFKVERSRCVRDLKKRISEK--EGLDLDAQQLVLRGQNLEDQKC 118
Query: 167 ITDICKRNEAVIHLLVRKSAKVRAKPVQKDFEVS 200
I ++C +++AV+HL++R+S+KVR K V +D E+S
Sbjct: 119 IDELCLQDDAVVHLILRRSSKVRTKVVGRDVELS 152
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 39/55 (70%)
Query: 269 GLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHLD 323
GLTP++IG +MCR+TL +SV+E+++ E +D + +E FL ++++ MD ++
Sbjct: 470 GLTPYEIGSMMCRETLYKKSVMEEMIEEVEDKLPTSATERDFLNAMSATMDSRIN 524
>gi|125525065|gb|EAY73179.1| hypothetical protein OsI_01051 [Oryza sativa Indica Group]
Length = 567
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 155/282 (54%), Gaps = 34/282 (12%)
Query: 1 MSMACVALSPVLEESLNFP--------GNFTHRPEKLSNDSILIFLSVGG-SVIPMRVME 51
M+ +A+SP ++L+ ++ H PE L++L+V G + M+V+E
Sbjct: 1 MASTGIAVSPSNNDALDLADAQLDGDQSSYHHTPEVF-----LLYLAVPGVPLAKMQVLE 55
Query: 52 SDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQA 111
SDS+A+VKLRIQ+ GF + Q+LVFEGREL+R++S +RDYG+ G+VLHLV+RLSD +
Sbjct: 56 SDSVATVKLRIQNSKGFVARNQRLVFEGRELSRNDSHIRDYGVRYGSVLHLVIRLSDPRR 115
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
V TV G+ F+F V++ RN Y+KQ+I++ + + +GE+L++ LI+ IC
Sbjct: 116 TAVRTVYGRKFKFQVDQCRNARYMKQEISRNFESPNGIGESVTLVNGEKLDESTLISTIC 175
Query: 172 KRNEAVIHLLVRKSAKVRAKPVQKDFE-VSIEATELNEKGADVVGEHQFETLFMGYQIRE 230
+ N + L KS +++ FE +SI +D+ QF+ Y
Sbjct: 176 ETNTSDTDFLANKSENFNGNEIEESFEQLSI--------SSDIGNNLQFDDAKEKYP--- 224
Query: 231 RKLLQNDLLLEPLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
L+EP++V + L I +I +T+ GLE TP
Sbjct: 225 --------LIEPVLVNPSVTLTPKITGMIEATLAGLEMEHTP 258
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 47/61 (77%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHLDD 324
G RGLTP++IG ++CR+ + +S IE+IV EA+D VLPG E F+E+++ IMDRHL++
Sbjct: 505 GAVRGLTPYEIGNMLCRENITTKSKIEEIVEEAEDVVLPGIGEKAFMEAISGIMDRHLNE 564
Query: 325 L 325
L
Sbjct: 565 L 565
>gi|56783948|dbj|BAD81385.1| ubiquitin -like [Oryza sativa Japonica Group]
gi|125569653|gb|EAZ11168.1| hypothetical protein OsJ_01018 [Oryza sativa Japonica Group]
Length = 567
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 155/282 (54%), Gaps = 34/282 (12%)
Query: 1 MSMACVALSPVLEESLNFP--------GNFTHRPEKLSNDSILIFLSVGG-SVIPMRVME 51
M+ +A+SP ++L+ ++ H PE L++L+V G + M+V+E
Sbjct: 1 MASTGIAVSPSNNDALDLAVAQLDGDQSSYHHTPEVF-----LLYLAVPGVPLAKMQVLE 55
Query: 52 SDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQA 111
SDS+A+VKLRIQ+ GF + Q+LVFEGREL+R++S +RDYG+ G+VLHLV+RLSD +
Sbjct: 56 SDSVAAVKLRIQNSKGFVARNQRLVFEGRELSRNDSHIRDYGVRYGSVLHLVIRLSDPRR 115
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
V TV G+ F+F V++ RN Y+KQ+I++ + + +GE+L++ LI+ IC
Sbjct: 116 TAVRTVYGRKFKFQVDQRRNARYMKQEISRNVESPNGIGESMTLVNGEKLDESTLISTIC 175
Query: 172 KRNEAVIHLLVRKSAKVRAKPVQKDFE-VSIEATELNEKGADVVGEHQFETLFMGYQIRE 230
+ N + L KS +++ FE +SI +D+ QF+ Y
Sbjct: 176 ETNTSDTDFLANKSENFNGNEIEESFEQLSI--------SSDIGNNLQFDDAKEKYP--- 224
Query: 231 RKLLQNDLLLEPLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
L+EP++V + L I +I +T+ GLE TP
Sbjct: 225 --------LIEPVLVNPSVTLTPKITGMIEATLAGLEMEHTP 258
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHLDD 324
G RGLTP++IG ++CR+ + +S IE+IV EA+ VLPG E F+E+++ IMDR+L++
Sbjct: 505 GAVRGLTPYEIGNMLCRENITTKSKIEEIVEEAEHVVLPGIGEKAFMEAISGIMDRYLNE 564
Query: 325 L 325
L
Sbjct: 565 L 565
>gi|297719771|ref|NP_001172247.1| Os01g0234850 [Oryza sativa Japonica Group]
gi|255673035|dbj|BAH90977.1| Os01g0234850, partial [Oryza sativa Japonica Group]
Length = 589
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 153/277 (55%), Gaps = 34/277 (12%)
Query: 6 VALSPVLEESLNFP--------GNFTHRPEKLSNDSILIFLSVGG-SVIPMRVMESDSIA 56
+A+SP ++L+ ++ H PE L++L+V G + M+V+ESDS+A
Sbjct: 28 IAVSPSNNDALDLAVAQLDGDQSSYHHTPEVF-----LLYLAVPGVPLAKMQVLESDSVA 82
Query: 57 SVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTT 116
+VKLRIQ+ GF + Q+LVFEGREL+R++S +RDYG+ G+VLHLV+RLSD + V T
Sbjct: 83 AVKLRIQNSKGFVARNQRLVFEGRELSRNDSHIRDYGVRYGSVLHLVIRLSDPRRTAVRT 142
Query: 117 VCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEA 176
V G+ F+F V++ RN Y+KQ+I++ + + +GE+L++ LI+ IC+ N +
Sbjct: 143 VYGRKFKFQVDQRRNARYMKQEISRNVESPNGIGESMTLVNGEKLDESTLISTICETNTS 202
Query: 177 VIHLLVRKSAKVRAKPVQKDFE-VSIEATELNEKGADVVGEHQFETLFMGYQIRERKLLQ 235
L KS +++ FE +SI +D+ QF+ Y
Sbjct: 203 DTDFLANKSENFNGNEIEESFEQLSI--------SSDIGNNLQFDDAKEKYP-------- 246
Query: 236 NDLLLEPLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
L+EP++V + L I +I +T+ GLE TP
Sbjct: 247 ---LIEPVLVNPSVTLTPKITGMIEATLAGLEMEHTP 280
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHLDD 324
G RGLTP++IG ++CR+ + +S IE+IV EA+ VLPG E F+E+++ IMDR+L++
Sbjct: 527 GAVRGLTPYEIGNMLCRENITTKSKIEEIVEEAEHVVLPGIGEKAFMEAISGIMDRYLNE 586
Query: 325 L 325
L
Sbjct: 587 L 587
>gi|168053102|ref|XP_001778977.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669649|gb|EDQ56232.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 552
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 144/245 (58%), Gaps = 16/245 (6%)
Query: 30 SNDSILIFLSVGGS--VIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
S ++I I+L+ GS PM+V SD+I+SVK++IQ+Y GF+ ++Q+LV+ REL R++
Sbjct: 3 SVEAIQIYLATLGSETTTPMQVFRSDTISSVKMKIQAYKGFYTRQQRLVYGVRELTRNDR 62
Query: 88 RVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFV 147
VRDYG+++G LHLVL L D+ +T+ + G + + VER V +K+QI++K E +
Sbjct: 63 LVRDYGVSNGEKLHLVLYLDDIVDVTIKSADGTEYVYKVERSHCVRDLKKQISEK--EGL 120
Query: 148 DLKNQELICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVRAKPVQKDFEVSIEATELN 207
L Q+L+ G+ LEDQ+ I ++C ++AV+HL++R+S+KVR + V KD E+S
Sbjct: 121 ALNAQQLVLRGQNLEDQKCIDELCLEDDAVVHLVLRRSSKVRTRVVGKDVELSY------ 174
Query: 208 EKGADVVGEHQFETLFMGYQIRERKLLQNDLLLEPLIVESNFKLPLMIKRLISSTVDGLE 267
+ Q F + +Q +LEP +++P ++ ++ GL+
Sbjct: 175 -----TIPHRQLSYNFKNGGT-TKNAVQPVYVLEPACGILRYEIPDVLVDILEQAKAGLQ 228
Query: 268 RGLTP 272
G P
Sbjct: 229 GGYAP 233
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Query: 243 LIVESNFKLPLMIKRLIS-STV---DGLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQ 298
L+ + + L + KR+ ST+ G GLTP+ IG +MCR+TL S +E+++ E +
Sbjct: 461 LLQKHGWSLRTLCKRVFRLSTMLLKKGAAAGLTPYHIGSMMCRETLFKMSTMEEMIEEVE 520
Query: 299 DAVLPGTSEDGFLESVASIMDRHLDDL 325
+ P SE FL +++ MD +++L
Sbjct: 521 KNLHPSASECDFLNAMSETMDSRINNL 547
>gi|302783557|ref|XP_002973551.1| hypothetical protein SELMODRAFT_149153 [Selaginella moellendorffii]
gi|300158589|gb|EFJ25211.1| hypothetical protein SELMODRAFT_149153 [Selaginella moellendorffii]
Length = 520
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/167 (44%), Positives = 106/167 (63%), Gaps = 9/167 (5%)
Query: 40 VGGSVIPMRVMESDSIASVKLRIQSYN-GFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
G ++IP+R++ SD+IASVK+RIQS G +VK+QKLV +GRELAR SRV+DYG+ +
Sbjct: 2 AGKALIPLRILTSDTIASVKMRIQSLKRGMYVKQQKLVHDGRELARDTSRVKDYGIRPRD 61
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVER--GRNVGYVKQQIAKKGREFVDLKNQELIC 156
V+HLVLR+SDL + V + G+ + V+R R Q ++ E +Q LI
Sbjct: 62 VIHLVLRVSDLLQVVVKSGGGREYMLKVDRSSSRKPAARSQSLSPSRHE-----DQGLIL 116
Query: 157 DGEELEDQRLITDICKRNEAVIHLLVRKSAKVRAKPV-QKDFEVSIE 202
GE L+D+RLI D ++A +H++ RK+AKVR V EVSIE
Sbjct: 117 RGERLDDKRLIEDFLLEDDAEVHIVARKAAKVRTWHVGGGGTEVSIE 163
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 39/58 (67%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHL 322
G GL FDIG +MCR L +S IE+++ EA+ VLP TS++ F+E++A +MD H
Sbjct: 456 GAAAGLCAFDIGSMMCRDALDSKSAIERMLEEAEGCVLPETSQEAFMEALAQVMDYHF 513
>gi|302787619|ref|XP_002975579.1| hypothetical protein SELMODRAFT_232569 [Selaginella moellendorffii]
gi|300156580|gb|EFJ23208.1| hypothetical protein SELMODRAFT_232569 [Selaginella moellendorffii]
Length = 520
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 101/157 (64%), Gaps = 8/157 (5%)
Query: 40 VGGSVIPMRVMESDSIASVKLRIQSYN-GFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
G ++IP+R++ SD+IASVK+RIQS G +VK+QKLV +GRELAR SRV+DYG+ +
Sbjct: 2 AGKALIPLRILTSDTIASVKMRIQSLKRGMYVKQQKLVHDGRELARDTSRVKDYGIRPRD 61
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVER--GRNVGYVKQQIAKKGREFVDLKNQELIC 156
V+HLVLR+SDL + V + G+ + V+R R Q ++ E +Q LI
Sbjct: 62 VIHLVLRVSDLLQVVVKSGGGREYMLKVDRSSSRKPAARSQSLSTSRHE-----DQGLIL 116
Query: 157 DGEELEDQRLITDICKRNEAVIHLLVRKSAKVRAKPV 193
GE L+D+RLI D ++A +H++ RK+AKVR V
Sbjct: 117 RGERLDDKRLIEDFLLEDDAEVHIVARKAAKVRTWHV 153
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 39/58 (67%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHL 322
G GL FDIG +MCR L +S IE+++ EA+ VLP TS++ F+E++A +MD H
Sbjct: 456 GAAAGLCAFDIGSMMCRDALDSKSAIERMLEEAEGCVLPETSQEAFMEALAQVMDYHF 513
>gi|255559828|ref|XP_002520933.1| inositol or phosphatidylinositol kinase, putative [Ricinus
communis]
gi|223539899|gb|EEF41478.1| inositol or phosphatidylinositol kinase, putative [Ricinus
communis]
Length = 123
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 74/102 (72%), Gaps = 3/102 (2%)
Query: 1 MSMACVALSPVLEESLNFPGNFTHRPEKLS---NDSILIFLSVGGSVIPMRVMESDSIAS 57
MS+ VALSP+ +ES F G + + + + SILI+LS GS+IPMRV+ESDSIAS
Sbjct: 1 MSIVDVALSPIRKESKKFHGYCNNSQQGTTVPEDSSILIYLSDTGSLIPMRVLESDSIAS 60
Query: 58 VKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNV 99
VKLRIQ+ GF VKKQKL F GRELAR+ S V+DYG+ +G +
Sbjct: 61 VKLRIQTCKGFVVKKQKLDFGGRELARNYSLVKDYGVTNGKI 102
>gi|224132802|ref|XP_002321413.1| predicted protein [Populus trichocarpa]
gi|222868409|gb|EEF05540.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 52/62 (83%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHLDD 324
G ERGLTPF IG IMCR+TL+ ESVIE IV+EAQDAVLPG+ E FLE+V+ IMDRHLD
Sbjct: 300 GAERGLTPFAIGSIMCRETLRKESVIELIVQEAQDAVLPGSGEATFLEAVSLIMDRHLDK 359
Query: 325 LT 326
L+
Sbjct: 360 LS 361
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 224 MGYQIRERKLLQNDLLLEPLIVESNFKLPLMIKRLISSTVDGLERGLTP 272
MGY++ ERK L + LLEPLIV S +LPL+I+ L ST +GL+RG P
Sbjct: 1 MGYRVIERKPLLREFLLEPLIVNSKIQLPLVIRELFKSTFNGLDRGNEP 49
>gi|224120788|ref|XP_002318417.1| predicted protein [Populus trichocarpa]
gi|222859090|gb|EEE96637.1| predicted protein [Populus trichocarpa]
Length = 300
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 53/62 (85%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHLDD 324
G+ERGLTPF IG +MCR+T+K ESVIEQIV+EA DAVLPG+SE FLE+V+ IMDR LD
Sbjct: 239 GVERGLTPFAIGSLMCRETVKKESVIEQIVQEAHDAVLPGSSEAAFLEAVSLIMDRRLDK 298
Query: 325 LT 326
L+
Sbjct: 299 LS 300
>gi|224127943|ref|XP_002320202.1| predicted protein [Populus trichocarpa]
gi|222860975|gb|EEE98517.1| predicted protein [Populus trichocarpa]
Length = 326
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 52/62 (83%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHLDD 324
G+ERGLTPF IG IMCR+TLK ES+IE+IV+EAQD+ LP TSE FLE+V+ IMDR LD+
Sbjct: 261 GVERGLTPFAIGSIMCRETLKKESIIEEIVQEAQDSTLPVTSEALFLETVSHIMDRRLDE 320
Query: 325 LT 326
+
Sbjct: 321 IA 322
>gi|326516610|dbj|BAJ92460.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 136
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 70/116 (60%), Gaps = 13/116 (11%)
Query: 219 FETLFMGYQIRERKLLQNDLLLEPLIVESNFKLPLMIKRLISSTV------------DGL 266
FE L+ Q RER + +E L E + KL +SS+ G
Sbjct: 19 FEWLYWP-QARERFSNETIAYIESLDAEEDIKLLRFHGWELSSSCARVLRISTMLLKKGA 77
Query: 267 ERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHL 322
RGLTP+DIG I+CR+T+ +SVIE I++EA+DAVLPGTSE+ FLE+V+ I+DRHL
Sbjct: 78 ARGLTPYDIGRILCRETVNRDSVIEDIIQEAEDAVLPGTSENLFLETVSEIIDRHL 133
>gi|323457057|gb|EGB12923.1| ubiquitin [Aureococcus anophagefferens]
Length = 250
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G +I + V D+IA+VK +I+ G +Q+L+F GR+L + + DY +
Sbjct: 3 IFIKTLTGKIITLDVDPPDTIANVKQKIEDKEGIPPDRQRLIFCGRQLEDGPTLI-DYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE +G VKQ+I K E + Q L
Sbjct: 62 QKQSTLHLVLRLGGPPQIFVKTLTGKTITLDVEPSDTIGNVKQKIQDK--EGIPSDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++ ED R ++D N + +HL++R
Sbjct: 120 IFKGKQFEDGRTLSDCSILNYSTLHLVLR 148
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 82/161 (50%), Gaps = 18/161 (11%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F+G++ + + D + + +
Sbjct: 83 TLTGKTITLDVEPSDTIGNVKQKIQDKEGIPSDQQRLIFKGKQFEDGRT-LSDCSILNYS 141
Query: 99 VLHLVLRL---------------SDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKG 143
LHLVLRL S+L+ I V T+ GK VE +G VKQ+I K
Sbjct: 142 TLHLVLRLLKEPEREPESEPEPESELEQIVVKTLTGKTITLVVEPSDTIGNVKQKIQDK- 200
Query: 144 REFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVRK 184
E + Q LI G++ ED ++D N++ HL++R+
Sbjct: 201 -EGIPPDQQRLIFKGKQFEDGLTLSDCNIPNKSTFHLVLRR 240
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 35 LIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
++ ++ G I + V SD+I +VK +IQ G +Q+L+F+G++ + + D +
Sbjct: 170 IVVKTLTGKTITLVVEPSDTIGNVKQKIQDKEGIPPDQQRLIFKGKQFEDGLT-LSDCNI 228
Query: 95 ADGNVLHLVLR 105
+ + HLVLR
Sbjct: 229 PNKSTFHLVLR 239
>gi|2654141|gb|AAB87694.1| polyubiquitin [Amoeba proteus]
Length = 382
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 83/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V DSI +VK +IQ G +Q+L+F G++L S + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPGDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRS-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE G ++ VKQ+I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPGDSIDNVKQKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRSLSDYNIQKESTLHLVLR 148
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 83/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V DSI +VK +IQ G +Q+L+F G++L S + DY +
Sbjct: 231 IFIKTLTGKTITLEVEPGDSIDNVKEKIQDKEGIPPDQQRLIFAGKQLEDGRS-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE G ++ VKQ+I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPGDSIDNVKQKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRSLSDYNIQKESTLHLVLR 376
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V DSI +VK +IQ G +Q+L+F G++L S + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPGDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRS-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE G ++ VKQ+I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPGDSIDNVKQKIQDK--EGIPPDGQGL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGGSLSDYNIQKESTLHLVLR 224
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V DSI +VK +IQ G +Q+L+F G++L S + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPGDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRS-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|290543384|ref|NP_001166536.1| polyubiquitin-B [Cavia porcellus]
gi|302595872|sp|P0CG54.1|UBB_CAVPO RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|1197093|dbj|BAA11842.1| ubiquitin [Cavia porcellus]
Length = 311
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 85/159 (53%), Gaps = 4/159 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVRAKPV 193
I G++LED R ++D + E+ +HL++R V A P+
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVYASPI 310
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|307108562|gb|EFN56802.1| hypothetical protein CHLNCDRAFT_51574 [Chlorella variabilis]
Length = 979
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 3/148 (2%)
Query: 36 IFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLA 95
++ VGG I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 74 MYKGVGGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQ 132
Query: 96 DGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELI 155
+ LHLVLRL I V T+ GK VE + VK +I K E + Q LI
Sbjct: 133 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDK--EGIPPDQQRLI 190
Query: 156 CDGEELEDQRLITDICKRNEAVIHLLVR 183
G++LED R + D + E+ +HL++R
Sbjct: 191 FAGKQLEDGRTLADYNIQKESTLHLVLR 218
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 753 IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 811
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 812 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDK--EGIPPDQQRL 869
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 870 IFAGKQLEDGRTLADYNIQKESTLHLVLR 898
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 829 IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 887
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 888 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDK--EGIPPDQQRL 945
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 946 IFAGKQLEDGRTLADYNIQKESTLHLVLR 974
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 77/146 (52%), Gaps = 4/146 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 149 IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 207
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 208 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDK--EGIPPDQQRL 265
Query: 155 ICDGEELEDQRLITDICKRNEAVIHL 180
I G++LED R + D + E+ +HL
Sbjct: 266 IFAGKQLEDGRTLADYNIQKESTLHL 291
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 35/183 (19%)
Query: 33 SILIFL-SVGGSVIPMRVMESDSIASVKLRIQ---------------------------- 63
S+ IF+ ++ G I + V SD+I +VK +IQ
Sbjct: 643 SMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEDQTCLPVRIKLVWSLCRWYVLSTLP 702
Query: 64 ---SYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGK 120
+ G +Q+L+F G++L + + DY + + LHLVLRL I V T+ GK
Sbjct: 703 NPAAAAGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 761
Query: 121 VFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHL 180
VE + VK +I K E + Q LI G++LED R + D + E+ +HL
Sbjct: 762 TITLEVESSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 819
Query: 181 LVR 183
++R
Sbjct: 820 VLR 822
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 905 IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 963
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 964 QKESTLHLVLRL 975
>gi|393912430|gb|EJD76734.1| polyubiquitin, variant 2 [Loa loa]
Length = 322
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 87/168 (51%), Gaps = 3/168 (1%)
Query: 16 LNFPGNFTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKL 75
+ F NF++ + + + ++ G I + V SD+I +VK +IQ G +Q+L
Sbjct: 1 MGFGSNFSYLQRSIITNMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 60
Query: 76 VFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYV 135
+F G++L + + DY + + LHLVLRL I V T+ GK VE + V
Sbjct: 61 IFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 119
Query: 136 KQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
K +I K E + Q LI G++LED R ++D + E+ +HL++R
Sbjct: 120 KAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 165
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 172 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 230
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 231 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 288
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 289 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 317
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 248 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 306
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 307 QKESTLHLVLRL 318
>gi|226531187|ref|NP_001142051.1| uncharacterized protein LOC100274207 [Zea mays]
gi|194706926|gb|ACF87547.1| unknown [Zea mays]
Length = 190
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 59/79 (74%), Gaps = 4/79 (5%)
Query: 249 FKLPLMIKRLIS-STV---DGLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPG 304
++LP R++ ST+ G RG TP+DIG I+CR+T+ ES IE I++EA+DAVLPG
Sbjct: 110 WELPPRCARVLRISTMLLKKGAARGFTPYDIGRILCRETVNRESEIEDIIQEAEDAVLPG 169
Query: 305 TSEDGFLESVASIMDRHLD 323
+SE+ FLE+V+ IMDRHLD
Sbjct: 170 SSENMFLETVSEIMDRHLD 188
>gi|312080345|ref|XP_003142560.1| ubiquitin C II [Loa loa]
gi|393912431|gb|EJD76735.1| polyubiquitin [Loa loa]
Length = 398
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 87/168 (51%), Gaps = 3/168 (1%)
Query: 16 LNFPGNFTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKL 75
+ F NF++ + + + ++ G I + V SD+I +VK +IQ G +Q+L
Sbjct: 1 MGFGSNFSYLQRSIITNMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 60
Query: 76 VFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYV 135
+F G++L + + DY + + LHLVLRL I V T+ GK VE + V
Sbjct: 61 IFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 119
Query: 136 KQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
K +I K E + Q LI G++LED R ++D + E+ +HL++R
Sbjct: 120 KAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 165
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 172 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 230
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 231 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 288
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 289 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 317
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 248 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 306
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 307 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 364
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 365 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 393
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 324 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 382
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 383 QKESTLHLVLRL 394
>gi|324525469|gb|ADY48551.1| Polyubiquitin, partial [Ascaris suum]
Length = 263
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 84/155 (54%), Gaps = 4/155 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE V +VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTLTLEVEPSDAVQHVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR 189
I G++LED R ++D + E+ +HL++R VR
Sbjct: 196 IFAGKQLEDDRTLSDYNIQKESTLHLVLRLRGGVR 230
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 3/149 (2%)
Query: 35 LIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
L ++ G I + V SD+I +VK++IQ G +Q+L+F G++L + + DY +
Sbjct: 3 LFVKTLTGKTITLEVEPSDTIENVKVKIQDKEGIPPDQQRLIFAGKQLEDGRT-LLDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|324525461|gb|ADY48550.1| Polyubiquitin, partial [Ascaris suum]
Length = 263
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 84/155 (54%), Gaps = 4/155 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE V +VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTLTLEVEPSDAVQHVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR 189
I G++LED R ++D + E+ +HL++R VR
Sbjct: 196 IFAGKQLEDDRTLSDYNIQKESTLHLVLRLRGGVR 230
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 3/149 (2%)
Query: 35 LIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
L ++ G I + V SD+I +VK++IQ G +Q+L+F G++L + + DY +
Sbjct: 3 LFVKTLTGKTITLEVEPSDTIENVKVKIQDKEGIPPDQQRLIFAGKQLEDGRT-LLDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|222424733|dbj|BAH20320.1| AT2G46500 [Arabidopsis thaliana]
Length = 320
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 50/59 (84%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHLD 323
G+ERGLT F+IG IMCR+TL +S++E++V EAQ+AVLPGTSE FLE+++ +MD HLD
Sbjct: 257 GVERGLTAFEIGTIMCRETLSKKSLVEEMVEEAQEAVLPGTSEAAFLEALSDVMDYHLD 315
>gi|302393786|sp|P22589.2|UBIQP_PHYIN RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|3176|emb|CAA39250.1| ubiquitin [Phytophthora infestans]
gi|348684114|gb|EGZ23929.1| hypothetical protein PHYSODRAFT_284823 [Phytophthora sojae]
Length = 229
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 105/211 (49%), Gaps = 13/211 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VKQ+I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVSIEATELN 207
I G++LED R ++D + E+ +HL++R ++ K + D E S +
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVK 179
Query: 208 EKGADVVG--EHQFETLFMGYQIRERKLLQN 236
+K D G Q +F G Q+ + + L +
Sbjct: 180 QKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 210
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 83/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VKQ+I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|324532777|gb|ADY49258.1| Polyubiquitin, partial [Ascaris suum]
Length = 187
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE V +VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTLTLEVEPSDAVQHVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVRAKP---VQKDFEVSIEATELNEKG 210
I G++LED R ++D + E+ +HL++R VR +D +E+++ +KG
Sbjct: 120 IFAGKQLEDDRTLSDYNIQKESTLHLVLRLRGGVRVSANAFACRDVTPQVESSDSVKKG 178
>gi|301096555|ref|XP_002897374.1| ubiquitin family protein, putative [Phytophthora infestans T30-4]
gi|262107065|gb|EEY65117.1| ubiquitin family protein, putative [Phytophthora infestans T30-4]
gi|348684366|gb|EGZ24181.1| hypothetical protein PHYSODRAFT_353926 [Phytophthora sojae]
Length = 305
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 105/211 (49%), Gaps = 13/211 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VKQ+I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVSIEATELN 207
I G++LED R ++D + E+ +HL++R ++ K + D E S +
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVK 179
Query: 208 EKGADVVG--EHQFETLFMGYQIRERKLLQN 236
+K D G Q +F G Q+ + + L +
Sbjct: 180 QKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 210
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 83/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VKQ+I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|384493519|gb|EIE84010.1| polyubiquitin [Rhizopus delemar RA 99-880]
Length = 305
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 83/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VKQ+I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKQKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 83/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VKQ+I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKQKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|384496533|gb|EIE87024.1| polyubiquitin [Rhizopus delemar RA 99-880]
Length = 229
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 83/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VKQ+I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKQKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 83/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VKQ+I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKQKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|440796241|gb|ELR17350.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
Length = 220
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 82/150 (54%), Gaps = 4/150 (2%)
Query: 35 LIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYG 93
LIF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY
Sbjct: 69 LIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYN 127
Query: 94 LADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQE 153
+ + LHLVLRL I V T+ GK VE + VKQ+I K E + Q
Sbjct: 128 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDK--EGIPPDQQR 185
Query: 154 LICDGEELEDQRLITDICKRNEAVIHLLVR 183
LI G++LED R + D + E+ +HL++R
Sbjct: 186 LIFAGKQLEDGRTLADYNIQKESTLHLVLR 215
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 77/149 (51%), Gaps = 13/149 (8%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHL+ V T+ GK VE + VKQ+I K E + Q L
Sbjct: 62 QKESTLHLIF---------VKTLTGKTITLEVESSDTIENVKQKIQDK--EGIPPDQQRL 110
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 111 IFAGKQLEDGRTLADYNIQKESTLHLVLR 139
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 146 IFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 204
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 205 QKESTLHLVLRL 216
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 2/123 (1%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VKQ+I K E + Q LI G++LED R + D
Sbjct: 3 IFVKTLTGKTITLEVESSDTIENVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 172 KRNEAVIHLLVRKSAKVRAKPVQKDFEVSIEATELNEKGADVVGEHQFETLFMGYQIRER 231
+ E+ +HL+ K+ + ++ + +IE + + + + Q +F G Q+ +
Sbjct: 61 IQKESTLHLIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDG 120
Query: 232 KLL 234
+ L
Sbjct: 121 RTL 123
>gi|326427340|gb|EGD72910.1| ubiquitin [Salpingoeca sp. ATCC 50818]
Length = 220
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 83/150 (55%), Gaps = 4/150 (2%)
Query: 35 LIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYG 93
LIF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY
Sbjct: 69 LIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYN 127
Query: 94 LADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQE 153
+ + LHLVLRL I V T+ GK VE ++ VK +I K E + Q
Sbjct: 128 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDK--EGIPPDQQR 185
Query: 154 LICDGEELEDQRLITDICKRNEAVIHLLVR 183
LI G++LED R ++D + E+ +HL++R
Sbjct: 186 LIFAGKQLEDGRTLSDYNIQKESTLHLVLR 215
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 78/149 (52%), Gaps = 13/149 (8%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHL+ V T+ GK VE ++ VK +I K E + Q L
Sbjct: 62 QKESTLHLIF---------VKTLTGKTITLEVEPSDSIENVKAKIQDK--EGIPPDQQRL 110
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 111 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 139
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 146 IFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 204
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 205 QKESTLHLVLRL 216
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE ++ VK +I K E + Q LI G++LED R ++D
Sbjct: 3 IFVKTLTGKTITLEVEPSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 172 KRNEAVIHLLVRKSAKVRAKPVQKDFEVSIEATELNEKGADVVGEHQFETLFMGYQIRER 231
+ E+ +HL+ K+ + ++ + SIE + + + + Q +F G Q+ +
Sbjct: 61 IQKESTLHLIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 120
Query: 232 KLLQN 236
+ L +
Sbjct: 121 RTLSD 125
>gi|56684130|gb|AAW22168.1| polyubiquitin [Monocercomonoides sp. PA203]
Length = 229
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D+I SVK +IQ G +Q+L+F G++L + ++DY +
Sbjct: 3 IFVKTLTGKTITLEVENADTIESVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LQDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
LHLVLRL I V T+ GK VE + VKQ+I K E + Q L
Sbjct: 62 QKEATLHLVLRLRGGMQIFVKTLTGKTITLEVENADTIESVKQKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + EA +HL++R
Sbjct: 120 IFAGKQLEDGRTLQDYNIQKEATLHLVLR 148
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D+I SVK +IQ G +Q+L+F G++L + ++DY +
Sbjct: 79 IFVKTLTGKTITLEVENADTIESVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LQDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
LHLVLRL I V T+ GK VE + VKQ+I K E + Q L
Sbjct: 138 QKEATLHLVLRLRGGMQIFVKTLTGKTITLEVENADTIESVKQKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + EA +HL++R
Sbjct: 196 IFAGKQLEDGRTLQDYNIQKEATLHLVLR 224
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D+I SVK +IQ G +Q+L+F G++L + ++DY +
Sbjct: 155 IFVKTLTGKTITLEVENADTIESVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LQDYNI 213
Query: 95 ADGNVLHLVLRL 106
LHLVLRL
Sbjct: 214 QKEATLHLVLRL 225
>gi|255714909|ref|XP_002553736.1| KLTH0E05852p [Lachancea thermotolerans]
gi|238935118|emb|CAR23299.1| KLTH0E05852p [Lachancea thermotolerans CBS 6340]
Length = 409
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 85/155 (54%), Gaps = 4/155 (2%)
Query: 30 SNDSILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSR 88
+ D++ IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L +
Sbjct: 101 ARDTMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT- 159
Query: 89 VRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVD 148
+ DY + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 160 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIP 217
Query: 149 LKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R ++D + E+ +HL++R
Sbjct: 218 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 252
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 259 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 317
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 318 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 375
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 376 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 404
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 335 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 393
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 394 QKESTLHLVLRL 405
>gi|86370988|gb|ABC94632.1| ubiquitin C [Ictalurus punctatus]
Length = 192
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 42 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 100
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE +G VK +I K E + Q L
Sbjct: 101 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIGNVKAKIQDK--EGIPPDQQRL 158
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 159 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
Query: 72 KQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRN 131
+Q+L+F G++L + + DY + + LHLVLRL I V T+ GK VE
Sbjct: 3 QQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 61
Query: 132 VGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
+ VK +I K E + Q LI G++LED R ++D + E+ +HL++R
Sbjct: 62 IENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 111
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 118 IFVKTLTGKTITLEVEPSDTIGNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 176
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 177 QKESTLHLVLRL 188
>gi|223646258|gb|ACN09887.1| Ubiquitin [Salmo salar]
gi|223672105|gb|ACN12234.1| Ubiquitin [Salmo salar]
Length = 191
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 79/146 (54%), Gaps = 3/146 (2%)
Query: 38 LSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADG 97
LS+ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 44 LSLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKE 102
Query: 98 NVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICD 157
+ LHLVLRL I V T+ GK VE + VK +I K E + Q LI
Sbjct: 103 STLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFA 160
Query: 158 GEELEDQRLITDICKRNEAVIHLLVR 183
G++LED R ++D + E+ +HL++R
Sbjct: 161 GKQLEDGRTLSDYNIQKESTLHLVLR 186
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 121 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 179
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 180 TLHLVLRL 187
>gi|114159830|gb|ABI53722.1| polyubiquitin [Pyropia yezoensis]
Length = 533
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VKL+IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKLKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKLKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 518 QKESTLHLVLRL 529
>gi|92790178|emb|CAI83758.1| Polyubiqutin 5 [Polyplastron multivesiculatum]
Length = 220
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 70 IFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 128
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 129 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDK--EGIPPDQQRL 186
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 187 IFAGKQLEDNRTLADYNIQKESTLHLVLR 215
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 3/142 (2%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY + + LH
Sbjct: 1 GKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNIQKESTLH 59
Query: 102 LVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEEL 161
LVLRL I V T+ GK VE + VK +I K E + Q LI G++L
Sbjct: 60 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQL 117
Query: 162 EDQRLITDICKRNEAVIHLLVR 183
ED R + D + E+ +HL++R
Sbjct: 118 EDNRTLADYNIQKESTLHLVLR 139
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 146 IFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 204
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 205 QKESTLHLVLRL 216
>gi|71008515|ref|XP_758220.1| hypothetical protein UM02073.1 [Ustilago maydis 521]
gi|46097838|gb|EAK83071.1| hypothetical protein UM02073.1 [Ustilago maydis 521]
Length = 387
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 89/173 (51%), Gaps = 3/173 (1%)
Query: 11 VLEESLNFPGNFTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFV 70
+ +ES + P + H +L + ++ G I + V SD+I +VK +IQ G
Sbjct: 213 IQKESTHSPCSTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPP 272
Query: 71 KKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGR 130
+Q+L+F G++L + + DY + + LHLVLRL I V T+ GK VE
Sbjct: 273 DQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 331
Query: 131 NVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
+ VK +I K E + Q LI G++LED R ++D + E+ +HL++R
Sbjct: 332 TIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 382
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 313 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 371
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 372 QKESTLHLVLRL 383
>gi|85091236|ref|XP_958803.1| polyubiquitin [Neurospora crassa OR74A]
gi|302595953|sp|P0CG70.1|UBI4P_NEUCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|295930|emb|CAA31530.1| ubiquitin [Neurospora crassa]
gi|28920189|gb|EAA29567.1| polyubiquitin [Neurospora crassa OR74A]
gi|336466506|gb|EGO54671.1| polyubiquitin [Neurospora tetrasperma FGSC 2508]
gi|350286609|gb|EGZ67856.1| polyubiquitin [Neurospora tetrasperma FGSC 2509]
Length = 305
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VKQ+I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VKQ+I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|336271700|ref|XP_003350608.1| hypothetical protein SMAC_07925 [Sordaria macrospora k-hell]
gi|380089527|emb|CCC12626.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 229
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VKQ+I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VKQ+I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|164510092|emb|CAJ32650.1| ubiquitin [Mytilus edulis]
Length = 228
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 83/155 (53%), Gaps = 4/155 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q L+F G++L S + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQSLIFAGKQL-EDGSTLSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRLS I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLSGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQSL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR 189
I G++LED ++D + E+ +HL++R S ++
Sbjct: 120 IFAGKQLEDGSTLSDYNIQKESTLHLVLRLSGGMQ 154
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 82/159 (51%), Gaps = 3/159 (1%)
Query: 28 KLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
+LS + ++ G I + V SD+I +VK +IQ G +Q L+F G++L S
Sbjct: 72 RLSGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQSLIFAGKQL-EDGS 130
Query: 88 RVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFV 147
+ DY + + LHLVLRLS I V T+ GK VE + VK +I K E +
Sbjct: 131 TLSDYNIQKESTLHLVLRLSGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGI 188
Query: 148 DLKNQELICDGEELEDQRLITDICKRNEAVIHLLVRKSA 186
Q L+ G++LED ++D + E+ +HL++R S
Sbjct: 189 PPDQQSLMFAGKQLEDGSTLSDYNIQKESTLHLVLRLSG 227
>gi|301094179|ref|XP_002997933.1| ubiquitin, putative [Phytophthora infestans T30-4]
gi|262109719|gb|EEY67771.1| ubiquitin, putative [Phytophthora infestans T30-4]
Length = 175
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 80/145 (55%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 7 TLTGKTITLDVEPSDSIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 65
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE ++ VKQ+I K E + Q LI G
Sbjct: 66 TLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDK--EGIPPDQQRLIFAG 123
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D + E+ +HL++R
Sbjct: 124 KQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 83 TLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 141
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVE 127
LHLVLRL I V T+ GK VE
Sbjct: 142 TLHLVLRLRGGMQIFVKTLTGKTITLDVE 170
>gi|324515150|gb|ADY46106.1| Polyubiquitin-A [Ascaris suum]
Length = 267
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 20/191 (10%)
Query: 10 PVLEESLNFPGNF--------THRPEKLSNDSILIFLSVG---------GSVIPMRVMES 52
P +E+ L + G + EK S +L+ L G G I + V S
Sbjct: 37 PPIEQRLIYAGRHLQDCRTASDYNIEKASTLHLLLRLPCGMQIFVKTLTGKTITLEVESS 96
Query: 53 DSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAI 112
D+I +VK +IQ G +Q+L+F G++L + ++ DY + +G+++HLV RL I
Sbjct: 97 DTIENVKAKIQDKEGIRPDQQRLIFAGKQLD-DHQKIGDYNIRNGSIVHLVFRLRGGMLI 155
Query: 113 TVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICK 172
+ T+ G VE V +VK +I K E + Q LI G++LED R ++D
Sbjct: 156 FIKTLTGVTMTLEVELSDKVQHVKAKIYDK--EGIPPDQQRLIYAGKQLEDDRTLSDYNI 213
Query: 173 RNEAVIHLLVR 183
+ E+ +HL++R
Sbjct: 214 QKESTVHLVLR 224
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L++ GR L + DY +
Sbjct: 3 IFVKTISGKTITLEVEPSDTIENVKTKIQDKEGIPPIEQRLIYAGRHLQDCRT-ASDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHL+LRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 EKASTLHLLLRLPCGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDK--EGIRPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++L+D + I D RN +++HL+ R
Sbjct: 120 IFAGKQLDDHQKIGDYNIRNGSIVHLVFR 148
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 20 GNFTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEG 79
G+ H +L ++ ++ G + + V SD + VK +I G +Q+L++ G
Sbjct: 140 GSIVHLVFRLRGGMLIFIKTLTGVTMTLEVELSDKVQHVKAKIYDKEGIPPDQQRLIYAG 199
Query: 80 RELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVK 136
++L + + DY + + +HLVLRL I++ T+ G V+ +V +K
Sbjct: 200 KQL-EDDRTLSDYNIQKESTVHLVLRLRGGMDISINTLVGDAMTLQVDASDSVENIK 255
>gi|323452163|gb|EGB08038.1| polyubiquitin [Aureococcus anophagefferens]
Length = 305
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 104/211 (49%), Gaps = 13/211 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VKQ+I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVSIEATELN 207
I G++LED R ++D + E+ +HL++R ++ K + D E S +
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVK 179
Query: 208 EKGADVVG--EHQFETLFMGYQIRERKLLQN 236
+K D G Q +F G Q+ + + L +
Sbjct: 180 QKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 210
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VKQ+I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|92790170|emb|CAI83754.1| Polyubiqutin 1 [Polyplastron multivesiculatum]
Length = 379
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 1 IFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 59
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 60 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDK--EGIPPDQQRL 117
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 118 IFAGKQLEDNRTLADYNIQKESTLHLVLR 146
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 153 IFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 211
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 212 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDK--EGIPPDQQRL 269
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 270 IFAGKQLEDNRTLADYNIQKESTLHLVLR 298
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 229 IFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 287
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 288 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDK--EGIPPDQQRL 345
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 346 IFAGKQLEDNRTLADYNIQKESTLHLVLR 374
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 305 IFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 363
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 364 QKESTLHLVLRL 375
>gi|28436487|gb|AAO43310.1| putative polyubiquitin [Arabidopsis thaliana]
Length = 250
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I ++K +IQ G +Q+L+F G++L + + DY + +
Sbjct: 27 TLTGKTITLEVKSSDTIDNIKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 85
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK+ VE + VK +I K E++ Q LI G
Sbjct: 86 TLHLVLRLRGGMQIFVKTLTGKIITLEVESSDTIDNVKAKIQDK--EWIPPDQQRLIFAG 143
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 144 KQLEDGRTLADYNIQKESTLHLVLR 168
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G +I + V SD+I +VK +IQ +Q+L+F G++L + + DY + +
Sbjct: 103 TLTGKIITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 161
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 162 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 219
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + + E+ +HL++R
Sbjct: 220 KQLEDGRTLAVYNIQKESTLHLVLR 244
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 91 DYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLK 150
DY + LHLVLRL I V T+ GK V+ + +K +I K E +
Sbjct: 2 DYNIQKEPTLHLVLRLRGGMQIFVKTLTGKTITLEVKSSDTIDNIKAKIQDK--EGIPPD 59
Query: 151 NQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R + D + E+ +HL++R
Sbjct: 60 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 92
>gi|323448851|gb|EGB04744.1| ubiquitin [Aureococcus anophagefferens]
Length = 229
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 104/211 (49%), Gaps = 13/211 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VKQ+I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVSIEATELN 207
I G++LED R ++D + E+ +HL++R ++ K + D E S +
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVK 179
Query: 208 EKGADVVG--EHQFETLFMGYQIRERKLLQN 236
+K D G Q +F G Q+ + + L +
Sbjct: 180 QKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 210
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VKQ+I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|403413175|emb|CCL99875.1| predicted protein [Fibroporia radiculosa]
Length = 312
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 86/156 (55%), Gaps = 4/156 (2%)
Query: 29 LSNDSILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
+S+ ++ IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L +
Sbjct: 3 ISSSNMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 62
Query: 88 RVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFV 147
+ DY + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 63 -LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGI 119
Query: 148 DLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R ++D + E+ +HL++R
Sbjct: 120 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 155
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 162 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 220
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 221 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 278
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 279 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 307
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 238 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 296
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 297 QKESTLHLVLRL 308
>gi|92790172|emb|CAI83755.1| Polyubiqutin 2 [Polyplastron multivesiculatum]
Length = 346
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 44 IFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 102
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 103 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDK--EGIPPDQQRL 160
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 161 IFAGKQLEDNRTLADYNIQKESTLHLVLR 189
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 120 IFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 178
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 179 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDK--EGIPPDQQRL 236
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 237 IFAGKQLEDNRTLADYNIQKESTLHLVLR 265
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 196 IFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 254
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 255 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDK--EGIPPDQQRL 312
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 313 IFAGKQLEDNRTLADYNIQKESTLHLVLR 341
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
Query: 72 KQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRN 131
+Q+L+F G++L N + DY + + LHLVLRL I V T+ GK VE
Sbjct: 5 QQRLIFAGKQL-EDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 63
Query: 132 VGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
+ VK +I K E + Q LI G++LED R + D + E+ +HL++R
Sbjct: 64 IDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 113
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 272 IFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 330
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 331 QKESTLHLVLRL 342
>gi|320031616|gb|EFW13576.1| ubiquitin [Coccidioides posadasii str. Silveira]
Length = 625
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 86/160 (53%), Gaps = 4/160 (2%)
Query: 24 HRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELA 83
+RP +L + L+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L
Sbjct: 313 YRPSRLPSCRSLV-KTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLE 371
Query: 84 RSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKG 143
+ + DY + + LHLVLRL I V T+ GK VE + VK +I K
Sbjct: 372 DGRT-LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK- 429
Query: 144 REFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
E + Q LI G++LED R ++D + E+ +HL++R
Sbjct: 430 -EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 468
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 475 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 533
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 534 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 591
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 592 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 620
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 551 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 609
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 610 QKESTLHLVLRL 621
>gi|355568283|gb|EHH24564.1| Polyubiquitin-C [Macaca mulatta]
Length = 229
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRLS I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLSGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSA 186
I G++LED R ++D + E+ +HL++R S
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLSG 151
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 28 KLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
+LS + ++ G I + V SD+I +VK +IQ G +Q+L+F G++L +
Sbjct: 148 RLSGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 88 RVRDYGLADGNVLHLVLRL 106
+ DY + + LHLVLRL
Sbjct: 208 -LSDYNIQKESTLHLVLRL 225
>gi|426247176|ref|XP_004017362.1| PREDICTED: polyubiquitin-C-like isoform 2 [Ovis aries]
Length = 310
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 84/158 (53%), Gaps = 4/158 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVRAKP 192
I G++LED R ++D + E+ +HL++R V + P
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVLSSP 309
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|426247174|ref|XP_004017361.1| PREDICTED: polyubiquitin-C-like isoform 1 [Ovis aries]
Length = 462
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 84/158 (53%), Gaps = 4/158 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVRAKP 192
I G++LED R ++D + E+ +HL++R V + P
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVLSSP 461
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK++IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKVKIQEKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|329665078|ref|NP_001193236.1| polyubiquitin-C [Bos taurus]
gi|302595881|sp|P0CH28.1|UBC_BOVIN RecName: Full=Polyubiquitin-C; Contains: RecName:
Full=Ubiquitin-related; Contains: RecName:
Full=Ubiquitin; Flags: Precursor
Length = 690
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 84/158 (53%), Gaps = 4/158 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 594 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 651
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVRAKP 192
I G++LED R ++D + E+ +HL++R V + P
Sbjct: 652 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVLSSP 689
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|15284030|dbj|BAB63443.1| ubiquitin 2 [Physarum polycephalum]
gi|19909902|dbj|BAB87824.1| polyubiquitin [Physarum polycephalum]
Length = 229
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I SVK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I SVK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I SVK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|15284034|dbj|BAB63445.1| ubiquitin 4 [Physarum polycephalum]
gi|19909906|dbj|BAB87826.1| polyubiquitin [Physarum polycephalum]
Length = 305
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I SVK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I SVK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I SVK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|28436485|gb|AAO43309.1| putative polyubiquitin [Arabidopsis thaliana]
Length = 250
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 27 TLTGKTITLEVQSSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 85
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E++ Q LI G
Sbjct: 86 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EWIPPDQQRLIFAG 143
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 144 KQLEDGRTLADYNIQKESTLHLVLR 168
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ +Q+L+F G++L + + DY + +
Sbjct: 103 TLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 161
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + + LI G
Sbjct: 162 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQKRLIFAG 219
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + + E+ +HL++R
Sbjct: 220 KQLEDGRTLAVYNIQKESTLHLVLR 244
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 91 DYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLK 150
DY + + LHLVLRL I V T+ GK V+ + VK +I K E +
Sbjct: 2 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVQSSDTIDNVKAKIQDK--EGIPPD 59
Query: 151 NQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R + D + E+ +HL++R
Sbjct: 60 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 92
>gi|15284032|dbj|BAB63444.1| ubiquitin 3 [Physarum polycephalum]
gi|19909904|dbj|BAB87825.1| polyubiquitin [Physarum polycephalum]
Length = 305
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I SVK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I SVK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 HKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I SVK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|334362473|gb|AEG78435.1| ubiquitin C variant 3 [Epinephelus coioides]
Length = 268
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 83/152 (54%), Gaps = 4/152 (2%)
Query: 33 SILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRD 91
S+ IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + D
Sbjct: 1 SMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSD 59
Query: 92 YGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKN 151
Y + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 60 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQ 117
Query: 152 QELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R ++D + E+ +HL++R
Sbjct: 118 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 149
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 156 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 214
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQ 138
+ LHLVLRL I V T+ GK VE + V Q
Sbjct: 215 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVXGQ 258
>gi|163573|gb|AAA30719.1| polyubiquitin, partial [Bos taurus]
Length = 245
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 81/154 (52%), Gaps = 3/154 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 94 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 152
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 153 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAG 210
Query: 159 EELEDQRLITDICKRNEAVIHLLVRKSAKVRAKP 192
++LED R ++D + E+ +HL++R V + P
Sbjct: 211 KQLEDGRTLSDYNIQKESTLHLVLRLRGGVLSSP 244
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 18 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 76
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 77 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAG 134
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D + E+ +HL++R
Sbjct: 135 KQLEDGRTLSDYNIQKESTLHLVLR 159
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 1 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAG 58
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D + E+ +HL++R
Sbjct: 59 KQLEDGRTLSDYNIQKESTLHLVLR 83
>gi|302847323|ref|XP_002955196.1| polyubiquitin [Volvox carteri f. nagariensis]
gi|300259488|gb|EFJ43715.1| polyubiquitin [Volvox carteri f. nagariensis]
Length = 229
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 105/207 (50%), Gaps = 13/207 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLL--VRKSAKVRAKPVQ-KDFEVSIEATELNEKGA 211
I G++LED R + D + E+ +HL+ +R ++ K + K+ E+ IE ++ E+
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMMIKVKTLTGKEIEIDIEPSDTIERIK 179
Query: 212 DVVGEH------QFETLFMGYQIRERK 232
+ V E Q +F G Q+ + K
Sbjct: 180 ERVEEKEGIPPVQQRLIFAGKQMNDDK 206
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK E +E + +K+++ +K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMMIKVKTLTGKEIEIDIEPSDTIERIKERVEEK--EGIPPVQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G+++ D + D +V+HL++
Sbjct: 196 IFAGKQMNDDKQAKDYNIEGGSVLHLVL 223
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + + SD+I +K R++ G +Q+L+F G+++ + + +DY + G+
Sbjct: 159 TLTGKEIEIDIEPSDTIERIKERVEEKEGIPPVQQRLIFAGKQM-NDDKQAKDYNIEGGS 217
Query: 99 VLHLVLRL 106
VLHLVL L
Sbjct: 218 VLHLVLAL 225
>gi|297809725|ref|XP_002872746.1| hypothetical protein ARALYDRAFT_911794 [Arabidopsis lyrata subsp.
lyrata]
gi|297809771|ref|XP_002872769.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318583|gb|EFH49005.1| hypothetical protein ARALYDRAFT_911794 [Arabidopsis lyrata subsp.
lyrata]
gi|297318606|gb|EFH49028.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 229
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + L Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPLDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G + +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPLDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|260806905|ref|XP_002598324.1| hypothetical protein BRAFLDRAFT_113894 [Branchiostoma floridae]
gi|229283596|gb|EEN54336.1| hypothetical protein BRAFLDRAFT_113894 [Branchiostoma floridae]
Length = 600
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 82/150 (54%), Gaps = 4/150 (2%)
Query: 35 LIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYG 93
LIF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY
Sbjct: 449 LIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYN 507
Query: 94 LADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQE 153
+ + LHLVLRL I V T+ GK VE + VK +I K E + Q
Sbjct: 508 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQR 565
Query: 154 LICDGEELEDQRLITDICKRNEAVIHLLVR 183
LI G++LED R ++D + E+ +HL++R
Sbjct: 566 LIFAGKQLEDGRTLSDYNIQKESTLHLVLR 595
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 4/202 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVRAKPVQKDFEVSIEATELNEKGADVV 214
I G++LED R ++D + E+ +HL+ K+ + ++ + +IE + + + +
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 483
Query: 215 GEHQFETLFMGYQIRERKLLQN 236
Q +F G Q+ + + L +
Sbjct: 484 PPDQQRLIFAGKQLEDGRTLSD 505
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 526 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 584
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 585 QKESTLHLVLRL 596
>gi|440791755|gb|ELR12993.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
gi|440792103|gb|ELR13331.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
Length = 220
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 4/200 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VKQ+I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVRAKPVQKDFEVSIEATELNEKGADVV 214
I G++LED R + D + E+ +HL+ K+ + ++ + +IE + + + +
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGI 179
Query: 215 GEHQFETLFMGYQIRERKLL 234
Q +F G Q+ + + L
Sbjct: 180 PPDQQRLIFAGKQLEDGRTL 199
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 77/149 (51%), Gaps = 13/149 (8%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHL+ V T+ GK VE + VKQ+I K E + Q L
Sbjct: 138 QKESTLHLIF---------VKTLTGKTITLEVESSDTIENVKQKIQDK--EGIPPDQQRL 186
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 187 IFAGKQLEDGRTLADYNIQKESTLHLVLR 215
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 35 LIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYG 93
LIF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY
Sbjct: 145 LIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYN 203
Query: 94 LADGNVLHLVLRL 106
+ + LHLVLRL
Sbjct: 204 IQKESTLHLVLRL 216
>gi|323451976|gb|EGB07851.1| ubiquitin [Aureococcus anophagefferens]
Length = 153
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 83/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VKQ+I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 11/134 (8%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VKQ+I K E + Q LI G++LED R ++D
Sbjct: 3 IFVKTLTGKTITLDVEPSDTIDNVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 172 KRNEAVIHLLVRKSAKVR-------AKPVQKDFEVSIEATELNEKGADVVG--EHQFETL 222
+ E+ +HL++R ++ K + D E S + +K D G Q +
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLI 120
Query: 223 FMGYQIRERKLLQN 236
F G Q+ + + L +
Sbjct: 121 FAGKQLEDGRTLSD 134
>gi|195337251|ref|XP_002035242.1| GM14032 [Drosophila sechellia]
gi|194128335|gb|EDW50378.1| GM14032 [Drosophila sechellia]
Length = 915
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 84/156 (53%), Gaps = 4/156 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 763 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGISPDQQRLIFAGKQLEDGRT-LSDYNI 821
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 822 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 879
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVRA 190
I G++LED R ++D + E+ +HL++R ++A
Sbjct: 880 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIQA 915
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTINLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 670 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 727
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 728 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
>gi|578549|emb|CAA80335.1| ubiquitin [Tetrahymena pyriformis]
Length = 303
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 80/145 (55%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V ++D+I ++K +IQ G +Q+L+F G++L + V DY + +
Sbjct: 83 TLTGKTITLDVAQTDNIENIKAKIQDKEGIPSDQQRLIFAGKQLEDERT-VSDYNIQKES 141
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL + V T+ GK ++ N+ VK +I K E + Q LI G
Sbjct: 142 TLHLVLRLRGGMQVFVKTLTGKTITLDIDSSDNIENVKAKIQDK--EGIPADQQRLIFAG 199
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R +TD + E+ +HL++R
Sbjct: 200 KQLEDGRTVTDYNIQKESTLHLVLR 224
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + + SD+I +VK +IQ G +Q+L+F G++L + V DY + +
Sbjct: 159 TLTGKTITLDIDSSDNIENVKAKIQDKEGIPADQQRLIFAGKQLEDGRT-VTDYNIQKES 217
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I + T+ GK V N+ VK QI K E + + Q LI G
Sbjct: 218 TLHLVLRLRGGMQIFMKTLTGKTITLDVNSADNIEKVKAQIQDK--EGIPVDQQRLIFAG 275
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED + ++D E+ ++L++R
Sbjct: 276 KQLEDGKTVSDYNISKESTLNLVLR 300
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G + + V +D+I ++K +I G +Q+L+F G++L + V DY +
Sbjct: 3 IFVKTLTGKTVALDVSSTDNIDTIKQKIYDKEGIPSDQQRLIFAGKQLEDGRT-VSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ +HLVLRL + V T+ GK V + N+ +K +I K E + Q L
Sbjct: 62 QKESTVHLVLRLRGGMQVFVKTLTGKTITLDVAQTDNIENIKAKIQDK--EGIPSDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED+R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDERTVSDYNIQKESTLHLVLR 148
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D+I VK +IQ G V +Q+L+F G++L + V DY +
Sbjct: 231 IFMKTLTGKTITLDVNSADNIEKVKAQIQDKEGIPVDQQRLIFAGKQLEDGKT-VSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ + L+LVLRL
Sbjct: 290 SKESTLNLVLRL 301
>gi|92790156|emb|CAI83747.1| Polyubiqutin 1 [Isotricha prostoma]
Length = 366
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 13/209 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 64 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 122
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 123 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 180
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATE 205
I G++LED R + D + E+ +HL++R ++ K + D E S IE +
Sbjct: 181 IFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVK 240
Query: 206 LNEKGADVVGEHQFETLFMGYQIRERKLL 234
+ + + Q +F G Q+ + + L
Sbjct: 241 AKIQDKEGIPPDQQRLIFAGKQLEDNRTL 269
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 13/209 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 140 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 198
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 199 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 256
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATE 205
I G++LED R + D + E+ +HL++R ++ K + D E S IE +
Sbjct: 257 IFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVK 316
Query: 206 LNEKGADVVGEHQFETLFMGYQIRERKLL 234
+ + + Q +F G Q+ + + L
Sbjct: 317 AKIQDKEGIPPDQQRLIFAGKQLEDNRTL 345
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 216 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 274
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 275 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 332
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 333 IFAGKQLEDNRTLADYNIQKESTLHLVLR 361
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 94/195 (48%), Gaps = 12/195 (6%)
Query: 49 VMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSD 108
V SD+I +VK +IQ G +Q+L+F G++L N + DY + + LHLVLRL
Sbjct: 2 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNIQKESTLHLVLRLRG 60
Query: 109 LQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLIT 168
I V T+ GK VE + VK +I K E + Q LI G++LED R +
Sbjct: 61 GMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLA 118
Query: 169 DICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATELNEKGADVVGEHQF 219
D + E+ +HL++R ++ K + D E S IE + + + + Q
Sbjct: 119 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQ 178
Query: 220 ETLFMGYQIRERKLL 234
+F G Q+ + + L
Sbjct: 179 RLIFAGKQLEDNRTL 193
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 292 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 350
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 351 QKESTLHLVLRL 362
>gi|75858833|gb|ABA28993.1| polyubiquitin [Symbiodinium sp. C3]
Length = 176
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDSIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDSIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVE 127
+ LHLVLRL I V T+ GK VE
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 170
>gi|118399883|ref|XP_001032265.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|89286605|gb|EAR84602.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
Length = 1252
Score = 82.4 bits (202), Expect = 3e-13, Method: Composition-based stats.
