Your job contains 1 sequence.
>019971
MESQNQYEVDLGNLLAFNHSHHFPSLPSSREELVKECLEEGTKLVQAIADRLFNLPSTED
VDGPIVTLPPPTTKLPRSKHLPKPKPPTKWELFAKKKGIKKRKKDKVVWDEQTGTWKRRF
GYDRVDDDRDVPIIEAKMTDEPGEDPFAKRQEEKKKRVAKQDKNRLQNLKQAAKVGALPS
HVQLAATALPITGTQAAPKKFTKHELGDVAGIAATSTASGGKFDKKVPGEKAPKHQGKHR
KFLPVVEGSGIGSREKEQTDKVLNKLFSKHSHEILNVEKAVTAYNVKREKKQRLKHNKNV
EDKSLSTSNKLKPKKQLNKKSAKKGSSKKGKAK
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019971
(333 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2065553 - symbol:AT2G37990 species:3702 "Arabi... 989 1.2e-99 1
ZFIN|ZDB-GENE-030131-9345 - symbol:rrs1 "RRS1 ribosome bi... 373 2.2e-34 1
MGI|MGI:1929721 - symbol:Rrs1 "RRS1 ribosome biogenesis r... 359 6.7e-33 1
UNIPROTKB|F1RTZ0 - symbol:RRS1 "Uncharacterized protein" ... 358 8.5e-33 1
RGD|1311403 - symbol:Rrs1 "RRS1 ribosome biogenesis regul... 355 1.8e-32 1
UNIPROTKB|F1PRD1 - symbol:RRS1 "Uncharacterized protein" ... 352 3.7e-32 1
UNIPROTKB|Q15050 - symbol:RRS1 "Ribosome biogenesis regul... 351 4.7e-32 1
UNIPROTKB|F1MPT7 - symbol:RRS1 "Ribosome biogenesis regul... 350 6.0e-32 1
UNIPROTKB|Q2KIH4 - symbol:RRS1 "Ribosome biogenesis regul... 350 6.0e-32 1
DICTYBASE|DDB_G0274521 - symbol:rrs1 "ribosome biogenesis... 321 7.1e-29 1
WB|WBGene00007617 - symbol:rrbs-1 species:6239 "Caenorhab... 309 1.3e-27 1
FB|FBgn0052409 - symbol:CG32409 species:7227 "Drosophila ... 211 7.2e-17 1
SGD|S000005820 - symbol:RRS1 "Essential protein that bind... 196 1.3e-15 1
ASPGD|ASPL0000010989 - symbol:AN3745 species:162425 "Emer... 182 3.8e-14 1
POMBASE|SPBC29A3.16 - symbol:rrs1 "ribosome biogenesis pr... 182 3.8e-14 1
CGD|CAL0005046 - symbol:RRS1 species:5476 "Candida albica... 180 6.2e-14 1
UNIPROTKB|Q5ABR3 - symbol:RRS1 "Likely ribosome biogenesi... 180 6.2e-14 1
UNIPROTKB|G4MQQ2 - symbol:MGG_09302 "Ribosome biogenesis ... 144 9.5e-10 1
UNIPROTKB|F1LZ13 - symbol:F1LZ13 "Uncharacterized protein... 148 2.0e-08 1
>TAIR|locus:2065553 [details] [associations]
symbol:AT2G37990 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0000478 "endonucleolytic cleavage involved in rRNA processing"
evidence=RCA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0006626 "protein
targeting to mitochondrion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009909 "regulation of
flower development" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] InterPro:IPR007023 Pfam:PF04939
PANTHER:PTHR17602 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005730 GO:GO:0042254 EMBL:AY088030 EMBL:AK222003
IPI:IPI00540167 PIR:F84799 RefSeq:NP_565878.1 UniGene:At.14638
UniGene:At.66348 STRING:Q9SH88 PaxDb:Q9SH88 PRIDE:Q9SH88
EnsemblPlants:AT2G37990.1 GeneID:818377 KEGG:ath:AT2G37990
TAIR:At2g37990 eggNOG:COG5225 HOGENOM:HOG000017552
InParanoid:Q9SH88 KO:K14852 OMA:MAYDPSH PhylomeDB:Q9SH88
ProtClustDB:CLSN2917262 Genevestigator:Q9SH88 GermOnline:AT2G37990
Uniprot:Q9SH88
Length = 318
Score = 989 (353.2 bits), Expect = 1.2e-99, P = 1.2e-99
Identities = 196/308 (63%), Positives = 225/308 (73%)
Query: 1 MESQNQYEVDLGNLLAFNHSHHFPSLPSSREELVKECLEEGTKLVQAIADRLFNLPSTED 60
ME++ Y+VD+GNLLAFN +H FPS PSSR ELVKE L EGTKLVQ IA++LFN PSTE
Sbjct: 5 METEQIYQVDVGNLLAFNPNHRFPSAPSSRGELVKEILTEGTKLVQEIANKLFNFPSTET 64
Query: 61 VDGPIVTLPPPTTKLPRSKHLPKPKPPTKWELFAXXXXXXXXXXXXVVWDEQTGTWKRRF 120
DGPIV LPPPTTKLPR KH+P+PKPPTKWE FA VVWDEQT +KRR
Sbjct: 65 NDGPIVQLPPPTTKLPREKHIPRPKPPTKWEEFALKKGIQKRKKEKVVWDEQTNQFKRRH 124
Query: 121 GYXXXXXXXXXPIIEAKMTDEPGEDPFAKRQEEKKKRVAKQDKNRLQNLKQAAKVGALPS 180
GY PIIEAK +DEPG DPFAKR ++KKKRV KQ+KNRLQNLK A K GALPS
Sbjct: 125 GYDRVNDDNDVPIIEAKESDEPGVDPFAKRLDDKKKRVGKQEKNRLQNLKAAEKAGALPS 184
Query: 181 HVQLAATALPITGTQAAPKKFTKHELGDVXXXXXXXXXXXXKFDKKVPGEKAPKHQGKHR 240
HVQLAAT+LPI+GT+A PKK K ELGDV KFDKK+PGEK PK QGKH
Sbjct: 185 HVQLAATSLPISGTKAQPKKIGKDELGDVAGLAATSTASGGKFDKKLPGEKPPKKQGKHH 244
Query: 241 KFLPVVEGSGIGSREKEQTDKVLNKLFSKHSHEILNVEKAVTAYNVKREKKQ-----RLK 295
K+LPVV G G + EKEQT+ VL+K+FSKHSHEILNV KA+ YNVK+EKK+ +LK
Sbjct: 245 KYLPVVSGRGDVNAEKEQTNNVLSKIFSKHSHEILNVGKAINMYNVKKEKKKSGRSDKLK 304
