Query 019978
Match_columns 333
No_of_seqs 195 out of 2427
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 09:56:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019978.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019978hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fgw_A Glycerol-3-phosphate de 100.0 4E-46 1.4E-50 365.5 23.8 261 18-325 8-283 (391)
2 3k96_A Glycerol-3-phosphate de 100.0 2.2E-39 7.7E-44 314.8 26.6 230 42-330 28-259 (356)
3 1yj8_A Glycerol-3-phosphate de 100.0 2.2E-30 7.6E-35 251.8 21.1 235 43-329 21-270 (375)
4 1x0v_A GPD-C, GPDH-C, glycerol 100.0 2E-28 6.7E-33 235.1 26.1 233 43-327 8-249 (354)
5 1z82_A Glycerol-3-phosphate de 100.0 1.1E-28 3.7E-33 236.3 23.0 219 43-329 14-233 (335)
6 1evy_A Glycerol-3-phosphate de 100.0 2.1E-27 7.4E-32 229.5 24.7 229 45-330 17-253 (366)
7 3hwr_A 2-dehydropantoate 2-red 99.9 3.6E-27 1.2E-31 224.8 10.8 221 42-331 18-248 (318)
8 1txg_A Glycerol-3-phosphate de 99.9 1.5E-25 5.3E-30 212.7 19.1 226 44-330 1-240 (335)
9 3hn2_A 2-dehydropantoate 2-red 99.9 3.8E-26 1.3E-30 216.9 12.6 224 44-331 3-239 (312)
10 3i83_A 2-dehydropantoate 2-red 99.9 1.2E-25 4.2E-30 214.1 11.5 221 44-331 3-238 (320)
11 3ghy_A Ketopantoate reductase 99.9 9.2E-25 3.2E-29 209.3 11.8 234 43-331 3-257 (335)
12 3g17_A Similar to 2-dehydropan 99.9 4.6E-23 1.6E-27 194.1 15.9 210 44-330 3-218 (294)
13 2ew2_A 2-dehydropantoate 2-red 99.9 4.1E-22 1.4E-26 186.6 14.8 225 43-329 3-240 (316)
14 4a7p_A UDP-glucose dehydrogena 99.8 4E-20 1.4E-24 184.4 19.2 218 42-329 7-244 (446)
15 2qyt_A 2-dehydropantoate 2-red 99.8 1.2E-20 4E-25 177.4 12.0 226 43-330 8-249 (317)
16 1ks9_A KPA reductase;, 2-dehyd 99.8 3.2E-20 1.1E-24 172.0 14.6 217 44-329 1-222 (291)
17 2y0c_A BCEC, UDP-glucose dehyd 99.8 4.5E-20 1.5E-24 185.5 16.0 220 41-329 6-250 (478)
18 3ego_A Probable 2-dehydropanto 99.8 2.2E-20 7.7E-25 177.1 12.6 211 44-322 3-222 (307)
19 3gg2_A Sugar dehydrogenase, UD 99.8 3.1E-19 1.1E-23 178.1 17.2 218 44-329 3-240 (450)
20 2f1k_A Prephenate dehydrogenas 99.8 1.8E-19 6.1E-24 167.2 9.6 206 44-322 1-218 (279)
21 3c7a_A Octopine dehydrogenase; 99.7 7.7E-19 2.6E-23 171.8 6.3 228 43-329 2-269 (404)
22 2raf_A Putative dinucleotide-b 99.7 5.7E-17 1.9E-21 145.5 15.5 173 43-303 19-200 (209)
23 1mv8_A GMD, GDP-mannose 6-dehy 99.7 4.4E-16 1.5E-20 154.4 19.4 221 44-329 1-238 (436)
24 3tri_A Pyrroline-5-carboxylate 99.7 5.2E-16 1.8E-20 145.3 18.5 154 43-274 3-162 (280)
25 3g79_A NDP-N-acetyl-D-galactos 99.7 5.6E-16 1.9E-20 155.6 19.5 198 42-289 17-240 (478)
26 1bg6_A N-(1-D-carboxylethyl)-L 99.7 2.3E-16 7.8E-21 150.6 14.1 223 43-330 4-253 (359)
27 3gt0_A Pyrroline-5-carboxylate 99.7 9.8E-16 3.4E-20 140.2 17.7 162 44-279 3-166 (247)
28 2izz_A Pyrroline-5-carboxylate 99.7 9.6E-16 3.3E-20 146.0 15.7 165 43-280 22-191 (322)
29 1vpd_A Tartronate semialdehyde 99.7 1.7E-15 5.9E-20 141.5 15.8 170 44-289 6-180 (299)
30 2o3j_A UDP-glucose 6-dehydroge 99.7 1E-15 3.5E-20 153.8 14.9 220 43-329 9-255 (481)
31 3pdu_A 3-hydroxyisobutyrate de 99.6 8.5E-16 2.9E-20 143.5 13.1 171 43-290 1-177 (287)
32 2g5c_A Prephenate dehydrogenas 99.6 2.1E-16 7.1E-21 146.8 8.7 179 43-293 1-193 (281)
33 4huj_A Uncharacterized protein 99.6 2.1E-15 7.1E-20 136.1 15.0 170 43-280 23-202 (220)
34 1dlj_A UDP-glucose dehydrogena 99.6 1.4E-15 4.9E-20 149.4 14.7 205 44-329 1-232 (402)
35 3ojo_A CAP5O; rossmann fold, c 99.6 3E-15 1E-19 148.6 15.5 193 43-289 11-220 (431)
36 3pef_A 6-phosphogluconate dehy 99.6 3.2E-15 1.1E-19 139.6 14.7 172 44-290 2-177 (287)
37 2h78_A Hibadh, 3-hydroxyisobut 99.6 1.6E-15 5.5E-20 142.3 12.7 173 42-290 2-179 (302)
38 3dtt_A NADP oxidoreductase; st 99.6 2.2E-15 7.4E-20 138.1 12.8 194 41-289 17-226 (245)
39 3d1l_A Putative NADP oxidoredu 99.6 1.4E-14 4.7E-19 133.4 16.9 212 43-333 10-234 (266)
40 2uyy_A N-PAC protein; long-cha 99.6 7E-15 2.4E-19 138.8 15.1 170 43-289 30-205 (316)
41 3qha_A Putative oxidoreductase 99.6 5.6E-15 1.9E-19 139.0 14.3 170 43-290 15-187 (296)
42 2q3e_A UDP-glucose 6-dehydroge 99.6 4.7E-15 1.6E-19 148.3 14.6 220 42-329 4-249 (467)
43 3doj_A AT3G25530, dehydrogenas 99.6 7.1E-15 2.4E-19 139.1 14.9 174 40-290 18-197 (310)
44 3pid_A UDP-glucose 6-dehydroge 99.6 1.4E-14 4.9E-19 143.6 17.4 188 39-289 32-238 (432)
45 2zyd_A 6-phosphogluconate dehy 99.6 3.8E-15 1.3E-19 149.7 13.4 156 43-270 15-174 (480)
46 4dll_A 2-hydroxy-3-oxopropiona 99.6 8.8E-15 3E-19 139.2 15.2 173 40-289 28-204 (320)
47 3cky_A 2-hydroxymethyl glutara 99.6 9.9E-15 3.4E-19 136.4 14.3 171 42-289 3-179 (301)
48 2pgd_A 6-phosphogluconate dehy 99.6 5.6E-15 1.9E-19 148.4 13.3 157 44-271 3-163 (482)
49 3g0o_A 3-hydroxyisobutyrate de 99.6 8.3E-15 2.8E-19 138.0 13.4 173 42-290 6-185 (303)
50 2cvz_A Dehydrogenase, 3-hydrox 99.6 2.9E-14 9.8E-19 132.2 16.0 167 43-289 1-170 (289)
51 1yb4_A Tartronic semialdehyde 99.6 1.3E-14 4.6E-19 135.0 13.8 171 42-290 2-178 (295)
52 1yqg_A Pyrroline-5-carboxylate 99.6 2.2E-14 7.4E-19 131.6 14.6 152 44-276 1-155 (263)
53 2rcy_A Pyrroline carboxylate r 99.6 3.6E-14 1.2E-18 130.0 15.9 156 43-280 4-161 (262)
54 2p4q_A 6-phosphogluconate dehy 99.6 1.2E-14 4E-19 146.7 13.8 156 44-270 11-170 (497)
55 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.6 1.7E-14 5.9E-19 144.8 14.7 158 44-270 2-164 (478)
56 2gf2_A Hibadh, 3-hydroxyisobut 99.6 7.9E-14 2.7E-18 130.0 16.5 168 44-288 1-174 (296)
57 2iz1_A 6-phosphogluconate dehy 99.5 4.7E-14 1.6E-18 141.4 15.3 155 43-270 5-164 (474)
58 3qsg_A NAD-binding phosphogluc 99.5 2.1E-13 7E-18 129.4 17.9 173 42-291 23-200 (312)
59 3vtf_A UDP-glucose 6-dehydroge 99.5 2.9E-13 9.8E-18 134.6 19.4 215 13-289 3-233 (444)
60 4ezb_A Uncharacterized conserv 99.5 2.2E-13 7.4E-18 129.6 16.7 176 43-290 24-201 (317)
61 4e21_A 6-phosphogluconate dehy 99.5 8.7E-14 3E-18 134.9 10.7 171 43-289 22-215 (358)
62 2dpo_A L-gulonate 3-dehydrogen 99.5 5.5E-13 1.9E-17 127.4 16.1 184 40-279 3-192 (319)
63 3ggo_A Prephenate dehydrogenas 99.5 2.8E-13 9.5E-18 129.0 13.3 161 43-275 33-204 (314)
64 3b1f_A Putative prephenate deh 99.5 2.6E-13 9E-18 126.3 12.7 164 43-276 6-181 (290)
65 1jay_A Coenzyme F420H2:NADP+ o 99.5 1.4E-12 4.7E-17 115.8 16.2 185 44-289 1-194 (212)
66 2ahr_A Putative pyrroline carb 99.5 1.2E-12 4.2E-17 119.8 16.1 153 42-276 2-156 (259)
67 4gwg_A 6-phosphogluconate dehy 99.5 3.3E-13 1.1E-17 135.7 13.3 158 42-270 3-164 (484)
68 1f0y_A HCDH, L-3-hydroxyacyl-C 99.4 1.3E-12 4.5E-17 122.7 13.5 183 42-276 14-201 (302)
69 3obb_A Probable 3-hydroxyisobu 99.4 1.4E-12 4.8E-17 123.4 13.6 181 42-300 2-191 (300)
70 3c24_A Putative oxidoreductase 99.4 4.5E-13 1.6E-17 124.9 10.0 153 43-275 11-183 (286)
71 1i36_A Conserved hypothetical 99.4 7.5E-12 2.6E-16 114.8 17.9 161 44-290 1-165 (264)
72 2vns_A Metalloreductase steap3 99.4 2.1E-12 7.3E-17 116.0 12.9 167 42-279 27-197 (215)
73 4e12_A Diketoreductase; oxidor 99.4 3.9E-12 1.3E-16 118.7 14.5 181 43-279 4-190 (283)
74 4gbj_A 6-phosphogluconate dehy 99.4 3.8E-12 1.3E-16 120.2 14.1 170 44-290 6-180 (297)
75 2pv7_A T-protein [includes: ch 99.4 5.6E-12 1.9E-16 118.6 15.2 154 43-285 21-175 (298)
76 3l6d_A Putative oxidoreductase 99.4 6.1E-12 2.1E-16 118.8 14.2 157 42-274 8-167 (306)
77 3ado_A Lambda-crystallin; L-gu 99.3 2.9E-12 1E-16 122.4 10.3 126 39-203 2-129 (319)
78 2yjz_A Metalloreductase steap4 99.0 1.1E-13 3.6E-18 123.8 0.0 161 44-279 20-185 (201)
79 2i76_A Hypothetical protein; N 99.3 5.8E-13 2E-17 123.9 3.4 199 43-326 2-209 (276)
80 1np3_A Ketol-acid reductoisome 99.3 2.8E-11 9.5E-16 116.1 13.9 180 44-301 17-217 (338)
81 3k6j_A Protein F01G10.3, confi 99.3 5.2E-11 1.8E-15 118.9 15.7 177 42-279 53-234 (460)
82 3mog_A Probable 3-hydroxybutyr 99.2 7.8E-11 2.7E-15 118.4 13.5 179 43-279 5-188 (483)
83 2wtb_A MFP2, fatty acid multif 99.2 5.8E-10 2E-14 117.2 17.6 179 42-279 311-495 (725)
84 1zcj_A Peroxisomal bifunctiona 99.1 7E-10 2.4E-14 110.8 16.4 118 42-202 36-155 (463)
85 1zej_A HBD-9, 3-hydroxyacyl-CO 99.1 4.2E-10 1.4E-14 106.2 13.7 157 42-277 11-173 (293)
86 1wdk_A Fatty oxidation complex 99.1 2.1E-10 7.1E-15 120.4 12.8 179 41-279 312-497 (715)
87 3ktd_A Prephenate dehydrogenas 99.1 4.6E-10 1.6E-14 108.1 11.8 158 42-274 7-185 (341)
88 3fr7_A Putative ketol-acid red 99.0 3.5E-09 1.2E-13 105.9 16.4 153 44-269 55-229 (525)
89 1lld_A L-lactate dehydrogenase 99.0 1.1E-09 3.7E-14 103.2 8.5 107 42-203 6-130 (319)
90 2ewd_A Lactate dehydrogenase,; 99.0 5.4E-09 1.8E-13 99.1 12.9 107 42-202 3-126 (317)
91 1pzg_A LDH, lactate dehydrogen 98.9 5E-09 1.7E-13 100.3 12.1 106 43-201 9-136 (331)
92 1hyh_A L-hicdh, L-2-hydroxyiso 98.9 5.6E-09 1.9E-13 98.5 10.9 106 43-202 1-127 (309)
93 2hjr_A Malate dehydrogenase; m 98.9 1.7E-08 5.7E-13 96.5 12.3 103 44-200 15-134 (328)
94 3zwc_A Peroxisomal bifunctiona 98.8 3.4E-08 1.2E-12 103.9 15.5 119 42-203 315-435 (742)
95 1a5z_A L-lactate dehydrogenase 98.8 2.4E-08 8.3E-13 94.8 11.1 103 44-202 1-121 (319)
96 3dfu_A Uncharacterized protein 98.7 4.1E-08 1.4E-12 89.7 9.5 128 42-276 5-133 (232)
97 1guz_A Malate dehydrogenase; o 98.7 7E-08 2.4E-12 91.3 10.8 107 44-202 1-123 (310)
98 1t2d_A LDH-P, L-lactate dehydr 98.7 1.1E-07 3.8E-12 90.6 12.2 105 42-200 3-129 (322)
99 2v6b_A L-LDH, L-lactate dehydr 98.7 5.1E-08 1.7E-12 92.0 9.1 103 44-202 1-121 (304)
100 1oju_A MDH, malate dehydrogena 98.6 1.1E-07 3.7E-12 89.7 10.1 104 44-201 1-122 (294)
101 3ba1_A HPPR, hydroxyphenylpyru 98.6 7.4E-08 2.5E-12 92.3 8.4 92 43-203 164-257 (333)
102 1u8x_X Maltose-6'-phosphate gl 98.6 1.1E-07 3.6E-12 95.4 9.2 111 44-202 29-176 (472)
103 1obb_A Maltase, alpha-glucosid 98.5 1.7E-07 5.9E-12 94.0 9.5 83 43-170 3-87 (480)
104 4dgs_A Dehydrogenase; structur 98.5 3.1E-07 1.1E-11 88.3 9.8 92 43-203 171-264 (340)
105 2i6t_A Ubiquitin-conjugating e 98.5 5.1E-07 1.7E-11 85.4 11.2 107 35-201 6-129 (303)
106 2gcg_A Glyoxylate reductase/hy 98.5 1.6E-07 5.5E-12 89.6 7.0 95 43-202 155-251 (330)
107 1lss_A TRK system potassium up 98.5 3.3E-07 1.1E-11 74.7 7.9 38 43-86 4-41 (140)
108 2g1u_A Hypothetical protein TM 98.5 1.1E-06 3.9E-11 74.0 11.5 103 44-202 20-123 (155)
109 2dbq_A Glyoxylate reductase; D 98.5 1.7E-07 5.7E-12 89.7 7.0 96 42-203 149-246 (334)
110 3gvx_A Glycerate dehydrogenase 98.5 2E-07 6.9E-12 87.7 7.0 92 43-203 122-215 (290)
111 1s6y_A 6-phospho-beta-glucosid 98.5 3.7E-07 1.3E-11 90.9 9.3 111 43-202 7-157 (450)
112 3gvi_A Malate dehydrogenase; N 98.4 1.9E-06 6.3E-11 82.3 12.5 105 43-201 7-128 (324)
113 3fef_A Putative glucosidase LP 98.4 9.2E-07 3.1E-11 88.0 10.2 106 44-202 6-151 (450)
114 1ur5_A Malate dehydrogenase; o 98.4 1.7E-06 5.7E-11 81.8 11.5 104 44-201 3-123 (309)
115 1ldn_A L-lactate dehydrogenase 98.4 1.6E-06 5.5E-11 82.2 11.0 42 40-85 3-44 (316)
116 2w2k_A D-mandelate dehydrogena 98.4 4.9E-07 1.7E-11 87.0 7.2 95 42-200 162-259 (348)
117 2d0i_A Dehydrogenase; structur 98.4 3.7E-07 1.3E-11 87.3 6.3 95 42-203 145-241 (333)
118 3pp8_A Glyoxylate/hydroxypyruv 98.4 6.7E-07 2.3E-11 85.1 7.9 95 43-203 139-235 (315)
119 1y6j_A L-lactate dehydrogenase 98.3 2E-06 6.8E-11 81.7 10.8 41 42-86 6-46 (318)
120 2hk9_A Shikimate dehydrogenase 98.3 2.9E-07 1E-11 85.4 4.6 119 15-198 103-222 (275)
121 3l4b_C TRKA K+ channel protien 98.3 1.2E-06 3.9E-11 78.0 7.1 102 44-201 1-103 (218)
122 2i99_A MU-crystallin homolog; 98.2 1E-06 3.5E-11 83.3 6.4 94 40-196 132-225 (312)
123 3p7m_A Malate dehydrogenase; p 98.2 8.1E-06 2.8E-10 77.7 12.5 38 43-86 5-43 (321)
124 3llv_A Exopolyphosphatase-rela 98.2 1.9E-06 6.6E-11 71.0 7.1 39 43-87 6-44 (141)
125 3fwz_A Inner membrane protein 98.2 1E-05 3.5E-10 67.0 11.3 39 43-87 7-45 (140)
126 3jtm_A Formate dehydrogenase, 98.2 1.8E-06 6E-11 83.4 7.5 97 43-203 164-262 (351)
127 2d4a_B Malate dehydrogenase; a 98.2 7.3E-06 2.5E-10 77.5 11.5 103 45-201 1-120 (308)
128 3oj0_A Glutr, glutamyl-tRNA re 98.2 9.5E-07 3.3E-11 73.5 4.8 91 43-198 21-111 (144)
129 3evt_A Phosphoglycerate dehydr 98.2 1.4E-06 4.7E-11 83.3 6.1 95 43-203 137-233 (324)
130 3pqe_A L-LDH, L-lactate dehydr 98.2 7.3E-06 2.5E-10 78.2 10.8 41 42-86 4-44 (326)
131 1ez4_A Lactate dehydrogenase; 98.2 9.7E-06 3.3E-10 77.0 11.4 40 43-86 5-44 (318)
132 1ygy_A PGDH, D-3-phosphoglycer 98.2 1.4E-06 4.7E-11 88.3 5.8 96 42-203 141-238 (529)
133 2ekl_A D-3-phosphoglycerate de 98.2 3.4E-06 1.1E-10 80.0 8.1 92 43-200 142-235 (313)
134 1gdh_A D-glycerate dehydrogena 98.2 2.2E-06 7.6E-11 81.5 6.4 92 43-199 146-240 (320)
135 1qp8_A Formate dehydrogenase; 98.1 2.7E-06 9.1E-11 80.4 6.9 90 42-201 123-214 (303)
136 4g2n_A D-isomer specific 2-hyd 98.1 3.5E-06 1.2E-10 81.1 7.7 95 43-203 173-269 (345)
137 1mx3_A CTBP1, C-terminal bindi 98.1 3.2E-06 1.1E-10 81.4 7.4 98 40-202 165-264 (347)
138 2nac_A NAD-dependent formate d 98.1 3.3E-06 1.1E-10 82.7 7.2 97 42-202 190-288 (393)
139 3ldh_A Lactate dehydrogenase; 98.1 9.5E-06 3.3E-10 77.6 10.2 107 42-201 20-142 (330)
140 1y81_A Conserved hypothetical 98.1 1E-05 3.5E-10 67.7 9.2 75 42-182 13-91 (138)
141 3tl2_A Malate dehydrogenase; c 98.1 1.3E-05 4.4E-10 76.2 11.0 34 43-82 8-42 (315)
142 3d0o_A L-LDH 1, L-lactate dehy 98.1 8.8E-06 3E-10 77.2 9.7 40 42-85 5-44 (317)
143 3nep_X Malate dehydrogenase; h 98.1 9.4E-06 3.2E-10 77.1 9.9 39 44-86 1-39 (314)
144 2zqz_A L-LDH, L-lactate dehydr 98.1 1.2E-05 4.3E-10 76.5 10.7 41 42-86 8-48 (326)
145 3ic5_A Putative saccharopine d 98.1 5.4E-06 1.8E-10 65.3 6.8 39 43-86 5-43 (118)
146 2j6i_A Formate dehydrogenase; 98.1 3.4E-06 1.2E-10 81.7 6.7 96 42-201 163-261 (364)
147 2hmt_A YUAA protein; RCK, KTN, 98.1 4.1E-06 1.4E-10 68.2 6.0 38 43-86 6-43 (144)
148 3q2i_A Dehydrogenase; rossmann 98.1 1.8E-05 6.3E-10 75.3 11.2 81 42-181 12-96 (354)
149 1wwk_A Phosphoglycerate dehydr 98.1 5E-06 1.7E-10 78.6 7.0 91 43-199 142-234 (307)
150 3hg7_A D-isomer specific 2-hyd 98.1 1.7E-06 6E-11 82.5 3.9 95 43-203 140-236 (324)
151 3euw_A MYO-inositol dehydrogen 98.1 1.7E-05 5.9E-10 75.1 10.6 82 42-182 3-87 (344)
152 3c85_A Putative glutathione-re 98.1 9.6E-06 3.3E-10 69.8 8.0 39 43-86 39-77 (183)
153 3qy9_A DHPR, dihydrodipicolina 98.1 1.1E-05 3.8E-10 73.9 8.7 109 43-239 3-112 (243)
154 2dc1_A L-aspartate dehydrogena 98.0 2.5E-05 8.6E-10 70.4 10.9 81 44-199 1-83 (236)
155 3abi_A Putative uncharacterize 98.0 6.6E-06 2.3E-10 79.1 7.4 39 41-86 14-52 (365)
156 2cuk_A Glycerate dehydrogenase 98.0 3.7E-06 1.3E-10 79.7 5.1 88 43-201 144-233 (311)
157 3gg9_A D-3-phosphoglycerate de 98.0 3.3E-06 1.1E-10 81.5 4.8 96 43-203 160-257 (352)
158 1sc6_A PGDH, D-3-phosphoglycer 98.0 7E-06 2.4E-10 80.6 6.9 93 42-202 144-238 (404)
159 3vku_A L-LDH, L-lactate dehydr 98.0 2.8E-05 9.5E-10 74.2 10.7 42 41-86 7-48 (326)
160 2ho3_A Oxidoreductase, GFO/IDH 98.0 3.6E-05 1.2E-09 72.3 11.2 81 43-181 1-83 (325)
161 2d5c_A AROE, shikimate 5-dehyd 98.0 6.1E-06 2.1E-10 75.7 5.7 59 19-86 95-153 (263)
162 3k5p_A D-3-phosphoglycerate de 98.0 1.1E-05 3.7E-10 79.5 7.5 93 43-203 156-250 (416)
163 3uuw_A Putative oxidoreductase 98.0 1.9E-05 6.6E-10 73.7 8.8 94 43-202 6-101 (308)
164 4hkt_A Inositol 2-dehydrogenas 98.0 3.5E-05 1.2E-09 72.6 10.6 80 43-182 3-85 (331)
165 2g76_A 3-PGDH, D-3-phosphoglyc 98.0 1.1E-05 3.7E-10 77.3 7.1 93 43-201 165-259 (335)
166 4e5n_A Thermostable phosphite 98.0 6.4E-06 2.2E-10 78.7 5.5 96 43-203 145-242 (330)
167 2duw_A Putative COA-binding pr 98.0 1.6E-05 5.6E-10 66.9 7.3 75 43-182 13-92 (145)
168 4aj2_A L-lactate dehydrogenase 97.9 2E-05 7E-10 75.3 8.4 108 41-201 17-140 (331)
169 2vt3_A REX, redox-sensing tran 97.9 3.3E-05 1.1E-09 69.5 9.0 96 25-182 69-167 (215)
170 2xxj_A L-LDH, L-lactate dehydr 97.9 2.8E-05 9.5E-10 73.6 8.9 39 44-86 1-39 (310)
171 3ezy_A Dehydrogenase; structur 97.9 4.1E-05 1.4E-09 72.6 10.0 81 43-181 2-85 (344)
172 1j4a_A D-LDH, D-lactate dehydr 97.9 1.2E-05 4E-10 76.9 6.2 91 44-201 147-239 (333)
173 3mz0_A Inositol 2-dehydrogenas 97.9 5.2E-05 1.8E-09 71.9 10.6 82 43-181 2-87 (344)
174 3ec7_A Putative dehydrogenase; 97.9 6.2E-05 2.1E-09 72.0 11.2 83 43-182 23-109 (357)
175 2yq5_A D-isomer specific 2-hyd 97.9 1.8E-05 6.1E-10 76.1 6.9 92 44-203 149-242 (343)
176 2pi1_A D-lactate dehydrogenase 97.9 1.6E-05 5.5E-10 76.1 6.5 93 44-203 142-236 (334)
177 3e9m_A Oxidoreductase, GFO/IDH 97.9 3.4E-05 1.2E-09 72.9 8.7 82 42-182 4-89 (330)
178 1xdw_A NAD+-dependent (R)-2-hy 97.9 1.4E-05 4.7E-10 76.3 5.9 91 44-202 147-239 (331)
179 3rc1_A Sugar 3-ketoreductase; 97.9 7.1E-05 2.4E-09 71.4 10.8 94 43-202 27-124 (350)
180 1dxy_A D-2-hydroxyisocaproate 97.9 1.8E-05 6.3E-10 75.5 6.6 89 44-200 146-236 (333)
181 3d4o_A Dipicolinate synthase s 97.9 3.3E-05 1.1E-09 72.0 8.2 92 43-199 155-246 (293)
182 3evn_A Oxidoreductase, GFO/IDH 97.8 6.8E-05 2.3E-09 70.7 10.3 94 43-202 5-102 (329)
183 3db2_A Putative NADPH-dependen 97.8 5.1E-05 1.8E-09 72.2 9.4 80 43-181 5-87 (354)
184 2rir_A Dipicolinate synthase, 97.8 2.7E-05 9.3E-10 72.8 7.2 93 42-199 156-248 (300)
185 3oet_A Erythronate-4-phosphate 97.8 1.5E-05 5.3E-10 77.6 5.6 91 44-203 120-216 (381)
186 4hy3_A Phosphoglycerate oxidor 97.8 3.1E-05 1.1E-09 75.0 7.6 94 44-203 177-272 (365)
187 3fi9_A Malate dehydrogenase; s 97.8 6.9E-05 2.4E-09 72.0 9.8 105 43-201 8-130 (343)
188 1mld_A Malate dehydrogenase; o 97.8 9E-05 3.1E-09 70.1 10.2 101 44-201 1-121 (314)
189 1id1_A Putative potassium chan 97.8 5.8E-05 2E-09 63.1 8.0 104 44-201 4-109 (153)
190 2x0j_A Malate dehydrogenase; o 97.8 0.00015 5E-09 68.3 11.5 38 44-85 1-38 (294)
191 3cea_A MYO-inositol 2-dehydrog 97.8 0.00011 3.7E-09 69.4 10.5 81 42-181 7-92 (346)
192 2o4c_A Erythronate-4-phosphate 97.8 1.2E-05 4E-10 78.4 3.5 91 43-202 116-212 (380)
193 1tlt_A Putative oxidoreductase 97.7 0.00013 4.3E-09 68.4 10.4 80 43-181 5-86 (319)
194 2glx_A 1,5-anhydro-D-fructose 97.7 9.4E-05 3.2E-09 69.4 9.5 78 44-181 1-83 (332)
195 3c1a_A Putative oxidoreductase 97.7 6.3E-05 2.2E-09 70.4 8.3 92 42-201 9-103 (315)
196 2d59_A Hypothetical protein PH 97.7 0.00015 5.1E-09 60.9 9.6 81 32-182 15-99 (144)
197 4f3y_A DHPR, dihydrodipicolina 97.7 0.00019 6.5E-09 66.8 11.1 125 43-239 7-133 (272)
198 3u95_A Glycoside hydrolase, fa 97.7 0.00014 4.9E-09 72.7 10.3 81 44-168 1-84 (477)
199 1x7d_A Ornithine cyclodeaminas 97.7 5.6E-05 1.9E-09 72.7 7.0 99 41-196 127-225 (350)
200 4g65_A TRK system potassium up 97.7 4.7E-05 1.6E-09 75.8 6.5 92 42-186 2-94 (461)
201 1xea_A Oxidoreductase, GFO/IDH 97.7 6E-05 2E-09 70.8 6.8 39 43-86 2-41 (323)
202 1ydw_A AX110P-like protein; st 97.6 0.00019 6.4E-09 68.5 10.1 85 42-181 5-92 (362)
203 2z2v_A Hypothetical protein PH 97.6 4.3E-05 1.5E-09 73.8 5.6 41 40-87 13-53 (365)
204 3ohs_X Trans-1,2-dihydrobenzen 97.6 0.00014 4.9E-09 68.5 9.1 82 43-181 2-87 (334)
205 3ijp_A DHPR, dihydrodipicolina 97.6 0.00047 1.6E-08 64.7 12.5 128 42-240 20-149 (288)
206 1iuk_A Hypothetical protein TT 97.6 9.5E-05 3.3E-09 61.9 7.0 86 30-183 4-93 (140)
207 1b8p_A Protein (malate dehydro 97.6 0.00021 7E-09 67.9 9.9 110 42-200 4-136 (329)
208 3ulk_A Ketol-acid reductoisome 97.6 0.0002 6.9E-09 70.8 9.9 173 44-289 38-232 (491)
209 3u62_A Shikimate dehydrogenase 97.6 5.2E-05 1.8E-09 69.8 5.2 36 45-86 110-146 (253)
210 4had_A Probable oxidoreductase 97.6 0.00033 1.1E-08 66.3 10.9 83 42-182 22-108 (350)
211 3l9w_A Glutathione-regulated p 97.6 0.00014 4.9E-09 71.4 8.2 101 42-199 3-104 (413)
212 1smk_A Malate dehydrogenase, g 97.6 0.00024 8.1E-09 67.5 9.4 39 41-83 6-45 (326)
213 3m2t_A Probable dehydrogenase; 97.6 0.00026 8.9E-09 67.7 9.6 82 43-182 5-90 (359)
214 3hdj_A Probable ornithine cycl 97.5 0.0001 3.5E-09 69.8 6.5 94 41-196 119-212 (313)
215 3keo_A Redox-sensing transcrip 97.5 0.00023 8E-09 63.9 8.2 99 24-183 67-171 (212)
216 2egg_A AROE, shikimate 5-dehyd 97.5 0.00018 6E-09 67.5 7.5 66 15-87 114-180 (297)
217 1omo_A Alanine dehydrogenase; 97.5 0.00019 6.6E-09 68.0 7.8 43 41-87 123-165 (322)
218 4h7p_A Malate dehydrogenase; s 97.5 0.00038 1.3E-08 66.8 9.9 129 20-201 7-154 (345)
219 3e18_A Oxidoreductase; dehydro 97.5 0.00036 1.2E-08 66.7 9.7 80 43-182 5-87 (359)
220 1zh8_A Oxidoreductase; TM0312, 97.5 0.00053 1.8E-08 65.0 10.6 86 39-181 14-103 (340)
221 3moi_A Probable dehydrogenase; 97.5 0.00032 1.1E-08 67.7 9.0 81 43-182 2-86 (387)
222 2p2s_A Putative oxidoreductase 97.4 0.00059 2E-08 64.3 10.5 80 43-181 4-87 (336)
223 3f4l_A Putative oxidoreductase 97.4 0.00039 1.3E-08 65.9 9.3 80 43-181 2-86 (345)
224 2dt5_A AT-rich DNA-binding pro 97.4 0.00037 1.3E-08 62.4 8.4 97 25-182 64-162 (211)
225 3e82_A Putative oxidoreductase 97.4 0.00065 2.2E-08 65.0 10.4 79 42-181 6-88 (364)
226 2nu8_A Succinyl-COA ligase [AD 97.4 0.0012 4.2E-08 61.6 12.0 94 42-203 6-102 (288)
227 2aef_A Calcium-gated potassium 97.4 0.00016 5.6E-09 64.5 5.7 37 43-86 9-45 (234)
228 1h6d_A Precursor form of gluco 97.4 0.00034 1.2E-08 68.8 8.4 86 42-181 82-171 (433)
229 1dih_A Dihydrodipicolinate red 97.4 0.00073 2.5E-08 62.7 9.8 127 43-240 5-133 (273)
230 3kux_A Putative oxidoreductase 97.4 0.00084 2.9E-08 63.8 10.5 79 42-181 6-88 (352)
231 3bio_A Oxidoreductase, GFO/IDH 97.4 0.00065 2.2E-08 63.7 9.5 38 43-85 9-47 (304)
232 3don_A Shikimate dehydrogenase 97.4 0.00014 4.6E-09 67.9 4.7 37 44-86 118-155 (277)
233 4gqa_A NAD binding oxidoreduct 97.3 0.00059 2E-08 66.2 9.3 88 41-182 24-118 (412)
234 3hhp_A Malate dehydrogenase; M 97.3 0.0016 5.5E-08 61.6 11.8 34 44-82 1-37 (312)
235 3fhl_A Putative oxidoreductase 97.3 0.0011 3.9E-08 63.2 10.7 80 42-182 4-87 (362)
236 3v5n_A Oxidoreductase; structu 97.3 0.00058 2E-08 66.7 8.5 84 42-181 36-131 (417)
237 1jw9_B Molybdopterin biosynthe 97.3 0.0021 7.3E-08 58.5 11.6 33 44-82 32-65 (249)
238 1up7_A 6-phospho-beta-glucosid 97.3 0.0011 3.8E-08 65.2 10.2 22 147-168 60-81 (417)
239 1npy_A Hypothetical shikimate 97.3 0.00048 1.6E-08 63.9 7.2 64 15-87 94-158 (271)
240 1f06_A MESO-diaminopimelate D- 97.2 0.00081 2.8E-08 63.5 8.7 36 43-83 3-39 (320)
241 3h9u_A Adenosylhomocysteinase; 97.2 0.00045 1.5E-08 68.3 7.1 89 44-199 212-300 (436)
242 1o6z_A MDH, malate dehydrogena 97.2 0.0011 3.7E-08 62.2 9.3 37 44-84 1-40 (303)
243 3jyo_A Quinate/shikimate dehyd 97.2 0.00072 2.5E-08 63.1 8.0 65 15-87 101-166 (283)
244 3u3x_A Oxidoreductase; structu 97.2 0.0011 3.7E-08 63.4 9.3 94 43-202 26-123 (361)
245 3dty_A Oxidoreductase, GFO/IDH 97.2 0.00078 2.7E-08 65.2 7.8 84 43-182 12-107 (398)
246 7mdh_A Protein (malate dehydro 97.1 0.0032 1.1E-07 61.1 12.0 42 42-84 31-73 (375)
247 3o9z_A Lipopolysaccaride biosy 97.1 0.0028 9.7E-08 59.4 11.3 94 42-202 2-107 (312)
248 3p2y_A Alanine dehydrogenase/p 97.1 0.00056 1.9E-08 66.6 6.4 40 42-87 183-222 (381)
249 3gdo_A Uncharacterized oxidore 97.1 0.0013 4.5E-08 62.7 8.8 79 42-181 4-86 (358)
250 3upl_A Oxidoreductase; rossman 97.1 0.003 1E-07 62.6 11.5 40 42-86 22-62 (446)
251 3d64_A Adenosylhomocysteinase; 97.1 0.00064 2.2E-08 68.3 6.7 91 42-199 276-366 (494)
252 1v8b_A Adenosylhomocysteinase; 97.1 0.00072 2.5E-08 67.6 7.0 91 42-199 256-346 (479)
253 3i23_A Oxidoreductase, GFO/IDH 97.1 0.002 6.9E-08 61.1 9.8 35 148-182 51-87 (349)
254 3ce6_A Adenosylhomocysteinase; 97.1 0.00085 2.9E-08 67.4 7.4 37 43-85 274-310 (494)
255 2ixa_A Alpha-N-acetylgalactosa 97.1 0.0028 9.7E-08 62.2 11.0 87 42-181 19-112 (444)
256 3oa2_A WBPB; oxidoreductase, s 97.1 0.0036 1.2E-07 58.8 11.2 81 42-182 2-95 (318)
257 4ew6_A D-galactose-1-dehydroge 97.0 0.0033 1.1E-07 59.4 10.8 87 43-202 25-116 (330)
258 4fb5_A Probable oxidoreductase 97.0 0.003 1E-07 59.9 10.4 85 44-182 26-116 (393)
259 1gpj_A Glutamyl-tRNA reductase 97.0 0.0012 4.1E-08 64.4 7.5 37 43-85 167-204 (404)
260 1oi7_A Succinyl-COA synthetase 97.0 0.0059 2E-07 56.9 11.9 94 42-203 6-102 (288)
261 3btv_A Galactose/lactose metab 97.0 0.0013 4.4E-08 64.6 7.7 84 42-181 19-110 (438)
262 3n58_A Adenosylhomocysteinase; 97.0 0.0026 8.9E-08 63.1 9.5 34 44-83 248-281 (464)
263 3kb6_A D-lactate dehydrogenase 97.0 0.00093 3.2E-08 63.8 6.1 93 44-203 142-236 (334)
264 2vhw_A Alanine dehydrogenase; 96.9 0.0006 2.1E-08 65.9 4.8 39 42-86 167-205 (377)
265 2nvw_A Galactose/lactose metab 96.9 0.0026 8.7E-08 63.5 9.5 84 42-181 38-129 (479)
266 2yv2_A Succinyl-COA synthetase 96.9 0.0067 2.3E-07 56.8 11.8 97 39-203 9-109 (297)
267 3ff4_A Uncharacterized protein 96.9 0.0031 1E-07 51.6 8.3 89 42-203 3-95 (122)
268 2fp4_A Succinyl-COA ligase [GD 96.9 0.0076 2.6E-07 56.7 11.9 94 42-203 12-109 (305)
269 3phh_A Shikimate dehydrogenase 96.9 0.0013 4.3E-08 61.1 6.4 39 43-87 118-156 (269)
270 4gx0_A TRKA domain protein; me 96.9 0.003 1E-07 63.8 9.7 111 27-199 333-444 (565)
271 2axq_A Saccharopine dehydrogen 96.9 0.0018 6E-08 64.6 7.7 38 44-86 24-61 (467)
272 5mdh_A Malate dehydrogenase; o 96.9 0.0032 1.1E-07 60.0 9.2 40 42-82 2-44 (333)
273 4gmf_A Yersiniabactin biosynth 96.9 0.00087 3E-08 64.9 5.3 73 42-173 6-79 (372)
274 2eez_A Alanine dehydrogenase; 96.9 0.00096 3.3E-08 64.2 5.6 39 42-86 165-203 (369)
275 4h3v_A Oxidoreductase domain p 96.8 0.0038 1.3E-07 59.0 9.3 85 44-182 7-97 (390)
276 2yv1_A Succinyl-COA ligase [AD 96.8 0.0086 2.9E-07 56.0 11.2 94 42-203 12-108 (294)
277 3oqb_A Oxidoreductase; structu 96.8 0.0025 8.7E-08 61.0 7.6 32 150-181 71-104 (383)
278 3gvp_A Adenosylhomocysteinase 96.8 0.0015 5.3E-08 64.4 6.1 34 44-83 221-254 (435)
279 4dio_A NAD(P) transhydrogenase 96.7 0.0022 7.7E-08 62.8 7.1 40 42-87 189-228 (405)
280 3do5_A HOM, homoserine dehydro 96.7 0.0037 1.3E-07 59.4 8.2 104 43-199 2-117 (327)
281 4ina_A Saccharopine dehydrogen 96.7 0.002 6.9E-08 62.8 6.4 42 43-87 1-42 (405)
282 3r6d_A NAD-dependent epimerase 96.7 0.0042 1.4E-07 54.2 7.9 38 43-86 4-45 (221)
283 3dr3_A N-acetyl-gamma-glutamyl 96.6 0.0088 3E-07 57.1 10.3 42 153-200 68-109 (337)
284 1p9l_A Dihydrodipicolinate red 96.6 0.015 5.2E-07 53.0 11.5 63 160-238 45-107 (245)
285 2czc_A Glyceraldehyde-3-phosph 96.6 0.0091 3.1E-07 56.7 10.1 37 44-85 3-40 (334)
286 1nvm_B Acetaldehyde dehydrogen 96.5 0.014 4.8E-07 55.0 10.8 39 42-84 3-42 (312)
287 3o8q_A Shikimate 5-dehydrogena 96.5 0.0036 1.2E-07 58.2 6.6 65 15-87 100-165 (281)
288 3fbt_A Chorismate mutase and s 96.5 0.0028 9.5E-08 59.1 5.7 64 15-86 96-160 (282)
289 1lc0_A Biliverdin reductase A; 96.5 0.012 4.2E-07 54.4 10.0 23 42-64 6-28 (294)
290 3ip3_A Oxidoreductase, putativ 96.5 0.0053 1.8E-07 57.8 7.3 84 43-182 2-89 (337)
291 1lnq_A MTHK channels, potassiu 96.4 0.0022 7.5E-08 60.4 4.5 37 43-86 115-151 (336)
292 1b7g_O Protein (glyceraldehyde 96.4 0.017 5.8E-07 55.1 10.5 98 43-182 1-99 (340)
293 4hb9_A Similarities with proba 96.4 0.0031 1.1E-07 59.4 5.3 35 43-83 1-35 (412)
294 1x13_A NAD(P) transhydrogenase 96.4 0.0031 1.1E-07 61.5 5.2 38 43-86 172-209 (401)
295 3dhn_A NAD-dependent epimerase 96.3 0.0091 3.1E-07 52.0 7.7 38 42-85 3-41 (227)
296 3qvo_A NMRA family protein; st 96.3 0.0097 3.3E-07 52.6 7.6 39 43-86 23-62 (236)
297 1ff9_A Saccharopine reductase; 96.3 0.0038 1.3E-07 61.7 5.4 38 43-86 3-40 (450)
298 1hye_A L-lactate/malate dehydr 96.3 0.016 5.3E-07 54.5 9.3 33 44-80 1-34 (313)
299 1zud_1 Adenylyltransferase THI 96.3 0.042 1.4E-06 49.9 11.9 34 44-82 29-62 (251)
300 1cf2_P Protein (glyceraldehyde 96.2 0.014 4.8E-07 55.6 9.0 36 43-83 1-37 (337)
301 1vl6_A Malate oxidoreductase; 96.1 0.018 6.2E-07 55.9 9.3 36 41-81 190-225 (388)
302 4g65_A TRK system potassium up 96.1 0.011 3.9E-07 58.5 8.0 54 27-87 219-272 (461)
303 3e8x_A Putative NAD-dependent 96.1 0.0092 3.2E-07 52.5 6.6 37 44-86 22-59 (236)
304 3pwz_A Shikimate dehydrogenase 96.1 0.011 3.8E-07 54.6 7.3 39 43-87 120-159 (272)
305 1l7d_A Nicotinamide nucleotide 96.1 0.0077 2.6E-07 58.1 6.4 39 42-86 171-209 (384)
306 1p77_A Shikimate 5-dehydrogena 96.1 0.0065 2.2E-07 55.8 5.6 65 15-87 93-157 (272)
307 1pjc_A Protein (L-alanine dehy 96.1 0.0056 1.9E-07 58.6 5.3 39 43-87 167-205 (361)
308 3kkj_A Amine oxidase, flavin-c 96.0 0.0058 2E-07 51.9 4.7 33 45-83 4-36 (336)
309 3tnl_A Shikimate dehydrogenase 96.0 0.011 3.9E-07 55.8 7.1 34 43-82 154-188 (315)
310 3rui_A Ubiquitin-like modifier 96.0 0.044 1.5E-06 52.4 11.1 34 44-82 35-68 (340)
311 3h2z_A Mannitol-1-phosphate 5- 96.0 0.005 1.7E-07 59.8 4.5 117 44-203 1-127 (382)
312 3c8m_A Homoserine dehydrogenas 96.0 0.029 1E-06 53.1 9.8 43 43-86 6-52 (331)
313 1ys4_A Aspartate-semialdehyde 95.9 0.024 8.1E-07 54.2 9.0 41 153-199 75-116 (354)
314 1leh_A Leucine dehydrogenase; 95.9 0.018 6.1E-07 55.6 8.0 44 36-85 166-209 (364)
315 3gpi_A NAD-dependent epimerase 95.9 0.0078 2.7E-07 54.5 5.0 36 43-84 3-38 (286)
316 1nyt_A Shikimate 5-dehydrogena 95.8 0.013 4.4E-07 53.7 6.4 65 15-87 93-157 (271)
317 2ozp_A N-acetyl-gamma-glutamyl 95.8 0.032 1.1E-06 53.2 9.3 37 158-200 66-102 (345)
318 1xyg_A Putative N-acetyl-gamma 95.8 0.017 5.8E-07 55.5 7.5 33 44-81 17-50 (359)
319 1y7t_A Malate dehydrogenase; N 95.8 0.02 6.8E-07 53.7 7.8 39 42-82 3-45 (327)
320 2ejw_A HDH, homoserine dehydro 95.7 0.012 4.2E-07 56.0 6.0 23 43-65 3-25 (332)
321 1j5p_A Aspartate dehydrogenase 95.6 0.022 7.7E-07 52.2 7.2 46 149-200 49-94 (253)
322 3ius_A Uncharacterized conserv 95.6 0.013 4.4E-07 52.9 5.4 38 43-86 5-42 (286)
323 1tt5_B Ubiquitin-activating en 95.6 0.091 3.1E-06 51.8 11.8 34 44-82 41-74 (434)
324 3t4e_A Quinate/shikimate dehyd 95.5 0.019 6.5E-07 54.2 6.5 35 43-83 148-183 (312)
325 3ew7_A LMO0794 protein; Q8Y8U8 95.5 0.015 5E-07 50.1 5.2 36 44-85 1-37 (221)
326 3ond_A Adenosylhomocysteinase; 95.5 0.025 8.5E-07 56.6 7.5 48 30-84 253-300 (488)
327 2x4g_A Nucleoside-diphosphate- 95.5 0.018 6.2E-07 53.1 6.0 37 43-85 13-50 (342)
328 1y8q_A Ubiquitin-like 1 activa 95.4 0.16 5.3E-06 48.4 12.6 51 27-82 17-70 (346)
329 2nqt_A N-acetyl-gamma-glutamyl 95.4 0.035 1.2E-06 53.3 7.9 39 156-201 76-114 (352)
330 3e48_A Putative nucleoside-dip 95.4 0.024 8.3E-07 51.2 6.5 38 44-86 1-39 (289)
331 3vh1_A Ubiquitin-like modifier 95.3 0.14 4.7E-06 52.4 12.3 34 44-82 328-361 (598)
332 4gsl_A Ubiquitin-like modifier 95.3 0.095 3.3E-06 53.8 11.1 34 44-82 327-360 (615)
333 2bka_A CC3, TAT-interacting pr 95.3 0.03 1E-06 49.1 6.5 37 44-86 19-58 (242)
334 3dfz_A SIRC, precorrin-2 dehyd 95.3 0.045 1.5E-06 49.2 7.7 35 42-82 30-64 (223)
335 3h2s_A Putative NADH-flavin re 95.2 0.018 6.1E-07 49.9 4.6 36 44-85 1-37 (224)
336 3v76_A Flavoprotein; structura 95.1 0.017 5.8E-07 56.3 4.8 36 43-84 27-62 (417)
337 3mtj_A Homoserine dehydrogenas 95.1 0.065 2.2E-06 53.0 9.0 45 150-200 66-113 (444)
338 2c5a_A GDP-mannose-3', 5'-epim 95.1 0.016 5.3E-07 55.0 4.3 48 30-84 17-65 (379)
339 1ryi_A Glycine oxidase; flavop 95.1 0.019 6.5E-07 53.8 4.9 40 37-82 11-50 (382)
340 2ep5_A 350AA long hypothetical 95.1 0.1 3.5E-06 49.7 10.1 36 158-199 75-110 (350)
341 3rp8_A Flavoprotein monooxygen 95.1 0.023 8E-07 54.1 5.6 36 42-83 22-57 (407)
342 1edz_A 5,10-methylenetetrahydr 95.0 0.021 7.3E-07 54.1 5.1 36 43-84 177-213 (320)
343 3i6i_A Putative leucoanthocyan 95.0 0.025 8.6E-07 52.7 5.6 34 43-82 10-44 (346)
344 3eag_A UDP-N-acetylmuramate:L- 95.0 0.045 1.6E-06 51.4 7.2 36 42-83 3-39 (326)
345 4b4o_A Epimerase family protei 95.0 0.026 8.9E-07 51.4 5.4 35 44-84 1-36 (298)
346 2xdo_A TETX2 protein; tetracyc 94.9 0.029 9.8E-07 53.5 5.7 36 42-83 25-60 (398)
347 3ing_A Homoserine dehydrogenas 94.9 0.053 1.8E-06 51.4 7.4 39 160-201 82-121 (325)
348 2gas_A Isoflavone reductase; N 94.9 0.03 1E-06 50.9 5.5 34 43-82 2-36 (307)
349 2ywl_A Thioredoxin reductase r 94.9 0.03 1E-06 47.0 5.2 35 43-83 1-35 (180)
350 2yyy_A Glyceraldehyde-3-phosph 94.8 0.14 4.6E-06 48.9 10.2 35 44-83 3-38 (343)
351 3pwk_A Aspartate-semialdehyde 94.7 0.078 2.7E-06 51.1 8.1 38 157-200 61-98 (366)
352 3h5n_A MCCB protein; ubiquitin 94.7 0.21 7.1E-06 47.7 11.1 34 44-82 119-152 (353)
353 3h8v_A Ubiquitin-like modifier 94.7 0.42 1.4E-05 44.5 12.8 34 44-82 37-70 (292)
354 2r6j_A Eugenol synthase 1; phe 94.7 0.072 2.5E-06 48.8 7.5 34 44-83 12-46 (318)
355 2ph5_A Homospermidine synthase 94.7 0.096 3.3E-06 52.2 8.8 40 43-84 13-52 (480)
356 1qyd_A Pinoresinol-lariciresin 94.7 0.052 1.8E-06 49.4 6.5 35 43-83 4-39 (313)
357 1qyc_A Phenylcoumaran benzylic 94.6 0.044 1.5E-06 49.7 5.8 35 43-83 4-39 (308)
358 3qj4_A Renalase; FAD/NAD(P)-bi 94.6 0.03 1E-06 52.0 4.7 34 43-82 1-37 (342)
359 3m2p_A UDP-N-acetylglucosamine 94.5 0.052 1.8E-06 49.6 6.2 34 44-83 3-37 (311)
360 3c1o_A Eugenol synthase; pheny 94.5 0.052 1.8E-06 49.7 6.2 34 43-82 4-38 (321)
361 1vkn_A N-acetyl-gamma-glutamyl 94.4 0.11 3.8E-06 49.8 8.4 101 41-202 11-112 (351)
362 2a9f_A Putative malic enzyme ( 94.4 0.06 2.1E-06 52.4 6.6 37 40-82 185-222 (398)
363 3hsk_A Aspartate-semialdehyde 94.4 0.1 3.4E-06 50.6 8.2 39 157-201 90-128 (381)
364 3ihm_A Styrene monooxygenase A 94.4 0.031 1.1E-06 54.2 4.7 33 44-82 23-55 (430)
365 3oz2_A Digeranylgeranylglycero 94.4 0.033 1.1E-06 51.8 4.7 32 46-83 7-38 (397)
366 1ebf_A Homoserine dehydrogenas 94.4 0.049 1.7E-06 52.3 5.9 24 42-65 3-26 (358)
367 3tum_A Shikimate dehydrogenase 94.4 0.11 3.7E-06 47.9 8.0 67 14-87 98-164 (269)
368 3ruf_A WBGU; rossmann fold, UD 94.4 0.071 2.4E-06 49.4 6.8 36 43-84 25-61 (351)
369 4dpl_A Malonyl-COA/succinyl-CO 94.3 0.098 3.3E-06 50.2 7.9 39 157-201 76-114 (359)
370 4dpk_A Malonyl-COA/succinyl-CO 94.3 0.098 3.3E-06 50.2 7.9 39 157-201 76-114 (359)
371 1hdo_A Biliverdin IX beta redu 94.3 0.051 1.7E-06 46.0 5.3 36 44-85 4-40 (206)
372 3slg_A PBGP3 protein; structur 94.3 0.044 1.5E-06 51.4 5.3 40 42-86 23-63 (372)
373 2qa1_A PGAE, polyketide oxygen 94.3 0.026 9E-07 56.1 3.9 35 44-84 12-46 (500)
374 3dqp_A Oxidoreductase YLBE; al 94.3 0.037 1.3E-06 48.0 4.4 36 44-85 1-37 (219)
375 1c0p_A D-amino acid oxidase; a 94.3 0.055 1.9E-06 50.6 5.9 33 43-81 6-38 (363)
376 3f8d_A Thioredoxin reductase ( 94.3 0.048 1.7E-06 49.3 5.3 33 43-81 15-47 (323)
377 1yvv_A Amine oxidase, flavin-c 94.2 0.041 1.4E-06 50.4 4.8 33 44-82 3-35 (336)
378 2csu_A 457AA long hypothetical 94.1 0.13 4.3E-06 50.9 8.4 46 152-202 56-101 (457)
379 3nrn_A Uncharacterized protein 94.1 0.048 1.7E-06 52.1 5.1 33 44-82 1-33 (421)
380 2nvu_B Maltose binding protein 94.1 0.26 9E-06 51.8 11.2 34 44-82 412-445 (805)
381 1y8q_B Anthracycline-, ubiquit 93.9 0.63 2.1E-05 48.0 13.3 34 44-82 18-51 (640)
382 2r00_A Aspartate-semialdehyde 93.8 0.16 5.3E-06 48.2 8.1 34 43-79 3-37 (336)
383 2e4g_A Tryptophan halogenase; 93.8 0.069 2.4E-06 53.6 5.9 35 42-82 24-61 (550)
384 3tz6_A Aspartate-semialdehyde 93.8 0.19 6.4E-06 48.0 8.6 38 157-200 60-97 (344)
385 3ka7_A Oxidoreductase; structu 93.8 0.058 2E-06 51.4 5.0 33 44-82 1-33 (425)
386 3itj_A Thioredoxin reductase 1 93.7 0.049 1.7E-06 49.7 4.3 35 42-82 21-55 (338)
387 3dje_A Fructosyl amine: oxygen 93.7 0.072 2.5E-06 51.1 5.6 35 43-83 6-41 (438)
388 3dme_A Conserved exported prot 93.7 0.065 2.2E-06 49.4 5.1 33 44-82 5-37 (369)
389 4dgk_A Phytoene dehydrogenase; 93.7 0.043 1.5E-06 53.6 4.0 34 43-82 1-34 (501)
390 2vou_A 2,6-dihydroxypyridine h 93.7 0.068 2.3E-06 50.8 5.3 35 43-83 5-39 (397)
391 3h8l_A NADH oxidase; membrane 93.5 0.07 2.4E-06 50.9 5.1 35 43-83 1-38 (409)
392 2gv8_A Monooxygenase; FMO, FAD 93.5 0.076 2.6E-06 51.5 5.5 34 43-82 6-41 (447)
393 2gf3_A MSOX, monomeric sarcosi 93.5 0.074 2.5E-06 49.8 5.2 33 44-82 4-36 (389)
394 3alj_A 2-methyl-3-hydroxypyrid 93.4 0.08 2.7E-06 49.9 5.3 35 43-83 11-45 (379)
395 3ppi_A 3-hydroxyacyl-COA dehyd 93.4 0.073 2.5E-06 48.1 4.8 37 44-86 31-68 (281)
396 3ngx_A Bifunctional protein fo 93.3 0.13 4.4E-06 47.7 6.4 32 44-81 151-183 (276)
397 2b0j_A 5,10-methenyltetrahydro 93.3 0.72 2.5E-05 43.1 11.2 165 144-327 125-302 (358)
398 1y56_B Sarcosine oxidase; dehy 93.3 0.078 2.7E-06 49.6 5.0 34 43-82 5-38 (382)
399 3fbs_A Oxidoreductase; structu 93.1 0.097 3.3E-06 46.7 5.1 33 44-82 3-35 (297)
400 3nix_A Flavoprotein/dehydrogen 93.1 0.074 2.5E-06 50.5 4.6 33 44-82 6-38 (421)
401 2uzz_A N-methyl-L-tryptophan o 93.1 0.07 2.4E-06 49.7 4.3 33 44-82 3-35 (372)
402 2oln_A NIKD protein; flavoprot 93.0 0.087 3E-06 49.8 4.9 33 44-82 5-37 (397)
403 2x3n_A Probable FAD-dependent 93.0 0.085 2.9E-06 49.9 4.8 35 43-83 6-40 (399)
404 2q7v_A Thioredoxin reductase; 93.0 0.09 3.1E-06 48.1 4.9 33 43-81 8-40 (325)
405 3oh8_A Nucleoside-diphosphate 93.0 0.14 4.7E-06 51.0 6.5 36 43-84 147-183 (516)
406 3p2o_A Bifunctional protein fo 93.0 0.2 6.8E-06 46.7 7.1 32 44-81 161-193 (285)
407 3cgv_A Geranylgeranyl reductas 92.9 0.09 3.1E-06 49.2 4.9 34 44-83 5-38 (397)
408 3r9u_A Thioredoxin reductase; 92.9 0.095 3.2E-06 47.2 4.8 34 42-81 3-37 (315)
409 3pzr_A Aspartate-semialdehyde 92.9 0.66 2.3E-05 44.6 10.9 41 153-200 58-100 (370)
410 1k0i_A P-hydroxybenzoate hydro 92.9 0.088 3E-06 49.7 4.7 34 44-83 3-36 (394)
411 3c96_A Flavin-containing monoo 92.8 0.1 3.5E-06 49.7 5.2 34 44-83 5-39 (410)
412 1a4i_A Methylenetetrahydrofola 92.8 0.21 7.3E-06 46.8 7.1 32 43-80 165-197 (301)
413 2bi7_A UDP-galactopyranose mut 92.8 0.11 3.7E-06 49.7 5.2 34 44-83 4-37 (384)
414 2bry_A NEDD9 interacting prote 92.7 0.16 5.5E-06 50.3 6.5 37 41-83 90-126 (497)
415 1sb8_A WBPP; epimerase, 4-epim 92.7 0.12 4.1E-06 48.0 5.3 49 26-83 13-62 (352)
416 4gx0_A TRKA domain protein; me 92.7 0.11 3.7E-06 52.3 5.3 41 41-87 125-165 (565)
417 3l07_A Bifunctional protein fo 92.7 0.22 7.5E-06 46.4 7.0 31 44-80 162-193 (285)
418 2r0c_A REBC; flavin adenine di 92.7 0.089 3E-06 52.8 4.6 36 43-84 26-61 (549)
419 1u8f_O GAPDH, glyceraldehyde-3 92.7 0.25 8.6E-06 46.8 7.5 22 44-65 4-25 (335)
420 1b0a_A Protein (fold bifunctio 92.6 0.17 5.9E-06 47.2 6.2 33 43-81 159-192 (288)
421 2vdc_G Glutamate synthase [NAD 92.6 0.18 6.2E-06 49.6 6.7 36 42-83 121-156 (456)
422 3nks_A Protoporphyrinogen oxid 92.6 0.099 3.4E-06 50.6 4.7 33 44-82 3-37 (477)
423 1nvt_A Shikimate 5'-dehydrogen 92.6 0.12 4.2E-06 47.4 5.1 64 15-87 102-165 (287)
424 3d7l_A LIN1944 protein; APC893 92.6 0.14 4.7E-06 43.6 5.2 35 42-83 2-37 (202)
425 1t4b_A Aspartate-semialdehyde 92.5 0.67 2.3E-05 44.5 10.4 41 153-200 59-101 (367)
426 4a26_A Putative C-1-tetrahydro 92.5 0.17 6E-06 47.4 6.1 32 44-81 166-198 (300)
427 1mo9_A ORF3; nucleotide bindin 92.5 0.17 5.7E-06 50.4 6.4 35 42-82 42-76 (523)
428 3ko8_A NAD-dependent epimerase 92.5 0.14 4.9E-06 46.4 5.4 36 44-85 1-37 (312)
429 2qa2_A CABE, polyketide oxygen 92.4 0.13 4.4E-06 51.0 5.4 36 43-84 12-47 (499)
430 3cmm_A Ubiquitin-activating en 92.4 0.4 1.4E-05 52.0 9.5 55 27-82 406-464 (1015)
431 3lk7_A UDP-N-acetylmuramoylala 92.3 0.13 4.5E-06 50.4 5.3 35 43-83 9-43 (451)
432 3vps_A TUNA, NAD-dependent epi 92.3 0.14 4.7E-06 46.4 5.1 35 43-83 7-42 (321)
433 2hjs_A USG-1 protein homolog; 92.2 0.31 1.1E-05 46.2 7.6 23 43-65 6-29 (340)
434 3d1c_A Flavin-containing putat 92.2 0.13 4.3E-06 47.8 4.8 33 44-82 5-38 (369)
435 3g3e_A D-amino-acid oxidase; F 92.2 0.13 4.6E-06 47.6 4.9 38 44-82 1-39 (351)
436 2dkn_A 3-alpha-hydroxysteroid 92.2 0.17 5.7E-06 44.3 5.2 36 44-85 2-38 (255)
437 3k7m_X 6-hydroxy-L-nicotine ox 92.2 0.13 4.4E-06 49.1 4.8 33 44-82 2-34 (431)
438 3nkl_A UDP-D-quinovosamine 4-d 92.2 1.2 4.1E-05 35.6 10.1 36 42-82 3-39 (141)
439 2zbw_A Thioredoxin reductase; 92.1 0.15 5.2E-06 46.6 5.1 35 43-83 5-39 (335)
440 1tt5_A APPBP1, amyloid protein 92.1 1.3 4.4E-05 44.6 12.3 50 28-82 14-66 (531)
441 2aqj_A Tryptophan halogenase, 92.1 0.15 5.1E-06 50.8 5.4 34 43-82 5-41 (538)
442 2weu_A Tryptophan 5-halogenase 92.0 0.11 3.9E-06 51.1 4.4 33 44-82 3-38 (511)
443 2jl1_A Triphenylmethane reduct 92.0 0.089 3.1E-06 47.2 3.3 37 44-85 1-39 (287)
444 3fmw_A Oxygenase; mithramycin, 92.0 0.13 4.3E-06 52.2 4.8 34 44-83 50-83 (570)
445 3lzw_A Ferredoxin--NADP reduct 92.0 0.14 4.7E-06 46.5 4.6 35 43-83 7-41 (332)
446 1kyq_A Met8P, siroheme biosynt 92.0 0.33 1.1E-05 44.9 7.2 34 43-82 13-46 (274)
447 2dvm_A Malic enzyme, 439AA lon 92.0 0.24 8.3E-06 48.8 6.6 32 44-81 187-225 (439)
448 4a9w_A Monooxygenase; baeyer-v 91.9 0.14 4.9E-06 46.7 4.7 34 44-83 4-37 (357)
449 2rgh_A Alpha-glycerophosphate 91.9 0.19 6.6E-06 50.7 6.1 34 43-82 32-65 (571)
450 4id9_A Short-chain dehydrogena 91.9 0.15 5.2E-06 47.0 4.9 36 42-83 18-54 (347)
451 2c20_A UDP-glucose 4-epimerase 91.9 0.18 6.3E-06 46.0 5.4 35 43-83 1-36 (330)
452 3uw3_A Aspartate-semialdehyde 91.9 0.8 2.8E-05 44.2 10.1 41 153-200 62-104 (377)
453 4a5o_A Bifunctional protein fo 91.9 0.28 9.7E-06 45.6 6.6 31 44-80 162-193 (286)
454 1xg5_A ARPG836; short chain de 91.6 0.16 5.3E-06 45.9 4.5 37 44-86 33-70 (279)
455 3nyc_A D-arginine dehydrogenas 91.6 0.12 4.2E-06 47.9 3.9 33 43-82 9-41 (381)
456 2iid_A L-amino-acid oxidase; f 91.6 0.3 1E-05 47.6 6.9 35 42-82 32-66 (498)
457 3o38_A Short chain dehydrogena 91.6 0.1 3.4E-06 46.8 3.2 38 43-86 22-61 (266)
458 2pyx_A Tryptophan halogenase; 91.6 0.15 5.2E-06 50.6 4.8 35 42-82 6-52 (526)
459 2b69_A UDP-glucuronate decarbo 91.5 0.22 7.5E-06 46.0 5.5 36 42-83 26-62 (343)
460 3ab1_A Ferredoxin--NADP reduct 91.4 0.2 6.8E-06 46.6 5.1 35 43-83 14-48 (360)
461 3cmm_A Ubiquitin-activating en 91.4 0.82 2.8E-05 49.6 10.5 34 44-82 28-61 (1015)
462 4eso_A Putative oxidoreductase 91.4 0.25 8.5E-06 44.2 5.6 38 44-87 9-47 (255)
463 3rkr_A Short chain oxidoreduct 91.4 0.21 7.1E-06 44.7 5.0 39 43-87 29-68 (262)
464 2o7s_A DHQ-SDH PR, bifunctiona 91.2 0.2 6.8E-06 50.2 5.3 37 44-86 365-401 (523)
465 2q0l_A TRXR, thioredoxin reduc 91.2 0.19 6.6E-06 45.4 4.7 32 44-81 2-34 (311)
466 2i0z_A NAD(FAD)-utilizing dehy 91.1 0.19 6.6E-06 48.8 4.9 34 44-83 27-60 (447)
467 3guy_A Short-chain dehydrogena 91.0 0.19 6.3E-06 44.0 4.3 37 44-86 2-39 (230)
468 3i3l_A Alkylhalidase CMLS; fla 91.0 0.23 7.9E-06 50.5 5.5 33 44-82 24-56 (591)
469 1yxm_A Pecra, peroxisomal tran 91.0 0.25 8.5E-06 44.9 5.2 37 44-86 19-56 (303)
470 2jae_A L-amino acid oxidase; o 91.0 0.28 9.6E-06 47.7 5.9 34 43-82 11-44 (489)
471 4dry_A 3-oxoacyl-[acyl-carrier 91.0 0.18 6E-06 46.0 4.2 38 44-87 34-72 (281)
472 1vdc_A NTR, NADPH dependent th 91.0 0.12 4E-06 47.4 3.0 31 44-80 9-39 (333)
473 2e1m_A L-glutamate oxidase; L- 90.9 0.27 9.1E-06 47.4 5.6 34 42-81 43-76 (376)
474 2zcu_A Uncharacterized oxidore 90.9 0.52 1.8E-05 41.9 7.3 36 45-85 1-38 (286)
475 1lu9_A Methylene tetrahydromet 90.9 0.24 8.1E-06 45.3 5.0 37 44-86 120-157 (287)
476 1dxl_A Dihydrolipoamide dehydr 90.8 0.25 8.6E-06 48.0 5.4 35 42-82 5-39 (470)
477 3sx6_A Sulfide-quinone reducta 90.8 0.21 7.2E-06 48.3 4.8 36 43-84 4-42 (437)
478 3c4a_A Probable tryptophan hyd 90.8 0.24 8.1E-06 46.8 5.1 35 44-83 1-36 (381)
479 3h28_A Sulfide-quinone reducta 90.8 0.24 8.3E-06 47.6 5.3 35 44-84 3-39 (430)
480 2q1w_A Putative nucleotide sug 90.8 0.29 9.8E-06 45.2 5.5 35 43-83 21-56 (333)
481 3pvc_A TRNA 5-methylaminomethy 90.7 0.23 7.9E-06 51.2 5.3 34 43-82 264-297 (689)
482 1rpn_A GDP-mannose 4,6-dehydra 90.7 0.28 9.7E-06 44.8 5.4 37 42-84 13-50 (335)
483 3ihg_A RDME; flavoenzyme, anth 90.6 0.24 8.3E-06 49.1 5.2 34 44-83 6-39 (535)
484 3ioy_A Short-chain dehydrogena 90.6 0.29 1E-05 45.4 5.5 39 43-87 8-47 (319)
485 2z1m_A GDP-D-mannose dehydrata 90.6 0.26 9E-06 45.0 5.1 36 44-85 4-40 (345)
486 3enk_A UDP-glucose 4-epimerase 90.6 0.33 1.1E-05 44.5 5.8 39 42-86 4-43 (341)
487 2ivd_A PPO, PPOX, protoporphyr 90.5 0.2 6.9E-06 48.5 4.4 35 42-82 15-49 (478)
488 1o5i_A 3-oxoacyl-(acyl carrier 90.5 0.28 9.7E-06 43.6 5.1 35 43-83 19-54 (249)
489 3two_A Mannitol dehydrogenase; 90.5 0.54 1.8E-05 44.0 7.3 37 44-86 178-214 (348)
490 1vm6_A DHPR, dihydrodipicolina 90.5 2.1 7.2E-05 38.4 10.7 62 160-240 53-114 (228)
491 2a87_A TRXR, TR, thioredoxin r 90.5 0.21 7.2E-06 46.0 4.3 34 42-81 13-46 (335)
492 3cty_A Thioredoxin reductase; 90.4 0.28 9.7E-06 44.6 5.1 32 44-81 17-48 (319)
493 1n7h_A GDP-D-mannose-4,6-dehyd 90.4 0.29 9.9E-06 45.9 5.3 35 44-84 29-64 (381)
494 3tjr_A Short chain dehydrogena 90.4 0.34 1.2E-05 44.4 5.7 39 43-87 31-70 (301)
495 1orr_A CDP-tyvelose-2-epimeras 90.4 0.29 1E-05 44.8 5.2 34 43-82 1-35 (347)
496 2xve_A Flavin-containing monoo 90.4 0.25 8.7E-06 48.4 5.0 34 44-83 3-42 (464)
497 1y0p_A Fumarate reductase flav 90.3 0.31 1.1E-05 49.0 5.7 35 43-83 126-160 (571)
498 1y1p_A ARII, aldehyde reductas 90.3 0.25 8.6E-06 45.1 4.6 37 43-85 11-48 (342)
499 4fgs_A Probable dehydrogenase 90.3 0.26 8.9E-06 45.4 4.7 52 21-86 15-67 (273)
500 3rih_A Short chain dehydrogena 90.3 0.39 1.3E-05 44.1 6.0 38 44-87 42-80 (293)
No 1
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4e-46 Score=365.55 Aligned_cols=261 Identities=23% Similarity=0.340 Sum_probs=201.7
Q ss_pred ccccccchHHhhhHHHHhhc-cCCCCCceEEEECCCHHHHHHHHHHHHhcCC---CCCCeeEEEEecCCcchhhhhhhhH
Q 019978 18 IHHTNGSLEERLDELRRLMG-KAEGDPLRIVGVGAGAWGSVFTAMLQDSYGY---LRDKVLIRIWRRPGRSVDRATAEHL 93 (333)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~kI~IIGaG~mG~alA~~La~~~G~---~~~~~~V~l~~r~~~~~~~~~~~~l 93 (333)
+.||++.++-+-+....-.. .+...+.||+|||+|+||++||..|+++ |. ....++|++|.|+++... +.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~KI~ViGaGsWGTALA~~la~n-g~~~~~~~~~~V~lw~r~~e~~~----~~~ 82 (391)
T 4fgw_A 8 LNLTSGHLNAGRKRSSSSVSLKAAEKPFKVTVIGSGNWGTTIAKVVAEN-CKGYPEVFAPIVQMWVFEEEING----EKL 82 (391)
T ss_dssp -------------------------CCEEEEEECCSHHHHHHHHHHHHH-HHHCTTTEEEEEEEECCCCBSSS----CBH
T ss_pred HHHHhhhhccccccccccccccccCCCCeEEEECcCHHHHHHHHHHHHc-CCCccccCCceEEEEEcchHhhh----HHH
Confidence 45566666544332222222 2233467999999999999999999998 61 000025999999987533 233
Q ss_pred HHHHhhhhhHHHHhhhcccccchhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhH
Q 019978 94 FEVINSREDVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTET 173 (333)
Q Consensus 94 ~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~ 173 (333)
.+.|+..+ +|++|+|++ +|| .++.+++|++++++++|+||++||++++
T Consensus 83 ~e~in~~~-------~N~~YLpgv-------~Lp------------------~~i~~t~dl~~al~~ad~ii~avPs~~~ 130 (391)
T 4fgw_A 83 TEIINTRH-------QNVKYLPGI-------TLP------------------DNLVANPDLIDSVKDVDIIVFNIPHQFL 130 (391)
T ss_dssp HHHHTTTC-------CBTTTBTTC-------CCC------------------SSEEEESCHHHHHTTCSEEEECSCGGGH
T ss_pred HHHHHhcC-------cCcccCCCC-------cCC------------------CCcEEeCCHHHHHhcCCEEEEECChhhh
Confidence 44566554 589999875 454 2799999999999999999999999999
Q ss_pred HHHHHHHHhhhhccCCCCEEEEeeecCcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhccCceeEEEe-C
Q 019978 174 KEVFEEISRYWKERITVPVIISLAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARIC-G 252 (333)
Q Consensus 174 ~~vl~~i~~~l~~~~~~~~Ivs~~kGi~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~~~~~~~~~~-~ 252 (333)
+++++++++++++ ++++|+++||++..+ +..+++++++.+.++. ++++++||+||.|++++.|+.++++ .
T Consensus 131 r~~l~~l~~~~~~---~~~iv~~~KGie~~~---~~~~~~se~i~e~~~~---~~~vLsGPs~A~EVa~~~pta~~iA~~ 201 (391)
T 4fgw_A 131 PRICSQLKGHVDS---HVRAISCLKGFEVGA---KGVQLLSSYITEELGI---QCGALSGANIATEVAQEHWSETTVAYH 201 (391)
T ss_dssp HHHHHHHTTTSCT---TCEEEECCCSCEEET---TEEECHHHHHHHHHCC---EEEEEECSCCHHHHHTTCCEEEEEECC
T ss_pred HHHHHHhccccCC---CceeEEecccccccc---ccchhHHHHHHHHhCc---cceeccCCchHHHhhcCCCceEEEEec
Confidence 9999999999987 789999999998753 1347899999998873 5889999999999999999887653 2
Q ss_pred C---------hhhHHHHHHHhCCCCeEEEecCChhHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHH-
Q 019978 253 A---------EKWRKPLAKFLRRPHFTVWDNGDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVVM- 322 (333)
Q Consensus 253 ~---------~~~~~~l~~ll~~~~~~v~~s~Di~gve~~~alkNv~Ai~~Gi~~gl~~~~~n~~~~l~~~~~~E~~~l- 322 (333)
+ +...+.++++|++++|++|.++|++|+|+||+|||||||++||++|+++ |+|++++|++|+++||..+
T Consensus 202 ~~~~~~~~~~~~~a~~~~~lf~~~~frvy~s~DviGvElgGAlKNViAIAaGi~dGlg~-G~NakAALitrGl~Em~rlg 280 (391)
T 4fgw_A 202 IPKDFRGEGKDVDHKVLKALFHRPYFHVSVIEDVAGISICGALKNVVALGCGFVEGLGW-GNNASAAIQRVGLGEIIRFG 280 (391)
T ss_dssp CCTTCCCSSSSCCHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHHHHH
T ss_pred ChhhhhhhhHHHHHHHHHHHhCCCCEEEEEeCCccceehHHHHHHHHHHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHH
Confidence 2 1247889999999999999999999999999999999999999999999 7999999999999999999
Q ss_pred HHC
Q 019978 323 HGM 325 (333)
Q Consensus 323 ~~~ 325 (333)
.+|
T Consensus 281 ~al 283 (391)
T 4fgw_A 281 QMF 283 (391)
T ss_dssp HHH
T ss_pred HHH
Confidence 888
No 2
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=100.00 E-value=2.2e-39 Score=314.81 Aligned_cols=230 Identities=21% Similarity=0.335 Sum_probs=203.1
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
.+|||+|||+|+||+++|..|+++ | ++|++|+|+++++++++.++ .|+.|+++.
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~-G-----~~V~l~~r~~~~~~~i~~~~----------------~~~~~l~g~---- 81 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARK-G-----QKVRLWSYESDHVDEMQAEG----------------VNNRYLPNY---- 81 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTT-T-----CCEEEECSCHHHHHHHHHHS----------------SBTTTBTTC----
T ss_pred cCCeEEEECccHHHHHHHHHHHHC-C-----CeEEEEeCCHHHHHHHHHcC----------------CCcccCCCC----
Confidence 358999999999999999999999 8 99999999988766543322 355676653
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCc
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~ 201 (333)
.++ .++.+++|++++++++|+||++||+++++++++++.+++++ +++||+++||++
T Consensus 82 ---~l~------------------~~i~~t~d~~ea~~~aDvVilaVp~~~~~~vl~~i~~~l~~---~~ivvs~~kGi~ 137 (356)
T 3k96_A 82 ---PFP------------------ETLKAYCDLKASLEGVTDILIVVPSFAFHEVITRMKPLIDA---KTRIAWGTKGLA 137 (356)
T ss_dssp ---CCC------------------TTEEEESCHHHHHTTCCEEEECCCHHHHHHHHHHHGGGCCT---TCEEEECCCSCB
T ss_pred ---ccC------------------CCeEEECCHHHHHhcCCEEEECCCHHHHHHHHHHHHHhcCC---CCEEEEEeCCCC
Confidence 232 26888999999999999999999999999999999999987 789999999999
Q ss_pred ccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhccCceeEEE-eCChhhHHHHHHHhCCCCeEEEecCChhHH
Q 019978 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARI-CGAEKWRKPLAKFLRRPHFTVWDNGDLVTH 280 (333)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~~~~~~~~~-~~~~~~~~~l~~ll~~~~~~v~~s~Di~gv 280 (333)
++ + .++++++++.+|. .++++++||+++.++..+.++.+++ +.+++..+.++++|++.+|+++.++|++|+
T Consensus 138 ~~-----t-~~~se~i~~~l~~--~~~~vlsgP~~a~ev~~g~pt~~via~~~~~~~~~v~~lf~~~~~rv~~~~Di~g~ 209 (356)
T 3k96_A 138 KG-----S-RLLHEVVATELGQ--VPMAVISGPSLATEVAANLPTAVSLASNNSQFSKDLIERLHGQRFRVYKNDDMIGV 209 (356)
T ss_dssp TT-----T-BCHHHHHHHHHCS--CCEEEEESSCCHHHHHTTCCEEEEEEESCHHHHHHHHHHHCCSSEEEEEESCHHHH
T ss_pred cC-----c-cCHHHHHHHHcCC--CCEEEEECccHHHHHHcCCCeEEEEecCCHHHHHHHHHHhCCCCeeEEEeCCHHHH
Confidence 86 5 7899999999973 4588999999999999999887655 667788999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHH-HHCCCCCC
Q 019978 281 EVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVVM-HGMGRSWQ 330 (333)
Q Consensus 281 e~~~alkNv~Ai~~Gi~~gl~~~~~n~~~~l~~~~~~E~~~l-~~~G~~~~ 330 (333)
||+|++|||+|+++|+++|+++ ++|+++++++++++||..+ +++|++.+
T Consensus 210 e~~galkNviaia~G~~~gl~~-g~N~~aal~~~~l~E~~~l~~a~G~~~~ 259 (356)
T 3k96_A 210 ELCGSVKNILAIATGISDGLKL-GSNARAALITRGLTEMGRLVSVFGGKQE 259 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTC-CHHHHHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHHHHHHHHHhhccC-CchHHHHHHHHHHHHHHHHHHHhCCChH
Confidence 9999999999999999999999 7999999999999999999 99998753
No 3
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.97 E-value=2.2e-30 Score=251.81 Aligned_cols=235 Identities=23% Similarity=0.303 Sum_probs=189.2
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCC--CeeEEEEecCCc-----chhhhhhhhHHHHHhhhhhHHHHhhhcccccc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRD--KVLIRIWRRPGR-----SVDRATAEHLFEVINSREDVLRRLIRRCAYLK 115 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~--~~~V~l~~r~~~-----~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~ 115 (333)
+|||+|||+|+||+++|..|+++ |...+ .++|++|+|+++ +++.++.++ .+..|++
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~-G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~----------------~~~~~~~ 83 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTN-AKNNYLFENEVRMWIRDEFVNGERMVDIINNKH----------------ENTKYLK 83 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHH-HHHCTTBCSCEEEECCSCC---CCHHHHHHHHC----------------BCTTTST
T ss_pred CCEEEEECcCHHHHHHHHHHHHc-CCccCCCCCeEEEEECChhhhhHHHHHHHHhcC----------------cccccCC
Confidence 47999999999999999999988 51000 068999999987 544332211 1233443
Q ss_pred hhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHh----hhhccCCCC
Q 019978 116 YVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISR----YWKERITVP 191 (333)
Q Consensus 116 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~----~l~~~~~~~ 191 (333)
+. .++ .++.+++|++++++++|+||++||+++++++++++.+ ++++ ++
T Consensus 84 ~~-------~~~------------------~~i~~~~~~~ea~~~aDvVilav~~~~~~~vl~~i~~~~~~~l~~---~~ 135 (375)
T 1yj8_A 84 GV-------PLP------------------HNIVAHSDLASVINDADLLIFIVPCQYLESVLASIKESESIKIAS---HA 135 (375)
T ss_dssp TC-------BCC------------------TTEEEESSTHHHHTTCSEEEECCCHHHHHHHHHHHTC---CCCCT---TC
T ss_pred cc-------cCc------------------CCeEEECCHHHHHcCCCEEEEcCCHHHHHHHHHHHhhhhhccCCC---CC
Confidence 31 111 2577888988888999999999999999999999998 8876 78
Q ss_pred EEEEeeecCcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhccCceeEEE-eCChhhHHHHHHHhCCCCeE
Q 019978 192 VIISLAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARI-CGAEKWRKPLAKFLRRPHFT 270 (333)
Q Consensus 192 ~Ivs~~kGi~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~~~~~~~~~-~~~~~~~~~l~~ll~~~~~~ 270 (333)
+||+++||+.+.. .+...+++++.+.++ .+..++.||+++.++..+.++.+.. +.+++..+.++++|+..+++
T Consensus 136 ivvs~~~Gi~~~~---~~~~~l~~~l~~~~~---~~~~v~~gp~~a~~v~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~~ 209 (375)
T 1yj8_A 136 KAISLTKGFIVKK---NQMKLCSNYISDFLN---IPCSALSGANIAMDVAMENFSEATIGGNDKDSLVIWQRVFDLPYFK 209 (375)
T ss_dssp EEEECCCSCEEET---TEEECHHHHHHHHSS---SCEEEEECSCCHHHHHTTCCEEEEEECSCHHHHHHHHHHHCBTTEE
T ss_pred EEEEeCCccccCC---ccccCHHHHHHHHcC---CCEEEEeCCchHHHHHhCCCeEEEEecCCHHHHHHHHHHhCCCCeE
Confidence 9999999998730 024678888887765 3467899999999999888776555 45667889999999999999
Q ss_pred EEecCChhHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHH-HHCC--CCC
Q 019978 271 VWDNGDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVVM-HGMG--RSW 329 (333)
Q Consensus 271 v~~s~Di~gve~~~alkNv~Ai~~Gi~~gl~~~~~n~~~~l~~~~~~E~~~l-~~~G--~~~ 329 (333)
++.++|+.+++|++++||++++++|+++++++ ++|...+++.+++.|+..+ +++| .+.
T Consensus 210 ~~~~~di~~~~~~k~l~N~~~~~~g~~~~~~~-~~n~~~a~~~~~~~E~~~la~a~G~G~~~ 270 (375)
T 1yj8_A 210 INCVNETIEVEICGALKNIITLACGFCDGLNL-PTNSKSAIIRNGINEMILFGKVFFQKFNE 270 (375)
T ss_dssp EEEESCSHHHHHHHHHHHHHHHHHHHHHHTTC-CHHHHHHHHHHHHHHHHHHHHHHSSCCCG
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHHHHHhhccC-ChhHHHHHHHHHHHHHHHHHHHhccCCCc
Confidence 99999999999999999999999999999998 5788889999999999999 8994 654
No 4
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.96 E-value=2e-28 Score=235.12 Aligned_cols=233 Identities=24% Similarity=0.343 Sum_probs=186.0
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCC--CeeEEEEecCCc-----chhhhhhhhHHHHHhhhhhHHHHhhhcccccc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRD--KVLIRIWRRPGR-----SVDRATAEHLFEVINSREDVLRRLIRRCAYLK 115 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~--~~~V~l~~r~~~-----~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~ 115 (333)
+|||+|||+|+||+++|..|+++ |...+ +++|++|+|+++ +++.++..+ .+..+++
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~-g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~----------------~~~~~~~ 70 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGN-AAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQH----------------ENVKYLP 70 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-HHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHS----------------CCTTTST
T ss_pred CCeEEEECCCHHHHHHHHHHHhc-CCcccCCCCeEEEEEcChhhhhhHHHHHHHhcC----------------cccccCC
Confidence 47999999999999999999988 41000 068999999987 443322111 1122222
Q ss_pred hhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEE
Q 019978 116 YVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIIS 195 (333)
Q Consensus 116 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs 195 (333)
+. .++ .++.++++++++++++|+||+|||++.++++++++.+++++ +++||+
T Consensus 71 ~~-------~~~------------------~~~~~~~~~~~~~~~aD~Vilav~~~~~~~v~~~i~~~l~~---~~ivv~ 122 (354)
T 1x0v_A 71 GH-------KLP------------------PNVVAVPDVVQAAEDADILIFVVPHQFIGKICDQLKGHLKA---NATGIS 122 (354)
T ss_dssp TC-------CCC------------------TTEEEESSHHHHHTTCSEEEECCCGGGHHHHHHHHTTCSCT---TCEEEE
T ss_pred cc-------cCc------------------cCeEEEcCHHHHHcCCCEEEEeCCHHHHHHHHHHHHhhCCC---CCEEEE
Confidence 21 111 25777889988889999999999999999999999998876 789999
Q ss_pred eeecCcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhccCceeEEE-eCChhhHHHHHHHhCCCCeEEEec
Q 019978 196 LAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARI-CGAEKWRKPLAKFLRRPHFTVWDN 274 (333)
Q Consensus 196 ~~kGi~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~~~~~~~~~-~~~~~~~~~l~~ll~~~~~~v~~s 274 (333)
++||+..+. .+...+++.+.+.+| .+..++.||+++.++..+.++.++. +.+++..+.++++|+..+++++.+
T Consensus 123 ~~~Gi~~~~---~~~~~l~~~l~~~~~---~~~~v~~gp~~a~~v~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~~~~~~ 196 (354)
T 1x0v_A 123 LIKGVDEGP---NGLKLISEVIGERLG---IPMSVLMGANIASEVADEKFCETTIGCKDPAQGQLLKELMQTPNFRITVV 196 (354)
T ss_dssp CCCCBCSSS---SSCCBHHHHHHHHHT---CCEEEEECSCCHHHHHTTCCEEEEEECSSHHHHHHHHHHHCBTTEEEEEE
T ss_pred ECCccCCCC---CccccHHHHHHHHcC---CCEEEEECCCcHHHHHhcCCceEEEEECCHHHHHHHHHHhCCCCEEEEEc
Confidence 999998520 134677788887776 3467899999999998887765544 455678899999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHH-HHCCC
Q 019978 275 GDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVVM-HGMGR 327 (333)
Q Consensus 275 ~Di~gve~~~alkNv~Ai~~Gi~~gl~~~~~n~~~~l~~~~~~E~~~l-~~~G~ 327 (333)
+|+.+++|++++||++++++|++.++++ ++|...+++.++++|+..+ +++|.
T Consensus 197 ~di~~~~~~k~~~N~~~~~~g~~~~~~~-~~n~~~~~~~~~~~E~~~la~a~G~ 249 (354)
T 1x0v_A 197 QEVDTVEICGALKNVVAVGAGFCDGLGF-GDNTKAAVIRLGLMEMIAFAKLFCS 249 (354)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHTTC-CHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred CCchHhHHHHHHHHHHHHHHHHHHHccC-CccHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999998 5788889999999999999 89987
No 5
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.96 E-value=1.1e-28 Score=236.30 Aligned_cols=219 Identities=25% Similarity=0.432 Sum_probs=181.7
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
+|||+|||+|+||+++|..|+++ | ++|++|+|++++++.++.++ .+. ++++.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~-G-----~~V~~~~r~~~~~~~l~~~g----------------~~~-~~~~~----- 65 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHEN-G-----EEVILWARRKEIVDLINVSH----------------TSP-YVEES----- 65 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSHHHHHHHHHHS----------------CBT-TBTTC-----
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-C-----CeEEEEeCCHHHHHHHHHhC----------------Ccc-cCCCC-----
Confidence 48999999999999999999999 8 99999999987766543221 112 33321
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCcc
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~~ 202 (333)
. . ++.+++++++ ++++|+||++||+++++++++++.+ + +++||+++||+.+
T Consensus 66 --~-------------------~-~~~~~~~~~~-~~~aDvVil~vk~~~~~~v~~~l~~---~---~~~vv~~~nGi~~ 116 (335)
T 1z82_A 66 --K-------------------I-TVRATNDLEE-IKKEDILVIAIPVQYIREHLLRLPV---K---PSMVLNLSKGIEI 116 (335)
T ss_dssp --C-------------------C-CSEEESCGGG-CCTTEEEEECSCGGGHHHHHTTCSS---C---CSEEEECCCCCCT
T ss_pred --e-------------------e-eEEEeCCHHH-hcCCCEEEEECCHHHHHHHHHHhCc---C---CCEEEEEeCCCCC
Confidence 0 0 3667788888 8899999999999999999988776 4 6899999999998
Q ss_pred cccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhccCceeEEEeCChhhHHHHHHHhCCCCeEEEecCChhHHHH
Q 019978 203 ELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVTHEV 282 (333)
Q Consensus 203 ~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~s~Di~gve~ 282 (333)
+ +.+.+++++.+.++ ....++.||+++.++..+.++.+..++.+ .+.++++|+..+++++.++|+.+++|
T Consensus 117 ~-----~~~~l~~~~~~~~~---~~~~~~~~P~~~~~~~~g~~~~~~~g~~~--~~~~~~ll~~~g~~~~~~~di~~~~~ 186 (335)
T 1z82_A 117 K-----TGKRVSEIVEEILG---CPYAVLSGPSHAEEVAKKLPTAVTLAGEN--SKELQKRISTEYFRVYTCEDVVGVEI 186 (335)
T ss_dssp T-----TCCCHHHHHHHHTC---CCEEEEESSCCHHHHHTTCCEEEEEEETT--HHHHHHHHCCSSEEEEEESCHHHHHH
T ss_pred C-----ccCcHHHHHHHHcC---CceEEEECCccHHHHhCCCceEEEEEehh--HHHHHHHhCCCCEEEEecCchHHHHH
Confidence 6 34678888877665 34678999999999988877654444333 78999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHH-HHCCCCC
Q 019978 283 MGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVVM-HGMGRSW 329 (333)
Q Consensus 283 ~~alkNv~Ai~~Gi~~gl~~~~~n~~~~l~~~~~~E~~~l-~~~G~~~ 329 (333)
++++||++++++|++.++++ ++|...+++..++.|+..+ +++|.+.
T Consensus 187 ~k~l~N~~~~~~g~~~g~~~-~~n~~~a~~~~~~~E~~~la~a~G~~~ 233 (335)
T 1z82_A 187 AGALKNVIAIAAGILDGFGG-WDNAKAALETRGIYEIARFGMFFGADQ 233 (335)
T ss_dssp HHHHHHHHHHHHHHHHHTTC-CHHHHHHHHHHHHHHHHHHHHHTTCCH
T ss_pred HHHHHhHHHHHHHHHhcCCC-CchhHHHHHHHHHHHHHHHHHHhCCCh
Confidence 99999999999999999988 5888889999999999999 9999875
No 6
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.96 E-value=2.1e-27 Score=229.49 Aligned_cols=229 Identities=21% Similarity=0.366 Sum_probs=187.8
Q ss_pred eEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcCC
Q 019978 45 RIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDR 124 (333)
Q Consensus 45 kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~ 124 (333)
||+|||+|+||+++|..|+++ | ++|++|+|+++++++++..+ .+..++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~-G-----~~V~~~~r~~~~~~~l~~~~----------------~~~~~~~~~------- 67 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKK-C-----REVCVWHMNEEEVRLVNEKR----------------ENVLFLKGV------- 67 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-E-----EEEEEECSCHHHHHHHHHHT----------------BCTTTSTTC-------
T ss_pred eEEEECCCHHHHHHHHHHHhC-C-----CEEEEEECCHHHHHHHHHcC----------------ccccccccc-------
Confidence 999999999999999999998 8 99999999987765443211 122233221
Q ss_pred cccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHH----HHhhhhccCCCCEEEEeeecC
Q 019978 125 TLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEE----ISRYWKERITVPVIISLAKGV 200 (333)
Q Consensus 125 ~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~----i~~~l~~~~~~~~Ivs~~kGi 200 (333)
.++ .++.++++++++++++|+||+|||++.+++++++ +.+++++. +++||+++||+
T Consensus 68 ~~~------------------~~~~~~~~~~~~~~~aDvVilav~~~~~~~v~~~~~~gl~~~l~~~--~~ivv~~~~gi 127 (366)
T 1evy_A 68 QLA------------------SNITFTSDVEKAYNGAEIILFVIPTQFLRGFFEKSGGNLIAYAKEK--QVPVLVCTKGI 127 (366)
T ss_dssp BCC------------------TTEEEESCHHHHHTTCSSEEECCCHHHHHHHHHHHCHHHHHHHHHH--TCCEEECCCSC
T ss_pred ccc------------------cceeeeCCHHHHHcCCCEEEECCChHHHHHHHHHhHHHHHHhcCcc--CCEEEEECCcC
Confidence 111 1577888998888999999999999999999999 99888640 36889999999
Q ss_pred cccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhccCceeEEE-eCChhhHHHHHHHhCCC--CeEEEecCCh
Q 019978 201 EAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARI-CGAEKWRKPLAKFLRRP--HFTVWDNGDL 277 (333)
Q Consensus 201 ~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~~~~~~~~~-~~~~~~~~~l~~ll~~~--~~~v~~s~Di 277 (333)
.++ +.+.+++.+.+.+|. .+..++.||+++.++..+.++.+.. +.+++..+.++.+|+.. +++++.++|+
T Consensus 128 ~~~-----~~~~~~~~l~~~~~~--~~~~v~~gp~~~~~~~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~g~~~~~~~di 200 (366)
T 1evy_A 128 ERS-----TLKFPAEIIGEFLPS--PLLSVLAGPSFAIEVATGVFTCVSIASADINVARRLQRIMSTGDRSFVCWATTDT 200 (366)
T ss_dssp CTT-----TCCCHHHHHTTTSCG--GGEEEEESSCCHHHHHTTCCEEEEEECSSHHHHHHHHHHHSCTTSSEEEEEESCH
T ss_pred CCc-----cccCHHHHHHHHCCC--CcEEEEeCCChHHHHHhCCceEEEEecCCHHHHHHHHHHhcCCCCeEEEEEcCCc
Confidence 886 346777888776653 3567899999999988887765554 45667889999999999 9999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHH-HHCCCCCC
Q 019978 278 VTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVVM-HGMGRSWQ 330 (333)
Q Consensus 278 ~gve~~~alkNv~Ai~~Gi~~gl~~~~~n~~~~l~~~~~~E~~~l-~~~G~~~~ 330 (333)
.+++|++++||++++++|++.++++ ++|...+++..++.|+..+ +++|.+..