Identities = 61/208 (29%), Positives = 102/208 (49%), Gaps = 12/208 (5%)
Query: 38 LSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADG 97
+++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 1029 MTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKE 1087
Query: 98 NVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICD 157
+ LHLVLRL I V T+ GK VE + VK +I K E + Q LI
Sbjct: 1088 STLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDK--EGIPPDQQRLIFA 1145
Query: 158 GEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATELNE 208
G++LED R ++D + E+ +HL++R ++ K + D E S IE +
Sbjct: 1146 GKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKI 1205
Query: 209 KGADVVGEHQFETLFMGYQIRERKLLQN 236
+ + + Q +F G Q+ + + L +
Sbjct: 1206 QDKEGIPPDQQRLIFAGKQLEDGRTLSD 1233
Score = 79.0 bits (193), Expect = 3e-12, Method: Composition-based stats.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 1106 TLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 1164
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 1165 TLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDK--EGIPPDQQRLIFAG 1222
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D + E+ +HL++R
Sbjct: 1223 KQLEDGRTLSDYNIQKESTLHLVLR 1247
Score = 46.2 bits (108), Expect = 0.020, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 1182 TLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 1240
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 1241 TLHLVLRL 1248
>gi|197129067|gb|ACH45565.1| putative ubiquitin C variant 12 [Taeniopygia guttata]
Length = 381
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G KQ+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDKQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDKQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|66358028|ref|XP_626192.1| polyubiquitin with 3 Ub domains [Cryptosporidium parvum Iowa II]
gi|46227264|gb|EAK88214.1| polyubiquitin with 3 Ub domains [Cryptosporidium parvum Iowa II]
Length = 241
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 84/154 (54%), Gaps = 4/154 (2%)
Query: 31 NDSILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRV 89
N ++ IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + +
Sbjct: 10 NTNMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-L 68
Query: 90 RDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDL 149
DY + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 69 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPP 126
Query: 150 KNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R ++D + E+ +HL++R
Sbjct: 127 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 160
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 91 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 149
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 150 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 207
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 208 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 236
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 167 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 225
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 226 QKESTLHLVLRL 237
>gi|2894308|emb|CAA11269.1| polyubiquitin [Nicotiana tabacum]
Length = 381
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VKQ+I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VKQ+I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VKQ+I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|449479809|ref|XP_004177054.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-C-like [Taeniopygia
guttata]
Length = 534
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 83/156 (53%), Gaps = 4/156 (2%)
Query: 29 LSNDSILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
LS IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L +
Sbjct: 301 LSGQQWQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 360
Query: 88 RVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFV 147
+ DY + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 361 -LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGI 417
Query: 148 DLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R ++D + E+ +HL++R
Sbjct: 418 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 453
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 384 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 442
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 443 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 500
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 501 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 529
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 76/157 (48%), Gaps = 4/157 (2%)
Query: 28 KLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
+L ++ L + G I + V SD+I +VK +IQ G + L+F G++L +
Sbjct: 224 RLRGGCXVLPLCMTGKTITLEVELSDTIENVKAKIQDKEGIPPDSRXLIFAGKQLEDGRT 283
Query: 88 RVRDYGLADGNVLHLVLRLSDLQA-ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREF 146
DY + V + LS Q I V T+ GK VE + VK +I K E
Sbjct: 284 -FSDYNIQKVAVAETSVCLSGQQWQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EG 340
Query: 147 VDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
+ Q LI G++LED R ++D + E+ +HL++R
Sbjct: 341 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 377
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 460 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 518
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 519 QKESTLHLVLRL 530
>gi|302393779|sp|P42740.2|UBIQP_AGLNE RecName: Full=Polyubiquitin; Contains: RecName:
Full=Ubiquitin-related 1; Contains: RecName:
Full=Ubiquitin; Contains: RecName:
Full=Ubiquitin-related 2; Contains: RecName:
Full=Ubiquitin-related 3; Flags: Precursor
gi|166336|gb|AAA72126.1| polyubiquitin [Aglaothamnion neglectum]
gi|445141|prf||1908440A poly-ubiquitin
Length = 457
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY L
Sbjct: 231 IFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNL 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTITGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNLQKESTLHLVLR 300
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTITGKTITLEVESSDTIENVKTKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY
Sbjct: 3 IFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNN 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|358060688|dbj|GAA93627.1| hypothetical protein E5Q_00271 [Mixia osmundae IAM 14324]
Length = 1022
Score = 82.0 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 57/182 (31%), Positives = 93/182 (51%), Gaps = 4/182 (2%)
Query: 30 SNDSILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSR 88
S+ ++ IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L +
Sbjct: 255 SDTNMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT- 313
Query: 89 VRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVD 148
+ DY + LVLRL I V T+ GK VE + VK +I K E +
Sbjct: 314 LSDYNIRRSLPSTLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIP 371
Query: 149 LKNQELICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVRAKPVQKDFEVSIEATELNE 208
Q LI G++LED R ++D + E+ +HL++R A+ ++ V+I T+ N
Sbjct: 372 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGALARAALVEYWVNITYTQANP 431
Query: 209 KG 210
G
Sbjct: 432 DG 433
>gi|92790160|emb|CAI83749.1| Polyubiqutin 3 [Isotricha prostoma]
Length = 374
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 13/209 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 148 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 206
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 207 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 264
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATE 205
I G++LED R + D + E+ +HL++R ++ K + D E S IE +
Sbjct: 265 IFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVK 324
Query: 206 LNEKGADVVGEHQFETLFMGYQIRERKLL 234
+ + + Q +F G Q+ + + L
Sbjct: 325 AKIQDKEGIPPDQQRLIFAGKQLEDNRTL 353
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 224 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 282
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 283 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 340
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 341 IFAGKQLEDNRTLADYNIQKESTLHLVLR 369
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 12/202 (5%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY + + LH
Sbjct: 3 GKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNIQKESTLH 61
Query: 102 LVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEEL 161
LVLRL I V T+ GK VE + VK +I K E + Q LI G++L
Sbjct: 62 LVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQL 119
Query: 162 EDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATELNEKGAD 212
ED R + D + E+ +HL++R ++ K + D E S IE + + +
Sbjct: 120 EDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKE 179
Query: 213 VVGEHQFETLFMGYQIRERKLL 234
+ Q +F G Q+ + + L
Sbjct: 180 GIPPDQQRLIFAGKQLEDNRTL 201
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 300 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 358
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 359 QKESTLHLVLRL 370
>gi|92790164|emb|CAI83751.1| Polyubiqutin 1 [Entodinium caudatum]
Length = 297
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 147 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 205
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 206 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 263
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 264 IFAGKQLEDNRTLADYNIQKESTLHLVLR 292
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 12/202 (5%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY + + LH
Sbjct: 2 GKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNIQKESTLH 60
Query: 102 LVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEEL 161
LVLRL I V T+ GK VE + VK +I K E + Q LI G++L
Sbjct: 61 LVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQL 118
Query: 162 EDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATELNEKGAD 212
ED R + D + E+ +HL++R ++ K + D E S IE + + +
Sbjct: 119 EDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKE 178
Query: 213 VVGEHQFETLFMGYQIRERKLL 234
+ Q +F G Q+ + + L
Sbjct: 179 GIPPDQQRLIFAGKQLEDNRTL 200
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 223 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 281
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 282 QKESTLHLVLRL 293
>gi|92790182|emb|CAI83760.1| Polyubiqutin 1 [Epidinium ecaudatum]
Length = 378
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 13/209 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 152 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 210
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 211 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 268
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATE 205
I G++LED R + D + E+ +HL++R ++ K + D E S IE +
Sbjct: 269 IFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVK 328
Query: 206 LNEKGADVVGEHQFETLFMGYQIRERKLL 234
+ + + Q +F G Q+ + + L
Sbjct: 329 AKIQDKEGIPPDQQRLIFAGKQLEDNRTL 357
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 99/205 (48%), Gaps = 12/205 (5%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY + +
Sbjct: 4 TLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNIQKES 62
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 63 TLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAG 120
Query: 159 EELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATELNEK 209
++LED R + D + E+ +HL++R ++ K + D E S IE + +
Sbjct: 121 KQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQ 180
Query: 210 GADVVGEHQFETLFMGYQIRERKLL 234
+ + Q +F G Q+ + + L
Sbjct: 181 DKEGIPPDQQRLIFAGKQLEDNRTL 205
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 228 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 286
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 287 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 344
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 345 IFAGKQLEDNRTLADYNIQKESTLHLVLR 373
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 304 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 362
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 363 QKESTLHLVLRL 374
>gi|92790176|emb|CAI83757.1| Polyubiqutin 4 [Polyplastron multivesiculatum]
Length = 177
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 27 IFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 85
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 86 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDK--EGIPPDQQRL 143
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 144 IFAGKQLEDNRTLADYNIQKESTLHLVLR 172
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 86 NSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGRE 145
N + DY + + LHLVLRL I V T+ GK VE + VK +I K E
Sbjct: 1 NRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDK--E 58
Query: 146 FVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
+ Q LI G++LED R + D + E+ +HL++R
Sbjct: 59 GIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 96
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 103 IFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 161
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 162 QKESTLHLVLRL 173
>gi|92790148|emb|CAI83743.1| Polyubiqutin 3 [Dasytricha ruminantium]
Length = 363
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 13/209 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 61 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 119
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 120 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 177
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATE 205
I G++LED R + D + E+ +HL++R ++ K + D E S IE +
Sbjct: 178 IFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVK 237
Query: 206 LNEKGADVVGEHQFETLFMGYQIRERKLL 234
+ + + Q +F G Q+ + + L
Sbjct: 238 AKIQDKEGIPPDQQRLIFAGKQLEDNRTL 266
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 13/209 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 137 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 195
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 196 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 253
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATE 205
I G++LED R + D + E+ +HL++R ++ K + D E S IE +
Sbjct: 254 IFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVK 313
Query: 206 LNEKGADVVGEHQFETLFMGYQIRERKLL 234
+ + + Q +F G Q+ + + L
Sbjct: 314 AKIQDKEGIPPDQQRLIFAGKQLEDNRTL 342
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 213 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 271
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 272 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 329
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 330 IFAGKQLEDNRTLADYNIQKESTLHLVLR 358
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 93/192 (48%), Gaps = 12/192 (6%)
Query: 52 SDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQA 111
SD+I +VK +IQ G +Q+L+F G++L N + DY + + LHLVLRL
Sbjct: 2 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNIQKESTLHLVLRLRGGMQ 60
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R + D
Sbjct: 61 IFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYN 118
Query: 172 KRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATELNEKGADVVGEHQFETL 222
+ E+ +HL++R ++ K + D E S IE + + + + Q +
Sbjct: 119 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLI 178
Query: 223 FMGYQIRERKLL 234
F G Q+ + + L
Sbjct: 179 FAGKQLEDNRTL 190
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 289 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 347
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 348 QKESTLHLVLRL 359
>gi|92790152|emb|CAI83745.1| Polyubiqutin 1 [Isotricha intestinalis]
Length = 301
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 99/205 (48%), Gaps = 12/205 (5%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY + +
Sbjct: 3 TLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNIQKES 61
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 62 TLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAG 119
Query: 159 EELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATELNEK 209
++LED R + D + E+ +HL++R ++ K + D E S IE + +
Sbjct: 120 KQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQ 179
Query: 210 GADVVGEHQFETLFMGYQIRERKLL 234
+ + Q +F G Q+ + + L
Sbjct: 180 DKEGIPPDQQRLIFAGKQLEDNRTL 204
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 151 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 209
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 210 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 267
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 268 IFAGKQLEDNRTLADYNIQKESTLHLVLR 296
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 227 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 285
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 286 QKESTLHLVLRL 297
>gi|92790144|emb|CAI83741.1| Polyubiqutin 1 [Dasytricha ruminantium]
gi|92790150|emb|CAI83744.1| Polyubiqutin 4 [Dasytricha ruminantium]
gi|92790154|emb|CAI83746.1| Polyubiqutin 2 [Isotricha intestinalis]
gi|92790158|emb|CAI83748.1| Polyubiqutin 2 [Isotricha prostoma]
Length = 379
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 13/209 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 1 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 59
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 60 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 117
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATE 205
I G++LED R + D + E+ +HL++R ++ K + D E S IE +
Sbjct: 118 IFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVK 177
Query: 206 LNEKGADVVGEHQFETLFMGYQIRERKLL 234
+ + + Q +F G Q+ + + L
Sbjct: 178 AKIQDKEGIPPDQQRLIFAGKQLEDNRTL 206
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 13/209 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 153 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 211
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 212 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 269
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATE 205
I G++LED R + D + E+ +HL++R ++ K + D E S IE +
Sbjct: 270 IFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVK 329
Query: 206 LNEKGADVVGEHQFETLFMGYQIRERKLL 234
+ + + Q +F G Q+ + + L
Sbjct: 330 AKIQDKEGIPPDQQRLIFAGKQLEDNRTL 358
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 229 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 287
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 288 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 345
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 346 IFAGKQLEDNRTLADYNIQKESTLHLVLR 374
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 305 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 363
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 364 QKESTLHLVLRL 375
>gi|390334818|ref|XP_003724023.1| PREDICTED: uncharacterized protein LOC754856 [Strongylocentrotus
purpuratus]
Length = 1673
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 670 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDK--EGIPPDQQRL 727
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 728 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 687 IFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 745
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 746 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDK--EGIPPDQQRL 803
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 804 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 832
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 839 IFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 897
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 898 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDK--EGIPPDQQRL 955
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 956 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 984
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 915 IFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 973
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 974 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDK--EGIPPDQQRL 1031
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 1032 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 1060
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 1067 IFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 1125
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 1126 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDK--EGIPPDQQRL 1183
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 1184 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 1212
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 1143 IFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 1201
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 1202 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDK--EGIPPDQQRL 1259
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 1260 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 1288
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 1295 IFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 1353
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 1354 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDK--EGIPPDQQRL 1411
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 1412 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 1440
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 1371 IFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 1429
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 1430 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDK--EGIPPDQQRL 1487
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 1488 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 1516
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 1523 IFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 1581
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 1582 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDK--EGIPPDQQRL 1639
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 1640 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 1668
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
L I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 62 QKXQTFLFFYSLQVNMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 1599 IFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 1657
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 1658 QKESTLHLVLRL 1669
>gi|28436483|gb|AAO43308.1| putative polyubiquitin [Arabidopsis thaliana]
Length = 250
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 23 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 81
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E++ Q L
Sbjct: 82 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EWIPPDQQRL 139
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 140 IFAGKQLEDGRTLADYNIQKESTLHLVLR 168
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ +Q+L+F G++L + + DY +
Sbjct: 99 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRT-LADYNI 157
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 158 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 215
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + + E+ +HL++R
Sbjct: 216 IFAGKQLEDGRTLAVYNIQKESTLHLVLR 244
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 91 DYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLK 150
DY + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 2 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPD 59
Query: 151 NQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R + D + E+ +HL++R
Sbjct: 60 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 92
>gi|224503947|gb|ACN53545.1| polyubiquitin-like protein [Piriformospora indica]
Length = 229
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IFL ++ G I + V SD+I VK +IQ G +Q+ +F G++L + + DY +
Sbjct: 79 IFLKTLTGKTITLEVESSDTIDDVKTKIQDKEGIPPDQQRWIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL+ I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLTGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I VK IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDDVKTNIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYDI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I + T+ GK VE + VK +I K E + Q
Sbjct: 62 QKESTLHLVLRLRGGMQIFLKTLTGKTITLEVESSDTIDDVKTKIQDK--EGIPPDQQRW 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|145498417|ref|XP_001435196.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402326|emb|CAK67799.1| unnamed protein product [Paramecium tetraurelia]
Length = 369
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 12/207 (5%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 147 TLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 205
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 206 TLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDK--EGIPPDQQRLIFAG 263
Query: 159 EELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATELNEK 209
++LED R ++D + E+ +HL++R ++ K + D E S I+A + +
Sbjct: 264 KQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQ 323
Query: 210 GADVVGEHQFETLFMGYQIRERKLLQN 236
+ + Q +F G Q+ + + L +
Sbjct: 324 DKEGIPPDQQRLIFAGKQLEDGRTLSD 350
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 219 IFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 277
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 278 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDK--EGIPPDQQRL 335
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 336 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 364
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 11/204 (5%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVRAKPVQKDFEVS--IEATELNEKGAD 212
I E ++IT I + + +++ + K + D E S I+A + + +
Sbjct: 120 IF----AEHSQIIT-IQRGINPSLGFKIKRRNTLTGKTITLDVEPSDTIDAVKAKIQDKE 174
Query: 213 VVGEHQFETLFMGYQIRERKLLQN 236
+ Q +F G Q+ + + L +
Sbjct: 175 GIPPDQQRLIFAGKQLEDGRTLSD 198
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 295 IFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 353
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 354 QKESTLHLVLRL 365
>gi|239788927|dbj|BAH71116.1| ACYPI006410 [Acyrthosiphon pisum]
Length = 154
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|193678764|ref|XP_001950434.1| PREDICTED: polyubiquitin-A-like [Acyrthosiphon pisum]
Length = 686
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 594 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDK--EGIPPDQQRL 651
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 652 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 670 QKESTLHLVLRL 681
>gi|24657014|ref|NP_728908.1| Ubiquitin-63E, isoform A [Drosophila melanogaster]
gi|24657019|ref|NP_523909.2| Ubiquitin-63E, isoform B [Drosophila melanogaster]
gi|45552935|ref|NP_995994.1| Ubiquitin-63E, isoform C [Drosophila melanogaster]
gi|442630045|ref|NP_001261383.1| Ubiquitin-63E, isoform D [Drosophila melanogaster]
gi|302595965|sp|P0CG69.1|UBIQP_DROME RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|23092947|gb|AAF47806.3| Ubiquitin-63E, isoform A [Drosophila melanogaster]
gi|23092948|gb|AAG22241.2| Ubiquitin-63E, isoform B [Drosophila melanogaster]
gi|45445791|gb|AAS64964.1| Ubiquitin-63E, isoform C [Drosophila melanogaster]
gi|440215267|gb|AGB94078.1| Ubiquitin-63E, isoform D [Drosophila melanogaster]
Length = 763
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 84/156 (53%), Gaps = 4/156 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 670 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 727
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVRA 190
I G++LED R ++D + E+ +HL++R ++A
Sbjct: 728 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIQA 763
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
>gi|124784679|gb|ABN14988.1| polyubiquitin [Taenia asiatica]
Length = 251
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 64 IFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 122
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLR+ I V T+ GK VE + VK +I K E + Q L
Sbjct: 123 QKESTLHLVLRMRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 180
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 181 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 209
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 74/135 (54%), Gaps = 3/135 (2%)
Query: 49 VMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSD 108
V SDSI +VK +IQ G +Q+L+F G++L + + DY + + LHLVLRL
Sbjct: 2 VEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRG 60
Query: 109 LQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLIT 168
I V T+ GK VE ++ VK +I K E + Q LI G++LED R ++
Sbjct: 61 GMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLS 118
Query: 169 DICKRNEAVIHLLVR 183
D + E+ +HL++R
Sbjct: 119 DYNIQKESTLHLVLR 133
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 140 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 198
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK 142
+ LHLVLRL I V T+ GK VE ++ VK +I K
Sbjct: 199 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIPDK 246
>gi|21429768|gb|AAM50562.1| AT20865p [Drosophila melanogaster]
Length = 1067
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 84/156 (53%), Gaps = 4/156 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 915 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 973
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 974 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 1031
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVRA 190
I G++LED R ++D + E+ +HL++R ++A
Sbjct: 1032 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIQA 1067
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 670 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 727
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 728 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 763 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 821
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 822 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 879
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 880 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 908
>gi|440798058|gb|ELR19129.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
Length = 229
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VKQ+I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VKQ+I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|92790146|emb|CAI83742.1| Polyubiquitin 2 [Dasytricha ruminantium]
Length = 354
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 13/209 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 52 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 110
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 111 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 168
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATE 205
I G++LED R + D + E+ +HL++R ++ K + D E S IE +
Sbjct: 169 IFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVK 228
Query: 206 LNEKGADVVGEHQFETLFMGYQIRERKLL 234
+ + + Q +F G Q+ + + L
Sbjct: 229 AKIQDKEGIPPDQQRLIFAGKQLEDNRTL 257
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 13/209 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 128 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 186
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 187 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 244
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATE 205
I G++LED R + D + E+ +HL++R ++ K + D E S IE +
Sbjct: 245 IFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVK 304
Query: 206 LNEKGADVVGEHQFETLFMGYQIRERKLL 234
+ + + Q +F G Q+ + + L
Sbjct: 305 AKIQDKEGIPPDQQRLIFAGKQLEDNRTL 333
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 204 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 262
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 263 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 320
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 321 IFAGKQLEDNRTLADYNIQKESTLHLVLR 349
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 86/183 (46%), Gaps = 12/183 (6%)
Query: 61 RIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGK 120
+IQ G +Q+L+F G++L N + DY + + LHLVLRL I V T+ GK
Sbjct: 2 KIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 60
Query: 121 VFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHL 180
VE + VK +I K E + Q LI G++LED R + D + E+ +HL
Sbjct: 61 TITLDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 118
Query: 181 LVRKSAKVR-------AKPVQKDFEVS--IEATELNEKGADVVGEHQFETLFMGYQIRER 231
++R ++ K + D E S IE + + + + Q +F G Q+ +
Sbjct: 119 VLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDN 178
Query: 232 KLL 234
+ L
Sbjct: 179 RTL 181
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 280 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 338
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 339 QKESTLHLVLRL 350
>gi|193627304|ref|XP_001947010.1| PREDICTED: polyubiquitin-G-like [Acyrthosiphon pisum]
Length = 381
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|158753|gb|AAA28997.1| ubiquitin [Drosophila melanogaster]
Length = 231
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 84/156 (53%), Gaps = 4/156 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVRA 190
I G++LED R ++D + E+ +HL++R ++A
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIQA 231
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|197129053|gb|ACH45551.1| putative ubiquitin C variant 1 [Taeniopygia guttata]
Length = 305
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L R DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRRRA-DYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|145530714|ref|XP_001451129.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418773|emb|CAK83732.1| unnamed protein product [Paramecium tetraurelia]
Length = 624
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 37 FLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLAD 96
+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 172 WNTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQK 230
Query: 97 GNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELIC 156
+ LHLVLRL I V T+ GK VE + VK +I K E + Q LI
Sbjct: 231 ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDK--EGIPPDQQRLIF 288
Query: 157 DGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATELN 207
G++LED R ++D + E+ +HL++R ++ K + D E S I+A +
Sbjct: 289 AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAK 348
Query: 208 EKGADVVGEHQFETLFMGYQIRERKLLQN 236
+ + + Q +F G Q+ + + L +
Sbjct: 349 IQDKEGIPPDQQRLIFAGKQLEDGRTLSD 377
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 13/211 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 322 IFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 380
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 381 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDK--EGIPPDQQRL 438
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATE 205
I G++LED R ++D + E+ +HL++R ++ K + D E S I+A +
Sbjct: 439 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKSLTGKTITLDVEPSDTIDAVK 498
Query: 206 LNEKGADVVGEHQFETLFMGYQIRERKLLQN 236
+ + + Q +F G Q+ + + L +
Sbjct: 499 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 529
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ S+ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 474 IFVKSLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 532
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 533 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDK--EGIPPDQQRL 590
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 591 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 619
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 28 IFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 86
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK 142
+ LHLVLRL T+ GK VE + VK +I K
Sbjct: 87 QKESTLHLVLRLKRW-----NTLTGKTITLDVEPSDTIDAVKAKIQDK 129
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 550 IFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 608
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 609 QKESTLHLVLRL 620
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 102 LVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEEL 161
LVLRL I V T+ GK VE + VK +I K E + Q LI G++L
Sbjct: 18 LVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDK--EGIPPDQQRLIFAGKQL 75
Query: 162 EDQRLITDICKRNEAVIHLLVR 183
ED R ++D + E+ +HL++R
Sbjct: 76 EDGRTLSDYNIQKESTLHLVLR 97
>gi|239799385|dbj|BAH70616.1| ACYPI007765 [Acyrthosiphon pisum]
Length = 153
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|92790166|emb|CAI83752.1| Polyubiqutin 1 [Eudiplodinium maggii]
Length = 259
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 13/209 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 33 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 91
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 92 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 149
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATE 205
I G++LED R + D + E+ +HL++R ++ K + D E S IE +
Sbjct: 150 IFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVK 209
Query: 206 LNEKGADVVGEHQFETLFMGYQIRERKLL 234
+ + + Q +F G Q+ + + L
Sbjct: 210 AKIQDKEGIPPDQQRLIFAGKQLEDNRTL 238
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 109 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 167
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 168 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 225
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 226 IFAGKQLEDNRTLADYNIQKESTLHLVLR 254
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 12/165 (7%)
Query: 79 GRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQ 138
G++L N + DY + + LHLVLRL I V T+ GK VE + VK +
Sbjct: 1 GKQL-EDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAK 59
Query: 139 IAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AK 191
I K E + Q LI G++LED R + D + E+ +HL++R ++ K
Sbjct: 60 IQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 117
Query: 192 PVQKDFEVS--IEATELNEKGADVVGEHQFETLFMGYQIRERKLL 234
+ D E S IE + + + + Q +F G Q+ + + L
Sbjct: 118 TITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTL 162
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 185 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 243
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 244 QKESTLHLVLRL 255
>gi|440792566|gb|ELR13775.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
Length = 153
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VKQ+I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|29612653|gb|AAH49473.1| Zgc:172187 protein [Danio rerio]
Length = 480
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 83/152 (54%), Gaps = 4/152 (2%)
Query: 33 SILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRD 91
++ IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + D
Sbjct: 22 TMQIFVKTLAGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSD 80
Query: 92 YGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKN 151
Y + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 81 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQ 138
Query: 152 QELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R ++D + E+ +HL++R
Sbjct: 139 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 170
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 177 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 235
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 236 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 293
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 294 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 322
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 329 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 387
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 388 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 445
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 446 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 474
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 405 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 463
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 464 QKESTLHLVLRL 475
>gi|92790184|emb|CAI83761.1| Polyubiqutin 2 [Epidinium ecaudatum]
Length = 322
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 13/209 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 20 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 78
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 79 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 136
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATE 205
I G++LED R + D + E+ +HL++R ++ K + D E S IE +
Sbjct: 137 IFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTFTGKTITLDVEPSDTIENVK 196
Query: 206 LNEKGADVVGEHQFETLFMGYQIRERKLL 234
+ + + Q +F G Q+ + + L
Sbjct: 197 AKIQDKEGIPPDQQRLIFAGKQLEDNRTL 225
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 3/142 (2%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY + + LH
Sbjct: 179 GKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNIQKESTLH 237
Query: 102 LVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEEL 161
LVLRL I V T+ GK VE + VK +I K E + Q LI G++L
Sbjct: 238 LVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQL 295
Query: 162 EDQRLITDICKRNEAVIHLLVR 183
ED R + D + E+ +HL++R
Sbjct: 296 EDNRTLADYNIQKESTLHLVLR 317
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 98 NVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICD 157
+ LHLVLRL I V T+ GK VE + VK +I K E + Q LI
Sbjct: 6 STLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFA 63
Query: 158 GEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATELNE 208
G++LED R + D + E+ +HL++R ++ K + D E S IE +
Sbjct: 64 GKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKI 123
Query: 209 KGADVVGEHQFETLFMGYQIRERKLL 234
+ + + Q +F G Q+ + + L
Sbjct: 124 QDKEGIPPDQQRLIFAGKQLEDNRTL 149
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 248 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 306
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 307 QKESTLHLVLRL 318
>gi|70993888|ref|XP_751791.1| polyubiquitin UbiD/Ubi4 [Aspergillus fumigatus Af293]
gi|66849425|gb|EAL89753.1| polyubiquitin UbiD/Ubi4, putative [Aspergillus fumigatus Af293]
gi|159125290|gb|EDP50407.1| polyubiquitin UbiD/Ubi4, putative [Aspergillus fumigatus A1163]
Length = 314
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 80/150 (53%), Gaps = 3/150 (2%)
Query: 34 ILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYG 93
I + ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY
Sbjct: 87 ITVVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYN 145
Query: 94 LADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQE 153
+ + LHLVLRL I V T+ GK VE + VK +I K E + Q
Sbjct: 146 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQR 203
Query: 154 LICDGEELEDQRLITDICKRNEAVIHLLVR 183
LI G++LED R ++D + E+ +HL++R
Sbjct: 204 LIFAGKQLEDGRTLSDYNIQKESTLHLVLR 233
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 164 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 222
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 223 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 280
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 281 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 309
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 13/158 (8%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRL---------SDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGRE 145
+ LHLVLRL +D V T+ GK VE + VK +I K E
Sbjct: 62 QKESTLHLVLRLRGGMQIWSPADSLITVVKTLTGKTITLEVESSDTIDNVKSKIQDK--E 119
Query: 146 FVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
+ Q LI G++LED R ++D + E+ +HL++R
Sbjct: 120 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 157
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 240 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 298
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 299 QKESTLHLVLRL 310
>gi|1107481|emb|CAA60629.1| unnamed protein product [Acanthamoeba sp. 4b3]
Length = 172
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VKQ+I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVE 127
+ LHLVLRL I V T+ GK VE
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 170
>gi|425774856|gb|EKV13151.1| hypothetical protein PDIG_39650 [Penicillium digitatum PHI26]
Length = 309
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 77/144 (53%), Gaps = 3/144 (2%)
Query: 40 VGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNV 99
V G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 12 VTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKEST 70
Query: 100 LHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGE 159
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G+
Sbjct: 71 LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGK 128
Query: 160 ELEDQRLITDICKRNEAVIHLLVR 183
+LED R ++D + E+ +HL++R
Sbjct: 129 QLEDGRTLSDYNIQKESTLHLVLR 152
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 159 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 217
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 218 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 275
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 276 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 304
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 235 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 293
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 294 QKESTLHLVLRL 305
>gi|224065086|ref|XP_002301663.1| predicted protein [Populus trichocarpa]
gi|222843389|gb|EEE80936.1| predicted protein [Populus trichocarpa]
Length = 305
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L S + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL-EDGSTLADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|578551|emb|CAA80337.1| ubiquitin [Tetrahymena pyriformis]
Length = 379
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 84/149 (56%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G + + V ++DS+ ++K +IQ G +Q+L+F G++L + + + DY +
Sbjct: 3 IFVKTLTGKTVTLDVAQTDSVENIKQKIQDKEGIPPDQQRLIFAGKQLEDART-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK V+ N+ VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVDSSDNIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R I+D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTISDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 34 ILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDY 92
I +F+ ++ G I + V +D+I VK +IQ G +Q+L+F G++L + V DY
Sbjct: 153 IYLFVKTLTGKTITLDVEYNDTIEKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-VSDY 211
Query: 93 GLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQ 152
L + LHLVLRL + + T+ GK V+ N+ VK +I K E + Q
Sbjct: 212 NLQKDSTLHLVLRLRGGMQVFIKTLTGKTITLDVDSSENIENVKAKIQDK--EGIPPDQQ 269
Query: 153 ELICDGEELEDQRLITDICKRNEAVIHLLVR 183
LI G++LED R ++D + E+ +HL++R
Sbjct: 270 RLIFAGKQLEDGRTVSDYNIQKESTLHLVLR 300
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V S++I +VK +IQ G +Q+L+F G++L + V DY + +
Sbjct: 235 TLTGKTITLDVDSSENIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-VSDYNIQKES 293
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK V N+ VK +I K E + Q LI G
Sbjct: 294 TLHLVLRLRGGMQIFVKTLTGKTITLDVNSTDNIENVKAKIQDK--EGIPPDQQRLIFAG 351
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D E+ +HL++R
Sbjct: 352 KQLEDGRSLSDYNISKESTLHLVLR 376
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D+I +VK +IQ G +Q+L+F G++L S + DY +
Sbjct: 307 IFVKTLTGKTITLDVNSTDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRS-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ + LHLVLRL
Sbjct: 366 SKESTLHLVLRL 377
>gi|167519655|ref|XP_001744167.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777253|gb|EDQ90870.1| predicted protein [Monosiga brevicollis MX1]
Length = 153
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 7 TLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 65
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE ++ VK +I K E + Q LI G
Sbjct: 66 TLHLVLRLRGGMQIFVKTLSGKTITLEVEPSDSIENVKAKIQDK--EGIPPDQQRLIFAG 123
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D + E+ +HL++R
Sbjct: 124 KQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 83 TLSGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 141
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 142 TLHLVLRL 149
>gi|299470074|emb|CBN79251.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 380
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 230 IFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 288
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VKQ+I K E + Q L
Sbjct: 289 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDK--EGIPPDQQRL 346
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 347 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 375
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 92/189 (48%), Gaps = 17/189 (8%)
Query: 10 PVLEESLNFPGNFTHRPEKLSNDSIL-IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNG 67
P ++ L F G LS+ +I IF+ ++ G I + V SD+I VK +IQ G
Sbjct: 37 PPDQQRLIFAGKQLEDGRTLSDYNIQKIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEG 96
Query: 68 FFVKKQKLVFEGRELARSNS-------------RVRDYGLADGNVLHLVLRLSDLQAITV 114
+Q+L+F G++L + + DY + + LHLVLRL I V
Sbjct: 97 IPPDQQRLIFAGKQLEDGRTLSDYNIQKLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 156
Query: 115 TTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRN 174
T+ GK VE + VKQ+I K E + Q LI G++LED R ++D +
Sbjct: 157 KTLTGKTITLDVEPSDTIDGVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 214
Query: 175 EAVIHLLVR 183
E+ +HL++R
Sbjct: 215 ESTLHLVLR 223
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 77/163 (47%), Gaps = 33/163 (20%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I VK +IQ G +Q+L+F G++L + L
Sbjct: 3 IFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT------L 56
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+D N+ Q I V T+ GK VE + VKQ+I K E + Q L
Sbjct: 57 SDYNI----------QKIFVKTLTGKTITLDVEPSDTIDGVKQKIQDK--EGIPPDQQRL 104
Query: 155 ICDGEELEDQRLITD--ICK------------RNEAVIHLLVR 183
I G++LED R ++D I K + E+ +HL++R
Sbjct: 105 IFAGKQLEDGRTLSDYNIQKLEDGRTLSDYNIQKESTLHLVLR 147
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 306 IFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 364
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 365 QKESTLHLVLRL 376
>gi|239788925|dbj|BAH71115.1| ACYPI006410 [Acyrthosiphon pisum]
Length = 230
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKEFTLHLVLR 224
>gi|225733991|pdb|2ZVN|A Chain A, Nemo Cozi Domain Incomplex With Diubiquitin In P212121
Space Group
gi|225733992|pdb|2ZVN|G Chain G, Nemo Cozi Domain Incomplex With Diubiquitin In P212121
Space Group
gi|225733995|pdb|2ZVN|C Chain C, Nemo Cozi Domain Incomplex With Diubiquitin In P212121
Space Group
gi|225733996|pdb|2ZVN|E Chain E, Nemo Cozi Domain Incomplex With Diubiquitin In P212121
Space Group
gi|225733999|pdb|2ZVO|A Chain A, Nemo Cozi Domain In Complex With Diubiquitin In C2 Space
Group
gi|225734000|pdb|2ZVO|G Chain G, Nemo Cozi Domain In Complex With Diubiquitin In C2 Space
Group
gi|374074071|pdb|3AXC|A Chain A, Crystal Structure Of Linear Diubiquitin
Length = 154
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 83/152 (54%), Gaps = 4/152 (2%)
Query: 33 SILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRD 91
S+ IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + D
Sbjct: 2 SMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSD 60
Query: 92 YGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKN 151
Y + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 61 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQ 118
Query: 152 QELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R ++D + E+ +HL++R
Sbjct: 119 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 150
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 81 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 139
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 140 QKESTLHLVLRL 151
>gi|297805150|ref|XP_002870459.1| polyubiquitin [Arabidopsis lyrata subsp. lyrata]
gi|297316295|gb|EFH46718.1| polyubiquitin [Arabidopsis lyrata subsp. lyrata]
Length = 537
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 82 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRT-LADYNI 140
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 141 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIEDK--EGIPTDQQRL 198
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 199 IFAGKQLEDGRTLADYNIQKESTLHLVLR 227
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 386 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 444
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 445 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIVPDQQRL 502
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 503 IFAGKQLEDGRTLADYNIQKESTLHLVLR 531
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I ++K +IQ G +Q+L+F G++L + + DY +
Sbjct: 234 IFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 292
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ G+ VE + VK +I K E + Q L
Sbjct: 293 QKESTLHLVLRLRGGMQIFVKTLTGRTITLEVESSDTIDNVKAKIQDK--EEIPADQQRL 350
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 351 IFAGKQLEDGRTLADYNIQKESTLHLVLR 379
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ +Q+L+F G++L + + DY +
Sbjct: 310 IFVKTLTGRTITLEVESSDTIDNVKAKIQDKEEIPADQQRLIFAGKQLEDGRT-LADYNI 368
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 369 QKESTLHLVLRLCGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 426
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 427 IFAGKQLEDGRTLADYNIQKESTLHLVLR 455
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 3/140 (2%)
Query: 44 VIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLV 103
I + S +I +VK +IQ G + +Q+L+F G++L + + DY + ++LHL
Sbjct: 15 TITLDAESSYTINNVKAQIQDKEGIPLDQQRLIFAGKQLEDGRT-LADYNIQKESILHLA 73
Query: 104 LRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELED 163
LRL I V T+ GK VE + VK +I K E + Q LI G++LED
Sbjct: 74 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGILPDQQRLIFAGKQLED 131
Query: 164 QRLITDICKRNEAVIHLLVR 183
R + D + E+ +HL++R
Sbjct: 132 GRTLADYNIQKESTLHLVLR 151
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 462 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIVPDQQRLIFAGKQLEDGRT-LADYNI 520
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 521 QKESTLHLVLRL 532
>gi|195491528|ref|XP_002093599.1| GE18016 [Drosophila yakuba]
gi|194179700|gb|EDW93311.1| GE18016 [Drosophila yakuba]
Length = 317
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 84/157 (53%), Gaps = 4/157 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVRAK 191
I G++LED R ++D + E+ +HL++R + + +
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLRXXXRSKTR 308
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|54610299|gb|AAV35212.1| polyubiquitin-like protein [Schistosoma japonicum]
Length = 156
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 84/154 (54%), Gaps = 4/154 (2%)
Query: 31 NDSILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRV 89
++ + IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + +
Sbjct: 1 HERMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-L 59
Query: 90 RDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDL 149
DY + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 60 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPP 117
Query: 150 KNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R ++D + EA +HL++R
Sbjct: 118 DQQRLIFAGKQLEDGRTLSDYNIQKEATLHLVLR 151
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 82 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 140
Query: 95 ADGNVLHLVLRL 106
LHLVLRL
Sbjct: 141 QKEATLHLVLRL 152
>gi|124784704|gb|ABN14989.1| polyubiquitin [Taenia asiatica]
Length = 200
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 81/151 (53%), Gaps = 3/151 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 49 TLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 107
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE ++ VK +I K E + Q LI G
Sbjct: 108 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDK--EGIPPDQQRLIFAG 165
Query: 159 EELEDQRLITDICKRNEAVIHLLVRKSAKVR 189
++LED R ++D + E+ +HL++R +R
Sbjct: 166 KQLEDGRTLSDYNIQKESTLHLVLRLRGGMR 196
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Query: 72 KQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRN 131
+Q+L+F G++L + + DY + + LHLVLRL I V T+ GK VE +
Sbjct: 6 QQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDS 64
Query: 132 VGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
+ VK +I K E + Q LI G++LED R ++D + E+ +HL++R
Sbjct: 65 IENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 114
>gi|82568440|dbj|BAE48510.1| polyubiquitin [Raphidiophrys contractilis]
Length = 173
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 77/142 (54%), Gaps = 3/142 (2%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY + + LH
Sbjct: 3 GKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLH 61
Query: 102 LVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEEL 161
LVLRL I V T+ GK VE ++ VK +I K E + Q LI G++L
Sbjct: 62 LVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQL 119
Query: 162 EDQRLITDICKRNEAVIHLLVR 183
ED R ++D + E+ +HL++R
Sbjct: 120 EDGRTLSDYNIQKESTLHLVLR 141
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 72 IFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 130
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVK 136
+ LHLVLRL I V T+ GK VE ++ VK
Sbjct: 131 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVK 172
>gi|298710587|emb|CBJ32017.1| similar to ubiquitin [Ectocarpus siliculosus]
Length = 609
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 13/211 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VKQ+I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVSIEATELN 207
I G++LED R ++D + E+ +HL++R ++ K + D E S +
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVK 179
Query: 208 EKGADVVG--EHQFETLFMGYQIRERKLLQN 236
+K D G Q +F G Q+ + + L +
Sbjct: 180 QKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 210
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 13/211 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VKQ+I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVSIEATELN 207
I G++LED R ++D + E+ +HL++R ++ K + D E S +
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVK 407
Query: 208 EKGADVVG--EHQFETLFMGYQIRERKLLQN 236
+K D G Q +F G Q+ + + L +
Sbjct: 408 QKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 438
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VKQ+I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 594 QKESTLHLVLRL 605
>gi|67523087|ref|XP_659604.1| hypothetical protein AN2000.2 [Aspergillus nidulans FGSC A4]
gi|40744745|gb|EAA63901.1| hypothetical protein AN2000.2 [Aspergillus nidulans FGSC A4]
Length = 323
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 83/153 (54%), Gaps = 4/153 (2%)
Query: 32 DSILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVR 90
D + IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + +
Sbjct: 17 DIMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LS 75
Query: 91 DYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLK 150
DY + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 76 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPD 133
Query: 151 NQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R ++D + E+ +HL++R
Sbjct: 134 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 166
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 97 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 155
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 156 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 213
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 214 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 242
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 173 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 231
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 232 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 289
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 290 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 318
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 249 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 307
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 308 QKESTLHLVLRL 319
>gi|167945|gb|AAA33266.1| ubiquitin [Dictyostelium discoideum]
Length = 229
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 83/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G+ I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGNTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE N+ VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE N+ VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|198424689|ref|XP_002119546.1| PREDICTED: similar to ubiquitin isoform 2 [Ciona intestinalis]
gi|198424691|ref|XP_002119309.1| PREDICTED: similar to ubiquitin isoform 1 [Ciona intestinalis]
Length = 229
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDSIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEASDSIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEASDSIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|302393784|sp|P69315.2|UBIQP_LINUS RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Contains: RecName: Full=Ubiquitin-related; Flags:
Precursor
gi|168304|gb|AAA33401.1| ubiquitin, partial [Linum usitatissimum]
Length = 305
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IFL ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 44 IFLKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 102
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 103 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 160
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 161 IFAGKQLEDGRTLADYNIQKESTLHLVLR 189
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
Query: 72 KQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRN 131
+Q+L+F G++L + + DY + + LHLVLRL I + T+ GK VE
Sbjct: 5 QQRLIFAGKQLEDGRT-LADYNIQKESTLHLVLRLRGGMQIFLKTLTGKTITLEVESSDT 63
Query: 132 VGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
+ VK +I K E + Q LI G++LED R + D + E+ +HL++R
Sbjct: 64 IDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 113
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 196 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 254
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK 142
+ LHLVLRL I V T+ GK VE + VK +I K
Sbjct: 255 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK 302
>gi|302393783|sp|P59669.2|UBIQP_GEOCY RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Contains: RecName: Full=Ubiquitin-related; Flags:
Precursor
gi|11154|emb|CAA50268.1| ubiquitin [Geodia cydonium]
Length = 457
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL+VR
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVVR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|358370809|dbj|GAA87419.1| polyubiquitin [Aspergillus kawachii IFO 4308]
Length = 305
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKNKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKNKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|425780946|gb|EKV18932.1| hypothetical protein PDIP_25190 [Penicillium digitatum Pd1]
Length = 233
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 77/144 (53%), Gaps = 3/144 (2%)
Query: 40 VGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNV 99
V G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 12 VTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKEST 70
Query: 100 LHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGE 159
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G+
Sbjct: 71 LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGK 128
Query: 160 ELEDQRLITDICKRNEAVIHLLVR 183
+LED R ++D + E+ +HL++R
Sbjct: 129 QLEDGRTLSDYNIQKESTLHLVLR 152
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 83 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 141
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 142 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 199
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 200 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 228
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 159 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 217
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 218 QKESTLHLVLRL 229
>gi|3047318|gb|AAC13691.1| poly-ubiquitin [Magnaporthe grisea]
Length = 379
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 91/172 (52%), Gaps = 5/172 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKETTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVRAKPVQ-KDFEVSIEATE 205
I G++LED R ++D + E+ +HL++R ++ K + K + +E+++
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLRGGMQIFVKTLTGKTITLEVESSD 247
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 229 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 287
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 288 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 345
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 346 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 374
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKETTLHLVLR 148
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 305 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 363
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 364 QKESTLHLVLRL 375
>gi|226469792|emb|CAX76726.1| polyubiquitin [Schistosoma japonicum]
Length = 228
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTISLEVEPSDTIENVKAKIPDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +I G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTISLEVEPSDTIENVKAKIPDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|15217655|ref|NP_176627.1| protein kinase-like protein [Arabidopsis thaliana]
gi|38603884|gb|AAR24687.1| At1g64460 [Arabidopsis thaliana]
gi|332196122|gb|AEE34243.1| protein kinase-like protein [Arabidopsis thaliana]
Length = 301
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 49/62 (79%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHLDD 324
G+ER LTP+ IG +MCR+T+ +S IE+IVREA ++VLP +SE FLE+V+ MDR LD+
Sbjct: 239 GVERNLTPYQIGSVMCRETVNKDSAIEEIVREAHNSVLPASSEATFLEAVSVAMDRRLDE 298
Query: 325 LT 326
LT
Sbjct: 299 LT 300
>gi|324509924|gb|ADY44155.1| Polyubiquitin-A, partial [Ascaris suum]
Length = 626
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 84/155 (54%), Gaps = 4/155 (2%)
Query: 30 SNDSILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSR 88
S S+ IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L +
Sbjct: 14 STISMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT- 72
Query: 89 VRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVD 148
+ DY + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 73 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIP 130
Query: 149 LKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R ++D + E+ +HL++R
Sbjct: 131 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 165
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 172 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 230
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 231 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 288
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 289 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 317
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 324 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 382
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 383 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 440
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 441 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 469
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 476 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 534
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 535 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 592
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 593 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 621
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 552 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 610
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 611 QKESTLHLVLRL 622
>gi|259487366|tpe|CBF85986.1| TPA: Polyubiquitin Fragment [Source:UniProtKB/TrEMBL;Acc:A2RVC1]
[Aspergillus nidulans FGSC A4]
Length = 305
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|66812158|ref|XP_640258.1| hypothetical protein DDB_G0282295 [Dictyostelium discoideum AX4]
gi|302595958|sp|P0CG76.1|UBIQA_DICDI RecName: Full=Polyubiquitin-A; Contains: RecName: Full=Ubiquitin;
Contains: RecName: Full=Ubiquitin-related 1; Flags:
Precursor
gi|167937|gb|AAA33262.1| ubiquitin [Dictyostelium discoideum]
gi|167951|gb|AAA33269.1| ubiquitin [Dictyostelium discoideum]
gi|60468260|gb|EAL66269.1| hypothetical protein DDB_G0282295 [Dictyostelium discoideum AX4]
Length = 381
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEGSDNIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE N+ VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE N+ VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE N+ VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKTKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEGSDNIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|162461367|ref|NP_001105376.1| polyubiquitin [Zea mays]
gi|899608|gb|AAC49025.1| polyubiquitin [Zea mays]
Length = 381
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL+VR
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVVR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLV+RL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVVRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|145524136|ref|XP_001447898.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415426|emb|CAK80501.1| unnamed protein product [Paramecium tetraurelia]
Length = 637
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 114/234 (48%), Gaps = 16/234 (6%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 347 TLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 405
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 406 TLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDK--EGIPPDQQRLIFAG 463
Query: 159 EELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATELNEK 209
++LED R ++D + E+ +HL++R ++ K + D E S I+A + +
Sbjct: 464 KQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQ 523
Query: 210 GADVVGEHQFETLFMGYQIRERKLLQNDLLLEPLIVESNFKLPLMIKRLISSTV 263
+ + Q +F G +++ K + + L E +E +L + +K L T+
Sbjct: 524 DKEGIPPDQQRLIFAG-KLQHLKGIHSPLSFE---IERWLRLQIFVKTLTGKTI 573
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 77/145 (53%), Gaps = 2/145 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 123 TLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 181
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + ++ + +E + Q LI G
Sbjct: 182 TLHLVLRLRGGMQIFVKTLTGKTITLDVEPSSTL-LTLSRLQIQDKEGIPPDQQRLIFAG 240
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D + E+ +HL++R
Sbjct: 241 KQLEDGRTLSDYNIQKESTLHLVLR 265
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 70/145 (48%), Gaps = 12/145 (8%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +QK F +Y + +
Sbjct: 56 TLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQKTHF----------LQENYNIQKES 105
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 106 TLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDK--EGIPPDQQRLIFAG 163
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D + E+ +HL++R
Sbjct: 164 KQLEDGRTLSDYNIQKESTLHLVLR 188
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 21/150 (14%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G+ L
Sbjct: 499 TLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGK-------------LQHLK 545
Query: 99 VLHLVL-----RLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQE 153
+H L R LQ I V T+ GK VE + VK +I K E + Q
Sbjct: 546 GIHSPLSFEIERWLRLQ-IFVKTLTGKTITLDVEPSDTIDAVKAKIQDK--EGIPPDQQR 602
Query: 154 LICDGEELEDQRLITDICKRNEAVIHLLVR 183
LI G++LED R ++D + E+ +HL++R
Sbjct: 603 LIFAGKQLEDGRTLSDYNIQKESTLHLVLR 632
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 39 SVGGSVIPMRVMESDSIASV-KLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADG 97
++ G I + V S ++ ++ +L+IQ G +Q+L+F G++L + + DY +
Sbjct: 199 TLTGKTITLDVEPSSTLLTLSRLQIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKE 257
Query: 98 NVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK 142
+ LHLVLRL I V T+ GK VE + VK +I K
Sbjct: 258 STLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDK 302
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 567 TLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 625
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 626 TLHLVLRL 633
>gi|167935|gb|AAA33261.1| ubiquitin, partial [Dictyostelium discoideum]
Length = 381
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEGSDNIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE N+ VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE N+ VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE N+ VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKTKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLFDYNIQKESTLHLVLR 376
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEGSDNIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LFDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|66804955|ref|XP_636210.1| hypothetical protein DDB_G0289449 [Dictyostelium discoideum AX4]
gi|302595960|sp|P0CG78.1|UBIQF_DICDI RecName: Full=Polyubiquitin-F; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|167947|gb|AAA33267.1| ubiquitin [Dictyostelium discoideum]
gi|60464567|gb|EAL62704.1| hypothetical protein DDB_G0289449 [Dictyostelium discoideum AX4]
Length = 533
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE N+ VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE N+ VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE N+ VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE N+ VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 518 QKESTLHLVLRL 529
>gi|343485975|dbj|BAK61744.1| ubiquitin [Collozoum amoeboides]
Length = 228
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 13/211 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I++VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVSIEATELN 207
I G++LED R + D + E+ +HL++R ++ K + D E S + +
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVK 179
Query: 208 EKGADVVG--EHQFETLFMGYQIRERKLLQN 236
K D G Q +F G Q+ + + L +
Sbjct: 180 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 210
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I++VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I++VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|339233016|ref|XP_003381625.1| ubiquitin family protein [Trichinella spiralis]
gi|316979538|gb|EFV62321.1| ubiquitin family protein [Trichinella spiralis]
Length = 258
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 3/162 (1%)
Query: 22 FTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRE 81
+ H ++ + ++ G I + V SD+I +VK +IQ G +Q+L+F G++
Sbjct: 22 YVHLSNRIHRKMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQ 81
Query: 82 LARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAK 141
L + + DY + + LHLVLRL I V T+ GK VE + VK +I
Sbjct: 82 LEDGRT-LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQD 140
Query: 142 KGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
K E + Q LI G++LED R+++D + E+ +HL++R
Sbjct: 141 K--EGIPPDQQRLIFAGKQLEDGRMLSDYNIQKESTLHLVLR 180
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 81/151 (53%), Gaps = 4/151 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + DY +
Sbjct: 111 IFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLE-DGRMLSDYNI 169
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 170 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDK--EGIPPDQQRL 227
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKS 185
I G++LED R ++D + E+ +HL++R S
Sbjct: 228 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLS 258
>gi|66802284|ref|XP_629924.1| hypothetical protein DDB_G0291928 [Dictyostelium discoideum AX4]
gi|66825263|ref|XP_645986.1| hypothetical protein DDB_G0269458 [Dictyostelium discoideum AX4]
gi|302595963|sp|P0CG80.1|UBIQI_DICDI RecName: Full=Polyubiquitin-I; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|302595964|sp|P0CG88.1|UBIQJ_DICDI RecName: Full=Polyubiquitin-J; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|60463302|gb|EAL61494.1| hypothetical protein DDB_G0291928 [Dictyostelium discoideum AX4]
gi|60474142|gb|EAL72079.1| hypothetical protein DDB_G0269458 [Dictyostelium discoideum AX4]
Length = 305
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE N+ VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE N+ VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|170583349|ref|XP_001896539.1| ubiquitin [Brugia malayi]
gi|158596243|gb|EDP34630.1| ubiquitin, putative [Brugia malayi]
Length = 307
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPADQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE V VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVETSDTVENVKAKIQDK--EGIPPGQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 73/141 (51%), Gaps = 3/141 (2%)
Query: 44 VIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRV-RDYGLADGNVLHL 102
I + V SD+I +VK ++Q G +Q+L+F G+ + R DY + + LHL
Sbjct: 164 TITLEVETSDTIENVKAKVQDKEGIPPDQQRLIFAGKRKQLEDGRTFSDYNIQKESTLHL 223
Query: 103 VLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELE 162
VLRL I V T+ GK VE + VK +I K E + Q LI G++LE
Sbjct: 224 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLE 281
Query: 163 DQRLITDICKRNEAVIHLLVR 183
D R ++D + E+ +HL++R
Sbjct: 282 DGRTLSDYNIQKESTLHLVLR 302
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD++ +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVETSDTVENVKAKIQDKEGIPPGQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ VE + VK ++ K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGLQIFVKTLTSMTITLEVETSDTIENVKAKVQDK--EGIPPDQQRL 195
Query: 155 ICDG--EELEDQRLITDICKRNEAVIHLLVR 183
I G ++LED R +D + E+ +HL++R
Sbjct: 196 IFAGKRKQLEDGRTFSDYNIQKESTLHLVLR 226
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 233 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 291
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 292 QKESTLHLVLRL 303
>gi|9837286|gb|AAG00513.1|AF285162_1 polyubiquitin C [Mus musculus]
Length = 886
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGISPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGISPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 594 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 651
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 652 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 687 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 745
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 746 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 803
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 804 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 832
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEGGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 763 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 821
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQ 138
+ LHLVLRL I V T+ GK VE VKQ+
Sbjct: 822 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVTTKKVKQE 865
>gi|119192382|ref|XP_001246797.1| polyubiquitin [Coccidioides immitis RS]
gi|145258352|ref|XP_001402015.1| ubiquitin [Aspergillus niger CBS 513.88]
gi|258573789|ref|XP_002541076.1| ubiquitin [Uncinocarpus reesii 1704]
gi|296808323|ref|XP_002844500.1| polyubiquitin [Arthroderma otae CBS 113480]
gi|303312875|ref|XP_003066449.1| polyubiquitin, putative [Coccidioides posadasii C735 delta SOWgp]
gi|134074621|emb|CAK44654.1| unnamed protein product [Aspergillus niger]
gi|237901342|gb|EEP75743.1| ubiquitin [Uncinocarpus reesii 1704]
gi|238843983|gb|EEQ33645.1| polyubiquitin [Arthroderma otae CBS 113480]
gi|240106111|gb|EER24304.1| polyubiquitin, putative [Coccidioides posadasii C735 delta SOWgp]
gi|350632449|gb|EHA20817.1| hypothetical protein ASPNIDRAFT_214265 [Aspergillus niger ATCC
1015]
gi|392863964|gb|EJB10724.1| polyubiquitin [Coccidioides immitis RS]
Length = 305
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|402898876|ref|XP_003919464.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-B [Papio anubis]
Length = 305
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRXCMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|124377854|tpd|FAA00317.1| TPA: polyubiquitin [Aspergillus nidulans FGSC A4]
Length = 304
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|194866181|ref|XP_001971796.1| GG14240 [Drosophila erecta]
gi|190653579|gb|EDV50822.1| GG14240 [Drosophila erecta]
Length = 991
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 84/156 (53%), Gaps = 4/156 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 839 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 897
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 898 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 955
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVRA 190
I G++LED R ++D + E+ +HL++R ++A
Sbjct: 956 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQA 991
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 670 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 727
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 728 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 763 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 821
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 822 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 879
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 880 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 908
>gi|66811838|ref|XP_640098.1| hypothetical protein DDB_G0282369 [Dictyostelium discoideum AX4]
gi|302595961|sp|P0CG79.1|UBIQG_DICDI RecName: Full=Polyubiquitin-G; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|167949|gb|AAA33268.1| ubiquitin [Dictyostelium discoideum]
gi|60468034|gb|EAL66044.1| hypothetical protein DDB_G0282369 [Dictyostelium discoideum AX4]
Length = 381
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE N+ VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE N+ VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE N+ VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|197129059|gb|ACH45557.1| putative ubiquitin C variant 4 [Taeniopygia guttata]
Length = 190
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGR 144
+ LHLVLRL I V T+ GK VE + + Q +GR
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIEXCQGQDPGQGR 187
>gi|339233010|ref|XP_003381622.1| ubiquitin family protein [Trichinella spiralis]
gi|316979542|gb|EFV62324.1| ubiquitin family protein [Trichinella spiralis]
Length = 277
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDSIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R+++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRMLSDYNIQKESTLHLVLR 148
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 82/155 (52%), Gaps = 4/155 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRMLSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR 189
I G++LED R ++D + E+ +HL++R +R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMR 230
>gi|226477452|emb|CAX72420.1| polyubiquitin [Schistosoma japonicum]
Length = 268
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLGDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK 142
+ LHLVLRL I V T+ GK VE + VK +I K
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK 261
>gi|147861306|emb|CAN83998.1| hypothetical protein VITISV_001390 [Vitis vinifera]
Length = 161
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 48/61 (78%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHLDD 324
G +RGLTPF IG IMCR TL ESVIE+IV+EAQD++LPG SE FLE+++ ++D LD
Sbjct: 99 GAQRGLTPFVIGSIMCRVTLNKESVIEEIVQEAQDSLLPGMSEAAFLETISQLIDTRLDK 158
Query: 325 L 325
L
Sbjct: 159 L 159
>gi|89891990|gb|ABD78847.1| ubiquitin C II [Anser anser]
Length = 271
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK 142
+ LHLVLRL I V T+ GK VE + VK +I K
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK 261
>gi|226473052|emb|CAX71212.1| polyubiquitin [Schistosoma japonicum]
Length = 304
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLCFRGGMQIFVKTLTGKTITLEVEPSDPIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D E+ + L++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIPKESTLPLVLR 300
Score = 43.9 bits (102), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDPIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ L LVLRL
Sbjct: 290 PKESTLPLVLRL 301
>gi|357148706|ref|XP_003574865.1| PREDICTED: polyubiquitin-like [Brachypodium distachyon]
Length = 341
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 39 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 97
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 98 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 155
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 156 IFAGKQLEDGRTLADYNIQKESTLHLVLR 184
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 191 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 249
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 250 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 307
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 308 IFAGKQLEDGRTLADYNIQKESTLHLVLR 336
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 267 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 325
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 326 QKESTLHLVLRL 337
>gi|195587566|ref|XP_002083532.1| GD13313 [Drosophila simulans]
gi|194195541|gb|EDX09117.1| GD13313 [Drosophila simulans]
Length = 195
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK 142
+ LHLVLRL I V T+ GK VE + VK +I K
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK 185
>gi|194944118|ref|XP_001983129.1| GG19855 [Drosophila erecta]
gi|190647611|gb|EDV45009.1| GG19855 [Drosophila erecta]
Length = 328
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 61 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 119
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 120 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 177
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 178 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 206
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 137 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 195
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 196 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 253
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 254 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 282
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 72/132 (54%), Gaps = 3/132 (2%)
Query: 52 SDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQA 111
SD+I +VK +IQ G +Q+L+F G++L + + DY + + LHLVLRL
Sbjct: 2 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQ 60
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R ++D
Sbjct: 61 IFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYN 118
Query: 172 KRNEAVIHLLVR 183
+ E+ +HL++R
Sbjct: 119 IQKESTLHLVLR 130
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 213 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 271
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQI 139
+ LHLVLRL I V T+ GK VE + VK +I
Sbjct: 272 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 316
>gi|32400969|gb|AAP80690.1| polyubiquitin [Griffithsia japonica]
Length = 195
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 49 TLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 107
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 108 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDK--EGIPPDQQRLIFAG 165
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D + E+ +HL++R
Sbjct: 166 KQLEDGRTLSDYNIQKESTLHLVLR 190
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 125 TLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 183
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 184 TLHLVLRL 191
>gi|66807485|ref|XP_637465.1| hypothetical protein DDB_G0286907 [Dictyostelium discoideum AX4]
gi|302595959|sp|P0CG77.1|UBIQD_DICDI RecName: Full=Polyubiquitin-D; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|167943|gb|AAA33265.1| ubiquitin [Dictyostelium discoideum]
gi|167953|gb|AAA33270.1| ubiquitin [Dictyostelium discoideum]
gi|60465881|gb|EAL63951.1| hypothetical protein DDB_G0286907 [Dictyostelium discoideum AX4]
Length = 229
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE N+ VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE N+ VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|307110244|gb|EFN58480.1| hypothetical protein CHLNCDRAFT_48528 [Chlorella variabilis]
Length = 229
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 92/174 (52%), Gaps = 7/174 (4%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLL--VRKSAKVRAKPVQ-KDFEVSIEATE 205
+ G++LED R + D + E+ +HL+ +R ++ K + K+ E+ IE T+
Sbjct: 120 VFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMMIKVKTLTGKEIEIDIEPTD 173
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+LVF G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLVFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK E +E V +K+++ +K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMMIKVKTLTGKEIEIDIEPTDTVQRIKERVEEK--EGIPPVQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G+ + D ++ D +V+HL++
Sbjct: 196 IFAGKAMNDDKMAKDYNIEGGSVLHLVL 223
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + + +D++ +K R++ G +Q+L+F G+ + + +DY + G+
Sbjct: 159 TLTGKEIEIDIEPTDTVQRIKERVEEKEGIPPVQQRLIFAGKAM-NDDKMAKDYNIEGGS 217
Query: 99 VLHLVLRL 106
VLHLVL L
Sbjct: 218 VLHLVLAL 225
>gi|347968153|ref|XP_312337.4| AGAP002599-PA [Anopheles gambiae str. PEST]
gi|333468138|gb|EAA08053.5| AGAP002599-PA [Anopheles gambiae str. PEST]
Length = 305
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESPLHLVLR 300
>gi|402483942|gb|AFQ60003.1| polyubiquitin, partial [Solen grandis]
Length = 275
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 69 IFVKTLTGKTITLEVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 127
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 128 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIENVKAKIQDK--EGIPPDQQRL 185
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G+ LED R ++D + E+ +HL++R
Sbjct: 186 IFAGKHLEDGRTLSDYNIQKESTLHLVLR 214
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 76/140 (54%), Gaps = 3/140 (2%)
Query: 44 VIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLV 103
I + V SDSI +VK +IQ G +Q+L+F G++L + + DY + + LHLV
Sbjct: 2 TITLEVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLV 60
Query: 104 LRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELED 163
LRL I V T+ GK VE ++ VK +I K E + Q LI G++LED
Sbjct: 61 LRLRGGMQIFVKTLTGKTITLEVEASDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLED 118
Query: 164 QRLITDICKRNEAVIHLLVR 183
R ++D + E+ +HL++R
Sbjct: 119 GRTLSDYNIQKESTLHLVLR 138
>gi|260600300|gb|ACX46987.1| ubiquitin [Guzmania wittmackii x Guzmania lingulata]
Length = 441
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G ++Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPEQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 68/129 (52%), Gaps = 4/129 (3%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELED 163
I G++LED
Sbjct: 424 IFAGKQLED 432
>gi|197129049|gb|ACH45547.1| putative ubiquitin C variant 1 [Taeniopygia guttata]
Length = 209
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 4/127 (3%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEEL 161
I G++L
Sbjct: 196 IFAGKQL 202
>gi|66814762|ref|XP_641560.1| hypothetical protein DDB_G0279721 [Dictyostelium discoideum AX4]
gi|302595962|sp|P0CG81.1|UBIQH_DICDI RecName: Full=Polyubiquitin-H; Contains: RecName: Full=Ubiquitin;
Contains: RecName: Full=Ubiquitin-like
gi|60469646|gb|EAL67635.1| hypothetical protein DDB_G0279721 [Dictyostelium discoideum AX4]
Length = 381
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE N+ VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE N+ VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE N+ VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVECSDNIENVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVECSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|62911180|gb|AAX56917.1| polyubiquitin [Gracilaria lemaneiformis]
Length = 457
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTPHLVLR 452
>gi|9837284|gb|AAG00512.1|AF285161_1 polyubiquitin C [Mus musculus]
Length = 734
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGISPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGISPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 594 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 651
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 652 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQ 138
+ LHLVLRL I V T+ GK VE VKQ+
Sbjct: 670 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVTTKKVKQE 713
>gi|341879718|gb|EGT35653.1| hypothetical protein CAEBREN_32771 [Caenorhabditis brenneri]
Length = 970
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 85/155 (54%), Gaps = 5/155 (3%)
Query: 31 NDSIL-IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSR 88
D+I+ IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L +
Sbjct: 53 TDAIMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT- 111
Query: 89 VRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVD 148
+ DY + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 112 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIP 169
Query: 149 LKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R ++D + E+ +HL++R
Sbjct: 170 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 204
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 211 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 269
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 270 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 327
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 328 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 356
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 363 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 421
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 422 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 479
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 480 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 508
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 515 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 573
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 574 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 631
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 632 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 660
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 667 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 725
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 726 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 783
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 784 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 812
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 819 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 877
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 878 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 935
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 936 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 964
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 895 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 953
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 954 QKESTLHLVLRL 965
>gi|209738556|gb|ACI70147.1| Ubiquitin [Salmo salar]
Length = 381
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|124359683|gb|ABD32351.2| Ubiquitin [Medicago truncatula]
Length = 538
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 33 SILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRD 91
S+ IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + D
Sbjct: 5 SMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LAD 63
Query: 92 YGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKN 151
Y + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 64 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQ 121
Query: 152 QELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R + D + E+ +HL++R
Sbjct: 122 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 153
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 160 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 218
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 219 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 276
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 277 IFAGKQLEDGRTLADYNIQKESTLHLVLR 305
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 388 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 446
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 447 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 504
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 505 IFAGKQLEDGRTLADYNIQKESTLHLVLR 533
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +I G +Q+L+F G++L + + DY +
Sbjct: 312 IFVKTLTGKTITLEVESSDTIDNVKAKILDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 370
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 371 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 428
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 429 IFAGKQLEDGRTLADYNIQKESTLHLVLR 457
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 464 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 522
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 523 QKESTLHLVLRL 534
>gi|393218664|gb|EJD04152.1| polyubiquitin [Fomitiporia mediterranea MF3/22]
Length = 321
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDTVKNKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDTVKNKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 78/146 (53%), Gaps = 4/146 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDTVKNKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDTVKNKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHL 180
I G++LED R ++D + E+ +HL
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHL 297
>gi|297808451|ref|XP_002872109.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297317946|gb|EFH48368.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 383
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G + +Q+L+F G++L + + DY +
Sbjct: 4 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPLDQQRLIFAGKQLEDGRT-LADYNI 62
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 63 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 120
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 121 IFAGKQLEDGRTLADYNIQKESTLHLVLR 149
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 232 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 290
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E V Q L
Sbjct: 291 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGVPPDQQRL 348
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 349 IFAGKQLEDGRTLADYNIQKESTLHLVLR 377
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 156 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 214
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 215 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 272
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 273 IFAGKQLEDGRTLADYNIQKESTLHLVLR 301
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 308 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLEDGRT-LADYNI 366
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 367 QKESTLHLVLRL 378
>gi|302496049|ref|XP_003010029.1| polyubiquitin UbiD/Ubi4, putative [Arthroderma benhamiae CBS
112371]
gi|315043104|ref|XP_003170928.1| ubiquitin [Arthroderma gypseum CBS 118893]
gi|327295188|ref|XP_003232289.1| polyubiquitin [Trichophyton rubrum CBS 118892]
gi|291173564|gb|EFE29389.1| polyubiquitin UbiD/Ubi4, putative [Arthroderma benhamiae CBS
112371]
gi|311344717|gb|EFR03920.1| ubiquitin [Arthroderma gypseum CBS 118893]
gi|326465461|gb|EGD90914.1| polyubiquitin [Trichophyton rubrum CBS 118892]
gi|326473983|gb|EGD97992.1| polyubiquitin [Trichophyton tonsurans CBS 112818]
gi|326480982|gb|EGE04992.1| ubiquitin [Trichophyton equinum CBS 127.97]
Length = 229
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|223646966|gb|ACN10241.1| Ubiquitin [Salmo salar]
gi|223672829|gb|ACN12596.1| Ubiquitin [Salmo salar]
Length = 305
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 77/149 (51%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q +
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPGQQRM 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++ E+ ++D + E+ +HL R
Sbjct: 272 IFAGKQPEEGGPLSDYNIQKESTLHLFRR 300
>gi|443713356|gb|ELU06246.1| hypothetical protein CAPTEDRAFT_186294 [Capitella teleta]
Length = 231
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 80/150 (53%), Gaps = 4/150 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRK 184
I G++LED R ++D + E+ +HL R+
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLCQRQ 225
>gi|353238378|emb|CCA70326.1| related to UBI4-Ubiquitin [Piriformospora indica DSM 11827]
Length = 222
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 72 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 130
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 131 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 188
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 189 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 217
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Query: 44 VIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLV 103
I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + + LHLV
Sbjct: 5 TITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLV 63
Query: 104 LRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELED 163
LRL I V T+ GK VE + VK +I K E + Q LI G++LED
Sbjct: 64 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLED 121
Query: 164 QRLITDICKRNEAVIHLLVR 183
R ++D + E+ +HL++R
Sbjct: 122 GRTLSDYNIQKESTLHLVLR 141
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 148 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 206
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 207 QKESTLHLVLRL 218
>gi|440482103|gb|ELQ62622.1| RING finger protein [Magnaporthe oryzae P131]
Length = 1056
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|226499354|ref|NP_001147027.1| polyubiquitin containing 7 ubiquitin monomers [Zea mays]
gi|195606596|gb|ACG25128.1| polyubiquitin containing 7 ubiquitin monomers [Zea mays]
Length = 311
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 82/159 (51%), Gaps = 4/159 (2%)
Query: 26 PEKLSNDSILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELAR 84
P + IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L
Sbjct: 75 PRSPRRSKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 134
Query: 85 SNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGR 144
+ + DY + + LHLVLRL I V T+ GK VE + VK +I K
Sbjct: 135 GRT-LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK-- 191
Query: 145 EFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
E + Q LI G++LED R + D + E+ +HL++R
Sbjct: 192 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 230
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 161 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 219
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 220 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 277
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 278 IFAGKQLEDGRTLADYNIQKESTLHLVLR 306
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRNLIFSPFA 62
Query: 95 ADGNVLHLVL------RLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVD 148
+ + + R S +Q I V T+ GK VE + VK +I K E +
Sbjct: 63 RNAHTARSPISDPRSPRRSKMQ-IFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIP 119
Query: 149 LKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R + D + E+ +HL++R
Sbjct: 120 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 154
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 237 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 295
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 296 QKESTLHLVLRL 307
>gi|16552475|dbj|BAB71316.1| unnamed protein product [Homo sapiens]
Length = 388
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 125 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 183
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 184 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 241
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 242 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 270
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 72/132 (54%), Gaps = 3/132 (2%)
Query: 52 SDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQA 111
SD+I +VK +IQ G +Q+L+F G++L + + DY + + LHLVLRL
Sbjct: 66 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQ 124
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R ++D
Sbjct: 125 IFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYN 182
Query: 172 KRNEAVIHLLVR 183
+ E+ +HL++R
Sbjct: 183 IQKESTLHLVLR 194
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 4/145 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 201 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 259
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 260 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 317
Query: 155 ICDGEELEDQRLITDICKRNEAVIH 179
I G++LED R ++D + +A I
Sbjct: 318 IFAGKQLEDGRTLSDTIENVKAKIQ 342
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 52 SDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRL 106
SD+I +VK +IQ G +Q+L+F G++L + + DY + + LHLVLRL
Sbjct: 331 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRL 384
>gi|340504493|gb|EGR30931.1| ubiquitin family protein, putative [Ichthyophthirius multifiliis]
Length = 329
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 105/211 (49%), Gaps = 13/211 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 27 IFVKTLTGKTITLDVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 85
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 86 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDSIENVKAKIQDK--EGIPPDQQRL 143
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEV--SIEATE 205
I G++LED R ++D + E+ +HL++R ++ K + D E SIE +
Sbjct: 144 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDSIENVK 203
Query: 206 LNEKGADVVGEHQFETLFMGYQIRERKLLQN 236
+ + + Q +F G Q+ + + L +
Sbjct: 204 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 234
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 179 IFVKTLTGKTITLDVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 237
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 238 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDSIENVKAKIQDK--EGIPPDQQRL 295
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 296 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 324
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 255 IFVKTLTGKTITLDVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 313
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 314 QKESTLHLVLRL 325
>gi|396492504|ref|XP_003843815.1| hypothetical protein LEMA_P014660.1 [Leptosphaeria maculans JN3]
gi|312220395|emb|CBY00336.1| hypothetical protein LEMA_P014660.1 [Leptosphaeria maculans JN3]
Length = 395
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 24 HRPEKLSND-----SILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVF 77
H P ++ N + IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F
Sbjct: 76 HPPTQVFNTLYTRAKMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIF 135
Query: 78 EGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQ 137
G++L + + DY + + LHLVLRL I V T+ GK VE + VK
Sbjct: 136 AGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 194
Query: 138 QIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
+I K E + Q LI G++LED R ++D + E+ +HL++R
Sbjct: 195 KIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 238
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 245 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 303
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 304 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 361
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 362 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 390
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 321 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 379
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 380 QKESTLHLVLRL 391
>gi|309252551|gb|ADO60140.1| ubiquitin [Beauveria bassiana]
Length = 215
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|104303708|gb|ABF66639.1| ubiquitin [Pelophylax nigromaculatus]
Length = 305
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|374073976|pdb|2Y5B|B Chain B, Structure Of Usp21 In Complex With Linear
Diubiquitin-Aldehyde
gi|374073978|pdb|2Y5B|F Chain F, Structure Of Usp21 In Complex With Linear
Diubiquitin-Aldehyde
Length = 152
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGHMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|343485991|dbj|BAK61751.1| ubiquitin [Sphaerozoum punctatum]
Length = 228
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I++VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 13/211 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I++V+ +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVESSDTISNVEAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVSIEATELN 207
I G++LED R + D + E+ +HL++R ++ K + D E S + +
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVK 179
Query: 208 EKGADVVG--EHQFETLFMGYQIRERKLLQN 236
K D G Q +F G Q+ + + L +
Sbjct: 180 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 210
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I++VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|346986300|ref|NP_001231307.1| polyubiquitin [Cricetulus griseus]
gi|2627133|dbj|BAA23488.1| polyubiquitin [Cricetulus griseus]
Length = 1038
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNVQKESTLHLVLR 604
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 670 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 727
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 728 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 763 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 821
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 822 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 879
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 880 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 908
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 5/113 (4%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 915 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 973
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFV 147
+ LHLVLRL I V T+ GK VE + KQ+ GR F+
Sbjct: 974 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSNTIKKSKQE---DGRTFL 1023
>gi|33323472|gb|AAQ07453.1| ubiquitin [Musa acuminata AAA Group]
Length = 381
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I ++V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLKVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLKVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|571519|gb|AAA75310.1| polyubiquitin [Gracilaria gracilis]
gi|1095488|prf||2109223A poly-ubiquitin
Length = 457
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ K VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTAKTITLEVESSDTIENVKTKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTAKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|395328003|gb|EJF60398.1| polyubiquitin [Dichomitus squalens LYAD-421 SS1]
Length = 305
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRP-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|223646766|gb|ACN10141.1| Ubiquitin [Salmo salar]
gi|223649344|gb|ACN11430.1| Ubiquitin [Salmo salar]
gi|223672621|gb|ACN12492.1| Ubiquitin [Salmo salar]
Length = 457
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|321263887|ref|XP_003196661.1| ATP-dependent protein binding protein [Cryptococcus gattii WM276]
gi|317463138|gb|ADV24874.1| ATP-dependent protein binding protein, putative [Cryptococcus
gattii WM276]
Length = 381
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|226469794|emb|CAX76727.1| polyubiquitin [Schistosoma japonicum]
gi|226473062|emb|CAX71217.1| polyubiquitin [Schistosoma japonicum]
gi|226473066|emb|CAX71219.1| polyubiquitin [Schistosoma japonicum]
Length = 304
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|62089150|dbj|BAD93019.1| ubiquitin C variant [Homo sapiens]
Length = 1309
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 83/152 (54%), Gaps = 4/152 (2%)
Query: 33 SILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRD 91
++ IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + D
Sbjct: 16 TMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSD 74
Query: 92 YGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKN 151
Y + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 75 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQ 132
Query: 152 QELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R ++D + E+ +HL++R
Sbjct: 133 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 164
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 171 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 229
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 230 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 287
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 288 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 316
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 323 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 381
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 382 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 439
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 440 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 468
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 475 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 533
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 534 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 591
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 592 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 620
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 627 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 685
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 686 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 743
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 744 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 772
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 779 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 837
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 838 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 895
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 896 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 924
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 931 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 989
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 990 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 1047
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 1048 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 1076
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 1083 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 1141
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 1142 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 1199
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 1200 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 1228
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 1159 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 1217
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 1218 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 1275
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 1276 IFAGKQLENGRTLSDYNIQKESTLHLVLR 1304
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 1235 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLENGRT-LSDYNI 1293
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 1294 QKESTLHLVLRL 1305
>gi|140083661|gb|ABO84843.1| ubiquitin B [Sus scrofa]
Length = 209
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|4105408|gb|AAD02414.1| polyubiquitin [Schistosoma mansoni]
Length = 295
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 146 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 204
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 205 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 262
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 263 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 291
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 76/142 (53%), Gaps = 3/142 (2%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + + LH
Sbjct: 1 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLH 59
Query: 102 LVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEEL 161
LVLRL I V T+ GK VE + VK +I K E + Q LI G++L
Sbjct: 60 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQL 117
Query: 162 EDQRLITDICKRNEAVIHLLVR 183
ED R ++D + E+ +HL++R
Sbjct: 118 EDGRTLSDYNIQKESTLHLVLR 139
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 222 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 280
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 281 QKESTLHLVLRL 292
>gi|18256864|gb|AAH21837.1| Ubc protein [Mus musculus]
Length = 658
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQ 138
+ LHLVLRL I V T+ GK VE VKQ+
Sbjct: 594 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVTTKKVKQE 637
>gi|226477468|emb|CAX72428.1| ubiquitin C [Schistosoma japonicum]
Length = 229
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|4589760|dbj|BAA76889.1| ubiquitin [Trichophyton mentagrophytes]
gi|6539532|dbj|BAA88168.1| ubiquitin [Arthroderma otae]
Length = 153
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|444434919|dbj|BAM77034.1| ubiquitin C [Homo sapiens]
Length = 533
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKAITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK ++ K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKVQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK ++Q G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKVQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 518 QKESTLHLVLRL 529
>gi|308512652|gb|ADO32981.1| polyubiquitin [Eriocheir sinensis]
gi|325556934|gb|ADZ28743.1| ubiquitin C [Eriocheir sinensis]
Length = 305
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|226484872|emb|CAX79713.1| ubiquitin C [Schistosoma japonicum]
Length = 305
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q +
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRM 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+++F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRMIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|226473058|emb|CAX71215.1| ubiquitin C [Schistosoma japonicum]
Length = 456
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLTFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|443688720|gb|ELT91320.1| hypothetical protein CAPTEDRAFT_162204 [Capitella teleta]
Length = 457
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|154275270|ref|XP_001538486.1| polyubiquitin [Ajellomyces capsulatus NAm1]
gi|150414926|gb|EDN10288.1| polyubiquitin [Ajellomyces capsulatus NAm1]
Length = 305
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVENSDTIDNVKSKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVENSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVESADTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|185135461|ref|NP_001117778.1| polyubiquitin [Oncorhynchus mykiss]
gi|157110833|ref|XP_001651266.1| ubiquitin [Aedes aegypti]
gi|13991678|gb|AAK51460.1|AF361365_1 polyubiquitin [Oncorhynchus mykiss]
gi|108883867|gb|EAT48092.1| AAEL000795-PA [Aedes aegypti]
gi|209149518|gb|ACI32978.1| Ubiquitin [Salmo salar]
gi|209737152|gb|ACI69445.1| Ubiquitin [Salmo salar]
Length = 305
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|170097832|ref|XP_001880135.1| ubiquitin [Laccaria bicolor S238N-H82]
gi|395056|emb|CAA80851.1| ubiquitin [Phanerochaete chrysosporium]
gi|164644573|gb|EDR08822.1| ubiquitin [Laccaria bicolor S238N-H82]
gi|389741436|gb|EIM82624.1| ubiquitin [Stereum hirsutum FP-91666 SS1]
Length = 381
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|449266037|gb|EMC77164.1| Ubiquitin, partial [Columba livia]
Length = 290
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITD 169
I G++LED R ++D
Sbjct: 272 IFAGKQLEDGRTLSD 286
>gi|302680697|ref|XP_003030030.1| polyubiquitin [Schizophyllum commune H4-8]
gi|2739333|gb|AAB94630.1| polyubiquitin [Schizophyllum commune]
gi|300103721|gb|EFI95127.1| polyubiquitin [Schizophyllum commune H4-8]
gi|328770661|gb|EGF80702.1| polyubiquitin [Batrachochytrium dendrobatidis JAM81]
gi|409044635|gb|EKM54116.1| hypothetical protein PHACADRAFT_257732 [Phanerochaete carnosa
HHB-10118-sp]
Length = 305
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|49586|emb|CAA30815.1| unnamed protein product [Cricetulus sp.]