Query: 296 HNKNVEDK 303
K++ K
Sbjct: 305 PKKDITKK 312
>ZFIN|ZDB-GENE-030131-9345 [details] [associations]
symbol:rrs1 "RRS1 ribosome biogenesis regulator
homolog (S. cerevisiae)" species:7955 "Danio rerio" [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR007023 Pfam:PF04939 ZFIN:ZDB-GENE-030131-9345
PANTHER:PTHR17602 GO:GO:0005634 GO:GO:0042254 KO:K14852 CTD:23212
HOVERGEN:HBG036121 GeneTree:ENSGT00390000005213 OMA:KRKFQPL
EMBL:BX470095 EMBL:BC055615 IPI:IPI00482247 RefSeq:NP_956356.1
UniGene:Dr.76859 STRING:Q7SX91 Ensembl:ENSDART00000125190
GeneID:337399 KEGG:dre:337399 InParanoid:Q7SX91 NextBio:20812217
Uniprot:Q7SX91
Length = 346
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 101/265 (38%), Positives = 134/265 (50%)
Query: 8 EVDLGNLLAF--NHSHHFPSLPSSREELVKECLEEGTKLVQAIADRLFNLPSTEDVDGPI 65
E D G LLAF N + RE+ ++ + T+L + + ++ LP TE VD I
Sbjct: 33 EFDPGLLLAFDKNRLDTRDFKGNKREDCLRSLARDNTQL---LINEIWKLP-TERVDEVI 88
Query: 66 VT-LPPPTTKLPRSKHLPKPKPPTKWELFAXXXXXXXXXXXXVVWDEQTGTWKRRFGYXX 124
V LP PTTKLPR K PKPKPPTKWE FA +VWDE WKRR+GY
Sbjct: 89 VAKLPEPTTKLPREKPAPKPKPPTKWEQFAKLKGIQKKKKTNLVWDEVHKEWKRRWGYKR 148
Query: 125 XXXXXXXPIIEAKMTDEPGEDPFAKRQEEKKKRVAKQDKNRLQNLKQAAKVGALPSHVQL 184
+IE T +P ED FAKR + KK+RVA+ + NRL+N+ +A KV ++
Sbjct: 149 AKDDTKEWLIEVPATADPNEDQFAKRNKAKKERVARNEYNRLKNIARAQKV-------KV 201
Query: 185 AATALPITGTQAAPKKFTKHELGDVXXXXXXXXXXXXKFDKKVPGEKAPKHQGKHRKFLP 244
T L T Q TK EL KF +K+P EK ++ GK RKF P
Sbjct: 202 PGTGLLPTSQQ------TKAELAQAVSLAKISTASVGKFQEKLPKEKPARNTGKKRKFQP 255
Query: 245 VVEGSGIGSREKEQTDKVLNKLFSK 269
++ G S EK++ +L + SK
Sbjct: 256 LI---GDFSSEKQKQLDLLKVMDSK 277
>MGI|MGI:1929721 [details] [associations]
symbol:Rrs1 "RRS1 ribosome biogenesis regulator homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0000794 "condensed
nuclear chromosome" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO;IDA] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0007080 "mitotic metaphase plate congression"
evidence=ISO] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR007023 Pfam:PF04939 MGI:MGI:1929721 PANTHER:PTHR17602
GO:GO:0005783 GO:GO:0005730 GO:GO:0042254 GO:GO:0000794
GO:GO:0007080 eggNOG:COG5225 KO:K14852 CTD:23212 HOVERGEN:HBG036121
OrthoDB:EOG444KKS GeneTree:ENSGT00390000005213 OMA:KRKFQPL
ChiTaRS:RRS1 EMBL:AB041589 EMBL:AK010178 EMBL:AK017683
EMBL:AK019257 EMBL:AK019913 EMBL:AK142041 EMBL:BC003481
EMBL:BC055925 IPI:IPI00318725 RefSeq:NP_067486.2 UniGene:Mm.29061
ProteinModelPortal:Q9CYH6 STRING:Q9CYH6 PhosphoSite:Q9CYH6
PaxDb:Q9CYH6 PRIDE:Q9CYH6 Ensembl:ENSMUST00000072079 GeneID:59014
KEGG:mmu:59014 InParanoid:Q9CYH6 NextBio:314568 Bgee:Q9CYH6
Genevestigator:Q9CYH6 GermOnline:ENSMUSG00000061024 Uniprot:Q9CYH6
Length = 365
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 98/270 (36%), Positives = 144/270 (53%)
Query: 6 QYEVDLGNLLAFNHSHHFPSL-----PSSREELVKECLEEGTKLVQAIADRLFNLPSTED 60
+ E DLGNLLA + + P++ PS EL + + T+L + ++L+ LP TE
Sbjct: 31 ELEFDLGNLLASDRNP--PTVLRQAGPSPEAEL-RALARDNTQL---LINQLWRLP-TER 83
Query: 61 VDGPIVT-LPPPTTKLPRSKHLPKPKPPTKWELFAXXXXXXXXXXXXVVWDEQTGTWKRR 119
V+ +V LP P T+LPR K LP+P+P T+W+ FA +VWDE +G W+RR
Sbjct: 84 VEEAVVARLPEPATRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEASGQWRRR 143
Query: 120 FGYXXXXXXXXXPIIEAKMTDEPGEDPFAKRQEEKKKRVAKQDKNRLQNLKQAAKVGALP 179
+GY +IE + +P ED FAKR + KK+RVAK + NRL+NL +A K+ +P
Sbjct: 144 WGYKRARDDTKEWLIEVPGSADPMEDQFAKRTQAKKERVAKNELNRLRNLARAHKM-QMP 202
Query: 180 SHVQLAATALPITGTQAAPKKFTKHELGDVXXXXXXXXXXXXKFDKKVPGEKAPKHQGKH 239
S + L TG Q+ K ELG +F +++P EKAP+ GK
Sbjct: 203 S-----SAGLHPTGHQS------KEELGRAMQVAKVSTASVGRFQERLPKEKAPRGSGKK 251
Query: 240 RKFLPVVEGSGIGSREKEQTDKVLNKLFSK 269
RKF P+ G + EK+ ++L + SK
Sbjct: 252 RKFQPLF---GDFAAEKKNQLELLRVMNSK 278
>UNIPROTKB|F1RTZ0 [details] [associations]
symbol:RRS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007080 "mitotic metaphase plate congression"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] InterPro:IPR007023 Pfam:PF04939 PANTHER:PTHR17602
GO:GO:0005783 GO:GO:0005730 GO:GO:0042254 GO:GO:0000794