T Consensus 201 ~~~~~~k~~~n~~~~~~~~~~~~~~-~~n~~~~~~~~~~~E~~~la~a~Gi~~~ 253 (366)
T 1evy_A 201 VGCEVASAVKNVLAIGSGVANGLGM-GLNARAALIMRGLLEIRDLTAALGGDGS 253 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTC-CHHHHHHHHHHHHHHHHHHHHHTTCCCT
T ss_pred hHHHHHHHHHhHHHHHHHHHhhccC-CccHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 9999999999999999999999998 5888889999999999999 99999764
No 7
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=99.94 E-value=3.6e-27 Score=224.83 Aligned_cols=221 Identities=16% Similarity=0.149 Sum_probs=172.6
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
.+|||+|||+|+||+++|..|+++ | ++|++| ++++++++++.+++ +.. .++.
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~-G-----~~V~l~-~~~~~~~~i~~~g~----------------~~~-~~~~---- 69 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARA-G-----HEVILI-ARPQHVQAIEATGL----------------RLE-TQSF---- 69 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHT-T-----CEEEEE-CCHHHHHHHHHHCE----------------EEE-CSSC----
T ss_pred cCCcEEEECcCHHHHHHHHHHHHC-C-----CeEEEE-EcHhHHHHHHhCCe----------------EEE-cCCC----
Confidence 358999999999999999999999 8 999999 88777665443221 110 1110
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCc
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~ 201 (333)
.++ .++.+++++++ +.++|+||+|||+++++++++++++++++ +++||+++||++
T Consensus 70 ---~~~------------------~~~~~~~~~~~-~~~~D~vilavk~~~~~~~l~~l~~~l~~---~~~iv~~~nGi~ 124 (318)
T 3hwr_A 70 ---DEQ------------------VKVSASSDPSA-VQGADLVLFCVKSTDTQSAALAMKPALAK---SALVLSLQNGVE 124 (318)
T ss_dssp ---EEE------------------ECCEEESCGGG-GTTCSEEEECCCGGGHHHHHHHHTTTSCT---TCEEEEECSSSS
T ss_pred ---cEE------------------EeeeeeCCHHH-cCCCCEEEEEcccccHHHHHHHHHHhcCC---CCEEEEeCCCCC
Confidence 111 15667788765 68999999999999999999999999987 789999999999
Q ss_pred ccccCCccCCCHHHHHHhHhCCCC------CcEEEEcCCCchHHHhccCceeEEEeCChhhHHHHHHHhCCCCeEEEecC
Q 019978 202 AELEAVPRIITPTQMINRATGVPI------ENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNG 275 (333)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~------~~~~vl~GP~~a~ev~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~s~ 275 (333)
.. +.+.+.+| .. ...+++.||+++.++..+.++ ++. .+..+.++++|++.+|+++.++
T Consensus 125 ~~-----------~~l~~~~~-~~vl~g~~~~~a~~~gP~~~~~~~~g~~~---ig~-~~~~~~l~~~l~~~~~~~~~~~ 188 (318)
T 3hwr_A 125 NA-----------DTLRSLLE-QEVAAAVVYVATEMAGPGHVRHHGRGELV---IEP-TSHGANLAAIFAAAGVPVETSD 188 (318)
T ss_dssp HH-----------HHHHHHCC-SEEEEEEEEEEEEEEETTEEEEEEEEEEE---ECC-CTTTHHHHHHHHHTTCCEEECS
T ss_pred cH-----------HHHHHHcC-CcEEEEEEEEeEEEcCCeEEEEcCCceEE---EcC-CHHHHHHHHHHHhCCCCcEech
Confidence 75 34555554 11 123568899999988777443 333 4667899999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHhccCCCC---CccHHHHHHHHHHHHHHH-HHCCCCCCC
Q 019978 276 DLVTHEVMGGLKNVYAIGAGMVAALTNES---ATSKSVYFAHCTSEMVVM-HGMGRSWQK 331 (333)
Q Consensus 276 Di~gve~~~alkNv~Ai~~Gi~~gl~~~~---~n~~~~l~~~~~~E~~~l-~~~G~~~~~ 331 (333)
|+.+.+|+++++|+..+..+++.+.+++. +.....++.+++.|+..+ +++|.++..
T Consensus 189 Di~~~~w~Kl~~N~~~n~l~al~~~~~g~l~~~~~~~~l~~~~~~E~~~va~a~G~~l~~ 248 (318)
T 3hwr_A 189 NVRGALWAKLILNCAYNALSAITQLPYGRLVRGEGVEAVMRDVMEECFAVARAEGVKLPD 248 (318)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSTTHHHHHHHHHHHHHHHHHHTTCCCCT
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHCCCHHHHhcChhHHHHHHHHHHHHHHHHHHcCCCCCh
Confidence 99999999999999999999999887631 234569999999999999 999998764
No 8
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.93 E-value=1.5e-25 Score=212.65 Aligned_cols=226 Identities=21% Similarity=0.334 Sum_probs=176.8
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEec--CCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRR--PGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r--~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
|||+|||+|+||+++|..|+++ | ++|++|+| +++++++++.++ .+..+ +.
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~-g-----~~V~~~~r~~~~~~~~~~~~~~----------------~~~~~--g~---- 52 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDN-G-----NEVRIWGTEFDTEILKSISAGR----------------EHPRL--GV---- 52 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH-C-----CEEEEECCGGGHHHHHHHHTTC----------------CBTTT--TB----
T ss_pred CEEEEECcCHHHHHHHHHHHhC-C-----CeEEEEEccCCHHHHHHHHHhC----------------cCccc--Cc----
Confidence 6999999999999999999999 8 99999999 776654432111 00000 00
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEec--CHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeec
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVT--NLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~--d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kG 199 (333)
.+ .++.+++ +++++++++|+||++||++.++++++++.+ +++ +++||+++||
T Consensus 53 ---~~-------------------~~~~~~~~~~~~~~~~~~D~vi~~v~~~~~~~v~~~i~~-l~~---~~~vv~~~ng 106 (335)
T 1txg_A 53 ---KL-------------------NGVEIFWPEQLEKCLENAEVVLLGVSTDGVLPVMSRILP-YLK---DQYIVLISKG 106 (335)
T ss_dssp ---CC-------------------CSEEEECGGGHHHHHTTCSEEEECSCGGGHHHHHHHHTT-TCC---SCEEEECCCS
T ss_pred ---cc-------------------cceEEecHHhHHHHHhcCCEEEEcCChHHHHHHHHHHhc-CCC---CCEEEEEcCc
Confidence 00 1356666 787888999999999999999999999999 876 7889999999
Q ss_pred C---cccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhccCceeEEE-eCChhhHHHHHHHhCCCCeEEEecC
Q 019978 200 V---EAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARI-CGAEKWRKPLAKFLRRPHFTVWDNG 275 (333)
Q Consensus 200 i---~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~~~~~~~~~-~~~~~~~~~l~~ll~~~~~~v~~s~ 275 (333)
+ .++ +.+.+++.+.+.+|.. .+..++.||+++.++..+.++.+++ +.+++..+.++++|+..+++++..+
T Consensus 107 ~~~~~~~-----~~~~l~~~~~~~~g~~-~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ll~~~g~~~~~~~ 180 (335)
T 1txg_A 107 LIDFDNS-----VLTVPEAVWRLKHDLR-ERTVAITGPAIAREVAKRMPTTVVFSSPSESSANKMKEIFETEYFGVEVTT 180 (335)
T ss_dssp EEEETTE-----EEEHHHHHHTTSTTCG-GGEEEEESSCCHHHHHTTCCEEEEEECSCHHHHHHHHHHHCBTTEEEEEES
T ss_pred CccCCCC-----cCccHHHHHHHhcCCC-CcEEEEECCCcHHHHHccCCcEEEEEeCCHHHHHHHHHHhCCCcEEEEecC
Confidence 9 543 2234445554433321 2467889999999888777655444 3456788999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHhccCCCC-----CccHHHHHHHHHHHHHHH-HHCCCCCC
Q 019978 276 DLVTHEVMGGLKNVYAIGAGMVAALTNES-----ATSKSVYFAHCTSEMVVM-HGMGRSWQ 330 (333)
Q Consensus 276 Di~gve~~~alkNv~Ai~~Gi~~gl~~~~-----~n~~~~l~~~~~~E~~~l-~~~G~~~~ 330 (333)
|+.+.+|+++++|++++++|++.++++ + +|...+++..+++|+..+ +++|.+..
T Consensus 181 di~~~~~~k~~~N~~~~~~~~~~~~~~-~~l~~~~n~~~~~~~~~~~E~~~la~~~G~~~~ 240 (335)
T 1txg_A 181 DIIGTEITSALKNVYSIAIAWIRGYES-RKNVEMSNAKGVIATRAINEMAELIEILGGDRE 240 (335)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTCCCHHHHHHHHHHHHHHHHHHHHHHTSCGG
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhcC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 999999999999999999999998877 4 566779999999999999 99998764
No 9
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=99.93 E-value=3.8e-26 Score=216.91 Aligned_cols=224 Identities=20% Similarity=0.152 Sum_probs=167.4
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
|||+|||+|+||+++|..|+++ | ++|++|+|++ .++++.++ ..+.+.. ++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-g-----~~V~~~~r~~--~~~i~~~g-------------------~~~~~~~---g~ 52 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS-G-----EDVHFLLRRD--YEAIAGNG-------------------LKVFSIN---GD 52 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT-S-----CCEEEECSTT--HHHHHHTC-------------------EEEEETT---CC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-C-----CeEEEEEcCc--HHHHHhCC-------------------CEEEcCC---Ce
Confidence 7999999999999999999999 8 9999999986 34433211 1111100 00
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCccc
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEAE 203 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~~~ 203 (333)
..+ .++.+++++++ +.++|+||+|||+++++++++++++++++ +++||+++||++..
T Consensus 53 ~~~-------------------~~~~~~~~~~~-~~~~D~vilavk~~~~~~~l~~l~~~l~~---~~~iv~l~nGi~~~ 109 (312)
T 3hn2_A 53 FTL-------------------PHVKGYRAPEE-IGPMDLVLVGLKTFANSRYEELIRPLVEE---GTQILTLQNGLGNE 109 (312)
T ss_dssp EEE-------------------SCCCEESCHHH-HCCCSEEEECCCGGGGGGHHHHHGGGCCT---TCEEEECCSSSSHH
T ss_pred EEE-------------------eeceeecCHHH-cCCCCEEEEecCCCCcHHHHHHHHhhcCC---CCEEEEecCCCCcH
Confidence 011 13556777765 68999999999999999999999999987 78999999999864
Q ss_pred ccCCccCCCHHHHHHhHhCCCCC------cEEEEcCCCchHHHhccCceeEEE-eCChhhHHHHHHHhCCCCeEEEecCC
Q 019978 204 LEAVPRIITPTQMINRATGVPIE------NILYLGGPNIASEIYNKEYANARI-CGAEKWRKPLAKFLRRPHFTVWDNGD 276 (333)
Q Consensus 204 ~~~~~~~~~~se~i~~~lg~~~~------~~~vl~GP~~a~ev~~~~~~~~~~-~~~~~~~~~l~~ll~~~~~~v~~s~D 276 (333)
+.+.+.+|.... ..+.+.||+++.+...+....... ..+.+..+.++++|++.+|+++.++|
T Consensus 110 -----------~~l~~~~~~~~v~~~~~~~~a~~~~p~~v~~~~~g~~~ig~~~~~~~~~~~~l~~~l~~~g~~~~~~~d 178 (312)
T 3hn2_A 110 -----------EALATLFGAERIIGGVAFLCSNRGEPGEVHHLGAGRIILGEFLPRDTGRIEELAAMFRQAGVDCRTTDD 178 (312)
T ss_dssp -----------HHHHHHTCGGGEEEEEEEEECCBCSSSEEEECEEEEEEEEESSCCCSHHHHHHHHHHHHTTCCEEECSC
T ss_pred -----------HHHHHHCCCCcEEEEEEEeeeEEcCCcEEEECCCCeEEEecCCCCccHHHHHHHHHHHhCCCCcEEChH
Confidence 456676753210 113456899987665432211111 12346789999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccCCCC---CccHHHHHHHHHHHHHHH-HHCC--CCCCC
Q 019978 277 LVTHEVMGGLKNVYAIGAGMVAALTNES---ATSKSVYFAHCTSEMVVM-HGMG--RSWQK 331 (333)
Q Consensus 277 i~gve~~~alkNv~Ai~~Gi~~gl~~~~---~n~~~~l~~~~~~E~~~l-~~~G--~~~~~ 331 (333)
+.+.+|.|+++|+..+..+++.+.+++. ++...+++++++.|+..+ +++| .++..
T Consensus 179 i~~~~w~Kl~~N~~~n~l~al~~~~~G~l~~~~~~~~l~~~~~~E~~~va~a~G~~~~~~~ 239 (312)
T 3hn2_A 179 LKRARWEKLVWNIPFNGLCALLQQPVNLILARDVSRKLVRGIMLEVIAGANAQGLATFIAD 239 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSHHHHHHHHHHHHHHHHHHHTSCCSSCCCT
T ss_pred HHHHHHHHHHHHHhHHHHHHHHCCCHHHHHhChhHHHHHHHHHHHHHHHHHHcCCccCCCH
Confidence 9999999999999888888888877632 456789999999999999 9999 77653
No 10
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=99.92 E-value=1.2e-25 Score=214.07 Aligned_cols=221 Identities=18% Similarity=0.208 Sum_probs=162.1
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
|||+|||+|+||+++|..|+++ | ++|++|+|++ .++++.+++ ..+..+.. +
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-g-----~~V~~~~r~~--~~~i~~~Gl--------------~~~~~~~g-------~ 53 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-G-----HCVSVVSRSD--YETVKAKGI--------------RIRSATLG-------D 53 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-T-----CEEEEECSTT--HHHHHHHCE--------------EEEETTTC-------C
T ss_pred CEEEEECcCHHHHHHHHHHHhC-C-----CeEEEEeCCh--HHHHHhCCc--------------EEeecCCC-------c
Confidence 7999999999999999999999 8 9999999986 244332221 00100111 1
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCccc
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEAE 203 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~~~ 203 (333)
..+ .++.++++++++.+++|+||+|||+++++++++++++++++ +++||+++||+...
T Consensus 54 ~~~-------------------~~~~~~~~~~~~~~~~DlVilavK~~~~~~~l~~l~~~l~~---~t~Iv~~~nGi~~~ 111 (320)
T 3i83_A 54 YTF-------------------RPAAVVRSAAELETKPDCTLLCIKVVEGADRVGLLRDAVAP---DTGIVLISNGIDIE 111 (320)
T ss_dssp EEE-------------------CCSCEESCGGGCSSCCSEEEECCCCCTTCCHHHHHTTSCCT---TCEEEEECSSSSCS
T ss_pred EEE-------------------eeeeeECCHHHcCCCCCEEEEecCCCChHHHHHHHHhhcCC---CCEEEEeCCCCChH
Confidence 011 13556778877656899999999999999999999999987 78999999999875
Q ss_pred ccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCch-------HHHhccCceeEEEe----CChhhHHHHHHHhCCCCeEEE
Q 019978 204 LEAVPRIITPTQMINRATGVPIENILYLGGPNIA-------SEIYNKEYANARIC----GAEKWRKPLAKFLRRPHFTVW 272 (333)
Q Consensus 204 ~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a-------~ev~~~~~~~~~~~----~~~~~~~~l~~ll~~~~~~v~ 272 (333)
+.+++.++.. .+++||++. .++....+..+.++ .+.+..+.++++|++.+|+++
T Consensus 112 -----------~~l~~~~~~~----~vl~g~~~~~a~~~~pg~v~~~~~~~~~ig~~~~~~~~~~~~l~~~l~~~~~~~~ 176 (320)
T 3i83_A 112 -----------PEVAAAFPDN----EVISGLAFIGVTRTAPGEIWHQAYGRLMLGNYPGGVSERVKTLAAAFEEAGIDGI 176 (320)
T ss_dssp -----------HHHHHHSTTS----CEEEEEEEEEEEEEETTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHHHTTSCEE
T ss_pred -----------HHHHHHCCCC----cEEEEEEEeceEEcCCCEEEECCCCEEEEecCCCCccHHHHHHHHHHHhCCCCce
Confidence 5677878642 255666664 23332223333332 234678999999999999999
Q ss_pred ecCChhHHHHHHHHHHHHHHHHHHHhccCCC---CCccHHHHHHHHHHHHHHH-HHCCCCCCC
Q 019978 273 DNGDLVTHEVMGGLKNVYAIGAGMVAALTNE---SATSKSVYFAHCTSEMVVM-HGMGRSWQK 331 (333)
Q Consensus 273 ~s~Di~gve~~~alkNv~Ai~~Gi~~gl~~~---~~n~~~~l~~~~~~E~~~l-~~~G~~~~~ 331 (333)
.++|+.+.+|+|+++|+.-....++.+..++ .++. .+++++++.|+..+ +++|.++..
T Consensus 177 ~~~di~~~~w~Kl~~N~~~N~ltal~~~~~g~~~~~~~-~~l~~~~~~E~~~va~a~G~~l~~ 238 (320)
T 3i83_A 177 ATENITTARWQKCVWNAAFNPLSVLSGGLDTLDILSTQ-EGFVRAIMQEIRAVAAANGHPLPE 238 (320)
T ss_dssp ECSCHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHC-HHHHHHHHHHHHHHHHHTTCCCCT
T ss_pred ECHHHHHHHHHHHHHHHhhhHHHHHHCCCHHHHHhCcH-HHHHHHHHHHHHHHHHHcCCCCCh
Confidence 9999999999999999744444444444432 2334 89999999999999 999998764
No 11
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=99.91 E-value=9.2e-25 Score=209.29 Aligned_cols=234 Identities=15% Similarity=0.116 Sum_probs=170.0
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
+|||+|||+|+||+++|..|+++ | ++|++|+|+ +.+++++.++ ..... .
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~-g-----~~V~~~~r~-~~~~~~~~~g-------------------~~~~~-~---- 51 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALA-G-----EAINVLARG-ATLQALQTAG-------------------LRLTE-D---- 51 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHT-T-----CCEEEECCH-HHHHHHHHTC-------------------EEEEE-T----
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-C-----CEEEEEECh-HHHHHHHHCC-------------------CEEec-C----
Confidence 48999999999999999999999 8 999999996 4454432211 11110 0
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCcc
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~~ 202 (333)
+..++ .++.+++++++ +.++|+||+|||+++++++++++++++++ +++||+++||++.
T Consensus 52 ~~~~~------------------~~~~~~~~~~~-~~~~D~Vilavk~~~~~~~~~~l~~~l~~---~~~iv~~~nGi~~ 109 (335)
T 3ghy_A 52 GATHT------------------LPVRATHDAAA-LGEQDVVIVAVKAPALESVAAGIAPLIGP---GTCVVVAMNGVPW 109 (335)
T ss_dssp TEEEE------------------ECCEEESCHHH-HCCCSEEEECCCHHHHHHHHGGGSSSCCT---TCEEEECCSSSCT
T ss_pred CCeEE------------------EeeeEECCHHH-cCCCCEEEEeCCchhHHHHHHHHHhhCCC---CCEEEEECCCCcc
Confidence 00010 14667788876 68999999999999999999999999887 7899999999851
Q ss_pred cc-cC--CccCCC-----HHHHHHhHhCCCCCcE-------EEEcCCCchHHHhccCceeEEE-eCChhhHHHHHHHhCC
Q 019978 203 EL-EA--VPRIIT-----PTQMINRATGVPIENI-------LYLGGPNIASEIYNKEYANARI-CGAEKWRKPLAKFLRR 266 (333)
Q Consensus 203 ~~-~~--~~~~~~-----~se~i~~~lg~~~~~~-------~vl~GP~~a~ev~~~~~~~~~~-~~~~~~~~~l~~ll~~ 266 (333)
.. .+ ..+..+ ..+.+.+.+|.. .-+ +.+.+|+++.+...+....... ..+.+..+.++++|++
T Consensus 110 ~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~-~v~~gv~~~~a~~~~pg~v~~~~~g~~~iG~~~~~~~~~~~~l~~~l~~ 188 (335)
T 3ghy_A 110 WFFDRPGPLQGQRLQAVDPHGRIAQAIPTR-HVLGCVVHLTCATVSPGHIRHGNGRRLILGEPAGGASPRLASIAALFGR 188 (335)
T ss_dssp TTTCSSSTTTTCCCTTTCTTSHHHHHSCGG-GEEEEEECCCEEESSTTEEEECSCCEEEEECTTCSCCHHHHHHHHHHHH
T ss_pred ccccccccccccccccCCcHHHHHHhcCcc-cEEEEEEEEEEEEcCCcEEEECCCCeEEEecCCCCcCHHHHHHHHHHHh
Confidence 10 00 001111 224677777632 111 5678999987665442221111 2234678999999999
Q ss_pred CCeEEEecCChhHHHHHHH----HHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHH-HHCCCCCCC
Q 019978 267 PHFTVWDNGDLVTHEVMGG----LKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVVM-HGMGRSWQK 331 (333)
Q Consensus 267 ~~~~v~~s~Di~gve~~~a----lkNv~Ai~~Gi~~gl~~~~~n~~~~l~~~~~~E~~~l-~~~G~~~~~ 331 (333)
.+|+++.++|+.+..|.+. .+|++++.+|+..|..+ +++...++++++++|+..+ +++|.++..
T Consensus 189 ~g~~~~~~~di~~~~w~Kl~~na~~N~l~al~~~~~g~~~-~~~~~~~l~~~~~~E~~~va~a~G~~~~~ 257 (335)
T 3ghy_A 189 AGLQAECSEAIQRDIWFKLWGNMTMNPVSVLTGATCDRIL-DDPLVSAFCLAVMAEAKAIGARIGCPIEQ 257 (335)
T ss_dssp TTCEEEECSCHHHHHHHHHHTTTTHHHHHHHHCCCHHHHH-HSHHHHHHHHHHHHHHHHHHHTTTCCCCS
T ss_pred CCCCcEeCchHHHHHHHHHHHHhhhhHHHHHhCCChHHHh-cChHHHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 9999999999999987774 58888888888888776 5677889999999999999 999998753
No 12
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=99.90 E-value=4.6e-23 Score=194.09 Aligned_cols=210 Identities=13% Similarity=0.104 Sum_probs=153.9
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
|||+|||+|+||+++|..|+++ | ++|++|+|+++.++... . + +
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~-g-----~~V~~~~r~~~~~~~~~---------~----------~-----g------- 45 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQS-L-----PHTTLIGRHAKTITYYT---------V----------P-----H------- 45 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-C-----TTCEEEESSCEEEEEES---------S----------T-----T-------
T ss_pred cEEEEECCCHHHHHHHHHHHHC-C-----CeEEEEEeccCcEEEEe---------c----------C-----C-------
Confidence 7999999999999999999999 8 89999999976543100 0 0 0
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHh-cCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCcc
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAV-WDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~-~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~~ 202 (333)
.. +..++.+..+++ +++|+||+|||+++++++++++++++++ +++||+++||++.
T Consensus 46 -~~--------------------~~~~~~~~~~~~~~~~D~vilavk~~~~~~~l~~l~~~l~~---~~~iv~~~nGi~~ 101 (294)
T 3g17_A 46 -AP--------------------AQDIVVKGYEDVTNTFDVIIIAVKTHQLDAVIPHLTYLAHE---DTLIILAQNGYGQ 101 (294)
T ss_dssp -SC--------------------CEEEEEEEGGGCCSCEEEEEECSCGGGHHHHGGGHHHHEEE---EEEEEECCSSCCC
T ss_pred -ee--------------------ccceecCchHhcCCCCCEEEEeCCccCHHHHHHHHHHhhCC---CCEEEEeccCccc
Confidence 00 122223334444 7899999999999999999999999987 7899999999998
Q ss_pred cccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhccCceeEEEeCChhhHHHHHHHhCCCCeEEEecCChhHHHH
Q 019978 203 ELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVTHEV 282 (333)
Q Consensus 203 ~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~s~Di~gve~ 282 (333)
.+. .+. .+.++......+.+.||+++. . + +..... ++.+..+.++++|++.+|+++.++|+.+.+|
T Consensus 102 ~~~------~~~---~~v~~g~~~~~a~~~~pg~v~-~--~-~~~~~~-~~~~~~~~l~~~l~~~~~~~~~~~di~~~~w 167 (294)
T 3g17_A 102 LEH------IPF---KNVCQAVVYISGQKKGDVVTH-F--R-DYQLRI-QDNALTRQFRDLVQDSQIDIVLEANIQQAIW 167 (294)
T ss_dssp GGG------CCC---SCEEECEEEEEEEEETTEEEE-E--E-EEEEEE-ECSHHHHHHHHHTTTSSCEEEEESSHHHHHH
T ss_pred Hhh------CCC---CcEEEEEEEEEEEEcCCCEEE-E--C-CCEEec-CccHHHHHHHHHHHhCCCceEEChHHHHHHH
Confidence 630 010 011110001235678999872 2 2 222222 3456789999999999999999999999999
Q ss_pred HHHHHHH-HHHHHHHHhccCCC---CCccHHHHHHHHHHHHHHH-HHCCCCCC
Q 019978 283 MGGLKNV-YAIGAGMVAALTNE---SATSKSVYFAHCTSEMVVM-HGMGRSWQ 330 (333)
Q Consensus 283 ~~alkNv-~Ai~~Gi~~gl~~~---~~n~~~~l~~~~~~E~~~l-~~~G~~~~ 330 (333)
.|+++|+ ++ .+++ .+..++ .++....++++++.|+..+ +++|.++.
T Consensus 168 ~Kl~~N~~in-l~al-~~~~~g~~l~~~~~~~l~~~~~~E~~~va~a~G~~l~ 218 (294)
T 3g17_A 168 YKLLVNLGIN-SITA-LGRQTVAIMHNPEIRILCRQLLLDGCRVAQAEGLNFS 218 (294)
T ss_dssp HHHHHHHHHH-HHHH-HHTSCGGGGGSHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHH-HHHH-HCCChHHHHcCHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 9999999 45 4444 455542 2566789999999999999 99999865
No 13
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.88 E-value=4.1e-22 Score=186.58 Aligned_cols=225 Identities=14% Similarity=0.139 Sum_probs=161.6
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
+|||+|||+|+||+++|..|+++ | ++|++|+|+++++++++.+++ ...+..
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~-g-----~~V~~~~r~~~~~~~~~~~g~-------------------~~~~~~---- 53 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQG-G-----NDVTLIDQWPAHIEAIRKNGL-------------------IADFNG---- 53 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHHHCE-------------------EEEETT----
T ss_pred CCeEEEECcCHHHHHHHHHHHhC-C-----CcEEEEECCHHHHHHHHhCCE-------------------EEEeCC----
Confidence 58999999999999999999999 8 999999999877654432110 011000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecC--HHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecC
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTN--LQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d--~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi 200 (333)
+ .++ .++.++++ ..++++++|+||+|||++.++++++++.+++++ +++|+++++|+
T Consensus 54 ~-~~~------------------~~~~~~~~~~~~~~~~~~d~vi~~v~~~~~~~v~~~l~~~l~~---~~~iv~~~~g~ 111 (316)
T 2ew2_A 54 E-EVV------------------ANLPIFSPEEIDHQNEQVDLIIALTKAQQLDAMFKAIQPMITE---KTYVLCLLNGL 111 (316)
T ss_dssp E-EEE------------------ECCCEECGGGCCTTSCCCSEEEECSCHHHHHHHHHHHGGGCCT---TCEEEECCSSS
T ss_pred C-eeE------------------ecceeecchhhcccCCCCCEEEEEeccccHHHHHHHHHHhcCC---CCEEEEecCCC
Confidence 0 000 02333332 112234899999999999999999999998876 78999999998
Q ss_pred cccccCCccCCCHHHHHHhHhCCCC------CcEEEEcCCCchHHHhccCceeEEE-eCChhhHHHHHHHhCCCCeEEEe
Q 019978 201 EAELEAVPRIITPTQMINRATGVPI------ENILYLGGPNIASEIYNKEYANARI-CGAEKWRKPLAKFLRRPHFTVWD 273 (333)
Q Consensus 201 ~~~~~~~~~~~~~se~i~~~lg~~~------~~~~vl~GP~~a~ev~~~~~~~~~~-~~~~~~~~~l~~ll~~~~~~v~~ 273 (333)
... +.+.+.++... ...+.+.||+++.+...+.+..... +.+++..+.++++|+..+++++.
T Consensus 112 ~~~-----------~~l~~~~~~~~vi~g~~~~~~~~~~p~~~~~~~~g~~~i~~~~~~~~~~~~~~~~ll~~~g~~~~~ 180 (316)
T 2ew2_A 112 GHE-----------DVLEKYVPKENILVGITMWTAGLEGPGRVKLLGDGEIELENIDPSGKKFALEVVDVFQKAGLNPSY 180 (316)
T ss_dssp CTH-----------HHHTTTSCGGGEEEEEECCCCEEEETTEEEECSCCCEEEEESSGGGHHHHHHHHHHHHHTTCCEEE
T ss_pred CcH-----------HHHHHHcCCccEEEEEeeeeeEEcCCCEEEEecCCcEEEeecCCCccHHHHHHHHHHHhCCCCcEE
Confidence 753 33555554210 0012367899887666665543322 34557789999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHhccCCC--CCccHH-HHHHHHHHHHHHH-HHCCCCC
Q 019978 274 NGDLVTHEVMGGLKNVYAIGAGMVAALTNE--SATSKS-VYFAHCTSEMVVM-HGMGRSW 329 (333)
Q Consensus 274 s~Di~gve~~~alkNv~Ai~~Gi~~gl~~~--~~n~~~-~l~~~~~~E~~~l-~~~G~~~ 329 (333)
.+|+.+.+|+++++|++..+.+.+.+.+.+ ..|... .++..++.|+..+ +++|.+.
T Consensus 181 ~~d~~~~~~~Kl~~N~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~E~~~la~~~G~~~ 240 (316)
T 2ew2_A 181 SSNVRYSIWRKACVNGTLNGLCTILDCNIAEFGALPVSESLVKTLISEFAAVAEKEAIYL 240 (316)
T ss_dssp CTTHHHHHHHHHHHHTTHHHHHHHHTCCHHHHHTSTTHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred chhHHHHHHHHHHHhhhHHHHHHHhCCcHHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999988887777766421 133344 8999999999999 9999876
No 14
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=99.84 E-value=4e-20 Score=184.40 Aligned_cols=218 Identities=17% Similarity=0.113 Sum_probs=162.0
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
...+|+|||+|+||+++|..|+++ | |+|++|+|++++++.++. + +++.|.+++.
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~-G-----~~V~~~D~~~~kv~~l~~---------g--------~~~~~epgl~--- 60 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDF-G-----HEVVCVDKDARKIELLHQ---------N--------VMPIYEPGLD--- 60 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCSTTHHHHTT---------T--------CCSSCCTTHH---
T ss_pred CceEEEEEcCCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHhc---------C--------CCCccCCCHH---
Confidence 457999999999999999999999 8 999999999998876442 2 3566777643
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-----------hHHHHHHHHHhhhhccCCC
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-----------ETKEVFEEISRYWKERITV 190 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-----------~~~~vl~~i~~~l~~~~~~ 190 (333)
|++.+... ..++++++|+++++++||+||+|||+. +++++++.+.+++++ +
T Consensus 61 --------~~~~~~~~-------~g~l~~ttd~~ea~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~---g 122 (446)
T 4a7p_A 61 --------ALVASNVK-------AGRLSFTTDLAEGVKDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTK---P 122 (446)
T ss_dssp --------HHHHHHHH-------TTCEEEESCHHHHHTTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCS---C
T ss_pred --------HHHHhhcc-------cCCEEEECCHHHHHhcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCC---C
Confidence 12211100 026889999999999999999997654 599999999999887 6
Q ss_pred CEEEEeeecCcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhc----cCceeEEEeC-ChhhHHHHHHHhC
Q 019978 191 PVIISLAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYN----KEYANARICG-AEKWRKPLAKFLR 265 (333)
Q Consensus 191 ~~Ivs~~kGi~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~----~~~~~~~~~~-~~~~~~~l~~ll~ 265 (333)
++||..+ +++++ +.+.+++.+.+..+. ..+.++++|.++.++.. ..++.+++++ +++..+.++.+|+
T Consensus 123 ~iVV~~S-Tv~pg-----tt~~l~~~l~e~~~~--~d~~v~~~Pe~a~eG~a~~d~~~p~~ivvG~~~~~~~~~~~~ly~ 194 (446)
T 4a7p_A 123 SVIVTKS-TVPVG-----TGDEVERIIAEVAPN--SGAKVVSNPEFLREGAAIEDFKRPDRVVVGTEDEFARQVMREIYR 194 (446)
T ss_dssp CEEEECS-CCCTT-----HHHHHHHHHHHHSTT--SCCEEEECCCCCCTTSHHHHHHSCSCEEEECSCHHHHHHHHHHHC
T ss_pred CEEEEeC-CCCch-----HHHHHHHHHHHhCCC--CCceEEeCcccccccchhhhccCCCEEEEeCCcHHHHHHHHHHHH
Confidence 7777655 78776 345667777665432 45779999999988764 4565556655 4678899999998
Q ss_pred CCCeE---EEecCChhHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHH-HHCCCCC
Q 019978 266 RPHFT---VWDNGDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVVM-HGMGRSW 329 (333)
Q Consensus 266 ~~~~~---v~~s~Di~gve~~~alkNv~Ai~~Gi~~gl~~~~~n~~~~l~~~~~~E~~~l-~~~G~~~ 329 (333)
...-. ++...|+.++|.+|...|. ..++....++|+..+ +++|.+.
T Consensus 195 ~~~~~~~~~~~~~d~~~aE~~Kl~~N~------------------~~a~~ia~~nE~~~l~~~~GiD~ 244 (446)
T 4a7p_A 195 PLSLNQSAPVLFTGRRTSELIKYAANA------------------FLAVKITFINEIADLCEQVGADV 244 (446)
T ss_dssp SCC-----CEEEECHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHTTCCH
T ss_pred HHhcCCCeEEEeCCHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHcCCCH
Confidence 64332 4678899999999776664 455666677888888 7887764
No 15
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.83 E-value=1.2e-20 Score=177.43 Aligned_cols=226 Identities=14% Similarity=0.080 Sum_probs=159.5
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCC-eeEEEEecCCcchhhhhh-hhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDK-VLIRIWRRPGRSVDRATA-EHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~-~~V~l~~r~~~~~~~~~~-~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
+|||+|||+|+||+++|..|+++ +....+ ++|++|+| ++++++++. .+ ....+..+
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~-~~~~~g~~~V~~~~r-~~~~~~l~~~~g-------------------~~~~~~~~- 65 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALR-AAATDGLLEVSWIAR-GAHLEAIRAAGG-------------------LRVVTPSR- 65 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-HHHTTSSEEEEEECC-HHHHHHHHHHTS-------------------EEEECSSC-
T ss_pred CCEEEEECcCHHHHHHHHHHHhC-ccccCCCCCEEEEEc-HHHHHHHHhcCC-------------------eEEEeCCC-
Confidence 47999999999999999999876 111112 78999999 655554332 11 01110000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecC
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi 200 (333)
+ .. . .++.++++.+ +++++|+||+|||++.++++++++++++++ +++||++++|+
T Consensus 66 --~-~~------------~------~~~~~~~~~~-~~~~~D~vil~vk~~~~~~v~~~i~~~l~~---~~~iv~~~nG~ 120 (317)
T 2qyt_A 66 --D-FL------------A------RPTCVTDNPA-EVGTVDYILFCTKDYDMERGVAEIRPMIGQ---NTKILPLLNGA 120 (317)
T ss_dssp --E-EE------------E------CCSEEESCHH-HHCCEEEEEECCSSSCHHHHHHHHGGGEEE---EEEEEECSCSS
T ss_pred --C-eE------------E------ecceEecCcc-ccCCCCEEEEecCcccHHHHHHHHHhhcCC---CCEEEEccCCC
Confidence 0 00 0 1355666664 468999999999999999999999998876 67899999998
Q ss_pred cccccCCccCCCHHHHHHhHhCCCC------CcEEEEcCCCchHHHhccCceeEEEeC-----ChhhHHHHHHHhCCCCe
Q 019978 201 EAELEAVPRIITPTQMINRATGVPI------ENILYLGGPNIASEIYNKEYANARICG-----AEKWRKPLAKFLRRPHF 269 (333)
Q Consensus 201 ~~~~~~~~~~~~~se~i~~~lg~~~------~~~~vl~GP~~a~ev~~~~~~~~~~~~-----~~~~~~~l~~ll~~~~~ 269 (333)
... +.+++.++... ...+.+.||+++.....+. ..+++. +.+.. .++++|+..++
T Consensus 121 ~~~-----------~~l~~~l~~~~v~~g~~~~~a~~~~pg~~~~~~~g~--~~~ig~~~~~~~~~~~-~~~~ll~~~g~ 186 (317)
T 2qyt_A 121 DIA-----------ERMRTYLPDTVVWKGCVYISARKSAPGLITLEADRE--LFYFGSGLPEQTDDEV-RLAELLTAAGI 186 (317)
T ss_dssp SHH-----------HHHTTTSCTTTBCEEEEEEEEEEEETTEEEEEEEEE--EEEEECCSSSCCHHHH-HHHHHHHHTTC
T ss_pred CcH-----------HHHHHHCCCCcEEEEEEEEEEEEcCCCEEEEcCCCc--eEEEcCCCCCCcCHHH-HHHHHHHHCCC
Confidence 753 44666665321 1124556777765443332 121321 24456 89999999999
Q ss_pred EEEecCChhHHHHHHHHHHHHHHHHHHHhccCCCCCcc--HHHHHHHHHHHHHHH-HHCCCCCC
Q 019978 270 TVWDNGDLVTHEVMGGLKNVYAIGAGMVAALTNESATS--KSVYFAHCTSEMVVM-HGMGRSWQ 330 (333)
Q Consensus 270 ~v~~s~Di~gve~~~alkNv~Ai~~Gi~~gl~~~~~n~--~~~l~~~~~~E~~~l-~~~G~~~~ 330 (333)
+++..+|+.+.+|.++++|+...+.+++.+.++ +... ...++.+++.|+..+ +++|.+..
T Consensus 187 ~~~~~~di~~~~~~Kl~~N~~~~~~~al~g~~~-g~~~~~~~~~~~~~~~E~~~v~~a~G~~~~ 249 (317)
T 2qyt_A 187 RAYNPTDIDWYIMKKFMMISVTATATAYFDKPI-GSILTEHEPELLSLLEEVAELFRAKYGQVP 249 (317)
T ss_dssp CEECCSCHHHHHHHHHHHHHHHHHHHHHHTSCH-HHHHHHCHHHHHHHHHHHHHHHHHHTSCCC
T ss_pred CCEEchHHHHHHHHHHHHHHhhHHHHHHHCCCH-HHHHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999998888888888876 3332 347899999999999 99999864
No 16
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.83 E-value=3.2e-20 Score=172.01 Aligned_cols=217 Identities=11% Similarity=0.061 Sum_probs=153.2
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
|||+|||+|+||+++|..|+++ | ++|++|+|+++++++++..+ ..+ .
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~-g-----~~V~~~~r~~~~~~~l~~~~---------------------~~~------~ 47 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQ-G-----HEVQGWLRVPQPYCSVNLVE---------------------TDG------S 47 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCSEEEEEEEC---------------------TTS------C
T ss_pred CeEEEECcCHHHHHHHHHHHhC-C-----CCEEEEEcCccceeeEEEEc---------------------CCC------c
Confidence 6999999999999999999999 8 99999999987654321100 000 0
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCccc
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEAE 203 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~~~ 203 (333)
.++ ..+.. ++. ++++++|+||++||++.++++++++.+++++ +++|+++++|+...
T Consensus 48 -~~~------------------~~~~~-~~~-~~~~~~d~vi~~v~~~~~~~v~~~l~~~l~~---~~~vv~~~~g~~~~ 103 (291)
T 1ks9_A 48 -IFN------------------ESLTA-NDP-DFLATSDLLLVTLKAWQVSDAVKSLASTLPV---TTPILLIHNGMGTI 103 (291)
T ss_dssp -EEE------------------EEEEE-SCH-HHHHTCSEEEECSCGGGHHHHHHHHHTTSCT---TSCEEEECSSSCTT
T ss_pred -eee------------------eeeee-cCc-cccCCCCEEEEEecHHhHHHHHHHHHhhCCC---CCEEEEecCCCCcH
Confidence 000 01222 343 5678999999999999999999999998876 78899999998653
Q ss_pred ccCCccCCCHHHHHHhHhCC--C--CCcEEEEcCCCchHHHhccCceeEEEeCChhhHHHHHHHhCCCCeEEEecCChhH
Q 019978 204 LEAVPRIITPTQMINRATGV--P--IENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVT 279 (333)
Q Consensus 204 ~~~~~~~~~~se~i~~~lg~--~--~~~~~vl~GP~~a~ev~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~s~Di~g 279 (333)
. .+.+.++. . ....+.+.|| .+.+...+.........+++..+.++++|+..++++++.+|+.+
T Consensus 104 ~-----------~l~~~~~~~~~g~~~~~~~~~~p-~~~~~~~g~~~i~~~~~~~~~~~~~~~ll~~~g~~~~~~~~~~~ 171 (291)
T 1ks9_A 104 E-----------ELQNIQQPLLMGTTTHAARRDGN-VIIHVANGITHIGPARQQDGDYSYLADILQTVLPDVAWHNNIRA 171 (291)
T ss_dssp G-----------GGTTCCSCEEEEEECCEEEEETT-EEEEEECCCEEEEESSGGGTTCTHHHHHHHTTSSCEEECTTHHH
T ss_pred H-----------HHHHhcCCeEEEEEeEccEEcCC-EEEEecccceEEccCCCCcchHHHHHHHHHhcCCCCeecHHHHH
Confidence 1 13333331 0 0113467899 66655555422211133456778999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHH-HHCCCCC
Q 019978 280 HEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVVM-HGMGRSW 329 (333)
Q Consensus 280 ve~~~alkNv~Ai~~Gi~~gl~~~~~n~~~~l~~~~~~E~~~l-~~~G~~~ 329 (333)
..|.+.+.|..-.....+.+.+++.-.....++..++.|+..+ +++|.+.
T Consensus 172 ~~~~Kl~~n~~~n~~tal~~~~~g~~~~~~~~~~~~~~E~~~va~a~G~~~ 222 (291)
T 1ks9_A 172 ELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGHHT 222 (291)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGGGGCHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHeeeeeecHHHHHHCCCchHHHhHHHHHHHHHHHHHHHHHHcCCCC
Confidence 9999999887555555555554421111358899999999999 9999875
No 17
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=99.83 E-value=4.5e-20 Score=185.49 Aligned_cols=220 Identities=14% Similarity=0.077 Sum_probs=159.0
Q ss_pred CCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 41 ~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
+..|||+|||+|+||+.+|..|+++ | |+|++|++++++++.++.. +++.+.+++.
T Consensus 6 ~~~~~I~VIG~G~vG~~lA~~la~~-G-----~~V~~~d~~~~~v~~l~~~-----------------~~~i~e~gl~-- 60 (478)
T 2y0c_A 6 HGSMNLTIIGSGSVGLVTGACLADI-G-----HDVFCLDVDQAKIDILNNG-----------------GVPIHEPGLK-- 60 (478)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHTT-----------------CCSSCCTTHH--
T ss_pred CCCceEEEECcCHHHHHHHHHHHhC-C-----CEEEEEECCHHHHHHHHCC-----------------CCCcCCCCHH--
Confidence 4579999999999999999999999 8 9999999999887654421 1234444321
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc----------hhHHHHHHHHHhhhhccCCC
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS----------TETKEVFEEISRYWKERITV 190 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps----------~~~~~vl~~i~~~l~~~~~~ 190 (333)
|++.+... ..++.+++|+++++++||+||+|||+ ++++++++++.+++++ +
T Consensus 61 ---------~~l~~~~~-------~~~l~~ttd~~~a~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~---~ 121 (478)
T 2y0c_A 61 ---------EVIARNRS-------AGRLRFSTDIEAAVAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTG---F 121 (478)
T ss_dssp ---------HHHHHHHH-------TTCEEEECCHHHHHHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCS---C
T ss_pred ---------HHHHHhcc-------cCCEEEECCHHHHhhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCC---C
Confidence 11111000 02578999998889999999999998 8999999999999987 6
Q ss_pred CEEEEeeecCcccccCCccCCCHHHHHHhHhCCCC--CcEEEEcCCCchHHHhc----cCceeEEEeCC-h----hhHHH
Q 019978 191 PVIISLAKGVEAELEAVPRIITPTQMINRATGVPI--ENILYLGGPNIASEIYN----KEYANARICGA-E----KWRKP 259 (333)
Q Consensus 191 ~~Ivs~~kGi~~~~~~~~~~~~~se~i~~~lg~~~--~~~~vl~GP~~a~ev~~----~~~~~~~~~~~-~----~~~~~ 259 (333)
++||..+ ++++++ .+.+++.+.+.++.+. ..+.+.++|.++.+... ..+..++++.+ + +..+.
T Consensus 122 ~iVV~~S-Tv~~gt-----~~~l~~~l~~~~~~g~~~~~~~v~~~Pe~~~eG~~~~~~~~p~~iviG~~~~~~~~~~~~~ 195 (478)
T 2y0c_A 122 KVIVDKS-TVPVGT-----AERVRAAVAEELAKRGGDQMFSVVSNPEFLKEGAAVDDFTRPDRIVIGCDDDVPGERAREL 195 (478)
T ss_dssp EEEEECS-CCCTTH-----HHHHHHHHHHHHHHTTCCCCEEEEECCCCCCTTCHHHHHHSCSCEEEECCSSHHHHHHHHH
T ss_pred CEEEEeC-CcCCCc-----hHHHHHHHHHHhcCCCCCccEEEEEChhhhcccceeeccCCCCEEEEEECCCcccHHHHHH
Confidence 7776554 777652 3445666665432111 34678999999987654 34544555433 4 57888
Q ss_pred HHHHhCCCCe---EEEecCChhHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHH-HHCCCCC
Q 019978 260 LAKFLRRPHF---TVWDNGDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVVM-HGMGRSW 329 (333)
Q Consensus 260 l~~ll~~~~~---~v~~s~Di~gve~~~alkNv~Ai~~Gi~~gl~~~~~n~~~~l~~~~~~E~~~l-~~~G~~~ 329 (333)
++++|+. .+ .++...|+.++||+|.+-|. ..++....++|+..+ +++|.+.
T Consensus 196 ~~~l~~~-~~~~~~~~~~~di~~ae~~Kl~~N~------------------~~a~~ia~~nE~~~la~~~Gid~ 250 (478)
T 2y0c_A 196 MKKLYAP-FNRNHERTLYMDVRSAEFTKYAANA------------------MLATRISFMNELANLADRFGADI 250 (478)
T ss_dssp HHHHTGG-GGSSSCCEEEECHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHTTCCH
T ss_pred HHHHHHH-HhccCCeEEcCCHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHhCCCH
Confidence 9999985 55 37788999999999998886 345666778888888 7888764
No 18
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=99.83 E-value=2.2e-20 Score=177.08 Aligned_cols=211 Identities=13% Similarity=0.054 Sum_probs=150.5
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
|||+|||+|+||+++|..|+ + | ++|++|+|+++++++++.+++ .... . +
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~-g-----~~V~~~~r~~~~~~~l~~~G~-------------------~~~~-~----~ 51 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-L-Y-----HDVTVVTRRQEQAAAIQSEGI-------------------RLYK-G----G 51 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T-T-----SEEEEECSCHHHHHHHHHHCE-------------------EEEE-T----T
T ss_pred CEEEEECCCHHHHHHHHHHh-c-C-----CceEEEECCHHHHHHHHhCCc-------------------eEec-C----C
Confidence 89999999999999999999 8 8 999999999876655433221 1110 0 0
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCccc
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEAE 203 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~~~ 203 (333)
...+ ..+..+. ++...+|+||+|||++++++++++++++ .+ ++ ||+++||+...
T Consensus 52 ~~~~------------------~~~~~~~---~~~~~~D~vilavK~~~~~~~l~~l~~~-~~---~~-ivs~~nGi~~~ 105 (307)
T 3ego_A 52 EEFR------------------ADCSADT---SINSDFDLLVVTVKQHQLQSVFSSLERI-GK---TN-ILFLQNGMGHI 105 (307)
T ss_dssp EEEE------------------ECCEEES---SCCSCCSEEEECCCGGGHHHHHHHTTSS-CC---CE-EEECCSSSHHH
T ss_pred Ceec------------------ccccccc---cccCCCCEEEEEeCHHHHHHHHHHhhcC-CC---Ce-EEEecCCccHH
Confidence 0000 0222222 2457899999999999999999999875 44 56 99999999975
Q ss_pred ccCCccCCCHHHHHHhHhCCCC------CcEEEEcCCCchHHHhccCceeEEEeCChhhHHHHHHHhCCCCeEEEecCCh
Q 019978 204 LEAVPRIITPTQMINRATGVPI------ENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDL 277 (333)
Q Consensus 204 ~~~~~~~~~~se~i~~~lg~~~------~~~~vl~GP~~a~ev~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~s~Di 277 (333)
+.+++.+|... ...+.+.+|++......+...+....+..+..+.+.+.|+..++++.+++|+
T Consensus 106 -----------e~l~~~~~~~~vl~g~~~~~a~~~~pg~v~~~~~g~~~iG~~~~~~~~~~~l~~~l~~ag~~~~~~~di 174 (307)
T 3ego_A 106 -----------HDLKDWHVGHSIYVGIVEHGAVRKSDTAVDHTGLGAIKWSAFDDAEPDRLNILFQHNHSDFPIYYETDW 174 (307)
T ss_dssp -----------HHHHTCCCSCEEEEEEECCEEEECSSSEEEEEECCCEEEEECTTCCGGGGTTTTSSCCTTSCEEECSCH
T ss_pred -----------HHHHHhCCCCcEEEEEEeeceEECCCCEEEEeeeeeEEEEeCCCCcHHHHHHHHHhhhCCCCcEechhH
Confidence 45777666321 1124556788776554443222222222456777888999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCC---CccHHHHHHHHHHHHHHH
Q 019978 278 VTHEVMGGLKNVYAIGAGMVAALTNES---ATSKSVYFAHCTSEMVVM 322 (333)
Q Consensus 278 ~gve~~~alkNv~Ai~~Gi~~gl~~~~---~n~~~~l~~~~~~E~~~l 322 (333)
.+..|.+.+.|+.-.....+.+..++. +.....++..++.|+..+
T Consensus 175 ~~~~W~Kl~~N~~~N~ltal~~~~~g~l~~~~~~~~l~~~l~~E~~~v 222 (307)
T 3ego_A 175 YRLLTGKLIVNACINPLTALLQVKNGELLTTPAYLAFMKLVFQEACRI 222 (307)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCTTHHHHSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhhHHHHHhcCCcchhhcChhHHHHHHHHHHHHHHH
Confidence 999999999999666777777777732 223458999999999998
No 19
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=99.81 E-value=3.1e-19 Score=178.12 Aligned_cols=218 Identities=14% Similarity=0.117 Sum_probs=158.3
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
|||+|||+|+||+++|..|+++ | ++|++|+++++++++++. + .++.+.+++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-G-----~~V~~~D~~~~~v~~l~~---------g--------~~~i~e~gl~----- 54 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-G-----ANVRCIDTDRNKIEQLNS---------G--------TIPIYEPGLE----- 54 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHH---------T--------CSCCCSTTHH-----
T ss_pred CEEEEECcCHHHHHHHHHHHhc-C-----CEEEEEECCHHHHHHHHc---------C--------CCcccCCCHH-----
Confidence 7999999999999999999999 8 999999999987765432 1 2344444432
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch----------hHHHHHHHHHhhhhccCCCCEE
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------ETKEVFEEISRYWKERITVPVI 193 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~----------~~~~vl~~i~~~l~~~~~~~~I 193 (333)
|++.+... ..++.+++|++++++++|+||+|||+. .++++++++.+++++ +++|
T Consensus 55 ------~~l~~~~~-------~~~l~~t~d~~ea~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~---g~iV 118 (450)
T 3gg2_A 55 ------KMIARNVK-------AGRLRFGTEIEQAVPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSR---YILI 118 (450)
T ss_dssp ------HHHHHHHH-------TTSEEEESCHHHHGGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCS---CEEE
T ss_pred ------HHHHhhcc-------cCcEEEECCHHHHHhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCC---CCEE
Confidence 11111000 025888999999999999999999987 899999999999887 6777
Q ss_pred EEeeecCcccccCCccCCCHHHHHHhHhCCC--CCcEEEEcCCCchHHHhc----cCceeEEEe-CChhhHHHHHHHhCC
Q 019978 194 ISLAKGVEAELEAVPRIITPTQMINRATGVP--IENILYLGGPNIASEIYN----KEYANARIC-GAEKWRKPLAKFLRR 266 (333)
Q Consensus 194 vs~~kGi~~~~~~~~~~~~~se~i~~~lg~~--~~~~~vl~GP~~a~ev~~----~~~~~~~~~-~~~~~~~~l~~ll~~ 266 (333)
|..+ +++++ +.+.+.+.+++..+.. ...+.++++|+++.+... ..++.++++ .+++..+.++.+|+.
T Consensus 119 V~~S-Tv~pg-----t~~~l~~~l~~~~~~~~~~~d~~v~~~Pe~a~eG~~~~~~~~p~~ivvG~~~~~~~~~~~~l~~~ 192 (450)
T 3gg2_A 119 VTKS-TVPVG-----SYRLIRKAIQEELDKREVLIDFDIASNPEFLKEGNAIDDFMKPDRVVVGVDSDRARELITSLYKP 192 (450)
T ss_dssp EECS-CCCTT-----HHHHHHHHHHHHHHHTTCCCCEEEEECCCCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTT
T ss_pred EEee-eCCCc-----chHHHHHHHHHhccccCcCcceeEEechhhhcccchhhhccCCCEEEEEcCCHHHHHHHHHHHHH
Confidence 6655 56665 3445666666543210 134779999999987654 445555554 456788999999985
Q ss_pred CCe--EEEecCChhHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHH-HHCCCCC
Q 019978 267 PHF--TVWDNGDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVVM-HGMGRSW 329 (333)
Q Consensus 267 ~~~--~v~~s~Di~gve~~~alkNv~Ai~~Gi~~gl~~~~~n~~~~l~~~~~~E~~~l-~~~G~~~ 329 (333)
..- .++...|+.++|+++...|. ..++....++|+..+ +++|++.
T Consensus 193 ~~~~~~~~~~~d~~~aE~~Kl~~N~------------------~~a~~ia~~nE~~~l~~~~Gid~ 240 (450)
T 3gg2_A 193 MLLNNFRVLFMDIASAEMTKYAANA------------------MLATRISFMNDVANLCERVGADV 240 (450)
T ss_dssp TCCSCCCEEEECHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHHTCCH
T ss_pred HhcCCCeEEecCHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHhCCCH
Confidence 432 14568899999997765554 567777888888888 8888764
No 20
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.79 E-value=1.8e-19 Score=167.20 Aligned_cols=206 Identities=12% Similarity=0.077 Sum_probs=149.2
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
|||+|||+|.||++++..|.+. | ++|++|+|++++++++. +. +
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~-g-----~~V~~~~~~~~~~~~~~---------~~---------------g------- 43 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRR-G-----HYLIGVSRQQSTCEKAV---------ER---------------Q------- 43 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHH---------HT---------------T-------
T ss_pred CEEEEEcCcHHHHHHHHHHHHC-C-----CEEEEEECCHHHHHHHH---------hC---------------C-------
Confidence 6999999999999999999998 8 89999999987554211 00 0
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCccc
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEAE 203 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~~~ 203 (333)
. ...++++++++ .++|+||+|||++.+.++++++.+++++ +++|+++ .++...
T Consensus 44 --~--------------------~~~~~~~~~~~-~~~D~vi~av~~~~~~~~~~~l~~~~~~---~~~vv~~-~~~~~~ 96 (279)
T 2f1k_A 44 --L--------------------VDEAGQDLSLL-QTAKIIFLCTPIQLILPTLEKLIPHLSP---TAIVTDV-ASVKTA 96 (279)
T ss_dssp --S--------------------CSEEESCGGGG-TTCSEEEECSCHHHHHHHHHHHGGGSCT---TCEEEEC-CSCCHH
T ss_pred --C--------------------CccccCCHHHh-CCCCEEEEECCHHHHHHHHHHHHhhCCC---CCEEEEC-CCCcHH
Confidence 0 11245677777 8999999999999999999999988876 6788876 333322
Q ss_pred ccCCccCCCHHHHHHhHhCC--CCCcEE--EEcCCCchH-HHhccCceeEEEe--CChhhHHHHHHHhCCCCeEEEecCC
Q 019978 204 LEAVPRIITPTQMINRATGV--PIENIL--YLGGPNIAS-EIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDNGD 276 (333)
Q Consensus 204 ~~~~~~~~~~se~i~~~lg~--~~~~~~--vl~GP~~a~-ev~~~~~~~~~~~--~~~~~~~~l~~ll~~~~~~v~~s~D 276 (333)
. . +.+.+.++. +.+++. +..||.++. ++..+.++.++.. .+++..+.++++|+..+++++..+|
T Consensus 97 ~--------~-~~~~~~~~~~~~~~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~ 167 (279)
T 2f1k_A 97 I--------A-EPASQLWSGFIGGHPMAGTAAQGIDGAEENLFVNAPYVLTPTEYTDPEQLACLRSVLEPLGVKIYLCTP 167 (279)
T ss_dssp H--------H-HHHHHHSTTCEEEEECCCCSCSSGGGCCTTTTTTCEEEEEECTTCCHHHHHHHHHHHGGGTCEEEECCH
T ss_pred H--------H-HHHHHHhCCEeecCcccCCccCCHHHHhHHHhCCCcEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcCH
Confidence 1 1 222332321 011221 334677665 4455555544432 3567889999999999999999999
Q ss_pred hhHHHHHHHHHHH-HHHHHHHHhccCCCCC----ccHHHHHHHHHHHHHHH
Q 019978 277 LVTHEVMGGLKNV-YAIGAGMVAALTNESA----TSKSVYFAHCTSEMVVM 322 (333)
Q Consensus 277 i~gve~~~alkNv-~Ai~~Gi~~gl~~~~~----n~~~~l~~~~~~E~~~l 322 (333)
....+|+++++|. .+++.++++++...+. +....|+++++.|+..+
T Consensus 168 ~~~~~~~~~~~~~p~~i~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~r~ 218 (279)
T 2f1k_A 168 ADHDQAVAWISHLPVMVSAALIQACAGEKDGDILKLAQNLASSGFRDTSRV 218 (279)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHTCSCHHHHHHHHHHCCHHHHHHHTG
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHhcccccchhHHHhhcCCcccchhcc
Confidence 9999999999996 7888999998876553 45668999999998765
No 21
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=99.74 E-value=7.7e-19 Score=171.78 Aligned_cols=228 Identities=13% Similarity=0.171 Sum_probs=144.3
Q ss_pred CceEEEECCCHHHHHHHHHHHH-hcCCCCCCeeEEEEe---cCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQD-SYGYLRDKVLIRIWR---RPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~-~~G~~~~~~~V~l~~---r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~ 118 (333)
+|||+|||+|+||+++|..|++ + | ++|++|+ |++++++++ +++... ..+..+.++.
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~-G-----~~V~~~~~~~r~~~~~~~~--------~~~~g~-----~~~~~~~~~~- 61 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRD-G-----VEVRVLTLFADEAERWTKA--------LGADEL-----TVIVNEKDGT- 61 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTST-T-----EEEEEECCSTTHHHHHHHH--------HTTSCE-----EEEEECSSSC-
T ss_pred CceEEEECCCHHHHHHHHHHHhCC-C-----CEEEEEeCCCCcHHHHHHH--------Hhhccc-----eeeeecCCCc-
Confidence 4799999999999999999987 6 7 9999999 665544321 111100 0000011000
Q ss_pred hhhcCCcccchhhhhccccccCCCCCCCCeE-EecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEe-
Q 019978 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLK-VVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISL- 196 (333)
Q Consensus 119 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~-~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~- 196 (333)
...++ ..+. +++|++++++++|+||+|||++.++++++++.+++++ +++|++.
T Consensus 62 ----~~~~~------------------~~~~~~~~~~~~a~~~aD~Vilav~~~~~~~v~~~l~~~l~~---~~ivv~~~ 116 (404)
T 3c7a_A 62 ----QTEVK------------------SRPKVITKDPEIAISGADVVILTVPAFAHEGYFQAMAPYVQD---SALIVGLP 116 (404)
T ss_dssp ----EEEEE------------------ECCSEEESCHHHHHTTCSEEEECSCGGGHHHHHHHHTTTCCT---TCEEEETT
T ss_pred ----cceee------------------ccceEEeCCHHHHhCCCCEEEEeCchHHHHHHHHHHHhhCCC---CcEEEEcC
Confidence 00000 1233 6788988889999999999999999999999999887 7888884
Q ss_pred -eecCcccccCCccCCCHHHHHHhH-----h-CCCCCc-EEEEcCCCchHHHhccCcee--EEE-e--C-ChhhHHHHHH
Q 019978 197 -AKGVEAELEAVPRIITPTQMINRA-----T-GVPIEN-ILYLGGPNIASEIYNKEYAN--ARI-C--G-AEKWRKPLAK 262 (333)
Q Consensus 197 -~kGi~~~~~~~~~~~~~se~i~~~-----l-g~~~~~-~~vl~GP~~a~ev~~~~~~~--~~~-~--~-~~~~~~~l~~ 262 (333)
++|+.... .+.+.+. + +....+ .+.+.||+++.++....... ... . . .+...+.+++
T Consensus 117 ~~~G~~~~~---------~~~l~~~~~~~v~~~~~~~~~~~~~~gpg~~v~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~ 187 (404)
T 3c7a_A 117 SQAGFEFQC---------RDILGDKAAAVSMMSFETLPWACRIKEFGRKVEVLGTKSVLAASLIKGTAKTVDPLSTLQML 187 (404)
T ss_dssp CCTTHHHHH---------HHHHGGGGGTSEEEEESSCSEEEEEEETTTEEEEEEECSEEEEEEECCSSCCSCHHHHHHHH
T ss_pred CCccHHHHH---------HHHHHhcCCCeEEEEecCchHhhcccCCCcEEEEEEECceEEEEEccCCcchHHHHHHHHHH
Confidence 44433220 1223321 1 100122 35668899766655433111 112 2 1 2335566666
Q ss_pred HhCCCCeEEEecCChhHHHHHHHHHHHHHHHHHHHhcc------C------CCC--CccHHHHHHHHHHHHHHH-HHC--
Q 019978 263 FLRRPHFTVWDNGDLVTHEVMGGLKNVYAIGAGMVAAL------T------NES--ATSKSVYFAHCTSEMVVM-HGM-- 325 (333)
Q Consensus 263 ll~~~~~~v~~s~Di~gve~~~alkNv~Ai~~Gi~~gl------~------~~~--~n~~~~l~~~~~~E~~~l-~~~-- 325 (333)
++.++++ ..++|+++++|.+ |++++..+++.+. . ++. .+..+.++.++++|+..+ +++
T Consensus 188 ~~~~~~~--~~~~di~~~~l~~---N~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~E~~~va~a~~~ 262 (404)
T 3c7a_A 188 HGAEPVF--RLAKHFLEMLIMS---YSFVHPAILFGRWGSWDGKPVPEAPLFYQGIDQATADMLTACSNECKDVANAIMA 262 (404)
T ss_dssp HCSSSEE--EECSCHHHHHHTT---CTTHHHHHHHHHHTTCCSCCBSSCCBSGGGCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCCCce--eEcCCEeeeeecC---CceeccHHHHHHHHhhhcCCCCCCCccccCCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 6654334 4799999999885 8877777777333 1 211 125679999999999999 899
Q ss_pred ---CCCC
Q 019978 326 ---GRSW 329 (333)
Q Consensus 326 ---G~~~ 329 (333)
|.+.
T Consensus 263 ~~~G~~~ 269 (404)
T 3c7a_A 263 ACPGNDL 269 (404)
T ss_dssp HSTTCCC
T ss_pred hcCCCCc
Confidence 9876
No 22
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.73 E-value=5.7e-17 Score=145.49 Aligned_cols=173 Identities=14% Similarity=0.157 Sum_probs=130.8
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
.|||+|||+|+||+++|..|+++ | ++|++|+|+++
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~-g-----~~V~~~~~~~~--------------------------------------- 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIA-G-----HEVTYYGSKDQ--------------------------------------- 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECTTCC---------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-C-----CEEEEEcCCHH---------------------------------------
Confidence 47999999999999999999999 8 89999987642
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCc-
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE- 201 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~- 201 (333)
+++++|+||+++|++.++++++++.++++ +++++++++|++
T Consensus 54 ----------------------------------~~~~aD~vi~av~~~~~~~v~~~l~~~~~----~~~vi~~~~g~~~ 95 (209)
T 2raf_A 54 ----------------------------------ATTLGEIVIMAVPYPALAALAKQYATQLK----GKIVVDITNPLNF 95 (209)
T ss_dssp ----------------------------------CSSCCSEEEECSCHHHHHHHHHHTHHHHT----TSEEEECCCCBCT
T ss_pred ----------------------------------HhccCCEEEEcCCcHHHHHHHHHHHHhcC----CCEEEEECCCCCc
Confidence 23578999999999999999999988775 478999999997
Q ss_pred ccc--cCCccCCCHHHHHHhHhCCCCCcEE----EEcCCCchHHHhcc-CceeEEEe-CChhhHHHHHHHhCCCCeEEEe
Q 019978 202 AEL--EAVPRIITPTQMINRATGVPIENIL----YLGGPNIASEIYNK-EYANARIC-GAEKWRKPLAKFLRRPHFTVWD 273 (333)
Q Consensus 202 ~~~--~~~~~~~~~se~i~~~lg~~~~~~~----vl~GP~~a~ev~~~-~~~~~~~~-~~~~~~~~l~~ll~~~~~~v~~ 273 (333)
.+. ...++...+++.+++.++. ..+. .++||+++.+...+ .++.+.++ .+++..+.++++|+..+++++.
T Consensus 96 ~~~~~l~~~~~~~~~~~l~~~l~~--~~vv~~~~~~~~p~~~~~~~~g~~~~~~~~~g~~~~~~~~v~~ll~~~G~~~~~ 173 (209)
T 2raf_A 96 DTWDDLVVPADSSAAQELQQQLPD--SQVLKAFNTTFAATLQSGQVNGKEPTTVLVAGNDDSAKQRFTRALADSPLEVKD 173 (209)
T ss_dssp TTSSSBSSCTTCCHHHHHHHHCTT--SEEEECSTTSCHHHHHHSEETTTEECEEEEEESCHHHHHHHHHHTTTSSCEEEE
T ss_pred cccccccCCCCCcHHHHHHHHCCC--CcEEEeeecccHhhccccccCCCCCceeEEcCCCHHHHHHHHHHHHHcCCceEe
Confidence 320 0001234557888887752 2221 12388888766554 23333343 4457899999999999999988
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHhccCCC
Q 019978 274 NGDLVTHEVMGGLKNVYAIGAGMVAALTNE 303 (333)
Q Consensus 274 s~Di~gve~~~alkNv~Ai~~Gi~~gl~~~ 303 (333)
.+| ++.+.++||+.++.+|++.+.+++
T Consensus 174 ~~~---i~~a~~~K~i~~l~~~~~~~~g~g 200 (209)
T 2raf_A 174 AGK---LKRARELEAMGFMQMTLAASEQIG 200 (209)
T ss_dssp EES---GGGHHHHHHHHHHHHHHHHTTSSC
T ss_pred CCC---HhHHHHhcchHHHHHHHHHHcCCC
Confidence 888 456778999999999999988873
No 23
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.70 E-value=4.4e-16 Score=154.38 Aligned_cols=221 Identities=16% Similarity=0.104 Sum_probs=146.8
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
|||+|||+|+||+++|..|++. | ++|++|+++++++++++..+ .+.+.+++.
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~-G-----~~V~~~d~~~~~~~~l~~~~-----------------~~i~e~~l~----- 52 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSAR-G-----HEVIGVDVSSTKIDLINQGK-----------------SPIVEPGLE----- 52 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHTTC-----------------CSSCCTTHH-----
T ss_pred CEEEEECCCHHHHHHHHHHHHC-C-----CEEEEEECCHHHHHHHhCCC-----------------CCcCCCCHH-----
Confidence 7999999999999999999999 8 99999999988776543211 222333221
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh----------HHHHHHHHHhhhhccCCCCEE
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE----------TKEVFEEISRYWKERITVPVI 193 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~----------~~~vl~~i~~~l~~~~~~~~I 193 (333)
|++.++... .++.+++++++++.++|+||+|||+.. ++++++++.+++++...+++|
T Consensus 53 ------~~~~~~~~~-------g~l~~t~~~~~~~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iV 119 (436)
T 1mv8_A 53 ------ALLQQGRQT-------GRLSGTTDFKKAVLDSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTV 119 (436)
T ss_dssp ------HHHHHHHHT-------TCEEEESCHHHHHHTCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEE
T ss_pred ------HHHHhhccc-------CceEEeCCHHHHhccCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEE
Confidence 111110000 147888999888999999999999765 999999999988640003556
Q ss_pred EEeeecCcccccCCccCCCHHHHHHhHhCCCC-CcEEEEcCCCchHHHhc----cCceeEEEeC-ChhhHHHHHHHhCCC
Q 019978 194 ISLAKGVEAELEAVPRIITPTQMINRATGVPI-ENILYLGGPNIASEIYN----KEYANARICG-AEKWRKPLAKFLRRP 267 (333)
Q Consensus 194 vs~~kGi~~~~~~~~~~~~~se~i~~~lg~~~-~~~~vl~GP~~a~ev~~----~~~~~~~~~~-~~~~~~~l~~ll~~~ 267 (333)
|..+ ++.+++ +.+.+.+.+.+..+... ..+.+.++|.++.+... ..+..++++. +++..+.++++|+..
T Consensus 120 V~~S-tv~~g~----t~~~l~~~l~~~~g~~~~~~~~v~~~Pe~~~~G~~~~~~~~~~~iv~G~~~~~~~~~~~~l~~~~ 194 (436)
T 1mv8_A 120 VVRS-TVLPGT----VNNVVIPLIEDCSGKKAGVDFGVGTNPEFLRESTAIKDYDFPPMTVIGELDKQTGDLLEEIYREL 194 (436)
T ss_dssp EECS-CCCTTH----HHHTHHHHHHHHHSCCBTTTBEEEECCCCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTTS
T ss_pred EEeC-CcCCCc----hHHHHHHHHHHhcCcccCCcEEEEECcccccccccchhccCCCEEEEEcCCHHHHHHHHHHHhcc
Confidence 5443 444431 13445566655444211 23567789988765432 2233344443 467788899999988
Q ss_pred CeEEEecCChhHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHH-HHCCCCC
Q 019978 268 HFTVWDNGDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVVM-HGMGRSW 329 (333)
Q Consensus 268 ~~~v~~s~Di~gve~~~alkNv~Ai~~Gi~~gl~~~~~n~~~~l~~~~~~E~~~l-~~~G~~~ 329 (333)
+.+++. .|+...||.+.+-|.+ .++....++|+..+ +++|.+.
T Consensus 195 ~~~v~~-~~~~~ae~~Kl~~N~~------------------~a~~ia~~nE~~~l~~~~Gid~ 238 (436)
T 1mv8_A 195 DAPIIR-KTVEVAEMIKYTCNVW------------------HAAKVTFANEIGNIAKAVGVDG 238 (436)
T ss_dssp SSCEEE-EEHHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHTTSCH
T ss_pred CCCEEc-CCHHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHhCCCH
Confidence 877776 8899999999988862 23344566777777 6666653
No 24
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.70 E-value=5.2e-16 Score=145.34 Aligned_cols=154 Identities=19% Similarity=0.243 Sum_probs=120.2
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCe---eEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV---LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~---~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (333)
+|||+|||+|+||++++..|+++ | + +|++|+|++++++++..
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~-g-----~~~~~V~v~dr~~~~~~~l~~----------------------------- 47 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIAN-G-----YDPNRICVTNRSLDKLDFFKE----------------------------- 47 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHT-T-----CCGGGEEEECSSSHHHHHHHH-----------------------------
T ss_pred CCEEEEEcccHHHHHHHHHHHHC-C-----CCCCeEEEEeCCHHHHHHHHH-----------------------------
Confidence 47999999999999999999999 8 6 89999999976543210
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhh-hhccCCCCEEEEeee
Q 019978 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRY-WKERITVPVIISLAK 198 (333)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~-l~~~~~~~~Ivs~~k 198 (333)
. ..+.++++..++++++|+||+|||++.++++++++.++ +++ +++|||+++
T Consensus 48 -----~--------------------~gi~~~~~~~~~~~~aDvVilav~p~~~~~vl~~l~~~~l~~---~~iiiS~~a 99 (280)
T 3tri_A 48 -----K--------------------CGVHTTQDNRQGALNADVVVLAVKPHQIKMVCEELKDILSET---KILVISLAV 99 (280)
T ss_dssp -----T--------------------TCCEEESCHHHHHSSCSEEEECSCGGGHHHHHHHHHHHHHTT---TCEEEECCT
T ss_pred -----H--------------------cCCEEeCChHHHHhcCCeEEEEeCHHHHHHHHHHHHhhccCC---CeEEEEecC
Confidence 0 03556778888899999999999999999999999998 876 679999999
Q ss_pred cCcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhccCceeEEEe--CChhhHHHHHHHhCCCCeEEEec
Q 019978 199 GVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDN 274 (333)
Q Consensus 199 Gi~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~~~~~~~~~~--~~~~~~~~l~~ll~~~~~~v~~s 274 (333)
|+..+ .+++.++.+ .+ .+...|+++..+..+.... +.. .+++..+.++.+|+..|..+++.
T Consensus 100 gi~~~------------~l~~~l~~~-~~-vvr~mPn~p~~v~~g~~~l-~~~~~~~~~~~~~v~~l~~~iG~~~~v~ 162 (280)
T 3tri_A 100 GVTTP------------LIEKWLGKA-SR-IVRAMPNTPSSVRAGATGL-FANETVDKDQKNLAESIMRAVGLVIWVS 162 (280)
T ss_dssp TCCHH------------HHHHHHTCC-SS-EEEEECCGGGGGTCEEEEE-ECCTTSCHHHHHHHHHHHGGGEEEEECS
T ss_pred CCCHH------------HHHHHcCCC-Ce-EEEEecCChHHhcCccEEE-EeCCCCCHHHHHHHHHHHHHCCCeEEEC
Confidence 98864 367777642 22 4667899998776653322 222 34678899999999999877663
No 25
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=99.70 E-value=5.6e-16 Score=155.64 Aligned_cols=198 Identities=11% Similarity=0.057 Sum_probs=140.9
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCe-eEEEEecCCc----chhhhhhhhHHHHHhhhhhHHHHhhhccc--cc
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGR----SVDRATAEHLFEVINSREDVLRRLIRRCA--YL 114 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~-~V~l~~r~~~----~~~~~~~~~l~~~i~~~~~~~~~~~~~~~--~l 114 (333)
.+|||+|||+|+||+.+|..|+++.| | +|++|+++++ ++++++ ++ +.+. +.
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G-----~~~V~~~D~~~~~~~~kv~~l~---------~g--------~~~i~~~e 74 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPC-----FEKVLGFQRNSKSSGYKIEMLN---------RG--------ESPLKGEE 74 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTT-----CCEEEEECCCCTTTTTHHHHHT---------TT--------CCCSSCCG
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCC-----CCeEEEEECChhHhHHHHHHHH---------hc--------CCCccccC
Confidence 56899999999999999999998624 9 9999999998 766543 21 1223 33
Q ss_pred chhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch------------hHHHHHHHHHh
Q 019978 115 KYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST------------ETKEVFEEISR 182 (333)
Q Consensus 115 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~------------~~~~vl~~i~~ 182 (333)
+++. |++.++.. ..++.+++| .+++.+||+||+|||+. ++..+++.+.+
T Consensus 75 ~gl~-----------~l~~~~~~-------~g~l~~ttd-~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~ 135 (478)
T 3g79_A 75 PGLE-----------ELIGKVVK-------AGKFECTPD-FSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGK 135 (478)
T ss_dssp GGHH-----------HHHHHHHH-------TTCEEEESC-GGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHH
T ss_pred CCHH-----------HHHHhhcc-------cCCeEEeCc-HHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHh
Confidence 3321 11111000 026888888 57889999999999875 37888899999
Q ss_pred hhhccCCCCEEEEeeecCcccccCCccCCCHHH-HHHhHhCCC-CCcEEEEcCCCchHHHhc----cCceeEEEeCChhh
Q 019978 183 YWKERITVPVIISLAKGVEAELEAVPRIITPTQ-MINRATGVP-IENILYLGGPNIASEIYN----KEYANARICGAEKW 256 (333)
Q Consensus 183 ~l~~~~~~~~Ivs~~kGi~~~~~~~~~~~~~se-~i~~~lg~~-~~~~~vl~GP~~a~ev~~----~~~~~~~~~~~~~~ 256 (333)
++++ +++|| ..++++++ +.+.+.+ ++++..|.. ...+.++++|.+..+... ..+..++.+.+++.
T Consensus 136 ~l~~---g~iVV-~~STv~pg-----tt~~v~~~ile~~~g~~~~~d~~v~~~Pe~~~~G~a~~~~~~~~~Iv~G~~~~~ 206 (478)
T 3g79_A 136 YLKP---GMLVV-LESTITPG-----TTEGMAKQILEEESGLKAGEDFALAHAPERVMVGRLLKNIREHDRIVGGIDEAS 206 (478)
T ss_dssp HCCT---TCEEE-ECSCCCTT-----TTTTHHHHHHHHHHCCCBTTTBEEEECCCCCCTTSHHHHHHHSCEEEEESSHHH
T ss_pred hcCC---CcEEE-EeCCCChH-----HHHHHHHHHHHHhcCCCcCCceeEEeCCccCCccchhhhhcCCcEEEEeCCHHH
Confidence 8887 66665 45688886 4566765 443556532 134778999998866442 12334555677788
Q ss_pred HHHHHHHhCCC-CeEEEecCChhHHHHHHHHHHH
Q 019978 257 RKPLAKFLRRP-HFTVWDNGDLVTHEVMGGLKNV 289 (333)
Q Consensus 257 ~~~l~~ll~~~-~~~v~~s~Di~gve~~~alkNv 289 (333)
.+.++.+|+.. +..++...|+...|.+|.+.|.
T Consensus 207 ~~~~~~ly~~~~~~~~~~~~~~~~aE~~Kl~~N~ 240 (478)
T 3g79_A 207 TKRAVELYSPVLTVGQVIPMSATAAEVTKTAENT 240 (478)
T ss_dssp HHHHHHHHGGGCSSCCEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccCCeEEeCCHHHHHHHHHHHHH
Confidence 89999999887 5667778899999999999987
No 26
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=99.68 E-value=2.3e-16 Score=150.58 Aligned_cols=223 Identities=14% Similarity=0.131 Sum_probs=139.5
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
+|||+|||+|+||+.+|..|++. | ++|++|+|+++++++++.++ ..++.+.
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~-g-----~~V~~~~r~~~~~~~~~~~~------------------~~~~~~~----- 54 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALK-G-----QSVLAWDIDAQRIKEIQDRG------------------AIIAEGP----- 54 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHHHT------------------SEEEESS-----
T ss_pred cCeEEEECCCHHHHHHHHHHHhC-C-----CEEEEEeCCHHHHHHHHhcC------------------CeEEecc-----
Confidence 48999999999999999999999 8 99999999987665432210 1111110
Q ss_pred CCcccchhhhhccccccCCCCCCCCe-EEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCc
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPL-KVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i-~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~ 201 (333)
.++ . ...+ .+++++++++.++|+||+|||++...++++++.+++++ +++||++ +|+.
T Consensus 55 --~~~------~----------~~~~~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~l~~~l~~---~~~vv~~-~~~~ 112 (359)
T 1bg6_A 55 --GLA------G----------TAHPDLLTSDIGLAVKDADVILIVVPAIHHASIAANIASYISE---GQLIILN-PGAT 112 (359)
T ss_dssp --SCC------E----------EECCSEEESCHHHHHTTCSEEEECSCGGGHHHHHHHHGGGCCT---TCEEEES-SCCS
T ss_pred --ccc------c----------ccccceecCCHHHHHhcCCEEEEeCCchHHHHHHHHHHHhCCC---CCEEEEc-CCCc
Confidence 000 0 0123 46678888888999999999999999999999998887 7778877 5544
Q ss_pred ccccCCccCCCHHHHHHhHh-------CCCCCcEE-EEcCCCchHHHhc-cCceeEEE--eCChhhHHHHHHHhCCCCeE
Q 019978 202 AELEAVPRIITPTQMINRAT-------GVPIENIL-YLGGPNIASEIYN-KEYANARI--CGAEKWRKPLAKFLRRPHFT 270 (333)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~l-------g~~~~~~~-vl~GP~~a~ev~~-~~~~~~~~--~~~~~~~~~l~~ll~~~~~~ 270 (333)
.+. .+ +.+.+.+.. +....++. .+.||+++..... +....... +.+++..+.++++|.. ++
T Consensus 113 ~~~-----~~-~~~~l~~~~~~~v~~~~~~~~~~~~~~~gpg~v~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~--~~ 184 (359)
T 1bg6_A 113 GGA-----LE-FRKILRENGAPEVTIGETSSMLFTCRSERPGQVTVNAIKGAMDFACLPAAKAGWALEQIGSVLPQ--YV 184 (359)
T ss_dssp SHH-----HH-HHHHHHHTTCCCCEEEEESSCSEEEECSSTTEEEEEEECSCEEEEEESGGGHHHHHHHHTTTCTT--EE
T ss_pred hHH-----HH-HHHHHHhcCCCCeEEEEecCCcEEEEeCCCCEEEEEEeecceEEEeccccccHHHHHHHHHHhhh--cE
Confidence 321 11 223333311 00012233 3467776542221 22221122 1233467788888854 43
Q ss_pred EEecCChhHHHHHHHHHHHHHH--------HHHHHhc----cCCC--CCccHHHHHHHHHHHHHHH-HHCCCCCC
Q 019978 271 VWDNGDLVTHEVMGGLKNVYAI--------GAGMVAA----LTNE--SATSKSVYFAHCTSEMVVM-HGMGRSWQ 330 (333)
Q Consensus 271 v~~s~Di~gve~~~alkNv~Ai--------~~Gi~~g----l~~~--~~n~~~~l~~~~~~E~~~l-~~~G~~~~ 330 (333)
.++|+ |++++||+.++ .+|..+. +.++ ..+..+.++.++++|+..+ +++|.+.+
T Consensus 185 --~~~di----~~k~~~nvn~~~n~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~va~a~G~~~~ 253 (359)
T 1bg6_A 185 --AVENV----LHTSLTNVNAVMHPLPTLLNAARCESGTPFQYYLEGITPSVGSLAEKVDAERIAIAKAFDLNVP 253 (359)
T ss_dssp --ECSCH----HHHHHCCHHHHHTHHHHHTTHHHHHTTCCCBHHHHHCCHHHHHHHHHHHHHHHHHHHTTTCCCC
T ss_pred --EcCCh----HhhhccCCCccccHHHHHhhhchhhcCCccchhhcCCCHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 46775 88999887655 2333321 1110 0234579999999999999 99998763
No 27
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.68 E-value=9.8e-16 Score=140.21 Aligned_cols=162 Identities=17% Similarity=0.107 Sum_probs=118.5
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
|||+|||+|+||++++..|.++ |++.+ .+|++|+|++++++++.. .
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~-g~~~~-~~V~~~~r~~~~~~~~~~--------~------------------------ 48 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK-NIVSS-NQIICSDLNTANLKNASE--------K------------------------ 48 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TSSCG-GGEEEECSCHHHHHHHHH--------H------------------------
T ss_pred CeEEEECccHHHHHHHHHHHhC-CCCCC-CeEEEEeCCHHHHHHHHH--------H------------------------
Confidence 7999999999999999999999 81111 299999999876543210 0
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCccc
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEAE 203 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~~~ 203 (333)
..+..+++++++++++|+||+|||++.++++++++.+++++ +++|||.++|+..+
T Consensus 49 ----------------------~g~~~~~~~~e~~~~aDvVilav~~~~~~~v~~~l~~~l~~---~~~vvs~~~gi~~~ 103 (247)
T 3gt0_A 49 ----------------------YGLTTTTDNNEVAKNADILILSIKPDLYASIINEIKEIIKN---DAIIVTIAAGKSIE 103 (247)
T ss_dssp ----------------------HCCEECSCHHHHHHHCSEEEECSCTTTHHHHC---CCSSCT---TCEEEECSCCSCHH
T ss_pred ----------------------hCCEEeCChHHHHHhCCEEEEEeCHHHHHHHHHHHHhhcCC---CCEEEEecCCCCHH
Confidence 02445678888889999999999999999999999998876 78899999998864
Q ss_pred ccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhccCceeEEE--eCChhhHHHHHHHhCCCCeEEEecCChhH
Q 019978 204 LEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARI--CGAEKWRKPLAKFLRRPHFTVWDNGDLVT 279 (333)
Q Consensus 204 ~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~~~~~~~~~--~~~~~~~~~l~~ll~~~~~~v~~s~Di~g 279 (333)
.+++.++.. ...+...|+++..+..+... ++. ..+++..+.++.+|+..|..++..++...
T Consensus 104 ------------~l~~~~~~~--~~~v~~~p~~p~~~~~g~~~-~~~~~~~~~~~~~~~~~l~~~~G~~~~~~e~~~d 166 (247)
T 3gt0_A 104 ------------STENAFNKK--VKVVRVMPNTPALVGEGMSA-LCPNEMVTEKDLEDVLNIFNSFGQTEIVSEKLMD 166 (247)
T ss_dssp ------------HHHHHHCSC--CEEEEEECCGGGGGTCEEEE-EEECTTCCHHHHHHHHHHHGGGEEEEECCGGGHH
T ss_pred ------------HHHHHhCCC--CcEEEEeCChHHHHcCceEE-EEeCCCCCHHHHHHHHHHHHhCCCEEEeCHHHcc
Confidence 366777532 23456789998877665322 222 24567889999999999887777665443
No 28
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.66 E-value=9.6e-16 Score=146.00 Aligned_cols=165 Identities=14% Similarity=0.135 Sum_probs=121.8
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc--chhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR--SVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~--~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
+|||+|||+|+||++||..|+++ |.+.+ ++|++|+|+++ ++++++ +
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~-G~~~~-~~V~v~~r~~~~~~~~~l~---------~--------------------- 69 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAA-GVLAA-HKIMASSPDMDLATVSALR---------K--------------------- 69 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHT-TSSCG-GGEEEECSCTTSHHHHHHH---------H---------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCCCc-ceEEEECCCccHHHHHHHH---------H---------------------
Confidence 47999999999999999999998 73222 68999999985 433211 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecC
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi 200 (333)
..+.++++..++++++|+||+|||++.++++++++.+.+++ +++||++++|+
T Consensus 70 -------------------------~G~~~~~~~~e~~~~aDvVilav~~~~~~~vl~~l~~~l~~---~~ivvs~s~gi 121 (322)
T 2izz_A 70 -------------------------MGVKLTPHNKETVQHSDVLFLAVKPHIIPFILDEIGADIED---RHIVVSCAAGV 121 (322)
T ss_dssp -------------------------HTCEEESCHHHHHHHCSEEEECSCGGGHHHHHHHHGGGCCT---TCEEEECCTTC
T ss_pred -------------------------cCCEEeCChHHHhccCCEEEEEeCHHHHHHHHHHHHhhcCC---CCEEEEeCCCC
Confidence 02445567778888999999999999999999999988876 78999999998
Q ss_pred cccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhccCceeEEEeCC---hhhHHHHHHHhCCCCeEEEecCCh
Q 019978 201 EAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGA---EKWRKPLAKFLRRPHFTVWDNGDL 277 (333)
Q Consensus 201 ~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~~~~~~~~~~~~---~~~~~~l~~ll~~~~~~v~~s~Di 277 (333)
... .+.+.+.+.++. . ..+...|+++.++..+. .++..++ ++..+.++++|+..|+.++..+|+
T Consensus 122 ~~~--------~l~~~l~~~~~~--~-~vv~~~p~~p~~~~~g~--~v~~~g~~~~~~~~~~v~~ll~~~G~~~~~~e~~ 188 (322)
T 2izz_A 122 TIS--------SIEKKLSAFRPA--P-RVIRCMTNTPVVVREGA--TVYATGTHAQVEDGRLMEQLLSSVGFCTEVEEDL 188 (322)
T ss_dssp CHH--------HHHHHHHTTSSC--C-EEEEEECCGGGGGTCEE--EEEEECTTCCHHHHHHHHHHHHTTEEEEECCGGG
T ss_pred CHH--------HHHHHHhhcCCC--C-eEEEEeCCcHHHHcCCe--EEEEeCCCCCHHHHHHHHHHHHhCCCEEEeCHHH
Confidence 754 123334333321 2 34667899888776653 2223333 567889999999999999888877
Q ss_pred hHH
Q 019978 278 VTH 280 (333)
Q Consensus 278 ~gv 280 (333)
...
T Consensus 189 ~~~ 191 (322)
T 2izz_A 189 IDA 191 (322)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 29
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.65 E-value=1.7e-15 Score=141.46 Aligned_cols=170 Identities=18% Similarity=0.181 Sum_probs=119.9
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
|||+|||+|.||..++..|++. | ++|.+|+|++++++++..
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~-g-----~~V~~~~~~~~~~~~~~~--------------------------------- 46 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA-G-----YSLVVSDRNPEAIADVIA--------------------------------- 46 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHH---------------------------------
T ss_pred ceEEEECchHHHHHHHHHHHhC-C-----CEEEEEeCCHHHHHHHHH---------------------------------
Confidence 6999999999999999999998 8 899999999865442110
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecC-chhHHHHH---HHHHhhhhccCCCCEEEEeeec
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLP-STETKEVF---EEISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVp-s~~~~~vl---~~i~~~l~~~~~~~~Ivs~~kG 199 (333)
..+...++++++++++|+||+++| +..++.++ +++.+.+++ +++||++++|
T Consensus 47 ----------------------~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l~~~l~~---~~~vv~~s~~ 101 (299)
T 1vpd_A 47 ----------------------AGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKP---GTVLIDMSSI 101 (299)
T ss_dssp ----------------------TTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHCCT---TCEEEECSCC
T ss_pred ----------------------CCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcchHhhcCCC---CCEEEECCCC
Confidence 023445678788889999999999 56788888 678888876 7888998887
Q ss_pred CcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHh-ccCceeEEEeCChhhHHHHHHHhCCCCeEEEecCChh
Q 019978 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIY-NKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLV 278 (333)
Q Consensus 200 i~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~-~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~s~Di~ 278 (333)
.... .+.+.+.++.. .+.++..|....... ......++.+++++..+.++++|+..+++++..+|.-
T Consensus 102 ~~~~----------~~~l~~~~~~~--g~~~~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g~~~~~~~~~~ 169 (299)
T 1vpd_A 102 APLA----------SREISDALKAK--GVEMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVHTGDIG 169 (299)
T ss_dssp CHHH----------HHHHHHHHHTT--TCEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHHHHHHTTEEEEEEEESTT
T ss_pred CHHH----------HHHHHHHHHHc--CCeEEEecCCCCHhHHhcCCEEEEeCCCHHHHHHHHHHHHHHcCCeEEeCCcC
Confidence 6532 12344444321 122333444332211 1112223345677788999999999999998888877
Q ss_pred HHHHHHHHHHH
Q 019978 279 THEVMGGLKNV 289 (333)
Q Consensus 279 gve~~~alkNv 289 (333)
...|.+.+.|.
T Consensus 170 ~~~~~Kl~~n~ 180 (299)
T 1vpd_A 170 AGNVTKLANQV 180 (299)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77888877775
No 30
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=99.65 E-value=1e-15 Score=153.82 Aligned_cols=220 Identities=13% Similarity=0.103 Sum_probs=146.4
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
+|||+|||+|+||+.+|..|+++ | .+++|++|++++++++.++. +. .+.+.+++.