Length = 223
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G++LED R ++D + E+ +HL++
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVL 223
>gi|270010560|gb|EFA07008.1| hypothetical protein TcasGA2_TC009978 [Tribolium castaneum]
Length = 685
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 594 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 651
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 652 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 670 QKESTLHLVLRL 681
>gi|195125345|ref|XP_002007139.1| GI12770 [Drosophila mojavensis]
gi|193918748|gb|EDW17615.1| GI12770 [Drosophila mojavensis]
Length = 991
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 670 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 727
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 728 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 763 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 821
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 822 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 879
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 880 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 908
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 839 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 897
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 898 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 955
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 956 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 984
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 915 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 973
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 974 QKESTLHLVLRL 985
>gi|158256510|dbj|BAF84228.1| unnamed protein product [Homo sapiens]
Length = 609
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSATIENVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V S +I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSATIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 594 QKESTLHLVLRL 605
>gi|93359417|gb|ABF13286.1| polyubiquitin [Anser anser]
Length = 265
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVK 136
+ HLVLRL I V T+ GK VE + VK
Sbjct: 214 QKESTPHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 255
>gi|56754831|gb|AAW25598.1| unknown [Schistosoma japonicum]
Length = 381
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIHDK--EGIPPDQQRS 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +I G +Q+ +F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIHDKEGIPPDQQRSIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|307006571|gb|ADN23570.1| ubiquitin [Hyalomma marginatum rufipes]
Length = 275
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 49 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 107
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 108 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 165
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 166 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 194
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 125 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 183
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 184 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 241
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 242 IFAGKQLEDGRTLPDYNIQKESTLHLVLR 270
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 63 QSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVF 122
Q G +Q+L+F G++L + + DY + + LHLVLRL I V T+ GK
Sbjct: 1 QDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 59
Query: 123 EFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLV 182
VE + VK +I K E + Q LI G++LED R ++D + E+ +HL++
Sbjct: 60 TLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 117
Query: 183 R 183
R
Sbjct: 118 R 118
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 201 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LPDYNI 259
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 260 QKESTLHLVLRL 271
>gi|195448336|ref|XP_002071613.1| GK10077 [Drosophila willistoni]
gi|194167698|gb|EDW82599.1| GK10077 [Drosophila willistoni]
Length = 610
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 594 QKESTLHLVLRL 605
>gi|195132655|ref|XP_002010758.1| GI21526 [Drosophila mojavensis]
gi|260830119|ref|XP_002610009.1| hypothetical protein BRAFLDRAFT_131116 [Branchiostoma floridae]
gi|193907546|gb|EDW06413.1| GI21526 [Drosophila mojavensis]
gi|229295371|gb|EEN66019.1| hypothetical protein BRAFLDRAFT_131116 [Branchiostoma floridae]
Length = 609
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 594 QKESTLHLVLRL 605
>gi|148237866|ref|NP_001079589.1| Polyubiquitin-C-like [Xenopus laevis]
gi|27924422|gb|AAH45004.1| MGC53081 protein [Xenopus laevis]
gi|226469790|emb|CAX76725.1| ubiquitin C [Schistosoma japonicum]
gi|226473054|emb|CAX71213.1| ubiquitin C [Schistosoma japonicum]
Length = 380
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|58260904|ref|XP_567862.1| ATP-dependent protein binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|134116983|ref|XP_772718.1| hypothetical protein CNBK0920 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255336|gb|EAL18071.1| hypothetical protein CNBK0920 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229943|gb|AAW46345.1| ATP-dependent protein binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 457
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|46359622|dbj|BAD15290.1| polyubiquitin [Crassostrea gigas]
Length = 685
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 594 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 651
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 652 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 670 QKESTLHLVLRL 681
>gi|226473056|emb|CAX71214.1| polyubiquitin [Schistosoma japonicum]
Length = 304
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +I G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIPDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLR I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRFRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|194762588|ref|XP_001963416.1| GF20300 [Drosophila ananassae]
gi|190629075|gb|EDV44492.1| GF20300 [Drosophila ananassae]
gi|389610665|dbj|BAM18944.1| ubiquitin [Papilio polytes]
Length = 610
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 594 QKESTLHLVLRL 605
>gi|47682711|gb|AAH69831.1| Zgc:172187 protein [Danio rerio]
gi|62530956|gb|AAH93444.1| Zgc:172187 protein [Danio rerio]
Length = 624
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 83/152 (54%), Gaps = 4/152 (2%)
Query: 33 SILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRD 91
++ IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + D
Sbjct: 14 TMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSD 72
Query: 92 YGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKN 151
Y + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 73 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQ 130
Query: 152 QELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R ++D + E+ +HL++R
Sbjct: 131 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 162
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 169 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 227
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 228 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 285
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 286 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 314
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 321 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 379
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 380 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 437
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 438 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 466
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 473 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 531
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 532 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 589
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 590 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 618
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 549 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 607
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 608 QKESTLHLVLRL 619
>gi|67191208|ref|NP_066289.2| polyubiquitin-C [Homo sapiens]
Length = 685
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPSDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 594 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 651
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 652 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 670 QKESTLHLVLRL 681
>gi|432899994|ref|XP_004076672.1| PREDICTED: polyubiquitin-C-like [Oryzias latipes]
Length = 533
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 518 QKESTLHLVLRL 529
>gi|402220063|gb|EJU00136.1| ubiquitin [Dacryopinax sp. DJM-731 SS1]
Length = 381
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|389742108|gb|EIM83295.1| polyubiquitin [Stereum hirsutum FP-91666 SS1]
gi|449546777|gb|EMD37746.1| polyubiquitin [Ceriporiopsis subvermispora B]
gi|449550837|gb|EMD41801.1| polyubiquitin [Ceriporiopsis subvermispora B]
Length = 457
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|336385317|gb|EGO26464.1| hypothetical protein SERLADRAFT_368035 [Serpula lacrymans var.
lacrymans S7.9]
gi|392571572|gb|EIW64744.1| ubiquitin [Trametes versicolor FP-101664 SS1]
gi|395334250|gb|EJF66626.1| ubiquitin [Dichomitus squalens LYAD-421 SS1]
gi|403414247|emb|CCM00947.1| predicted protein [Fibroporia radiculosa]
Length = 381
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|347966903|ref|XP_550846.3| AGAP001971-PA [Anopheles gambiae str. PEST]
gi|333469848|gb|EAL38503.3| AGAP001971-PA [Anopheles gambiae str. PEST]
Length = 1065
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 670 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 727
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 728 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 763 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 821
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 822 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 879
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 880 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 908
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 915 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 973
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 974 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 1031
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 1032 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 1060
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 991 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 1049
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 1050 QKESTLHLVLRL 1061
>gi|242021992|ref|XP_002431426.1| ubiquitin, putative [Pediculus humanus corporis]
gi|212516707|gb|EEB18688.1| ubiquitin, putative [Pediculus humanus corporis]
Length = 844
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 84/157 (53%), Gaps = 4/157 (2%)
Query: 28 KLSNDSILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSN 86
+L + IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L
Sbjct: 452 RLRGGKMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 511
Query: 87 SRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREF 146
+ + DY + + LHLVLRL I V T+ GK VE + VK +I K E
Sbjct: 512 T-LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EG 568
Query: 147 VDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
+ Q LI G++LED R ++D + E+ +HL++R
Sbjct: 569 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 605
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 612 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 670
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 671 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 728
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 729 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 757
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 688 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 746
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 747 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 804
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 805 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 833
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 764 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 822
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 823 QKESTLHLVLRL 834
>gi|195042539|ref|XP_001991451.1| GH12661 [Drosophila grimshawi]
gi|193901209|gb|EDW00076.1| GH12661 [Drosophila grimshawi]
Length = 699
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 75/142 (52%), Gaps = 4/142 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEA 176
I G++LED R ++D + E+
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKES 597
>gi|170034793|ref|XP_001845257.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167876387|gb|EDS39770.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1065
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 670 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 727
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 728 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 763 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 821
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 822 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 879
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 880 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 908
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 915 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 973
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 974 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 1031
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 1032 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 1060
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 991 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 1049
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 1050 QKESTLHLVLRL 1061
>gi|156358687|ref|XP_001624647.1| predicted protein [Nematostella vectensis]
gi|170055263|ref|XP_001863505.1| polyubiquitin [Culex quinquefasciatus]
gi|156211440|gb|EDO32547.1| predicted protein [Nematostella vectensis]
gi|167875249|gb|EDS38632.1| polyubiquitin [Culex quinquefasciatus]
Length = 533
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 518 QKESTLHLVLRL 529
>gi|56753927|gb|AAW25156.1| SJCHGC00176 protein [Schistosoma japonicum]
Length = 457
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|8394502|ref|NP_059010.1| polyubiquitin-C precursor [Rattus norvegicus]
gi|81872124|sp|Q63429.1|UBC_RAT RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
Contains: RecName: Full=Ubiquitin-related; Flags:
Precursor
gi|471154|dbj|BAA04129.1| polyubiquitin [Rattus norvegicus]
Length = 810
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 670 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 727
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 728 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 687 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 745
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQ 138
+ LHLVLRL I V T+ GK VE N VKQ+
Sbjct: 746 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSVNTKKVKQE 789
>gi|2627131|dbj|BAA23487.1| polyubiquitin [Cricetulus griseus]
Length = 886
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 670 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 727
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 728 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 5/113 (4%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 763 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 821
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFV 147
+ LHLVLRL I V T+ GK VE + KQ+ GR F+
Sbjct: 822 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSNTIKKSKQE---DGRTFL 871
>gi|405123351|gb|AFR98116.1| polyubiquitin [Cryptococcus neoformans var. grubii H99]
Length = 381
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|340374850|ref|XP_003385950.1| PREDICTED: polyubiquitin-like [Amphimedon queenslandica]
Length = 381
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|323714263|ref|NP_001071272.2| ubuquitin c [Danio rerio]
Length = 533
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 518 QKESTLHLVLRL 529
>gi|254585537|ref|XP_002498336.1| ZYRO0G07854p [Zygosaccharomyces rouxii]
gi|238941230|emb|CAR29403.1| ZYRO0G07854p [Zygosaccharomyces rouxii]
Length = 460
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|195164963|ref|XP_002023315.1| GL20284 [Drosophila persimilis]
gi|194105420|gb|EDW27463.1| GL20284 [Drosophila persimilis]
Length = 382
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|157671923|ref|NP_062613.3| polyubiquitin-C [Mus musculus]
gi|342187094|sp|P0CG50.2|UBC_MOUSE RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
Contains: RecName: Full=Ubiquitin-related 1; Contains:
RecName: Full=Ubiquitin-related 2; Flags: Precursor
Length = 734
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQ 138
+ LHLVLRL I V T+ GK VE VKQ+
Sbjct: 670 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVTTKKVKQE 713
>gi|157138587|ref|XP_001664266.1| ubiquitin [Aedes aegypti]
gi|108880554|gb|EAT44779.1| AAEL003877-PA [Aedes aegypti]
Length = 761
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 670 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 727
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 728 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 687 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 745
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 746 QKESTLHLVLRL 757
>gi|157138589|ref|XP_001664267.1| ubiquitin [Aedes aegypti]
gi|241694258|ref|XP_002402192.1| ubiquitin/40S ribosomal protein S27A fusion, putative [Ixodes
scapularis]
gi|108880555|gb|EAT44780.1| AAEL003877-PB [Aedes aegypti]
gi|215504684|gb|EEC14178.1| ubiquitin/40S ribosomal protein S27A fusion, putative [Ixodes
scapularis]
Length = 609
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 594 QKESTLHLVLRL 605
>gi|51873890|gb|AAH80583.1| Unknown (protein for IMAGE:2822684), partial [Homo sapiens]
Length = 698
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 83/152 (54%), Gaps = 4/152 (2%)
Query: 33 SILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRD 91
++ IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + D
Sbjct: 13 TMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSD 71
Query: 92 YGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKN 151
Y + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 72 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQ 129
Query: 152 QELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R ++D + E+ +HL++R
Sbjct: 130 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 161
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 168 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 226
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 227 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 284
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 285 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 313
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 320 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 378
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 379 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 436
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 437 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 465
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 472 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 530
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 531 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 588
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 589 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 617
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 548 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 606
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 607 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 664
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 665 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 693
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 624 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 682
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 683 QKESTLHLVLRL 694
>gi|13879398|gb|AAH06680.1| Ubc protein [Mus musculus]
Length = 582
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQ 138
+ LHLVLRL I V T+ GK VE VKQ+
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVTTKKVKQE 561
>gi|208022675|ref|NP_001129078.1| polyubiquitin-C [Pan troglodytes]
gi|302595944|sp|P0CG64.1|UBC_PANTR RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|302595946|sp|P0CG61.1|UBC_PONPY RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|28316338|dbj|BAC56952.1| polyubiquitin C [Pan troglodytes]
gi|28316342|dbj|BAC56954.1| polyubiquitin C [Pongo pygmaeus]
Length = 761
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 670 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 727
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 728 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 687 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 745
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 746 QKESTLHLVLRL 757
>gi|576773|gb|AAA82978.1| polyubiquitin [Cryptococcus neoformans var. grubii]
Length = 381
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|6755919|ref|NP_035794.1| polyubiquitin-B [Mus musculus]
gi|20302085|ref|NP_620250.1| polyubiquitin-B precursor [Rattus norvegicus]
gi|147904884|ref|NP_001090433.1| uncharacterized protein LOC779345 [Xenopus laevis]
gi|302595873|sp|P0CG62.1|UBB_CHICK RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|302595876|sp|P0CG49.1|UBB_MOUSE RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|302595879|sp|P0CG51.1|UBB_RAT RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|2118966|pir||I50437 polyubiquitin 4 - chicken
gi|55118|emb|CAA35999.1| ubiquitin [Mus musculus]
gi|212849|gb|AAA49128.1| ubiquitin I [Gallus gallus]
gi|471156|dbj|BAA03983.1| polyubiquitin [Rattus norvegicus]
gi|12840717|dbj|BAB24930.1| unnamed protein product [Mus musculus]
gi|12845838|dbj|BAB26919.1| unnamed protein product [Mus musculus]
gi|12846202|dbj|BAB27071.1| unnamed protein product [Mus musculus]
gi|12850137|dbj|BAB28606.1| unnamed protein product [Mus musculus]
gi|37805416|gb|AAH60312.1| Ubiquitin B [Rattus norvegicus]
gi|47477820|gb|AAH70919.1| Ubiquitin B [Rattus norvegicus]
gi|71682472|gb|AAI00342.1| Ubiquitin B [Mus musculus]
gi|74210110|dbj|BAE21330.1| unnamed protein product [Mus musculus]
gi|89891988|gb|ABD78846.1| ubiquitin C I [Anser anser]
gi|116487680|gb|AAI26016.1| MGC154789 protein [Xenopus laevis]
gi|148678404|gb|EDL10351.1| mCG23377, isoform CRA_a [Mus musculus]
gi|197693972|gb|ACH71654.1| ubiquitin C [Columba livia]
Length = 305
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|346986309|ref|NP_001231310.1| polyubiquitin [Cricetulus griseus]
gi|2118958|pir||S21083 polyubiquitin 5 - Chinese hamster
gi|49477|emb|CAA42941.1| polyubiquitin [Cricetulus griseus]
gi|25991946|gb|AAN76999.1| poly-ubiquitin [Biomphalaria glabrata]
Length = 381
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|410914740|ref|XP_003970845.1| PREDICTED: polyubiquitin-B-like isoform 1 [Takifugu rubripes]
gi|410914742|ref|XP_003970846.1| PREDICTED: polyubiquitin-B-like isoform 2 [Takifugu rubripes]
gi|221222312|gb|ACM09817.1| Ubiquitin [Salmo salar]
gi|334362439|gb|AEG78418.1| Ubiquitin C variant 2 [Epinephelus coioides]
Length = 305
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|195399337|ref|XP_002058277.1| GJ16000 [Drosophila virilis]
gi|194150701|gb|EDW66385.1| GJ16000 [Drosophila virilis]
Length = 457
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|1304128|dbj|BAA09860.1| polyubiquitin [Homo sapiens]
Length = 611
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK E + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEGEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEGEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 594 QKESTLHLVLRL 605
>gi|154312178|ref|XP_001555417.1| polyubiquitin [Botryotinia fuckeliana B05.10]
gi|171682222|ref|XP_001906054.1| hypothetical protein [Podospora anserina S mat+]
gi|3091264|gb|AAC15225.1| polyubiquitin [Botryotinia fuckeliana]
gi|170941070|emb|CAP66720.1| unnamed protein product [Podospora anserina S mat+]
gi|345566606|gb|EGX49548.1| hypothetical protein AOL_s00078g37 [Arthrobotrys oligospora ATCC
24927]
gi|347836850|emb|CCD51422.1| similar to polyubiquitin protein [Botryotinia fuckeliana]
gi|393248123|gb|EJD55630.1| ubiquitin [Auricularia delicata TFB-10046 SS5]
gi|409051494|gb|EKM60970.1| hypothetical protein PHACADRAFT_247222 [Phanerochaete carnosa
HHB-10118-sp]
Length = 305
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|336372502|gb|EGO00841.1| hypothetical protein SERLA73DRAFT_121253 [Serpula lacrymans var.
lacrymans S7.3]
Length = 371
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 145 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 203
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 204 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 261
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 262 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 290
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 221 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 279
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 280 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 337
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 338 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 366
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQH- 118
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
R ++D + E+ +HL++R
Sbjct: 119 ---------GRTLSDYNIQKESTLHLVLR 138
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 297 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 355
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 356 QKESTLHLVLRL 367
>gi|223646702|gb|ACN10109.1| Ubiquitin [Salmo salar]
gi|223672553|gb|ACN12458.1| Ubiquitin [Salmo salar]
Length = 305
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|195587564|ref|XP_002083531.1| GD13314 [Drosophila simulans]
gi|194195540|gb|EDX09116.1| GD13314 [Drosophila simulans]
Length = 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK 142
+ LHLVLRL I V T+ GK VE + VK +I K
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK 261
>gi|156064327|ref|XP_001598085.1| polyubiquitin [Sclerotinia sclerotiorum 1980]
gi|154691033|gb|EDN90771.1| polyubiquitin [Sclerotinia sclerotiorum 1980 UF-70]
Length = 305
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLLDYNIQKESTLHLVLR 300
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLL-DYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|213982779|ref|NP_001135561.1| uncharacterized protein LOC100216108 [Xenopus (Silurana)
tropicalis]
gi|126323857|ref|XP_001366753.1| PREDICTED: polyubiquitin [Monodelphis domestica]
gi|332254371|ref|XP_003276301.1| PREDICTED: polyubiquitin-C isoform 1 [Nomascus leucogenys]
gi|332254373|ref|XP_003276302.1| PREDICTED: polyubiquitin-C isoform 2 [Nomascus leucogenys]
gi|332254377|ref|XP_003276304.1| PREDICTED: polyubiquitin-C isoform 4 [Nomascus leucogenys]
gi|332254379|ref|XP_003276305.1| PREDICTED: polyubiquitin-C isoform 5 [Nomascus leucogenys]
gi|441630332|ref|XP_004089532.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
gi|441630335|ref|XP_004089533.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
gi|441630338|ref|XP_004089534.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
gi|441630344|ref|XP_004089536.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
gi|441630354|ref|XP_004089537.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
gi|441630357|ref|XP_004089538.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
gi|441630362|ref|XP_004089539.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
gi|441630365|ref|XP_004089540.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
gi|119618869|gb|EAW98463.1| ubiquitin C, isoform CRA_a [Homo sapiens]
gi|119618870|gb|EAW98464.1| ubiquitin C, isoform CRA_a [Homo sapiens]
gi|119618871|gb|EAW98465.1| ubiquitin C, isoform CRA_a [Homo sapiens]
gi|119618872|gb|EAW98466.1| ubiquitin C, isoform CRA_a [Homo sapiens]
gi|195539774|gb|AAI68051.1| Unknown (protein for MGC:185560) [Xenopus (Silurana) tropicalis]
gi|444434915|dbj|BAM77032.1| ubiquitin C [Homo sapiens]
Length = 533
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 518 QKESTLHLVLRL 529
>gi|16191634|emb|CAC94926.1| putative ubiquitin [Pleurotus sp. 'Florida']
Length = 243
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 60 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 118
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 119 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 176
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 177 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 205
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 72/132 (54%), Gaps = 3/132 (2%)
Query: 52 SDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQA 111
SD+I +VK +IQ G +Q+L+F G++L + + DY + + LHLVLRL
Sbjct: 1 SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQ 59
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R ++D
Sbjct: 60 IFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYN 117
Query: 172 KRNEAVIHLLVR 183
+ E+ +HL++R
Sbjct: 118 IQKESTLHLVLR 129
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 136 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 194
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVK 136
+ LHLVLRL I V T+ GK VE + VK
Sbjct: 195 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 236
>gi|440473707|gb|ELQ42489.1| RING finger protein [Magnaporthe oryzae Y34]
Length = 1058
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|169844322|ref|XP_001828882.1| ubiquitin C [Coprinopsis cinerea okayama7#130]
gi|170084089|ref|XP_001873268.1| ubiquitin [Laccaria bicolor S238N-H82]
gi|302695715|ref|XP_003037536.1| hypothetical protein SCHCODRAFT_64979 [Schizophyllum commune H4-8]
gi|116509994|gb|EAU92889.1| ubiquitin C [Coprinopsis cinerea okayama7#130]
gi|164650820|gb|EDR15060.1| ubiquitin [Laccaria bicolor S238N-H82]
gi|300111233|gb|EFJ02634.1| hypothetical protein SCHCODRAFT_64979 [Schizophyllum commune H4-8]
gi|336385372|gb|EGO26519.1| hypothetical protein SERLADRAFT_385284 [Serpula lacrymans var.
lacrymans S7.9]
gi|390604125|gb|EIN13516.1| ubiquitin [Punctularia strigosozonata HHB-11173 SS5]
gi|409083376|gb|EKM83733.1| hypothetical protein AGABI1DRAFT_81473 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426201575|gb|EKV51498.1| ubiquitin [Agaricus bisporus var. bisporus H97]
gi|443894847|dbj|GAC72194.1| ubiquitin and ubiquitin-like proteins [Pseudozyma antarctica T-34]
Length = 305
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|74214198|dbj|BAE40351.1| unnamed protein product [Mus musculus]
Length = 278
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQ 138
+ LHLVLRL I V T+ GK VE VKQ+
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVTTKKVKQE 257
>gi|73995130|ref|XP_853060.1| PREDICTED: polyubiquitin-C isoform 2 [Canis lupus familiaris]
gi|149633339|ref|XP_001509120.1| PREDICTED: polyubiquitin-C [Ornithorhynchus anatinus]
gi|194214411|ref|XP_001499132.2| PREDICTED: polyubiquitin [Equus caballus]
gi|297263837|ref|XP_002798872.1| PREDICTED: hypothetical protein LOC712934 isoform 3 [Macaca
mulatta]
gi|344297276|ref|XP_003420325.1| PREDICTED: polyubiquitin-C-like [Loxodonta africana]
gi|345791301|ref|XP_003433478.1| PREDICTED: polyubiquitin-C isoform 1 [Canis lupus familiaris]
gi|390468353|ref|XP_003733926.1| PREDICTED: polyubiquitin-C-like [Callithrix jacchus]
gi|343958420|dbj|BAK63065.1| ubiquitin [Pan troglodytes]
gi|343959062|dbj|BAK63386.1| ubiquitin [Pan troglodytes]
gi|431912123|gb|ELK14261.1| Ubiquitin [Pteropus alecto]
Length = 381
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|21428336|gb|AAM49828.1| GH17513p [Drosophila melanogaster]
Length = 306
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|444434921|dbj|BAM77035.1| ubiquitin C [Homo sapiens]
Length = 685
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 594 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 651
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 652 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRS 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 670 QKESTLHLVLRL 681
>gi|302393782|sp|P23324.2|UBIQP_EUPEU RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|159038|gb|AAA62225.1| ubiquitin [Euplotes eurystomus]
Length = 229
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE+ + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE+ + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|405978203|gb|EKC42613.1| Ubiquitin [Crassostrea gigas]
Length = 222
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 72 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 130
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 131 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 188
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 189 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 217
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 76/142 (53%), Gaps = 3/142 (2%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + + LH
Sbjct: 3 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLH 61
Query: 102 LVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEEL 161
LVLRL I V T+ GK VE + VK +I K E + Q LI G++L
Sbjct: 62 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQL 119
Query: 162 EDQRLITDICKRNEAVIHLLVR 183
ED R ++D + E+ +HL++R
Sbjct: 120 EDGRTLSDYNIQKESTLHLVLR 141
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 148 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 206
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 207 QKESTLHLVLRL 218
>gi|395536358|ref|XP_003770187.1| PREDICTED: polyubiquitin-B [Sarcophilus harrisii]
Length = 305
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDXXXLSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|357611679|gb|EHJ67605.1| Ubc protein [Danaus plexippus]
Length = 381
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|226477448|emb|CAX72418.1| ubiquitin C [Schistosoma japonicum]
gi|226484005|emb|CAX79671.1| ubiquitin C [Schistosoma japonicum]
Length = 381
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|197129051|gb|ACH45549.1| putative ubiquitin C variant 1 [Taeniopygia guttata]
Length = 305
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGISPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E +HL+VR
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKELTLHLVVR 300
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGISPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
LHLV+RL
Sbjct: 290 QKELTLHLVVRL 301
>gi|194749344|ref|XP_001957099.1| GF10254 [Drosophila ananassae]
gi|190624381|gb|EDV39905.1| GF10254 [Drosophila ananassae]
Length = 837
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 670 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 727
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 728 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 687 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 745
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 746 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 803
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 804 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 832
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 763 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 821
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 822 QKESTLHLVLRL 833
>gi|124377858|tpd|FAA00319.1| TPA: polyubiquitin [Cryptococcus neoformans var. neoformans
B-3501A]
Length = 456
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|169847035|ref|XP_001830230.1| ubiquitin [Coprinopsis cinerea okayama7#130]
gi|116508706|gb|EAU91601.1| ubiquitin [Coprinopsis cinerea okayama7#130]
Length = 305
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|625174|gb|AAC84175.1| ubiquitin [Artemia franciscana]
Length = 225
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 62 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 120
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 121 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 178
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 179 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 207
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 72/132 (54%), Gaps = 3/132 (2%)
Query: 52 SDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQA 111
SD+I +VK +IQ G +Q+L+F G++L + + DY + + LHLVLRL
Sbjct: 3 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQ 61
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R ++D
Sbjct: 62 IFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYN 119
Query: 172 KRNEAVIHLLVR 183
+ E+ +HL++R
Sbjct: 120 IQKESTLHLVLR 131
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 138 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 196
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVF 122
+ LHLVLRL T GK F
Sbjct: 197 QKESTLHLVLRLRG-----GTQTSGKTF 219
>gi|406606462|emb|CCH42236.1| ubiquitin C [Wickerhamomyces ciferrii]
Length = 383
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|367029699|ref|XP_003664133.1| hypothetical protein MYCTH_2315548 [Myceliophthora thermophila ATCC
42464]
gi|347011403|gb|AEO58888.1| hypothetical protein MYCTH_2315548 [Myceliophthora thermophila ATCC
42464]
Length = 305
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +DSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESADSIETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESADTIETVKNKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESADTIETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESADTIETVKNKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESADTIETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|321469467|gb|EFX80447.1| hypothetical protein DAPPUDRAFT_243700 [Daphnia pulex]
Length = 764
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 670 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 727
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 728 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 687 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 745
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 746 QKESTLHLVLRL 757
>gi|189441656|gb|AAI67447.1| Zgc:172187 protein [Danio rerio]
Length = 458
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|146421245|ref|XP_001486573.1| ubiquitin [Meyerozyma guilliermondii ATCC 6260]
gi|146389988|gb|EDK38146.1| ubiquitin [Meyerozyma guilliermondii ATCC 6260]
Length = 457
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|145046250|ref|NP_001013290.2| ubiquitin [Danio rerio]
Length = 610
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 594 QKESTLHLVLRL 605
>gi|86515356|ref|NP_001034506.1| polyubiquitin [Tribolium castaneum]
gi|21314343|gb|AAM46898.1|AF506022_1 polyubiquitin [Tribolium castaneum]
Length = 685
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 594 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 651
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 652 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRS 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 670 QKESTLHLVLRL 681
>gi|2627129|dbj|BAA23486.1| polyubiquitin [Homo sapiens]
Length = 609
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITXEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 594 QKESTLHLVLRL 605
>gi|302393781|sp|P62976.2|UBIQP_CRIGR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Contains: RecName: Full=Ubiquitin-related 1; Contains:
RecName: Full=Ubiquitin-related 2; Flags: Precursor
gi|940395|dbj|BAA09853.1| polyubiquitin [Cricetulus sp.]
Length = 658
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K + + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--QGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 5/113 (4%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKQGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFV 147
+ LHLVLRL I V T+ GK VE + KQ+ GR F+
Sbjct: 594 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSNTIKKSKQE---DGRTFL 643
>gi|444434925|dbj|BAM77037.1| ubiquitin C [Homo sapiens]
Length = 685
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 594 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 651
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 652 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVELSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+ +F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRT-LSDYSI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 670 QKESTLHLVLRL 681
>gi|55742507|ref|NP_001006688.1| ubiquitin C [Xenopus (Silurana) tropicalis]
gi|297693402|ref|XP_002824008.1| PREDICTED: polyubiquitin-C isoform 1 [Pongo abelii]
gi|297693404|ref|XP_002824009.1| PREDICTED: polyubiquitin-C isoform 2 [Pongo abelii]
gi|297693406|ref|XP_002824010.1| PREDICTED: polyubiquitin-C isoform 3 [Pongo abelii]
gi|297693408|ref|XP_002824011.1| PREDICTED: polyubiquitin-C isoform 4 [Pongo abelii]
gi|297693416|ref|XP_002824015.1| PREDICTED: polyubiquitin-C isoform 8 [Pongo abelii]
gi|297693418|ref|XP_002824016.1| PREDICTED: polyubiquitin-C isoform 9 [Pongo abelii]
gi|297693420|ref|XP_002824017.1| PREDICTED: polyubiquitin-C isoform 10 [Pongo abelii]
gi|395745069|ref|XP_003778208.1| PREDICTED: polyubiquitin-C [Pongo abelii]
gi|302595941|sp|P0CG66.1|UBC_GORGO RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|28316340|dbj|BAC56953.1| polyubiquitin C [Gorilla gorilla]
gi|49257812|gb|AAH74652.1| ubiquitin C [Xenopus (Silurana) tropicalis]
gi|89271842|emb|CAJ82066.1| novel protein [Xenopus (Silurana) tropicalis]
gi|444434923|dbj|BAM77036.1| ubiquitin C [Homo sapiens]
Length = 609
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 594 QKESTLHLVLRL 605
>gi|350537977|ref|NP_001232075.1| putative ubiquitin C variant 2 [Taeniopygia guttata]
gi|197129056|gb|ACH45554.1| putative ubiquitin C variant 2 [Taeniopygia guttata]
Length = 248
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|195011548|ref|XP_001983203.1| GH15714 [Drosophila grimshawi]
gi|193896685|gb|EDV95551.1| GH15714 [Drosophila grimshawi]
Length = 535
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 518 QKESTLHLVLRL 529
>gi|256072199|ref|XP_002572424.1| ubiquitin (ribosomal protein L40) [Schistosoma mansoni]
gi|164510084|emb|CAJ32646.1| ubiquitin [Xantho incisus]
gi|226473060|emb|CAX71216.1| polyubiquitin [Schistosoma japonicum]
Length = 228
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|50423807|ref|XP_460488.1| DEHA2F02816p [Debaryomyces hansenii CBS767]
gi|210076178|ref|XP_504128.2| YALI0E18986p [Yarrowia lipolytica]
gi|49656157|emb|CAG88798.1| DEHA2F02816p [Debaryomyces hansenii CBS767]
gi|199426939|emb|CAG79723.2| YALI0E18986p [Yarrowia lipolytica CLIB122]
gi|392574761|gb|EIW67896.1| hypothetical protein TREMEDRAFT_44902 [Tremella mesenterica DSM
1558]
Length = 457
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|24640086|ref|NP_727078.1| Ubiquitin-5E [Drosophila melanogaster]
gi|194896187|ref|XP_001978429.1| GG17684 [Drosophila erecta]
gi|22831806|gb|AAF46142.3| Ubiquitin-5E [Drosophila melanogaster]
gi|190650078|gb|EDV47356.1| GG17684 [Drosophila erecta]
gi|208879484|gb|ACI31287.1| GH17761p [Drosophila melanogaster]
Length = 534
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 518 QKESTLHLVLRL 529
>gi|115492305|ref|XP_001210780.1| ubiquitin [Aspergillus terreus NIH2624]
gi|149242950|ref|XP_001526489.1| hypothetical protein LELG_03047 [Lodderomyces elongisporus NRRL
YB-4239]
gi|169771599|ref|XP_001820269.1| ubiquitin [Aspergillus oryzae RIB40]
gi|212542037|ref|XP_002151173.1| polyubiquitin UbiD/Ubi4, putative [Talaromyces marneffei ATCC
18224]
gi|238485820|ref|XP_002374148.1| polyubiquitin UbiD/Ubi4, putative [Aspergillus flavus NRRL3357]
gi|242769894|ref|XP_002341866.1| polyubiquitin UbiD/Ubi4, putative [Talaromyces stipitatus ATCC
10500]
gi|448097159|ref|XP_004198602.1| Piso0_001982 [Millerozyma farinosa CBS 7064]
gi|448111178|ref|XP_004201781.1| Piso0_001982 [Millerozyma farinosa CBS 7064]
gi|83768128|dbj|BAE58267.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|114197640|gb|EAU39340.1| ubiquitin [Aspergillus terreus NIH2624]
gi|146450612|gb|EDK44868.1| hypothetical protein LELG_03047 [Lodderomyces elongisporus NRRL
YB-4239]
gi|210066080|gb|EEA20173.1| polyubiquitin UbiD/Ubi4, putative [Talaromyces marneffei ATCC
18224]
gi|218725062|gb|EED24479.1| polyubiquitin UbiD/Ubi4, putative [Talaromyces stipitatus ATCC
10500]
gi|220699027|gb|EED55366.1| polyubiquitin UbiD/Ubi4, putative [Aspergillus flavus NRRL3357]
gi|359380024|emb|CCE82265.1| Piso0_001982 [Millerozyma farinosa CBS 7064]
gi|359464770|emb|CCE88475.1| Piso0_001982 [Millerozyma farinosa CBS 7064]
gi|391871753|gb|EIT80910.1| ubiquitin and ubiquitin-like protein [Aspergillus oryzae 3.042]
Length = 305
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|402224638|gb|EJU04700.1| polyubiquitin UbiD/Ubi4 [Dacryopinax sp. DJM-731 SS1]
Length = 229
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|334324804|ref|XP_001373422.2| PREDICTED: polyubiquitin-C-like [Monodelphis domestica]
Length = 761
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 670 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 727
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 728 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 687 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 745
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 746 QKESTLHLVLRL 757
>gi|302918054|ref|XP_003052575.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733515|gb|EEU46862.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 305
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|239611163|gb|EEQ88150.1| ubiquitin [Ajellomyces dermatitidis ER-3]
Length = 305
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V D+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVESGDTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|510473|emb|CAA52416.1| polyubiquitin [Artemia franciscana]
Length = 697
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 594 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 651
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 652 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K + + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--QGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 670 QKESTLHLVLRL 681
>gi|73955934|ref|XP_536651.2| PREDICTED: polyubiquitin-B isoform 1 [Canis lupus familiaris]
gi|345800303|ref|XP_003434677.1| PREDICTED: polyubiquitin-B [Canis lupus familiaris]
Length = 229
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|392569337|gb|EIW62510.1| ubiquitin 10.1 [Trametes versicolor FP-101664 SS1]
Length = 463
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 81/153 (52%), Gaps = 4/153 (2%)
Query: 32 DSILIFLS-VGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVR 90
DS+ IF+ + G I + V SD+I VK +IQ G +Q+L+F ++L + +
Sbjct: 309 DSMQIFVKWLHGRTITLEVRSSDTIDDVKAKIQEIEGISPDRQRLIFASKQLDDGRT-LS 367
Query: 91 DYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLK 150
DY + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 368 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPD 425
Query: 151 NQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R ++D + E+ +HL++R
Sbjct: 426 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 458
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLS------DLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVD 148
+ LHLVLRL D I V + G+ V + VK +I + E +
Sbjct: 290 QKESTLHLVLRLRGAFRVLDSMQIFVKWLHGRTITLEVRSSDTIDDVKAKIQEI--EGIS 347
Query: 149 LKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI ++L+D R ++D + E+ +HL++R
Sbjct: 348 PDRQRLIFASKQLDDGRTLSDYNIQKESTLHLVLR 382
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 389 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 447
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 448 QKESTLHLVLRL 459
>gi|388578851|gb|EIM19184.1| ubiquitin [Wallemia sebi CBS 633.66]
Length = 701
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 35 LIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
L ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 206 LFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 264
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 265 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESQDTIDNVKTKIQDK--EGIPPDQQRL 322
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 323 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 351
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 479 TLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 537
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL + V T+ GK VE + VK +I K E + Q LI G
Sbjct: 538 TLHLVLRLRGGMQVFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAG 595
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D + E+ +HL++R
Sbjct: 596 KQLEDGRTLSDYNIQKESTLHLVLR 620
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 555 TLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 613
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL + V T+ GK VE + VK +I K E + Q LI G
Sbjct: 614 TLHLVLRLRGGMQVFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAG 671
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D + E+ +HL++R
Sbjct: 672 KQLEDGRTLSDYNIQKESTLHLVLR 696
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 7 TLTGKTITLDVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 65
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 66 TLHLVLRLRGGMQIFVKTLTGKTITLEVESQDTIDNVKTKIQDK--EGIPPDQQRLIFAG 123
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D + E+ +HL++R
Sbjct: 124 KQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V D+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 282 IFVKTLTGKTITLEVESQDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 340
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL + V T+ GK VE + VK +I K E + Q L
Sbjct: 341 QKESTLHLVLRLRGGMQVFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 398
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 399 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 427
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 80/185 (43%), Gaps = 42/185 (22%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS----------- 87
++ G I + V SD+I +VK +IQ G +Q+L+F G++L +
Sbjct: 362 TLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 421
Query: 88 -----RVR------------------------DYGLADGNVLHLVLRLSDLQAITVTTVC 118
R+R DY + + LHLVLRL + V T+
Sbjct: 422 LHLVLRLRGGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQVFVKTLT 481
Query: 119 GKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVI 178
GK VE + VK +I K E + Q LI G++LED R ++D + E+ +
Sbjct: 482 GKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 539
Query: 179 HLLVR 183
HL++R
Sbjct: 540 HLVLR 544
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 4/129 (3%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V D+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESQDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESQDTIDNVKTKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELED 163
I G++LED
Sbjct: 196 IFAGKQLED 204
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 631 TLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 689
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 690 TLHLVLRL 697
>gi|297263833|ref|XP_002798871.1| PREDICTED: hypothetical protein LOC712934 isoform 2 [Macaca
mulatta]
gi|297263835|ref|XP_001102090.2| PREDICTED: hypothetical protein LOC712934 isoform 1 [Macaca
mulatta]
gi|297263839|ref|XP_002798873.1| PREDICTED: hypothetical protein LOC712934 isoform 4 [Macaca
mulatta]
gi|297263841|ref|XP_002798874.1| PREDICTED: hypothetical protein LOC712934 isoform 5 [Macaca
mulatta]
gi|297263843|ref|XP_002798875.1| PREDICTED: hypothetical protein LOC712934 isoform 6 [Macaca
mulatta]
gi|297263845|ref|XP_002798876.1| PREDICTED: hypothetical protein LOC712934 isoform 7 [Macaca
mulatta]
gi|297263847|ref|XP_002798877.1| PREDICTED: hypothetical protein LOC712934 isoform 8 [Macaca
mulatta]
gi|297263849|ref|XP_002798878.1| PREDICTED: hypothetical protein LOC712934 isoform 9 [Macaca
mulatta]
gi|402888093|ref|XP_003907411.1| PREDICTED: polyubiquitin-C isoform 1 [Papio anubis]
gi|402888095|ref|XP_003907412.1| PREDICTED: polyubiquitin-C isoform 2 [Papio anubis]
gi|402888097|ref|XP_003907413.1| PREDICTED: polyubiquitin-C isoform 3 [Papio anubis]
gi|402888099|ref|XP_003907414.1| PREDICTED: polyubiquitin-C isoform 4 [Papio anubis]
gi|402888101|ref|XP_003907415.1| PREDICTED: polyubiquitin-C isoform 5 [Papio anubis]
gi|402888103|ref|XP_003907416.1| PREDICTED: polyubiquitin-C isoform 6 [Papio anubis]
gi|402888105|ref|XP_003907417.1| PREDICTED: polyubiquitin-C isoform 7 [Papio anubis]
gi|402888107|ref|XP_003907418.1| PREDICTED: polyubiquitin-C isoform 8 [Papio anubis]
gi|402888109|ref|XP_003907419.1| PREDICTED: polyubiquitin-C isoform 9 [Papio anubis]
gi|402888111|ref|XP_003907420.1| PREDICTED: polyubiquitin-C isoform 10 [Papio anubis]
gi|441630368|ref|XP_004089541.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
gi|441630371|ref|XP_004089542.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
Length = 457
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|226469788|emb|CAX76724.1| polyubiquitin [Schistosoma japonicum]
Length = 304
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK + Q G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKTQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|148235355|ref|NP_001080865.1| ubiquitin C [Xenopus laevis]
gi|32766481|gb|AAH54976.1| Ubc-prov protein [Xenopus laevis]
Length = 609
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 594 QKESTLHLVLRL 605
>gi|12849189|dbj|BAB28242.1| unnamed protein product [Mus musculus]
Length = 305
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL+ R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVFR 148
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|296420280|ref|XP_002839703.1| hypothetical protein [Tuber melanosporum Mel28]
gi|13345367|gb|AAK19308.1| polyubiquitin [Tuber borchii]
gi|295635897|emb|CAZ83894.1| unnamed protein product [Tuber melanosporum]
Length = 306
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|213510698|ref|NP_001133175.1| polyubiquitin [Salmo salar]
gi|350534516|ref|NP_001232808.1| uncharacterized protein LOC100228572 [Taeniopygia guttata]
gi|118098426|ref|XP_415105.2| PREDICTED: polyubiquitin-B isoform 2 [Gallus gallus]
gi|118098428|ref|XP_001233377.1| PREDICTED: polyubiquitin-B isoform 1 [Gallus gallus]
gi|432884643|ref|XP_004074520.1| PREDICTED: polyubiquitin-B-like isoform 1 [Oryzias latipes]
gi|432884645|ref|XP_004074521.1| PREDICTED: polyubiquitin-B-like isoform 2 [Oryzias latipes]
gi|432884647|ref|XP_004074522.1| PREDICTED: polyubiquitin-B-like isoform 3 [Oryzias latipes]
gi|432884649|ref|XP_004074523.1| PREDICTED: polyubiquitin-B-like isoform 4 [Oryzias latipes]
gi|449476588|ref|XP_004176460.1| PREDICTED: polyubiquitin-B [Taeniopygia guttata]
gi|104829|pir||S13928 ubiquitin precursor - chicken
gi|533889|gb|AAA29362.1| polyubiquitin [Anopheles gambiae]
gi|197129058|gb|ACH45556.1| putative ubiquitin C variant 4 [Taeniopygia guttata]
gi|197632335|gb|ACH70891.1| polyubiquitin [Salmo salar]
gi|223647274|gb|ACN10395.1| Ubiquitin [Salmo salar]
gi|223673153|gb|ACN12758.1| Ubiquitin [Salmo salar]
gi|449279318|gb|EMC86953.1| Ubiquitin [Columba livia]
Length = 229
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|393245214|gb|EJD52725.1| ubiquitin [Auricularia delicata TFB-10046 SS5]
Length = 305
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|392597236|gb|EIW86558.1| polyubiquitin [Coniophora puteana RWD-64-598 SS2]
Length = 305
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|365986434|ref|XP_003670049.1| hypothetical protein NDAI_0D04930 [Naumovozyma dairenensis CBS 421]
gi|410082970|ref|XP_003959063.1| hypothetical protein KAFR_0I01470 [Kazachstania africana CBS 2517]
gi|444321755|ref|XP_004181533.1| hypothetical protein TBLA_0G00670 [Tetrapisispora blattae CBS 6284]
gi|343768818|emb|CCD24806.1| hypothetical protein NDAI_0D04930 [Naumovozyma dairenensis CBS 421]
gi|372465653|emb|CCF59928.1| hypothetical protein KAFR_0I01470 [Kazachstania africana CBS 2517]
gi|387514578|emb|CCH62014.1| hypothetical protein TBLA_0G00670 [Tetrapisispora blattae CBS 6284]
Length = 229
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|307193107|gb|EFN76024.1| Ubiquitin [Harpegnathos saltator]
Length = 229
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVRTLAGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|289740633|gb|ADD19064.1| ubiquitin/40S ribosomal protein S27a fusion protein [Glossina
morsitans morsitans]
Length = 229
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|226484061|emb|CAX79699.1| ubiquitin C [Schistosoma japonicum]
Length = 305
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q +
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRV 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+++F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRVIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|195403389|ref|XP_002060272.1| GJ16068 [Drosophila virilis]
gi|194140611|gb|EDW57085.1| GJ16068 [Drosophila virilis]
Length = 384
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVF 122
+ LHLVLRL I V T+ GK
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTI 317
>gi|37595366|gb|AAQ94569.1| ubiquitin C [Danio rerio]
Length = 235
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V + GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKPLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + + LH
Sbjct: 162 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLH 220
Query: 102 LVLRLSDLQAITVTT 116
LVLRL I V T
Sbjct: 221 LVLRLRGGMQIFVKT 235
>gi|402888113|ref|XP_003907421.1| PREDICTED: polyubiquitin-C isoform 11 [Papio anubis]
gi|402888115|ref|XP_003907422.1| PREDICTED: polyubiquitin-C isoform 12 [Papio anubis]
gi|426374649|ref|XP_004054182.1| PREDICTED: polyubiquitin-B-like isoform 1 [Gorilla gorilla gorilla]
gi|426374651|ref|XP_004054183.1| PREDICTED: polyubiquitin-B-like isoform 2 [Gorilla gorilla gorilla]
gi|426374653|ref|XP_004054184.1| PREDICTED: polyubiquitin-B-like isoform 3 [Gorilla gorilla gorilla]
gi|426374655|ref|XP_004054185.1| PREDICTED: polyubiquitin-B-like isoform 4 [Gorilla gorilla gorilla]
gi|426374657|ref|XP_004054186.1| PREDICTED: polyubiquitin-B-like isoform 5 [Gorilla gorilla gorilla]
gi|426374659|ref|XP_004054187.1| PREDICTED: polyubiquitin-B-like isoform 6 [Gorilla gorilla gorilla]
gi|426374661|ref|XP_004054188.1| PREDICTED: polyubiquitin-B-like isoform 7 [Gorilla gorilla gorilla]
gi|426374663|ref|XP_004054189.1| PREDICTED: polyubiquitin-B-like isoform 8 [Gorilla gorilla gorilla]
gi|426374665|ref|XP_004054190.1| PREDICTED: polyubiquitin-B-like isoform 9 [Gorilla gorilla gorilla]
gi|15928840|gb|AAH14880.1| UBC protein [Homo sapiens]
Length = 305
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|116202449|ref|XP_001227036.1| polyubiquitin [Chaetomium globosum CBS 148.51]
gi|126139705|ref|XP_001386375.1| hypothetical protein PICST_73878 [Scheffersomyces stipitis CBS
6054]
gi|255948832|ref|XP_002565183.1| Pc22g12390 [Penicillium chrysogenum Wisconsin 54-1255]
gi|367040177|ref|XP_003650469.1| hypothetical protein THITE_2072392 [Thielavia terrestris NRRL 8126]
gi|389633097|ref|XP_003714201.1| polyubiquitin [Magnaporthe oryzae 70-15]
gi|2894304|emb|CAA11267.1| polyubiquitin [Nicotiana tabacum]
gi|3334645|emb|CAA07773.1| polyubiquitin [Gibberella pulicaris]
gi|88177627|gb|EAQ85095.1| polyubiquitin [Chaetomium globosum CBS 148.51]
gi|88766393|gb|ABD49716.1| polyubiquitin [Metarhizium anisopliae]
gi|126093657|gb|ABN68346.1| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|211592200|emb|CAP98527.1| Pc22g12390 [Penicillium chrysogenum Wisconsin 54-1255]
gi|310800960|gb|EFQ35853.1| ubiquitin family protein [Glomerella graminicola M1.001]
gi|322711004|gb|EFZ02578.1| ubiquitin [Metarhizium anisopliae ARSEF 23]
gi|340516961|gb|EGR47207.1| polyubiquitin [Trichoderma reesei QM6a]
gi|346997730|gb|AEO64133.1| hypothetical protein THITE_2072392 [Thielavia terrestris NRRL 8126]
gi|351646534|gb|EHA54394.1| polyubiquitin [Magnaporthe oryzae 70-15]
gi|358386330|gb|EHK23926.1| hypothetical protein TRIVIDRAFT_215920 [Trichoderma virens Gv29-8]
gi|361129858|gb|EHL01740.1| putative Polyubiquitin [Glarea lozoyensis 74030]
gi|378733143|gb|EHY59602.1| polyubiquitin [Exophiala dermatitidis NIH/UT8656]
gi|402085157|gb|EJT80055.1| polyubiquitin [Gaeumannomyces graminis var. tritici R3-111a-1]
gi|406701275|gb|EKD04425.1| hypothetical protein A1Q2_01309 [Trichosporon asahii var. asahii
CBS 8904]
gi|406867327|gb|EKD20365.1| ubiquitin [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
gi|407920052|gb|EKG13270.1| Ubiquitin [Macrophomina phaseolina MS6]
gi|453085016|gb|EMF13059.1| ubiquitin [Mycosphaerella populorum SO2202]
Length = 305
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|440638790|gb|ELR08709.1| polyubiquitin [Geomyces destructans 20631-21]
Length = 381
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|58618886|gb|AAH89218.1| Ubc protein, partial [Rattus norvegicus]
Length = 656
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 59
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 60 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 117
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 118 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 146
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 153 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 211
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 212 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 269
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 270 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 298
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 305 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 363
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 364 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 421
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 422 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 450
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 457 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 515
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 516 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 573
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 574 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 602
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 533 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 591
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQ 138
+ LHLVLRL I V T+ GK VE N VKQ+
Sbjct: 592 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVNTKKVKQE 635
>gi|73695428|gb|AAI03478.1| Ubc protein [Rattus norvegicus]
Length = 430
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 2/122 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE N VKQ+ + V K+
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVNTKKVKQEDTRTFLTTVSRKSPSC 425
Query: 155 IC 156
C
Sbjct: 426 AC 427
>gi|226477470|emb|CAX72429.1| ubiquitin C [Schistosoma japonicum]
gi|226477472|emb|CAX72430.1| ubiquitin C [Schistosoma japonicum]
gi|226477474|emb|CAX72431.1| ubiquitin C [Schistosoma japonicum]
gi|226477476|emb|CAX72432.1| ubiquitin C [Schistosoma japonicum]
gi|226477478|emb|CAX72433.1| ubiquitin C [Schistosoma japonicum]
gi|226477480|emb|CAX72434.1| ubiquitin C [Schistosoma japonicum]
gi|226484001|emb|CAX79669.1| ubiquitin C [Schistosoma japonicum]
gi|226484003|emb|CAX79670.1| ubiquitin C [Schistosoma japonicum]
gi|226484055|emb|CAX79696.1| ubiquitin C [Schistosoma japonicum]
gi|226484057|emb|CAX79697.1| ubiquitin C [Schistosoma japonicum]
gi|226484059|emb|CAX79698.1| ubiquitin C [Schistosoma japonicum]
gi|226484063|emb|CAX79700.1| ubiquitin C [Schistosoma japonicum]
gi|226484065|emb|CAX79701.1| ubiquitin C [Schistosoma japonicum]
gi|226484067|emb|CAX79702.1| ubiquitin C [Schistosoma japonicum]
gi|226484069|emb|CAX79703.1| ubiquitin C [Schistosoma japonicum]
gi|226484071|emb|CAX79704.1| ubiquitin C [Schistosoma japonicum]
gi|226484073|emb|CAX79705.1| ubiquitin C [Schistosoma japonicum]
gi|226484075|emb|CAX79706.1| ubiquitin C [Schistosoma japonicum]
gi|226484077|emb|CAX79707.1| ubiquitin C [Schistosoma japonicum]
gi|226484079|emb|CAX79708.1| ubiquitin C [Schistosoma japonicum]
gi|226484083|emb|CAX79710.1| ubiquitin C [Schistosoma japonicum]
gi|226484311|emb|CAX79711.1| ubiquitin C [Schistosoma japonicum]
gi|226484870|emb|CAX79712.1| ubiquitin C [Schistosoma japonicum]
Length = 305
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|115187323|gb|ABI84246.1| polyubiquitin 10 [Arachis hypogaea]
Length = 192
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK 142
+ LHLVLRL I V T+ GK VE + VK +I K
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK 185
>gi|50307963|ref|XP_453980.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|302595952|sp|P0CG75.1|UBI4P_KLULA RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|5531273|emb|CAB50898.1| polyubiquitin [Kluyveromyces lactis]
gi|49643115|emb|CAG99067.1| KLLA0E00749p [Kluyveromyces lactis]
Length = 381
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|391358178|sp|P0CG48.3|UBC_HUMAN RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|340068|gb|AAA36789.1| ubiquitin [Homo sapiens]
gi|2647408|dbj|BAA23632.1| polyubiquitin UbC [Homo sapiens]
gi|24657522|gb|AAH39193.1| Ubiquitin C [Homo sapiens]
gi|28316336|dbj|BAC56951.1| polyubiquitin C [Homo sapiens]
gi|440903539|gb|ELR54183.1| Polyubiquitin-C, partial [Bos grunniens mutus]
Length = 685
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 594 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 651
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 652 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 670 QKESTLHLVLRL 681
>gi|400599610|gb|EJP67307.1| Ubiquitin subgroup [Beauveria bassiana ARSEF 2860]
Length = 212
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 21/149 (14%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLR-----------------GVESSDTIDNVKSKIQDK--EGIPPDQQRL 178
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 179 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 207
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 44 VIPMRVMES-DSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHL 102
V+ +R +ES D+I +VK +IQ G +Q+L+F G++L + + DY + + LHL
Sbjct: 146 VLRLRGVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHL 204
Query: 103 VLRL 106
VLRL
Sbjct: 205 VLRL 208
>gi|358332080|dbj|GAA27344.2| polyubiquitin-A [Clonorchis sinensis]
Length = 288
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 99/190 (52%), Gaps = 12/190 (6%)
Query: 3 MACVALS-PVLEESLN---FPGNFTHRPEKLSND----SILIFL-SVGGSVIPMRVMESD 53
+AC+ S L ++ + G R +K+ ++ ++ IF+ ++ G I + V SD
Sbjct: 22 LACMTSSQSALRQTTHRSCLAGQIHGRTDKVQSNLRRTAMQIFVKTLTGKTITLEVEASD 81
Query: 54 SIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAIT 113
+I +VK +IQ G +Q+L+F G++L + + DY + + LHLVLRL I
Sbjct: 82 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQIF 140
Query: 114 VTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKR 173
V T+ GK VE + VK +I K E + Q LI G++LED R ++D +
Sbjct: 141 VKTLTGKTITLEVESSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 198
Query: 174 NEAVIHLLVR 183
E+ +HL++R
Sbjct: 199 KESTLHLVLR 208
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 139 IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 197
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 198 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 255
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 256 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 284
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 215 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 273
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 274 QKESTLHLVLRL 285
>gi|261205776|ref|XP_002627625.1| ubiquitin [Ajellomyces dermatitidis SLH14081]
gi|239592684|gb|EEQ75265.1| ubiquitin [Ajellomyces dermatitidis SLH14081]
Length = 381
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V D+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVESGDTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|238580222|ref|XP_002389222.1| hypothetical protein MPER_11681 [Moniliophthora perniciosa FA553]
gi|215451253|gb|EEB90152.1| hypothetical protein MPER_11681 [Moniliophthora perniciosa FA553]
Length = 153
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|156841217|ref|XP_001643983.1| hypothetical protein Kpol_1070p6 [Vanderwaltozyma polyspora DSM
70294]
gi|156114615|gb|EDO16125.1| hypothetical protein Kpol_1070p6 [Vanderwaltozyma polyspora DSM
70294]
Length = 533
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 518 QKESTLHLVLRL 529
>gi|55783587|gb|AAV65292.1| polyubiquitin [Aspergillus fumigatus]
Length = 304
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|67616274|ref|XP_667472.1| ubiquitin B [Cryptosporidium hominis TU502]
gi|54658618|gb|EAL37248.1| ubiquitin B [Cryptosporidium hominis]
Length = 229
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|388571222|gb|AFK73707.1| ubiquitin [Ostrea edulis]
Length = 153
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 7 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDRQRLIFAGKQLEDGRT-LSDYNIQKES 65
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAG 123
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D + E+ +HL++R
Sbjct: 124 KQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 83 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 141
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 142 TLHLVLRL 149
>gi|395517134|ref|XP_003762737.1| PREDICTED: polyubiquitin-B-like [Sarcophilus harrisii]
Length = 305
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G + +F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQXXXIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|390176272|ref|XP_003736175.1| GA30006 [Drosophila pseudoobscura pseudoobscura]
gi|388858740|gb|EIM52248.1| GA30006 [Drosophila pseudoobscura pseudoobscura]
Length = 687
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 594 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 651
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 652 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 670 QKESTLHLVLRL 681
>gi|327291982|ref|XP_003230699.1| PREDICTED: polyubiquitin-C-like [Anolis carolinensis]
Length = 685
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 594 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 651
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 652 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 670 QKESTLHLVLRL 681
>gi|221048065|gb|ACL98140.1| ubiquitin C variant [Epinephelus coioides]
Length = 255
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVK 136
+ LHLVLRL I V T+ GK VE + VK
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 255
>gi|195469924|ref|XP_002099886.1| GE16472 [Drosophila yakuba]
gi|194187410|gb|EDX00994.1| GE16472 [Drosophila yakuba]
Length = 230
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|164661299|ref|XP_001731772.1| hypothetical protein MGL_1040 [Malassezia globosa CBS 7966]
gi|159105673|gb|EDP44558.1| hypothetical protein MGL_1040 [Malassezia globosa CBS 7966]
Length = 154
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|124377852|tpd|FAA00316.1| TPA: polyubiquitin [Eremothecium gossypii]
gi|124377856|tpd|FAA00318.1| TPA: polyubiquitin [Saccharomyces paradoxus NRRL Y-17217]
Length = 380
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|18044723|gb|AAH19850.1| Ubiquitin B [Mus musculus]
Length = 305
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQHRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|45185626|ref|NP_983342.1| ACL062Cp [Ashbya gossypii ATCC 10895]
gi|44981344|gb|AAS51166.1| ACL062Cp [Ashbya gossypii ATCC 10895]
gi|374106548|gb|AEY95457.1| FACL062Cp [Ashbya gossypii FDAG1]
Length = 382
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|366992347|ref|XP_003675939.1| hypothetical protein NCAS_0C05850 [Naumovozyma castellii CBS 4309]
gi|342301804|emb|CCC69575.1| hypothetical protein NCAS_0C05850 [Naumovozyma castellii CBS 4309]
Length = 388
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|350592414|ref|XP_003483459.1| PREDICTED: polyubiquitin-C isoform 1 [Sus scrofa]
gi|350592416|ref|XP_003483460.1| PREDICTED: polyubiquitin-C isoform 2 [Sus scrofa]
gi|350592418|ref|XP_003483461.1| PREDICTED: polyubiquitin-C isoform 3 [Sus scrofa]
gi|350592420|ref|XP_003483462.1| PREDICTED: polyubiquitin-C isoform 4 [Sus scrofa]
gi|302595945|sp|P0CG68.1|UBC_PIG RecName: Full=Polyubiquitin-C; Contains: RecName:
Full=Ubiquitin-related; Contains: RecName:
Full=Ubiquitin; Flags: Precursor
Length = 533
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 518 QKESTLHLVLRL 529
>gi|226484007|emb|CAX79672.1| ubiquitin C [Schistosoma japonicum]
Length = 381
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYHIQKESTLHLVLR 148
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|195137906|ref|XP_002012597.1| GI14272 [Drosophila mojavensis]
gi|193906411|gb|EDW05278.1| GI14272 [Drosophila mojavensis]
Length = 668
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 594 QKESTLHLVLRL 605
>gi|196016942|ref|XP_002118320.1| hypothetical protein TRIADDRAFT_64418 [Trichoplax adhaerens]
gi|190579096|gb|EDV19200.1| hypothetical protein TRIADDRAFT_64418 [Trichoplax adhaerens]
Length = 457
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|156358391|ref|XP_001624503.1| predicted protein [Nematostella vectensis]
gi|156211288|gb|EDO32403.1| predicted protein [Nematostella vectensis]
Length = 229
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRF 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+ +F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRFIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|19112201|ref|NP_595409.1| ubiquitin [Schizosaccharomyces pombe 972h-]
gi|302595955|sp|P0CG72.1|UBI4P_SCHPO RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|3738185|emb|CAA21278.1| ubiquitin [Schizosaccharomyces pombe]
Length = 382
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|50286405|ref|XP_445631.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524936|emb|CAG58542.1| unnamed protein product [Candida glabrata]
Length = 533
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 518 QKESTLHLVLRL 529
>gi|365759560|gb|EHN01342.1| Ubi4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392297682|gb|EIW08781.1| Ubi4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 153
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|363756558|ref|XP_003648495.1| hypothetical protein Ecym_8408 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891695|gb|AET41678.1| Hypothetical protein Ecym_8408 [Eremothecium cymbalariae
DBVPG#7215]
Length = 153
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|353231251|emb|CCD77669.1| putative ubiquitin (ribosomal protein L40) [Schistosoma mansoni]
Length = 379
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 153 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 211
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 212 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 269
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 270 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 298
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 229 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 287
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 288 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 345
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 346 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 374
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 76/144 (52%), Gaps = 4/144 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVI 178
I G++LED R ++D + E ++
Sbjct: 120 IFAGKQLEDGRTLSDYNIQTELIV 143
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 305 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 363
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 364 QKESTLHLVLRL 375
>gi|340939025|gb|EGS19647.1| hypothetical protein CTHT_0041260 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 305
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|322699454|gb|EFY91215.1| ubiquitin [Metarhizium acridum CQMa 102]
Length = 343
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 85/155 (54%), Gaps = 4/155 (2%)
Query: 30 SNDSILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSR 88
++ ++ IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L +
Sbjct: 35 TDAAMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT- 93
Query: 89 VRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVD 148
+ DY + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 94 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIP 151
Query: 149 LKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R ++D + E+ +HL++R
Sbjct: 152 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 186
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 193 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 251
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 252 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 309
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 310 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 338
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 269 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 327
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 328 QKESTLHLVLRL 339
>gi|320580936|gb|EFW95158.1| Ubiquitin C variant [Ogataea parapolymorpha DL-1]
Length = 761
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +V+ IQ G +++L+F G +L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVESSDTIDNVESEIQDKEGIPPDQRRLIFAGMQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 670 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 727
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 728 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 687 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 745
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 746 QKESTLHLVLRL 757
>gi|225558948|gb|EEH07231.1| ubiquitin [Ajellomyces capsulatus G186AR]
gi|240281869|gb|EER45372.1| polyubiquitin [Ajellomyces capsulatus H143]
gi|325088005|gb|EGC41315.1| polyubiquitin [Ajellomyces capsulatus H88]
Length = 305
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVESADTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|182407854|gb|ACB87918.1| polyubiquitin 3 [Malus x domestica]
Length = 188
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 3 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 61
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 62 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 119
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 120 KQLEDGRTLADYNIQKESTLHLVLR 144
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 75 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 133
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK 142
+ LHLVLRL + V T+ G VE + VK +I K
Sbjct: 134 QKESTLHLVLRLRGGMQMFVKTLTGNTITLEVETSDTIDNVKDKIQDK 181
>gi|168028716|ref|XP_001766873.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681852|gb|EDQ68275.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 344
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYSIQKESTLHLVLR 148
>gi|32400967|gb|AAP80689.1| polyubiquitin [Griffithsia japonica]
Length = 246
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 20 IFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 78
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 79 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDK--EGIPPDQQRL 136
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 137 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 165
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 96 IFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 154
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 155 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDK--EGIPPDQQRL 212
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 213 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 241
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 172 IFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 230
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 231 QKESTLHLVLRL 242
>gi|225715800|gb|ACO13746.1| Ubiquitin [Esox lucius]
Length = 229
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD++ +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTVENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|73747822|gb|AAZ82816.1| ubiquitin monomer protein [Morus mongolica]
Length = 152
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVIR 148
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLV+RL
Sbjct: 138 QKESTLHLVIRL 149
>gi|226477454|emb|CAX72421.1| ubiquitin C [Schistosoma japonicum]
gi|226477456|emb|CAX72422.1| ubiquitin C [Schistosoma japonicum]
gi|226477458|emb|CAX72423.1| ubiquitin C [Schistosoma japonicum]
gi|226477460|emb|CAX72424.1| ubiquitin C [Schistosoma japonicum]
gi|226477462|emb|CAX72425.1| ubiquitin C [Schistosoma japonicum]
gi|226477464|emb|CAX72426.1| ubiquitin C [Schistosoma japonicum]
gi|226484015|emb|CAX79676.1| ubiquitin C [Schistosoma japonicum]
gi|226484017|emb|CAX79677.1| ubiquitin C [Schistosoma japonicum]
gi|226484019|emb|CAX79678.1| ubiquitin C [Schistosoma japonicum]
gi|226484021|emb|CAX79679.1| ubiquitin C [Schistosoma japonicum]
gi|226484023|emb|CAX79680.1| ubiquitin C [Schistosoma japonicum]
gi|226484027|emb|CAX79682.1| ubiquitin C [Schistosoma japonicum]
gi|226484029|emb|CAX79683.1| ubiquitin C [Schistosoma japonicum]
gi|226484031|emb|CAX79684.1| ubiquitin C [Schistosoma japonicum]
gi|226484033|emb|CAX79685.1| ubiquitin C [Schistosoma japonicum]
gi|226484035|emb|CAX79686.1| ubiquitin C [Schistosoma japonicum]
gi|226484037|emb|CAX79687.1| ubiquitin C [Schistosoma japonicum]
gi|226484039|emb|CAX79688.1| ubiquitin C [Schistosoma japonicum]
gi|226484041|emb|CAX79689.1| ubiquitin C [Schistosoma japonicum]
gi|226484043|emb|CAX79690.1| ubiquitin C [Schistosoma japonicum]
gi|226484045|emb|CAX79691.1| ubiquitin C [Schistosoma japonicum]
gi|226484049|emb|CAX79693.1| ubiquitin C [Schistosoma japonicum]
gi|226484051|emb|CAX79694.1| ubiquitin C [Schistosoma japonicum]
gi|226484053|emb|CAX79695.1| ubiquitin C [Schistosoma japonicum]
gi|226484081|emb|CAX79709.1| ubiquitin C [Schistosoma japonicum]
gi|443725027|gb|ELU12769.1| hypothetical protein CAPTEDRAFT_192594 [Capitella teleta]
Length = 229
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|224069394|ref|XP_002326346.1| predicted protein [Populus trichocarpa]
gi|222833539|gb|EEE72016.1| predicted protein [Populus trichocarpa]
Length = 306
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK++IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVENSDTIDNVKVKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G+ I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGNTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ G VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGNTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|350537449|ref|NP_001232759.1| putative ubiquitin C variant 5 [Taeniopygia guttata]
gi|350537609|ref|NP_001232766.1| putative ubiquitin C variant 14 [Taeniopygia guttata]
gi|291404973|ref|XP_002718831.1| PREDICTED: ubiquitin B-like [Oryctolagus cuniculus]
gi|344297907|ref|XP_003420637.1| PREDICTED: polyubiquitin-B-like [Loxodonta africana]
gi|410979979|ref|XP_003996358.1| PREDICTED: polyubiquitin-B isoform 1 [Felis catus]
gi|410979981|ref|XP_003996359.1| PREDICTED: polyubiquitin-B isoform 2 [Felis catus]
gi|302595871|sp|P0CG53.1|UBB_BOVIN RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|89994036|gb|AAI14002.1| Polyubiquitin [Bos taurus]
gi|197129050|gb|ACH45548.1| putative ubiquitin C variant 1 [Taeniopygia guttata]
gi|197129061|gb|ACH45559.1| putative ubiquitin C variant 5 [Taeniopygia guttata]
gi|197129064|gb|ACH45562.1| putative ubiquitin C variant 9 [Taeniopygia guttata]
gi|197129068|gb|ACH45566.1| putative ubiquitin C variant 14 [Taeniopygia guttata]
gi|296476687|tpg|DAA18802.1| TPA: polyubiquitin [Bos taurus]
Length = 305
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|30060222|gb|AAP13102.1| polyubiquitin, partial [Schistosoma japonicum]
Length = 340
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK 142
+ LHLVLRL I V T+ GK VE + VK +I K
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK 337
>gi|444434917|dbj|BAM77033.1| ubiquitin C [Homo sapiens]
Length = 685
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 594 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 651
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 652 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPCDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V D+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPCDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 670 QKESTLHLVLRL 681
>gi|57163957|ref|NP_001009202.1| polyubiquitin-B [Ovis aries]
gi|302595880|sp|P0CG55.1|UBB_SHEEP RecName: Full=Polyubiquitin-B; Contains: RecName:
Full=Ubiquitin-related; Contains: RecName:
Full=Ubiquitin; Flags: Precursor
gi|2707837|gb|AAB92373.1| polyubiquitin [Ovis aries]
Length = 305
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLR+ I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRMRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|374717833|gb|AEZ66647.1| putative beta-1,6-glucanase [Wickerhamomyces anomalus]
gi|374717835|gb|AEZ66648.1| putative beta-1,6-glucanase [Wickerhamomyces anomalus]
Length = 381
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|361130305|pdb|3B08|A Chain A, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
Linear Di- Ubiquitin
gi|361130307|pdb|3B08|D Chain D, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
Linear Di- Ubiquitin
gi|361130309|pdb|3B08|G Chain G, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
Linear Di- Ubiquitin
gi|361130311|pdb|3B08|J Chain J, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
Linear Di- Ubiquitin
gi|361130437|pdb|3B0A|A Chain A, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
Linear Di- Ubiquitin
gi|361130439|pdb|3B0A|D Chain D, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
Linear Di- Ubiquitin
Length = 152
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|343960965|dbj|BAK62072.1| ubiquitin [Pan troglodytes]
Length = 177
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 7 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 65
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAG 123
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D + E+ +HL++R
Sbjct: 124 KQLEDGRALSDYNIQKESTLHLVLR 148
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 83 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRA-LSDYNIQKES 141
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHV 126
LHLVLRL I V T+ GK V
Sbjct: 142 TLHLVLRLRGGMQIFVKTLTGKTITLEV 169
>gi|350537349|ref|NP_001232755.1| putative ubiquitin C variant 4 [Taeniopygia guttata]
gi|326929576|ref|XP_003210936.1| PREDICTED: polyubiquitin-like [Meleagris gallopavo]
gi|197129060|gb|ACH45558.1| putative ubiquitin C variant 4 [Taeniopygia guttata]
gi|225708456|gb|ACO10074.1| Ubiquitin [Osmerus mordax]
Length = 153
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|149535948|ref|XP_001508553.1| PREDICTED: polyubiquitin-C-like [Ornithorhynchus anatinus]
gi|149641796|ref|XP_001508904.1| PREDICTED: polyubiquitin-C-like [Ornithorhynchus anatinus]
gi|301770987|ref|XP_002920911.1| PREDICTED: hypothetical protein LOC100483436 isoform 1 [Ailuropoda
melanoleuca]
gi|301770989|ref|XP_002920912.1| PREDICTED: hypothetical protein LOC100483436 isoform 2 [Ailuropoda
melanoleuca]
gi|197129062|gb|ACH45560.1| putative ubiquitin C variant 7 [Taeniopygia guttata]
gi|197129063|gb|ACH45561.1| putative ubiquitin C variant 7 [Taeniopygia guttata]
Length = 381
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|117558776|gb|AAI27396.1| Zgc:153686 [Danio rerio]
Length = 533
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G++LED R ++D + E+ +HL++
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVL 299
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 518 QKESTLHLVLRL 529
>gi|114159828|gb|ABI53721.1| polyubiquitin [Pyropia yezoensis]
Length = 457
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|6322989|ref|NP_013061.1| ubiquitin [Saccharomyces cerevisiae S288c]
gi|260940391|ref|XP_002614495.1| ubiquitin [Clavispora lusitaniae ATCC 42720]
gi|302595956|sp|P0CG63.1|UBI4P_YEAST RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|4734|emb|CAA29198.1| unnamed protein product [Saccharomyces cerevisiae]
gi|1360231|emb|CAA97489.1| UBI4 [Saccharomyces cerevisiae]
gi|151941132|gb|EDN59510.1| poly-ubiquitin [Saccharomyces cerevisiae YJM789]
gi|190406010|gb|EDV09277.1| hypothetical protein SCRG_04952 [Saccharomyces cerevisiae RM11-1a]
gi|238851681|gb|EEQ41145.1| ubiquitin [Clavispora lusitaniae ATCC 42720]
gi|259147952|emb|CAY81201.1| Ubi4p [Saccharomyces cerevisiae EC1118]
gi|285813387|tpg|DAA09283.1| TPA: ubiquitin [Saccharomyces cerevisiae S288c]
gi|323336529|gb|EGA77795.1| Ubi4p [Saccharomyces cerevisiae Vin13]
gi|349579690|dbj|GAA24851.1| K7_Ubi4p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 381
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|365764258|gb|EHN05782.1| Ubi4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|452984043|gb|EME83800.1| hypothetical protein MYCFIDRAFT_60610 [Pseudocercospora fijiensis
CIRAD86]
Length = 229
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|343485961|dbj|BAK61738.1| ubiquitin [Larcopyle butschlii]
Length = 188
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I++VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I++VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK 142
+ LHLVLRL I V T+ GK VE + VK +I K
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQDK 185
>gi|336372565|gb|EGO00904.1| hypothetical protein SERLA73DRAFT_178893 [Serpula lacrymans var.
