BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019975
(333 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3U2U7|MET17_MOUSE Methyltransferase-like protein 17, mitochondrial OS=Mus musculus
GN=Mettl17 PE=2 SV=2
Length = 461
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 73/162 (45%), Gaps = 34/162 (20%)
Query: 37 EHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGTPQGSSIISQMRSHILWME 96
+ D+V+++Y L E+PS DRI +++ LW T LVLVE GT G ++ R+ +L
Sbjct: 259 QFDVVVSAYALSELPSRADRIEVIQNLWRKTSHFLVLVENGTKAGHRLLMDARNLVL--- 315
Query: 97 KRKSRKYEARKSKDTNKETSKDLVTLRSGVHIVAPCPHEGRCPLENSGK--YCHFVQRLQ 154
E K + LR + APCPHE CP N+ K C F Q
Sbjct: 316 ----------------GEKEKSPLDLRPSF-VFAPCPHELPCPQLNASKSLACSFSQ--- 355
Query: 155 RTTSQRAYKRSKSEPLRGFEDEKFSFVAFRRGERPRE--RWP 194
AY + ++E FS V RG P+E RWP
Sbjct: 356 ------AYHPIPFNWNKKPKEEIFSMVILARGS-PKEANRWP 390
Score = 33.5 bits (75), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Query: 274 WGRIIFSPVRRGRQVAMDVCRSIKRDGSEGSFQHLVFT-RSKNPTLHRLAKKSLWGDLWP 332
W RI ++R R V +C +G QH V T R L+R A+ S WGDL P
Sbjct: 389 WPRITQPVLKRPRHVHCHLC------CPDGHMQHAVVTARRHGRDLYRCARVSSWGDLLP 442
>sp|Q9UTM2|CO111_SCHPO Rsm22-cox11 tandem protein 1, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=cox1101 PE=1 SV=2
Length = 753
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 66/133 (49%), Gaps = 27/133 (20%)
Query: 37 EHDLVIASYVLGEVPSLQDRITIVRQLWDLTRD---VLVLVEPGTPQGSSIISQMRSHIL 93
+ LVIAS L E+ S ++ +R LW L + +LVL E GT +G S+I + R+ +L
Sbjct: 245 SYTLVIASNKLLEMKSEKELFDYLRSLWSLVSNDGGLLVLCERGTKRGFSLIQRARTFLL 304
Query: 94 WMEKRKSRKYEARKSKDTNKETSKDLVTLRSGVHIVAPCPHEGRCP--LENS--GKYCHF 149
+KSK+T+ + + HIVAPCPH+GRCP +EN C F
Sbjct: 305 ------------QKSKNTSDK--------QFNAHIVAPCPHDGRCPIDIENGVRANICSF 344
Query: 150 VQRLQRTTSQRAY 162
Q + R Y
Sbjct: 345 KQHFFLSPFSRLY 357
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 256 KDQEKGEEETIPADLGGGWGRIIFSPVRRGRQVAMDVCRSIKRDGSEGSFQHLVFTRSKN 315
D++ E + + W RII P++R V +DVC S+ + + +S+
Sbjct: 393 NDEDLLENVNVTSPTLKNWPRIIRPPLKRDGHVIIDVC------DSDARLRRNIVPKSQG 446
Query: 316 PTLHRLAKKSLWGDLWPF 333
+RLA+KS WGDL+P
Sbjct: 447 KLAYRLARKSAWGDLFPL 464
>sp|Q86ZU7|CO112_SCHPO Rsm22-cox11 tandem protein 2, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=cos1102 PE=1 SV=2
Length = 753
Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 66/133 (49%), Gaps = 27/133 (20%)
Query: 37 EHDLVIASYVLGEVPSLQDRITIVRQLWDLTRD---VLVLVEPGTPQGSSIISQMRSHIL 93
+ LVIAS L E+ S ++ +R LW L + +LVL E GT +G S+I + R+ +L
Sbjct: 245 SYTLVIASNKLLEMKSEKELFDYLRSLWSLVSNDGGLLVLCERGTKRGFSLIQRARTFLL 304
Query: 94 WMEKRKSRKYEARKSKDTNKETSKDLVTLRSGVHIVAPCPHEGRCP--LENS--GKYCHF 149
+KSK+T+ + + HIVAPCPH+GRCP +EN C F