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~-g---~g~~V~~~D~~~~~v~~l~~---------g~--------~~i~e~gl~---- 63 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHK-C---PHITVTVVDMNTAKIAEWNS---------DK--------LPIYEPGLD---- 63 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHH-C---TTSEEEEECSCHHHHHHHTS---------SS--------CSSCCTTHH----
T ss_pred CCEEEEECCCHHHHHHHHHHHhc-C---CCCEEEEEECCHHHHHHHHC---------CC--------CCcCCCCHH----
Confidence 57999999999999999999987 3 12799999999987765432 10 122222211
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch---------------hHHHHHHHHHhhhhcc
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST---------------ETKEVFEEISRYWKER 187 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~---------------~~~~vl~~i~~~l~~~ 187 (333)
|++.++. ..++.+++|+++++.++|+||+|||+. .+.++++++.+++++
T Consensus 64 -------~~~~~~~--------~~~l~~t~~~~~~~~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~- 127 (481)
T 2o3j_A 64 -------EIVFAAR--------GRNLFFSSDIPKAIAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGG- 127 (481)
T ss_dssp -------HHHHHHB--------TTTEEEESCHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCS-
T ss_pred -------HHHHHhh--------cCCEEEECCHHHHhhcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCC-
Confidence 1111100 015788899888889999999998763 489999999999887
Q ss_pred CCCCEEEEeeecCcccccCCccCCCHHHHHHhHhCC-CCCcEEEEcCCCchHHHhc----cCceeEEEeCCh-----hhH
Q 019978 188 ITVPVIISLAKGVEAELEAVPRIITPTQMINRATGV-PIENILYLGGPNIASEIYN----KEYANARICGAE-----KWR 257 (333)
Q Consensus 188 ~~~~~Ivs~~kGi~~~~~~~~~~~~~se~i~~~lg~-~~~~~~vl~GP~~a~ev~~----~~~~~~~~~~~~-----~~~ 257 (333)
+++||..+ ++.+++ .+.+.+.+.+..+. ....+.+.++|.++.+... ..+..++++++. +..
T Consensus 128 --g~iVV~~S-Tv~~gt-----~~~l~~~l~~~~~~~~~~d~~v~~~Pe~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~ 199 (481)
T 2o3j_A 128 --PKIVVEKS-TVPVKA-----AESIGCILREAQKNNENLKFQVLSNPEFLAEGTAMKDLANPDRVLIGGESSPEGLQAV 199 (481)
T ss_dssp --CEEEEECS-CCCTTH-----HHHHHHHHHHHTC----CCEEEEECCCCCCTTCHHHHHHSCSCEEEEECSSHHHHHHH
T ss_pred --CCEEEECC-CCCCCH-----HHHHHHHHHHhhCcCcCCceEEEeCcccccccchhhcccCCCEEEEEecCchhhHHHH
Confidence 66666433 555542 23344555542221 1133567899998765431 123334443322 467
Q ss_pred HHHHHHhCCCCe-EEEecCChhHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHH-HHCCCCC
Q 019978 258 KPLAKFLRRPHF-TVWDNGDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVVM-HGMGRSW 329 (333)
Q Consensus 258 ~~l~~ll~~~~~-~v~~s~Di~gve~~~alkNv~Ai~~Gi~~gl~~~~~n~~~~l~~~~~~E~~~l-~~~G~~~ 329 (333)
+.++.+|+..+. .++...|+...||.|.+.|.+ .++....++|+..+ +++|.+.
T Consensus 200 ~~l~~l~~~~~~~~~~~~~d~~~ae~~Kl~~N~~------------------~a~~ia~~nE~~~la~~~Gid~ 255 (481)
T 2o3j_A 200 AELVRIYENWVPRNRIITTNTWSSELSKLVANAF------------------LAQRISSINSISAVCEATGAEI 255 (481)
T ss_dssp HHHHHHHHTTSCGGGEEEEEHHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHSCCH
T ss_pred HHHHHHHHhhcCCCeEEecCHHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHhCcCH
Confidence 888899988774 667788999999999988873 45556678888888 7887764
No 31
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.65 E-value=8.5e-16 Score=143.49 Aligned_cols=171 Identities=14% Similarity=0.095 Sum_probs=119.2
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
||||+|||+|.||+++|..|++. | |+|++|+|++++++++..
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~-G-----~~V~~~dr~~~~~~~~~~-------------------------------- 42 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRA-G-----FDVTVWNRNPAKCAPLVA-------------------------------- 42 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHH-T-----CCEEEECSSGGGGHHHHH--------------------------------
T ss_pred CCeEEEEccCHHHHHHHHHHHHC-C-----CeEEEEcCCHHHHHHHHH--------------------------------
Confidence 47999999999999999999999 8 999999999987653211
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH---HHHHhhhhccCCCCEEEEeee
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF---EEISRYWKERITVPVIISLAK 198 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-~~~~vl---~~i~~~l~~~~~~~~Ivs~~k 198 (333)
..+..+++++++++++|+||++||+. .+++++ +.+.+.+++ +++||.++.
T Consensus 43 -----------------------~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l~~~l~~---g~~vv~~st 96 (287)
T 3pdu_A 43 -----------------------LGARQASSPAEVCAACDITIAMLADPAAAREVCFGANGVLEGIGG---GRGYIDMST 96 (287)
T ss_dssp -----------------------HTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGTCCT---TCEEEECSC
T ss_pred -----------------------CCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhhhhcccC---CCEEEECCC
Confidence 02445678888899999999999986 889998 788887766 678887764
Q ss_pred cCcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHH--HhccCceeEEEeCChhhHHHHHHHhCCCCeEEEecCC
Q 019978 199 GVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASE--IYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGD 276 (333)
Q Consensus 199 Gi~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~e--v~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~s~D 276 (333)
+-... .+.+.+.+.+ .| ..++.+|.+... ...+.. .++++++++..+.++.+|+..+.++....+
T Consensus 97 ~~~~~------~~~~~~~~~~-~g-----~~~~~~pv~g~~~~a~~g~l-~~~~gg~~~~~~~~~~ll~~~g~~~~~~g~ 163 (287)
T 3pdu_A 97 VDDET------STAIGAAVTA-RG-----GRFLEAPVSGTKKPAEDGTL-IILAAGDQSLFTDAGPAFAALGKKCLHLGE 163 (287)
T ss_dssp CCHHH------HHHHHHHHHH-TT-----CEEEECCEECCHHHHHHTCE-EEEEEECHHHHHHTHHHHHHHEEEEEECSS
T ss_pred CCHHH------HHHHHHHHHH-cC-----CEEEECCccCCHHHHhcCCE-EEEEeCCHHHHHHHHHHHHHhCCCEEEcCC
Confidence 32221 1122222222 12 223344543222 222322 234566778889999999988888887777
Q ss_pred hhHHHHHHHHHHHH
Q 019978 277 LVTHEVMGGLKNVY 290 (333)
Q Consensus 277 i~gve~~~alkNv~ 290 (333)
.-..++.+...|.+
T Consensus 164 ~g~~~~~Kl~~N~~ 177 (287)
T 3pdu_A 164 VGQGARMKLVVNMI 177 (287)
T ss_dssp TTHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHH
Confidence 66678888887863
No 32
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.65 E-value=2.1e-16 Score=146.77 Aligned_cols=179 Identities=16% Similarity=0.109 Sum_probs=119.6
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCe--eEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~--~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
||||+|||+|+||+++|..|++. | + +|++|+|++++++.+. + . +.
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~-g-----~~~~V~~~d~~~~~~~~~~---------~--------------~-g~--- 47 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRS-G-----FKGKIYGYDINPESISKAV---------D--------------L-GI--- 47 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHT-T-----CCSEEEEECSCHHHHHHHH---------H--------------T-TS---
T ss_pred CcEEEEEecCHHHHHHHHHHHhc-C-----CCcEEEEEeCCHHHHHHHH---------H--------------C-CC---
Confidence 47999999999999999999998 8 7 8999999986543211 0 0 00
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc-CCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeec
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW-DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~-~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kG 199 (333)
....+++++++++ ++|+||+|||++.+.++++++.+++++ +++|+.++++
T Consensus 48 --------------------------~~~~~~~~~~~~~~~aDvVilavp~~~~~~v~~~l~~~l~~---~~iv~~~~~~ 98 (281)
T 2g5c_A 48 --------------------------IDEGTTSIAKVEDFSPDFVMLSSPVRTFREIAKKLSYILSE---DATVTDQGSV 98 (281)
T ss_dssp --------------------------CSEEESCGGGGGGTCCSEEEECSCHHHHHHHHHHHHHHSCT---TCEEEECCSC
T ss_pred --------------------------cccccCCHHHHhcCCCCEEEEcCCHHHHHHHHHHHHhhCCC---CcEEEECCCC
Confidence 1123466777788 999999999999999999999988876 6766665433
Q ss_pred CcccccCCccCCCHHHHHHhHhCC---CCCcEE--EEcCCCchH-HHhccCceeEEE--eCChhhHHHHHHHhCCCCeEE
Q 019978 200 VEAELEAVPRIITPTQMINRATGV---PIENIL--YLGGPNIAS-EIYNKEYANARI--CGAEKWRKPLAKFLRRPHFTV 271 (333)
Q Consensus 200 i~~~~~~~~~~~~~se~i~~~lg~---~~~~~~--vl~GP~~a~-ev~~~~~~~~~~--~~~~~~~~~l~~ll~~~~~~v 271 (333)
... ..+.+.+.++. +.+++. ..+||.++. ++..+.++.++. +.+++..+.++++|+..++++
T Consensus 99 -~~~---------~~~~l~~~l~~~~v~~~p~~~~~~~gp~~a~~~l~~g~~~~~~~~~~~~~~~~~~v~~l~~~~g~~~ 168 (281)
T 2g5c_A 99 -KGK---------LVYDLENILGKRFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGVV 168 (281)
T ss_dssp -CTH---------HHHHHHHHHGGGEECEEEECCCSCCSGGGCCSSTTTTCEEEECCCSSSCHHHHHHHHHHHHHTTCEE
T ss_pred -cHH---------HHHHHHHhccccceeeccccCCccCChhhhhhHHhCCCCEEEecCCCCCHHHHHHHHHHHHHcCCEE
Confidence 221 11233443321 111211 223566654 334554443332 345678899999999999999
Q ss_pred EecCChhH---HHHHHHHHHHHHHH
Q 019978 272 WDNGDLVT---HEVMGGLKNVYAIG 293 (333)
Q Consensus 272 ~~s~Di~g---ve~~~alkNv~Ai~ 293 (333)
+..++... +.+++.+.++++.+
T Consensus 169 ~~~~~~~~d~~~~~~~~~~~~~a~~ 193 (281)
T 2g5c_A 169 EYMSPELHDYVFGVVSHLPHAVAFA 193 (281)
T ss_dssp EECCHHHHHHHHHHHTHHHHHHHHH
T ss_pred EEcCHHHHHHHHHHHHHHHHHHHHH
Confidence 88887776 45666677765443
No 33
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.65 E-value=2.1e-15 Score=136.08 Aligned_cols=170 Identities=14% Similarity=0.161 Sum_probs=122.6
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEE-EecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRI-WRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l-~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
+|||+|||+|+||+++|..|+++ | ++|++ |+|++++++++..+ +
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~-g-----~~V~~v~~r~~~~~~~l~~~----------------------~------- 67 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAA-Q-----IPAIIANSRGPASLSSVTDR----------------------F------- 67 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHT-T-----CCEEEECTTCGGGGHHHHHH----------------------H-------
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CEEEEEECCCHHHHHHHHHH----------------------h-------
Confidence 48999999999999999999999 8 89999 99998876542210 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCc
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~ 201 (333)
.+..+.+..+++.++|+||+|||++.+.++++++.+ ++ +++||++++|++
T Consensus 68 -------------------------g~~~~~~~~~~~~~aDvVilavp~~~~~~v~~~l~~-~~----~~ivi~~~~g~~ 117 (220)
T 4huj_A 68 -------------------------GASVKAVELKDALQADVVILAVPYDSIADIVTQVSD-WG----GQIVVDASNAID 117 (220)
T ss_dssp -------------------------TTTEEECCHHHHTTSSEEEEESCGGGHHHHHTTCSC-CT----TCEEEECCCCBC
T ss_pred -------------------------CCCcccChHHHHhcCCEEEEeCChHHHHHHHHHhhc-cC----CCEEEEcCCCCC
Confidence 011122334557899999999999999999999877 43 579999999996
Q ss_pred ccccCC--ccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhccCc------eeEEE-eCChhhHHHHHHHhCCCCeEEE
Q 019978 202 AELEAV--PRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEY------ANARI-CGAEKWRKPLAKFLRRPHFTVW 272 (333)
Q Consensus 202 ~~~~~~--~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~~~~------~~~~~-~~~~~~~~~l~~ll~~~~~~v~ 272 (333)
...... .+.....+.+++.++. . ..+...|+.+..+....+ ..++. +.+++..+.++++|+..+++++
T Consensus 118 ~~~~~~~~~~~~~~~~~l~~~l~~--~-~vv~~~~~~~~~v~~~g~~~~~~~~~v~~~g~~~~~~~~v~~l~~~~G~~~~ 194 (220)
T 4huj_A 118 FPAFKPRDLGGRLSTEIVSELVPG--A-KVVKAFNTLPAAVLAADPDKGTGSRVLFLSGNHSDANRQVAELISSLGFAPV 194 (220)
T ss_dssp TTTCCBCCCTTCCHHHHHHHHSTT--C-EEEEESCSSCHHHHTSCSBCSSCEEEEEEEESCHHHHHHHHHHHHHTTCEEE
T ss_pred cccccccccCCCcHHHHHHHHCCC--C-CEEECCCCCCHHHhhhCcccCCCCeeEEEeCCCHHHHHHHHHHHHHhCCCeE
Confidence 110000 0234567888888862 2 346677888776665222 22333 4566789999999999999999
Q ss_pred ecCChhHH
Q 019978 273 DNGDLVTH 280 (333)
Q Consensus 273 ~s~Di~gv 280 (333)
...++...
T Consensus 195 ~~G~l~~a 202 (220)
T 4huj_A 195 DLGTLAAS 202 (220)
T ss_dssp ECCSHHHH
T ss_pred eeCChhhc
Confidence 88887654
No 34
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=99.64 E-value=1.4e-15 Score=149.38 Aligned_cols=205 Identities=15% Similarity=0.071 Sum_probs=137.4
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
|||+|||+|+||+.+|..|++ | |+|++|+|+++++++++..+. +.+.++..
T Consensus 1 MkI~VIG~G~vG~~~A~~La~--G-----~~V~~~d~~~~~~~~l~~~~~-----------------~i~e~~l~----- 51 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL--Q-----NEVTIVDILPSKVDKINNGLS-----------------PIQDEYIE----- 51 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT--T-----SEEEEECSCHHHHHHHHTTCC-----------------SSCCHHHH-----
T ss_pred CEEEEECCCHHHHHHHHHHhC--C-----CEEEEEECCHHHHHHHHcCCC-----------------CcCCCCHH-----
Confidence 799999999999999999986 5 899999999887765432110 11111110
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-----------hHHHHHHHHHhhhhccCCCCE
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-----------ETKEVFEEISRYWKERITVPV 192 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-----------~~~~vl~~i~~~l~~~~~~~~ 192 (333)
|++.+. ..++.++++++++++++|+||+|||+. .++++++.+.+ +++ +++
T Consensus 52 ------~~~~~~---------~~~l~~t~~~~~~~~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~---~~i 112 (402)
T 1dlj_A 52 ------YYLKSK---------QLSIKATLDSKAAYKEAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNS---HAT 112 (402)
T ss_dssp ------HHHHHS---------CCCEEEESCHHHHHHHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCS---SCE
T ss_pred ------HHHHhc---------cCcEEEeCCHHHHhcCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCC---CCE
Confidence 111110 014678889888889999999999987 69999999999 876 677
Q ss_pred EEE-eeecCcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhc----cCceeEEEeCCh-------hhHHHH
Q 019978 193 IIS-LAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYN----KEYANARICGAE-------KWRKPL 260 (333)
Q Consensus 193 Ivs-~~kGi~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~----~~~~~~~~~~~~-------~~~~~l 260 (333)
||. .+++.... +.+.+.++.. .++++|.+..+... ..+..+++++++ +.++.+
T Consensus 113 VV~~ST~~~g~~-----------~~l~~~~~~~----~v~~~Pe~~~~G~a~~~~~~~~riviG~~~~~~~~~~~~~~~~ 177 (402)
T 1dlj_A 113 LIIKSTIPIGFI-----------TEMRQKFQTD----RIIFSPEFLRESKALYDNLYPSRIIVSCEENDSPKVKADAEKF 177 (402)
T ss_dssp EEECSCCCTTHH-----------HHHHHHTTCS----CEEECCCCCCTTSTTHHHHSCSCEEEECCTTSCHHHHHHHHHH
T ss_pred EEEeCCCCccHH-----------HHHHHHhCCC----eEEECCccccCcchhhcccCCCEEEEeCCCcccchhHHHHHHH
Confidence 765 45554432 4455666532 35678887654321 112234444443 567888
Q ss_pred HHHhCCCCeE---EEecCChhHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHH-HHCCCCC
Q 019978 261 AKFLRRPHFT---VWDNGDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVVM-HGMGRSW 329 (333)
Q Consensus 261 ~~ll~~~~~~---v~~s~Di~gve~~~alkNv~Ai~~Gi~~gl~~~~~n~~~~l~~~~~~E~~~l-~~~G~~~ 329 (333)
.++|...+++ ++...|+...||.+.+.|.+ .++....++|+..+ +++|.+.
T Consensus 178 ~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~------------------~a~~ia~~nE~~~l~~~~Gid~ 232 (402)
T 1dlj_A 178 ALLLKSAAKKNNVPVLIMGASEAEAVKLFANTY------------------LALRVAYFNELDTYAESRKLNS 232 (402)
T ss_dssp HHHHHHHCSCSCCCEEEECHHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHTTCCH
T ss_pred HHHHhhhhccCCceEEecChHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHhCCCH
Confidence 8888765554 46677899999999999974 22334456777777 7777654
No 35
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=99.63 E-value=3e-15 Score=148.56 Aligned_cols=193 Identities=15% Similarity=0.084 Sum_probs=134.2
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
-.|.+|||+|+||+.+|..|+++ | |+|++|++++++++.++. + +.+.+.+++.
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~-G-----~~V~~~D~~~~kv~~L~~---------g--------~~pi~epgl~---- 63 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKH-G-----VDVLGVDINQQTIDKLQN---------G--------QISIEEPGLQ---- 63 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHT---------T--------CCSSCCTTHH----
T ss_pred CCccEEEeeCHHHHHHHHHHHHC-C-----CEEEEEECCHHHHHHHHC---------C--------CCCcCCCCHH----
Confidence 36999999999999999999999 8 999999999998876542 2 2345555432
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh------------HHHHHHHHHhhhhccCCC
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE------------TKEVFEEISRYWKERITV 190 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~------------~~~vl~~i~~~l~~~~~~ 190 (333)
|++.+.+.- .++.+++|+ ++||+||+|||+.. +..+.+.+.+++++ +
T Consensus 64 -------~ll~~~~~~-------g~l~~ttd~----~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~---g 122 (431)
T 3ojo_A 64 -------EVYEEVLSS-------GKLKVSTTP----EASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKK---G 122 (431)
T ss_dssp -------HHHHHHHHT-------TCEEEESSC----CCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCT---T
T ss_pred -------HHHHhhccc-------CceEEeCch----hhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCC---C
Confidence 222211100 257888873 48999999999754 78888999998887 5
Q ss_pred CEEEEeeecCcccccCCccCCCHHHHHHhHhCCC-CCcEEEEcCCCchHHHhc----cCceeEEEeCChhhHHHHHHHhC
Q 019978 191 PVIISLAKGVEAELEAVPRIITPTQMINRATGVP-IENILYLGGPNIASEIYN----KEYANARICGAEKWRKPLAKFLR 265 (333)
Q Consensus 191 ~~Ivs~~kGi~~~~~~~~~~~~~se~i~~~lg~~-~~~~~vl~GP~~a~ev~~----~~~~~~~~~~~~~~~~~l~~ll~ 265 (333)
++|| ..+++++++ .+.+.+.+.+..|.. ...+.++++|.+..+... ..+..++.+.+++..+.++.+|+
T Consensus 123 ~iVV-~~STV~pgt-----t~~v~~~i~e~~g~~~~~d~~v~~~Pe~~~~G~A~~~~~~p~~Iv~G~~~~~~~~~~~ly~ 196 (431)
T 3ojo_A 123 NTII-VESTIAPKT-----MDDFVKPVIENLGFTIGEDIYLVHCPERVLPGKILEELVHNNRIIGGVTKACIEAGKRVYR 196 (431)
T ss_dssp EEEE-ECSCCCTTH-----HHHTHHHHHHTTTCCBTTTEEEEECCCCCCTTSHHHHHHHSCEEEEESSHHHHHHHHHHHT
T ss_pred CEEE-EecCCChhH-----HHHHHHHHHHHcCCCcCCCeEEEECCCcCCCcchhhcccCCCEEEEeCCHHHHHHHHHHHH
Confidence 6555 555888763 344444444444421 234789999988665431 12444555667788999999998
Q ss_pred CCCeEEEecCChhHHHHHHHHHHH
Q 019978 266 RPHFTVWDNGDLVTHEVMGGLKNV 289 (333)
Q Consensus 266 ~~~~~v~~s~Di~gve~~~alkNv 289 (333)
..+-......|+...|.++..-|.
T Consensus 197 ~~~~~~~~~~~~~~AE~~Kl~~N~ 220 (431)
T 3ojo_A 197 TFVQGEMIETDARTAEMSKLMENT 220 (431)
T ss_dssp TTCCSCEEEEEHHHHHHHHHHHHH
T ss_pred HHhCCcEEeCCHHHHHHHHHHHHH
Confidence 765434444788889999988886
No 36
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.63 E-value=3.2e-15 Score=139.61 Aligned_cols=172 Identities=15% Similarity=0.098 Sum_probs=119.2
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
|||+|||+|.||+++|..|++. | ++|++|+|++++++++..
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~-G-----~~V~~~dr~~~~~~~~~~--------------------------------- 42 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA-G-----CSVTIWNRSPEKAEELAA--------------------------------- 42 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSGGGGHHHHH---------------------------------
T ss_pred CEEEEEeecHHHHHHHHHHHHC-C-----CeEEEEcCCHHHHHHHHH---------------------------------
Confidence 7999999999999999999999 8 999999999886643210
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecC-chhHHHHH---HHHHhhhhccCCCCEEEEeeec
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLP-STETKEVF---EEISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVp-s~~~~~vl---~~i~~~l~~~~~~~~Ivs~~kG 199 (333)
..+..+++++++++++|+||+||| +..+++++ +++.+.+++ +++||+++ +
T Consensus 43 ----------------------~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~---~~~vi~~s-t 96 (287)
T 3pef_A 43 ----------------------LGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGVLEGIGE---GRGYVDMS-T 96 (287)
T ss_dssp ----------------------TTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHCCT---TCEEEECS-C
T ss_pred ----------------------CCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchHhhcCCC---CCEEEeCC-C
Confidence 034566788898999999999999 56899999 888888876 67777764 4
Q ss_pred CcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhccCceeEEEeCChhhHHHHHHHhCCCCeEEEecCChhH
Q 019978 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVT 279 (333)
Q Consensus 200 i~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~s~Di~g 279 (333)
..+.+ .+.+.+.+.+ .+.......+..+|..+ ..+ ....+++++++..+.++.+|+..+.+++...+.-.
T Consensus 97 ~~~~~-----~~~~~~~~~~-~g~~~~~~pv~g~~~~a---~~g-~l~~~~gg~~~~~~~~~~ll~~~g~~~~~~g~~g~ 166 (287)
T 3pef_A 97 VDPAT-----SQRIGVAVVA-KGGRFLEAPVSGSKKPA---EDG-TLIILAAGDRNLYDEAMPGFEKMGKKIIHLGDVGK 166 (287)
T ss_dssp CCHHH-----HHHHHHHHHH-TTCEEEECCEECCHHHH---HHT-CEEEEEEECHHHHHHHHHHHHHHEEEEEECSSTTH
T ss_pred CCHHH-----HHHHHHHHHH-hCCEEEECCCcCCHHHH---hcC-CEEEEEeCCHHHHHHHHHHHHHhCCCeEEeCCCCH
Confidence 44331 1222222322 12110001133344333 122 22234566778889999999988888888777766
Q ss_pred HHHHHHHHHHH
Q 019978 280 HEVMGGLKNVY 290 (333)
Q Consensus 280 ve~~~alkNv~ 290 (333)
.++.+...|.+
T Consensus 167 ~~~~Kl~~N~~ 177 (287)
T 3pef_A 167 GAEMKLVVNMV 177 (287)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 78888888874
No 37
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.63 E-value=1.6e-15 Score=142.31 Aligned_cols=173 Identities=16% Similarity=0.155 Sum_probs=119.6
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
.||||+|||+|.||+++|..|++. | ++|++|+|++++++++..
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~~-G-----~~V~~~d~~~~~~~~~~~------------------------------- 44 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLKA-G-----YLLNVFDLVQSAVDGLVA------------------------------- 44 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHT-T-----CEEEEECSSHHHHHHHHH-------------------------------
T ss_pred CCCEEEEEeecHHHHHHHHHHHhC-C-----CeEEEEcCCHHHHHHHHH-------------------------------
Confidence 468999999999999999999999 8 999999999876543210
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecC-chhHHHHHH---HHHhhhhccCCCCEEEEee
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLP-STETKEVFE---EISRYWKERITVPVIISLA 197 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVp-s~~~~~vl~---~i~~~l~~~~~~~~Ivs~~ 197 (333)
..+..+++++++++++|+||+||| +..+++++. ++.+.+.+ +++||+++
T Consensus 45 ------------------------~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~~~~~l~~---~~~vi~~s 97 (302)
T 2h78_A 45 ------------------------AGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAP---GTLVLECS 97 (302)
T ss_dssp ------------------------TTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSCGGGSSCS---SCEEEECS
T ss_pred ------------------------CCCeEcCCHHHHHhCCCeEEEECCCHHHHHHHHcCchhHHhcCCC---CcEEEECC
Confidence 024566788888999999999998 557899998 88887776 67887765
Q ss_pred ecCcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhccC-ceeEEEeCChhhHHHHHHHhCCCCeEEEecCC
Q 019978 198 KGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKE-YANARICGAEKWRKPLAKFLRRPHFTVWDNGD 276 (333)
Q Consensus 198 kGi~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~~~-~~~~~~~~~~~~~~~l~~ll~~~~~~v~~s~D 276 (333)
.+.... .+.+.+.+.... ..++..|.......... ....+.+++++..+.++.+|+..+.+++...+
T Consensus 98 t~~~~~----------~~~l~~~~~~~g--~~~~~~pv~~~~~~~~~g~l~~~~~g~~~~~~~~~~ll~~~g~~~~~~~~ 165 (302)
T 2h78_A 98 TIAPTS----------ARKIHAAARERG--LAMLDAPVSGGTAGAAAGTLTFMVGGDAEALEKARPLFEAMGRNIFHAGP 165 (302)
T ss_dssp CCCHHH----------HHHHHHHHHHTT--CCEEECCEESCHHHHHHTCEEEEEESCHHHHHHHHHHHHHHEEEEEEEES
T ss_pred CCCHHH----------HHHHHHHHHHcC--CEEEEEEccCChhhHhcCCceEEeCCCHHHHHHHHHHHHHhCCCeEEcCC
Confidence 433221 122333332111 11333455543322211 12224466778889999999988888887777
Q ss_pred hhHHHHHHHHHHHH
Q 019978 277 LVTHEVMGGLKNVY 290 (333)
Q Consensus 277 i~gve~~~alkNv~ 290 (333)
....+|.+...|.+
T Consensus 166 ~~~~~~~Kl~~n~~ 179 (302)
T 2h78_A 166 DGAGQVAKVCNNQL 179 (302)
T ss_dssp TTHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHH
Confidence 77778888888874
No 38
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.62 E-value=2.2e-15 Score=138.10 Aligned_cols=194 Identities=13% Similarity=0.119 Sum_probs=123.3
Q ss_pred CCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcc--hhhhhhhhHHHHHhhhhhHHHHhhhcccccchhh
Q 019978 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS--VDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (333)
Q Consensus 41 ~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~--~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~ 118 (333)
-..|||+|||+|+||+++|..|+++ | ++|++|+|++++ .+....+ +. +. ....+.
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~-G-----~~V~~~~r~~~~~~~~~~~~~-----~~-----------~~-~~~~~~ 73 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADL-G-----HEVTIGTRDPKATLARAEPDA-----MG-----------AP-PFSQWL 73 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHHTCC-----------------------C-CHHHHG
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHC-C-----CEEEEEeCChhhhhhhhhhhh-----hc-----------ch-hhhHHH
Confidence 3458999999999999999999999 8 999999999875 2211000 00 00 000000
Q ss_pred hhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHH-HhhhhccCCCCEEEEee
Q 019978 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEI-SRYWKERITVPVIISLA 197 (333)
Q Consensus 119 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i-~~~l~~~~~~~~Ivs~~ 197 (333)
+ .+ ... ..++++++++++|+||++||++...+++.++ .+.+ + +++||+++
T Consensus 74 ----~-~~-------------------~~~-~~~~~~e~~~~aDvVilavp~~~~~~~~~~i~~~~l-~---g~ivi~~s 124 (245)
T 3dtt_A 74 ----P-EH-------------------PHV-HLAAFADVAAGAELVVNATEGASSIAALTAAGAENL-A---GKILVDIA 124 (245)
T ss_dssp ----G-GS-------------------TTC-EEEEHHHHHHHCSEEEECSCGGGHHHHHHHHCHHHH-T---TSEEEECC
T ss_pred ----h-hc-------------------Cce-eccCHHHHHhcCCEEEEccCcHHHHHHHHHhhhhhc-C---CCEEEECC
Confidence 0 00 012 3456778889999999999999999999998 7777 4 68999999
Q ss_pred ecCccc-----ccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhccC------ceeEEEeC-ChhhHHHHHHHhC
Q 019978 198 KGVEAE-----LEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKE------YANARICG-AEKWRKPLAKFLR 265 (333)
Q Consensus 198 kGi~~~-----~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~~~------~~~~~~~~-~~~~~~~l~~ll~ 265 (333)
+|+... +....+...+++.+++.++. . -.+...|+....+..+. +..+++++ +++..+.++.+|+
T Consensus 125 ~~~~~~~G~~~t~~~~~~~~~~~~l~~~l~~--~-~vv~~~~~~~a~v~~~~~~a~~g~~~~~v~g~d~~~~~~v~~ll~ 201 (245)
T 3dtt_A 125 NPLDFSHGMPPTLNPVNTDSLGEQIQRTFPE--A-KVVKTLNTMNASLMVDPGRAAGGDHSVFVSGNDAAAKAEVATLLK 201 (245)
T ss_dssp CCEECTTCSSCEESSCSSCCHHHHHHHHSTT--S-EEEECSTTSCHHHHHCGGGTGGGCCCEEEECSCHHHHHHHHHHHH
T ss_pred CCCCCcCCccccccCCCCccHHHHHHHHCCC--C-eEEEeecccCHHHhcCccccCCCCeeEEEECCCHHHHHHHHHHHH
Confidence 876311 00011345778889888863 2 23444555544443321 22234444 5688999999999
Q ss_pred CCCeE-EEecCChhHHHHHHHHHHH
Q 019978 266 RPHFT-VWDNGDLVTHEVMGGLKNV 289 (333)
Q Consensus 266 ~~~~~-v~~s~Di~gve~~~alkNv 289 (333)
..+++ +....++-.....+.+-|.
T Consensus 202 ~~g~~~~~~~G~~g~a~~~k~~~~~ 226 (245)
T 3dtt_A 202 SLGHQDVIDLGDITTARGAEMLLPV 226 (245)
T ss_dssp HTTCCCEEEEESGGGHHHHHTTHHH
T ss_pred HcCCCceeccCcHHHHHHhhhhHHH
Confidence 99985 4555565444544444443
No 39
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.61 E-value=1.4e-14 Score=133.44 Aligned_cols=212 Identities=13% Similarity=0.061 Sum_probs=135.6
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCee-EEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~-V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
.|||+|||+|.||++++..|++. | ++ |.+|+|++++++++.. .
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~-g-----~~~v~~~~~~~~~~~~~~~---------~--------------------- 53 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRK-G-----FRIVQVYSRTEESARELAQ---------K--------------------- 53 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHH-T-----CCEEEEECSSHHHHHHHHH---------H---------------------
T ss_pred CCeEEEEcCCHHHHHHHHHHHHC-C-----CeEEEEEeCCHHHHHHHHH---------H---------------------
Confidence 37999999999999999999999 8 88 8999999876543210 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCc
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~ 201 (333)
..+.++++++++++++|+||+++|++.+.++++++.+.+++ +++++++++|++
T Consensus 54 ------------------------~g~~~~~~~~~~~~~~Dvvi~av~~~~~~~v~~~l~~~~~~---~~ivv~~s~~~~ 106 (266)
T 3d1l_A 54 ------------------------VEAEYTTDLAEVNPYAKLYIVSLKDSAFAELLQGIVEGKRE---EALMVHTAGSIP 106 (266)
T ss_dssp ------------------------TTCEEESCGGGSCSCCSEEEECCCHHHHHHHHHHHHTTCCT---TCEEEECCTTSC
T ss_pred ------------------------cCCceeCCHHHHhcCCCEEEEecCHHHHHHHHHHHHhhcCC---CcEEEECCCCCc
Confidence 02345567777788999999999999999999999888866 789999999988
Q ss_pred ccccCCccCCCHHHHHHhHhCCCC--CcEEEEcCCCchHHHhccCceeEEEeCChhhHHHHHHHhCCCCeEEEecCChh-
Q 019978 202 AELEAVPRIITPTQMINRATGVPI--ENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLV- 278 (333)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~--~~~~vl~GP~~a~ev~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~s~Di~- 278 (333)
.+. +.+.++... ++...++||... ...+ ...++.+.+++..+.++++|+..+.+++..++..
T Consensus 107 ~~~------------l~~~~~~~~~~~~~~~~~g~~~~--~~~~-~~~~v~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~ 171 (266)
T 3d1l_A 107 MNV------------WEGHVPHYGVFYPMQTFSKQREV--DFKE-IPFFIEASSTEDAAFLKAIASTLSNRVYDADSEQR 171 (266)
T ss_dssp GGG------------STTTCSSEEEEEECCCC---CCC--CCTT-CCEEEEESSHHHHHHHHHHHHTTCSCEEECCHHHH
T ss_pred hHH------------HHHHHHhccCcCCceecCCCchh--hcCC-CeEEEecCCHHHHHHHHHHHHhcCCcEEEeCHHHH
Confidence 652 233332100 011112232221 1222 2222235667788999999999998887766553
Q ss_pred --HHHHHHHHHHHH----HHHHHHHhccCCCCCccHHHHHHHHHHHHHHH---HHCCCCCCCCC
Q 019978 279 --THEVMGGLKNVY----AIGAGMVAALTNESATSKSVYFAHCTSEMVVM---HGMGRSWQKGD 333 (333)
Q Consensus 279 --gve~~~alkNv~----Ai~~Gi~~gl~~~~~n~~~~l~~~~~~E~~~l---~~~G~~~~~~~ 333 (333)
...+.+..-|.. +++-.++...+. .......++...+.-+..+ .++-|+..+||
T Consensus 172 ~~~~~~~~l~~~~~~~~~~~~eal~~~~Gl-~~~~~~~l~~~~~~~~~~~~~~~~~~GP~~r~d 234 (266)
T 3d1l_A 172 KSLHLAAVFTCNFTNHMYALAAELLKKYNL-PFDVMLPLIDETARKVHELEPKTAQTGPAIRYD 234 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CGGGGHHHHHHHHHHHHHSCHHHHCCSTTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHhcChhhhCCCCCccCC
Confidence 335555555543 223333333333 2223345555555544443 46777877777
No 40
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.61 E-value=7e-15 Score=138.82 Aligned_cols=170 Identities=14% Similarity=0.098 Sum_probs=115.0
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
+|||+|||+|.||+++|..|++. | ++|++|+|++++++++..
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~-g-----~~V~~~~~~~~~~~~~~~-------------------------------- 71 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKM-G-----HTVTVWNRTAEKCDLFIQ-------------------------------- 71 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSGGGGHHHHH--------------------------------
T ss_pred CCeEEEEcccHHHHHHHHHHHhC-C-----CEEEEEeCCHHHHHHHHH--------------------------------
Confidence 58999999999999999999998 8 899999999876543210
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecC-chhHHHHHHHHH---hhhhccCCCCEEEEeee
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLP-STETKEVFEEIS---RYWKERITVPVIISLAK 198 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVp-s~~~~~vl~~i~---~~l~~~~~~~~Ivs~~k 198 (333)
..+...++++++++++|+||+||| +..+++++.++. +.+.+ +++||++++
T Consensus 72 -----------------------~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~~~~~l~~---~~~vv~~s~ 125 (316)
T 2uyy_A 72 -----------------------EGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRP---GKCYVDMST 125 (316)
T ss_dssp -----------------------TTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCT---TCEEEECSC
T ss_pred -----------------------cCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCchhHhhcCCC---CCEEEECCC
Confidence 023345677788889999999999 788999988754 55555 678888876
Q ss_pred cCcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchH--HHhccCceeEEEeCChhhHHHHHHHhCCCCeEEEecCC
Q 019978 199 GVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIAS--EIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGD 276 (333)
Q Consensus 199 Gi~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~--ev~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~s~D 276 (333)
+.... .+.+.+.++. ....++.+|.+.. ....+... .+++++++..+.++++|+..+++++..+|
T Consensus 126 ~~~~~----------~~~l~~~~~~--~~~~~v~~p~~g~~~~~~~g~~~-~~~~g~~~~~~~v~~ll~~~g~~~~~~~~ 192 (316)
T 2uyy_A 126 VDADT----------VTELAQVIVS--RGGRFLEAPVSGNQQLSNDGMLV-ILAAGDRGLYEDCSSCFQAMGKTSFFLGE 192 (316)
T ss_dssp CCHHH----------HHHHHHHHHH--TTCEEEECCEESCHHHHHHTCEE-EEEEECHHHHHHTHHHHHHHEEEEEECSS
T ss_pred CCHHH----------HHHHHHHHHH--cCCEEEEcCccCChhHHhhCCEE-EEeCCCHHHHHHHHHHHHHhcCCEEEeCC
Confidence 43221 1223343321 1123455565432 22333222 23455667888999999998999988878
Q ss_pred hhHHHHHHHHHHH
Q 019978 277 LVTHEVMGGLKNV 289 (333)
Q Consensus 277 i~gve~~~alkNv 289 (333)
+-...|.+...|.
T Consensus 193 ~~~~~~~K~~~n~ 205 (316)
T 2uyy_A 193 VGNAAKMMLIVNM 205 (316)
T ss_dssp TTHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 6555565555554
No 41
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.61 E-value=5.6e-15 Score=139.02 Aligned_cols=170 Identities=11% Similarity=0.090 Sum_probs=118.3
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
+|||+|||+|.||+.+|..|+++ | |+|++|+|++++++++..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~-G-----~~V~~~dr~~~~~~~~~~-------------------------------- 56 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW-P-----GGVTVYDIRIEAMTPLAE-------------------------------- 56 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS-T-----TCEEEECSSTTTSHHHHH--------------------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHHC-C-----CeEEEEeCCHHHHHHHHH--------------------------------
Confidence 47999999999999999999999 8 999999999987653210
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc-hhHHHHHHHHHhhhhccCCCCEEEEeeecCc
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-TETKEVFEEISRYWKERITVPVIISLAKGVE 201 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps-~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~ 201 (333)
..+..+++++++++ +|+||++||. ..++++++++.+.+++ +++||.++.. .
T Consensus 57 -----------------------~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l~~~l~~---g~ivv~~st~-~ 108 (296)
T 3qha_A 57 -----------------------AGATLADSVADVAA-ADLIHITVLDDAQVREVVGELAGHAKP---GTVIAIHSTI-S 108 (296)
T ss_dssp -----------------------TTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHHHTTCCT---TCEEEECSCC-C
T ss_pred -----------------------CCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHHHHhcCC---CCEEEEeCCC-C
Confidence 03456688989888 9999999995 5889999999988876 6778776543 2
Q ss_pred ccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHH--hccCceeEEEeCChhhHHHHHHHhCCCCeEEEecCChhH
Q 019978 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEI--YNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVT 279 (333)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev--~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~s~Di~g 279 (333)
+.+ .+.+.+.+.. ....++..|.+.... ..+ ....+++++++..+.++.+|+..+.+++...+.-.
T Consensus 109 ~~~---------~~~~~~~~~~--~g~~~~~~pv~g~~~~a~~g-~l~~~~gg~~~~~~~~~~ll~~~g~~~~~~g~~g~ 176 (296)
T 3qha_A 109 DTT---------AVELARDLKA--RDIHIVDAPVSGGAAAAARG-ELATMVGADREVYERIKPAFKHWAAVVIHAGEPGA 176 (296)
T ss_dssp HHH---------HHHHHHHHGG--GTCEEEECCEESCHHHHHHT-CEEEEEECCHHHHHHHHHHHHHHEEEEEEEESTTH
T ss_pred HHH---------HHHHHHHHHH--cCCEEEeCCCcCCHHHHhcC-CccEEecCCHHHHHHHHHHHHHHcCCeEEcCChhH
Confidence 221 1223333311 112233344332211 123 22234567778889999999988888877777666
Q ss_pred HHHHHHHHHHH
Q 019978 280 HEVMGGLKNVY 290 (333)
Q Consensus 280 ve~~~alkNv~ 290 (333)
.++.+...|.+
T Consensus 177 a~~~Kl~~N~~ 187 (296)
T 3qha_A 177 GTRMKLARNML 187 (296)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 67888877763
No 42
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.61 E-value=4.7e-15 Score=148.27 Aligned_cols=220 Identities=13% Similarity=0.110 Sum_probs=142.9
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
.+|||+|||+|+||+.+|..|++. | .+++|++|+|++++++.++. + ..+.+.+++.
T Consensus 4 ~~mkI~VIG~G~mG~~lA~~La~~-g---~G~~V~~~d~~~~~~~~l~~---------g--------~~~i~e~~l~--- 59 (467)
T 2q3e_A 4 EIKKICCIGAGYVGGPTCSVIAHM-C---PEIRVTVVDVNESRINAWNS---------P--------TLPIYEPGLK--- 59 (467)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHH-C---TTSEEEEECSCHHHHHHHTS---------S--------SCSSCCTTHH---
T ss_pred CccEEEEECCCHHHHHHHHHHHhc-C---CCCEEEEEECCHHHHHHHhC---------C--------CCCcCCCCHH---
Confidence 468999999999999999999987 4 12899999999887665432 1 1122323211
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh---------------HHHHHHHHHhhhhc
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE---------------TKEVFEEISRYWKE 186 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~---------------~~~vl~~i~~~l~~ 186 (333)
|++..+. ..++.++++++++++++|+||+|||... +.++++++.+++++
T Consensus 60 --------~~~~~~~--------~~~~~~t~~~~e~~~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~ 123 (467)
T 2q3e_A 60 --------EVVESCR--------GKNLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNG 123 (467)
T ss_dssp --------HHHHHHB--------TTTEEEESCHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCS
T ss_pred --------HHHHHhh--------cCCEEEECCHHHHHhcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCC
Confidence 1111100 0157788999888999999999998643 67888999988876
Q ss_pred cCCCCEEEEeeecCcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhc----cCceeEEEeC-----ChhhH
Q 019978 187 RITVPVIISLAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYN----KEYANARICG-----AEKWR 257 (333)
Q Consensus 187 ~~~~~~Ivs~~kGi~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~----~~~~~~~~~~-----~~~~~ 257 (333)
+++||..+ .+.+++ .+.+.+.+.+. +.....+.+.++|.++.+... ..+..+++++ +++..
T Consensus 124 ---g~iVV~~S-Tv~~g~-----~~~l~~~l~~~-~~~~~d~~V~~~Pe~~~~G~~~~d~~~~~rivvGg~~~~~~~~~~ 193 (467)
T 2q3e_A 124 ---YKIVTEKS-TVPVRA-----AESIRRIFDAN-TKPNLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAV 193 (467)
T ss_dssp ---EEEEEECS-CCCTTH-----HHHHHHHHHHT-CCTTCEEEEEECCCCCCTTSHHHHHHSCSCEEEECCSSHHHHHHH
T ss_pred ---CCEEEECC-cCCchH-----HHHHHHHHHHh-CCCCCCeEEEeCHHHhhcccchhhccCCCEEEECCCCCCCCHHHH
Confidence 56665543 344431 22234444442 111234567889998764332 1233344444 45678
Q ss_pred HHHHHHhCCC-CeEEEecCChhHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHH-HHCCCCC
Q 019978 258 KPLAKFLRRP-HFTVWDNGDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVVM-HGMGRSW 329 (333)
Q Consensus 258 ~~l~~ll~~~-~~~v~~s~Di~gve~~~alkNv~Ai~~Gi~~gl~~~~~n~~~~l~~~~~~E~~~l-~~~G~~~ 329 (333)
+.++++|+.. +..+....|+...||.+.+-|.+ .++....++|+..+ +++|.+.
T Consensus 194 ~~~~~l~~~~~g~~~~~~~~~~~ae~~Kl~~N~~------------------~a~~ia~~nE~~~l~~~~Gid~ 249 (467)
T 2q3e_A 194 QALCAVYEHWVPREKILTTNTWSSELSKLAANAF------------------LAQRISSINSISALCEATGADV 249 (467)
T ss_dssp HHHHHHHTTTSCGGGEEEECHHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHTCCH
T ss_pred HHHHHHHHHhccCCeEEecCHHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHhCcCH
Confidence 9999999987 55556667888889999988873 34455666777776 6666654
No 43
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.61 E-value=7.1e-15 Score=139.14 Aligned_cols=174 Identities=16% Similarity=0.147 Sum_probs=120.2
Q ss_pred CCCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhh
Q 019978 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (333)
Q Consensus 40 ~~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (333)
...+|||+|||+|.||+++|..|++. | ++|++|+|++++++++..
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~-G-----~~V~~~dr~~~~~~~l~~----------------------------- 62 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKN-G-----FKVTVWNRTLSKCDELVE----------------------------- 62 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSGGGGHHHHH-----------------------------
T ss_pred cccCCEEEEECccHHHHHHHHHHHHC-C-----CeEEEEeCCHHHHHHHHH-----------------------------
Confidence 34678999999999999999999999 8 999999999876643210
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc-hhHHHHH---HHHHhhhhccCCCCEEEE
Q 019978 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-TETKEVF---EEISRYWKERITVPVIIS 195 (333)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps-~~~~~vl---~~i~~~l~~~~~~~~Ivs 195 (333)
..+..+++++++++++|+||++||. ..+++++ +++.+.+.+ +++||.
T Consensus 63 --------------------------~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~---g~~vv~ 113 (310)
T 3doj_A 63 --------------------------HGASVCESPAEVIKKCKYTIAMLSDPCAALSVVFDKGGVLEQICE---GKGYID 113 (310)
T ss_dssp --------------------------TTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCT---TCEEEE
T ss_pred --------------------------CCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHhCchhhhhccCC---CCEEEE
Confidence 0245667888889999999999997 4788888 788877776 677877
Q ss_pred eeecCcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHH--HhccCceeEEEeCChhhHHHHHHHhCCCCeEEEe
Q 019978 196 LAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASE--IYNKEYANARICGAEKWRKPLAKFLRRPHFTVWD 273 (333)
Q Consensus 196 ~~kGi~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~e--v~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~ 273 (333)
++ ++.+.+ .+.+.+.+.+ .|. .++..|..... ...+. ..++++++++..+.++.+|+..+.++..
T Consensus 114 ~s-t~~~~~-----~~~~~~~~~~-~g~-----~~v~~pv~g~~~~a~~g~-l~i~~gg~~~~~~~~~~ll~~~g~~~~~ 180 (310)
T 3doj_A 114 MS-TVDAET-----SLKINEAITG-KGG-----RFVEGPVSGSKKPAEDGQ-LIILAAGDKALFEESIPAFDVLGKRSFY 180 (310)
T ss_dssp CS-CCCHHH-----HHHHHHHHHH-TTC-----EEEECCEECCHHHHHHTC-EEEEEEECHHHHHHHHHHHHHHEEEEEE
T ss_pred CC-CCCHHH-----HHHHHHHHHH-cCC-----EEEeCCCCCChhHHhcCC-eEEEEcCCHHHHHHHHHHHHHhCCCEEE
Confidence 65 333321 1222232322 121 12223332211 12232 2234566778889999999988888888
Q ss_pred cCChhHHHHHHHHHHHH
Q 019978 274 NGDLVTHEVMGGLKNVY 290 (333)
Q Consensus 274 s~Di~gve~~~alkNv~ 290 (333)
..+.-..++.+...|.+
T Consensus 181 ~g~~g~a~~~Kl~~N~~ 197 (310)
T 3doj_A 181 LGQVGNGAKMKLIVNMI 197 (310)
T ss_dssp CSSTTHHHHHHHHHHHH
T ss_pred eCCcCHHHHHHHHHHHH
Confidence 88876678888888874
No 44
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=99.61 E-value=1.4e-14 Score=143.64 Aligned_cols=188 Identities=16% Similarity=0.158 Sum_probs=126.4
Q ss_pred CCCCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhh
Q 019978 39 AEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (333)
Q Consensus 39 ~~~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~ 118 (333)
.+..+|||+|||+|+||+.+|..|++ | ++|++|+++++++++++. + +.+.+.+++.
T Consensus 32 r~~~~mkIaVIGlG~mG~~lA~~La~--G-----~~V~~~D~~~~~v~~l~~---------g--------~~~i~e~~l~ 87 (432)
T 3pid_A 32 RGSEFMKITISGTGYVGLSNGVLIAQ--N-----HEVVALDIVQAKVDMLNQ---------K--------ISPIVDKEIQ 87 (432)
T ss_dssp ---CCCEEEEECCSHHHHHHHHHHHT--T-----SEEEEECSCHHHHHHHHT---------T--------CCSSCCHHHH
T ss_pred cccCCCEEEEECcCHHHHHHHHHHHc--C-----CeEEEEecCHHHhhHHhc---------c--------CCccccccHH
Confidence 34567999999999999999999985 6 999999999988765432 1 1234444332
Q ss_pred hhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-----------hHHHHHHHHHhhhhcc
Q 019978 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-----------ETKEVFEEISRYWKER 187 (333)
Q Consensus 119 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-----------~~~~vl~~i~~~l~~~ 187 (333)
|++.++ ..++++++|+++++++||+||+|||+. +++++++.+.+ +++
T Consensus 88 -----------~ll~~~---------~~~l~~ttd~~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~- 145 (432)
T 3pid_A 88 -----------EYLAEK---------PLNFRATTDKHDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INP- 145 (432)
T ss_dssp -----------HHHHHS---------CCCEEEESCHHHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCT-
T ss_pred -----------HHHhhc---------cCCeEEEcCHHHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCC-
Confidence 111110 025889999999999999999999986 68999999999 876
Q ss_pred CCCCEEEEeeecCcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhc----cCceeEEEeCChhhHHHHHHH
Q 019978 188 ITVPVIISLAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYN----KEYANARICGAEKWRKPLAKF 263 (333)
Q Consensus 188 ~~~~~Ivs~~kGi~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~----~~~~~~~~~~~~~~~~~l~~l 263 (333)
+++||. .+++++++ .+.+.+.+.. . .+.+.|.+..+... ..|..++++++++.++++..+
T Consensus 146 --g~iVV~-~STv~pgt---------t~~l~~~l~~--~--~v~~sPe~~~~G~A~~~~l~p~rIvvG~~~~~~~~~~~l 209 (432)
T 3pid_A 146 --NAVMII-KSTIPVGF---------TRDIKERLGI--D--NVIFSPEFLREGRALYDNLHPSRIVIGERSARAERFADL 209 (432)
T ss_dssp --TSEEEE-CSCCCTTH---------HHHHHHHHTC--C--CEEECCCCCCTTSHHHHHHSCSCEEESSCSHHHHHHHHH
T ss_pred --CcEEEE-eCCCChHH---------HHHHHHHHhh--c--cEeecCccCCcchhhhcccCCceEEecCCHHHHHHHHHH
Confidence 676664 44666653 2334444542 1 24557777654322 123345666666777888888
Q ss_pred hCCC----CeEEEecCChhHHHHHHHHHHH
Q 019978 264 LRRP----HFTVWDNGDLVTHEVMGGLKNV 289 (333)
Q Consensus 264 l~~~----~~~v~~s~Di~gve~~~alkNv 289 (333)
|... +.++.. .|+...|+.|.+-|.
T Consensus 210 l~~~~~~~~~~v~~-~~~~~AE~~Kl~~N~ 238 (432)
T 3pid_A 210 LKEGAIKQDIPTLF-TDSTEAEAIKLFANT 238 (432)
T ss_dssp HHHHCSSSSCCEEE-CCHHHHHHHHHHHHH
T ss_pred HHhhhccCCCeEEe-cCccHHHHHHHHHHH
Confidence 8641 234443 578888999988886
No 45
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.60 E-value=3.8e-15 Score=149.67 Aligned_cols=156 Identities=15% Similarity=0.136 Sum_probs=107.9
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
.++|+|||+|+||++||..|+++ | ++|++|+|++++++++..+ .++
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~-G-----~~V~v~~r~~~~~~~l~~~----------------------~~~------ 60 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESR-G-----YTVSIFNRSREKTEEVIAE----------------------NPG------ 60 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTT-T-----CCEEEECSSHHHHHHHHHH----------------------STT------
T ss_pred CCeEEEEccHHHHHHHHHHHHhC-C-----CeEEEEeCCHHHHHHHHhh----------------------CCC------
Confidence 37899999999999999999999 8 9999999998766543210 000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcC---CCEEEEecCc-hhHHHHHHHHHhhhhccCCCCEEEEeee
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD---ADIVINGLPS-TETKEVFEEISRYWKERITVPVIISLAK 198 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~---aDlIIlaVps-~~~~~vl~~i~~~l~~~~~~~~Ivs~~k 198 (333)
..+..++++++++.+ +|+||++||+ +.++++++++.+++++ +++||++++
T Consensus 61 -----------------------~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~vl~~l~~~l~~---g~iIId~s~ 114 (480)
T 2zyd_A 61 -----------------------KKLVPYYTVKEFVESLETPRRILLMVKAGAGTDAAIDSLKPYLDK---GDIIIDGGN 114 (480)
T ss_dssp -----------------------SCEEECSSHHHHHHTBCSSCEEEECSCSSSHHHHHHHHHGGGCCT---TCEEEECSC
T ss_pred -----------------------CCeEEeCCHHHHHhCCCCCCEEEEECCCHHHHHHHHHHHHhhcCC---CCEEEECCC
Confidence 035667888888776 9999999999 5899999999998876 789999999
Q ss_pred cCcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhccCceeEEEeCChhhHHHHHHHhCCCCeE
Q 019978 199 GVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFT 270 (333)
Q Consensus 199 Gi~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~ 270 (333)
|....+ ....+.+.+ .+.......+..||..+ ..+ + .++++++++..+.++.+|+..+.+
T Consensus 115 g~~~~t------~~l~~~l~~-~g~~~v~~pv~gg~~~a---~~g-~-~i~~gg~~~~~~~v~~ll~~~g~~ 174 (480)
T 2zyd_A 115 TFFQDT------IRRNRELSA-EGFNFIGTGVSGGEEGA---LKG-P-SIMPGGQKEAYELVAPILTKIAAV 174 (480)
T ss_dssp CCHHHH------HHHHHHHHH-TTCEEEEEEEESHHHHH---HHC-C-EEEEESCHHHHHHHHHHHHHHSCB
T ss_pred CCHHHH------HHHHHHHHH-CCCCeeCCccccCHhHH---hcC-C-eEEecCCHHHHHHHHHHHHHHhcc
Confidence 987542 112333332 12110011222333332 233 3 345567777888999999865554
No 46
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.60 E-value=8.8e-15 Score=139.22 Aligned_cols=173 Identities=16% Similarity=0.144 Sum_probs=117.8
Q ss_pred CCCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhh
Q 019978 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (333)
Q Consensus 40 ~~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (333)
...+|||+|||+|.||+.+|..|++. | ++|++|+|++++++++..
T Consensus 28 ~~~~~~I~iIG~G~mG~~~a~~l~~~-G-----~~V~~~dr~~~~~~~l~~----------------------------- 72 (320)
T 4dll_A 28 DPYARKITFLGTGSMGLPMARRLCEA-G-----YALQVWNRTPARAASLAA----------------------------- 72 (320)
T ss_dssp -CCCSEEEEECCTTTHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHT-----------------------------
T ss_pred ccCCCEEEEECccHHHHHHHHHHHhC-C-----CeEEEEcCCHHHHHHHHH-----------------------------
Confidence 34568999999999999999999999 8 999999999876543110
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc-hhHHHHHH--HHHhhhhccCCCCEEEEe
Q 019978 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-TETKEVFE--EISRYWKERITVPVIISL 196 (333)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps-~~~~~vl~--~i~~~l~~~~~~~~Ivs~ 196 (333)
..+..+++++++++++|+||++||. ..+++++. .+.+.+.+ +++||.+
T Consensus 73 --------------------------~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~~~~~~l~~---~~~vi~~ 123 (320)
T 4dll_A 73 --------------------------LGATIHEQARAAARDADIVVSMLENGAVVQDVLFAQGVAAAMKP---GSLFLDM 123 (320)
T ss_dssp --------------------------TTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTTCHHHHCCT---TCEEEEC
T ss_pred --------------------------CCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcchhHHhhCCC---CCEEEec
Confidence 0345678899999999999999996 57888887 77777776 6788877
Q ss_pred eecCcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHh-ccCceeEEEeCChhhHHHHHHHhCCCCeEEEecC
Q 019978 197 AKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIY-NKEYANARICGAEKWRKPLAKFLRRPHFTVWDNG 275 (333)
Q Consensus 197 ~kGi~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~-~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~s~ 275 (333)
+.+-... .+.+.+.+.+ .+ ..++..|.+..... ......++++++++..+.++.+|+.. .++.+..
T Consensus 124 st~~~~~------~~~~~~~~~~-~g-----~~~~~~pv~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~-~~~~~~g 190 (320)
T 4dll_A 124 ASITPRE------ARDHAARLGA-LG-----IAHLDTPVSGGTVGAEQGTLVIMAGGKPADFERSLPLLKVF-GRATHVG 190 (320)
T ss_dssp SCCCHHH------HHHHHHHHHH-TT-----CEEEECCEECHHHHHHHTCEEEEEESCHHHHHHHHHHHHHH-EEEEEEE
T ss_pred CCCCHHH------HHHHHHHHHH-cC-----CEEEeCCCcCCHhHHhcCCeeEEeCCCHHHHHHHHHHHHhc-CCEEEeC
Confidence 6443221 1112222222 12 23444565543322 12222234567777888899998877 7777777
Q ss_pred ChhHHHHHHHHHHH
Q 019978 276 DLVTHEVMGGLKNV 289 (333)
Q Consensus 276 Di~gve~~~alkNv 289 (333)
+.-..++.+..-|.
T Consensus 191 ~~g~a~~~Kl~~N~ 204 (320)
T 4dll_A 191 PHGSGQLTKLANQM 204 (320)
T ss_dssp STTHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHH
Confidence 76666777777776
No 47
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.59 E-value=9.9e-15 Score=136.40 Aligned_cols=171 Identities=16% Similarity=0.189 Sum_probs=117.0
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
.+|||+|||+|.||++++..|++. | ++|++|+|++++++++..
T Consensus 3 ~~~~i~iiG~G~~G~~~a~~l~~~-g-----~~V~~~~~~~~~~~~~~~------------------------------- 45 (301)
T 3cky_A 3 KSIKIGFIGLGAMGKPMAINLLKE-G-----VTVYAFDLMEANVAAVVA------------------------------- 45 (301)
T ss_dssp -CCEEEEECCCTTHHHHHHHHHHT-T-----CEEEEECSSHHHHHHHHT-------------------------------
T ss_pred CCCEEEEECccHHHHHHHHHHHHC-C-----CeEEEEeCCHHHHHHHHH-------------------------------
Confidence 358999999999999999999998 8 899999999865432110
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecC-chhHHHHHH---HHHhhhhccCCCCEEEEee
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLP-STETKEVFE---EISRYWKERITVPVIISLA 197 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVp-s~~~~~vl~---~i~~~l~~~~~~~~Ivs~~ 197 (333)
..+...+++++++.++|+||+++| +..++.++. ++.+.+++ +++||+++
T Consensus 46 ------------------------~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~---~~~vv~~~ 98 (301)
T 3cky_A 46 ------------------------QGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGGVLSACKA---GTVIVDMS 98 (301)
T ss_dssp ------------------------TTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHSCT---TCEEEECC
T ss_pred ------------------------CCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcchHhhcCCC---CCEEEECC
Confidence 023445678888889999999997 456888885 78888876 78999998
Q ss_pred ecCcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHH--hccCceeEEEeCChhhHHHHHHHhCCCCeEEEecC
Q 019978 198 KGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEI--YNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNG 275 (333)
Q Consensus 198 kGi~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev--~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~s~ 275 (333)
+|..... +.+.+.++.. .+.++..|...... ..+..+ .+.+++++..+.++++|+..+++++...
T Consensus 99 ~~~~~~~----------~~l~~~~~~~--g~~~~~~p~~~~~~~a~~g~~~-~~~~g~~~~~~~v~~ll~~~g~~~~~~~ 165 (301)
T 3cky_A 99 SVSPSST----------LKMAKVAAEK--GIDYVDAPVSGGTKGAEAGTLT-IMVGASEAVFEKIQPVLSVIGKDIYHVG 165 (301)
T ss_dssp CCCHHHH----------HHHHHHHHHT--TCEEEECCEESHHHHHHHTCEE-EEEESCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred CCCHHHH----------HHHHHHHHHc--CCeEEEccCCCCHHHHHcCCeE-EEECCCHHHHHHHHHHHHHhcCCEEEeC
Confidence 8874221 2233333211 11223345443321 123222 2345567788999999999899888776
Q ss_pred ChhHHHHHHHHHHH
Q 019978 276 DLVTHEVMGGLKNV 289 (333)
Q Consensus 276 Di~gve~~~alkNv 289 (333)
+.-...|.+...|.
T Consensus 166 ~~g~~~~~Kl~~N~ 179 (301)
T 3cky_A 166 DTGAGDAVKIVNNL 179 (301)
T ss_dssp STTHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 66666777777775
No 48
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.59 E-value=5.6e-15 Score=148.40 Aligned_cols=157 Identities=15% Similarity=0.129 Sum_probs=109.5
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
|||+|||+|+||+++|..|+++ | ++|.+|+|++++++++.. + ..++
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~-G-----~~V~v~dr~~~~~~~l~~---------~------------~~~g------- 48 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH-G-----FVVCAFNRTVSKVDDFLA---------N------------EAKG------- 48 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSTHHHHHHHH---------T------------TTTT-------
T ss_pred CeEEEEChHHHHHHHHHHHHHC-C-----CeEEEEeCCHHHHHHHHh---------c------------cccC-------
Confidence 7999999999999999999999 8 999999999887654221 0 0000
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHh---cCCCEEEEecCch-hHHHHHHHHHhhhhccCCCCEEEEeeec
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAV---WDADIVINGLPST-ETKEVFEEISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~---~~aDlIIlaVps~-~~~~vl~~i~~~l~~~~~~~~Ivs~~kG 199 (333)
..+..++++++++ +++|+||++||+. .++++++++.+++++ +++||++++|
T Consensus 49 ----------------------~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~vl~~l~~~l~~---g~iII~~s~~ 103 (482)
T 2pgd_A 49 ----------------------TKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDNFIEKLVPLLDI---GDIIIDGGNS 103 (482)
T ss_dssp ----------------------SSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHHHHHHHHHHCCT---TCEEEECSCC
T ss_pred ----------------------CCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHHHHHHHHhhcCC---CCEEEECCCC
Confidence 0355667888876 4899999999995 899999999998876 6889999988
Q ss_pred CcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhccCceeEEEeCChhhHHHHHHHhCCCCeEE
Q 019978 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTV 271 (333)
Q Consensus 200 i~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v 271 (333)
....+ ....+.+.+ .+ +.++.+|....+...+..+.++.+++++..+.++.+|+..+.++
T Consensus 104 ~~~~~------~~l~~~l~~-~g-----~~~v~~pv~g~~~~a~~g~~i~~gg~~e~~~~v~~ll~~~g~~v 163 (482)
T 2pgd_A 104 EYRDT------MRRCRDLKD-KG-----ILFVGSGVSGGEDGARYGPSLMPGGNKEAWPHIKAIFQGIAAKV 163 (482)
T ss_dssp CHHHH------HHHHHHHHH-TT-----CEEEEEEEESHHHHHHHCCEEEEEECTTTHHHHHHHHHHHSCBC
T ss_pred CHHHH------HHHHHHHHH-cC-----CeEeCCCCCCChhhhccCCeEEeCCCHHHHHHHHHHHHHhhhhc
Confidence 77542 112222322 12 22445565543332222223355566778899999998877765
No 49
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.59 E-value=8.3e-15 Score=138.04 Aligned_cols=173 Identities=13% Similarity=0.057 Sum_probs=115.6
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
.+|||+|||+|.||+++|..|++. | ++|++|+|++++++++... +
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~-G-----~~V~~~dr~~~~~~~~~~~------------------------g----- 50 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRA-G-----LSTWGADLNPQACANLLAE------------------------G----- 50 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHHT------------------------T-----
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC-C-----CeEEEEECCHHHHHHHHHc------------------------C-----
Confidence 347999999999999999999999 8 9999999998765432110 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH---HHHHhhhhccCCCCEEEEee
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF---EEISRYWKERITVPVIISLA 197 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-~~~~vl---~~i~~~l~~~~~~~~Ivs~~ 197 (333)
...++++++++++++|+||++||+. .++.++ +++.+.+++ +++||.++
T Consensus 51 -------------------------~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~---g~ivv~~s 102 (303)
T 3g0o_A 51 -------------------------ACGAAASAREFAGVVDALVILVVNAAQVRQVLFGEDGVAHLMKP---GSAVMVSS 102 (303)
T ss_dssp -------------------------CSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--CCCGGGSCT---TCEEEECS
T ss_pred -------------------------CccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChhhHHhhCCC---CCEEEecC
Confidence 0112566778889999999999985 788887 778888776 67887766
Q ss_pred ecCcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHH--HhccCceeEEEeCChhhHHHHHHHhCCCCeEEEecC
Q 019978 198 KGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASE--IYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNG 275 (333)
Q Consensus 198 kGi~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~e--v~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~s~ 275 (333)
+. .+.+ .+.+.+.+.. ....++..|..... ...+ ...++++++++..+.++.+|+..+.++....
T Consensus 103 t~-~~~~---------~~~~~~~~~~--~g~~~~~~pv~g~~~~a~~g-~l~~~~gg~~~~~~~~~~ll~~~g~~~~~~~ 169 (303)
T 3g0o_A 103 TI-SSAD---------AQEIAAALTA--LNLNMLDAPVSGGAVKAAQG-EMTVMASGSEAAFTRLKPVLDAVASNVYRIS 169 (303)
T ss_dssp CC-CHHH---------HHHHHHHHHT--TTCEEEECCEESCHHHHHTT-CEEEEEECCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred CC-CHHH---------HHHHHHHHHH--cCCeEEeCCCCCChhhhhcC-CeEEEeCCCHHHHHHHHHHHHHHCCCEEECC
Confidence 43 2221 1223332211 11223334433221 1222 2223456777889999999998888877666
Q ss_pred C-hhHHHHHHHHHHHH
Q 019978 276 D-LVTHEVMGGLKNVY 290 (333)
Q Consensus 276 D-i~gve~~~alkNv~ 290 (333)
+ +-..++.+...|.+
T Consensus 170 ~~~g~a~~~Kl~~N~~ 185 (303)
T 3g0o_A 170 DTPGAGSTVKIIHQLL 185 (303)
T ss_dssp SSTTHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHH
Confidence 5 66678888887774
No 50
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.58 E-value=2.9e-14 Score=132.18 Aligned_cols=167 Identities=19% Similarity=0.230 Sum_probs=111.5
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
||||+|||+|.||++++..|++ | ++|++|+|++++++++... +
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~--g-----~~V~~~~~~~~~~~~~~~~------------------------g------ 43 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR--R-----FPTLVWNRTFEKALRHQEE------------------------F------ 43 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT--T-----SCEEEECSSTHHHHHHHHH------------------------H------
T ss_pred CCeEEEEcccHHHHHHHHHHhC--C-----CeEEEEeCCHHHHHHHHHC------------------------C------
Confidence 4799999999999999999986 5 8999999998765432110 0
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh-HHHHHHHHHhhhhccCCCCEEEEeeecCc
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-TKEVFEEISRYWKERITVPVIISLAKGVE 201 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~-~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~ 201 (333)
+...+ +++++.++|+||+|+|+.. ++++++++.+.+++ +++|++++++..
T Consensus 44 -------------------------~~~~~-~~~~~~~~D~vi~~v~~~~~~~~v~~~l~~~l~~---~~~vv~~s~~~~ 94 (289)
T 2cvz_A 44 -------------------------GSEAV-PLERVAEARVIFTCLPTTREVYEVAEALYPYLRE---GTYWVDATSGEP 94 (289)
T ss_dssp -------------------------CCEEC-CGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCCT---TEEEEECSCCCH
T ss_pred -------------------------CcccC-HHHHHhCCCEEEEeCCChHHHHHHHHHHHhhCCC---CCEEEECCCCCH
Confidence 11122 4566789999999999874 89999999888776 678887765432
Q ss_pred ccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchH--HHhccCceeEEEeCChhhHHHHHHHhCCCCeEEEecCChhH
Q 019978 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIAS--EIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVT 279 (333)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~--ev~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~s~Di~g 279 (333)
.. .+.+.+.++.. ...++..|.... ....+..+ .+.+++++..+.++++| ..+++++..+|.-.
T Consensus 95 ~~----------~~~l~~~~~~~--g~~~~~~p~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~ll-~~g~~~~~~~~~~~ 160 (289)
T 2cvz_A 95 EA----------SRRLAERLREK--GVTYLDAPVSGGTSGAEAGTLT-VMLGGPEEAVERVRPFL-AYAKKVVHVGPVGA 160 (289)
T ss_dssp HH----------HHHHHHHHHTT--TEEEEECCEESHHHHHHHTCEE-EEEESCHHHHHHHGGGC-TTEEEEEEEESTTH
T ss_pred HH----------HHHHHHHHHHc--CCEEEEecCCCChhHHhhCCeE-EEECCCHHHHHHHHHHH-hhcCCeEEcCCCcH
Confidence 21 12344444321 123344464322 22233322 23456677889999999 99998877777766
Q ss_pred HHHHHHHHHH
Q 019978 280 HEVMGGLKNV 289 (333)
Q Consensus 280 ve~~~alkNv 289 (333)
..|.+...|.
T Consensus 161 ~~~~k~~~n~ 170 (289)
T 2cvz_A 161 GHAVKAINNA 170 (289)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6777766665
No 51
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.58 E-value=1.3e-14 Score=135.00 Aligned_cols=171 Identities=15% Similarity=0.116 Sum_probs=116.5
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
++|||+|||+|.||+++|..|++. | ++|++|+ ++++++++..+
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~-g-----~~V~~~~-~~~~~~~~~~~------------------------------ 44 (295)
T 1yb4_A 2 NAMKLGFIGLGIMGSPMAINLARA-G-----HQLHVTT-IGPVADELLSL------------------------------ 44 (295)
T ss_dssp --CEEEECCCSTTHHHHHHHHHHT-T-----CEEEECC-SSCCCHHHHTT------------------------------
T ss_pred CCCEEEEEccCHHHHHHHHHHHhC-C-----CEEEEEc-CHHHHHHHHHc------------------------------
Confidence 568999999999999999999998 8 9999999 87765432100
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh-HHHHHH---HHHhhhhccCCCCEEEEee
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-TKEVFE---EISRYWKERITVPVIISLA 197 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~-~~~vl~---~i~~~l~~~~~~~~Ivs~~ 197 (333)
.+...++++++++++|+||+++|... ++.++. ++.+.+++ +++||+++
T Consensus 45 -------------------------g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~---~~~vv~~s 96 (295)
T 1yb4_A 45 -------------------------GAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEHGCAKTSLQ---GKTIVDMS 96 (295)
T ss_dssp -------------------------TCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTTSSTTSCCT---TEEEEECS
T ss_pred -------------------------CCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCchhHhhcCCC---CCEEEECC
Confidence 12234667788889999999998765 888887 77777766 67888888
Q ss_pred ecCcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHH--HhccCceeEEEeCChhhHHHHHHHhCCCCeEEEecC
Q 019978 198 KGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASE--IYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNG 275 (333)
Q Consensus 198 kGi~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~e--v~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~s~ 275 (333)
+|.... .+.+.+.++. ..+.++..|..... ...+... ++++++++..+.++++|+..+++++..+
T Consensus 97 ~~~~~~----------~~~l~~~~~~--~g~~~~~~p~~~~~~~a~~g~~~-~~~~~~~~~~~~~~~ll~~~g~~~~~~~ 163 (295)
T 1yb4_A 97 SISPIE----------TKRFAQRVNE--MGADYLDAPVSGGEIGAREGTLS-IMVGGEQKVFDRVKPLFDILGKNITLVG 163 (295)
T ss_dssp CCCHHH----------HHHHHHHHHT--TTEEEEECCEESHHHHHHHTCEE-EEEESCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred CCCHHH----------HHHHHHHHHH--cCCeEEEccCCCCHHHHHcCCeE-EEECCCHHHHHHHHHHHHHhcCCEEEeC
Confidence 774321 1223443431 11223334443321 1123322 3445667788999999999899888777
Q ss_pred ChhHHHHHHHHHHHH
Q 019978 276 DLVTHEVMGGLKNVY 290 (333)
Q Consensus 276 Di~gve~~~alkNv~ 290 (333)
|.-...|.+...|.+
T Consensus 164 ~~~~~~~~Kl~~n~~ 178 (295)
T 1yb4_A 164 GNGDGQTCKVANQII 178 (295)
T ss_dssp STTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 777777888877763
No 52
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.58 E-value=2.2e-14 Score=131.56 Aligned_cols=152 Identities=18% Similarity=0.241 Sum_probs=109.8
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
|||+|||+|+||+++|..|++. |. ++|++|+|++++++++..+ +
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~-g~----~~v~~~~r~~~~~~~~~~~---------------------~---------- 44 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQ-GG----YRIYIANRGAEKRERLEKE---------------------L---------- 44 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-CS----CEEEEECSSHHHHHHHHHH---------------------T----------
T ss_pred CEEEEECchHHHHHHHHHHHHC-CC----CeEEEECCCHHHHHHHHHh---------------------c----------
Confidence 6999999999999999999988 61 6899999998765432100 0
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCccc
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEAE 203 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~~~ 203 (333)
.+.+++++++++ ++|+||+|||++.++++++++.+ + +++|+++++|+.++
T Consensus 45 -----------------------g~~~~~~~~~~~-~~D~vi~~v~~~~~~~v~~~l~~--~----~~ivv~~~~g~~~~ 94 (263)
T 1yqg_A 45 -----------------------GVETSATLPELH-SDDVLILAVKPQDMEAACKNIRT--N----GALVLSVAAGLSVG 94 (263)
T ss_dssp -----------------------CCEEESSCCCCC-TTSEEEECSCHHHHHHHHTTCCC--T----TCEEEECCTTCCHH
T ss_pred -----------------------CCEEeCCHHHHh-cCCEEEEEeCchhHHHHHHHhcc--C----CCEEEEecCCCCHH
Confidence 233445555667 99999999999999999987765 2 57899998888753
Q ss_pred ccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhccCceeEEEeC--ChhhHHHHHHHhCCCCeEEEec-CC
Q 019978 204 LEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICG--AEKWRKPLAKFLRRPHFTVWDN-GD 276 (333)
Q Consensus 204 ~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~~~~~~~~~~~--~~~~~~~l~~ll~~~~~~v~~s-~D 276 (333)
.+++.++.. ..+ +...|+++..+..+.+. ++.+. +++..+.++++|+..+++++.. +|
T Consensus 95 ------------~l~~~~~~~-~~~-v~~~~~~~~~~~~g~~~-i~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 155 (263)
T 1yqg_A 95 ------------TLSRYLGGT-RRI-VRVMPNTPGKIGLGVSG-MYAEAEVSETDRRIADRIMKSVGLTVWLDDEE 155 (263)
T ss_dssp ------------HHHHHTTSC-CCE-EEEECCGGGGGTCEEEE-EECCTTSCHHHHHHHHHHHHTTEEEEECSSTT
T ss_pred ------------HHHHHcCCC-CcE-EEEcCCHHHHHcCceEE-EEcCCCCCHHHHHHHHHHHHhCCCEEEeCChh
Confidence 366666532 223 23378888776655432 22333 5678899999999999988776 55
No 53
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.58 E-value=3.6e-14 Score=130.02 Aligned_cols=156 Identities=12% Similarity=0.141 Sum_probs=116.6
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
+|||+|||+|+||+++|..|+++ |.+.+ ++|++|+|++++ .
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~-g~~~~-~~v~~~~~~~~~-~------------------------------------ 44 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANA-NIIKK-ENLFYYGPSKKN-T------------------------------------ 44 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHH-TSSCG-GGEEEECSSCCS-S------------------------------------
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-CCCCC-CeEEEEeCCccc-C------------------------------------
Confidence 47999999999999999999998 72221 589999998752 0
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCcc
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~~ 202 (333)
.+.++++++++++++|+||+|||++.++++++++.+++ + ++.|++.++|+..
T Consensus 45 ------------------------g~~~~~~~~~~~~~~D~vi~~v~~~~~~~v~~~l~~~l-~---~~~vv~~~~gi~~ 96 (262)
T 2rcy_A 45 ------------------------TLNYMSSNEELARHCDIIVCAVKPDIAGSVLNNIKPYL-S---SKLLISICGGLNI 96 (262)
T ss_dssp ------------------------SSEECSCHHHHHHHCSEEEECSCTTTHHHHHHHSGGGC-T---TCEEEECCSSCCH
T ss_pred ------------------------ceEEeCCHHHHHhcCCEEEEEeCHHHHHHHHHHHHHhc-C---CCEEEEECCCCCH
Confidence 12344667777889999999999999999999999887 4 5789999999886
Q ss_pred cccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhccCceeEEEeC--ChhhHHHHHHHhCCCCeEEEecCChhHH
Q 019978 203 ELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICG--AEKWRKPLAKFLRRPHFTVWDNGDLVTH 280 (333)
Q Consensus 203 ~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~~~~~~~~~~~--~~~~~~~l~~ll~~~~~~v~~s~Di~gv 280 (333)
+ .+++.++.. .+ .+..+|+++.....+ .+...... +++..+.++.+|+..+..++..+|..+.
T Consensus 97 ~------------~l~~~~~~~-~~-~v~~~p~~p~~~~~g-~~~~~~~~~~~~~~~~~~~~ll~~~G~~~~~~~~~~~~ 161 (262)
T 2rcy_A 97 G------------KLEEMVGSE-NK-IVWVMPNTPCLVGEG-SFIYCSNKNVNSTDKKYVNDIFNSCGIIHEIKEKDMDI 161 (262)
T ss_dssp H------------HHHHHHCTT-SE-EEEEECCGGGGGTCE-EEEEEECTTCCHHHHHHHHHHHHTSEEEEECCGGGHHH
T ss_pred H------------HHHHHhCCC-Cc-EEEECCChHHHHcCC-eEEEEeCCCCCHHHHHHHHHHHHhCCCEEEeCHHHccH
Confidence 4 366667532 12 346779998877766 44333332 5677899999999998866666665543
No 54
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.58 E-value=1.2e-14 Score=146.72 Aligned_cols=156 Identities=13% Similarity=0.091 Sum_probs=107.1
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
.+|+|||+|+||++||..|+++ | ++|++|+|++++++++.. .. .++
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~-G-----~~V~v~dr~~~~~~~l~~--------~~-------------~~~------- 56 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH-G-----FTVCAYNRTQSKVDHFLA--------NE-------------AKG------- 56 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSSHHHHHHHH--------TT-------------TTT-------
T ss_pred CCEEEEeeHHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHHc--------cc-------------ccC-------
Confidence 5899999999999999999999 8 999999999987654321 00 000
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcC---CCEEEEecCc-hhHHHHHHHHHhhhhccCCCCEEEEeeec
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD---ADIVINGLPS-TETKEVFEEISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~---aDlIIlaVps-~~~~~vl~~i~~~l~~~~~~~~Ivs~~kG 199 (333)
..+..++++++++++ +|+||++||+ +.++++++++.+++++ +++||+++++
T Consensus 57 ----------------------~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~vl~~l~~~l~~---g~iIId~s~~ 111 (497)
T 2p4q_A 57 ----------------------KSIIGATSIEDFISKLKRPRKVMLLVKAGAPVDALINQIVPLLEK---GDIIIDGGNS 111 (497)
T ss_dssp ----------------------SSEECCSSHHHHHHTSCSSCEEEECCCSSHHHHHHHHHHGGGCCT---TCEEEECSCC
T ss_pred ----------------------CCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHHHHHHHHHHhCCC---CCEEEECCCC
Confidence 035566788887776 9999999999 5899999999999887 7899999988
Q ss_pred CcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhccCceeEEEeCChhhHHHHHHHhCCCCeE
Q 019978 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFT 270 (333)
Q Consensus 200 i~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~ 270 (333)
....+ ..+.+.+.+ .|.......+..||..+ ..+ + .++++++++..+.++.+|+..+.+
T Consensus 112 ~~~~~------~~l~~~l~~-~g~~~v~~pVsgg~~~a---~~G-~-~im~gg~~e~~~~v~~ll~~~g~~ 170 (497)
T 2p4q_A 112 HFPDS------NRRYEELKK-KGILFVGSGVSGGEEGA---RYG-P-SLMPGGSEEAWPHIKNIFQSISAK 170 (497)
T ss_dssp CHHHH------HHHHHHHHH-TTCEEEEEEEESHHHHH---HHC-C-EEEEEECGGGHHHHHHHHHHHSCE
T ss_pred ChhHH------HHHHHHHHH-cCCceeCCCcccChhHh---hcC-C-eEEecCCHHHHHHHHHHHHHhcCc
Confidence 76532 112222322 12111112233334332 233 2 345566778889999999876665
No 55
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.57 E-value=1.7e-14 Score=144.78 Aligned_cols=158 Identities=10% Similarity=0.107 Sum_probs=105.3
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
|||+|||+|+||+++|..|+++ | ++|++|+|++++++++..++ . .. +.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~-G-----~~V~v~dr~~~~~~~l~~~~--------g----------~~-~~------- 49 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEK-G-----FKVAVFNRTYSKSEEFMKAN--------A----------SA-PF------- 49 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSHHHHHHHHHHT--------T----------TS-TT-------
T ss_pred CEEEEEChHHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHHHhc--------C----------CC-CC-------
Confidence 7999999999999999999999 8 99999999987765432110 0 00 00
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhc---CCCEEEEecCch-hHHHHHHHHHhhhhccCCCCEEEEeeec
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW---DADIVINGLPST-ETKEVFEEISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~---~aDlIIlaVps~-~~~~vl~~i~~~l~~~~~~~~Ivs~~kG 199 (333)
+ ..+..++++++++. ++|+||++||+. .++++++++.+++++ +++||++++|
T Consensus 50 ---~------------------~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~vl~~l~~~l~~---g~iIId~sng 105 (478)
T 1pgj_A 50 ---A------------------GNLKAFETMEAFAASLKKPRKALILVQAGAATDSTIEQLKKVFEK---GDILVDTGNA 105 (478)
T ss_dssp ---G------------------GGEEECSCHHHHHHHBCSSCEEEECCCCSHHHHHHHHHHHHHCCT---TCEEEECCCC
T ss_pred ---C------------------CCeEEECCHHHHHhcccCCCEEEEecCChHHHHHHHHHHHhhCCC---CCEEEECCCC
Confidence 0 13566788888776 499999999994 899999999998877 6889999988
Q ss_pred CcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchH-HHhccCceeEEEeCChhhHHHHHHHhCCCCeE
Q 019978 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIAS-EIYNKEYANARICGAEKWRKPLAKFLRRPHFT 270 (333)
Q Consensus 200 i~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~-ev~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~ 270 (333)
....+ +.+.+.++... +.++..|.... +.....++ ++.+++++..+.++.+|+..+.+
T Consensus 106 ~~~~~----------~~l~~~l~~~g--~~~v~~pv~gg~~~a~~g~~-i~~gg~~~~~~~v~~ll~~~g~~ 164 (478)
T 1pgj_A 106 HFKDQ----------GRRAQQLEAAG--LRFLGMGISGGEEGARKGPA-FFPGGTLSVWEEIRPIVEAAAAK 164 (478)
T ss_dssp CHHHH----------HHHHHHHHTTT--CEEEEEEEESHHHHHHHCCE-EEEEECHHHHHHHHHHHHHHSCB
T ss_pred ChHHH----------HHHHHHHHHCC--CeEEEeeccCCHHHHhcCCe-EeccCCHHHHHHHHHHHHHhccc
Confidence 76531 22333332111 11222232221 12222233 34555677788888888865554
No 56
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.56 E-value=7.9e-14 Score=129.96 Aligned_cols=168 Identities=15% Similarity=0.163 Sum_probs=109.2
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
|||+|||+|+||+++|..|++. | ++|++|+|++++++++..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~-g-----~~V~~~~~~~~~~~~~~~--------------------------------- 41 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKH-G-----YPLIIYDVFPDACKEFQD--------------------------------- 41 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHT-T-----CCEEEECSSTHHHHHHHT---------------------------------
T ss_pred CeEEEEeccHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHHH---------------------------------
Confidence 6899999999999999999998 8 899999999875542110
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecC-chhHHHHHHHHH---hhhhccCCCCEEEEeeec
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLP-STETKEVFEEIS---RYWKERITVPVIISLAKG 199 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVp-s~~~~~vl~~i~---~~l~~~~~~~~Ivs~~kG 199 (333)
..+.+++++++++.++|+||+++| ++.++.++.++. +.+++ ++++|+ ++|
T Consensus 42 ----------------------~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~~~~l~~---~~~vv~-~s~ 95 (296)
T 2gf2_A 42 ----------------------AGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGILKKVKK---GSLLID-SST 95 (296)
T ss_dssp ----------------------TTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSGGGTCCT---TCEEEE-CSC
T ss_pred ----------------------cCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhHHhcCCC---CCEEEE-CCC
Confidence 024455778888889999999995 568899888754 34555 678888 788
Q ss_pred CcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHh--ccCceeEEEeCChhhHHHHHHHhCCCCeEEEecCCh
Q 019978 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIY--NKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDL 277 (333)
Q Consensus 200 i~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~--~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~s~Di 277 (333)
+.+.+ ...+.+.+.+ .+ ..+...|....... .+. ..++.+++++..+.++++|+..+++++...+.
T Consensus 96 ~~~~~-----~~~~~~~~~~-~g-----~~~~~~p~~~g~~~a~~~~-~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~~ 163 (296)
T 2gf2_A 96 IDPAV-----SKELAKEVEK-MG-----AVFMDAPVSGGVGAARSGN-LTFMVGGVEDEFAAAQELLGCMGSNVVYCGAV 163 (296)
T ss_dssp CCHHH-----HHHHHHHHHH-TT-----CEEEECCEESHHHHHHHTC-EEEEEESCGGGHHHHHHHHTTTEEEEEEEEST
T ss_pred CCHHH-----HHHHHHHHHH-cC-----CEEEEcCCCCChhHHhcCc-EEEEeCCCHHHHHHHHHHHHHHcCCeEEeCCc
Confidence 87652 1112222222 12 11222333322111 222 22344667788999999999999988765542
Q ss_pred hHHHHHHHHHH
Q 019978 278 VTHEVMGGLKN 288 (333)
Q Consensus 278 ~gve~~~alkN 288 (333)
-...+.+...|
T Consensus 164 g~~~~~kl~~n 174 (296)
T 2gf2_A 164 GTGQAAKICNN 174 (296)
T ss_dssp THHHHHHHHHH
T ss_pred cHHHHHHHHHH
Confidence 22234444444
No 57
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.55 E-value=4.7e-14 Score=141.38 Aligned_cols=155 Identities=12% Similarity=0.066 Sum_probs=107.2
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
+|||+|||+|+||+++|..|+++ | ++|.+|+|++++++++..+ .++
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~-G-----~~V~v~dr~~~~~~~l~~~----------------------~~~------ 50 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESR-G-----YTVAIYNRTTSKTEEVFKE----------------------HQD------ 50 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSHHHHHHHHHH----------------------TTT------
T ss_pred CCcEEEEeeHHHHHHHHHHHHhC-C-----CEEEEEcCCHHHHHHHHHh----------------------CcC------
Confidence 37999999999999999999999 8 8999999998766542210 000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcC---CCEEEEecCc-hhHHHHHHHHHhhhhccCCCCEEEEeee
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD---ADIVINGLPS-TETKEVFEEISRYWKERITVPVIISLAK 198 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~---aDlIIlaVps-~~~~~vl~~i~~~l~~~~~~~~Ivs~~k 198 (333)
..+..++++++++.+ +|+||++||+ +.++++++++.+++++ +++||++++
T Consensus 51 -----------------------~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~vl~~l~~~l~~---g~iiId~s~ 104 (474)
T 2iz1_A 51 -----------------------KNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDATIKSLLPLLDI---GDILIDGGN 104 (474)
T ss_dssp -----------------------SCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHHHHHHGGGCCT---TCEEEECSC
T ss_pred -----------------------CCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHHHHHHHhhCCC---CCEEEECCC
Confidence 035567788887765 9999999999 5899999999998876 688999988
Q ss_pred cCcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHH-hccCceeEEEeCChhhHHHHHHHhCCCCeE
Q 019978 199 GVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEI-YNKEYANARICGAEKWRKPLAKFLRRPHFT 270 (333)
Q Consensus 199 Gi~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev-~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~ 270 (333)
|....+ +.+.+.+... .+.++..|....+. ....++ ++.+++++..+.++.+|+..+.+
T Consensus 105 ~~~~~~----------~~l~~~l~~~--g~~~v~~pv~gg~~~a~~g~~-i~~gg~~~~~~~v~~ll~~~g~~ 164 (474)
T 2iz1_A 105 THFPDT----------MRRNAELADS--GINFIGTGVSGGEKGALLGPS-MMPGGQKEAYDLVAPIFEQIAAK 164 (474)
T ss_dssp CCHHHH----------HHHHHHTTTS--SCEEEEEEECSHHHHHHHCCC-EEEEECHHHHHHHHHHHHHHSCB
T ss_pred CCHHHH----------HHHHHHHHHC--CCeEECCCCCCChhhhccCCe-EEecCCHHHHHHHHHHHHHHhcc
Confidence 876431 2234444321 12233445443221 222233 34556777888889888865554
No 58
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.54 E-value=2.1e-13 Score=129.39 Aligned_cols=173 Identities=9% Similarity=0.069 Sum_probs=117.1
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCe-eEEEEecCC--cchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPG--RSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~-~V~l~~r~~--~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~ 118 (333)
.+|||+|||+|.||+++|..|++. | + +|++|+|++ +..+.+ ..
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~-G-----~~~V~~~dr~~~~~~~~~~--------------------------~~-- 68 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQA-G-----AIDMAAYDAASAESWRPRA--------------------------EE-- 68 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHH-S-----CCEEEEECSSCHHHHHHHH--------------------------HH--
T ss_pred CCCEEEEECccHHHHHHHHHHHHC-C-----CCeEEEEcCCCCHHHHHHH--------------------------HH--
Confidence 568999999999999999999999 8 8 999999974 332211 00
Q ss_pred hhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeee
Q 019978 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (333)
Q Consensus 119 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~k 198 (333)
..+..+++++++++++|+||++||++...++++++.+.+++ +++||.++
T Consensus 69 ---------------------------~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~~~~l~~~l~~---~~ivvd~s- 117 (312)
T 3qsg_A 69 ---------------------------LGVSCKASVAEVAGECDVIFSLVTAQAALEVAQQAGPHLCE---GALYADFT- 117 (312)
T ss_dssp ---------------------------TTCEECSCHHHHHHHCSEEEECSCTTTHHHHHHHHGGGCCT---TCEEEECC-
T ss_pred ---------------------------CCCEEeCCHHHHHhcCCEEEEecCchhHHHHHHhhHhhcCC---CCEEEEcC-
Confidence 03456678888899999999999999988899999988876 67787765
Q ss_pred cCcccccCCccCCCHHHHHHhHh-CCCCCcEEEEcCCCchHHHhccCceeEEEeCChhhHHHHHHHhCCCCeEEEecCC-
Q 019978 199 GVEAELEAVPRIITPTQMINRAT-GVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGD- 276 (333)
Q Consensus 199 Gi~~~~~~~~~~~~~se~i~~~l-g~~~~~~~vl~GP~~a~ev~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~s~D- 276 (333)
++.+.+ ...+.+.+.+.. |..... +-++||..+. .+..+ .++++++. +.++.+|+..+.++....+
T Consensus 118 t~~~~~-----~~~~~~~~~~~~~g~~~vd-~pv~g~~~~~---~g~l~-i~vgg~~~--~~~~~ll~~~g~~~~~~g~~ 185 (312)
T 3qsg_A 118 SCSPAV-----KRAIGDVISRHRPSAQYAA-VAVMSAVKPH---GHRVP-LVVDGDGA--RRFQAAFTLYGCRIEVLDGE 185 (312)
T ss_dssp CCCHHH-----HHHHHHHHHHHCTTCEEEE-EEECSCSTTT---GGGSE-EEEESTTH--HHHHHHHHTTTCEEEECCSS
T ss_pred CCCHHH-----HHHHHHHHHhhcCCCeEEe-ccccCCchhh---cCCEE-EEecCChH--HHHHHHHHHhCCCeEEcCCC
Confidence 333331 122233333321 321111 2345654432 23232 34455444 8899999998888877776
Q ss_pred hhHHHHHHHHHHHHH
Q 019978 277 LVTHEVMGGLKNVYA 291 (333)
Q Consensus 277 i~gve~~~alkNv~A 291 (333)
+-..++.+...|.+.
T Consensus 186 ~g~a~~~Kl~~n~~~ 200 (312)
T 3qsg_A 186 VGGAALLKMCRSAVL 200 (312)
T ss_dssp TTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 667788888888643
No 59
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=99.53 E-value=2.9e-13 Score=134.59 Aligned_cols=215 Identities=15% Similarity=0.082 Sum_probs=136.9
Q ss_pred CccccccccccchHHhhhHHHHhhccCCCCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhh
Q 019978 13 SSNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEH 92 (333)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~ 92 (333)
||.++-|||+|-+- ..++|.+|+|||+|.+|..+|..|++. | |+|+.+|.++++++.++
T Consensus 3 ~~~~~~~~~~~~~p------------~~~~m~~IaViGlGYVGLp~A~~~A~~-G-----~~V~g~Did~~kV~~ln--- 61 (444)
T 3vtf_A 3 SSHHHHHHSSGLVP------------RGSHMASLSVLGLGYVGVVHAVGFALL-G-----HRVVGYDVNPSIVERLR--- 61 (444)
T ss_dssp ----------CCCC------------TTCCCCEEEEECCSHHHHHHHHHHHHH-T-----CEEEEECSCHHHHHHHH---
T ss_pred cccccccccCCcCC------------CCCCCCEEEEEccCHHHHHHHHHHHhC-C-----CcEEEEECCHHHHHHHH---
Confidence 34456677777543 234567999999999999999999999 8 99999999998887654
Q ss_pred HHHHHhhhhhHHHHhhhcccccchhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc--
Q 019978 93 LFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-- 170 (333)
Q Consensus 93 l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps-- 170 (333)
++. .|.+.+++. |++.+.+.. .++++++|.++++.++|++|+|||.