lacrymans S7.3]
Length = 312
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 85/161 (52%), Gaps = 9/161 (5%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHL-----LVRKSAKVRA 190
I G++LED R ++D + E+ +HL +V KS+ V A
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVFVCVVVTKSSNVTA 312
>gi|228311825|pdb|2W9N|A Chain A, Crystal Structure Of Linear Di-Ubiquitin
Length = 152
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|46128781|ref|XP_388944.1| hypothetical protein FG08768.1 [Gibberella zeae PH-1]
gi|189190970|ref|XP_001931824.1| ubiquitin [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330938030|ref|XP_003305664.1| hypothetical protein PTT_18575 [Pyrenophora teres f. teres 0-1]
gi|398405616|ref|XP_003854274.1| hypothetical protein MYCGRDRAFT_57170 [Zymoseptoria tritici IPO323]
gi|187973430|gb|EDU40929.1| ubiquitin [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311317170|gb|EFQ86204.1| hypothetical protein PTT_18575 [Pyrenophora teres f. teres 0-1]
gi|339474157|gb|EGP89250.1| hypothetical protein MYCGRDRAFT_57170 [Zymoseptoria tritici IPO323]
gi|344301515|gb|EGW31827.1| polyubiquitin [Spathaspora passalidarum NRRL Y-27907]
gi|346970979|gb|EGY14431.1| ubiquitin [Verticillium dahliae VdLs.17]
gi|358394958|gb|EHK44351.1| hypothetical protein TRIATDRAFT_300588 [Trichoderma atroviride IMI
206040]
gi|401882407|gb|EJT46666.1| hypothetical protein A1Q1_04737 [Trichosporon asahii var. asahii
CBS 2479]
gi|408390396|gb|EKJ69797.1| hypothetical protein FPSE_10045 [Fusarium pseudograminearum CS3096]
gi|429860337|gb|ELA35078.1| ubiquitin [Colletotrichum gloeosporioides Nara gc5]
gi|449302308|gb|EMC98317.1| hypothetical protein BAUCODRAFT_32336 [Baudoinia compniacensis UAMH
10762]
gi|452843190|gb|EME45125.1| hypothetical protein DOTSEDRAFT_70987 [Dothistroma septosporum
NZE10]
Length = 229
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|3776536|gb|AAC64787.1| polyubiquitin [Schizosaccharomyces pombe]
Length = 610
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 594 QKESTLHLVLRL 605
>gi|302595947|sp|P0CG73.1|UBI1P_CANAL RecName: Full=Polyubiquitin; Contains: RecName:
Full=Ubiquitin-related; Contains: RecName:
Full=Ubiquitin; Flags: Precursor
gi|1143188|gb|AAA84868.1| ubiquitin precursor [Candida albicans]
Length = 229
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 83/155 (53%), Gaps = 4/155 (2%)
Query: 30 SNDSILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSR 88
S + IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L +
Sbjct: 73 SRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT- 131
Query: 89 VRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVD 148
+ DY + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIP 189
Query: 149 LKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R ++D + E+ +HL++R
Sbjct: 190 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLR I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRSRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|157420221|gb|ABV55648.1| Ubc protein, partial [Penaeus monodon]
Length = 432
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 54 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 112
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 113 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 170
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 171 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 199
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 130 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 188
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 189 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 246
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 247 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 275
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 282 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 340
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 341 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 398
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E +HL++R
Sbjct: 399 IFAGKQLEDGRTLSDYNIQKEFTLHLVLR 427
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 67/126 (53%), Gaps = 3/126 (2%)
Query: 58 VKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTV 117
VK +IQ G +Q+L+F G++L + + DY + + LHLVLRL I V T+
Sbjct: 1 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQIFVKTL 59
Query: 118 CGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAV 177
GK VE + VK +I K E + Q LI G++LED R ++D + E+
Sbjct: 60 TGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 117
Query: 178 IHLLVR 183
+HL++R
Sbjct: 118 LHLVLR 123
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 358 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 416
Query: 95 ADGNVLHLVLRL 106
LHLVLRL
Sbjct: 417 QKEFTLHLVLRL 428
>gi|255732802|ref|XP_002551324.1| ubiquitin [Candida tropicalis MYA-3404]
gi|240131065|gb|EER30626.1| ubiquitin [Candida tropicalis MYA-3404]
Length = 299
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 76/142 (53%), Gaps = 6/142 (4%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITD--ICKRN 174
I G++LED R ++D I K+N
Sbjct: 272 IFAGKQLEDGRTLSDYNISKKN 293
>gi|295661227|ref|XP_002791169.1| ubiquitin [Paracoccidioides sp. 'lutzii' Pb01]
gi|226281096|gb|EEH36662.1| ubiquitin [Paracoccidioides sp. 'lutzii' Pb01]
Length = 305
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V D+I VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVESGDTIDGVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|110671522|gb|ABG82012.1| putative ubiquitin B [Diaphorina citri]
gi|387019647|gb|AFJ51941.1| putative ubiquitin B [Crotalus adamanteus]
Length = 229
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|12833702|dbj|BAB22630.1| unnamed protein product [Mus musculus]
Length = 229
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|19483857|gb|AAH25894.1| Ubc protein [Mus musculus]
gi|23958188|gb|AAH36303.1| Ubc protein [Mus musculus]
gi|26372121|dbj|BAB27296.2| unnamed protein product [Mus musculus]
gi|62825885|gb|AAH94012.1| Ubc protein [Mus musculus]
Length = 354
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQ 138
+ LHLVLRL I V T+ GK VE VKQ+
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVTTKKVKQE 333
>gi|84998672|ref|XP_954057.1| ubiquitin [Theileria annulata]
gi|65305055|emb|CAI73380.1| ubiquitin, putative [Theileria annulata]
Length = 159
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 85/156 (54%), Gaps = 5/156 (3%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR-KSAKVR 189
I G++LED R ++D + E+ +HL++R + KV+
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGKVK 155
>gi|391348265|ref|XP_003748368.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-A-like [Metaseiulus
occidentalis]
Length = 913
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYSI 669
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 670 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 727
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 728 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLLDYNIQKESTLHLVLR 452
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK+++Q G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGXTITLDVEASDTIENVKVKLQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 763 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 821
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E Q L
Sbjct: 822 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGXPPDQQRL 879
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 880 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 908
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVELADTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 839 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRT-LSDYNI 897
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 898 QKESTLHLVLRL 909
>gi|349592832|gb|AEP96154.1| ubiquitin C-like protein [Euplectes orix]
Length = 224
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|290750644|gb|ADD52202.1| ubiquitin [Catharanthus roseus]
gi|341869050|gb|AEK98798.1| ubiquitin [Carthamus tinctorius]
Length = 381
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 ILAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK + Q G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKTQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTTDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADCNIQKESTLHLVLR 148
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+ G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLILAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|254574192|ref|XP_002494205.1| Ubiquitin [Komagataella pastoris GS115]
gi|238034004|emb|CAY72026.1| Ubiquitin [Komagataella pastoris GS115]
Length = 310
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|164430972|gb|ABY55758.1| ubiquitin [Drosophila silvestris]
Length = 222
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 11 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 69
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 70 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 127
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 128 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 156
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 102 LVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEEL 161
LVLRL I V T+ GK VE + VK +I K E + Q LI G++L
Sbjct: 1 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQL 58
Query: 162 EDQRLITDICKRNEAVIHLLVR 183
ED R ++D + E+ +HL++R
Sbjct: 59 EDGRTLSDYNIQKESTLHLVLR 80
>gi|443922596|gb|ELU42015.1| polyubiquitin [Rhizoctonia solani AG-1 IA]
Length = 681
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 83/152 (54%), Gaps = 4/152 (2%)
Query: 33 SILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRD 91
++ IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + D
Sbjct: 452 TMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSD 510
Query: 92 YGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKN 151
Y + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 511 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQ 568
Query: 152 QELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R ++D + E+ +HL++R
Sbjct: 569 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 600
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 531 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 589
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 590 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 647
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 648 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 676
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 607 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 665
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 666 QKESTLHLVLRL 677
>gi|441630341|ref|XP_004089535.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
Length = 590
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 83/152 (54%), Gaps = 4/152 (2%)
Query: 33 SILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRD 91
++ IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + D
Sbjct: 57 TMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSD 115
Query: 92 YGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKN 151
Y + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 116 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQ 173
Query: 152 QELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R ++D + E+ +HL++R
Sbjct: 174 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 205
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 212 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 270
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 271 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 328
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 329 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 357
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 364 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 422
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 423 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 480
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 481 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 509
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 440 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 498
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 499 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 556
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 557 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 585
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 516 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 574
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 575 QKESTLHLVLRL 586
>gi|225682563|gb|EEH20847.1| ubiquitin [Paracoccidioides brasiliensis Pb03]
Length = 305
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V D+I SVK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESVDTIDSVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LTDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|213401917|ref|XP_002171731.1| ubiquitin [Schizosaccharomyces japonicus yFS275]
gi|211999778|gb|EEB05438.1| ubiquitin [Schizosaccharomyces japonicus yFS275]
Length = 382
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|195170771|ref|XP_002026185.1| GL16204 [Drosophila persimilis]
gi|194111065|gb|EDW33108.1| GL16204 [Drosophila persimilis]
Length = 307
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|148687613|gb|EDL19560.1| ubiquitin C, isoform CRA_a [Mus musculus]
gi|148687614|gb|EDL19561.1| ubiquitin C, isoform CRA_a [Mus musculus]
Length = 614
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 263 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 321
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 322 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 379
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 380 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 408
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 415 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 473
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 474 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 531
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 532 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 560
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 34/180 (18%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS------- 87
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214
Query: 88 ---------RVR---------------DYGLADGNVLHLVLRLSDLQAITVTTVCGKVFE 123
R+R +Y + + LHLVLRL I V T+ GK
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTINYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 274
Query: 124 FHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
VE + VK +I K E + Q LI G++LED R ++D + E+ +HL++R
Sbjct: 275 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 332
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 491 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 549
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQ 138
+ LHLVLRL I V T+ GK VE VKQ+
Sbjct: 550 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVTTKKVKQE 593
>gi|225709684|gb|ACO10688.1| Ubiquitin [Caligus rogercresseyi]
Length = 229
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKTKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|149063232|gb|EDM13555.1| rCG21222, isoform CRA_a [Rattus norvegicus]
gi|149063234|gb|EDM13557.1| rCG21222, isoform CRA_a [Rattus norvegicus]
Length = 278
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 2/122 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE N VKQ+ + V K+
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVNTKKVKQEDTRTFLTTVSRKSPSC 273
Query: 155 IC 156
C
Sbjct: 274 AC 275
>gi|12851404|dbj|BAB29028.1| unnamed protein product [Mus musculus]
Length = 305
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLGVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +I+ G +Q+L+F G++L S + DY
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIRDKEGIPPDQQRLIFAGKQL-EDGSTLSDYNN 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLGVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|241953793|ref|XP_002419618.1| ubiquitin, putative [Candida dubliniensis CD36]
gi|302595951|sp|P0CG74.1|UBI4P_CANAL RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|2437825|emb|CAA90901.1| polyubiquitin [Candida albicans]
gi|223642958|emb|CAX43214.1| ubiquitin, putative [Candida dubliniensis CD36]
Length = 305
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|389608337|dbj|BAM17780.1| ubiquitin [Papilio xuthus]
Length = 306
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|226289971|gb|EEH45455.1| ubiquitin [Paracoccidioides brasiliensis Pb18]
Length = 305
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V D+I SVK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESVDTIDSVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|291413653|ref|XP_002723083.1| PREDICTED: ubiquitin B [Oryctolagus cuniculus]
gi|55977015|gb|AAV68344.1| ubiquitin C splice variant [Homo sapiens]
gi|357610605|gb|EHJ67056.1| putative ubiquitin C variant 2 [Danaus plexippus]
Length = 229
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|38114661|gb|AAH08955.2| UBC protein, partial [Homo sapiens]
Length = 546
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 83/152 (54%), Gaps = 4/152 (2%)
Query: 33 SILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRD 91
++ IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + D
Sbjct: 13 TMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSD 71
Query: 92 YGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKN 151
Y + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 72 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQ 129
Query: 152 QELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R ++D + E+ +HL++R
Sbjct: 130 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 161
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 168 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 226
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 227 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 284
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 285 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 313
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 320 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 378
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 379 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 436
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 437 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 465
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 396 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 454
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 455 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 512
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 513 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 541
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 472 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 530
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 531 QKESTLHLVLRL 542
>gi|340058|gb|AAA36787.1| ubiquitin precursor, partial [Homo sapiens]
Length = 269
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 43 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 101
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 102 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 159
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 160 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 188
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 119 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 177
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 178 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 235
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 236 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 264
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
Query: 72 KQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRN 131
+Q+L+F G++L + + DY + + LHLVLRL I V T+ GK VE
Sbjct: 4 QQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 62
Query: 132 VGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
+ VK +I K E + Q LI G++LED R ++D + E+ +HL++R
Sbjct: 63 IENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 112
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 195 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 253
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 254 QKESTLHLVLRL 265
>gi|68472143|ref|XP_719867.1| hypothetical protein CaO19.6771 [Candida albicans SC5314]
gi|68472378|ref|XP_719750.1| hypothetical protein CaO19.14063 [Candida albicans SC5314]
gi|3687425|emb|CAA76783.1| polyubiquitin [Candida albicans]
gi|46441582|gb|EAL00878.1| hypothetical protein CaO19.14063 [Candida albicans SC5314]
gi|46441708|gb|EAL01003.1| hypothetical protein CaO19.6771 [Candida albicans SC5314]
gi|238881109|gb|EEQ44747.1| hypothetical protein CAWG_03035 [Candida albicans WO-1]
gi|354545623|emb|CCE42351.1| hypothetical protein CPAR2_809000 [Candida parapsilosis]
Length = 229
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|226484047|emb|CAX79692.1| ubiquitin C [Schistosoma japonicum]
Length = 229
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++L+D R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLKDGRTLSDYNIQKESTLHLVLR 224
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-KDGRTLSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|226484009|emb|CAX79673.1| ubiquitin C [Schistosoma japonicum]
gi|226484011|emb|CAX79674.1| ubiquitin C [Schistosoma japonicum]
gi|226484013|emb|CAX79675.1| ubiquitin C [Schistosoma japonicum]
Length = 153
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|119500448|ref|XP_001266981.1| polyubiquitin (UbiD), putative [Neosartorya fischeri NRRL 181]
gi|121707680|ref|XP_001271909.1| polyubiquitin (UbiD), putative [Aspergillus clavatus NRRL 1]
gi|119400057|gb|EAW10483.1| polyubiquitin (UbiD), putative [Aspergillus clavatus NRRL 1]
gi|119415146|gb|EAW25084.1| polyubiquitin (UbiD), putative [Neosartorya fischeri NRRL 181]
Length = 305
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|335345806|gb|AEH41483.1| ubiquitin [Endocarpon pusillum]
Length = 305
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKEFTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|28436479|gb|AAO43306.1| putative polyubiquitin [Arabidopsis thaliana]
Length = 325
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 35 LIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
+ F ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 23 IFFKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 81
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I + T+ GK VE + VK +I K E + Q L
Sbjct: 82 QKESTLHLVLRLRGGMQIFLKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 139
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 140 IFAGKQLEDGRTLADYNIQKESTLHLVLR 168
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 76/145 (52%), Gaps = 4/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V S++I +VK +IQ +Q+L+F G++L + + DY + +
Sbjct: 179 TLTGKTITLEVESSNTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 237
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 238 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQDK--EGIPPDQQRLIF-G 294
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 295 KQLEDGRTLADYNIQKESTLHLVLR 319
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 91 DYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLK 150
DY + + LHLVLRL I T+ GK VE + VK +I K E +
Sbjct: 2 DYNIQKESTLHLVLRLRGGMQIFFKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPD 59
Query: 151 NQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R + D + E+ +HL++R
Sbjct: 60 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 92
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V S +I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 255 TLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIF-GKQLEDGRT-LADYNIQKES 312
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 313 TLHLVLRL 320
>gi|344243115|gb|EGV99218.1| Ubiquitin [Cricetulus griseus]
Length = 430
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRPLSDYNIQKESTLHLVLR 148
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRP-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPRDTIENVKAWIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRPLSDYNIQKESTLHLVLR 224
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V D+I +VK IQ G +Q+L+F G++L + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPRDTIENVKAWIQDKEGIPPDQQRLIFAGKQLEDGRP-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPRDTIENVKAWIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRPLSDYNIQKESTLHLVLR 300
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V D+I +VK IQ G +Q+L+F G++L + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPRDTIENVKAWIQDKEGIPPDQQRLIFAGKQLEDGRP-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPRDTIENVKAWIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRPLSDYNIQKESTLHLVLR 376
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V D+I +VK IQ G +Q+L+F G++L + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPRDTIENVKAWIQDKEGIPPDQQRLIFAGKQLEDGRP-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFV 147
+ LHLVLRL I V T+ GK VE + KQ+ GR F+
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSNTIKKSKQE---DGRTFL 415
>gi|61223100|gb|AAX40652.1| polyubiquitin [Oryza sativa Japonica Group]
Length = 381
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+LVF G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLVFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
+ G++LED R + D + E+ +HL++R
Sbjct: 272 VFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|14250448|gb|AAH08661.1| Ubc protein [Mus musculus]
Length = 202
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQ 138
+ LHLVLRL I V T+ GK VE VKQ+
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVTTKKVKQE 181
>gi|61369554|gb|AAX43350.1| ubiquitin B [synthetic construct]
Length = 230
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|157093353|gb|ABV22331.1| ubiquitin [Noctiluca scintillans]
Length = 302
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYSIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 13/211 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVSIEATELN 207
I G++LED R ++D + E+ +HL++R ++ K + D E S +
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVK 179
Query: 208 EKGADVVG--EHQFETLFMGYQIRERKLLQN 236
K D G Q +F G Q+ + + L +
Sbjct: 180 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 210
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYSI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|126352454|ref|NP_001075331.1| ubiquitin C [Equus caballus]
gi|302393801|sp|Q8MKD1.3|UBB_HORSE RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
Contains: RecName: Full=Ubiquitin-related; Flags:
Precursor
gi|21070215|gb|AAM34211.1|AF506969_1 ubiquitin [Equus caballus]
Length = 305
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+ +F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRFIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|195340400|ref|XP_002036801.1| GM12582 [Drosophila sechellia]
gi|194130917|gb|EDW52960.1| GM12582 [Drosophila sechellia]
Length = 321
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLLGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEF 124
+ LHLVLRL I V T+ GK F
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTISF 319
>gi|328353975|emb|CCA40372.1| Ubiquitin cross-reactive protein [Komagataella pastoris CBS 7435]
Length = 386
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|156087036|ref|XP_001610925.1| polyubiquitin [Babesia bovis T2Bo]
gi|154798178|gb|EDO07357.1| polyubiquitin, putative [Babesia bovis]
Length = 233
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|71020945|ref|XP_760703.1| hypothetical protein UM04556.1 [Ustilago maydis 521]
gi|46100297|gb|EAK85530.1| hypothetical protein UM04556.1 [Ustilago maydis 521]
Length = 286
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 83/152 (54%), Gaps = 4/152 (2%)
Query: 33 SILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRD 91
S+ IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + D
Sbjct: 58 SMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSD 116
Query: 92 YGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKN 151
Y + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 117 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQ 174
Query: 152 QELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R ++D + E+ +HL++R
Sbjct: 175 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 206
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 137 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 195
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 196 QKESTLHLVLRL 207
>gi|410976446|ref|XP_003994631.1| PREDICTED: polyubiquitin-B-like [Felis catus]
Length = 229
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|387916118|gb|AFK11668.1| polyubiquitin-like protein [Callorhinchus milii]
Length = 381
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFVGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + L Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPLDQQCL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G + +Q L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPLDQQCLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|452824412|gb|EME31415.1| ubiquitin [Galdieria sulphuraria]
Length = 229
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|372467011|pdb|3U30|A Chain A, Crystal Structure Of A Linear-Specific Ubiquitin Fab Bound
To Linear Ubiquitin
gi|372467014|pdb|3U30|D Chain D, Crystal Structure Of A Linear-Specific Ubiquitin Fab Bound
To Linear Ubiquitin
Length = 172
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 23 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 81
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 82 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 139
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 140 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 168
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 99 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 157
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 158 QKESTLHLVLRL 169
>gi|325302882|tpg|DAA34473.1| TPA_exp: ubiquitin [Amblyomma variegatum]
Length = 241
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 4 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 62
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 63 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 120
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 121 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 149
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 80 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 138
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 139 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 196
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL +R
Sbjct: 197 IFAGKQLEDGRTLSDYNIQKESTLHLGLR 225
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 156 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 214
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKV 121
+ LHL LRL I V T+ GK
Sbjct: 215 QKESTLHLGLRLRGGMQIFVKTLTGKT 241
>gi|1332579|emb|CAA66667.1| polyubiquitin [Pinus sylvestris]
Length = 761
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVENSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLADYNIQKESTLHLVLR 528
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 593
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 594 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 651
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 652 IFAGKQLEDGRTLADYNIQKESTLHLVLR 680
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 669
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ K VE + VK +I K E + Q L
Sbjct: 670 QKESTLHLVLRLRGGMQIFVKTLTAKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 727
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 728 IFAGKQLEDGRTLADYNIQKESTLHLVLR 756
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 687 IFVKTLTAKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 745
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 746 QKESTLHLVLRL 757
>gi|226473064|emb|CAX71218.1| polyubiquitin [Schistosoma japonicum]
Length = 194
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVK 136
+ LHLVLRL I V T+ GK VE + VK
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 179
>gi|219118861|ref|XP_002180197.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|219118863|ref|XP_002180198.1| ubiquitin extension protein 4 [Phaeodactylum tricornutum CCAP
1055/1]
gi|217408454|gb|EEC48388.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408455|gb|EEC48389.1| ubiquitin extension protein 4 [Phaeodactylum tricornutum CCAP
1055/1]
Length = 381
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|326931517|ref|XP_003211875.1| PREDICTED: polyubiquitin-B-like isoform 1 [Meleagris gallopavo]
gi|326931519|ref|XP_003211876.1| PREDICTED: polyubiquitin-B-like isoform 2 [Meleagris gallopavo]
gi|149052896|gb|EDM04713.1| rCG34296, isoform CRA_a [Rattus norvegicus]
gi|149052897|gb|EDM04714.1| rCG34296, isoform CRA_a [Rattus norvegicus]
gi|344245202|gb|EGW01306.1| Ubiquitin [Cricetulus griseus]
Length = 153
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|169607224|ref|XP_001797032.1| hypothetical protein SNOG_06667 [Phaeosphaeria nodorum SN15]
gi|111065378|gb|EAT86498.1| hypothetical protein SNOG_06667 [Phaeosphaeria nodorum SN15]
Length = 234
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|11024714|ref|NP_061828.1| polyubiquitin-B precursor [Homo sapiens]
gi|57114099|ref|NP_001009117.1| polyubiquitin-B [Pan troglodytes]
gi|157427740|ref|NP_001098779.1| ubiquitin [Sus scrofa]
gi|302563653|ref|NP_001181737.1| polyubiquitin-B [Macaca mulatta]
gi|109113442|ref|XP_001087796.1| PREDICTED: ubiquitin D-like isoform 1 [Macaca mulatta]
gi|109113444|ref|XP_001088043.1| PREDICTED: ubiquitin D-like isoform 3 [Macaca mulatta]
gi|109113446|ref|XP_001087919.1| PREDICTED: ubiquitin D-like isoform 2 [Macaca mulatta]
gi|296201638|ref|XP_002748114.1| PREDICTED: polyubiquitin-B-like isoform 1 [Callithrix jacchus]
gi|296201640|ref|XP_002748115.1| PREDICTED: polyubiquitin-B-like isoform 2 [Callithrix jacchus]
gi|296201642|ref|XP_002748116.1| PREDICTED: polyubiquitin-B-like isoform 3 [Callithrix jacchus]
gi|297272002|ref|XP_002800358.1| PREDICTED: ubiquitin D-like [Macaca mulatta]
gi|297272004|ref|XP_002800359.1| PREDICTED: ubiquitin D-like [Macaca mulatta]
gi|297272006|ref|XP_002800360.1| PREDICTED: ubiquitin D-like [Macaca mulatta]
gi|297272009|ref|XP_002800361.1| PREDICTED: ubiquitin D-like [Macaca mulatta]
gi|297700142|ref|XP_002827118.1| PREDICTED: polyubiquitin-B isoform 2 [Pongo abelii]
gi|301617759|ref|XP_002938289.1| PREDICTED: ubiquitin D isoform 1 [Xenopus (Silurana) tropicalis]
gi|301617761|ref|XP_002938290.1| PREDICTED: ubiquitin D isoform 2 [Xenopus (Silurana) tropicalis]
gi|332226973|ref|XP_003262663.1| PREDICTED: polyubiquitin-B isoform 2 [Nomascus leucogenys]
gi|332267429|ref|XP_003282687.1| PREDICTED: polyubiquitin-B-like isoform 2 [Nomascus leucogenys]
gi|332267433|ref|XP_003282689.1| PREDICTED: polyubiquitin-B-like isoform 4 [Nomascus leucogenys]
gi|348560904|ref|XP_003466253.1| PREDICTED: polyubiquitin-B-like [Cavia porcellus]
gi|390463130|ref|XP_003732975.1| PREDICTED: polyubiquitin-B-like [Callithrix jacchus]
gi|395748608|ref|XP_003778797.1| PREDICTED: polyubiquitin-B [Pongo abelii]
gi|426349328|ref|XP_004042260.1| PREDICTED: polyubiquitin-B isoform 1 [Gorilla gorilla gorilla]
gi|426349330|ref|XP_004042261.1| PREDICTED: polyubiquitin-B isoform 2 [Gorilla gorilla gorilla]
gi|426349332|ref|XP_004042262.1| PREDICTED: polyubiquitin-B isoform 3 [Gorilla gorilla gorilla]
gi|426349334|ref|XP_004042263.1| PREDICTED: polyubiquitin-B isoform 4 [Gorilla gorilla gorilla]
gi|426349336|ref|XP_004042264.1| PREDICTED: polyubiquitin-B isoform 5 [Gorilla gorilla gorilla]
gi|426349338|ref|XP_004042265.1| PREDICTED: polyubiquitin-B isoform 6 [Gorilla gorilla gorilla]
gi|426349340|ref|XP_004042266.1| PREDICTED: polyubiquitin-B isoform 7 [Gorilla gorilla gorilla]
gi|441661901|ref|XP_004091551.1| PREDICTED: polyubiquitin-B [Nomascus leucogenys]
gi|441661906|ref|XP_004091552.1| PREDICTED: polyubiquitin-B [Nomascus leucogenys]
gi|441661909|ref|XP_004091553.1| PREDICTED: polyubiquitin-B [Nomascus leucogenys]
gi|441678730|ref|XP_004092833.1| PREDICTED: polyubiquitin-B-like [Nomascus leucogenys]
gi|441678733|ref|XP_004092834.1| PREDICTED: polyubiquitin-B-like [Nomascus leucogenys]
gi|441678738|ref|XP_004092835.1| PREDICTED: polyubiquitin-B-like [Nomascus leucogenys]
gi|302595874|sp|P0CG67.1|UBB_GORGO RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|302595875|sp|P0CG47.1|UBB_HUMAN RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|302595877|sp|P0CG65.1|UBB_PANTR RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|302595878|sp|P0CG60.1|UBB_PONPY RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|6647298|emb|CAA28495.1| ubiquitin [Homo sapiens]
gi|12653221|gb|AAH00379.1| Ubiquitin B [Homo sapiens]
gi|14424552|gb|AAH09301.1| Ubiquitin B [Homo sapiens]
gi|15451313|dbj|BAB64460.1| hypothetical protein [Macaca fascicularis]
gi|15929389|gb|AAH15127.1| Ubiquitin B [Homo sapiens]
gi|20070823|gb|AAH26301.1| Ubiquitin B [Homo sapiens]
gi|21410249|gb|AAH31027.1| Ubiquitin B [Homo sapiens]
gi|28278206|gb|AAH46123.1| Ubiquitin B [Homo sapiens]
gi|28316344|dbj|BAC56955.1| polyubiquitin B [Homo sapiens]
gi|28316346|dbj|BAC56956.1| polyubiquitin B [Pongo pygmaeus]
gi|28316348|dbj|BAC56957.1| polyubiquitin B [Pan troglodytes]
gi|28316350|dbj|BAC56958.1| polyubiquitin B [Gorilla gorilla]
gi|54697070|gb|AAV38907.1| ubiquitin B [Homo sapiens]
gi|54887368|gb|AAH38999.1| Ubiquitin B [Homo sapiens]
gi|61355410|gb|AAX41137.1| ubiquitin B [synthetic construct]
gi|61359496|gb|AAX41727.1| ubiquitin B [synthetic construct]
gi|119624906|gb|EAX04501.1| ubiquitin B, isoform CRA_a [Homo sapiens]
gi|119624907|gb|EAX04502.1| ubiquitin B, isoform CRA_a [Homo sapiens]
gi|156105183|gb|ABU49130.1| ubiquitin B [Sus scrofa]
gi|156105185|gb|ABU49131.1| ubiquitin B [Sus scrofa]
gi|281339566|gb|EFB15150.1| hypothetical protein PANDA_009728 [Ailuropoda melanoleuca]
gi|343958162|dbj|BAK62936.1| ubiquitin [Pan troglodytes]
Length = 229
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|403217874|emb|CCK72367.1| hypothetical protein KNAG_0J02880 [Kazachstania naganishii CBS
8797]
Length = 153
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|35187449|gb|AAQ84316.1| fiber polyubiquitin [Gossypium barbadense]
Length = 229
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
>gi|14596193|gb|AAK68824.1| Unknown protein [Arabidopsis thaliana]
Length = 229
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V + GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKPLPGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + + LH
Sbjct: 162 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLH 220
Query: 102 LVLRL 106
LVLRL
Sbjct: 221 LVLRL 225
>gi|256079432|ref|XP_002575991.1| ubiquitin (ribosomal protein L40) [Schistosoma mansoni]
Length = 153
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|403221030|dbj|BAM39163.1| ubiquitin [Theileria orientalis strain Shintoku]
Length = 155
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|168043709|ref|XP_001774326.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674318|gb|EDQ60828.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 457
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|66510555|ref|XP_393173.2| PREDICTED: polyubiquitin-A-like isoform 1 [Apis mellifera]
gi|328780726|ref|XP_003249849.1| PREDICTED: polyubiquitin-A-like [Apis mellifera]
Length = 761
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEASDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKTKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 670 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 727
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 728 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 687 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 745
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 746 QKESTLHLVLRL 757
>gi|82539669|ref|XP_724205.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23478774|gb|EAA15770.1| Unknown protein [Plasmodium yoelii yoelii]
Length = 329
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 86/157 (54%), Gaps = 4/157 (2%)
Query: 28 KLSNDSILI-FLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSN 86
KL+N+ +LI ++ + I + V SD+I +VK +IQ G +Q+L+F G++L
Sbjct: 20 KLANNILLIMYIFLIRKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 79
Query: 87 SRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREF 146
+ + DY + + LHLVLRL I V T+ GK VE + VK +I K E
Sbjct: 80 T-LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EG 136
Query: 147 VDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
+ Q LI G++LED R ++D + E+ +HL++R
Sbjct: 137 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 173
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 184 TLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 242
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 243 TLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAG 300
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D + E+ +HL++R
Sbjct: 301 KQLEDGRTLSDYNIQKESTLHLVLR 325
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 260 TLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 318
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 319 TLHLVLRL 326
>gi|452820028|gb|EME27076.1| ubiquitin [Galdieria sulphuraria]
Length = 306
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|426263332|emb|CCG34086.1| Polyubiquitin [uncultured eukaryote]
Length = 304
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 83/155 (53%), Gaps = 4/155 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR 189
I G++LED R ++D + E+ +HL++R +R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMR 230
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMRIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITD 169
I G++LED R ++D
Sbjct: 272 IFAGKQLEDGRTLSD 286
>gi|302762631|ref|XP_002964737.1| hypothetical protein SELMODRAFT_270468 [Selaginella moellendorffii]
gi|300166970|gb|EFJ33575.1| hypothetical protein SELMODRAFT_270468 [Selaginella moellendorffii]
Length = 535
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLADYNIQKESTLHLVLR 528
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 517
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 518 QKESTLHLVLRL 529
>gi|302784142|ref|XP_002973843.1| hypothetical protein SELMODRAFT_173723 [Selaginella moellendorffii]
gi|300158175|gb|EFJ24798.1| hypothetical protein SELMODRAFT_173723 [Selaginella moellendorffii]
Length = 457
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEEGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|197129055|gb|ACH45553.1| putative ubiquitin C variant 2 [Taeniopygia guttata]
gi|197129057|gb|ACH45555.1| putative ubiquitin C variant 2 [Taeniopygia guttata]
Length = 412
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 4/140 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ G+ VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGRTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRN 174
I G T +RN
Sbjct: 348 IFAGSWRMGAPSPTTTSRRN 367
>gi|27806505|ref|NP_776558.1| polyubiquitin-B [Bos taurus]
gi|645|emb|CAA79146.1| polyubiquitin [Bos taurus]
Length = 305
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLFDYNIQKESTLHLVLR 148
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|367006115|ref|XP_003687789.1| hypothetical protein TPHA_0K02250 [Tetrapisispora phaffii CBS 4417]
gi|357526094|emb|CCE65355.1| hypothetical protein TPHA_0K02250 [Tetrapisispora phaffii CBS 4417]
Length = 153
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|302756493|ref|XP_002961670.1| hypothetical protein SELMODRAFT_227280 [Selaginella moellendorffii]
gi|300170329|gb|EFJ36930.1| hypothetical protein SELMODRAFT_227280 [Selaginella moellendorffii]
Length = 687
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLADYNIQKESTLHLVLR 604
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 593
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 594 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 651
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 652 IFAGKQLEDGRTLADYNIQKESTLHLVLR 680
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 669
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 670 QKESTLHLVLRL 681
>gi|302822663|ref|XP_002992988.1| hypothetical protein SELMODRAFT_187148 [Selaginella moellendorffii]
gi|302825886|ref|XP_002994514.1| hypothetical protein SELMODRAFT_138728 [Selaginella moellendorffii]
gi|300137505|gb|EFJ04422.1| hypothetical protein SELMODRAFT_138728 [Selaginella moellendorffii]
gi|300139188|gb|EFJ05934.1| hypothetical protein SELMODRAFT_187148 [Selaginella moellendorffii]
Length = 229
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|168024852|ref|XP_001764949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683758|gb|EDQ70165.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 318
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVF 122
+ LHLVLRL I T+ K+
Sbjct: 290 QKESTLHLVLRLRGGMEIIEDTLASKII 317
>gi|164708|gb|AAA31133.1| poly-ubiquitin precursor, partial [Sus scrofa]
Length = 255
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 29 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 87
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 88 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 145
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 146 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 174
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 105 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 163
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 164 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 221
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 222 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 250
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 91 DYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLK 150
DY + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 8 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPD 65
Query: 151 NQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R ++D + E+ +HL++R
Sbjct: 66 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 98
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 181 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 239
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 240 QKESTLHLVLRL 251
>gi|302796783|ref|XP_002980153.1| hypothetical protein SELMODRAFT_271419 [Selaginella moellendorffii]
gi|302820321|ref|XP_002991828.1| hypothetical protein SELMODRAFT_162003 [Selaginella moellendorffii]
gi|300140366|gb|EFJ07090.1| hypothetical protein SELMODRAFT_162003 [Selaginella moellendorffii]
gi|300152380|gb|EFJ19023.1| hypothetical protein SELMODRAFT_271419 [Selaginella moellendorffii]
Length = 306
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQA 111
+ LHLVLRL QA
Sbjct: 290 QKESTLHLVLRLRGGQA 306
>gi|217074566|gb|ACJ85643.1| unknown [Medicago truncatula]
Length = 229
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ+ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQNKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|324514657|gb|ADY45941.1| Polyubiquitin-A, partial [Ascaris suum]
Length = 474
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G ++D + E+ +HL++R
Sbjct: 424 IFAG-------TLSDYNIQKESTLHLVLR 445
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G + DY +
Sbjct: 383 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGT--------LSDYNI 434
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVE 127
+ LHLVLRL I V T+ GK VE
Sbjct: 435 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 467
>gi|296478548|tpg|DAA20663.1| TPA: ubiquitin C [Bos taurus]
Length = 314
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 159 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 217
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 218 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAG 275
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D + E+ +HL++R
Sbjct: 276 KQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 7 TLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 65
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAG 123
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D + E+ +HL++R
Sbjct: 124 KQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 235 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 293
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 294 TLHLVLRL 301
>gi|328780728|ref|XP_003249850.1| PREDICTED: polyubiquitin-A-like [Apis mellifera]
Length = 685
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEASDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKTKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 594 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 651
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 652 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 670 QKESTLHLVLRL 681
>gi|302789426|ref|XP_002976481.1| hypothetical protein SELMODRAFT_271198 [Selaginella moellendorffii]
gi|302803592|ref|XP_002983549.1| hypothetical protein SELMODRAFT_228943 [Selaginella moellendorffii]
gi|300148792|gb|EFJ15450.1| hypothetical protein SELMODRAFT_228943 [Selaginella moellendorffii]
gi|300155519|gb|EFJ22150.1| hypothetical protein SELMODRAFT_271198 [Selaginella moellendorffii]
Length = 381
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEEGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|71033201|ref|XP_766242.1| ubiquitin [Theileria parva strain Muguga]
gi|68353199|gb|EAN33959.1| ubiquitin, putative [Theileria parva]
Length = 155
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|413926510|gb|AFW66442.1| putative ubiquitin family protein, partial [Zea mays]
Length = 216
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
>gi|297847850|ref|XP_002891806.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337648|gb|EFH68065.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 384
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 81 IFIKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 139
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 140 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 197
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 198 IFAGKQLEDGRTLADYNIQKESTLHLVLR 226
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I ++K +IQ G +Q+L+F G++L + + DY +
Sbjct: 233 IFVKTLTGKTITLEVESSDTIDNLKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 291
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 292 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 349
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 350 IFAGKQLEDGRTLADYNIQKESTLHLVLR 378
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 3/140 (2%)
Query: 44 VIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLV 103
I + V SD+I +VK +IQ G + +Q+L+F G+ L + DY + ++LHL
Sbjct: 14 TITLDVESSDTINNVKAKIQDIEGIPLDQQRLIFSGK-LLDDGRTLADYSIQKESILHLA 72
Query: 104 LRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELED 163
LRL I + T+ GK VE + VK +I K E + Q LI G++LED
Sbjct: 73 LRLRGGMQIFIKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLED 130
Query: 164 QRLITDICKRNEAVIHLLVR 183
R + D + E+ +HL++R
Sbjct: 131 GRTLADYNIQKESTLHLVLR 150
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 309 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 367
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 368 QKESTLHLVLRL 379
>gi|268571891|ref|XP_002641176.1| C. briggsae CBR-UBQ-1 protein [Caenorhabditis briggsae]
Length = 762
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 670 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 727
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 728 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 687 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 745
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 746 QKESTLHLVLRL 757
>gi|444791|prf||1908225A ubiquitin
Length = 305
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--ECIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLFDYNIQKESTLHLVLR 148
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|375298514|dbj|BAL61084.1| polyubiqutin [Dianthus caryophyllus]
gi|375298516|dbj|BAL61085.1| polyubiquitin [Dianthus caryophyllus]
gi|375298518|dbj|BAL61086.1| polyubiquitin [Dianthus caryophyllus]
Length = 381
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|302822499|ref|XP_002992907.1| hypothetical protein SELMODRAFT_162680 [Selaginella moellendorffii]
gi|302825882|ref|XP_002994512.1| hypothetical protein SELMODRAFT_163447 [Selaginella moellendorffii]
gi|300137503|gb|EFJ04420.1| hypothetical protein SELMODRAFT_163447 [Selaginella moellendorffii]
gi|300139252|gb|EFJ05996.1| hypothetical protein SELMODRAFT_162680 [Selaginella moellendorffii]
Length = 382
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQA 111
+ LHLVLRL QA
Sbjct: 366 QKESTLHLVLRLRGGQA 382
>gi|168005465|ref|XP_001755431.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693559|gb|EDQ79911.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
>gi|168016982|ref|XP_001761027.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687713|gb|EDQ74094.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 533
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLADYNIQKESTLHLVLR 528
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 517
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 518 QKESTLHLVLRL 529
>gi|25151716|ref|NP_741157.1| Protein UBQ-1, isoform a [Caenorhabditis elegans]
gi|302595957|sp|P0CG71.1|UBIQ1_CAEEL RecName: Full=Polyubiquitin-A; Contains: RecName: Full=Ubiquitin;
Contains: RecName: Full=Ubiquitin-related; Flags:
Precursor
gi|373219552|emb|CCD68779.1| Protein UBQ-1, isoform a [Caenorhabditis elegans]
Length = 838
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 670 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 727
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 728 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 687 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 745
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 746 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 803
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 804 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 832
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 763 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 821
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 822 QKESTLHLVLRL 833
>gi|339232992|ref|XP_003381613.1| ubiquitin family protein [Trichinella spiralis]
gi|316979552|gb|EFV62333.1| ubiquitin family protein [Trichinella spiralis]
Length = 193
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDSIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R++++ + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRMLSNYNIQKESTLHLVLR 148
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + +Y +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRMLSNYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVE 127
+ LHLVLRL I+ TT+ GK VE
Sbjct: 138 QKESTLHLVLRLRGGMQISATTLTGKHITVEVE 170
>gi|226477450|emb|CAX72419.1| polyubiquitin [Schistosoma japonicum]
Length = 245
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEF 124
+ LHLVLRL I V T+ GK F
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITF 243
>gi|56199552|gb|AAV84265.1| ubiquitin [Culicoides sonorensis]
Length = 167
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 7 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 65
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAG 123
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D + E+ +HL++R
Sbjct: 124 KQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 83 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 141
Query: 99 VLHLVLRLSDLQAITVTTVCGKVF 122
LHLVLRL I V T+ GK
Sbjct: 142 TLHLVLRLRGGMQIFVKTLTGKTI 165
>gi|5912028|emb|CAB55973.1| hypothetical protein [Homo sapiens]
Length = 239
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 13 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 71
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 72 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 129
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 130 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 158
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 89 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 147
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 148 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 205
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 206 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 234
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 100 LHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGE 159
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G+
Sbjct: 1 LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGK 58
Query: 160 ELEDQRLITDICKRNEAVIHLLVR 183
+LED R ++D + E+ +HL++R
Sbjct: 59 QLEDGRTLSDYNIQKESTLHLVLR 82
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 165 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 223
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 224 QKESTLHLVLRL 235
>gi|156482|gb|AAA28154.1| polyubiquitin [Caenorhabditis elegans]
Length = 838
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 670 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 727
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 728 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 687 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 745
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 746 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 803
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + ++ +HL++R
Sbjct: 804 IFAGKQLEDGRTLSDYNIQKQSTLHLVLR 832
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 763 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 821
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 822 QKQSTLHLVLRL 833
>gi|290462837|gb|ADD24466.1| Ubiquitin [Lepeophtheirus salmonis]
Length = 229
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|209875527|ref|XP_002139206.1| ubiquitin family protein [Cryptosporidium muris RN66]
gi|209554812|gb|EEA04857.1| ubiquitin family protein [Cryptosporidium muris RN66]
Length = 155
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|3126967|gb|AAC16012.1| polyubiquitin [Elaeagnus umbellata]
Length = 458
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK QI K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESLDTIDNVKAQIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V D+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESLDTIDNVKAQIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|112983984|ref|NP_001036839.1| polyubiquitin [Bombyx mori]
gi|4587236|dbj|BAA76676.1| polyubiquitin [Bombyx mori]
Length = 913
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 670 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 727
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 728 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 763 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 821
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 822 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 879
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 880 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 908
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLENGRTLSDYNIQKESTLHLVLR 604
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 839 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 897
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 898 QKESTLHLVLRL 909
>gi|307206691|gb|EFN84646.1| Ubiquitin [Harpegnathos saltator]
Length = 686
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 594 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 651
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 652 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 670 QKESTLHLVLRL 681
>gi|225465625|ref|XP_002267452.1| PREDICTED: polyubiquitin 4-like isoform 1 [Vitis vinifera]
gi|359488113|ref|XP_003633702.1| PREDICTED: polyubiquitin 4-like isoform 2 [Vitis vinifera]
Length = 386
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|42490818|gb|AAH66197.1| Ubiquitin B [Mus musculus]
Length = 305
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSVTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLPDYNIQKESTLHLVLR 148
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V S +I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPSVTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|395836339|ref|XP_003791115.1| PREDICTED: polyubiquitin-B [Otolemur garnettii]
gi|149287178|gb|ABR23488.1| ubiquitin/40S ribosomal protein S27a [Ornithodoros parkeri]
gi|194374819|dbj|BAG62524.1| unnamed protein product [Homo sapiens]
Length = 153
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|449662449|ref|XP_004205543.1| PREDICTED: polyubiquitin-B-like isoform 1 [Hydra magnipapillata]
gi|449665888|ref|XP_002158413.2| PREDICTED: polyubiquitin-like [Hydra magnipapillata]
Length = 380
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEAADTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPADTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPADTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPADTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|350416822|ref|XP_003491120.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-A-like [Bombus
impatiens]
Length = 611
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 81/151 (53%), Gaps = 6/151 (3%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGF--FVKKQKLVFEGRELARSNSRVRDY 92
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY
Sbjct: 459 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPRSPDQQRLIFAGKQLEDGRT-LSDY 517
Query: 93 GLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQ 152
+ + LHLVLRL I V T+ GK VE + VK +I K E + Q
Sbjct: 518 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQ 575
Query: 153 ELICDGEELEDQRLITDICKRNEAVIHLLVR 183
LI G++LED R ++D + E+ +HL++R
Sbjct: 576 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 606
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 537 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 595
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 596 QKESTLHLVLRL 607
>gi|168005217|ref|XP_001755307.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693435|gb|EDQ79787.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 305
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|168062150|ref|XP_001783045.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665429|gb|EDQ52114.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 229
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|187729698|gb|ACD31680.1| ubiquitin [Gossypium hirsutum]
Length = 305
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLPDYNIQKESTLHLVLR 300
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LPDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|111218906|gb|ABH08754.1| ubiquitin [Arabidopsis thaliana]
Length = 220
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 69 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 127
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 128 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 185
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 186 IFAGKQLEDGRTLADYNIQKESTLHLVLR 214
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 74/140 (52%), Gaps = 3/140 (2%)
Query: 44 VIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLV 103
I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + + LHLV
Sbjct: 2 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLHLV 60
Query: 104 LRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELED 163
LRL I V T+ GK VE + VK +I K E + Q LI G++LED
Sbjct: 61 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLED 118
Query: 164 QRLITDICKRNEAVIHLLVR 183
R + D + E+ +HL++R
Sbjct: 119 GRTLADYNIQKESTLHLVLR 138
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 145 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 203
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 204 QKESTLHLVLRL 215
>gi|1684857|gb|AAB36546.1| polyubiquitin [Phaseolus vulgaris]
Length = 215
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 65 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 123
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 124 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 181
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 182 IFAGKQLEDGRTLADYNIQKESTLHLVLR 210
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 73/137 (53%), Gaps = 3/137 (2%)
Query: 47 MRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRL 106
+ V SD+I +VK +IQ G +Q+L+F G++L + + DY + + LHLVLRL
Sbjct: 1 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLHLVLRL 59
Query: 107 SDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRL 166
I V T+ GK VE + VK +I K E + Q LI G++LED R
Sbjct: 60 RGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRT 117
Query: 167 ITDICKRNEAVIHLLVR 183
+ D + E+ +HL++R
Sbjct: 118 LADYNIQKESTLHLVLR 134
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 141 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 199
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 200 QKESTLHLVLRL 211
>gi|332023427|gb|EGI63670.1| Ubiquitin [Acromyrmex echinatior]
Length = 534
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 518 QKESTLHLVLRL 529
>gi|168050741|ref|XP_001777816.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670792|gb|EDQ57354.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 381
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|156552611|ref|XP_001599434.1| PREDICTED: polyubiquitin-A-like isoform 1 [Nasonia vitripennis]
gi|345487600|ref|XP_003425726.1| PREDICTED: polyubiquitin-A-like isoform 2 [Nasonia vitripennis]
Length = 913
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 670 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 727
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 728 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 763 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 821
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 822 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 879
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 880 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 908
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 839 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 897
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 898 QKESTLHLVLRL 909
>gi|308497342|ref|XP_003110858.1| CRE-UBQ-1 protein [Caenorhabditis remanei]
gi|308242738|gb|EFO86690.1| CRE-UBQ-1 protein [Caenorhabditis remanei]
Length = 920
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 693 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 751
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 752 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 809
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 810 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 838
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 769 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 827
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 828 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 885
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 886 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 914
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 79/154 (51%), Gaps = 8/154 (5%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEG-----RELARSNSRV 89
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G R+ +
Sbjct: 535 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKNNCERKQLEDGRTL 594
Query: 90 RDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDL 149
DY + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 595 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPP 652
Query: 150 KNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R ++D + E+ +HL++R
Sbjct: 653 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 686
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 82/155 (52%), Gaps = 10/155 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 I------CDGEELEDQRLITDICKRNEAVIHLLVR 183
I C+ ++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKNNCERKQLEDGRTLSDYNIQKESTLHLVLR 610
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 845 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 903
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 904 QKESTLHLVLRL 915
>gi|224160432|ref|XP_002338212.1| predicted protein [Populus trichocarpa]
gi|222871285|gb|EEF08416.1| predicted protein [Populus trichocarpa]
Length = 377
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|169635149|gb|ACA58351.1| ubiquitin-like protein [Sandersonia aurantiaca]
Length = 189
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK 142
+ LHLVLRL I V T+ GK VE + VK +I K
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK 185
>gi|164521185|gb|ABY60454.1| putative polyubiquitin [Adonis aestivalis var. palaestina]
Length = 281
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 14 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 72
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 73 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 130
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 131 IFAGKQLEDGRTLADYNIQKESTLHLVLR 159
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 166 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 224
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK 142
+ LHLVLRL I V T+ GK VE + VK +I K
Sbjct: 225 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK 272
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 1 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 58
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 59 KQLEDGRTLADYNIQKESTLHLVLR 83
>gi|16071|emb|CAA48140.1| ubiquitin [Antirrhinum majus]
Length = 296
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 146 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 204
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 205 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 262
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 263 IFAGKQLEDGRTLADYNIQKESTLHLVLR 291
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 3/142 (2%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + + LH
Sbjct: 1 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLH 59
Query: 102 LVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEEL 161
LVLRL I V T+ GK VE + VK +I K E + Q LI G++L
Sbjct: 60 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQL 117
Query: 162 EDQRLITDICKRNEAVIHLLVR 183
ED R + D + E+ +HL++R
Sbjct: 118 EDGRTLADYNIQKESTLHLVLR 139
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 222 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 280
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 281 QKESTLHLVLRL 292
>gi|602076|emb|CAA54603.1| pentameric polyubiquitin [Nicotiana tabacum]
Length = 346
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK 142
+ LHLVLRL I V T+ GK VE + VK +I K
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK 337
>gi|62083359|gb|AAX62404.1| polyubiquitin [Lysiphlebus testaceipes]
Length = 538
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFVGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 518 QKESTLHLVLRL 529
>gi|332021030|gb|EGI61419.1| Ubiquitin [Acromyrmex echinatior]
Length = 459
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|313215765|emb|CBY16339.1| unnamed protein product [Oikopleura dioica]
Length = 188
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK 142
+ LHLVLRL I V T+ GK VE + VK +I K
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK 185
>gi|307172602|gb|EFN63961.1| Ubiquitin [Camponotus floridanus]
Length = 459
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|297810399|ref|XP_002873083.1| hypothetical protein ARALYDRAFT_487095 [Arabidopsis lyrata subsp.
lyrata]
gi|297318920|gb|EFH49342.1| hypothetical protein ARALYDRAFT_487095 [Arabidopsis lyrata subsp.
lyrata]
Length = 306
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LTDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|111218908|gb|ABH08755.1| ubiquitin [Arabidopsis thaliana]
Length = 221
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 71 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 129
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 130 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 187
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 188 IFAGKQLEDGRTLADYNIQKESTLHLVLR 216
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 3/142 (2%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + + LH
Sbjct: 2 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLH 60
Query: 102 LVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEEL 161
LVLRL I V T+ GK VE + VK +I K E + Q LI G++L
Sbjct: 61 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQL 118
Query: 162 EDQRLITDICKRNEAVIHLLVR 183
ED R + D + E+ +HL++R
Sbjct: 119 EDGRTLADYNIQKESTLHLVLR 140
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 147 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 205
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 206 QKESTLHLVLRL 217
>gi|357123401|ref|XP_003563399.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-C-like [Brachypodium
distachyon]
Length = 535
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 385 IFVKTLTGKTITLXVESSDTIDNVKSKIQDKEGLPPDQQRLIFAGKQLEDGRT-LADYNI 443
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK V+ + VK +I K E Q+L
Sbjct: 444 QKXSTLHLVLRLRGGMQIFVKTLTGKTITLEVKSSDTIDNVKAKIQDK--EGTPPDQQQL 501
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 502 IFAGKQLEDGRTLADYNIQKESTLHLVLR 530
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 80/151 (52%), Gaps = 6/151 (3%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQA--ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQ 152
+ LHLVLRL Q I V T+ GK VE + VK +I K E + Q
Sbjct: 366 QKESTLHLVLRLRGGQXMQIFVKTLTGKTITLXVESSDTIDNVKSKIQDK--EGLPPDQQ 423
Query: 153 ELICDGEELEDQRLITDICKRNEAVIHLLVR 183
LI G++LED R + D + + +HL++R
Sbjct: 424 RLIFAGKQLEDGRTLADYNIQKXSTLHLVLR 454
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 461 IFVKTLTGKTITLEVKSSDTIDNVKAKIQDKEGTPPDQQQLIFAGKQLEDGRT-LADYNI 519
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 520 QKESTLHLVLRL 531
>gi|226477466|emb|CAX72427.1| polyubiquitin [Schistosoma japonicum]
Length = 170
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|16660459|gb|AAL27563.1|AF429429_1 polyubiquitin OUB1 [Olea europaea]
Length = 305
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|2760349|gb|AAB95252.1| ubiquitin [Arabidopsis thaliana]
Length = 380
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQWL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYDIQKESTLHLVLR 376
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYDI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|1800281|gb|AAB68045.1| polyubiquitin [Fragaria x ananassa]
Length = 381
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIXDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|21592581|gb|AAM64530.1| ubiquitin homolog [Arabidopsis thaliana]
Length = 229
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVL L I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLXLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|302393789|sp|P62972.2|UBIQP_XENLA RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|2118960|pir||I51568 polyubiquitin - African clawed frog (fragment)
gi|214864|gb|AAA49978.1| polyubiquitin, partial [Xenopus laevis]
Length = 167
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 18 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 76
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 77 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 134
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 135 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 163
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 98 NVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICD 157
+ LHLVLRL I V T+ GK VE + VK +I K E + Q LI
Sbjct: 4 STLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFA 61
Query: 158 GEELEDQRLITDICKRNEAVIHLLVR 183
G++LED R ++D + E+ +HL++R
Sbjct: 62 GKQLEDGRTLSDYNIQKESTLHLVLR 87
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 94 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 152
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 153 QKESTLHLVLRL 164
>gi|327356699|gb|EGE85556.1| hypothetical protein BDDG_08501 [Ajellomyces dermatitidis ATCC
18188]
Length = 333
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 183 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 241
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 242 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 299
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 300 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 328
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 111 TLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 169
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 170 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAG 227
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D + E+ +HL++R
Sbjct: 228 KQLEDGRTLSDYNIQKESTLHLVLR 252
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 32/177 (18%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V D+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVESGDTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRL----------------------SDLQAITVT------TVCGKVFEFHV 126
+ LHLVLRL + QA+T T T+ GK V
Sbjct: 62 QKESTLHLVLRLRGGMQICMSFEQVLSYIDMFYVRENQALTYTLQTVVKTLTGKTITLEV 121
Query: 127 ERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
E + VK +I K E + Q LI G++LED R ++D + E+ +HL++R
Sbjct: 122 ESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 176
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 259 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 317
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 318 QKESTLHLVLRL 329
>gi|357137122|ref|XP_003570150.1| PREDICTED: polyubiquitin 11-like [Brachypodium distachyon]
Length = 241
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|356548015|ref|XP_003542399.1| PREDICTED: polyubiquitin-A-like [Glycine max]
Length = 614
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 312 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 370
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 371 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 428
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 429 IFAGKQLEDGRTLADYNIQKESTLHLVLR 457
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 388 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 446
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 447 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 504
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 505 IFAGKQLEDGRTLADYNIQKESTLHLVLR 533
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 464 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 522
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 523 QKESTLHLVLRLRGGMQIFVKTLTGKTVTLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 580
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 581 IFAGKQLEDGRTLADYNIQKESTLHLVLR 609
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 74/140 (52%), Gaps = 3/140 (2%)
Query: 44 VIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLV 103
I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + + LHLV
Sbjct: 245 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLHLV 303
Query: 104 LRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELED 163
LRL I V T+ GK VE + VK +I K E + Q LI G++LED
Sbjct: 304 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLED 361
Query: 164 QRLITDICKRNEAVIHLLVR 183
R + D + E+ +HL++R
Sbjct: 362 GRTLADYNIQKESTLHLVLR 381
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G + + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 540 IFVKTLTGKTVTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 598
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 599 QKESTLHLVLRL 610
>gi|297840967|ref|XP_002888365.1| polyubiquitin [Arabidopsis lyrata subsp. lyrata]
gi|297334206|gb|EFH64624.1| polyubiquitin [Arabidopsis lyrata subsp. lyrata]
Length = 458
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK +E + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEIESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + + SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEIESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|242096698|ref|XP_002438839.1| hypothetical protein SORBIDRAFT_10g027030 [Sorghum bicolor]
gi|241917062|gb|EER90206.1| hypothetical protein SORBIDRAFT_10g027030 [Sorghum bicolor]
Length = 229
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + ++ +HL++R
Sbjct: 196 IFAGKQLEDGRTLADYNIQKDSTLHLVLR 224
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKDSTLHLVLRL 225
>gi|225711930|gb|ACO11811.1| Ubiquitin [Lepeophtheirus salmonis]
Length = 229
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEGGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKEPTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEGGRTLSDYNIQKESTLHLVLR 148
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|4150914|emb|CAA72800.1| polyubiquitin precursor [Suberites domuncula]
Length = 147
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 1 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 59
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 60 TLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAG 117
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D + E+ +HL++R
Sbjct: 118 KQLEDGRTLSDYNIQKESTLHLVLR 142
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 73 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 131
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 132 QKESTLHLVLRL 143
>gi|23397122|gb|AAN31845.1| putative polyubiquitin (UBQ10) [Arabidopsis thaliana]
Length = 464
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK 142
+ LHLVLRL I V T+ GK VE + VK +I K
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK 413
>gi|375298520|dbj|BAL61087.1| polyubiquitin [Dianthus caryophyllus]
Length = 229
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|363992286|gb|AEW46688.1| polyubiquitin, partial [Ulva linza]
Length = 226
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|328792775|ref|XP_395993.4| PREDICTED: polyubiquitin-A-like isoform 1 [Apis mellifera]
Length = 795
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 670 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 727
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 728 IFAGKQLEDGRTLLDYNIQKESTLHLVLR 756
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 687 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLL-DYNI 745
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 746 QKESTLHLVLRL 757
>gi|229577230|ref|NP_001153331.1| ubiquitin C-like [Nasonia vitripennis]
Length = 610
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 594 QKESTLHLVLRL 605
>gi|212851|gb|AAA49129.1| ubiquitin polyprotein (heat shock related), partial [Gallus gallus]
Length = 157
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 7 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 65
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 66 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 123
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 124 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 152
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 83 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 141
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 142 QKESTLHLVLRL 153
>gi|356537527|ref|XP_003537278.1| PREDICTED: polyubiquitin 3-like [Glycine max]
Length = 306
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|192910770|gb|ACF06493.1| UBQ4 [Elaeis guineensis]
Length = 384
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|147834511|emb|CAN71997.1| hypothetical protein VITISV_004025 [Vitis vinifera]
Length = 538
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLVDYNIQKESTLHLILR 528
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I ++V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLKVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ K VE VK +I K E + Q L
Sbjct: 62 QKDSTLHLVLRLRGGMQIFVKTLTRKTITLEVESSDTTDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 73/140 (52%), Gaps = 3/140 (2%)
Query: 44 VIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLV 103
I + V SD+ +VK +IQ G +Q+L+F G++L + + DY + + LHLV
Sbjct: 88 TITLEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLHLV 146
Query: 104 LRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELED 163
LRL I V T+ GK VE + VK +I K E + Q LI G++LED
Sbjct: 147 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLED 204
Query: 164 QRLITDICKRNEAVIHLLVR 183
R + D + E+ +HL++R
Sbjct: 205 GRTLADYNIQKESTLHLVLR 224
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + V DY +
Sbjct: 459 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLV-DYNI 517
Query: 95 ADGNVLHLVLRL 106
+ LHL+LRL
Sbjct: 518 QKESTLHLILRL 529
>gi|15982787|gb|AAL09741.1| AT4g05320/C17L7_240 [Arabidopsis thaliana]
Length = 381
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G++LED R + D + E+ +HL++
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVL 147
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|449662451|ref|XP_004205544.1| PREDICTED: polyubiquitin-B-like isoform 2 [Hydra magnipapillata]
Length = 304
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPADTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPADTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|902584|gb|AAC49013.1| polyubiquitin containing 7 ubiquitin monomers [Zea mays]
Length = 533
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLADYNIQKESTLHLVLR 528
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLV+RL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVVRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 517
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 518 QKESTLHLVLRL 529
>gi|374412404|gb|AEZ49160.1| polyubiquitin, partial [Wolffia australiana]
Length = 281
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 23 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 81
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 82 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 139
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 140 IFAGKQLEDGRTLADYNIQKESTLHLVLR 168
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 175 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 233
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK 142
+ LHLVLRL I V T+ GK V + VK +I K
Sbjct: 234 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVASSDTIDNVKAKIQDK 281
>gi|328856761|gb|EGG05881.1| hypothetical protein MELLADRAFT_87680 [Melampsora larici-populina
98AG31]
Length = 535
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLADYNIQKESTLHLVLR 528
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 517
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 518 QKESTLHLVLRL 529
>gi|116312012|emb|CAJ86369.1| OSIGBa0117N13.13 [Oryza sativa Indica Group]
gi|116312055|emb|CAJ86419.1| H0303G06.8 [Oryza sativa Indica Group]
gi|125549841|gb|EAY95663.1| hypothetical protein OsI_17529 [Oryza sativa Indica Group]
Length = 381
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|4150898|emb|CAA76577.1| polyubiquitin [Suberites domuncula]
Length = 305
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|578546|emb|CAA84814.1| ubiquitin [Tetrahymena pyriformis]
Length = 379
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V ++D+I ++K +IQ G +Q+L+F G++L + V DY + +
Sbjct: 83 TLTGKTITLDVAQTDNIENIKAKIQDKEGIPSDQQRLIFAGKQLEDGRT-VSDYNIQKES 141
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL + V T+ GK V N+ +K +I K E + Q LI G
Sbjct: 142 TLHLVLRLRGGMQVFVKTLTGKTITLEVNSSDNIESIKSKIQDK--EGIPSDQQRLIFAG 199
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R I+D + E+ +HL++R
Sbjct: 200 KQLEDGRNISDYNIQKESTLHLVLR 224
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + V DY + +
Sbjct: 235 TLTGKTITLDVDSSDNIENVKAKIQDKEGIPSDQQRLIFAGKQLEDGRT-VSDYNIQKES 293
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK + N+ VK +I K E + Q LI G
Sbjct: 294 TLHLVLRLRGGMQIFVKTLTGKTLTLDINSTDNIENVKAKIQDK--EGIPTDQQRLIFAG 351
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D E+ +HL++R
Sbjct: 352 KQLEDGRTVSDYNISKESTLHLVLR 376
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G + + V +D+I ++K +IQ G +Q+L+F G++L + V DY +
Sbjct: 3 IFVKTLTGKTVTLDVASTDNIENIKQKIQDKEGIPSDQQRLIFAGKQLEEGRT-VSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ +HLVLRL + V T+ GK V + N+ +K +I K E + Q L
Sbjct: 62 QKESTVHLVLRLRGGMQVFVKTLTGKTITLDVAQTDNIENIKAKIQDK--EGIPSDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTVSDYNIQKESTLHLVLR 148
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G + + + +D+I +VK +IQ G +Q+L+F G++L + V DY +
Sbjct: 307 IFVKTLTGKTLTLDINSTDNIENVKAKIQDKEGIPTDQQRLIFAGKQLEDGRT-VSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ + LHLVLRL
Sbjct: 366 SKESTLHLVLRL 377
>gi|6934302|gb|AAF31707.1|AF221858_1 polyubiquitin [Euphorbia esula]
Length = 215
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 65 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 123
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 124 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 181
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 182 IFAGKQLEDGRTLADYNIQKESTLHLVLR 210
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 73/137 (53%), Gaps = 3/137 (2%)
Query: 47 MRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRL 106
+ V SD+I +VK +IQ G +Q+L+F G++L + + DY + + LHLVLRL
Sbjct: 1 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLHLVLRL 59
Query: 107 SDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRL 166
I V T+ GK VE + VK +I K E + Q LI G++LED R
Sbjct: 60 RGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRT 117
Query: 167 ITDICKRNEAVIHLLVR 183
+ D + E+ +HL++R
Sbjct: 118 LADYNIQKESTLHLVLR 134
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 141 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 199
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 200 QKESTLHLVLRL 211
>gi|403366242|gb|EJY82919.1| Ubiquitin [Oxytricha trifallax]
Length = 379
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 73/139 (52%), Gaps = 4/139 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKR 173
I G++LED R ++D R
Sbjct: 272 IFAGKQLEDGRTLSDYTSR 290
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 75/149 (50%), Gaps = 5/149 (3%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY
Sbjct: 231 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDY-T 288
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ + AI V T+ GK VE + VK +I K E + Q L
Sbjct: 289 SRKIYSSFGPQTQRWYAIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 346
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 347 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 375
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 306 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 364
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 365 QKESTLHLVLRL 376
>gi|241740196|gb|ACS68205.1| ubiquitin 10.2 [Brassica napus]
Length = 381
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|151935411|gb|ABS18744.1| ubiqutin ligase-like protein [Oryza sativa Japonica Group]
gi|326518380|dbj|BAJ88219.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 229
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|224286458|gb|ACN40936.1| unknown [Picea sitchensis]
Length = 458
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|118484244|gb|ABK94002.1| unknown [Populus trichocarpa]
Length = 305
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 80/154 (51%), Gaps = 14/154 (9%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + L
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT------L 56
Query: 95 ADGNV-----LHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDL 149
AD N+ LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 57 ADNNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPP 114
Query: 150 KNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R + D + E+ +HL++R
Sbjct: 115 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|111218904|gb|ABH08753.1| ubiquitin [Arabidopsis thaliana]
Length = 219
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 69 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 127
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 128 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 185
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 186 IFAGKQLEDGRTLADYNIQKESTLHLVLR 214
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 74/140 (52%), Gaps = 3/140 (2%)
Query: 44 VIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLV 103
I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + + LHLV
Sbjct: 2 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLHLV 60
Query: 104 LRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELED 163
LRL I V T+ GK VE + VK +I K E + Q LI G++LED
Sbjct: 61 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLED 118
Query: 164 QRLITDICKRNEAVIHLLVR 183
R + D + E+ +HL++R
Sbjct: 119 GRTLADYNIQKESTLHLVLR 138
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 145 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 203
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 204 QKESTLHLVLRL 215
>gi|28189839|dbj|BAC56534.1| similar to polyubiquitin [Bos taurus]
Length = 157
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 7 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 65
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 66 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 123
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 124 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 152
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 83 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 141
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 142 QKESTLHLVLRL 153
>gi|302595954|sp|P0CG84.1|UBI4P_NICSY RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|170354|gb|AAA34124.1| pentameric polyubiquitin, partial [Nicotiana sylvestris]
Length = 377
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 151 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 209
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 210 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 267
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 268 IFAGKQLEDGRTLADYNIQKESTLHLVLR 296
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 227 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 285
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 286 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 343
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 344 IFAGKQLEDGRTLADYNIQKESTLHLVLR 372
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 3 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 61
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 62 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 119
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 120 KQLEDGRTLADYNIQKESTLHLVLR 144
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 303 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 361
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 362 QKESTLHLVLRL 373
>gi|302596001|sp|Q58G87.2|UBQ3_ORYSJ RecName: Full=Polyubiquitin 3; Contains: RecName:
Full=Ubiquitin-related; Contains: RecName:
Full=Ubiquitin; Flags: Precursor
gi|39546234|emb|CAE04243.3| OSJNBa0089N06.4 [Oryza sativa Japonica Group]
gi|125591721|gb|EAZ32071.1| hypothetical protein OsJ_16259 [Oryza sativa Japonica Group]
Length = 381
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|358336555|dbj|GAA55031.1| ubiquitin C [Clonorchis sinensis]
Length = 228
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|401412470|ref|XP_003885682.1| Ubiquitin, related [Neospora caninum Liverpool]
gi|325120102|emb|CBZ55656.1| Ubiquitin, related [Neospora caninum Liverpool]
Length = 535
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 518 QKESTLHLVLRL 529
>gi|297812245|ref|XP_002874006.1| hypothetical protein ARALYDRAFT_488966 [Arabidopsis lyrata subsp.
lyrata]
gi|297319843|gb|EFH50265.1| hypothetical protein ARALYDRAFT_488966 [Arabidopsis lyrata subsp.
lyrata]
Length = 382
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 7 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 65
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 66 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 123
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 124 KQLEDGRTLADYNIQKESTLHLVLR 148
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|357475981|ref|XP_003608276.1| Ubiquitin [Medicago truncatula]
gi|355509331|gb|AES90473.1| Ubiquitin [Medicago truncatula]
Length = 533
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLADYNIQKESTLHLVLR 528
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +I G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKILDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 517
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 518 QKESTLHLVLRL 529
>gi|356565543|ref|XP_003550999.1| PREDICTED: polyubiquitin-C-like [Glycine max]
Length = 533
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +I+ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDSIENVKAKIEEKEGIPPDQQRLIFAGKQLEDGRT-LEDYEI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I +K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKAKIQEK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED+R + D + E+ +HL++R
Sbjct: 500 IFAGKQLEDERTLEDYDIQKESTLHLVLR 528
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I +K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIEEK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLEDYEIQKESTLHLVLR 452
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEGSDTIENVKAKIQEKEGIPPDQQRLIFAGKQLEDERT-LEDYDI 517
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 518 QKESTLHLVLRL 529
>gi|302143601|emb|CBI22354.3| unnamed protein product [Vitis vinifera]
Length = 771
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 48 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 106
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 107 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 164
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 165 KQLEDGRTLADYNIQKESTLHLVLR 189
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 124 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 182
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 183 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 240
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 241 KQLEDGRTLADYNIQKESTLHLVLR 265
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 200 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 258
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 259 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 316
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 317 KQLEDGRTLADYNIQKESTLHLVLR 341
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 416 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 474
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 475 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 532
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 533 KQLEDGRTLADYNIQKESTLHLVLR 557
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 568 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 626
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 627 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 684
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 685 KQLEDGRTLADYNIQKESTLHLVLR 709
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 9/106 (8%)
Query: 78 EGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQ 137
+GR LA DY + + LHLVLRL I V T+ GK VE + VK
Sbjct: 17 DGRTLA-------DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 69
Query: 138 QIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
+I K E + Q LI G++LED R + D + E+ +HL++R
Sbjct: 70 KIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 113
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 276 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 334
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 335 TLHLVLRL 342
>gi|224116110|ref|XP_002317213.1| predicted protein [Populus trichocarpa]
gi|118487986|gb|ABK95814.1| unknown [Populus trichocarpa]
gi|222860278|gb|EEE97825.1| predicted protein [Populus trichocarpa]
Length = 229
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|18803|emb|CAA40323.1| polyubiquitin protein [Helianthus annuus]
Length = 334
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQI 139
+ LHLVLRL I V T+ GK VE + VK +I
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 334
>gi|355754493|gb|AET06143.1| ubiquitin [Papaver somniferum]
Length = 229
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|342298464|emb|CBY46746.1| polyubiquitin 10 protein [Lepidium campestre]
Length = 381
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD++ +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTVDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|308809920|ref|XP_003082269.1| polyubiquitin (ISS) [Ostreococcus tauri]
gi|116060737|emb|CAL57215.1| polyubiquitin (ISS) [Ostreococcus tauri]
Length = 288
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 55 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 113
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 114 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 171
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 172 IFAGKQLEDGRTLADYNIQKESTLHLVLR 200
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 68/129 (52%), Gaps = 4/129 (3%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 131 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 189
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 190 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 247
Query: 155 ICDGEELED 163
I G++LED
Sbjct: 248 IFAGKQLED 256
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Query: 66 NGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFH 125
+G +Q+L+F G++L + + DY + + LHLVLRL I V T+ GK
Sbjct: 10 DGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 68
Query: 126 VERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
VE + VK +I K E + Q LI G++LED R + D + E+ +HL++R
Sbjct: 69 VESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 124
>gi|4150912|emb|CAA72799.1| polyubiquitin precursor [Suberites domuncula]
Length = 381
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|224321|prf||1101405A ubiquitin precursor
Length = 191
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 41 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 99
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 100 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 157
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 158 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 186
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
Query: 72 KQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRN 131
+Q+L+F G++L + + DY + + LHLVLRL I V T+ GK VE
Sbjct: 2 QQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 60
Query: 132 VGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
+ VK +I K E + Q LI G++LED R ++D + E+ +HL++R
Sbjct: 61 IDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 110
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 117 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 175
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 176 QKESTLHLVLRL 187
>gi|413926507|gb|AFW66439.1| putative ubiquitin family protein [Zea mays]
Length = 297
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + +E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS----------DIQDKEGIPPDQQRL 263
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 264 IFAGKQLEDGRTLADYNIQKESTLHLVLR 292
>gi|402586659|gb|EJW80596.1| polyubiquitin, partial [Wuchereria bancrofti]
Length = 198
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 48 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 106
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 107 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 164
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 165 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 193
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Query: 67 GFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHV 126
G +Q+L+F G++L + + DY + + LHLVLRL I V T+ GK V
Sbjct: 4 GIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 62
Query: 127 ERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
E + VK +I K E + Q LI G++LED R ++D + E+ +HL++R
Sbjct: 63 EASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 117
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 124 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 182
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 183 QKESTLHLVLRL 194
>gi|356548680|ref|XP_003542728.1| PREDICTED: polyubiquitin-C-like isoform 1 [Glycine max]
gi|356548682|ref|XP_003542729.1| PREDICTED: polyubiquitin-C-like isoform 2 [Glycine max]
Length = 533
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLADYNIQKESTLHLVLR 528
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 517
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 518 QKESTLHLVLRL 529
>gi|149391359|gb|ABR25697.1| polyubiquitin containing 7 ubiquitin monomers [Oryza sativa Indica
Group]
Length = 201
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 51 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 109
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 110 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 167
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 168 IFAGKQLEDGRTLADYNIQKESTLHLVLR 196
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Query: 61 RIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGK 120
+IQ G +Q+L+F G++L + + DY + + LHLVLRL I V T+ GK
Sbjct: 1 KIQDKEGIPPDQQRLIFAGKQLEDGRT-LXDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 59
Query: 121 VFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHL 180
VE + VK +I K E + Q LI G++LED R + D + E+ +HL
Sbjct: 60 TITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 117
Query: 181 LVR 183
++R
Sbjct: 118 VLR 120
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 127 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 185
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 186 QKESTLHLVLRL 197
>gi|312160|emb|CAA51679.1| ubiquitin [Solanum lycopersicum]
Length = 534
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLADYNIQKESTLHLVLR 528
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 74/140 (52%), Gaps = 3/140 (2%)
Query: 44 VIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLV 103
I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + + LHLV
Sbjct: 240 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLHLV 298
Query: 104 LRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELED 163
LRL I V T+ GK VE + VK +I K E + Q LI G++LED
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLED 356
Query: 164 QRLITDICKRNEAVIHLLVR 183
R + D + E+ +HL++R
Sbjct: 357 GRTLADYNIQKESTLHLVLR 376
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ K VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTRKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 517
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 518 QKESTLHLVLRL 529
>gi|6118549|gb|AAF04147.1| ubiquitin precursor [Hevea brasiliensis]
Length = 381
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLGVESSDTIDNVKAKIQDK--EGIPPDQQRF 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+ +F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLGVESSDTIDNVKAKIQDKEGIPPDQQRFIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G L + D + E+ +HL++R
Sbjct: 196 IFAGSSLRMVAPLADYNIQKESTLHLVLR 224
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|393912432|gb|EJD76736.1| polyubiquitin, variant 1 [Loa loa]
Length = 381
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|325181623|emb|CCA16073.1| polyubiquitin putative [Albugo laibachii Nc14]
Length = 538
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIDNVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLADYNIQKESTLHLVLR 528
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 517
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 518 QKESTLHLVLRL 529
>gi|331236894|ref|XP_003331105.1| polyubiquitin-A [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
gi|309310095|gb|EFP86686.1| polyubiquitin-A [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
Length = 609
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLADYNIQKESTLHLVLR 604
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 593
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 594 QKESTLHLVLRL 605
>gi|225465609|ref|XP_002266370.1| PREDICTED: polyubiquitin 4-like [Vitis vinifera]
Length = 383
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|195435796|ref|XP_002065865.1| GK20481 [Drosophila willistoni]
gi|194161950|gb|EDW76851.1| GK20481 [Drosophila willistoni]
Length = 611
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 594 QKESTLHLVLRL 605
>gi|155965254|gb|ABU40645.1| polyubiquitin [Triticum aestivum]
Length = 380
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|145352566|ref|XP_001420612.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580847|gb|ABO98905.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 381
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|2760345|gb|AAB95250.1| ubiquitin [Arabidopsis thaliana]
Length = 304
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQRESTLHLVLR 148
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|18420267|ref|NP_568397.1| polyubiquitin 4 [Arabidopsis thaliana]
gi|297826781|ref|XP_002881273.1| hypothetical protein ARALYDRAFT_482268 [Arabidopsis lyrata subsp.
lyrata]
gi|302595977|sp|P0CH32.1|UBQ4_ARATH RecName: Full=Polyubiquitin 4; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|17678|emb|CAA31331.1| unnamed protein product [Arabidopsis thaliana]
gi|987519|gb|AAB53929.1| polyubiquitin [Arabidopsis thaliana]
gi|297327112|gb|EFH57532.1| hypothetical protein ARALYDRAFT_482268 [Arabidopsis lyrata subsp.
lyrata]
gi|332005484|gb|AED92867.1| polyubiquitin 4 [Arabidopsis thaliana]
gi|226499|prf||1515347A poly-ubiquitin
Length = 382
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|255081913|ref|XP_002508175.1| ubiquitin [Micromonas sp. RCC299]
gi|303285332|ref|XP_003061956.1| ubiquitin [Micromonas pusilla CCMP1545]
gi|226456367|gb|EEH53668.1| ubiquitin [Micromonas pusilla CCMP1545]
gi|226523451|gb|ACO69433.1| ubiquitin [Micromonas sp. RCC299]
Length = 381
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|115460714|ref|NP_001053957.1| Os04g0628100 [Oryza sativa Japonica Group]
gi|113565528|dbj|BAF15871.1| Os04g0628100 [Oryza sativa Japonica Group]
Length = 392
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 170 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 228
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 229 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 286
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 287 KQLEDGRTLADYNIQKESTLHLVLR 311
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 246 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 304
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 305 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 362
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 363 KQLEDGRTLADYNIQKESTLHLVLR 387
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 18 TLTGKTITLEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 76
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 77 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 134
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 135 KQLEDGRTLADYNIQKESTLHLVLR 159
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 322 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 380
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 381 TLHLVLRL 388
>gi|57282601|emb|CAD27944.1| polyubiquitin-like [Oryza sativa]
Length = 219
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 13/209 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVSIEATELN 207
I G++LED R + D + E+ +HL++R ++ K + + E S +
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 179
Query: 208 EKGADVVGEHQFET--LFMGYQIRERKLL 234
K D G HQ +F G Q+ + + L
Sbjct: 180 AKIQDKEGIHQTSKRLIFAGKQLEDGRTL 208
>gi|30679945|ref|NP_851029.1| polyubiquitin 3 [Arabidopsis thaliana]
gi|30679951|ref|NP_568112.2| polyubiquitin 3 [Arabidopsis thaliana]
gi|79326803|ref|NP_001031824.1| polyubiquitin 3 [Arabidopsis thaliana]
gi|122237441|sp|Q1EC66.1|UBQ3_ARATH RecName: Full=Polyubiquitin 3; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|7413601|emb|CAB86091.1| polyubiquitin (ubq3) [Arabidopsis thaliana]
gi|9757775|dbj|BAB08384.1| polyubiquitin [Arabidopsis thaliana]
gi|27311629|gb|AAO00780.1| polyubiquitin (UBQ3) [Arabidopsis thaliana]
gi|108385299|gb|ABF85770.1| At5g03240 [Arabidopsis thaliana]
gi|222423646|dbj|BAH19791.1| AT5G03240 [Arabidopsis thaliana]
gi|332003191|gb|AED90574.1| polyubiquitin 3 [Arabidopsis thaliana]
gi|332003192|gb|AED90575.1| polyubiquitin 3 [Arabidopsis thaliana]
gi|332003193|gb|AED90576.1| polyubiquitin 3 [Arabidopsis thaliana]
Length = 306
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|428672795|gb|EKX73708.1| ubiquitin family member protein [Babesia equi]
Length = 155
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|240255756|ref|NP_849300.4| polyubiquitin 10 [Arabidopsis thaliana]
gi|240255762|ref|NP_567291.4| polyubiquitin 10 [Arabidopsis thaliana]
gi|240255764|ref|NP_001078353.4| polyubiquitin 10 [Arabidopsis thaliana]
gi|224132654|ref|XP_002327848.1| predicted protein [Populus trichocarpa]
gi|449433926|ref|XP_004134747.1| PREDICTED: polyubiquitin-like isoform 1 [Cucumis sativus]
gi|449433928|ref|XP_004134748.1| PREDICTED: polyubiquitin-like isoform 2 [Cucumis sativus]
gi|302393785|sp|P69322.2|UBIQP_PEA RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|20589|emb|CAA34886.1| unnamed protein product [Pisum sativum]
gi|4115339|gb|AAD03344.1| ubiquitin [Pisum sativum]
gi|15450661|gb|AAK96602.1| AT4g05320/C17L7_240 [Arabidopsis thaliana]
gi|49532982|dbj|BAD26592.1| polyubiquitin [Populus nigra]
gi|82409051|gb|ABB73307.1| ubiquitin [Lotus japonicus]
gi|118481117|gb|ABK92512.1| unknown [Populus trichocarpa]
gi|118482690|gb|ABK93264.1| unknown [Populus trichocarpa]
gi|118488167|gb|ABK95903.1| unknown [Populus trichocarpa]
gi|118488391|gb|ABK96012.1| unknown [Populus trichocarpa]
gi|118488630|gb|ABK96127.1| unknown [Populus trichocarpa]
gi|217874292|gb|ACK56276.1| ubiquitin [Populus trichocarpa]
gi|222837257|gb|EEE75636.1| predicted protein [Populus trichocarpa]
gi|332657101|gb|AEE82501.1| polyubiquitin 10 [Arabidopsis thaliana]
gi|332657104|gb|AEE82504.1| polyubiquitin 10 [Arabidopsis thaliana]
gi|332657105|gb|AEE82505.1| polyubiquitin 10 [Arabidopsis thaliana]
gi|226707|prf||1603402A poly-ubiquitin
Length = 381
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|326501424|dbj|BAK02501.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 457
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAEIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|296425005|ref|XP_002842034.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638291|emb|CAZ86225.1| unnamed protein product [Tuber melanosporum]
Length = 305
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKGKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKGKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKGKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKGKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|90655082|gb|ABD96088.1| polyubiquitin [Malus x domestica]
Length = 270
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 44 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 102
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 103 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 160
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 161 IFAGKQLEDGRTLADYNIQKESTLHLVLR 189
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 120 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 178
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 179 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 236
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 237 IFAGKQLEDGRTLADYNIQKESTLHLVLR 265
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
Query: 72 KQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRN 131
+Q+L+F G++L + + DY + + LHLVLRL I V T+ GK VE
Sbjct: 5 QQRLIFAGKQLEDGRT-LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 63
Query: 132 VGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
+ VK +I K E + Q LI G++LED R + D + E+ +HL++R
Sbjct: 64 IDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 113
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 196 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 254
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 255 QKESTLHLVLRL 266
>gi|28804499|dbj|BAC57955.1| polyubiquitin [Aster tripolium]
Length = 229
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|242055399|ref|XP_002456845.1| hypothetical protein SORBIDRAFT_03g043940 [Sorghum bicolor]
gi|242064116|ref|XP_002453347.1| hypothetical protein SORBIDRAFT_04g004280 [Sorghum bicolor]
gi|357148716|ref|XP_003574869.1| PREDICTED: polyubiquitin-like isoform 1 [Brachypodium distachyon]
gi|357148721|ref|XP_003574870.1| PREDICTED: polyubiquitin-like isoform 2 [Brachypodium distachyon]
gi|357148724|ref|XP_003574871.1| PREDICTED: polyubiquitin-like isoform 3 [Brachypodium distachyon]
gi|302393780|sp|P69309.2|UBIQP_AVEFA RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|320608|pir||S28426 polyubiquitin 4 - wild oat
gi|15989|emb|CAA49200.1| tetraubiquitin [Avena fatua]
gi|777758|gb|AAC37466.1| polyubiquitin [Saccharum hybrid cultivar H65-7052]
gi|25044841|gb|AAM28291.1| tetrameric ubiquitin [Ananas comosus]
gi|241928820|gb|EES01965.1| hypothetical protein SORBIDRAFT_03g043940 [Sorghum bicolor]
gi|241933178|gb|EES06323.1| hypothetical protein SORBIDRAFT_04g004280 [Sorghum bicolor]
gi|332379896|gb|AEE65379.1| ubiquitin 1 [Panicum virgatum]
gi|451854822|gb|EMD68114.1| hypothetical protein COCSADRAFT_108224 [Cochliobolus sativus
ND90Pr]
gi|452000986|gb|EMD93446.1| hypothetical protein COCHEDRAFT_1202381 [Cochliobolus
heterostrophus C5]
Length = 305
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|30679302|ref|NP_849292.1| polyubiquitin 14 [Arabidopsis thaliana]
gi|186511482|ref|NP_001118922.1| polyubiquitin 14 [Arabidopsis thaliana]
gi|240255760|ref|NP_974516.4| polyubiquitin 10 [Arabidopsis thaliana]
gi|224115232|ref|XP_002316978.1| predicted protein [Populus trichocarpa]
gi|297813891|ref|XP_002874829.1| hypothetical protein ARALYDRAFT_490155 [Arabidopsis lyrata subsp.
lyrata]
gi|356536051|ref|XP_003536554.1| PREDICTED: polyubiquitin-like isoform 1 [Glycine max]
gi|356536053|ref|XP_003536555.1| PREDICTED: polyubiquitin-like isoform 2 [Glycine max]
gi|356536055|ref|XP_003536556.1| PREDICTED: polyubiquitin-like isoform 3 [Glycine max]
gi|449458219|ref|XP_004146845.1| PREDICTED: polyubiquitin-like [Cucumis sativus]
gi|449517130|ref|XP_004165599.1| PREDICTED: polyubiquitin-like [Cucumis sativus]
gi|302393787|sp|P69325.2|UBIQP_SOYBN RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|302596002|sp|Q3E7T8.2|UBQ14_ARATH RecName: Full=Polyubiquitin 14; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|1076708|pir||S49332 polyubiquitin 4 - common sunflower
gi|25294250|pir||G85036 polyubiquitin [imported] - Arabidopsis thaliana
gi|303901|dbj|BAA03764.1| ubiquitin [Glycine max]
gi|456714|dbj|BAA05670.1| ubiquitin [Glycine max]
gi|556688|emb|CAA84440.1| seed tetraubiquitin [Helianthus annuus]
gi|994785|dbj|BAA05085.1| Ubiquitin [Glycine max]
gi|4263514|gb|AAD15340.1| putative polyubiquitin [Arabidopsis thaliana]
gi|7269774|emb|CAB77774.1| polyubiquitin [Arabidopsis thaliana]
gi|21593346|gb|AAM65295.1| polyubiquitin (UBQ14) [Arabidopsis thaliana]
gi|53850087|emb|CAH59738.1| polyubiquitin [Plantago major]
gi|222423150|dbj|BAH19554.1| AT4G02890 [Arabidopsis thaliana]
gi|222860043|gb|EEE97590.1| predicted protein [Populus trichocarpa]
gi|297320666|gb|EFH51088.1| hypothetical protein ARALYDRAFT_490155 [Arabidopsis lyrata subsp.