Sbjct: 305 ------------QKSKNTSDK--------QFNAHIVAPCPHDGRCPIDIENGVRANICSF 344
Query: 150 VQRLQRTTSQRAY 162
Q + R Y
Sbjct: 345 KQHFFLSPFSRLY 357
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 256 KDQEKGEEETIPADLGGGWGRIIFSPVRRGRQVAMDVCRSIKRDGSEGSFQHLVFTRSKN 315
D++ E + + W RII P++R V +DVC S+ + + +S+
Sbjct: 393 NDEDLLENVNVTSPTLKNWPRIIRPPLKRDGHVIIDVC------DSDARLRRNIVPKSQG 446
Query: 316 PTLHRLAKKSLWGDLWPF 333
+RLA+KS WGDL+P
Sbjct: 447 KLAYRLARKSAWGDLFPL 464
>sp|P36056|RT22_YEAST 37S ribosomal protein S22, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RSM22 PE=1
SV=1
Length = 628
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 136/319 (42%), Gaps = 59/319 (18%)
Query: 34 SEREHDLVIASYVL---GEVPSLQDRITIVRQLWDLT-RDVLVLVEPGTPQGSSIISQMR 89
+ +E+DL+I ++ L G +Q I L L +V++E G P G II++ R
Sbjct: 265 ASKEYDLIILTHQLLHDGNQFPIQVDENIEHYLNILAPGGHIVIIERGNPMGFEIIARAR 324
Query: 90 SHILWMEKRK----------SRKYEARKSKDTNKETSKDLVTLRSG--VHIVAPCPHEGR 137
L E SR R KD +L + S + ++APCPH+ +
Sbjct: 325 QITLRPENFPDEFGKIPRPWSRGVTVRGKKDA------ELGNISSNYFLKVIAPCPHQRK 378
Query: 138 CPLE--NSGKYCHFVQR-LQRTTSQRAYKRSKSEPLRGFEDEKFSFVAFRRGERPRERWP 194
CPL+ N Y H + L+ Q++ KR KFS + ++G+ W
Sbjct: 379 CPLQVGNPNFYTHKEGKDLKFCNFQKSIKRP-----------KFS-IELKKGKLLATSW- 425
Query: 195 LDGMKFDTLK-EQHAKRNPEDLEI-DYEDLLRLQAEAEVEPCKKEDLVNYESDEVQDDTV 252
DG + + + + +RN D EI +Y L+ E K++ E +++++ V
Sbjct: 426 -DGSQGNASRLKGTGRRNGRDYEILNYSYLI-------FERSHKDENTLKEIKKLRNENV 477
Query: 253 DSDKDQEKGEEETIPADLGGGWGRIIFSPVRRGRQVAMDVCRSIKRDGSEGSFQHLVFTR 312
+ D ++ D W RII PV+R V MD+C G + +R
Sbjct: 478 NGKYDI-----GSLGDDTQNSWPRIINDPVKRKGHVMMDLC------APSGELEKWTVSR 526
Query: 313 SKNPTLHRLAKKSLWGDLW 331
S + ++ A+KS GDLW
Sbjct: 527 SFSKQIYHDARKSKKGDLW 545
>sp|Q2TBP8|MET17_BOVIN Methyltransferase-like protein 17, mitochondrial OS=Bos taurus
GN=METTL17 PE=2 SV=1
Length = 462
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 71/161 (44%), Gaps = 32/161 (19%)
Query: 37 EHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGTPQGSSIISQMRSHILWME 96
+ D+V+A++ L E+PS DR +V+ LW T LVL+E GT G S++ R +L
Sbjct: 259 QFDVVVAAFSLSELPSKADRTDVVQTLWRKTGHFLVLIENGTKAGHSLLMDARDLVL--- 315
Query: 97 KRKSRKYEARKSKDTNKETSKDLVTLRSGVHIVAPCPHEGRCPLENSGK--YCHFVQRLQ 154
KE S + R G + APCPHE CP + K C F Q
Sbjct: 316 --------------NGKEKSP--LDPRPGF-VFAPCPHELPCPQLTASKPLACSFSQ--- 355
Query: 155 RTTSQRAYKRSKSEPLRGFEDEKFSFVAFRRGERPR-ERWP 194
AY + ++EKFS V RG + RWP
Sbjct: 356 ------AYYPIPFSWNKKPKEEKFSLVILARGSPEKANRWP 390
Score = 33.5 bits (75), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Query: 274 WGRIIFSPVRRGRQVAMDVCRSIKRDGSEGSFQHLVFT-RSKNPTLHRLAKKSLWGDLWP 332
W RI ++R R V +C +G QH V T R L+R A+ S WGDL P