T Consensus 62 ------~G~--------~pi~Epgl~-----------ell~~~~~~-------g~l~~tt~~~~ai~~ad~~~I~VpTP~ 109 (444)
T 3vtf_A 62 ------AGR--------PHIYEPGLE-----------EALGRALSS-------GRLSFAESAEEAVAATDATFIAVGTPP 109 (444)
T ss_dssp ------TTC--------CSSCCTTHH-----------HHHHHHHHT-------TCEEECSSHHHHHHTSSEEEECCCCCB
T ss_pred ------CCC--------CCCCCCCHH-----------HHHHHHHHc-------CCeeEEcCHHHHHhcCCceEEEecCCC
Confidence 221 233444332 333332211 2688999999999999999999975
Q ss_pred --------hhHHHHHHHHHhhhhccCCCCEEEEeeecCcccccCCccCCCH-HHHHHhHhCCCCCcEEEEcCCCchHHHh
Q 019978 171 --------TETKEVFEEISRYWKERITVPVIISLAKGVEAELEAVPRIITP-TQMINRATGVPIENILYLGGPNIASEIY 241 (333)
Q Consensus 171 --------~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~~~~~~~~~~~~~-se~i~~~lg~~~~~~~vl~GP~~a~ev~ 241 (333)
.++.++.+.|.+++++.-++++ |..-..+.+++ .+.+ ...+++..+ ...+.+.+.|.+..+..
T Consensus 110 ~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~l-VV~eSTVppGt-----te~~~~~~l~~~~~--~~~f~v~~~PErl~eG~ 181 (444)
T 3vtf_A 110 APDGSADLRYVEAAARAVGRGIRAKGRWHL-VVVKSTVPPGT-----TEGLVARAVAEEAG--GVKFSVASNPEFLREGS 181 (444)
T ss_dssp CTTSSBCCHHHHHHHHHHHHHHHHHCSCCE-EEECSCCCTTT-----TTTHHHHHHHTTTT--TCCCEEEECCCCCCTTS
T ss_pred CCCCCCCcHHHHHHHHHHHHHHhhcCCCeE-EEEeCCCCCch-----HHHHHHHHHHHhCC--CCCceeecCcccccCCc
Confidence 3689999999998863211344 44444566653 3333 334444333 24467888999876543
Q ss_pred c----cCceeEEE-eCChhhHHHHHHHhCCCCeEEEecCChhHHHHHHHHHHH
Q 019978 242 N----KEYANARI-CGAEKWRKPLAKFLRRPHFTVWDNGDLVTHEVMGGLKNV 289 (333)
Q Consensus 242 ~----~~~~~~~~-~~~~~~~~~l~~ll~~~~~~v~~s~Di~gve~~~alkNv 289 (333)
. ..+..+++ +.++...+.+..++....-.+ +..|+..+|.++.+-|.
T Consensus 182 a~~d~~~~~riViG~~~~~a~~~~~~ly~~~~~~~-~~~~~~~AE~~Kl~eN~ 233 (444)
T 3vtf_A 182 ALEDFFKPDRIVIGAGDERAASFLLDVYKAVDAPK-LVMKPREAELVKYASNV 233 (444)
T ss_dssp HHHHHHSCSCEEEEESSHHHHHHHHHHTTTSCSCE-EEECHHHHHHHHHHHHH
T ss_pred cccccccCCcEEEcCCCHHHHHHHHHHHhccCCCE-EEechhHHHHHHHHHHH
Confidence 2 12333444 445567778888887654333 34688999999988886
No 60
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.52 E-value=2.2e-13 Score=129.65 Aligned_cols=176 Identities=12% Similarity=0.013 Sum_probs=116.9
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
+|||+|||+|.||+++|..|+++ |. ++|++|+|+++..++... .... +..
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~-G~----~~V~~~dr~~~~~~~~~~-----~~~~--------------~~~------ 73 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGR-NA----ARLAAYDLRFNDPAASGA-----LRAR--------------AAE------ 73 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TC----SEEEEECGGGGCTTTHHH-----HHHH--------------HHH------
T ss_pred CCeEEEECccHHHHHHHHHHHHc-CC----CeEEEEeCCCccccchHH-----HHHH--------------HHH------
Confidence 37999999999999999999998 51 699999999753322110 0000 000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEec-CHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCc
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVT-NLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~-d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~ 201 (333)
..+ .+ +++++++++|+||++||++...+.++++.+.+++ +++||+++ ++.
T Consensus 74 -----------------------~g~--~~~s~~e~~~~aDvVi~avp~~~~~~~~~~i~~~l~~---~~ivv~~s-t~~ 124 (317)
T 4ezb_A 74 -----------------------LGV--EPLDDVAGIACADVVLSLVVGAATKAVAASAAPHLSD---EAVFIDLN-SVG 124 (317)
T ss_dssp -----------------------TTC--EEESSGGGGGGCSEEEECCCGGGHHHHHHHHGGGCCT---TCEEEECC-SCC
T ss_pred -----------------------CCC--CCCCHHHHHhcCCEEEEecCCHHHHHHHHHHHhhcCC---CCEEEECC-CCC
Confidence 023 34 6778889999999999999888888999988876 67888766 444
Q ss_pred ccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhccCceeEEEeCChhhHHHHHHHhCCCCeEEEecCC-hhHH
Q 019978 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGD-LVTH 280 (333)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~s~D-i~gv 280 (333)
+.+ .+.+.+.+.+ .|.. ..-+.++||..+. .+.++ .+++++++ +.++.+|+..+.++....+ +-..
T Consensus 125 p~~-----~~~~~~~l~~-~g~~-~~d~pv~g~~~a~---~g~l~-i~vgg~~~--~~~~~ll~~~g~~v~~~g~~~g~a 191 (317)
T 4ezb_A 125 PDT-----KALAAGAIAT-GKGS-FVEGAVMARVPPY---AEKVP-ILVAGRRA--VEVAERLNALGMNLEAVGETPGQA 191 (317)
T ss_dssp HHH-----HHHHHHHHHT-SSCE-EEEEEECSCSTTT---GGGSE-EEEESTTH--HHHHHHHHTTTCEEEEEESSTTHH
T ss_pred HHH-----HHHHHHHHHH-cCCe-EEeccCCCCchhh---cCCEE-EEEeCChH--HHHHHHHHHhCCCeEEeCCCcCHH
Confidence 432 1222333322 1211 1113467786543 33333 34455444 8899999988888876666 7777
Q ss_pred HHHHHHHHHH
Q 019978 281 EVMGGLKNVY 290 (333)
Q Consensus 281 e~~~alkNv~ 290 (333)
++.+...|.+
T Consensus 192 ~~~Kl~~N~~ 201 (317)
T 4ezb_A 192 SSLKMIRSVM 201 (317)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888888864
No 61
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.48 E-value=8.7e-14 Score=134.93 Aligned_cols=171 Identities=13% Similarity=0.127 Sum_probs=115.2
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
.|||+|||+|.||..+|..|++. | ++|++|+|++++++++..
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~-G-----~~V~v~dr~~~~~~~l~~-------------------------------- 63 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKG-G-----HECVVYDLNVNAVQALER-------------------------------- 63 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHT--------------------------------
T ss_pred CCEEEEECchHHHHHHHHHHHhC-C-----CEEEEEeCCHHHHHHHHH--------------------------------
Confidence 48999999999999999999999 8 999999999876543210
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCC---CEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeec
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDA---DIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~a---DlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kG 199 (333)
..+...+++++++.++ |+||++||+..++++++++.+.+++ +++||+++++
T Consensus 64 -----------------------~g~~~~~s~~e~~~~a~~~DvVi~~vp~~~v~~vl~~l~~~l~~---g~iiId~st~ 117 (358)
T 4e21_A 64 -----------------------EGIAGARSIEEFCAKLVKPRVVWLMVPAAVVDSMLQRMTPLLAA---NDIVIDGGNS 117 (358)
T ss_dssp -----------------------TTCBCCSSHHHHHHHSCSSCEEEECSCGGGHHHHHHHHGGGCCT---TCEEEECSSC
T ss_pred -----------------------CCCEEeCCHHHHHhcCCCCCEEEEeCCHHHHHHHHHHHHhhCCC---CCEEEeCCCC
Confidence 0233456788888888 9999999999999999999998877 7888887766
Q ss_pred CcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhccCceeEEEeCChhhHHHHHHHhCCCC-----------
Q 019978 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPH----------- 268 (333)
Q Consensus 200 i~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~~~~~~~~~~~~~~~~~~l~~ll~~~~----------- 268 (333)
..... ....+.+.+ .+.......+..||..+. .+ + .++++++++..+.++.+|+..+
T Consensus 118 ~~~~~------~~~~~~l~~-~g~~~vdapVsGg~~~a~---~G-~-~im~GG~~~a~~~~~~ll~~lg~~~~~~~~~~~ 185 (358)
T 4e21_A 118 HYQDD------IRRADQMRA-QGITYVDVGTSGGIFGLE---RG-Y-CLMIGGEKQAVERLDPVFRTLAPGIGAAPRTPG 185 (358)
T ss_dssp CHHHH------HHHHHHHHT-TTCEEEEEEEECGGGHHH---HC-C-EEEEESCHHHHHHTHHHHHHHSCCGGGSCCCTT
T ss_pred ChHHH------HHHHHHHHH-CCCEEEeCCCCCCHHHHh---cC-C-eeeecCCHHHHHHHHHHHHHhccccccCccccc
Confidence 54321 111121211 121111233555565443 33 3 3456777777777777776544
Q ss_pred ---------eEEEecCChhHHHHHHHHHHH
Q 019978 269 ---------FTVWDNGDLVTHEVMGGLKNV 289 (333)
Q Consensus 269 ---------~~v~~s~Di~gve~~~alkNv 289 (333)
-.+.+..+.-..++.+.+.|.
T Consensus 186 ~~~~~~~~~~~~~~~G~~G~g~~~Kl~~n~ 215 (358)
T 4e21_A 186 REKREGTAELGYLHCGPSGAGHFVKMVHNG 215 (358)
T ss_dssp GGGCCSSGGGTEEEEESTTHHHHHHHHHHH
T ss_pred ccccccccccceEEECCccHHHHHHHHHHH
Confidence 234444455455777777775
No 62
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.48 E-value=5.5e-13 Score=127.38 Aligned_cols=184 Identities=15% Similarity=0.159 Sum_probs=115.8
Q ss_pred CCCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhh
Q 019978 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (333)
Q Consensus 40 ~~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (333)
+..++||+|||+|.||+++|..|+++ | ++|++|+++++.++++... +... +.++... .++++
T Consensus 3 ~~~~~kI~vIGaG~MG~~iA~~la~~-G-----~~V~l~d~~~~~~~~~~~~-----i~~~---l~~l~~~-G~~~g--- 64 (319)
T 2dpo_A 3 SPAAGDVLIVGSGLVGRSWAMLFASG-G-----FRVKLYDIEPRQITGALEN-----IRKE---MKSLQQS-GSLKG--- 64 (319)
T ss_dssp ----CEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSCHHHHHHHHHH-----HHHH---HHHHHHT-TCCCS---
T ss_pred CCCCceEEEEeeCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHHHH-----HHHH---HHHHHHc-Ccccc---
Confidence 33568999999999999999999999 8 9999999999877654321 1110 0000000 01110
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch--hHHHHHHHHHhhhhccCCCCEEEEee
Q 019978 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST--ETKEVFEEISRYWKERITVPVIISLA 197 (333)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~--~~~~vl~~i~~~l~~~~~~~~Ivs~~ 197 (333)
.+.++++ +.++.+++|+++++++||+||+|||+. ..+++++++.+++++ +++|++.+
T Consensus 65 -----~~~~~~~-------------~~~i~~~~~~~eav~~aDlVieavpe~~~~k~~v~~~l~~~~~~---~~Ii~s~t 123 (319)
T 2dpo_A 65 -----SLSAEEQ-------------LSLISSCTNLAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDD---RVVLSSSS 123 (319)
T ss_dssp -----SSCHHHH-------------HHTEEEECCHHHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCS---SSEEEECC
T ss_pred -----ccchHHH-------------hhceEEeCCHHHHHhcCCEEEEeccCCHHHHHHHHHHHHhhCCC---CeEEEEeC
Confidence 0000000 025788999999999999999999984 578899999998887 78888888
Q ss_pred ecCcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhccCceeEEE-e--CChhhHHHHHHHhCCCCeEEEe-
Q 019978 198 KGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARI-C--GAEKWRKPLAKFLRRPHFTVWD- 273 (333)
Q Consensus 198 kGi~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~~~~~~~~~-~--~~~~~~~~l~~ll~~~~~~v~~- 273 (333)
+|+... .+++.++.+ ..+ +...|..+... .+...+. + .+++..+.+..+|+..|..+..
T Consensus 124 S~i~~~------------~la~~~~~~-~r~-ig~Hp~~P~~~---~~lveiv~g~~t~~e~~~~~~~l~~~lGk~~v~v 186 (319)
T 2dpo_A 124 SCLLPS------------KLFTGLAHV-KQC-IVAHPVNPPYY---IPLVELVPHPETSPATVDRTHALMRKIGQSPVRV 186 (319)
T ss_dssp SSCCHH------------HHHTTCTTG-GGE-EEEEECSSTTT---CCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEC
T ss_pred CChHHH------------HHHHhcCCC-CCe-EEeecCCchhh---cceEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEE
Confidence 776653 255555432 122 22233333211 1222223 3 4667899999999988876654
Q ss_pred cCChhH
Q 019978 274 NGDLVT 279 (333)
Q Consensus 274 s~Di~g 279 (333)
..|.-|
T Consensus 187 ~~~~~G 192 (319)
T 2dpo_A 187 LKEIDG 192 (319)
T ss_dssp SSCCTT
T ss_pred CCCcCC
Confidence 356555
No 63
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.47 E-value=2.8e-13 Score=128.96 Aligned_cols=161 Identities=17% Similarity=0.138 Sum_probs=106.0
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCe--eEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~--~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
+|||+|||+|.||+++|..|.+. | + +|++|+|+++.++++.. . +.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~-G-----~~~~V~~~dr~~~~~~~a~~-----------------------~-G~--- 79 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS-G-----FKGKIYGYDINPESISKAVD-----------------------L-GI--- 79 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT-T-----CCSEEEEECSCHHHHHHHHH-----------------------T-TS---
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-C-----CCCEEEEEECCHHHHHHHHH-----------------------C-CC---
Confidence 48999999999999999999999 8 7 99999999875542110 0 00
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHH-HhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeec
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQE-AVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~e-a~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kG 199 (333)
....++++++ ++++||+||+|||.+.+.++++++.+++++ +++|++++.
T Consensus 80 --------------------------~~~~~~~~~~~~~~~aDvVilavp~~~~~~vl~~l~~~l~~---~~iv~d~~S- 129 (314)
T 3ggo_A 80 --------------------------IDEGTTSIAKVEDFSPDFVMLSSPVRTFREIAKKLSYILSE---DATVTDQGS- 129 (314)
T ss_dssp --------------------------CSEEESCTTGGGGGCCSEEEECSCGGGHHHHHHHHHHHSCT---TCEEEECCS-
T ss_pred --------------------------cchhcCCHHHHhhccCCEEEEeCCHHHHHHHHHHHhhccCC---CcEEEECCC-
Confidence 0134567777 789999999999999999999999999887 777776542
Q ss_pred CcccccCCccCCCHHHHHHhHhCCC---CCcEE--EEcCCCchH-HHhccCceeEEEe--CChhhHHHHHHHhCCCCeEE
Q 019978 200 VEAELEAVPRIITPTQMINRATGVP---IENIL--YLGGPNIAS-EIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTV 271 (333)
Q Consensus 200 i~~~~~~~~~~~~~se~i~~~lg~~---~~~~~--vl~GP~~a~-ev~~~~~~~~~~~--~~~~~~~~l~~ll~~~~~~v 271 (333)
+... +.+.+++.++.. .+|+. ..+||..+. ++..+.++.++.. .+++..+.++++|+..|.++
T Consensus 130 vk~~---------~~~~~~~~l~~~~v~~hPm~G~e~sG~~~A~~~Lf~g~~~il~~~~~~~~~~~~~v~~l~~~~G~~v 200 (314)
T 3ggo_A 130 VKGK---------LVYDLENILGKRFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGVV 200 (314)
T ss_dssp CCTH---------HHHHHHHHHGGGEECEEECCCCCCCSGGGCCTTTTTTCEEEECCCTTSCHHHHHHHHHHHHHTTCEE
T ss_pred CcHH---------HHHHHHHhcCCCEEecCcccCCcccchhhhhhhhhcCCEEEEEeCCCCCHHHHHHHHHHHHHcCCEE
Confidence 2111 123344444211 01110 112343333 2334444333322 35678999999999999877
Q ss_pred EecC
Q 019978 272 WDNG 275 (333)
Q Consensus 272 ~~s~ 275 (333)
+..+
T Consensus 201 ~~~~ 204 (314)
T 3ggo_A 201 EYMS 204 (314)
T ss_dssp EECC
T ss_pred EEcC
Confidence 6543
No 64
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.47 E-value=2.6e-13 Score=126.32 Aligned_cols=164 Identities=15% Similarity=0.093 Sum_probs=108.4
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
+|||+|||+|+||+++|..|++. |. +++|++|+|++++++++.. . +.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~-g~---~~~V~~~d~~~~~~~~~~~---------~---------------g~----- 52 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRD-HP---HYKIVGYNRSDRSRDIALE---------R---------------GI----- 52 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-CT---TSEEEEECSSHHHHHHHHH---------T---------------TS-----
T ss_pred cceEEEEeeCHHHHHHHHHHHhC-CC---CcEEEEEcCCHHHHHHHHH---------c---------------CC-----
Confidence 58999999999999999999987 51 2689999998865442110 0 00
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhh-hhccCCCCEEEEeeecCc
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRY-WKERITVPVIISLAKGVE 201 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~-l~~~~~~~~Ivs~~kGi~ 201 (333)
....+++++++++++|+||+|||++...++++++.++ +++ +++|++++++..
T Consensus 53 ------------------------~~~~~~~~~~~~~~aDvVilavp~~~~~~v~~~l~~~~l~~---~~ivi~~~~~~~ 105 (290)
T 3b1f_A 53 ------------------------VDEATADFKVFAALADVIILAVPIKKTIDFIKILADLDLKE---DVIITDAGSTKY 105 (290)
T ss_dssp ------------------------CSEEESCTTTTGGGCSEEEECSCHHHHHHHHHHHHTSCCCT---TCEEECCCSCHH
T ss_pred ------------------------cccccCCHHHhhcCCCEEEEcCCHHHHHHHHHHHHhcCCCC---CCEEEECCCCch
Confidence 0134456667788999999999999999999999988 876 677765543222
Q ss_pred ccccCCccCCCHHHHHHhHhCCCCCcEE--------EEcCCCchH-HHhccCceeEEE--eCChhhHHHHHHHhCCCCeE
Q 019978 202 AELEAVPRIITPTQMINRATGVPIENIL--------YLGGPNIAS-EIYNKEYANARI--CGAEKWRKPLAKFLRRPHFT 270 (333)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~~~~~--------vl~GP~~a~-ev~~~~~~~~~~--~~~~~~~~~l~~ll~~~~~~ 270 (333)
.. .+.+.+.++.....+. ..+||..+. ++..+.++..+. ..+++..+.++++|+..|++
T Consensus 106 ~~----------~~~l~~~l~~~~~~~v~~~P~~g~~~~g~~~a~~~l~~g~~~~~~~~~~~~~~~~~~v~~l~~~~G~~ 175 (290)
T 3b1f_A 106 EI----------VRAAEYYLKDKPVQFVGSHPMAGSHKSGAVAANVNLFENAYYIFSPSCLTKPNTIPALQDLLSGLHAR 175 (290)
T ss_dssp HH----------HHHHHHHHTTSSCEEEEEEEC-----CCTTSCCTTTTTTSEEEEEECTTCCTTHHHHHHHHTGGGCCE
T ss_pred HH----------HHHHHHhccccCCEEEEeCCcCCCCcchHHHhhHHHhCCCeEEEecCCCCCHHHHHHHHHHHHHcCCE
Confidence 11 1345555542011111 112566543 344554444333 24567899999999999998
Q ss_pred EEecCC
Q 019978 271 VWDNGD 276 (333)
Q Consensus 271 v~~s~D 276 (333)
++..++
T Consensus 176 ~~~~~~ 181 (290)
T 3b1f_A 176 YVEIDA 181 (290)
T ss_dssp EEECCH
T ss_pred EEEcCH
Confidence 876654
No 65
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.46 E-value=1.4e-12 Score=115.76 Aligned_cols=185 Identities=15% Similarity=0.224 Sum_probs=121.3
Q ss_pred ceEEEEC-CCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 44 LRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 44 ~kI~IIG-aG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
|||+|+| +|.||++++..|++. | ++|++|+|++++++++..+. . .+++.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~-g-----~~V~~~~r~~~~~~~~~~~~--------~----------~~~~~------ 50 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATL-G-----HEIVVGSRREEKAEAKAAEY--------R----------RIAGD------ 50 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT-T-----CEEEEEESSHHHHHHHHHHH--------H----------HHHSS------
T ss_pred CeEEEEcCCCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHHHHh--------c----------ccccc------
Confidence 6999999 999999999999998 8 89999999987654322100 0 00100
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCcc
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~~ 202 (333)
..+. .++++++++++|+||+++|++.++++++++.+.++ +++++++++|+..
T Consensus 51 -----------------------~~~~-~~~~~~~~~~~D~Vi~~~~~~~~~~~~~~l~~~~~----~~~vi~~~~g~~~ 102 (212)
T 1jay_A 51 -----------------------ASIT-GMKNEDAAEACDIAVLTIPWEHAIDTARDLKNILR----EKIVVSPLVPVSR 102 (212)
T ss_dssp -----------------------CCEE-EEEHHHHHHHCSEEEECSCHHHHHHHHHHTHHHHT----TSEEEECCCCEEC
T ss_pred -----------------------CCCC-hhhHHHHHhcCCEEEEeCChhhHHHHHHHHHHHcC----CCEEEEcCCCcCc
Confidence 0243 35677778899999999999999999999988773 5799999999985
Q ss_pred cccCC--ccCCCHHHHHHhHhCCCCCcEEEEcCCCc-hHHHhc--cCcee-EEEeC-ChhhHHHHHHHhCCC-CeEEEec
Q 019978 203 ELEAV--PRIITPTQMINRATGVPIENILYLGGPNI-ASEIYN--KEYAN-ARICG-AEKWRKPLAKFLRRP-HFTVWDN 274 (333)
Q Consensus 203 ~~~~~--~~~~~~se~i~~~lg~~~~~~~vl~GP~~-a~ev~~--~~~~~-~~~~~-~~~~~~~l~~ll~~~-~~~v~~s 274 (333)
++... .......+.+++.++. ..+ +...|.. +..... ..... ...++ +++..+.++++|+.. +..+...
T Consensus 103 ~~~~~~~~~g~~~~~~l~~~~~~--~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~l~~~~~G~~~~~~ 179 (212)
T 1jay_A 103 GAKGFTYSSERSAAEIVAEVLES--EKV-VSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDA 179 (212)
T ss_dssp CTTCCEECCSSCHHHHHHHHHTC--SCE-EECCTTCCHHHHHCTTCCCCEEEEEEESCHHHHHHHHHHHHHSTTEEEEEE
T ss_pred CCceeecCCCCcHHHHHHHhCCC--CeE-EEEccchHHHHhhCcCCCCCccEEEECCcHHHHHHHHHHHHHcCCCCceec
Confidence 31000 0011224557777752 222 3344444 333332 11111 23334 467889999999999 9988777
Q ss_pred CChhHHHHHHHHHHH
Q 019978 275 GDLVTHEVMGGLKNV 289 (333)
Q Consensus 275 ~Di~gve~~~alkNv 289 (333)
.++-...|.+.+-|.
T Consensus 180 ~~~~~a~~~k~~~~~ 194 (212)
T 1jay_A 180 GPLSNSRLVESLTPL 194 (212)
T ss_dssp ESGGGHHHHHTHHHH
T ss_pred cchhHHHHhcchHHH
Confidence 776555665555443
No 66
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.46 E-value=1.2e-12 Score=119.84 Aligned_cols=153 Identities=16% Similarity=0.140 Sum_probs=108.7
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
++|||+|||+|.||.+++..|.+. | ++|.+|+|++++++++.. . +
T Consensus 2 ~~m~i~iiG~G~mG~~~a~~l~~~-g-----~~v~~~~~~~~~~~~~~~--------~--------------~------- 46 (259)
T 2ahr_A 2 NAMKIGIIGVGKMASAIIKGLKQT-P-----HELIISGSSLERSKEIAE--------Q--------------L------- 46 (259)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTS-S-----CEEEEECSSHHHHHHHHH--------H--------------H-------
T ss_pred CccEEEEECCCHHHHHHHHHHHhC-C-----CeEEEECCCHHHHHHHHH--------H--------------c-------
Confidence 468999999999999999999988 7 899999999876543210 0 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCc
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~ 201 (333)
.+...++++++++++|+||+++|++.+.+++.++. + ++++|+.++|+.
T Consensus 47 -------------------------g~~~~~~~~~~~~~~D~Vi~~v~~~~~~~v~~~l~----~---~~~vv~~~~~~~ 94 (259)
T 2ahr_A 47 -------------------------ALPYAMSHQDLIDQVDLVILGIKPQLFETVLKPLH----F---KQPIISMAAGIS 94 (259)
T ss_dssp -------------------------TCCBCSSHHHHHHTCSEEEECSCGGGHHHHHTTSC----C---CSCEEECCTTCC
T ss_pred -------------------------CCEeeCCHHHHHhcCCEEEEEeCcHhHHHHHHHhc----c---CCEEEEeCCCCC
Confidence 12234677788889999999999999988887753 3 678888888877
Q ss_pred ccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhccCceeEEEeC--ChhhHHHHHHHhCCCCeEEEecCC
Q 019978 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICG--AEKWRKPLAKFLRRPHFTVWDNGD 276 (333)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~~~~~~~~~~~--~~~~~~~l~~ll~~~~~~v~~s~D 276 (333)
.+ .+++.++.. .++ +...|+++..+.++ ...++.+. +++..+.++++|+..+..++..++
T Consensus 95 ~~------------~l~~~~~~~-~~~-v~~~p~~~~~~~~g-~~~i~~~~~~~~~~~~~~~~ll~~~G~~~~~~~~ 156 (259)
T 2ahr_A 95 LQ------------RLATFVGQD-LPL-LRIMPNMNAQILQS-STALTGNALVSQELQARVRDLTDSFGSTFDISEK 156 (259)
T ss_dssp HH------------HHHHHHCTT-SCE-EEEECCGGGGGTCE-EEEEEECTTCCHHHHHHHHHHHHTTEEEEECCGG
T ss_pred HH------------HHHHhcCCC-CCE-EEEcCCchHHHcCc-eEEEEcCCCCCHHHHHHHHHHHHhCCCEEEecHH
Confidence 53 356666532 223 34678888776666 22223333 567889999999998854444443
No 67
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.46 E-value=3.3e-13 Score=135.68 Aligned_cols=158 Identities=14% Similarity=0.106 Sum_probs=106.6
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
.+|+|+|||+|.||++||..|+++ | ++|++|+|++++++++..++ ..+
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~-G-----~~V~v~dr~~~~~~~l~~~g---------------------~~g----- 50 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDH-G-----FVVCAFNRTVSKVDDFLANE---------------------AKG----- 50 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSTHHHHHHHHTT---------------------TTT-----
T ss_pred CCCEEEEEChhHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHHhcc---------------------cCC-----
Confidence 358999999999999999999999 8 99999999998765432110 000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc---CCCEEEEecCch-hHHHHHHHHHhhhhccCCCCEEEEee
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW---DADIVINGLPST-ETKEVFEEISRYWKERITVPVIISLA 197 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~---~aDlIIlaVps~-~~~~vl~~i~~~l~~~~~~~~Ivs~~ 197 (333)
..+..+++++++++ ++|+||++||+. .++++++++.+++++ +++||.++
T Consensus 51 ------------------------~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~vl~~l~~~L~~---g~iIId~s 103 (484)
T 4gwg_A 51 ------------------------TKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVDDFIEKLVPLLDT---GDIIIDGG 103 (484)
T ss_dssp ------------------------SSCEECSSHHHHHHTBCSSCEEEECSCSSHHHHHHHHHHGGGCCT---TCEEEECS
T ss_pred ------------------------CceeccCCHHHHHhhccCCCEEEEecCChHHHHHHHHHHHHhcCC---CCEEEEcC
Confidence 13455677888776 599999999994 899999999999887 78899888
Q ss_pred ecCcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhccCceeEEEeCChhhHHHHHHHhCCCCeE
Q 019978 198 KGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFT 270 (333)
Q Consensus 198 kGi~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~ 270 (333)
++....+ ....+.+.+ .|.......+..||..+. .+ + .++++++++..+.++.+|+..+-+
T Consensus 104 t~~~~~t------~~~~~~l~~-~Gi~fvd~pVsGg~~gA~---~G-~-~im~GG~~ea~~~v~pll~~ig~~ 164 (484)
T 4gwg_A 104 NSEYRDT------TRRCRDLKA-KGILFVGSGVSGGEEGAR---YG-P-SLMPGGNKEAWPHIKTIFQGIAAK 164 (484)
T ss_dssp CCCHHHH------HHHHHHHHH-TTCEEEEEEEESHHHHHH---HC-C-EEEEEECGGGHHHHHHHHHHHSCB
T ss_pred CCCchHH------HHHHHHHHh-hccccccCCccCCHHHHh---cC-C-eeecCCCHHHHHHHHHHHHHhcCc
Confidence 7766432 111222222 132111122334443332 23 3 345667778888888888764443
No 68
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.42 E-value=1.3e-12 Score=122.74 Aligned_cols=183 Identities=14% Similarity=0.148 Sum_probs=110.7
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
.++||+|||+|.||+++|..|+++ | ++|++|+++++++++... . +.+. ++++..... +.....
T Consensus 14 ~~~~I~VIG~G~mG~~iA~~la~~-G-----~~V~~~d~~~~~~~~~~~-~----i~~~---l~~~~~~g~-~~~~~~-- 76 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGAGIAQVAAAT-G-----HTVVLVDQTEDILAKSKK-G----IEES---LRKVAKKKF-AENPKA-- 76 (302)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHH-H----HHHH---HHHHHHTTS-SSCHHH--
T ss_pred cCCEEEEECCCHHHHHHHHHHHhC-C-----CeEEEEECCHHHHHHHHH-H----HHHH---HHHHHHcCC-CCcccc--
Confidence 467999999999999999999999 8 999999999887664321 1 1110 000000000 000000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh--HHHHHHHHHhhhhccCCCCEEEEeeec
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE--TKEVFEEISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~--~~~vl~~i~~~l~~~~~~~~Ivs~~kG 199 (333)
..+..++ ...++.+++|+++++++||+||+|||++. .+++++++.+++++ +++|++.++|
T Consensus 77 --~~~~~~~-------------~~~~i~~~~~~~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~---~~iv~s~ts~ 138 (302)
T 1f0y_A 77 --GDEFVEK-------------TLSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAE---HTIFASNTSS 138 (302)
T ss_dssp --HHHHHHH-------------HHHTEEEESCHHHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCT---TCEEEECCSS
T ss_pred --chhhHHH-------------HHhceEEecCHHHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCC---CeEEEECCCC
Confidence 0000000 00157788999888999999999999864 67889999988876 7888888888
Q ss_pred CcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhccCceeEEEeC---ChhhHHHHHHHhCCCCeEEEecCC
Q 019978 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICG---AEKWRKPLAKFLRRPHFTVWDNGD 276 (333)
Q Consensus 200 i~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~~~~~~~~~~~---~~~~~~~l~~ll~~~~~~v~~s~D 276 (333)
+... + +.+.++.+ ..+ +-..|..+... . +...++.+ +++..+.+.++|...+..+....|
T Consensus 139 i~~~-----------~-l~~~~~~~-~~~-~g~h~~~P~~~--~-~~~~i~~g~~~~~e~~~~~~~l~~~~G~~~v~~~~ 201 (302)
T 1f0y_A 139 LQIT-----------S-IANATTRQ-DRF-AGLHFFNPVPV--M-KLVEVIKTPMTSQKTFESLVDFSKALGKHPVSCKD 201 (302)
T ss_dssp SCHH-----------H-HHTTSSCG-GGE-EEEEECSSTTT--C-CEEEEECCTTCCHHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCHH-----------H-HHHhcCCc-ccE-EEEecCCCccc--C-ceEEEeCCCCCCHHHHHHHHHHHHHcCCceEEecC
Confidence 7754 2 44444322 112 11222222111 1 22223322 567888888888877766555445
No 69
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.42 E-value=1.4e-12 Score=123.45 Aligned_cols=181 Identities=17% Similarity=0.200 Sum_probs=118.6
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
.|+||++||.|.||..||..|.++ | |+|++|+|++++++++..
T Consensus 2 ~M~kIgfIGlG~MG~~mA~~L~~~-G-----~~v~v~dr~~~~~~~l~~------------------------------- 44 (300)
T 3obb_A 2 HMKQIAFIGLGHMGAPMATNLLKA-G-----YLLNVFDLVQSAVDGLVA------------------------------- 44 (300)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHT-T-----CEEEEECSSHHHHHHHHH-------------------------------
T ss_pred CcCEEEEeeehHHHHHHHHHHHhC-C-----CeEEEEcCCHHHHHHHHH-------------------------------
Confidence 577999999999999999999999 8 999999999876543210
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHHHH---HHhhhhccCCCCEEEEee
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVFEE---ISRYWKERITVPVIISLA 197 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-~~~~vl~~---i~~~l~~~~~~~~Ivs~~ 197 (333)
......+++.++++++|+||.|+|.. .+++++.. +.+.+.+ ++++|.++
T Consensus 45 ------------------------~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~~~~~~~---g~iiId~s 97 (300)
T 3obb_A 45 ------------------------AGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAP---GTLVLECS 97 (300)
T ss_dssp ------------------------TTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSSTTSCCC----CEEEECS
T ss_pred ------------------------cCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhhhhcCCC---CCEEEECC
Confidence 02455678899999999999999975 68888765 3444454 67787765
Q ss_pred ecCcccccCCccCCCHHHHHHhHh---CCCCCcEEEEcCCCchHHHhccCceeEEEeCChhhHHHHHHHhCCCCeEEEec
Q 019978 198 KGVEAELEAVPRIITPTQMINRAT---GVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDN 274 (333)
Q Consensus 198 kGi~~~~~~~~~~~~~se~i~~~l---g~~~~~~~vl~GP~~a~ev~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~s 274 (333)
.. .+++ +..+.+.+ |.......|..||..|. .|..+ ++++++++..++++.+|+..+-++++.
T Consensus 98 T~-~p~~---------~~~~a~~~~~~G~~~lDaPVsGg~~~A~---~G~L~-imvGG~~~~~~~~~p~l~~~g~~i~~~ 163 (300)
T 3obb_A 98 TI-APTS---------ARKIHAAARERGLAMLDAPVSGGTAGAA---AGTLT-FMVGGDAEALEKARPLFEAMGRNIFHA 163 (300)
T ss_dssp CC-CHHH---------HHHHHHHHHTTTCEEEECCEESCHHHHH---HTCEE-EEEESCHHHHHHHHHHHHHHEEEEEEE
T ss_pred CC-CHHH---------HHHHHHHHHHcCCEEEecCCCCCHHHHH---hCCEE-EEEeCCHHHHHHHHHHHHHhCCCEEEe
Confidence 33 3321 12233333 21111112344444432 33223 356888888999999998877777766
Q ss_pred CChhHHHHHHHHHHHHHH--HHHHHhcc
Q 019978 275 GDLVTHEVMGGLKNVYAI--GAGMVAAL 300 (333)
Q Consensus 275 ~Di~gve~~~alkNv~Ai--~~Gi~~gl 300 (333)
.+.=.-...+...|.+.. ..++++++
T Consensus 164 G~~G~g~~~Kl~~N~l~~~~~~a~aEa~ 191 (300)
T 3obb_A 164 GPDGAGQVAKVCNNQLLAVLMIGTAEAM 191 (300)
T ss_dssp ESTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666445677777776332 24444444
No 70
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.42 E-value=4.5e-13 Score=124.87 Aligned_cols=153 Identities=16% Similarity=0.142 Sum_probs=107.7
Q ss_pred CceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 43 ~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
+|||+|||+ |.||+++|..|++. | ++|++|+|++++++++.. .
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~-g-----~~V~~~~r~~~~~~~~~~------------------------~------ 54 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDS-A-----HHLAAIEIAPEGRDRLQG------------------------M------ 54 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHS-S-----SEEEEECCSHHHHHHHHH------------------------T------
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC-C-----CEEEEEECCHHHHHHHHh------------------------c------
Confidence 479999999 99999999999998 8 899999999865432110 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCc
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~ 201 (333)
.+.. +++.++++++|+||+|||++.+.++++++.+++++ +++|+++++|.+
T Consensus 55 -------------------------g~~~-~~~~~~~~~aDvVi~av~~~~~~~v~~~l~~~l~~---~~ivv~~s~~~~ 105 (286)
T 3c24_A 55 -------------------------GIPL-TDGDGWIDEADVVVLALPDNIIEKVAEDIVPRVRP---GTIVLILDAAAP 105 (286)
T ss_dssp -------------------------TCCC-CCSSGGGGTCSEEEECSCHHHHHHHHHHHGGGSCT---TCEEEESCSHHH
T ss_pred -------------------------CCCc-CCHHHHhcCCCEEEEcCCchHHHHHHHHHHHhCCC---CCEEEECCCCch
Confidence 0111 13446678999999999999999999999988876 788999888875
Q ss_pred ccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHH--------HhccCce-------eEE-EeCChhhHHHHHHHhC
Q 019978 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASE--------IYNKEYA-------NAR-ICGAEKWRKPLAKFLR 265 (333)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~e--------v~~~~~~-------~~~-~~~~~~~~~~l~~ll~ 265 (333)
... +++..+ .. ..+...|.++.+ +..+.++ ..+ ...+++..+.++++|+
T Consensus 106 ~~~------------l~~~~~--~~-~~v~~~P~~~~~~~~~~~~~~~~g~l~~~~~~~~i~~~~~~~~~~~~~v~~l~~ 170 (286)
T 3c24_A 106 YAG------------VMPERA--DI-TYFIGHPCHPPLFNDETDPAARTDYHGGIAKQAIVCALMQGPEEHYAIGADICE 170 (286)
T ss_dssp HHT------------CSCCCT--TS-EEEEEEECCSCSSCCCCSHHHHTCSSSSSSCEEEEEEEEESCTHHHHHHHHHHH
T ss_pred hHH------------HHhhhC--CC-eEEecCCCCccccccccchhhccCcccccccceeeeeccCCCHHHHHHHHHHHH
Confidence 431 222111 11 223366777544 6666432 212 2456678999999999
Q ss_pred CCCe---EEEecC
Q 019978 266 RPHF---TVWDNG 275 (333)
Q Consensus 266 ~~~~---~v~~s~ 275 (333)
..+. +++..+
T Consensus 171 ~~G~~~~~~~~v~ 183 (286)
T 3c24_A 171 TMWSPVTRTHRVT 183 (286)
T ss_dssp HHTCSEEEEEECC
T ss_pred HhcCCcceEEEeC
Confidence 8888 665544
No 71
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.41 E-value=7.5e-12 Score=114.75 Aligned_cols=161 Identities=14% Similarity=0.171 Sum_probs=101.3
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEec--CCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRR--PGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r--~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
|||+|||+|+||+++|..|++. | ++|++|+| +++.++++. +
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~-g-----~~V~~~~~~~~~~~~~~~~---------~---------------------- 43 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSR-G-----VEVVTSLEGRSPSTIERAR---------T---------------------- 43 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-T-----CEEEECCTTCCHHHHHHHH---------H----------------------
T ss_pred CeEEEEechHHHHHHHHHHHHC-C-----CeEEEeCCccCHHHHHHHH---------H----------------------
Confidence 6999999999999999999998 8 99999987 332222110 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCc
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~ 201 (333)
. .+. ++++++++++|+||++||++...+.+.++.+.++ + +++++ +++.
T Consensus 44 ------------~------------g~~--~~~~~~~~~aDvvi~~v~~~~~~~~~~~~~~~~~----~-~vi~~-s~~~ 91 (264)
T 1i36_A 44 ------------V------------GVT--ETSEEDVYSCPVVISAVTPGVALGAARRAGRHVR----G-IYVDI-NNIS 91 (264)
T ss_dssp ------------H------------TCE--ECCHHHHHTSSEEEECSCGGGHHHHHHHHHTTCC----S-EEEEC-SCCC
T ss_pred ------------C------------CCc--CCHHHHHhcCCEEEEECCCHHHHHHHHHHHHhcC----c-EEEEc-cCCC
Confidence 0 122 4566778899999999999865555666665543 4 56655 4554
Q ss_pred ccccCCccCCCHHHHHHhHhCCCC-CcEEEEcCCCchHHHhccCceeEEEeCChhhHHHHHHHhCCCCeEEEe-cCChhH
Q 019978 202 AELEAVPRIITPTQMINRATGVPI-ENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWD-NGDLVT 279 (333)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~-~~~~vl~GP~~a~ev~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~-s~Di~g 279 (333)
+.+ .+.+.+.++... ....+..+|..+ ..+.+ ++.+++.. +.+++ |+..+.++.. .+++-.
T Consensus 92 ~~~---------~~~l~~~~~~~g~~~~~v~~~~~~~---~~g~~--~~~~g~~~--~~~~~-l~~~g~~~~~~~~~~g~ 154 (264)
T 1i36_A 92 PET---------VRMASSLIEKGGFVDAAIMGSVRRK---GADIR--IIASGRDA--EEFMK-LNRYGLNIEVRGREPGD 154 (264)
T ss_dssp HHH---------HHHHHHHCSSSEEEEEEECSCHHHH---GGGCE--EEEESTTH--HHHHG-GGGGTCEEEECSSSTTH
T ss_pred HHH---------HHHHHHHHhhCCeeeeeeeCCcccc---ccCCe--EEecCCcH--HHhhh-HHHcCCeeEECCCCcCH
Confidence 431 134556564211 012233444322 23433 34444433 78888 9988887655 444666
Q ss_pred HHHHHHHHHHH
Q 019978 280 HEVMGGLKNVY 290 (333)
Q Consensus 280 ve~~~alkNv~ 290 (333)
..|.+..-|.+
T Consensus 155 ~~~~kl~~n~~ 165 (264)
T 1i36_A 155 ASAIKMLRSSY 165 (264)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 78888777764
No 72
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.40 E-value=2.1e-12 Score=115.96 Aligned_cols=167 Identities=11% Similarity=0.096 Sum_probs=112.4
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
.+|||+|||+|.||++++..|++. | ++|++|+|++++++++. .
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~-g-----~~V~~~~r~~~~~~~~~-------------------------~------ 69 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGS-G-----FKVVVGSRNPKRTARLF-------------------------P------ 69 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESSHHHHHHHS-------------------------B------
T ss_pred CCCEEEEEccCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHH-------------------------H------
Confidence 358999999999999999999998 8 89999999876543210 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCc
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~ 201 (333)
..+..+ +++++++++|+||+++|++.++++++ +.+++ + +++++++++|+.
T Consensus 70 ------------------------~g~~~~-~~~~~~~~~DvVi~av~~~~~~~v~~-l~~~~-~---~~~vv~~s~g~~ 119 (215)
T 2vns_A 70 ------------------------SAAQVT-FQEEAVSSPEVIFVAVFREHYSSLCS-LSDQL-A---GKILVDVSNPTE 119 (215)
T ss_dssp ------------------------TTSEEE-EHHHHTTSCSEEEECSCGGGSGGGGG-GHHHH-T---TCEEEECCCCCH
T ss_pred ------------------------cCCcee-cHHHHHhCCCEEEECCChHHHHHHHH-HHHhc-C---CCEEEEeCCCcc
Confidence 012333 67778889999999999988878775 66665 4 689999999987
Q ss_pred ccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchH----HHhccCceeEEEeCChhhHHHHHHHhCCCCeEEEecCCh
Q 019978 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIAS----EIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDL 277 (333)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~----ev~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~s~Di 277 (333)
.... .......+++.+.++. .++.-...+-.+. .+..+.+...+.+.+++..+.++++|+..|++++...++
T Consensus 120 ~~~l--~~~~~~~~~l~~~l~~--~~vv~~~n~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~~ll~~~G~~~~~~g~~ 195 (215)
T 2vns_A 120 QEHL--QHRESNAEYLASLFPT--CTVVKAFNVISAWTLQAGPRDGNRQVPICGDQPEAKRAVSEMALAMGFMPVDMGSL 195 (215)
T ss_dssp HHHH--HCSSCHHHHHHHHCTT--SEEEEECTTBCHHHHHTCSCSSCCEEEEEESCHHHHHHHHHHHHHTTCEEEECCSG
T ss_pred cccc--cccccHHHHHHHHCCC--CeEEeccccccHhHhcccccCCceeEEEecCCHHHHHHHHHHHHHcCCceEeecch
Confidence 6421 0113456777777752 2221111111111 111222222334557788999999999999999888886
Q ss_pred hH
Q 019978 278 VT 279 (333)
Q Consensus 278 ~g 279 (333)
-.
T Consensus 196 ~~ 197 (215)
T 2vns_A 196 AS 197 (215)
T ss_dssp GG
T ss_pred hh
Confidence 43
No 73
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.39 E-value=3.9e-12 Score=118.75 Aligned_cols=181 Identities=13% Similarity=0.135 Sum_probs=112.7
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcc-cccchhhhhh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRC-AYLKYVEARL 121 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~-~~l~~~~~~~ 121 (333)
++||+|||+|.||+++|..|+.+ | ++|++|+++++.++++... +... +.++.... .....
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~-G-----~~V~l~d~~~~~~~~~~~~-----i~~~---~~~~~~~g~~~~~~----- 64 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFH-G-----FAVTAYDINTDALDAAKKR-----FEGL---AAVYEKEVAGAADG----- 64 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSHHHHHHHHHH-----HHHH---HHHHHHHSTTCTTT-----
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CeEEEEeCCHHHHHHHHHH-----HHHH---HHHHHHhcccCCHH-----
Confidence 57999999999999999999999 8 9999999999876654321 1110 01100000 00000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch--hHHHHHHHHHhhhhccCCCCEEEEeeec
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST--ETKEVFEEISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~--~~~~vl~~i~~~l~~~~~~~~Ivs~~kG 199 (333)
. .++. +.++..++++++++++||+||+++|++ ...++++++.+++++ ++++++.+++
T Consensus 65 ---~--~~~~-------------~~~i~~~~~~~~~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~---~~il~s~tS~ 123 (283)
T 4e12_A 65 ---A--AQKA-------------LGGIRYSDDLAQAVKDADLVIEAVPESLDLKRDIYTKLGELAPA---KTIFATNSST 123 (283)
T ss_dssp ---H--HHHH-------------HHHCEEESCHHHHTTTCSEEEECCCSCHHHHHHHHHHHHHHSCT---TCEEEECCSS
T ss_pred ---H--HHHH-------------HcCeEEeCCHHHHhccCCEEEEeccCcHHHHHHHHHHHHhhCCC---CcEEEECCCC
Confidence 0 0000 014677899998899999999999998 889999999998887 7888888877
Q ss_pred CcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhccCceeEEEe--CChhhHHHHHHHhCCCCeEEEec-CC
Q 019978 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDN-GD 276 (333)
Q Consensus 200 i~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~~~~~~~~~~--~~~~~~~~l~~ll~~~~~~v~~s-~D 276 (333)
+... + +.+.++.+ ..+. -..|..+. .......++.. .+++..+.+..++...+..+... .|
T Consensus 124 ~~~~-----------~-la~~~~~~-~~~i-g~h~~~p~--~~~~lvevv~~~~t~~~~~~~~~~l~~~~g~~~v~v~~~ 187 (283)
T 4e12_A 124 LLPS-----------D-LVGYTGRG-DKFL-ALHFANHV--WVNNTAEVMGTTKTDPEVYQQVVEFASAIGMVPIELKKE 187 (283)
T ss_dssp SCHH-----------H-HHHHHSCG-GGEE-EEEECSST--TTSCEEEEEECTTSCHHHHHHHHHHHHHTTCEEEECSSC
T ss_pred CCHH-----------H-HHhhcCCC-cceE-EEccCCCc--ccCceEEEEeCCCCCHHHHHHHHHHHHHcCCEEEEEecC
Confidence 6543 2 45555432 1221 11122111 11212222222 25677888889998877655543 55
Q ss_pred hhH
Q 019978 277 LVT 279 (333)
Q Consensus 277 i~g 279 (333)
.-|
T Consensus 188 ~~g 190 (283)
T 4e12_A 188 KAG 190 (283)
T ss_dssp CTT
T ss_pred CCC
Confidence 444
No 74
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.38 E-value=3.8e-12 Score=120.22 Aligned_cols=170 Identities=21% Similarity=0.280 Sum_probs=106.8
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
+||+|||.|.||..||..|+++ | |+|++|+|++++++++..
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~-G-----~~V~v~dr~~~~~~~l~~--------------------------------- 46 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA-G-----YELVVWNRTASKAEPLTK--------------------------------- 46 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-T-----CEEEEC-------CTTTT---------------------------------
T ss_pred CcEEEEecHHHHHHHHHHHHHC-C-----CeEEEEeCCHHHHHHHHH---------------------------------
Confidence 3899999999999999999999 8 999999999986643210
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHhhhhccCCCCEEEEeeecCc
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGVE 201 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-~~~~vl-~~i~~~l~~~~~~~~Ivs~~kGi~ 201 (333)
......+++.++++.+|+||+++|.. .+++++ ..+.+.+++ ++++|.++. +.
T Consensus 47 ----------------------~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~~~~~---~~iiid~sT-~~ 100 (297)
T 4gbj_A 47 ----------------------LGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVEKLGK---DGVHVSMST-IS 100 (297)
T ss_dssp ----------------------TTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHHHHCT---TCEEEECSC-CC
T ss_pred ----------------------cCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHhhcCC---CeEEEECCC-CC
Confidence 13455678888999999999999976 455554 556666666 677776653 33
Q ss_pred ccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHH--hccCceeEEEeCChhhHHHHHHHhCCCCeEEEecCC-hh
Q 019978 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEI--YNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGD-LV 278 (333)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev--~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~s~D-i~ 278 (333)
+++ ++.+.+.+.. ..+.++-.|...... ..+ ...++++++++..++++.+|+..+-+++...+ +=
T Consensus 101 p~~---------~~~~~~~~~~--~g~~~ldapVsGg~~~a~~g-~l~im~gG~~~~~~~~~~~l~~~g~~i~~~g~~~G 168 (297)
T 4gbj_A 101 PET---------SRQLAQVHEW--YGAHYVGAPIFARPEAVRAK-VGNICLSGNAGAKERIKPIVENFVKGVFDFGDDPG 168 (297)
T ss_dssp HHH---------HHHHHHHHHH--TTCEEEECCEECCHHHHHHT-CCEEEEEECHHHHHHHHHHHHTTCSEEEECCSCTT
T ss_pred hHH---------HHHHHHHHHh--cCCceecCCcCCCccccccc-cceeecccchhHHHHHHHHHHHhhCCeEEecCCcc
Confidence 331 1223332211 112344444443221 223 22245677888899999999998888776654 44
Q ss_pred HHHHHHHHHHHH
Q 019978 279 THEVMGGLKNVY 290 (333)
Q Consensus 279 gve~~~alkNv~ 290 (333)
..+..+...|.+
T Consensus 169 ~g~~~Kl~~N~~ 180 (297)
T 4gbj_A 169 AANVIKLAGNFM 180 (297)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 456777777763
No 75
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.38 E-value=5.6e-12 Score=118.63 Aligned_cols=154 Identities=21% Similarity=0.201 Sum_probs=103.0
Q ss_pred CceEEEEC-CCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 43 PLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 43 ~~kI~IIG-aG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
++||+||| +|.||+++|..|++. | ++|++|+|+++.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~-G-----~~V~~~~~~~~~------------------------------------- 57 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRAS-G-----YPISILDREDWA------------------------------------- 57 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTT-T-----CCEEEECTTCGG-------------------------------------
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhC-C-----CeEEEEECCccc-------------------------------------
Confidence 35999999 999999999999998 8 899999887531
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCc
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~ 201 (333)
+..+++.++|+||+|||++.+.++++++.+++++ +++|+.+ .|+.
T Consensus 58 -------------------------------~~~~~~~~aDvVilavp~~~~~~vl~~l~~~l~~---~~iv~~~-~svk 102 (298)
T 2pv7_A 58 -------------------------------VAESILANADVVIVSVPINLTLETIERLKPYLTE---NMLLADL-TSVK 102 (298)
T ss_dssp -------------------------------GHHHHHTTCSEEEECSCGGGHHHHHHHHGGGCCT---TSEEEEC-CSCC
T ss_pred -------------------------------CHHHHhcCCCEEEEeCCHHHHHHHHHHHHhhcCC---CcEEEEC-CCCC
Confidence 1234577899999999999999999999998876 6655544 3433
Q ss_pred ccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhccCceeEEEeCChhhHHHHHHHhCCCCeEEEecCChhHHH
Q 019978 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVTHE 281 (333)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~s~Di~gve 281 (333)
.. +.+.+.+.++....+..-+.||.. +...+.++..+...+++..+.++++|+..|.+++..++....+
T Consensus 103 ~~---------~~~~~~~~~~~~~v~~hP~~g~~~--~~~~g~~~~l~~~~~~~~~~~v~~l~~~~G~~~~~~~~~~~d~ 171 (298)
T 2pv7_A 103 RE---------PLAKMLEVHTGAVLGLHPMFGADI--ASMAKQVVVRCDGRFPERYEWLLEQIQIWGAKIYQTNATEHDH 171 (298)
T ss_dssp HH---------HHHHHHHHCSSEEEEEEECSCTTC--SCCTTCEEEEEEEECGGGTHHHHHHHHHTTCEEEECCHHHHHH
T ss_pred cH---------HHHHHHHhcCCCEEeeCCCCCCCc--hhhcCCeEEEecCCCHHHHHHHHHHHHHcCCEEEECCHHHHHH
Confidence 21 112233333311001112345554 2234443333333356788999999999999888776555455
Q ss_pred HHHH
Q 019978 282 VMGG 285 (333)
Q Consensus 282 ~~~a 285 (333)
+.+.
T Consensus 172 ~~a~ 175 (298)
T 2pv7_A 172 NMTY 175 (298)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 76
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.36 E-value=6.1e-12 Score=118.81 Aligned_cols=157 Identities=15% Similarity=0.169 Sum_probs=100.5
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
.+|||+|||+|.||.++|..|++. | ++|++|+|++++++++..
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~-G-----~~V~~~dr~~~~~~~~~~------------------------------- 50 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQ-G-----KRVAIWNRSPGKAAALVA------------------------------- 50 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSHHHHHHHHH-------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHHH-------------------------------
Confidence 458999999999999999999999 8 999999999876543210
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHHH--HHHhhhhccCCCCEEEEeee
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVFE--EISRYWKERITVPVIISLAK 198 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-~~~~vl~--~i~~~l~~~~~~~~Ivs~~k 198 (333)
..+...++++++++++|+||+++|.. .+++++. .+... .+ +++||.++.
T Consensus 51 ------------------------~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~~l~~~-~~---g~ivid~st 102 (306)
T 3l6d_A 51 ------------------------AGAHLCESVKAALSASPATIFVLLDNHATHEVLGMPGVARA-LA---HRTIVDYTT 102 (306)
T ss_dssp ------------------------HTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHTSTTHHHH-TT---TCEEEECCC
T ss_pred ------------------------CCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhcccchhhc-cC---CCEEEECCC
Confidence 02345578888899999999999976 5888886 66553 44 677877654
Q ss_pred cCcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhccCceeEEEeCChhhHHHHHHHhCCCCeEEEec
Q 019978 199 GVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDN 274 (333)
Q Consensus 199 Gi~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~s 274 (333)
. .+.. .+.+.+.+.+ .|.......+..+|..+ ..+. ..++++++++..+.++.+|+..+-++.+.
T Consensus 103 ~-~~~~-----~~~l~~~~~~-~g~~~vdapv~g~~~~~---~~~~-~~i~~gg~~~~~~~~~~ll~~lg~~~~~~ 167 (306)
T 3l6d_A 103 N-AQDE-----GLALQGLVNQ-AGGHYVKGMIVAYPRNV---GHRE-SHSIHTGDREAFEQHRALLEGLAGHTVFL 167 (306)
T ss_dssp C-CTTH-----HHHHHHHHHH-TTCEEEEEEEESCGGGT---TCTT-CEEEEEECHHHHHHHHHHHHTTCSEEEEC
T ss_pred C-CHHH-----HHHHHHHHHH-cCCeEEecccccCcccc---cCCc-eEEEEcCCHHHHHHHHHHHHHhcCCEEEe
Confidence 3 3321 1122222222 22111111233333222 1222 23345667788999999999874466544
No 77
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=99.34 E-value=2.9e-12 Score=122.41 Aligned_cols=126 Identities=21% Similarity=0.295 Sum_probs=88.3
Q ss_pred CCCCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhh
Q 019978 39 AEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (333)
Q Consensus 39 ~~~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~ 118 (333)
++....||+|||+|.||+.+|..++.+ | ++|++||++++.+++... .+... +.++..... ++.
T Consensus 2 a~p~~~~VaViGaG~MG~giA~~~a~~-G-----~~V~l~D~~~~~l~~~~~-----~i~~~---l~~~~~~g~-~~~-- 64 (319)
T 3ado_A 2 ASPAAGDVLIVGSGLVGRSWAMLFASG-G-----FRVKLYDIEPRQITGALE-----NIRKE---MKSLQQSGS-LKG-- 64 (319)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSCHHHHHHHHH-----HHHHH---HHHHHHTTC-CCS--
T ss_pred CCCCCCeEEEECCcHHHHHHHHHHHhC-C-----CeEEEEECCHHHHHHHHH-----HHHHH---HHHHHHcCC-CCC--
Confidence 344567999999999999999999999 8 999999999876654221 11111 111111110 110
Q ss_pred hhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch--hHHHHHHHHHhhhhccCCCCEEEEe
Q 019978 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST--ETKEVFEEISRYWKERITVPVIISL 196 (333)
Q Consensus 119 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~--~~~~vl~~i~~~l~~~~~~~~Ivs~ 196 (333)
.+.+++. +.++..++|+++++++||+||.|||.. ...+++++|.+++++ ++++.|.
T Consensus 65 ------~~~~~~~-------------l~~i~~~~~l~~a~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~---~aIlaSN 122 (319)
T 3ado_A 65 ------SLSAEEQ-------------LSLISSCTNLAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDD---RVVLSSS 122 (319)
T ss_dssp ------SSCHHHH-------------HHTEEEECCHHHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCS---SSEEEEC
T ss_pred ------ccCHHHH-------------HhhcccccchHhHhccCcEEeeccccHHHHHHHHHHHHHHHhhh---cceeehh
Confidence 1111111 126888999999999999999999986 689999999999988 8999899
Q ss_pred eecCccc
Q 019978 197 AKGVEAE 203 (333)
Q Consensus 197 ~kGi~~~ 203 (333)
|.++...
T Consensus 123 TSsl~is 129 (319)
T 3ado_A 123 SSCLLPS 129 (319)
T ss_dssp CSSCCHH
T ss_pred hhhccch
Confidence 9888875
No 78
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=99.01 E-value=1.1e-13 Score=123.79 Aligned_cols=161 Identities=13% Similarity=0.101 Sum_probs=108.0
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
|||+|||+|+||+++|..|.+. | ++|++|+|+++ .+.+. .
T Consensus 20 ~~I~iIG~G~mG~~la~~L~~~-G-----~~V~~~~r~~~-~~~~~-------------------------~-------- 59 (201)
T 2yjz_A 20 GVVCIFGTGDFGKSLGLKMLQC-G-----YSVVFGSRNPQ-VSSLL-------------------------P-------- 59 (201)
Confidence 6899999999999999999998 8 89999999875 32110 0
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCccc
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEAE 203 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~~~ 203 (333)
..+.+. +++++++++|+||++||++.+++++ ++.+.. + +++||++++|+...
T Consensus 60 ----------------------~g~~~~-~~~~~~~~aDvVilav~~~~~~~v~-~l~~~~-~---~~ivI~~~~G~~~~ 111 (201)
T 2yjz_A 60 ----------------------RGAEVL-CYSEAASRSDVIVLAVHREHYDFLA-ELADSL-K---GRVLIDVSNNQKMN 111 (201)
Confidence 012223 4556778999999999999888887 565533 3 67899999999632
Q ss_pred ccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhc-cCc----eeEEEeCChhhHHHHHHHhCCCCeEEEecCChh
Q 019978 204 LEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYN-KEY----ANARICGAEKWRKPLAKFLRRPHFTVWDNGDLV 278 (333)
Q Consensus 204 ~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~-~~~----~~~~~~~~~~~~~~l~~ll~~~~~~v~~s~Di~ 278 (333)
.. ...-.+.+++.++.. ..+...|+++..... +.. +..+.+++++..+.++.+|+..|+++....++-
T Consensus 112 ~~----~~~~~~~l~~~~~~~---~vvra~~n~~a~~~~~g~l~g~~~~~~~g~~~~~~~~v~~ll~~~G~~~~~~G~l~ 184 (201)
T 2yjz_A 112 QY----PESNAEYLAQLVPGA---HVVKAFNTISAWALQSGTLDASRQVFVCGNDSKAKDRVMDIARTLGLTPLDQGSLV 184 (201)
Confidence 10 000113455555421 235566777665544 221 122334456678899999999999887766654
Q ss_pred H
Q 019978 279 T 279 (333)
Q Consensus 279 g 279 (333)
.
T Consensus 185 ~ 185 (201)
T 2yjz_A 185 A 185 (201)
Confidence 3
No 79
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.31 E-value=5.8e-13 Score=123.88 Aligned_cols=199 Identities=13% Similarity=0.047 Sum_probs=107.9
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeE-EEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
+|||+|||+|.||++++..|+++ ++| .+|+|++++++++. + .+
T Consensus 2 ~m~I~iIG~G~mG~~la~~l~~~-------~~v~~v~~~~~~~~~~~~---------~-------------~~------- 45 (276)
T 2i76_A 2 SLVLNFVGTGTLTRFFLECLKDR-------YEIGYILSRSIDRARNLA---------E-------------VY------- 45 (276)
T ss_dssp --CCEEESCCHHHHHHHHTTC-----------CCCEECSSHHHHHHHH---------H-------------HT-------
T ss_pred CceEEEEeCCHHHHHHHHHHHHc-------CcEEEEEeCCHHHHHHHH---------H-------------Hc-------
Confidence 37999999999999999998765 578 59999986554321 0 00
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCc
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~ 201 (333)
.. .+++++++++++|+||+|||++.+.++++++. .+ +++|++++.++.
T Consensus 46 -------------------------g~-~~~~~~~~~~~~DvVilav~~~~~~~v~~~l~---~~---~~ivi~~s~~~~ 93 (276)
T 2i76_A 46 -------------------------GG-KAATLEKHPELNGVVFVIVPDRYIKTVANHLN---LG---DAVLVHCSGFLS 93 (276)
T ss_dssp -------------------------CC-CCCSSCCCCC---CEEECSCTTTHHHHHTTTC---CS---SCCEEECCSSSC
T ss_pred -------------------------CC-ccCCHHHHHhcCCEEEEeCChHHHHHHHHHhc---cC---CCEEEECCCCCc
Confidence 11 23445556778999999999999999998875 33 678888876665
Q ss_pred ccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhccCceeEEEeCChhhHHHHHHHhCCCCeEEE-ecC-ChhH
Q 019978 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVW-DNG-DLVT 279 (333)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~-~s~-Di~g 279 (333)
.+. +++.+....++...++||....+...+.+. .++.+++..+.++.+|+..+.+++ ..+ |...
T Consensus 94 ~~~------------l~~~~~~~~~p~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~lG~~~~~v~~~~~~~ 159 (276)
T 2i76_A 94 SEI------------FKKSGRASIHPNFSFSSLEKALEMKDQIVF--GLEGDERGLPIVKKIAEEISGKYFVIPSEKKKA 159 (276)
T ss_dssp GGG------------GCSSSEEEEEECSCC--CTTGGGCGGGCCE--EECCCTTTHHHHHHHHHHHCSCEEECCGGGHHH
T ss_pred HHH------------HHHhhccccchhhhcCCCchhHHHhCCCeE--EEEeChHHHHHHHHHHHHhCCCEEEECHHHHHH
Confidence 431 222111001122223453333332233222 334455567777778777664443 332 3111
Q ss_pred -----HHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHH-HHCC
Q 019978 280 -----HEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVVM-HGMG 326 (333)
Q Consensus 280 -----ve~~~alkNv~Ai~~Gi~~gl~~~~~n~~~~l~~~~~~E~~~l-~~~G 326 (333)
.-.+..+.++++.+..++...+.. . ..+++...+.+.... ...|
T Consensus 160 ~~~~~~l~~n~~~~~~~~a~~~~~~~Gl~-~--~~a~~~~l~~~~~~~~~~~g 209 (276)
T 2i76_A 160 YHLAAVIASNFPVALAYLSKRIYTLLGLD-E--PELLIHTLMKGVADNIKKMR 209 (276)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHHTTTCS-C--HHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCC-h--HHHHHHHHHHHHHHHHHhcC
Confidence 223334566777776666655542 2 222355555555554 4554
No 80
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.29 E-value=2.8e-11 Score=116.11 Aligned_cols=180 Identities=17% Similarity=0.181 Sum_probs=117.1
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
|||+|||+|.||+++|..|.+. | ++|++|+|+++...+. ..+
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~-G-----~~V~~~~~~~~~~~~~--------a~~------------------------ 58 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDS-G-----VDVTVGLRSGSATVAK--------AEA------------------------ 58 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-T-----CCEEEECCTTCHHHHH--------HHH------------------------
T ss_pred CEEEEECchHHHHHHHHHHHHC-c-----CEEEEEECChHHHHHH--------HHH------------------------
Confidence 6999999999999999999998 8 8999999987542100 000
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHH-HHHhhhhccCCCCEEEEeeecCcc
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFE-EISRYWKERITVPVIISLAKGVEA 202 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~-~i~~~l~~~~~~~~Ivs~~kGi~~ 202 (333)
..+.++ ++++++.++|+||+|||++...++++ ++.+++++ +++|+++ +|+..
T Consensus 59 ----------------------~G~~~~-~~~e~~~~aDvVilavp~~~~~~v~~~~i~~~l~~---~~ivi~~-~gv~~ 111 (338)
T 1np3_A 59 ----------------------HGLKVA-DVKTAVAAADVVMILTPDEFQGRLYKEEIEPNLKK---GATLAFA-HGFSI 111 (338)
T ss_dssp ----------------------TTCEEE-CHHHHHHTCSEEEECSCHHHHHHHHHHHTGGGCCT---TCEEEES-CCHHH
T ss_pred ----------------------CCCEEc-cHHHHHhcCCEEEEeCCcHHHHHHHHHHHHhhCCC---CCEEEEc-CCchh
Confidence 023344 77788899999999999999999998 99988876 6777754 56543
Q ss_pred cccCCccCCCHHHHHHhHhCCCCCcEE--EEcCCCchH-HHhc---cCceeEEEe--CChhhHHHHHHHhCCCCe-E--E
Q 019978 203 ELEAVPRIITPTQMINRATGVPIENIL--YLGGPNIAS-EIYN---KEYANARIC--GAEKWRKPLAKFLRRPHF-T--V 271 (333)
Q Consensus 203 ~~~~~~~~~~~se~i~~~lg~~~~~~~--vl~GP~~a~-ev~~---~~~~~~~~~--~~~~~~~~l~~ll~~~~~-~--v 271 (333)
. +.+........+. .-.||.++. +... +.++.++.. .+.+..+.+..++...|. + +
T Consensus 112 -~------------~~~~~~~~~~~vv~~~P~gp~~a~~~l~~~G~g~~~ii~~~~~~~~~a~~~~~~l~~~lG~~~agv 178 (338)
T 1np3_A 112 -H------------YNQVVPRADLDVIMIAPKAPGHTVRSEFVKGGGIPDLIAIYQDASGNAKNVALSYACGVGGGRTGI 178 (338)
T ss_dssp -H------------TTSSCCCTTCEEEEEEESSCSHHHHHHHHTTCCCCEEEEEEECSSSCHHHHHHHHHHHTTHHHHCE
T ss_pred -H------------HHhhcCCCCcEEEeccCCCCchhHHHHHhccCCCeEEEEecCCCCHHHHHHHHHHHHHcCCCccce
Confidence 1 1221111111111 115677653 3443 666654442 344567778888877776 3 3
Q ss_pred Eec-------CChhHH--HHHHHHHHHHHHHHHHHhccC
Q 019978 272 WDN-------GDLVTH--EVMGGLKNVYAIGAGMVAALT 301 (333)
Q Consensus 272 ~~s-------~Di~gv--e~~~alkNv~Ai~~Gi~~gl~ 301 (333)
... .|..+. -+||.+.++++.+...+...+
T Consensus 179 ~~~~~~~~~~~~~~~s~~~l~G~lp~~ia~~~e~l~~~G 217 (338)
T 1np3_A 179 IETTFKDETETDLFGEQAVLCGGCVELVKAGFETLVEAG 217 (338)
T ss_dssp EECCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHTT
T ss_pred EeechhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHcC
Confidence 322 234553 388889999888764444333
No 81
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.28 E-value=5.2e-11 Score=118.92 Aligned_cols=177 Identities=11% Similarity=0.051 Sum_probs=111.3
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
.++||+|||+|.||+.||..|+++ | ++|++|++++++....-.+.+....+. . .+....
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~a-G-----~~V~l~D~~~e~a~~~i~~~l~~~~~~-----------G-~l~~~~--- 111 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLA-G-----IETFLVVRNEQRCKQELEVMYAREKSF-----------K-RLNDKR--- 111 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHHHHHHHHHHT-----------T-SCCHHH---
T ss_pred cCCEEEEECCCHHHHHHHHHHHHC-C-----CeEEEEECcHHHHHHHHHHHHHHHHHc-----------C-CCCHHH---
Confidence 458999999999999999999999 8 999999999873211000011101110 0 111000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch--hHHHHHHHHHhhhhccCCCCEEEEeeec
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST--ETKEVFEEISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~--~~~~vl~~i~~~l~~~~~~~~Ivs~~kG 199 (333)
.++ .+.++.+++|++ ++.+||+||+|||++ ..+++++++.+++++ ++++++.+++
T Consensus 112 ------~~~-------------~~~~i~~t~dl~-al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~---~aIlasnTSs 168 (460)
T 3k6j_A 112 ------IEK-------------INANLKITSDFH-KLSNCDLIVESVIEDMKLKKELFANLENICKS---TCIFGTNTSS 168 (460)
T ss_dssp ------HHH-------------HHTTEEEESCGG-GCTTCSEEEECCCSCHHHHHHHHHHHHTTSCT---TCEEEECCSS
T ss_pred ------HHH-------------HhcceEEeCCHH-HHccCCEEEEcCCCCHHHHHHHHHHHHhhCCC---CCEEEecCCC
Confidence 000 012688889985 689999999999975 578899999999987 7888888877
Q ss_pred CcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhccCceeEEE-e--CChhhHHHHHHHhCCCCeEEEecCC
Q 019978 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARI-C--GAEKWRKPLAKFLRRPHFTVWDNGD 276 (333)
Q Consensus 200 i~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~~~~~~~~~-~--~~~~~~~~l~~ll~~~~~~v~~s~D 276 (333)
+... .+.+.+..+ ..+. -..|-.+.. ..+...++ . .+++.++.+..++...+-.+....|
T Consensus 169 l~i~------------~ia~~~~~p-~r~i-G~HffnPv~---~m~LvEIv~g~~Ts~e~~~~~~~l~~~lGk~~v~v~d 231 (460)
T 3k6j_A 169 LDLN------------EISSVLRDP-SNLV-GIHFFNPAN---VIRLVEIIYGSHTSSQAIATAFQACESIKKLPVLVGN 231 (460)
T ss_dssp SCHH------------HHHTTSSSG-GGEE-EEECCSSTT---TCCEEEEECCSSCCHHHHHHHHHHHHHTTCEEEEESS
T ss_pred hhHH------------HHHHhccCC-cceE-EEEecchhh---hCCEEEEEeCCCCCHHHHHHHHHHHHHhCCEEEEEec
Confidence 6653 245545432 1221 111211211 11222233 2 2567888999999888877776677
Q ss_pred hhH
Q 019978 277 LVT 279 (333)
Q Consensus 277 i~g 279 (333)
.-|
T Consensus 232 ~pG 234 (460)
T 3k6j_A 232 CKS 234 (460)
T ss_dssp CCH
T ss_pred ccH
Confidence 655
No 82
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.22 E-value=7.8e-11 Score=118.41 Aligned_cols=179 Identities=16% Similarity=0.168 Sum_probs=111.8
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
++||+|||+|.||++||..|+++ | ++|++|+++++.+++.... +... +.++..... +...
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~a-G-----~~V~l~D~~~e~l~~~~~~-----i~~~---l~~~~~~g~-~~~~----- 64 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASH-G-----HQVLLYDISAEALTRAIDG-----IHAR---LNSRVTRGK-LTAE----- 64 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSCHHHHHHHHHH-----HHHH---HHTTTTTTS-SCHH-----
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-C-----CeEEEEECCHHHHHHHHHH-----HHHH---HHHHHHcCC-CCHH-----
Confidence 57999999999999999999999 8 9999999999877653321 1110 010000000 0000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch--hHHHHHHHHHhhhhccCCCCEEEEeeecC
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST--ETKEVFEEISRYWKERITVPVIISLAKGV 200 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~--~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi 200 (333)
. .+++ +.++.+++|++ ++.+||+||+|||++ ..+++++++.+++++ ++++++.++++
T Consensus 65 --~--~~~~-------------~~~i~~~~~~~-~~~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~---~~IlasntSti 123 (483)
T 3mog_A 65 --T--CERT-------------LKRLIPVTDIH-ALAAADLVIEAASERLEVKKALFAQLAEVCPP---QTLLTTNTSSI 123 (483)
T ss_dssp --H--HHHH-------------HHTEEEECCGG-GGGGCSEEEECCCCCHHHHHHHHHHHHHHSCT---TCEEEECCSSS
T ss_pred --H--HHHH-------------HhceeEeCCHH-HhcCCCEEEEcCCCcHHHHHHHHHHHHHhhcc---CcEEEecCCCC
Confidence 0 0000 12678888885 688999999999987 568999999999887 78887888887
Q ss_pred cccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHHhccCceeEEEeC---ChhhHHHHHHHhCCCCeEEEecCCh
Q 019978 201 EAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICG---AEKWRKPLAKFLRRPHFTVWDNGDL 277 (333)
Q Consensus 201 ~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev~~~~~~~~~~~~---~~~~~~~l~~ll~~~~~~v~~s~Di 277 (333)
... .+.+.+..+ ..+ +-..|..+..+. +...++.+ +++..+.+..++...+-.+....|.
T Consensus 124 ~i~------------~ia~~~~~p-~~~-ig~hf~~Pa~v~---~Lvevv~g~~Ts~e~~~~~~~l~~~lGk~~v~v~d~ 186 (483)
T 3mog_A 124 SIT------------AIAAEIKNP-ERV-AGLHFFNPAPVM---KLVEVVSGLATAAEVVEQLCELTLSWGKQPVRCHST 186 (483)
T ss_dssp CHH------------HHTTTSSSG-GGE-EEEEECSSTTTC---CEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CHH------------HHHHHccCc-cce-EEeeecChhhhC---CeEEEecCCCCCHHHHHHHHHHHHHhCCEEEEEecc
Confidence 754 244444322 111 111222222222 11123332 5677888888888877666555565
Q ss_pred hH
Q 019978 278 VT 279 (333)
Q Consensus 278 ~g 279 (333)
-|
T Consensus 187 ~G 188 (483)
T 3mog_A 187 PG 188 (483)
T ss_dssp TT
T ss_pred Cc
Confidence 44
No 83
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.16 E-value=5.8e-10 Score=117.17 Aligned_cols=179 Identities=13% Similarity=0.132 Sum_probs=110.1
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
.++||+|||+|.||+.||..|+++ | ++|++|+++++.+++.... +... ++++.... .+...
T Consensus 311 ~~~kV~VIGaG~MG~~iA~~la~a-G-----~~V~l~D~~~~~~~~~~~~-----i~~~---l~~~~~~G-~~~~~---- 371 (725)
T 2wtb_A 311 KIKKVAIIGGGLMGSGIATALILS-N-----YPVILKEVNEKFLEAGIGR-----VKAN---LQSRVRKG-SMSQE---- 371 (725)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHTT-T-----CCEEEECSSHHHHHHHHHH-----HHHH---HHHTTC-----CTT----
T ss_pred cCcEEEEEcCCHhhHHHHHHHHhC-C-----CEEEEEECCHHHHHHHHHH-----HHHH---HHHHHhcC-CCCHH----
Confidence 357899999999999999999999 8 9999999999876543211 1110 01000000 01000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh--HHHHHHHHHhhhhccCCCCEEEEeeec
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE--TKEVFEEISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~--~~~vl~~i~~~l~~~~~~~~Ivs~~kG 199 (333)
. . +..+.+++.++|+ +++.+||+||+|||.+. .+++++++.+++++ ++++++.+++
T Consensus 372 ---~--~-------------~~~~~~i~~~~d~-~~~~~aDlVIeaVpe~~~vk~~v~~~l~~~~~~---~~IlasntSt 429 (725)
T 2wtb_A 372 ---K--F-------------EKTMSLLKGSLDY-ESFRDVDMVIEAVIENISLKQQIFADLEKYCPQ---HCILASNTST 429 (725)
T ss_dssp ---H--H-------------HHTTTSEEEESSS-GGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCT---TCEEEECCSS
T ss_pred ---H--H-------------HHHhcceEEeCCH-HHHCCCCEEEEcCcCCHHHHHHHHHHHHhhCCC---CcEEEeCCCC
Confidence 0 0 0011368888888 57899999999999875 78899999998887 7888787877
Q ss_pred CcccccCCccCCCHHHHHHhHhCCCCCcEE-EEcCCCchHHHhccCceeEEEeC---ChhhHHHHHHHhCCCCeEEEecC
Q 019978 200 VEAELEAVPRIITPTQMINRATGVPIENIL-YLGGPNIASEIYNKEYANARICG---AEKWRKPLAKFLRRPHFTVWDNG 275 (333)
Q Consensus 200 i~~~~~~~~~~~~~se~i~~~lg~~~~~~~-vl~GP~~a~ev~~~~~~~~~~~~---~~~~~~~l~~ll~~~~~~v~~s~ 275 (333)
++.. + +.+.+..+...+. -..-|.. ..+...++.+ +++..+.+..++...+..+....
T Consensus 430 l~i~-----------~-la~~~~~p~~~iG~hf~~P~~------~~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~ 491 (725)
T 2wtb_A 430 IDLN-----------K-IGERTKSQDRIVGAHFFSPAH------IMPLLEIVRTNHTSAQVIVDLLDVGKKIKKTPVVVG 491 (725)
T ss_dssp SCHH-----------H-HTTTCSCTTTEEEEEECSSTT------TCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCHH-----------H-HHHHhcCCCCEEEecCCCCcc------cCceEEEEECCCCCHHHHHHHHHHHHHhCCEEEEEC
Confidence 7653 2 4443432211111 1122322 1222223332 56778888888887776665555
Q ss_pred ChhH
Q 019978 276 DLVT 279 (333)
Q Consensus 276 Di~g 279 (333)
|..|
T Consensus 492 d~~G 495 (725)
T 2wtb_A 492 NCTG 495 (725)
T ss_dssp SSTT
T ss_pred CCcc
Confidence 6444
No 84
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.14 E-value=7e-10 Score=110.78 Aligned_cols=118 Identities=15% Similarity=0.176 Sum_probs=80.3
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
.++||+|||+|.||+.||..|+++ | ++|++|+++++.+++.... +... +.+ ++.. +.+
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~-G-----~~V~l~D~~~~~~~~~~~~-----i~~~---l~~------~~~~--g~~ 93 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARV-G-----ISVVAVESDPKQLDAAKKI-----ITFT---LEK------EASR--AHQ 93 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEECSSHHHHHHHHHH-----HHHH---HHH------HHHH--HHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhC-C-----CeEEEEECCHHHHHHHHHH-----HHHH---HHH------HHHc--CCC
Confidence 468999999999999999999999 8 9999999998876543321 1100 000 0000 000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch--hHHHHHHHHHhhhhccCCCCEEEEeeec
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST--ETKEVFEEISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~--~~~~vl~~i~~~l~~~~~~~~Ivs~~kG 199 (333)
..... + ....++++++ +++.+||+||+|||++ ...++++++.+++++ +++|++.+++
T Consensus 94 ~~~~~---------------~--~~~~~i~~~~-~~~~~aDlVIeaVpe~~~~k~~v~~~l~~~~~~---~~ii~snTs~ 152 (463)
T 1zcj_A 94 NGQAS---------------A--KPKLRFSSST-KELSTVDLVVEAVFEDMNLKKKVFAELSALCKP---GAFLCTNTSA 152 (463)
T ss_dssp TTCCC---------------C--CCCEEEESCG-GGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCT---TCEEEECCSS
T ss_pred CHHHH---------------H--HHHhhhcCCH-HHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCC---CeEEEeCCCC
Confidence 00000 0 0124457777 4688999999999986 468899999998887 7888887777
Q ss_pred Ccc
Q 019978 200 VEA 202 (333)
Q Consensus 200 i~~ 202 (333)
+..
T Consensus 153 ~~~ 155 (463)
T 1zcj_A 153 LNV 155 (463)
T ss_dssp SCH
T ss_pred cCH
Confidence 654
No 85
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.14 E-value=4.2e-10 Score=106.23 Aligned_cols=157 Identities=17% Similarity=0.148 Sum_probs=101.7
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
+-+||+|||+|.||+.||..|+ + | ++|++|+++++.+++.... +..
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-a-G-----~~V~v~d~~~~~~~~~~~~----------------------l~~----- 56 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-S-K-----HEVVLQDVSEKALEAAREQ----------------------IPE----- 56 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-T-T-----SEEEEECSCHHHHHHHHHH----------------------SCG-----
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-c-C-----CEEEEEECCHHHHHHHHHH----------------------HHH-----
Confidence 4589999999999999999999 9 8 9999999998766532110 100
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh--HHHHHHHHHhhhhccCCCCEEEEeeec
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE--TKEVFEEISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~--~~~vl~~i~~~l~~~~~~~~Ivs~~kG 199 (333)
..+.++++++++++ +.+||+||.|+|... ...++.++.++ + ++++++.+.+
T Consensus 57 ---------------------~~~~~i~~~~~~~~-~~~aDlVieavpe~~~vk~~l~~~l~~~--~---~~IlasntSt 109 (293)
T 1zej_A 57 ---------------------ELLSKIEFTTTLEK-VKDCDIVMEAVFEDLNTKVEVLREVERL--T---NAPLCSNTSV 109 (293)
T ss_dssp ---------------------GGGGGEEEESSCTT-GGGCSEEEECCCSCHHHHHHHHHHHHTT--C---CSCEEECCSS
T ss_pred ---------------------HHhCCeEEeCCHHH-HcCCCEEEEcCcCCHHHHHHHHHHHhcC--C---CCEEEEECCC
Confidence 00125777788875 889999999999875 67777888776 5 6777776666
Q ss_pred CcccccCCccCCCHHHHHHhHhCCCCCcEE-EEcCCCchHHHhccCceeEEE-e--CChhhHHHHHHHhCCCCeEEEecC
Q 019978 200 VEAELEAVPRIITPTQMINRATGVPIENIL-YLGGPNIASEIYNKEYANARI-C--GAEKWRKPLAKFLRRPHFTVWDNG 275 (333)
Q Consensus 200 i~~~~~~~~~~~~~se~i~~~lg~~~~~~~-vl~GP~~a~ev~~~~~~~~~~-~--~~~~~~~~l~~ll~~~~~~v~~s~ 275 (333)
+.+. .+.+.+..+..... -..-|.. ..+...++ + .+++..+.+..++...+-++....
T Consensus 110 i~~~------------~~a~~~~~~~r~~G~Hf~~Pv~------~~~lveiv~g~~t~~~~~~~~~~l~~~lGk~~v~v~ 171 (293)
T 1zej_A 110 ISVD------------DIAERLDSPSRFLGVHWMNPPH------VMPLVEIVISRFTDSKTVAFVEGFLRELGKEVVVCK 171 (293)
T ss_dssp SCHH------------HHHTTSSCGGGEEEEEECSSTT------TCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCHH------------HHHHHhhcccceEeEEecCccc------cCCEEEEECCCCCCHHHHHHHHHHHHHcCCeEEEec
Confidence 6553 23443332211111 1112432 22332233 3 367788999999988776655444
Q ss_pred Ch
Q 019978 276 DL 277 (333)
Q Consensus 276 Di 277 (333)
|.
T Consensus 172 d~ 173 (293)
T 1zej_A 172 GQ 173 (293)
T ss_dssp SS
T ss_pred cc
Confidence 54
No 86
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.14 E-value=2.1e-10 Score=120.40 Aligned_cols=179 Identities=13% Similarity=0.114 Sum_probs=109.8
Q ss_pred CCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 41 ~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
..++||+|||+|.||+.||..|+++ | ++|++|+++++.+++... . +... ++++.... .+....
T Consensus 312 ~~i~kV~VIGaG~MG~~iA~~la~a-G-----~~V~l~D~~~~~~~~~~~-~----i~~~---l~~~~~~G-~~~~~~-- 374 (715)
T 1wdk_A 312 KDVKQAAVLGAGIMGGGIAYQSASK-G-----TPILMKDINEHGIEQGLA-E----AAKL---LVGRVDKG-RMTPAK-- 374 (715)
T ss_dssp CCCSSEEEECCHHHHHHHHHHHHHT-T-----CCEEEECSSHHHHHHHHH-H----HHHH---HHHHHTTT-SSCHHH--
T ss_pred ccCCEEEEECCChhhHHHHHHHHhC-C-----CEEEEEECCHHHHHHHHH-H----HHHH---HHHHHhcC-CCCHHH--
Confidence 4578999999999999999999999 8 999999999987654211 0 1110 11100000 010000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh--HHHHHHHHHhhhhccCCCCEEEEeee
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE--TKEVFEEISRYWKERITVPVIISLAK 198 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~--~~~vl~~i~~~l~~~~~~~~Ivs~~k 198 (333)
.+++ +.++++++|+ +++.+||+||+|||.+. .+++++++.+++++ ++++++.++
T Consensus 375 -------~~~~-------------~~~i~~~~d~-~~~~~aDlVIeaV~e~~~vk~~v~~~l~~~~~~---~~IlasntS 430 (715)
T 1wdk_A 375 -------MAEV-------------LNGIRPTLSY-GDFGNVDLVVEAVVENPKVKQAVLAEVENHVRE---DAILASNTS 430 (715)
T ss_dssp -------HHHH-------------HHHEEEESSS-TTGGGCSEEEECCCSCHHHHHHHHHHHHTTSCT---TCEEEECCS
T ss_pred -------HHHH-------------hcCeEEECCH-HHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCC---CeEEEeCCC
Confidence 0000 0147778888 67899999999999764 78899999998887 788888887
Q ss_pred cCcccccCCccCCCHHHHHHhHhCCCCCcEEE--EcCCCchHHHhccCceeEEE-e--CChhhHHHHHHHhCCCCeEEEe
Q 019978 199 GVEAELEAVPRIITPTQMINRATGVPIENILY--LGGPNIASEIYNKEYANARI-C--GAEKWRKPLAKFLRRPHFTVWD 273 (333)
Q Consensus 199 Gi~~~~~~~~~~~~~se~i~~~lg~~~~~~~v--l~GP~~a~ev~~~~~~~~~~-~--~~~~~~~~l~~ll~~~~~~v~~ 273 (333)
+++.. + +.+.+..+ ..+.- ..-|.. ..+...++ + .+++..+.+..++...+..+..
T Consensus 431 tl~i~-----------~-la~~~~~~-~~~ig~hf~~P~~------~~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~ 491 (715)
T 1wdk_A 431 TISIS-----------L-LAKALKRP-ENFVGMHFFNPVH------MMPLVEVIRGEKSSDLAVATTVAYAKKMGKNPIV 491 (715)
T ss_dssp SSCHH-----------H-HGGGCSCG-GGEEEEECCSSTT------TCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCHH-----------H-HHHHhcCc-cceEEEEccCCcc------cCceEEEEECCCCCHHHHHHHHHHHHHhCCEeEE
Confidence 77653 2 44444322 11111 111321 11222223 2 2567788888888877766655
Q ss_pred cCChhH
Q 019978 274 NGDLVT 279 (333)
Q Consensus 274 s~Di~g 279 (333)
..|.-|
T Consensus 492 v~d~~G 497 (715)
T 1wdk_A 492 VNDCPG 497 (715)
T ss_dssp EESCTT
T ss_pred EcCCCC
Confidence 556444
No 87
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.09 E-value=4.6e-10 Score=108.13 Aligned_cols=158 Identities=9% Similarity=0.068 Sum_probs=98.6
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
.++||+|||+|.||++||..|.+. | ++|++|+|+++.++.+. +
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~~-G-----~~V~~~dr~~~~~~~a~---------~---------------------- 49 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHAA-N-----HSVFGYNRSRSGAKSAV---------D---------------------- 49 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSCHHHHHHHH---------H----------------------
T ss_pred CCCEEEEEeecHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHH---------H----------------------
Confidence 357999999999999999999999 8 89999999986543211 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc----CCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEee
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW----DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~----~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~ 197 (333)
..+..++++++++. ++|+||+|||...+.++++++.++ ++ +++|+.++
T Consensus 50 ------------------------~G~~~~~~~~e~~~~a~~~aDlVilavP~~~~~~vl~~l~~~-~~---~~iv~Dv~ 101 (341)
T 3ktd_A 50 ------------------------EGFDVSADLEATLQRAAAEDALIVLAVPMTAIDSLLDAVHTH-AP---NNGFTDVV 101 (341)
T ss_dssp ------------------------TTCCEESCHHHHHHHHHHTTCEEEECSCHHHHHHHHHHHHHH-CT---TCCEEECC
T ss_pred ------------------------cCCeeeCCHHHHHHhcccCCCEEEEeCCHHHHHHHHHHHHcc-CC---CCEEEEcC
Confidence 01234466666554 479999999999999999999886 55 66665543
Q ss_pred ecCcccccCCccCCCHHHHHHhHhCC----CCCcEE--EEcCCCchH-HHhccCceeEEEe--CChh--------hHHHH
Q 019978 198 KGVEAELEAVPRIITPTQMINRATGV----PIENIL--YLGGPNIAS-EIYNKEYANARIC--GAEK--------WRKPL 260 (333)
Q Consensus 198 kGi~~~~~~~~~~~~~se~i~~~lg~----~~~~~~--vl~GP~~a~-ev~~~~~~~~~~~--~~~~--------~~~~l 260 (333)
++... +.+.+.+.++. +.+|+. ..+||..+. ++..+.++.++.. .+++ ..+.+
T Consensus 102 -Svk~~---------i~~~~~~~~~~~~~v~~HPmaG~e~sG~~aa~~~Lf~g~~~iltp~~~~~~e~~~~~~~~~~~~v 171 (341)
T 3ktd_A 102 -SVKTA---------VYDAVKARNMQHRYVGSHPMAGTANSGWSASMDGLFKRAVWVVTFDQLFDGTDINSTWISIWKDV 171 (341)
T ss_dssp -SCSHH---------HHHHHHHTTCGGGEECEEECCSCC-CCGGGCCSSTTTTCEEEECCGGGTSSCCCCHHHHHHHHHH
T ss_pred -CCChH---------HHHHHHHhCCCCcEecCCccccccccchhhhhhHHhcCCeEEEEeCCCCChhhhccchHHHHHHH
Confidence 22211 11223333320 011111 012332222 2334444433322 2345 78899
Q ss_pred HHHhCCCCeEEEec
Q 019978 261 AKFLRRPHFTVWDN 274 (333)
Q Consensus 261 ~~ll~~~~~~v~~s 274 (333)
+++|+..|.++...
T Consensus 172 ~~l~~~~Ga~v~~~ 185 (341)
T 3ktd_A 172 VQMALAVGAEVVPS 185 (341)
T ss_dssp HHHHHHTTCEEEEC
T ss_pred HHHHHHcCCEEEEe
Confidence 99999988766644
No 88
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=99.05 E-value=3.5e-09 Score=105.92 Aligned_cols=153 Identities=14% Similarity=0.108 Sum_probs=101.5
Q ss_pred ceEEEECCCHHHHHHHHHHHHh-----cCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhh
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDS-----YGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~-----~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~ 118 (333)
+||+|||+|+||.++|..|.+. .| ++|+++.++.+...+.. .+
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s~~~~g~G-----~~ViVg~r~~sks~e~A--------~e------------------- 102 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDSLAEAKSD-----IVVKIGLRKGSKSFDEA--------RA------------------- 102 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHHHHHTTCC-----CEEEEEECTTCSCHHHH--------HH-------------------
T ss_pred CEEEEEeEhHHHHHHHHHHHhcccccCCC-----CEEEEEeCCchhhHHHH--------HH-------------------
Confidence 6999999999999999999875 14 78887777643221100 00
Q ss_pred hhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeee
Q 019978 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (333)
Q Consensus 119 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~k 198 (333)
.|+.. .-....++.+++++||+||+++|.....++++++.+.+++ +++ |+++.