lyrata]
gi|332656846|gb|AEE82246.1| polyubiquitin 14 [Arabidopsis thaliana]
gi|332656847|gb|AEE82247.1| polyubiquitin 14 [Arabidopsis thaliana]
gi|332657103|gb|AEE82503.1| polyubiquitin 10 [Arabidopsis thaliana]
gi|399513942|gb|AFP43341.1| polyubiquitin [Arabidopsis thaliana]
gi|1096513|prf||2111434A tetraubiquitin
Length = 305
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|297724233|ref|NP_001174480.1| Os05g0504766 [Oryza sativa Japonica Group]
gi|242096828|ref|XP_002438904.1| hypothetical protein SORBIDRAFT_10g028020 [Sorghum bicolor]
gi|4809266|gb|AAD30173.1|AF148448_1 polyubiquitin [Sporobolus stapfianus]
gi|57863866|gb|AAW56906.1| polyubiquitin [Oryza sativa Japonica Group]
gi|125552905|gb|EAY98614.1| hypothetical protein OsI_20535 [Oryza sativa Indica Group]
gi|222632152|gb|EEE64284.1| hypothetical protein OsJ_19121 [Oryza sativa Japonica Group]
gi|241917127|gb|EER90271.1| hypothetical protein SORBIDRAFT_10g028020 [Sorghum bicolor]
gi|255676474|dbj|BAH93208.1| Os05g0504766 [Oryza sativa Japonica Group]
gi|326510917|dbj|BAJ91806.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326521968|dbj|BAK04112.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|383843954|gb|AFH53939.1| polyubiquitin 4 [Brachypodium distachyon]
gi|383843956|gb|AFH53940.1| polyubiquitin 10 [Brachypodium distachyon]
Length = 381
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|2760347|gb|AAB95251.1| ubiquitin [Arabidopsis thaliana]
Length = 456
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|356545971|ref|XP_003541406.1| PREDICTED: polyubiquitin-like [Glycine max]
Length = 269
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 46 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 104
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 105 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 162
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 163 KQLEDGRTLADYNIQKESTLHLVLR 187
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 122 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 180
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 181 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 238
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 239 KQLEDGRTLADYNIQKESTLHLVLR 263
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 198 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 256
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 257 TLHLVLRL 264
>gi|326495764|dbj|BAJ85978.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509329|dbj|BAJ91581.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 305
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|68160568|gb|AAY86773.1| polyubiquitin [Noccaea caerulescens]
Length = 382
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|16660462|gb|AAL27564.1|AF429430_1 polyubiquitin OUB2 [Olea europaea]
Length = 457
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|4115337|gb|AAD03343.1| ubiquitin [Pisum sativum]
Length = 457
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|18412785|ref|NP_567286.1| ubiquitin 11 [Arabidopsis thaliana]
gi|30679296|ref|NP_849291.1| polyubiquitin 14 [Arabidopsis thaliana]
gi|79325001|ref|NP_001031585.1| ubiquitin 11 [Arabidopsis thaliana]
gi|186511479|ref|NP_567247.2| polyubiquitin 14 [Arabidopsis thaliana]
gi|186511546|ref|NP_001118936.1| ubiquitin 11 [Arabidopsis thaliana]
gi|224078711|ref|XP_002305607.1| predicted protein [Populus trichocarpa]
gi|224169339|ref|XP_002339256.1| predicted protein [Populus trichocarpa]
gi|302595976|sp|P0CH33.1|UBQ11_ARATH RecName: Full=Polyubiquitin 11; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|5732081|gb|AAD48980.1|AF162444_12 contains similarity to Pfam family PF00240 - Ubiquitin family;
score=526.5, E=1.9e-154, N=3 [Arabidopsis thaliana]
gi|3882081|emb|CAA10056.1| polyubiquitin [Vicia faba]
gi|7267264|emb|CAB81047.1| AT4g05050 [Arabidopsis thaliana]
gi|12583569|emb|CAC27335.1| putative polyubiquitin [Picea abies]
gi|15450587|gb|AAK96565.1| AT4g05050/T32N4_13 [Arabidopsis thaliana]
gi|15810026|gb|AAL06940.1| AT4g05050/T32N4_13 [Arabidopsis thaliana]
gi|15982846|gb|AAL09770.1| AT4g05050/T32N4_13 [Arabidopsis thaliana]
gi|20466093|gb|AAM19968.1| AT4g05050/T32N4_13 [Arabidopsis thaliana]
gi|24899675|gb|AAN65052.1| Unknown protein [Arabidopsis thaliana]
gi|56481667|gb|AAV92464.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481669|gb|AAV92465.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481671|gb|AAV92466.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481673|gb|AAV92467.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481675|gb|AAV92468.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481677|gb|AAV92469.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481679|gb|AAV92470.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481681|gb|AAV92471.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481683|gb|AAV92472.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481685|gb|AAV92473.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481687|gb|AAV92474.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481689|gb|AAV92475.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481691|gb|AAV92476.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481693|gb|AAV92477.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481695|gb|AAV92478.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481697|gb|AAV92479.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481699|gb|AAV92480.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481701|gb|AAV92481.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481703|gb|AAV92482.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481705|gb|AAV92483.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481707|gb|AAV92484.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481709|gb|AAV92485.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481711|gb|AAV92486.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481713|gb|AAV92487.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481715|gb|AAV92488.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481717|gb|AAV92489.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481719|gb|AAV92490.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|110740912|dbj|BAE98552.1| hypothetical protein [Arabidopsis thaliana]
gi|222848571|gb|EEE86118.1| predicted protein [Populus trichocarpa]
gi|222874764|gb|EEF11895.1| predicted protein [Populus trichocarpa]
gi|332656844|gb|AEE82244.1| polyubiquitin 14 [Arabidopsis thaliana]
gi|332656845|gb|AEE82245.1| polyubiquitin 14 [Arabidopsis thaliana]
gi|332657068|gb|AEE82468.1| ubiquitin 11 [Arabidopsis thaliana]
gi|332657069|gb|AEE82469.1| ubiquitin 11 [Arabidopsis thaliana]
gi|332657070|gb|AEE82470.1| ubiquitin 11 [Arabidopsis thaliana]
gi|399513946|gb|AFP43343.1| polyubiquitin [Arabidopsis thaliana]
Length = 229
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|53850091|emb|CAH59740.1| polyubiquitin [Plantago major]
Length = 305
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|413935668|gb|AFW70219.1| polyubiquitin-like protein [Zea mays]
Length = 502
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 352 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 410
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 411 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 468
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 469 IFAGKQLEDGRTLADYNIQKESTLHLVLR 497
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 82/192 (42%), Gaps = 45/192 (23%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKG----------- 143
+ LHLVLRL I V T+ GK VE + VK +I K+
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQKESTLHLVLRLRGG 349
Query: 144 --------------------------------REFVDLKNQELICDGEELEDQRLITDIC 171
+E + Q LI G++LED R + D
Sbjct: 350 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 409
Query: 172 KRNEAVIHLLVR 183
+ E+ +HL++R
Sbjct: 410 IQKESTLHLVLR 421
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 428 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 486
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 487 QKESTLHLVLRL 498
>gi|403330856|gb|EJY64339.1| Putative ubiquitin C variant 2 [Oxytricha trifallax]
Length = 304
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|102655942|gb|AAY33920.2| polyubiquitin [Euphorbia characias]
Length = 381
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPSQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK + Q G +Q+L+F G+ L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKFQDKEGIPPDQQRLIFAGKHLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G+ LED R + D + E+ +HL++R
Sbjct: 120 IFAGKHLEDGRTLADYNIQKESTLHLVLR 148
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G+ L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKHLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++L+ R + D + E+ +HL++R
Sbjct: 196 IFAGKQLDHGRTLADYNIQKESTLHLVLR 224
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPSQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|334186377|ref|NP_001190681.1| ubiquitin 11 [Arabidopsis thaliana]
gi|357512383|ref|XP_003626480.1| Ubiquitin-like protein [Medicago truncatula]
gi|40287484|gb|AAR83856.1| hexameric polyubiquitin 6PU11 [Capsicum annuum]
gi|147802377|emb|CAN77120.1| hypothetical protein VITISV_031666 [Vitis vinifera]
gi|217074820|gb|ACJ85770.1| unknown [Medicago truncatula]
gi|332657071|gb|AEE82471.1| ubiquitin 11 [Arabidopsis thaliana]
gi|355501495|gb|AES82698.1| Ubiquitin-like protein [Medicago truncatula]
gi|388491722|gb|AFK33927.1| unknown [Medicago truncatula]
gi|388492650|gb|AFK34391.1| unknown [Lotus japonicus]
gi|399513944|gb|AFP43342.1| polyubiquitin [Arabidopsis thaliana]
Length = 153
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|18824|emb|CAA40324.1| hexaubiquitin protein [Helianthus annuus]
gi|1204096|emb|CAA40325.1| hexaubiquitin protein [Helianthus annuus]
Length = 457
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|19698797|gb|AAL91109.1| ubiquitin [Onchocerca volvulus]
Length = 305
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|302595949|sp|P0CH04.1|UBI1P_PETCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|302595950|sp|P0CH05.1|UBI2P_PETCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|288112|emb|CAA45621.1| polyubiquitin [Petroselinum crispum]
gi|288114|emb|CAA45622.1| polyubiquitin [Petroselinum crispum]
Length = 458
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|53850089|emb|CAH59739.1| polyubiquitin [Plantago major]
Length = 232
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|226763|prf||1604470A poly-ubiquitin
Length = 272
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 46 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 104
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 105 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 162
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 163 IFAGKQLEDGRTLADYNIQKESTLHLVLR 191
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 122 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 180
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 181 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 238
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 239 IFAGKQLEDGRTLADYNIQKESTLHLVLR 267
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Query: 67 GFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHV 126
G +Q+L+F G++L + + DY + + LHLVLRL I V T+ GK V
Sbjct: 2 GIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 60
Query: 127 ERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
E + VK +I K E + Q LI G++LED R + D + E+ +HL++R
Sbjct: 61 ESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 115
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 198 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 256
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 257 QKESTLHLVLRL 268
>gi|356548684|ref|XP_003542730.1| PREDICTED: polyubiquitin 10-like [Glycine max]
Length = 457
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|357513725|ref|XP_003627151.1| Ubiquitin [Medicago truncatula]
gi|327492449|dbj|BAK18565.1| polyubiquitin [Mesembryanthemum crystallinum]
gi|355521173|gb|AET01627.1| Ubiquitin [Medicago truncatula]
Length = 533
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLADYNIQKESTLHLVLR 528
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 517
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 518 QKESTLHLVLRL 529
>gi|326517545|dbj|BAK03691.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 457
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK ++Q G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|326511535|dbj|BAJ91912.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326522901|dbj|BAJ88496.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 457
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|413926514|gb|AFW66446.1| ubiquitin2 [Zea mays]
gi|413935669|gb|AFW70220.1| polyubiquitin-like protein [Zea mays]
Length = 153
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|6007448|gb|AAF00920.1|AF188158_1 ubiquitin [Oxytricha trifallax]
gi|403333775|gb|EJY66009.1| Putative ubiquitin C variant 2 [Oxytricha trifallax]
Length = 229
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|413926513|gb|AFW66445.1| ubiquitin2 [Zea mays]
Length = 535
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 5 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 63
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 64 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 121
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 122 IFAGKQLEDGRTLADYNIQKESTLHLVLR 150
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 157 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 215
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 216 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 273
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 274 IFAGKQLEDGRTLADYNIQKESTLHLVLR 302
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 309 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 367
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 368 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 425
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 426 IFAGKQLEDGRTLADYNIQKESTLHLVLR 454
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 385 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 443
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 444 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 501
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 502 IFAGKQLEDGRTLADYNIQKESTLHLVLR 530
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 461 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 519
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 520 QKESTLHLVLRL 531
>gi|340727978|ref|XP_003402310.1| PREDICTED: polyubiquitin-B-like isoform 1 [Bombus terrestris]
gi|340727980|ref|XP_003402311.1| PREDICTED: polyubiquitin-B-like isoform 2 [Bombus terrestris]
gi|340727982|ref|XP_003402312.1| PREDICTED: polyubiquitin-B-like isoform 3 [Bombus terrestris]
Length = 229
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|242062832|ref|XP_002452705.1| hypothetical protein SORBIDRAFT_04g031060 [Sorghum bicolor]
gi|241932536|gb|EES05681.1| hypothetical protein SORBIDRAFT_04g031060 [Sorghum bicolor]
Length = 459
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|384497521|gb|EIE88012.1| polyubiquitin [Rhizopus delemar RA 99-880]
Length = 231
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 119/235 (50%), Gaps = 13/235 (5%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR----KSAKVRAKPVQKDFEVSIEATELNEKG 210
I G++LED R ++D + E+ +HL++R + + K +K + ++ +EK
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGNGLEEQKKQTRKKTRCAFQS--CSEKP 177
Query: 211 ADVVGEHQF-ETLFMG-YQIRERKLLQNDLLLEPLIVESNFKLPLMIKRLISSTV 263
++G ++ ++ F +++ E L +N + E N + L+ +R ++S V
Sbjct: 178 VKIIGNCRYCQSNFCARHRLPEDHLCENLTNCKQAAYERN-SMKLLSERCVASKV 231
>gi|357123434|ref|XP_003563415.1| PREDICTED: polyubiquitin-A-like [Brachypodium distachyon]
Length = 609
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLADYNIQKESTLHLVLR 604
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 593
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 594 QKESTLHLVLRL 605
>gi|325302604|tpg|DAA34466.1| TPA_exp: ubiquitin [Amblyomma variegatum]
Length = 194
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 83/152 (54%), Gaps = 4/152 (2%)
Query: 33 SILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRD 91
++ IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + D
Sbjct: 15 TMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSD 73
Query: 92 YGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKN 151
Y + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 74 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQ 131
Query: 152 QELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R ++D + E+ +HL++R
Sbjct: 132 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 163
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 94 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 152
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVK 136
+ LHLVLRL I V T+ GK VE + VK
Sbjct: 153 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 194
>gi|307174680|gb|EFN65063.1| Ubiquitin [Camponotus floridanus]
Length = 154
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|30523391|gb|AAP31578.1| ubiquitin [Hevea brasiliensis]
Length = 230
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|7799051|emb|CAB90826.1| ubiquitin [Cyanidium caldarium]
Length = 153
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|248337|gb|AAB21993.1| polyubiquitin [Zea mays]
gi|248339|gb|AAB21994.1| polyubiquitin [Zea mays]
gi|33323474|gb|AAQ07454.1| ubiquitin [Musa acuminata]
gi|52076878|dbj|BAD45891.1| polyubiquitin [Oryza sativa Japonica Group]
gi|218198760|gb|EEC81187.1| hypothetical protein OsI_24193 [Oryza sativa Indica Group]
gi|222636097|gb|EEE66229.1| hypothetical protein OsJ_22384 [Oryza sativa Japonica Group]
gi|413926516|gb|AFW66448.1| ubiquitin2 [Zea mays]
gi|413935667|gb|AFW70218.1| clone MubG1 ubiquitin [Zea mays]
Length = 533
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLADYNIQKESTLHLVLR 528
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 517
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 518 QKESTLHLVLRL 529
>gi|32564339|ref|NP_741158.2| Protein UBQ-1, isoform c [Caenorhabditis elegans]
gi|373219553|emb|CCD68780.1| Protein UBQ-1, isoform c [Caenorhabditis elegans]
Length = 538
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + + LH
Sbjct: 390 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLH 448
Query: 102 LVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 449 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAG 503
>gi|388510652|gb|AFK43392.1| unknown [Medicago truncatula]
Length = 233
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I + K +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNAKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|388507280|gb|AFK41706.1| unknown [Medicago truncatula]
Length = 233
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|270300599|gb|ACZ69386.1| polyubiquitin UBQ14 [Cucumis sativus]
Length = 197
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 51 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 109
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 110 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 167
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 168 KQLEDGRTLADYNIQKESTLHLVLR 192
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
Query: 72 KQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRN 131
+Q+L+F G++L + + DY + + LHLVLRL I V T+ GK VE
Sbjct: 8 QQRLIFAGKQLEDGRT-LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 66
Query: 132 VGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
+ VK +I K E + Q LI G++LED R + D + E+ +HL++R
Sbjct: 67 IDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 116
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 127 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 185
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 186 TLHLVLRL 193
>gi|256079430|ref|XP_002575990.1| ubiquitin (ribosomal protein L40) [Schistosoma mansoni]
Length = 349
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 47 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 105
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 106 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 163
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 164 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 192
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 199 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 257
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 258 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 315
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 316 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 344
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 275 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 333
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 334 QKESTLHLVLRL 345
>gi|225461088|ref|XP_002282119.1| PREDICTED: polyubiquitin-A-like [Vitis vinifera]
Length = 761
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLADYNIQKESTLHLVLR 604
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 669
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 670 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 727
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 728 IFAGKQLEDGRTLADYNIQKESTLHLVLR 756
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 687 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 745
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 746 QKESTLHLVLRL 757
>gi|217074516|gb|ACJ85618.1| unknown [Medicago truncatula]
Length = 229
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|226502871|ref|NP_001148453.1| LOC100282068 [Zea mays]
gi|224059606|ref|XP_002299930.1| predicted protein [Populus trichocarpa]
gi|357474771|ref|XP_003607671.1| Ubiquitin [Medicago truncatula]
gi|902586|gb|AAC49014.1| ubiquitin [Zea mays]
gi|195619382|gb|ACG31521.1| polyubiquitin containing 7 ubiquitin monomers [Zea mays]
gi|222847188|gb|EEE84735.1| predicted protein [Populus trichocarpa]
gi|238013752|gb|ACR37911.1| unknown [Zea mays]
gi|355508726|gb|AES89868.1| Ubiquitin [Medicago truncatula]
gi|413926508|gb|AFW66440.1| putative ubiquitin family protein isoform 1 [Zea mays]
gi|413926509|gb|AFW66441.1| putative ubiquitin family protein isoform 2 [Zea mays]
Length = 381
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|240255754|ref|NP_849299.4| polyubiquitin 10 [Arabidopsis thaliana]
gi|240255758|ref|NP_849301.4| polyubiquitin 10 [Arabidopsis thaliana]
gi|297809731|ref|XP_002872749.1| hexameric polyubiquitin [Arabidopsis lyrata subsp. lyrata]
gi|449454712|ref|XP_004145098.1| PREDICTED: polyubiquitin 10-like [Cucumis sativus]
gi|449471945|ref|XP_004153450.1| PREDICTED: polyubiquitin 10-like [Cucumis sativus]
gi|302595948|sp|P0CG85.1|UBI1P_NICSY RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|302596003|sp|Q8H159.2|UBQ10_ARATH RecName: Full=Polyubiquitin 10; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|170352|gb|AAA34123.1| hexameric polyubiquitin [Nicotiana sylvestris]
gi|870792|gb|AAA68878.1| polyubiquitin [Arabidopsis thaliana]
gi|4115333|gb|AAD03341.1| ubiquitin [Pisum sativum]
gi|4115335|gb|AAD03342.1| ubiquitin [Pisum sativum]
gi|22655101|gb|AAM98141.1| polyubiquitin UBQ10 [Arabidopsis thaliana]
gi|118481031|gb|ABK92469.1| unknown [Populus trichocarpa]
gi|147805226|emb|CAN64480.1| hypothetical protein VITISV_002813 [Vitis vinifera]
gi|241740189|gb|ACS68204.1| ubiquitin 10.1 [Brassica napus]
gi|297318586|gb|EFH49008.1| hexameric polyubiquitin [Arabidopsis lyrata subsp. lyrata]
gi|312282619|dbj|BAJ34175.1| unnamed protein product [Thellungiella halophila]
gi|332657100|gb|AEE82500.1| polyubiquitin 10 [Arabidopsis thaliana]
gi|332657102|gb|AEE82502.1| polyubiquitin 10 [Arabidopsis thaliana]
Length = 457
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|356519611|ref|XP_003528465.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-like [Glycine max]
Length = 776
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 8/149 (5%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE VK ++ K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESXN----VKAKVQDK--EGIPPDQQRL 571
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++L+D R + D + +HL++R
Sbjct: 572 IFAGKQLQDGRTLADYNILKXSTLHLVLR 600
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 73/142 (51%), Gaps = 4/142 (2%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + V SD+I +VK +IQ +Q+L+F G++L + + DY + + + LH
Sbjct: 614 GKTITLEVESSDTIDNVKAKIQDKESIPPDQQRLIFAGKQLEDGLT-LADYNIXE-STLH 671
Query: 102 LVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEEL 161
LVLRL I V T+ GK VE + VK + K E + + LI G++L
Sbjct: 672 LVLRLRGGMQIFVKTLIGKSVTLEVESSDTIDNVKAKFQDK--EGILPDQRRLIFAGKQL 729
Query: 162 EDQRLITDICKRNEAVIHLLVR 183
ED R + D E+ +HL++R
Sbjct: 730 EDGRTLADXNILKESTLHLVLR 751
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 41 GGSVIPMRVMESDSIA------SVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
GG I ++ + +I +VK ++Q G +Q+L+F G++L + + DY +
Sbjct: 531 GGMQIFVKTLTGKTITLEVESXNVKAKVQDKEGIPPDQQRLIFAGKQLQDGRT-LADYNI 589
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 590 LKXSTLHLVLRLCGGMQIFVKTLIGKTITLEVESSDTIDNVKAKIQDK--ESIPPDQQRL 647
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED + D E+ +HL++R
Sbjct: 648 IFAGKQLEDGLTLAD-YNIXESTLHLVLR 675
>gi|340059193|emb|CCC53576.1| putative polyubiquitin [Trypanosoma vivax Y486]
Length = 282
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 88/173 (50%), Gaps = 4/173 (2%)
Query: 12 LEESLNFPGNFTHRPEKLSNDSILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFV 70
L E+ P N + ++LI + ++ G I + V SD+I +VK +IQ G
Sbjct: 16 LRENTATPSNNRQQGRMDQERTMLILVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPP 75
Query: 71 KKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGR 130
+Q+L+F G++L + + DY + + LHLVLRL I V T+ GK VE
Sbjct: 76 DQQRLIFAGKQLEEGRT-LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASD 134
Query: 131 NVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
+ VK +I K E + Q LI G++LE+ R + D + E+ +HL++R
Sbjct: 135 TIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR 185
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 116 IFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LADYNI 174
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 175 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDK--EGIPPDQQRL 232
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R + D + E+ +HL++R
Sbjct: 233 IFAGKQLEEGRTLADYNIQKESTLHLVLR 261
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 192 IFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LADYNI 250
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFE-FH 125
+ LHLVLRL I V +C F FH
Sbjct: 251 QKESTLHLVLRLRGGMQIFVKYLCDPAFHCFH 282
>gi|115444401|ref|NP_001045980.1| Os02g0161900 [Oryza sativa Japonica Group]
gi|115469558|ref|NP_001058378.1| Os06g0681400 [Oryza sativa Japonica Group]
gi|6013289|gb|AAF01315.1|AF184279_1 polyubiquitin [Oryza sativa Indica Group]
gi|6013291|gb|AAF01316.1|AF184280_1 polyubiquitin [Oryza sativa Indica Group]
gi|416038|emb|CAA53665.1| polyubiquitin [Oryza sativa Indica Group]
gi|1574944|gb|AAC49806.1| polyubiquitin [Oryza sativa Indica Group]
gi|49389251|dbj|BAD25213.1| polyubiquitin 6 [Oryza sativa Japonica Group]
gi|113535511|dbj|BAF07894.1| Os02g0161900 [Oryza sativa Japonica Group]
gi|113596418|dbj|BAF20292.1| Os06g0681400 [Oryza sativa Japonica Group]
gi|215715366|dbj|BAG95117.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218190115|gb|EEC72542.1| hypothetical protein OsI_05955 [Oryza sativa Indica Group]
gi|222622224|gb|EEE56356.1| hypothetical protein OsJ_05481 [Oryza sativa Japonica Group]
gi|284431760|gb|ADB84621.1| polyubiquitin [Oryza sativa Japonica Group]
gi|306415955|gb|ADM86852.1| polyubiquitin [Oryza sativa Japonica Group]
gi|326504784|dbj|BAK06683.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|332379898|gb|AEE65380.1| ubiquitin 2 [Panicum virgatum]
gi|413926517|gb|AFW66449.1| ubiquitin2 [Zea mays]
Length = 457
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|225465623|ref|XP_002267206.1| PREDICTED: polyubiquitin-C-like [Vitis vinifera]
Length = 538
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLADYNIQKESTLHLVLR 528
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 517
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 518 QKESTLHLVLRL 529
>gi|226484025|emb|CAX79681.1| ubiquitin C [Schistosoma japonicum]
Length = 229
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGTPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGTPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|124805744|ref|XP_001350526.1| polyubiquitin [Plasmodium falciparum 3D7]
gi|6138833|emb|CAB59728.1| Polyubiquitin [Plasmodium falciparum 3D7]
gi|23496650|gb|AAN36206.1| polyubiquitin [Plasmodium falciparum 3D7]
Length = 381
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|302843878|ref|XP_002953480.1| polyubiquitin [Volvox carteri f. nagariensis]
gi|300261239|gb|EFJ45453.1| polyubiquitin [Volvox carteri f. nagariensis]
Length = 305
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|221059958|ref|XP_002260624.1| ubiquitin [Plasmodium knowlesi strain H]
gi|193810698|emb|CAQ42596.1| ubiquitin, putative [Plasmodium knowlesi strain H]
Length = 609
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 594 QKESTLHLVLRL 605
>gi|357474769|ref|XP_003607670.1| Ubiquitin [Medicago truncatula]
gi|355508725|gb|AES89867.1| Ubiquitin [Medicago truncatula]
Length = 533
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLADYNIQKESTLHLVLR 528
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 517
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 518 QKESTLHLVLRL 529
>gi|225465615|ref|XP_002267017.1| PREDICTED: polyubiquitin-C-like [Vitis vinifera]
Length = 538
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLVDYNIQKESTLHLVLR 528
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 77/149 (51%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ K VE VK +I K E + Q L
Sbjct: 62 QKDSTLHLVLRLRGGMQIFVKTLTRKTITLEVESSDTTDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLAHYNIQKESTLHLVLR 148
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + V DY +
Sbjct: 459 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLV-DYNI 517
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 518 QKESTLHLVLRL 529
>gi|156101796|ref|XP_001616591.1| polyubiquitin 5 [Plasmodium vivax Sal-1]
gi|148805465|gb|EDL46864.1| polyubiquitin 5, putative [Plasmodium vivax]
Length = 381
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|395295|emb|CAA52290.1| polyubiquitin [Volvox carteri f. nagariensis]
Length = 381
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|773586|emb|CAA35579.1| ubiquitin [Tetrahymena pyriformis]
Length = 264
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V ++D+I ++K +IQ G +Q+L+F G++L + V DY + +
Sbjct: 83 TLTGKTITLDVAQTDNIENIKAKIQDKEGIPSDQQRLIFAGKQLEDGRT-VSDYNIQKES 141
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL + V T+ GK V N+ +K +I K E + Q LI G
Sbjct: 142 TLHLVLRLRGGMQVFVKTLTGKTITLEVNSSDNIESIKSKIQDK--EGIPSDQQRLIFAG 199
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R I+D + E+ +HL++R
Sbjct: 200 KQLEDGRNISDYNIQKESTLHLVLR 224
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G + + V +D+I ++K +IQ G +Q+L+F G++L + V DY +
Sbjct: 3 IFVKTLTGKTVTLDVASTDNIENIKQKIQDKEGIPSDQQRLIFAGKQLEEGRT-VSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ +HLVLRL + V T+ GK V + N+ +K +I K E + Q L
Sbjct: 62 QKESTVHLVLRLRGGMQVFVKTLTGKTITLDVAQTDNIENIKAKIQDK--EGIPSDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTVSDYNIQKESTLHLVLR 148
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I S+K +IQ G +Q+L+F G++L + DY + +
Sbjct: 159 TLTGKTITLEVNSSDNIESIKSKIQDKEGIPSDQQRLIFAGKQL-EDGRNISDYNIQKES 217
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK 142
LHLVLRL + V T+ GK V+ N+ VK +I K
Sbjct: 218 TLHLVLRLRGGMQVFVKTLTGKTITLDVDSSDNIENVKAKIQDK 261
>gi|350420431|ref|XP_003492506.1| PREDICTED: polyubiquitin-like [Bombus impatiens]
Length = 471
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 83/159 (52%), Gaps = 14/159 (8%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL---SDL-------QAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGR 144
+ LHLVLRL S L I V T+ GK VE + VK +I K
Sbjct: 366 QKESTLHLVLRLRGGSHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK-- 423
Query: 145 EFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
E + Q LI G++LED R ++D + E+ +HL++R
Sbjct: 424 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 462
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 393 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 451
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 452 QKESTLHLVLRL 463
>gi|342298462|emb|CBY46745.1| polyubiquitin 10 protein [Lepidium appelianum]
Length = 308
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 6 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 64
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 65 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 122
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 123 IFAGKQLEDGRTLADYNIQKESTLHLVLR 151
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 158 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 216
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 217 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 274
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 275 IFAGKQLEDGRTLADYNIQKESTLHLVLR 303
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 234 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 292
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 293 QKESTLHLVLRL 304
>gi|28394784|gb|AAO42469.1| putative polyubiquitin [Arabidopsis lyrata]
Length = 289
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 3/142 (2%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + + LH
Sbjct: 1 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLH 59
Query: 102 LVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEEL 161
LVLRL I V T+ GK VE + VK +I K E + Q LI G++L
Sbjct: 60 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQL 117
Query: 162 EDQRLITDICKRNEAVIHLLVR 183
ED R + D + E+ +HL++R
Sbjct: 118 EDGRTLADYNIQKESTLHLVLR 139
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 77/149 (51%), Gaps = 12/149 (8%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 146 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 204
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE +I K E + Q L
Sbjct: 205 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE--------SSEIQDK--EGIPPDQQRL 254
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 255 IFAGKQLEDGRTLADYNIQKESTLHLVLR 283
>gi|403338482|gb|EJY68482.1| Putative ubiquitin C variant 2 [Oxytricha trifallax]
Length = 228
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|237842873|ref|XP_002370734.1| polyubiquitin, putative [Toxoplasma gondii ME49]
gi|211968398|gb|EEB03594.1| polyubiquitin, putative [Toxoplasma gondii ME49]
gi|221485709|gb|EEE23990.1| polyubiquitin, putative [Toxoplasma gondii GT1]
gi|221502923|gb|EEE28633.1| polyubiquitin, putative [Toxoplasma gondii VEG]
Length = 307
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|39939489|gb|AAR32784.1| polyubiquitin [Clusia minor]
Length = 223
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 31 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 89
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 90 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 147
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 148 IFAGKQLEDGRTLADYNIQKESTLHLVLR 176
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 9/106 (8%)
Query: 78 EGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQ 137
+GR LA DY + + LHLVLRL I V T+ GK VE + VK
Sbjct: 4 DGRTLA-------DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 56
Query: 138 QIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
+I K E + Q LI G++LED R + D + E+ +HL++R
Sbjct: 57 KIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 100
>gi|29836445|gb|AAM78180.1| putative polyubiquitin [Gossypium herbaceum]
gi|29836447|gb|AAM78181.1| putative polyubiquitin [Gossypium raimondii]
gi|29836449|gb|AAM78182.1| putative polyubiquitin [Gossypium barbadense]
gi|29836451|gb|AAM78183.1| putative polyubiquitin [Gossypium barbadense]
gi|29836453|gb|AAM78184.1| putative polyubiquitin [Gossypioides kirkii]
Length = 204
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 54 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 112
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 113 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 170
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 171 IFAGKQLEDGRTLADYNIQKESTLHLVLR 199
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 3/126 (2%)
Query: 58 VKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTV 117
VK +IQ G +Q+L+F G++L + + DY + + LHLVLRL I V T+
Sbjct: 1 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLHLVLRLRGGMQIFVKTL 59
Query: 118 CGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAV 177
GK VE + VK +I K E + Q LI G++LED R + D + E+
Sbjct: 60 TGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 117
Query: 178 IHLLVR 183
+HL++R
Sbjct: 118 LHLVLR 123
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 130 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 188
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 189 QKESTLHLVLRL 200
>gi|397614491|gb|EJK62831.1| hypothetical protein THAOC_16543 [Thalassiosira oceanica]
Length = 240
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 90 IFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 148
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 149 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDK--EGIPPDQQRL 206
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 207 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 235
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 166 IFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 224
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 225 QKESTLHLVLRL 236
>gi|339233042|ref|XP_003381638.1| ubiquitin family protein [Trichinella spiralis]
gi|316979524|gb|EFV62308.1| ubiquitin family protein [Trichinella spiralis]
Length = 274
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 16 TLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 74
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 75 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDK--EGIPPDQQRLIFAG 132
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R+++D + E+ +HL++R
Sbjct: 133 KQLEDGRMLSDYNIQKESTLHLVLR 157
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 76/153 (49%), Gaps = 11/153 (7%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + DY + +
Sbjct: 92 TLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLE-DGRMLSDYNIQKES 150
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICD- 157
LHLVLRL I V T+ GK VE + VK +I K E + Q LI
Sbjct: 151 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDK--EGIPPDQQRLIFAE 208
Query: 158 -------GEELEDQRLITDICKRNEAVIHLLVR 183
G++LED R + D + E+ +HL++R
Sbjct: 209 FMCMAFIGKQLEDGRTLADYNIQKESTLHLVLR 241
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFE--------GRELARSNSRVR 90
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + +
Sbjct: 168 TLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAEFMCMAFIGKQLEDGRT-LA 226
Query: 91 DYGLADGNVLHLVLRLSDLQAITVTTVCGK-VFEFHV 126
DY + + LHLVLRL I V T GK + + HV
Sbjct: 227 DYNIQKESTLHLVLRLRGGMQIFVKTPTGKSLTKIHV 263
>gi|302851086|ref|XP_002957068.1| polyubiquitin [Volvox carteri f. nagariensis]
gi|300257624|gb|EFJ41870.1| polyubiquitin [Volvox carteri f. nagariensis]
Length = 153
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|424513675|emb|CCO66297.1| polyubiquitin [Bathycoccus prasinos]
Length = 359
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 130 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 188
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 189 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 246
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 247 IFAGKQLEDGRTLADYNIQKESTLHLVLR 275
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 206 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 264
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 265 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 322
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 323 IFAGKQLEDGRTLADYNIQKESTLHLVLR 351
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
Query: 72 KQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRN 131
+Q+L+F G++L + + DY + + LHLVLRL I V T+ GK VE
Sbjct: 91 QQRLIFAGKQLEDGRT-LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 149
Query: 132 VGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
+ VK +I K E + Q LI G++LED R + D + E+ +HL++R
Sbjct: 150 IDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 199
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 282 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 340
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 341 QKESTLHLVLRL 352
>gi|384252612|gb|EIE26088.1| hexaubiquitin protein [Coccomyxa subellipsoidea C-169]
Length = 457
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKSKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|157093211|gb|ABV22260.1| polyubiquitin [Karlodinium micrum]
Length = 536
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 13/211 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVSIEATELN 207
I G++LED R ++D + E+ +HL++R ++ K + D E S +
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVK 179
Query: 208 EKGADVVG--EHQFETLFMGYQIRERKLLQN 236
K D G Q +F G Q+ + + L +
Sbjct: 180 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 210
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 13/211 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVSIEATELN 207
I G++LED R ++D + E+ +HL++R ++ K + D E S +
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVK 331
Query: 208 EKGADVVG--EHQFETLFMGYQIRERKLLQN 236
K D G Q +F G Q+ + + L +
Sbjct: 332 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 362
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 13/211 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVSIEATELN 207
I G++LED R ++D + E+ +HL++R ++ K + D E S +
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVK 483
Query: 208 EKGADVVG--EHQFETLFMGYQIRERKLLQN 236
K D G Q +F G Q+ + + L +
Sbjct: 484 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 514
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 500 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 518 QKESTLHLVLRL 529
>gi|344232965|gb|EGV64838.1| ubiquitin [Candida tenuis ATCC 10573]
Length = 229
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|110736490|dbj|BAF00213.1| polyubiquitin 4 UBQ4 [Arabidopsis thaliana]
Length = 351
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 200 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 258
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 259 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 316
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 317 IFAGKQLEDGRTLADYNIQKESTLHLVLR 345
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 82/192 (42%), Gaps = 45/192 (23%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKG----------- 143
+ LHLVLRL I V T+ GK VE + VK +I K+
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQKESTLHLVLRLRGG 197
Query: 144 --------------------------------REFVDLKNQELICDGEELEDQRLITDIC 171
+E + Q LI G++LED R + D
Sbjct: 198 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 257
Query: 172 KRNEAVIHLLVR 183
+ E+ +HL++R
Sbjct: 258 IQKESTLHLVLR 269
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 276 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 334
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 335 QKESTLHLVLRL 346
>gi|357498825|ref|XP_003619701.1| Ubiquitin-like protein [Medicago truncatula]
gi|355494716|gb|AES75919.1| Ubiquitin-like protein [Medicago truncatula]
Length = 290
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 7 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 65
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 66 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 123
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 124 KQLEDGRTLADYNIQKESTLHLVLR 148
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 18/145 (12%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 83 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 141
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VER GY Q Q LI G
Sbjct: 142 TLHLVLRLRGGMQIFVKTLTGKTITLEVER----GYPPDQ-------------QRLIFAG 184
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 185 KQLEDGRTLADYNIQKESTLHLVLR 209
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 8/143 (5%)
Query: 41 GGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVL 100
GG I ++ + +I ++ G+ +Q+L+F G++L + + DY + + L
Sbjct: 151 GGMQIFVKTLTGKTIT-----LEVERGYPPDQQRLIFAGKQLEDGRT-LADYNIQKESTL 204
Query: 101 HLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEE 160
HLVLRL I V T+ GK VE + VK +I K E + Q LI G++
Sbjct: 205 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQ 262
Query: 161 LEDQRLITDICKRNEAVIHLLVR 183
LED R + D + E+ +HL++R
Sbjct: 263 LEDGRTLADYNIQKESTLHLVLR 285
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 220 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 278
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 279 TLHLVLRL 286
>gi|578545|emb|CAA84813.1| ubiquitin [Tetrahymena pyriformis]
Length = 379
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V +D+I +VK +IQ G +Q+L+F G++L + V DY + +
Sbjct: 159 TLTGKTITLDVDSADNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-VSDYNIQKES 217
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL + V T+ GK V+ N+ VK +I K E + Q LI G
Sbjct: 218 TLHLVLRLRGGMQVFVKTLTGKTITLDVDSSDNIENVKAKIQDK--EGIPPDQQRLIFAG 275
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D + E+ +HL++R
Sbjct: 276 KQLEDGRTVSDYNIQKESTLHLVLR 300
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 83/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G + + V +D+I ++K +IQ G +Q+L+F G++L + V DY +
Sbjct: 3 IFVKTLTGKTVTLDVASTDNIENIKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-VSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ +HLVLRL + V T+ GK V + N+ +KQ+I K E + Q L
Sbjct: 62 QKESTVHLVLRLRGGMQVFVKTLTGKTITLDVAQTDNIENIKQKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTVSDYNIQKESTLHLVLR 148
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + V DY + +
Sbjct: 235 TLTGKTITLDVDSSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-VSDYNIQKES 293
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK V N+ VK +I K E + Q LI G
Sbjct: 294 TLHLVLRLRGGMQIFVKTLTGKTITLDVNSTDNIENVKAKIQDK--EGIPPDQQRLIFAG 351
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R I D E+ +HL++R
Sbjct: 352 KQLEDGRSIADYNISKESTLHLVLR 376
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D+I +VK +IQ G +Q+L+F G++L S + DY +
Sbjct: 307 IFVKTLTGKTITLDVNSTDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRS-IADYNI 365
Query: 95 ADGNVLHLVLRL 106
+ + LHLVLRL
Sbjct: 366 SKESTLHLVLRL 377
>gi|357498827|ref|XP_003619702.1| Ubiquitin-like protein [Medicago truncatula]
gi|355494717|gb|AES75920.1| Ubiquitin-like protein [Medicago truncatula]
Length = 245
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 93/184 (50%), Gaps = 14/184 (7%)
Query: 1 MSMACVALSPVLEESLNFPGNFTHRPEKLSNDSILIFL-SVGGSVIPMRVMESDSIASVK 59
++M+C+ L + + HR + + IF+ ++ G I + V SD+I +VK
Sbjct: 29 LTMSCILLRSIQTRT-------QHRSFQFK---MQIFVKTLTGKTITLEVESSDTIDNVK 78
Query: 60 LRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCG 119
+IQ G +Q+L+F G++L + + DY + + LHLVLRL I V T+ G
Sbjct: 79 AKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLHLVLRLRGGMQIFVKTLTG 137
Query: 120 KVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIH 179
K VE + VK +I K E + Q LI G++LED R + D + E+ +H
Sbjct: 138 KTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 195
Query: 180 LLVR 183
L++R
Sbjct: 196 LVLR 199
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 130 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 188
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK 142
+ LHLVLRL I V T+ GK VE + VK +I K
Sbjct: 189 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK 236
>gi|384371341|gb|ABF06579.2| polyubiquitin, partial [Gladiolus grandiflorus]
Length = 162
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCG 119
+ LHLVLRL I V T+ G
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTG 162
>gi|320163196|gb|EFW40095.1| polyubiquitin 5 [Capsaspora owczarzaki ATCC 30864]
Length = 228
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|28189917|dbj|BAC56573.1| similar to polyubiquitin [Bos taurus]
Length = 171
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 12 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 70
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 71 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 128
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 129 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 157
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 88 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 146
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCG 119
+ LHLVLRL I V T+ G
Sbjct: 147 QKESTLHLVLRLRGGMQIFVKTLTG 171
>gi|339899350|ref|XP_003392827.1| putative polyubiquitin [Leishmania infantum JPCM5]
gi|321398786|emb|CBZ09034.1| putative polyubiquitin [Leishmania infantum JPCM5]
Length = 684
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEEGRTLSDYNIQKESTLHLVLR 224
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEEGRTLSDYNIQKESTLHLVLR 376
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 500 IFAGKQLEEGRTLSDYNIQKESTLHLVLR 528
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 594 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDK--EGIPPDQQRL 651
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 652 IFAGKQLEEGRTLSDYNIQKESTLHLVLR 680
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHL+LRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLLLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEEGRTLSDYNIQKESTLHLVLR 148
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 670 QKESTLHLVLRL 681
>gi|357016993|gb|AET50525.1| hypothetical protein [Eimeria tenella]
Length = 153
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|294885539|ref|XP_002771351.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
gi|239874907|gb|EER03167.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
Length = 458
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 13/211 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATE 205
I G++LED R ++D + E+ +HL++R ++ K + D E S IE +
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVK 179
Query: 206 LNEKGADVVGEHQFETLFMGYQIRERKLLQN 236
+ + + Q +F G Q+ + + L +
Sbjct: 180 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 210
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 13/211 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATE 205
I G++LED R ++D + E+ +HL++R ++ K + D E S IE +
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVK 331
Query: 206 LNEKGADVVGEHQFETLFMGYQIRERKLLQN 236
+ + + Q +F G Q+ + + L +
Sbjct: 332 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 362
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ K VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTDKTITLDVEASDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 44 VIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLV 103
I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + + LHLV
Sbjct: 392 TITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLV 450
Query: 104 LRL 106
LRL
Sbjct: 451 LRL 453
>gi|118370600|ref|XP_001018501.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|89300268|gb|EAR98256.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
Length = 228
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 13/211 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATE 205
I G++LED R ++D + E+ +HL++R ++ K + D E S IE +
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVK 179
Query: 206 LNEKGADVVGEHQFETLFMGYQIRERKLLQN 236
+ + + Q +F G Q+ + + L +
Sbjct: 180 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 210
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|297809843|ref|XP_002872805.1| hypothetical protein ARALYDRAFT_490270 [Arabidopsis lyrata subsp.
lyrata]
gi|297318642|gb|EFH49064.1| hypothetical protein ARALYDRAFT_490270 [Arabidopsis lyrata subsp.
lyrata]
Length = 309
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK 142
+ LHLVLRL I V T+ GK VE + VK +I K
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK 261
>gi|294891345|ref|XP_002773533.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
gi|239878705|gb|EER05349.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
Length = 458
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 13/211 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATE 205
I G++LED R ++D + E+ +HL++R ++ K + D E S IE +
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVK 179
Query: 206 LNEKGADVVGEHQFETLFMGYQIRERKLLQN 236
+ + + Q +F G Q+ + + L +
Sbjct: 180 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 210
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 13/211 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATE 205
I G++LED R ++D + E+ +HL++R ++ K + D E S IE +
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVK 331
Query: 206 LNEKGADVVGEHQFETLFMGYQIRERKLLQN 236
+ + + Q +F G Q+ + + L +
Sbjct: 332 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 362
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|159486707|ref|XP_001701379.1| bi-ubiquitin, major isoform [Chlamydomonas reinhardtii]
gi|158271681|gb|EDO97495.1| bi-ubiquitin, major isoform [Chlamydomonas reinhardtii]
Length = 153
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|163575|gb|AAA30720.1| polyubiquitin, partial [Bos taurus]
Length = 164
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 18 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 76
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 77 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAG 134
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D + E+ +HL++R
Sbjct: 135 KQLEDGRTLSDYNIQKESTLHLVLR 159
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 1 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAG 58
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D + E+ +HL++R
Sbjct: 59 KQLEDGRTLSDYNIQKESTLHLVLR 83
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 94 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 152
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 153 TLHLVLRL 160
>gi|357474763|ref|XP_003607667.1| Multidrug resistance protein ABC transporter family [Medicago
truncatula]
gi|355508722|gb|AES89864.1| Multidrug resistance protein ABC transporter family [Medicago
truncatula]
Length = 752
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 226 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 284
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 285 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 342
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 343 KQLEDGRTLADYNIQKESTLHLVLR 367
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 378 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 436
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 437 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 494
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 495 KQLEDGRTLADYNIQKESTLHLVLR 519
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 530 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 588
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 589 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 646
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 647 KQLEDGRTLADYNIQKESTLHLVLR 671
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 606 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 664
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 665 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 722
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 723 KQLEDGRTLADYNIQKESTLHLVLR 747
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 682 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 740
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 741 TLHLVLRL 748
>gi|294887015|ref|XP_002771956.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
gi|239875778|gb|EER03772.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
Length = 230
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 13/211 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATE 205
I G++LED R ++D + E+ +HL++R ++ K + D E S IE +
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVK 179
Query: 206 LNEKGADVVGEHQFETLFMGYQIRERKLLQN 236
+ + + Q +F G Q+ + + L +
Sbjct: 180 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 210
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|56199554|gb|AAV84266.1| ubiquitin [Culicoides sonorensis]
Length = 191
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 41 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 99
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 100 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 157
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 158 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 186
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
Query: 72 KQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRN 131
+Q+L+F G++L + + DY + + LHLVLRL I V T+ GK VE
Sbjct: 2 QQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 60
Query: 132 VGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
+ VK +I K E + Q LI G++LED R ++D + E+ +HL++R
Sbjct: 61 IENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 110
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 117 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 175
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 176 QKESTLHLVLRL 187
>gi|413926506|gb|AFW66438.1| putative ubiquitin family protein, partial [Zea mays]
gi|413926515|gb|AFW66447.1| ubiquitin2, partial [Zea mays]
Length = 349
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 200 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 258
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 259 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 316
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 317 IFAGKQLEDGRTLADYNIQKESTLHLVLR 345
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 82/192 (42%), Gaps = 45/192 (23%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKG----------- 143
+ LHLVLRL I V T+ GK VE + VK +I K+
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQKESTLHLVLRLRGG 197
Query: 144 --------------------------------REFVDLKNQELICDGEELEDQRLITDIC 171
+E + Q LI G++LED R + D
Sbjct: 198 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 257
Query: 172 KRNEAVIHLLVR 183
+ E+ +HL++R
Sbjct: 258 IQKESTLHLVLR 269
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 276 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 334
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 335 QKESTLHLVLRL 346
>gi|324520160|gb|ADY47572.1| Polyubiquitin-A, partial [Ascaris suum]
Length = 354
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIA-KKGR 144
+ LHLVLRL I V T+ GK VE + VK +I K+GR
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGR 264
>gi|7267292|emb|CAB81074.1| polyubiquitin (ubq10) [Arabidopsis thaliana]
Length = 464
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK 142
+ LHLVLRL I V T+ GK VE + VK +I K
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK 413
>gi|118370594|ref|XP_001018498.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|89300265|gb|EAR98253.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
Length = 304
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 13/211 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATE 205
I G++LED R ++D + E+ +HL++R ++ K + D E S IE +
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVK 179
Query: 206 LNEKGADVVGEHQFETLFMGYQIRERKLLQN 236
+ + + Q +F G Q+ + + L +
Sbjct: 180 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 210
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDSIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLDVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|254802948|gb|ACT82769.1| polyubiquitin [Nicotiana tabacum]
Length = 188
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 29 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 87
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 88 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 145
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 146 KQLEDGRTLADYNIQKESTLHLVLR 170
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 91 DYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLK 150
DY + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 4 DYNIQKESTLHLVLRLRGGLQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPD 61
Query: 151 NQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R + D + E+ +HL++R
Sbjct: 62 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 94
>gi|118370590|ref|XP_001018496.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|118370606|ref|XP_001018504.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|89300263|gb|EAR98251.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
gi|89300271|gb|EAR98259.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
Length = 304
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 13/211 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATE 205
I G++LED R ++D + E+ +HL++R ++ K + D E S IE +
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVK 179
Query: 206 LNEKGADVVGEHQFETLFMGYQIRERKLLQN 236
+ + + Q +F G Q+ + + L +
Sbjct: 180 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 210
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|3603456|gb|AAC35858.1| polyubiquitin [Capsicum chinense]
Length = 265
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 115 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 173
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 174 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 231
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 232 IFAGKQLEDGRTLADYNIQKESTLHLVLR 260
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 39 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 97
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 98 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 155
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 156 IFAGKQLEDGRTLADYNIQKESTLHLVLR 184
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Query: 73 QKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNV 132
Q+L+F G++L + + DY + + LHLVLRL I V T+ GK VE +
Sbjct: 1 QRLIFAGKQLEDGRT-LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 59
Query: 133 GYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
VK +I K E + Q LI G++LED R + D + E+ +HL++R
Sbjct: 60 DNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 108
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 191 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 249
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 250 QKESTLHLVLRL 261
>gi|157877206|ref|XP_001686933.1| putative polyubiquitin [Leishmania major strain Friedlin]
gi|68130008|emb|CAJ09316.1| putative polyubiquitin [Leishmania major strain Friedlin]
Length = 837
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEEGRTLSDYNIQKESTLHLVLR 148
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEEGRTLSDYNIQKESTLHLVLR 300
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 594 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDK--EGIPPDQQRL 651
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 652 IFAGKQLEEGRTLSDYNIQKESTLHLVLR 680
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 687 IFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 745
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 746 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDK--EGIPPDQQRL 803
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 804 IFAGKQLEEGRTLSDYNIQKESTLHLVLR 832
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTIVLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 500 IFAGKQLEEGRTLSDYNIQKESTLHLVLR 528
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTIVLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEEGRTLSDYNIQKESTLHLVLR 452
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 763 IFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 821
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 822 QKESTLHLVLRL 833
>gi|170584490|ref|XP_001897032.1| polyubiquitin precursor [Brugia malayi]
gi|158595567|gb|EDP34110.1| polyubiquitin precursor, putative [Brugia malayi]
Length = 391
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 93 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 151
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 152 TLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAG 209
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D + E+ +HL++R
Sbjct: 210 KQLEDGRTLSDYNIQKESTLHLVLR 234
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 245 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 303
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 304 TLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAG 361
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D + E+ +HL++R
Sbjct: 362 KQLEDGRTLSDYNIQKESTLHLVLR 386
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 321 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 379
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 380 TLHLVLRL 387
>gi|90076064|dbj|BAE87712.1| unnamed protein product [Macaca fascicularis]
Length = 210
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEAEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAIT-VTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQE 153
+ LHLVLRL A++ V T+ GK VE + VK +I K E + Q
Sbjct: 138 QKESTLHLVLRLRGGDAVSYVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQR 195
Query: 154 LICDGEE 160
LI G++
Sbjct: 196 LIFAGKQ 202
>gi|71835909|gb|AAZ42330.1| ubiquitin protein 1 [Caenorhabditis remanei]
Length = 164
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 13 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 71
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 72 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 129
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 130 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 158
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 100 LHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGE 159
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G+
Sbjct: 1 LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGK 58
Query: 160 ELEDQRLITDICKRNEAVIHLLVR 183
+LED R ++D + E+ +HL++R
Sbjct: 59 QLEDGRTLSDYNIQKESTLHLVLR 82
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 89 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 147
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 148 QKESTLHLVLRL 159
>gi|399525602|gb|AFP44113.1| ubiquitin, partial [Lycoris longituba]
Length = 187
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 6 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 64
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 65 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 122
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 123 IFAGKQLEDGRTLADYNIQKESTLHLVLR 151
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 82 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 140
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQI 139
+ LHLVLRL I V T+ GK VE + VK +I
Sbjct: 141 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIDNVKAKI 185
>gi|301617753|ref|XP_002938291.1| PREDICTED: ubiquitin-like [Xenopus (Silurana) tropicalis]
Length = 153
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L S + DY + +
Sbjct: 7 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDCRS-LADYNIQKES 65
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDK--EGIPPDQQRLIFAG 123
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 124 KQLEDGRTLCDYNIQKESTLHLVLR 148
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 83 TLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LCDYNIQKES 141
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 142 TLHLVLRL 149
>gi|384495224|gb|EIE85715.1| polyubiquitin [Rhizopus delemar RA 99-880]
Length = 230
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|149391401|gb|ABR25718.1| polyubiquitin containing 7 ubiquitin monomers [Oryza sativa Indica
Group]
Length = 178
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 28 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 86
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 87 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 144
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 145 IFAGKQLEDGRTLADYNIQKESTLHLVLR 173
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 9/106 (8%)
Query: 78 EGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQ 137
+GR LA DY + + LHLVLRL I V T+ GK VE + VK
Sbjct: 1 DGRTLA-------DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 53
Query: 138 QIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
+I K E + Q LI G++LED R + D + E+ +HL++R
Sbjct: 54 KIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 97
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 104 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 162
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 163 QKESTLHLVLRL 174
>gi|28436481|gb|AAO43307.1| putative polyubiquitin [Arabidopsis thaliana]
Length = 250
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 23 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 81
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 82 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 139
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 140 IFAGKQLEDGRTLADYNIQKESTLHLVLR 168
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 99 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 157
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 158 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 215
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 216 IFAGKQLEDGRTLADYNIQKESTLHLVLR 244
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 91 DYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLK 150
DY + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 2 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPD 59
Query: 151 NQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R + D + E+ +HL++R
Sbjct: 60 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 92
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 175 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 233
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 234 QKESTLHLVLRL 245
>gi|118358270|ref|XP_001012381.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|118364888|ref|XP_001015665.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|1778712|gb|AAC47430.1| polyubiquitin [Tetrahymena thermophila]
gi|89294148|gb|EAR92136.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
gi|89297432|gb|EAR95420.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
Length = 381
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 13/211 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATE 205
I G++LED R ++D + E+ +HL++R ++ K + D E S IE +
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVK 179
Query: 206 LNEKGADVVGEHQFETLFMGYQIRERKLLQN 236
+ + + Q +F G Q+ + + L +
Sbjct: 180 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 210
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 13/211 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATE 205
I G++LED R ++D + E+ +HL++R ++ K + D E S IE +
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVK 331
Query: 206 LNEKGADVVGEHQFETLFMGYQIRERKLLQN 236
+ + + Q +F G Q+ + + L +
Sbjct: 332 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 362
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|302393778|sp|P42739.2|UBIQP_ACECL RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Contains: RecName: Full=Ubiquitin-related 1; Contains:
RecName: Full=Ubiquitin-related 2; Flags: Precursor
gi|433970|emb|CAA82268.1| polyubiquitin [Acetabularia peniculus]
Length = 423
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD++ +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 196 IFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 254
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE V VK +I K E + Q L
Sbjct: 255 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTVENVKSKIQDK--EGIPPDQQRL 312
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 313 IFAGKQLEDGRTLADYNIQKESTLHLVLR 341
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD++ +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 44 IFVKTLTGKTITLEVQSSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGLT-LADYNI 102
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE V VK +I K E + Q L
Sbjct: 103 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTVENVKSKIQDK--EGIPPDQQRL 160
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 161 IFAGKQLEDGRTLADYNIQKESTLHLVLR 189
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD++ +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 272 IFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 330
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE V VK +I K E + Q +
Sbjct: 331 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTVENVKSKIQDK--EGIPPDQQRI 388
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 389 IFAGKQLEDGRTLADYNIQKESTLHLVLR 417
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 72 KQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRN 131
+Q+L+F G++L + + DY + + LHLVLRL I V T+ GK V+
Sbjct: 5 QQRLIFAGKQLEDGRT-LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVQSSDT 63
Query: 132 VGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
V VK +I K E + Q LI G++LED + D + E+ +HL++R
Sbjct: 64 VENVKSKIQDK--EGIPPDQQRLIFAGKQLEDGLTLADYNIQKESTLHLVLR 113
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD++ +VK +IQ G +Q+++F G++L + + DY +
Sbjct: 348 IFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRIIFAGKQLEDGRT-LADYNI 406
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 407 QKESTLHLVLRL 418
>gi|384246185|gb|EIE19676.1| polyubiquitin [Coccomyxa subellipsoidea C-169]
Length = 305
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|1326022|emb|CAA25706.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 191
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 41 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 99
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 100 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 157
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G +LED R ++D + E+ +HL++R
Sbjct: 158 IFAGNQLEDGRTLSDYNIQKESTLHLVLR 186
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
Query: 72 KQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRN 131
+Q+L+F G++L + + DY + + LHLVLRL I V T+ GK VE
Sbjct: 2 QQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 60
Query: 132 VGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
+ VK +I K E + Q LI G++LED R ++D + E+ +HL++R
Sbjct: 61 IDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 110
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G +L + + DY +
Sbjct: 117 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGNQLEDGRT-LSDYNI 175
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 176 QKESTLHLVLRL 187
>gi|357513727|ref|XP_003627152.1| Ubiquitin [Medicago truncatula]
gi|355521174|gb|AET01628.1| Ubiquitin [Medicago truncatula]
Length = 270
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 7 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 65
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 66 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 123
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 124 KQLEDGRTLADYNIQKESTLHLVLR 148
>gi|19698785|gb|AAL91103.1| ubiquitin [Acanthocheilonema viteae]
Length = 258
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 32 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 90
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 91 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 148
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 149 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 177
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 108 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 166
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 167 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 224
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 225 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 253
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 91 DYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLK 150
DY + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 11 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPD 68
Query: 151 NQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R ++D + E+ +HL++R
Sbjct: 69 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 101
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 184 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 242
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 243 QKESTLHLVLRL 254
>gi|330790588|ref|XP_003283378.1| ubiquitin [Dictyostelium purpureum]
gi|325086643|gb|EGC40029.1| ubiquitin [Dictyostelium purpureum]
gi|328867190|gb|EGG15573.1| ubiquitin [Dictyostelium fasciculatum]
Length = 381
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|28436476|gb|AAO43305.1| putative polyubiquitin [Arabidopsis thaliana]
Length = 325
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 174 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 232
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 233 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQDK--EGIPPDQQRL 290
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 291 IFAGKQLEDGRTLADYNIQKESTLHLVLR 319
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 23 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 81
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 82 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 139
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D ++ E+ +HL++R
Sbjct: 140 IFAGKQLEDGRTLADNIQK-ESTLHLVLR 167
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 91 DYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLK 150
DY + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 2 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPD 59
Query: 151 NQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R + D + E+ +HL++R
Sbjct: 60 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 92
Score = 44.3 bits (103), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V S +I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 250 IFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 308
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 309 QKESTLHLVLRL 320
>gi|302595967|sp|P0CG82.1|UBIQP_TETPY RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|578547|emb|CAA43387.1| ubiquitin [Tetrahymena pyriformis]
Length = 381
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 13/211 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATE 205
I G++LED R ++D + E+ +HL++R ++ K + D E S IE +
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVK 179
Query: 206 LNEKGADVVGEHQFETLFMGYQIRERKLLQN 236
+ + + Q +F G Q+ + + L +
Sbjct: 180 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 210
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 13/211 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATE 205
I G++LED R ++D + E+ +HL++R ++ K + D E S IE +
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVK 331
Query: 206 LNEKGADVVGEHQFETLFMGYQIRERKLLQN 236
+ + + Q +F G Q+ + + L +
Sbjct: 332 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 362
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|218198762|gb|EEC81189.1| hypothetical protein OsI_24195 [Oryza sativa Indica Group]
Length = 223
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 73 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 131
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 132 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 189
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 190 IFAGKQLEDGRTLADYNIQKESTLHLVLR 218
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
Query: 49 VMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSD 108
V SD+I +VK +IQ G +Q+L+F G++L + + DY + + LHLVLRL
Sbjct: 11 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLHLVLRLRG 69
Query: 109 LQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLIT 168
I V T+ GK VE + VK +I K E + Q LI G++LED R +
Sbjct: 70 GMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLA 127
Query: 169 DICKRNEAVIHLLVR 183
D + E+ +HL++R
Sbjct: 128 DYNIQKESTLHLVLR 142
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 149 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 207
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 208 QKESTLHLVLRL 219
>gi|5523979|gb|AAD44042.1|AF104025_1 polyprotein [Bovine viral diarrhea virus 2]
Length = 432
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 226 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 284
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 285 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 342
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 343 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 371
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 302 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 360
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 361 QKESTLHLVLRL 372
>gi|402471724|gb|EJW05300.1| polyubiquitin [Edhazardia aedis USNM 41457]
Length = 153
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|328864943|gb|EGG13329.1| hypothetical protein DFA_11090 [Dictyostelium fasciculatum]
Length = 356
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 3/128 (2%)
Query: 56 ASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVT 115
+++ +++ G +Q+L+F G++L + + DY + + LHLVLRL I V
Sbjct: 227 GGMQIFVKTLTGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQIFVK 285
Query: 116 TVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNE 175
T+ GK VE + VK +I K E + Q LI G++LED R ++D + E
Sbjct: 286 TLTGKTITLEVEGSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 343
Query: 176 AVIHLLVR 183
+ +HL++R
Sbjct: 344 STLHLVLR 351