GO:GO:0007080 GeneTree:ENSGT00390000005213 OMA:KRKFQPL
EMBL:CU855750 Ensembl:ENSSSCT00000006810 Uniprot:F1RTZ0
Length = 372
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 100/270 (37%), Positives = 144/270 (53%)
Query: 6 QYEVDLGNLLAFNHS-----HHFPSLPSSREELVKECLEEGTKLVQAIADRLFNLPSTED 60
+ E DLGNLLA + + H + P+ EL + + T+L + ++L+ LP TE
Sbjct: 38 ELEFDLGNLLASDRNPPTGLRH--AGPTKEAEL-RALARDNTQL---LINQLWQLP-TER 90
Query: 61 VDGPIVT-LPPPTTKLPRSKHLPKPKPPTKWELFAXXXXXXXXXXXXVVWDEQTGTWKRR 119
V+ +V LP PTT+LPR K +P+P+P T+W+ FA +VWDE +G W+RR
Sbjct: 91 VEETLVARLPEPTTRLPREKPVPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRRR 150
Query: 120 FGYXXXXXXXXXPIIEAKMTDEPGEDPFAKRQEEKKKRVAKQDKNRLQNLKQAAKVGALP 179
+GY +IE +P ED FAKR + KK+RVAK + NRL+NL +A K+ LP
Sbjct: 151 WGYQRARDDTKEWLIEVPSNADPMEDQFAKRIQAKKERVAKNELNRLRNLARAHKM-QLP 209
Query: 180 SHVQLAATALPITGTQAAPKKFTKHELGDVXXXXXXXXXXXXKFDKKVPGEKAPKHQGKH 239
S AA P TG Q+ K ELG +F +++P EKAP+ GK
Sbjct: 210 S----AAGMHP-TGHQS------KEELGRAMQVAKVSTASVGRFQERLPKEKAPRGSGKK 258
Query: 240 RKFLPVVEGSGIGSREKEQTDKVLNKLFSK 269
RKF P+ G + EK+ ++L + SK
Sbjct: 259 RKFQPLF---GDFAAEKKSQLEMLRVMNSK 285
>RGD|1311403 [details] [associations]
symbol:Rrs1 "RRS1 ribosome biogenesis regulator homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000794
"condensed nuclear chromosome" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005783
"endoplasmic reticulum" evidence=IEA;ISO] [GO:0007080 "mitotic
metaphase plate congression" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0042254 "ribosome biogenesis"
evidence=IEA] InterPro:IPR007023 Pfam:PF04939 RGD:1311403
PANTHER:PTHR17602 GO:GO:0005730 GO:GO:0042254 eggNOG:COG5225
HOGENOM:HOG000017552 KO:K14852 CTD:23212 HOVERGEN:HBG036121
OrthoDB:EOG444KKS GeneTree:ENSGT00390000005213 OMA:KRKFQPL
EMBL:BC128746 IPI:IPI00191512 RefSeq:NP_001073167.1
UniGene:Rn.228976 STRING:A1A5P2 PRIDE:A1A5P2
Ensembl:ENSRNOT00000009482 GeneID:297784 KEGG:rno:297784
UCSC:RGD:1311403 InParanoid:A1A5P2 NextBio:642650
Genevestigator:A1A5P2 Uniprot:A1A5P2
Length = 365
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 98/270 (36%), Positives = 143/270 (52%)
Query: 6 QYEVDLGNLLAFNHSHHFPSL-----PSSREELVKECLEEGTKLVQAIADRLFNLPSTED 60
+ E DLGNLLA + + P++ PS EL + + T+L + ++L+ LP TE
Sbjct: 31 ELEFDLGNLLASDRNP--PTVLRQAGPSPEAEL-RALARDNTQL---LVNQLWQLP-TER 83
Query: 61 VDGPIVT-LPPPTTKLPRSKHLPKPKPPTKWELFAXXXXXXXXXXXXVVWDEQTGTWKRR 119
V+ +V LP P T+LPR K LP+P+P T+W+ FA +VWDE +G W+RR
Sbjct: 84 VEEAVVARLPEPATRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRRR 143
Query: 120 FGYXXXXXXXXXPIIEAKMTDEPGEDPFAKRQEEKKKRVAKQDKNRLQNLKQAAKVGALP 179
+GY +IE + +P ED FAKR KK+RVAK + NRL+NL +A K+ +P
Sbjct: 144 WGYKRARDDTKEWLIEVPGSADPMEDQFAKRIRAKKERVAKNELNRLRNLARAHKM-QMP 202
Query: 180 SHVQLAATALPITGTQAAPKKFTKHELGDVXXXXXXXXXXXXKFDKKVPGEKAPKHQGKH 239
S + L TG Q+ K ELG +F +++P EKAP+ GK
Sbjct: 203 S-----SAGLHPTGHQS------KEELGRAMQVAKVSTASVGRFQERLPKEKAPRGSGKK 251
Query: 240 RKFLPVVEGSGIGSREKEQTDKVLNKLFSK 269
RKF P+ G + EK+ ++L + SK
Sbjct: 252 RKFQPLF---GDFAAEKKNQLELLRVMNSK 278
>UNIPROTKB|F1PRD1 [details] [associations]
symbol:RRS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007080 "mitotic metaphase plate congression"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] InterPro:IPR007023 Pfam:PF04939 PANTHER:PTHR17602
GO:GO:0005783 GO:GO:0005730 GO:GO:0042254 GO:GO:0000794
GO:GO:0007080 KO:K14852 CTD:23212 GeneTree:ENSGT00390000005213
OMA:KRKFQPL EMBL:AAEX03015838 RefSeq:XP_544107.1
Ensembl:ENSCAFT00000011706 GeneID:486978 KEGG:cfa:486978
Uniprot:F1PRD1
Length = 365
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 100/268 (37%), Positives = 143/268 (53%)
Query: 6 QYEVDLGNLLAFNHSHHFP---SLPSSREELVKECLEEGTKLVQAIADRLFNLPSTEDVD 62
+ E DLGNLLA + + + PS EL + + T+L + ++L+ LP TE V+
Sbjct: 31 ELEFDLGNLLASDPNPPAGLRRAGPSPEAEL-QALARDNTQL---LINQLWQLP-TERVE 85
Query: 63 GPIVT-LPPPTTKLPRSKHLPKPKPPTKWELFAXXXXXXXXXXXXVVWDEQTGTWKRRFG 121
+V LP PTT+LPR K +P+P+P T+W+ FA +VWDE +G W+RR+G