T Consensus 103 ---------------~G~~v--------~d~ta~s~aEAa~~ADVVILaVP~~~~~eVl~eI~p~LK~---GaI-Ls~Aa 155 (525)
T 3fr7_A 103 ---------------AGFTE--------ESGTLGDIWETVSGSDLVLLLISDAAQADNYEKIFSHMKP---NSI-LGLSH 155 (525)
T ss_dssp ---------------TTCCT--------TTTCEEEHHHHHHHCSEEEECSCHHHHHHHHHHHHHHSCT---TCE-EEESS
T ss_pred ---------------CCCEE--------ecCCCCCHHHHHhcCCEEEECCChHHHHHHHHHHHHhcCC---CCe-EEEeC
Confidence 01100 0001246778899999999999999988999999999987 665 78888
Q ss_pred cCcccccCCccCCCHHHHHHh---HhCCCCCcEEEEcCCCchHHH-------h-----ccCceeEEEeC--ChhhHHHHH
Q 019978 199 GVEAELEAVPRIITPTQMINR---ATGVPIENILYLGGPNIASEI-------Y-----NKEYANARICG--AEKWRKPLA 261 (333)
Q Consensus 199 Gi~~~~~~~~~~~~~se~i~~---~lg~~~~~~~vl~GP~~a~ev-------~-----~~~~~~~~~~~--~~~~~~~l~ 261 (333)
|+... ++++ .++. ..-+++.+|+.+..+ + .|.++.+.+.. +.+..+.+.
T Consensus 156 Gf~I~------------~le~~~i~~p~--dv~VVrVmPNtPg~~VR~~y~~G~~~~g~Gv~~liAv~qd~tgea~e~al 221 (525)
T 3fr7_A 156 GFLLG------------HLQSAGLDFPK--NISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVAL 221 (525)
T ss_dssp SHHHH------------HHHHTTCCCCT--TSEEEEEEESSCHHHHHHHHHHHTTSTTCSCCEEEEEEECSSSCHHHHHH
T ss_pred CCCHH------------HHhhhcccCCC--CCcEEEEecCCCchhHHHHHhcccccccCCccEEEEcCCCCCHHHHHHHH
Confidence 98763 2443 2332 224577889888765 3 45665544422 235666777
Q ss_pred HHhCCCCe
Q 019978 262 KFLRRPHF 269 (333)
Q Consensus 262 ~ll~~~~~ 269 (333)
.+|...|.
T Consensus 222 ala~aiG~ 229 (525)
T 3fr7_A 222 GWSVALGS 229 (525)
T ss_dssp HHHHHTTC
T ss_pred HHHHHCCC
Confidence 77776654
No 89
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=98.96 E-value=1.1e-09 Score=103.22 Aligned_cols=107 Identities=17% Similarity=0.286 Sum_probs=74.0
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCe--eEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~--~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (333)
.+|||+|||+|+||+++|..|+.+ | + +|++|++++++++.. .++..+ ...+...
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~-g-----~~~~V~l~d~~~~~~~~~-------~~~~~~--------~~~~~~~--- 61 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQR-G-----IAREIVLEDIAKERVEAE-------VLDMQH--------GSSFYPT--- 61 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-T-----CCSEEEEECSSHHHHHHH-------HHHHHH--------TGGGSTT---
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-C-----CCCEEEEEeCChhHHHHH-------HHHHHh--------hhhhcCC---
Confidence 358999999999999999999998 8 7 999999997654310 011000 0000000
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh----------------HHHHHHHHHhh
Q 019978 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE----------------TKEVFEEISRY 183 (333)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~----------------~~~vl~~i~~~ 183 (333)
..+..+++. ++++++|+||++++... +.++++++.++
T Consensus 62 --------------------------~~v~~~~~~-~~~~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~ 114 (319)
T 1lld_A 62 --------------------------VSIDGSDDP-EICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV 114 (319)
T ss_dssp --------------------------CEEEEESCG-GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------eEEEeCCCH-HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 135555565 46889999999996543 33788888875
Q ss_pred hhccCCCCEEEEeeecCccc
Q 019978 184 WKERITVPVIISLAKGVEAE 203 (333)
Q Consensus 184 l~~~~~~~~Ivs~~kGi~~~ 203 (333)
.+ ++.|++++||+...
T Consensus 115 -~~---~~~vi~~~Np~~~~ 130 (319)
T 1lld_A 115 -AP---NAIYMLITNPVDIA 130 (319)
T ss_dssp -CT---TSEEEECCSSHHHH
T ss_pred -CC---CceEEEecCchHHH
Confidence 44 68899999998864
No 90
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=98.95 E-value=5.4e-09 Score=99.09 Aligned_cols=107 Identities=10% Similarity=0.159 Sum_probs=76.6
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCe-eEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~-~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
.+|||+|||+|+||+++|..|+.+ | + +|++|+++++.++.... .-.+ ... +..
T Consensus 3 ~~~kI~VIGaG~~G~~ia~~la~~-g-----~~~V~l~D~~~~~~~~~~~-------~l~~-------~~~-~~~----- 56 (317)
T 2ewd_A 3 ERRKIAVIGSGQIGGNIAYIVGKD-N-----LADVVLFDIAEGIPQGKAL-------DITH-------SMV-MFG----- 56 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-T-----CCEEEEECSSSSHHHHHHH-------HHHH-------HHH-HHT-----
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-C-----CceEEEEeCCchHHHHHHH-------HHHh-------hhh-hcC-----
Confidence 357999999999999999999999 8 7 99999999876543110 0000 000 000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEec--------------Cc--hhHHHHHHHHHhhh
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL--------------PS--TETKEVFEEISRYW 184 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaV--------------ps--~~~~~vl~~i~~~l 184 (333)
. ..++..++|. +++++||+||+++ +. ..++++++++.++.
T Consensus 57 -----~------------------~~~i~~t~d~-~a~~~aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~ 112 (317)
T 2ewd_A 57 -----S------------------TSKVIGTDDY-ADISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYC 112 (317)
T ss_dssp -----C------------------CCCEEEESCG-GGGTTCSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHC
T ss_pred -----C------------------CcEEEECCCH-HHhCCCCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHC
Confidence 0 0257777888 6789999999999 32 35788999998875
Q ss_pred hccCCCCEEEEeeecCcc
Q 019978 185 KERITVPVIISLAKGVEA 202 (333)
Q Consensus 185 ~~~~~~~~Ivs~~kGi~~ 202 (333)
+ +++++.++|....
T Consensus 113 ~----~~iii~~sNp~~~ 126 (317)
T 2ewd_A 113 P----NAFVICITNPLDV 126 (317)
T ss_dssp T----TSEEEECCSSHHH
T ss_pred C----CcEEEEeCChHHH
Confidence 4 5788888886543
No 91
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=98.94 E-value=5e-09 Score=100.29 Aligned_cols=106 Identities=12% Similarity=0.175 Sum_probs=75.4
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCe-eEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~-~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
+|||+|||+|.||+++|..|+.+ | + +|.+|++++++++... ..- ++ .+ .++.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~-g-----~~~V~L~D~~~~~~~~~~-------~~l-----~~--~~-~~~~------ 61 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALR-E-----LADVVLYDVVKGMPEGKA-------LDL-----SH--VT-SVVD------ 61 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-T-----CCEEEEECSSSSHHHHHH-------HHH-----HH--HH-HHTT------
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CCeEEEEECChhHHHHHH-------HHH-----Hh--hh-hccC------
Confidence 47999999999999999999999 8 7 8999999998665311 000 00 00 0110
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEec--Cch-------------------hHHHHHHHH
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL--PST-------------------ETKEVFEEI 180 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaV--ps~-------------------~~~~vl~~i 180 (333)
. ..+++.++|+++++++||+||+++ |.. .+.++++++
T Consensus 62 ----~------------------~~~i~~t~d~~ea~~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i 119 (331)
T 1pzg_A 62 ----T------------------NVSVRAEYSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNI 119 (331)
T ss_dssp ----C------------------CCCEEEECSHHHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHH
T ss_pred ----C------------------CCEEEEeCCHHHHhCCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0 026888899988899999999998 532 277888888
Q ss_pred HhhhhccCCCCEEEEeeecCc
Q 019978 181 SRYWKERITVPVIISLAKGVE 201 (333)
Q Consensus 181 ~~~l~~~~~~~~Ivs~~kGi~ 201 (333)
.++. + +..++..+|-..
T Consensus 120 ~~~~-p---~a~vi~~tNP~~ 136 (331)
T 1pzg_A 120 KKYC-P---KTFIIVVTNPLD 136 (331)
T ss_dssp HHHC-T---TCEEEECCSSHH
T ss_pred HHHC-C---CcEEEEEcCchH
Confidence 8876 3 567766665443
No 92
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.90 E-value=5.6e-09 Score=98.51 Aligned_cols=106 Identities=18% Similarity=0.183 Sum_probs=74.4
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
||||+|||+|+||+++|..|+.+ |. . ++|++|++++++++.+..+ +... . .++.
T Consensus 1 m~kI~VIGaG~~G~~la~~L~~~-g~--~-~~V~l~d~~~~~~~~~~~~-----l~~~---------~-~~~~------- 54 (309)
T 1hyh_A 1 ARKIGIIGLGNVGAAVAHGLIAQ-GV--A-DDYVFIDANEAKVKADQID-----FQDA---------M-ANLE------- 54 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-TC--C-SEEEEECSSHHHHHHHHHH-----HHHH---------G-GGSS-------
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CC--C-CEEEEEcCCHHHHHHHHHH-----HHhh---------h-hhcC-------
Confidence 47999999999999999999998 72 1 5899999998765432210 0000 0 0000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEE-ecCHHHHhcCCCEEEEecCchh--------------------HHHHHHHHH
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKV-VTNLQEAVWDADIVINGLPSTE--------------------TKEVFEEIS 181 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~-t~d~~ea~~~aDlIIlaVps~~--------------------~~~vl~~i~ 181 (333)
..+.+ ++|+ ++++++|+||+++|+.. +.++++++.
T Consensus 55 -----------------------~~~~~~~~d~-~~~~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~ 110 (309)
T 1hyh_A 55 -----------------------AHGNIVINDW-AALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLK 110 (309)
T ss_dssp -----------------------SCCEEEESCG-GGGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHH
T ss_pred -----------------------CCeEEEeCCH-HHhCCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 02333 4677 67899999999999865 478888887
Q ss_pred hhhhccCCCCEEEEeeecCcc
Q 019978 182 RYWKERITVPVIISLAKGVEA 202 (333)
Q Consensus 182 ~~l~~~~~~~~Ivs~~kGi~~ 202 (333)
++.+ ++.++.++|++..
T Consensus 111 ~~~~----~~~ii~~tNp~~~ 127 (309)
T 1hyh_A 111 ESGF----HGVLVVISNPVDV 127 (309)
T ss_dssp HTTC----CSEEEECSSSHHH
T ss_pred HHCC----CcEEEEEcCcHHH
Confidence 7653 5677778988764
No 93
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=98.85 E-value=1.7e-08 Score=96.50 Aligned_cols=103 Identities=17% Similarity=0.232 Sum_probs=72.8
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCe-eEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~-~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
|||+|||+|.||+++|..|+.+ | + +|.+||+++++++.... . +... +. ++.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~-g-----~~~V~L~Di~~~~l~~~~~-~----l~~~---------~~-~~~------- 66 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQK-D-----LGDVYMFDIIEGVPQGKAL-D----LNHC---------MA-LIG------- 66 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECSSTTHHHHHHH-H----HHHH---------HH-HHT-------
T ss_pred CEEEEECCCHHHHHHHHHHHhC-C-----CCeEEEEECCHHHHHHHHH-H----HHhH---------hh-ccC-------
Confidence 6999999999999999999999 8 7 89999999876653110 0 0000 00 000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEec--Cc--------------hhHHHHHHHHHhhhhc
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL--PS--------------TETKEVFEEISRYWKE 186 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaV--ps--------------~~~~~vl~~i~~~l~~ 186 (333)
. ..+++.++|. +++++||+||+++ |. ..+.++++++.++. +
T Consensus 67 ---~------------------~~~i~~t~d~-~al~~aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~-p 123 (328)
T 2hjr_A 67 ---S------------------PAKIFGENNY-EYLQNSDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC-P 123 (328)
T ss_dssp ---C------------------CCCEEEESCG-GGGTTCSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-T
T ss_pred ---C------------------CCEEEECCCH-HHHCCCCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-C
Confidence 0 0268888888 7799999999998 54 23777888888876 4
Q ss_pred cCCCCEEEEeeecC
Q 019978 187 RITVPVIISLAKGV 200 (333)
Q Consensus 187 ~~~~~~Ivs~~kGi 200 (333)
+..++..+|-.
T Consensus 124 ---~a~viv~tNP~ 134 (328)
T 2hjr_A 124 ---NAFVICITNPL 134 (328)
T ss_dssp ---TCEEEECCSSH
T ss_pred ---CeEEEEecCch
Confidence 56766667643
No 94
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=98.84 E-value=3.4e-08 Score=103.87 Aligned_cols=119 Identities=14% Similarity=0.192 Sum_probs=86.3
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
...||+|||+|.||+.||..++.. | ++|++++++++.+++... .+...+... .... ...
T Consensus 315 ~i~~v~ViGaG~MG~gIA~~~a~a-G-----~~V~l~D~~~~~l~~~~~-~i~~~l~~~-------~~~~-~~~------ 373 (742)
T 3zwc_A 315 PVSSVGVLGLGTMGRGIAISFARV-G-----ISVVAVESDPKQLDAAKK-IITFTLEKE-------ASRA-HQN------ 373 (742)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEECSSHHHHHHHHH-HHHHHHHHH-------HHHH-HTT------
T ss_pred cccEEEEEcccHHHHHHHHHHHhC-C-----CchhcccchHhhhhhHHH-HHHHHHHHH-------HHhc-ccc------
Confidence 457999999999999999999999 8 999999999987654321 111111110 0000 000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch--hHHHHHHHHHhhhhccCCCCEEEEeeec
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST--ETKEVFEEISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~--~~~~vl~~i~~~l~~~~~~~~Ivs~~kG 199 (333)
+ . +.....+..+++.++ +.+||+||.||+.. ...++++++..++++ ++++.|.|++
T Consensus 374 -~-~----------------~~~~~~~~~~~~~~~-l~~aDlVIEAV~E~l~iK~~vf~~le~~~~~---~aIlASNTSs 431 (742)
T 3zwc_A 374 -G-Q----------------ASAKPKLRFSSSTKE-LSTVDLVVEAVFEDMNLKKKVFAELSALCKP---GAFLCTNTSA 431 (742)
T ss_dssp -T-C----------------CCCCCCEEEESCGGG-GGSCSEEEECCCSCHHHHHHHHHHHHHHSCT---TCEEEECCSS
T ss_pred -c-h----------------hhhhhhhcccCcHHH-HhhCCEEEEeccccHHHHHHHHHHHhhcCCC---CceEEecCCc
Confidence 0 0 111236788888764 78999999999986 689999999999998 8988888888
Q ss_pred Cccc
Q 019978 200 VEAE 203 (333)
Q Consensus 200 i~~~ 203 (333)
+...
T Consensus 432 l~i~ 435 (742)
T 3zwc_A 432 LNVD 435 (742)
T ss_dssp SCHH
T ss_pred CChH
Confidence 8865
No 95
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=98.79 E-value=2.4e-08 Score=94.84 Aligned_cols=103 Identities=17% Similarity=0.213 Sum_probs=71.8
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCe--eEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~--~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
|||+|||+|+||+++|..|+.+ | + +|++|++++++++.+.. -+... .+ +...
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~-g-----~~~~V~l~D~~~~~~~~~~~-----~l~~~---------~~-~~~~----- 54 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMK-G-----FAREMVLIDVDKKRAEGDAL-----DLIHG---------TP-FTRR----- 54 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-T-----CCSEEEEECSSHHHHHHHHH-----HHHHH---------GG-GSCC-----
T ss_pred CEEEEECCCHHHHHHHHHHHhC-C-----CCCeEEEEeCChHHHHHHHH-----HHHhh---------hh-hcCC-----
Confidence 6999999999999999999999 8 7 99999999876543211 00000 00 0000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh----------------HHHHHHHHHhhhh
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE----------------TKEVFEEISRYWK 185 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~----------------~~~vl~~i~~~l~ 185 (333)
..+.. +|. +++++||+||+++|... +.++++++.++.
T Consensus 55 ------------------------~~i~~-~d~-~~~~~aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~- 107 (319)
T 1a5z_A 55 ------------------------ANIYA-GDY-ADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYA- 107 (319)
T ss_dssp ------------------------CEEEE-CCG-GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred ------------------------cEEEe-CCH-HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-
Confidence 13444 354 56889999999999633 577888888774
Q ss_pred ccCCCCEEEEeeecCcc
Q 019978 186 ERITVPVIISLAKGVEA 202 (333)
Q Consensus 186 ~~~~~~~Ivs~~kGi~~ 202 (333)
+ ++.++.++|++..
T Consensus 108 ~---~~~ii~~tNp~~~ 121 (319)
T 1a5z_A 108 P---DSIVIVVTNPVDV 121 (319)
T ss_dssp T---TCEEEECSSSHHH
T ss_pred C---CeEEEEeCCcHHH
Confidence 3 5778888887664
No 96
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=98.71 E-value=4.1e-08 Score=89.69 Aligned_cols=128 Identities=9% Similarity=0.083 Sum_probs=87.1
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
..|||+|||+|.||++||..|.++ | ++|+.|++.+
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~-G-----~~V~~~~~~~--------------------------------------- 39 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSV-G-----HYVTVLHAPE--------------------------------------- 39 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHT-T-----CEEEECSSGG---------------------------------------
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHC-C-----CEEEEecCHH---------------------------------------
Confidence 458999999999999999999999 8 9999887631
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCc
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~ 201 (333)
+ +.++| |+|||.+.+.++++++.+++++ +++|++++..+.
T Consensus 40 ----------------------------------~-~~~aD--ilavP~~ai~~vl~~l~~~l~~---g~ivvd~sgs~~ 79 (232)
T 3dfu_A 40 ----------------------------------D-IRDFE--LVVIDAHGVEGYVEKLSAFARR---GQMFLHTSLTHG 79 (232)
T ss_dssp ----------------------------------G-GGGCS--EEEECSSCHHHHHHHHHTTCCT---TCEEEECCSSCC
T ss_pred ----------------------------------H-hccCC--EEEEcHHHHHHHHHHHHHhcCC---CCEEEEECCcCH
Confidence 0 23578 9999999999999999998876 788887653222
Q ss_pred ccccCCccCCCHHHHHHhHhCCCCCcEEEE-cCCCchHHHhccCceeEEEeCChhhHHHHHHHhCCCCeEEEecCC
Q 019978 202 AELEAVPRIITPTQMINRATGVPIENILYL-GGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGD 276 (333)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~~~~~vl-~GP~~a~ev~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~s~D 276 (333)
.+ +++...... ..++ .-|-+ +. ...+...+++..+.++.++...|-+++..++
T Consensus 80 ~~------------vl~~~~~~g---~~fvg~HPm~------g~-~~~i~a~d~~a~~~l~~L~~~lG~~vv~~~~ 133 (232)
T 3dfu_A 80 IT------------VMDPLETSG---GIVMSAHPIG------QD-RWVASALDELGETIVGLLVGELGGSIVEIAD 133 (232)
T ss_dssp GG------------GGHHHHHTT---CEEEEEEEEE------TT-EEEEEESSHHHHHHHHHHHHHTTCEECCCCG
T ss_pred HH------------HHHHHHhCC---CcEEEeeeCC------CC-ceeeeCCCHHHHHHHHHHHHHhCCEEEEeCH
Confidence 21 223222111 1122 12322 21 2222344666788899999988888776554
No 97
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=98.69 E-value=7e-08 Score=91.29 Aligned_cols=107 Identities=16% Similarity=0.129 Sum_probs=71.4
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
|||+|||+|+||+++|..|+.+ +. +++|++|++++++++.+.. -+.. ..+..
T Consensus 1 mkI~VIGaG~vG~~la~~la~~-~~---g~~V~l~D~~~~~~~~~~~-----~l~~-------------~~~~~------ 52 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEK-QL---ARELVLLDVVEGIPQGKAL-----DMYE-------------SGPVG------ 52 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TC---CSEEEEECSSSSHHHHHHH-----HHHT-------------THHHH------
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CC---CCEEEEEeCChhHHHHHHH-----hHHh-------------hhhcc------
Confidence 7999999999999999999985 21 1899999999876643210 0000 00000
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch----------------hHHHHHHHHHhhhhcc
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------------ETKEVFEEISRYWKER 187 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~----------------~~~~vl~~i~~~l~~~ 187 (333)
.. ..++..++|.++ +++||+||+++|.. .+.++++.+.++. +
T Consensus 53 -~~------------------~~~i~~t~d~~~-l~~aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~- 110 (310)
T 1guz_A 53 -LF------------------DTKVTGSNDYAD-TANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHS-K- 110 (310)
T ss_dssp -TC------------------CCEEEEESCGGG-GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-S-
T ss_pred -cC------------------CcEEEECCCHHH-HCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-C-
Confidence 00 014677788866 89999999999652 2356666666664 3
Q ss_pred CCCCEEEEeeecCcc
Q 019978 188 ITVPVIISLAKGVEA 202 (333)
Q Consensus 188 ~~~~~Ivs~~kGi~~ 202 (333)
+..++.++|.+..
T Consensus 111 --~~~viv~tNP~~~ 123 (310)
T 1guz_A 111 --NPIIIVVSNPLDI 123 (310)
T ss_dssp --SCEEEECCSSHHH
T ss_pred --CcEEEEEcCchHH
Confidence 5677777876553
No 98
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=98.69 E-value=1.1e-07 Score=90.61 Aligned_cols=105 Identities=16% Similarity=0.165 Sum_probs=73.1
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCe-eEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~-~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
.+|||+|||+|.||+++|..|+.. | + +|.+||+++++++.... .+... +...
T Consensus 3 ~~~kI~VIGaG~vG~~ia~~la~~-g-----~~~v~L~Di~~~~l~~~~~-----~l~~~-------------~~~~--- 55 (322)
T 1t2d_A 3 PKAKIVLVGSGMIGGVMATLIVQK-N-----LGDVVLFDIVKNMPHGKAL-----DTSHT-------------NVMA--- 55 (322)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECSSSSHHHHHHH-----HHHTH-------------HHHH---
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-C-----CCeEEEEeCCHHHHHHHHH-----HHHhh-------------hhhc---
Confidence 357999999999999999999998 7 6 89999999876642110 01100 0000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEec--Cch-------------------hHHHHHHH
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL--PST-------------------ETKEVFEE 179 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaV--ps~-------------------~~~~vl~~ 179 (333)
.. ..+++.++|. +++++||+||+++ |.. .+.+++++
T Consensus 56 ----~~------------------~~~i~~t~d~-~al~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~ 112 (322)
T 1t2d_A 56 ----YS------------------NCKVSGSNTY-DDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGH 112 (322)
T ss_dssp ----TC------------------CCCEEEECCG-GGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHH
T ss_pred ----CC------------------CcEEEECCCH-HHhCCCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHH
Confidence 00 0257787888 7799999999998 531 47777888
Q ss_pred HHhhhhccCCCCEEEEeeecC
Q 019978 180 ISRYWKERITVPVIISLAKGV 200 (333)
Q Consensus 180 i~~~l~~~~~~~~Ivs~~kGi 200 (333)
+.++. + ++.++..+|-.
T Consensus 113 i~~~~-p---~a~iiv~tNP~ 129 (322)
T 1t2d_A 113 IKKNC-P---NAFIIVVTNPV 129 (322)
T ss_dssp HHHHC-T---TSEEEECSSSH
T ss_pred HHHHC-C---CeEEEEecCCh
Confidence 88776 4 56776666643
No 99
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=98.67 E-value=5.1e-08 Score=92.04 Aligned_cols=103 Identities=17% Similarity=0.122 Sum_probs=68.7
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCe--eEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~--~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
|||+|||+|.||+++|..|+.+ | + +|.+||+++++++.. ...-. + ..+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~-g-----~~~eV~L~D~~~~~~~~~-------~~~l~--------~---~~~~----- 51 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLR-G-----SCSELVLVDRDEDRAQAE-------AEDIA--------H---AAPV----- 51 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CCSEEEEECSSHHHHHHH-------HHHHT--------T---SCCT-----
T ss_pred CEEEEECCCHHHHHHHHHHHhC-C-----CCCEEEEEeCCHHHHHHH-------HHhhh--------h---hhhh-----
Confidence 6999999999999999999998 8 7 899999997644310 00000 0 0000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch----------------hHHHHHHHHHhhhh
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------------ETKEVFEEISRYWK 185 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~----------------~~~~vl~~i~~~l~ 185 (333)
++ ...+.. ++. +++++||+||++++.. .++++++++.++.
T Consensus 52 ----~~-----------------~~~i~~-~~~-~a~~~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~- 107 (304)
T 2v6b_A 52 ----SH-----------------GTRVWH-GGH-SELADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAA- 107 (304)
T ss_dssp ----TS-----------------CCEEEE-ECG-GGGTTCSEEEECC------------CHHHHHHHHHHHHHHHHHHC-
T ss_pred ----cC-----------------CeEEEE-CCH-HHhCCCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhC-
Confidence 00 013443 454 5789999999999533 3477888888874
Q ss_pred ccCCCCEEEEeeecCcc
Q 019978 186 ERITVPVIISLAKGVEA 202 (333)
Q Consensus 186 ~~~~~~~Ivs~~kGi~~ 202 (333)
+ ++.++.++|+...
T Consensus 108 p---~~~vi~~tNP~~~ 121 (304)
T 2v6b_A 108 P---DAVLLVTSNPVDL 121 (304)
T ss_dssp S---SSEEEECSSSHHH
T ss_pred C---CeEEEEecCchHH
Confidence 4 6777778887664
No 100
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=98.63 E-value=1.1e-07 Score=89.70 Aligned_cols=104 Identities=11% Similarity=0.019 Sum_probs=68.6
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCe--eEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~--~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
|||+|||+|.||+++|..|+.+ | + +|.+||+++++++.. .++-.+ .++ +++
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~-~-----~~~~v~L~D~~~~~~~g~-------~~dl~~-------~~~-~~~------ 53 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLN-L-----DVDEIALVDIAEDLAVGE-------AMDLAH-------AAA-GID------ 53 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-S-----CCSEEEEECSSHHHHHHH-------HHHHHH-------HHH-TTT------
T ss_pred CEEEEECCCHHHHHHHHHHHhC-C-----CCCeEEEEECChHHHHHH-------HHHHHh-------hhh-hcC------
Confidence 7999999999999999999998 7 6 899999998765311 011100 011 111
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch----------------hHHHHHHHHHhhhh
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------------ETKEVFEEISRYWK 185 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~----------------~~~~vl~~i~~~l~ 185 (333)
.+ ..+..++| .+++++||+||++.... .++++.+++.++ .
T Consensus 54 ----~~------------------~~i~~t~d-~~a~~~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~ 109 (294)
T 1oju_A 54 ----KY------------------PKIVGGAD-YSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-A 109 (294)
T ss_dssp ----CC------------------CEEEEESC-GGGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT-S
T ss_pred ----CC------------------CEEEEeCC-HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-C
Confidence 00 14677778 77899999999986321 244555555555 3
Q ss_pred ccCCCCEEEEeeecCc
Q 019978 186 ERITVPVIISLAKGVE 201 (333)
Q Consensus 186 ~~~~~~~Ivs~~kGi~ 201 (333)
+ +..++..+|-+.
T Consensus 110 p---~a~iivvsNPvd 122 (294)
T 1oju_A 110 P---ESKILVVTNPMD 122 (294)
T ss_dssp T---TCEEEECSSSHH
T ss_pred C---CeEEEEeCCcch
Confidence 3 577777776443
No 101
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=98.61 E-value=7.4e-08 Score=92.34 Aligned_cols=92 Identities=18% Similarity=0.256 Sum_probs=71.1
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
-++|+|||+|.||.++|..+... | ++|.+|+|+++..+
T Consensus 164 g~~vgIIG~G~iG~~vA~~l~~~-G-----~~V~~~dr~~~~~~------------------------------------ 201 (333)
T 3ba1_A 164 GKRVGIIGLGRIGLAVAERAEAF-D-----CPISYFSRSKKPNT------------------------------------ 201 (333)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTT-T-----CCEEEECSSCCTTC------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-C-----CEEEEECCCchhcc------------------------------------
Confidence 47999999999999999999988 8 89999999875210
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHhhhhccCCCCEEEEeeecC
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-~~~~vl-~~i~~~l~~~~~~~~Ivs~~kGi 200 (333)
.....+++++++.++|+|++++|.. .++.++ ++..+.+++ ++++|+++.|-
T Consensus 202 ------------------------g~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~---gailIn~srG~ 254 (333)
T 3ba1_A 202 ------------------------NYTYYGSVVELASNSDILVVACPLTPETTHIINREVIDALGP---KGVLINIGRGP 254 (333)
T ss_dssp ------------------------CSEEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCT---TCEEEECSCGG
T ss_pred ------------------------CceecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCC---CCEEEECCCCc
Confidence 1223467888889999999999985 455555 334456666 78999999886
Q ss_pred ccc
Q 019978 201 EAE 203 (333)
Q Consensus 201 ~~~ 203 (333)
...
T Consensus 255 ~vd 257 (333)
T 3ba1_A 255 HVD 257 (333)
T ss_dssp GBC
T ss_pred hhC
Confidence 654
No 102
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=98.59 E-value=1.1e-07 Score=95.38 Aligned_cols=111 Identities=15% Similarity=0.229 Sum_probs=74.8
Q ss_pred ceEEEECCCHH-HHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 44 LRIVGVGAGAW-GSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 44 ~kI~IIGaG~m-G~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
|||+|||+|+| |.++|..|+.+...+. .++|.|||+++++++.++. + . . .+++..
T Consensus 29 ~KIaVIGaGsv~~~ala~~L~~~~~~l~-~~eV~L~Di~~e~~~~~~~--~---~-~------------~~l~~~----- 84 (472)
T 1u8x_X 29 FSIVIAGGGSTFTPGIVLMLLDHLEEFP-IRKLKLYDNDKERQDRIAG--A---C-D------------VFIREK----- 84 (472)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTTTTSC-EEEEEEECSCHHHHHHHHH--H---H-H------------HHHHHH-----
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCCCCC-CCEEEEEeCCHHHHHHHHH--H---H-H------------HHhccC-----
Confidence 69999999999 7778877776510111 1789999999987654321 0 0 0 122221
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh------------------------------
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE------------------------------ 172 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~------------------------------ 172 (333)
.++ ..+..++|+++++++||+||+++|+..
T Consensus 85 --~~~------------------~~I~~t~D~~eal~~AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~ 144 (472)
T 1u8x_X 85 --APD------------------IEFAATTDPEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYG 144 (472)
T ss_dssp --CTT------------------SEEEEESCHHHHHSSCSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHH
T ss_pred --CCC------------------CEEEEECCHHHHHcCCCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHH
Confidence 111 257888999889999999999999832
Q ss_pred ------HHHHHHHHHhhhhccCCCCEEEEeeecCcc
Q 019978 173 ------TKEVFEEISRYWKERITVPVIISLAKGVEA 202 (333)
Q Consensus 173 ------~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~~ 202 (333)
+.++++++.++.+ ++.++..+|-+..
T Consensus 145 ~rni~i~~~i~~~i~~~~P----~A~ii~~TNPvdi 176 (472)
T 1u8x_X 145 MRSIGGVLEILDYMEKYSP----DAWMLNYSNPAAI 176 (472)
T ss_dssp HHHHHHHHHHHHHHHHHCT----TCEEEECCSCHHH
T ss_pred hhhHHHHHHHHHHHHHHCC----CeEEEEeCCcHHH
Confidence 4566666666654 6788888877654
No 103
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=98.55 E-value=1.7e-07 Score=93.99 Aligned_cols=83 Identities=22% Similarity=0.282 Sum_probs=56.3
Q ss_pred CceEEEECCCH--HHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 43 PLRIVGVGAGA--WGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 43 ~~kI~IIGaG~--mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
+|||+|||+|+ ||+++|..|+...+ +. +++|.|||+++++++.+... .. .+++..
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~-l~-~~eV~L~Di~~e~l~~~~~~-----~~-------------~~l~~~--- 59 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPG-LS-GSTVTLMDIDEERLDAILTI-----AK-------------KYVEEV--- 59 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGG-GT-TCEEEEECSCHHHHHHHHHH-----HH-------------HHHHHT---
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCc-CC-CCEEEEEeCCHHHHHHHHHH-----HH-------------HHhccC---
Confidence 47999999999 47888888874311 10 17999999999876543210 00 112211
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS 170 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps 170 (333)
..+ .+++.++|+++++++||+||+++|+
T Consensus 60 ----~~~------------------~~I~~ttD~~eal~dAD~VIiaagv 87 (480)
T 1obb_A 60 ----GAD------------------LKFEKTMNLDDVIIDADFVINTAMV 87 (480)
T ss_dssp ----TCC------------------CEEEEESCHHHHHTTCSEEEECCCT
T ss_pred ----CCC------------------cEEEEECCHHHHhCCCCEEEECCCc
Confidence 011 2588889998889999999999975
No 104
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=98.51 E-value=3.1e-07 Score=88.32 Aligned_cols=92 Identities=16% Similarity=0.264 Sum_probs=63.6
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
-++|+|||.|.||.++|..+... | ++|..|+|+++...
T Consensus 171 gktiGIIGlG~IG~~vA~~l~~~-G-----~~V~~~dr~~~~~~------------------------------------ 208 (340)
T 4dgs_A 171 GKRIGVLGLGQIGRALASRAEAF-G-----MSVRYWNRSTLSGV------------------------------------ 208 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEECSSCCTTS------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-C-----CEEEEEcCCccccc------------------------------------
Confidence 37999999999999999999887 8 89999999874210
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc-hhHHHHH-HHHHhhhhccCCCCEEEEeeecC
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-TETKEVF-EEISRYWKERITVPVIISLAKGV 200 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps-~~~~~vl-~~i~~~l~~~~~~~~Ivs~~kGi 200 (333)
......+++++++.||+|++++|. ..++.++ ++....+++ ++++|.++.|=
T Consensus 209 ------------------------~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~---gailIN~aRG~ 261 (340)
T 4dgs_A 209 ------------------------DWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGP---EGIVVNVARGN 261 (340)
T ss_dssp ------------------------CCEECSSHHHHHHTCSEEEECC----------CHHHHHHTTT---TCEEEECSCC-
T ss_pred ------------------------CceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCC---CCEEEECCCCc
Confidence 122346788889999999999994 4566665 455566776 78999998884
Q ss_pred ccc
Q 019978 201 EAE 203 (333)
Q Consensus 201 ~~~ 203 (333)
...
T Consensus 262 vvd 264 (340)
T 4dgs_A 262 VVD 264 (340)
T ss_dssp ---
T ss_pred ccC
Confidence 443
No 105
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=98.51 E-value=5.1e-07 Score=85.39 Aligned_cols=107 Identities=18% Similarity=0.264 Sum_probs=68.6
Q ss_pred hhccCCCCCceEEEECCCHHHHHHHHHHHHhcCCCCCCe--eEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhccc
Q 019978 35 LMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCA 112 (333)
Q Consensus 35 ~~~~~~~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~--~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~ 112 (333)
+-+..+..++||+|||+|.||+++|..++.. | + +|.|+|++++ +... . .. +.+
T Consensus 6 ~~~~~~~~~~kV~ViGaG~vG~~~a~~l~~~-g-----~~~ev~L~Di~~~-~~g~---a----~d-----l~~------ 60 (303)
T 2i6t_A 6 WANHENKTVNKITVVGGGELGIACTLAISAK-G-----IADRLVLLDLSEG-TKGA---T----MD-----LEI------ 60 (303)
T ss_dssp --------CCEEEEECCSHHHHHHHHHHHHH-T-----CCSEEEEECCC------C---H----HH-----HHH------
T ss_pred cccccCCCCCEEEEECCCHHHHHHHHHHHhc-C-----CCCEEEEEcCCcc-hHHH---H----HH-----Hhh------
Confidence 3444455568999999999999999999998 7 6 8999999985 3210 0 00 000
Q ss_pred ccchhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEec-------------Cc--hhHHHHH
Q 019978 113 YLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL-------------PS--TETKEVF 177 (333)
Q Consensus 113 ~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaV-------------ps--~~~~~vl 177 (333)
+. . .+++.++|. +++++||+||+++ +. ..+.+++
T Consensus 61 -~~----------~-------------------~~i~~t~d~-~~l~~aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~ 109 (303)
T 2i6t_A 61 -FN----------L-------------------PNVEISKDL-SASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALV 109 (303)
T ss_dssp -HT----------C-------------------TTEEEESCG-GGGTTCSEEEECCCC----CCHHHHHHHHHHHHHHHH
T ss_pred -hc----------C-------------------CCeEEeCCH-HHHCCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 00 0 146777888 6789999999997 22 2477888
Q ss_pred HHHHhhhhccCCCCEEEEeeecCc
Q 019978 178 EEISRYWKERITVPVIISLAKGVE 201 (333)
Q Consensus 178 ~~i~~~l~~~~~~~~Ivs~~kGi~ 201 (333)
+++.++. + +.+++.++|-+.
T Consensus 110 ~~i~~~~-p---~a~iiv~sNP~~ 129 (303)
T 2i6t_A 110 PALGHYS-Q---HSVLLVASQPVE 129 (303)
T ss_dssp HHHHHHT-T---TCEEEECSSSHH
T ss_pred HHHHHhC-C---CeEEEEcCChHH
Confidence 8888876 4 577777777443
No 106
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=98.48 E-value=1.6e-07 Score=89.63 Aligned_cols=95 Identities=18% Similarity=0.217 Sum_probs=69.6
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
-++|+|||+|.||.++|..++.. | ++|++|+|+++..+.. ..
T Consensus 155 g~~vgIIG~G~iG~~iA~~l~~~-G-----~~V~~~d~~~~~~~~~--------------------------~~------ 196 (330)
T 2gcg_A 155 QSTVGIIGLGRIGQAIARRLKPF-G-----VQRFLYTGRQPRPEEA--------------------------AE------ 196 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGG-T-----CCEEEEESSSCCHHHH--------------------------HT------
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-C-----CEEEEECCCCcchhHH--------------------------Hh------
Confidence 47999999999999999999988 8 8999999987643210 00
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHhhhhccCCCCEEEEeeecC
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-~~~~vl-~~i~~~l~~~~~~~~Ivs~~kGi 200 (333)
..+... ++++++.++|+|++++|.. .++.++ +++.+.+++ ++++|+++.|-
T Consensus 197 -----------------------~g~~~~-~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~---gailIn~srg~ 249 (330)
T 2gcg_A 197 -----------------------FQAEFV-STPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKE---TAVFINISRGD 249 (330)
T ss_dssp -----------------------TTCEEC-CHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCT---TCEEEECSCGG
T ss_pred -----------------------cCceeC-CHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCC---CcEEEECCCCc
Confidence 023333 7778889999999999975 344444 345556666 78888888774
Q ss_pred cc
Q 019978 201 EA 202 (333)
Q Consensus 201 ~~ 202 (333)
..
T Consensus 250 ~v 251 (330)
T 2gcg_A 250 VV 251 (330)
T ss_dssp GB
T ss_pred cc
Confidence 43
No 107
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.48 E-value=3.3e-07 Score=74.66 Aligned_cols=38 Identities=18% Similarity=0.189 Sum_probs=33.7
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
.|+|+|+|+|.+|..++..|.+. | ++|++++++++.++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~-g-----~~v~~~d~~~~~~~ 41 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEK-G-----HDIVLIDIDKDICK 41 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CeEEEEECCHHHHH
Confidence 37999999999999999999998 8 99999999876544
No 108
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.48 E-value=1.1e-06 Score=73.98 Aligned_cols=103 Identities=20% Similarity=0.180 Sum_probs=66.9
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
++|.|+|+|.||..++..|... | ++|+++++++++++.++. .. +.....+ +
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~-g-----~~V~vid~~~~~~~~~~~--------~~---------g~~~~~~------d 70 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSS-G-----HSVVVVDKNEYAFHRLNS--------EF---------SGFTVVG------D 70 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESCGGGGGGSCT--------TC---------CSEEEES------C
T ss_pred CcEEEECCCHHHHHHHHHHHhC-C-----CeEEEEECCHHHHHHHHh--------cC---------CCcEEEe------c
Confidence 7999999999999999999998 8 899999999876543210 00 0000000 0
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHH-hcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCcc
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEA-VWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea-~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~~ 202 (333)
. .. ...+.++ ++++|+||+++|+......+..+.+.+.+ ...++..+++...
T Consensus 71 --~-------------------~~---~~~l~~~~~~~ad~Vi~~~~~~~~~~~~~~~~~~~~~---~~~iv~~~~~~~~ 123 (155)
T 2g1u_A 71 --A-------------------AE---FETLKECGMEKADMVFAFTNDDSTNFFISMNARYMFN---VENVIARVYDPEK 123 (155)
T ss_dssp --T-------------------TS---HHHHHTTTGGGCSEEEECSSCHHHHHHHHHHHHHTSC---CSEEEEECSSGGG
T ss_pred --C-------------------CC---HHHHHHcCcccCCEEEEEeCCcHHHHHHHHHHHHHCC---CCeEEEEECCHHH
Confidence 0 00 0112222 56899999999998777666666665443 4567776666443
No 109
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=98.48 E-value=1.7e-07 Score=89.71 Aligned_cols=96 Identities=19% Similarity=0.305 Sum_probs=71.9
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
..++|+|||+|.||..+|..++.. | ++|.+|+|+++. +.. .+ .
T Consensus 149 ~g~~vgIIG~G~iG~~iA~~l~~~-G-----~~V~~~d~~~~~-~~~---------~~-----------------~---- 191 (334)
T 2dbq_A 149 YGKTIGIIGLGRIGQAIAKRAKGF-N-----MRILYYSRTRKE-EVE---------RE-----------------L---- 191 (334)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCH-HHH---------HH-----------------H----
T ss_pred CCCEEEEEccCHHHHHHHHHHHhC-C-----CEEEEECCCcch-hhH---------hh-----------------c----
Confidence 347999999999999999999988 8 899999998864 210 00 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh-HHHHH-HHHHhhhhccCCCCEEEEeeec
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-TKEVF-EEISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~-~~~vl-~~i~~~l~~~~~~~~Ivs~~kG 199 (333)
.+.. +++++++.++|+|++++|... ++.++ +++.+.+++ ++++|++++|
T Consensus 192 -------------------------g~~~-~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~mk~---~ailIn~srg 242 (334)
T 2dbq_A 192 -------------------------NAEF-KPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKK---TAILINIARG 242 (334)
T ss_dssp -------------------------CCEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCT---TCEEEECSCG
T ss_pred -------------------------Cccc-CCHHHHHhhCCEEEECCCCChHHHHhhCHHHHhcCCC---CcEEEECCCC
Confidence 1222 467788899999999999875 55555 355566776 7889999888
Q ss_pred Cccc
Q 019978 200 VEAE 203 (333)
Q Consensus 200 i~~~ 203 (333)
-...
T Consensus 243 ~~v~ 246 (334)
T 2dbq_A 243 KVVD 246 (334)
T ss_dssp GGBC
T ss_pred cccC
Confidence 6554
No 110
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=98.46 E-value=2e-07 Score=87.74 Aligned_cols=92 Identities=12% Similarity=0.173 Sum_probs=70.1
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
-++|+|||.|.||..+|..+... | ++|+.|+|+++..+
T Consensus 122 g~tvGIIGlG~IG~~vA~~l~~~-G-----~~V~~~dr~~~~~~------------------------------------ 159 (290)
T 3gvx_A 122 GKALGILGYGGIGRRVAHLAKAF-G-----MRVIAYTRSSVDQN------------------------------------ 159 (290)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-T-----CEEEEECSSCCCTT------------------------------------
T ss_pred cchheeeccCchhHHHHHHHHhh-C-----cEEEEEeccccccc------------------------------------
Confidence 37999999999999999999988 8 99999999875321
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc-hhHHHHH-HHHHhhhhccCCCCEEEEeeecC
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-TETKEVF-EEISRYWKERITVPVIISLAKGV 200 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps-~~~~~vl-~~i~~~l~~~~~~~~Ivs~~kGi 200 (333)
.....++++++++.+|+|++++|. ..++.++ ++....+++ ++++|.++.|-
T Consensus 160 ------------------------~~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~---gailIN~aRG~ 212 (290)
T 3gvx_A 160 ------------------------VDVISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARK---NLTIVNVARAD 212 (290)
T ss_dssp ------------------------CSEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCT---TCEEEECSCGG
T ss_pred ------------------------cccccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhhhc---CceEEEeehhc
Confidence 122345788889999999999995 3444444 445556676 78999988775
Q ss_pred ccc
Q 019978 201 EAE 203 (333)
Q Consensus 201 ~~~ 203 (333)
...
T Consensus 213 ~vd 215 (290)
T 3gvx_A 213 VVS 215 (290)
T ss_dssp GBC
T ss_pred ccC
Confidence 543
No 111
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=98.46 E-value=3.7e-07 Score=90.87 Aligned_cols=111 Identities=13% Similarity=0.154 Sum_probs=75.1
Q ss_pred CceEEEECCCHH-HHHHHHHHHHh-cCCCCCCeeEEEEecCC--cchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhh
Q 019978 43 PLRIVGVGAGAW-GSVFTAMLQDS-YGYLRDKVLIRIWRRPG--RSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (333)
Q Consensus 43 ~~kI~IIGaG~m-G~alA~~La~~-~G~~~~~~~V~l~~r~~--~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~ 118 (333)
.|||+|||+|+| |.+++..|+.+ .+ +. .++|.|||+++ ++++.+.. + .. .+++..
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~-l~-~~ev~L~Di~~~~e~~~~~~~--~----~~------------~~~~~~- 65 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHE-LP-VGELWLVDIPEGKEKLEIVGA--L----AK------------RMVEKA- 65 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTT-CC-EEEEEEECCGGGHHHHHHHHH--H----HH------------HHHHHT-
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCC-CC-CCEEEEEEcCCChHHHHHHHH--H----HH------------HHHhhc-
Confidence 479999999999 88888888872 02 11 17899999998 77654221 0 00 111111
Q ss_pred hhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh--------------------------
Q 019978 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-------------------------- 172 (333)
Q Consensus 119 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~-------------------------- 172 (333)
..+ ..++.++|.++++++||+||++++...
T Consensus 66 ------~~~------------------~~i~~t~D~~eal~gAD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~gg 121 (450)
T 1s6y_A 66 ------GVP------------------IEIHLTLDRRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGG 121 (450)
T ss_dssp ------TCC------------------CEEEEESCHHHHHTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHH
T ss_pred ------CCC------------------cEEEEeCCHHHHhCCCCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccch
Confidence 011 257788999889999999999999632
Q ss_pred ----------HHHHHHHHHhhhhccCCCCEEEEeeecCcc
Q 019978 173 ----------TKEVFEEISRYWKERITVPVIISLAKGVEA 202 (333)
Q Consensus 173 ----------~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~~ 202 (333)
+.++++++.++.+ ++.++..+|-+..
T Consensus 122 i~~~~rni~i~~~i~~~i~~~~P----~a~ii~~tNPvdi 157 (450)
T 1s6y_A 122 LFKGLRTIPVILDIIRDMEELCP----DAWLINFTNPAGM 157 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCT----TCEEEECSSSHHH
T ss_pred HHHHhhhHHHHHHHHHHHHHHCC----CeEEEEeCCcHHH
Confidence 4566666666654 6788888877653
No 112
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=98.42 E-value=1.9e-06 Score=82.33 Aligned_cols=105 Identities=12% Similarity=0.187 Sum_probs=70.3
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCe-eEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~-~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
+|||+|||+|.||+++|..|+.+ | + +|.+||+++++++... ++ +++ ...+..
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~-~-----~~~v~L~Di~~~~~~g~~-------~d-----l~~----~~~~~~----- 59 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLK-E-----LGDVVLFDIAEGTPQGKG-------LD-----IAE----SSPVDG----- 59 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECSSSSHHHHHH-------HH-----HHH----HHHHHT-----
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CCeEEEEeCCchhHHHHH-------HH-----Hhc----hhhhcC-----
Confidence 47999999999999999999998 7 7 9999999997654211 00 010 000000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc----------------hhHHHHHHHHHhhhh
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS----------------TETKEVFEEISRYWK 185 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps----------------~~~~~vl~~i~~~l~ 185 (333)
.+ ..+..++|. +++++||+||++... ..++++.+.+.++.
T Consensus 60 ----~~------------------~~v~~t~d~-~a~~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~- 115 (324)
T 3gvi_A 60 ----FD------------------AKFTGANDY-AAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYA- 115 (324)
T ss_dssp ----CC------------------CCEEEESSG-GGGTTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHC-
T ss_pred ----CC------------------CEEEEeCCH-HHHCCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHC-
Confidence 00 157777787 689999999998632 13455666666654
Q ss_pred ccCCCCEEEEeeecCc
Q 019978 186 ERITVPVIISLAKGVE 201 (333)
Q Consensus 186 ~~~~~~~Ivs~~kGi~ 201 (333)
+ +..++.++|-..
T Consensus 116 p---~a~iivvtNPvd 128 (324)
T 3gvi_A 116 P---EAFVICITNPLD 128 (324)
T ss_dssp T---TCEEEECCSSHH
T ss_pred C---CeEEEecCCCcH
Confidence 3 577887776544
No 113
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=98.40 E-value=9.2e-07 Score=88.02 Aligned_cols=106 Identities=17% Similarity=0.232 Sum_probs=74.9
Q ss_pred ceEEEECCCH--HHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 44 LRIVGVGAGA--WGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 44 ~kI~IIGaG~--mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
|||+|||+|+ ||.+++..|+.. ..+ . .+|.+||++++++++++. +. ..+..
T Consensus 6 ~KIaVIGaGs~g~g~~la~~l~~~-~~~-~-geV~L~Di~~e~le~~~~------~~-------------~~l~~----- 58 (450)
T 3fef_A 6 IKIAYIGGGSQGWARSLMSDLSID-ERM-S-GTVALYDLDFEAAQKNEV------IG-------------NHSGN----- 58 (450)
T ss_dssp EEEEEETTTCSSHHHHHHHHHHHC-SSC-C-EEEEEECSSHHHHHHHHH------HH-------------TTSTT-----
T ss_pred CEEEEECCChhHhHHHHHHHHHhc-ccc-C-CeEEEEeCCHHHHHHHHH------HH-------------HHHhc-----
Confidence 7999999999 689999999874 222 2 389999999877654321 00 11110
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch------------------------------
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST------------------------------ 171 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~------------------------------ 171 (333)
.+ .++++|+|+++|+++||+||++++..
T Consensus 59 ----~~------------------~~I~~TtD~~eAl~dADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi 116 (450)
T 3fef_A 59 ----GR------------------WRYEAVSTLKKALSAADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGI 116 (450)
T ss_dssp ----SC------------------EEEEEESSHHHHHTTCSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHH
T ss_pred ----cC------------------CeEEEECCHHHHhcCCCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchh
Confidence 00 25889999999999999999999741
Q ss_pred --------hHHHHHHHHHhhhhccCCCCEEEEeeecCcc
Q 019978 172 --------ETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (333)
Q Consensus 172 --------~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~~ 202 (333)
.+.++++++.++.+ +..++..+|-+..
T Consensus 117 ~~alr~~~i~~~i~~~i~~~~p----~a~~i~~tNPvdi 151 (450)
T 3fef_A 117 IRGLRAVPIFAEIARAIRDYAP----ESWVINYTNPMSV 151 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCT----TSEEEECCSSHHH
T ss_pred hcccccHHHHHHHHHHHHHHCC----CeEEEEecCchHH
Confidence 15666666666643 6788888877654
No 114
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=98.39 E-value=1.7e-06 Score=81.81 Aligned_cols=104 Identities=13% Similarity=0.047 Sum_probs=68.7
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCe-eEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~-~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
|||+|||+|.||+.++..|+.. | + +|.++|+++++++... .-+.. .....
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~-g-----~~~v~L~Di~~~~~~g~~-----~dl~~-------------~~~~~----- 53 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAK-E-----LGDIVLLDIVEGVPQGKA-----LDLYE-------------ASPIE----- 53 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CSEEEEECSSSSHHHHHH-----HHHHT-------------THHHH-----
T ss_pred CEEEEECCCHHHHHHHHHHHHC-C-----CCeEEEEeCCccHHHHHH-----HhHHH-------------hHhhc-----
Confidence 6999999999999999999998 7 5 7999999987654210 00000 00000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc----------------hhHHHHHHHHHhhhhc
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS----------------TETKEVFEEISRYWKE 186 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps----------------~~~~~vl~~i~~~l~~ 186 (333)
. ...++..++|. +++++||+||+++.. ..+.++++.+.++. +
T Consensus 54 ---~-----------------~~~~i~~t~d~-~a~~~aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p 111 (309)
T 1ur5_A 54 ---G-----------------FDVRVTGTNNY-ADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLS-P 111 (309)
T ss_dssp ---T-----------------CCCCEEEESCG-GGGTTCSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGC-T
T ss_pred ---C-----------------CCeEEEECCCH-HHHCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-C
Confidence 0 00257777888 679999999999732 12445666666654 3
Q ss_pred cCCCCEEEEeeecCc
Q 019978 187 RITVPVIISLAKGVE 201 (333)
Q Consensus 187 ~~~~~~Ivs~~kGi~ 201 (333)
+..++..+|-+.
T Consensus 112 ---~a~vi~~tNPv~ 123 (309)
T 1ur5_A 112 ---NAVIIMVNNPLD 123 (309)
T ss_dssp ---TCEEEECCSSHH
T ss_pred ---CeEEEEcCCchH
Confidence 567766676443
No 115
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=98.38 E-value=1.6e-06 Score=82.21 Aligned_cols=42 Identities=21% Similarity=0.271 Sum_probs=34.4
Q ss_pred CCCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcch
Q 019978 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (333)
Q Consensus 40 ~~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (333)
+..++||+|||+|.||+++|..++.. |.. .+|.++|++++.+
T Consensus 3 ~~~~~kI~IIGaG~vG~sla~~l~~~-~~~---~ev~l~Di~~~~~ 44 (316)
T 1ldn_A 3 NNGGARVVVIGAGFVGASYVFALMNQ-GIA---DEIVLIDANESKA 44 (316)
T ss_dssp TTTSCEEEEECCSHHHHHHHHHHHHH-TCC---SEEEEECSSHHHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHhC-CCC---CEEEEEeCCcchH
Confidence 44568999999999999999999887 621 3899999997643
No 116
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=98.36 E-value=4.9e-07 Score=87.03 Aligned_cols=95 Identities=18% Similarity=0.173 Sum_probs=69.0
Q ss_pred CCceEEEECCCHHHHHHHHHHH-HhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQ-DSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La-~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
.-++|+|||+|.||..+|..+. .. | ++|.+|+|+++..+... + .
T Consensus 162 ~g~~vgIIG~G~IG~~vA~~l~~~~-G-----~~V~~~d~~~~~~~~~~---------~-----------------~--- 206 (348)
T 2w2k_A 162 RGHVLGAVGLGAIQKEIARKAVHGL-G-----MKLVYYDVAPADAETEK---------A-----------------L--- 206 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT-C-----CEEEEECSSCCCHHHHH---------H-----------------H---
T ss_pred CCCEEEEEEECHHHHHHHHHHHHhc-C-----CEEEEECCCCcchhhHh---------h-----------------c---
Confidence 3479999999999999999998 77 7 89999999876432100 0 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHhhhhccCCCCEEEEeee
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAK 198 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-~~~~vl-~~i~~~l~~~~~~~~Ivs~~k 198 (333)
.+...+++++.++++|+|++++|.. .+..++ +++.+.+++ ++++|+++.
T Consensus 207 --------------------------g~~~~~~l~ell~~aDvVil~vp~~~~t~~li~~~~l~~mk~---gailin~sr 257 (348)
T 2w2k_A 207 --------------------------GAERVDSLEELARRSDCVSVSVPYMKLTHHLIDEAFFAAMKP---GSRIVNTAR 257 (348)
T ss_dssp --------------------------TCEECSSHHHHHHHCSEEEECCCCSGGGTTCBCHHHHHHSCT---TEEEEECSC
T ss_pred --------------------------CcEEeCCHHHHhccCCEEEEeCCCChHHHHHhhHHHHhcCCC---CCEEEECCC
Confidence 1233357888889999999999975 355554 344455666 678888877
Q ss_pred cC
Q 019978 199 GV 200 (333)
Q Consensus 199 Gi 200 (333)
|-
T Consensus 258 g~ 259 (348)
T 2w2k_A 258 GP 259 (348)
T ss_dssp GG
T ss_pred Cc
Confidence 73
No 117
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=98.36 E-value=3.7e-07 Score=87.33 Aligned_cols=95 Identities=21% Similarity=0.347 Sum_probs=70.7
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
.-++|+|||+|.||.++|..+... | ++|.+|+|+++. +.. .+ .
T Consensus 145 ~g~~vgIIG~G~iG~~vA~~l~~~-G-----~~V~~~d~~~~~-~~~---------~~-----------------~---- 187 (333)
T 2d0i_A 145 YGKKVGILGMGAIGKAIARRLIPF-G-----VKLYYWSRHRKV-NVE---------KE-----------------L---- 187 (333)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGG-T-----CEEEEECSSCCH-HHH---------HH-----------------H----
T ss_pred CcCEEEEEccCHHHHHHHHHHHHC-C-----CEEEEECCCcch-hhh---------hh-----------------c----
Confidence 347999999999999999999888 8 899999998863 210 00 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHHH-HHHhhhhccCCCCEEEEeeec
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVFE-EISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-~~~~vl~-~i~~~l~~~~~~~~Ivs~~kG 199 (333)
.+.. .++++++.++|+|++++|.. .+..++. ++.+.+++ + ++|++++|
T Consensus 188 -------------------------g~~~-~~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~---g-ilin~srg 237 (333)
T 2d0i_A 188 -------------------------KARY-MDIDELLEKSDIVILALPLTRDTYHIINEERVKKLEG---K-YLVNIGRG 237 (333)
T ss_dssp -------------------------TEEE-CCHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBT---C-EEEECSCG
T ss_pred -------------------------Ccee-cCHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCC---C-EEEECCCC
Confidence 1223 36778888999999999987 5665553 34456676 7 88888888
Q ss_pred Cccc
Q 019978 200 VEAE 203 (333)
Q Consensus 200 i~~~ 203 (333)
-...
T Consensus 238 ~~vd 241 (333)
T 2d0i_A 238 ALVD 241 (333)
T ss_dssp GGBC
T ss_pred cccC
Confidence 6654
No 118
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=98.36 E-value=6.7e-07 Score=85.06 Aligned_cols=95 Identities=24% Similarity=0.380 Sum_probs=69.7
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
-++|+|||.|.||..+|..+... | ++|+.|+|+++..+. ..
T Consensus 139 g~tvGIiG~G~IG~~vA~~l~~~-G-----~~V~~~dr~~~~~~~--------------------------~~------- 179 (315)
T 3pp8_A 139 EFSVGIMGAGVLGAKVAESLQAW-G-----FPLRCWSRSRKSWPG--------------------------VE------- 179 (315)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTT-T-----CCEEEEESSCCCCTT--------------------------CE-------
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC-C-----CEEEEEcCCchhhhh--------------------------hh-------
Confidence 37999999999999999999887 8 899999998753211 00
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHhhhhccCCCCEEEEeeecC
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-~~~~vl-~~i~~~l~~~~~~~~Ivs~~kGi 200 (333)
......++++.+..+|+|++++|.. .++.++ ++....+++ ++++|.++.|=
T Consensus 180 ------------------------~~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~---gailIN~aRG~ 232 (315)
T 3pp8_A 180 ------------------------SYVGREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPD---GAYVLNLARGV 232 (315)
T ss_dssp ------------------------EEESHHHHHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCT---TEEEEECSCGG
T ss_pred ------------------------hhcccCCHHHHHhhCCEEEEecCCchhhhhhccHHHHhhCCC---CCEEEECCCCh
Confidence 0111256788899999999999953 555555 444555676 78899988775
Q ss_pred ccc
Q 019978 201 EAE 203 (333)
Q Consensus 201 ~~~ 203 (333)
...
T Consensus 233 ~vd 235 (315)
T 3pp8_A 233 HVQ 235 (315)
T ss_dssp GBC
T ss_pred hhh
Confidence 443
No 119
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=98.35 E-value=2e-06 Score=81.71 Aligned_cols=41 Identities=10% Similarity=-0.034 Sum_probs=31.9
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
.+|||+|||+|++|++++..|+.. |.+ .+|.++|+++++++
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~-~~~---~ev~L~Di~~~~~~ 46 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALR-QTA---NELVLIDVFKEKAI 46 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHT-TCS---SEEEEECCC---CC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCC---CEEEEEeCChHHHH
Confidence 458999999999999999999998 711 28999999987654
No 120
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.33 E-value=2.9e-07 Score=85.40 Aligned_cols=119 Identities=21% Similarity=0.240 Sum_probs=76.2
Q ss_pred cccccccccchHHhhhHHHHhhccCCCCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHH
Q 019978 15 NGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLF 94 (333)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~ 94 (333)
.|-+..+|-...--+.++++. +. .-..++|+|||+|.||.+++..|.+. | .+|++|+|++++++++.
T Consensus 103 ~g~~~g~nTd~~G~~~~l~~~-~~-~~~~~~v~iiGaG~~g~aia~~L~~~-g-----~~V~v~~r~~~~~~~l~----- 169 (275)
T 2hk9_A 103 NGKAYGYNTDWIGFLKSLKSL-IP-EVKEKSILVLGAGGASRAVIYALVKE-G-----AKVFLWNRTKEKAIKLA----- 169 (275)
T ss_dssp TTEEEEECCHHHHHHHHHHHH-CT-TGGGSEEEEECCSHHHHHHHHHHHHH-T-----CEEEEECSSHHHHHHHT-----
T ss_pred CCEEEeecCCHHHHHHHHHHh-CC-CcCCCEEEEECchHHHHHHHHHHHHc-C-----CEEEEEECCHHHHHHHH-----
Confidence 343444555455555555542 22 22347999999999999999999998 8 89999999976543210
Q ss_pred HHHhhhhhHHHHhhhcccccchhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHH
Q 019978 95 EVINSREDVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETK 174 (333)
Q Consensus 95 ~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~ 174 (333)
+ .+ .+.+.++++++++++|+||.|+|.....
T Consensus 170 ----~-------------------------~~--------------------g~~~~~~~~~~~~~aDiVi~atp~~~~~ 200 (275)
T 2hk9_A 170 ----Q-------------------------KF--------------------PLEVVNSPEEVIDKVQVIVNTTSVGLKD 200 (275)
T ss_dssp ----T-------------------------TS--------------------CEEECSCGGGTGGGCSEEEECSSTTSST
T ss_pred ----H-------------------------Hc--------------------CCeeehhHHhhhcCCCEEEEeCCCCCCC
Confidence 0 00 2334446777788999999999987543
Q ss_pred HHHHHH-HhhhhccCCCCEEEEeee
Q 019978 175 EVFEEI-SRYWKERITVPVIISLAK 198 (333)
Q Consensus 175 ~vl~~i-~~~l~~~~~~~~Ivs~~k 198 (333)
++...+ ...+++ +++++.+..
T Consensus 201 ~~~~~i~~~~l~~---g~~viDv~~ 222 (275)
T 2hk9_A 201 EDPEIFNYDLIKK---DHVVVDIIY 222 (275)
T ss_dssp TCCCSSCGGGCCT---TSEEEESSS
T ss_pred CCCCCCCHHHcCC---CCEEEEcCC
Confidence 211112 234555 677777654
No 121
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=98.28 E-value=1.2e-06 Score=77.98 Aligned_cols=102 Identities=14% Similarity=0.147 Sum_probs=68.4
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
|||.|+|+|.+|..+|..|.+. | ++|++++++++.++++.. .. +..... ++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~-g-----~~v~vid~~~~~~~~l~~--------~~---------~~~~i~------gd 51 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSR-K-----YGVVIINKDRELCEEFAK--------KL---------KATIIH------GD 51 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT-T-----CCEEEEESCHHHHHHHHH--------HS---------SSEEEE------SC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-C-----CeEEEEECCHHHHHHHHH--------Hc---------CCeEEE------cC
Confidence 7999999999999999999998 8 999999999876643211 00 000000 00
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHH-hcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCc
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEA-VWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea-~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~ 201 (333)
..-...++++ ++++|+||++++++.....+..+.+.+.+ ...+++.++.-.
T Consensus 52 ------------------------~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~---~~~iia~~~~~~ 103 (218)
T 3l4b_C 52 ------------------------GSHKEILRDAEVSKNDVVVILTPRDEVNLFIAQLVMKDFG---VKRVVSLVNDPG 103 (218)
T ss_dssp ------------------------TTSHHHHHHHTCCTTCEEEECCSCHHHHHHHHHHHHHTSC---CCEEEECCCSGG
T ss_pred ------------------------CCCHHHHHhcCcccCCEEEEecCCcHHHHHHHHHHHHHcC---CCeEEEEEeCcc
Confidence 0000123333 67899999999999888877777765443 456776665544
No 122
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.25 E-value=1e-06 Score=83.29 Aligned_cols=94 Identities=19% Similarity=0.332 Sum_probs=64.9
Q ss_pred CCCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhh
Q 019978 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (333)
Q Consensus 40 ~~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (333)
..+.++|+|||+|.||.+++..|.+..|. .+|.+|+|++++++++.. . +.
T Consensus 132 ~~~~~~igiIG~G~~g~~~a~~l~~~~g~----~~V~v~dr~~~~~~~l~~--------~--------------~~---- 181 (312)
T 2i99_A 132 PPSSEVLCILGAGVQAYSHYEIFTEQFSF----KEVRIWNRTKENAEKFAD--------T--------------VQ---- 181 (312)
T ss_dssp CTTCCEEEEECCSHHHHHHHHHHHHHCCC----SEEEEECSSHHHHHHHHH--------H--------------SS----
T ss_pred CCCCcEEEEECCcHHHHHHHHHHHHhCCC----cEEEEEcCCHHHHHHHHH--------H--------------hh----
Confidence 34568999999999999999999775230 489999999876543210 0 00
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEe
Q 019978 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISL 196 (333)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~ 196 (333)
..+...++++++++++|+|++++|+. ..++.. ..+++ +++|+++
T Consensus 182 --------------------------~~~~~~~~~~e~v~~aDiVi~atp~~--~~v~~~--~~l~~---g~~vi~~ 225 (312)
T 2i99_A 182 --------------------------GEVRVCSSVQEAVAGADVIITVTLAT--EPILFG--EWVKP---GAHINAV 225 (312)
T ss_dssp --------------------------SCCEECSSHHHHHTTCSEEEECCCCS--SCCBCG--GGSCT---TCEEEEC
T ss_pred --------------------------CCeEEeCCHHHHHhcCCEEEEEeCCC--CcccCH--HHcCC---CcEEEeC
Confidence 01445678888899999999999963 333322 35555 6777665
No 123
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=98.24 E-value=8.1e-06 Score=77.74 Aligned_cols=38 Identities=16% Similarity=0.179 Sum_probs=34.1
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCe-eEEEEecCCcchh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVD 86 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~-~V~l~~r~~~~~~ 86 (333)
+|||+|||+|.||+++|..|+.. | + +|.+||+++++++
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~-~-----~~~v~l~Di~~~~~~ 43 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIK-Q-----LGDVVLFDIAQGMPN 43 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECSSSSHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CceEEEEeCChHHHH
Confidence 47999999999999999999998 7 6 8999999997653
No 124
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.24 E-value=1.9e-06 Score=70.98 Aligned_cols=39 Identities=13% Similarity=0.173 Sum_probs=35.0
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (333)
+++|.|+|+|.+|..++..|.+. | ++|++++++++.++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~-g-----~~V~~id~~~~~~~~ 44 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAA-G-----KKVLAVDKSKEKIEL 44 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-C-----CeEEEEECCHHHHHH
Confidence 46899999999999999999999 8 999999999876543
No 125
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.23 E-value=1e-05 Score=67.01 Aligned_cols=39 Identities=23% Similarity=0.236 Sum_probs=35.1
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (333)
..+|.|+|+|.+|..+|..|.+. | ++|++++++++.+++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~-g-----~~v~vid~~~~~~~~ 45 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLAS-D-----IPLVVIETSRTRVDE 45 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESCHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEECCHHHHHH
Confidence 36899999999999999999998 8 999999999987654
No 126
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=98.23 E-value=1.8e-06 Score=83.37 Aligned_cols=97 Identities=26% Similarity=0.316 Sum_probs=69.7
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
-++|+|||.|.||..+|..+... | ++|..|+|++...+.. ..
T Consensus 164 gktvGIIG~G~IG~~vA~~l~~~-G-----~~V~~~dr~~~~~~~~--------------------------~~------ 205 (351)
T 3jtm_A 164 GKTIGTVGAGRIGKLLLQRLKPF-G-----CNLLYHDRLQMAPELE--------------------------KE------ 205 (351)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGG-C-----CEEEEECSSCCCHHHH--------------------------HH------
T ss_pred CCEEeEEEeCHHHHHHHHHHHHC-C-----CEEEEeCCCccCHHHH--------------------------Hh------
Confidence 47999999999999999999877 8 8999999986432210 00
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHhhhhccCCCCEEEEeeecC
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-~~~~vl-~~i~~~l~~~~~~~~Ivs~~kGi 200 (333)
..+...+++++.+..+|+|++++|.. .+..++ ++....+++ ++++|.++.|=
T Consensus 206 -----------------------~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~---gailIN~aRG~ 259 (351)
T 3jtm_A 206 -----------------------TGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKK---GVLIVNNARGA 259 (351)
T ss_dssp -----------------------HCCEECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCT---TEEEEECSCGG
T ss_pred -----------------------CCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCC---CCEEEECcCch
Confidence 02334467889999999999999953 333333 334445666 78899988775
Q ss_pred ccc
Q 019978 201 EAE 203 (333)
Q Consensus 201 ~~~ 203 (333)
...
T Consensus 260 ~vd 262 (351)
T 3jtm_A 260 IME 262 (351)
T ss_dssp GBC
T ss_pred hhC
Confidence 443
No 127
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=98.22 E-value=7.3e-06 Score=77.51 Aligned_cols=103 Identities=18% Similarity=0.216 Sum_probs=69.5
Q ss_pred eEEEECCCHHHHHHHHHHHHhcCCCCCCe-eEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 45 RIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 45 kI~IIGaG~mG~alA~~La~~~G~~~~~~-~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
||+|||+|.||++++..++.. | + +|.|+|+++++++... .+ +... ... . .
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~-~-----l~el~L~Di~~~~~~g~~----~d-l~~~-----------~~~--~----~- 51 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR-G-----YDDLLLIARTPGKPQGEA----LD-LAHA-----------AAE--L----G- 51 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-T-----CSCEEEECSSTTHHHHHH----HH-HHHH-----------HHH--H----T-
T ss_pred CEEEECcCHHHHHHHHHHHhC-C-----CCEEEEEcCChhhHHHHH----HH-HHHh-----------hhh--c----C-
Confidence 799999999999999999988 7 5 7999999987653210 00 1000 000 0 0
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch----------------hHHHHHHHHHhhhhcc
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------------ETKEVFEEISRYWKER 187 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~----------------~~~~vl~~i~~~l~~~ 187 (333)
. ...++.++|. +++++||+||++.+.. .+.++++++.++. +
T Consensus 52 --~------------------~~~i~~t~d~-~a~~~aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~-p- 108 (308)
T 2d4a_B 52 --V------------------DIRISGSNSY-EDMRGSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYA-K- 108 (308)
T ss_dssp --C------------------CCCEEEESCG-GGGTTCSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHC-T-
T ss_pred --C------------------CeEEEECCCH-HHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHC-C-
Confidence 0 0257777787 6799999999996543 2777778887775 4
Q ss_pred CCCCEEEEeeecCc
Q 019978 188 ITVPVIISLAKGVE 201 (333)
Q Consensus 188 ~~~~~Ivs~~kGi~ 201 (333)
+..++..+|-+.
T Consensus 109 --~a~iiv~tNPv~ 120 (308)
T 2d4a_B 109 --DAIVVITTNPVD 120 (308)
T ss_dssp --TCEEEECCSSHH
T ss_pred --CeEEEEeCCchH
Confidence 567777777443
No 128
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.22 E-value=9.5e-07 Score=73.53 Aligned_cols=91 Identities=15% Similarity=0.211 Sum_probs=62.9
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
.+||+|||+|.||.+++..|... | ++|++|+|++++++++.. + +.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~-g-----~~v~v~~r~~~~~~~~a~--------~--------------~~------- 65 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYP-Q-----YKVTVAGRNIDHVRAFAE--------K--------------YE------- 65 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTT-T-----CEEEEEESCHHHHHHHHH--------H--------------HT-------
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CEEEEEcCCHHHHHHHHH--------H--------------hC-------
Confidence 37999999999999999999887 7 779999999876543210 0 00
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeee
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~k 198 (333)
..+...++++++++++|+||.++|+... ++. ...+++ +..++.+..
T Consensus 66 -----------------------~~~~~~~~~~~~~~~~Divi~at~~~~~--~~~--~~~l~~---g~~vid~~~ 111 (144)
T 3oj0_A 66 -----------------------YEYVLINDIDSLIKNNDVIITATSSKTP--IVE--ERSLMP---GKLFIDLGN 111 (144)
T ss_dssp -----------------------CEEEECSCHHHHHHTCSEEEECSCCSSC--SBC--GGGCCT---TCEEEECCS
T ss_pred -----------------------CceEeecCHHHHhcCCCEEEEeCCCCCc--Eee--HHHcCC---CCEEEEccC
Confidence 0133456788888999999999998731 111 133444 567766643
No 129
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=98.20 E-value=1.4e-06 Score=83.26 Aligned_cols=95 Identities=22% Similarity=0.371 Sum_probs=68.6
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
-++|+|||.|.||..+|..+... | ++|..|+|+++..+. +.
T Consensus 137 gktvGIiGlG~IG~~vA~~l~~~-G-----~~V~~~dr~~~~~~~--------------------------~~------- 177 (324)
T 3evt_A 137 GQQLLIYGTGQIGQSLAAKASAL-G-----MHVIGVNTTGHPADH--------------------------FH------- 177 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESSCCCCTT--------------------------CS-------
T ss_pred CCeEEEECcCHHHHHHHHHHHhC-C-----CEEEEECCCcchhHh--------------------------Hh-------
Confidence 37999999999999999999887 8 999999998753221 00
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHhhhhccCCCCEEEEeeecC
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-~~~~vl-~~i~~~l~~~~~~~~Ivs~~kGi 200 (333)
......++++.++.||+|++++|.. .+..++ ++....+++ ++++|.++.|=
T Consensus 178 ------------------------~~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~---gailIN~aRG~ 230 (324)
T 3evt_A 178 ------------------------ETVAFTATADALATANFIVNALPLTPTTHHLFSTELFQQTKQ---QPMLINIGRGP 230 (324)
T ss_dssp ------------------------EEEEGGGCHHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCS---CCEEEECSCGG
T ss_pred ------------------------hccccCCHHHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCC---CCEEEEcCCCh
Confidence 1122356778889999999999953 444443 334445666 78999988775
Q ss_pred ccc
Q 019978 201 EAE 203 (333)
Q Consensus 201 ~~~ 203 (333)
...
T Consensus 231 ~vd 233 (324)
T 3evt_A 231 AVD 233 (324)
T ss_dssp GBC
T ss_pred hhh
Confidence 443
No 130
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.18 E-value=7.3e-06 Score=78.25 Aligned_cols=41 Identities=17% Similarity=0.166 Sum_probs=34.4
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
.+|||+|||+|.||+++|..|+.. |.+ .+|.++|+++++++
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~-~~~---~~l~l~D~~~~k~~ 44 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQ-GIT---DELVVIDVNKEKAM 44 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHH-TCC---SEEEEECSCHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCC---ceEEEEecchHHHH
Confidence 468999999999999999999998 721 28999999876553
No 131
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=98.18 E-value=9.7e-06 Score=77.02 Aligned_cols=40 Identities=23% Similarity=0.232 Sum_probs=33.4
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
.|||+|||+|++|++++..|+.. +.+ .++.++|+++++++
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~-~~~---~el~L~Di~~~~~~ 44 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQ-GIA---EEFVIVDVVKDRTK 44 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHH-TCC---SEEEEECSSHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHcC-CCC---CEEEEEeCCchHHH
Confidence 37999999999999999999988 621 28999999876553
No 132
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=98.17 E-value=1.4e-06 Score=88.34 Aligned_cols=96 Identities=20% Similarity=0.237 Sum_probs=72.0
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
..++|+|||.|.||.++|..|... | ++|+.|+++.+. ++. ...
T Consensus 141 ~g~~vgIIG~G~IG~~vA~~l~~~-G-----~~V~~~d~~~~~-~~a--------------------------~~~---- 183 (529)
T 1ygy_A 141 FGKTVGVVGLGRIGQLVAQRIAAF-G-----AYVVAYDPYVSP-ARA--------------------------AQL---- 183 (529)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEECTTSCH-HHH--------------------------HHH----
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC-C-----CEEEEECCCCCh-hHH--------------------------Hhc----
Confidence 347999999999999999999887 8 899999988632 110 000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHHHH-HHhhhhccCCCCEEEEeeec
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVFEE-ISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-~~~~vl~~-i~~~l~~~~~~~~Ivs~~kG 199 (333)
.+... ++++++..||+|++++|.. .+..++.+ +.+.+++ +++++++++|
T Consensus 184 -------------------------g~~~~-~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~---g~ilin~arg 234 (529)
T 1ygy_A 184 -------------------------GIELL-SLDDLLARADFISVHLPKTPETAGLIDKEALAKTKP---GVIIVNAARG 234 (529)
T ss_dssp -------------------------TCEEC-CHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCT---TEEEEECSCT
T ss_pred -------------------------CcEEc-CHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCC---CCEEEECCCC
Confidence 12222 6788889999999999987 77777755 5566776 7889999887
Q ss_pred Cccc
Q 019978 200 VEAE 203 (333)
Q Consensus 200 i~~~ 203 (333)
-...
T Consensus 235 ~iv~ 238 (529)
T 1ygy_A 235 GLVD 238 (529)
T ss_dssp TSBC
T ss_pred chhh
Confidence 5544
No 133
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=98.17 E-value=3.4e-06 Score=80.00 Aligned_cols=92 Identities=16% Similarity=0.195 Sum_probs=65.8
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
-++|+|||.|.||..+|..+... | ++|+.|+|+++... . ..
T Consensus 142 g~~vgIIG~G~IG~~~A~~l~~~-G-----~~V~~~d~~~~~~~-~--------------------------~~------ 182 (313)
T 2ekl_A 142 GKTIGIVGFGRIGTKVGIIANAM-G-----MKVLAYDILDIREK-A--------------------------EK------ 182 (313)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHT-T-----CEEEEECSSCCHHH-H--------------------------HH------
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC-C-----CEEEEECCCcchhH-H--------------------------Hh------
Confidence 47999999999999999999887 8 89999999875321 0 00
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh-HHHHH-HHHHhhhhccCCCCEEEEeeecC
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-TKEVF-EEISRYWKERITVPVIISLAKGV 200 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~-~~~vl-~~i~~~l~~~~~~~~Ivs~~kGi 200 (333)
. .+.. .++++.+..+|+|++++|... +..++ +.....+++ ++++|+++.|=
T Consensus 183 ---~--------------------g~~~-~~l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~---ga~lIn~arg~ 235 (313)
T 2ekl_A 183 ---I--------------------NAKA-VSLEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKD---NVIIVNTSRAV 235 (313)
T ss_dssp ---T--------------------TCEE-CCHHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCT---TEEEEESSCGG
T ss_pred ---c--------------------Ccee-cCHHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCC---CCEEEECCCCc
Confidence 0 1222 367788889999999999643 43333 333344565 67888887763
No 134
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=98.15 E-value=2.2e-06 Score=81.49 Aligned_cols=92 Identities=16% Similarity=0.167 Sum_probs=67.1
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEec-CCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRR-PGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r-~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
-++|+|||.|.||..+|..+... | ++|+.|++ +++.. .. ...
T Consensus 146 g~~vgIIG~G~IG~~~A~~l~~~-G-----~~V~~~d~~~~~~~-~~--------------------------~~~---- 188 (320)
T 1gdh_A 146 NKTLGIYGFGSIGQALAKRAQGF-D-----MDIDYFDTHRASSS-DE--------------------------ASY---- 188 (320)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEECSSCCCHH-HH--------------------------HHH----
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-C-----CEEEEECCCCcChh-hh--------------------------hhc----
Confidence 47999999999999999999877 7 89999999 77531 00 000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHhhhhccCCCCEEEEeeec
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-~~~~vl-~~i~~~l~~~~~~~~Ivs~~kG 199 (333)
.+...+++++.+..+|+|++++|.. .+..++ +...+.+++ ++++|+++.|
T Consensus 189 -------------------------g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~---gailIn~arg 240 (320)
T 1gdh_A 189 -------------------------QATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQ---GAIVVNTARG 240 (320)
T ss_dssp -------------------------TCEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCT---TEEEEECSCG
T ss_pred -------------------------CcEEcCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCC---CcEEEECCCC
Confidence 1233346888889999999999964 355444 334455666 7888888776
No 135
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=98.15 E-value=2.7e-06 Score=80.40 Aligned_cols=90 Identities=18% Similarity=0.304 Sum_probs=67.0
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
.-++|+|||.|.||..+|..+... | ++|..|+|+++ +. +
T Consensus 123 ~g~~vgIIG~G~IG~~~A~~l~~~-G-----~~V~~~dr~~~--~~----------------------------~----- 161 (303)
T 1qp8_A 123 QGEKVAVLGLGEIGTRVGKILAAL-G-----AQVRGFSRTPK--EG----------------------------P----- 161 (303)
T ss_dssp TTCEEEEESCSTHHHHHHHHHHHT-T-----CEEEEECSSCC--CS----------------------------S-----
T ss_pred CCCEEEEEccCHHHHHHHHHHHHC-C-----CEEEEECCCcc--cc----------------------------C-----
Confidence 347999999999999999999887 8 89999998864 10 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHHH-HHHhhhhccCCCCEEEEeeec
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVFE-EISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-~~~~vl~-~i~~~l~~~~~~~~Ivs~~kG 199 (333)
.....++++.+..+|+|++++|.. .+..++. +....+++ ++++|.++.|
T Consensus 162 --------------------------~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~---gailin~srg 212 (303)
T 1qp8_A 162 --------------------------WRFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLALMAE---DAVFVNVGRA 212 (303)
T ss_dssp --------------------------SCCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCT---TCEEEECSCG
T ss_pred --------------------------cccCCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhhCCC---CCEEEECCCC
Confidence 001135667889999999999976 4555553 45556676 7889888776
Q ss_pred Cc
Q 019978 200 VE 201 (333)
Q Consensus 200 i~ 201 (333)
=.
T Consensus 213 ~~ 214 (303)
T 1qp8_A 213 EV 214 (303)
T ss_dssp GG
T ss_pred cc
Confidence 33
No 136
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=98.14 E-value=3.5e-06 Score=81.13 Aligned_cols=95 Identities=19% Similarity=0.178 Sum_probs=68.5
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
-++|+|||.|.||..+|..+..- | .+|..|+|++...+. ..
T Consensus 173 gktvGIIGlG~IG~~vA~~l~~~-G-----~~V~~~dr~~~~~~~--------------------------~~------- 213 (345)
T 4g2n_A 173 GRRLGIFGMGRIGRAIATRARGF-G-----LAIHYHNRTRLSHAL--------------------------EE------- 213 (345)
T ss_dssp TCEEEEESCSHHHHHHHHHHHTT-T-----CEEEEECSSCCCHHH--------------------------HT-------
T ss_pred CCEEEEEEeChhHHHHHHHHHHC-C-----CEEEEECCCCcchhh--------------------------hc-------
Confidence 37999999999999999999877 7 899999998643210 00
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHhhhhccCCCCEEEEeeecC
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-~~~~vl-~~i~~~l~~~~~~~~Ivs~~kGi 200 (333)
.....+++++.++.+|+|++++|.. .+..++ ++....+++ ++++|.++.|=
T Consensus 214 ------------------------g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~---gailIN~aRG~ 266 (345)
T 4g2n_A 214 ------------------------GAIYHDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPE---GAVVINISRGD 266 (345)
T ss_dssp ------------------------TCEECSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCT---TEEEEECSCGG
T ss_pred ------------------------CCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCC---CcEEEECCCCc
Confidence 1223357888999999999999953 344333 334445566 78899988775
Q ss_pred ccc
Q 019978 201 EAE 203 (333)
Q Consensus 201 ~~~ 203 (333)
...
T Consensus 267 ~vd 269 (345)
T 4g2n_A 267 LIN 269 (345)
T ss_dssp GBC
T ss_pred hhC
Confidence 443
No 137
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=98.14 E-value=3.2e-06 Score=81.39 Aligned_cols=98 Identities=12% Similarity=0.101 Sum_probs=69.7
Q ss_pred CCCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhh
Q 019978 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (333)
Q Consensus 40 ~~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (333)
+-.-++|+|||.|.||..+|..+... | .+|..|+++.+.... . ..
T Consensus 165 ~l~g~tvGIIG~G~IG~~vA~~l~~~-G-----~~V~~~d~~~~~~~~-----------~----------------~~-- 209 (347)
T 1mx3_A 165 RIRGETLGIIGLGRVGQAVALRAKAF-G-----FNVLFYDPYLSDGVE-----------R----------------AL-- 209 (347)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEECTTSCTTHH-----------H----------------HH--
T ss_pred CCCCCEEEEEeECHHHHHHHHHHHHC-C-----CEEEEECCCcchhhH-----------h----------------hc--
Confidence 34458999999999999999999887 8 899999987642100 0 00
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHhhhhccCCCCEEEEee
Q 019978 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLA 197 (333)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-~~~~vl-~~i~~~l~~~~~~~~Ivs~~ 197 (333)
.+....++++.+..+|+|++++|.. .++.++ ++....+++ ++++|+++
T Consensus 210 ---------------------------g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~---gailIN~a 259 (347)
T 1mx3_A 210 ---------------------------GLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQ---GAFLVNTA 259 (347)
T ss_dssp ---------------------------TCEECSSHHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCT---TEEEEECS
T ss_pred ---------------------------CCeecCCHHHHHhcCCEEEEcCCCCHHHHHHhHHHHHhcCCC---CCEEEECC
Confidence 1223346788889999999999974 444444 344455666 78889888
Q ss_pred ecCcc
Q 019978 198 KGVEA 202 (333)
Q Consensus 198 kGi~~ 202 (333)
.|=..
T Consensus 260 rg~~v 264 (347)
T 1mx3_A 260 RGGLV 264 (347)
T ss_dssp CTTSB
T ss_pred CChHH
Confidence 77443
No 138
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=98.13 E-value=3.3e-06 Score=82.67 Aligned_cols=97 Identities=21% Similarity=0.201 Sum_probs=69.3
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
.-++|+|||.|.||..+|..+... | ++|..|+|+++..+.. ..
T Consensus 190 ~gktvGIIGlG~IG~~vA~~l~a~-G-----~~V~~~d~~~~~~~~~--------------------------~~----- 232 (393)
T 2nac_A 190 EAMHVGTVAAGRIGLAVLRRLAPF-D-----VHLHYTDRHRLPESVE--------------------------KE----- 232 (393)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGG-T-----CEEEEECSSCCCHHHH--------------------------HH-----
T ss_pred CCCEEEEEeECHHHHHHHHHHHhC-C-----CEEEEEcCCccchhhH--------------------------hh-----
Confidence 347999999999999999999877 8 8999999986432210 00
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHhhhhccCCCCEEEEeeec
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-~~~~vl-~~i~~~l~~~~~~~~Ivs~~kG 199 (333)
+ .+....++++.+..+|+|++++|.. .++.++ ++....+++ ++++|+++.|
T Consensus 233 ----~--------------------G~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~---gailIN~aRG 285 (393)
T 2nac_A 233 ----L--------------------NLTWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKR---GAYIVNTARG 285 (393)
T ss_dssp ----H--------------------TCEECSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCT---TEEEEECSCG
T ss_pred ----c--------------------CceecCCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCC---CCEEEECCCc
Confidence 0 1233356788899999999999954 444454 344455666 7889988877
Q ss_pred Ccc
Q 019978 200 VEA 202 (333)
Q Consensus 200 i~~ 202 (333)
=..
T Consensus 286 ~~v 288 (393)
T 2nac_A 286 KLC 288 (393)
T ss_dssp GGB
T ss_pred hHh
Confidence 433
No 139
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=98.12 E-value=9.5e-06 Score=77.62 Aligned_cols=107 Identities=8% Similarity=-0.041 Sum_probs=71.1
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
..+||+|||+|.||+++|..++.. |.+ .+|.++|+++++++... .. |+. ...+ .
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~-g~~---~ev~L~Di~~~~~~g~a-------~D-----L~~---~~~~-~------ 73 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMK-DLA---DEVALVDVMEDKLKGEM-------MD-----LEH---GSLF-L------ 73 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHH-CCC---SEEEEECSCHHHHHHHH-------HH-----HHH---HGGG-S------
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCC---CeEEEEECCHHHHHHHH-------HH-----hhh---hhhc-c------
Confidence 458999999999999999999998 722 38999999886543210 00 010 0000 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc----------------hhHHHHHHHHHhhhh
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS----------------TETKEVFEEISRYWK 185 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps----------------~~~~~vl~~i~~~l~ 185 (333)
. ...+..++|.++ +++||+||++... ..++++.+++.++ .
T Consensus 74 ---~-------------------~~~i~~t~d~~~-~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~-~ 129 (330)
T 3ldh_A 74 ---H-------------------TAKIVSGKDYSV-SAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKH-S 129 (330)
T ss_dssp ---C-------------------CSEEEEESSSCS-CSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHH-C
T ss_pred ---c-------------------CCeEEEcCCHHH-hCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-C
Confidence 0 024667788865 8999999997532 2366777777777 3
Q ss_pred ccCCCCEEEEeeecCc
Q 019978 186 ERITVPVIISLAKGVE 201 (333)
Q Consensus 186 ~~~~~~~Ivs~~kGi~ 201 (333)
+ +..++.++|-..
T Consensus 130 P---~a~ilvvtNPvd 142 (330)
T 3ldh_A 130 P---DCLKELHPELGT 142 (330)
T ss_dssp T---TCEEEECSSSHH
T ss_pred C---CceEEeCCCccH
Confidence 4 677777776543
No 140
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.12 E-value=1e-05 Score=67.69 Aligned_cols=75 Identities=21% Similarity=0.282 Sum_probs=55.3
Q ss_pred CCceEEEECC----CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchh
Q 019978 42 DPLRIVGVGA----GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYV 117 (333)
Q Consensus 42 ~~~kI~IIGa----G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~ 117 (333)
.+.+|+|||+ |.||..++..|.+. | ++ +|..++.. ++ ..
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~-G-----~~--V~~vnp~~-~~--------------------------i~-- 55 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSK-G-----FE--VLPVNPNY-DE--------------------------IE-- 55 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHT-T-----CE--EEEECTTC-SE--------------------------ET--
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHC-C-----CE--EEEeCCCC-Ce--------------------------EC--
Confidence 3579999999 99999999999988 8 76 45454431 11 00
Q ss_pred hhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHh
Q 019978 118 EARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISR 182 (333)
Q Consensus 118 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~ 182 (333)
.+.+..++++..+.+|++++++|+....++++++..
T Consensus 56 -----------------------------G~~~~~s~~el~~~vDlvii~vp~~~v~~v~~~~~~ 91 (138)
T 1y81_A 56 -----------------------------GLKCYRSVRELPKDVDVIVFVVPPKVGLQVAKEAVE 91 (138)
T ss_dssp -----------------------------TEECBSSGGGSCTTCCEEEECSCHHHHHHHHHHHHH
T ss_pred -----------------------------CeeecCCHHHhCCCCCEEEEEeCHHHHHHHHHHHHH
Confidence 233445566656679999999999999999988765
No 141
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=98.12 E-value=1.3e-05 Score=76.19 Aligned_cols=34 Identities=18% Similarity=0.247 Sum_probs=31.5
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCe-eEEEEecCC
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPG 82 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~-~V~l~~r~~ 82 (333)
.+||+|||+|.||+++|..++.. | + +|++||+++
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~-g-----~~~v~l~D~~~ 42 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQK-E-----LADVVLVDIPQ 42 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CCeEEEEeccc
Confidence 47999999999999999999998 7 7 999999984
No 142
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=98.12 E-value=8.8e-06 Score=77.17 Aligned_cols=40 Identities=23% Similarity=0.248 Sum_probs=33.5
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcch
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (333)
.+|||+|||+|++|++++..|+.. |.+ .+|.++|++++++
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~-~~~---~ei~L~Di~~~~~ 44 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQ-SIV---DELVIIDLDTEKV 44 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-CSC---SEEEEECSCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCC---CEEEEEeCChhHh
Confidence 347999999999999999999988 621 3899999987654
No 143
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=98.11 E-value=9.4e-06 Score=77.12 Aligned_cols=39 Identities=10% Similarity=0.155 Sum_probs=33.6
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
|||+|||+|.||+++|..|+.. |.. .+|.++|+++++++
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~-~~~---~el~l~D~~~~k~~ 39 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQ-DVA---KEVVMVDIKDGMPQ 39 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCS---SEEEEECSSTTHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCC---CEEEEEeCchHHHH
Confidence 7999999999999999999998 721 28999999987653
No 144
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=98.11 E-value=1.2e-05 Score=76.54 Aligned_cols=41 Identities=24% Similarity=0.231 Sum_probs=33.7
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
..|||+|||+|++|++++..|+.. +.+ .++.|+|+++++++
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~-~~~---~el~L~Di~~~~~~ 48 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQ-GIA---QEIGIVDIFKDKTK 48 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-TCC---SEEEEECSCHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHcC-CCC---CEEEEEeCCchHhH
Confidence 348999999999999999999888 621 28999999876543
No 145
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.10 E-value=5.4e-06 Score=65.28 Aligned_cols=39 Identities=23% Similarity=0.296 Sum_probs=33.7
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
+|+|+|+|+|.||..++..|.+. |. ++|++++|++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~-g~----~~v~~~~r~~~~~~ 43 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTS-SN----YSVTVADHDLAALA 43 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC-SS----EEEEEEESCHHHHH
T ss_pred cCeEEEECCCHHHHHHHHHHHhC-CC----ceEEEEeCCHHHHH
Confidence 47999999999999999999988 62 78999999886543
No 146
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=98.10 E-value=3.4e-06 Score=81.69 Aligned_cols=96 Identities=23% Similarity=0.249 Sum_probs=68.8
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCee-EEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~-V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
.-++|+|||.|.||..+|..+... | .+ |..|+|+++..+.. ..