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 282 IFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 340
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 341 QKESTLHLVLRL 352
>gi|290979900|ref|XP_002672671.1| polyubiquitin [Naegleria gruberi]
gi|284086249|gb|EFC39927.1| polyubiquitin [Naegleria gruberi]
Length = 293
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 143 IFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 201
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 202 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDK--EGIPPDQQRL 259
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 260 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 288
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 80/156 (51%), Gaps = 3/156 (1%)
Query: 28 KLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
++ DS + I + V +D+I +VK +IQ G +Q+L+F G++L +
Sbjct: 60 EMKQDSTIYLALSWRDTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 119
Query: 88 RVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFV 147
+ DY + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 120 -LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDK--EGI 176
Query: 148 DLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R ++D + E+ +HL++R
Sbjct: 177 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 212
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 15/149 (10%)
Query: 35 LIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
L ++ G P+ V +DSI +K + G Q+L+ G++L + ++DY +
Sbjct: 3 LFIKTLSGHSFPIDVECTDSIEKIKELVNEKQGIPPPSQRLILNGKKLEDGKT-IQDYEM 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ ++L L D T+T VE + VK +I K E + Q L
Sbjct: 62 KQDSTIYLALSWRD----TIT--------LEVESNDTIENVKSKIQDK--EGIPPDQQRL 107
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 108 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 136
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 219 IFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 277
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 278 QKESTLHLVLRL 289
>gi|281208308|gb|EFA82486.1| ubiquitin [Polysphondylium pallidum PN500]
Length = 443
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 217 IFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 275
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 276 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDK--EGIPPDQQRL 333
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 334 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 362
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 293 IFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 351
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 352 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDK--EGIPPDQQRL 409
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 410 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 438
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 75/149 (50%), Gaps = 18/149 (12%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK + +E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLIQD----------------KEGIPPDQQRL 105
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 106 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 134
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 7/143 (4%)
Query: 41 GGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVL 100
GG I ++ + +I IQ G +Q+L+F G++L + + DY + + L
Sbjct: 75 GGMQIFVKTLTGKTITL----IQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTL 129
Query: 101 HLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEE 160
HLVLRL I V T+ GK VE + VK +I K E + Q LI G++
Sbjct: 130 HLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQ 187
Query: 161 LEDQRLITDICKRNEAVIHLLVR 183
LED R ++D + E+ +HL++R
Sbjct: 188 LEDGRTLSDYNIQKESTLHLVLR 210
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 369 IFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 427
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 428 QKESTLHLVLRL 439
>gi|323303927|gb|EGA57707.1| Ubi4p [Saccharomyces cerevisiae FostersB]
Length = 248
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G+ L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKXLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVE 127
+ LHLVLRL I V T+ GK VE
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 246
>gi|297841025|ref|XP_002888394.1| hexaubiquitin protein [Arabidopsis lyrata subsp. lyrata]
gi|297334235|gb|EFH64653.1| hexaubiquitin protein [Arabidopsis lyrata subsp. lyrata]
Length = 483
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLVLR 452
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 441
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 442 QKESTLHLVLRL 453
>gi|399217583|emb|CCF74470.1| unnamed protein product [Babesia microti strain RI]
Length = 282
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|302143596|emb|CBI22349.3| unnamed protein product [Vitis vinifera]
Length = 298
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 34 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 92
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 93 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 150
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 151 KQLEDGRTLADYNIQKESTLHLVLR 175
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 186 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 244
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK 142
LHLVLRL I V T+ GK VE + VK +I K
Sbjct: 245 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK 288
>gi|123718340|emb|CAL30085.1| polyubiquitin [Globodera pallida]
Length = 154
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|378747684|gb|AFC36452.1| ubiquitin, partial [Anoectochilus roxburghii]
Length = 214
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 34 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 92
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 93 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 150
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 151 IFAGKQLEDGRTLADYNIQKESTLHLVLR 179
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 110 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 168
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQI 139
+ LHLVLRL I V T+ GK VE + VK +I
Sbjct: 169 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 213
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 9/106 (8%)
Query: 78 EGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQ 137
+GR LA DY + + LHLVLRL I V T+ GK VE + VK
Sbjct: 7 DGRTLA-------DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 59
Query: 138 QIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
+I K E + Q LI G++LED R + D + E+ +HL++R
Sbjct: 60 KIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 103
>gi|330805713|ref|XP_003290823.1| hypothetical protein DICPUDRAFT_92560 [Dictyostelium purpureum]
gi|325079033|gb|EGC32654.1| hypothetical protein DICPUDRAFT_92560 [Dictyostelium purpureum]
Length = 229
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|443900281|dbj|GAC77607.1| ubiquitin and ubiquitin-like proteins [Pseudozyma antarctica T-34]
Length = 228
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|350537541|ref|NP_001232763.1| putative ubiquitin C variant 9 [Taeniopygia guttata]
gi|197129065|gb|ACH45563.1| putative ubiquitin C variant 9 [Taeniopygia guttata]
Length = 229
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTIILEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTIILEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|339232974|ref|XP_003381604.1| ubiquitin family protein [Trichinella spiralis]
gi|316979565|gb|EFV62342.1| ubiquitin family protein [Trichinella spiralis]
Length = 210
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 7 TLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 65
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDK--EGIPPDQQRLIFAG 123
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D + E+ +HL++R
Sbjct: 124 KQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 83 TLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 141
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 142 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDK--EGIPPDQQRLIFAG 199
Query: 159 EEL 161
EL
Sbjct: 200 IEL 202
>gi|1684855|gb|AAB36545.1| ubiquitin-like protein [Phaseolus vulgaris]
Length = 407
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 105 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 163
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 164 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 221
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 222 IFAGKQLEDGRTLADYNIQKESTLHLVLR 250
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 181 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 239
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 240 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 297
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 298 IFAGKQLEDGRTLADYNIQKESTLHLVLR 326
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 257 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 315
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 316 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 373
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 374 IFAGKQLEDGRTLADYNIQKESTLHLVLR 402
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 9/106 (8%)
Query: 78 EGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQ 137
+GR LA DY + + LHLVLRL I V T+ GK VE + VK
Sbjct: 78 DGRTLA-------DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 130
Query: 138 QIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
+I K E + Q LI G++LED R + D + E+ +HL++R
Sbjct: 131 KIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 174
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 333 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 391
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 392 QKESTLHLVLRL 403
>gi|290997019|ref|XP_002681079.1| polyubiquitin [Naegleria gruberi]
gi|284094702|gb|EFC48335.1| polyubiquitin [Naegleria gruberi]
Length = 153
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 81/149 (54%), Gaps = 3/149 (2%)
Query: 35 LIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
L ++ G I + V +DSI +VK +IQ G ++Q+L++ G++L + + DY +
Sbjct: 3 LFVKTLTGKTITLEVESNDSIENVKSKIQDKEGIPPEQQRLIYAGKQLEDGRT-INDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL + V T+ GK +E V +KQ+I K E + Q L
Sbjct: 62 QKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDK--EGIPSDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R I+D + ++ +HL++R
Sbjct: 120 IYAGKQLEDGRTISDYNLQKDSTVHLVLR 148
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 35 LIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
L ++ G I + + +D++ ++K +I G +Q+L++ G++L + + DY L
Sbjct: 79 LFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQRLIYAGKQLEDGRT-ISDYNL 137
Query: 95 ADGNVLHLVLRL 106
+ +HLVLRL
Sbjct: 138 QKDSTVHLVLRL 149
>gi|118370596|ref|XP_001018499.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|89300266|gb|EAR98254.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
Length = 228
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 104/211 (49%), Gaps = 13/211 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + + SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDIEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTVTLDVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATE 205
I G++LED R ++D + E+ +HL++R ++ K + D E S IE +
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDIEASDTIENVK 179
Query: 206 LNEKGADVVGEHQFETLFMGYQIRERKLLQN 236
+ + + Q +F G Q+ + + L +
Sbjct: 180 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 210
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G + + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTVTLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK +E + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDIEASDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + + SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLDIEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|27734398|gb|AAM51223.1| polyubiquitin [Bigelowiella natans]
gi|27734402|gb|AAM51224.1| polyubiquitin [Bigelowiella natans]
Length = 306
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 5/162 (3%)
Query: 24 HRPEKLSNDSILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGREL 82
H +L S+ IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L
Sbjct: 147 HLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQL 206
Query: 83 ARSNSRVRDYGLADGNVLHLVLRL-SDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAK 141
+ + DY + + LHLVLRL I V T+ GK V+ + VKQ+I
Sbjct: 207 EDGRT-LADYNIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQKIQD 265
Query: 142 KGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
K E + Q LI G++LED R + D + E+ +HL++R
Sbjct: 266 K--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 305
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 83/153 (54%), Gaps = 5/153 (3%)
Query: 33 SILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRD 91
S+ IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + D
Sbjct: 2 SMQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LAD 60
Query: 92 YGLADGNVLHLVLRL-SDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLK 150
Y + + LHLVLRL I V T+ GK V+ + VKQ+I K E +
Sbjct: 61 YNIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQKIQDK--EGIPPD 118
Query: 151 NQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R + D + E+ +HL++R
Sbjct: 119 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 151
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 24 HRPEKLSNDSILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGREL 82
H +L S+ IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L
Sbjct: 224 HLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQL 283
Query: 83 ARSNSRVRDYGLADGNVLHLVLRL 106
+ + DY + + LHLVLRL
Sbjct: 284 EDGRT-LADYNIQKESTLHLVLRL 306
>gi|145498050|ref|XP_001435013.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402142|emb|CAK67616.1| unnamed protein product [Paramecium tetraurelia]
Length = 153
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKNITLDVEPSDTIDAVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKNITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|302595966|sp|P0CG83.1|UBIQP_HORVU RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|755763|emb|CAA27751.1| unnamed protein product [Hordeum vulgare subsp. vulgare]
Length = 171
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 21 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 79
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 80 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 137
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 138 IFAGKQLEDGRTLADYNIQKESTLHLVLR 166
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 92 YGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKN 151
Y + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 1 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQ 58
Query: 152 QELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R + D + E+ +HL++R
Sbjct: 59 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 90
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 97 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 155
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 156 QKESTLHLVLRL 167
>gi|82622379|gb|ABB86777.1| unknown [Theileria lestoquardi]
Length = 159
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 85/156 (54%), Gaps = 5/156 (3%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I + E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI--QDEEGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR-KSAKVR 189
I G++LED R ++D + E+ +HL++R + KV+
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGKVK 155
>gi|82512|pir||PS0380 ubiquitin precursor - rice (fragment)
gi|218189|dbj|BAA02241.1| poly-ubiquitin [Oryza sativa Japonica Group]
Length = 189
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 43 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 101
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 102 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 159
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 160 KQLEDGRTLADYNIQKESTLHLVLR 184
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Query: 73 QKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNV 132
Q+L+F G++L + + DY + + LHLVLRL I V T+ GK VE +
Sbjct: 1 QRLIFAGKQLEDGRT-LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 59
Query: 133 GYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
VK +I K E + Q LI G++LED R + D + E+ +HL++R
Sbjct: 60 DNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 108
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 119 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 177
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 178 TLHLVLRL 185
>gi|388857763|emb|CCF48657.1| probable polyubiquitin [Ustilago hordei]
Length = 228
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|386278574|gb|AFJ04519.1| ubiquitin, partial [Vernicia fordii]
Length = 176
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 26 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 84
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 85 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 142
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 143 IFAGKQLEDGRTLADYNIQKESTLHLVLR 171
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 91 DYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLK 150
DY + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 5 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPD 62
Query: 151 NQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R + D + E+ +HL++R
Sbjct: 63 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 95
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 102 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 160
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 161 QKESTLHLVLRL 172
>gi|339896986|ref|XP_001463552.2| polyubiquitin [Leishmania infantum JPCM5]
gi|321399001|emb|CAM65917.2| polyubiquitin [Leishmania infantum JPCM5]
Length = 866
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 57 IFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 115
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 116 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDK--EGIPPDQQRL 173
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 174 IFAGKQLEEGRTLSDYNIQKESTLHLVLR 202
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 133 IFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 191
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 192 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDK--EGIPPDQQRL 249
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 250 IFAGKQLEEGRTLSDYNIQKESTLHLVLR 278
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 285 IFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 343
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 344 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDK--EGIPPDQQRL 401
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 402 IFAGKQLEEGRTLSDYNIQKESTLHLVLR 430
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 437 IFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 495
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 496 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDK--EGIPPDQQRL 553
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 554 IFAGKQLEEGRTLSDYNIQKESTLHLVLR 582
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 589 IFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 647
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 648 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDK--EGIPPDQQRL 705
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 706 IFAGKQLEEGRTLSDYNIQKESTLHLVLR 734
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 665 IFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 723
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 724 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDK--EGIPPDQQRL 781
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 782 IFAGKQLEEGRTLSDYNIQKESTLHLVLR 810
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Query: 67 GFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHV 126
G +Q+L+F G++L + + DY + + LHLVLRL I V T+ GK V
Sbjct: 13 GIPPDQQRLIFAGKQLEEGRT-LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEV 71
Query: 127 ERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
E + VK +I K E + Q LI G++LE+ R ++D + E+ +HL++R
Sbjct: 72 EPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 126
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 741 IFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 799
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 800 QKESTLHLVLRL 811
>gi|330797961|ref|XP_003287025.1| ubiquitin [Dictyostelium purpureum]
gi|325082988|gb|EGC36453.1| ubiquitin [Dictyostelium purpureum]
Length = 365
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 20/149 (13%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKE----------- 262
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
ED R ++D + E+ +HL++R
Sbjct: 263 -------EDGRTLSDYNIQKESTLHLVLR 284
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 20/149 (13%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ +GR L+ DY +
Sbjct: 231 IFVKTLTGKTITLEVEGSDTIENVKTKIQDKE----------EDGRTLS-------DYNI 273
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 274 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDK--EGIPPDQQRL 331
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 332 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 360
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 291 IFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 349
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 350 QKESTLHLVLRL 361
>gi|154346116|ref|XP_001568995.1| putative polyubiquitin [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134066337|emb|CAM44128.1| putative polyubiquitin [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 992
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 839 IFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 897
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 898 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDK--EGIPPDQQRL 955
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 956 IFAGKQLEEGRTLSDYNIQKESTLHLVLR 984
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEEGRTLSDYNIQKESTLHLVLR 300
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 500 IFAGKQLEEGRTLSDYNIQKESTLHLVLR 528
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 670 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDK--EGIPPDQQRL 727
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 728 IFAGKQLEEGRTLSDYNIQKESTLHLVLR 756
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 763 IFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 821
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 822 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDK--EGIPPDQQRL 879
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 880 IFAGKQLEEGRTLSDYNIQKESTLHLVLR 908
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEEGRTLSDYNIQKESTLHLVLR 148
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 593
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 594 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDK--EGIPPDQQRL 651
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 652 IFAGKQLEEGRTLSDYNIQKESTLHLVLR 680
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 424 IFAGKQLEEGRTLSDYNIQKESTLHLVLR 452
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 915 IFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 973
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 974 QKESTLHLVLRL 985
>gi|154339611|ref|XP_001562497.1| polyubiquitin, putative [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134063080|emb|CAM39530.1| polyubiquitin, putative [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 1068
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 348 IFAGKQLEEGRTLSDYNIQKESTLHLVLR 376
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEEGRTLSDYNIQKESTLHLVLR 224
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 576 IFAGKQLEEGRTLSDYNIQKESTLHLVLR 604
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 763 IFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 821
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 822 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDK--EGIPPDQQRL 879
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 880 IFAGKQLEEGRTLSDYNIQKESTLHLVLR 908
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEEGRTLSDYNIQKESTLHLVLR 148
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 383 IFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 441
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDK--EGIPPDQQRL 499
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 500 IFAGKQLEEGRTLSDYNIQKESTLHLVLR 528
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 669
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 670 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDK--EGIPPDQQRL 727
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 728 IFAGKQLEEGRTLSDYNIQKESTLHLVLR 756
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 915 IFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 973
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 974 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDK--EGIPPDQQRL 1031
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + E+ +HL++R
Sbjct: 1032 IFAGKQLEEGRTLSDYNIQKESTLHLVLR 1060
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 991 IFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LSDYNI 1049
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 1050 QKESTLHLVLRL 1061
>gi|428164090|gb|EKX33130.1| ubiquitin [Guillardia theta CCMP2712]
Length = 153
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDMVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|428175943|gb|EKX44830.1| ubiquitin [Guillardia theta CCMP2712]
Length = 229
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDMVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDMVKSKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|27734407|gb|AAM51225.1| polyubiquitin [Bigelowiella natans]
Length = 320
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 5/162 (3%)
Query: 24 HRPEKLSNDSILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGREL 82
H +L S+ IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L
Sbjct: 147 HLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQL 206
Query: 83 ARSNSRVRDYGLADGNVLHLVLRL-SDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAK 141
+ + DY + + LHLVLRL I V T+ GK V+ + VKQ+I
Sbjct: 207 EDGRT-LADYNIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQKIQD 265
Query: 142 KGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
K E + Q LI G++LED R + D + E+ +HL++R
Sbjct: 266 K--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 305
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 83/153 (54%), Gaps = 5/153 (3%)
Query: 33 SILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRD 91
S+ IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + D
Sbjct: 2 SMQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LAD 60
Query: 92 YGLADGNVLHLVLRL-SDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLK 150
Y + + LHLVLRL I V T+ GK V+ + VKQ+I K E +
Sbjct: 61 YNIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQKIQDK--EGIPPD 118
Query: 151 NQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R + D + E+ +HL++R
Sbjct: 119 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 151
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 24 HRPEKLSNDSILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGREL 82
H +L S+ IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L
Sbjct: 224 HLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQL 283
Query: 83 ARSNSRVRDYGLADGNVLHLVLRL 106
+ + DY + + LHLVLRL
Sbjct: 284 EDGRT-LADYNIQKESTLHLVLRL 306
>gi|290974051|ref|XP_002669760.1| polyubiquitin [Naegleria gruberi]
gi|284083311|gb|EFC37016.1| polyubiquitin [Naegleria gruberi]
Length = 274
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 124 IFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 182
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 183 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDK--EGIPPDQQRL 240
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 241 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 269
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 81/193 (41%), Gaps = 47/193 (24%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGREL------------ 82
IF+ ++ G I + V +D+I +VK +IQ G +Q+L+F G++L
Sbjct: 3 IFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 62
Query: 83 -----------------ARSNSRVR-----------DYGLADG----NVLHLVLRLSDLQ 110
SN + D L + LHLVLRL
Sbjct: 63 KESTLHLTLTGKTITLEVESNDTIENVKYPSRSTKIDLSLVSNWKMESTLHLVLRLRGGM 122
Query: 111 AITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDI 170
I V T+ GK VE + VK +I K E + Q LI G++LED R ++D
Sbjct: 123 QIFVKTLTGKTITLEVESNDTIENVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDY 180
Query: 171 CKRNEAVIHLLVR 183
+ E+ +HL++R
Sbjct: 181 NIQKESTLHLVLR 193
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 200 IFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 258
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 259 QKESTLHLVLRL 270
>gi|357474767|ref|XP_003607669.1| Multidrug resistance protein ABC transporter family [Medicago
truncatula]
gi|355508724|gb|AES89866.1| Multidrug resistance protein ABC transporter family [Medicago
truncatula]
Length = 448
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 226 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 284
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 285 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 342
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 343 KQLEDGRTLADYNIQKESTLHLVLR 367
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 302 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 360
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 361 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 418
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 419 KQLEDGRTLADYNIQKESTLHLVLR 443
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 378 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 436
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 437 TLHLVLRL 444
>gi|92790162|emb|CAI83750.1| Polyubiqutin 4 [Isotricha prostoma]
Length = 143
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 74/140 (52%), Gaps = 3/140 (2%)
Query: 44 VIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLV 103
I + V SD+I +VK +IQ G +Q+L+F G++L N + DY + + LHLV
Sbjct: 2 TITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNIQKESTLHLV 60
Query: 104 LRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELED 163
LRL I V T+ GK VE + VK +I K E + Q LI G++LED
Sbjct: 61 LRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLED 118
Query: 164 QRLITDICKRNEAVIHLLVR 183
R + D + E+ +HL++R
Sbjct: 119 NRTLADYNIQKESTLHLVLR 138
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L N + DY +
Sbjct: 69 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDNRTLADYNI 127
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 128 QKESTLHLVLRL 139
>gi|440789929|gb|ELR11220.1| ubiquitin domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 224
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VKQ+I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|83305995|emb|CAE00783.1| polyubiquitin homolog [Sordaria macrospora]
Length = 208
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 78/145 (53%), Gaps = 4/145 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 67 IFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 125
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VKQ+I K E + Q L
Sbjct: 126 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDK--EGIPPDQQRL 183
Query: 155 ICDGEELEDQRLITDICKRNEAVIH 179
I G++LED R ++D + E+ +H
Sbjct: 184 IFAGKQLEDGRTLSDYNIQKESTLH 208
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 75/139 (53%), Gaps = 3/139 (2%)
Query: 45 IPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVL 104
I + V SD+I +VK +IQ +Q+L+F G++L + + DY + + LHLVL
Sbjct: 1 ITLEVESSDTIDNVKQKIQDKEDIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVL 59
Query: 105 RLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQ 164
RL I V T+ GK VE + VKQ+I K E + Q LI G++LED
Sbjct: 60 RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDK--EGIPPDQQRLIFAGKQLEDG 117
Query: 165 RLITDICKRNEAVIHLLVR 183
R ++D + E+ +HL++R
Sbjct: 118 RTLSDYNIQKESTLHLVLR 136
>gi|330805887|ref|XP_003290908.1| ubiquitin [Dictyostelium purpureum]
gi|325078946|gb|EGC32571.1| ubiquitin [Dictyostelium purpureum]
Length = 229
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|71534894|gb|AAZ32851.1| pentameric polyubiquitin [Medicago sativa]
Length = 189
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 29 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 87
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 88 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 145
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 146 KQLEDGRTLADYNIQKESTLHLVLR 170
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 91 DYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLK 150
DY + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 4 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPD 61
Query: 151 NQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R + D + E+ +HL++R
Sbjct: 62 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 94
>gi|290987764|ref|XP_002676592.1| polyubiquitin [Naegleria gruberi]
gi|290995460|ref|XP_002680313.1| polyubiquitin [Naegleria gruberi]
gi|284090195|gb|EFC43848.1| polyubiquitin [Naegleria gruberi]
gi|284093933|gb|EFC47569.1| polyubiquitin [Naegleria gruberi]
Length = 305
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|302595808|sp|P0CH27.1|RL402_TRYCR RecName: Full=Ubiquitin-60S ribosomal protein L40; Contains:
RecName: Full=Ubiquitin; Contains: RecName: Full=60S
ribosomal protein L40; Flags: Precursor
gi|162337|gb|AAA30271.1| ubiquitin precursor [Trypanosoma cruzi]
Length = 356
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVESSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVESSDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|27734375|gb|AAM51216.1| polyubiquitin [Cercomonas sp. ATCC 50316]
Length = 255
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 84/152 (55%), Gaps = 8/152 (5%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 74 IFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 132
Query: 95 ADGNVLHLVLRL---SDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKN 151
+ LHLVLRL S +Q I V T+ GK VE + VKQ+I K E +
Sbjct: 133 QKESTLHLVLRLRGGSGMQ-IFVKTLTGKTITLDVESSDTIETVKQKIQDK--EGIPPDQ 189
Query: 152 QELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R + D + E+ +HL++R
Sbjct: 190 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 221
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 79/145 (54%), Gaps = 7/145 (4%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + + LH
Sbjct: 3 GKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLH 61
Query: 102 LVLRL---SDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LVLRL S +Q I V T+ GK VE + VKQ+I K E + Q LI G
Sbjct: 62 LVLRLRGGSGMQ-IFVKTLTGKTITLDVESSDTIETVKQKIQDK--EGIPPDQQRLIFAG 118
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 119 KQLEDGRTLADYNIQKESTLHLVLR 143
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 152 IFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 210
Query: 95 ADGNVLHLVLRL---SDLQAITVTTVCGKVFEFHVERGRNVGYVKQ 137
+ LHLVLRL S +Q I V T+ GK VE + VKQ
Sbjct: 211 QKESTLHLVLRLRGGSGMQ-IFVKTLTGKTITLDVESSDTIETVKQ 255
>gi|290984061|ref|XP_002674746.1| polyubiquitin [Naegleria gruberi]
gi|284088338|gb|EFC42002.1| polyubiquitin [Naegleria gruberi]
Length = 229
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|328867151|gb|EGG15534.1| ubiquitin [Dictyostelium fasciculatum]
Length = 380
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 7 TLTGKTITLEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 65
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKAKIQDK--EGIPPDQQRLIFAG 123
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D + E+ +HL++R
Sbjct: 124 KQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 159 TLTGKTITLEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 217
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 218 TLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKAKIQDK--EGIPPDQQRLIFAG 275
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D + E+ +HL++R
Sbjct: 276 KQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 235 TLTGKTITLEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 293
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 294 TLHLVLRL 301
>gi|21554192|gb|AAM63271.1| unknown [Arabidopsis thaliana]
Length = 154
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQXLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|281211832|gb|EFA85994.1| hypothetical protein PPL_01227 [Polysphondylium pallidum PN500]
Length = 385
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 81/150 (54%), Gaps = 3/150 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQI-AKKGREFVDLKNQE 153
+ LHLVLRL I V T+ GK VE + VK +I + R NQ
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQGYRARMVFHPINQR 121
Query: 154 LICDGEELEDQRLITDICKRNEAVIHLLVR 183
LI G++LED R ++D + E+ +HL++R
Sbjct: 122 LIFAGKQLEDGRTLSDYNIQKESTLHLVLR 151
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 234 IFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 292
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 293 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDK--EGIPPDQQRL 350
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 351 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 379
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 81/152 (53%), Gaps = 7/152 (4%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNG---FFVKKQKLVFEGRELARSNSRVRD 91
IF+ ++ G I + V SD+I +VK +IQ Y F Q+L+F G++L + + D
Sbjct: 79 IFVKTLTGKTITLEVEGSDTIENVKTKIQGYRARMVFHPINQRLIFAGKQLEDGRT-LSD 137
Query: 92 YGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKN 151
Y + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 138 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDK--EGIPPDQ 195
Query: 152 QELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R ++D + E+ +HL++R
Sbjct: 196 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 227
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 310 IFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 368
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 369 QKESTLHLVLRL 380
>gi|114152964|gb|ABI52648.1| ubiquitin/40S ribosomal protein S27a fusion protein [Argas
monolakensis]
Length = 232
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|281205784|gb|EFA79973.1| ubiquitin [Polysphondylium pallidum PN500]
Length = 306
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL + V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQVFVKTLTGKTITLEVEGSDTIENVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 159 TLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 217
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL + V T+ GK VE + VK +I K E + Q LI G
Sbjct: 218 TLHLVLRLRGGMQVFVKTLTGKTITLEVEGSDTIENVKTKIQDK--EGIPPDQQRLIFAG 275
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D + E+ +HL++R
Sbjct: 276 KQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 235 TLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 293
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 294 TLHLVLRL 301
>gi|5523969|gb|AAD44037.1|AF104020_1 polyprotein [Bovine viral diarrhea virus 2]
Length = 318
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 3/175 (1%)
Query: 9 SPVLEESLNFPGNFTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGF 68
PV + P + H +L + ++ G I + V SD+I +VK +IQ G
Sbjct: 86 GPVYYQDYAGPVSTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 145
Query: 69 FVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVER 128
+++L+F G++L + + DY + + LHLVLRL I V T+ GK VE
Sbjct: 146 PPDQRRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEP 204
Query: 129 GRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
+ VK +I K E + Q LI G++LED R ++D + E+ +HL++R
Sbjct: 205 SDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 257
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 188 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 246
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 247 QKESTLHLVLRL 258
>gi|242074418|ref|XP_002447145.1| hypothetical protein SORBIDRAFT_06g029360 [Sorghum bicolor]
gi|241938328|gb|EES11473.1| hypothetical protein SORBIDRAFT_06g029360 [Sorghum bicolor]
Length = 153
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKSITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKSITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|355753795|gb|EHH57760.1| Polyubiquitin-C [Macaca fascicularis]
Length = 153
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD++ +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTLENVKAKIQDKEGIPPDQQRLIFAGQQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|37542506|gb|AAL25813.1| polyubiquitin, partial [Prunus avium]
Length = 154
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 4 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 62
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E Q L
Sbjct: 63 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGTPPDQQRL 120
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 121 IFAGKQLEDGRTLADYNIQEESTLHLVLR 149
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 80 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGTPPDQQRLIFAGKQLEDGRT-LADYNI 138
Query: 95 ADGNVLHLVLRL 106
+ + LHLVLRL
Sbjct: 139 QEESTLHLVLRL 150
>gi|357132045|ref|XP_003567643.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Brachypodium
distachyon]
Length = 218
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 89/175 (50%), Gaps = 5/175 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V D+I SVK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESRDTIDSVKAKIQDKEGIPPDQQRLIFAGKQLDDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRAKMQIFVKTLTGKTITLEVESSDTIDNVKAKIHDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVRAK-PVQKDFEVSIEATELNE 208
I G++LED R + D + E+ +HL++R R + P + + I A + NE
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSRGQYPKNLEPNLRILAQKYNE 174
>gi|312380774|gb|EFR26677.1| hypothetical protein AND_07080 [Anopheles darlingi]
Length = 567
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 145 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 203
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 204 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 261
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G++LED R ++D + E+ +HL++
Sbjct: 262 IFAGKQLEDGRTLSDYNIQKESTLHLVL 289
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 99/205 (48%), Gaps = 11/205 (5%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRV-RDYG 93
IF+ ++ G I + V+ ++++ +K +I+ G +Q+++F G++L N R+ DY
Sbjct: 3 IFVKTLTGKTITLDVVPTETVLDIKSKIEEREGIDPDQQRIIFAGKQL--ENGRIISDYN 60
Query: 94 LADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQE 153
+ G+ +HLVLRL I V + GK E V VK+QI + RE + Q
Sbjct: 61 IQHGSTMHLVLRLKGGMQIFVRMLTGKTIAIDTEPEATVESVKKQIDE--REEIPPNQQR 118
Query: 154 LICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVRAKPVQKDFEVS--IEATELNEKGA 211
+I G++LED R + + + + V+ + K + + E S IE + +
Sbjct: 119 MIFAGKQLEDGRTLEEYSIIKATNMQIFVK---TLTGKTITLEVEPSDTIENVKAKIQDK 175
Query: 212 DVVGEHQFETLFMGYQIRERKLLQN 236
+ + Q +F G Q+ + + L +
Sbjct: 176 EGIPPDQQRLIFAGKQLEDGRTLSD 200
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 17/144 (11%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVL- 100
G I + ++ SVK +I +Q+++F G++ L DG L
Sbjct: 86 GKTIAIDTEPEATVESVKKQIDEREEIPPNQQRMIFAGKQ------------LEDGRTLE 133
Query: 101 -HLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGE 159
+ +++ +++Q I V T+ GK VE + VK +I K E + Q LI G+
Sbjct: 134 EYSIIKATNMQ-IFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGK 190
Query: 160 ELEDQRLITDICKRNEAVIHLLVR 183
+LED R ++D + E+ +HL++R
Sbjct: 191 QLEDGRTLSDYNIQKESTLHLVLR 214
>gi|27734371|gb|AAM51214.1| polyubiquitin [Cercomonas sp. ATCC 50316]
gi|27734373|gb|AAM51215.1| polyubiquitin [Cercomonas sp. ATCC 50316]
Length = 177
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 79/145 (54%), Gaps = 7/145 (4%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + + LH
Sbjct: 3 GKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLH 61
Query: 102 LVLRL---SDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LVLRL S +Q I V T+ GK VE + VKQ+I K E + Q LI G
Sbjct: 62 LVLRLRGGSGMQ-IFVKTLTGKTITLDVESSDTIETVKQKIQDK--EGIPPDQQRLIFAG 118
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 119 KQLEDGRTLADYNIQKESTLHLVLR 143
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 74 IFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 132
Query: 95 ADGNVLHLVLRL---SDLQAITVTTVCGKVFEFHVERGRNVGYVKQ 137
+ LHLVLRL S +Q I V T+ GK VE + VKQ
Sbjct: 133 QKESTLHLVLRLRGGSGMQ-IFVKTLTGKTITLDVESSDTIETVKQ 177
>gi|290986589|ref|XP_002676006.1| polyubiquitin [Naegleria gruberi]
gi|284089606|gb|EFC43262.1| polyubiquitin [Naegleria gruberi]
Length = 153
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 80/149 (53%), Gaps = 3/149 (2%)
Query: 35 LIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
L ++ G I + V +DSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 LFVKTLTGKTITLEVESNDSIENVKSKIQEKEGISPDQQRLIFGGKQLEDGRT-INDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL + V T+ GK +E + +KQ+I K E + Q L
Sbjct: 62 QKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMEANDTIENMKQKIFDK--EGIPSDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R I+D + ++ +HL++R
Sbjct: 120 IYAGKQLEDGRTISDYNLQKDSTVHLVLR 148
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 35 LIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
L ++ G I + + +D+I ++K +I G +Q+L++ G++L + + DY L
Sbjct: 79 LFVKTLTGKTITIEMEANDTIENMKQKIFDKEGIPSDQQRLIYAGKQLEDGRT-ISDYNL 137
Query: 95 ADGNVLHLVLRL 106
+ +HLVLRL
Sbjct: 138 QKDSTVHLVLRL 149
>gi|357512381|ref|XP_003626479.1| Ubiquitin-like protein [Medicago truncatula]
gi|355501494|gb|AES82697.1| Ubiquitin-like protein [Medicago truncatula]
Length = 277
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 55 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 113
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 114 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 171
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 172 KQLEDGRTLADYNIQKESTLHLVLR 196
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 131 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 189
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 190 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 247
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 248 KQLEDGRTLADYNIQKESTLHLVLR 272
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 207 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 265
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 266 TLHLVLRL 273
>gi|90075190|dbj|BAE87275.1| unnamed protein product [Macaca fascicularis]
Length = 157
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDIIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDIIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|3954791|emb|CAA26488.1| unnamed protein product [Gallus gallus]
Length = 157
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 7 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 65
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q
Sbjct: 66 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRW 123
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 124 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 152
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+ +F G++L + + DY +
Sbjct: 83 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRWIFAGKQLEDGRT-LSDYNI 141
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 142 QKESTLHLVLRL 153
>gi|290974830|ref|XP_002670147.1| ubiquitin [Naegleria gruberi]
gi|284083703|gb|EFC37403.1| ubiquitin [Naegleria gruberi]
Length = 152
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 35 LIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
L ++ G I + V +DSI +VK ++Q G +Q+L+F G++L + + DY +
Sbjct: 3 LFVKTLTGRTITLEVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQLEDGRT-INDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL + V T+ GK +E V +KQ+I K E + Q L
Sbjct: 62 QKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDK--EGIPSDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R I D + ++ +HL++R
Sbjct: 120 IYAGKQLEDGRTINDYNLQKDSTVHLVLR 148
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 35 LIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
L ++ G I + + +D++ ++K +I G +Q+L++ G++L + + DY L
Sbjct: 79 LFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQRLIYAGKQLEDGRT-INDYNL 137
Query: 95 ADGNVLHLVLRL 106
+ +HLVLRL
Sbjct: 138 QKDSTVHLVLRL 149
>gi|357474765|ref|XP_003607668.1| Multidrug resistance protein ABC transporter family [Medicago
truncatula]
gi|355508723|gb|AES89865.1| Multidrug resistance protein ABC transporter family [Medicago
truncatula]
Length = 497
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 226 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 284
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 285 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 342
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 343 KQLEDGRTLADYNIQKESTLHLVLR 367
>gi|118370588|ref|XP_001018495.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|89300262|gb|EAR98250.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
Length = 854
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 3/148 (2%)
Query: 36 IFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLA 95
I +++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 554 IKITLTGKTITLDVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQ 612
Query: 96 DGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELI 155
+ LHLVLRL I V T+ GK VE + VK +I K E + Q LI
Sbjct: 613 KESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDK--EGIPPDQQRLI 670
Query: 156 CDGEELEDQRLITDICKRNEAVIHLLVR 183
G++LED R ++D + E+ +HL++R
Sbjct: 671 FAGKQLEDGRTLSDYNIQKESTLHLVLR 698
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 709 TLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 767
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 768 TLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDK--EGIPPDQQRLIFAG 825
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D + E+ +HL++R
Sbjct: 826 KQLEDGRTLSDYNIQKESTLHLVLR 850
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 785 TLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 843
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 844 TLHLVLRL 851
>gi|388518367|gb|AFK47245.1| unknown [Medicago truncatula]
Length = 233
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTIILEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
+ G++LED R + D + E+ +HL++R
Sbjct: 120 VFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+LVF G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLVFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V + GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKALTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLADNNIQKESTLHLVLR 224
>gi|294942504|ref|XP_002783557.1| Ubiquitin D, putative [Perkinsus marinus ATCC 50983]
gi|239896054|gb|EER15353.1| Ubiquitin D, putative [Perkinsus marinus ATCC 50983]
Length = 163
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|342186084|emb|CCC95569.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 961
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEEGRTLADYNIQKESTLHLVLR 148
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEEGRTLADYNIQKESTLHLVLR 300
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEEGRTLADYNIQKESTLHLVLR 452
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LADYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R + D + E+ +HL++R
Sbjct: 576 IFAGKQLEEGRTLADYNIQKESTLHLVLR 604
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LADYNI 669
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 670 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDK--EGIPPDQQRL 727
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R + D + E+ +HL++R
Sbjct: 728 IFAGKQLEEGRTLADYNIQKESTLHLVLR 756
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 763 IFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LADYNI 821
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 822 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDK--EGIPPDQQRL 879
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R + D + E+ +HL++R
Sbjct: 880 IFAGKQLEEGRTLADYNIQKESTLHLVLR 908
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 839 IFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LADYNI 897
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGK 120
+ LHLVLRL I V T+ G+
Sbjct: 898 QKESTLHLVLRLRGGMQIFVKTLPGR 923
>gi|414865716|tpg|DAA44273.1| TPA: Ubiquitin fusion protein [Zea mays]
Length = 205
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|27734387|gb|AAM51222.1| polyubiquitin [Euglypha rotunda]
Length = 177
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 78/145 (53%), Gaps = 7/145 (4%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + LH
Sbjct: 3 GKTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNVTKEATLH 61
Query: 102 LVLRL---SDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LVLRL S +Q I V T+ GK VE + VKQ+I K E + Q LI G
Sbjct: 62 LVLRLRGGSGMQ-IFVKTLTGKTITLDVEASDTIENVKQKIQDK--EGIPPDQQRLIFAG 118
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D EA +HL++R
Sbjct: 119 KQLEDGRTLSDYNVTKEATLHLVLR 143
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 57/106 (53%), Gaps = 6/106 (5%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 74 IFVKTLTGKTITLDVEASDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNV 132
Query: 95 ADGNVLHLVLRL---SDLQAITVTTVCGKVFEFHVERGRNVGYVKQ 137
LHLVLRL S +Q I V T+ GK VE + VKQ
Sbjct: 133 TKEATLHLVLRLRGGSGMQ-IFVKTLTGKTITLDVEASDTIENVKQ 177
>gi|357440433|ref|XP_003590494.1| Ubiquitin [Medicago truncatula]
gi|355479542|gb|AES60745.1| Ubiquitin [Medicago truncatula]
Length = 312
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 7 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 65
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 66 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 123
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 124 KQLEDGRTLADYNIQKESTLHLVLR 148
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 75/143 (52%), Gaps = 3/143 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 83 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 141
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 142 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 199
Query: 159 EELEDQRLITDICKRNEAVIHLL 181
++LED R + D + E+ +HL+
Sbjct: 200 KQLEDGRTLADYNIQKESTLHLV 222
>gi|339232978|ref|XP_003381606.1| ubiquitin family protein [Trichinella spiralis]
gi|316979561|gb|EFV62340.1| ubiquitin family protein [Trichinella spiralis]
Length = 315
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 73 TLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 131
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE V VK +I K E + Q LI G
Sbjct: 132 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTVENVKGKIQDK--EGIPPDQQRLIFAG 189
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D + E+ +HL++R
Sbjct: 190 KQLEDSRTLSDYNIQKESTLHLVLR 214
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
Query: 49 VMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSD 108
V SD+I +VK +IQ G +Q+L+F G++L + + DY + + LHLVLRL
Sbjct: 7 VEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRG 65
Query: 109 LQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLIT 168
I V T+ GK VE + VK +I K E + Q LI G++LED R ++
Sbjct: 66 GMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDK--EGIPPDQQRLIFAGKQLEDGRTLS 123
Query: 169 DICKRNEAVIHLLVR 183
D + E+ +HL++R
Sbjct: 124 DYNIQKESTLHLVLR 138
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD++ +VK +IQ G +Q+L+F G++L S + + DY + +
Sbjct: 149 TLTGKTITLEVEPSDTVENVKGKIQDKEGIPPDQQRLIFAGKQLEDSRT-LSDYNIQKES 207
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHV 126
LHLVLRL I ++ C K+ + V
Sbjct: 208 TLHLVLRLRGGCGIFLSHRCWKIMMWTV 235
>gi|61889379|emb|CAI51312.2| polyubiquitin [Capsicum chinense]
Length = 153
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 7 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 65
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLR I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 66 TLHLVLRFRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 123
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 124 KQLEDGRTLADYNIQKESTLHLVLR 148
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 83 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 141
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 142 TLHLVLRL 149
>gi|217074596|gb|ACJ85658.1| unknown [Medicago truncatula]
Length = 228
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTIILEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
+ G++LED R + D + E+ +HL++R
Sbjct: 120 VFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 73/147 (49%), Gaps = 5/147 (3%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+LVF G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLVFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V + GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKALTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLL 181
I G L L + I + E+ +HL+
Sbjct: 196 IFAGNNLRMGGL-SLIYIQKESTLHLV 221
>gi|281212331|gb|EFA86491.1| hypothetical protein PPL_00285 [Polysphondylium pallidum PN500]
Length = 1074
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 21/149 (14%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLR-----------------GVEGSDTIENVKTKIQDK--EGIPPDQQRL 254
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 255 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 283
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 44 VIPMRVME-SDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHL 102
V+ +R +E SD+I +VK +IQ G +Q+L+F G++L + + DY + + LHL
Sbjct: 222 VLRLRGVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHL 280
Query: 103 VLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK 142
VLRL I V T+ GK VE + VK +I K
Sbjct: 281 VLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDK 320
>gi|388516797|gb|AFK46460.1| unknown [Medicago truncatula]
Length = 153
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 7 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 65
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 66 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 123
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E +HL++R
Sbjct: 124 KQLEDGRTLADYNIQKEFTLHLVLR 148
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 83 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKEF 141
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 142 TLHLVLRL 149
>gi|27734369|gb|AAM51213.1| polyubiquitin [Cercomonas sp. ATCC 50316]
Length = 177
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 78/145 (53%), Gaps = 7/145 (4%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + + LH
Sbjct: 3 GKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLH 61
Query: 102 LVLRL---SDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LVLRL S +Q I V T+ GK VE + VKQ+I K E + Q LI G
Sbjct: 62 LVLRLRGGSGMQ-IFVKTLTGKTITLDVESSDTIETVKQKIQDK--EGIPPDQQRLIFAG 118
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
+LED R + D + E+ +HL++R
Sbjct: 119 RQLEDGRTLADYNIQKESTLHLVLR 143
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F GR+L + + DY +
Sbjct: 74 IFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGRQLEDGRT-LADYNI 132
Query: 95 ADGNVLHLVLRL---SDLQAITVTTVCGKVFEFHVERGRNVGYVKQ 137
+ LHLVLRL S +Q I V T+ GK VE + VKQ
Sbjct: 133 QKESTLHLVLRLRGGSGMQ-IFVKTLTGKTITLDVESSDTIETVKQ 177
>gi|145495350|ref|XP_001433668.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400787|emb|CAK66271.1| unnamed protein product [Paramecium tetraurelia]
Length = 154
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 81/151 (53%), Gaps = 4/151 (2%)
Query: 34 ILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDY 92
I IF+ ++ G I + V D+I +VK +IQ G +Q+L+F G++L + ++DY
Sbjct: 2 IQIFVKTLTGKTITLDVKSEDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LQDY 60
Query: 93 GLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQ 152
+ + LHLVLRL I V + GK VE + + +K +I K E + Q
Sbjct: 61 NIQKESTLHLVLRLRGGMQIFVKNLSGKTITLDVEPDQTIDMIKSKIQDK--EGIPPDQQ 118
Query: 153 ELICDGEELEDQRLITDICKRNEAVIHLLVR 183
LI G++LED R + D + E+ IHL++R
Sbjct: 119 RLIFAGKQLEDGRTLGDYNIQKESTIHLVLR 149
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V +I +K +IQ G +Q+L+F G++L + + DY + +
Sbjct: 84 NLSGKTITLDVEPDQTIDMIKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LGDYNIQKES 142
Query: 99 VLHLVLRL 106
+HLVLRL
Sbjct: 143 TIHLVLRL 150
>gi|2209091|gb|AAB61405.1| ubiquitin [Tetrahymena vorax]
Length = 153
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGIT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|346321308|gb|EGX90907.1| RING and UBP finger domain protein [Cordyceps militaris CM01]
Length = 776
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 78/148 (52%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G++LED R ++D + E+ +HL
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLYT 147
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R ++D
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 172 KRNEAVIHLLVR 183
+ E+ +HL++R
Sbjct: 61 IQKESTLHLVLR 72
>gi|145503723|ref|XP_001437835.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404993|emb|CAK70438.1| unnamed protein product [Paramecium tetraurelia]
Length = 271
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 82/151 (54%), Gaps = 3/151 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 7 TLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 65
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I + T+ G++ VE +V +K+QI K E + Q LI G
Sbjct: 66 TLHLVLRLRGGMQIFIKTLTGRLINLDVESTDSVESLKKQIQDK--EGIPPNQQRLIFSG 123
Query: 159 EELEDQRLITDICKRNEAVIHLLVRKSAKVR 189
+LED++ + + NE+ IHL++R + R
Sbjct: 124 HQLEDEKTLLEYNVENESTIHLVLRLMVRCR 154
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G +I + V +DS+ S+K +IQ G +Q+L+F G +L + + +Y +
Sbjct: 79 IFIKTLTGRLINLDVESTDSVESLKKQIQDKEGIPPNQQRLIFSGHQLEDEKT-LLEYNV 137
Query: 95 ADGNVLHLVLRL 106
+ + +HLVLRL
Sbjct: 138 ENESTIHLVLRL 149
>gi|74024980|ref|XP_829056.1| polyubiquitin [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|70834442|gb|EAN79944.1| polyubiquitin, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 685
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEEGRTLADYNIQKESTLHLVLR 148
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LADYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R + D + E+ +HL++R
Sbjct: 272 IFAGKQLEEGRTLADYNIQKESTLHLVLR 300
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LADYNI 365
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDK--EGIPPDQQRL 423
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R + D + E+ +HL++R
Sbjct: 424 IFAGKQLEEGRTLADYNIQKESTLHLVLR 452
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 459 IFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LADYNI 517
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDK--EGIPPDQQRL 575
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R + D + E+ +HL++R
Sbjct: 576 IFAGKQLEEGRTLADYNIQKESTLHLVLR 604
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 535 IFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LADYNI 593
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 594 QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDK--EGIPPDQQRL 651
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R + D + E+ +HL++R
Sbjct: 652 IFAGKQLEEGRTLADYNIQKESTLHLVLR 680
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 611 IFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT-LADYNI 669
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 670 QKESTLHLVLRL 681
>gi|27734383|gb|AAM51220.1| polyubiquitin [Euglypha rotunda]
gi|27734385|gb|AAM51221.1| polyubiquitin [Euglypha rotunda]
Length = 177
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 78/145 (53%), Gaps = 7/145 (4%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + LH
Sbjct: 3 GKTITLDVEASDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNVTKEATLH 61
Query: 102 LVLRL---SDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LVLRL S +Q I V T+ GK VE + VKQ+I K E + Q LI G
Sbjct: 62 LVLRLRGGSGMQ-IFVKTLTGKTITLDVEASDTIENVKQKIQDK--EGIPPDQQRLIFAG 118
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D EA +HL++R
Sbjct: 119 KQLEDGRTLSDYNVTKEATLHLVLR 143
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 57/106 (53%), Gaps = 6/106 (5%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 74 IFVKTLTGKTITLDVEASDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNV 132
Query: 95 ADGNVLHLVLRL---SDLQAITVTTVCGKVFEFHVERGRNVGYVKQ 137
LHLVLRL S +Q I V T+ GK VE + VKQ
Sbjct: 133 TKEATLHLVLRLRGGSGMQ-IFVKTLTGKTITLDVEASDTIENVKQ 177
>gi|3789942|gb|AAC67552.1| polyubiquitin [Saccharum hybrid cultivar H32-8560]
Length = 381
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRX 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+ +F G++L + + Y +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRXIFAGKQLEDGRT-LAXYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + Y +
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LAXYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRX 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + + E+ +HL++R
Sbjct: 272 IFAGKQLEDGRTLAXYNIQKESTLHLVLR 300
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|164510220|emb|CAJ41450.1| ubiquitin [Alvinella caudata]
Length = 152
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LGDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLV RL I V T+ GK VE N+ VK +I K E + Q L
Sbjct: 62 QKESTLHLVPRLRGGMQIFVKTLTGKTITLEVEASDNIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLGDYNIQKESTLHLVLR 148
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEASDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LGDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|290991538|ref|XP_002678392.1| polyubiquitin [Naegleria gruberi]
gi|284092004|gb|EFC45648.1| polyubiquitin [Naegleria gruberi]
Length = 152
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 35 LIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
L ++ G I + V +DSI +VK ++Q G +Q+L+F G++L + + DY +
Sbjct: 3 LFVKTLTGRTITLEVESNDSIENVKQKVQDKEGISPDQQRLIFAGKQLEDGRT-INDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL + V T+ GK +E V +KQ+I K E + Q L
Sbjct: 62 QKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDK--EGIPSDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R I D + ++ +HL++R
Sbjct: 120 IYAGKQLEDGRTIGDYNLQKDSTVHLVLR 148
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 35 LIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
L ++ G I + + +D++ ++K +I G +Q+L++ G++L + + DY L
Sbjct: 79 LFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQRLIYAGKQLEDGRT-IGDYNL 137
Query: 95 ADGNVLHLVLRL 106
+ +HLVLRL
Sbjct: 138 QKDSTVHLVLRL 149
>gi|118370592|ref|XP_001018497.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|89300264|gb|EAR98252.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
Length = 384
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 13/211 (6%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + SDSI VK +IQ G +Q+L+F G++L S + DY +
Sbjct: 3 IFVKTLTGKTITLNTEVSDSIQDVKAKIQDKEGIPPDQQRLIFAGKQLDDGRS-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK +E V VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTVTLDLEPCDTVENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVSIEATELN 207
I G++L+D R ++D + E+ +HL++R ++ K V D E S +
Sbjct: 120 IFAGKQLDDSRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDIEASDTIENIK 179
Query: 208 EKGADVVG--EHQFETLFMGYQIRERKLLQN 236
K D G Q +F G Q+ + + +Q+
Sbjct: 180 AKIQDKEGIPPDQQRLIFAGKQLDDGRTVQD 210
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G + + + D++ +VK +IQ G +Q+L+F G++L S + + DY +
Sbjct: 79 IFVKTLTGKTVTLDLEPCDTVENVKAKIQDKEGIPPDQQRLIFAGKQLDDSRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK +E + +K +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTVTLDIEASDTIENIKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++L+D R + D + E+ +HL++R
Sbjct: 196 IFAGKQLDDGRTVQDYNIQKESTLHLVLR 224
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G + + + D+I +VK +IQ +Q+L+F G++L S + + DY +
Sbjct: 231 IFVKTLTGKTVTLDLDPCDTIENVKAKIQDKERIPPDQQRLIFAGKQLDDSRT-LSDYNI 289
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 290 QRESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIDNVKAKIQDK--EGIPPDQQRL 347
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G+ LED R +TD + E+ +HL++R
Sbjct: 348 IFSGKCLEDTRKLTDYNIQKESTLHLVLR 376
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G+ L + ++ DY +
Sbjct: 307 IFVKTLTGKTITLDVESSDTIDNVKAKIQDKEGIPPDQQRLIFSGKCLEDTR-KLTDYNI 365
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 366 QKESTLHLVLRL 377
>gi|290971589|ref|XP_002668572.1| polyubiquitin [Naegleria gruberi]
gi|290973569|ref|XP_002669520.1| polyubiquitin [Naegleria gruberi]
gi|290982657|ref|XP_002674046.1| polyubiquitin [Naegleria gruberi]
gi|290987245|ref|XP_002676333.1| polyubiquitin [Naegleria gruberi]
gi|290987329|ref|XP_002676375.1| polyubiquitin [Naegleria gruberi]
gi|290997377|ref|XP_002681258.1| polyubiquitin [Naegleria gruberi]
gi|284082037|gb|EFC35828.1| polyubiquitin [Naegleria gruberi]
gi|284083069|gb|EFC36776.1| polyubiquitin [Naegleria gruberi]
gi|284087634|gb|EFC41302.1| polyubiquitin [Naegleria gruberi]
gi|284089935|gb|EFC43589.1| polyubiquitin [Naegleria gruberi]
gi|284089977|gb|EFC43631.1| polyubiquitin [Naegleria gruberi]
gi|284094881|gb|EFC48514.1| polyubiquitin [Naegleria gruberi]
Length = 152
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 35 LIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
L ++ G I + V +DSI +VK ++Q G +Q+L+F G++L + + DY +
Sbjct: 3 LFVKTLTGRTITLEVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQLEDGRT-INDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL + V T+ GK +E V +KQ+I K E + Q L
Sbjct: 62 QKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDK--EGIPSDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R I D + ++ +HL++R
Sbjct: 120 IYAGKQLEDGRTIGDYNLQKDSTVHLVLR 148
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 35 LIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
L ++ G I + + +D++ ++K +I G +Q+L++ G++L + + DY L
Sbjct: 79 LFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQRLIYAGKQLEDGRT-IGDYNL 137
Query: 95 ADGNVLHLVLRL 106
+ +HLVLRL
Sbjct: 138 QKDSTVHLVLRL 149
>gi|27734357|gb|AAM51207.1| polyubiquitin [Cercomonas edax]
gi|27734367|gb|AAM51212.1| polyubiquitin [Cercomonas edax]
Length = 177
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 79/145 (54%), Gaps = 7/145 (4%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + + LH
Sbjct: 3 GKTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLH 61
Query: 102 LVLRL---SDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LVLRL S +Q I V T+ GK VE + VKQ+I K E + Q LI G
Sbjct: 62 LVLRLRGGSGMQ-IFVKTLTGKTITLDVESSDTIENVKQKIQDK--EGIPPDQQRLIFAG 118
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 119 KQLEDGRTLADYNIQKESTLHLVLR 143
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 74 IFVKTLTGKTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 132
Query: 95 ADGNVLHLVLRL---SDLQAITVTTVCGKVFEFHVERGRNVGYVKQ 137
+ LHLVLRL S +Q I V T+ GK VE + VKQ
Sbjct: 133 QKESTLHLVLRLRGGSGMQ-IFVKTLTGKTITLDVESSDTIENVKQ 177
>gi|320162850|gb|EFW39749.1| polyubiquitin 5 [Capsaspora owczarzaki ATCC 30864]
Length = 218
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|567767|gb|AAA53067.1| p125 protein, partial [Bovine viral diarrhea virus 1]
Length = 1054
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 349 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 407
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 408 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 465
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 466 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 494
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 98 NVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICD 157
+ LHLVLRL I V T+ GK VE + VK +I K E + Q LI
Sbjct: 335 STLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFA 392
Query: 158 GEELEDQRLITDICKRNEAVIHLLVR 183
G++LED R ++D + E+ +HL++R
Sbjct: 393 GKQLEDGRTLSDYNIQKESTLHLVLR 418
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 425 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 483
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 484 QKESTLHLVLRL 495
>gi|164510214|emb|CAJ41447.1| polyubiquitin [Paralvinella grasslei]
Length = 304
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIENVKTKIQDK--EGIPPDQQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G++LED R ++D + E+ +HL++
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVL 299
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LGDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + + L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIDNVKAKIQDK--EGIPPDQRRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + ++ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKKSTLHLVLR 148
>gi|27734361|gb|AAM51209.1| polyubiquitin [Cercomonas edax]
Length = 177
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 79/145 (54%), Gaps = 7/145 (4%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + + LH
Sbjct: 3 GKTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLH 61
Query: 102 LVLRL---SDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LVLRL S +Q I V T+ GK VE + VKQ+I K E + Q LI G
Sbjct: 62 LVLRLRGGSGMQ-IFVKTLTGKTITLDVESSDTIENVKQKIQDK--EGIPPDQQRLIFAG 118
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 119 KQLEDGRTLADYNIQKESTLHLVLR 143
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 6/106 (5%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 74 IFVKTLTGKTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 132
Query: 95 ADGNVLHLVLRL---SDLQAITVTTVCGKVFEFHVERGRNVGYVKQ 137
+ LHLVLRL S +Q I V T+ GK VE +G VKQ
Sbjct: 133 QKESTLHLVLRLRGGSGMQ-IFVKTLTGKTITLDVESSDTIGNVKQ 177
>gi|118370602|ref|XP_001018502.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|89300269|gb|EAR98257.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
Length = 228
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + + SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDIEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + +K +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTVTLDVEATDTIENIKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G + + V +D+I ++K +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTVTLDVEATDTIENIKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + +K +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENIKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I ++K +IQ G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLDVESSDTIENIKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|395536787|ref|XP_003770393.1| PREDICTED: polyubiquitin-C-like, partial [Sarcophilus harrisii]
Length = 243
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 75/139 (53%), Gaps = 3/139 (2%)
Query: 45 IPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVL 104
I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + + LHLVL
Sbjct: 66 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVL 124
Query: 105 RLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQ 164
RL I V T+ GK VE + VK +I K E + Q LI G++LED
Sbjct: 125 RLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDG 182
Query: 165 RLITDICKRNEAVIHLLVR 183
R ++D + E+ +HL++R
Sbjct: 183 RTLSDYNIQKESTLHLVLR 201
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 132 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 190
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVE 127
+ LHLVLRL I V T+ GK VE
Sbjct: 191 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 223
>gi|392569339|gb|EIW62512.1| ubiquitin-domain-containing protein [Trametes versicolor FP-101664
SS1]
Length = 769
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 4/154 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 126 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 184
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + K +I K E + Q L
Sbjct: 185 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNSKAKIQDK--EGIPPDQQRL 242
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKV 188
I G++LED R ++D + E+ +HL+ + +V
Sbjct: 243 IFAGKQLEDGRTLSDYNIQKESTLHLVWSDATQV 276
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 16/160 (10%)
Query: 32 DSILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVK-------KQKLVFEGRELA 83
D++ +L ++ G I + V SD+I +VK +IQ G + +Q+L+F G++L
Sbjct: 44 DTMQTYLKTLTGKTITLEVESSDTIDNVKAKIQDKEGTDIPSASLPPDQQRLIFAGKQLE 103
Query: 84 RSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKG 143
+ + DY + + LH L +Q I V T+ GK VE + VK +I K
Sbjct: 104 DGRT-LSDYSIQKESTLH----LGGMQ-IFVKTLTGKTITLEVESSDTIDNVKAKIQDK- 156
Query: 144 REFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
E + Q LI G++LED R ++D + E+ +HL++R
Sbjct: 157 -EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 195
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 112/241 (46%), Gaps = 19/241 (7%)
Query: 25 RPEKLSNDSILIFLS--VGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGREL 82
R L +S+LIF+ G I + SD+I +VK I G +Q+L+F G++L
Sbjct: 371 RIHTLMTNSMLIFVKNPTVGKTIALEADSSDTIENVKAMIHDKEGVAPNQQRLIFAGKQL 430
Query: 83 ARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK 142
S V DY + G+ + L+ R+ D I+V T+ GK V+ +G +K +I +
Sbjct: 431 D-SRRTVSDYNMRKGSTVFLIFRVLDGMQISVKTLSGKTITLEVKPLDTIGSIKTKI--Q 487
Query: 143 GREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVRAKPVQKDFEVSIE 202
+E Q + +ELE+ R + D + + + L+ R V+ ++ + ++
Sbjct: 488 AKEGTPPDQQCVKFADDELEEDRTLLDYNIQWNSTLQLVGRFQIFVKRALTRETTPLEVK 547
Query: 203 AT----ELNEKGAD---VVGEHQFETLFMGYQIRERKLLQNDLLLEPLIVESNFKLPLMI 255
++ ++ EK D V HQ +F G KLLQ+ +L ++ L L+I
Sbjct: 548 SSDTIKDVKEKYQDKEGVAPAHQ-RLIFAG------KLLQDGCVLSDCGIQKESTLHLVI 600
Query: 256 K 256
+
Sbjct: 601 R 601
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 7/137 (5%)
Query: 46 PMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLR 105
P+ V SD+I VK + Q G Q+L+F G+ L + + D G+ + LHLV+R
Sbjct: 543 PLEVKSSDTIKDVKEKYQDKEGVAPAHQRLIFAGK-LLQDGCVLSDCGIQKESTLHLVIR 601
Query: 106 LSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELI-CDGEELEDQ 164
L +Q I V + GK + +G V+++I R+ + ++ G+ELED
Sbjct: 602 LPGMQ-IFVKSFTGKTITIKAKPSDTIGRVREKI----RDVEGISPDSILKFAGKELEDG 656
Query: 165 RLITDICKRNEAVIHLL 181
RL++D + E +HL+
Sbjct: 657 RLLSDYNIQGEDTLHLI 673
>gi|380446928|gb|AFD53810.1| ubiquitin, partial [Trichoderma harzianum]
Length = 264
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 33 SILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRD 91
++ IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + D
Sbjct: 5 TMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSD 63
Query: 92 YGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKN 151
Y + + LHLVLRL I V T+ K VE + VK +I K E +
Sbjct: 64 YNIQKESTLHLVLRLRGGMQIFVKTLTWKTVTLEVESSDTIDNVKSKIQDK--EGIPPDQ 121
Query: 152 QELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R ++D + E+ +HL++R
Sbjct: 122 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 153
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Query: 44 VIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLV 103
+ + V SD+I +VK +IQ G +Q+L+F G++L + + DY + + LHLV
Sbjct: 93 TVTLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLV 151
Query: 104 LRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELED 163
LRL I V T+ GK VE + VK +I K E + Q LI G++LED
Sbjct: 152 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLED 209
Query: 164 QRLITDICKRNEAVIHLLVR 183
R ++D + E+ +HL++R
Sbjct: 210 GRTLSDYXIQXESTLHLVLR 229
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 160 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYXI 218
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYV 135
+ LHLVLRL I V T+ GK VE + V
Sbjct: 219 QXESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 259
>gi|197129052|gb|ACH45550.1| putative ubiquitin C variant 1 [Taeniopygia guttata]
Length = 245
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + D +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDDNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITD 169
I G++LED R ++D
Sbjct: 196 IFAGKQLEDGRTLSD 210
>gi|54300702|gb|AAV33127.1| ubiquitin C splice variant [Homo sapiens]
Length = 153
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++ + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSGYNIQKESTLHLVLR 148
>gi|254540256|gb|ACT66230.1| polyubiquitin protein [Piriformospora indica]
Length = 196
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 75/139 (53%), Gaps = 3/139 (2%)
Query: 45 IPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVL 104
I + V SD++ +VK +IQ G +Q+L+F G++L + + DY + + LHLVL
Sbjct: 4 ITLEVESSDTMDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVL 62
Query: 105 RLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQ 164
RL I V T+ GK VE + VK +I K E + Q LI G++LED
Sbjct: 63 RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDG 120
Query: 165 RLITDICKRNEAVIHLLVR 183
R ++D + E+ +HL++R
Sbjct: 121 RTLSDYNIQKESTLHLVLR 139
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 70 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 128
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 129 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRL 186
Query: 155 ICDGE 159
I G+
Sbjct: 187 IFAGQ 191
>gi|218198733|gb|EEC81160.1| hypothetical protein OsI_24083 [Oryza sativa Indica Group]
gi|222636075|gb|EEE66207.1| hypothetical protein OsJ_22339 [Oryza sativa Japonica Group]
Length = 240
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 82/155 (52%), Gaps = 4/155 (2%)
Query: 30 SNDSILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSR 88
+ S+ IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L +
Sbjct: 50 ATPSMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT- 108
Query: 89 VRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVD 148
+ DY + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 109 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLAVESSDKIDNVKAKIQDK--EGIP 166