Sbjct: 86 EALVARLPEPTTRLPREKPVPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRRRWG 145
Query: 122 YXXXXXXXXXPIIEAKMTDEPGEDPFAKRQEEKKKRVAKQDKNRLQNLKQAAKVGALPSH 181
Y +IE +P ED FAKR + KK+RVAK + NRL+NL +A K+ LPS
Sbjct: 146 YQRARDDTKEWLIEVPGGADPLEDQFAKRIQAKKERVAKNELNRLRNLARAHKM-QLPS- 203
Query: 182 VQLAATALPITGTQAAPKKFTKHELGDVXXXXXXXXXXXXKFDKKVPGEKAPKHQGKHRK 241
AA P TG Q+ K ELG +F +++P EKAP+ GK RK
Sbjct: 204 ---AAGMHP-TGHQS------KEELGRAMQVAKVSTASVGRFQERLPKEKAPRSSGKKRK 253
Query: 242 FLPVVEGSGIGSREKEQTDKVLNKLFSK 269
F P+ G + EK+ ++L + SK
Sbjct: 254 FQPLF---GDFAAEKKSQLEMLRVMNSK 278
>UNIPROTKB|Q15050 [details] [associations]
symbol:RRS1 "Ribosome biogenesis regulatory protein
homolog" species:9606 "Homo sapiens" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0000794
"condensed nuclear chromosome" evidence=IDA] [GO:0007080 "mitotic
metaphase plate congression" evidence=IMP] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR007023 Pfam:PF04939
PANTHER:PTHR17602 GO:GO:0005783 GO:GO:0005730 GO:GO:0042254
GO:GO:0000794 GO:GO:0007080 eggNOG:COG5225 HOGENOM:HOG000017552
KO:K14852 CTD:23212 HOVERGEN:HBG036121 OrthoDB:EOG444KKS
OMA:KRKFQPL EMBL:D25218 EMBL:BC001811 EMBL:BC013043 IPI:IPI00014253
RefSeq:NP_055984.1 UniGene:Hs.71827 ProteinModelPortal:Q15050
IntAct:Q15050 MINT:MINT-1485279 STRING:Q15050 PhosphoSite:Q15050
DMDM:21431847 SWISS-2DPAGE:Q15050 PaxDb:Q15050 PeptideAtlas:Q15050
PRIDE:Q15050 DNASU:23212 Ensembl:ENST00000320270 GeneID:23212
KEGG:hsa:23212 UCSC:uc003xwa.3 GeneCards:GC08P067341
HGNC:HGNC:17083 neXtProt:NX_Q15050 PharmGKB:PA134993138
InParanoid:Q15050 ChiTaRS:RRS1 GenomeRNAi:23212 NextBio:44767
Bgee:Q15050 CleanEx:HS_RRS1 Genevestigator:Q15050
GermOnline:ENSG00000179041 Uniprot:Q15050
Length = 365
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 98/268 (36%), Positives = 141/268 (52%)
Query: 6 QYEVDLGNLLAFNHSHHFP---SLPSSREELVKECLEEGTKLVQAIADRLFNLPSTEDVD 62
+ + DLGNLLA + + + P+ EL + + T+L + ++L+ LP TE V+
Sbjct: 31 ELQFDLGNLLASDRNPPTGLRCAGPTPEAEL-QALARDNTQL---LINQLWQLP-TERVE 85
Query: 63 GPIVT-LPPPTTKLPRSKHLPKPKPPTKWELFAXXXXXXXXXXXXVVWDEQTGTWKRRFG 121
IV LP PTT+LPR K LP+P+P T+W+ FA +VWDE +G W+RR+G
Sbjct: 86 EAIVARLPEPTTRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRRRWG 145
Query: 122 YXXXXXXXXXPIIEAKMTDEPGEDPFAKRQEEKKKRVAKQDKNRLQNLKQAAKVGALPSH 181
Y +IE +P ED FAKR + KK+RVAK + NRL+NL +A K+ LPS
Sbjct: 146 YQRARDDTKEWLIEVPGNADPLEDQFAKRIQAKKERVAKNELNRLRNLARAHKM-QLPS- 203
Query: 182 VQLAATALPITGTQAAPKKFTKHELGDVXXXXXXXXXXXXKFDKKVPGEKAPKHQGKHRK 241
A L TG Q+ K ELG +F +++P EK P+ GK RK
Sbjct: 204 ----AAGLHPTGHQS------KEELGRAMQVAKVSTASVGRFQERLPKEKVPRGSGKKRK 253
Query: 242 FLPVVEGSGIGSREKEQTDKVLNKLFSK 269
F P+ G + EK+ ++L + SK
Sbjct: 254 FQPLF---GDFAAEKKNQLELLRVMNSK 278
>UNIPROTKB|F1MPT7 [details] [associations]
symbol:RRS1 "Ribosome biogenesis regulatory protein
homolog" species:9913 "Bos taurus" [GO:0007080 "mitotic metaphase
plate congression" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR007023
Pfam:PF04939 PANTHER:PTHR17602 GO:GO:0005783 GO:GO:0005730
GO:GO:0042254 GO:GO:0000794 GO:GO:0007080 IPI:IPI00714645
UniGene:Bt.24869 GeneTree:ENSGT00390000005213 OMA:KRKFQPL
EMBL:DAAA02038676 Ensembl:ENSBTAT00000022217 Uniprot:F1MPT7
Length = 365
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 97/267 (36%), Positives = 141/267 (52%)
Query: 6 QYEVDLGNLLAFNHS-----HHFPSLPSSREELVKECLEEGTKLVQAIADRLFNLPSTED 60
+ E DLGNLLA + + H + P+ EL + + T+L + ++L+ LP TE
Sbjct: 31 ELEFDLGNLLASDRNPPTGLRH--AGPTQEAEL-RALARDNTQL---LINQLWQLP-TER 83
Query: 61 VDGPIVT-LPPPTTKLPRSKHLPKPKPPTKWELFAXXXXXXXXXXXXVVWDEQTGTWKRR 119
V+ +V LP P+T+LPR K +P+P+P T+W+ FA +VWDE +G W+RR
Sbjct: 84 VEEALVARLPEPSTRLPREKPVPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRRR 143
Query: 120 FGYXXXXXXXXXPIIEAKMTDEPGEDPFAKRQEEKKKRVAKQDKNRLQNLKQAAKVGALP 179
+GY +IE +P ED FAKR + KK+RVAK + NRL+NL +A K+ LP
Sbjct: 144 WGYQRARDDTKEWLIEVPGNADPMEDQFAKRIQAKKERVAKNELNRLRNLARAHKM-QLP 202
Query: 180 SHVQLAATALPITGTQAAPKKFTKHELGDVXXXXXXXXXXXXKFDKKVPGEKAPKHQGKH 239
S AA P TG Q+ K ELG +F +++P EKAP+ GK