T Consensus 163 ~g~tvgIIG~G~IG~~vA~~l~~~-G-----~~~V~~~d~~~~~~~~~--------------------------~~---- 206 (364)
T 2j6i_A 163 EGKTIATIGAGRIGYRVLERLVPF-N-----PKELLYYDYQALPKDAE--------------------------EK---- 206 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGG-C-----CSEEEEECSSCCCHHHH--------------------------HH----
T ss_pred CCCEEEEECcCHHHHHHHHHHHhC-C-----CcEEEEECCCccchhHH--------------------------Hh----
Confidence 347999999999999999999877 8 87 99999987543210 00
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHhhhhccCCCCEEEEeee
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAK 198 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-~~~~vl-~~i~~~l~~~~~~~~Ivs~~k 198 (333)
..+....++++.+..+|+|++++|.. .++.++ +.....+++ ++++|+++.
T Consensus 207 -------------------------~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~---ga~lIn~ar 258 (364)
T 2j6i_A 207 -------------------------VGARRVENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKK---GAWLVNTAR 258 (364)
T ss_dssp -------------------------TTEEECSSHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCT---TEEEEECSC
T ss_pred -------------------------cCcEecCCHHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCC---CCEEEECCC
Confidence 02333457888889999999999975 444444 334455666 788888887
Q ss_pred cCc
Q 019978 199 GVE 201 (333)
Q Consensus 199 Gi~ 201 (333)
|=.
T Consensus 259 G~~ 261 (364)
T 2j6i_A 259 GAI 261 (364)
T ss_dssp GGG
T ss_pred Cch
Confidence 733
No 147
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.09 E-value=4.1e-06 Score=68.21 Aligned_cols=38 Identities=16% Similarity=0.208 Sum_probs=33.4
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
+++|.|+|+|.+|..++..|.+. | ++|++++++++.++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~-g-----~~v~~~d~~~~~~~ 43 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRM-G-----HEVLAVDINEEKVN 43 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-T-----CCCEEEESCHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHH
Confidence 35899999999999999999998 8 89999999876543
No 148
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.08 E-value=1.8e-05 Score=75.34 Aligned_cols=81 Identities=21% Similarity=0.148 Sum_probs=59.6
Q ss_pred CCceEEEECCCHHHHHHHHHHHHh-cCCCCCCeeEE-EEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDS-YGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~-~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (333)
.++||+|||+|.||..++..+.+. .+ .++. ++++++++++++.. .
T Consensus 12 ~~~rvgiiG~G~~g~~~~~~l~~~~~~-----~~lvav~d~~~~~~~~~~~--------~-------------------- 58 (354)
T 3q2i_A 12 RKIRFALVGCGRIANNHFGALEKHADR-----AELIDVCDIDPAALKAAVE--------R-------------------- 58 (354)
T ss_dssp SCEEEEEECCSTTHHHHHHHHHHTTTT-----EEEEEEECSSHHHHHHHHH--------H--------------------
T ss_pred CcceEEEEcCcHHHHHHHHHHHhCCCC-----eEEEEEEcCCHHHHHHHHH--------H--------------------
Confidence 568999999999999999988765 13 6754 88998865432110 0
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHH
Q 019978 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEIS 181 (333)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~--~aDlIIlaVps~~~~~vl~~i~ 181 (333)
+ .+.+.+|+++.+. +.|+|++|+|+....+++....
T Consensus 59 ------~--------------------~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al 96 (354)
T 3q2i_A 59 ------T--------------------GARGHASLTDMLAQTDADIVILTTPSGLHPTQSIECS 96 (354)
T ss_dssp ------H--------------------CCEEESCHHHHHHHCCCSEEEECSCGGGHHHHHHHHH
T ss_pred ------c--------------------CCceeCCHHHHhcCCCCCEEEECCCcHHHHHHHHHHH
Confidence 0 2456688888876 7999999999987777766554
No 149
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=98.07 E-value=5e-06 Score=78.58 Aligned_cols=91 Identities=23% Similarity=0.310 Sum_probs=65.7
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
-++|+|||.|.||..+|..+... | ++|..|+|+++. +.. ..
T Consensus 142 g~~vgIiG~G~IG~~~A~~l~~~-G-----~~V~~~d~~~~~-~~~--------------------------~~------ 182 (307)
T 1wwk_A 142 GKTIGIIGFGRIGYQVAKIANAL-G-----MNILLYDPYPNE-ERA--------------------------KE------ 182 (307)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCH-HHH--------------------------HH------
T ss_pred CceEEEEccCHHHHHHHHHHHHC-C-----CEEEEECCCCCh-hhH--------------------------hh------
Confidence 47999999999999999999887 8 899999998753 110 00
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh-HHHHH-HHHHhhhhccCCCCEEEEeeec
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-TKEVF-EEISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~-~~~vl-~~i~~~l~~~~~~~~Ivs~~kG 199 (333)
+ .+.. .++++.+..+|+|++++|... +..++ ++....+++ ++++|.++.|
T Consensus 183 ---~--------------------g~~~-~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~---ga~lin~arg 234 (307)
T 1wwk_A 183 ---V--------------------NGKF-VDLETLLKESDVVTIHVPLVESTYHLINEERLKLMKK---TAILINTSRG 234 (307)
T ss_dssp ---T--------------------TCEE-CCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCT---TCEEEECSCG
T ss_pred ---c--------------------Cccc-cCHHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCC---CeEEEECCCC
Confidence 0 1222 367788889999999999643 44444 334445666 7888888776
No 150
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=98.07 E-value=1.7e-06 Score=82.54 Aligned_cols=95 Identities=19% Similarity=0.298 Sum_probs=68.1
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
-++|+|||.|.||..+|..+... | ++|+.|+|+++..+. ..
T Consensus 140 g~tvGIIGlG~IG~~vA~~l~~~-G-----~~V~~~dr~~~~~~~--------------------------~~------- 180 (324)
T 3hg7_A 140 GRTLLILGTGSIGQHIAHTGKHF-G-----MKVLGVSRSGRERAG--------------------------FD------- 180 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCCCTT--------------------------CS-------
T ss_pred cceEEEEEECHHHHHHHHHHHhC-C-----CEEEEEcCChHHhhh--------------------------hh-------
Confidence 37999999999999999999887 8 899999998743210 00
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHhhhhccCCCCEEEEeeecC
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-~~~~vl-~~i~~~l~~~~~~~~Ivs~~kGi 200 (333)
......++++++..+|+|++++|.. .++.++ ++....+++ ++++|.++.|=
T Consensus 181 ------------------------~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~---gailIN~aRG~ 233 (324)
T 3hg7_A 181 ------------------------QVYQLPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCKP---GAILFNVGRGN 233 (324)
T ss_dssp ------------------------EEECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCT---TCEEEECSCGG
T ss_pred ------------------------cccccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCC---CcEEEECCCch
Confidence 1112357888899999999999954 344433 223344566 78999998775
Q ss_pred ccc
Q 019978 201 EAE 203 (333)
Q Consensus 201 ~~~ 203 (333)
...
T Consensus 234 ~vd 236 (324)
T 3hg7_A 234 AIN 236 (324)
T ss_dssp GBC
T ss_pred hhC
Confidence 543
No 151
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.06 E-value=1.7e-05 Score=75.14 Aligned_cols=82 Identities=21% Similarity=0.213 Sum_probs=60.3
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEE-EEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
.++||+|||+|.||..++..|.+. . +.+|+ +++++++.++++. +
T Consensus 3 ~~~rvgiiG~G~~g~~~~~~l~~~-~----~~~l~av~d~~~~~~~~~a---------~--------------------- 47 (344)
T 3euw_A 3 LTLRIALFGAGRIGHVHAANIAAN-P----DLELVVIADPFIEGAQRLA---------E--------------------- 47 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHC-T----TEEEEEEECSSHHHHHHHH---------H---------------------
T ss_pred CceEEEEECCcHHHHHHHHHHHhC-C----CcEEEEEECCCHHHHHHHH---------H---------------------
Confidence 358999999999999999998875 3 26765 7888876543210 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHh
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISR 182 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~--~aDlIIlaVps~~~~~vl~~i~~ 182 (333)
.+ .+.+.+|+++.+. ++|+|++|+|+....+++.....
T Consensus 48 ----~~--------------------g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~ 87 (344)
T 3euw_A 48 ----AN--------------------GAEAVASPDEVFARDDIDGIVIGSPTSTHVDLITRAVE 87 (344)
T ss_dssp ----TT--------------------TCEEESSHHHHTTCSCCCEEEECSCGGGHHHHHHHHHH
T ss_pred ----Hc--------------------CCceeCCHHHHhcCCCCCEEEEeCCchhhHHHHHHHHH
Confidence 00 2445688888887 79999999999987777766543
No 152
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.06 E-value=9.6e-06 Score=69.79 Aligned_cols=39 Identities=15% Similarity=0.163 Sum_probs=33.1
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
.++|.|+|+|.+|..++..|.+..| ++|+++++++++++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g-----~~V~vid~~~~~~~ 77 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYG-----KISLGIEIREEAAQ 77 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHC-----SCEEEEESCHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccC-----CeEEEEECCHHHHH
Confidence 3689999999999999999976414 89999999987654
No 153
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=98.05 E-value=1.1e-05 Score=73.93 Aligned_cols=109 Identities=13% Similarity=0.192 Sum_probs=70.4
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEE-EEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
||||+|+|+|.||..++..+.+. + +++. +++++++. .
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~-~-----~eLva~~d~~~~~----------------------------~-------- 40 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEK-G-----HEIVGVIENTPKA----------------------------T-------- 40 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEECSSCC--------------------------------------
T ss_pred ceEEEEECcCHHHHHHHHHHHhC-C-----CEEEEEEecCccc----------------------------c--------
Confidence 58999999999999999999988 6 5443 35555421 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCc
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~ 201 (333)
..+.+++|+++.+ ++|++|-++.+....+.++ +.. +..+|+.+.|+.
T Consensus 41 ------------------------~gv~v~~dl~~l~-~~DVvIDft~p~a~~~~~~-----l~~---g~~vVigTTG~s 87 (243)
T 3qy9_A 41 ------------------------TPYQQYQHIADVK-GADVAIDFSNPNLLFPLLD-----EDF---HLPLVVATTGEK 87 (243)
T ss_dssp ------------------------CCSCBCSCTTTCT-TCSEEEECSCHHHHHHHHT-----SCC---CCCEEECCCSSH
T ss_pred ------------------------CCCceeCCHHHHh-CCCEEEEeCChHHHHHHHH-----Hhc---CCceEeCCCCCC
Confidence 0233456776666 8999996666655555554 333 556777777886
Q ss_pred ccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHH
Q 019978 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASE 239 (333)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~e 239 (333)
.+. .+.+.+... ...++..||+..-
T Consensus 88 ~e~---------~~~l~~aa~----~~~v~~a~N~S~G 112 (243)
T 3qy9_A 88 EKL---------LNKLDELSQ----NMPVFFSANMSYG 112 (243)
T ss_dssp HHH---------HHHHHHHTT----TSEEEECSSCCHH
T ss_pred HHH---------HHHHHHHHh----cCCEEEECCccHH
Confidence 541 123444332 2457889999754
No 154
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.05 E-value=2.5e-05 Score=70.40 Aligned_cols=81 Identities=23% Similarity=0.357 Sum_probs=60.0
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeE-EEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
|||+|||+|.||..++..|.+. | ++| .+|++++ ..+
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~-g-----~~lv~v~d~~~-~~~------------------------------------ 37 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERN-G-----FEIAAILDVRG-EHE------------------------------------ 37 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEECSSC-CCT------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHhcC-C-----CEEEEEEecCc-chh------------------------------------
Confidence 6999999999999999999876 6 886 6888874 211
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHh-cCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeec
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAV-WDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~-~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kG 199 (333)
. ..+|+++.+ .++|+|++++|+....+++... +.. ++.+++...+
T Consensus 38 ------------------------~--~~~~~~~l~~~~~DvVv~~~~~~~~~~~~~~~---l~~---G~~vv~~~~~ 83 (236)
T 2dc1_A 38 ------------------------K--MVRGIDEFLQREMDVAVEAASQQAVKDYAEKI---LKA---GIDLIVLSTG 83 (236)
T ss_dssp ------------------------T--EESSHHHHTTSCCSEEEECSCHHHHHHHHHHH---HHT---TCEEEESCGG
T ss_pred ------------------------h--hcCCHHHHhcCCCCEEEECCCHHHHHHHHHHH---HHC---CCcEEEECcc
Confidence 1 235666767 6899999999998777776543 344 5667765544
No 155
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=98.04 E-value=6.6e-06 Score=79.06 Aligned_cols=39 Identities=21% Similarity=0.332 Sum_probs=32.9
Q ss_pred CCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 41 ~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
.+.|||.|+|||.+|..++..|++. ++|++++++.+.++
T Consensus 14 g~~mkilvlGaG~vG~~~~~~L~~~-------~~v~~~~~~~~~~~ 52 (365)
T 3abi_A 14 GRHMKVLILGAGNIGRAIAWDLKDE-------FDVYIGDVNNENLE 52 (365)
T ss_dssp --CCEEEEECCSHHHHHHHHHHTTT-------SEEEEEESCHHHHH
T ss_pred CCccEEEEECCCHHHHHHHHHHhcC-------CCeEEEEcCHHHHH
Confidence 4568999999999999999999876 79999999886554
No 156
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=98.02 E-value=3.7e-06 Score=79.69 Aligned_cols=88 Identities=23% Similarity=0.253 Sum_probs=66.1
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
-++|+|||+|.||..+|..+... | ++|..|+|+++..+
T Consensus 144 g~~vgIIG~G~IG~~~A~~l~~~-G-----~~V~~~d~~~~~~~------------------------------------ 181 (311)
T 2cuk_A 144 GLTLGLVGMGRIGQAVAKRALAF-G-----MRVVYHARTPKPLP------------------------------------ 181 (311)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCSSS------------------------------------
T ss_pred CCEEEEEEECHHHHHHHHHHHHC-C-----CEEEEECCCCcccc------------------------------------
Confidence 47999999999999999999887 8 89999999874210
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHHH-HHHhhhhccCCCCEEEEeeecC
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVFE-EISRYWKERITVPVIISLAKGV 200 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-~~~~vl~-~i~~~l~~~~~~~~Ivs~~kGi 200 (333)
+ ...++++.+..+|+|++++|.. .+..++. +....+++ ++++|.++.|-
T Consensus 182 -------------------------~-~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~---ga~lin~srg~ 232 (311)
T 2cuk_A 182 -------------------------Y-PFLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKR---GAILLNTARGA 232 (311)
T ss_dssp -------------------------S-CBCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCT---TCEEEECSCGG
T ss_pred -------------------------c-ccCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCC---CcEEEECCCCC
Confidence 0 0135677888999999999986 4555553 34445666 78888887763
Q ss_pred c
Q 019978 201 E 201 (333)
Q Consensus 201 ~ 201 (333)
.
T Consensus 233 ~ 233 (311)
T 2cuk_A 233 L 233 (311)
T ss_dssp G
T ss_pred c
Confidence 3
No 157
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=98.02 E-value=3.3e-06 Score=81.51 Aligned_cols=96 Identities=15% Similarity=0.189 Sum_probs=68.5
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
-++|+|||.|.||..+|..+... | ++|..|+|+... +. ...
T Consensus 160 g~tvGIIGlG~IG~~vA~~l~~~-G-----~~V~~~d~~~~~-~~--------------------------~~~------ 200 (352)
T 3gg9_A 160 GQTLGIFGYGKIGQLVAGYGRAF-G-----MNVLVWGRENSK-ER--------------------------ARA------ 200 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSHHHH-HH--------------------------HHH------
T ss_pred CCEEEEEeECHHHHHHHHHHHhC-C-----CEEEEECCCCCH-HH--------------------------HHh------
Confidence 37999999999999999999887 8 899999987521 10 000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHhhhhccCCCCEEEEeeecC
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-~~~~vl-~~i~~~l~~~~~~~~Ivs~~kGi 200 (333)
..+...++++++++.+|+|++++|.. .++.++ ++....+++ ++++|.++.|=
T Consensus 201 -----------------------~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~---gailIN~aRg~ 254 (352)
T 3gg9_A 201 -----------------------DGFAVAESKDALFEQSDVLSVHLRLNDETRSIITVADLTRMKP---TALFVNTSRAE 254 (352)
T ss_dssp -----------------------TTCEECSSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCT---TCEEEECSCGG
T ss_pred -----------------------cCceEeCCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHhhCCC---CcEEEECCCch
Confidence 02344467889999999999999954 344333 234455666 78999988774
Q ss_pred ccc
Q 019978 201 EAE 203 (333)
Q Consensus 201 ~~~ 203 (333)
...
T Consensus 255 ~vd 257 (352)
T 3gg9_A 255 LVE 257 (352)
T ss_dssp GBC
T ss_pred hhc
Confidence 443
No 158
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=98.01 E-value=7e-06 Score=80.60 Aligned_cols=93 Identities=16% Similarity=0.244 Sum_probs=68.2
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
.-++|+|||.|.||..+|..+... | ++|..|+++++.. ..
T Consensus 144 ~gktlGiIGlG~IG~~vA~~l~~~-G-----~~V~~~d~~~~~~----------------------------~~------ 183 (404)
T 1sc6_A 144 RGKKLGIIGYGHIGTQLGILAESL-G-----MYVYFYDIENKLP----------------------------LG------ 183 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCCC----------------------------CT------
T ss_pred CCCEEEEEeECHHHHHHHHHHHHC-C-----CEEEEEcCCchhc----------------------------cC------
Confidence 347999999999999999999877 8 9999999876310 00
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHhhhhccCCCCEEEEeeec
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-~~~~vl-~~i~~~l~~~~~~~~Ivs~~kG 199 (333)
.+....++++.+..||+|++++|.. .++.++ ++....+++ ++++|.++.|
T Consensus 184 -------------------------~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~---ga~lIN~aRg 235 (404)
T 1sc6_A 184 -------------------------NATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKP---GSLLINASRG 235 (404)
T ss_dssp -------------------------TCEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCT---TEEEEECSCS
T ss_pred -------------------------CceecCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCC---CeEEEECCCC
Confidence 1233457888899999999999975 444444 333445666 7889988877
Q ss_pred Ccc
Q 019978 200 VEA 202 (333)
Q Consensus 200 i~~ 202 (333)
-..
T Consensus 236 ~~v 238 (404)
T 1sc6_A 236 TVV 238 (404)
T ss_dssp SSB
T ss_pred hHH
Confidence 443
No 159
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=98.00 E-value=2.8e-05 Score=74.24 Aligned_cols=42 Identities=24% Similarity=0.217 Sum_probs=34.7
Q ss_pred CCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 41 ~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
...+||+|||+|.+|+++|..|+.. |.+ .++.++|+++++++
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~-~~~---~el~l~D~~~~k~~ 48 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQ-GIA---QEIGIVDIFKDKTK 48 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHH-TCC---SEEEEECSCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-CCC---CeEEEEeCChHHHH
Confidence 3458999999999999999999998 721 28999999876553
No 160
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.99 E-value=3.6e-05 Score=72.33 Aligned_cols=81 Identities=17% Similarity=0.186 Sum_probs=58.3
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeE-EEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
|+||+|||+|.||..++..|.+. + +.++ .++++++++++++. +
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~-~----~~~~~~v~d~~~~~~~~~~---------~---------------------- 44 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTS-G----EYQLVAIYSRKLETAATFA---------S---------------------- 44 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-T----SEEEEEEECSSHHHHHHHG---------G----------------------
T ss_pred CeEEEEEeCCHHHHHHHHHHHhC-C----CeEEEEEEeCCHHHHHHHH---------H----------------------
Confidence 47999999999999999999875 3 2565 47888876443210 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHh-cCCCEEEEecCchhHHHHHHHHH
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAV-WDADIVINGLPSTETKEVFEEIS 181 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~-~~aDlIIlaVps~~~~~vl~~i~ 181 (333)
.+ ....+.+|.++.+ .++|+|++|+|+....+++....
T Consensus 45 ---~~-------------------~~~~~~~~~~~~l~~~~D~V~i~tp~~~h~~~~~~al 83 (325)
T 2ho3_A 45 ---RY-------------------QNIQLFDQLEVFFKSSFDLVYIASPNSLHFAQAKAAL 83 (325)
T ss_dssp ---GS-------------------SSCEEESCHHHHHTSSCSEEEECSCGGGHHHHHHHHH
T ss_pred ---Hc-------------------CCCeEeCCHHHHhCCCCCEEEEeCChHHHHHHHHHHH
Confidence 00 0124567888888 68999999999998877777654
No 161
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=97.99 E-value=6.1e-06 Score=75.66 Aligned_cols=59 Identities=20% Similarity=0.292 Sum_probs=41.8
Q ss_pred cccccchHHhhhHHHHhhccCCCCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 19 HHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
..+|-...-=+..+++. +.. -.- +|+|||+|.||.+++..|.+. | ++|++|+|++++++
T Consensus 95 ~g~ntd~~g~~~~l~~~-~~~-l~~-~v~iiG~G~~g~~~a~~l~~~-g-----~~v~v~~r~~~~~~ 153 (263)
T 2d5c_A 95 FGFNTDAPGFLEALKAG-GIP-LKG-PALVLGAGGAGRAVAFALREA-G-----LEVWVWNRTPQRAL 153 (263)
T ss_dssp EEECCHHHHHHHHHHHT-TCC-CCS-CEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSHHHHH
T ss_pred EEeCCCHHHHHHHHHHh-CCC-CCC-eEEEECCcHHHHHHHHHHHHC-C-----CEEEEEECCHHHHH
Confidence 34454444444455442 222 223 899999999999999999998 8 78999999976543
No 162
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=97.97 E-value=1.1e-05 Score=79.51 Aligned_cols=93 Identities=23% Similarity=0.300 Sum_probs=66.5
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
-++|+|||.|.||..+|..+..- | ++|..|+++++... .
T Consensus 156 gktvGIIGlG~IG~~vA~~l~~~-G-----~~V~~yd~~~~~~~----------------------------~------- 194 (416)
T 3k5p_A 156 GKTLGIVGYGNIGSQVGNLAESL-G-----MTVRYYDTSDKLQY----------------------------G------- 194 (416)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECTTCCCCB----------------------------T-------
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC-C-----CEEEEECCcchhcc----------------------------c-------
Confidence 37999999999999999999877 8 99999998753110 0
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHhhhhccCCCCEEEEeeecC
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-~~~~vl-~~i~~~l~~~~~~~~Ivs~~kGi 200 (333)
......++++.++.||+|++++|.. .++.++ ++....+++ ++++|.++.|-
T Consensus 195 ------------------------~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~---gailIN~aRG~ 247 (416)
T 3k5p_A 195 ------------------------NVKPAASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKK---GAFLINNARGS 247 (416)
T ss_dssp ------------------------TBEECSSHHHHHHHCSEEEECCCC-----CCBCHHHHHHSCT---TEEEEECSCTT
T ss_pred ------------------------CcEecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCC---CcEEEECCCCh
Confidence 1223467888999999999999974 344443 233344566 78999988775
Q ss_pred ccc
Q 019978 201 EAE 203 (333)
Q Consensus 201 ~~~ 203 (333)
...
T Consensus 248 vvd 250 (416)
T 3k5p_A 248 DVD 250 (416)
T ss_dssp SBC
T ss_pred hhh
Confidence 543
No 163
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.97 E-value=1.9e-05 Score=73.66 Aligned_cols=94 Identities=7% Similarity=0.102 Sum_probs=63.9
Q ss_pred CceEEEECCCHHHHH-HHHHHHHhcCCCCCCeeEE-EEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 43 PLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 43 ~~kI~IIGaG~mG~a-lA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
++||+|||+|.||.. ++..|.+..+ .++. ++++++++++++.. . +
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~-----~~l~av~d~~~~~~~~~a~--------~--------------~------ 52 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSER-----FEFVGAFTPNKVKREKICS--------D--------------Y------ 52 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSS-----SEEEEEECSCHHHHHHHHH--------H--------------H------
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCC-----eEEEEEECCCHHHHHHHHH--------H--------------c------
Confidence 479999999999996 8888876413 5665 88998876543210 0 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecC
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi 200 (333)
++...+|+++.+.+.|+|++|+|+....+++..... . ++.|+ +-|-+
T Consensus 53 --------------------------~~~~~~~~~~ll~~~D~V~i~tp~~~h~~~~~~al~---~---gk~vl-~EKP~ 99 (308)
T 3uuw_A 53 --------------------------RIMPFDSIESLAKKCDCIFLHSSTETHYEIIKILLN---L---GVHVY-VDKPL 99 (308)
T ss_dssp --------------------------TCCBCSCHHHHHTTCSEEEECCCGGGHHHHHHHHHH---T---TCEEE-ECSSS
T ss_pred --------------------------CCCCcCCHHHHHhcCCEEEEeCCcHhHHHHHHHHHH---C---CCcEE-EcCCC
Confidence 111257888888899999999999988777766543 2 44443 55544
Q ss_pred cc
Q 019978 201 EA 202 (333)
Q Consensus 201 ~~ 202 (333)
..
T Consensus 100 ~~ 101 (308)
T 3uuw_A 100 AS 101 (308)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 164
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.96 E-value=3.5e-05 Score=72.60 Aligned_cols=80 Identities=16% Similarity=0.221 Sum_probs=58.2
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEE-EEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
++||+|||+|.||..++..|.+..+ .+|. ++++++++++++. +
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~~-----~~l~av~d~~~~~~~~~~---------~---------------------- 46 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNAD-----ARLVAVADAFPAAAEAIA---------G---------------------- 46 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTT-----EEEEEEECSSHHHHHHHH---------H----------------------
T ss_pred ceEEEEECCCHHHHHHHHHHhhCCC-----cEEEEEECCCHHHHHHHH---------H----------------------
Confidence 4799999999999999999987513 6765 7888876543211 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHh
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISR 182 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~--~aDlIIlaVps~~~~~vl~~i~~ 182 (333)
.+ .+. .+|+++.+. +.|+|++|+|+....+++.....
T Consensus 47 ---~~--------------------~~~-~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~ 85 (331)
T 4hkt_A 47 ---AY--------------------GCE-VRTIDAIEAAADIDAVVICTPTDTHADLIERFAR 85 (331)
T ss_dssp ---HT--------------------TCE-ECCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHH
T ss_pred ---Hh--------------------CCC-cCCHHHHhcCCCCCEEEEeCCchhHHHHHHHHHH
Confidence 00 233 577888776 78999999999887777766543
No 165
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=97.96 E-value=1.1e-05 Score=77.32 Aligned_cols=93 Identities=14% Similarity=0.058 Sum_probs=67.5
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
-++|+|||.|.||..+|..+... | ++|..|+++.+.. .. ..
T Consensus 165 g~tvgIIGlG~IG~~vA~~l~~~-G-----~~V~~~d~~~~~~-~~--------------------------~~------ 205 (335)
T 2g76_A 165 GKTLGILGLGRIGREVATRMQSF-G-----MKTIGYDPIISPE-VS--------------------------AS------ 205 (335)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEECSSSCHH-HH--------------------------HH------
T ss_pred cCEEEEEeECHHHHHHHHHHHHC-C-----CEEEEECCCcchh-hh--------------------------hh------
Confidence 47999999999999999999877 7 8999999987531 00 00
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHhhhhccCCCCEEEEeeecC
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-~~~~vl-~~i~~~l~~~~~~~~Ivs~~kGi 200 (333)
. .+.. .++++.++.+|+|++++|.. .++.++ ++....+++ ++++|.++.|=
T Consensus 206 ---~--------------------g~~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~---gailIN~arg~ 258 (335)
T 2g76_A 206 ---F--------------------GVQQ-LPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKK---GVRVVNCARGG 258 (335)
T ss_dssp ---T--------------------TCEE-CCHHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCT---TEEEEECSCTT
T ss_pred ---c--------------------Ccee-CCHHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCC---CcEEEECCCcc
Confidence 0 1222 36788899999999999976 355555 345555666 78888887763
Q ss_pred c
Q 019978 201 E 201 (333)
Q Consensus 201 ~ 201 (333)
.
T Consensus 259 v 259 (335)
T 2g76_A 259 I 259 (335)
T ss_dssp S
T ss_pred c
Confidence 3
No 166
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=97.96 E-value=6.4e-06 Score=78.73 Aligned_cols=96 Identities=16% Similarity=0.235 Sum_probs=67.8
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
-++|+|||.|.||..+|..+... | ++|..|+|++...+.. ...
T Consensus 145 g~tvGIIG~G~IG~~vA~~l~~~-G-----~~V~~~d~~~~~~~~~--------------------------~~~----- 187 (330)
T 4e5n_A 145 NATVGFLGMGAIGLAMADRLQGW-G-----ATLQYHEAKALDTQTE--------------------------QRL----- 187 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHTTTS-C-----CEEEEECSSCCCHHHH--------------------------HHH-----
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC-C-----CEEEEECCCCCcHhHH--------------------------Hhc-----
Confidence 37999999999999999999876 7 8999999987432110 000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHhhhhccCCCCEEEEeeecC
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-~~~~vl-~~i~~~l~~~~~~~~Ivs~~kGi 200 (333)
.+.. .++++.+..+|+|++++|.. .+..++ ++....+++ ++++|.++.|=
T Consensus 188 ------------------------g~~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~---gailIN~arg~ 239 (330)
T 4e5n_A 188 ------------------------GLRQ-VACSELFASSDFILLALPLNADTLHLVNAELLALVRP---GALLVNPCRGS 239 (330)
T ss_dssp ------------------------TEEE-CCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCT---TEEEEECSCGG
T ss_pred ------------------------Ccee-CCHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCC---CcEEEECCCCc
Confidence 1222 36888899999999999954 343333 344455666 78899988774
Q ss_pred ccc
Q 019978 201 EAE 203 (333)
Q Consensus 201 ~~~ 203 (333)
...
T Consensus 240 ~vd 242 (330)
T 4e5n_A 240 VVD 242 (330)
T ss_dssp GBC
T ss_pred hhC
Confidence 443
No 167
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=97.95 E-value=1.6e-05 Score=66.93 Aligned_cols=75 Identities=19% Similarity=0.028 Sum_probs=54.4
Q ss_pred CceEEEECC----CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcch-hhhhhhhHHHHHhhhhhHHHHhhhcccccchh
Q 019978 43 PLRIVGVGA----GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV-DRATAEHLFEVINSREDVLRRLIRRCAYLKYV 117 (333)
Q Consensus 43 ~~kI~IIGa----G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~-~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~ 117 (333)
+.+|+|||+ |.||..++..|.+. | ++ +|..+++.. ++ ..
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~-G-----~~--v~~vnp~~~g~~--------------------------i~-- 56 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQ-G-----YH--VIPVSPKVAGKT--------------------------LL-- 56 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHH-T-----CC--EEEECSSSTTSE--------------------------ET--
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHC-C-----CE--EEEeCCcccccc--------------------------cC--
Confidence 458999999 89999999999998 8 76 455555321 10 00
Q ss_pred hhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHh
Q 019978 118 EARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISR 182 (333)
Q Consensus 118 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~ 182 (333)
.+.+..++++..+..|++++++|+....++++++..
T Consensus 57 -----------------------------G~~~~~sl~el~~~~Dlvii~vp~~~v~~v~~~~~~ 92 (145)
T 2duw_A 57 -----------------------------GQQGYATLADVPEKVDMVDVFRNSEAAWGVAQEAIA 92 (145)
T ss_dssp -----------------------------TEECCSSTTTCSSCCSEEECCSCSTHHHHHHHHHHH
T ss_pred -----------------------------CeeccCCHHHcCCCCCEEEEEeCHHHHHHHHHHHHH
Confidence 223334454555678999999999999999988776
No 168
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=97.93 E-value=2e-05 Score=75.34 Aligned_cols=108 Identities=11% Similarity=0.086 Sum_probs=69.5
Q ss_pred CCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 41 ~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
...+||+|||+|.||.++|..|+.. |.. .+|.++|+++++++... +. |++ ...+..
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~-~~~---~el~L~Di~~~~~~g~a-------~D-----L~~----~~~~~~---- 72 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMK-DLA---DELALVDVIEDKLKGEM-------MD-----LQH----GSLFLK---- 72 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHT-TCC---SEEEEECSCHHHHHHHH-------HH-----HHH----TGGGCS----
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-CCC---ceEEEEeCChHHHHHHH-------Hh-----hhh----hhhccC----
Confidence 4568999999999999999999988 711 28999999876543211 00 010 000000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEec--Cc--------------hhHHHHHHHHHhhh
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL--PS--------------TETKEVFEEISRYW 184 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaV--ps--------------~~~~~vl~~i~~~l 184 (333)
...+..++|.+ ++++||+||++. |. ..+.++.+.+.++.
T Consensus 73 ------------------------~~~i~~~~d~~-~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~ 127 (331)
T 4aj2_A 73 ------------------------TPKIVSSKDYS-VTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYS 127 (331)
T ss_dssp ------------------------CCEEEECSSGG-GGTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC
T ss_pred ------------------------CCeEEEcCCHH-HhCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHC
Confidence 01355567776 589999999975 22 13566666777663
Q ss_pred hccCCCCEEEEeeecCc
Q 019978 185 KERITVPVIISLAKGVE 201 (333)
Q Consensus 185 ~~~~~~~~Ivs~~kGi~ 201 (333)
+ +..++.++|-..
T Consensus 128 -p---~a~vlvvtNPvd 140 (331)
T 4aj2_A 128 -P---QCKLLIVSNPVD 140 (331)
T ss_dssp -T---TCEEEECSSSHH
T ss_pred -C---CeEEEEecChHH
Confidence 3 577887776544
No 169
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=97.91 E-value=3.3e-05 Score=69.51 Aligned_cols=96 Identities=15% Similarity=0.282 Sum_probs=62.8
Q ss_pred hHHhhhHHHHhhccCCCCCceEEEECCCHHHHHHHHH--HHHhcCCCCCCee-EEEEecCCcchhhhhhhhHHHHHhhhh
Q 019978 25 LEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAM--LQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSRE 101 (333)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~alA~~--La~~~G~~~~~~~-V~l~~r~~~~~~~~~~~~l~~~i~~~~ 101 (333)
+++-+.++++..|... .+||+|||+|.+|.+++.. +... | ++ |-++|.+++++.+
T Consensus 69 v~~L~~~~~~~lg~~~--~~rV~IIGAG~~G~~La~~~~~~~~-g-----~~iVg~~D~dp~k~g~-------------- 126 (215)
T 2vt3_A 69 VDYLLSFFRKTLDQDE--MTDVILIGVGNLGTAFLHYNFTKNN-N-----TKISMAFDINESKIGT-------------- 126 (215)
T ss_dssp HHHHHHHHHHHHHHC-----CEEEECCSHHHHHHHHCC------------CCEEEEEESCTTTTTC--------------
T ss_pred hHHHHHHHHHHhCcCC--CCEEEEEccCHHHHHHHHHHhcccC-C-----cEEEEEEeCCHHHHHh--------------
Confidence 3444555666666543 3699999999999999995 3333 4 55 4578888865421
Q ss_pred hHHHHhhhcccccchhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHH
Q 019978 102 DVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEIS 181 (333)
Q Consensus 102 ~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~ 181 (333)
...++ ++...+++++.+++.|++++|+|+....++++.+.
T Consensus 127 -----------~i~gv-----------------------------~V~~~~dl~eli~~~D~ViIAvPs~~~~ei~~~l~ 166 (215)
T 2vt3_A 127 -----------EVGGV-----------------------------PVYNLDDLEQHVKDESVAILTVPAVAAQSITDRLV 166 (215)
T ss_dssp -----------EETTE-----------------------------EEEEGGGHHHHCSSCCEEEECSCHHHHHHHHHHHH
T ss_pred -----------HhcCC-----------------------------eeechhhHHHHHHhCCEEEEecCchhHHHHHHHHH
Confidence 11110 24456778887766699999999998888888876
Q ss_pred h
Q 019978 182 R 182 (333)
Q Consensus 182 ~ 182 (333)
.
T Consensus 167 ~ 167 (215)
T 2vt3_A 167 A 167 (215)
T ss_dssp H
T ss_pred H
Confidence 5
No 170
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=97.91 E-value=2.8e-05 Score=73.56 Aligned_cols=39 Identities=18% Similarity=0.135 Sum_probs=32.9
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
|||+|||+|++|++++..|+.. +.+ .++.++|+++++++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~-~~~---~el~L~Di~~~k~~ 39 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALL-GVA---REVVLVDLDRKLAQ 39 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCC---SEEEEECSSHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCC---CEEEEEeCChhHHH
Confidence 7999999999999999999887 522 48999999976543
No 171
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=97.90 E-value=4.1e-05 Score=72.58 Aligned_cols=81 Identities=17% Similarity=0.189 Sum_probs=57.7
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEE-EEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
++||+|||+|.||..++..|.+. . +.++. ++++++++++++.. . +.
T Consensus 2 ~~rvgiIG~G~~g~~~~~~l~~~-~----~~~l~av~d~~~~~~~~~~~--------~--------------~~------ 48 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTIHAENLKMI-D----DAILYAISDVREDRLREMKE--------K--------------LG------ 48 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHGGGS-T----TEEEEEEECSCHHHHHHHHH--------H--------------HT------
T ss_pred eeEEEEEcCCHHHHHHHHHHHhC-C----CcEEEEEECCCHHHHHHHHH--------H--------------hC------
Confidence 36999999999999999998764 2 16655 78888765432110 0 00
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHH
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEIS 181 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~--~aDlIIlaVps~~~~~vl~~i~ 181 (333)
-..+.+|+++.+. ++|+|++|+|+....+++....
T Consensus 49 -------------------------~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al 85 (344)
T 3ezy_A 49 -------------------------VEKAYKDPHELIEDPNVDAVLVCSSTNTHSELVIACA 85 (344)
T ss_dssp -------------------------CSEEESSHHHHHHCTTCCEEEECSCGGGHHHHHHHHH
T ss_pred -------------------------CCceeCCHHHHhcCCCCCEEEEcCCCcchHHHHHHHH
Confidence 0135678888777 7999999999998777766554
No 172
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=97.90 E-value=1.2e-05 Score=76.86 Aligned_cols=91 Identities=19% Similarity=0.230 Sum_probs=64.9
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
++|+|||.|.||..+|..+... | ++|+.|+|+++.. + .+ .
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~-G-----~~V~~~d~~~~~~--~---------~~-------------~---------- 186 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVFMQIMEGF-G-----AKVITYDIFRNPE--L---------EK-------------K---------- 186 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCHH--H---------HH-------------T----------
T ss_pred CEEEEEccCHHHHHHHHHHHHC-C-----CEEEEECCCcchh--H---------Hh-------------h----------
Confidence 7999999999999999999887 8 8999999987531 0 00 0
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHhhhhccCCCCEEEEeeecCc
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGVE 201 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-~~~~vl-~~i~~~l~~~~~~~~Ivs~~kGi~ 201 (333)
+...+++++.+..+|+|++++|.. .++.++ +.....+++ ++++|+++.|=.
T Consensus 187 ------------------------~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~---ga~lIn~arg~~ 239 (333)
T 1j4a_A 187 ------------------------GYYVDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQ---DVVIVNVSRGPL 239 (333)
T ss_dssp ------------------------TCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCT---TEEEEECSCGGG
T ss_pred ------------------------CeecCCHHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCC---CcEEEECCCCcc
Confidence 011236778888999999999964 344444 233345565 688888877633
No 173
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=97.90 E-value=5.2e-05 Score=71.88 Aligned_cols=82 Identities=18% Similarity=0.168 Sum_probs=58.1
Q ss_pred CceEEEECCCHHHHHHHHHHH-HhcCCCCCCeeEE-EEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQ-DSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La-~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
++||+|||+|.||..++..+. ...+ .++. ++++++++++++. +. + .
T Consensus 2 ~~rigiIG~G~~g~~~~~~l~~~~~~-----~~l~av~d~~~~~~~~~~---------~~------------~-g----- 49 (344)
T 3mz0_A 2 SLRIGVIGTGAIGKEHINRITNKLSG-----AEIVAVTDVNQEAAQKVV---------EQ------------Y-Q----- 49 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCSS-----EEEEEEECSSHHHHHHHH---------HH------------T-T-----
T ss_pred eEEEEEECccHHHHHHHHHHHhhCCC-----cEEEEEEcCCHHHHHHHH---------HH------------h-C-----
Confidence 369999999999999999998 4313 6655 7888876543211 00 0 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcC--CCEEEEecCchhHHHHHHHHH
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD--ADIVINGLPSTETKEVFEEIS 181 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~--aDlIIlaVps~~~~~vl~~i~ 181 (333)
....+.+|+++.+++ .|+|++|+|+....+++....
T Consensus 50 -------------------------~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al 87 (344)
T 3mz0_A 50 -------------------------LNATVYPNDDSLLADENVDAVLVTSWGPAHESSVLKAI 87 (344)
T ss_dssp -------------------------CCCEEESSHHHHHHCTTCCEEEECSCGGGHHHHHHHHH
T ss_pred -------------------------CCCeeeCCHHHHhcCCCCCEEEECCCchhHHHHHHHHH
Confidence 014566888888765 899999999988777776654
No 174
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=97.89 E-value=6.2e-05 Score=72.01 Aligned_cols=83 Identities=19% Similarity=0.173 Sum_probs=58.9
Q ss_pred CceEEEECCCHHHHHHHHHHH-HhcCCCCCCeeEE-EEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQ-DSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La-~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
++||+|||+|.||..++..+. ...+ .+|. ++++++++++++.. . + .
T Consensus 23 ~~rvgiIG~G~~g~~~~~~l~~~~~~-----~~lvav~d~~~~~~~~~a~--------~-------------~-g----- 70 (357)
T 3ec7_A 23 TLKAGIVGIGMIGSDHLRRLANTVSG-----VEVVAVCDIVAGRAQAALD--------K-------------Y-A----- 70 (357)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCTT-----EEEEEEECSSTTHHHHHHH--------H-------------H-T-----
T ss_pred eeeEEEECCcHHHHHHHHHHHhhCCC-----cEEEEEEeCCHHHHHHHHH--------H-------------h-C-----
Confidence 479999999999999999998 3313 6755 78999876543210 0 0 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHh
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISR 182 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~--~aDlIIlaVps~~~~~vl~~i~~ 182 (333)
......+|+++.+. +.|+|++|+|.....+++.....
T Consensus 71 -------------------------~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~ 109 (357)
T 3ec7_A 71 -------------------------IEAKDYNDYHDLINDKDVEVVIITASNEAHADVAVAALN 109 (357)
T ss_dssp -------------------------CCCEEESSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHH
T ss_pred -------------------------CCCeeeCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHH
Confidence 01345678888776 58999999999887777765543
No 175
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=97.87 E-value=1.8e-05 Score=76.10 Aligned_cols=92 Identities=21% Similarity=0.259 Sum_probs=65.8
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
++|+|||.|.||..+|..+... | .+|+.|+|+++.. ...
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~-G-----~~V~~~d~~~~~~----------------------------~~~------- 187 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAM-G-----AKVIAYDVAYNPE----------------------------FEP------- 187 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCGG----------------------------GTT-------
T ss_pred CeEEEEecCHHHHHHHHHHhhC-C-----CEEEEECCChhhh----------------------------hhc-------
Confidence 7999999999999999999877 8 8999999987421 000
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHhhhhccCCCCEEEEeeecCc
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGVE 201 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-~~~~vl-~~i~~~l~~~~~~~~Ivs~~kGi~ 201 (333)
.+.. .++++++..||+|++++|.. .+..++ ++....+++ ++++|.++.|=.
T Consensus 188 -----------------------~~~~-~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~---gailIN~aRg~~ 240 (343)
T 2yq5_A 188 -----------------------FLTY-TDFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMKK---SAYLINCARGEL 240 (343)
T ss_dssp -----------------------TCEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCT---TCEEEECSCGGG
T ss_pred -----------------------cccc-cCHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCC---CcEEEECCCChh
Confidence 1122 27888899999999999953 233222 233344566 789999887744
Q ss_pred cc
Q 019978 202 AE 203 (333)
Q Consensus 202 ~~ 203 (333)
..
T Consensus 241 vd 242 (343)
T 2yq5_A 241 VD 242 (343)
T ss_dssp BC
T ss_pred hh
Confidence 43
No 176
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=97.87 E-value=1.6e-05 Score=76.07 Aligned_cols=93 Identities=24% Similarity=0.256 Sum_probs=66.2
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
++|+|||.|.||..+|..+... | ++|..|+|+++.... + .
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~-G-----~~V~~~d~~~~~~~~-----------~---------------~-------- 181 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAF-G-----MKVLCYDVVKREDLK-----------E---------------K-------- 181 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCHHHH-----------H---------------T--------
T ss_pred ceEEEECcCHHHHHHHHHHHHC-c-----CEEEEECCCcchhhH-----------h---------------c--------
Confidence 7999999999999999999887 8 999999998753210 0 0
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHhhhhccCCCCEEEEeeecCc
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGVE 201 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-~~~~vl-~~i~~~l~~~~~~~~Ivs~~kGi~ 201 (333)
.+.. .++++++..||+|++++|.. .+..++ ++....+++ ++++|.++.|=.
T Consensus 182 -----------------------g~~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~---gailIN~aRg~~ 234 (334)
T 2pi1_A 182 -----------------------GCVY-TSLDELLKESDVISLHVPYTKETHHMINEERISLMKD---GVYLINTARGKV 234 (334)
T ss_dssp -----------------------TCEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCT---TEEEEECSCGGG
T ss_pred -----------------------Ccee-cCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCC---CcEEEECCCCcc
Confidence 1222 34888899999999999953 333333 233444566 788888887744
Q ss_pred cc
Q 019978 202 AE 203 (333)
Q Consensus 202 ~~ 203 (333)
..
T Consensus 235 vd 236 (334)
T 2pi1_A 235 VD 236 (334)
T ss_dssp BC
T ss_pred cC
Confidence 43
No 177
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.87 E-value=3.4e-05 Score=72.92 Aligned_cols=82 Identities=15% Similarity=0.085 Sum_probs=58.8
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEE-EEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
.++||+|||+|.||..++..|.+. . +.+|. ++++++++++++.. . +
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~-~----~~~l~av~d~~~~~~~~~~~--------~-------------~------- 50 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRES-A----QAEVRGIASRRLENAQKMAK--------E-------------L------- 50 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHS-S----SEEEEEEBCSSSHHHHHHHH--------H-------------T-------
T ss_pred CeEEEEEECchHHHHHHHHHHHhC-C----CcEEEEEEeCCHHHHHHHHH--------H-------------c-------
Confidence 357999999999999999999875 2 16665 78888875442110 0 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCe-EEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHh
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPL-KVVTNLQEAVW--DADIVINGLPSTETKEVFEEISR 182 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i-~~t~d~~ea~~--~aDlIIlaVps~~~~~vl~~i~~ 182 (333)
.+ .+.+|+++.+. ++|+|++|+|+....+++.....
T Consensus 51 --------------------------~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~ 89 (330)
T 3e9m_A 51 --------------------------AIPVAYGSYEELCKDETIDIIYIPTYNQGHYSAAKLALS 89 (330)
T ss_dssp --------------------------TCCCCBSSHHHHHHCTTCSEEEECCCGGGHHHHHHHHHH
T ss_pred --------------------------CCCceeCCHHHHhcCCCCCEEEEcCCCHHHHHHHHHHHH
Confidence 11 24577888776 78999999999987777766543
No 178
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=97.86 E-value=1.4e-05 Score=76.33 Aligned_cols=91 Identities=18% Similarity=0.172 Sum_probs=65.3
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
++|+|||.|.||..+|..+... | ++|+.|+|+++.. ...
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~-G-----~~V~~~d~~~~~~----------------------------~~~------- 185 (331)
T 1xdw_A 147 CTVGVVGLGRIGRVAAQIFHGM-G-----ATVIGEDVFEIKG----------------------------IED------- 185 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCCS----------------------------CTT-------
T ss_pred CEEEEECcCHHHHHHHHHHHHC-C-----CEEEEECCCccHH----------------------------HHh-------
Confidence 7999999999999999999887 8 8999999987421 000
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHhhhhccCCCCEEEEeeecCc
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGVE 201 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-~~~~vl-~~i~~~l~~~~~~~~Ivs~~kGi~ 201 (333)
.+. ..++++.+..+|+|++++|.. .+..++ ++....+++ ++++|.++.|=.
T Consensus 186 -----------------------~~~-~~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~---ga~lin~srg~~ 238 (331)
T 1xdw_A 186 -----------------------YCT-QVSLDEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKD---GAILVNCARGQL 238 (331)
T ss_dssp -----------------------TCE-ECCHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCT---TEEEEECSCGGG
T ss_pred -----------------------ccc-cCCHHHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCC---CcEEEECCCccc
Confidence 011 236778888999999999964 333333 233344666 788888887743
Q ss_pred c
Q 019978 202 A 202 (333)
Q Consensus 202 ~ 202 (333)
.
T Consensus 239 v 239 (331)
T 1xdw_A 239 V 239 (331)
T ss_dssp B
T ss_pred c
Confidence 3
No 179
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=97.85 E-value=7.1e-05 Score=71.40 Aligned_cols=94 Identities=19% Similarity=0.161 Sum_probs=63.4
Q ss_pred CceEEEECCCHHHH-HHHHHHHHhcCCCCCCeeEE-EEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 43 PLRIVGVGAGAWGS-VFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 43 ~~kI~IIGaG~mG~-alA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
++||+|||+|.||. .++..|.+. . +.+|. ++++++++++++. +.
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~-~----~~~l~av~d~~~~~~~~~a---------~~-------------------- 72 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAE-P----LTEVTAIASRRWDRAKRFT---------ER-------------------- 72 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHC-T----TEEEEEEEESSHHHHHHHH---------HH--------------------
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhC-C----CeEEEEEEcCCHHHHHHHH---------HH--------------------
Confidence 48999999999998 788888765 2 26765 7898876543211 00
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeee
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~--~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~k 198 (333)
+ .+...+|+++.+. +.|+|++|+|.....+++..... . ++.|+ +-|
T Consensus 73 -----~--------------------g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~---a---Gk~Vl-~EK 120 (350)
T 3rc1_A 73 -----F--------------------GGEPVEGYPALLERDDVDAVYVPLPAVLHAEWIDRALR---A---GKHVL-AEK 120 (350)
T ss_dssp -----H--------------------CSEEEESHHHHHTCTTCSEEEECCCGGGHHHHHHHHHH---T---TCEEE-EES
T ss_pred -----c--------------------CCCCcCCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHH---C---CCcEE-EeC
Confidence 0 2333478888876 58999999999988777766543 2 44443 555
Q ss_pred cCcc
Q 019978 199 GVEA 202 (333)
Q Consensus 199 Gi~~ 202 (333)
-+..
T Consensus 121 P~a~ 124 (350)
T 3rc1_A 121 PLTT 124 (350)
T ss_dssp SSCS
T ss_pred CCCC
Confidence 5443
No 180
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=97.85 E-value=1.8e-05 Score=75.54 Aligned_cols=89 Identities=15% Similarity=0.179 Sum_probs=64.5
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
++|+|||.|.||..+|..+... | ++|+.|+|+++.. ...
T Consensus 146 ~~vgIiG~G~IG~~~A~~l~~~-G-----~~V~~~d~~~~~~----------------------------~~~------- 184 (333)
T 1dxy_A 146 QTVGVMGTGHIGQVAIKLFKGF-G-----AKVIAYDPYPMKG----------------------------DHP------- 184 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCSS----------------------------CCT-------
T ss_pred CEEEEECcCHHHHHHHHHHHHC-C-----CEEEEECCCcchh----------------------------hHh-------
Confidence 7999999999999999999877 8 8999999987421 000
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh-HHHHH-HHHHhhhhccCCCCEEEEeeecC
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-TKEVF-EEISRYWKERITVPVIISLAKGV 200 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~-~~~vl-~~i~~~l~~~~~~~~Ivs~~kGi 200 (333)
.+.. .++++.+..+|+|++++|... +..++ ++....+++ ++++|.++.|=
T Consensus 185 -----------------------~~~~-~~l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~---ga~lIn~srg~ 236 (333)
T 1dxy_A 185 -----------------------DFDY-VSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKP---GAIVINTARPN 236 (333)
T ss_dssp -----------------------TCEE-CCHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCT---TEEEEECSCTT
T ss_pred -----------------------cccc-CCHHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCC---CcEEEECCCCc
Confidence 0112 367788899999999999653 44333 334445666 67888887663
No 181
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=97.85 E-value=3.3e-05 Score=72.02 Aligned_cols=92 Identities=15% Similarity=0.223 Sum_probs=62.4
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
-++|+|||+|.+|.++|..+... | .+|++|+|+++..+.+ .+ + +.
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~-G-----~~V~~~dr~~~~~~~~---------~~--------------~-g~----- 199 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAAL-G-----AKVKVGARESDLLARI---------AE--------------M-GM----- 199 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESSHHHHHHH---------HH--------------T-TS-----
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-C-----CEEEEEECCHHHHHHH---------HH--------------C-CC-----
Confidence 47999999999999999999887 8 8999999987543211 00 0 00
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeec
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kG 199 (333)
......++++.+..+|+|++++|...+.+ +....+++ +.++|.++-|
T Consensus 200 ------------------------~~~~~~~l~~~l~~aDvVi~~~p~~~i~~---~~l~~mk~---~~~lin~ar~ 246 (293)
T 3d4o_A 200 ------------------------EPFHISKAAQELRDVDVCINTIPALVVTA---NVLAEMPS---HTFVIDLASK 246 (293)
T ss_dssp ------------------------EEEEGGGHHHHTTTCSEEEECCSSCCBCH---HHHHHSCT---TCEEEECSST
T ss_pred ------------------------eecChhhHHHHhcCCCEEEECCChHHhCH---HHHHhcCC---CCEEEEecCC
Confidence 01112457777889999999999854322 12223455 6788887643
No 182
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=97.84 E-value=6.8e-05 Score=70.72 Aligned_cols=94 Identities=13% Similarity=0.097 Sum_probs=64.4
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeE-EEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
++||+|||+|.||..++..+... + +.+| -++++++++++++. .
T Consensus 5 ~~rigiiG~G~ig~~~~~~l~~~-~----~~~~~av~d~~~~~~~~~a-------------------------~------ 48 (329)
T 3evn_A 5 KVRYGVVSTAKVAPRFIEGVRLA-G----NGEVVAVSSRTLESAQAFA-------------------------N------ 48 (329)
T ss_dssp CEEEEEEBCCTTHHHHHHHHHHH-C----SEEEEEEECSCSSTTCC----------------------------------
T ss_pred ceEEEEEechHHHHHHHHHHHhC-C----CcEEEEEEcCCHHHHHHHH-------------------------H------
Confidence 57999999999999999998876 4 1554 47899887654311 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCe-EEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeee
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPL-KVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i-~~t~d~~ea~~--~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~k 198 (333)
.+ .+ .+.+|+++.+. +.|+|++|+|+....+++..... . ++.|+ +-|
T Consensus 49 ---~~--------------------~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~---a---Gk~Vl-~EK 98 (329)
T 3evn_A 49 ---KY--------------------HLPKAYDKLEDMLADESIDVIYVATINQDHYKVAKAALL---A---GKHVL-VEK 98 (329)
T ss_dssp ---CC--------------------CCSCEESCHHHHHTCTTCCEEEECSCGGGHHHHHHHHHH---T---TCEEE-EES
T ss_pred ---Hc--------------------CCCcccCCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHH---C---CCeEE-Ecc
Confidence 00 12 25678888887 78999999999887777665443 2 44443 455
Q ss_pred cCcc
Q 019978 199 GVEA 202 (333)
Q Consensus 199 Gi~~ 202 (333)
-+..
T Consensus 99 P~a~ 102 (329)
T 3evn_A 99 PFTL 102 (329)
T ss_dssp SCCS
T ss_pred CCcC
Confidence 5443
No 183
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.84 E-value=5.1e-05 Score=72.22 Aligned_cols=80 Identities=20% Similarity=0.393 Sum_probs=56.6
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEE-EEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
++||+|||+|.||..++..+.+. . +.+|. ++++++++++++.. . +
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~-~----~~~lvav~d~~~~~~~~~~~--------~-------------~-------- 50 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYTKS-E----KLKLVTCYSRTEDKREKFGK--------R-------------Y-------- 50 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTC-S----SEEEEEEECSSHHHHHHHHH--------H-------------H--------
T ss_pred cceEEEEccCHHHHHHHHHHHhC-C----CcEEEEEECCCHHHHHHHHH--------H-------------c--------
Confidence 57999999999999999988765 2 26754 88998865442110 0 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHh--cCCCEEEEecCchhHHHHHHHHH
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAV--WDADIVINGLPSTETKEVFEEIS 181 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~--~~aDlIIlaVps~~~~~vl~~i~ 181 (333)
.+...+|+++.+ .+.|+|++|+|+....+++....
T Consensus 51 -------------------------g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al 87 (354)
T 3db2_A 51 -------------------------NCAGDATMEALLAREDVEMVIITVPNDKHAEVIEQCA 87 (354)
T ss_dssp -------------------------TCCCCSSHHHHHHCSSCCEEEECSCTTSHHHHHHHHH
T ss_pred -------------------------CCCCcCCHHHHhcCCCCCEEEEeCChHHHHHHHHHHH
Confidence 122347788877 56899999999987777766544
No 184
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=97.83 E-value=2.7e-05 Score=72.80 Aligned_cols=93 Identities=22% Similarity=0.267 Sum_probs=63.8
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
..++|+|||+|.+|.++|..+... | .+|++|+|++++.+.+. + + +.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~-G-----~~V~~~d~~~~~~~~~~---------~--------------~-g~---- 201 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAAL-G-----ANVKVGARSSAHLARIT---------E--------------M-GL---- 201 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESSHHHHHHHH---------H--------------T-TC----
T ss_pred CCCEEEEEcccHHHHHHHHHHHHC-C-----CEEEEEECCHHHHHHHH---------H--------------C-CC----
Confidence 347999999999999999999887 8 89999999875432110 0 0 00
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeec
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kG 199 (333)
......++++.++++|+|++++|...+.+ .....+++ +.++|.++-|
T Consensus 202 -------------------------~~~~~~~l~~~l~~aDvVi~~~p~~~i~~---~~~~~mk~---g~~lin~a~g 248 (300)
T 2rir_A 202 -------------------------VPFHTDELKEHVKDIDICINTIPSMILNQ---TVLSSMTP---KTLILDLASR 248 (300)
T ss_dssp -------------------------EEEEGGGHHHHSTTCSEEEECCSSCCBCH---HHHTTSCT---TCEEEECSST
T ss_pred -------------------------eEEchhhHHHHhhCCCEEEECCChhhhCH---HHHHhCCC---CCEEEEEeCC
Confidence 01112467778889999999999854322 12234555 6788887654
No 185
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=97.82 E-value=1.5e-05 Score=77.57 Aligned_cols=91 Identities=23% Similarity=0.253 Sum_probs=64.1
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
++|+|||.|.||..+|..+... | ++|..|++..+... .
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~-G-----~~V~~~d~~~~~~~----------------------------~-------- 157 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEAL-G-----IRTLLCDPPRAARG----------------------------D-------- 157 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECHHHHHTT----------------------------C--------
T ss_pred CEEEEEeECHHHHHHHHHHHHC-C-----CEEEEECCChHHhc----------------------------c--------
Confidence 7999999999999999999887 8 99999988532100 0
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh-----HHHHH-HHHHhhhhccCCCCEEEEee
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-----TKEVF-EEISRYWKERITVPVIISLA 197 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~-----~~~vl-~~i~~~l~~~~~~~~Ivs~~ 197 (333)
.. ...+++++++.||+|++++|... +..++ ++....+++ ++++|.++
T Consensus 158 -----------------------~~-~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~---gailIN~a 210 (381)
T 3oet_A 158 -----------------------EG-DFRTLDELVQEADVLTFHTPLYKDGPYKTLHLADETLIRRLKP---GAILINAC 210 (381)
T ss_dssp -----------------------CS-CBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBCHHHHHHSCT---TEEEEECS
T ss_pred -----------------------Cc-ccCCHHHHHhhCCEEEEcCcCCccccccchhhcCHHHHhcCCC---CcEEEECC
Confidence 00 12468888999999999999442 22222 223334565 78899988
Q ss_pred ecCccc
Q 019978 198 KGVEAE 203 (333)
Q Consensus 198 kGi~~~ 203 (333)
.|=...
T Consensus 211 RG~vvd 216 (381)
T 3oet_A 211 RGPVVD 216 (381)
T ss_dssp CGGGBC
T ss_pred CCcccC
Confidence 775443
No 186
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=97.81 E-value=3.1e-05 Score=75.02 Aligned_cols=94 Identities=17% Similarity=0.159 Sum_probs=65.9
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
++|+|||.|.||..+|..+..- | .+|..|+++... +.. ..
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~f-G-----~~V~~~d~~~~~-~~~--------------------------~~------- 216 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGF-R-----ARIRVFDPWLPR-SML--------------------------EE------- 216 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTS-C-----CEEEEECSSSCH-HHH--------------------------HH-------
T ss_pred CEEEEecCCcccHHHHHhhhhC-C-----CEEEEECCCCCH-HHH--------------------------hh-------
Confidence 7999999999999999998766 7 899999987531 100 00
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHhhhhccCCCCEEEEeeecCc
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGVE 201 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-~~~~vl-~~i~~~l~~~~~~~~Ivs~~kGi~ 201 (333)
..+. ..++++.+..+|+|++++|.. .++.++ ++....+++ ++++|.++.|=.
T Consensus 217 ----------------------~g~~-~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~---gailIN~aRG~~ 270 (365)
T 4hy3_A 217 ----------------------NGVE-PASLEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRR---GAAFILLSRADV 270 (365)
T ss_dssp ----------------------TTCE-ECCHHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCT---TCEEEECSCGGG
T ss_pred ----------------------cCee-eCCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCC---CcEEEECcCCch
Confidence 0122 247888899999999999965 454444 344455666 789999887744
Q ss_pred cc
Q 019978 202 AE 203 (333)
Q Consensus 202 ~~ 203 (333)
..
T Consensus 271 vd 272 (365)
T 4hy3_A 271 VD 272 (365)
T ss_dssp SC
T ss_pred hC
Confidence 43
No 187
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=97.80 E-value=6.9e-05 Score=71.99 Aligned_cols=105 Identities=15% Similarity=0.183 Sum_probs=67.8
Q ss_pred CceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 43 ~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
.+||+|||+ |.+|+++|..++.. |.. .+|.++|+++++++... ++ |++ .. ++
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~-g~~---~evvLiDi~~~k~~g~a-------~D-----L~~---~~--~~------ 60 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMM-RLT---PNLCLYDPFAVGLEGVA-------EE-----IRH---CG--FE------ 60 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHT-TCC---SCEEEECSCHHHHHHHH-------HH-----HHH---HC--CT------
T ss_pred CCEEEEECCCChHHHHHHHHHHhc-CCC---CEEEEEeCCchhHHHHH-------Hh-----hhh---Cc--CC------
Confidence 479999998 99999999999887 621 48999999876543210 00 110 00 11
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEec--Cc--------------hhHHHHHHHHHhhhh
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL--PS--------------TETKEVFEEISRYWK 185 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaV--ps--------------~~~~~vl~~i~~~l~ 185 (333)
..++..++|..+++++||+||++. |. ..++++.+.+.++.+
T Consensus 61 -----------------------~~~i~~t~d~~~al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p 117 (343)
T 3fi9_A 61 -----------------------GLNLTFTSDIKEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCP 117 (343)
T ss_dssp -----------------------TCCCEEESCHHHHHTTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred -----------------------CCceEEcCCHHHHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 025777889988899999999975 22 134555556665543
Q ss_pred ccCCCCE-EEEeeecCc
Q 019978 186 ERITVPV-IISLAKGVE 201 (333)
Q Consensus 186 ~~~~~~~-Ivs~~kGi~ 201 (333)
+.. ++.++|-+.
T Consensus 118 ----~a~~vlvvsNPvd 130 (343)
T 3fi9_A 118 ----DCKHVIIIFNPAD 130 (343)
T ss_dssp ----TCCEEEECSSSHH
T ss_pred ----CcEEEEEecCchH
Confidence 453 666766543
No 188
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=97.79 E-value=9e-05 Score=70.09 Aligned_cols=101 Identities=14% Similarity=0.190 Sum_probs=66.4
Q ss_pred ceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 44 ~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
|||+|+|+ |.+|++++..|+.. |. . ++|.++|+++ .+. .. .. +.+.
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~-~~--~-~ev~L~Di~~--~~~-----~a--~d---------------L~~~----- 47 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNS-PL--V-SRLTLYDIAH--TPG-----VA--AD---------------LSHI----- 47 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTC-TT--C-SEEEEEESSS--HHH-----HH--HH---------------HTTS-----
T ss_pred CEEEEECCCChHHHHHHHHHHhC-CC--C-cEEEEEeCCc--cHH-----HH--HH---------------Hhcc-----
Confidence 79999998 99999999999987 52 1 5899999987 211 00 00 0000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEE---ecCHHHHhcCCCEEEEecC--c--------------hhHHHHHHHHHhh
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKV---VTNLQEAVWDADIVINGLP--S--------------TETKEVFEEISRY 183 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~---t~d~~ea~~~aDlIIlaVp--s--------------~~~~~vl~~i~~~ 183 (333)
..+ ..++. ++|.+++++++|+||++.. . ..+.++++.+.++
T Consensus 48 --~~~------------------~~l~~~~~t~d~~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~ 107 (314)
T 1mld_A 48 --ETR------------------ATVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQH 107 (314)
T ss_dssp --SSS------------------CEEEEEESGGGHHHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred --CcC------------------ceEEEecCCCCHHHHhCCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 000 12444 3678888999999999863 2 2366677777766
Q ss_pred hhccCCCCEEEEeeecCc
Q 019978 184 WKERITVPVIISLAKGVE 201 (333)
Q Consensus 184 l~~~~~~~~Ivs~~kGi~ 201 (333)
.+ +..++.++|-+.
T Consensus 108 ~p----~a~viv~sNPv~ 121 (314)
T 1mld_A 108 CP----DAMICIISNPVN 121 (314)
T ss_dssp CT----TSEEEECSSCHH
T ss_pred CC----CeEEEEECCCcc
Confidence 53 567776776544
No 189
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.79 E-value=5.8e-05 Score=63.08 Aligned_cols=104 Identities=7% Similarity=0.025 Sum_probs=65.5
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC-cchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG-RSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~-~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
++|.|+|+|.+|..++..|.+. | ++|+++++++ +.++++.. .... + ..-+. +
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~-g-----~~V~vid~~~~~~~~~~~~-----~~~~----------~---~~~i~---g 56 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQR-G-----QNVTVISNLPEDDIKQLEQ-----RLGD----------N---ADVIP---G 56 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECCCHHHHHHHHH-----HHCT----------T---CEEEE---S
T ss_pred CcEEEECCCHHHHHHHHHHHHC-C-----CCEEEEECCChHHHHHHHH-----hhcC----------C---CeEEE---c
Confidence 5899999999999999999998 8 9999999974 43322110 0000 0 00000 0
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHH-hcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCc
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEA-VWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea-~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~ 201 (333)
+ ..-...++++ ++++|+||++++.+.....+....+.+.+ ...++..+++..
T Consensus 57 d------------------------~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~---~~~ii~~~~~~~ 109 (153)
T 1id1_A 57 D------------------------SNDSSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDMSS---DVKTVLAVSDSK 109 (153)
T ss_dssp C------------------------TTSHHHHHHHTTTTCSEEEECSSCHHHHHHHHHHHHHHTS---SSCEEEECSSGG
T ss_pred C------------------------CCCHHHHHHcChhhCCEEEEecCChHHHHHHHHHHHHHCC---CCEEEEEECCHH
Confidence 0 0000123343 78999999999998877777776666644 455666555443
No 190
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=97.79 E-value=0.00015 Score=68.26 Aligned_cols=38 Identities=18% Similarity=0.003 Sum_probs=32.6
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcch
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (333)
|||+|||+|.+|+++|..|+.+ +.. .++.|+|.+++.+
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~-~~~---~el~L~Di~~~~~ 38 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLN-LDV---DEIALVDIAEDLA 38 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-SCC---SEEEEECSSHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCC---CEEEEEeCCCCcc
Confidence 8999999999999999999888 632 3799999987654
No 191
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.78 E-value=0.00011 Score=69.43 Aligned_cols=81 Identities=20% Similarity=0.221 Sum_probs=56.9
Q ss_pred CCceEEEECCCHHHHHHHHHHH-HhcCCCCCCee-EEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQ-DSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La-~~~G~~~~~~~-V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (333)
.++||+|||+|.||..++..+. ...+ .+ |.++++++++++++. +
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~-----~~~vav~d~~~~~~~~~a---------~-------------------- 52 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQG-----VKLVAACALDSNQLEWAK---------N-------------------- 52 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSS-----EEEEEEECSCHHHHHHHH---------H--------------------
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCC-----cEEEEEecCCHHHHHHHH---------H--------------------
Confidence 4689999999999999999987 4313 66 457888876543210 0
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCe-EEecCHHHHhc--CCCEEEEecCchhHHHHHHHHH
Q 019978 120 RLGDRTLHADEILKDGFCLNMIDTPLCPL-KVVTNLQEAVW--DADIVINGLPSTETKEVFEEIS 181 (333)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i-~~t~d~~ea~~--~aDlIIlaVps~~~~~vl~~i~ 181 (333)
.+ .+ .+.+|.++.+. ++|+|++|+|+....+++....
T Consensus 53 -----~~--------------------g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al 92 (346)
T 3cea_A 53 -----EL--------------------GVETTYTNYKDMIDTENIDAIFIVAPTPFHPEMTIYAM 92 (346)
T ss_dssp -----TT--------------------CCSEEESCHHHHHTTSCCSEEEECSCGGGHHHHHHHHH
T ss_pred -----Hh--------------------CCCcccCCHHHHhcCCCCCEEEEeCChHhHHHHHHHHH
Confidence 00 11 34577888776 6899999999987776666543
No 192
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=97.76 E-value=1.2e-05 Score=78.42 Aligned_cols=91 Identities=16% Similarity=0.220 Sum_probs=64.7
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
-++|+|||.|.||..+|..|... | ++|..|+++.+..+ .
T Consensus 116 g~tvGIIGlG~IG~~vA~~l~~~-G-----~~V~~~d~~~~~~~---------------------------~-------- 154 (380)
T 2o4c_A 116 ERTYGVVGAGQVGGRLVEVLRGL-G-----WKVLVCDPPRQARE---------------------------P-------- 154 (380)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECHHHHHHS---------------------------T--------
T ss_pred CCEEEEEeCCHHHHHHHHHHHHC-C-----CEEEEEcCChhhhc---------------------------c--------
Confidence 47999999999999999999887 8 89999988643100 0
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh-----HHHHH-HHHHhhhhccCCCCEEEEe
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-----TKEVF-EEISRYWKERITVPVIISL 196 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~-----~~~vl-~~i~~~l~~~~~~~~Ivs~ 196 (333)
... ..++++.+..||+|++++|... +..++ ++....+++ ++++|.+
T Consensus 155 ------------------------g~~-~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk~---gailIN~ 206 (380)
T 2o4c_A 155 ------------------------DGE-FVSLERLLAEADVISLHTPLNRDGEHPTRHLLDEPRLAALRP---GTWLVNA 206 (380)
T ss_dssp ------------------------TSC-CCCHHHHHHHCSEEEECCCCCSSSSSCCTTSBCHHHHHTSCT---TEEEEEC
T ss_pred ------------------------Ccc-cCCHHHHHHhCCEEEEeccCccccccchhhhcCHHHHhhCCC---CcEEEEC
Confidence 000 1467788889999999998643 33333 234445666 7888888
Q ss_pred eecCcc
Q 019978 197 AKGVEA 202 (333)
Q Consensus 197 ~kGi~~ 202 (333)
+.|-..
T Consensus 207 sRG~vv 212 (380)
T 2o4c_A 207 SRGAVV 212 (380)
T ss_dssp SCGGGB
T ss_pred CCCccc
Confidence 877443
No 193
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.75 E-value=0.00013 Score=68.42 Aligned_cols=80 Identities=16% Similarity=0.181 Sum_probs=54.3
Q ss_pred CceEEEECCCHHHHH-HHHHHHHhcCCCCCCeeEE-EEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 43 PLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 43 ~~kI~IIGaG~mG~a-lA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
++||+|||+|.||.. ++..+.+..+ .++. ++++++++++++.. . +
T Consensus 5 ~~~vgiiG~G~~g~~~~~~~l~~~~~-----~~lvav~d~~~~~~~~~~~--------~--------------~------ 51 (319)
T 1tlt_A 5 KLRIGVVGLGGIAQKAWLPVLAAASD-----WTLQGAWSPTRAKALPICE--------S--------------W------ 51 (319)
T ss_dssp CEEEEEECCSTHHHHTHHHHHHSCSS-----EEEEEEECSSCTTHHHHHH--------H--------------H------
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCC-----eEEEEEECCCHHHHHHHHH--------H--------------c------
Confidence 589999999999996 8888865413 6765 89999876543210 0 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHH
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEIS 181 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~ 181 (333)
.+.+.++.++...++|+|++++|+....+++....
T Consensus 52 --------------------------g~~~~~~~~~l~~~~D~V~i~tp~~~h~~~~~~al 86 (319)
T 1tlt_A 52 --------------------------RIPYADSLSSLAASCDAVFVHSSTASHFDVVSTLL 86 (319)
T ss_dssp --------------------------TCCBCSSHHHHHTTCSEEEECSCTTHHHHHHHHHH
T ss_pred --------------------------CCCccCcHHHhhcCCCEEEEeCCchhHHHHHHHHH
Confidence 11133555554467999999999887766666543
No 194
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.75 E-value=9.4e-05 Score=69.44 Aligned_cols=78 Identities=17% Similarity=0.113 Sum_probs=54.7
Q ss_pred ceEEEECCCHHHHHH-HHHHHHhcCCCCCCeeEE-EEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 44 LRIVGVGAGAWGSVF-TAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 44 ~kI~IIGaG~mG~al-A~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
+||+|||+|.||..+ +..|.+. + .++. ++++++++++++. +. +
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~-~-----~~~vav~d~~~~~~~~~~---------~~-------------~------- 45 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRAT-G-----GEVVSMMSTSAERGAAYA---------TE-------------N------- 45 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHT-T-----CEEEEEECSCHHHHHHHH---------HH-------------T-------
T ss_pred CeEEEEcccHHHHHhhhHHhhcC-C-----CeEEEEECCCHHHHHHHH---------HH-------------c-------
Confidence 589999999999998 7777665 6 6654 8899876543211 00 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCe-EEecCHHHHhc--CCCEEEEecCchhHHHHHHHHH
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPL-KVVTNLQEAVW--DADIVINGLPSTETKEVFEEIS 181 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i-~~t~d~~ea~~--~aDlIIlaVps~~~~~vl~~i~ 181 (333)
.+ .+.+|.++.+. ++|+|++++|+....+++....
T Consensus 46 -------------------------g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al 83 (332)
T 2glx_A 46 -------------------------GIGKSVTSVEELVGDPDVDAVYVSTTNELHREQTLAAI 83 (332)
T ss_dssp -------------------------TCSCCBSCHHHHHTCTTCCEEEECSCGGGHHHHHHHHH
T ss_pred -------------------------CCCcccCCHHHHhcCCCCCEEEEeCChhHhHHHHHHHH
Confidence 01 13467777775 5999999999988777776543
No 195
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.74 E-value=6.3e-05 Score=70.44 Aligned_cols=92 Identities=15% Similarity=0.276 Sum_probs=63.3
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCee-EEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~-V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
.++||+|||+|.||..++..|.+. + +.+ |.+++++++++++ +..
T Consensus 9 ~~~~igiIG~G~~g~~~~~~l~~~-~----~~~~v~v~d~~~~~~~~--------------------------~~~---- 53 (315)
T 3c1a_A 9 SPVRLALIGAGRWGKNYIRTIAGL-P----GAALVRLASSNPDNLAL--------------------------VPP---- 53 (315)
T ss_dssp CCEEEEEEECTTTTTTHHHHHHHC-T----TEEEEEEEESCHHHHTT--------------------------CCT----
T ss_pred CcceEEEECCcHHHHHHHHHHHhC-C----CcEEEEEEeCCHHHHHH--------------------------HHh----
Confidence 458999999999999999999875 3 166 4588988754321 000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeee
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~--~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~k 198 (333)
.+...++.++.++ ++|+|++++|+....+++.... .. ++.|+ +-|
T Consensus 54 --------------------------~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al---~~---Gk~v~-~eK 100 (315)
T 3c1a_A 54 --------------------------GCVIESDWRSVVSAPEVEAVIIATPPATHAEITLAAI---AS---GKAVL-VEK 100 (315)
T ss_dssp --------------------------TCEEESSTHHHHTCTTCCEEEEESCGGGHHHHHHHHH---HT---TCEEE-EES
T ss_pred --------------------------hCcccCCHHHHhhCCCCCEEEEeCChHHHHHHHHHHH---HC---CCcEE-EcC
Confidence 1334567777775 7999999999998877777643 33 44444 455
Q ss_pred cCc
Q 019978 199 GVE 201 (333)
Q Consensus 199 Gi~ 201 (333)
-+.
T Consensus 101 P~~ 103 (315)
T 3c1a_A 101 PLT 103 (315)
T ss_dssp SSC
T ss_pred CCc
Confidence 443
No 196
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=97.74 E-value=0.00015 Score=60.86 Aligned_cols=81 Identities=15% Similarity=0.124 Sum_probs=59.0
Q ss_pred HHHhhccCCCCCceEEEECC----CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHh
Q 019978 32 LRRLMGKAEGDPLRIVGVGA----GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRL 107 (333)
Q Consensus 32 ~~~~~~~~~~~~~kI~IIGa----G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~ 107 (333)
+++++. .+.+|+|||+ |.+|..++..|.+. | ++ +|..++.. ++
T Consensus 15 l~~ll~----~p~~iaVVGas~~~g~~G~~~~~~l~~~-G-----~~--v~~Vnp~~-~~-------------------- 61 (144)
T 2d59_A 15 IREILT----RYKKIALVGASPKPERDANIVMKYLLEH-G-----YD--VYPVNPKY-EE-------------------- 61 (144)
T ss_dssp HHHHHH----HCCEEEEETCCSCTTSHHHHHHHHHHHT-T-----CE--EEEECTTC-SE--------------------
T ss_pred HHHHHc----CCCEEEEEccCCCCCchHHHHHHHHHHC-C-----CE--EEEECCCC-Ce--------------------
Confidence 455553 2459999999 79999999999988 8 75 67777642 11
Q ss_pred hhcccccchhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHh
Q 019978 108 IRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISR 182 (333)
Q Consensus 108 ~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~ 182 (333)
+. .+.+..++++..+..|++++++|+....++++++..
T Consensus 62 ------i~-------------------------------G~~~y~sl~~l~~~vDlvvi~vp~~~~~~vv~~~~~ 99 (144)
T 2d59_A 62 ------VL-------------------------------GRKCYPSVLDIPDKIEVVDLFVKPKLTMEYVEQAIK 99 (144)
T ss_dssp ------ET-------------------------------TEECBSSGGGCSSCCSEEEECSCHHHHHHHHHHHHH
T ss_pred ------EC-------------------------------CeeccCCHHHcCCCCCEEEEEeCHHHHHHHHHHHHH
Confidence 10 233445555555679999999999999999988775
No 197
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.72 E-value=0.00019 Score=66.77 Aligned_cols=125 Identities=12% Similarity=0.106 Sum_probs=79.4
Q ss_pred CceEEEEC-CCHHHHHHHHHHHHhcCCCCCCeeEE-EEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 43 PLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 43 ~~kI~IIG-aG~mG~alA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
++||+|+| +|.||..++..+.+..+ +++. +++++..... + .....+.
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~-----~eLv~~~d~~~~~~~-------------G-----------~d~gel~-- 55 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPD-----ATLVGALDRTGSPQL-------------G-----------QDAGAFL-- 55 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTT-----EEEEEEBCCTTCTTT-------------T-----------SBTTTTT--
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCC-----CEEEEEEEecCcccc-------------c-----------ccHHHHh--
Confidence 58999999 79999999999887622 6654 4677643210 0 0000000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecC
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi 200 (333)
.+. ..+.+++|+++.+.++|+||-++++....+.++.... . +..+|+.+.|+
T Consensus 56 ----g~~------------------~gv~v~~dl~~ll~~~DVVIDfT~p~a~~~~~~~al~---~---G~~vVigTTG~ 107 (272)
T 4f3y_A 56 ----GKQ------------------TGVALTDDIERVCAEADYLIDFTLPEGTLVHLDAALR---H---DVKLVIGTTGF 107 (272)
T ss_dssp ----TCC------------------CSCBCBCCHHHHHHHCSEEEECSCHHHHHHHHHHHHH---H---TCEEEECCCCC
T ss_pred ----CCC------------------CCceecCCHHHHhcCCCEEEEcCCHHHHHHHHHHHHH---c---CCCEEEECCCC
Confidence 000 1455678999988899999999998877766665543 3 56677777787
Q ss_pred cccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHH
Q 019978 201 EAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASE 239 (333)
Q Consensus 201 ~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~e 239 (333)
..+. -+.|.+... ...++..||+..-
T Consensus 108 s~~~---------~~~L~~aa~----~~~vv~a~N~s~G 133 (272)
T 4f3y_A 108 SEPQ---------KAQLRAAGE----KIALVFSANMSVG 133 (272)
T ss_dssp CHHH---------HHHHHHHTT----TSEEEECSCCCHH
T ss_pred CHHH---------HHHHHHHhc----cCCEEEECCCCHH
Confidence 6531 123444332 1347889998753
No 198
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=97.68 E-value=0.00014 Score=72.72 Aligned_cols=81 Identities=20% Similarity=0.248 Sum_probs=49.9
Q ss_pred ceEEEECCCHHHHHH--HHHHHHhcCCCCC-CeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 44 LRIVGVGAGAWGSVF--TAMLQDSYGYLRD-KVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 44 ~kI~IIGaG~mG~al--A~~La~~~G~~~~-~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
|||+|||+|+.|.+. ...++.. ..+.. ..+|.|+|.++++++.... . +++. .+..
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~-~~l~~~~~ei~L~Di~~~rl~~~~~-----~-------~~~~------~~~~--- 58 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQT-DELSREDTHIYLMDVHERRLNASYI-----L-------ARKY------VEEL--- 58 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTC-TTTCSTTCEEEEECSCHHHHHHHHH-----H-------HHHH------HHHH---
T ss_pred CEEEEECCCchhhHHHHHHHHHhh-HhcCCCCCEEEEECCCHHHHHHHHH-----H-------HHHH------HHHc---
Confidence 799999999987653 3334433 22211 1479999999876543110 0 1110 0100
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEec
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL 168 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaV 168 (333)
..+ ..+..++|.++|+++||+||+++
T Consensus 59 ----~~~------------------~~i~~t~d~~eAl~gAD~Vi~~~ 84 (477)
T 3u95_A 59 ----NSP------------------VKVVKTESLDEAIEGADFIINTA 84 (477)
T ss_dssp ----TCC------------------CEEEEESCHHHHHTTCSEEEECC
T ss_pred ----CCC------------------eEEEEeCCHHHHhCCCCEEEECc
Confidence 000 25788999999999999999986
No 199
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=97.68 E-value=5.6e-05 Score=72.73 Aligned_cols=99 Identities=11% Similarity=0.119 Sum_probs=64.6
Q ss_pred CCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 41 ~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
.+.++|+|||+|.||.+++..|....+ ..+|.+|+|++++++++..+ +. ...+
T Consensus 127 ~~~~~v~iIGaG~~a~~~a~al~~~~~----~~~V~V~~r~~~~a~~la~~-----~~--------------~~~g---- 179 (350)
T 1x7d_A 127 PNARKMALIGNGAQSEFQALAFHKHLG----IEEIVAYDTDPLATAKLIAN-----LK--------------EYSG---- 179 (350)
T ss_dssp TTCCEEEEECCSTTHHHHHHHHHHHSC----CCEEEEECSSHHHHHHHHHH-----HT--------------TCTT----
T ss_pred ccCCeEEEECCcHHHHHHHHHHHHhCC----CcEEEEEcCCHHHHHHHHHH-----HH--------------hccC----
Confidence 456799999999999999988764312 16899999998776542110 00 0000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEe
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISL 196 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~ 196 (333)
..+...++++++++++|+|+.|||+.....++. ...+++ ++.|+.+
T Consensus 180 -------------------------~~~~~~~~~~eav~~aDiVi~aTps~~~~pvl~--~~~l~~---G~~V~~v 225 (350)
T 1x7d_A 180 -------------------------LTIRRASSVAEAVKGVDIITTVTADKAYATIIT--PDMLEP---GMHLNAV 225 (350)
T ss_dssp -------------------------CEEEECSSHHHHHTTCSEEEECCCCSSEEEEEC--GGGCCT---TCEEEEC
T ss_pred -------------------------ceEEEeCCHHHHHhcCCEEEEeccCCCCCceec--HHHcCC---CCEEEEC
Confidence 024556788899999999999999863222221 134555 6666554
No 200
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.67 E-value=4.7e-05 Score=75.82 Aligned_cols=92 Identities=22% Similarity=0.281 Sum_probs=63.6
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
+.|||.|+|+|.+|..+|..|... | |+|++++++++.++++..+ .. ...+.
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~-~-----~~v~vId~d~~~~~~~~~~-------------------~~-~~~i~--- 52 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGE-N-----NDITIVDKDGDRLRELQDK-------------------YD-LRVVN--- 52 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCST-T-----EEEEEEESCHHHHHHHHHH-------------------SS-CEEEE---
T ss_pred CcCEEEEECCCHHHHHHHHHHHHC-C-----CCEEEEECCHHHHHHHHHh-------------------cC-cEEEE---
Confidence 579999999999999999999988 7 9999999999876543210 00 11110
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHH-hcCCCEEEEecCchhHHHHHHHHHhhhhc
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEA-VWDADIVINGLPSTETKEVFEEISRYWKE 186 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea-~~~aDlIIlaVps~~~~~vl~~i~~~l~~ 186 (333)
++.. . .+-+++| +++||++|.++.++...-+.-.+++.+.+
T Consensus 53 Gd~~---------------------~---~~~L~~Agi~~ad~~ia~t~~De~Nl~~~~~Ak~~~~ 94 (461)
T 4g65_A 53 GHAS---------------------H---PDVLHEAGAQDADMLVAVTNTDETNMAACQVAFTLFN 94 (461)
T ss_dssp SCTT---------------------C---HHHHHHHTTTTCSEEEECCSCHHHHHHHHHHHHHHHC
T ss_pred EcCC---------------------C---HHHHHhcCCCcCCEEEEEcCChHHHHHHHHHHHHhcC
Confidence 1100 0 1123333 67999999999998877777777766543
No 201
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.66 E-value=6e-05 Score=70.84 Aligned_cols=39 Identities=15% Similarity=0.293 Sum_probs=30.2
Q ss_pred CceEEEECCCHHHH-HHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 43 PLRIVGVGAGAWGS-VFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 43 ~~kI~IIGaG~mG~-alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
++||+|||+|.||. .++..|.+..+ .+|.++++++++++
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~~~-----~~l~v~d~~~~~~~ 41 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQWPD-----IELVLCTRNPKVLG 41 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTSTT-----EEEEEECSCHHHHH
T ss_pred CcEEEEECCCHHHHHHHHHHHHhCCC-----ceEEEEeCCHHHHH
Confidence 37999999999998 58888865413 67778999886554
No 202
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.65 E-value=0.00019 Score=68.51 Aligned_cols=85 Identities=12% Similarity=0.079 Sum_probs=57.9
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeE-EEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
.++||+|||+|.||..++..|... . +.++ .++++++++++++. +. + .
T Consensus 5 ~~~~vgiiG~G~ig~~~~~~l~~~-~----~~~lv~v~d~~~~~~~~~a---------~~------------~-~----- 52 (362)
T 1ydw_A 5 TQIRIGVMGCADIARKVSRAIHLA-P----NATISGVASRSLEKAKAFA---------TA------------N-N----- 52 (362)
T ss_dssp -CEEEEEESCCTTHHHHHHHHHHC-T----TEEEEEEECSSHHHHHHHH---------HH------------T-T-----
T ss_pred CceEEEEECchHHHHHHHHHHhhC-C----CcEEEEEEcCCHHHHHHHH---------HH------------h-C-----
Confidence 468999999999999999988765 2 1555 57888876543211 00 0 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHH
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEIS 181 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~--~aDlIIlaVps~~~~~vl~~i~ 181 (333)
++ ....+.+|+++.+. +.|+|++|+|+....+++....
T Consensus 53 -----~~------------------~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al 92 (362)
T 1ydw_A 53 -----YP------------------ESTKIHGSYESLLEDPEIDALYVPLPTSLHVEWAIKAA 92 (362)
T ss_dssp -----CC------------------TTCEEESSHHHHHHCTTCCEEEECCCGGGHHHHHHHHH
T ss_pred -----CC------------------CCCeeeCCHHHHhcCCCCCEEEEcCChHHHHHHHHHHH
Confidence 00 02345678888775 5899999999998777776543
No 203
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.64 E-value=4.3e-05 Score=73.83 Aligned_cols=41 Identities=22% Similarity=0.367 Sum_probs=33.6
Q ss_pred CCCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhh
Q 019978 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (333)
Q Consensus 40 ~~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (333)
+.+.+||+|+|+|.||..++..|++. ++|++++|+++++++
T Consensus 13 ~~~~~~v~IiGaG~iG~~ia~~L~~~-------~~V~V~~R~~~~a~~ 53 (365)
T 2z2v_A 13 EGRHMKVLILGAGNIGRAIAWDLKDE-------FDVYIGDVNNENLEK 53 (365)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHTTT-------SEEEEEESCHHHHHH
T ss_pred cCCCCeEEEEcCCHHHHHHHHHHHcC-------CeEEEEECCHHHHHH
Confidence 34568999999999999999999876 689999999876543
No 204
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.64 E-value=0.00014 Score=68.52 Aligned_cols=82 Identities=18% Similarity=0.120 Sum_probs=56.2
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCee-EEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~-V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
++||+|||+|.||..++..+... +. .+.+ |-++++++++++++.. . +
T Consensus 2 ~~rigiiG~G~ig~~~~~~l~~~-~~--~~~~l~av~d~~~~~a~~~a~--------~-------------~-------- 49 (334)
T 3ohs_X 2 ALRWGIVSVGLISSDFTAVLQTL-PR--SEHQVVAVAARDLSRAKEFAQ--------K-------------H-------- 49 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTS-CT--TTEEEEEEECSSHHHHHHHHH--------H-------------H--------
T ss_pred ccEEEEECchHHHHHHHHHHHhC-CC--CCeEEEEEEcCCHHHHHHHHH--------H-------------c--------
Confidence 37999999999999999988654 20 0134 4578888765443110 0 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCe-EEecCHHHHhc--CCCEEEEecCchhHHHHHHHHH
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPL-KVVTNLQEAVW--DADIVINGLPSTETKEVFEEIS 181 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i-~~t~d~~ea~~--~aDlIIlaVps~~~~~vl~~i~ 181 (333)
.+ .+.+|.++.+. +.|+|++|+|.....+++....
T Consensus 50 -------------------------~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al 87 (334)
T 3ohs_X 50 -------------------------DIPKAYGSYEELAKDPNVEVAYVGTQHPQHKAAVMLCL 87 (334)
T ss_dssp -------------------------TCSCEESSHHHHHHCTTCCEEEECCCGGGHHHHHHHHH
T ss_pred -------------------------CCCcccCCHHHHhcCCCCCEEEECCCcHHHHHHHHHHH
Confidence 11 24578888776 6899999999998777766554
No 205
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.64 E-value=0.00047 Score=64.67 Aligned_cols=128 Identities=13% Similarity=0.123 Sum_probs=79.2
Q ss_pred CCceEEEEC-CCHHHHHHHHHHHHhcCCCCCCeeEE-EEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhh
Q 019978 42 DPLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (333)
Q Consensus 42 ~~~kI~IIG-aG~mG~alA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (333)
.++||+|+| +|.||..++..+.+..+ .++. ++++++.... +. ....+.++
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~-----~eLvg~vd~~~~~~~-------------G~--------d~gel~G~-- 71 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRRKD-----VELCAVLVRKGSSFV-------------DK--------DASILIGS-- 71 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTCSS-----EEEEEEBCCTTCTTT-------------TS--------BGGGGTTC--
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCC-----CEEEEEEecCCcccc-------------cc--------chHHhhcc--
Confidence 568999999 89999999999876512 5543 5566542110 00 00001000
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeec
Q 019978 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kG 199 (333)
....+.+++|+++.+.++|+||-++++....+.++... .. +..+|+.+.|
T Consensus 72 ------------------------~~~gv~v~~dl~~ll~~aDVvIDFT~p~a~~~~~~~~l---~~---Gv~vViGTTG 121 (288)
T 3ijp_A 72 ------------------------DFLGVRITDDPESAFSNTEGILDFSQPQASVLYANYAA---QK---SLIHIIGTTG 121 (288)
T ss_dssp ------------------------SCCSCBCBSCHHHHTTSCSEEEECSCHHHHHHHHHHHH---HH---TCEEEECCCC
T ss_pred ------------------------CcCCceeeCCHHHHhcCCCEEEEcCCHHHHHHHHHHHH---Hc---CCCEEEECCC
Confidence 00246678999998899999999988776665555544 33 5677777778
Q ss_pred CcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHH
Q 019978 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEI 240 (333)
Q Consensus 200 i~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev 240 (333)
+..+. -+.|.+... ...++..||+..-+
T Consensus 122 ~~~e~---------~~~L~~aa~----~~~~~~a~N~SiGv 149 (288)
T 3ijp_A 122 FSKTE---------EAQIADFAK----YTTIVKSGNMSLGV 149 (288)
T ss_dssp CCHHH---------HHHHHHHHT----TSEEEECSCCCHHH
T ss_pred CCHHH---------HHHHHHHhC----cCCEEEECCCcHHH
Confidence 76531 123455442 14578899997543
No 206
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=97.64 E-value=9.5e-05 Score=61.86 Aligned_cols=86 Identities=19% Similarity=0.144 Sum_probs=61.9
Q ss_pred hHHHHhhccCCCCCceEEEECC----CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHH
Q 019978 30 DELRRLMGKAEGDPLRIVGVGA----GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLR 105 (333)
Q Consensus 30 ~~~~~~~~~~~~~~~kI~IIGa----G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~ 105 (333)
+++++++. ++.+|+|||+ |.+|..++..|.+. | ++ +|.+++.+..+
T Consensus 4 ~~l~~ll~----~p~~vaVvGas~~~g~~G~~~~~~l~~~-G-----~~--v~~vnp~~~~~------------------ 53 (140)
T 1iuk_A 4 QELRAYLS----QAKTIAVLGAHKDPSRPAHYVPRYLREQ-G-----YR--VLPVNPRFQGE------------------ 53 (140)
T ss_dssp HHHHHHHH----HCCEEEEETCCSSTTSHHHHHHHHHHHT-T-----CE--EEEECGGGTTS------------------
T ss_pred HHHHHHHc----CCCEEEEECCCCCCCChHHHHHHHHHHC-C-----CE--EEEeCCCcccC------------------
Confidence 34556662 3569999999 89999999999988 8 75 78777753110
Q ss_pred HhhhcccccchhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhh
Q 019978 106 RLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRY 183 (333)
Q Consensus 106 ~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~ 183 (333)
.+. .+.+..++.+.-+..|++++++|+....++++++...