Query: 149 LKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI ++LED R + D + E+ +HL++R
Sbjct: 167 PDQQRLIFADKQLEDGRTLADYNIQKESTLHLVLR 201
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD I +VK +IQ G +Q+L+F ++L + + DY +
Sbjct: 132 IFVKTLTGKTITLAVESSDKIDNVKAKIQDKEGIPPDQQRLIFADKQLEDGRT-LADYNI 190
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 191 QKESTLHLVLRL 202
>gi|290983078|ref|XP_002674256.1| polyubiquitin [Naegleria gruberi]
gi|284087845|gb|EFC41512.1| polyubiquitin [Naegleria gruberi]
Length = 152
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 80/149 (53%), Gaps = 3/149 (2%)
Query: 35 LIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
L ++ G I + V +DSI +VK ++Q G +Q+L+F G++L + + DY +
Sbjct: 3 LFVKTLTGRTITLEVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQLEDGRT-INDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL + V T+ GK +E V +KQ+I K E + Q L
Sbjct: 62 QKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESIDTVENMKQKIFDK--EGIPSDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R I+D + ++ +HL++R
Sbjct: 120 IYAGKQLEDGRTISDYNLQKDSTVHLVLR 148
>gi|221122833|ref|XP_002155023.1| PREDICTED: polyubiquitin-C, partial [Hydra magnipapillata]
Length = 530
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 78/151 (51%), Gaps = 3/151 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V +D+I +VK RIQ GF +Q+L+F G+EL + + Y + +
Sbjct: 306 TLTGKTITLEVELADTIENVKARIQDKKGFLPDQQRLIFAGKEL-EDDRTLSYYNVQKES 364
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E V L Q L G
Sbjct: 365 TLHLVLRLRGSMNIFVKTLTGKTITLEVEPADTIDNVKAKIHDK--EGVPLDQQSLFFAG 422
Query: 159 EELEDQRLITDICKRNEAVIHLLVRKSAKVR 189
+ELE++R ++D + + + L +R +R
Sbjct: 423 KELENERTLSDYNIQKKYTLDLFLRIEGGMR 453
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 92/191 (48%), Gaps = 21/191 (10%)
Query: 10 PVLEESLNFPGNFTHRPEKLSNDSIL----------------IFL-SVGGSVIPMRVMES 52
P ++ L F GN LS+ +IL IF+ ++ G I + V +
Sbjct: 109 PPDQQRLFFAGNILKDERTLSDYNILKESILQHVLRLEGDMKIFVKTLTGKTITLEVEPA 168
Query: 53 DSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAI 112
D+I +VK +IQ GF +Q+L+F G+EL + + Y + + LHLVLRL I
Sbjct: 169 DTIENVKAKIQDKEGFLPDQQRLIFAGKEL-EDDRTLSYYNVQKESTLHLVLRLRGGMQI 227
Query: 113 TVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICK 172
V T+ GK F VE + VK +I K E V Q LI G LED L +D
Sbjct: 228 FVKTLTGKTFTLEVEPANTIDEVKAKICDK--EGVPPDQQRLIFHGILLEDATL-SDCNV 284
Query: 173 RNEAVIHLLVR 183
+ ++V+ L++R
Sbjct: 285 QKKSVLQLVLR 295
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 4/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G + V +++I VK +I G +Q+L+F G + ++ + D + +
Sbjct: 231 TLTGKTFTLEVEPANTIDEVKAKICDKEGVPPDQQRLIFHG--ILLEDATLSDCNVQKKS 288
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
VL LVLRL I V T+ GK VE + VK +I K D Q LI G
Sbjct: 289 VLQLVLRLRGGMQIFVKTLTGKTITLEVELADTIENVKARIQDKKGFLPD--QQRLIFAG 346
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
+ELED R ++ + E+ +HL++R
Sbjct: 347 KELEDDRTLSYYNVQKESTLHLVLR 371
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ +I + V ++I VK I+ G +Q+L F G + + + DY + +
Sbjct: 79 TLTSKIISLEVERINTIEDVKENIKVREGVPPDQQRLFFAGN-ILKDERTLSDYNILKES 137
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
+L VLRL I V T+ GK VE + VK +I K D Q LI G
Sbjct: 138 ILQHVLRLEGDMKIFVKTLTGKTITLEVEPADTIENVKAKIQDKEGFLPD--QQRLIFAG 195
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
+ELED R ++ + E+ +HL++R
Sbjct: 196 KELEDDRTLSYYNVQKESTLHLVLR 220
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 70/147 (47%), Gaps = 4/147 (2%)
Query: 33 SILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRD 91
S+ IF+ ++ G I + V +D+I +VK +I G + +Q L F G+EL + + D
Sbjct: 375 SMNIFVKTLTGKTITLEVEPADTIDNVKAKIHDKEGVPLDQQSLFFAGKELENERT-LSD 433
Query: 92 YGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKN 151
Y + L L LR+ I V T+ K+ V + +K +I+ D
Sbjct: 434 YNIQKKYTLDLFLRIEGGMRINVKTLTRKIITLEVNPANTINNIKAKISDMDCILPD--Q 491
Query: 152 QELICDGEELEDQRLITDICKRNEAVI 178
L +G++L+++R ++ +E+ +
Sbjct: 492 HVLTFNGQQLDNERSLSSYNIESESTL 518
>gi|27734379|gb|AAM51218.1| polyubiquitin [Cercomonas sp. ATCC 50316]
Length = 177
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 78/145 (53%), Gaps = 7/145 (4%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + SD+I +VK +IQ G +Q+L+F G++L + + DY + + LH
Sbjct: 3 GKTITLDAESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLH 61
Query: 102 LVLRL---SDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LVLRL S +Q I V T+ GK VE + VKQ+I K E + Q LI G
Sbjct: 62 LVLRLRGGSGMQ-IFVKTLTGKTITLDVESSDTIETVKQKIQDK--EGIPPDQQRLIFAG 118
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 119 KQLEDGRTLADYNIQKESTLHLVLR 143
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 74 IFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 132
Query: 95 ADGNVLHLVLRL---SDLQAITVTTVCGKVFEFHVERGRNVGYVKQ 137
+ LHLVLRL S +Q I V T+ GK VE + VKQ
Sbjct: 133 QKESTLHLVLRLRGGSGMQ-IFVKTLTGKTITLDVESSDTIETVKQ 177
>gi|27734341|gb|AAM51199.1| polyubiquitin [Lotharella amoeboformis]
Length = 175
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 76/143 (53%), Gaps = 4/143 (2%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + + LH
Sbjct: 3 GKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLH 61
Query: 102 LVLRL-SDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEE 160
LVLRL I V T+ GK V+ + VKQ+I K E + Q LI G++
Sbjct: 62 LVLRLRGGAMQIFVKTLTGKTITLDVDSSDTINTVKQKIQDK--EGIPPDQQRLIFAGKQ 119
Query: 161 LEDQRLITDICKRNEAVIHLLVR 183
LED R + D + E+ +HL++R
Sbjct: 120 LEDGRTLADYNIQKESTLHLVLR 142
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Query: 24 HRPEKLSNDSILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGREL 82
H +L ++ IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L
Sbjct: 61 HLVLRLRGGAMQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQL 120
Query: 83 ARSNSRVRDYGLADGNVLHLVLRL-SDLQAITVTTVCGKVFEFHVERGRNVGYVKQ 137
+ + DY + + LHLVLRL I V T+ GK V+ + VKQ
Sbjct: 121 EDGRT-LADYNIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQ 175
>gi|27734377|gb|AAM51217.1| polyubiquitin [Cercomonas sp. ATCC 50316]
Length = 177
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 78/145 (53%), Gaps = 7/145 (4%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + V SD I +VK +IQ G +Q+L+F G++L + + DY + + LH
Sbjct: 3 GKTITLDVESSDMIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLH 61
Query: 102 LVLRL---SDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LVLRL S +Q I V T+ GK VE + VKQ+I K E + Q LI G
Sbjct: 62 LVLRLRGGSGMQ-IFVKTLTGKTITLDVESSDTIETVKQKIQDK--EGIPPDQQRLIFAG 118
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 119 KQLEDGRTLADYNIQKESTLHLVLR 143
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 74 IFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 132
Query: 95 ADGNVLHLVLRL---SDLQAITVTTVCGKVFEFHVERGRNVGYVKQ 137
+ LHLVLRL S +Q I V T+ GK VE + VKQ
Sbjct: 133 QKESTLHLVLRLRGGSGMQ-IFVKTLTGKTITLDVESSDTIETVKQ 177
>gi|24640094|ref|NP_572306.1| CG11700 [Drosophila melanogaster]
gi|7290696|gb|AAF46143.1| CG11700 [Drosophila melanogaster]
Length = 301
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 4/145 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK RI G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDSIENVKARIHDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + +VK +I K + + +Q L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIKHVKARIHDK--DGIPPDHQRL 271
Query: 155 ICDGEELEDQRLITDICKRNEAVIH 179
I G++LED R ++D + E+ +H
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLH 296
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ + Q+L+F G+ L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ ++LVLRL I V T+ GK VE + VK +I K E ++Q L
Sbjct: 62 QKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EENPPEHQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G+ LE+ R ++D + E+ I+L++R
Sbjct: 120 IFGGKHLENGRTLSDYNIQKESTIYLVLR 148
>gi|27734306|gb|AAM50044.1| polyubiquitin 7 [Cercomonas sp. ATCC 50316]
Length = 177
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 77/144 (53%), Gaps = 5/144 (3%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + V SD+I +VK +I+ G +Q+L+F G++L + + DY + + LH
Sbjct: 3 GKTITLDVESSDTIETVKQKIRDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLH 61
Query: 102 LVLRLSDLQA--ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGE 159
LVLRL A I V T+ GK VE + VKQ+I K E + Q LI G+
Sbjct: 62 LVLRLRGGSAMQIFVKTLTGKTITLDVESSDTIETVKQKIQDK--EGIPPDQQRLIFAGK 119
Query: 160 ELEDQRLITDICKRNEAVIHLLVR 183
+LED R + D + E+ +HL++R
Sbjct: 120 QLEDGRTLADYNIQKESTLHLVLR 143
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 74 IFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 132
Query: 95 ADGNVLHLVLRL---SDLQAITVTTVCGKVFEFHVERGRNVGYVKQ 137
+ LHLVLRL S +Q I V T+ GK VE + VKQ
Sbjct: 133 QKESTLHLVLRLRGGSGMQ-IFVKTLTGKTITLDVESSDTIETVKQ 177
>gi|297735960|emb|CBI23934.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 73/139 (52%), Gaps = 3/139 (2%)
Query: 45 IPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVL 104
IP SD+I +VK +IQ G +Q+L+F G++L + + DY + + LHLVL
Sbjct: 36 IPPDQQSSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLHLVL 94
Query: 105 RLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQ 164
RL I V T+ GK VE + VK +I K E + Q LI G++LED
Sbjct: 95 RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDG 152
Query: 165 RLITDICKRNEAVIHLLVR 183
R + D + E+ +HL++R
Sbjct: 153 RTLADYNIQKESTLHLVLR 171
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 102 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 160
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVF 122
+ LHLVLRL I V T+ GK
Sbjct: 161 QKESTLHLVLRLRGGMQIFVKTLTGKTI 188
>gi|240254322|ref|NP_176714.4| ubiquitin 13 [Arabidopsis thaliana]
gi|332196241|gb|AEE34362.1| ubiquitin 13 [Arabidopsis thaliana]
Length = 319
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 4/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 7 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 65
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 66 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 123
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D ++ E+ +HL++R
Sbjct: 124 KQLEDGRTLADNIQK-ESTLHLVLR 147
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 17/159 (10%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ +Q+L+F G++L + + DY + +
Sbjct: 158 TLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 216
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 217 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQDK--EGIPPDQQRLIFAG 274
Query: 159 EELEDQR--------------LITDICKRNEAVIHLLVR 183
++LE + D + E+ +HL++R
Sbjct: 275 KQLEGGPGGGGGHFQKAEALAFLADYNIQKESTLHLVLR 313
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 13/81 (16%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGREL-------------ARS 85
++ G I + V S +I +VK +IQ G +Q+L+F G++L A +
Sbjct: 234 TLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGGPGGGGGHFQKAEA 293
Query: 86 NSRVRDYGLADGNVLHLVLRL 106
+ + DY + + LHLVLRL
Sbjct: 294 LAFLADYNIQKESTLHLVLRL 314
>gi|7439572|pir||T02358 ubiquitin homolog T8F5.13 - Arabidopsis thaliana
gi|3335355|gb|AAC27157.1| Match to polyubiquitin DNA gb|L05401 from A. thaliana. Contains
insertion of mitochondrial NADH dehydrogenase gb|X82618
and gb|X98301. May be a pseudogene with an expressed
insert. EST gb|AA586248 comes from this region
[Arabidopsis thaliana]
Length = 324
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D ++ E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADNIQK-ESTLHLVLR 147
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ +Q+L+F G++L + + DY +
Sbjct: 154 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRT-LADYNI 212
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 213 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQDK--EGIPPDQQRL 270
Query: 155 ICDGEELE 162
I G++LE
Sbjct: 271 IFAGKQLE 278
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 19/90 (21%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGREL------------ 82
IF+ ++ G I + V S +I +VK +IQ G +Q+L+F G++L
Sbjct: 230 IFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGGPGGGGGSRA 289
Query: 83 ------ARSNSRVRDYGLADGNVLHLVLRL 106
A + + + DY + + LHLVLRL
Sbjct: 290 SRHFQKAEALAFLADYNIQKESTLHLVLRL 319
>gi|290980934|ref|XP_002673186.1| polyubiquitin [Naegleria gruberi]
gi|284086768|gb|EFC40442.1| polyubiquitin [Naegleria gruberi]
Length = 152
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 35 LIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
L ++ G I + V +DSI +VK ++Q G +Q+L+F G++L + + DY +
Sbjct: 3 LFVKTLTGITITLEVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQLEDGRT-INDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL + V T+ GK +E V +KQ+I K E + Q L
Sbjct: 62 QKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDK--EGIPSDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R I D + ++ +HL++R
Sbjct: 120 IYAGKQLEDGRTIGDYNLQKDSTVHLVLR 148
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 35 LIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
L ++ G I + + +D++ ++K +I G +Q+L++ G++L + + DY L
Sbjct: 79 LFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQRLIYAGKQLEDGRT-IGDYNL 137
Query: 95 ADGNVLHLVLRL 106
+ +HLVLRL
Sbjct: 138 QKDSTVHLVLRL 149
>gi|182407850|gb|ACB87916.1| polyubiquitin 1 [Malus x domestica]
Length = 208
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ G+ VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGESITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRSLADYNIQKESTLHLVLR 148
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L S + DY +
Sbjct: 79 IFVKTLTGESITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRS-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V ++ GK VE + V+ +I K E + Q L
Sbjct: 138 QKESTLHLVLRLRGGMHIFVKSLTGKTITLEVESSETIDNVQAKIQDK--EGIPPDQQRL 195
Query: 155 ICDG 158
I G
Sbjct: 196 IFAG 199
>gi|28436474|gb|AAO43304.1| putative polyubiquitin [Arabidopsis thaliana]
Length = 325
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 23 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 81
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 82 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 139
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D ++ E+ +HL++R
Sbjct: 140 IFAGKQLEDGRTLADNIQK-ESTLHLVLR 167
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ +Q+L+F G++L + + DY +
Sbjct: 174 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRT-LADYNI 232
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 233 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQDK--EGIPPDQQRL 290
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 291 IFAGKQLEDGRTLADYNIQKESTLHLVLR 319
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 91 DYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLK 150
DY + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 2 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPD 59
Query: 151 NQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R + D + E+ +HL++R
Sbjct: 60 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 92
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V S +I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 250 IFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 308
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 309 QKESTLHLVLRL 320
>gi|340709503|ref|XP_003393346.1| PREDICTED: polyubiquitin-B-like isoform 1 [Bombus terrestris]
gi|340709505|ref|XP_003393347.1| PREDICTED: polyubiquitin-B-like isoform 2 [Bombus terrestris]
Length = 157
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ HLVLRL I+V T+ GK V+ + VK +I +K E + Q L
Sbjct: 62 QKESTSHLVLRLRGGMQISVKTLTGKAITLEVDVPDTIENVKAKIHEK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V D+I +VK +I G +Q+L+F G++L + + DY + +
Sbjct: 83 TLTGKAITLEVDVPDTIENVKAKIHEKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 141
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 142 TLHLVLRL 149
>gi|28436472|gb|AAO43303.1| putative polyubiquitin [Arabidopsis thaliana]
Length = 325
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 23 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 81
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 82 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 139
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D ++ E+ +HL++R
Sbjct: 140 IFAGKQLEDGRTLADNIQK-ESTLHLVLR 167
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ +Q+L+F G++L + + DY +
Sbjct: 174 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRT-LADYNI 232
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V + GK VE + VK +I K E + Q L
Sbjct: 233 QKESTLHLVLRLRGGMQIFVKNLTGKTITLEVESSGTIDNVKAKIQDK--EGIPPDQQRL 290
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 291 IFAGKQLEDGRTLADYNIQKESTLHLVLR 319
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 91 DYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLK 150
DY + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 2 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPD 59
Query: 151 NQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R + D + E+ +HL++R
Sbjct: 60 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 92
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + V S +I +VK +IQ G +Q+L+F G++L + + DY + + LH
Sbjct: 257 GKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLH 315
Query: 102 LVLRL 106
LVLRL
Sbjct: 316 LVLRL 320
>gi|290971454|ref|XP_002668516.1| polyubiquitin [Naegleria gruberi]
gi|290992572|ref|XP_002678908.1| polyubiquitin [Naegleria gruberi]
gi|284081958|gb|EFC35772.1| polyubiquitin [Naegleria gruberi]
gi|284092522|gb|EFC46164.1| polyubiquitin [Naegleria gruberi]
Length = 152
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 81/149 (54%), Gaps = 3/149 (2%)
Query: 35 LIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
L ++ G I + V +DSI +VK ++Q G ++Q+L++ G++L + + DY +
Sbjct: 3 LFVKTLTGKTITLEVESNDSIENVKRKVQDKEGIPPEQQRLIYAGKQLEDGRT-INDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL + V T+ GK +E + +KQ+I K E + Q L
Sbjct: 62 QKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTIQNMKQKIFDK--EGIPSDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + ++ +HL++R
Sbjct: 120 IYAGKQLEDGRQLSDYNLQKDSTVHLVLR 148
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 35 LIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
L ++ G I + + +D+I ++K +I G +Q+L++ G++L ++ DY L
Sbjct: 79 LFVKTLTGKTITIEMESNDTIQNMKQKIFDKEGIPSDQQRLIYAGKQLE-DGRQLSDYNL 137
Query: 95 ADGNVLHLVLRL 106
+ +HLVLRL
Sbjct: 138 QKDSTVHLVLRL 149
>gi|118370598|ref|XP_001018500.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|89300267|gb|EAR98255.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
Length = 547
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 12/207 (5%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G + + + D++ +VK +IQ G +Q+L+F G++L + V+DY + +
Sbjct: 159 TLTGKTVTLDLEPFDTVENVKAKIQDKEGIPPDQQRLIFAGKQLDDGRT-VQDYNIQKES 217
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK E + +K +I K E + Q LI G
Sbjct: 218 TLHLVLRLRGGMQIFVKTLTGKTVTLDFEASDTIENIKAKIQDK--EGIPPDQQRLIFAG 275
Query: 159 EELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVSIEATELNEKGA 211
++L+D R ++D + E+ +HL++R ++ K V DFE S + K
Sbjct: 276 KQLDDSRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDFEASDTIENIKAKIQ 335
Query: 212 DVVG--EHQFETLFMGYQIRERKLLQN 236
D G Q +F G Q+ + + +Q+
Sbjct: 336 DKEGIPPDQQRLIFAGKQLDDGRTVQD 362
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 12/207 (5%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G + + SD+I ++K +IQ G +Q+L+F G++L + ++DY + +
Sbjct: 83 TLTGKTVTLDFEASDTIENIKAKIQDKEGIPPDQQRLIFAGKQLDDGRT-LQDYNIQKES 141
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK +E V VK +I K E + Q LI G
Sbjct: 142 TLHLVLRLRGGMQIFVKTLTGKTVTLDLEPFDTVENVKAKIQDK--EGIPPDQQRLIFAG 199
Query: 159 EELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVSIEATELNEKGA 211
++L+D R + D + E+ +HL++R ++ K V DFE S + K
Sbjct: 200 KQLDDGRTVQDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDFEASDTIENIKAKIQ 259
Query: 212 DVVG--EHQFETLFMGYQIRERKLLQN 236
D G Q +F G Q+ + + L +
Sbjct: 260 DKEGIPPDQQRLIFAGKQLDDSRTLSD 286
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G + + SD+I ++K +IQ G +Q+L+F G++L + V+DY + +
Sbjct: 311 TLTGKTVTLDFEASDTIENIKAKIQDKEGIPPDQQRLIFAGKQLDDGRT-VQDYNIQKES 369
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK +E V VK +I K E + Q LI G
Sbjct: 370 TLHLVLRLRGGMQIFVKTLTGKTVTLDLEPCDTVENVKAKIQDK--EGIPPDQQRLIFAG 427
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++L+D R I+D + E+ +HL++R
Sbjct: 428 KQLDDSRTISDYNIQKESTLHLVLR 452
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 83/157 (52%), Gaps = 4/157 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G + + + D++ +VK +IQ G +Q+L+F G++L S + + DY + +
Sbjct: 387 TLTGKTVTLDLEPCDTVENVKAKIQDKEGIPPDQQRLIFAGKQLDDSRT-ISDYNIQKES 445
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK +E + VK +I K E + Q LI G
Sbjct: 446 TLHLVLRLRGGLQIFVKTLTGKTITLDLEASDTIENVKSKIQDK--EGIPPDQQRLIFSG 503
Query: 159 EELEDQRLITDICKRNEAVIHLLVR-KSAKVRAKPVQ 194
+ LED R ++D + E+ +HL++R + +R K +Q
Sbjct: 504 KCLEDFRTLSDYNIQKESTLHLVLRLRGGNIRNKYIQ 540
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + SD+I VK +IQ G +Q+L+F G++L S + + DY + +
Sbjct: 7 TLTGKTITLDFEVSDTIEDVKAKIQDKEGIPPDQQRLIFAGKQLDDSRT-LSDYNIQKES 65
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK E + +K +I K E + Q LI G
Sbjct: 66 TLHLVLRLRGGMQIFVKTLTGKTVTLDFEASDTIENIKAKIQDK--EGIPPDQQRLIFAG 123
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++L+D R + D + E+ +HL++R
Sbjct: 124 KQLDDGRTLQDYNIQKESTLHLVLR 148
>gi|340375318|ref|XP_003386183.1| PREDICTED: polyubiquitin-like [Amphimedon queenslandica]
Length = 968
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 77/143 (53%), Gaps = 3/143 (2%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G + + V SD++ SVK +IQ G +Q+L+F G++L + + DY + + + LH
Sbjct: 10 GESLSLEVEASDTVESVKEKIQDKEGIPPDQQRLIFVGKQLENGRT-LSDYNIQNESTLH 68
Query: 102 LVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEEL 161
LVLRL I V T+ GK VE + +K +I K E + Q LI G +L
Sbjct: 69 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTMENIKAKIQDK--EGIPPDQQRLIFAGRQL 126
Query: 162 EDQRLITDICKRNEAVIHLLVRK 184
ED R ++D + E+ +HL++R+
Sbjct: 127 EDGRTLSDYNIQKESTLHLVLRR 149
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD++ ++K +IQ G +Q+L+F GR+L + + DY + +
Sbjct: 83 TLTGKTITLEVEPSDTMENIKAKIQDKEGIPPDQQRLIFAGRQLEDGRT-LSDYNIQKES 141
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLR I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 142 TLHLVLRRRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAG 199
Query: 159 EELEDQRLITDICKRNEAVIHLLV 182
+ LED R ++D + E+ +HL++
Sbjct: 200 KILEDGRTLSDYNIQKESTLHLVL 223
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 34 ILIFLSVG-----GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSR 88
+LIF+ + G +I ++V S++I +VK +IQ +QKL+F G++L +
Sbjct: 229 MLIFVKIWIGNETGKIIFLQVEPSNTIENVKAKIQDKERIPPDQQKLIFAGKQLENGHYT 288
Query: 89 VRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVF-EFHVERGRNVGYVKQQIAKKGREFV 147
+ DYG+ + L L+ L D I + V G V + + RN+GY+K I K + +
Sbjct: 289 LLDYGIQRESTLDLL--LPDHMIINIKEVDGNVVTDVIINSYRNIGYIKADI--KSKTNI 344
Query: 148 DLKNQELICDGEELEDQRLITDICKRNEAVIHLLVRKSA 186
Q L G++L R + ++ +HL+ R+
Sbjct: 345 PYDEQRLTFAGKQLSFGRTFSHYKIKDGDTLHLVPRRPG 383
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 81/161 (50%), Gaps = 13/161 (8%)
Query: 31 NDSILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSN--- 86
N ++ I++ ++ G + V+ ++I +VK +I+ G +QK++++GR+L
Sbjct: 538 NPNMTIYVKTLTGKTFELNVIYCNTIGNVKTKIEETGGIPCNQQKIIYDGRQLEDDYIED 597
Query: 87 ----SRVR---DYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQI 139
++++ D+G+ D + LHL+LRL I V T+ G+ VE + VK +I
Sbjct: 598 TLLPNKIKTLFDHGIKDKSTLHLLLRLRGGMQIFVKTLTGRTITLEVEPSDTIENVKAKI 657
Query: 140 AKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHL 180
K E + Q LI G+ L D R ++D + + I L
Sbjct: 658 QDK--EGIPPDQQRLIFAGKVLVDDRTLSDYNIKTKDTIDL 696
>gi|195164961|ref|XP_002023314.1| GL20619 [Drosophila persimilis]
gi|194105419|gb|EDW27462.1| GL20619 [Drosophila persimilis]
Length = 231
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 84/151 (55%), Gaps = 7/151 (4%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK--GREFVDLKNQ 152
+ LHLVLRL I V T+ ++ H RGR +G+ ++ K +E + Q
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLD---WQDHHPRGRALGHHRESFKAKIQDKEGIPPDQQ 118
Query: 153 ELICDGEELEDQRLITDICKRNEAVIHLLVR 183
LI G++LED R ++D + E+ +HL++R
Sbjct: 119 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 149
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 3/127 (2%)
Query: 57 SVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTT 116
S K +IQ G +Q+L+F G++L + + DY + + LHLVLRL I V T
Sbjct: 102 SFKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQIFVKT 160
Query: 117 VCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEA 176
+ GK VE + VK +I K E + Q LI G++LED R ++D + E+
Sbjct: 161 LTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 218
Query: 177 VIHLLVR 183
+HL++R
Sbjct: 219 TLHLVLR 225
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 156 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 214
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 215 QKESTLHLVLRL 226
>gi|290997001|ref|XP_002681070.1| polyubiquitin [Naegleria gruberi]
gi|284094693|gb|EFC48326.1| polyubiquitin [Naegleria gruberi]
Length = 153
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 80/149 (53%), Gaps = 3/149 (2%)
Query: 35 LIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
L ++ G I + V +DSI +VK ++Q G ++Q+L++ G++L + + DY +
Sbjct: 3 LFVKTLTGKTITLEVESNDSIENVKRKVQDKEGIPPEQQRLIYAGKQLEDGRT-INDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL + V T+ G +E V +KQ+I K E + Q L
Sbjct: 62 QKDSTLHLVLRLRGGMQLFVKTLTGNTITIEMESNDTVENMKQKIFDK--EGIPSDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R I+D + ++ +HL++R
Sbjct: 120 IYAGKQLEDGRTISDYNLQKDSTVHLVLR 148
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 35 LIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
L ++ G+ I + + +D++ ++K +I G +Q+L++ G++L + + DY L
Sbjct: 79 LFVKTLTGNTITIEMESNDTVENMKQKIFDKEGIPSDQQRLIYAGKQLEDGRT-ISDYNL 137
Query: 95 ADGNVLHLVLRL 106
+ +HLVLRL
Sbjct: 138 QKDSTVHLVLRL 149
>gi|379771652|gb|AFD18177.1| ubiquitin C, partial [Mylabris cichorii]
Length = 204
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
Query: 49 VMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSD 108
V SD+I +VK +IQ G +Q+L+F G++L + + DY + + LHLVLRL
Sbjct: 1 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRG 59
Query: 109 LQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLIT 168
I V T+ GK VE + VK +I K E + Q LI G++LED R ++
Sbjct: 60 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLS 117
Query: 169 DICKRNEAVIHLLVR 183
D + E+ +HL++R
Sbjct: 118 DYNIQKESTLHLVLR 132
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 63 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 121
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK 142
+ LHLVLRL I V T+ GK VE + V+ +I K
Sbjct: 122 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVEAKIQDK 169
>gi|357474747|ref|XP_003607659.1| Ubiquitin [Medicago truncatula]
gi|355508714|gb|AES89856.1| Ubiquitin [Medicago truncatula]
Length = 259
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRV-RDYGLADG 97
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + R+ DY +
Sbjct: 35 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL--EDGRILADYNIQKE 92
Query: 98 NVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICD 157
+ LHLVLRL I V T+ GK VE + VK +I K E + Q LI
Sbjct: 93 STLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFA 150
Query: 158 GEELEDQRLITDICKRNEAVIHLLVR 183
G++LED R + D + E+ +HL++R
Sbjct: 151 GKQLEDGRTLGDYNIQKESTLHLVLR 176
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 74/145 (51%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 111 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LGDYNIQKES 169
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK + +K + L ++ G
Sbjct: 170 TLHLVLRLRGGMQIFVNTLTGKTITLDVESSDTIADVKLTLEEKVG--IPLDQVRVVIAG 227
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++L+D + + E+ +H++++
Sbjct: 228 KQLKDSYTLAHYNIQKESTLHMVLQ 252
>gi|302655191|ref|XP_003019389.1| hypothetical protein TRV_06592 [Trichophyton verrucosum HKI 0517]
gi|291183107|gb|EFE38744.1| hypothetical protein TRV_06592 [Trichophyton verrucosum HKI 0517]
Length = 438
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 79/151 (52%), Gaps = 9/151 (5%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 11 TLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 69
Query: 99 VLHLVLRL------SDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQ 152
LHLVLRL + + V T+ GK VE + VK +I K E + Q
Sbjct: 70 TLHLVLRLRGETTTNTISQPVVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQ 127
Query: 153 ELICDGEELEDQRLITDICKRNEAVIHLLVR 183
LI G++LED R ++D + E+ +HL++R
Sbjct: 128 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 158
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 3/129 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 93 TLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 151
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 152 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAG 209
Query: 159 EELEDQRLI 167
++LED R +
Sbjct: 210 KQLEDGRTL 218
>gi|27734329|gb|AAM51193.1| polyubiquitin [Haynesina germanica]
Length = 175
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 78/143 (54%), Gaps = 4/143 (2%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + V +D+I +VK +IQ G ++Q+L+F G++L + + DY + + LH
Sbjct: 3 GKTITLDVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQLEDGRT-LSDYNIQKESTLH 61
Query: 102 LVLRL-SDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEE 160
LVLRL I V T+ GK VE + VK +I K E + + Q LI G++
Sbjct: 62 LVLRLRGGAMQIFVKTLTGKTITLDVEPNDTIQNVKAKIQDK--EGIPPEQQRLIFAGKQ 119
Query: 161 LEDQRLITDICKRNEAVIHLLVR 183
LED R ++D + E+ +HL++R
Sbjct: 120 LEDGRTLSDYNIQKESTLHLVLR 142
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Query: 28 KLSNDSILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSN 86
+L ++ IF+ ++ G I + V +D+I +VK +IQ G ++Q+L+F G++L
Sbjct: 65 RLRGGAMQIFVKTLTGKTITLDVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQLEDGR 124
Query: 87 SRVRDYGLADGNVLHLVLRL-SDLQAITVTTVCGKVFEFHVERGRNVGYVK 136
+ + DY + + LHLVLRL I V T+ GK VE + VK
Sbjct: 125 T-LSDYNIQKESTLHLVLRLRGGAMQIFVKTLTGKTITLDVEPNDTIQNVK 174
>gi|18405196|ref|NP_564675.1| polyubiquitin 12 [Arabidopsis thaliana]
gi|122213849|sp|Q3E7K8.1|UBQ12_ARATH RecName: Full=Polyubiquitin 12; Contains: RecName:
Full=Ubiquitin-related 1; Contains: RecName:
Full=Ubiquitin-related 2; Contains: RecName:
Full=Ubiquitin-related 3; Flags: Precursor
gi|332195060|gb|AEE33181.1| polyubiquitin 12 [Arabidopsis thaliana]
Length = 230
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I ++K +IQ G +Q+L+F G++L + + DY + +
Sbjct: 83 TLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 141
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 142 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGISPDQQRLIFAG 199
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++ ED R + D + E+ +HL++R
Sbjct: 200 KQHEDGRTLADYNIQKESTLHLVLR 224
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IFL ++ G + V SD+I +VK +IQ G + +L+F G++L + + DY +
Sbjct: 3 IFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRT-LADYNV 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ + LHL+LR I V T+ GK VE + +K +I K E + Q L
Sbjct: 62 QEDSTLHLLLRFRGGMQIFVKTLTGKTITLEVESSDTIDNLKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++ + DY + +
Sbjct: 159 TLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQ-HEDGRTLADYNIQKES 217
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 218 TLHLVLRL 225
>gi|290984552|ref|XP_002674991.1| polyubiquitin [Naegleria gruberi]
gi|284088584|gb|EFC42247.1| polyubiquitin [Naegleria gruberi]
Length = 153
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 35 LIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
L ++ G I + V +DSI +VK ++Q G ++Q+L++ G++L + DY +
Sbjct: 3 LFVKTLTGKTITLEVESNDSIENVKRKVQDKEGVPPEQQRLIYAGKQLEDGRT-FNDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL + V T+ GK E + +KQ+I K E + Q L
Sbjct: 62 QKDSTLHLVLRLRGGMQLFVKTLTGKTITIETESNDTIENMKQKIFDK--EGIPSDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R I+D + ++ +HL++R
Sbjct: 120 IYAGKQLEDGRTISDYNLQKDSTVHLVLR 148
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 35 LIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
L ++ G I + +D+I ++K +I G +Q+L++ G++L + + DY L
Sbjct: 79 LFVKTLTGKTITIETESNDTIENMKQKIFDKEGIPSDQQRLIYAGKQLEDGRT-ISDYNL 137
Query: 95 ADGNVLHLVLRL 106
+ +HLVLRL
Sbjct: 138 QKDSTVHLVLRL 149
>gi|397527146|ref|XP_003833462.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-like [Pan paniscus]
Length = 153
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G +I + V S +I +VK +IQ G +QKL+F G++L S + DY +
Sbjct: 3 IFVKTLTGKIITLEVEPSATIENVKAKIQDKEGNPHDQQKLIFAGKQLEDGCS-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I + E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI--QDEEGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKKLEDGRTLSDYSIQKESTLHLVLR 148
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDEEGIPPDQQRLIFAGKKLEDGRT-LSDYSI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKESTLHLVLRL 149
>gi|339232958|ref|XP_003381596.1| ubiquitin family protein [Trichinella spiralis]
gi|316979574|gb|EFV62350.1| ubiquitin family protein [Trichinella spiralis]
Length = 152
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 48 RVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLS 107
+ + SD+I +VK +IQ G +Q+L+F G++L + + DY + + LHLVLRL
Sbjct: 10 KWIPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLR 68
Query: 108 DLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLI 167
I V T+ GK VE V VK +I K E + Q LI G++LED R +
Sbjct: 69 GGMQIFVKTLTGKTITLEVEPSDTVENVKGKIQDK--EGIPPDQQRLIFAGKQLEDSRTL 126
Query: 168 TDICKRNEAVIHLLVR 183
+D + E+ +HL++R
Sbjct: 127 SDYNIQKESTLHLVLR 142
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD++ +VK +IQ G +Q+L+F G++L S + + DY +
Sbjct: 73 IFVKTLTGKTITLEVEPSDTVENVKGKIQDKEGIPPDQQRLIFAGKQLEDSRT-LSDYNI 131
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 132 QKESTLHLVLRL 143
>gi|283245864|gb|ABH10622.2| ubiquitin [Nicotiana tabacum]
Length = 143
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 4/145 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 2 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 60
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 61 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 118
Query: 155 ICDGEELEDQRLITDICKRNEAVIH 179
I G++LED R + D + E+ +H
Sbjct: 119 IFAGKQLEDGRTLADYNIQKESTLH 143
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R + D
Sbjct: 2 IFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYN 59
Query: 172 KRNEAVIHLLVR 183
+ E+ +HL++R
Sbjct: 60 IQKESTLHLVLR 71
>gi|40647160|gb|AAR88386.1| polyubiquitin 1, partial [Plasmodiophora brassicae]
gi|40647162|gb|AAR88387.1| polyubiquitin 2, partial [Plasmodiophora brassicae]
Length = 175
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 75/143 (52%), Gaps = 4/143 (2%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + V D+I +VK +IQ G +Q+L+F G++L + + DY + + LH
Sbjct: 3 GKTITLDVDSGDTIETVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLH 61
Query: 102 LVLRL-SDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEE 160
LVLRL I V T+ GK V+ G + VK +I K E + Q LI G++
Sbjct: 62 LVLRLRGGTMQIFVKTLTGKTITLDVDSGDTIETVKAKIQDK--EGIPPDQQRLIFAGKQ 119
Query: 161 LEDQRLITDICKRNEAVIHLLVR 183
LED R + D + E+ +HL++R
Sbjct: 120 LEDGRTLADYNIQKESTLHLVLR 142
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Query: 24 HRPEKLSNDSILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGREL 82
H +L ++ IF+ ++ G I + V D+I +VK +IQ G +Q+L+F G++L
Sbjct: 61 HLVLRLRGGTMQIFVKTLTGKTITLDVDSGDTIETVKAKIQDKEGIPPDQQRLIFAGKQL 120
Query: 83 ARSNSRVRDYGLADGNVLHLVLRL-SDLQAITVTTVCGKVFEFHVERGRNVGYVK 136
+ + DY + + LHLVLRL I V T+ GK V+ G + VK
Sbjct: 121 EDGRT-LADYNIQKESTLHLVLRLRGGTMQIFVKTLTGKTITLDVDSGDTIETVK 174
>gi|118370604|ref|XP_001018503.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|89300270|gb|EAR98258.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
Length = 384
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 103/207 (49%), Gaps = 12/207 (5%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G + + + D+I +VK +IQ G +Q+L+F G++L S + + DY ++ +
Sbjct: 83 TLTGKTVTLDLEPCDTIENVKAKIQDKEGIPPDQQRLIFAGKQLDDSKT-ISDYNISKES 141
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK +E + VK +I K E + Q LI G
Sbjct: 142 TLHLVLRLRGGMQIFVKTLTGKTITLDLEVSDTIENVKSKIQDK--EGIPPDQQRLIFAG 199
Query: 159 EELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEV--SIEATELNEK 209
++L+D ++++D + E+ +HL++R ++ K V D E +IE + +
Sbjct: 200 KQLDDGKILSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDLESCDTIENVKAKIQ 259
Query: 210 GADVVGEHQFETLFMGYQIRERKLLQN 236
+ + Q +F G Q+ + K + +
Sbjct: 260 DKEGIPPDQQRLIFAGKQLDDSKTISD 286
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G + + + D+I +VK +IQ G +Q+L+F G++L S + + DY ++ +
Sbjct: 235 TLTGKTVTLDLESCDTIENVKAKIQDKEGIPPDQQRLIFAGKQLDDSKT-ISDYNISKES 293
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK +E + VK +I K E + Q LI G
Sbjct: 294 TLHLVLRLRGGMQIFVKTLTGKTITLDLEASDTIENVKSKIQDK--EGIPPDQQRLIFSG 351
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
+ LED R ++D + E +HL++R
Sbjct: 352 KCLEDTRTLSDYNIQKEQTLHLVLR 376
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 93/194 (47%), Gaps = 12/194 (6%)
Query: 52 SDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQA 111
SD+I +K +IQ G +Q+L+F G++L + + DY + + LHLVLRL
Sbjct: 20 SDTIEGIKAKIQDKEGIPPDQQRLIFAGKQLDDGKT-LSDYNIQKESTLHLVLRLRGGMQ 78
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK +E + VK +I K E + Q LI G++L+D + I+D
Sbjct: 79 IFVKTLTGKTVTLDLEPCDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLDDSKTISDYN 136
Query: 172 KRNEAVIHLLVRKSAKVR-------AKPVQKDFEVSIEATELNEKGADVVG--EHQFETL 222
E+ +HL++R ++ K + D EVS + K D G Q +
Sbjct: 137 ISKESTLHLVLRLRGGMQIFVKTLTGKTITLDLEVSDTIENVKSKIQDKEGIPPDQQRLI 196
Query: 223 FMGYQIRERKLLQN 236
F G Q+ + K+L +
Sbjct: 197 FAGKQLDDGKILSD 210
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + + SD+I +VK +IQ G +Q+L+F G+ L + + + DY +
Sbjct: 311 TLTGKTITLDLEASDTIENVKSKIQDKEGIPPDQQRLIFSGKCLEDTRT-LSDYNIQKEQ 369
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 370 TLHLVLRL 377
>gi|3789940|gb|AAC67551.1| tetra-ubiquitin [Saccharum hybrid cultivar H32-8560]
Length = 305
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 3/142 (2%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + V SD+ +VK +IQ G +Q+L+F G++L + + DY + + LH
Sbjct: 162 GKTITLEVESSDTXDNVKXKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLH 220
Query: 102 LVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEEL 161
LVLR I V T+ GK VE + VK +I K E + Q LI G++L
Sbjct: 221 LVLRXRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQL 278
Query: 162 EDQRLITDICKRNEAVIHLLVR 183
ED R + D + E+ +HL++R
Sbjct: 279 EDGRTLADYNIQKESTLHLVLR 300
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 76/149 (51%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ HLVLR I V T GK VE VK +I K E + Q L
Sbjct: 138 QXESXXHLVLRXRGGMQIFVKTXTGKTITLEVESSDTXDNVKXKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD I V +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDXIDXVXAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LXDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ HLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTXHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R + D + E+ HL++R
Sbjct: 120 IFAGKQLEDGRTLADYNIQXESXXHLVLR 148
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 289
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 290 QKESTLHLVLRL 301
>gi|403284846|ref|XP_003933763.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like isoform 3
[Saimiri boliviensis boliviensis]
Length = 153
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 4/151 (2%)
Query: 34 ILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDY 92
+LIFL ++ I + V SD+I +VK +IQ G +Q+L+F ++L + + DY
Sbjct: 1 MLIFLKTLTSKTITLEVEPSDTIKNVKAKIQDKEGIPPDQQRLIFARKQLEDGRN-LSDY 59
Query: 93 GLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQ 152
+ + LHL+LRL I V T+ K VE + VK +I K E + Q
Sbjct: 60 NIQKESTLHLILRLRGGMQIFVKTLTSKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQ 117
Query: 153 ELICDGEELEDQRLITDICKRNEAVIHLLVR 183
LI G++LED R ++D + E+++HL++R
Sbjct: 118 RLIFAGKQLEDGRTLSDYNIQKESILHLVLR 148
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 83 TLTSKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 141
Query: 99 VLHLVLRL 106
+LHLVLRL
Sbjct: 142 ILHLVLRL 149
>gi|385881402|gb|AFI98422.1| polyubiquitin-B, partial [Antricola delacruzi]
Length = 156
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 72/132 (54%), Gaps = 3/132 (2%)
Query: 52 SDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQA 111
SD+I +VK +IQ G +Q+L+F G++L + + DY + + LHLVLRL
Sbjct: 23 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQ 81
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R ++D
Sbjct: 82 IFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYN 139
Query: 172 KRNEAVIHLLVR 183
+ E+ +HL++R
Sbjct: 140 IQKESTLHLVLR 151
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 82 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 140
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 141 QKESTLHLVLRL 152
>gi|310693627|gb|ADP05114.1| polyubiquitin 10 [Aponogeton madagascariensis]
Length = 221
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
Query: 49 VMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSD 108
V SD+I +VK +IQ G +Q+L+F G++L + + DY + + LHLVLRL
Sbjct: 87 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLHLVLRLRG 145
Query: 109 LQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLIT 168
I V T+ GK VE + VK +I K E + Q LI G++LED R +
Sbjct: 146 GMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLA 203
Query: 169 DICKRNEAVIHLLVR 183
D + E+ +HL++R
Sbjct: 204 DYNIQKESTLHLVLR 218
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 1 ALTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 59
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ G+ VE + VK +I K E + Q LI G
Sbjct: 60 TLHLVLRLRGGMQIFVKTLTGETTTLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAG 117
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 118 KQLEDGRTLADYNIQKESTLHLVLR 142
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 149 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 207
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 208 QKESTLHLVLRL 219
>gi|115467930|ref|NP_001057564.1| Os06g0340600 [Oryza sativa Japonica Group]
gi|113595604|dbj|BAF19478.1| Os06g0340600, partial [Oryza sativa Japonica Group]
Length = 172
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 47/59 (79%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHLD 323
G RGLTP+DIG I+CR+T+ +S IE IV+EA+ VLPG+SE FLE+V+ I+DRHLD
Sbjct: 110 GAARGLTPYDIGRILCRETVNRDSEIEDIVQEAEGHVLPGSSEVIFLETVSEIIDRHLD 168
>gi|297606344|ref|NP_001058338.2| Os06g0673500 [Oryza sativa Japonica Group]
gi|52077254|dbj|BAD46297.1| pentameric polyubiquitin-like [Oryza sativa Japonica Group]
gi|52077458|dbj|BAD46688.1| pentameric polyubiquitin-like [Oryza sativa Japonica Group]
gi|255677314|dbj|BAF20252.2| Os06g0673500 [Oryza sativa Japonica Group]
Length = 187
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 7 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 65
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI
Sbjct: 66 TLHLVLRLRGGMQIFVKTLTGKTITLAVESSDKIDNVKAKIQDK--EGIPPDQQRLIFAD 123
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R + D + E+ +HL++R
Sbjct: 124 KQLEDGRTLADYNIQKESTLHLVLR 148
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD I +VK +IQ G +Q+L+F ++L + + DY + +
Sbjct: 83 TLTGKTITLAVESSDKIDNVKAKIQDKEGIPPDQQRLIFADKQLEDGRT-LADYNIQKES 141
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 142 TLHLVLRL 149
>gi|26353460|dbj|BAC40360.1| unnamed protein product [Mus musculus]
Length = 153
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+++F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRVIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ L LVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLDLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLR+
Sbjct: 138 QKESTLHLVLRV 149
>gi|60598636|gb|AAX25867.1| unknown [Schistosoma japonicum]
Length = 183
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G+ I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGNTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T GK VE + VK +I K E + L
Sbjct: 62 QKESTLHLVLRLRGGMHIFVKTSTGKTITLEVEPSDTIENVKAKIQDK--EGIPPVQHRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++ ED R +D + E+ +HL++R
Sbjct: 120 ISAGKQSEDGRTSSDYTIQKESTLHLVLR 148
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 36 IFLSVG-GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGR--ELARSNSRVRDY 92
IF+ G I + V SD+I +VK +IQ G + +L+ G+ E R++S DY
Sbjct: 79 IFVKTSTGKTITLEVEPSDTIENVKAKIQDKEGIPPVQHRLISAGKQSEDGRTSS---DY 135
Query: 93 GLADGNVLHLVLRLSDLQAITVTTVCGKV 121
+ + LHLVLRL I V T+ GK
Sbjct: 136 TIQKESTLHLVLRLRGGMQIFVNTLTGKT 164
>gi|60417384|emb|CAI59819.1| ubiquitin [Nyctotherus ovalis]
Length = 208
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 73/141 (51%), Gaps = 3/141 (2%)
Query: 43 SVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHL 102
I + V +D+I VK +IQ G +Q+L+F G++L + + DY + + LHL
Sbjct: 1 KTITLDVEPNDTIEQVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLHL 59
Query: 103 VLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELE 162
VLRL I V T+ GK VE + VK +I K E + Q LI G++LE
Sbjct: 60 VLRLRGGMQIFVKTLTGKTITLDVEPNDTIEQVKAKIQDK--EGIPPDQQRLIFAGKQLE 117
Query: 163 DQRLITDICKRNEAVIHLLVR 183
D R + D + E+ +HL++R
Sbjct: 118 DGRTLADYNIQKESTLHLVLR 138
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D+I VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 69 IFVKTLTGKTITLDVEPNDTIEQVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 127
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 128 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPNDTIEQVKAKIQDK--EGIPPDQQRL 185
Query: 155 ICDGEELEDQRLITDICKRNEAV 177
I G++LED R + D + E+
Sbjct: 186 IFAGKQLEDGRTLADYNIQKEST 208
>gi|18421671|ref|NP_568552.1| polyubiquitin 9 [Arabidopsis thaliana]
gi|75170661|sp|Q9FHQ6.1|UBQ9_ARATH RecName: Full=Polyubiquitin 9; Contains: RecName:
Full=Ubiquitin-related 1; Contains: RecName:
Full=Ubiquitin-related 2; Contains: RecName:
Full=Ubiquitin-related 3; Contains: RecName:
Full=Ubiquitin-related 4; Flags: Precursor
gi|9757974|dbj|BAB08310.1| polyubiquitin [Arabidopsis thaliana]
gi|332006830|gb|AED94213.1| polyubiquitin 9 [Arabidopsis thaliana]
Length = 322
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Query: 44 VIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLV 103
I + V+ SD+I +VK +IQ G + +Q+L+F G+ L + + DY + ++LHL
Sbjct: 14 TITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRT-LADYSIQKDSILHLA 72
Query: 104 LRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELED 163
LRL I V T+ GK VE + VK +I K E V Q LI G++L+D
Sbjct: 73 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGVPPDQQRLIFAGKQLDD 130
Query: 164 QRLITDICKRNEAVIHLLVR 183
R + D + E+ +HL++R
Sbjct: 131 GRTLADYNIQKESTLHLVLR 150
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 92/191 (48%), Gaps = 20/191 (10%)
Query: 10 PVLEESLNFPGNFTHRPEKLSN-----DSIL-----------IFL-SVGGSVIPMRVMES 52
P+ ++ L F G L++ DSIL IF+ ++ G I + V S
Sbjct: 39 PLDQQRLIFSGKLLDDGRTLADYSIQKDSILHLALRLRGGMQIFVKTLTGKTITLEVESS 98
Query: 53 DSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAI 112
D+I +VK +IQ G +Q+L+F G++L + + DY + + LHLVLRL I
Sbjct: 99 DTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRT-LADYNIQKESTLHLVLRLRGGMQI 157
Query: 113 TVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICK 172
V T+ K VE VK +I K E + Q LI G++LED R + D
Sbjct: 158 FVRTLTRKTIALEVESSDTTDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNI 215
Query: 173 RNEAVIHLLVR 183
+ E+ +HL++R
Sbjct: 216 QKESTLHLVLR 226
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 72/141 (51%), Gaps = 4/141 (2%)
Query: 44 VIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLV 103
I + V SD+ +VK +IQ G +Q+L+F G++L + + DY + + LHLV
Sbjct: 166 TIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLHLV 224
Query: 104 LRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELED 163
LRL I V T+ GK VE + VK +I K R + Q LI GE+LED
Sbjct: 225 LRLCGGMQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKER--IQPDQQRLIFAGEQLED 282
Query: 164 -QRLITDICKRNEAVIHLLVR 183
+ D + E+ +HL++R
Sbjct: 283 GYYTLADYNIQKESTLHLVLR 303
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ +Q+L+F G +L + DY + +
Sbjct: 237 TLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADYNIQKES 296
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 297 TLHLVLRL 304
>gi|40647164|gb|AAR88388.1| polyubiquitin 3, partial [Plasmodiophora brassicae]
Length = 175
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 75/143 (52%), Gaps = 4/143 (2%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + V D+I +VK +IQ G +Q+L+F G++L + + DY + + LH
Sbjct: 3 GKTITLDVDSGDTIETVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLH 61
Query: 102 LVLRL-SDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEE 160
LVLRL I V T+ GK V+ G + VK +I K E + Q LI G++
Sbjct: 62 LVLRLRGGTMQIFVKTLTGKTITLDVDSGDAIETVKAKIQDK--EGIPPDQQRLIFAGKQ 119
Query: 161 LEDQRLITDICKRNEAVIHLLVR 183
LED R + D + E+ +HL++R
Sbjct: 120 LEDGRTLADYNIQKESTLHLVLR 142
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Query: 24 HRPEKLSNDSILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGREL 82
H +L ++ IF+ ++ G I + V D+I +VK +IQ G +Q+L+F G++L
Sbjct: 61 HLVLRLRGGTMQIFVKTLTGKTITLDVDSGDAIETVKAKIQDKEGIPPDQQRLIFAGKQL 120
Query: 83 ARSNSRVRDYGLADGNVLHLVLRL-SDLQAITVTTVCGKVFEFHVERGRNVGYVK 136
+ + DY + + LHLVLRL I V T+ GK V+ G + VK
Sbjct: 121 EDGRT-LADYNIQKESTLHLVLRLRGGTMQIFVKTLTGKTITLDVDSGDTIETVK 174
>gi|302393788|sp|P23398.2|UBIQP_STRPU RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|161616|gb|AAA30082.1| ubiquitin, partial [Strongylocentrotus purpuratus]
Length = 133
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 72/131 (54%), Gaps = 3/131 (2%)
Query: 53 DSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAI 112
DSI +VK +IQ G +Q+L+F G++L + + DY + + LHLVLRL I
Sbjct: 1 DSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQI 59
Query: 113 TVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICK 172
V T+ GK VE ++ VK +I K E + Q LI G++LED R ++D
Sbjct: 60 FVKTLTGKTITLEVEPSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNI 117
Query: 173 RNEAVIHLLVR 183
+ E+ +HL++R
Sbjct: 118 QKESTLHLVLR 128
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 59 IFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 117
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 118 QKESTLHLVLRL 129
>gi|18398638|ref|NP_566357.1| polyubiquitin 8 [Arabidopsis thaliana]
gi|75101960|sp|Q39256.1|UBQ8_ARATH RecName: Full=Polyubiquitin 8; Contains: RecName:
Full=Ubiquitin-related 1; Contains: RecName:
Full=Ubiquitin-related 2; Contains: RecName:
Full=Ubiquitin-related 3; Contains: RecName:
Full=Ubiquitin-related 4; Contains: RecName:
Full=Ubiquitin-related 5; Contains: RecName:
Full=Ubiquitin-related 6; Contains: RecName:
Full=Ubiquitin-related 7; Contains: RecName:
Full=Ubiquitin-related 8; Flags: Precursor
gi|6681339|gb|AAF23256.1|AC015985_14 polyubiquitin (ubq8) [Arabidopsis thaliana]
gi|6682255|gb|AAF23307.1|AC016661_32 polyubiquitin [Arabidopsis thaliana]
gi|870794|gb|AAA68879.1| polyubiquitin [Arabidopsis thaliana]
gi|332641292|gb|AEE74813.1| polyubiquitin 8 [Arabidopsis thaliana]
Length = 631
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 77/140 (55%), Gaps = 3/140 (2%)
Query: 44 VIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLV 103
I + V SDSI +VK +IQ+ G + +Q+L+F G++L + + DY + + LHLV
Sbjct: 14 TITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLT-LADYNIQKESTLHLV 72
Query: 104 LRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELED 163
LRL I V T+ GK V+ + VK +I K E + + Q LI G++LED
Sbjct: 73 LRLRGGMQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDK--EGILPRQQRLIFAGKQLED 130
Query: 164 QRLITDICKRNEAVIHLLVR 183
R + D + E+ +HL++R
Sbjct: 131 GRTLADYNIQKESTLHLVLR 150
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 79/152 (51%), Gaps = 10/152 (6%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G ++Q+L+F G++L + + DY + +
Sbjct: 85 TLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRT-LADYNIQKES 143
Query: 99 VLHLVLRLSDLQAITVTTVCGKVF-----EFHVERGRNVGYVKQQIAKKGREFVDLKNQE 153
LHLVLRL I V+T GK F VE + VK +I + RE + +Q
Sbjct: 144 TLHLVLRLCGGMQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKI--QDREGLRPDHQR 201
Query: 154 LICDGEEL--EDQRLITDICKRNEAVIHLLVR 183
LI GEEL ED R + D RN + + L +R
Sbjct: 202 LIFHGEELFTEDNRTLADYGIRNRSTLCLALR 233
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 44 VIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH-L 102
I + V SD+I +VK++IQ G + +Q+L+F GR L S + + DY + G+ +H L
Sbjct: 487 TITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGSRTLL-DYNIQKGSTIHQL 545
Query: 103 VLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELE 162
L+ +Q I + T+ GK VE + VK++I K E + Q LI G++LE
Sbjct: 546 FLQRGGMQ-IFIKTLTGKTIILEVESSDTIANVKEKIQVK--EGIKPDQQMLIFFGQQLE 602
Query: 163 DQRLITDICKRNEAVIHLLVR 183
D + D ++ ++L++R
Sbjct: 603 DGVTLGDYDIHKKSTLYLVLR 623
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 8/146 (5%)
Query: 44 VIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSR-VRDYGLADGNVLHL 102
+ ++V SD+I +VK +IQ G Q+L+F G EL ++R + DYG+ + + L L
Sbjct: 171 TLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDNRTLADYGIRNRSTLCL 230
Query: 103 VLRLSDLQAITV-----TTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICD 157
LRL I V + G+ F VE + VK ++ K R +DL LI
Sbjct: 231 ALRLRGDMYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDL--HRLIFA 288
Query: 158 GEELEDQRLITDICKRNEAVIHLLVR 183
G+ LE R + + + ++L+ R
Sbjct: 289 GKPLEGGRTLAHYNIQKGSTLYLVTR 314
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 69/155 (44%), Gaps = 13/155 (8%)
Query: 36 IFLSV-GGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ + GG +I + V+ SD+I SVK +IQ G +Q L+F G +L + + DY +
Sbjct: 395 IFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRT-LGDYNI 453
Query: 95 ADGNVLHLVLRLSDLQAITVTT--------VCGKVFEFHVERGRNVGYVKQQIAKKGREF 146
+ + LHL + I V T C K VE + VK +I K
Sbjct: 454 RNESTLHLFFHIRHGMQIFVKTFSFSGETPTC-KTITLEVESSDTIDNVKVKIQHK--VG 510
Query: 147 VDLKNQELICDGEELEDQRLITDICKRNEAVIHLL 181
+ L Q LI G L R + D + + IH L
Sbjct: 511 IPLDRQRLIFGGRVLVGSRTLLDYNIQKGSTIHQL 545
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 1/148 (0%)
Query: 35 LIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
L + S G + V SD+I +VK ++Q + +L+F G+ L + + Y +
Sbjct: 245 LPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRT-LAHYNI 303
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
G+ L+LV R I V T+ K VE + VK + K Q L
Sbjct: 304 QKGSTLYLVTRFRCGMQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRL 363
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G+EL+D + D + E+ +HL++
Sbjct: 364 IFLGKELKDGCTLADYSIQKESTLHLVL 391
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 29 LSNDSILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
L + IF+ ++ G I + V SD+IA+VK +IQ G +Q L+F G++L
Sbjct: 547 LQRGGMQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQL-EDGV 605
Query: 88 RVRDYGLADGNVLHLVLRL 106
+ DY + + L+LVLRL
Sbjct: 606 TLGDYDIHKKSTLYLVLRL 624
>gi|408776165|gb|AFU90137.1| polyubiquitin, partial [Paeonia lactiflora]
Length = 169
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 71/132 (53%), Gaps = 3/132 (2%)
Query: 52 SDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQA 111
SD+I +VK +IQ G +Q+L+F G++L + + DY + + LHLVLRL
Sbjct: 1 SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLHLVLRLRGGMQ 59
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R + D
Sbjct: 60 IFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYN 117
Query: 172 KRNEAVIHLLVR 183
+ E+ +HL++R
Sbjct: 118 IQKESTLHLVLR 129
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 60 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 118
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK 142
+ LHLVLRL I V T+ GK VE + VK +I K
Sbjct: 119 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK 166
>gi|449483218|ref|XP_004156525.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Cucumis
sativus]
Length = 208
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 81/153 (52%), Gaps = 8/153 (5%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLS----DLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLK 150
+ LHLVLRL + I V T+ GK VE + VK +I K E +
Sbjct: 62 QKESTLHLVLRLRGGIIEPMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPD 119
Query: 151 NQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED R + D + E+ +HL++R
Sbjct: 120 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 152
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 83 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 141
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 142 QKESTLHLVLRL 153
>gi|33327286|gb|AAQ08999.1| polyubiquitin 2 [Phaseolus vulgaris]
Length = 134
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 71/132 (53%), Gaps = 3/132 (2%)
Query: 52 SDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQA 111
SD+I +VK +IQ G +Q+L+F G++L + + DY + + LHLVLRL
Sbjct: 1 SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLHLVLRLRGGMQ 59
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R + D
Sbjct: 60 IFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYN 117
Query: 172 KRNEAVIHLLVR 183
+ E+ +HL++R
Sbjct: 118 IQKESTLHLVLR 129
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 60 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 118
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 119 QKESTLHLVLRL 130
>gi|290979754|ref|XP_002672598.1| polyubiquitin [Naegleria gruberi]
gi|284086176|gb|EFC39854.1| polyubiquitin [Naegleria gruberi]
Length = 154
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 81/150 (54%), Gaps = 5/150 (3%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRL-SDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQE 153
+ LHLVLRL I V T+ GK VE + VK +I K E + Q
Sbjct: 62 QKESTLHLVLRLRGGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDK--EGIPPDQQR 119
Query: 154 LICDGEELEDQRLITDICKRNEAVIHLLVR 183
LI G++LED R ++D + E+ +HL++R
Sbjct: 120 LIFAGKQLEDGRTLSDYNIQKESTLHLVLR 149
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 28 KLSNDSILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSN 86
+L + IF+ ++ G I + V +D+I +VK +IQ G +Q+L+F G++L
Sbjct: 72 RLRGGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 131
Query: 87 SRVRDYGLADGNVLHLVLRL 106
+ + DY + + LHLVLRL
Sbjct: 132 T-LSDYNIQKESTLHLVLRL 150
>gi|123390686|ref|XP_001299928.1| polyubiquitin [Trichomonas vaginalis G3]
gi|121880877|gb|EAX86998.1| polyubiquitin, putative [Trichomonas vaginalis G3]
Length = 186
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V +D I VK +IQ G +Q+L+F G++L N+ ++DY + +
Sbjct: 40 TLTGKHITLEVEPTDRIEDVKTKIQDKEGIPPDQQRLIFAGKQLEDGNT-LQDYSIQKDS 98
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 99 TLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDK--EGIPPDQQRLIFAG 156
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED + D + ++ +HL++R
Sbjct: 157 KQLEDGNTLQDYSIQKDSTLHLVLR 181
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D I VK +IQ G +Q+L+F G++L N+ ++DY +
Sbjct: 112 IFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNT-LQDYSI 170
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 171 QKDSTLHLVLRL 182
>gi|429327043|gb|AFZ78850.1| polyubiquitin [Coptotermes formosanus]
Length = 230
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D I VK +IQ G +Q+L+F G++L N+ ++DY +
Sbjct: 3 IFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNT-LQDYSI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED + D + ++ +HL++R
Sbjct: 120 IFAGKQLEDGNTLQDYSIQKDSTLHLVLR 148
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D I VK +IQ G +Q+L+F G++L N+ ++DY +
Sbjct: 79 IFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNT-LQDYSI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED + D + ++ +HL++R
Sbjct: 196 IFAGKQLEDGNTLQDYSIQKDSTLHLVLR 224
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D I VK +IQ G +Q+L+F G++L N+ ++DY +
Sbjct: 155 IFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNT-LQDYSI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKDSTLHLVLRL 225
>gi|10719701|gb|AAG22093.1| ubiquitin [Scyliorhinus torazame]
Length = 173
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 27 IFVKTLTGKTITXEVEPSDTIENVKAKIQXKEGIPPDQQRLIFAGKQLXDGRT-LSDYNI 85
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 86 QKESTLHLVLRLRGGMQIFVKTLTGKTITXEVEPSDTIENVKAKIQXK--EGIPPDQQRL 143
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LE+ R ++D + + +HL++R
Sbjct: 144 IFAGKQLEEXRTLSDYNIQKXSTLHLVLR 172
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 12/156 (7%)
Query: 91 DYGLADGNVLHLVLR-LSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDL 149
DY + + LHLVLR L I V T+ GK VE + VK +I K E +
Sbjct: 5 DYNIQKXSTLHLVLRGLRGGMQIFVKTLTGKTITXEVEPSDTIENVKAKIQXK--EGIPP 62
Query: 150 KNQELICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS-- 200
Q LI G++L D R ++D + E+ +HL++R ++ K + + E S
Sbjct: 63 DQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITXEVEPSDT 122
Query: 201 IEATELNEKGADVVGEHQFETLFMGYQIRERKLLQN 236
IE + + + + Q +F G Q+ E + L +
Sbjct: 123 IENVKAKIQXKEGIPPDQQRLIFAGKQLEEXRTLSD 158
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 103 IFVKTLTGKTITXEVEPSDTIENVKAKIQXKEGIPPDQQRLIFAGKQLEEXRT-LSDYNI 161
Query: 95 ADGNVLHLVLRL 106
+ LHLVLR+
Sbjct: 162 QKXSTLHLVLRV 173
>gi|323716602|gb|ADY05179.1| ubiquitin [Acipenser persicus]
Length = 132
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 71/134 (52%), Gaps = 3/134 (2%)
Query: 47 MRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRL 106
+ V SD+I +VK +IQ G +Q+L+F G++L + + DY + + LHLVLRL
Sbjct: 2 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRL 60
Query: 107 SDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRL 166
I V T+ GK VE + VK +I K E + Q LI G++LED R
Sbjct: 61 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRT 118
Query: 167 ITDICKRNEAVIHL 180
++D + E+ +HL
Sbjct: 119 LSDYNIQKESTMHL 132
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 66 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 124
Query: 95 ADGNVLHL 102
+ +HL
Sbjct: 125 QKESTMHL 132
>gi|145524134|ref|XP_001447897.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415425|emb|CAK80500.1| unnamed protein product [Paramecium tetraurelia]
Length = 358
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 74/137 (54%), Gaps = 3/137 (2%)
Query: 47 MRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRL 106
+ V SD+I +VK +IQ G +Q+L+F G++L + + DY + + LHLVLRL
Sbjct: 136 LDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRL 194
Query: 107 SDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRL 166
I V T+ GK VE + VK +I K E + Q LI G++LED R
Sbjct: 195 RGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRT 252
Query: 167 ITDICKRNEAVIHLLVR 183
++D + E+ +HL++R
Sbjct: 253 LSDYNIQKESTLHLVLR 269
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 61 RIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGK 120
+IQ G +Q+L+F G++L + + DY + + LHLVLRL I V T+ GK
Sbjct: 2 KIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 60
Query: 121 VFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHL 180
VE + VK +I K E + Q LI G++LED R ++D + E+ +HL
Sbjct: 61 TITLDVEPSDTIDAVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 118
Query: 181 LVR 183
++R
Sbjct: 119 VLR 121
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 16/207 (7%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 56 TLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 114
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL +T VE + VK +I K E + Q LI G
Sbjct: 115 TLHLVLRLRGGILLTWKNHAA----LDVEPSDTIDAVKAKIQDK--EGIPPDQQRLIFAG 168
Query: 159 EELEDQRLITDICKRNEAVIHLLVRKSAKVR-------AKPVQKDFEVS--IEATELNEK 209
++LED R ++D + E+ +HL++R ++ K + D E S I+A + +
Sbjct: 169 KQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQ 228
Query: 210 GADVVGEHQFETLFMGYQIRERKLLQN 236
+ + Q +F G Q+ + + L +
Sbjct: 229 DKEGIPPDQQRLIFAGKQLEDGRTLSD 255
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 204 TLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 262
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNV 132
LHLVLRL I V+ + HV++ +
Sbjct: 263 TLHLVLRLRGGIMIFVSIFTSFILYIHVKQSDTI 296
>gi|1101011|gb|AAC46935.1| polyubiquitin, partial [Trichomonas vaginalis]
Length = 770
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D I VK +IQ G +Q+L+F G++L N+ ++DY +
Sbjct: 12 IFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNT-LQDYSI 70
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 71 QKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDK--EGIPPDQQRL 128
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED + D + ++ +HL++R
Sbjct: 129 IFAGKQLEDGNTLQDYSIQKDSTLHLVLR 157
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D I VK +IQ G +Q+L+F G++L N+ ++DY +
Sbjct: 164 IFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNT-LQDYSI 222
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 223 QKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDK--EGIPPDQQRL 280
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED + D + ++ +HL++R
Sbjct: 281 IFAGKQLEDGNTLQDYSIQKDSTLHLVLR 309
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D I VK +IQ G +Q+L+F G++L N+ ++DY +
Sbjct: 316 IFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNT-LQDYSI 374
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 375 QKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDK--EGIPPDQQRL 432
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED + D + ++ +HL++R
Sbjct: 433 IFAGKQLEDGNTLQDYSIQKDSTLHLVLR 461
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D I VK +IQ G +Q+L+F G++L N+ ++DY +
Sbjct: 468 IFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNT-LQDYSI 526
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 527 QKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDK--EGIPPDQQRL 584
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED + D + ++ +HL++R
Sbjct: 585 IFAGKQLEDGNTLQDYSIQKDSTLHLVLR 613
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D I VK +IQ G +Q+L+F G++L N+ ++DY +
Sbjct: 620 IFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNT-LQDYSI 678
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 679 QKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQVK--EGIPPDQQGL 736
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED + + D + ++ +HL++R
Sbjct: 737 IFAGKQLEDGKTLQDYSIQKDSTLHLVLR 765
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D I VK +IQ G +Q L+F G++L + ++DY +
Sbjct: 696 IFVKTLTGKHITLEVEPTDRIEDVKAKIQVKEGIPPDQQGLIFAGKQLEDGKT-LQDYSI 754
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 755 QKDSTLHLVLRL 766
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 101 HLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEE 160
HLVLRL I V T+ GK VE + VK +I K E + Q LI G++
Sbjct: 1 HLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDK--EGIPPDQQRLIFAGKQ 58
Query: 161 LEDQRLITDICKRNEAVIHLLVR 183
LED + D + ++ +HL++R
Sbjct: 59 LEDGNTLQDYSIQKDSTLHLVLR 81
>gi|123445177|ref|XP_001311351.1| polyubiquitin [Trichomonas vaginalis G3]
gi|121893157|gb|EAX98421.1| polyubiquitin, putative [Trichomonas vaginalis G3]
Length = 229
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D I VK +IQ G +Q+L+F G++L N+ ++DY +
Sbjct: 3 IFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNT-LQDYSI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED + D + ++ +HL++R
Sbjct: 120 IFAGKQLEDGNTLQDYSIQKDSTLHLVLR 148
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D I VK +IQ G +Q+L+F G++L N+ ++DY +
Sbjct: 79 IFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNT-LQDYSI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 138 QKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED + D + ++ +HL++R
Sbjct: 196 IFAGKQLEDGNTLQDYSIQKDSTLHLVLR 224
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D I VK +IQ G +Q+L+F G++L N+ ++DY +
Sbjct: 155 IFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNT-LQDYSI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKDSTLHLVLRL 225
>gi|123390682|ref|XP_001299927.1| polyubiquitin [Trichomonas vaginalis G3]
gi|121880876|gb|EAX86997.1| polyubiquitin [Trichomonas vaginalis G3]
Length = 153
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D I VK +IQ G +Q+L+F G++L N+ ++DY +
Sbjct: 3 IFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNT-LQDYSI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED + D + ++ +HL++R
Sbjct: 120 IFAGKQLEDGNTLQDYSIQKDSTLHLVLR 148
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D I VK +IQ G +Q+L+F G++L N+ ++DY +
Sbjct: 79 IFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNT-LQDYSI 137
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 138 QKDSTLHLVLRL 149
>gi|123471218|ref|XP_001318810.1| polyubiquitin [Trichomonas vaginalis G3]
gi|123479158|ref|XP_001322738.1| polyubiquitin [Trichomonas vaginalis G3]
gi|123501326|ref|XP_001328048.1| polyubiquitin [Trichomonas vaginalis G3]
gi|121901578|gb|EAY06587.1| polyubiquitin, putative [Trichomonas vaginalis G3]
gi|121905590|gb|EAY10515.1| polyubiquitin, putative [Trichomonas vaginalis G3]
gi|121910986|gb|EAY15825.1| polyubiquitin, putative [Trichomonas vaginalis G3]
Length = 153
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V +D I VK +IQ G +Q+L+F G++L N+ ++DY + +
Sbjct: 7 TLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNT-LQDYSIQKDS 65
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 66 TLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDK--EGIPPDQQRLIFAG 123
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED + D + ++ +HL++R
Sbjct: 124 KQLEDGNTLQDYSIQKDSTLHLVLR 148
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V +D I VK +IQ G +Q+L+F G++L N+ ++DY + +
Sbjct: 83 TLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNT-LQDYSIQKDS 141
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 142 TLHLVLRL 149
>gi|30983942|gb|AAP40646.1| putative polyubiquitin [Gossypium barbadense]
Length = 134
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 70/132 (53%), Gaps = 3/132 (2%)
Query: 52 SDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQA 111
+D+I +VK +IQ G +Q+L+F G++L + + DY + + LHLVLRL
Sbjct: 1 ADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLHLVLRLRGGMQ 59
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE VK +I K E + Q LI G+ELED R + D
Sbjct: 60 IFVKTLTGKTITLEVESSDTTDNVKAKIQDK--EGIPPDQQRLIFAGKELEDGRTLADYN 117
Query: 172 KRNEAVIHLLVR 183
+ E+ +HL++R
Sbjct: 118 IQKESTLHLVLR 129
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+ +VK +IQ G +Q+L+F G+EL + + DY +
Sbjct: 60 IFVKTLTGKTITLEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKELEDGRT-LADYNI 118
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 119 QKESTLHLVLRL 130
>gi|357116845|ref|XP_003560187.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-60S ribosomal protein
L40-like [Brachypodium distachyon]
Length = 213
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 81/154 (52%), Gaps = 14/154 (9%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD I +VK +IQ G ++Q+L+F G++L N R L
Sbjct: 3 IFVKTLTGKTITLEVESSDIIDNVKTKIQDKEGIPPEQQRLIFAGKQL--DNGRT----L 56
Query: 95 ADGNV-----LHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDL 149
AD N+ LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 57 ADCNIQKESTLHLVLRLQGRMXIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPP 114
Query: 150 KNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++L+D R + D + E+ +HL++R
Sbjct: 115 DQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLR 148
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 34 ILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDY 92
+ IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY
Sbjct: 77 MXIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRT-LADY 135
Query: 93 GLADGNVLHLVLRL 106
+ + LHLVLRL
Sbjct: 136 NIQKESTLHLVLRL 149
>gi|323453810|gb|EGB09681.1| polyubiquitin, partial [Aureococcus anophagefferens]
Length = 134
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 71/135 (52%), Gaps = 3/135 (2%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + + LH
Sbjct: 3 GKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLH 61
Query: 102 LVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEEL 161
LVLRL I V T+ GK VE + VKQ+I K E + Q LI G++L
Sbjct: 62 LVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDK--EGIPPDQQRLIFAGKQL 119
Query: 162 EDQRLITDICKRNEA 176
ED R ++D + E+
Sbjct: 120 EDGRTLSDYNIQKES 134
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 11/129 (8%)
Query: 117 VCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEA 176
+ GK VE + VKQ+I K E + Q LI G++LED R ++D + E+
Sbjct: 1 LTGKTITLDVEPSDTIDNVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 58
Query: 177 VIHLLVRKSAKVR-------AKPVQKDFEVSIEATELNEKGADVVG--EHQFETLFMGYQ 227
+HL++R ++ K + D E S + +K D G Q +F G Q
Sbjct: 59 TLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQ 118
Query: 228 IRERKLLQN 236
+ + + L +
Sbjct: 119 LEDGRTLSD 127
>gi|403284842|ref|XP_003933761.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like isoform 1
[Saimiri boliviensis boliviensis]
Length = 153
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IFL ++ I + V SD+I +VK +IQ G +Q+L+F ++L + + DY +
Sbjct: 3 IFLKTLTSKTITLEVEPSDTIKNVKAKIQDKEGIPPDQQRLIFARKQLEDGRN-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHL+LRL I V T+ K VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLILRLRGGMQIFVKTLTSKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+++HL++R
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESILHLVLR 148
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 83 TLTSKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 141
Query: 99 VLHLVLRL 106
+LHLVLRL
Sbjct: 142 ILHLVLRL 149
>gi|290995512|ref|XP_002680339.1| polyubiquitin [Naegleria gruberi]
gi|284093959|gb|EFC47595.1| polyubiquitin [Naegleria gruberi]
Length = 152
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 76/149 (51%), Gaps = 3/149 (2%)
Query: 35 LIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
L ++ G I + V +DSI +VK + G +Q+L+F G++L + + DY +
Sbjct: 3 LFVKTLTGRTITLEVESNDSIENVKRKAHDKEGILPDQQRLIFAGKQLEDGRT-INDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLV RL + V T+ GK +E V +KQ+I K E + Q L
Sbjct: 62 QKDSTLHLVWRLIGGMQLFVKTLTGKTITIEMESNATVENMKQKIFDK--EGIPSDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R I D + ++ +HL++R
Sbjct: 120 IYAGKQLEDGRTIGDYNLQKDSTVHLVLR 148
>gi|339232996|ref|XP_003381615.1| ubiquitin family protein [Trichinella spiralis]
gi|316979549|gb|EFV62331.1| ubiquitin family protein [Trichinella spiralis]
Length = 189
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 74/141 (52%), Gaps = 3/141 (2%)
Query: 49 VMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSD 108
V SDSI + K +IQ G +Q+L+F G++L + + DY + + LHLVLRL
Sbjct: 15 VHPSDSIENEKGKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRG 73
Query: 109 LQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLIT 168
I V T+ GK VE + VK +I K E + Q LI G++LED R ++
Sbjct: 74 GMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDK--EGIPPDQQRLIFAGKQLEDGRTLS 131
Query: 169 DICKRNEAVIHLLVRKSAKVR 189
D + E+ +HL++R +R
Sbjct: 132 DYNIQKESTLHLVLRLRGGMR 152
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 77 IFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 135
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 136 QKESTLHLVLRL 147
>gi|630479|pir||S43306 polyubiquitin 6 - Geodia cydonium
Length = 448
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 89/172 (51%), Gaps = 5/172 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVRAKPVQ-KDFEVSIEATE 205
I G++LED R ++D + E + + +R ++ K + K + +EA++
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKETLHLVRLRGGMQIFVKTLTGKTITLEVEASD 171
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 88/172 (51%), Gaps = 6/172 (3%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 227 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 285
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
LHLV+RL I V T+ GK VE + VK +I K E + Q L
Sbjct: 286 QK-ETLHLVVRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 342
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVRAKPVQ-KDFEVSIEATE 205
I G++LED R ++D + E + + +R ++ K + K + +EA++
Sbjct: 343 IFAGKQLEDGRTLSDYNIQKETLHLVRLRGGMQIFVKTLTGKTITLEVEASD 394
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 76/147 (51%), Gaps = 7/147 (4%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 302 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 360
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
LHLV RL I V T+ GK VE + VK +I K E + Q L
Sbjct: 361 QK-ETLHLV-RLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 416
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLL 181
I G++LED R ++D + E +HL+
Sbjct: 417 IFAGKQLEDGRTLSDYNIQKET-LHLV 442
>gi|145530712|ref|XP_001451128.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418772|emb|CAK83731.1| unnamed protein product [Paramecium tetraurelia]
Length = 169
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 9/145 (6%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 7 TLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 65
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + ++ I Q LI G
Sbjct: 66 TLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDATRKGIPP--------DQQRLIFAG 117
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED R ++D + E+ +HL++R
Sbjct: 118 KQLEDGRTLSDYNIQKESTLHLVLR 142
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I + + G +Q+L+F G++L + + DY + +
Sbjct: 83 TLTGKTITLDVEPSDTIDATR------KGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 135
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRN 131
LHLVLRL I V T+ GK VE R+
Sbjct: 136 TLHLVLRLRGGMQIFVKTLTGKTITLDVEHIRH 168
>gi|255965390|gb|ACU45000.1| unknown [Pfiesteria piscicida]
Length = 133
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 3/131 (2%)
Query: 53 DSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAI 112
D+I VK +IQ G +Q+L+F G++L + + DY + + LHLVLRL I
Sbjct: 1 DTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLHLVLRLRGGMQI 59
Query: 113 TVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICK 172
V T+ GK VE + VK +I K E + Q LI G++LED R + D
Sbjct: 60 FVKTLTGKTITLEVESSDTIDMVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNI 117
Query: 173 RNEAVIHLLVR 183
+ E+ +HL++R
Sbjct: 118 QKESTLHLVLR 128
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 59 IFVKTLTGKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 117
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 118 QKESTLHLVLRL 129
>gi|319996466|dbj|BAJ61942.1| ubiquitin [Nymphaea hybrid cultivar]
Length = 146
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 75/146 (51%), Gaps = 4/146 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHL 180
I G++LED R + D + E+ L
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTSTL 145
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R + D
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 172 KRNEAVIHLLVR 183
+ E+ +HL++R
Sbjct: 61 IQKESTLHLVLR 72
>gi|297823361|ref|XP_002879563.1| hypothetical protein ARALYDRAFT_482524 [Arabidopsis lyrata subsp.
lyrata]
gi|297325402|gb|EFH55822.1| hypothetical protein ARALYDRAFT_482524 [Arabidopsis lyrata subsp.
lyrata]
Length = 152
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK E +E + +K+++ +K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEK--EGIPPVQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G++L D + D +V+HL++
Sbjct: 120 IYAGKQLADDKTAKDYAIEGGSVLHLVL 147
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 28 KLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
+L +++ ++ G I + + +D+I +K R++ G +Q+L++ G++LA +
Sbjct: 72 RLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLA-DDK 130
Query: 88 RVRDYGLADGNVLHLVLRL 106
+DY + G+VLHLVL L
Sbjct: 131 TAKDYAIEGGSVLHLVLAL 149
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R + D
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 172 KRNEAVIHLL--VRKSAKVRAKPVQ-KDFEVSIEATE 205
+ E+ +HL+ +R ++ K + K+ E+ IE T+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTD 97
>gi|1805696|emb|CAA71664.1| polyubiquitin [Ceratitis capitata]
Length = 134
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 3/135 (2%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + + LH
Sbjct: 3 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLH 61
Query: 102 LVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEEL 161
LVLRL I V T+ GK VE + VK +I K E + Q LI G++L
Sbjct: 62 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQL 119
Query: 162 EDQRLITDICKRNEA 176
ED R ++D + E+
Sbjct: 120 EDGRTLSDYNIQKES 134
>gi|18403909|ref|NP_565812.1| NEDD8-like protein RUB2 [Arabidopsis thaliana]
gi|302393809|sp|Q8RUC6.3|RUB2_ARATH RecName: Full=Ubiquitin-NEDD8-like protein RUB2; Contains: RecName:
Full=Ubiquitin; Contains: RecName: Full=NEDD8-like
protein RUB2; AltName: Full=Ubiquitin-related protein 2;
Short=AtRUB2; Flags: Precursor
gi|18650605|gb|AAL75902.1| At1g31340/T19E23_4 [Arabidopsis thaliana]
gi|20147417|gb|AAM10418.1| At1g31340/T19E23_4 [Arabidopsis thaliana]
gi|20197530|gb|AAM15116.1| ubiquitin-like UBQ7/AtRUB2, putative [Arabidopsis thaliana]
gi|26452375|dbj|BAC43273.1| ubiquitin-like protein [Arabidopsis thaliana]
gi|330254040|gb|AEC09134.1| NEDD8-like protein RUB2 [Arabidopsis thaliana]
Length = 154
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK E +E + +K+++ +K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEK--EGIPPVQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G++L D + D +V+HL++
Sbjct: 120 IYAGKQLADDKTAKDYAIEGGSVLHLVL 147
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 28 KLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
+L +++ ++ G I + + +D+I +K R++ G +Q+L++ G++LA +
Sbjct: 72 RLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLA-DDK 130
Query: 88 RVRDYGLADGNVLHLVLRL 106
+DY + G+VLHLVL L
Sbjct: 131 TAKDYAIEGGSVLHLVLAL 149
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R + D
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 172 KRNEAVIHLL--VRKSAKVRAKPVQ-KDFEVSIEATE 205
+ E+ +HL+ +R ++ K + K+ E+ IE T+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTD 97
>gi|2641213|gb|AAB86858.1| polyubiquitin, partial [Schizophyllum commune]
Length = 139
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITD 169
I G++LED R ++D
Sbjct: 120 IFAGKQLEDGRTLSD 134
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R ++D
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 172 KRNEAVIHLLVR 183
+ E+ +HL++R
Sbjct: 61 IQKESTLHLVLR 72
>gi|297846540|ref|XP_002891151.1| hypothetical protein ARALYDRAFT_473638 [Arabidopsis lyrata subsp.
lyrata]
gi|297336993|gb|EFH67410.1| hypothetical protein ARALYDRAFT_473638 [Arabidopsis lyrata subsp.