Sbjct: 203 S----AAGMHP-TGHQS------KEELGRAMQVAKVSTASVGRFQERLPKEKAPRGSGKK 251
Query: 240 RKFLPVVEGSGIGSREKEQTD--KVLN 264
RKF P+ + K Q + +V+N
Sbjct: 252 RKFQPLF--GDFAAERKSQLEMLRVMN 276
>UNIPROTKB|Q2KIH4 [details] [associations]
symbol:RRS1 "Ribosome biogenesis regulatory protein
homolog" species:9913 "Bos taurus" [GO:0005730 "nucleolus"
evidence=ISS] [GO:0007080 "mitotic metaphase plate congression"
evidence=ISS] [GO:0000794 "condensed nuclear chromosome"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR007023 Pfam:PF04939 PANTHER:PTHR17602 GO:GO:0005730
GO:GO:0042254 GO:GO:0000794 GO:GO:0007080 eggNOG:COG5225
HOGENOM:HOG000017552 KO:K14852 EMBL:BC112636 IPI:IPI00714645
RefSeq:NP_001068949.1 UniGene:Bt.24869 STRING:Q2KIH4 PRIDE:Q2KIH4
GeneID:510956 KEGG:bta:510956 CTD:23212 HOVERGEN:HBG036121
InParanoid:Q2KIH4 OrthoDB:EOG444KKS NextBio:20869700 Uniprot:Q2KIH4
Length = 365
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 97/267 (36%), Positives = 141/267 (52%)
Query: 6 QYEVDLGNLLAFNHS-----HHFPSLPSSREELVKECLEEGTKLVQAIADRLFNLPSTED 60
+ E DLGNLLA + + H + P+ EL + + T+L + ++L+ LP TE
Sbjct: 31 ELEFDLGNLLASDRNPPTGLRH--AGPTQEAEL-RALARDNTQL---LINQLWQLP-TER 83
Query: 61 VDGPIVT-LPPPTTKLPRSKHLPKPKPPTKWELFAXXXXXXXXXXXXVVWDEQTGTWKRR 119
V+ +V LP P+T+LPR K +P+P+P T+W+ FA +VWDE +G W+RR
Sbjct: 84 VEEALVARLPEPSTRLPREKPVPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGRWRRR 143
Query: 120 FGYXXXXXXXXXPIIEAKMTDEPGEDPFAKRQEEKKKRVAKQDKNRLQNLKQAAKVGALP 179
+GY +IE +P ED FAKR + KK+RVAK + NRL+NL +A K+ LP
Sbjct: 144 WGYQRARDDTKEWLIEVPGNADPMEDQFAKRIQAKKERVAKNELNRLRNLARAHKM-QLP 202
Query: 180 SHVQLAATALPITGTQAAPKKFTKHELGDVXXXXXXXXXXXXKFDKKVPGEKAPKHQGKH 239
S AA P TG Q+ K ELG +F +++P EKAP+ GK
Sbjct: 203 S----AAGMHP-TGHQS------KEELGRAMQVAKVSTASVGRFQERLPKEKAPRGSGKK 251
Query: 240 RKFLPVVEGSGIGSREKEQTD--KVLN 264
RKF P+ + K Q + +V+N
Sbjct: 252 RKFQPLF--GDFAAERKSQLEMLRVMN 276
>DICTYBASE|DDB_G0274521 [details] [associations]
symbol:rrs1 "ribosome biogenesis regulatory protein"
species:44689 "Dictyostelium discoideum" [GO:0042254 "ribosome
biogenesis" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0030687 "preribosome, large subunit precursor" evidence=ISS]
InterPro:IPR007023 Pfam:PF04939 dictyBase:DDB_G0274521
PANTHER:PTHR17602 GO:GO:0005634 GenomeReviews:CM000151_GR
GO:GO:0042254 EMBL:AAFI02000012 GO:GO:0030687 eggNOG:COG5225
KO:K14852 OMA:KRKFQPL RefSeq:XP_644082.1 STRING:Q869Q2
EnsemblProtists:DDB0304994 GeneID:8619511 KEGG:ddi:DDB_G0274521
ProtClustDB:CLSZ2729207 Uniprot:Q869Q2
Length = 317
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 89/292 (30%), Positives = 143/292 (48%)
Query: 10 DLGNLLAFNHSH-HFPSLPSSREELVKECLEEGTKLVQAIADRLFNLPSTEDVDGPIVTL 68
DLGNL AF+HS + S+ E + + + VQ + RLF LP E +G + L
Sbjct: 30 DLGNLTAFDHSSLNKTEYKSNPNEYINKLSRDN---VQLLISRLFQLPIKEIEEGSLALL 86
Query: 69 PPPTTKLPRSKHLPKPKPPTKWELFAXXXXXXXXXXXXVVWDEQTGTWKRRFGYXXXXXX 128
P TT +PR + LP KP T+WE FA + WD++ ++ FGY
Sbjct: 87 PRCTTPIPRERSLPTSKPKTRWEAFAEIKGIKKKKKSSMEWDKEHEEYRPTFGYKKANDV 146
Query: 129 XXXPIIEAKMTDEPGEDPFAKRQEEKKKRVAKQDKNRLQNLKQAAKVGALPSHVQLAATA 188
+ A+ D+ GEDPF K ++EK RV+KQ K +N +A S Q++
Sbjct: 147 ANDWAMLARPDDKVGEDPFKKLEDEKNDRVSKQKKREQRNFDEA-------SMRQMSNVG 199
Query: 189 LPITGTQAAPKKFTKHELGDVXXXXXXXXXXXXKFDKKVPGEK-APKHQGKHRKFLPVVE 247
++ + + K ++ V KFDK+V EK APK +GK +K +
Sbjct: 200 KTLSFDKEHRGQI-KSDMEKVFDVAKLSTASLGKFDKRVENEKDAPK-RGK-KKLAGL-- 254
Query: 248 GSGIGSREKEQTDKVLNKLFSKHSHEILNVEKAVTAYNVKREKKQRLKHNKN 299
G+G ++E E K+++++F K + +LNV+KA + VK E+++ ++
Sbjct: 255 GAGDVAQESENNSKLIDRMFKKEN--VLNVDKATRQF-VKAEERENYSKKRS 303
>WB|WBGene00007617 [details] [associations]
symbol:rrbs-1 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040019 "positive regulation of
embryonic development" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0016477 "cell
migration" evidence=IMP] InterPro:IPR007023 Pfam:PF04939
PANTHER:PTHR17602 GO:GO:0005634 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0016477 GO:GO:0008406 GO:GO:0002119
GO:GO:0042254 GO:GO:0040019 EMBL:Z81035 eggNOG:COG5225