T Consensus 54 -------~i~-------------------------------G~~~~~sl~el~~~vDlavi~vp~~~~~~v~~~~~~~ 93 (140)
T 1iuk_A 54 -------ELF-------------------------------GEEAVASLLDLKEPVDILDVFRPPSALMDHLPEVLAL 93 (140)
T ss_dssp -------EET-------------------------------TEECBSSGGGCCSCCSEEEECSCHHHHTTTHHHHHHH
T ss_pred -------cCC-------------------------------CEEecCCHHHCCCCCCEEEEEeCHHHHHHHHHHHHHc
Confidence 011 2334455656556799999999999999999887753
No 207
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=97.62 E-value=0.00021 Score=67.92 Aligned_cols=110 Identities=14% Similarity=0.179 Sum_probs=68.6
Q ss_pred CCceEEEECC-CHHHHHHHHHHHHhcCCCC--CCeeEEEEecC----CcchhhhhhhhHHHHHhhhhhHHHHhhhccccc
Q 019978 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLR--DKVLIRIWRRP----GRSVDRATAEHLFEVINSREDVLRRLIRRCAYL 114 (333)
Q Consensus 42 ~~~kI~IIGa-G~mG~alA~~La~~~G~~~--~~~~V~l~~r~----~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l 114 (333)
.+|||+|+|+ |.+|+.++..|+.. |.+. .-.+|.+++++ +++++. . ..+ +. +. ..
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~-~~~~~~~~~ev~l~Di~~~~~~~~~~g-----~--~~d-----l~---~~--~~ 65 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANG-DMLGKDQPVILQLLEIPNEKAQKALQG-----V--MME-----ID---DC--AF 65 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTT-TTTCTTCCEEEEEECCSCHHHHHHHHH-----H--HHH-----HH---TT--TC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhC-CCcCCCCCCEEEEEcCCCccccccchh-----h--HHH-----Hh---hh--cc
Confidence 4589999998 99999999999887 6321 00379999998 432211 0 000 00 00 00
Q ss_pred chhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecC--c--------------hhHHHHHH
Q 019978 115 KYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLP--S--------------TETKEVFE 178 (333)
Q Consensus 115 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVp--s--------------~~~~~vl~ 178 (333)
+ + ...+..+++..+++++||+||++.. . ..+.++++
T Consensus 66 ~----------~------------------~~~i~~~~~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~ 117 (329)
T 1b8p_A 66 P----------L------------------LAGMTAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGK 117 (329)
T ss_dssp T----------T------------------EEEEEEESSHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred c----------c------------------cCcEEEecCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 0 0 0146677898999999999998652 1 12556666
Q ss_pred HHHhhhhccCCCCEEEEeeecC
Q 019978 179 EISRYWKERITVPVIISLAKGV 200 (333)
Q Consensus 179 ~i~~~l~~~~~~~~Ivs~~kGi 200 (333)
.+.++.++ +..++.++|-+
T Consensus 118 ~i~~~~~p---~a~ii~~SNPv 136 (329)
T 1b8p_A 118 AIDAVASR---NIKVLVVGNPA 136 (329)
T ss_dssp HHHHHSCT---TCEEEECSSSH
T ss_pred HHHHhcCC---CeEEEEccCch
Confidence 66665423 56777777643
No 208
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=97.61 E-value=0.0002 Score=70.78 Aligned_cols=173 Identities=20% Similarity=0.182 Sum_probs=103.7
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
++|+|||.|+-|.+=|..|.++ | .+|++--|.....+. +. ......
T Consensus 38 K~IaVIGyGsQG~AqAlNLRDS-G-----v~V~Vglr~~s~~e~------------~~-----------S~~~A~----- 83 (491)
T 3ulk_A 38 KKVVIVGCGAQGLNQGLNMRDS-G-----LDISYALRKEAIAEK------------RA-----------SWRKAT----- 83 (491)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT-T-----CEEEEEECHHHHHTT------------CH-----------HHHHHH-----
T ss_pred CEEEEeCCChHhHHHHhHHHhc-C-----CcEEEEeCCCCcccc------------cc-----------hHHHHH-----
Confidence 7999999999999999999999 8 899887764321100 00 000000
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCccc
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEAE 203 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~~~ 203 (333)
.+| +++. +.+|+++.||+|++-+|.....+++++|.|.+++ ++.+ .++-|+...
T Consensus 84 ---------~~G------------f~v~-~~~eA~~~ADvV~~L~PD~~q~~vy~~I~p~lk~---G~~L-~faHGFnI~ 137 (491)
T 3ulk_A 84 ---------ENG------------FKVG-TYEELIPQADLVINLTPDKQHSDVVRTVQPLMKD---GAAL-GYSHGFNIV 137 (491)
T ss_dssp ---------HTT------------CEEE-EHHHHGGGCSEEEECSCGGGHHHHHHHHGGGSCT---TCEE-EESSCHHHH
T ss_pred ---------HCC------------CEec-CHHHHHHhCCEEEEeCChhhHHHHHHHHHhhCCC---CCEE-EecCccccc
Confidence 122 3332 4778999999999999999999999999999997 5544 467676542
Q ss_pred ccCCccCCCHHHHHHhHhCCCCCcEEEE--cCCCchH--HHh--ccCceeEEEe--CC-----hhhHHHHHHHhCC--CC
Q 019978 204 LEAVPRIITPTQMINRATGVPIENILYL--GGPNIAS--EIY--NKEYANARIC--GA-----EKWRKPLAKFLRR--PH 268 (333)
Q Consensus 204 ~~~~~~~~~~se~i~~~lg~~~~~~~vl--~GP~~a~--ev~--~~~~~~~~~~--~~-----~~~~~~l~~ll~~--~~ 268 (333)
. ....+.....+..+ -||.+.. +-. .|.|+.+.+- .| .+.+..+..-.-. .|
T Consensus 138 ~-------------~~i~pp~dvdVimVAPKgpG~~VR~~y~~G~GvP~liAVhqeqD~sG~a~~~AlayA~aiG~~raG 204 (491)
T 3ulk_A 138 E-------------VGEQIRKDITVVMVAPKCPGTEVREEYKRGFGVPTLIAVHPENDPKGEGMAIAKAWAAATGGHRAG 204 (491)
T ss_dssp T-------------TCCCCCTTSEEEEEEESSCHHHHHHHHHTTCCCCEEEEECGGGCTTSCHHHHHHHHHHHHTGGGTC
T ss_pred c-------------cccccCCCcceEEeCCCCCcHHHHHHHHcCCCCceEEEEEeCCCCchhHHHHHHHHHHhcCCCcCc
Confidence 1 11111112223222 4777643 222 3557765442 22 1334444444443 23
Q ss_pred -----eEEEecCChhHHH--HHHHHHHH
Q 019978 269 -----FTVWDNGDLVTHE--VMGGLKNV 289 (333)
Q Consensus 269 -----~~v~~s~Di~gve--~~~alkNv 289 (333)
|+-.+.+|+.|-+ +||.+.-.
T Consensus 205 vieTTF~eEtetDLfGEQaVLcGgl~~l 232 (491)
T 3ulk_A 205 VLESSFVAEVKSDLMGEQTILCGMLQAG 232 (491)
T ss_dssp EEECCHHHHHHHHHHHHHTTTTHHHHHH
T ss_pred eeeccHHHHHHHHHHhhHHHHHHHHHHH
Confidence 2333568888876 67754443
No 209
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.60 E-value=5.2e-05 Score=69.76 Aligned_cols=36 Identities=28% Similarity=0.256 Sum_probs=32.7
Q ss_pred eEEEECCCHHHHHHHHHHHHhcCCCCCCe-eEEEEecCCcchh
Q 019978 45 RIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVD 86 (333)
Q Consensus 45 kI~IIGaG~mG~alA~~La~~~G~~~~~~-~V~l~~r~~~~~~ 86 (333)
+|+|||+|.||.+++..|.+. | . +|++++|++++++
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~-G-----~~~I~v~nR~~~ka~ 146 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQM-G-----VKDIWVVNRTIERAK 146 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-T-----CCCEEEEESCHHHHH
T ss_pred eEEEECcHHHHHHHHHHHHHc-C-----CCEEEEEeCCHHHHH
Confidence 899999999999999999998 8 6 8999999987554
No 210
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.60 E-value=0.00033 Score=66.26 Aligned_cols=83 Identities=16% Similarity=0.139 Sum_probs=56.0
Q ss_pred CCceEEEECCCHHHHH-HHHHHHHhcCCCCCCeeEE-EEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhh
Q 019978 42 DPLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~a-lA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (333)
.|+||+|||+|.||.. ++..+... . +.+|. ++++++++++++.+ + | .
T Consensus 22 ~mirigiIG~G~ig~~~~~~~~~~~-~----~~~lvav~d~~~~~a~~~a~--------~-------------~-g---- 70 (350)
T 4had_A 22 SMLRFGIISTAKIGRDNVVPAIQDA-E----NCVVTAIASRDLTRAREMAD--------R-------------F-S---- 70 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHC-S----SEEEEEEECSSHHHHHHHHH--------H-------------H-T----
T ss_pred CccEEEEEcChHHHHHHHHHHHHhC-C----CeEEEEEECCCHHHHHHHHH--------H-------------c-C----
Confidence 4689999999999975 45566554 2 25655 78888876543210 0 0 0
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHh
Q 019978 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISR 182 (333)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~--~aDlIIlaVps~~~~~vl~~i~~ 182 (333)
-.++.+|.++.+. +.|+|++|+|+....+++.....
T Consensus 71 ---------------------------~~~~y~d~~ell~~~~iDaV~I~tP~~~H~~~~~~al~ 108 (350)
T 4had_A 71 ---------------------------VPHAFGSYEEMLASDVIDAVYIPLPTSQHIEWSIKAAD 108 (350)
T ss_dssp ---------------------------CSEEESSHHHHHHCSSCSEEEECSCGGGHHHHHHHHHH
T ss_pred ---------------------------CCeeeCCHHHHhcCCCCCEEEEeCCCchhHHHHHHHHh
Confidence 0135678888775 57999999999877777666543
No 211
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.57 E-value=0.00014 Score=71.37 Aligned_cols=101 Identities=21% Similarity=0.288 Sum_probs=66.2
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
..++|.|+|+|.+|..++..|... | ++|++++++++.++.++..+ ...+.
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~-g-----~~vvvId~d~~~v~~~~~~g------------------~~vi~------ 52 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSS-G-----VKMVVLDHDPDHIETLRKFG------------------MKVFY------ 52 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECCHHHHHHHHHTT------------------CCCEE------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC-C-----CCEEEEECCHHHHHHHHhCC------------------CeEEE------
Confidence 447899999999999999999998 8 99999999998765432111 00010
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHH-hcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeec
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEA-VWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea-~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kG 199 (333)
++.. . ...++++ +++||+||++++.......+-...+.+.+ +..||.-++.
T Consensus 53 GDat---------------------~---~~~L~~agi~~A~~viv~~~~~~~n~~i~~~ar~~~p---~~~Iiara~~ 104 (413)
T 3l9w_A 53 GDAT---------------------R---MDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFP---HLQIIARARD 104 (413)
T ss_dssp SCTT---------------------C---HHHHHHTTTTTCSEEEECCSSHHHHHHHHHHHHHHCT---TCEEEEEESS
T ss_pred cCCC---------------------C---HHHHHhcCCCccCEEEECCCChHHHHHHHHHHHHhCC---CCeEEEEECC
Confidence 1100 0 0113333 67899999999998766665555555555 4456655543
No 212
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=97.56 E-value=0.00024 Score=67.51 Aligned_cols=39 Identities=10% Similarity=0.284 Sum_probs=31.4
Q ss_pred CCCceEEEEC-CCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 41 GDPLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 41 ~~~~kI~IIG-aG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
..+|||+|+| +|.+|.+++..|+.. |. .++|.+++++++
T Consensus 6 ~~~mKI~ViGAaG~VG~~la~~L~~~-g~---~~ev~l~Di~~~ 45 (326)
T 1smk_A 6 APGFKVAILGAAGGIGQPLAMLMKMN-PL---VSVLHLYDVVNA 45 (326)
T ss_dssp --CEEEEEETTTSTTHHHHHHHHHHC-TT---EEEEEEEESSSH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHhC-CC---CCEEEEEeCCCc
Confidence 3568999999 799999999999887 52 158999998875
No 213
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=97.55 E-value=0.00026 Score=67.71 Aligned_cols=82 Identities=16% Similarity=0.102 Sum_probs=57.4
Q ss_pred CceEEEECCCHHHHH-HHHHHHHhcCCCCCCeeEE-EEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 43 PLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 43 ~~kI~IIGaG~mG~a-lA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
++||+|||+|.||.. ++..|.+. . +.+|. ++++++++++++.. .+.
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~~-~----~~~l~av~d~~~~~~~~~a~----------------------~~~----- 52 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQM-Q----DIRIVAACDSDLERARRVHR----------------------FIS----- 52 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTC-T----TEEEEEEECSSHHHHGGGGG----------------------TSC-----
T ss_pred cceEEEECCCHHHHHHHHHHHHhC-C----CcEEEEEEcCCHHHHHHHHH----------------------hcC-----
Confidence 479999999999985 88888764 2 26765 88998875543110 000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcC--CCEEEEecCchhHHHHHHHHHh
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD--ADIVINGLPSTETKEVFEEISR 182 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~--aDlIIlaVps~~~~~vl~~i~~ 182 (333)
...+.+|+++.+.+ .|+|++|+|+....+++.....
T Consensus 53 --------------------------~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~ 90 (359)
T 3m2t_A 53 --------------------------DIPVLDNVPAMLNQVPLDAVVMAGPPQLHFEMGLLAMS 90 (359)
T ss_dssp --------------------------SCCEESSHHHHHHHSCCSEEEECSCHHHHHHHHHHHHH
T ss_pred --------------------------CCcccCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHH
Confidence 23456788888764 5999999999887777765543
No 214
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=97.55 E-value=0.0001 Score=69.85 Aligned_cols=94 Identities=19% Similarity=0.198 Sum_probs=62.4
Q ss_pred CCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 41 ~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
.+.++|+|||+|.||...+..|....+ ..+|.+|+|+ +++++. +.+... + +
T Consensus 119 ~~~~~v~iIGaG~~a~~~~~al~~~~~----~~~V~v~~r~--~a~~la-----~~l~~~-------------~-g---- 169 (313)
T 3hdj_A 119 PRSSVLGLFGAGTQGAEHAAQLSARFA----LEAILVHDPY--ASPEIL-----ERIGRR-------------C-G---- 169 (313)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHSC----CCEEEEECTT--CCHHHH-----HHHHHH-------------H-T----
T ss_pred CCCcEEEEECccHHHHHHHHHHHHhCC----CcEEEEECCc--HHHHHH-----HHHHHh-------------c-C----
Confidence 456899999999999999999987412 1689999999 443321 111100 0 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEe
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISL 196 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~ 196 (333)
..+.+. ++++++.++|+|+.|||+.. .++. ..++++ +++|+.+
T Consensus 170 -------------------------~~~~~~-~~~eav~~aDIVi~aT~s~~--pvl~--~~~l~~---G~~V~~v 212 (313)
T 3hdj_A 170 -------------------------VPARMA-APADIAAQADIVVTATRSTT--PLFA--GQALRA---GAFVGAI 212 (313)
T ss_dssp -------------------------SCEEEC-CHHHHHHHCSEEEECCCCSS--CSSC--GGGCCT---TCEEEEC
T ss_pred -------------------------CeEEEe-CHHHHHhhCCEEEEccCCCC--cccC--HHHcCC---CcEEEEC
Confidence 034455 89999999999999999852 2222 245565 6666554
No 215
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=97.52 E-value=0.00023 Score=63.87 Aligned_cols=99 Identities=15% Similarity=0.258 Sum_probs=68.1
Q ss_pred chHHhhhHHHHhhccCCCCCceEEEECCCHHHHHHHHHHH--HhcCCCCCCeeE-EEEecCCc-chhhhhhhhHHHHHhh
Q 019978 24 SLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQ--DSYGYLRDKVLI-RIWRRPGR-SVDRATAEHLFEVINS 99 (333)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~alA~~La--~~~G~~~~~~~V-~l~~r~~~-~~~~~~~~~l~~~i~~ 99 (333)
+.++=+++++..+|... ..+|+|+|+|++|.+++..+. .. | +++ -++|.+++ +..+
T Consensus 67 ~V~~L~~~i~~~Lg~~~--~~~V~IvGaG~lG~aLa~~~~~~~~-g-----~~iVg~~D~dp~~kiG~------------ 126 (212)
T 3keo_A 67 DVKKLMNFFAEILNDHS--TTNVMLVGCGNIGRALLHYRFHDRN-K-----MQISMAFDLDSNDLVGK------------ 126 (212)
T ss_dssp EHHHHHHHHHHHTTTTS--CEEEEEECCSHHHHHHTTCCCCTTS-S-----EEEEEEEECTTSTTTTC------------
T ss_pred EHHHHHHHHHHHhCCCC--CCEEEEECcCHHHHHHHHhhhcccC-C-----eEEEEEEeCCchhccCc------------
Confidence 56666777888887554 359999999999999998842 22 3 664 46788876 4310
Q ss_pred hhhHHHHhhhcccccchhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHH
Q 019978 100 REDVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVF 177 (333)
Q Consensus 100 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~--~aDlIIlaVps~~~~~vl 177 (333)
....++ ++...+++++.++ +.|.+|+|+|+...++++
T Consensus 127 ------------~~i~Gv-----------------------------pV~~~~dL~~~v~~~~Id~vIIAvPs~~aq~v~ 165 (212)
T 3keo_A 127 ------------TTEDGI-----------------------------PVYGISTINDHLIDSDIETAILTVPSTEAQEVA 165 (212)
T ss_dssp ------------BCTTCC-----------------------------BEEEGGGHHHHC-CCSCCEEEECSCGGGHHHHH
T ss_pred ------------eeECCe-----------------------------EEeCHHHHHHHHHHcCCCEEEEecCchhHHHHH
Confidence 011111 2444577777665 589999999999888888
Q ss_pred HHHHhh
Q 019978 178 EEISRY 183 (333)
Q Consensus 178 ~~i~~~ 183 (333)
+.+...
T Consensus 166 d~lv~~ 171 (212)
T 3keo_A 166 DILVKA 171 (212)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 887753
No 216
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.50 E-value=0.00018 Score=67.53 Aligned_cols=66 Identities=21% Similarity=0.160 Sum_probs=48.9
Q ss_pred cccccccccchHHhhhHHHHhhccCCCCCceEEEECCCHHHHHHHHHHHHhcCCCCCCe-eEEEEecCCcchhh
Q 019978 15 NGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDR 87 (333)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~-~V~l~~r~~~~~~~ 87 (333)
+|-+..+|-...--+.++++.-+. .-..++|+|+|+|.+|.+++..|++. | . +|++|+|+++++++
T Consensus 114 ~g~l~g~nTd~~G~~~~l~~~~~~-~l~~~~vlVlGaGg~g~aia~~L~~~-G-----~~~V~v~nR~~~ka~~ 180 (297)
T 2egg_A 114 DGRLVGYNTDGLGYVQALEEEMNI-TLDGKRILVIGAGGGARGIYFSLLST-A-----AERIDMANRTVEKAER 180 (297)
T ss_dssp TTEEEEECCHHHHHHHHHHHHTTC-CCTTCEEEEECCSHHHHHHHHHHHTT-T-----CSEEEEECSSHHHHHH
T ss_pred CCeEeeccCCHHHHHHHHHHhCCC-CCCCCEEEEECcHHHHHHHHHHHHHC-C-----CCEEEEEeCCHHHHHH
Confidence 455556676666666677653212 12347999999999999999999998 8 6 89999999876543
No 217
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.49 E-value=0.00019 Score=67.98 Aligned_cols=43 Identities=7% Similarity=0.096 Sum_probs=34.8
Q ss_pred CCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhh
Q 019978 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (333)
Q Consensus 41 ~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (333)
.+.++|+|||+|.+|..++..|....+ ..+|.+|+|+++++++
T Consensus 123 ~~~~~v~iIGaG~~a~~~~~al~~~~~----~~~V~v~~r~~~~a~~ 165 (322)
T 1omo_A 123 KNSSVFGFIGCGTQAYFQLEALRRVFD----IGEVKAYDVREKAAKK 165 (322)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHSC----CCEEEEECSSHHHHHH
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHhCC----ccEEEEECCCHHHHHH
Confidence 456799999999999999999987412 1689999999887654
No 218
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=97.49 E-value=0.00038 Score=66.84 Aligned_cols=129 Identities=19% Similarity=0.187 Sum_probs=70.0
Q ss_pred ccccchHHhhhHHHHhhccCCCCCceEEEECC-CHHHHHHHHHHHHhcCCCCCC--eeEEEEecCCcchhhhhhhhHHHH
Q 019978 20 HTNGSLEERLDELRRLMGKAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDK--VLIRIWRRPGRSVDRATAEHLFEV 96 (333)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGa-G~mG~alA~~La~~~G~~~~~--~~V~l~~r~~~~~~~~~~~~l~~~ 96 (333)
|-=|+++.|-..+ .+....||+|+|| |.+|.+++..|+.. ..+..+ .++.|+|.++.. +.+ +++.
T Consensus 7 ~~~~~~~~~~~~~------~s~~~vKVaViGAaG~IG~~la~~la~~-~l~~~~~~~eL~L~Di~~~~-~~~--~Gva-- 74 (345)
T 4h7p_A 7 HHMGTLEAQTQGP------GSMSAVKVAVTGAAGQIGYALVPLIARG-ALLGPTTPVELRLLDIEPAL-KAL--AGVE-- 74 (345)
T ss_dssp ---------------------CCCEEEEEESTTSHHHHHHHHHHHHT-TTTCTTCCEEEEEECCGGGH-HHH--HHHH--
T ss_pred cccccccccccCC------CCCCCCEEEEECcCcHHHHHHHHHHHhc-cccCCCCccEEEEECCCCcc-ccc--hhhh--
Confidence 3346666653332 2223469999997 99999999999886 432211 278999997642 111 1110
Q ss_pred HhhhhhHHHHhhhcccccchhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEec--Cch---
Q 019978 97 INSREDVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL--PST--- 171 (333)
Q Consensus 97 i~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaV--ps~--- 171 (333)
++ |+ ++ ..+ + ...+..+++..+++++||+||++- |..
T Consensus 75 ~D-----L~----~~-~~~----------~------------------~~~~~~~~~~~~a~~~advVvi~aG~prkpGm 116 (345)
T 4h7p_A 75 AE-----LE----DC-AFP----------L------------------LDKVVVTADPRVAFDGVAIAIMCGAFPRKAGM 116 (345)
T ss_dssp HH-----HH----HT-TCT----------T------------------EEEEEEESCHHHHTTTCSEEEECCCCCCCTTC
T ss_pred hh-----hh----hc-Ccc----------C------------------CCcEEEcCChHHHhCCCCEEEECCCCCCCCCC
Confidence 11 00 00 011 0 014677889999999999999953 321
Q ss_pred -----------hHHHHHHHHHhhhhccCCCCEEEEeeecCc
Q 019978 172 -----------ETKEVFEEISRYWKERITVPVIISLAKGVE 201 (333)
Q Consensus 172 -----------~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~ 201 (333)
.++++.+.|.++..+ +..|+.++|-+.
T Consensus 117 tR~DLl~~Na~I~~~~~~~i~~~a~~---~~~vlvvsNPvd 154 (345)
T 4h7p_A 117 ERKDLLEMNARIFKEQGEAIAAVAAS---DCRVVVVGNPAN 154 (345)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSCT---TCEEEECSSSHH
T ss_pred CHHHHHHHhHHHHHHHHHHHHhhccC---ceEEEEeCCCcc
Confidence 355666666666544 677777776544
No 219
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=97.49 E-value=0.00036 Score=66.69 Aligned_cols=80 Identities=18% Similarity=0.245 Sum_probs=56.4
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEE-EEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
++||+|||+|.||...+..+.+. . +.+|. ++++++++++.. ..
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~-~----~~~l~av~d~~~~~~~~a---------~~---------------------- 48 (359)
T 3e18_A 5 KYQLVIVGYGGMGSYHVTLASAA-D----NLEVHGVFDILAEKREAA---------AQ---------------------- 48 (359)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTS-T----TEEEEEEECSSHHHHHHH---------HT----------------------
T ss_pred cCcEEEECcCHHHHHHHHHHHhC-C----CcEEEEEEcCCHHHHHHH---------Hh----------------------
Confidence 47999999999999999988765 2 26654 678887543210 00
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHh
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISR 182 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~--~aDlIIlaVps~~~~~vl~~i~~ 182 (333)
..+.+.+|+++.+. +.|+|++|+|+....+++.....
T Consensus 49 ------------------------~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~ 87 (359)
T 3e18_A 49 ------------------------KGLKIYESYEAVLADEKVDAVLIATPNDSHKELAISALE 87 (359)
T ss_dssp ------------------------TTCCBCSCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHH
T ss_pred ------------------------cCCceeCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHH
Confidence 02334578888776 78999999999887777665543
No 220
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=97.48 E-value=0.00053 Score=64.95 Aligned_cols=86 Identities=17% Similarity=0.104 Sum_probs=58.1
Q ss_pred CCCCCceEEEECCC-HHHHHHHHHHHHhcCCCCCCeeE-EEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccch
Q 019978 39 AEGDPLRIVGVGAG-AWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKY 116 (333)
Q Consensus 39 ~~~~~~kI~IIGaG-~mG~alA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~ 116 (333)
...+++||+|||+| .+|...+..+... + ++.++ -++++++++++++. +. +.
T Consensus 14 ~~~~~irvgiIG~G~~~g~~~~~~l~~~-~---~~~~lvav~d~~~~~~~~~a---------~~-------------~~- 66 (340)
T 1zh8_A 14 KPLRKIRLGIVGCGIAARELHLPALKNL-S---HLFEITAVTSRTRSHAEEFA---------KM-------------VG- 66 (340)
T ss_dssp --CCCEEEEEECCSHHHHHTHHHHHHTT-T---TTEEEEEEECSSHHHHHHHH---------HH-------------HS-
T ss_pred CCCCceeEEEEecCHHHHHHHHHHHHhC-C---CceEEEEEEcCCHHHHHHHH---------HH-------------hC-
Confidence 34456899999999 8999999888764 2 11555 57888876543211 00 00
Q ss_pred hhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHH
Q 019978 117 VEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEIS 181 (333)
Q Consensus 117 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~--~aDlIIlaVps~~~~~vl~~i~ 181 (333)
...+.+|.++.+. +.|+|++|+|+....+++....
T Consensus 67 ------------------------------~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al 103 (340)
T 1zh8_A 67 ------------------------------NPAVFDSYEELLESGLVDAVDLTLPVELNLPFIEKAL 103 (340)
T ss_dssp ------------------------------SCEEESCHHHHHHSSCCSEEEECCCGGGHHHHHHHHH
T ss_pred ------------------------------CCcccCCHHHHhcCCCCCEEEEeCCchHHHHHHHHHH
Confidence 1245678888775 5899999999987777766544
No 221
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.46 E-value=0.00032 Score=67.69 Aligned_cols=81 Identities=19% Similarity=0.161 Sum_probs=56.8
Q ss_pred CceEEEECCC-HHHHHHHHHHHHhcCCCCCCeeEE-EEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 43 PLRIVGVGAG-AWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 43 ~~kI~IIGaG-~mG~alA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
++||+|||+| .||..++..+... . +.++. ++++++++++++. +. +
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~-~----~~~l~av~d~~~~~~~~~a---------~~------------~------- 48 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHH-P----DAQIVAACDPNEDVRERFG---------KE------------Y------- 48 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHC-T----TEEEEEEECSCHHHHHHHH---------HH------------H-------
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhC-C----CeEEEEEEeCCHHHHHHHH---------HH------------c-------
Confidence 4799999999 9999999998775 3 15554 7888876543211 00 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHh
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISR 182 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~--~aDlIIlaVps~~~~~vl~~i~~ 182 (333)
.+...+|.++.+. +.|+|++++|+....+++.....
T Consensus 49 --------------------------g~~~~~~~~ell~~~~vD~V~i~tp~~~H~~~~~~al~ 86 (387)
T 3moi_A 49 --------------------------GIPVFATLAEMMQHVQMDAVYIASPHQFHCEHVVQASE 86 (387)
T ss_dssp --------------------------TCCEESSHHHHHHHSCCSEEEECSCGGGHHHHHHHHHH
T ss_pred --------------------------CCCeECCHHHHHcCCCCCEEEEcCCcHHHHHHHHHHHH
Confidence 2335578888776 48999999999877776665443
No 222
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=97.45 E-value=0.00059 Score=64.28 Aligned_cols=80 Identities=10% Similarity=0.177 Sum_probs=56.0
Q ss_pred CceEEEECCCHHHH-HHHHHHHHhcCCCCCCeeE-EEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 43 PLRIVGVGAGAWGS-VFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 43 ~~kI~IIGaG~mG~-alA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
++||+|||+|.+|. .++..+... + .+| -++++++++++++.. .++
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~~-~-----~~lvav~d~~~~~~~~~a~----------------------~~~----- 50 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLIDA-G-----AELAGVFESDSDNRAKFTS----------------------LFP----- 50 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHHT-T-----CEEEEEECSCTTSCHHHHH----------------------HST-----
T ss_pred ccEEEEECCChHHHHHhhhhhcCC-C-----cEEEEEeCCCHHHHHHHHH----------------------hcC-----
Confidence 57999999999996 577777554 5 674 689999877643210 010
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHH
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEIS 181 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~--~aDlIIlaVps~~~~~vl~~i~ 181 (333)
...+.+|.++.+. +.|+|++|+|.....+++....
T Consensus 51 --------------------------~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al 87 (336)
T 2p2s_A 51 --------------------------SVPFAASAEQLITDASIDLIACAVIPCDRAELALRTL 87 (336)
T ss_dssp --------------------------TCCBCSCHHHHHTCTTCCEEEECSCGGGHHHHHHHHH
T ss_pred --------------------------CCcccCCHHHHhhCCCCCEEEEeCChhhHHHHHHHHH
Confidence 1234577888776 5899999999987776666544
No 223
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.45 E-value=0.00039 Score=65.90 Aligned_cols=80 Identities=13% Similarity=0.168 Sum_probs=53.9
Q ss_pred CceEEEECCCHHHHHHHHH-H-HHhcCCCCCCeeEE-EEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhh
Q 019978 43 PLRIVGVGAGAWGSVFTAM-L-QDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~-L-a~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (333)
++||+|||+|.||..+... + ....+ .+|. +++++++..+. ...
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~~~-----~~l~av~d~~~~~~~~--------------------------~~~--- 47 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRKDS-----WHVAHIFRRHAKPEEQ--------------------------API--- 47 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCTTT-----EEEEEEECSSCCGGGG--------------------------SGG---
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcCCC-----eEEEEEEcCCHhHHHH--------------------------HHh---
Confidence 4799999999999864333 3 33212 6766 88998865421 000
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcC--CCEEEEecCchhHHHHHHHHH
Q 019978 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD--ADIVINGLPSTETKEVFEEIS 181 (333)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~--aDlIIlaVps~~~~~vl~~i~ 181 (333)
. ..+.+.+|+++.+.+ .|+|++|+|+....+++....
T Consensus 48 ------~-------------------~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al 86 (345)
T 3f4l_A 48 ------Y-------------------SHIHFTSDLDEVLNDPDVKLVVVCTHADSHFEYAKRAL 86 (345)
T ss_dssp ------G-------------------TTCEEESCTHHHHTCTTEEEEEECSCGGGHHHHHHHHH
T ss_pred ------c-------------------CCCceECCHHHHhcCCCCCEEEEcCChHHHHHHHHHHH
Confidence 0 034566888888775 899999999987777766544
No 224
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=97.43 E-value=0.00037 Score=62.39 Aligned_cols=97 Identities=16% Similarity=0.178 Sum_probs=64.8
Q ss_pred hHHhhhHHHHhhccCCCCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeE-EEEecCCcchhhhhhhhHHHHHhhhhhH
Q 019978 25 LEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDV 103 (333)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~ 103 (333)
+++-++++++..|... .+||+|||+|.+|.+++..+....| +++ -++|.++++..+
T Consensus 64 v~~L~~~~~~~lg~~~--~~rV~IIGaG~~G~~la~~~~~~~g-----~~iVg~~D~dp~k~g~---------------- 120 (211)
T 2dt5_A 64 VPVLKRELRHILGLNR--KWGLCIVGMGRLGSALADYPGFGES-----FELRGFFDVDPEKVGR---------------- 120 (211)
T ss_dssp HHHHHHHHHHHHTTTS--CEEEEEECCSHHHHHHHHCSCCCSS-----EEEEEEEESCTTTTTC----------------
T ss_pred hHHHHHHHHHHhCcCC--CCEEEEECccHHHHHHHHhHhhcCC-----cEEEEEEeCCHHHHhh----------------
Confidence 4444566667667543 4799999999999999986322103 554 477888764321
Q ss_pred HHHhhhcccccchhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc-CCCEEEEecCchhHHHHHHHHHh
Q 019978 104 LRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW-DADIVINGLPSTETKEVFEEISR 182 (333)
Q Consensus 104 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~-~aDlIIlaVps~~~~~vl~~i~~ 182 (333)
...++ ++...+++++.++ +.|.|++|+|+....++++.+..
T Consensus 121 ---------~i~gv-----------------------------~V~~~~dl~ell~~~ID~ViIA~Ps~~~~ei~~~l~~ 162 (211)
T 2dt5_A 121 ---------PVRGG-----------------------------VIEHVDLLPQRVPGRIEIALLTVPREAAQKAADLLVA 162 (211)
T ss_dssp ---------EETTE-----------------------------EEEEGGGHHHHSTTTCCEEEECSCHHHHHHHHHHHHH
T ss_pred ---------hhcCC-----------------------------eeecHHhHHHHHHcCCCEEEEeCCchhHHHHHHHHHH
Confidence 11110 2444677877765 58999999999988888887764
No 225
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.41 E-value=0.00065 Score=65.03 Aligned_cols=79 Identities=19% Similarity=0.284 Sum_probs=54.3
Q ss_pred CCceEEEECCCHHHHH-HHHHHHHhcCCCCCCeeEE-EEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhh
Q 019978 42 DPLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~a-lA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (333)
.++||+|||+|.||.. .+..+... . +.+|. +++++++++++ ..+
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~l~~~-~----~~~l~av~d~~~~~~~~-------------------------~~~---- 51 (364)
T 3e82_A 6 NTINIALIGYGFVGKTFHAPLIRSV-P----GLNLAFVASRDEEKVKR-------------------------DLP---- 51 (364)
T ss_dssp -CEEEEEECCSHHHHHTHHHHHHTS-T----TEEEEEEECSCHHHHHH-------------------------HCT----
T ss_pred CcceEEEECCCHHHHHHHHHHHhhC-C----CeEEEEEEcCCHHHHHh-------------------------hCC----
Confidence 4589999999999996 56666554 2 16654 77887653210 000
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHH
Q 019978 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEIS 181 (333)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~--~aDlIIlaVps~~~~~vl~~i~ 181 (333)
...+.+|.++.+. +.|+|++|+|.....+++....
T Consensus 52 ---------------------------~~~~~~~~~~ll~~~~~D~V~i~tp~~~H~~~~~~al 88 (364)
T 3e82_A 52 ---------------------------DVTVIASPEAAVQHPDVDLVVIASPNATHAPLARLAL 88 (364)
T ss_dssp ---------------------------TSEEESCHHHHHTCTTCSEEEECSCGGGHHHHHHHHH
T ss_pred ---------------------------CCcEECCHHHHhcCCCCCEEEEeCChHHHHHHHHHHH
Confidence 2456688888887 6899999999987776666543
No 226
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=97.41 E-value=0.0012 Score=61.57 Aligned_cols=94 Identities=17% Similarity=0.174 Sum_probs=67.9
Q ss_pred CCceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 42 ~~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
..+||+|+|+ |.||...+..+.+. | .+ .++..++....+ ..
T Consensus 6 ~~~rVaViG~sG~~G~~~~~~l~~~-g-----~~-~V~~V~p~~~g~-------------------------~~------ 47 (288)
T 2nu8_A 6 KNTKVICQGFTGSQGTFHSEQAIAY-G-----TK-MVGGVTPGKGGT-------------------------TH------ 47 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHH-T-----CE-EEEEECTTCTTC-------------------------EE------
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-C-----Ce-EEEEeCCCcccc-------------------------ee------
Confidence 4579999998 99999999999887 7 66 455666532100 00
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeee
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~--~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~k 198 (333)
..+.+..+++++.+ ++|++++++|+....+++++.... . -..+|.++.
T Consensus 48 -------------------------~G~~vy~sl~el~~~~~~D~viI~tP~~~~~~~~~ea~~~-G----i~~iVi~t~ 97 (288)
T 2nu8_A 48 -------------------------LGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDA-G----IKLIITITE 97 (288)
T ss_dssp -------------------------TTEEEESSHHHHHHHHCCCEEEECCCGGGHHHHHHHHHHT-T----CSEEEECCC
T ss_pred -------------------------CCeeccCCHHHHhhcCCCCEEEEecCHHHHHHHHHHHHHC-C----CCEEEEECC
Confidence 13556677888777 899999999999999999887653 1 234566777
Q ss_pred cCccc
Q 019978 199 GVEAE 203 (333)
Q Consensus 199 Gi~~~ 203 (333)
|+..+
T Consensus 98 G~~~~ 102 (288)
T 2nu8_A 98 GIPTL 102 (288)
T ss_dssp CCCHH
T ss_pred CCCHH
Confidence 88654
No 227
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.41 E-value=0.00016 Score=64.53 Aligned_cols=37 Identities=14% Similarity=-0.031 Sum_probs=32.4
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
.++|.|+|+|.+|..++..|.+. | + |++++++++.++
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~-g-----~-v~vid~~~~~~~ 45 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGS-E-----V-FVLAEDENVRKK 45 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTS-E-----E-EEEESCGGGHHH
T ss_pred CCEEEEECCChHHHHHHHHHHhC-C-----e-EEEEECCHHHHH
Confidence 46899999999999999999888 7 9 999999987654
No 228
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.40 E-value=0.00034 Score=68.79 Aligned_cols=86 Identities=13% Similarity=0.042 Sum_probs=56.7
Q ss_pred CCceEEEECCCHHHH-HHHHHHHHhcCCCCCCeeE-EEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhh
Q 019978 42 DPLRIVGVGAGAWGS-VFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~-alA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (333)
.++||+|||+|.||. .++..|.+. + +.++ .++++++++++++.. .. + .+.
T Consensus 82 ~~irigiIG~G~~g~~~~~~~l~~~-~----~~~lvav~d~~~~~~~~~a~--------~~---------g---~~~--- 133 (433)
T 1h6d_A 82 RRFGYAIVGLGKYALNQILPGFAGC-Q----HSRIEALVSGNAEKAKIVAA--------EY---------G---VDP--- 133 (433)
T ss_dssp CCEEEEEECCSHHHHHTHHHHTTTC-S----SEEEEEEECSCHHHHHHHHH--------HT---------T---CCG---
T ss_pred CceEEEEECCcHHHHHHHHHHHhhC-C----CcEEEEEEcCCHHHHHHHHH--------Hh---------C---CCc---
Confidence 357999999999997 888888664 2 1564 578888765432110 00 0 000
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHH
Q 019978 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEIS 181 (333)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~--~aDlIIlaVps~~~~~vl~~i~ 181 (333)
..+.+.+|.++.++ +.|+|++|+|.....+++....
T Consensus 134 --------------------------~~~~~~~~~~~ll~~~~vD~V~iatp~~~h~~~~~~al 171 (433)
T 1h6d_A 134 --------------------------RKIYDYSNFDKIAKDPKIDAVYIILPNSLHAEFAIRAF 171 (433)
T ss_dssp --------------------------GGEECSSSGGGGGGCTTCCEEEECSCGGGHHHHHHHHH
T ss_pred --------------------------ccccccCCHHHHhcCCCCCEEEEcCCchhHHHHHHHHH
Confidence 01334567777765 6899999999998777776654
No 229
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.36 E-value=0.00073 Score=62.68 Aligned_cols=127 Identities=19% Similarity=0.137 Sum_probs=74.8
Q ss_pred CceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEE-EEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 43 ~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
+|||+|+|+ |.||..++..+....| +++. +++++++.... . .-..+-++
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~-----~elva~~d~~~~~~~g-----------~----------d~~~~~g~--- 55 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEG-----VQLGAALEREGSSLLG-----------S----------DAGELAGA--- 55 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTT-----EECCCEECCTTCTTCS-----------C----------CTTCSSSS---
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCC-----CEEEEEEecCchhhhh-----------h----------hHHHHcCC---
Confidence 489999998 9999999998875424 7776 67776542100 0 00000000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecC
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi 200 (333)
. ...+.+++|+++++.++|+||-++++....+.+..... . +..+|+-+.|+
T Consensus 56 ------~-----------------~~~v~~~~dl~~~l~~~DvVIDft~p~~~~~~~~~a~~---~---G~~vVigTtG~ 106 (273)
T 1dih_A 56 ------G-----------------KTGVTVQSSLDAVKDDFDVFIDFTRPEGTLNHLAFCRQ---H---GKGMVIGTTGF 106 (273)
T ss_dssp ------S-----------------CCSCCEESCSTTTTTSCSEEEECSCHHHHHHHHHHHHH---T---TCEEEECCCCC
T ss_pred ------C-----------------cCCceecCCHHHHhcCCCEEEEcCChHHHHHHHHHHHh---C---CCCEEEECCCC
Confidence 0 01345677888878889999966666655555554433 2 45666655577
Q ss_pred cccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHHH
Q 019978 201 EAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEI 240 (333)
Q Consensus 201 ~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ev 240 (333)
..+. .+.+.+.-. . ..++..||+...+
T Consensus 107 ~~e~---------~~~L~~~a~--~--~~vv~a~N~siGv 133 (273)
T 1dih_A 107 DEAG---------KQAIRDAAA--D--IAIVFAANFSVGV 133 (273)
T ss_dssp CHHH---------HHHHHHHTT--T--SCEEECSCCCHHH
T ss_pred CHHH---------HHHHHHhcC--C--CCEEEEecCcHHH
Confidence 6541 133443321 1 2367788876543
No 230
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.36 E-value=0.00084 Score=63.76 Aligned_cols=79 Identities=13% Similarity=0.161 Sum_probs=54.5
Q ss_pred CCceEEEECCCHHHHH-HHHHHHHhcCCCCCCeeEE-EEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhh
Q 019978 42 DPLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~a-lA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (333)
.++||+|||+|.||.. .+..+... . +.+|. +++++++++++ ...
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~~~~~-~----~~~l~av~d~~~~~~~~-------------------------~~~---- 51 (352)
T 3kux_A 6 DKIKVGLLGYGYASKTFHAPLIMGT-P----GLELAGVSSSDASKVHA-------------------------DWP---- 51 (352)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTS-T----TEEEEEEECSCHHHHHT-------------------------TCS----
T ss_pred CCceEEEECCCHHHHHHHHHHHhhC-C----CcEEEEEECCCHHHHHh-------------------------hCC----
Confidence 4589999999999997 66666654 2 16654 77887653210 011
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcC--CCEEEEecCchhHHHHHHHHH
Q 019978 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD--ADIVINGLPSTETKEVFEEIS 181 (333)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~--aDlIIlaVps~~~~~vl~~i~ 181 (333)
.+.+.+|+++.+.+ .|+|++|+|+....+++....
T Consensus 52 ---------------------------~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al 88 (352)
T 3kux_A 52 ---------------------------AIPVVSDPQMLFNDPSIDLIVIPTPNDTHFPLAQSAL 88 (352)
T ss_dssp ---------------------------SCCEESCHHHHHHCSSCCEEEECSCTTTHHHHHHHHH
T ss_pred ---------------------------CCceECCHHHHhcCCCCCEEEEeCChHHHHHHHHHHH
Confidence 23456888888765 899999999987766665543
No 231
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.36 E-value=0.00065 Score=63.71 Aligned_cols=38 Identities=29% Similarity=0.292 Sum_probs=27.5
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEE-EEecCCcch
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSV 85 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~-l~~r~~~~~ 85 (333)
++||+|||+|.||..++..+.+..+ .++. +++++++.+
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~~~-----~elvav~d~~~~~~ 47 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREAPD-----FEIAGIVRRNPAEV 47 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTT-----EEEEEEECC-----
T ss_pred CCEEEEECChHHHHHHHHHHhcCCC-----CEEEEEEcCCHHHH
Confidence 5799999999999999999887513 6776 788887643
No 232
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=97.35 E-value=0.00014 Score=67.88 Aligned_cols=37 Identities=16% Similarity=0.084 Sum_probs=33.6
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCe-eEEEEecCCcchh
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVD 86 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~-~V~l~~r~~~~~~ 86 (333)
+++.|+|+|.+|.+++..|++. | . +|++++|+.++++
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~-G-----~~~v~v~~R~~~~a~ 155 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKI-V-----RPTLTVANRTMSRFN 155 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT-C-----CSCCEEECSCGGGGT
T ss_pred CEEEEECCcHHHHHHHHHHHHC-C-----CCEEEEEeCCHHHHH
Confidence 6899999999999999999998 8 6 8999999987654
No 233
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.35 E-value=0.00059 Score=66.16 Aligned_cols=88 Identities=17% Similarity=0.150 Sum_probs=57.7
Q ss_pred CCCceEEEECCCHHHHHHHHHHHHhcCC----CCCCeeEE-EEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccc
Q 019978 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGY----LRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLK 115 (333)
Q Consensus 41 ~~~~kI~IIGaG~mG~alA~~La~~~G~----~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~ 115 (333)
.+++||+|||+|.||...+..+.+. +. +.++.+|+ +++++++++++..+ + +.
T Consensus 24 s~klrvgiIG~G~ig~~h~~~~~~~-~~~~~~~~~~~elvav~d~~~~~a~~~a~--------~--------------~~ 80 (412)
T 4gqa_A 24 SARLNIGLIGSGFMGQAHADAYRRA-AMFYPDLPKRPHLYALADQDQAMAERHAA--------K--------------LG 80 (412)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHH-HHHCTTSSSEEEEEEEECSSHHHHHHHHH--------H--------------HT
T ss_pred cccceEEEEcCcHHHHHHHHHHHhc-cccccccCCCeEEEEEEcCCHHHHHHHHH--------H--------------cC
Confidence 3568999999999999988888764 20 11113544 67888776543210 0 00
Q ss_pred hhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHh
Q 019978 116 YVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISR 182 (333)
Q Consensus 116 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~--~aDlIIlaVps~~~~~vl~~i~~ 182 (333)
..++.+|.++.+. +.|+|++|+|.....+++.....
T Consensus 81 -------------------------------~~~~y~d~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~ 118 (412)
T 4gqa_A 81 -------------------------------AEKAYGDWRELVNDPQVDVVDITSPNHLHYTMAMAAIA 118 (412)
T ss_dssp -------------------------------CSEEESSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHH
T ss_pred -------------------------------CCeEECCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHH
Confidence 1245678888775 57999999999877766665443
No 234
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=97.32 E-value=0.0016 Score=61.59 Aligned_cols=34 Identities=18% Similarity=0.439 Sum_probs=29.6
Q ss_pred ceEEEEC-CCHHHHHHHHHHHHh--cCCCCCCeeEEEEecCC
Q 019978 44 LRIVGVG-AGAWGSVFTAMLQDS--YGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 44 ~kI~IIG-aG~mG~alA~~La~~--~G~~~~~~~V~l~~r~~ 82 (333)
|||+|+| +|.+|.+++..|+.+ +. .++.++|+++
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~-----~el~L~Di~~ 37 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSG-----SELSLYDIAP 37 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTT-----EEEEEECSST
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCC-----ceEEEEecCC
Confidence 7999999 799999999999875 22 6899999987
No 235
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.31 E-value=0.0011 Score=63.15 Aligned_cols=80 Identities=14% Similarity=0.140 Sum_probs=55.4
Q ss_pred CCceEEEECCCHHHHH-HHHHHHHhcCCCCCCeeEE-EEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhh
Q 019978 42 DPLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~a-lA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (333)
.++||+|||+|.||.. .+..+....+ .+|. +++++++++.+ .++
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~-----~~l~av~d~~~~~~~~-------------------------~~~---- 49 (362)
T 3fhl_A 4 EIIKTGLAAFGMSGQVFHAPFISTNPH-----FELYKIVERSKELSKE-------------------------RYP---- 49 (362)
T ss_dssp CCEEEEESCCSHHHHHTTHHHHHHCTT-----EEEEEEECSSCCGGGT-------------------------TCT----
T ss_pred CceEEEEECCCHHHHHHHHHHHhhCCC-----eEEEEEEcCCHHHHHH-------------------------hCC----
Confidence 3579999999999997 5666655412 6654 78888764210 011
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcC--CCEEEEecCchhHHHHHHHHHh
Q 019978 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD--ADIVINGLPSTETKEVFEEISR 182 (333)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~--aDlIIlaVps~~~~~vl~~i~~ 182 (333)
.+.+.+|.++.+.+ .|+|++|+|.....+++.....
T Consensus 50 ---------------------------~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~ 87 (362)
T 3fhl_A 50 ---------------------------QASIVRSFKELTEDPEIDLIVVNTPDNTHYEYAGMALE 87 (362)
T ss_dssp ---------------------------TSEEESCSHHHHTCTTCCEEEECSCGGGHHHHHHHHHH
T ss_pred ---------------------------CCceECCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHH
Confidence 24456788888765 8999999999877777665443
No 236
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=97.28 E-value=0.00058 Score=66.67 Aligned_cols=84 Identities=15% Similarity=0.172 Sum_probs=54.9
Q ss_pred CCceEEEECCCH---HHHHHHHHHHHhcCCCCCCeeEE--EEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccch
Q 019978 42 DPLRIVGVGAGA---WGSVFTAMLQDSYGYLRDKVLIR--IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKY 116 (333)
Q Consensus 42 ~~~kI~IIGaG~---mG~alA~~La~~~G~~~~~~~V~--l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~ 116 (333)
.++||+|||+|. ||...+..+... + +.+++ ++++++++++++.. . + +
T Consensus 36 ~~~rvgiiG~G~~~~ig~~h~~~~~~~-~----~~~lva~v~d~~~~~a~~~a~--------~-------------~--g 87 (417)
T 3v5n_A 36 KRIRLGMVGGGSGAFIGAVHRIAARLD-D----HYELVAGALSSTPEKAEASGR--------E-------------L--G 87 (417)
T ss_dssp CCEEEEEESCC--CHHHHHHHHHHHHT-S----CEEEEEEECCSSHHHHHHHHH--------H-------------H--T
T ss_pred CcceEEEEcCCCchHHHHHHHHHHhhC-C----CcEEEEEEeCCCHHHHHHHHH--------H-------------c--C
Confidence 357999999999 999988887766 4 15654 67888775543210 0 0 0
Q ss_pred hhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcC-------CCEEEEecCchhHHHHHHHHH
Q 019978 117 VEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD-------ADIVINGLPSTETKEVFEEIS 181 (333)
Q Consensus 117 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~-------aDlIIlaVps~~~~~vl~~i~ 181 (333)
++ ...+.+|+++.+.+ .|+|++|+|.....+++....
T Consensus 88 ---------~~-------------------~~~~~~~~~~ll~~~~~~~~~vD~V~I~tp~~~H~~~~~~al 131 (417)
T 3v5n_A 88 ---------LD-------------------PSRVYSDFKEMAIREAKLKNGIEAVAIVTPNHVHYAAAKEFL 131 (417)
T ss_dssp ---------CC-------------------GGGBCSCHHHHHHHHHHCTTCCSEEEECSCTTSHHHHHHHHH
T ss_pred ---------CC-------------------cccccCCHHHHHhcccccCCCCcEEEECCCcHHHHHHHHHHH
Confidence 00 11245677777654 899999999987766666544
No 237
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=97.27 E-value=0.0021 Score=58.50 Aligned_cols=33 Identities=24% Similarity=0.361 Sum_probs=30.7
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCe-eEEEEecCC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPG 82 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~-~V~l~~r~~ 82 (333)
++|.|||+|.+|+.++..|+.. | . +++++|++.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~-G-----v~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASA-G-----VGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-T-----CSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHc-C-----CCeEEEEcCCC
Confidence 6999999999999999999999 8 5 899999986
No 238
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=97.26 E-value=0.0011 Score=65.16 Aligned_cols=22 Identities=27% Similarity=0.305 Sum_probs=19.2
Q ss_pred CeEEecCHHHHhcCCCEEEEec
Q 019978 147 PLKVVTNLQEAVWDADIVINGL 168 (333)
Q Consensus 147 ~i~~t~d~~ea~~~aDlIIlaV 168 (333)
.++.++|..+++++||+||++.
T Consensus 60 ~v~~t~d~~~al~~AD~Viita 81 (417)
T 1up7_A 60 KVLISDTFEGAVVDAKYVIFQF 81 (417)
T ss_dssp EEEECSSHHHHHTTCSEEEECC
T ss_pred EEEEeCCHHHHhCCCCEEEEcC
Confidence 4677789888899999999988
No 239
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=97.25 E-value=0.00048 Score=63.87 Aligned_cols=64 Identities=16% Similarity=0.298 Sum_probs=49.5
Q ss_pred cccccccccchHHhhhHHHHhhccCCCCCceEEEECCCHHHHHHHHHHHHhcCCCCCCe-eEEEEecCCcchhh
Q 019978 15 NGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDR 87 (333)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~-~V~l~~r~~~~~~~ 87 (333)
+|-++.+|-...-=+.++++ .+.. ..++|.|+|+|.+|.+++..|++. | . +|++|+|+.+++++
T Consensus 94 ~g~l~g~NTD~~G~~~~l~~-~~~~--~~~~vlvlGaGgaarav~~~L~~~-G-----~~~i~v~nRt~~ka~~ 158 (271)
T 1npy_A 94 NGFLRAYNTDYIAIVKLIEK-YHLN--KNAKVIVHGSGGMAKAVVAAFKNS-G-----FEKLKIYARNVKTGQY 158 (271)
T ss_dssp TTEEEEECHHHHHHHHHHHH-TTCC--TTSCEEEECSSTTHHHHHHHHHHT-T-----CCCEEEECSCHHHHHH
T ss_pred CCEEEeecCCHHHHHHHHHH-hCCC--CCCEEEEECCcHHHHHHHHHHHHC-C-----CCEEEEEeCCHHHHHH
Confidence 56566677777666677765 3443 236899999999999999999998 7 5 79999999876543
No 240
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.24 E-value=0.00081 Score=63.47 Aligned_cols=36 Identities=19% Similarity=0.371 Sum_probs=28.5
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCee-EEEEecCCc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGR 83 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~-V~l~~r~~~ 83 (333)
++||+|||+|+||..++..+.+. + +.+ |.+++++++
T Consensus 3 ~irV~IiG~G~mG~~~~~~l~~~-~----~~elvav~d~~~~ 39 (320)
T 1f06_A 3 NIRVAIVGYGNLGRSVEKLIAKQ-P----DMDLVGIFSRRAT 39 (320)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTC-S----SEEEEEEEESSSC
T ss_pred CCEEEEEeecHHHHHHHHHHhcC-C----CCEEEEEEcCCHH
Confidence 47999999999999999998765 3 155 457888764
No 241
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=97.24 E-value=0.00045 Score=68.26 Aligned_cols=89 Identities=13% Similarity=0.109 Sum_probs=61.5
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
++|+|+|.|.+|..+|..|... | .+|++|++++...... . .
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~-G-----a~Viv~D~~p~~a~~A----------~---------------~-------- 252 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGF-G-----ARVVVTEVDPINALQA----------A---------------M-------- 252 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHH----------H---------------H--------
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-C-----CEEEEECCChhhhHHH----------H---------------H--------
Confidence 7999999999999999999887 8 8999999987432110 0 0
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeec
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kG 199 (333)
. .... .++++++..+|+|+++.....+-. ++....+++ +++++.+..|
T Consensus 253 ----------~------------G~~~-~sL~eal~~ADVVilt~gt~~iI~--~e~l~~MK~---gAIVINvgRg 300 (436)
T 3h9u_A 253 ----------E------------GYQV-LLVEDVVEEAHIFVTTTGNDDIIT--SEHFPRMRD---DAIVCNIGHF 300 (436)
T ss_dssp ----------T------------TCEE-CCHHHHTTTCSEEEECSSCSCSBC--TTTGGGCCT---TEEEEECSSS
T ss_pred ----------h------------CCee-cCHHHHHhhCCEEEECCCCcCccC--HHHHhhcCC---CcEEEEeCCC
Confidence 0 1222 478899999999998776543211 122333455 6788887766
No 242
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=97.22 E-value=0.0011 Score=62.23 Aligned_cols=37 Identities=14% Similarity=0.036 Sum_probs=30.2
Q ss_pred ceEEEEC-CCHHHHHHHHHHHHhcCCCCCCeeEEEEec--CCcc
Q 019978 44 LRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRR--PGRS 84 (333)
Q Consensus 44 ~kI~IIG-aG~mG~alA~~La~~~G~~~~~~~V~l~~r--~~~~ 84 (333)
|||+|+| +|.+|++++..|+.. |.. .++.++|+ ++++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~-~~~---~el~L~Di~~~~~~ 40 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALR-DIA---DEVVFVDIPDKEDD 40 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCC---SEEEEECCGGGHHH
T ss_pred CEEEEECCCChHHHHHHHHHHhC-CCC---CEEEEEcCCCChhh
Confidence 7999999 999999999999887 621 26899998 5543
No 243
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.22 E-value=0.00072 Score=63.06 Aligned_cols=65 Identities=17% Similarity=0.164 Sum_probs=45.6
Q ss_pred cccccccccchHHhhhHHHHhhccCCCCCceEEEECCCHHHHHHHHHHHHhcCCCCCCe-eEEEEecCCcchhh
Q 019978 15 NGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDR 87 (333)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~-~V~l~~r~~~~~~~ 87 (333)
+|-++-.|-.-.-=+.++++... .-..+++.|+|+|.+|.+++..|++. | . +|++++|+.+++++
T Consensus 101 ~g~l~G~NTD~~G~~~~l~~~~~--~l~~k~vlVlGaGG~g~aia~~L~~~-G-----~~~v~i~~R~~~~a~~ 166 (283)
T 3jyo_A 101 TGHTTGHNTDVSGFGRGMEEGLP--NAKLDSVVQVGAGGVGNAVAYALVTH-G-----VQKLQVADLDTSRAQA 166 (283)
T ss_dssp TSCEEEECHHHHHHHHHHHHHCT--TCCCSEEEEECCSHHHHHHHHHHHHT-T-----CSEEEEECSSHHHHHH
T ss_pred CCeEEEecCCHHHHHHHHHHhCc--CcCCCEEEEECCcHHHHHHHHHHHHC-C-----CCEEEEEECCHHHHHH
Confidence 45455555444444445544221 22346999999999999999999998 8 6 79999999877654
No 244
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=97.20 E-value=0.0011 Score=63.44 Aligned_cols=94 Identities=13% Similarity=0.105 Sum_probs=62.0
Q ss_pred CceEEEECCCHHHH-HHHHHHHHhcCCCCCCee-EEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 43 PLRIVGVGAGAWGS-VFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 43 ~~kI~IIGaG~mG~-alA~~La~~~G~~~~~~~-V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
++||+|||+|.+|. .++..+... + .+ |-++++++++++++. + .+.
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~~-~-----~~lvav~d~~~~~a~~~a---------~-------------~~~----- 72 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLRA-G-----ARLAGFHEKDDALAAEFS---------A-------------VYA----- 72 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHHT-T-----CEEEEEECSCHHHHHHHH---------H-------------HSS-----
T ss_pred CcEEEEECcCHHHHHHHHHHhhcC-C-----cEEEEEEcCCHHHHHHHH---------H-------------HcC-----
Confidence 47999999999984 566666655 5 66 457888887554211 0 000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcC--CCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeee
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD--ADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~--aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~k 198 (333)
...+.+|.++.+.+ .|+|++|+|.....+++..... . ++.|+ +-|
T Consensus 73 --------------------------~~~~~~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~---a---GkhVl-~EK 119 (361)
T 3u3x_A 73 --------------------------DARRIATAEEILEDENIGLIVSAAVSSERAELAIRAMQ---H---GKDVL-VDK 119 (361)
T ss_dssp --------------------------SCCEESCHHHHHTCTTCCEEEECCCHHHHHHHHHHHHH---T---TCEEE-EES
T ss_pred --------------------------CCcccCCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHH---C---CCeEE-EeC
Confidence 13356788888764 8999999999887777765543 2 44443 566
Q ss_pred cCcc
Q 019978 199 GVEA 202 (333)
Q Consensus 199 Gi~~ 202 (333)
-+..
T Consensus 120 Pla~ 123 (361)
T 3u3x_A 120 PGMT 123 (361)
T ss_dssp CSCS
T ss_pred CCCC
Confidence 5554
No 245
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=97.16 E-value=0.00078 Score=65.21 Aligned_cols=84 Identities=10% Similarity=0.080 Sum_probs=56.2
Q ss_pred CceEEEECCCH---HHHHHHHHHHHhcCCCCCCeeEE--EEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchh
Q 019978 43 PLRIVGVGAGA---WGSVFTAMLQDSYGYLRDKVLIR--IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYV 117 (333)
Q Consensus 43 ~~kI~IIGaG~---mG~alA~~La~~~G~~~~~~~V~--l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~ 117 (333)
++||+|||+|. ||...+..+... + +.+++ ++++++++++++.. + + +
T Consensus 12 ~~rvgiiG~G~~~~ig~~h~~~~~~~-~----~~~lva~v~d~~~~~a~~~a~--------~-------------~--g- 62 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYIHRCAALRD-N----TFVLVAGAFDIDPIRGSAFGE--------Q-------------L--G- 62 (398)
T ss_dssp CEEEEEEECCTTCSSHHHHHHHHHGG-G----SEEEEEEECCSSHHHHHHHHH--------H-------------T--T-
T ss_pred cceEEEEcCCccchhHHHHHHHHhhC-C----CeEEEEEEeCCCHHHHHHHHH--------H-------------h--C-
Confidence 47999999999 999998888766 3 15665 57888765543110 0 0 0
Q ss_pred hhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcC-------CCEEEEecCchhHHHHHHHHHh
Q 019978 118 EARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD-------ADIVINGLPSTETKEVFEEISR 182 (333)
Q Consensus 118 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~-------aDlIIlaVps~~~~~vl~~i~~ 182 (333)
++ ...+.+|.++.+.+ .|+|++|+|.....+++.....
T Consensus 63 --------~~-------------------~~~~~~~~~~ll~~~~~~~~~vD~V~i~tp~~~H~~~~~~al~ 107 (398)
T 3dty_A 63 --------VD-------------------SERCYADYLSMFEQEARRADGIQAVSIATPNGTHYSITKAALE 107 (398)
T ss_dssp --------CC-------------------GGGBCSSHHHHHHHHTTCTTCCSEEEEESCGGGHHHHHHHHHH
T ss_pred --------CC-------------------cceeeCCHHHHHhcccccCCCCCEEEECCCcHHHHHHHHHHHH
Confidence 00 11345778777654 8999999999877776665543
No 246
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=97.15 E-value=0.0032 Score=61.07 Aligned_cols=42 Identities=14% Similarity=0.067 Sum_probs=31.5
Q ss_pred CCceEEEEC-CCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcc
Q 019978 42 DPLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (333)
Q Consensus 42 ~~~kI~IIG-aG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (333)
.++||+|+| +|.+|.+++..|+.. +.+.....+.|++.+.+.
T Consensus 31 ~~~KV~ViGAaG~VG~~la~~l~~~-~l~~e~~~l~L~d~d~~~ 73 (375)
T 7mdh_A 31 KLVNIAVSGAAGMISNHLLFKLASG-EVFGQDQPIALKLLGSER 73 (375)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHT-TTTCTTCCEEEEEECCGG
T ss_pred CCCEEEEECCCChHHHHHHHHHHcC-CcCCCCceeEEEecCccc
Confidence 467999999 799999999999987 644321247777766544
No 247
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.14 E-value=0.0028 Score=59.40 Aligned_cols=94 Identities=11% Similarity=0.012 Sum_probs=63.9
Q ss_pred CCceEEEECC-CHHHHHHHHHHHHhcCCCCCCee-EEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhh
Q 019978 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (333)
Q Consensus 42 ~~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~-V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (333)
.|+||+|||+ |.||...+..+... + .+ |-+++++++... . .+ ..+
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~-~-----~~lvav~d~~~~~~~-~---------~~-------------~~~---- 48 (312)
T 3o9z_A 2 HMTRFALTGLAGYIAPRHLKAIKEV-G-----GVLVASLDPATNVGL-V---------DS-------------FFP---- 48 (312)
T ss_dssp -CCEEEEECTTSSSHHHHHHHHHHT-T-----CEEEEEECSSCCCGG-G---------GG-------------TCT----
T ss_pred CceEEEEECCChHHHHHHHHHHHhC-C-----CEEEEEEcCCHHHHH-H---------Hh-------------hCC----
Confidence 4689999999 78999999999877 6 55 557888876421 0 00 011
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHh----------cCCCEEEEecCchhHHHHHHHHHhhhhccCC
Q 019978 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAV----------WDADIVINGLPSTETKEVFEEISRYWKERIT 189 (333)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~----------~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~ 189 (333)
...+.++.++.+ .+.|+|++|+|+....+++..... .
T Consensus 49 ---------------------------~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~tP~~~H~~~~~~al~---a--- 95 (312)
T 3o9z_A 49 ---------------------------EAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALR---L--- 95 (312)
T ss_dssp ---------------------------TCEEESCHHHHHHHHHHHHHTTCCCSEEEECSCGGGHHHHHHHHHH---T---
T ss_pred ---------------------------CCceeCCHHHHHHHhhhhcccCCCCcEEEECCCchhhHHHHHHHHH---C---
Confidence 245567777765 578999999999988777766554 2
Q ss_pred CCEEEEeeecCcc
Q 019978 190 VPVIISLAKGVEA 202 (333)
Q Consensus 190 ~~~Ivs~~kGi~~ 202 (333)
++.|+ +-|-+..
T Consensus 96 GkhVl-~EKPla~ 107 (312)
T 3o9z_A 96 GANAL-SEKPLVL 107 (312)
T ss_dssp TCEEE-ECSSSCS
T ss_pred CCeEE-EECCCCC
Confidence 44444 5665554
No 248
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=97.12 E-value=0.00056 Score=66.56 Aligned_cols=40 Identities=15% Similarity=0.147 Sum_probs=35.1
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (333)
...||+|+|+|.+|...++.+... | .+|++|++++++++.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l-G-----a~V~v~D~~~~~l~~ 222 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL-G-----AKTTGYDVRPEVAEQ 222 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH-T-----CEEEEECSSGGGHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHH
Confidence 347999999999999999999887 8 899999999876543
No 249
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.10 E-value=0.0013 Score=62.67 Aligned_cols=79 Identities=24% Similarity=0.215 Sum_probs=53.6
Q ss_pred CCceEEEECCCHHHHH-HHHHHHHhcCCCCCCeeEE-EEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhh
Q 019978 42 DPLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~a-lA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (333)
.++||+|||+|.||.. .+..+... . +.+|. +++++++++. + .++
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~-~----~~~l~av~d~~~~~~~------------~-------------~~~---- 49 (358)
T 3gdo_A 4 DTIKVGILGYGLSGSVFHGPLLDVL-D----EYQISKIMTSRTEEVK------------R-------------DFP---- 49 (358)
T ss_dssp TCEEEEEECCSHHHHHTTHHHHTTC-T----TEEEEEEECSCHHHHH------------H-------------HCT----
T ss_pred CcceEEEEccCHHHHHHHHHHHhhC-C----CeEEEEEEcCCHHHHH------------h-------------hCC----
Confidence 3589999999999996 56666543 2 26654 6777764311 0 010
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHH
Q 019978 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEIS 181 (333)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~--~aDlIIlaVps~~~~~vl~~i~ 181 (333)
.+.+.+|+++.+. +.|+|++|+|.....+++....
T Consensus 50 ---------------------------~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al 86 (358)
T 3gdo_A 50 ---------------------------DAEVVHELEEITNDPAIELVIVTTPSGLHYEHTMACI 86 (358)
T ss_dssp ---------------------------TSEEESSTHHHHTCTTCCEEEECSCTTTHHHHHHHHH
T ss_pred ---------------------------CCceECCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHH
Confidence 2445678888877 6899999999987776666544
No 250
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=97.10 E-value=0.003 Score=62.65 Aligned_cols=40 Identities=23% Similarity=0.245 Sum_probs=30.9
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCee-EEEEecCCcchh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVD 86 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~-V~l~~r~~~~~~ 86 (333)
+++||+|||+|.||..++..+.+..+ .+ |-++++++++++
T Consensus 22 k~IRVGIIGaG~iG~~~~~~l~~~~~-----veLvAV~D~~~era~ 62 (446)
T 3upl_A 22 KPIRIGLIGAGEMGTDIVTQVARMQG-----IEVGALSARRLPNTF 62 (446)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTSSS-----EEEEEEECSSTHHHH
T ss_pred CceEEEEECChHHHHHHHHHHhhCCC-----cEEEEEEeCCHHHHH
Confidence 46899999999999999988865412 55 457888887654
No 251
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=97.09 E-value=0.00064 Score=68.26 Aligned_cols=91 Identities=12% Similarity=0.094 Sum_probs=62.9
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
.-++|+|||.|.+|..+|..+..- | .+|++|++++....+ . ..
T Consensus 276 ~GktVgIIG~G~IG~~vA~~l~~~-G-----~~V~v~d~~~~~~~~-----------a--------------~~------ 318 (494)
T 3d64_A 276 AGKIAVVAGYGDVGKGCAQSLRGL-G-----ATVWVTEIDPICALQ-----------A--------------AM------ 318 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEECSCHHHHHH-----------H--------------HT------
T ss_pred CCCEEEEEccCHHHHHHHHHHHHC-C-----CEEEEEeCChHhHHH-----------H--------------HH------
Confidence 447999999999999999999877 7 899999998753210 0 00
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeec
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kG 199 (333)
. .+.+ .++++++..+|+|++++....+-. ++....+++ ++++|.+..|
T Consensus 319 ------------~------------G~~~-~~l~ell~~aDiVi~~~~t~~lI~--~~~l~~MK~---gAilINvgrg 366 (494)
T 3d64_A 319 ------------E------------GYRV-VTMEYAADKADIFVTATGNYHVIN--HDHMKAMRH---NAIVCNIGHF 366 (494)
T ss_dssp ------------T------------TCEE-CCHHHHTTTCSEEEECSSSSCSBC--HHHHHHCCT---TEEEEECSSS
T ss_pred ------------c------------CCEe-CCHHHHHhcCCEEEECCCcccccC--HHHHhhCCC---CcEEEEcCCC
Confidence 0 1222 368889999999999985443210 223334555 6788888766
No 252
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=97.09 E-value=0.00072 Score=67.65 Aligned_cols=91 Identities=16% Similarity=0.099 Sum_probs=63.2
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
.-++|+|||.|.+|..+|..+... | .+|++|++++....+ . ..
T Consensus 256 ~GktVgIIG~G~IG~~vA~~l~~~-G-----~~Viv~d~~~~~~~~-----------a--------------~~------ 298 (479)
T 1v8b_A 256 SGKIVVICGYGDVGKGCASSMKGL-G-----ARVYITEIDPICAIQ-----------A--------------VM------ 298 (479)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHH-T-----CEEEEECSCHHHHHH-----------H--------------HT------
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC-c-----CEEEEEeCChhhHHH-----------H--------------HH------
Confidence 447999999999999999999887 8 899999998753210 0 00
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeec
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kG 199 (333)
. .+.+ .++++++..+|+|++++....+-. ++....+++ +++++.+..|
T Consensus 299 ------------~------------g~~~-~~l~ell~~aDiVi~~~~t~~lI~--~~~l~~MK~---gailiNvgrg 346 (479)
T 1v8b_A 299 ------------E------------GFNV-VTLDEIVDKGDFFITCTGNVDVIK--LEHLLKMKN---NAVVGNIGHF 346 (479)
T ss_dssp ------------T------------TCEE-CCHHHHTTTCSEEEECCSSSSSBC--HHHHTTCCT---TCEEEECSST
T ss_pred ------------c------------CCEe-cCHHHHHhcCCEEEECCChhhhcC--HHHHhhcCC---CcEEEEeCCC
Confidence 0 1222 468888999999999975443211 122234565 7888888765
No 253
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.08 E-value=0.002 Score=61.08 Aligned_cols=35 Identities=11% Similarity=0.220 Sum_probs=27.0
Q ss_pred eEEecCHHHHhcC--CCEEEEecCchhHHHHHHHHHh
Q 019978 148 LKVVTNLQEAVWD--ADIVINGLPSTETKEVFEEISR 182 (333)
Q Consensus 148 i~~t~d~~ea~~~--aDlIIlaVps~~~~~vl~~i~~ 182 (333)
+.+.+|+++.+.+ .|+|++|+|+....+++.....
T Consensus 51 ~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~ 87 (349)
T 3i23_A 51 VNFTADLNELLTDPEIELITICTPAHTHYDLAKQAIL 87 (349)
T ss_dssp CEEESCTHHHHSCTTCCEEEECSCGGGHHHHHHHHHH
T ss_pred CeEECCHHHHhcCCCCCEEEEeCCcHHHHHHHHHHHH
Confidence 4566888888775 8999999999877777665543
No 254
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=97.08 E-value=0.00085 Score=67.41 Aligned_cols=37 Identities=11% Similarity=0.145 Sum_probs=32.7
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcch
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (333)
-++|+|+|+|.+|..+|+.+... | .+|++|+++++++
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~-G-----a~Viv~d~~~~~~ 310 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQ-G-----ARVSVTEIDPINA 310 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHH
T ss_pred cCEEEEEccCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHH
Confidence 37999999999999999999887 8 8999999987643
No 255
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=97.07 E-value=0.0028 Score=62.22 Aligned_cols=87 Identities=18% Similarity=0.134 Sum_probs=57.2
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeE-EEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
.++||+|||+|.||...+..+... . +.+| -++++++++++++.. .+.+ + +
T Consensus 19 ~~~rvgiIG~G~~g~~h~~~l~~~-~----~~~lvav~d~~~~~~~~~a~-----~~~~-------------~--g---- 69 (444)
T 2ixa_A 19 KKVRIAFIAVGLRGQTHVENMARR-D----DVEIVAFADPDPYMVGRAQE-----ILKK-------------N--G---- 69 (444)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTC-T----TEEEEEEECSCHHHHHHHHH-----HHHH-------------T--T----
T ss_pred CCceEEEEecCHHHHHHHHHHHhC-C----CcEEEEEEeCCHHHHHHHHH-----HHHh-------------c--C----
Confidence 357999999999999998888764 2 2665 588888876543210 0000 0 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEec----CHHHHhc--CCCEEEEecCchhHHHHHHHHH
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVT----NLQEAVW--DADIVINGLPSTETKEVFEEIS 181 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~----d~~ea~~--~aDlIIlaVps~~~~~vl~~i~ 181 (333)
+ ....+.+ |.++.++ +.|+|++|+|.....+++.+..
T Consensus 70 -----~-------------------~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~h~~~~~~al 112 (444)
T 2ixa_A 70 -----K-------------------KPAKVFGNGNDDYKNMLKDKNIDAVFVSSPWEWHHEHGVAAM 112 (444)
T ss_dssp -----C-------------------CCCEEECSSTTTHHHHTTCTTCCEEEECCCGGGHHHHHHHHH
T ss_pred -----C-------------------CCCceeccCCCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHH
Confidence 0 0133445 8888876 5899999999987766665543
No 256
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.06 E-value=0.0036 Score=58.85 Aligned_cols=81 Identities=14% Similarity=0.033 Sum_probs=57.0
Q ss_pred CCceEEEECC-CHHHHHHHHHHHHhcCCCCCCee-EEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhh
Q 019978 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (333)
Q Consensus 42 ~~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~-V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (333)
.|+||+|||+ |.||...+..+... + .+ |-+++++++.. .. .+ ..+
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~-~-----~~lvav~d~~~~~~-~~---------~~-------------~~~---- 48 (318)
T 3oa2_A 2 HMKNFALIGAAGYIAPRHMRAIKDT-G-----NCLVSAYDINDSVG-II---------DS-------------ISP---- 48 (318)
T ss_dssp -CCEEEEETTTSSSHHHHHHHHHHT-T-----CEEEEEECSSCCCG-GG---------GG-------------TCT----
T ss_pred CceEEEEECCCcHHHHHHHHHHHhC-C-----CEEEEEEcCCHHHH-HH---------Hh-------------hCC----
Confidence 4689999999 78999999999877 6 55 55788887642 10 00 011
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHh-----------cCCCEEEEecCchhHHHHHHHHHh
Q 019978 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAV-----------WDADIVINGLPSTETKEVFEEISR 182 (333)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~-----------~~aDlIIlaVps~~~~~vl~~i~~ 182 (333)
...+.+|.++.+ .+.|+|++|+|+....+++.....
T Consensus 49 ---------------------------~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~tP~~~H~~~~~~al~ 95 (318)
T 3oa2_A 49 ---------------------------QSEFFTEFEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLR 95 (318)
T ss_dssp ---------------------------TCEEESSHHHHHHHHHHHTTSTTTSCCEEEECSCGGGHHHHHHHHHH
T ss_pred ---------------------------CCcEECCHHHHHHhhhhhhhccCCCCcEEEECCCcHHHHHHHHHHHH
Confidence 244567777655 468999999999887777766544
No 257
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=97.04 E-value=0.0033 Score=59.38 Aligned_cols=87 Identities=16% Similarity=0.113 Sum_probs=59.2
Q ss_pred CceEEEECCCHHHH-HHHHHHHHhcCCCCCCeeEE-EEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 43 PLRIVGVGAGAWGS-VFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 43 ~~kI~IIGaG~mG~-alA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
++||+|||+|.||. ..+..+... . +.+|. +++++++..
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~-~----~~~lvav~d~~~~~~----------------------------------- 64 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKN-A----NFKLVATASRHGTVE----------------------------------- 64 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHC-T----TEEEEEEECSSCCCT-----------------------------------
T ss_pred CceEEEEecCHHHHHHHHHHHHhC-C----CeEEEEEEeCChhhc-----------------------------------
Confidence 47999999999998 688888765 2 15644 566665310
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcC---CCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEee
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD---ADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~---aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~ 197 (333)
.+.+.+|.++.+.+ .|+|++|+|+....+++..... . ++.|+ +-
T Consensus 65 --------------------------g~~~~~~~~~ll~~~~~vD~V~i~tp~~~H~~~~~~al~---a---GkhVl-~E 111 (330)
T 4ew6_A 65 --------------------------GVNSYTTIEAMLDAEPSIDAVSLCMPPQYRYEAAYKALV---A---GKHVF-LE 111 (330)
T ss_dssp --------------------------TSEEESSHHHHHHHCTTCCEEEECSCHHHHHHHHHHHHH---T---TCEEE-EC
T ss_pred --------------------------CCCccCCHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHH---c---CCcEE-Ee
Confidence 23355778877654 8999999999887777766543 2 44554 56
Q ss_pred ecCcc
Q 019978 198 KGVEA 202 (333)
Q Consensus 198 kGi~~ 202 (333)
|-+..
T Consensus 112 KP~a~ 116 (330)
T 4ew6_A 112 KPPGA 116 (330)
T ss_dssp SSSCS
T ss_pred CCCCC
Confidence 65543
No 258
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=97.03 E-value=0.003 Score=59.85 Aligned_cols=85 Identities=13% Similarity=0.159 Sum_probs=52.5
Q ss_pred ceEEEECCCHHHHHHHHHHHHh---cCCCCCCee-EEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhh
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDS---YGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~---~G~~~~~~~-V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (333)
-||+|||+|.||..-+..+... +... ++.+ |-++++++++++++.+ + +.
T Consensus 26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~-~~~~lvav~d~~~~~a~~~a~--------~--------------~g---- 78 (393)
T 4fb5_A 26 LGIGLIGTGYMGKCHALAWNAVKTVFGDV-ERPRLVHLAEANAGLAEARAG--------E--------------FG---- 78 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHTTHHHHHCSS-CCCEEEEEECC--TTHHHHHH--------H--------------HT----
T ss_pred ccEEEEcCCHHHHHHHHHHHhhhhhhccC-CCcEEEEEECCCHHHHHHHHH--------H--------------hC----
Confidence 5899999999998776655331 0000 1134 4578998876643211 0 00
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHh
Q 019978 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISR 182 (333)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~--~aDlIIlaVps~~~~~vl~~i~~ 182 (333)
-.++.+|.++.+. +.|+|++|+|+....+++.....
T Consensus 79 ---------------------------~~~~y~d~~ell~~~~iDaV~IatP~~~H~~~a~~al~ 116 (393)
T 4fb5_A 79 ---------------------------FEKATADWRALIADPEVDVVSVTTPNQFHAEMAIAALE 116 (393)
T ss_dssp ---------------------------CSEEESCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHH
T ss_pred ---------------------------CCeecCCHHHHhcCCCCcEEEECCChHHHHHHHHHHHh
Confidence 1135688888775 57999999999877776665543
No 259
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=97.00 E-value=0.0012 Score=64.36 Aligned_cols=37 Identities=27% Similarity=0.360 Sum_probs=33.0
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCe-eEEEEecCCcch
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSV 85 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~-~V~l~~r~~~~~ 85 (333)
-++|+|+|+|.||.+++..+... | . +|++++|+++++
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~-G-----~~~V~v~~r~~~ra 204 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDR-G-----VRAVLVANRTYERA 204 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHH-C-----CSEEEEECSSHHHH
T ss_pred CCEEEEEChHHHHHHHHHHHHHC-C-----CCEEEEEeCCHHHH
Confidence 36999999999999999999988 8 7 899999987654
No 260
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=96.99 E-value=0.0059 Score=56.94 Aligned_cols=94 Identities=18% Similarity=0.212 Sum_probs=68.2
Q ss_pred CCceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 42 ~~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
..+||+|+|+ |.||..++..+.+. | ++ .++..++.... ...
T Consensus 6 ~~~~VaVvGasG~~G~~~~~~l~~~-g-----~~-~v~~VnP~~~g-------------------------~~i------ 47 (288)
T 1oi7_A 6 RETRVLVQGITGREGQFHTKQMLTY-G-----TK-IVAGVTPGKGG-------------------------MEV------ 47 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHH-T-----CE-EEEEECTTCTT-------------------------CEE------
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHc-C-----Ce-EEEEECCCCCC-------------------------ceE------
Confidence 4579999998 99999999999887 7 67 45565553210 000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeee
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~--~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~k 198 (333)
..+.+..+++++.+ ++|++++++|+....+++++.... + -..+|.++.
T Consensus 48 -------------------------~G~~vy~sl~el~~~~~~Dv~Ii~vp~~~~~~~~~ea~~~-G----i~~vVi~t~ 97 (288)
T 1oi7_A 48 -------------------------LGVPVYDTVKEAVAHHEVDASIIFVPAPAAADAALEAAHA-G----IPLIVLITE 97 (288)
T ss_dssp -------------------------TTEEEESSHHHHHHHSCCSEEEECCCHHHHHHHHHHHHHT-T----CSEEEECCS
T ss_pred -------------------------CCEEeeCCHHHHhhcCCCCEEEEecCHHHHHHHHHHHHHC-C----CCEEEEECC
Confidence 13556677888777 899999999999999999887652 1 234666788
Q ss_pred cCccc
Q 019978 199 GVEAE 203 (333)
Q Consensus 199 Gi~~~ 203 (333)
|+...
T Consensus 98 G~~~~ 102 (288)
T 1oi7_A 98 GIPTL 102 (288)
T ss_dssp CCCHH
T ss_pred CCCHH
Confidence 88753
No 261
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=96.99 E-value=0.0013 Score=64.65 Aligned_cols=84 Identities=14% Similarity=0.116 Sum_probs=57.7
Q ss_pred CCceEEEECC----CHHHHHHHHHHHHh-cCCCCCCeeE-EEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccc
Q 019978 42 DPLRIVGVGA----GAWGSVFTAMLQDS-YGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLK 115 (333)
Q Consensus 42 ~~~kI~IIGa----G~mG~alA~~La~~-~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~ 115 (333)
.++||+|||+ |.||...+..|.+. .+ .+| -++++++++++++. +. +
T Consensus 19 ~~irvgiIG~g~~gG~~g~~~~~~l~~~~~~-----~~lvav~d~~~~~~~~~a---------~~------------~-- 70 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKTHYPAILQLSSQ-----FQITALYSPKIETSIATI---------QR------------L-- 70 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTTHHHHHHHTTTT-----EEEEEEECSSHHHHHHHH---------HH------------T--
T ss_pred CCCEEEEEcccCCCChHHHHHHHHHHhcCCC-----eEEEEEEeCCHHHHHHHH---------HH------------c--
Confidence 4579999999 99999999998764 23 665 57888876543211 00 0
Q ss_pred hhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHH
Q 019978 116 YVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEIS 181 (333)
Q Consensus 116 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~--~aDlIIlaVps~~~~~vl~~i~ 181 (333)
+ . ..+.+.+|+++.+. +.|+|++|+|.....+++....
T Consensus 71 g---------~-------------------~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al 110 (438)
T 3btv_A 71 K---------L-------------------SNATAFPTLESFASSSTIDMIVIAIQVASHYEVVMPLL 110 (438)
T ss_dssp T---------C-------------------TTCEEESSHHHHHHCSSCSEEEECSCHHHHHHHHHHHH
T ss_pred C---------C-------------------CcceeeCCHHHHhcCCCCCEEEEeCCcHHHHHHHHHHH
Confidence 0 0 02346678888775 6899999999987666665543
No 262
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=96.96 E-value=0.0026 Score=63.08 Aligned_cols=34 Identities=18% Similarity=0.115 Sum_probs=30.9
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
++|+|+|.|.+|..+|..+..- | .+|+++++++.
T Consensus 248 KTVgVIG~G~IGr~vA~~lraf-G-----a~Viv~d~dp~ 281 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGA-G-----ARVKVTEVDPI 281 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSHH
T ss_pred CEEEEECcCHHHHHHHHHHHHC-C-----CEEEEEeCCcc
Confidence 7999999999999999999877 8 89999998874
No 263
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=96.95 E-value=0.00093 Score=63.76 Aligned_cols=93 Identities=24% Similarity=0.249 Sum_probs=63.9
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhcC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (333)
++|+|||.|.+|..+|..+..- | .+|..|++...... .+ .
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~f-g-----~~v~~~d~~~~~~~-----------~~---------------~-------- 181 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAF-G-----MKVLCYDVVKREDL-----------KE---------------K-------- 181 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCHHH-----------HH---------------T--------
T ss_pred cEEEEECcchHHHHHHHhhccc-C-----ceeeecCCccchhh-----------hh---------------c--------
Confidence 6899999999999999998776 7 89999998653110 00 0
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHhhhhccCCCCEEEEeeecCc
Q 019978 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGVE 201 (333)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~-~~~~vl-~~i~~~l~~~~~~~~Ivs~~kGi~ 201 (333)
.+. ..++++.+..||+|++.+|-. .++.++ ++.-..+++ ++++|.++-|=.
T Consensus 182 -----------------------~~~-~~~l~ell~~sDivslh~Plt~~T~~li~~~~l~~mk~---~a~lIN~aRG~i 234 (334)
T 3kb6_A 182 -----------------------GCV-YTSLDELLKESDVISLHVPYTKETHHMINEERISLMKD---GVYLINTARGKV 234 (334)
T ss_dssp -----------------------TCE-ECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCT---TEEEEECSCGGG
T ss_pred -----------------------Cce-ecCHHHHHhhCCEEEEcCCCChhhccCcCHHHHhhcCC---CeEEEecCcccc
Confidence 122 246788899999999999954 233222 112233455 788999888744
Q ss_pred cc
Q 019978 202 AE 203 (333)
Q Consensus 202 ~~ 203 (333)
..
T Consensus 235 Vd 236 (334)
T 3kb6_A 235 VD 236 (334)
T ss_dssp BC
T ss_pred cc
Confidence 43
No 264
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=96.95 E-value=0.0006 Score=65.92 Aligned_cols=39 Identities=18% Similarity=0.279 Sum_probs=34.1
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
..++|+|+|+|.+|.+++..+... | .+|++|++++++++
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~-G-----a~V~~~d~~~~~l~ 205 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGM-G-----ATVTVLDINIDKLR 205 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-C-----CEEEEEeCCHHHHH
Confidence 347999999999999999999887 8 89999999986543
No 265
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=96.94 E-value=0.0026 Score=63.47 Aligned_cols=84 Identities=18% Similarity=0.166 Sum_probs=57.7
Q ss_pred CCceEEEECC----CHHHHHHHHHHHHh-cCCCCCCeeE-EEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccc
Q 019978 42 DPLRIVGVGA----GAWGSVFTAMLQDS-YGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLK 115 (333)
Q Consensus 42 ~~~kI~IIGa----G~mG~alA~~La~~-~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~ 115 (333)
.++||+|||+ |.||...+..|... .+ .+| -++++++++++++. +. +
T Consensus 38 ~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~-----~~lvav~d~~~~~a~~~a---------~~------------~-- 89 (479)
T 2nvw_A 38 RPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQ-----FQIVALYNPTLKSSLQTI---------EQ------------L-- 89 (479)
T ss_dssp CCEEEEEECCCSTTSHHHHTHHHHHHHTTTT-----EEEEEEECSCHHHHHHHH---------HH------------T--
T ss_pred CcCEEEEEcccCCCCHHHHHHHHHHHhcCCC-----eEEEEEEeCCHHHHHHHH---------HH------------c--
Confidence 4589999999 99999999998763 13 665 47888876543211 00 0
Q ss_pred hhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHH
Q 019978 116 YVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEIS 181 (333)
Q Consensus 116 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~--~aDlIIlaVps~~~~~vl~~i~ 181 (333)
+ . ..+.+.+|.++.+. +.|+|++|+|.....+++....
T Consensus 90 g---------~-------------------~~~~~~~d~~ell~~~~vD~V~I~tp~~~H~~~~~~al 129 (479)
T 2nvw_A 90 Q---------L-------------------KHATGFDSLESFAQYKDIDMIVVSVKVPEHYEVVKNIL 129 (479)
T ss_dssp T---------C-------------------TTCEEESCHHHHHHCTTCSEEEECSCHHHHHHHHHHHH
T ss_pred C---------C-------------------CcceeeCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHH
Confidence 0 0 02346688888775 6899999999987666665543
No 266
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=96.94 E-value=0.0067 Score=56.82 Aligned_cols=97 Identities=13% Similarity=0.157 Sum_probs=68.8
Q ss_pred CCCCCceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchh
Q 019978 39 AEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYV 117 (333)
Q Consensus 39 ~~~~~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~ 117 (333)
.-....+|+|+|+ |.||..++..+.+. | ++ .++..++.... ...
T Consensus 9 l~~~~~~vvV~Gasg~~G~~~~~~l~~~-g-----~~-~v~~VnP~~~g-------------------------~~i--- 53 (297)
T 2yv2_A 9 LVDSETRVLVQGITGREGSFHAKAMLEY-G-----TK-VVAGVTPGKGG-------------------------SEV--- 53 (297)
T ss_dssp CCSTTCEEEEETTTSHHHHHHHHHHHHH-T-----CE-EEEEECTTCTT-------------------------CEE---
T ss_pred hhCCCCEEEEECCCCCHHHHHHHHHHhC-C-----Cc-EEEEeCCCCCC-------------------------ceE---
Confidence 3334568889998 99999999999887 7 67 56666664210 000
Q ss_pred hhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--C-CCEEEEecCchhHHHHHHHHHhhhhccCCCCEEE
Q 019978 118 EARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--D-ADIVINGLPSTETKEVFEEISRYWKERITVPVII 194 (333)
Q Consensus 118 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~--~-aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Iv 194 (333)
..+.+..+++++.+ . +|++++++|+....+++++.... + -..+|
T Consensus 54 ----------------------------~G~~vy~sl~el~~~~~~~DvaIi~vp~~~~~~~v~ea~~~-G----i~~vV 100 (297)
T 2yv2_A 54 ----------------------------HGVPVYDSVKEALAEHPEINTSIVFVPAPFAPDAVYEAVDA-G----IRLVV 100 (297)
T ss_dssp ----------------------------TTEEEESSHHHHHHHCTTCCEEEECCCGGGHHHHHHHHHHT-T----CSEEE
T ss_pred ----------------------------CCEeeeCCHHHHhhcCCCCCEEEEecCHHHHHHHHHHHHHC-C----CCEEE
Confidence 13556677887765 5 99999999999999999987753 1 23466
Q ss_pred EeeecCccc
Q 019978 195 SLAKGVEAE 203 (333)
Q Consensus 195 s~~kGi~~~ 203 (333)
.++.|+..+
T Consensus 101 i~t~G~~~~ 109 (297)
T 2yv2_A 101 VITEGIPVH 109 (297)
T ss_dssp ECCCCCCHH
T ss_pred EECCCCCHH
Confidence 678898753
No 267
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=96.93 E-value=0.0031 Score=51.60 Aligned_cols=89 Identities=15% Similarity=0.081 Sum_probs=61.1
Q ss_pred CCceEEEECC----CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchh
Q 019978 42 DPLRIVGVGA----GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYV 117 (333)
Q Consensus 42 ~~~kI~IIGa----G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~ 117 (333)
.+++|+|||+ +.+|..+...|.+. | ++|+.++...+.+.