Sbjct: 389 WPRITQPVLKRPRHVHCHLC------CPDGHMQHAVITARRHGRDLYRCARVSSWGDLLP 442
>sp|Q9H7H0|MET17_HUMAN Methyltransferase-like protein 17, mitochondrial OS=Homo sapiens
GN=METTL17 PE=1 SV=1
Length = 456
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 71/160 (44%), Gaps = 33/160 (20%)
Query: 37 EHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVEPGTPQGSSIISQMRSHILWME 96
+ D+V++++ L E+PS DR +V+ LW T LVLVE GT G S++ R +L
Sbjct: 258 QFDVVVSAFSLSELPSKADRTEVVQTLWRKTGHFLVLVENGTKAGHSLLMDARDLVL--- 314
Query: 97 KRKSRKYEARKSKDTNKETSKDLVTLRSGVHIVAPCPHEGRCPLENSGKYCHFVQRLQRT 156
K K + R G + APCPHE CP + + C F Q
Sbjct: 315 ----------------KGKEKSPLDPRPGF-VFAPCPHELPCP-QLTNLACSFSQ----- 351
Query: 157 TSQRAYKRSKSEPLRGFEDEKFSFVAFRRGERPRE--RWP 194
AY + ++EKFS V RG P E RWP
Sbjct: 352 ----AYHPIPFSWNKKPKEEKFSMVILARGS-PEEAHRWP 386
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Query: 274 WGRIIFSPVRRGRQVAMDVCRSIKRDGSEGSFQHLVFT-RSKNPTLHRLAKKSLWGDLWP 332
W RI ++R R V +C +G QH V T R L+R A+ S WGDL P
Sbjct: 385 WPRITQPVLKRPRHVHCHLC------CPDGHMQHAVLTARRHGRDLYRCARVSSWGDLLP 438
>sp|Q8IDX6|RBP2A_PLAF7 Reticulocyte-binding protein 2 homolog a OS=Plasmodium falciparum
(isolate 3D7) GN=PF13_0198 PE=3 SV=1
Length = 3130
Score = 33.1 bits (74), Expect = 2.9, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 55/115 (47%), Gaps = 7/115 (6%)
Query: 151 QRLQRTTSQRAYKRSKSEPLRGFEDEKFSFVA-FRRGERPRERWPLDGMKFDTLKEQHAK 209
Q +R + KR + E L + E+ +R E+ R + K + LK Q +
Sbjct: 2742 QEQERLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQ------KEEALKRQEQE 2795
Query: 210 RNPEDLEIDYEDLLRLQAEAEVEPCKKEDLVNYESDEVQDDTVDSDKDQEKGEEE 264
R ++ E+ ++ RL+ E + + K+E+L E + +Q + ++QE+ ++E
Sbjct: 2796 RLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKE 2850
>sp|Q9SLA1|P2C22_ARATH Probable protein phosphatase 2C 22 OS=Arabidopsis thaliana
GN=At2g25620 PE=1 SV=1
Length = 392
Score = 31.6 bits (70), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 225 LQAEAEVEPCKKEDLVNYES---DEVQDDTVDSDKDQEKGEEETIPADLGGGWGRI 277
E + PC K LV + S V D +V+++ EK + E +PA G W I
Sbjct: 41 FDGERSLAPCNKRSLVRHSSLVKTMVSDISVENEFTIEKNKSEFVPATRSGAWSDI 96
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127,389,260
Number of Sequences: 539616
Number of extensions: 5619146
Number of successful extensions: 22578
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 88
Number of HSP's that attempted gapping in prelim test: 22285
Number of HSP's gapped (non-prelim): 303
length of query: 333
length of database: 191,569,459
effective HSP length: 118
effective length of query: 215
effective length of database: 127,894,771
effective search space: 27497375765
effective search space used: 27497375765
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)