HOGENOM:HOG000017552 KO:K14852 PIR:T19313 RefSeq:NP_506573.1
ProteinModelPortal:Q9XVT0 DIP:DIP-24987N MINT:MINT-1119887
STRING:Q9XVT0 PaxDb:Q9XVT0 EnsemblMetazoa:C15H11.9.1
EnsemblMetazoa:C15H11.9.2 GeneID:179942 KEGG:cel:CELE_C15H11.9
UCSC:C15H11.9.1 CTD:179942 WormBase:C15H11.9
GeneTree:ENSGT00390000005213 InParanoid:Q9XVT0 OMA:KRKFQPL
NextBio:907486 Uniprot:Q9XVT0
Length = 333
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 93/297 (31%), Positives = 140/297 (47%)
Query: 9 VDLGNLLAFNHSHHFPSLPSSREELVKECLEEGTKLVQAIADRLFNLPSTEDVDGPIVTL 68
+DLGNLL + P + E L E K Q + + ++ L + IVTL
Sbjct: 16 IDLGNLLFIDRE---PIQGDASEGLE----ERARKNTQLLFNNIWQLEQKRVEEAIIVTL 68
Query: 69 PPPTTKLPRSKHLPKPKPPTKWELFAXXXXXXXXXXXXVVWDEQTGTWKRRFGYXXXXXX 128
PP T +LPR K LP+ K PTKWE +A V+DE T WK +GY
Sbjct: 69 PPATYRLPREKRLPEKKEPTKWEKYAAEKGIEKRKKDKKVFDEATKEWKPTYGYRRGNDD 128
Query: 129 XXXPIIEAK-MTDEPGEDPFAKRQEEKKKRVAKQDKNRLQNLKQAAKVGALPSHVQLAAT 187
+IE ++P +D FA+R+E+KK+RVAK D R++NL + K + V+ +
Sbjct: 129 TKDWLIEIPDNAEDPNKDFFAERREKKKERVAKNDMQRMKNLARQMK-----TTVKSGPS 183
Query: 188 ALPITGTQAAPKKFTKHELGDVXXXXXXXXXXXXKFDKKVPGEKAPKHQGKHRKFLPVVE 247
+ G K+ +K ++ KF + + GEKA GK RKF E
Sbjct: 184 TEKMIGVGVDAKEKSKQQVRFAVDRAKLATASAGKFQEGLKGEKANVKTGKKRKF-EANE 242
Query: 248 GSGIGSREKEQTDKVLNKLFSKHSHEILNVEKAVTAYNVKREKKQRLKHNKNVEDKS 304
G EKE+ ++L ++ SK + +I+ EKA REKK++ K +D++
Sbjct: 243 APVSG--EKERALQILQRMKSKKA-KIVE-EKAAAVAGPLREKKEK-SERKGAKDQT 294
>FB|FBgn0052409 [details] [associations]
symbol:CG32409 species:7227 "Drosophila melanogaster"
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR007023 Pfam:PF04939
PANTHER:PTHR17602 GO:GO:0005634 GO:GO:0042254 FlyBase:FBgn0052409
EMBL:AY122167 STRING:Q8MR24 PRIDE:Q8MR24 InParanoid:Q8MR24
ArrayExpress:Q8MR24 Bgee:Q8MR24 Uniprot:Q8MR24
Length = 361
Score = 211 (79.3 bits), Expect = 7.2e-17, P = 7.2e-17
Identities = 80/309 (25%), Positives = 134/309 (43%)
Query: 1 MESQNQYEVDLGNLLAFN-HSHHFPSLPSSREELVKECLEEGTKLVQAIADRLFNLPSTE 59
+E + +D+G+LL + + L ++EE + E T+L + + ++ LP TE
Sbjct: 35 VEKHLECRLDVGSLLITDPNDFDDRELRDNKEEYLTALTRENTQL---LVNAIWELP-TE 90
Query: 60 DVDGPIVT-LPPPTTKLPRSKHLPKPKPPTKWELFAXXXXXXXXXXXXVVWDEQTGTWKR 118
VD IV LP PTT LPR + P P+P TKWE FA +DE W
Sbjct: 91 RVDESIVAKLPEPTTVLPRLRKPPGPRPLTKWEKFAKEKGISKKKKDKKTYDETMDKWVP 150
Query: 119 RFGYXXXXXXXXXP-IIEAKMTDEPGEDPFAKRQEEKKKRVAKQDKNRLQNLKQAAKVGA 177
+G+ ++E +P D F K+ + + ++VAK + R++N+ +A K+
Sbjct: 151 TYGFKRAEAEKAKDWVLEVPQNADPNTDMFQKKIDLRNEKVAKNEIQRMKNIVRAKKID- 209
Query: 178 LPSHVQLAATALPITGTQAAPKKFTKHELGDVXXXXXXXXXXXXKFDKKVPGEKAPKHQG 237
+P +G P+ + +L KF K+P EK + G
Sbjct: 210 -----------MPRSG-YLGPEAASSSQLLTAVTVAKSSTASVGKFQNKLPKEKEARGLG 257
Query: 238 KHRKFLP--VVEGSGIGSR-EKEQTDKVLNKLFSKHSHEILNVEKAVTAYNVKREKKQRL 294
++ +P + S I EKE ++ + +K L+V KAV+ KR+ RL
Sbjct: 258 I-KELIPGGKRKQSHITQTPEKEANLDLIKSVLNKKPK--LDVSKAVSME--KRDN--RL 310
Query: 295 KHNKNVEDK 303
E++
Sbjct: 311 AREAEAENE 319
>SGD|S000005820 [details] [associations]
symbol:RRS1 "Essential protein that binds ribosomal protein
L11" species:4932 "Saccharomyces cerevisiae" [GO:0034399 "nuclear
periphery" evidence=IDA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0042273
"ribosomal large subunit biogenesis" evidence=IMP] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000055 "ribosomal large
subunit export from nucleus" evidence=IMP] InterPro:IPR007023
Pfam:PF04939 SGD:S000005820 PANTHER:PTHR17602 GO:GO:0005654
GO:GO:0005730 EMBL:BK006948 GO:GO:0042273 GO:GO:0030687
GO:GO:0034399 GO:GO:0000055 GO:GO:0000447 eggNOG:COG5225 KO:K14852
GeneTree:ENSGT00390000005213 HOGENOM:HOG000180297 OrthoDB:EOG4WWVV5
EMBL:Z75202 PIR:S67198 RefSeq:NP_014937.1 ProteinModelPortal:Q08746
DIP:DIP-4081N IntAct:Q08746 MINT:MINT-484080 STRING:Q08746
PaxDb:Q08746 PeptideAtlas:Q08746 EnsemblFungi:YOR294W GeneID:854469
KEGG:sce:YOR294W CYGD:YOR294w OMA:HKRNLKN NextBio:976762
Genevestigator:Q08746 GermOnline:YOR294W Uniprot:Q08746
Length = 203
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 61/184 (33%), Positives = 89/184 (48%)