lyrata]
Length = 156
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK E +E + +K+++ +K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEK--EGIPPVQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G++L D + D +V+HL++
Sbjct: 120 IYAGKQLADDKTAKDYAIEGGSVLHLVL 147
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 28 KLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
+L +++ ++ G I + + +D+I +K R++ G +Q+L++ G++LA +
Sbjct: 72 RLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLA-DDK 130
Query: 88 RVRDYGLADGNVLHLVLRL 106
+DY + G+VLHLVL L
Sbjct: 131 TAKDYAIEGGSVLHLVLAL 149
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R + D
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 172 KRNEAVIHLL--VRKSAKVRAKPVQ-KDFEVSIEATE 205
+ E+ +HL+ +R ++ K + K+ E+ IE T+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTD 97
>gi|1321735|emb|CAA64326.1| ubiquitin [Carabus alpestris]
Length = 139
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITD 169
I G++LED R ++D
Sbjct: 120 IFAGKQLEDGRTLSD 134
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R ++D
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 172 KRNEAVIHLLVR 183
+ E+ +HL++R
Sbjct: 61 IQKESTLHLVLR 72
>gi|361584485|gb|AEW12065.1| polyubiquitin, partial [Drosophila melanogaster]
gi|361584487|gb|AEW12066.1| polyubiquitin, partial [Drosophila melanogaster]
gi|361584489|gb|AEW12067.1| polyubiquitin, partial [Drosophila melanogaster]
gi|361584501|gb|AEW12073.1| polyubiquitin, partial [Drosophila melanogaster]
Length = 231
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ + Q+L+F G+ L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFAGKHLENGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ ++LVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 138 QKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKARIHDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ + Q+L+F G+ L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ ++LVLRL I V T+ GK VE + VK +I K E ++Q L
Sbjct: 62 QKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EENPPEHQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G+ LE+ R ++D + E+ I+L++R
Sbjct: 120 IFAGKHLENGRTLSDYNIQKESTIYLVLR 148
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK RI G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDSIENVKARIHDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|353230196|emb|CCD76367.1| putative ubiquitin (ribosomal protein L40) [Schistosoma mansoni]
Length = 247
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 70/132 (53%), Gaps = 3/132 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 7 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 65
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAG 123
Query: 159 EELEDQRLITDI 170
++LED R ++D+
Sbjct: 124 KQLEDGRTLSDL 135
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R ++D
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 172 KRNEAVIHLLVR 183
+ E+ +HL++R
Sbjct: 61 IQKESTLHLVLR 72
>gi|123454695|ref|XP_001315099.1| polyubiquitin [Trichomonas vaginalis G3]
gi|121897765|gb|EAY02876.1| polyubiquitin, putative [Trichomonas vaginalis G3]
Length = 153
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V +D I VK +IQ +Q+L+F G++L N+ ++DY + +
Sbjct: 7 TLTGKHITLEVEPTDRIEDVKAKIQDKEDIPPDQQRLIFAGKQLEDGNT-LQDYSIQKDS 65
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 66 TLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDK--EDIPPDQQRLIFAG 123
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
++LED + D + ++ +HL++R
Sbjct: 124 KQLEDGNTLQDYSIQKDSTLHLVLR 148
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V +D I VK +IQ +Q+L+F G++L N+ ++DY + +
Sbjct: 83 TLTGKHITLEVEPTDRIEDVKAKIQDKEDIPPDQQRLIFAGKQLEDGNT-LQDYSIQKDS 141
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 142 TLHLVLRL 149
>gi|361584495|gb|AEW12070.1| polyubiquitin, partial [Drosophila melanogaster]
Length = 231
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ + Q+L+F G+ L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ ++LVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 138 QKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKARIHDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ + Q+L+F G+ L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ ++LVLRL I V T+ GK VE + VK +I K E ++Q L
Sbjct: 62 QKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EENPPEHQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G+ LE+ R ++D + E+ I+L++R
Sbjct: 120 IFGGKHLENGRTLSDYNIQKESTIYLVLR 148
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK RI G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDSIENVKARIHDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|281210011|gb|EFA84179.1| ubiquitin [Polysphondylium pallidum PN500]
Length = 155
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 77/143 (53%), Gaps = 5/143 (3%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SDSI +VK++IQ G +Q+L+F G++L + + DY + +
Sbjct: 7 TLTGKTITLEVEGSDSIENVKIKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNILKES 65
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK-GREFVDLKNQELICD 157
LHLVLRL + V T+ GK+ VE + VK ++ +K G Q LIC+
Sbjct: 66 TLHLVLRLRGGMQVFVETLNGKIITLEVEESDTIENVKAKVTEKLGYPPT---QQNLICN 122
Query: 158 GEELEDQRLITDICKRNEAVIHL 180
++LE+ R + D + E+ I+L
Sbjct: 123 KKKLENGRTLFDYNIQKESKIYL 145
>gi|361584493|gb|AEW12069.1| polyubiquitin, partial [Drosophila melanogaster]
gi|361584497|gb|AEW12071.1| polyubiquitin, partial [Drosophila melanogaster]
Length = 231
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ + Q+L+F G+ L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ ++LVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 138 QKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKARIHDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ + Q+L+F G+ L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIKNVKAKIQDKEENPPEHQRLIFGGKHLENGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ ++LVLRL I V T+ GK VE + VK +I K E ++Q L
Sbjct: 62 QKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EENPPEHQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G+ LE+ R ++D + E+ I+L++R
Sbjct: 120 IFGGKHLENGRTLSDYNIQKESTIYLVLR 148
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK RI G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDSIENVKARIHDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|302393764|sp|P0C073.2|RUB1_DESAN RecName: Full=Ubiquitin-NEDD8-like protein RUB1; Contains: RecName:
Full=Ubiquitin; Contains: RecName: Full=NEDD8-like
protein RUB1; AltName: Full=DaRUB1; AltName:
Full=Ubiquitin-related protein 1; Flags: Precursor
gi|20562909|gb|AAM22748.1| polyubiquitin 2 [Deschampsia antarctica]
Length = 153
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK E +E + VK+++ +K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRVKERVEEK--EGIPPVQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G++L D + D +V+HL++
Sbjct: 120 IYAGKQLADDKTAKDYNIEGGSVLHLVL 147
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 28 KLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
+L +++ ++ G I + + +D+I VK R++ G +Q+L++ G++LA +
Sbjct: 72 RLRGGTMIKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLA-DDK 130
Query: 88 RVRDYGLADGNVLHLVLRL 106
+DY + G+VLHLVL L
Sbjct: 131 TAKDYNIEGGSVLHLVLAL 149
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R + D
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 172 KRNEAVIHLL--VRKSAKVRAKPVQ-KDFEVSIEATE 205
+ E+ +HL+ +R ++ K + K+ E+ IE T+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTD 97
>gi|361584491|gb|AEW12068.1| polyubiquitin, partial [Drosophila melanogaster]
Length = 231
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ + Q+L+F G+ L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ ++LVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 138 QKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKARIHDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ + Q+L+F G+ L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIKNVKAKIQDKEENPPEHQRLIFGGKHLENGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ ++LVLRL I V T+ GK VE + VK +I K E ++Q L
Sbjct: 62 QKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EENPPEHQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G+ LE+ R ++D + E+ I+L++R
Sbjct: 120 IFGGKHLENGRTLSDYNIQKESTIYLVLR 148
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK RI G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDSIENVKARIHDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|297606280|ref|NP_001058221.2| Os06g0650100 [Oryza sativa Japonica Group]
gi|255677281|dbj|BAF20135.2| Os06g0650100, partial [Oryza sativa Japonica Group]
Length = 177
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 27 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 85
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK E +E + +K+++ +K E + Q L
Sbjct: 86 QKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEK--EGIPPVQQRL 143
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G++L D + D +V+HL++
Sbjct: 144 IYAGKQLADDKTAKDYNIEGGSVLHLVL 171
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 28 KLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
+L +++ ++ G I + + +D+I +K R++ G +Q+L++ G++LA +
Sbjct: 96 RLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLA-DDK 154
Query: 88 RVRDYGLADGNVLHLVLRL 106
+DY + G+VLHLVL L
Sbjct: 155 TAKDYNIEGGSVLHLVLAL 173
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R + D
Sbjct: 27 IFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYN 84
Query: 172 KRNEAVIHLL--VRKSAKVRAKPVQ-KDFEVSIEATE 205
+ E+ +HL+ +R ++ K + K+ E+ IE T+
Sbjct: 85 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTD 121
>gi|348537407|ref|XP_003456186.1| PREDICTED: polyubiquitin-C-like [Oreochromis niloticus]
Length = 237
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 29/175 (16%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS------- 87
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 62
Query: 88 -------------------RVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVER 128
+ DY + + LHLVLRL + I V T+ GK VE
Sbjct: 63 KESTLHLVLFAGKQLEDGRTLSDYNIQKESTLHLVLRLRENMQIFVKTLTGKTITLEVEP 122
Query: 129 GRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
+ VK +I K E + Q LI G++LED R ++D + E+ +HL++R
Sbjct: 123 SDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 175
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 23/153 (15%)
Query: 32 DSILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVR 90
+++ IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + +
Sbjct: 102 ENMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LS 160
Query: 91 DYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLK 150
DY + + LHLVLRL I V T+ GK VE +
Sbjct: 161 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENXA-------------- 206
Query: 151 NQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
G++LED R ++D + E+ +HL++R
Sbjct: 207 -------GKQLEDGRTLSDYNIQKESTLHLVLR 232
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R ++D
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 172 KRNEAVIHLLVRKSAKVRAKPVQKDFEVSIEAT 204
+ E+ +HL++ ++ D+ + E+T
Sbjct: 61 IQKESTLHLVLFAGKQLEDGRTLSDYNIQKEST 93
>gi|242093754|ref|XP_002437367.1| hypothetical protein SORBIDRAFT_10g025670 [Sorghum bicolor]
gi|357123249|ref|XP_003563324.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2-like [Brachypodium
distachyon]
gi|302393766|sp|P0C031.2|RUB2_ORYSJ RecName: Full=Ubiquitin-NEDD8-like protein RUB2; Contains: RecName:
Full=Ubiquitin; Contains: RecName: Full=NEDD8-like
protein RUB2; AltName: Full=OsRUB2; AltName:
Full=Ubiquitin-related protein 2; Flags: Precursor
gi|51534981|dbj|BAD38105.1| polyubiquitin 2 [Oryza sativa Japonica Group]
gi|215692861|dbj|BAG88281.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218186299|gb|EEC68726.1| hypothetical protein OsI_37226 [Oryza sativa Indica Group]
gi|218198663|gb|EEC81090.1| hypothetical protein OsI_23921 [Oryza sativa Indica Group]
gi|241915590|gb|EER88734.1| hypothetical protein SORBIDRAFT_10g025670 [Sorghum bicolor]
Length = 153
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK E +E + +K+++ +K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEK--EGIPPVQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G++L D + D +V+HL++
Sbjct: 120 IYAGKQLADDKTAKDYNIEGGSVLHLVL 147
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 28 KLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
+L +++ ++ G I + + +D+I +K R++ G +Q+L++ G++LA +
Sbjct: 72 RLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLA-DDK 130
Query: 88 RVRDYGLADGNVLHLVLRL 106
+DY + G+VLHLVL L
Sbjct: 131 TAKDYNIEGGSVLHLVLAL 149
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R + D
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 172 KRNEAVIHLL--VRKSAKVRAKPVQ-KDFEVSIEATE 205
+ E+ +HL+ +R ++ K + K+ E+ IE T+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTD 97
>gi|62079638|gb|AAX61165.1| ubiquitin [Oreochromis mossambicus]
Length = 160
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 71/135 (52%), Gaps = 4/135 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EAFPPDQQRL 119
Query: 155 ICDGEELEDQRLITD 169
I G++LED R ++D
Sbjct: 120 IFAGKQLEDGRTLSD 134
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R ++D
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 172 KRNEAVIHLLVR 183
+ E+ +HL++R
Sbjct: 61 IQKESTLHLVLR 72
>gi|148905884|gb|ABR16104.1| unknown [Picea sitchensis]
gi|224286933|gb|ACN41169.1| unknown [Picea sitchensis]
Length = 153
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L S + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLDDGRS-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK E +E + +K+++ +K E + Q L
Sbjct: 62 QKESSLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIERIKERVEEK--EGIPPVQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G+++ D + D +V+HL++
Sbjct: 120 IYAGKQMNDDKTARDYNIEGGSVLHLVL 147
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 28 KLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
+L +++ ++ G I + + +D+I +K R++ G +Q+L++ G+++ +
Sbjct: 72 RLRGGTMIKVKTLTGKEIEIDIEPTDTIERIKERVEEKEGIPPVQQRLIYAGKQM-NDDK 130
Query: 88 RVRDYGLADGNVLHLVLRL 106
RDY + G+VLHLVL L
Sbjct: 131 TARDYNIEGGSVLHLVLAL 149
Score = 40.8 bits (94), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 11/130 (8%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE ++ VK +I K E + Q LI G++L+D R + D
Sbjct: 3 IFVKTLTGKTITLEVESSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLDDGRSLADYN 60
Query: 172 KRNEAVIHLL--VRKSAKVRAKPVQ-KDFEVSIEATELNEKGADVVGEH------QFETL 222
+ E+ +HL+ +R ++ K + K+ E+ IE T+ E+ + V E Q +
Sbjct: 61 IQKESSLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIERIKERVEEKEGIPPVQQRLI 120
Query: 223 FMGYQIRERK 232
+ G Q+ + K
Sbjct: 121 YAGKQMNDDK 130
>gi|222635996|gb|EEE66128.1| hypothetical protein OsJ_22175 [Oryza sativa Japonica Group]
Length = 208
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK E +E + +K+++ +K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEK--EGIPPVQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G++L D + D +V+HL++
Sbjct: 120 IYAGKQLADDKTAKDYNIEGGSVLHLVL 147
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 28 KLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
+L +++ ++ G I + + +D+I +K R++ G +Q+L++ G++LA +
Sbjct: 72 RLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLA-DDK 130
Query: 88 RVRDYGLADGNVLHLVLRL 106
+DY + G+VLHLVL L
Sbjct: 131 TAKDYNIEGGSVLHLVLAL 149
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 11/134 (8%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R + D
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 172 KRNEAVIHLL--VRKSAKVRAKPVQ-KDFEVSIEATELNEKGADVVGEH------QFETL 222
+ E+ +HL+ +R ++ K + K+ E+ IE T+ ++ + V E Q +
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
Query: 223 FMGYQIRERKLLQN 236
+ G Q+ + K ++
Sbjct: 121 YAGKQLADDKTAKD 134
>gi|30692436|ref|NP_564379.2| NEDD8-like protein RUB1 [Arabidopsis thaliana]
gi|302393813|sp|Q9SHE7.3|RUB1_ARATH RecName: Full=Ubiquitin-NEDD8-like protein RUB1; Contains: RecName:
Full=Ubiquitin; Contains: RecName: Full=NEDD8-like
protein RUB1; AltName: Full=Ubiquitin-related protein 1;
Short=AtRUB1; Flags: Precursor
gi|6692129|gb|AAF24594.1|AC007654_10 T19E23.13 [Arabidopsis thaliana]
gi|28973676|gb|AAO64156.1| putative ubiquitin (AtRUB1) [Arabidopsis thaliana]
gi|29824269|gb|AAP04095.1| putative ubiquitin (AtRUB1) [Arabidopsis thaliana]
gi|110737109|dbj|BAF00506.1| putative ubiquitin [Arabidopsis thaliana]
gi|312283039|dbj|BAJ34385.1| unnamed protein product [Thellungiella halophila]
gi|332193223|gb|AEE31344.1| NEDD8-like protein RUB1 [Arabidopsis thaliana]
Length = 156
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK E +E + +K+++ +K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEK--EGIPPVQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G++L D + D +V+HL++
Sbjct: 120 IYAGKQLADDKTAKDYNIEGGSVLHLVL 147
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 28 KLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
+L +++ ++ G I + + +D+I +K R++ G +Q+L++ G++LA +
Sbjct: 72 RLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLA-DDK 130
Query: 88 RVRDYGLADGNVLHLVLRL 106
+DY + G+VLHLVL L
Sbjct: 131 TAKDYNIEGGSVLHLVLAL 149
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R + D
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 172 KRNEAVIHLL--VRKSAKVRAKPVQ-KDFEVSIEATE 205
+ E+ +HL+ +R ++ K + K+ E+ IE T+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTD 97
>gi|115479211|ref|NP_001063199.1| Os09g0420800 [Oryza sativa Japonica Group]
gi|242044708|ref|XP_002460225.1| hypothetical protein SORBIDRAFT_02g024880 [Sorghum bicolor]
gi|357158453|ref|XP_003578133.1| PREDICTED: ubiquitin-NEDD8-like protein RUB1-like [Brachypodium
distachyon]
gi|302393765|sp|P0C030.2|RUB1_ORYSJ RecName: Full=Ubiquitin-NEDD8-like protein RUB1; Contains: RecName:
Full=Ubiquitin; Contains: RecName: Full=NEDD8-like
protein RUB1; AltName: Full=OsRUB1; AltName:
Full=Ubiquitin-related protein 1; Flags: Precursor
gi|50725971|dbj|BAD33498.1| polyubiquitin 2 [Oryza sativa Japonica Group]
gi|50726105|dbj|BAD33626.1| polyubiquitin 2 [Oryza sativa Japonica Group]
gi|113631432|dbj|BAF25113.1| Os09g0420800 [Oryza sativa Japonica Group]
gi|125563747|gb|EAZ09127.1| hypothetical protein OsI_31396 [Oryza sativa Indica Group]
gi|215704536|dbj|BAG94169.1| unnamed protein product [Oryza sativa Japonica Group]
gi|241923602|gb|EER96746.1| hypothetical protein SORBIDRAFT_02g024880 [Sorghum bicolor]
gi|326513616|dbj|BAJ87827.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 153
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK E +E + +K+++ +K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEK--EGIPPVQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G++L D + D +V+HL++
Sbjct: 120 IYAGKQLADDKTAKDYNIEGGSVLHLVL 147
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 28 KLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
+L +++ ++ G I + + +D+I +K R++ G +Q+L++ G++LA +
Sbjct: 72 RLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLA-DDK 130
Query: 88 RVRDYGLADGNVLHLVLRL 106
+DY + G+VLHLVL L
Sbjct: 131 TAKDYNIEGGSVLHLVLAL 149
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R + D
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 172 KRNEAVIHLL--VRKSAKVRAKPVQ-KDFEVSIEATE 205
+ E+ +HL+ +R ++ K + K+ E+ IE T+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTD 97
>gi|361584499|gb|AEW12072.1| polyubiquitin, partial [Drosophila melanogaster]
Length = 231
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ + Q+L+F G+ L + + DY +
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRT-LSDYNI 137
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ ++LVLRL I V T+ GK VE ++ VK +I K E + Q L
Sbjct: 138 QKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSLENVKARIHDK--EGIPPDQQRL 195
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ + Q+L+F G+ L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ ++LVLRL I V T+ GK VE + VK +I K E ++Q L
Sbjct: 62 QKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EENPPEHQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G+ LE+ R ++D + E+ I+L++R
Sbjct: 120 IFGGKHLENGRTLSDYNIQKESTIYLVLR 148
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDS+ +VK RI G +Q+L+F G++L + + DY +
Sbjct: 155 IFVKTLTGKTITLEVEPSDSLENVKARIHDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 213
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 214 QKESTLHLVLRL 225
>gi|156396888|ref|XP_001637624.1| predicted protein [Nematostella vectensis]
gi|156224738|gb|EDO45561.1| predicted protein [Nematostella vectensis]
Length = 147
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 79/148 (53%), Gaps = 5/148 (3%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I+V K F VE V VK++I + RE + K Q L
Sbjct: 62 QKESTLHLVLRLRGGMQISV-KAHWKTFTLDVEASDTVESVKEKI--QNREGIPPKVQRL 118
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
+ + EEL D R + D + +++HL +
Sbjct: 119 LYEEEELVDNRSLADYNIKQGSILHLFL 146
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R ++D
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 172 KRNEAVIHLL--VRKSAKVRAKPVQKDFEVSIEATELNE 208
+ E+ +HL+ +R ++ K K F + +EA++ E
Sbjct: 61 IQKESTLHLVLRLRGGMQISVKAHWKTFTLDVEASDTVE 99
>gi|380016682|ref|XP_003692305.1| PREDICTED: uncharacterized protein LOC100871808 [Apis florea]
Length = 377
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRL 119
Query: 155 ICDGEELEDQRLITD 169
I G++LED R++ D
Sbjct: 120 IFAGKQLEDGRVLGD 134
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R ++D
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 172 KRNEAVIHLLVR 183
+ E+ +HL++R
Sbjct: 61 IQKESTLHLVLR 72
>gi|449444274|ref|XP_004139900.1| PREDICTED: ubiquitin-NEDD8-like protein RUB1-like [Cucumis sativus]
gi|449532435|ref|XP_004173186.1| PREDICTED: ubiquitin-NEDD8-like protein RUB1-like [Cucumis sativus]
Length = 154
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK E +E + +K+++ +K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEK--EGIPPVQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G++L D + D +V+HL++
Sbjct: 120 IYAGKQLGDDKTAKDYNIEGGSVLHLVL 147
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 28 KLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
+L +++ ++ G I + + +D+I +K R++ G +Q+L++ G++L +
Sbjct: 72 RLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLG-DDK 130
Query: 88 RVRDYGLADGNVLHLVLRL 106
+DY + G+VLHLVL L
Sbjct: 131 TAKDYNIEGGSVLHLVLAL 149
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R + D
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 172 KRNEAVIHLL--VRKSAKVRAKPVQ-KDFEVSIEATE 205
+ E+ +HL+ +R ++ K + K+ E+ IE T+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTD 97
>gi|168036269|ref|XP_001770630.1| predicted protein [Physcomitrella patens subsp. patens]
gi|81230136|dbj|BAE48267.1| putative polyubiquitin [Physcomitrella patens]
gi|81230138|dbj|BAE48268.1| putative polyubiquitin [Physcomitrella patens]
gi|162678151|gb|EDQ64613.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 153
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDSIQNVKTKIQDKEGIPPDQQRLIFAGKQLEDERT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK E +E + +K+++ +K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPYDTIERIKERVEEK--EGIPPVQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G+++ D + D +V+HL++
Sbjct: 120 IFAGKQMNDDKTAKDYNIEGGSVLHLVL 147
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 11/134 (8%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE ++ VK +I K E + Q LI G++LED+R + D
Sbjct: 3 IFVKTLTGKTITLEVESSDSIQNVKTKIQDK--EGIPPDQQRLIFAGKQLEDERTLADYN 60
Query: 172 KRNEAVIHLL--VRKSAKVRAKPVQ-KDFEVSIEATELNEKGADVVGEH------QFETL 222
+ E+ +HL+ +R ++ K + K+ E+ IE + E+ + V E Q +
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPYDTIERIKERVEEKEGIPPVQQRLI 120
Query: 223 FMGYQIRERKLLQN 236
F G Q+ + K ++
Sbjct: 121 FAGKQMNDDKTAKD 134
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 28 KLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
+L +++ ++ G I + + D+I +K R++ G +Q+L+F G+++ +
Sbjct: 72 RLRGGTMIKVKTLTGKEIEIDIEPYDTIERIKERVEEKEGIPPVQQRLIFAGKQM-NDDK 130
Query: 88 RVRDYGLADGNVLHLVLRL 106
+DY + G+VLHLVL L
Sbjct: 131 TAKDYNIEGGSVLHLVLAL 149
>gi|226532866|ref|NP_001148606.1| LOC100282222 [Zea mays]
gi|194700092|gb|ACF84130.1| unknown [Zea mays]
gi|195619630|gb|ACG31645.1| polyubiquitin 2 [Zea mays]
gi|195620202|gb|ACG31931.1| polyubiquitin 2 [Zea mays]
gi|195620238|gb|ACG31949.1| polyubiquitin 2 [Zea mays]
gi|195620732|gb|ACG32196.1| polyubiquitin 2 [Zea mays]
gi|195620942|gb|ACG32301.1| polyubiquitin 2 [Zea mays]
gi|195628320|gb|ACG35990.1| polyubiquitin 2 [Zea mays]
gi|414885492|tpg|DAA61506.1| TPA: polyubiquitin 2 isoform 1 [Zea mays]
gi|414885493|tpg|DAA61507.1| TPA: polyubiquitin 2 isoform 2 [Zea mays]
Length = 153
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD++ +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTVDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK E +E ++ +K+++ +K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDSIDRIKERVEEK--EGIPPVQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G++L D + D +V+HL++
Sbjct: 120 IYAGKQLADDKTAKDYNIEGGSVLHLVL 147
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 28 KLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
+L +++ ++ G I + + +DSI +K R++ G +Q+L++ G++LA +
Sbjct: 72 RLRGGTMIKVKTLTGKEIEIDIEPTDSIDRIKERVEEKEGIPPVQQRLIYAGKQLA-DDK 130
Query: 88 RVRDYGLADGNVLHLVLRL 106
+DY + G+VLHLVL L
Sbjct: 131 TAKDYNIEGGSVLHLVLAL 149
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE V VK +I K E + Q LI G++LED R + D
Sbjct: 3 IFVKTLTGKTITLEVESSDTVDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 172 KRNEAVIHLL--VRKSAKVRAKPVQ-KDFEVSIEATE 205
+ E+ +HL+ +R ++ K + K+ E+ IE T+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTD 97
>gi|224066593|ref|XP_002302153.1| predicted protein [Populus trichocarpa]
gi|224082516|ref|XP_002306725.1| predicted protein [Populus trichocarpa]
gi|118485172|gb|ABK94447.1| unknown [Populus trichocarpa]
gi|222843879|gb|EEE81426.1| predicted protein [Populus trichocarpa]
gi|222856174|gb|EEE93721.1| predicted protein [Populus trichocarpa]
Length = 154
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK E +E + +K+++ +K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEK--EGIPPVQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G++L D + D +V+HL++
Sbjct: 120 IYAGKQLGDDKTARDYNIEGGSVLHLVL 147
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 28 KLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
+L +++ ++ G I + + +D+I +K R++ G +Q+L++ G++L +
Sbjct: 72 RLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGKQLG-DDK 130
Query: 88 RVRDYGLADGNVLHLVLRL 106
RDY + G+VLHLVL L
Sbjct: 131 TARDYNIEGGSVLHLVLAL 149
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R + D
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 172 KRNEAVIHLL--VRKSAKVRAKPVQ-KDFEVSIEATE 205
+ E+ +HL+ +R ++ K + K+ E+ IE +
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPND 97
>gi|168036461|ref|XP_001770725.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677943|gb|EDQ64407.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 153
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDSIQNVKTKIQDKEGIPPDQQRLIFAGKQLEDERT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK E +E + +K+++ +K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPYDTIERIKERVEEK--EGIPPVQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G+++ D + D +V+HL++
Sbjct: 120 IFAGKQMNDDKTARDYNIEGGSVLHLVL 147
Score = 43.9 bits (102), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 28 KLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
+L +++ ++ G I + + D+I +K R++ G +Q+L+F G+++ +
Sbjct: 72 RLRGGTMIKVKTLTGKEIEIDIEPYDTIERIKERVEEKEGIPPVQQRLIFAGKQM-NDDK 130
Query: 88 RVRDYGLADGNVLHLVLRL 106
RDY + G+VLHLVL L
Sbjct: 131 TARDYNIEGGSVLHLVLAL 149
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 11/130 (8%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE ++ VK +I K E + Q LI G++LED+R + D
Sbjct: 3 IFVKTLTGKTITLEVESSDSIQNVKTKIQDK--EGIPPDQQRLIFAGKQLEDERTLADYN 60
Query: 172 KRNEAVIHLL--VRKSAKVRAKPVQ-KDFEVSIEATELNEKGADVVGEH------QFETL 222
+ E+ +HL+ +R ++ K + K+ E+ IE + E+ + V E Q +
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPYDTIERIKERVEEKEGIPPVQQRLI 120
Query: 223 FMGYQIRERK 232
F G Q+ + K
Sbjct: 121 FAGKQMNDDK 130
>gi|225465030|ref|XP_002265864.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2 [Vitis vinifera]
gi|297736166|emb|CBI24204.3| unnamed protein product [Vitis vinifera]
Length = 155
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK E +E + +K+++ +K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEK--EGIPPVQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G++L D + D +V+HL++
Sbjct: 120 IYAGKQLGDDKTARDYNIEGGSVLHLVL 147
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 28 KLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
+L +++ ++ G I + + +D+I +K R++ G +Q+L++ G++L +
Sbjct: 72 RLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLG-DDK 130
Query: 88 RVRDYGLADGNVLHLVLRL 106
RDY + G+VLHLVL L
Sbjct: 131 TARDYNIEGGSVLHLVLAL 149
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R + D
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 172 KRNEAVIHLL--VRKSAKVRAKPVQ-KDFEVSIEATE 205
+ E+ +HL+ +R ++ K + K+ E+ IE T+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTD 97
>gi|7862066|gb|AAF70460.1|AF240445_1 polyubiquitin [Populus tremula x Populus tremuloides]
Length = 154
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDAIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK E +E + +K+++ +K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEK--EGIPPVQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G++L D + D +V+HL++
Sbjct: 120 IYAGKQLGDDKTARDYNIEGGSVLHLVL 147
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 28 KLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
+L +++ ++ G I + + +D+I +K R++ G +Q+L++ G++L +
Sbjct: 72 RLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGKQLG-DDK 130
Query: 88 RVRDYGLADGNVLHLVLRL 106
RDY + G+VLHLVL L
Sbjct: 131 TARDYNIEGGSVLHLVLAL 149
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R + D
Sbjct: 3 IFVKTLTGKTITLEVESSDAIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 172 KRNEAVIHLL--VRKSAKVRAKPVQ-KDFEVSIEATE 205
+ E+ +HL+ +R ++ K + K+ E+ IE +
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPND 97
>gi|326504848|dbj|BAK06715.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 153
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD++ +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTVDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK E +E + +K+++ +K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEK--EGIPPVQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G++L D + D +V+HL++
Sbjct: 120 IYAGKQLADDKTAKDYNIEGGSVLHLVL 147
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 28 KLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
+L +++ ++ G I + + +D+I +K R++ G +Q+L++ G++LA +
Sbjct: 72 RLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLA-DDK 130
Query: 88 RVRDYGLADGNVLHLVLRL 106
+DY + G+VLHLVL L
Sbjct: 131 TAKDYNIEGGSVLHLVLAL 149
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE V VK +I K E + Q LI G++L+D R + D
Sbjct: 3 IFVKTLTGKTITLEVESSDTVDNVKAKIQDK--EGIPPDQQRLIFAGKQLDDGRTLADYN 60
Query: 172 KRNEAVIHLL--VRKSAKVRAKPVQ-KDFEVSIEATE 205
+ E+ +HL+ +R ++ K + K+ E+ IE T+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTD 97
>gi|159472951|ref|XP_001694608.1| bi-ubiquitin [Chlamydomonas reinhardtii]
gi|158276832|gb|EDP02603.1| bi-ubiquitin [Chlamydomonas reinhardtii]
gi|300720946|gb|ADK33602.1| bi-ubiquitin [Chlamydomonas reinhardtii]
Length = 153
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK E +E + +K+++ +K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMMIKVKTLTGKEIEIDIEPSDTIERIKERVEEK--EGIPPVQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G+++ D + D +V+HL++
Sbjct: 120 IFAGKQMNDDKQAKDYNIEGGSVLHLVL 147
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + + SD+I +K R++ G +Q+L+F G+++ + + +DY + G+
Sbjct: 83 TLTGKEIEIDIEPSDTIERIKERVEEKEGIPPVQQRLIFAGKQM-NDDKQAKDYNIEGGS 141
Query: 99 VLHLVLRL 106
VLHLVL L
Sbjct: 142 VLHLVLAL 149
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 11/130 (8%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R + D
Sbjct: 3 IFVKTLTGKTITLEVESSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 172 KRNEAVIHLL--VRKSAKVRAKPVQ-KDFEVSIEATELNEKGADVVGEH------QFETL 222
+ E+ +HL+ +R ++ K + K+ E+ IE ++ E+ + V E Q +
Sbjct: 61 IQKESTLHLVLRLRGGMMIKVKTLTGKEIEIDIEPSDTIERIKERVEEKEGIPPVQQRLI 120
Query: 223 FMGYQIRERK 232
F G Q+ + K
Sbjct: 121 FAGKQMNDDK 130
>gi|413943514|gb|AFW76163.1| hypothetical protein ZEAMMB73_716174 [Zea mays]
Length = 153
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 76/148 (51%), Gaps = 3/148 (2%)
Query: 35 LIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
L L++ G I + V SD+I +VK +IQ G Q+L+F G++L + + DY +
Sbjct: 3 LFILTLTGKTITVEVESSDTIDNVKAKIQDKEGILPDHQRLIFAGKQLEDGKT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ L LVLRL I V T+ GK E +E + +K+++ +K E + Q L
Sbjct: 62 QKESTLPLVLRLKGGTMIKVKTLTGKEIEIDIEPNDTIYRIKERVEEK--EGIPPIQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G++L D + D +V+HL++
Sbjct: 120 IYAGKQLADDKTAKDYNIEGGSVLHLVL 147
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 28 KLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
+L +++ ++ G I + + +D+I +K R++ G +Q+L++ G++LA +
Sbjct: 72 RLKGGTMIKVKTLTGKEIEIDIEPNDTIYRIKERVEEKEGIPPIQQRLIYAGKQLA-DDK 130
Query: 88 RVRDYGLADGNVLHLVLRL 106
+DY + G+VLHLVL L
Sbjct: 131 TAKDYNIEGGSVLHLVLAL 149
>gi|194692052|gb|ACF80110.1| unknown [Zea mays]
Length = 70
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 44/61 (72%), Gaps = 2/61 (3%)
Query: 265 GLERGLTPFDIGCIMCRKTLKDESVIEQIVREAQDAVLPGTSEDGFLESVASIMDRHLDD 324
G+ERGLT F IG IMCR+TL ES IE+IVREA + G E FL++V+ IMDR LDD
Sbjct: 6 GVERGLTAFHIGSIMCRETLTKESAIEEIVREAAER--GGGCETVFLQAVSEIMDRRLDD 63
Query: 325 L 325
+
Sbjct: 64 I 64
>gi|255544634|ref|XP_002513378.1| ubiquitin, putative [Ricinus communis]
gi|223547286|gb|EEF48781.1| ubiquitin, putative [Ricinus communis]
Length = 154
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK E +E + +K+++ +K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEK--EGIPPVQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G++L D + D +V+HL++
Sbjct: 120 IYAGKQLGDDKTARDYNIEGGSVLHLVL 147
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 28 KLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
+L +++ ++ G I + + +D+I +K R++ G +Q+L++ G++L +
Sbjct: 72 RLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLG-DDK 130
Query: 88 RVRDYGLADGNVLHLVLRL 106
RDY + G+VLHLVL L
Sbjct: 131 TARDYNIEGGSVLHLVLAL 149
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R + D
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 172 KRNEAVIHLL--VRKSAKVRAKPVQ-KDFEVSIEATE 205
+ E+ +HL+ +R ++ K + K+ E+ IE T+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTD 97
>gi|346466265|gb|AEO32977.1| hypothetical protein [Amblyomma maculatum]
Length = 168
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 77/147 (52%), Gaps = 3/147 (2%)
Query: 36 IFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLA 95
I ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 19 IVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQ 77
Query: 96 DGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELI 155
+ LHLVLRL I V T+ GK E +E + +K+++ +K E + Q LI
Sbjct: 78 KESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEK--EGIPPVQQRLI 135
Query: 156 CDGEELEDQRLITDICKRNEAVIHLLV 182
G++L D + + +V+HL++
Sbjct: 136 YAGKQLADDKTAKEYNIEGGSVLHLVL 162
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 28 KLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
+L +++ ++ G I + + +D+I +K R++ G +Q+L++ G++LA +
Sbjct: 87 RLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLA-DDK 145
Query: 88 RVRDYGLADGNVLHLVLRL 106
++Y + G+VLHLVL L
Sbjct: 146 TAKEYNIEGGSVLHLVLAL 164
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 114 VTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKR 173
V T+ GK VE + VK +I K E + Q LI G++LED R + D +
Sbjct: 20 VKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQ 77
Query: 174 NEAVIHLL--VRKSAKVRAKPVQ-KDFEVSIEATE 205
E+ +HL+ +R ++ K + K+ E+ IE T+
Sbjct: 78 KESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTD 112
>gi|224083970|ref|XP_002307191.1| predicted protein [Populus trichocarpa]
gi|118481405|gb|ABK92645.1| unknown [Populus trichocarpa]
gi|118486039|gb|ABK94863.1| unknown [Populus trichocarpa]
gi|222856640|gb|EEE94187.1| predicted protein [Populus trichocarpa]
Length = 157
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK E +E + VK+++ +K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRVKERVEEK--EGIPPVQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G++L D + D +V+HL++
Sbjct: 120 IYAGKQLGDDKTARDYNIEGGSVLHLVL 147
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 28 KLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
+L +++ ++ G I + + +D+I VK R++ G +Q+L++ G++L +
Sbjct: 72 RLRGGTMIKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLG-DDK 130
Query: 88 RVRDYGLADGNVLHLVLRL 106
RDY + G+VLHLVL L
Sbjct: 131 TARDYNIEGGSVLHLVLAL 149
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R + D
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 172 KRNEAVIHLL--VRKSAKVRAKPVQ-KDFEVSIEATE 205
+ E+ +HL+ +R ++ K + K+ E+ IE T+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTD 97
>gi|339233028|ref|XP_003381631.1| ubiquitin family protein [Trichinella spiralis]
gi|316979531|gb|EFV62315.1| ubiquitin family protein [Trichinella spiralis]
Length = 203
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 81/172 (47%), Gaps = 25/172 (14%)
Query: 35 LIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEG-RELA--------- 83
LIF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G +E+
Sbjct: 25 LIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGNKEITILDKEGIPP 84
Query: 84 ------------RSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRN 131
+ DY + + LHLVLRL I V T+ GK VE
Sbjct: 85 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 144
Query: 132 VGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
+ VK +I K E + Q LI G++LED R ++D + E+ +HL++R
Sbjct: 145 IENVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 194
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 129 TLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 187
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 188 TLHLVLRL 195
>gi|380026660|ref|XP_003697063.1| PREDICTED: polyubiquitin-A-like, partial [Apis florea]
Length = 130
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 3/127 (2%)
Query: 57 SVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTT 116
+VK +IQ G +Q+L+F G++L + + DY + + LHLVLRL I V T
Sbjct: 2 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQIFVKT 60
Query: 117 VCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEA 176
+ GK VE + VK +I K E + Q LI G++LED R ++D + E+
Sbjct: 61 LTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 118
Query: 177 VIHLLVR 183
+HL++R
Sbjct: 119 TLHLVLR 125
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 56 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 114
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 115 QKESTLHLVLRL 126
>gi|357494497|ref|XP_003617537.1| Bi-ubiquitin [Medicago truncatula]
gi|355518872|gb|AET00496.1| Bi-ubiquitin [Medicago truncatula]
gi|388497058|gb|AFK36595.1| unknown [Medicago truncatula]
Length = 153
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK E +E + +K+++ +K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEK--EGIPPVQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G++L D + + +V+HL++
Sbjct: 120 IYAGKQLADDKTAKEYNIEGGSVLHLVL 147
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 28 KLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
+L +++ ++ G I + + +D+I +K R++ G +Q+L++ G++LA +
Sbjct: 72 RLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLA-DDK 130
Query: 88 RVRDYGLADGNVLHLVLRL 106
++Y + G+VLHLVL L
Sbjct: 131 TAKEYNIEGGSVLHLVLAL 149
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R + D
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 172 KRNEAVIHLL--VRKSAKVRAKPVQ-KDFEVSIEATE 205
+ E+ +HL+ +R ++ K + K+ E+ IE T+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTD 97
>gi|403352030|gb|EJY75518.1| Polyubiquitin-C [Oxytricha trifallax]
Length = 385
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 80/145 (55%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V + +SI S++ ++Q G + +L+F G+EL + ++DYG+ +
Sbjct: 159 ALTGRTITLEVEQDESIESIRAKLQDKEGIPPDQLRLIFGGKELLVGKT-LKDYGIQKES 217
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
+ VLRL I V T+ GK VE ++ ++++I KG +V L+ +G
Sbjct: 218 TIFTVLRLRGGMNIYVKTLSGKTKTLEVEESDSIEIIREKILDKG--WVPPDQVRLVFNG 275
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
+ LED R ++D +NE+ +HL+++
Sbjct: 276 KLLEDGRYLSDYNIQNESTLHLVLK 300
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Query: 40 VGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNV 99
V G + V ESD+IA VK +IQ L F G+ L + ++DY + + +
Sbjct: 8 VNGKTYAIDVDESDTIAMVKQKIQEKVVTLPDPLWLAFGGKFLDNKKT-IKDYNIGNQST 66
Query: 100 LHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGE 159
L+ VL L I V T+ GK VE + ++ +I K D + L+ G+
Sbjct: 67 LYQVLNLKGGVQIFVRTLTGKTITIEVELDDTIECIRAKIQDKPGMPPD--HIRLVFGGK 124
Query: 160 ELEDQRLITDICKRNEAVIHLLVR 183
+L+D ++++D + E+ IH+++R
Sbjct: 125 KLQDGKILSDYGLQKESTIHMVLR 148
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V D+I ++ +IQ G +LVF G++L + + DYGL +
Sbjct: 83 TLTGKTITIEVELDDTIECIRAKIQDKPGMPPDHIRLVFGGKKL-QDGKILSDYGLQKES 141
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
+H+VLRL I V + G+ VE+ ++ ++ ++ K E + LI G
Sbjct: 142 TIHMVLRLRGGMQIFVKALTGRTITLEVEQDESIESIRAKLQDK--EGIPPDQLRLIFGG 199
Query: 159 EELEDQRLITDICKRNEAVIHLLVR 183
+EL + + D + E+ I ++R
Sbjct: 200 KELLVGKTLKDYGIQKESTIFTVLR 224
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 3/148 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G + V ESDSI ++ +I + +LVF G+ L + DY + + +
Sbjct: 235 TLSGKTKTLEVEESDSIEIIREKILDKGWVPPDQVRLVFNGK-LLEDGRYLSDYNIQNES 293
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVL+L I T+ GK V+ + +K I K E + LI
Sbjct: 294 TLHLVLKLRIGMQIHAKTLGGKTLTLPVDENEPIENIKAMIQNK--EGIPADQLRLIIGA 351
Query: 159 EELEDQRLITDICKRNEAVIHLLVRKSA 186
++LED + ++D +N+ I ++++ A
Sbjct: 352 KQLEDGKTLSDYNIQNDYAILIVLKLKA 379
>gi|255572891|ref|XP_002527377.1| hypothetical protein RCOM_0869330 [Ricinus communis]
gi|223533248|gb|EEF35002.1| hypothetical protein RCOM_0869330 [Ricinus communis]
Length = 86
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 51/77 (66%), Gaps = 8/77 (10%)
Query: 1 MSMACVALSPVLEESLNFPG---NFTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIAS 57
MS+ VALSP+ +ES F G N L + SILI+LSV GS+IPMRV+ESDSIAS
Sbjct: 1 MSVVDVALSPIHKESKKFHGYCNNSRQGTTVLEDSSILIYLSVAGSLIPMRVLESDSIAS 60
Query: 58 VKLRIQSYNGFFVKKQK 74
VK RIQ+ KKQK
Sbjct: 61 VKRRIQT-----CKKQK 72
>gi|356525758|ref|XP_003531490.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2-like [Glycine max]
gi|356556999|ref|XP_003546806.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2-like [Glycine max]
gi|255627501|gb|ACU14095.1| unknown [Glycine max]
Length = 154
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK E +E + +K+++ +K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEK--EGIPPVQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G++L D + + +V+HL++
Sbjct: 120 IYAGKQLADDKTAKEYNIEGGSVLHLVL 147
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 28 KLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
+L +++ ++ G I + + +D+I +K R++ G +Q+L++ G++LA +
Sbjct: 72 RLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLA-DDK 130
Query: 88 RVRDYGLADGNVLHLVLRL 106
++Y + G+VLHLVL L
Sbjct: 131 TAKEYNIEGGSVLHLVLAL 149
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R + D
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 172 KRNEAVIHLL--VRKSAKVRAKPVQ-KDFEVSIEATE 205
+ E+ +HL+ +R ++ K + K+ E+ IE T+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTD 97
>gi|452113248|gb|AGG08881.1| ubiquitin, partial [Rana clamitans]
Length = 126
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 3/127 (2%)
Query: 52 SDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQA 111
SD+I +VK +IQ G +Q+L+F G++L + + DY + + LHLVLRL
Sbjct: 3 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQ 61
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R ++D
Sbjct: 62 IFVKTLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPNQQRLIFAGKQLEDGRTLSDYN 119
Query: 172 KRNEAVI 178
+ E+ +
Sbjct: 120 IQKESTL 126
>gi|118793820|ref|XP_321091.3| AGAP001970-PA [Anopheles gambiae str. PEST]
gi|116115995|gb|EAA01176.4| AGAP001970-PA [Anopheles gambiae str. PEST]
Length = 236
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 77/146 (52%), Gaps = 5/146 (3%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRV-RDYGLADG 97
++ G I + V+ S+++ +K +I+ G +Q+++F G++L + R+ DY + G
Sbjct: 7 TLTGKTITLDVIASETVLDIKSKIEQREGIAPDQQRIIFAGKQL--DDGRIISDYNIQHG 64
Query: 98 NVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICD 157
+ +HLVLRL I V + GK E V VK+QI + RE + Q +I
Sbjct: 65 STMHLVLRLKGGMQIFVRMLTGKTIAIDTEPEATVESVKKQIDE--REEIPPNQQRMIFA 122
Query: 158 GEELEDQRLITDICKRNEAVIHLLVR 183
G++LED R + + + IHL++R
Sbjct: 123 GKQLEDGRQLQEYSIIKASTIHLVLR 148
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 3/142 (2%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + ++ SVK +I +Q+++F G++L ++++Y + + +H
Sbjct: 86 GKTIAIDTEPEATVESVKKQIDEREEIPPNQQRMIFAGKQL-EDGRQLQEYSIIKASTIH 144
Query: 102 LVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEEL 161
LVLRL I V + GK E V VK+QI + RE + Q +I G++L
Sbjct: 145 LVLRLKGGMQIFVRMLTGKTIAVDTEPEATVESVKKQIDE--REEIPPNQQRMIFAGKQL 202
Query: 162 EDQRLITDICKRNEAVIHLLVR 183
ED R + + + IHL++R
Sbjct: 203 EDGRQLQEYSIIKASTIHLVLR 224
>gi|281203713|gb|EFA77909.1| ubiquitin/ribosomal protein S27a fusion protein [Polysphondylium
pallidum PN500]
Length = 167
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 77/147 (52%), Gaps = 3/147 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 17 TLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 75
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I + ++ GK+ VE ++ VK +I +K E + Q LI G
Sbjct: 76 TLHLVLRLRGGMEIFIKSLTGKIITLKVEDSDSIENVKSKIQEK--EGIPPDQQRLIFVG 133
Query: 159 EELEDQRLITDICKRNEAVIHLLVRKS 185
L+D R ++D + E+ + V K+
Sbjct: 134 RILDDGRTLSDYNIQKESTLIWFVSKA 160
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ S+ G +I ++V +SDSI +VK +IQ G +Q+L+F GR L + + DY +
Sbjct: 89 IFIKSLTGKIITLKVEDSDSIENVKSKIQEKEGIPPDQQRLIFVGRILDDGRT-LSDYNI 147
Query: 95 ADGNVL 100
+ L
Sbjct: 148 QKESTL 153
>gi|157503117|gb|ABV58641.1| ubiquitin [Catharanthus roseus]
Length = 137
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 3/127 (2%)
Query: 57 SVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTT 116
+VK +IQ G +Q+L+F G++L + + DY + + LHLVLRL I V T
Sbjct: 2 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLHLVLRLRGGMQIFVKT 60
Query: 117 VCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEA 176
+ GK VE + VK +I K E + Q LI G++LED R + D E+
Sbjct: 61 LTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIXKES 118
Query: 177 VIHLLVR 183
+HL++R
Sbjct: 119 TLHLVLR 125
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 60 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIXKES 118
Query: 99 VLHLVLRLSDLQAITVTTV 117
LHLVLRL I V T+
Sbjct: 119 TLHLVLRLRGGMQIFVKTM 137
>gi|388508634|gb|AFK42383.1| unknown [Medicago truncatula]
Length = 153
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK E +E + +K+++ +K E + Q +
Sbjct: 62 QKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEK--EGIPPVQQRV 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G++L D + + +V+HL++
Sbjct: 120 IYAGKQLADDKTAKEYNIEGGSVLHLVL 147
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R + D
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 172 KRNEAVIHLL--VRKSAKVRAKPVQ-KDFEVSIEATE 205
+ E+ +HL+ +R ++ K + K+ E+ IE T+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTD 97
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 28 KLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
+L +++ ++ G I + + +D+I +K R++ G +Q++++ G++LA +
Sbjct: 72 RLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRVIYAGKQLA-DDK 130
Query: 88 RVRDYGLADGNVLHLVLRL 106
++Y + G+VLHLVL L
Sbjct: 131 TAKEYNIEGGSVLHLVLAL 149
>gi|356533093|ref|XP_003535103.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-like [Glycine max]
Length = 226
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 71/135 (52%), Gaps = 4/135 (2%)
Query: 50 MESDSIA-SVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSD 108
M +D A ++KL I + G +Q+L+F G++L + V DY + + + LHLVLRL
Sbjct: 90 MPTDEDAINLKLLITIFAGILPDQQRLIFVGKQLEDGRTLV-DYNIQNESTLHLVLRLRG 148
Query: 109 LQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLIT 168
I V T+ GK VE + VK +I K E + LI G++LED R +
Sbjct: 149 GMQIFVKTLIGKTITLEVESCDTIDNVKAKIQDK--EGIPPDQXRLIFAGKQLEDGRTLA 206
Query: 169 DICKRNEAVIHLLVR 183
D + E+++HL +R
Sbjct: 207 DYDIQKESILHLPLR 221
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + V D+I +VK +IQ G + +L+F G++L + + DY + ++LH
Sbjct: 159 GKTITLEVESCDTIDNVKAKIQDKEGIPPDQXRLIFAGKQLEDGRT-LADYDIQKESILH 217
Query: 102 LVLRL 106
L LRL
Sbjct: 218 LPLRL 222
>gi|182407852|gb|ACB87917.1| polyubiquitin 2 [Malus x domestica]
Length = 177
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 70/133 (52%), Gaps = 4/133 (3%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 48 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 106
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K + + Q L
Sbjct: 107 QKESTLHLVLRLRRGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--DGIPPDQQTL 164
Query: 155 ICDGEELEDQRLI 167
I G++LED R +
Sbjct: 165 IFAGKQLEDGRTL 177
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Query: 67 GFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHV 126
G +Q+L+F G++L + + DY + + LHLVLRL I V T+ GK V
Sbjct: 4 GIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 62
Query: 127 ERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
E + VK +I K E + Q LI G++LED R + D + E+ +HL++R
Sbjct: 63 ESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 117
>gi|154416813|ref|XP_001581428.1| polyubiquitin [Trichomonas vaginalis G3]
gi|121915655|gb|EAY20442.1| polyubiquitin, putative [Trichomonas vaginalis G3]
Length = 147
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 3/140 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V +D I VK +IQ G +Q+L+F G++L N+ ++DY + +
Sbjct: 7 TLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNT-LQDYSIQKDS 65
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 66 TLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDK--EGIPPDQQRLIFAG 123
Query: 159 EELEDQRLITDICKRNEAVI 178
++LED + D + ++++
Sbjct: 124 KQLEDGNTLQDYSIQKDSIL 143
>gi|353237461|emb|CCA69433.1| related to UBI4-Ubiquitin [Piriformospora indica DSM 11827]
Length = 195
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 42/189 (22%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK------------ 142
+ LHLVLRL I V T+ GK VE + VK +I K
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRMQI 121
Query: 143 ----------------------------GREFVDLKNQELICDGEELEDQRLITDICKRN 174
+E + Q LI G++LED R ++D +
Sbjct: 122 FVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 181
Query: 175 EAVIHLLVR 183
E+ +HL++R
Sbjct: 182 ESTLHLVLR 190
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 121 IFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 179
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 180 QKESTLHLVLRL 191
>gi|340382024|ref|XP_003389521.1| PREDICTED: polyubiquitin-like, partial [Amphimedon queenslandica]
Length = 921
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 90/176 (51%), Gaps = 7/176 (3%)
Query: 20 GNFTHRPEKLSNDSILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFE 78
G H L S++IFL ++ G I + V +DSI +VK++IQ G +Q+LVF+
Sbjct: 78 GTIIHLVLPLHRSSMIIFLKTLTGKTITLEVERTDSIENVKIKIQEKEGIPPNQQRLVFD 137
Query: 79 GRELARSNSRVRDYGLADGNVLHLVLRLS-DLQAITVTTVCGKVFEFHVERGRNVGYVKQ 137
GR+L + DY + + L L+L + +Q T+ K+F VE + VK
Sbjct: 138 GRQL-EDGPTLSDYRIQKESTLLLLLCVQGGMQIFVKQTLTNKIFTLEVEPSDTIKTVKA 196
Query: 138 QIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHL--LVRKSAKVRAK 191
+I K+ + D QEL D ++LED ++D + E+++ L L+ S K+ K
Sbjct: 197 KIQKELGDPPDY--QELKLDDKQLEDGHTLSDYKVQKESMLELSPLLEVSMKIFVK 250
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 13/152 (8%)
Query: 40 VGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGREL-------ARSNSRVR-- 90
+ G + + V SD+I+ +K +I+ G +QK++F + L S ++++
Sbjct: 555 LSGEKMELNVNFSDTISDIKAKIEEIQGIPCNRQKIMFAKKRLEDDYVEKVLSPNKIKTL 614
Query: 91 -DYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDL 149
D+ + DG+ +HL+ L I + G+ F V+ + +K +I K E +
Sbjct: 615 IDHNITDGSTMHLIF-LRGGMTIFIKLPSGRTISFEVDPSDTIKTIKYKIQDK--EKLSP 671
Query: 150 KNQELICDGEELEDQRLITDICKRNEAVIHLL 181
Q LI + LED ++D + E +HLL
Sbjct: 672 NQQRLIFAFKRLEDHYTLSDYNIQKEDTMHLL 703
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 5/161 (3%)
Query: 34 ILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYG 93
I + ++ + + V SD+I +VK +IQ G Q+L + ++L ++ + DY
Sbjct: 170 IFVKQTLTNKIFTLEVEPSDTIKTVKAKIQKELGDPPDYQELKLDDKQLEDGHT-LSDYK 228
Query: 94 LADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQI-AKKGREFVDLKNQ 152
+ ++L L L I V K V R + VK +I +KG + Q
Sbjct: 229 VQKESMLELSPLLEVSMKIFVKAFTFKTITLEVNRSDTIENVKAKILHEKG---IQPDQQ 285
Query: 153 ELICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVRAKPV 193
+LI +G+ LED +++ +NEA ++LL+ + + K V
Sbjct: 286 KLIFNGKRLEDGCKLSNYFIQNEATLNLLLPEDISINIKVV 326
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 56/118 (47%), Gaps = 4/118 (3%)
Query: 22 FTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRE 81
+H P +N I F G +I + V+ +D+I+++K I+ Q L + GR+
Sbjct: 464 LSHYPRGGANIYIRTF---TGKMIVIEVLPTDTISNLKKMIRDKEKISPDNQTLFYAGRQ 520
Query: 82 LARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQI 139
L + S + +Y + ++L LV + ++V + G+ E +V + +K +I
Sbjct: 521 LDDA-STLANYDIPMESILQLVTSFNPTMKVSVKLLSGEKMELNVNFSDTISDIKAKI 577
>gi|118484809|gb|ABK94272.1| unknown [Populus trichocarpa]
Length = 154
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +I G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKILDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK E +E + +K+++ +K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEK--EGIPPVQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G++L D + D +V+HL++
Sbjct: 120 IYAGKQLGDDKTARDYNIEGGSVLHLVL 147
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 28 KLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
+L +++ ++ G I + + +D+I +K R++ G +Q+L++ G++L +
Sbjct: 72 RLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGKQLG-DDK 130
Query: 88 RVRDYGLADGNVLHLVLRL 106
RDY + G+VLHLVL L
Sbjct: 131 TARDYNIEGGSVLHLVLAL 149
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R + D
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKILDK--EGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 172 KRNEAVIHLL--VRKSAKVRAKPVQ-KDFEVSIEATE 205
+ E+ +HL+ +R ++ K + K+ E+ IE +
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPND 97
>gi|148905774|gb|ABR16051.1| unknown [Picea sitchensis]
gi|148906367|gb|ABR16338.1| unknown [Picea sitchensis]
gi|148906448|gb|ABR16377.1| unknown [Picea sitchensis]
Length = 153
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I ++K +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLDVESSDTIDNIKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL +I V T+ GK E +E + +KQ++ +K E + Q L
Sbjct: 62 QKESTLHLVLRLRGGISIKVKTLTGKEVEIDIEPHDTIERIKQRVEEK--EGIPPIQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G+++ D + + +V+HL++
Sbjct: 120 IYGGKQMNDDKTAREYNIEGGSVLHLVL 147
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + +K +I K E + Q LI G++LED R + D
Sbjct: 3 IFVKTLTGKTITLDVESSDTIDNIKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 172 KRNEAVIHLLVRKSAKVRAKP---VQKDFEVSIEATELNEK 209
+ E+ +HL++R + K K+ E+ IE + E+
Sbjct: 61 IQKESTLHLVLRLRGGISIKVKTLTGKEVEIDIEPHDTIER 101
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G + + + D+I +K R++ G +Q+L++ G+++ + R+Y + G+
Sbjct: 83 TLTGKEVEIDIEPHDTIERIKQRVEEKEGIPPIQQRLIYGGKQM-NDDKTAREYNIEGGS 141
Query: 99 VLHLVLRL 106
VLHLVL L
Sbjct: 142 VLHLVLAL 149
>gi|115438809|ref|NP_001043684.1| Os01g0641200 [Oryza sativa Japonica Group]
gi|302393767|sp|P0C032.2|RUB3_ORYSJ RecName: Full=Ubiquitin-like protein-NEDD8-like protein RUB3;
Contains: RecName: Full=Ubiquitin-like protein;
Contains: RecName: Full=NEDD8-like protein RUB3;
AltName: Full=OsRUB3; AltName: Full=Ubiquitin-related
protein 3; Flags: Precursor
gi|20161535|dbj|BAB90457.1| putative polyubiquitin 2 [Oryza sativa Japonica Group]
gi|20805124|dbj|BAB92795.1| putative polyubiquitin 2 [Oryza sativa Japonica Group]
gi|113533215|dbj|BAF05598.1| Os01g0641200 [Oryza sativa Japonica Group]
gi|125527016|gb|EAY75130.1| hypothetical protein OsI_03024 [Oryza sativa Indica Group]
gi|125571348|gb|EAZ12863.1| hypothetical protein OsJ_02783 [Oryza sativa Japonica Group]
Length = 154
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK ++Q G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL + V T+ GK + +E V +K+++ + RE + Q L
Sbjct: 62 QKESTLHLVLRLRGGLNVKVRTLTGKEIDIDIEMTDTVDRIKERVEE--REGIPPVQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G++L D + D +V+HL++
Sbjct: 120 IYGGKQLADDKTAHDYKIEAGSVLHLVL 147
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + + +D++ +K R++ G +Q+L++ G++LA + DY + G+
Sbjct: 83 TLTGKEIDIDIEMTDTVDRIKERVEEREGIPPVQQRLIYGGKQLA-DDKTAHDYKIEAGS 141
Query: 99 VLHLVLRL 106
VLHLVL L
Sbjct: 142 VLHLVLAL 149
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK ++ K E + Q LI G++LED R + D
Sbjct: 3 IFVKTLTGKTITLEVESSDTIQNVKAKVQDK--EGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 172 KRNEAVIHLLVRKSAKVRAKP---VQKDFEVSIEATE 205
+ E+ +HL++R + K K+ ++ IE T+
Sbjct: 61 IQKESTLHLVLRLRGGLNVKVRTLTGKEIDIDIEMTD 97
>gi|148908993|gb|ABR17600.1| unknown [Picea sitchensis]
Length = 252
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 70/140 (50%), Gaps = 3/140 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD I ++K IQ G +Q+L+F G++L + + DY + +
Sbjct: 7 TLTGKTISLEVESSDIIDNLKADIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 65
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 66 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGILPDQQSLIFAG 123
Query: 159 EELEDQRLITDICKRNEAVI 178
++LED R + D + E+ I
Sbjct: 124 KQLEDGRNLADYNIQKESTI 143
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 7/147 (4%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q L+F G++L + DY + +
Sbjct: 83 TLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQSLIFAGKQL-EDGRNLADYNIQKES 141
Query: 99 VL----HLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ + +RL+ I V T+ G+ V + VK +I +G++ + Q L
Sbjct: 142 TILGTSFIRVRLTSDMLIFVITLTGEAITLVVATSDTIYDVKAKI--QGKKGIPPFRQRL 199
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLL 181
I G++LED+R + + + +H++
Sbjct: 200 IFAGKQLEDRRNLAYYNIQKWSTLHVV 226
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 28 KLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELA-RSN 86
+L++D ++ +++ G I + V SD+I VK +IQ G +Q+L+F G++L R N
Sbjct: 152 RLTSDMLIFVITLTGEAITLVVATSDTIYDVKAKIQGKKGIPPFRQRLIFAGKQLEDRRN 211
Query: 87 SRVRDYGLADGNVLHLVLRLSDLQAITVTT 116
+ Y + + LH+V + Q+ +T
Sbjct: 212 --LAYYNIQKWSTLHVVFCIPPRQSTPHST 239
>gi|297833748|ref|XP_002884756.1| hypothetical protein ARALYDRAFT_478302 [Arabidopsis lyrata subsp.
lyrata]
gi|297330596|gb|EFH61015.1| hypothetical protein ARALYDRAFT_478302 [Arabidopsis lyrata subsp.
lyrata]
Length = 598
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 78/152 (51%), Gaps = 10/152 (6%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L ++ + DY + +
Sbjct: 61 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGHT-LADYSIQKES 119
Query: 99 VLHLVLRLSDLQAITVTTVCGKVF-----EFHVERGRNVGYVKQQIAKKGREFVDLKNQE 153
LHLVLRL I V T GK F VE + VK +I + RE + +Q
Sbjct: 120 TLHLVLRLRGGMQIFVITFPGKNFTGETLTLEVESSDTIDSVKAKI--QDREGLRPDHQR 177
Query: 154 LICDGEEL--EDQRLITDICKRNEAVIHLLVR 183
L GEEL +D R + D +N++ +HL R
Sbjct: 178 LSFHGEELFTKDGRTLADYGIQNKSALHLGTR 209
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 5/141 (3%)
Query: 44 VIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH-L 102
I + V SD+I +VK++IQ G + +Q L+F GR L + + + DY + + +H L
Sbjct: 461 TITLEVESSDTIDNVKVKIQHKVGIPLDRQSLIFGGRVLVGTRTLL-DYNIQKESTIHQL 519
Query: 103 VLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELE 162
L+ +Q I + T+ GK VE + VK++I K E + Q LI G++LE
Sbjct: 520 FLQRGGMQ-IFIKTLTGKTIMLEVENSDTIANVKEKIQVK--EGITPVQQRLIFFGKQLE 576
Query: 163 DQRLITDICKRNEAVIHLLVR 183
D + D C + ++L++R
Sbjct: 577 DGVTLGDYCIHKNSTLYLVLR 597
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 76/175 (43%), Gaps = 27/175 (15%)
Query: 16 LNFPG-NFTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQK 74
+ FPG NFT G + + V SD+I SVK +IQ G Q+
Sbjct: 136 ITFPGKNFT------------------GETLTLEVESSDTIDSVKAKIQDREGLRPDHQR 177
Query: 75 LVFEGRELARSNSR-VRDYGLADGNVLHLVLRLSDLQAITV-----TTVCGKVFEFHVER 128
L F G EL + R + DYG+ + + LHL RL I V T G+ F VE
Sbjct: 178 LSFHGEELFTKDGRTLADYGIQNKSALHLGTRLRGNMYIFVKNLPYNTFTGENFILEVES 237
Query: 129 GRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
+ VK +I +K E + + LI G+ LE R + + + ++L+ R
Sbjct: 238 SDTIDNVKAKIQEK--EGIPMDLHRLIFAGKPLEGGRTLAHYNIQKGSTLYLVTR 290
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 66/143 (46%), Gaps = 7/143 (4%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V D+I +VK IQ G Q+L+F G+EL + DYG+ +
Sbjct: 301 TLTGKRINLEVESWDTIENVKAMIQDKEGIQPDLQRLIFLGKEL-KDRCTPADYGIQKES 359
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVL + I V GK+ V + VK +I K D Q LI G
Sbjct: 360 TLHLVLGMQ----IFVKLFGGKIITLEVVSSDTIESVKAKIQDKVGSPPD--QQRLIFLG 413
Query: 159 EELEDQRLITDICKRNEAVIHLL 181
ELED R + D RNE+ + L
Sbjct: 414 HELEDGRTLADYDIRNESTLRLF 436
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 3/148 (2%)
Query: 35 LIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
L + + G + V SD+I +VK +IQ G + +L+F G+ L + + Y +
Sbjct: 221 LPYNTFTGENFILEVESSDTIDNVKAKIQEKEGIPMDLHRLIFAGKPLEGGRT-LAHYNI 279
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
G+ L+LV R I V T+ GK VE + VK I K E + Q L
Sbjct: 280 QKGSTLYLVTRFRCGMQIFVKTLTGKRINLEVESWDTIENVKAMIQDK--EGIQPDLQRL 337
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G+EL+D+ D + E+ +HL++
Sbjct: 338 IFLGKELKDRCTPADYGIQKESTLHLVL 365
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 91 DYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLK 150
DY + + LHLVLRL I V T+ GK VE + VK +I K E +
Sbjct: 36 DYSIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPD 93
Query: 151 NQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G++LED + D + E+ +HL++R
Sbjct: 94 QQRLIFAGKQLEDGHTLADYSIQKESTLHLVLR 126
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 70/155 (45%), Gaps = 13/155 (8%)
Query: 36 IFLSV-GGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ + GG +I + V+ SD+I SVK +IQ G +Q+L+F G EL + + DY +
Sbjct: 369 IFVKLFGGKIITLEVVSSDTIESVKAKIQDKVGSPPDQQRLIFLGHELEDGRT-LADYDI 427
Query: 95 ADGNVLHLVLRLSDLQAITVTT--------VCGKVFEFHVERGRNVGYVKQQIAKKGREF 146
+ + L L + I V T C K VE + VK +I K
Sbjct: 428 RNESTLRLFFHIPHGMQIFVKTYAFSGETPTC-KTITLEVESSDTIDNVKVKIQHKVG-- 484
Query: 147 VDLKNQELICDGEELEDQRLITDICKRNEAVIHLL 181
+ L Q LI G L R + D + E+ IH L
Sbjct: 485 IPLDRQSLIFGGRVLVGTRTLLDYNIQKESTIHQL 519
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 29 LSNDSILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNS 87
L + IF+ ++ G I + V SD+IA+VK +IQ G +Q+L+F G++L
Sbjct: 521 LQRGGMQIFIKTLTGKTIMLEVENSDTIANVKEKIQVKEGITPVQQRLIFFGKQL-EDGV 579
Query: 88 RVRDYGLADGNVLHLVLRL 106
+ DY + + L+LVLRL
Sbjct: 580 TLGDYCIHKNSTLYLVLRL 598
>gi|116783396|gb|ABK22925.1| unknown [Picea sitchensis]
Length = 262
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 70/140 (50%), Gaps = 3/140 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD I ++K IQ G +Q+L+F G++L + + DY + +
Sbjct: 7 TLTGKTISLEVESSDIIDNLKADIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 65
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 66 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGILPDQQSLIFAG 123
Query: 159 EELEDQRLITDICKRNEAVI 178
++LED R + D + E+ I
Sbjct: 124 KQLEDGRNLADYNIQKESTI 143
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 77/157 (49%), Gaps = 7/157 (4%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q L+F G++L + DY + +
Sbjct: 83 TLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQSLIFAGKQL-EDGRNLADYNIQKES 141
Query: 99 VL----HLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ + +RL+ I V T+ G+ V + VK +I +G++ + Q L
Sbjct: 142 TILGTSFIRVRLTSDMLIFVITLTGEAITLVVATSDTIYDVKAKI--QGKKGIPPFRQRL 199
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVRKSAKVRAK 191
I G++LED+R + + + +H+ +R + +R +
Sbjct: 200 IFAGKQLEDRRNLAYYNIQKWSTLHVDLRLTCGLRNR 236
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 28 KLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELA-RSN 86
+L++D ++ +++ G I + V SD+I VK +IQ G +Q+L+F G++L R N
Sbjct: 152 RLTSDMLIFVITLTGEAITLVVATSDTIYDVKAKIQGKKGIPPFRQRLIFAGKQLEDRRN 211
Query: 87 SRVRDYGLADGNVLHLVLRLS 107
+ Y + + LH+ LRL+
Sbjct: 212 --LAYYNIQKWSTLHVDLRLT 230
>gi|392569336|gb|EIW62509.1| ubiquitin [Trametes versicolor FP-101664 SS1]
Length = 397
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 80/147 (54%), Gaps = 8/147 (5%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ +V G P+ V+ SD+I VK + + G +Q+L+F G+EL + + DYG+
Sbjct: 152 IFVKTVAGETTPLEVVSSDTIKDVKEKYRDKEGAVPAQQRLIFAGKEL-EDDCILSDYGI 210
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ +HLVLRL +Q I V + GK + +G V+++I R+ ++ + +
Sbjct: 211 QKDSTVHLVLRLPGMQ-IFVKSYTGKTITIEAKSSDTIGCVRERI----RDTKEIPSDYI 265
Query: 155 I-CDGEELEDQRLITDICKRNEAVIHL 180
+ +ELED R+++D + + +HL
Sbjct: 266 LKFADKELEDDRMLSDYNIQWDDTLHL 292
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 5/143 (3%)
Query: 42 GSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLH 101
G I + V SD+I +VK I G +Q+L+F G++L S+ V DY L G+ +
Sbjct: 11 GKTITLEVDSSDTIENVKAMIHDKEGVAPNQQRLIFAGKQLD-SHRTVSDYNLRKGSTVF 69
Query: 102 LVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQI-AKKGREFVDLKNQELICDGEE 160
L+ R+ D I V T+ GK V+ + +K +I AK+G Q + E+
Sbjct: 70 LMFRVLDGMQIFVKTLSGKTITLEVKPLDTIRNIKAKIQAKEGNP---PDQQRIKFAEEQ 126
Query: 161 LEDQRLITDICKRNEAVIHLLVR 183
LED R ++D + + + L+ R
Sbjct: 127 LEDDRTLSDYNIQWNSTLQLVGR 149
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 8/153 (5%)
Query: 32 DSILIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVR 90
D + IF+ ++ G I + V D+I ++K +IQ+ G +Q++ F +L + +
Sbjct: 76 DGMQIFVKTLSGKTITLEVKPLDTIRNIKAKIQAKEGNPPDQQRIKFAEEQL-EDDRTLS 134
Query: 91 DYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLK 150
DY + + L LV R I V TV G+ V + VK++ + +E
Sbjct: 135 DYNIQWNSTLQLVGRFQ----IFVKTVAGETTPLEVVSSDTIKDVKEKY--RDKEGAVPA 188
Query: 151 NQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
Q LI G+ELED +++D + ++ +HL++R
Sbjct: 189 QQRLIFAGKELEDDCILSDYGIQKDSTVHLVLR 221
>gi|428168160|gb|EKX37108.1| ubiquitin [Guillardia theta CCMP2712]
Length = 199
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 3/126 (2%)
Query: 58 VKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTV 117
VK +IQ G +Q+L+F G++L + + DY + + LHLVLRL I V T+
Sbjct: 2 VKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLHLVLRLRGGMQIFVKTL 60
Query: 118 CGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAV 177
GK VE + VK +I K E + Q LI G++LED R + D + E+
Sbjct: 61 TGKTITLEVESSDTIDMVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 118
Query: 178 IHLLVR 183
+HL++R
Sbjct: 119 LHLVLR 124
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 55 IFVKTLTGKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 113
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 114 QKESTLHLVLRL 125
>gi|5523987|gb|AAD44046.1|AF104029_1 polyprotein [Bovine viral diarrhea virus 2]
Length = 395
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 65/124 (52%), Gaps = 3/124 (2%)
Query: 60 LRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCG 119
+IQ G +Q+L+F G++L + + DY + + LHLVLRL I V T+ G
Sbjct: 214 FKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 272
Query: 120 KVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIH 179
K VE + VK +I K E + Q LI G++LED R ++D + E+ +H
Sbjct: 273 KTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 330
Query: 180 LLVR 183
L++R
Sbjct: 331 LVLR 334
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 265 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 323
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 324 QKESTLHLVLRL 335
>gi|83944648|gb|ABC48928.1| ubiquitin [Eisenia fetida]
Length = 121
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 65/124 (52%), Gaps = 3/124 (2%)
Query: 58 VKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTV 117
+K +IQ G +Q+L+F G++L + + DY + + LHLVLRL I V T+
Sbjct: 1 LKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQIFVKTL 59
Query: 118 CGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAV 177
GK VE + VK +I K E + Q LI G++LED R ++D + E+
Sbjct: 60 TGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 117
Query: 178 IHLL 181
+HL+
Sbjct: 118 LHLV 121
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 54 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 112
Query: 95 ADGNVLHLV 103
+ LHLV
Sbjct: 113 QKESTLHLV 121
>gi|6650740|gb|AAF21992.1| polyubiquitin [Lilium longiflorum]
Length = 153
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 76/149 (51%), Gaps = 6/149 (4%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDREGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + VK +I K E + L
Sbjct: 62 HKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIHDK--EGIP-PTTRL 118
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G ED R + D + E+ +HL++R
Sbjct: 119 IFAGTA-EDGRTLADYNIQKESTLHLVLR 146
>gi|413949281|gb|AFW81930.1| hypothetical protein ZEAMMB73_693456 [Zea mays]
Length = 153
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 3/148 (2%)
Query: 35 LIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
+ L + G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVLMLTGKTITLDVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ L LVLRL I V T+ K E ++E + +K+ + + RE + Q L
Sbjct: 62 QKESTLPLVLRLKGGTMIKVKTLTRKEIEINIEPNDTIDRIKEHVEE--REGIPPVQQRL 119
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLV 182
I G++L D + D +V+HL++
Sbjct: 120 IYAGKQLADDKTAKDYNIEGGSVLHLVL 147
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 45 IPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVL 104
I + + +D+I +K ++ G +Q+L++ G++LA + +DY + G+VLHLVL
Sbjct: 89 IEINIEPNDTIDRIKEHVEEREGIPPVQQRLIYAGKQLA-DDKTAKDYNIEGGSVLHLVL 147
Query: 105 RL 106
L
Sbjct: 148 AL 149
>gi|255966040|gb|ACU45305.1| polyubiquitin 6 [Rhodomonas sp. CCMP768]
Length = 125
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 3/123 (2%)
Query: 61 RIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGK 120
+IQ G +Q+ +F G++L + + DY + + LHLVLRL I V T+ GK
Sbjct: 1 KIQDKEGIPPDQQRWIFAGKQLEDGRT-LADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 59
Query: 121 VFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHL 180
VE + VK +I K E + Q LI G++LED R + D + E+ +HL
Sbjct: 60 TITLEVESSDTIDMVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 117
Query: 181 LVR 183
++R
Sbjct: 118 VLR 120
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 51 IFVKTLTGKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 109
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 110 QKESTLHLVLRL 121
>gi|170034791|ref|XP_001845256.1| ubiquitin [Culex quinquefasciatus]
gi|167876386|gb|EDS39769.1| ubiquitin [Culex quinquefasciatus]
Length = 154
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 79/146 (54%), Gaps = 4/146 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V D+I ++K +I+ G +Q+L+F G++L + + DY + G+
Sbjct: 7 TLTGKTITLDVEPVDTIQNIKGKIEDKEGIPPDQQRLIFAGKQLEDGRA-LSDYNVQKGS 65
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQ-ELICD 157
LHLVLRL I V + G+ F +E+ V +KQ+++++ E NQ LI
Sbjct: 66 TLHLVLRLRGGFQIFVKMLTGRCFTVDIEQEDTVDTLKQRVSERLEEMP--ANQCRLIFA 123
Query: 158 GEELEDQRLITDICKRNEAVIHLLVR 183
G++LED R + + + +HL++R
Sbjct: 124 GKQLEDGRTVGEYSVIKGSTLHLVLR 149
>gi|5523973|gb|AAD44039.1|AF104022_1 polyprotein [Bovine viral diarrhea virus 2]
Length = 228
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 68/128 (53%), Gaps = 3/128 (2%)
Query: 56 ASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVT 115
+++KL Q + +Q+L+F G++L + + DY + + LHLVLRL I V
Sbjct: 43 STLKLPHQRKKWLQLYQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQIFVK 101
Query: 116 TVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNE 175
T+ GK VE + VK +I K E + Q LI G++LED R ++D + E
Sbjct: 102 TLTGKTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 159
Query: 176 AVIHLLVR 183
+ +HL++R
Sbjct: 160 STLHLVLR 167
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 102 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKES 160
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 161 TLHLVLRL 168
>gi|449533510|ref|XP_004173717.1| PREDICTED: polyubiquitin-like, partial [Cucumis sativus]
Length = 126
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
Query: 60 LRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCG 119
LR + G +Q+L+F G++L + + DY + + LHLVLRL I V T+ G
Sbjct: 1 LRSEDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLHLVLRLRGGMQIFVKTLTG 59
Query: 120 KVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIH 179
K VE + VK +I K E + Q LI G++LED R + D + E+ +H
Sbjct: 60 KTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 117
Query: 180 LLVR 183
L++R
Sbjct: 118 LVLR 121
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 56 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 114
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 115 TLHLVLRL 122
>gi|281209949|gb|EFA84117.1| UBiQuitin family member isoform 1 [Polysphondylium pallidum PN500]
Length = 156
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 75/143 (52%), Gaps = 5/143 (3%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SDSI +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 7 TLTGKTITLEVEGSDSIENVKTKIQDKEGIPPDQQRLIFAGKQLEDERT-LSDYNIQKES 65
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK-GREFVDLKNQELICD 157
LHLVLRL + V T+ GK+ V+ + VK ++ +K G Q LI +
Sbjct: 66 TLHLVLRLRGGMQVFVETLSGKIITIKVKESDTIENVKAKVTEKLG---YPPNEQILIFN 122
Query: 158 GEELEDQRLITDICKRNEAVIHL 180
++LE+ R + D + E+ I+L
Sbjct: 123 NKKLENGRTLFDYNIQKESTIYL 145
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE ++ VK +I K E + Q LI G++LED+R ++D
Sbjct: 3 IFVKTLTGKTITLEVEGSDSIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDERTLSDYN 60
Query: 172 KRNEAVIHLLVR 183
+ E+ +HL++R
Sbjct: 61 IQKESTLHLVLR 72
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G +I ++V ESD+I +VK ++ G+ +Q L+F ++L + + DY + +
Sbjct: 83 TLSGKIITIKVKESDTIENVKAKVTEKLGYPPNEQILIFNNKKLENGRT-LFDYNIQKES 141
Query: 99 VLHLVLRLSD 108
++L L + D
Sbjct: 142 TIYLKLWMRD 151
>gi|403289148|ref|XP_003935728.1| PREDICTED: polyubiquitin-B-like [Saimiri boliviensis boliviensis]
Length = 165
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 61 RIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGK 120
R+Q G +Q+L+F G++L ++ + DY + + LHLVLRL I V T+ GK
Sbjct: 41 RVQDKEGIPPDQQRLIFAGKQLEDGHT-LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 99
Query: 121 VFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHL 180
VE + VK +I K E + Q LI G++LED R ++ + E+ +HL
Sbjct: 100 TITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSXYNIQKESTLHL 157
Query: 181 LVR 183
++R
Sbjct: 158 VLR 160
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + Y +
Sbjct: 91 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSXYNI 149
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 150 QKESTLHLVLRL 161
>gi|224284138|gb|ACN39806.1| unknown [Picea sitchensis]
Length = 252
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 3/140 (2%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD I ++K IQ G +Q+L+F G++L + + DY + +
Sbjct: 7 TLTGKTISLEVESSDIIDNLKADIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 65
Query: 99 VLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDG 158
LHLVLRL I V T+ GK VE + VK +I K E + Q LI G
Sbjct: 66 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGILPDQQSLIFAG 123
Query: 159 EELEDQRLITDICKRNEAVI 178
++L D R + D + E+ I
Sbjct: 124 KQLGDGRNLADYNIQKESTI 143
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 73/147 (49%), Gaps = 7/147 (4%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q L+F G++L + + DY + +
Sbjct: 83 TLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQSLIFAGKQLGDGRN-LADYNIQKES 141
Query: 99 VL----HLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ + +RL+ I V T+ G+ V + VK +I +G++ + Q L
Sbjct: 142 TILGTSFIRVRLTSDMLIFVITLTGEAITLVVATSDTIYDVKAKI--QGKKGIPPFRQRL 199
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLL 181
I G++LED+R + + + +H++
Sbjct: 200 IFAGKQLEDRRNLAYYNIQKWSTLHVV 226
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 28 KLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELA-RSN 86
+L++D ++ +++ G I + V SD+I VK +IQ G +Q+L+F G++L R N
Sbjct: 152 RLTSDMLIFVITLTGEAITLVVATSDTIYDVKAKIQGKKGIPPFRQRLIFAGKQLEDRRN 211
Query: 87 SRVRDYGLADGNVLHLVLRLSDLQAITVTT 116
+ Y + + LH+V + Q+ +T
Sbjct: 212 --LAYYNIQKWSTLHVVFCIPPRQSTPHST 239
>gi|296415756|ref|XP_002837552.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633424|emb|CAZ81743.1| unnamed protein product [Tuber melanosporum]
Length = 205
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 21/149 (14%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK E + Q L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLE-------------------EGIPPDQQRL 102
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 103 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 131
>gi|340374063|ref|XP_003385558.1| PREDICTED: polyubiquitin-C-like, partial [Amphimedon queenslandica]
Length = 675
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 29/213 (13%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGR-------ELARSNSRVR- 90
++ G I + V SD+++ +K +I+ G +QK++F R E A S +++
Sbjct: 182 TLSGKTIKLNVNFSDTVSDIKRKIEEMEGIPCHEQKIIFGQRLLGEDYIEEALSPGKIKT 241
Query: 91 --DYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVD 148
D+ + DG++LHL+ S + V GK+ E + VK +I K +E +
Sbjct: 242 LLDHNVKDGSILHLIFP-SRASGVIVKFPAGKIIMLDTEPSDTIENVKAKI--KDKEGIP 298
Query: 149 LKNQELICDGEELEDQRLITDICKRNEAVIHLLVRK---SAKVRAKP---------VQKD 196
Q LI LED R ++D +N+ IHLL+ + S KV K V+
Sbjct: 299 PDQQRLIFAFRRLEDGRTLSDYNIQNKDTIHLLLHRFGTSMKVFVKAFTGNMITLQVEPS 358
Query: 197 FEV-SIEATELNEKGADVVGEHQFETLFMGYQI 228
F + S++ L+E+G V H E LF G Q+
Sbjct: 359 FTIESVKYMILDEEG---VPLHLQELLFAGKQL 388
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 78/150 (52%), Gaps = 3/150 (2%)
Query: 35 LIFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYG 93
++F+ + G+ I ++V +D+I ++K +IQ+ + +QKL+ R+ ++ + DY
Sbjct: 24 MVFIKTATGNTITLKVDPNDTIENIKSQIQAKKMIPIDQQKLITRYRKQLDNSLTLSDYN 83
Query: 94 LADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQE 153
+ D +L+L L I + T GK+ F V V Y+K+ I + +E + +Q
Sbjct: 84 IEDKAILYLTHYLRSGTDIYIRTFSGKMVVFEVLPTDTVSYLKKMI--RDKEGISSNDQT 141
Query: 154 LICDGEELEDQRLITDICKRNEAVIHLLVR 183
L G++L+D + + E+++ L+ R
Sbjct: 142 LFYAGQQLDDASTLANYDIPMESMLQLVTR 171
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 4/141 (2%)
Query: 41 GGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVL 100
G +I + SD+I +VK +I+ G +Q+L+F R L + + DY + + + +
Sbjct: 270 AGKIIMLDTEPSDTIENVKAKIKDKEGIPPDQQRLIFAFRRLEDGRT-LSDYNIQNKDTI 328
Query: 101 HLVL-RLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGE 159
HL+L R + V G + VE + VK I + E V L QEL+ G+
Sbjct: 329 HLLLHRFGTSMKVFVKAFTGNMITLQVEPSFTIESVKYMILDE--EGVPLHLQELLFAGK 386
Query: 160 ELEDQRLITDICKRNEAVIHL 180
+L++ ++ +NE + L
Sbjct: 387 QLDNGHQLSHYNIKNENTLDL 407
>gi|578550|emb|CAA80336.1| ubiquitin [Tetrahymena pyriformis]
Length = 225
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 97/202 (48%), Gaps = 10/202 (4%)
Query: 40 VGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNV 99
+ G + + V SD+I VK IQ+ G +++Q+L+ G+ L + + Y + +
Sbjct: 8 LNGKTMTLEVTHSDTIEKVKSLIQNKEGILIEQQRLLHTGKNLENQRT-LSYYSIQIQST 66
Query: 100 LHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGE 159
L L +R S + I V T+ GK V + +K I+ K E + I G+
Sbjct: 67 LQLEIRQSGVMQIFVQTLAGKTITLDVTSSNTINDIKSMISDK--ESIPPDELRFIFAGK 124
Query: 160 ELEDQRLITDICKRNEAVIHL-LVRKSAKVRAKPVQKDFEVSIEATE----LNEKGADVV 214
LE++R ++D+ + E +HL L+R S K+ + + K F + ++ ++ + K D
Sbjct: 125 FLEEERTLSDLNIQKENTLHLVLIRVSMKIFVRTLCKIFTLEVDPSDNIKTVKTKIQDKE 184
Query: 215 G--EHQFETLFMGYQIRERKLL 234
G Q + +F G ++ + K L
Sbjct: 185 GIPSDQLKLIFSGTKLEDEKTL 206
>gi|62953168|emb|CAG28691.1| polyubiquitin [Fusarium fujikuroi]
Length = 116
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
Query: 72 KQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRN 131
+Q+L+F G++L + + DY + + LHLVLRL I V T+ GK VE
Sbjct: 3 QQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 61
Query: 132 VGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
+ VK +I K E + Q LI G++LED R ++D + E+ +HL++R
Sbjct: 62 IDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 111
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 42 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 100
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 101 QKESTLHLVLRL 112
>gi|323208|gb|AAA42855.1| nonstructural protein; putative helicase/protease; contains
duplication; contains ubiquitin-coding region; putative,
partial [Bovine viral diarrhea virus 1]
Length = 1896
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 63 QSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVF 122
Q G +Q+L+F G++L + + DY + + LHLVLRL I V T+ GK
Sbjct: 944 QDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 1002
Query: 123 EFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLV 182
VE + VK +I K E + Q LI G++LED R ++D + E+ +HL++
Sbjct: 1003 TLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 1060
Query: 183 R 183
R
Sbjct: 1061 R 1061
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 992 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 1050
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 1051 QKESTLHLVLRL 1062
>gi|773585|emb|CAA35578.1| ubiquitin [Tetrahymena pyriformis]
Length = 116
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 72 KQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRN 131
+Q+L+F G++L + V DY + + LHLVLRL I V T+ GK V N
Sbjct: 5 QQRLIFAGKQLEDGRT-VSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVNSTDN 63
Query: 132 VGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
+ VK +I K E + Q LI G++LED R I D E+ +HL++R
Sbjct: 64 IENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRSIADYNISKESTLHLVLR 113
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V +D+I +VK +IQ G +Q+L+F G++L S + DY +
Sbjct: 44 IFVKTLTGKTITLDVNSTDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRS-IADYNI 102
Query: 95 ADGNVLHLVLRL 106
+ + LHLVLRL
Sbjct: 103 SKESTLHLVLRL 114
>gi|225704622|gb|ACO08157.1| Ubiquitin [Oncorhynchus mykiss]
Length = 144
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V D+I +VK +IQ G + + +GR L+ DY +
Sbjct: 3 IFVKTLTGKTITLEVEPGDTIENVKAKIQDKEGIPPDQ---LEDGRTLS-------DYNI 52
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE + V +I K E + Q L
Sbjct: 53 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVMAKIQDK--EGIPPDQQRL 110
Query: 155 ICDGEELEDQRLITDICKRNEAVIHLLVR 183
I G++LED R ++D + E+ +HL++R
Sbjct: 111 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 139
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +V +IQ G +Q+L+F G++L + + DY +
Sbjct: 70 IFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 128
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 129 QKESTLHLVLRL 140
>gi|224096634|ref|XP_002310680.1| predicted protein [Populus trichocarpa]
gi|222853583|gb|EEE91130.1| predicted protein [Populus trichocarpa]
Length = 149
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Query: 47 MRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRL 106
+ V SD+I SVK +IQ G + +L F G+ L + + DY + G+ LHL LRL
Sbjct: 10 LEVDSSDTIDSVKAKIQDKEGIPPDQLRLFFAGKRLEDGRT-LADYNIQKGSTLHLNLRL 68
Query: 107 SDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRL 166
I V T+ GK E +E + +K+++ +K E + Q LI G++L D +
Sbjct: 69 RGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEK--EGIPPVQQRLIYAGKQLGDDKT 126
Query: 167 ITDICKRNEAVIHLLV 182
D +V+HL++
Sbjct: 127 ARDYNIEGGSVLHLVL 142
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 20 GNFTHRPEKLSNDSILIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEG 79
G+ H +L +++ ++ G I + + +D+I +K R++ G +Q+L++ G
Sbjct: 59 GSTLHLNLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAG 118
Query: 80 RELARSNSRVRDYGLADGNVLHLVLRL 106
++L + RDY + G+VLHLVL L
Sbjct: 119 KQLG-DDKTARDYNIEGGSVLHLVLAL 144
>gi|5523985|gb|AAD44045.1|AF104028_1 polyprotein [Bovine viral diarrhea virus 2]
Length = 357
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
Query: 60 LRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCG 119
+IQ G +Q+L+F G++L + + DY + + LHLVLRL I V T+ G
Sbjct: 176 FKIQDNEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 234
Query: 120 KVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIH 179
K VE + VK +I K E + Q LI G++LED R ++ + E+ +H
Sbjct: 235 KTITLEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSGYNIQKESTLH 292
Query: 180 LLVR 183
L++R
Sbjct: 293 LVLR 296
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + Y +
Sbjct: 227 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSGYNI 285
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 286 QKESTLHLVLRL 297
>gi|149063235|gb|EDM13558.1| rCG21224 [Rattus norvegicus]
Length = 163
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 35 LIFLSVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
LIF G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 43 LIF---AGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 98
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE N VKQ+ + V K+
Sbjct: 99 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVNTKKVKQEDTRTFLTTVSRKSPSC 158
Query: 155 IC 156
C
Sbjct: 159 AC 160
>gi|308480326|ref|XP_003102370.1| hypothetical protein CRE_04940 [Caenorhabditis remanei]
gi|308262036|gb|EFP05989.1| hypothetical protein CRE_04940 [Caenorhabditis remanei]
Length = 194
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 78 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPADQQRLIFAGKQLEDGRT-LSDYNI 136
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK-GREFV 147
+ LHLVLRL + V T+ GK VE + VK +I KK G FV
Sbjct: 137 QKESTLHLVLRLRGGMQMFVKTLTGKTITLDVEASDTIENVKAKIQKKIGNIFV 190
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 98 NVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICD 157
+ LHLVLRL I V T+ GK VE + VK +I K E + Q LI
Sbjct: 64 STLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPADQQRLIFA 121
Query: 158 GEELEDQRLITDICKRNEAVIHLLVR 183
G++LED R ++D + E+ +HL++R
Sbjct: 122 GKQLEDGRTLSDYNIQKESTLHLVLR 147
>gi|149063233|gb|EDM13556.1| rCG21222, isoform CRA_b [Rattus norvegicus]
Length = 179
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Query: 67 GFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHV 126
G +Q+L+F G++L + + DY + + LHLVLRL I V T+ GK V
Sbjct: 12 GIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 70
Query: 127 ERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
E + VK +I K E + Q LI G++LED R ++D + E+ +HL++R
Sbjct: 71 EPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 125
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 2/122 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 56 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 114
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQEL 154
+ LHLVLRL I V T+ GK VE N VKQ+ + V K+
Sbjct: 115 QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVNTKKVKQEDTRTFLTTVSRKSPSC 174
Query: 155 IC 156
C
Sbjct: 175 AC 176
>gi|224159432|ref|XP_002338082.1| predicted protein [Populus trichocarpa]
gi|222870685|gb|EEF07816.1| predicted protein [Populus trichocarpa]
Length = 118
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 61
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVKQQIAKK 142
+ LHLVLRL I V T+ GK E +E + +K+++ +K
Sbjct: 62 QKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEK 109
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 112 ITVTTVCGKVFEFHVERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDIC 171
I V T+ GK VE + VK +I K E + Q LI G++LED R + D
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 172 KRNEAVIHLL--VRKSAKVRAKPVQ-KDFEVSIEATE 205
+ E+ +HL+ +R ++ K + K+ E+ IE +
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPND 97
>gi|84796035|gb|ABC66105.1| putative pentameric polyubiquitin [Zinnia violacea]
Length = 122
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Query: 67 GFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHV 126
G +Q+L+F G++L + + DY + + LHLVLRL I V T+ GK V
Sbjct: 4 GIPPDQQRLIFAGKQLEDGRT-LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 62
Query: 127 ERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
E + VK +I K E + Q LI G++LED R + D + E+ +HL++R
Sbjct: 63 ESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 117
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 39 SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGLADGN 98
++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY + +
Sbjct: 52 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNIQKES 110
Query: 99 VLHLVLRL 106
LHLVLRL
Sbjct: 111 TLHLVLRL 118
>gi|5523977|gb|AAD44041.1|AF104024_1 polyprotein [Bovine viral diarrhea virus 2]
Length = 365
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Query: 66 NGFFVKKQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFH 125
G +Q+L+F G++L + + DY + + LHLVLRL I V T+ GK
Sbjct: 190 GGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 248
Query: 126 VERGRNVGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
VE + VK +I K E + Q LI G++LED R ++D + E+ +HL++R
Sbjct: 249 VEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 304
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 235 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNI 293
Query: 95 ADGNVLHLVLRL 106
+ LHLVLRL
Sbjct: 294 QKESTLHLVLRL 305
>gi|17016983|gb|AAL33551.1|AF436850_1 polyubiquitin [Cucumis melo]
Length = 143
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
Query: 72 KQKLVFEGRELARSNSRVRDYGLADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRN 131
+Q+L+F G++L + + DY + + LHLVLRL I V T+ GK VE
Sbjct: 3 QQRLIFAGKQLEDGRT-LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 61
Query: 132 VGYVKQQIAKKGREFVDLKNQELICDGEELEDQRLITDICKRNEAVIHLLVR 183
+ VK +I K E + Q LI G++LED R + D + E+ +HL++R
Sbjct: 62 IDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 111
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 36 IFL-SVGGSVIPMRVMESDSIASVKLRIQSYNGFFVKKQKLVFEGRELARSNSRVRDYGL 94
IF+ ++ G I + V SD+I +VK +IQ G +Q+L+F G++L + + DY +
Sbjct: 42 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LADYNI 100
Query: 95 ADGNVLHLVLRLSDLQAITVTTVCGKVFEFHVERGRNVGYVK 136
+ LHLVLRL I V T+ GK VE + VK
Sbjct: 101 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 142
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.138 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,808,651,794
Number of Sequences: 23463169
Number of extensions: 186346597
Number of successful extensions: 474009
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 2733
Number of HSP's that attempted gapping in prelim test: 459869
Number of HSP's gapped (non-prelim): 6774
length of query: 333
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 190
effective length of database: 9,003,962,200
effective search space: 1710752818000
effective search space used: 1710752818000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)