Query: 10 DLGNLLAFNHS----HHFPSLPSSREELVKECLEEGTKLVQAIADRLFNLP---STEDVD 62
DLGNL AF+ + + S + REE +K + VQ + ++L +LP +TE V
Sbjct: 22 DLGNLAAFDSNVLDKNDLDSSNARREEKIKSLTRDN---VQLLINQLLSLPMKTTTESVG 78
Query: 63 GP-----IVTL---PPPTTKLPRSKHLPKPKPPTKWELFAXXXXXX-XXXXXXVVWDEQT 113
G ++TL P PTT LPR K LPK K TKWE FA +++DE +
Sbjct: 79 GTGGQSSVMTLLQLPDPTTDLPREKPLPKAKAMTKWEKFAAKKGIKPKERAGKMIYDEAS 138
Query: 114 GTWKRRFGYXXXXXXXXXP-IIEA----KMTDEPGEDPFAKRQEEKKKRVAKQDKNRLQN 168
G W ++GY ++E K TD DP + E+K+ V K +K + +N
Sbjct: 139 GEWVPKWGYKGANKKLDDQWLVEVDDKVKGTDNELIDPRTLNRAERKRLVKKNEKQQRRN 198
Query: 169 LKQA 172
+K A
Sbjct: 199 MKNA 202
>ASPGD|ASPL0000010989 [details] [associations]
symbol:AN3745 species:162425 "Emericella nidulans"
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0034399 "nuclear
periphery" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR007023
Pfam:PF04939 PANTHER:PTHR17602 GO:GO:0005634 GO:GO:0042254
EMBL:BN001302 EMBL:AACD01000061 eggNOG:COG5225 KO:K14852
HOGENOM:HOG000180297 OrthoDB:EOG4WWVV5 RefSeq:XP_661349.1
STRING:Q5B6T5 EnsemblFungi:CADANIAT00004978 GeneID:2873169
KEGG:ani:AN3745.2 OMA:KMRANER Uniprot:Q5B6T5
Length = 218
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 56/176 (31%), Positives = 80/176 (45%)
Query: 7 YEVDLGNLLAFNHSHHFPSLPSSR--EELVKECLEEGTKLVQAIADRLFNL-PSTEDVDG 63
Y DLG+LLA N + LP S +K +G VQ++ ++L P T G
Sbjct: 29 YTFDLGHLLA-NDPNPL-ELPKSEPLNASLKATARDG---VQSLLNQLLTTCPITSSQQG 83
Query: 64 PIVTLPPPTTKLPRSKHLPKPKPPTKWELFAX------------XXXXXXXXXXXVVWDE 111
++TLP P+T LPR K LP PKPPTKWELFA +V+DE
Sbjct: 84 VLLTLPAPSTILPRHKPLPTPKPPTKWELFARKKGIGKYSNKPGAALADKERRKKLVYDE 143
Query: 112 QTGTWKRRFGYXXXXXXXXXPIIEAKMTDEPGEDPFAKRQEEKKKRVAKQDKNRLQ 167
++G W R+GY ++E K D E+ A + + + K R++
Sbjct: 144 ESGEWVPRWGYKGKNKDDDQWLVEVKEKDWKKEEEAAAKGSSIRGMSRAERKERIR 199
>POMBASE|SPBC29A3.16 [details] [associations]
symbol:rrs1 "ribosome biogenesis protein Rrs1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0006364
"rRNA processing" evidence=ISO] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR007023 Pfam:PF04939 PomBase:SPBC29A3.16
PANTHER:PTHR17602 GO:GO:0005730 EMBL:CU329671 GO:GO:0006364
eggNOG:COG5225 KO:K14852 PIR:T40087 RefSeq:NP_595844.1
IntAct:O59678 STRING:O59678 PRIDE:O59678 EnsemblFungi:SPBC29A3.16.1
GeneID:2540324 KEGG:spo:SPBC29A3.16 HOGENOM:HOG000180297
OMA:TRARREK OrthoDB:EOG4WWVV5 NextBio:20801453 Uniprot:O59678
Length = 166
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 53/176 (30%), Positives = 84/176 (47%)
Query: 1 MESQNQYEVDLGNLLAFNHSH-HFPSLPSSREELVKECLEEGTKLVQAIADRLFNLPSTE 59
+E+ + DLGN+ AF+ S L S +E L VQ + +++ +LP
Sbjct: 5 IENSIPLDFDLGNMAAFDISPLDETKLSGSEKESFLFSLSRDN--VQQLVNKMISLPKER 62
Query: 60 DVDGPIVTLPPPTTKLPRSKHLPKPKPPTKWELFAXXXXXX-XXXXXXVVWDEQTGTWKR 118
DG ++ LP T LPR+K LPKPKP TKW+ FA +V+DE +G W
Sbjct: 63 TSDGVLLQLPETVTPLPRAKPLPKPKPETKWQRFARIKGIAPKKREGRLVFDEASGEWVP 122
Query: 119 RFGYXXXXXXXXXPIIEAKMTDEPGEDPFAKRQEEKKKRVAKQDKNRLQNLKQAAK 174
++GY +E + E GE ++KK +KQ +N + +K++ +
Sbjct: 123 KWGYKGKNKE-----LETQWLVEEGE--------KEKKLTSKQVRNTSKKIKRSRR 165
>CGD|CAL0005046 [details] [associations]
symbol:RRS1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0035690 "cellular response to
drug" evidence=IMP] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0034399 "nuclear periphery" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=IEA] [GO:0000447 "endonucleolytic
cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] InterPro:IPR007023 Pfam:PF04939 CGD:CAL0005046
PANTHER:PTHR17602 GO:GO:0005634 GO:GO:0042254 GO:GO:0035690
EMBL:AACQ01000035 KO:K14852 RefSeq:XP_718976.1 STRING:Q5ABR3
GeneID:3639352 KEGG:cal:CaO19.6014 Uniprot:Q5ABR3
Length = 205
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 58/190 (30%), Positives = 90/190 (47%)
Query: 5 NQYEVDLGNLLAFNHSHHFPSLPSSREELVKEC-LEEGTK-LVQAIADRLFNLPS--TED 60
N Y DLGNL F+ + S++E +KE L+ T+ VQ + +++ +LP T +
Sbjct: 18 NTY--DLGNLATFDPNPLDNEKLLSKDESIKEDHLQSVTRDNVQLLINQILSLPVKITTE 75
Query: 61 VDGP---------IVTLPPPTTKLPRSKHLPKPKPPTKWELFAXXXXXX-XXXXXXVVWD 110
G ++ LP PTT LPR K +PK KP TKW+ FA +V+D
Sbjct: 76 THGSSTGQNSTMTLIQLPEPTTILPREKPIPKAKPLTKWQQFAARKGIKPKAKDGKMVYD 135
Query: 111 EQTGTWKRRFGYXXXXXXXXXP-IIEA----KMTDEPGEDPFAKRQEEKKKRVAKQDKNR 165
E TG W ++GY ++E K T++ DP ++ E+KK + K +
Sbjct: 136 EDTGEWVPKWGYKGKNKSIDDQWLVEVDDKVKNTEDELIDPRTLKRAERKKLIKKNELQH 195
Query: 166 LQNLKQAAKV 175
+NL+ V
Sbjct: 196 KRNLRNQGAV 205
>UNIPROTKB|Q5ABR3 [details] [associations]
symbol:RRS1 "Likely ribosome biogenesis regulatory protein
Rrs1p" species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0035690 "cellular response to
drug" evidence=IMP] InterPro:IPR007023 Pfam:PF04939 CGD:CAL0005046
PANTHER:PTHR17602 GO:GO:0005634 GO:GO:0042254 GO:GO:0035690
EMBL:AACQ01000035 KO:K14852 RefSeq:XP_718976.1 STRING:Q5ABR3
GeneID:3639352 KEGG:cal:CaO19.6014 Uniprot:Q5ABR3
Length = 205
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 58/190 (30%), Positives = 90/190 (47%)
Query: 5 NQYEVDLGNLLAFNHSHHFPSLPSSREELVKEC-LEEGTK-LVQAIADRLFNLPS--TED 60
N Y DLGNL F+ + S++E +KE L+ T+ VQ + +++ +LP T +
Sbjct: 18 NTY--DLGNLATFDPNPLDNEKLLSKDESIKEDHLQSVTRDNVQLLINQILSLPVKITTE 75
Query: 61 VDGP---------IVTLPPPTTKLPRSKHLPKPKPPTKWELFAXXXXXX-XXXXXXVVWD 110
G ++ LP PTT LPR K +PK KP TKW+ FA +V+D
Sbjct: 76 THGSSTGQNSTMTLIQLPEPTTILPREKPIPKAKPLTKWQQFAARKGIKPKAKDGKMVYD 135
Query: 111 EQTGTWKRRFGYXXXXXXXXXP-IIEA----KMTDEPGEDPFAKRQEEKKKRVAKQDKNR 165
E TG W ++GY ++E K T++ DP ++ E+KK + K +
Sbjct: 136 EDTGEWVPKWGYKGKNKSIDDQWLVEVDDKVKNTEDELIDPRTLKRAERKKLIKKNELQH 195
Query: 166 LQNLKQAAKV 175
+NL+ V
Sbjct: 196 KRNLRNQGAV 205
>UNIPROTKB|G4MQQ2 [details] [associations]
symbol:MGG_09302 "Ribosome biogenesis protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR007023 Pfam:PF04939
PANTHER:PTHR17602 GO:GO:0005634 GO:GO:0042254 EMBL:CM001231
KO:K14852 RefSeq:XP_003709951.1 EnsemblFungi:MGG_09302T0
GeneID:2680165 KEGG:mgr:MGG_09302 Uniprot:G4MQQ2
Length = 193
Score = 144 (55.7 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 49/179 (27%), Positives = 77/179 (43%)
Query: 7 YEVDLGNLLAFNHSHHFPSLPSSREELVKECLEEGTKLVQAIADRLFNL-PSTEDVDGPI 65
Y DL LLA N + + E + +G QA+ ++L P G +
Sbjct: 20 YSFDLALLLA-NDPNPVELDKTDLEGSLSSLARDGA---QALINQLLTTCPIQSTPSGVL 75
Query: 66 VTLPPPTTKLPRSKHLPKPKPPTKWELFAXXXXX---XXXXXXXVVWDEQTGTWKRRFGY 122
++LP T LPR K LP K PTKWE FA + ++E+ G W+R++GY
Sbjct: 76 LSLPAQQTALPREKPLPAAKEPTKWERFAAKKGIKPKTREQRRNIQYNEEKGEWERKWGY 135
Query: 123 XXXXXXXXX-------PIIEAKMTDEPGEDPFAKRQEEKKKRVAKQDKNRLQNLKQAAK 174
P EAK+ + GE + + E+ +R + ++ +N + AAK
Sbjct: 136 KGANKQLEKDWLVEVDPAKEAKLKE--GETLRGQTRRERVERQKRNERKMRKNERDAAK 192
>UNIPROTKB|F1LZ13 [details] [associations]
symbol:F1LZ13 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR007023 Pfam:PF04939
PANTHER:PTHR17602 GO:GO:0005634 GO:GO:0042254 IPI:IPI00778086
Ensembl:ENSRNOT00000061441 Uniprot:F1LZ13
Length = 260
Score = 148 (57.2 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 51/197 (25%), Positives = 80/197 (40%)
Query: 68 LPPPTTKLPRSKHLPKPKPPTKWELFAXXXXXXXXXXXXVVWDEQTGTWKRRFGYXXXXX 127
L P T LP+ K L +P T ++ F ++ D+ + W+ GY
Sbjct: 8 LQQPATHLPQEKPLHQPLLLTHFQQFECLKGISPKKRKNILCDKVSSQWQSCCGYKLVQD 67
Query: 128 XXXXPIIEAKMTDEPGEDPFAKRQEEKKKRVAKQDKNRLQNLKQAAKVGALPSHVQLAAT 187
+IE + +P ED F KR + ++ +AK + N LQNL K+ +PS L
Sbjct: 68 DTKEWLIEVPGSADPMEDQFTKRIQANRELMAKNELNHLQNLVHVHKM-QMPSSASLM-- 124
Query: 188 ALPITGTQAAPKKFTKHELGDVXXXXXXXXXXXXKFDKKVPGEKAPKHQGKHRKFLPVVE 247
G Q+ K +LG F ++ P E AP GK RKF + E
Sbjct: 125 -----GHQS------KEDLGHTMQVAKVSTASLGCFRERFPKENAPWGSGKQRKFQTLFE 173
Query: 248 GSGIGSREKEQTDKVLN 264
+ + + +V+N
Sbjct: 174 DFTTKKKNQLKLFQVVN 190
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.130 0.376 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 333 274 0.00078 115 3 11 23 0.44 34
33 0.40 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 602 (64 KB)
Total size of DFA: 197 KB (2111 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.21u 0.11s 29.32t Elapsed: 00:00:01
Total cpu time: 29.22u 0.11s 29.33t Elapsed: 00:00:01
Start: Fri May 10 18:11:42 2013 End: Fri May 10 18:11:43 2013