T Consensus 3 ~p~siAVVGaS~~~~~~g~~v~~~L~~~-g-----~~V~pVnP~~~~i~------------------------------- 45 (122)
T 3ff4_A 3 AMKKTLILGATPETNRYAYLAAERLKSH-G-----HEFIPVGRKKGEVL------------------------------- 45 (122)
T ss_dssp CCCCEEEETCCSCTTSHHHHHHHHHHHH-T-----CCEEEESSSCSEET-------------------------------
T ss_pred CCCEEEEEccCCCCCCHHHHHHHHHHHC-C-----CeEEEECCCCCcCC-------------------------------
Confidence 5679999998 67999999999998 8 77766655433211
Q ss_pred hhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEee
Q 019978 118 EARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (333)
Q Consensus 118 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~ 197 (333)
...+..++.+.=+ .|++++++|+..+.++++++... +- . .+.++
T Consensus 46 -----------------------------G~~~y~sl~dlp~-vDlavi~~p~~~v~~~v~e~~~~-g~----k-~v~~~ 89 (122)
T 3ff4_A 46 -----------------------------GKTIINERPVIEG-VDTVTLYINPQNQLSEYNYILSL-KP----K-RVIFN 89 (122)
T ss_dssp -----------------------------TEECBCSCCCCTT-CCEEEECSCHHHHGGGHHHHHHH-CC----S-EEEEC
T ss_pred -----------------------------CeeccCChHHCCC-CCEEEEEeCHHHHHHHHHHHHhc-CC----C-EEEEC
Confidence 1112222222223 79999999999999999998763 21 2 35578
Q ss_pred ecCccc
Q 019978 198 KGVEAE 203 (333)
Q Consensus 198 kGi~~~ 203 (333)
.|+..+
T Consensus 90 ~G~~~~ 95 (122)
T 3ff4_A 90 PGTENE 95 (122)
T ss_dssp TTCCCH
T ss_pred CCCChH
Confidence 887643
No 268
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=96.91 E-value=0.0076 Score=56.73 Aligned_cols=94 Identities=17% Similarity=0.186 Sum_probs=67.9
Q ss_pred CCceEEEE-CC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhh
Q 019978 42 DPLRIVGV-GA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (333)
Q Consensus 42 ~~~kI~II-Ga-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (333)
++.+++|| |+ |.+|...+..+.+. | ++ .+|..++....+ ..
T Consensus 12 ~~~siaVV~Gasg~~G~~~~~~l~~~-G-----~~-~v~~VnP~~~g~-------------------------~i----- 54 (305)
T 2fp4_A 12 DKNTKVICQGFTGKQGTFHSQQALEY-G-----TN-LVGGTTPGKGGK-------------------------TH----- 54 (305)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHH-T-----CE-EEEEECTTCTTC-------------------------EE-----
T ss_pred CCCcEEEEECCCCCHHHHHHHHHHHC-C-----Cc-EEEEeCCCcCcc-------------------------eE-----
Confidence 34578888 98 99999999999888 8 77 556666642100 00
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEee
Q 019978 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (333)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~--~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~ 197 (333)
..+.+..+++++.+ ..|+++++||+....+++++.... . -..++.++
T Consensus 55 --------------------------~G~~vy~sl~el~~~~~vD~avI~vP~~~~~~~~~e~i~~-G----i~~iv~~t 103 (305)
T 2fp4_A 55 --------------------------LGLPVFNTVKEAKEQTGATASVIYVPPPFAAAAINEAIDA-E----VPLVVCIT 103 (305)
T ss_dssp --------------------------TTEEEESSHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHT-T----CSEEEECC
T ss_pred --------------------------CCeeeechHHHhhhcCCCCEEEEecCHHHHHHHHHHHHHC-C----CCEEEEEC
Confidence 13556667777777 899999999999999999987653 1 24567788
Q ss_pred ecCccc
Q 019978 198 KGVEAE 203 (333)
Q Consensus 198 kGi~~~ 203 (333)
.|+...
T Consensus 104 ~G~~~~ 109 (305)
T 2fp4_A 104 EGIPQQ 109 (305)
T ss_dssp CCCCHH
T ss_pred CCCChH
Confidence 888653
No 269
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=96.91 E-value=0.0013 Score=61.10 Aligned_cols=39 Identities=21% Similarity=0.352 Sum_probs=35.4
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (333)
.+++.|+|+|.+|.+++..|++. | .+|++|+|+++++++
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~-G-----~~v~V~nRt~~ka~~ 156 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQ-G-----LQVSVLNRSSRGLDF 156 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCTTHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHH
Confidence 47999999999999999999998 8 899999999987654
No 270
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=96.90 E-value=0.003 Score=63.79 Aligned_cols=111 Identities=23% Similarity=0.231 Sum_probs=67.4
Q ss_pred HhhhHHHHhhccCCCCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHH
Q 019978 27 ERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRR 106 (333)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~ 106 (333)
+.+..+....+..... ++|.|+|+|.+|..+|..|.+. | ++|++++.+++.++++.
T Consensus 333 ~~l~~~~~~~~~~~~~-~~viIiG~G~~G~~la~~L~~~-g-----~~v~vid~d~~~~~~~~----------------- 388 (565)
T 4gx0_A 333 SQLAALEYLIGEAPED-ELIFIIGHGRIGCAAAAFLDRK-P-----VPFILIDRQESPVCNDH----------------- 388 (565)
T ss_dssp --------------CC-CCEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESSCCSSCCSS-----------------
T ss_pred HHHHHHHHHhcCCCCC-CCEEEECCCHHHHHHHHHHHHC-C-----CCEEEEECChHHHhhcC-----------------
Confidence 3455566666655544 8999999999999999999998 8 99999999998765321
Q ss_pred hhhcccccchhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHH-HhcCCCEEEEecCchhHHHHHHHHHhhhh
Q 019978 107 LIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQE-AVWDADIVINGLPSTETKEVFEEISRYWK 185 (333)
Q Consensus 107 ~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~e-a~~~aDlIIlaVps~~~~~vl~~i~~~l~ 185 (333)
.... ++.. . ...+++ -+++||.+|++++++...-.+..+++.+.
T Consensus 389 -----~~i~------gD~t---------------------~---~~~L~~agi~~ad~vi~~~~~d~~ni~~~~~ak~l~ 433 (565)
T 4gx0_A 389 -----VVVY------GDAT---------------------V---GQTLRQAGIDRASGIIVTTNDDSTNIFLTLACRHLH 433 (565)
T ss_dssp -----CEEE------SCSS---------------------S---STHHHHHTTTSCSEEEECCSCHHHHHHHHHHHHHHC
T ss_pred -----CEEE------eCCC---------------------C---HHHHHhcCccccCEEEEECCCchHHHHHHHHHHHHC
Confidence 0111 1100 0 011222 36799999999999876666666666666
Q ss_pred ccCCCCEEEEeeec
Q 019978 186 ERITVPVIISLAKG 199 (333)
Q Consensus 186 ~~~~~~~Ivs~~kG 199 (333)
+ +..++.-.+.
T Consensus 434 ~---~~~iiar~~~ 444 (565)
T 4gx0_A 434 S---HIRIVARANG 444 (565)
T ss_dssp S---SSEEEEEESS
T ss_pred C---CCEEEEEECC
Confidence 5 4466665543
No 271
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.88 E-value=0.0018 Score=64.59 Aligned_cols=38 Identities=11% Similarity=0.128 Sum_probs=32.9
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
+||.|+|+|.+|.+++..|++. + +++|++++|++++++
T Consensus 24 k~VlIiGAGgiG~aia~~L~~~-~----g~~V~v~~R~~~ka~ 61 (467)
T 2axq_A 24 KNVLLLGSGFVAQPVIDTLAAN-D----DINVTVACRTLANAQ 61 (467)
T ss_dssp EEEEEECCSTTHHHHHHHHHTS-T----TEEEEEEESSHHHHH
T ss_pred CEEEEECChHHHHHHHHHHHhC-C----CCeEEEEECCHHHHH
Confidence 6899999999999999999986 4 278999999987654
No 272
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=96.88 E-value=0.0032 Score=59.98 Aligned_cols=40 Identities=13% Similarity=0.309 Sum_probs=31.0
Q ss_pred CCceEEEEC-CCHHHHHHHHHHHHhcCCCCC--CeeEEEEecCC
Q 019978 42 DPLRIVGVG-AGAWGSVFTAMLQDSYGYLRD--KVLIRIWRRPG 82 (333)
Q Consensus 42 ~~~kI~IIG-aG~mG~alA~~La~~~G~~~~--~~~V~l~~r~~ 82 (333)
.++||+|+| +|.+|+.++..|+.. |.+.. ...+.++|+++
T Consensus 2 ~~~kV~V~GaaG~VG~~la~~L~~~-~~~~e~~~~~l~L~Di~~ 44 (333)
T 5mdh_A 2 EPIRVLVTGAAGQIAYSLLYSIGNG-SVFGKDQPIILVLLDITP 44 (333)
T ss_dssp CCEEEEESSTTSHHHHTTHHHHHTT-TTTCTTCCEEEEEECCGG
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhC-CCccccCCCEEEEEeCCC
Confidence 468999999 799999999999987 63210 02389999975
No 273
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=96.88 E-value=0.00087 Score=64.89 Aligned_cols=73 Identities=14% Similarity=0.177 Sum_probs=47.7
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEE-EEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
.+.||+|||+| ||...+..+.+. . ++.++. ++++++++++++. +. |
T Consensus 6 ~~~rv~VvG~G-~g~~h~~a~~~~-~---~~~elvav~~~~~~~a~~~a---------~~------------~------- 52 (372)
T 4gmf_A 6 PKQRVLIVGAK-FGEMYLNAFMQP-P---EGLELVGLLAQGSARSRELA---------HA------------F------- 52 (372)
T ss_dssp -CEEEEEECST-TTHHHHHTTSSC-C---TTEEEEEEECCSSHHHHHHH---------HH------------T-------
T ss_pred CCCEEEEEehH-HHHHHHHHHHhC-C---CCeEEEEEECCCHHHHHHHH---------HH------------h-------
Confidence 45799999999 898877776543 1 125644 7899887654321 00 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhH
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTET 173 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~ 173 (333)
++...+|.++.+++.|+++++||+...
T Consensus 53 --------------------------gv~~~~~~~~l~~~~D~v~i~~p~~~h 79 (372)
T 4gmf_A 53 --------------------------GIPLYTSPEQITGMPDIACIVVRSTVA 79 (372)
T ss_dssp --------------------------TCCEESSGGGCCSCCSEEEECCC--CT
T ss_pred --------------------------CCCEECCHHHHhcCCCEEEEECCCccc
Confidence 233457788888889999999997643
No 274
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=96.88 E-value=0.00096 Score=64.18 Aligned_cols=39 Identities=18% Similarity=0.305 Sum_probs=34.3
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
..++|+|+|+|.+|.+++..+... | .+|++++|++++++
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~-G-----a~V~~~d~~~~~~~ 203 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGM-G-----AQVTILDVNHKRLQ 203 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-C-----CEEEEEECCHHHHH
Confidence 348999999999999999999988 8 89999999986543
No 275
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=96.83 E-value=0.0038 Score=59.05 Aligned_cols=85 Identities=16% Similarity=0.106 Sum_probs=54.9
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCC---CCCCeeE-EEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhh
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGY---LRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~---~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (333)
.||+|||+|.||...+..+... .. +..+.+| -+++++++++++.. +. +.
T Consensus 7 lrvgiIG~G~ig~~h~~~~~~~-~~~~~~~~~~~l~av~d~~~~~a~~~a---------~~-------------~g---- 59 (390)
T 4h3v_A 7 LGIGLIGYAFMGAAHSQAWRSA-PRFFDLPLHPDLNVLCGRDAEAVRAAA---------GK-------------LG---- 59 (390)
T ss_dssp EEEEEECHHHHHHHHHHHHHHH-HHHSCCSSEEEEEEEECSSHHHHHHHH---------HH-------------HT----
T ss_pred CcEEEEcCCHHHHHHHHHHHhC-ccccccccCceEEEEEcCCHHHHHHHH---------HH-------------cC----
Confidence 4899999999999888877654 20 0111244 47788877654321 00 00
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHh
Q 019978 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISR 182 (333)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~--~aDlIIlaVps~~~~~vl~~i~~ 182 (333)
-..+.+|.++.+. +.|+|++|+|.....+++.....
T Consensus 60 ---------------------------~~~~~~d~~~ll~~~~iDaV~I~tP~~~H~~~~~~al~ 97 (390)
T 4h3v_A 60 ---------------------------WSTTETDWRTLLERDDVQLVDVCTPGDSHAEIAIAALE 97 (390)
T ss_dssp ---------------------------CSEEESCHHHHTTCTTCSEEEECSCGGGHHHHHHHHHH
T ss_pred ---------------------------CCcccCCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHH
Confidence 1135678888775 47999999999877766665443
No 276
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=96.78 E-value=0.0086 Score=55.99 Aligned_cols=94 Identities=17% Similarity=0.193 Sum_probs=68.4
Q ss_pred CCceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 42 ~~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
...+|+|+|+ |.||..++..+.+. | ++ .+|..++.... ...
T Consensus 12 ~~~~v~V~Gasg~~G~~~~~~l~~~-g-----~~-~V~~VnP~~~g-------------------------~~i------ 53 (294)
T 2yv1_A 12 ENTKAIVQGITGRQGSFHTKKMLEC-G-----TK-IVGGVTPGKGG-------------------------QNV------ 53 (294)
T ss_dssp TTCCEEEETTTSHHHHHHHHHHHHT-T-----CC-EEEEECTTCTT-------------------------CEE------
T ss_pred CCCEEEEECCCCCHHHHHHHHHHhC-C-----Ce-EEEEeCCCCCC-------------------------ceE------
Confidence 3458899998 99999999999887 7 66 56666664210 000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeee
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~--~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~k 198 (333)
..+.+..+++++.+ ++|++++++|+....+++++.... + -..+|.++.
T Consensus 54 -------------------------~G~~vy~sl~el~~~~~~Dv~ii~vp~~~~~~~v~ea~~~-G----i~~vVi~t~ 103 (294)
T 2yv1_A 54 -------------------------HGVPVFDTVKEAVKETDANASVIFVPAPFAKDAVFEAIDA-G----IELIVVITE 103 (294)
T ss_dssp -------------------------TTEEEESSHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHT-T----CSEEEECCS
T ss_pred -------------------------CCEeeeCCHHHHhhcCCCCEEEEccCHHHHHHHHHHHHHC-C----CCEEEEECC
Confidence 13556678888777 899999999999999999887753 1 234666788
Q ss_pred cCccc
Q 019978 199 GVEAE 203 (333)
Q Consensus 199 Gi~~~ 203 (333)
|+...
T Consensus 104 G~~~~ 108 (294)
T 2yv1_A 104 HIPVH 108 (294)
T ss_dssp CCCHH
T ss_pred CCCHH
Confidence 98753
No 277
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=96.77 E-value=0.0025 Score=60.96 Aligned_cols=32 Identities=13% Similarity=0.209 Sum_probs=23.6
Q ss_pred EecCHHHHhcC--CCEEEEecCchhHHHHHHHHH
Q 019978 150 VVTNLQEAVWD--ADIVINGLPSTETKEVFEEIS 181 (333)
Q Consensus 150 ~t~d~~ea~~~--aDlIIlaVps~~~~~vl~~i~ 181 (333)
+.+|+++.+.+ .|+|++|+|.....+++....
T Consensus 71 ~~~~~~~ll~~~~iD~V~i~tp~~~h~~~~~~al 104 (383)
T 3oqb_A 71 WTTDLDAALADKNDTMFFDAATTQARPGLLTQAI 104 (383)
T ss_dssp EESCHHHHHHCSSCCEEEECSCSSSSHHHHHHHH
T ss_pred ccCCHHHHhcCCCCCEEEECCCchHHHHHHHHHH
Confidence 45788887754 899999999876666555443
No 278
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=96.77 E-value=0.0015 Score=64.39 Aligned_cols=34 Identities=21% Similarity=0.210 Sum_probs=31.1
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
++|+|+|+|.+|..+|..+... | .+|+++++++.
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~-G-----a~Viv~D~dp~ 254 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAM-G-----SIVYVTEIDPI 254 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHH
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-C-----CEEEEEeCChh
Confidence 6999999999999999999877 8 89999999874
No 279
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=96.75 E-value=0.0022 Score=62.78 Aligned_cols=40 Identities=18% Similarity=0.175 Sum_probs=34.8
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (333)
...||+|+|+|.+|...+..+..- | .+|++|++++++++.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l-G-----a~V~v~D~~~~~l~~ 228 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL-G-----AVVSATDVRPAAKEQ 228 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSTTHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC-C-----CEEEEEcCCHHHHHH
Confidence 357999999999999999999887 8 899999999976543
No 280
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.71 E-value=0.0037 Score=59.43 Aligned_cols=104 Identities=18% Similarity=0.160 Sum_probs=60.5
Q ss_pred CceEEEECCCHHHHHHHHHHHHh--------cCCCCCCeeEE-EEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDS--------YGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAY 113 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~--------~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~ 113 (333)
|+||+|||+|.||+.++..+.++ .+ .+|. +++++++..+++. +.++.... +
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~-----~~lvaV~d~~~~~~~~id---~~~~~~~~------------~ 61 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGE-----FKVTAVADSKSSISGDFS---LVEALRMK------------R 61 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCC-----EEEEEEECSSCEEESSCC---HHHHHHHH------------H
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCC-----EEEEEEEeCChHhccccC---HHHHHhhh------------c
Confidence 68999999999999999998764 12 5544 6677766543211 00011100 0
Q ss_pred cchhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhH-HHHHHHHHhhhhccCCC
Q 019978 114 LKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTET-KEVFEEISRYWKERITV 190 (333)
Q Consensus 114 l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~--~aDlIIlaVps~~~-~~vl~~i~~~l~~~~~~ 190 (333)
+. ..+....|+++.++ +.|+|+.|+|+... .+..+.+...+.. +
T Consensus 62 -~~-----------------------------~~~~~~~d~~~ll~~~~iDvVv~~tp~~~h~~~a~~~~~~aL~a---G 108 (327)
T 3do5_A 62 -ET-----------------------------GMLRDDAKAIEVVRSADYDVLIEASVTRVDGGEGVNYIREALKR---G 108 (327)
T ss_dssp -HH-----------------------------SSCSBCCCHHHHHHHSCCSEEEECCCCC----CHHHHHHHHHTT---T
T ss_pred -cC-----------------------------ccccCCCCHHHHhcCCCCCEEEECCCCcccchhHHHHHHHHHHC---C
Confidence 00 01110237777664 58999999998742 1244444555555 6
Q ss_pred CEEEEeeec
Q 019978 191 PVIISLAKG 199 (333)
Q Consensus 191 ~~Ivs~~kG 199 (333)
+.|++..|+
T Consensus 109 khVv~~NKk 117 (327)
T 3do5_A 109 KHVVTSNKG 117 (327)
T ss_dssp CEEEECCSH
T ss_pred CeEEecCch
Confidence 778877665
No 281
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.70 E-value=0.002 Score=62.78 Aligned_cols=42 Identities=17% Similarity=0.203 Sum_probs=33.7
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (333)
|+||+|+|+|.+|..++..|++. |.+. .+|.+++|+.+++++
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~-g~~~--~~V~v~~r~~~~~~~ 42 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMN-REVF--SHITLASRTLSKCQE 42 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTC-TTTC--CEEEEEESCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCCc--eEEEEEECCHHHHHH
Confidence 47999999999999999999988 6100 289999999876654
No 282
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=96.69 E-value=0.0042 Score=54.19 Aligned_cols=38 Identities=24% Similarity=0.309 Sum_probs=32.7
Q ss_pred Cce-EEEECC-CHHHHHHHHHHH-HhcCCCCCCeeEEEEecCCc-chh
Q 019978 43 PLR-IVGVGA-GAWGSVFTAMLQ-DSYGYLRDKVLIRIWRRPGR-SVD 86 (333)
Q Consensus 43 ~~k-I~IIGa-G~mG~alA~~La-~~~G~~~~~~~V~l~~r~~~-~~~ 86 (333)
||| |.|.|+ |.+|.+++..|+ +. | ++|++++|+++ .++
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~-g-----~~V~~~~r~~~~~~~ 45 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYT-D-----MHITLYGRQLKTRIP 45 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHC-C-----CEEEEEESSHHHHSC
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcC-C-----ceEEEEecCccccch
Confidence 355 999995 999999999999 77 7 99999999986 554
No 283
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=96.65 E-value=0.0088 Score=57.11 Aligned_cols=42 Identities=12% Similarity=0.146 Sum_probs=31.1
Q ss_pred CHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecC
Q 019978 153 NLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (333)
Q Consensus 153 d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi 200 (333)
+.++...++|+||+|+|...-.+++.++.. . ++.+|.++.-+
T Consensus 68 ~~~~~~~~~Dvvf~a~p~~~s~~~~~~~~~---~---g~~vIDlSa~f 109 (337)
T 3dr3_A 68 DISEFSPGVDVVFLATAHEVSHDLAPQFLE---A---GCVVFDLSGAF 109 (337)
T ss_dssp SGGGTCTTCSEEEECSCHHHHHHHHHHHHH---T---TCEEEECSSTT
T ss_pred CHHHHhcCCCEEEECCChHHHHHHHHHHHH---C---CCEEEEcCCcc
Confidence 444433789999999999988888877643 3 67888877654
No 284
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=96.64 E-value=0.015 Score=53.00 Aligned_cols=63 Identities=19% Similarity=0.083 Sum_probs=36.9
Q ss_pred CCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchH
Q 019978 160 DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIAS 238 (333)
Q Consensus 160 ~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~ 238 (333)
++|+||-++++..+.+.++.... . +..+|..+.|+..+. .+.+.+..... ....++..||+..
T Consensus 45 ~~DvvIDfT~p~a~~~~~~~a~~---~---g~~~VigTTG~~~e~---------~~~l~~aa~~~-~~~~vv~a~N~si 107 (245)
T 1p9l_A 45 NTEVVIDFTHPDVVMGNLEFLID---N---GIHAVVGTTGFTAER---------FQQVESWLVAK-PNTSVLIAPNFAI 107 (245)
T ss_dssp TCCEEEECSCTTTHHHHHHHHHH---T---TCEEEECCCCCCHHH---------HHHHHHHHHTS-TTCEEEECSCCCH
T ss_pred CCcEEEEccChHHHHHHHHHHHH---c---CCCEEEcCCCCCHHH---------HHHHHHHHHhC-CCCCEEEECCccH
Confidence 68999978877777666665443 2 456666666876542 12344433110 1244678888764
No 285
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=96.61 E-value=0.0091 Score=56.66 Aligned_cols=37 Identities=11% Similarity=0.098 Sum_probs=28.1
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeE-EEEecCCcch
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSV 85 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V-~l~~r~~~~~ 85 (333)
+||+|+|+|.||..++..|... . +.++ -+.+++++.+
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~-~----~~elvav~d~~~~~~ 40 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQ-D----DMELIGITKTKPDFE 40 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-T----TEEEEEEEESSCSHH
T ss_pred cEEEEEeEhHHHHHHHHHHhcC-C----CCEEEEEEcCCHHHH
Confidence 6999999999999999999765 3 1554 4567765543
No 286
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=96.52 E-value=0.014 Score=54.97 Aligned_cols=39 Identities=13% Similarity=0.110 Sum_probs=29.1
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCee-EEEEecCCcc
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRS 84 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~-V~l~~r~~~~ 84 (333)
.++||+|||+|.+|..++..+.++.. +.+ |.++++++++
T Consensus 3 ~~irVaIIG~G~iG~~~~~~l~~~~~----~~elvav~d~~~~~ 42 (312)
T 1nvm_B 3 QKLKVAIIGSGNIGTDLMIKVLRNAK----YLEMGAMVGIDAAS 42 (312)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHCS----SEEEEEEECSCTTC
T ss_pred CCCEEEEEcCcHHHHHHHHHHHhhCc----CeEEEEEEeCChhh
Confidence 35799999999999999999976311 144 4467888765
No 287
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=96.52 E-value=0.0036 Score=58.22 Aligned_cols=65 Identities=20% Similarity=0.104 Sum_probs=45.1
Q ss_pred cccccccccchHHhhhHHHHhhccCCCCCceEEEECCCHHHHHHHHHHHHhcCCCCCCe-eEEEEecCCcchhh
Q 019978 15 NGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDR 87 (333)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~-~V~l~~r~~~~~~~ 87 (333)
+|-++-.|-.-.-=+.++++. +.. -..+++.|+|+|.+|.+++..|++. | . +|++|+|+++++++
T Consensus 100 ~g~l~G~NTD~~G~~~~L~~~-~~~-l~~k~vlvlGaGg~g~aia~~L~~~-G-----~~~v~v~~R~~~~a~~ 165 (281)
T 3o8q_A 100 DGEILGDNTDGEGLVQDLLAQ-QVL-LKGATILLIGAGGAARGVLKPLLDQ-Q-----PASITVTNRTFAKAEQ 165 (281)
T ss_dssp TSCEEEECCHHHHHHHHHHHT-TCC-CTTCEEEEECCSHHHHHHHHHHHTT-C-----CSEEEEEESSHHHHHH
T ss_pred CCcEEEEecHHHHHHHHHHHh-CCC-ccCCEEEEECchHHHHHHHHHHHhc-C-----CCeEEEEECCHHHHHH
Confidence 454444554443334445432 322 2347999999999999999999998 7 5 89999999876553
No 288
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.52 E-value=0.0028 Score=59.14 Aligned_cols=64 Identities=16% Similarity=0.002 Sum_probs=43.7
Q ss_pred cccccccccchHHhhhHHHHhhccCCCCCceEEEECCCHHHHHHHHHHHHhcCCCCCCe-eEEEEecCCcchh
Q 019978 15 NGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVD 86 (333)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~-~V~l~~r~~~~~~ 86 (333)
+|-++-.|-.-.-=+..+++. +.. ...+++.|+|+|.+|.+++..|++. | . +|++++|+.++++
T Consensus 96 ~g~l~G~NTD~~G~~~~L~~~-~~~-~~~k~vlvlGaGGaaraia~~L~~~-G-----~~~v~v~nRt~~ka~ 160 (282)
T 3fbt_A 96 REGISGFNTDYIGFGKMLSKF-RVE-IKNNICVVLGSGGAARAVLQYLKDN-F-----AKDIYVVTRNPEKTS 160 (282)
T ss_dssp SSCEEEECCHHHHHHHHHHHT-TCC-CTTSEEEEECSSTTHHHHHHHHHHT-T-----CSEEEEEESCHHHHH
T ss_pred CCEEEeeCCcHHHHHHHHHHc-CCC-ccCCEEEEECCcHHHHHHHHHHHHc-C-----CCEEEEEeCCHHHHH
Confidence 344444454433334444431 221 2346999999999999999999998 8 6 8999999987654
No 289
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=96.49 E-value=0.012 Score=54.44 Aligned_cols=23 Identities=39% Similarity=0.443 Sum_probs=20.2
Q ss_pred CCceEEEECCCHHHHHHHHHHHH
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQD 64 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~ 64 (333)
.++||+|||+|.||...+..+..
T Consensus 6 ~~~rvgiIG~G~iG~~~~~~l~~ 28 (294)
T 1lc0_A 6 GKFGVVVVGVGRAGSVRLRDLKD 28 (294)
T ss_dssp CSEEEEEECCSHHHHHHHHHHTS
T ss_pred CcceEEEEEEcHHHHHHHHHHhc
Confidence 46899999999999999888765
No 290
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=96.45 E-value=0.0053 Score=57.79 Aligned_cols=84 Identities=17% Similarity=0.114 Sum_probs=54.3
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEE-EEecCC-cchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPG-RSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~-l~~r~~-~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (333)
++||+|||+|.+|...+..+ .. + .+|. ++++++ +.+++... ...+ + +
T Consensus 2 ~~rvgiiG~G~~~~~~~~~l-~~-~-----~~lvav~d~~~~~~~~~~~~-----~~~~-------------~--~---- 50 (337)
T 3ip3_A 2 SLKICVIGSSGHFRYALEGL-DE-E-----CSITGIAPGVPEEDLSKLEK-----AISE-------------M--N---- 50 (337)
T ss_dssp CEEEEEECSSSCHHHHHTTC-CT-T-----EEEEEEECSSTTCCCHHHHH-----HHHT-------------T--T----
T ss_pred ceEEEEEccchhHHHHHHhc-CC-C-----cEEEEEecCCchhhHHHHHH-----HHHH-------------c--C----
Confidence 47999999999888776666 33 3 6755 688887 44432210 0000 0 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHh
Q 019978 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISR 182 (333)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~--~aDlIIlaVps~~~~~vl~~i~~ 182 (333)
+ ...+.+|.++.+. +.|+|++|+|.....+++.....
T Consensus 51 -----~--------------------~~~~~~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~ 89 (337)
T 3ip3_A 51 -----I--------------------KPKKYNNWWEMLEKEKPDILVINTVFSLNGKILLEALE 89 (337)
T ss_dssp -----C--------------------CCEECSSHHHHHHHHCCSEEEECSSHHHHHHHHHHHHH
T ss_pred -----C--------------------CCcccCCHHHHhcCCCCCEEEEeCCcchHHHHHHHHHH
Confidence 0 1345688888776 48999999999877776665543
No 291
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=96.42 E-value=0.0022 Score=60.37 Aligned_cols=37 Identities=14% Similarity=-0.031 Sum_probs=32.5
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
.++|.|+|+|.+|..++..|.+. | + |++++++++.++
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~-g-----~-v~vid~~~~~~~ 151 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGS-E-----V-FVLAEDENVRKK 151 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGS-C-----E-EEEESCGGGHHH
T ss_pred cCCEEEECCcHHHHHHHHHHHhC-C-----c-EEEEeCChhhhh
Confidence 46899999999999999999888 7 9 999999987654
No 292
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=96.38 E-value=0.017 Score=55.07 Aligned_cols=98 Identities=10% Similarity=0.125 Sum_probs=56.7
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEE-EEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (333)
++||+|+|+|.||..++..|.+. . +.+|. +.+++++...+. ..... .+.+...
T Consensus 1 ~ikVgIiGaG~iG~~~~r~L~~~-p----~~elvav~d~~~~~~~~~--------a~~~g--------~~~~~~~----- 54 (340)
T 1b7g_O 1 MVNVAVNGYGTIGKRVADAIIKQ-P----DMKLVGVAKTSPNYEAFI--------AHRRG--------IRIYVPQ----- 54 (340)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC-T----TEEEEEEECSSCSHHHHH--------HHHTT--------CCEECCG-----
T ss_pred CeEEEEEecCHHHHHHHHHHHcC-C----CCEEEEEEcCChHHHHHH--------HHhcC--------cceecCc-----
Confidence 36999999999999999999865 3 14544 556554332211 00000 0001000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHh
Q 019978 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISR 182 (333)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~ 182 (333)
.|++++.+ ..+.+..+.++...++|+|++|+|.....+..+....
T Consensus 55 -----~~~~~~~~-----------~~v~v~~~~e~l~~~vDvV~~aTp~~~s~~~a~~~~~ 99 (340)
T 1b7g_O 55 -----QSIKKFEE-----------SGIPVAGTVEDLIKTSDIVVDTTPNGVGAQYKPIYLQ 99 (340)
T ss_dssp -----GGHHHHHT-----------TTCCCCCCHHHHHHHCSEEEECCSTTHHHHHHHHHHH
T ss_pred -----CHHHHhcc-----------cccccccCHhHhhcCCCEEEECCCCchhHHHHHHHHH
Confidence 01111111 1344556777766789999999999987777765543
No 293
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=96.38 E-value=0.0031 Score=59.41 Aligned_cols=35 Identities=23% Similarity=0.456 Sum_probs=32.4
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
.|||+|||+|.-|.++|..|++. | ++|++++++++
T Consensus 1 sm~V~IVGaGpaGl~~A~~L~~~-G-----~~v~v~Er~~~ 35 (412)
T 4hb9_A 1 SMHVGIIGAGIGGTCLAHGLRKH-G-----IKVTIYERNSA 35 (412)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCS
T ss_pred CCEEEEECcCHHHHHHHHHHHhC-C-----CCEEEEecCCC
Confidence 38999999999999999999999 8 99999998764
No 294
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=96.36 E-value=0.0031 Score=61.52 Aligned_cols=38 Identities=18% Similarity=0.375 Sum_probs=33.5
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
..+|+|+|+|.+|...+..+..- | .+|+++++++++.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~-G-----a~V~v~D~~~~~~~ 209 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSL-G-----AIVRAFDTRPEVKE 209 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCGGGHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-C-----CEEEEEcCCHHHHH
Confidence 46999999999999999998877 8 89999999987654
No 295
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.33 E-value=0.0091 Score=51.96 Aligned_cols=38 Identities=24% Similarity=0.261 Sum_probs=34.1
Q ss_pred CCceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcch
Q 019978 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (333)
Q Consensus 42 ~~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (333)
.+|||.|.|+ |.+|..++..|.+. | ++|++.+|+++..
T Consensus 3 ~m~~ilItGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~~~ 41 (227)
T 3dhn_A 3 KVKKIVLIGASGFVGSALLNEALNR-G-----FEVTAVVRHPEKI 41 (227)
T ss_dssp CCCEEEEETCCHHHHHHHHHHHHTT-T-----CEEEEECSCGGGC
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHC-C-----CEEEEEEcCcccc
Confidence 3689999996 99999999999999 8 9999999998654
No 296
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=96.27 E-value=0.0097 Score=52.62 Aligned_cols=39 Identities=15% Similarity=0.227 Sum_probs=33.2
Q ss_pred CceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 43 ~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
+|+|.|.|+ |.+|.+++..|++. | .++|++++|+++.++
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~-G----~~~V~~~~R~~~~~~ 62 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADK-Q----TIKQTLFARQPAKIH 62 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTC-T----TEEEEEEESSGGGSC
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhC-C----CceEEEEEcChhhhc
Confidence 478999995 99999999999988 6 169999999987543
No 297
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=96.26 E-value=0.0038 Score=61.75 Aligned_cols=38 Identities=21% Similarity=0.242 Sum_probs=33.5
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
+++|.|+|+|.+|.+++..|++. | ++|++++|++++++
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~-G-----~~V~v~~R~~~~a~ 40 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDS-G-----IKVTVACRTLESAK 40 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTT-T-----CEEEEEESSHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-c-----CEEEEEECCHHHHH
Confidence 36899999999999999999988 8 89999999876543
No 298
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=96.26 E-value=0.016 Score=54.46 Aligned_cols=33 Identities=21% Similarity=0.396 Sum_probs=28.3
Q ss_pred ceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEec
Q 019978 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRR 80 (333)
Q Consensus 44 ~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r 80 (333)
|||+|+|+ |.+|+.++..|+.. |.. .++.++++
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~-~~~---~el~L~Di 34 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKE-PFM---KDLVLIGR 34 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTC-TTC---CEEEEEEC
T ss_pred CEEEEECCCChhHHHHHHHHHhC-CCC---CEEEEEcC
Confidence 69999999 99999999999887 621 36899998
No 299
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=96.26 E-value=0.042 Score=49.94 Aligned_cols=34 Identities=15% Similarity=0.223 Sum_probs=30.1
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
.||.|+|+|.+|+.++..|+.. |. .+++++|.+.
T Consensus 29 ~~VlvvG~GglG~~va~~La~~-Gv----g~i~lvD~d~ 62 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGA-GV----GTLVLADDDD 62 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-TC----SEEEEECCCB
T ss_pred CcEEEEccCHHHHHHHHHHHHc-CC----CeEEEEeCCC
Confidence 6999999999999999999999 82 3789998875
No 300
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=96.24 E-value=0.014 Score=55.56 Aligned_cols=36 Identities=8% Similarity=0.084 Sum_probs=26.9
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEE-EEecCCc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGR 83 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~-l~~r~~~ 83 (333)
|+||+|+|+|.+|..++..|.+. . +.++. +.+++++
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~-~----~~elvav~d~~~~ 37 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQ-D----DMKVIGVSKTRPD 37 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTS-S----SEEEEEEEESSCS
T ss_pred CeEEEEEeECHHHHHHHHHHHcC-C----CcEEEEEEcCChh
Confidence 46999999999999999999875 2 15543 4566543
No 301
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=96.14 E-value=0.018 Score=55.95 Aligned_cols=36 Identities=25% Similarity=0.246 Sum_probs=31.7
Q ss_pred CCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 019978 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (333)
Q Consensus 41 ~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~ 81 (333)
-...||.|+|+|.+|.++|..|... |. .+|+++||+
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~-G~----~~I~v~Dr~ 225 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDL-GV----KNVVAVDRK 225 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHH-TC----CEEEEEETT
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhC-CC----CeEEEEECC
Confidence 3457999999999999999999998 82 389999998
No 302
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.13 E-value=0.011 Score=58.49 Aligned_cols=54 Identities=17% Similarity=0.294 Sum_probs=44.6
Q ss_pred HhhhHHHHhhccCCCCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhh
Q 019978 27 ERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (333)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (333)
+.+..+...+|..+....+|.|+|+|.+|..+|..|.+. ++|.+..+++++++.
T Consensus 219 ~~i~~~~~~~g~~~~~~~~v~I~GgG~ig~~lA~~L~~~-------~~v~iIE~d~~r~~~ 272 (461)
T 4g65_A 219 NHIRSVMSELQRLEKPYRRIMIVGGGNIGASLAKRLEQT-------YSVKLIERNLQRAEK 272 (461)
T ss_dssp TTHHHHHHHTTGGGSCCCEEEEECCSHHHHHHHHHHTTT-------SEEEEEESCHHHHHH
T ss_pred chHHHHHHhhccccccccEEEEEcchHHHHHHHHHhhhc-------CceEEEecCHHHHHH
Confidence 345566667777777788999999999999999998554 899999999987754
No 303
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.12 E-value=0.0092 Score=52.52 Aligned_cols=37 Identities=22% Similarity=0.226 Sum_probs=33.9
Q ss_pred ceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 44 ~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
|+|.|.|+ |.+|.+++..|++. | ++|++.+|+++..+
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~-G-----~~V~~~~R~~~~~~ 59 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNK-G-----HEPVAMVRNEEQGP 59 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESSGGGHH
T ss_pred CeEEEECCCChHHHHHHHHHHhC-C-----CeEEEEECChHHHH
Confidence 79999998 99999999999999 8 99999999987654
No 304
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=96.10 E-value=0.011 Score=54.65 Aligned_cols=39 Identities=18% Similarity=0.035 Sum_probs=34.4
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCe-eEEEEecCCcchhh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDR 87 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~-~V~l~~r~~~~~~~ 87 (333)
.+++.|+|+|.+|.+++..|++. | . +|++++|+.+++++
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~-G-----~~~v~i~~R~~~~a~~ 159 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQA-G-----PSELVIANRDMAKALA 159 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT-C-----CSEEEEECSCHHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHHc-C-----CCEEEEEeCCHHHHHH
Confidence 47999999999999999999998 8 5 89999999876553
No 305
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=96.09 E-value=0.0077 Score=58.14 Aligned_cols=39 Identities=18% Similarity=0.228 Sum_probs=33.8
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
...+|+|+|+|.+|...+..+... | .+|+++++++++.+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~-G-----a~V~~~d~~~~~~~ 209 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRL-G-----AVVMATDVRAATKE 209 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCSTTHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHH
Confidence 357999999999999999998877 8 78999999987654
No 306
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=96.08 E-value=0.0065 Score=55.81 Aligned_cols=65 Identities=15% Similarity=0.074 Sum_probs=45.3
Q ss_pred cccccccccchHHhhhHHHHhhccCCCCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhh
Q 019978 15 NGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (333)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (333)
+|-+.-.|-.-.-=+..+++ .+. .-..++|.|+|+|.+|.+++..|++. | .+|++|+|+.+++++
T Consensus 93 ~g~l~g~NTD~~G~~~~L~~-~~~-~~~~~~vlvlGaGg~g~a~a~~L~~~-G-----~~v~v~~R~~~~a~~ 157 (272)
T 1p77_A 93 DGKLYADNTDGIGLVTDLQR-LNW-LRPNQHVLILGAGGATKGVLLPLLQA-Q-----QNIVLANRTFSKTKE 157 (272)
T ss_dssp TSCEEEECCHHHHHHHHHHH-TTC-CCTTCEEEEECCSHHHHTTHHHHHHT-T-----CEEEEEESSHHHHHH
T ss_pred CCEEEEecCCHHHHHHHHHH-hCC-CcCCCEEEEECCcHHHHHHHHHHHHC-C-----CEEEEEECCHHHHHH
Confidence 34333444444444445544 232 22347999999999999999999999 8 899999999876543
No 307
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=96.07 E-value=0.0056 Score=58.61 Aligned_cols=39 Identities=21% Similarity=0.307 Sum_probs=34.4
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (333)
..+|.|+|+|.+|.+.+..+... | .+|++++|++++++.
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~-G-----a~V~v~dr~~~r~~~ 205 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGL-G-----AQVQIFDINVERLSY 205 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CEEEEEeCCHHHHHH
Confidence 47999999999999999999888 8 899999999876543
No 308
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=96.03 E-value=0.0058 Score=51.89 Aligned_cols=33 Identities=18% Similarity=0.313 Sum_probs=30.6
Q ss_pred eEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 45 RIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 45 kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
.|+|||||.-|.+.|..|++. | ++|+++++.+.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~-G-----~~V~v~Ek~~~ 36 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAA-G-----HQVHLFDKSRG 36 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHC-C-----CCEEEEECCCC
Confidence 599999999999999999999 8 99999998753
No 309
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=96.03 E-value=0.011 Score=55.80 Aligned_cols=34 Identities=24% Similarity=0.281 Sum_probs=31.0
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCe-eEEEEecCC
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPG 82 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~-~V~l~~r~~ 82 (333)
-+++.|+|+|.+|.+++..|++. | . +|++++|++
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~-G-----a~~V~i~nR~~ 188 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALD-G-----VKEISIFNRKD 188 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT-T-----CSEEEEEECSS
T ss_pred CCEEEEECCChHHHHHHHHHHHC-C-----CCEEEEEECCC
Confidence 36999999999999999999998 8 6 899999993
No 310
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=96.01 E-value=0.044 Score=52.40 Aligned_cols=34 Identities=21% Similarity=0.242 Sum_probs=30.4
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
.||.|||+|..|+.+|..|+.. |. -+++++|++.
T Consensus 35 ~~VlIvGaGGlGs~va~~La~a-GV----g~ItlvD~D~ 68 (340)
T 3rui_A 35 TKVLLLGAGTLGCYVSRALIAW-GV----RKITFVDNGT 68 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TC----CEEEEECCCB
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CC----CEEEEecCCE
Confidence 6999999999999999999999 82 4789998875
No 311
>3h2z_A Mannitol-1-phosphate 5-dehydrogenase; PSI- protein structure initiative, structural genomics, midwest for structural genomics (MCSG); 1.90A {Shigella flexneri 2a str}
Probab=95.98 E-value=0.005 Score=59.84 Aligned_cols=117 Identities=18% Similarity=0.267 Sum_probs=71.5
Q ss_pred ceEEEECCCHHHHHHHH-HHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhhhhc
Q 019978 44 LRIVGVGAGAWGSVFTA-MLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~-~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (333)
||+..+|+|++|.++-. .|.++ | ++|++.++++..+++++.++ .|.-.+.+
T Consensus 1 mkavhfGaGniGRGfig~~l~~~-g-----~~v~f~dv~~~~i~~Ln~~~-------------------~Y~V~~~g--- 52 (382)
T 3h2z_A 1 MKALHFGAGNIGRGFIGKLLADA-G-----IQLTFADVNQVVLDALNARH-------------------SYQVHVVG--- 52 (382)
T ss_dssp CEEEEECCSHHHHHTHHHHHHHT-T-----CEEEEEESCHHHHHHHHHHS-------------------EEEEEEES---
T ss_pred CcEEEECCCccchhhHHHHHHHc-C-----CeEEEEeCCHHHHHHHhcCC-------------------CEEEEEcc---
Confidence 79999999999966555 56666 7 89999999998777655432 23221100
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEe-c---CHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhcc----C-CCCEE
Q 019978 123 DRTLHADEILKDGFCLNMIDTPLCPLKVV-T---NLQEAVWDADIVINGLPSTETKEVFEEISRYWKER----I-TVPVI 193 (333)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t-~---d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~----~-~~~~I 193 (333)
... .. ....+++.. + +.-+++.++|+|..++.+...+.+...|...+..+ . +.-.|
T Consensus 53 ~~~--------~~-------~~v~~v~ai~s~~~~~~~~i~~adlitT~vG~~~l~~i~~~l~~~L~~R~~~~~~~plti 117 (382)
T 3h2z_A 53 ETE--------QV-------DTVSGVNAVSSIGDDVVDLIAQVDLVTTAVGPVVLERIAPAIAKGLVKRKEQGNESPLNI 117 (382)
T ss_dssp SSE--------EE-------EEEESCEEEETTSSHHHHHHTTCSEEEECCCHHHHHHTHHHHHHHHHHHHHHTCCSCEEE
T ss_pred CCc--------ce-------EEEEEEEEEeCcHHHHHHHHcCCCEEEECCCcccHHHHHHHHHHHHHHHHHcCCCCCcEE
Confidence 000 00 000133331 1 23345679999999999888888877777655321 1 13357
Q ss_pred EEeeecCccc
Q 019978 194 ISLAKGVEAE 203 (333)
Q Consensus 194 vs~~kGi~~~ 203 (333)
++|-|-...+
T Consensus 118 lsCeN~~~ng 127 (382)
T 3h2z_A 118 IACENMVRGT 127 (382)
T ss_dssp EECCSSTTHH
T ss_pred EECCCccchH
Confidence 7887765543
No 312
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=95.97 E-value=0.029 Score=53.15 Aligned_cols=43 Identities=12% Similarity=0.063 Sum_probs=29.4
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCC---CCCCeeE-EEEecCCcchh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGY---LRDKVLI-RIWRRPGRSVD 86 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~---~~~~~~V-~l~~r~~~~~~ 86 (333)
++||+|||+|.||+.++..+.++ .. +-.+.+| -++++++++++
T Consensus 6 ~irvgIiG~G~VG~~~~~~l~~~-~~~~~~g~~~~vvaV~d~~~~~~~ 52 (331)
T 3c8m_A 6 TINLSIFGLGNVGLNLLRIIRSF-NEENRLGLKFNVVFVADSLHSYYN 52 (331)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH-HHHCSSSEEEEEEEEECSSCEEEC
T ss_pred EEeEEEEecCHHHHHHHHHHHhC-hHHHhcCCcEEEEEEEECChHHhh
Confidence 47999999999999999998765 10 0000343 46778776554
No 313
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=95.94 E-value=0.024 Score=54.21 Aligned_cols=41 Identities=32% Similarity=0.421 Sum_probs=29.4
Q ss_pred CHHHHhc-CCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeec
Q 019978 153 NLQEAVW-DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 153 d~~ea~~-~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kG 199 (333)
++++.++ ++|+||+|+|.....+.+..+.. . ++.||+++.-
T Consensus 75 ~~~~~~~~~~DvV~~atp~~~~~~~a~~~~~---a---G~~VId~s~~ 116 (354)
T 1ys4_A 75 DPKHEEFEDVDIVFSALPSDLAKKFEPEFAK---E---GKLIFSNASA 116 (354)
T ss_dssp CTTSGGGTTCCEEEECCCHHHHHHHHHHHHH---T---TCEEEECCST
T ss_pred CHHHHhcCCCCEEEECCCchHHHHHHHHHHH---C---CCEEEECCch
Confidence 4444445 89999999999988777776643 3 5678887643
No 314
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=95.91 E-value=0.018 Score=55.58 Aligned_cols=44 Identities=16% Similarity=0.188 Sum_probs=35.9
Q ss_pred hccCCCCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcch
Q 019978 36 MGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (333)
Q Consensus 36 ~~~~~~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (333)
.|..+-.-++|+|+|+|+||..+|..|... | .+|+++|++++.+
T Consensus 166 ~G~~~L~GktV~V~G~G~VG~~~A~~L~~~-G-----akVvv~D~~~~~l 209 (364)
T 1leh_A 166 FGSDSLEGLAVSVQGLGNVAKALCKKLNTE-G-----AKLVVTDVNKAAV 209 (364)
T ss_dssp HSSCCCTTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHH
T ss_pred ccccCCCcCEEEEECchHHHHHHHHHHHHC-C-----CEEEEEcCCHHHH
Confidence 454233347999999999999999999998 8 8999999887544
No 315
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.86 E-value=0.0078 Score=54.52 Aligned_cols=36 Identities=22% Similarity=0.288 Sum_probs=33.1
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (333)
+|||.|.|+|.+|+.++..|.+. | ++|+..+|+++.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~-g-----~~V~~~~r~~~~ 38 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQ-G-----HEVTGLRRSAQP 38 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECTTSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHC-C-----CEEEEEeCCccc
Confidence 47999999999999999999999 8 999999998764
No 316
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=95.83 E-value=0.013 Score=53.74 Aligned_cols=65 Identities=22% Similarity=0.195 Sum_probs=44.6
Q ss_pred cccccccccchHHhhhHHHHhhccCCCCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhh
Q 019978 15 NGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (333)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (333)
+|-++-.|-.-.-=+..+++ .+.. -..+++.|+|+|.+|.+++..|++. | .+|++|+|+++++++
T Consensus 93 ~g~l~G~ntD~~G~~~~L~~-~~~~-l~~k~vlViGaGg~g~a~a~~L~~~-G-----~~V~v~~R~~~~~~~ 157 (271)
T 1nyt_A 93 DGRLLGDNTDGVGLLSDLER-LSFI-RPGLRILLIGAGGASRGVLLPLLSL-D-----CAVTITNRTVSRAEE 157 (271)
T ss_dssp TSCEEEECCHHHHHHHHHHH-HTCC-CTTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSHHHHHH
T ss_pred CCeEEEeCCCHHHHHHHHHh-cCcC-cCCCEEEEECCcHHHHHHHHHHHHc-C-----CEEEEEECCHHHHHH
Confidence 34334444433333444444 2322 2336999999999999999999999 8 899999999876543
No 317
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=95.82 E-value=0.032 Score=53.24 Aligned_cols=37 Identities=27% Similarity=0.410 Sum_probs=27.7
Q ss_pred hcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecC
Q 019978 158 VWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (333)
Q Consensus 158 ~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi 200 (333)
+.++|+||+|+|.....+.+..+. .. ++.+|+++.-+
T Consensus 66 ~~~vDvV~~a~g~~~s~~~a~~~~---~a---G~~VId~Sa~~ 102 (345)
T 2ozp_A 66 LEPADILVLALPHGVFAREFDRYS---AL---APVLVDLSADF 102 (345)
T ss_dssp CCCCSEEEECCCTTHHHHTHHHHH---TT---CSEEEECSSTT
T ss_pred hcCCCEEEEcCCcHHHHHHHHHHH---HC---CCEEEEcCccc
Confidence 578999999999998777776654 33 56788776544
No 318
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=95.82 E-value=0.017 Score=55.49 Aligned_cols=33 Identities=18% Similarity=0.302 Sum_probs=26.0
Q ss_pred ceEEEEC-CCHHHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 019978 44 LRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (333)
Q Consensus 44 ~kI~IIG-aG~mG~alA~~La~~~G~~~~~~~V~l~~r~ 81 (333)
+||+|+| .|.+|..+...|.+. . ..+++.+...
T Consensus 17 ~kV~IiGAtG~iG~~llr~L~~~-p----~~elvai~~~ 50 (359)
T 1xyg_A 17 IRIGLLGASGYTGAEIVRLLANH-P----HFQVTLMTAD 50 (359)
T ss_dssp EEEEEECCSSHHHHHHHHHHHTC-S----SEEEEEEBCS
T ss_pred cEEEEECcCCHHHHHHHHHHHcC-C----CcEEEEEeCc
Confidence 6999999 699999999999876 4 1466655543
No 319
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=95.81 E-value=0.02 Score=53.73 Aligned_cols=39 Identities=23% Similarity=0.440 Sum_probs=31.2
Q ss_pred CCceEEEECC-CHHHHHHHHHHHHhcCCC---CCCeeEEEEecCC
Q 019978 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYL---RDKVLIRIWRRPG 82 (333)
Q Consensus 42 ~~~kI~IIGa-G~mG~alA~~La~~~G~~---~~~~~V~l~~r~~ 82 (333)
.+|||+|+|+ |.+|+.++..|... |++ .. ++|+++++++
T Consensus 3 ~~mkVlVtGaaGfIG~~l~~~L~~~-g~~~~~~~-~ev~l~D~~~ 45 (327)
T 1y7t_A 3 APVRVAVTGAAGQIGYSLLFRIAAG-EMLGKDQP-VILQLLEIPQ 45 (327)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTT-TTTCTTCC-EEEEEECCGG
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhC-CCCCCCCC-CEEEEEeCCC
Confidence 3589999997 99999999999988 721 11 2899999875
No 320
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=95.72 E-value=0.012 Score=55.96 Aligned_cols=23 Identities=30% Similarity=0.572 Sum_probs=20.8
Q ss_pred CceEEEECCCHHHHHHHHHHHHh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDS 65 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~ 65 (333)
++||+|||+|.+|+.++..+.++
T Consensus 3 ~irvgIiG~G~VG~~~~~~l~~~ 25 (332)
T 2ejw_A 3 ALKIALLGGGTVGSAFYNLVLER 25 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT
T ss_pred eeEEEEEcCCHHHHHHHHHHHhC
Confidence 47999999999999999998775
No 321
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=95.64 E-value=0.022 Score=52.22 Aligned_cols=46 Identities=17% Similarity=0.081 Sum_probs=32.1
Q ss_pred EEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecC
Q 019978 149 KVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (333)
Q Consensus 149 ~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi 200 (333)
.+++|+++.+.++|+|+.|-+...+++...++ +.. +.-+++.+-|.
T Consensus 49 ~a~~d~d~lla~pD~VVe~A~~~av~e~~~~i---L~a---G~dvv~~S~ga 94 (253)
T 1j5p_A 49 VVRLDEFQVPSDVSTVVECASPEAVKEYSLQI---LKN---PVNYIIISTSA 94 (253)
T ss_dssp SEECSSCCCCTTCCEEEECSCHHHHHHHHHHH---TTS---SSEEEECCGGG
T ss_pred eeeCCHHHHhhCCCEEEECCCHHHHHHHHHHH---HHC---CCCEEEcChhh
Confidence 35667777667899999999888776655444 444 56677776663
No 322
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=95.59 E-value=0.013 Score=52.85 Aligned_cols=38 Identities=18% Similarity=0.161 Sum_probs=34.2
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
+|||.|.|+|.+|+.++..|.+. | ++|+..+|+++..+
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~-g-----~~V~~~~r~~~~~~ 42 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQ-G-----WRIIGTSRNPDQME 42 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGG-T-----CEEEEEESCGGGHH
T ss_pred cCcEEEECCcHHHHHHHHHHHHC-C-----CEEEEEEcChhhhh
Confidence 47999999999999999999999 8 99999999886543
No 323
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=95.59 E-value=0.091 Score=51.77 Aligned_cols=34 Identities=24% Similarity=0.358 Sum_probs=30.0
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
.||.|||+|..|+.++..|+.. |. -+++++|.+.
T Consensus 41 ~~VlvvG~GGlGs~va~~La~a-Gv----g~i~ivD~D~ 74 (434)
T 1tt5_B 41 CKVLVIGAGGLGCELLKNLALS-GF----RQIHVIDMDT 74 (434)
T ss_dssp CCEEEECSSTHHHHHHHHHHHT-TC----CCEEEEECCB
T ss_pred CEEEEECcCHHHHHHHHHHHHc-CC----CEEEEEcCCE
Confidence 5899999999999999999999 82 4799998764
No 324
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.54 E-value=0.019 Score=54.21 Aligned_cols=35 Identities=23% Similarity=0.330 Sum_probs=31.4
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCe-eEEEEecCCc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGR 83 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~-~V~l~~r~~~ 83 (333)
.+++.|+|+|-+|.+++..|++. | . +|++++|+++
T Consensus 148 gk~~lVlGAGGaaraia~~L~~~-G-----~~~v~v~nRt~~ 183 (312)
T 3t4e_A 148 GKTMVLLGAGGAATAIGAQAAIE-G-----IKEIKLFNRKDD 183 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-T-----CSEEEEEECSST
T ss_pred CCEEEEECcCHHHHHHHHHHHHc-C-----CCEEEEEECCCc
Confidence 36999999999999999999998 8 6 8999999943
No 325
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=95.52 E-value=0.015 Score=50.14 Aligned_cols=36 Identities=22% Similarity=0.276 Sum_probs=33.0
Q ss_pred ceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcch
Q 019978 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (333)
Q Consensus 44 ~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (333)
|||.|.|+ |.+|+.++..|++. | ++|++++|+++..
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~R~~~~~ 37 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNR-G-----HEVTAIVRNAGKI 37 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESCSHHH
T ss_pred CeEEEEcCCchhHHHHHHHHHhC-C-----CEEEEEEcCchhh
Confidence 79999996 99999999999999 8 9999999998654
No 326
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=95.50 E-value=0.025 Score=56.60 Aligned_cols=48 Identities=21% Similarity=0.115 Sum_probs=37.2
Q ss_pred hHHHHhhccCCCCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcc
Q 019978 30 DELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (333)
Q Consensus 30 ~~~~~~~~~~~~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (333)
+...|..++.- .-++++|+|+|.+|.++|..|+.. | .+|.+++++++.
T Consensus 253 dgi~r~tg~~L-~GKtVvVtGaGgIG~aiA~~Laa~-G-----A~Viv~D~~~~~ 300 (488)
T 3ond_A 253 DGLMRATDVMI-AGKVAVVAGYGDVGKGCAAALKQA-G-----ARVIVTEIDPIC 300 (488)
T ss_dssp HHHHHHHCCCC-TTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHH
T ss_pred HHHHHHcCCcc-cCCEEEEECCCHHHHHHHHHHHHC-C-----CEEEEEcCCHHH
Confidence 33445555422 236899999999999999999998 8 899999998754
No 327
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=95.47 E-value=0.018 Score=53.11 Aligned_cols=37 Identities=19% Similarity=0.364 Sum_probs=33.3
Q ss_pred CceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcch
Q 019978 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (333)
Q Consensus 43 ~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (333)
+|||.|.|+ |.+|+.++..|.+. | ++|++.+|+++..
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~~~ 50 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAA-G-----HDLVLIHRPSSQI 50 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT-T-----CEEEEEECTTSCG
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-C-----CEEEEEecChHhh
Confidence 479999996 99999999999999 8 9999999987654
No 328
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=95.45 E-value=0.16 Score=48.44 Aligned_cols=51 Identities=20% Similarity=0.205 Sum_probs=37.2
Q ss_pred HhhhHHHHhhccCCC---CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 27 ERLDELRRLMGKAEG---DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 27 ~~~~~~~~~~~~~~~---~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
+|.+.-.+++|...- ...+|.|+|+|..|+.++..|+.. |. -.++++|.+.
T Consensus 17 ~rY~Rq~~l~G~~~q~~L~~~~VlivG~GGlG~~ia~~La~~-Gv----g~itlvD~d~ 70 (346)
T 1y8q_A 17 AQYDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILA-GV----KGLTMLDHEQ 70 (346)
T ss_dssp HHHHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHH-TC----SEEEEECCCB
T ss_pred HHHHHHHHhhCHHHHHHHhCCeEEEECCCHHHHHHHHHHHHc-CC----CEEEEEECCC
Confidence 355555555553321 136999999999999999999999 82 3799998764
No 329
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=95.42 E-value=0.035 Score=53.26 Aligned_cols=39 Identities=15% Similarity=0.221 Sum_probs=27.9
Q ss_pred HHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCc
Q 019978 156 EAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (333)
Q Consensus 156 ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~ 201 (333)
+.+.++|+||+|+|.....++++.+ . . ++.+|.++.-+.
T Consensus 76 ~~~~~~DvVf~alg~~~s~~~~~~~-~---~---G~~vIDlSa~~R 114 (352)
T 2nqt_A 76 AVLGGHDAVFLALPHGHSAVLAQQL-S---P---ETLIIDCGADFR 114 (352)
T ss_dssp HHHTTCSEEEECCTTSCCHHHHHHS-C---T---TSEEEECSSTTT
T ss_pred HHhcCCCEEEECCCCcchHHHHHHH-h---C---CCEEEEECCCcc
Confidence 3466899999999998777766665 2 2 567887765443
No 330
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=95.41 E-value=0.024 Score=51.20 Aligned_cols=38 Identities=24% Similarity=0.142 Sum_probs=32.3
Q ss_pred ceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 44 ~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
|||.|.|+ |.+|+.++..|.+..| ++|++.+|+++...
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g-----~~V~~~~R~~~~~~ 39 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHI-----DHFHIGVRNVEKVP 39 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTC-----TTEEEEESSGGGSC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCC-----CcEEEEECCHHHHH
Confidence 78999996 9999999999987514 89999999987543
No 331
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=95.30 E-value=0.14 Score=52.43 Aligned_cols=34 Identities=21% Similarity=0.242 Sum_probs=30.0
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
.||.|||+|..|+.+|..|+.. |. -+++++|.+.
T Consensus 328 ~kVLIVGaGGLGs~va~~La~a-GV----G~ItLvD~D~ 361 (598)
T 3vh1_A 328 TKVLLLGAGTLGCYVSRALIAW-GV----RKITFVDNGT 361 (598)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TC----CEEEEECCSB
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CC----CEEEEECCCc
Confidence 6999999999999999999999 82 3799998763
No 332
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=95.29 E-value=0.095 Score=53.76 Aligned_cols=34 Identities=21% Similarity=0.242 Sum_probs=30.5
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
.||.|||+|..|+.+|..|+.. |. -+++++|.+.
T Consensus 327 arVLIVGaGGLGs~vA~~La~a-GV----G~ItLvD~D~ 360 (615)
T 4gsl_A 327 TKVLLLGAGTLGCYVSRALIAW-GV----RKITFVDNGT 360 (615)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TC----CEEEEECCCB
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CC----CEEEEEcCCC
Confidence 6999999999999999999999 82 4799999875
No 333
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=95.26 E-value=0.03 Score=49.10 Aligned_cols=37 Identities=22% Similarity=0.348 Sum_probs=33.1
Q ss_pred ceEEEECC-CHHHHHHHHHHHHhcCCCCCCe--eEEEEecCCcchh
Q 019978 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPGRSVD 86 (333)
Q Consensus 44 ~kI~IIGa-G~mG~alA~~La~~~G~~~~~~--~V~l~~r~~~~~~ 86 (333)
|+|.|.|+ |.+|.+++..|++. | + +|++++|+++..+
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~~~-G-----~~~~V~~~~r~~~~~~ 58 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEILEQ-G-----LFSKVTLIGRRKLTFD 58 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHH-T-----CCSEEEEEESSCCCCC
T ss_pred CeEEEECCCcHHHHHHHHHHHcC-C-----CCCEEEEEEcCCCCcc
Confidence 78999995 99999999999999 8 8 9999999986543
No 334
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.26 E-value=0.045 Score=49.20 Aligned_cols=35 Identities=14% Similarity=0.125 Sum_probs=31.5
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
.-++|.|||+|.+|..-+..|.+. | .+|++++.+.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~-G-----A~VtVvap~~ 64 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQE-G-----AAITVVAPTV 64 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGG-C-----CCEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-C-----CEEEEECCCC
Confidence 347999999999999999999999 8 8999998764
No 335
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=95.16 E-value=0.018 Score=49.88 Aligned_cols=36 Identities=25% Similarity=0.289 Sum_probs=33.0
Q ss_pred ceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcch
Q 019978 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (333)
Q Consensus 44 ~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (333)
|||.|.|+ |.+|..++..|++. | ++|++.+|+++..
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~-g-----~~V~~~~R~~~~~ 37 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRR-G-----HEVLAVVRDPQKA 37 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESCHHHH
T ss_pred CEEEEEcCCCHHHHHHHHHHHHC-C-----CEEEEEEeccccc
Confidence 78999998 99999999999999 8 9999999987654
No 336
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=95.11 E-value=0.017 Score=56.35 Aligned_cols=36 Identities=19% Similarity=0.214 Sum_probs=32.2
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (333)
..+|+|||+|..|.+.|..|++. | ++|+++++.+..
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~-G-----~~V~llEk~~~~ 62 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKR-G-----RRVLVIDHARAP 62 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-C-----CcEEEEeCCCCC
Confidence 36899999999999999999999 8 899999998753
No 337
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=95.10 E-value=0.065 Score=52.98 Aligned_cols=45 Identities=18% Similarity=0.207 Sum_probs=29.2
Q ss_pred EecCHHHHhc--CCCEEEEecCc-hhHHHHHHHHHhhhhccCCCCEEEEeeecC
Q 019978 150 VVTNLQEAVW--DADIVINGLPS-TETKEVFEEISRYWKERITVPVIISLAKGV 200 (333)
Q Consensus 150 ~t~d~~ea~~--~aDlIIlaVps-~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi 200 (333)
.++|+++.+. +.|+|++++|. ....+.+.+ .+.. ++.|++..|++
T Consensus 66 ~~~d~~ell~d~diDvVve~tp~~~~h~~~~~~---AL~a---GKhVvtenkal 113 (444)
T 3mtj_A 66 LTTNPFDVVDDPEIDIVVELIGGLEPARELVMQ---AIAN---GKHVVTANKHL 113 (444)
T ss_dssp EESCTHHHHTCTTCCEEEECCCSSTTHHHHHHH---HHHT---TCEEEECCHHH
T ss_pred ccCCHHHHhcCCCCCEEEEcCCCchHHHHHHHH---HHHc---CCEEEECCccc
Confidence 5577888776 47999999996 444444433 2333 66787766643
No 338
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=95.09 E-value=0.016 Score=55.03 Aligned_cols=48 Identities=23% Similarity=0.176 Sum_probs=38.5
Q ss_pred hHHHHhhccCCCCCceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcc
Q 019978 30 DELRRLMGKAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (333)
Q Consensus 30 ~~~~~~~~~~~~~~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (333)
++++++..|.. .+|+|.|.|+ |.+|+.++..|.+. | ++|++.+|+++.
T Consensus 17 ~~~~~~~~~~~-~~~~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~~ 65 (379)
T 2c5a_A 17 KELEREQYWPS-ENLKISITGAGGFIASHIARRLKHE-G-----HYVIASDWKKNE 65 (379)
T ss_dssp TTCCCCCSCTT-SCCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESSCCS
T ss_pred HHHhccccccc-cCCeEEEECCccHHHHHHHHHHHHC-C-----CeEEEEECCCcc
Confidence 34444444444 5689999998 99999999999999 8 999999998754
No 339
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=95.08 E-value=0.019 Score=53.82 Aligned_cols=40 Identities=18% Similarity=0.177 Sum_probs=32.7
Q ss_pred ccCCCCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 37 GKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 37 ~~~~~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
..+......|+|||+|..|.+.|..|++. | ++|+++++..
T Consensus 11 ~~~~~~~~dvvIIGgG~~Gl~~A~~La~~-G-----~~V~llE~~~ 50 (382)
T 1ryi_A 11 IRAMKRHYEAVVIGGGIIGSAIAYYLAKE-N-----KNTALFESGT 50 (382)
T ss_dssp ---CCSEEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred hhccCCCCCEEEECcCHHHHHHHHHHHhC-C-----CcEEEEeCCC
Confidence 33334456899999999999999999999 8 8999999864
No 340
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=95.08 E-value=0.1 Score=49.72 Aligned_cols=36 Identities=22% Similarity=0.346 Sum_probs=26.9
Q ss_pred hcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeec
Q 019978 158 VWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 158 ~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kG 199 (333)
+.++|+||+|+|.....+.+..+.. . ++.||+++.-
T Consensus 75 ~~~vDvVf~atp~~~s~~~a~~~~~---a---G~~VId~s~~ 110 (350)
T 2ep5_A 75 HKDVDVVLSALPNELAESIELELVK---N---GKIVVSNASP 110 (350)
T ss_dssp GTTCSEEEECCCHHHHHHHHHHHHH---T---TCEEEECSST
T ss_pred hcCCCEEEECCChHHHHHHHHHHHH---C---CCEEEECCcc
Confidence 4789999999999887777766543 3 5678887644
No 341
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=95.07 E-value=0.023 Score=54.13 Aligned_cols=36 Identities=19% Similarity=0.335 Sum_probs=32.5
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
..++|+|||+|..|.++|..|++. | ++|+++++.+.
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~-G-----~~V~v~E~~~~ 57 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQS-G-----IDCDVYEAVKE 57 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-C-----CCEEEEeCCCC
Confidence 347999999999999999999999 8 99999999874
No 342
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=95.04 E-value=0.021 Score=54.11 Aligned_cols=36 Identities=11% Similarity=0.145 Sum_probs=31.4
Q ss_pred CceEEEECCCHH-HHHHHHHHHHhcCCCCCCeeEEEEecCCcc
Q 019978 43 PLRIVGVGAGAW-GSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (333)
Q Consensus 43 ~~kI~IIGaG~m-G~alA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (333)
.++++|||+|.| |..+|..|... | ..|++.+|+..+
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~-g-----AtVtv~nR~~~~ 213 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLAND-G-----ATVYSVDVNNIQ 213 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTT-S-----CEEEEECSSEEE
T ss_pred CCEEEEECCCcchHHHHHHHHHHC-C-----CEEEEEeCchHH
Confidence 479999999975 99999999988 7 789999998643
No 343
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=95.04 E-value=0.025 Score=52.72 Aligned_cols=34 Identities=29% Similarity=0.343 Sum_probs=31.2
Q ss_pred CceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 43 ~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
+|+|.|.|+ |.+|..++..|.+. | ++|++.+|++
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~-g-----~~V~~l~R~~ 44 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDA-H-----RPTYILARPG 44 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHT-T-----CCEEEEECSS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHC-C-----CCEEEEECCC
Confidence 479999998 99999999999998 8 9999999987
No 344
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.99 E-value=0.045 Score=51.40 Aligned_cols=36 Identities=14% Similarity=0.021 Sum_probs=32.1
Q ss_pred CCceEEEECCCHHHHH-HHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 42 DPLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~a-lA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
+++||.|||.|.+|.+ +|..|.+. | ++|+++|+++.
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~-G-----~~V~~~D~~~~ 39 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEA-G-----FEVSGCDAKMY 39 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHT-T-----CEEEEEESSCC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhC-C-----CEEEEEcCCCC
Confidence 4689999999999995 99999998 8 99999999763
No 345
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=94.98 E-value=0.026 Score=51.39 Aligned_cols=35 Identities=23% Similarity=0.396 Sum_probs=32.3
Q ss_pred ceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcc
Q 019978 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (333)
Q Consensus 44 ~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (333)
|||.|.|+ |.+|+.++..|.+. | |+|+...|+++.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~-G-----~~V~~l~R~~~~ 36 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNAR-G-----HEVTLVSRKPGP 36 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESSCCT
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-C-----CEEEEEECCCCc
Confidence 89999998 99999999999999 8 999999998753
No 346
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=94.94 E-value=0.029 Score=53.49 Aligned_cols=36 Identities=19% Similarity=0.456 Sum_probs=32.6
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
..++|+|||+|..|.++|..|++. | ++|+++++.+.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~-G-----~~v~v~E~~~~ 60 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQN-G-----IDVSVYERDND 60 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-C-----CCEEEEeCCCC
Confidence 346999999999999999999999 8 99999999764
No 347
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=94.90 E-value=0.053 Score=51.39 Aligned_cols=39 Identities=10% Similarity=0.167 Sum_probs=27.9
Q ss_pred CCCEEEEecCchhH-HHHHHHHHhhhhccCCCCEEEEeeecCc
Q 019978 160 DADIVINGLPSTET-KEVFEEISRYWKERITVPVIISLAKGVE 201 (333)
Q Consensus 160 ~aDlIIlaVps~~~-~~vl~~i~~~l~~~~~~~~Ivs~~kGi~ 201 (333)
+.|+|+.|+|+... ....+.+...+.. ++.||+..|+..
T Consensus 82 ~iDvVVe~T~~~~~~~pa~~~~~~aL~a---GkhVVtaNK~~l 121 (325)
T 3ing_A 82 AADLLVDCTPASRDGVREYSLYRMAFES---GMNVVTANKSGL 121 (325)
T ss_dssp CCSEEEECCCCCSSSHHHHHHHHHHHHT---TCEEEECCCHHH
T ss_pred CCCEEEECCCCccccchHHHHHHHHHHC---CCeEEEcCchhH
Confidence 58999999998643 5555556666665 678888777643
No 348
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=94.89 E-value=0.03 Score=50.88 Aligned_cols=34 Identities=21% Similarity=0.142 Sum_probs=31.6
Q ss_pred CceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 43 ~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
+|+|.|.|+ |.+|..++..|.+. | ++|++.+|++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~R~~ 36 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKA-G-----NPTYALVRKT 36 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHH-T-----CCEEEEECCS
T ss_pred CcEEEEECCCchHHHHHHHHHHhC-C-----CcEEEEECCC
Confidence 478999997 99999999999999 8 9999999986
No 349
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=94.88 E-value=0.03 Score=46.98 Aligned_cols=35 Identities=17% Similarity=0.248 Sum_probs=31.7
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
+.+|+|||+|..|..+|..|++. | .+|+++++.+.
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~-g-----~~v~lie~~~~ 35 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARA-G-----LKVLVLDGGRS 35 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECSCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-C-----CcEEEEeCCCC
Confidence 35899999999999999999998 8 89999998763
No 350
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=94.85 E-value=0.14 Score=48.92 Aligned_cols=35 Identities=9% Similarity=0.129 Sum_probs=26.0
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEE-EEecCCc
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGR 83 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~-l~~r~~~ 83 (333)
+||+|+|+|.+|..++..|..+ . +.+|. +.+++++
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~-~----~~evvaV~d~~~~ 38 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQ-D----DMEVIGVTKTKPD 38 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHS-S----SEEEEEEEESSCS
T ss_pred eEEEEECCCHHHHHHHHHHHhC-C----CceEEEEecCCHH
Confidence 6999999999999999998765 3 15544 4455433
No 351
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=94.70 E-value=0.078 Score=51.12 Aligned_cols=38 Identities=13% Similarity=0.033 Sum_probs=29.0
Q ss_pred HhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecC
Q 019978 157 AVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (333)
Q Consensus 157 a~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi 200 (333)
.+.++|+||+|+|...-.+.+..+.. . ++.+|.++.-+
T Consensus 61 ~~~~~Dvvf~a~~~~~s~~~a~~~~~---~---G~~vIDlSa~~ 98 (366)
T 3pwk_A 61 AFEGVDIALFSAGSSTSAKYAPYAVK---A---GVVVVDNTSYF 98 (366)
T ss_dssp TTTTCSEEEECSCHHHHHHHHHHHHH---T---TCEEEECSSTT
T ss_pred HhcCCCEEEECCChHhHHHHHHHHHH---C---CCEEEEcCCcc
Confidence 36789999999998887777776643 3 67788887654
No 352
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=94.70 E-value=0.21 Score=47.68 Aligned_cols=34 Identities=24% Similarity=0.336 Sum_probs=30.5
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
.||.|||+|..|+.++..|+.. |. -+++++|++.
T Consensus 119 ~~VlvvG~GglGs~va~~La~a-Gv----g~i~lvD~D~ 152 (353)
T 3h5n_A 119 AKVVILGCGGIGNHVSVILATS-GI----GEIILIDNDQ 152 (353)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TC----SEEEEEECCB
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CC----CeEEEECCCc
Confidence 6999999999999999999999 82 4799999875
No 353
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=94.67 E-value=0.42 Score=44.53 Aligned_cols=34 Identities=26% Similarity=0.364 Sum_probs=30.3
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
.||.|||+|..|+.++..|+.. |. -+++++|.+.
T Consensus 37 ~~VlVvGaGGlGs~va~~La~a-GV----G~i~lvD~D~ 70 (292)
T 3h8v_A 37 FAVAIVGVGGVGSVTAEMLTRC-GI----GKLLLFDYDK 70 (292)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TC----SEEEEECCCB
T ss_pred CeEEEECcCHHHHHHHHHHHHc-CC----CEEEEECCCc
Confidence 6999999999999999999999 82 4788998875
No 354
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=94.67 E-value=0.072 Score=48.81 Aligned_cols=34 Identities=21% Similarity=0.281 Sum_probs=31.2
Q ss_pred ceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 44 ~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
++|.|.|+ |.+|..++..|.+. | ++|++.+|+++
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~-g-----~~V~~l~R~~~ 46 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKL-G-----HPTYVFTRPNS 46 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHT-T-----CCEEEEECTTC
T ss_pred CeEEEECCCchHHHHHHHHHHHC-C-----CcEEEEECCCC
Confidence 48999996 99999999999999 8 99999999875
No 355
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=94.66 E-value=0.096 Score=52.23 Aligned_cols=40 Identities=18% Similarity=0.253 Sum_probs=30.8
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (333)
.+||.|||+|.||++++..++++ ..+.. .+|++.+.+...
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~-~dv~~-~~I~vaD~~~~~ 52 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEK-FDIKP-SQVTIIAAEGTK 52 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHH-BCCCG-GGEEEEESSCCS
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-CCCce-eEEEEeccchhh
Confidence 47999999999999999999998 42211 268888776643
No 356
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=94.65 E-value=0.052 Score=49.40 Aligned_cols=35 Identities=23% Similarity=0.223 Sum_probs=31.9
Q ss_pred CceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 43 ~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
+|+|.|.|+ |.+|+.++..|.+. | ++|++.+|+..
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~-g-----~~V~~~~R~~~ 39 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISL-G-----HPTYVLFRPEV 39 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT-T-----CCEEEECCSCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC-C-----CcEEEEECCCc
Confidence 579999996 99999999999999 8 99999999863
No 357
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=94.57 E-value=0.044 Score=49.74 Aligned_cols=35 Identities=26% Similarity=0.228 Sum_probs=32.0
Q ss_pred CceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 43 ~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
+|+|.|+|+ |.+|..++..|.+. | ++|++.+|+..
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~-g-----~~V~~l~R~~~ 39 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDL-G-----HPTFLLVREST 39 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT-T-----CCEEEECCCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC-C-----CCEEEEECCcc
Confidence 579999997 99999999999999 8 99999999864
No 358
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=94.55 E-value=0.03 Score=52.04 Aligned_cols=34 Identities=26% Similarity=0.558 Sum_probs=30.8
Q ss_pred CceEEEECCCHHHHHHHHHHHH---hcCCCCCCeeEEEEecCC
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQD---SYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~---~~G~~~~~~~V~l~~r~~ 82 (333)
|++|+|||+|..|.+.|..|++ . | ++|+++++..
T Consensus 1 m~dV~IIGaG~aGl~~A~~L~~~~~~-G-----~~V~v~Ek~~ 37 (342)
T 3qj4_A 1 MAQVLIVGAGMTGSLCAALLRRQTSG-P-----LYLAVWDKAD 37 (342)
T ss_dssp CEEEEEECCSHHHHHHHHHHHSCC-C-C-----EEEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHHhhccC-C-----ceEEEEECCC
Confidence 3689999999999999999999 7 7 9999998764
No 359
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=94.52 E-value=0.052 Score=49.59 Aligned_cols=34 Identities=24% Similarity=0.300 Sum_probs=31.2
Q ss_pred ceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 44 ~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
|||.|.|+ |.+|+.++..|.+. | ++|+..+|++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~ 37 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKND-G-----NTPIILTRSIG 37 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhC-C-----CEEEEEeCCCC
Confidence 79999995 99999999999999 8 99999999843
No 360
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=94.51 E-value=0.052 Score=49.75 Aligned_cols=34 Identities=21% Similarity=0.173 Sum_probs=31.6
Q ss_pred CceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 43 ~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
+|+|.|.|+ |.+|++++..|.+. | ++|++.+|++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~-g-----~~V~~~~R~~ 38 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSF-S-----HPTFIYARPL 38 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHT-T-----CCEEEEECCC
T ss_pred ccEEEEEcCCchhHHHHHHHHHhC-C-----CcEEEEECCc
Confidence 578999996 99999999999999 8 9999999986
No 361
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=94.45 E-value=0.11 Score=49.80 Aligned_cols=101 Identities=16% Similarity=0.201 Sum_probs=61.5
Q ss_pred CCCceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhhhhhhhHHHHHhhhhhHHHHhhhcccccchhhh
Q 019978 41 GDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (333)
Q Consensus 41 ~~~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (333)
++|.||+|||+ |..|.-|.+.|.+. . ..++..+.... .+-+ .+ .+ .++.+
T Consensus 11 ~~~~~V~IvGAtG~vG~ellrlL~~h-P----~~el~~l~S~~-~aG~----~~----~~-------------~~p~~-- 61 (351)
T 1vkn_A 11 HHMIRAGIIGATGYTGLELVRLLKNH-P----EAKITYLSSRT-YAGK----KL----EE-------------IFPST-- 61 (351)
T ss_dssp -CCEEEEEESTTSHHHHHHHHHHHHC-T----TEEEEEEECST-TTTS----BH----HH-------------HCGGG--
T ss_pred cceeEEEEECCCCHHHHHHHHHHHcC-C----CcEEEEEeCcc-cccC----Ch----HH-------------hChhh--
Confidence 46789999996 99999999999976 3 25666554332 1110 00 00 01110
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeec
Q 019978 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (333)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kG 199 (333)
.. .+ .+.. .|.++...++|++|+|+|...-.++..++ . ++.||+++.-
T Consensus 62 --~~-~l--------------------~~~~-~~~~~~~~~~Dvvf~alp~~~s~~~~~~~-----~---g~~VIDlSsd 109 (351)
T 1vkn_A 62 --LE-NS--------------------ILSE-FDPEKVSKNCDVLFTALPAGASYDLVREL-----K---GVKIIDLGAD 109 (351)
T ss_dssp --CC-CC--------------------BCBC-CCHHHHHHHCSEEEECCSTTHHHHHHTTC-----C---SCEEEESSST
T ss_pred --cc-Cc--------------------eEEe-CCHHHhhcCCCEEEECCCcHHHHHHHHHh-----C---CCEEEECChh
Confidence 00 00 1111 24444346899999999999888887766 3 6789988765
Q ss_pred Ccc
Q 019978 200 VEA 202 (333)
Q Consensus 200 i~~ 202 (333)
+-.
T Consensus 110 fRl 112 (351)
T 1vkn_A 110 FRF 112 (351)
T ss_dssp TTC
T ss_pred hhC
Confidence 543
No 362
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=94.44 E-value=0.06 Score=52.43 Aligned_cols=37 Identities=27% Similarity=0.327 Sum_probs=32.3
Q ss_pred CCCCceEEEECCCHHHHHHHHHHHHhcCCCCCCe-eEEEEecCC
Q 019978 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPG 82 (333)
Q Consensus 40 ~~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~-~V~l~~r~~ 82 (333)
.-...||+|+|+|+-|.++|..+..- | . +|+++|++.
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~-G-----a~~I~v~D~~G 222 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAA-G-----ATKVTVVDKFG 222 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHH-T-----CCEEEEEETTE
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHc-C-----CCeEEEEECCC
Confidence 34457999999999999999999988 8 5 899999974
No 363
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=94.44 E-value=0.1 Score=50.62 Aligned_cols=39 Identities=18% Similarity=0.283 Sum_probs=30.0
Q ss_pred HhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCc
Q 019978 157 AVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (333)
Q Consensus 157 a~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~ 201 (333)
.+.++|+||+|+|...-.++...+.. . ++.||.++.-+-
T Consensus 90 ~~~~~Dvvf~alp~~~s~~~~~~~~~---~---G~~VIDlSa~fR 128 (381)
T 3hsk_A 90 NFLECDVVFSGLDADVAGDIEKSFVE---A---GLAVVSNAKNYR 128 (381)
T ss_dssp TGGGCSEEEECCCHHHHHHHHHHHHH---T---TCEEEECCSTTT
T ss_pred hcccCCEEEECCChhHHHHHHHHHHh---C---CCEEEEcCCccc
Confidence 35789999999999988888887643 3 677888776543
No 364
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=94.44 E-value=0.031 Score=54.22 Aligned_cols=33 Identities=27% Similarity=0.324 Sum_probs=30.9
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
++|+|||+|..|.++|..|++. | ++|+++++.+
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~-G-----~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQH-D-----VDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT-T-----CEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHC-C-----CeEEEEcCCC
Confidence 4899999999999999999999 8 9999999875
No 365
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=94.43 E-value=0.033 Score=51.75 Aligned_cols=32 Identities=19% Similarity=0.249 Sum_probs=30.1
Q ss_pred EEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 46 IVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 46 I~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
|+|||+|.-|++.|..|++. | ++|+++++.++
T Consensus 7 ViIVGaGpaGl~~A~~La~~-G-----~~V~v~Er~~~ 38 (397)
T 3oz2_A 7 VLVVGGGPGGSTAARYAAKY-G-----LKTLMIEKRPE 38 (397)
T ss_dssp EEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSSS
T ss_pred EEEECcCHHHHHHHHHHHHC-C-----CcEEEEeCCCC
Confidence 99999999999999999999 8 99999998764
No 366
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=94.39 E-value=0.049 Score=52.28 Aligned_cols=24 Identities=29% Similarity=0.430 Sum_probs=21.6
Q ss_pred CCceEEEECCCHHHHHHHHHHHHh
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDS 65 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~ 65 (333)
.++||+|||+|.||+.++..+.+.
T Consensus 3 k~i~vgIiG~G~VG~~~~~~l~~~ 26 (358)
T 1ebf_A 3 KVVNVAVIGAGVVGSAFLDQLLAM 26 (358)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHC
T ss_pred ceEEEEEEecCHHHHHHHHHHHhc
Confidence 457999999999999999999875
No 367
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=94.39 E-value=0.11 Score=47.92 Aligned_cols=67 Identities=19% Similarity=0.222 Sum_probs=45.9
Q ss_pred ccccccccccchHHhhhHHHHhhccCCCCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhh
Q 019978 14 SNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (333)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (333)
.+|-++-.|-.-.==+.++++. +. ....+++.|+|+|-.+.+++..|++. |. .+|++++|+.+++++
T Consensus 98 ~dG~l~G~NTD~~Gf~~~L~~~-g~-~~~~~~~lilGaGGaarai~~aL~~~-g~----~~i~i~nRt~~ra~~ 164 (269)
T 3tum_A 98 RDGRLLGDNVDGAGFLGAAHKH-GF-EPAGKRALVIGCGGVGSAIAYALAEA-GI----ASITLCDPSTARMGA 164 (269)
T ss_dssp TTSCEEEECCHHHHHHHHHHHT-TC-CCTTCEEEEECCSHHHHHHHHHHHHT-TC----SEEEEECSCHHHHHH
T ss_pred CCCEEEEEEcChHHHHHHHHHh-CC-CcccCeEEEEecHHHHHHHHHHHHHh-CC----CeEEEeCCCHHHHHH
Confidence 3454544554444444555543 22 12236899999999999999999988 72 479999999877654
No 368
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=94.37 E-value=0.071 Score=49.39 Aligned_cols=36 Identities=17% Similarity=0.092 Sum_probs=32.4
Q ss_pred CceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcc
Q 019978 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (333)
Q Consensus 43 ~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (333)
+|+|.|.|+ |.+|+.++..|.+. | ++|+..+|+...
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~~ 61 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKL-N-----QVVIGLDNFSTG 61 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEECCSSC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHC-C-----CEEEEEeCCCCC
Confidence 379999996 99999999999999 8 999999997653
No 369
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=94.34 E-value=0.098 Score=50.23 Aligned_cols=39 Identities=26% Similarity=0.270 Sum_probs=29.6
Q ss_pred HhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCc
Q 019978 157 AVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (333)
Q Consensus 157 a~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~ 201 (333)
.+.++|+||+|+|...-.++...+.. . ++.+|.++.-+-
T Consensus 76 ~~~~vDvvf~a~p~~~s~~~a~~~~~---~---G~~vIDlSa~~R 114 (359)
T 4dpl_A 76 LMDDVDIIFSPLPQGAAGPVEEQFAK---E---GFPVISNSPDHR 114 (359)
T ss_dssp GCTTCCEEEECCCTTTHHHHHHHHHH---T---TCEEEECSSTTT
T ss_pred HhcCCCEEEECCChHHHHHHHHHHHH---C---CCEEEEcCCCcc
Confidence 35789999999999988888777643 3 677888775543
No 370
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=94.34 E-value=0.098 Score=50.23 Aligned_cols=39 Identities=26% Similarity=0.270 Sum_probs=29.6
Q ss_pred HhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCc
Q 019978 157 AVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (333)
Q Consensus 157 a~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~ 201 (333)
.+.++|+||+|+|...-.++...+.. . ++.+|.++.-+-
T Consensus 76 ~~~~vDvvf~a~p~~~s~~~a~~~~~---~---G~~vIDlSa~~R 114 (359)
T 4dpk_A 76 LMDDVDIIFSPLPQGAAGPVEEQFAK---E---GFPVISNSPDHR 114 (359)
T ss_dssp GCTTCCEEEECCCTTTHHHHHHHHHH---T---TCEEEECSSTTT
T ss_pred HhcCCCEEEECCChHHHHHHHHHHHH---C---CCEEEEcCCCcc
Confidence 35789999999999988888777643 3 677888775543
No 371
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=94.32 E-value=0.051 Score=45.98 Aligned_cols=36 Identities=22% Similarity=0.240 Sum_probs=32.9
Q ss_pred ceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcch
Q 019978 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (333)
Q Consensus 44 ~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (333)
|+|.|.|+ |.+|..++..|.+. | ++|++++|+++..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~-g-----~~V~~~~r~~~~~ 40 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQA-G-----YEVTVLVRDSSRL 40 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT-T-----CEEEEEESCGGGS
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC-C-----CeEEEEEeChhhc
Confidence 79999998 99999999999999 8 9999999987643
No 372
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=94.31 E-value=0.044 Score=51.36 Aligned_cols=40 Identities=8% Similarity=0.080 Sum_probs=33.4
Q ss_pred CCceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 42 ~~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
.+|||.|.|+ |.+|+.++..|.+..| ++|++.+|+++...
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~~g-----~~V~~~~r~~~~~~ 63 (372)
T 3slg_A 23 KAKKVLILGVNGFIGHHLSKRILETTD-----WEVFGMDMQTDRLG 63 (372)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHHSS-----CEEEEEESCCTTTG
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCC-----CEEEEEeCChhhhh
Confidence 3589999995 9999999999988624 89999999886543
No 373
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=94.31 E-value=0.026 Score=56.11 Aligned_cols=35 Identities=26% Similarity=0.360 Sum_probs=31.6
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcc
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (333)
.+|.|||+|..|.++|..|++. | ++|+++++.+..
T Consensus 12 ~dVlIVGaGpaGl~~A~~La~~-G-----~~v~vlE~~~~~ 46 (500)
T 2qa1_A 12 AAVIVVGAGPAGMMLAGELRLA-G-----VEVVVLERLVER 46 (500)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESCCC-
T ss_pred CCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEeCCCCC
Confidence 5899999999999999999999 8 999999987653
No 374
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=94.29 E-value=0.037 Score=47.96 Aligned_cols=36 Identities=25% Similarity=0.265 Sum_probs=32.7
Q ss_pred ceEEEEC-CCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcch
Q 019978 44 LRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (333)
Q Consensus 44 ~kI~IIG-aG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (333)
|||.|.| +|.+|..++..|++. | ++|++.+|+++..
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~-g-----~~V~~~~R~~~~~ 37 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTT-D-----YQIYAGARKVEQV 37 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTS-S-----CEEEEEESSGGGS
T ss_pred CeEEEECCCCHHHHHHHHHHHHC-C-----CEEEEEECCccch
Confidence 6999999 599999999999999 8 9999999998654
No 375
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=94.28 E-value=0.055 Score=50.58 Aligned_cols=33 Identities=27% Similarity=0.405 Sum_probs=30.5
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~ 81 (333)
...|+|||+|.+|.+.|..|++. | ++|+++++.
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~-G-----~~V~vle~~ 38 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARK-G-----YSVHILARD 38 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-C-----CEEEEEecc
Confidence 46899999999999999999999 8 999999975
No 376
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=94.26 E-value=0.048 Score=49.29 Aligned_cols=33 Identities=9% Similarity=-0.030 Sum_probs=30.6
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~ 81 (333)
+++|+|||+|.-|.+.|..|++. | ++|++++++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~-g-----~~v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARY-M-----LKTLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESS
T ss_pred ccCEEEECccHHHHHHHHHHHHC-C-----CcEEEEecc
Confidence 36899999999999999999999 8 999999986
No 377
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=94.22 E-value=0.041 Score=50.45 Aligned_cols=33 Identities=18% Similarity=0.341 Sum_probs=30.8
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
++|+|||+|..|.++|..|++. | .+|+++++.+
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~-G-----~~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAA-G-----HQVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHC-C-----CcEEEEECCC
Confidence 5799999999999999999999 8 8999999875
No 378
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=94.11 E-value=0.13 Score=50.92 Aligned_cols=46 Identities=13% Similarity=0.206 Sum_probs=34.2
Q ss_pred cCHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCcc
Q 019978 152 TNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (333)
Q Consensus 152 ~d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~~ 202 (333)
.++.++-+..|++++++|+....+++++.... . -..++.++.|+..
T Consensus 56 ~sl~~lp~~~Dlavi~vp~~~~~~~v~e~~~~-G----i~~vv~~s~G~~e 101 (457)
T 2csu_A 56 KSVKDIPDEIDLAIIVVPKRFVKDTLIQCGEK-G----VKGVVIITAGFGE 101 (457)
T ss_dssp SSTTSCSSCCSEEEECSCHHHHHHHHHHHHHH-T----CCEEEECCCSSTT
T ss_pred CCHHHcCCCCCEEEEecCHHHHHHHHHHHHHc-C----CCEEEEecCCCCc
Confidence 44444445789999999999999999988763 1 2356778889853
No 379
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=94.07 E-value=0.048 Score=52.13 Aligned_cols=33 Identities=33% Similarity=0.422 Sum_probs=30.8
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
|+|+|||+|..|.+.|..|++. | ++|+++.+++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~-G-----~~V~vlE~~~ 33 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARN-G-----HEIIVLEKSA 33 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-T-----CEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHC-C-----CeEEEEeCCC
Confidence 6899999999999999999999 8 8999999864
No 380
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=94.07 E-value=0.26 Score=51.77 Aligned_cols=34 Identities=24% Similarity=0.358 Sum_probs=30.3
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
.||.|||+|.+|+.++..|+.. |. -+++++|.+.
T Consensus 412 ~~vlvvG~GglG~~~~~~L~~~-Gv----g~i~l~D~d~ 445 (805)
T 2nvu_B 412 CKVLVIGAGGLGCELLKNLALS-GF----RQIHVIDMDT 445 (805)
T ss_dssp CCEEEECCSSHHHHHHHHHHTT-TC----CEEEEEECCB
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CC----CcEEEECCCe
Confidence 5899999999999999999999 82 3799999875
No 381
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=93.92 E-value=0.63 Score=48.01 Aligned_cols=34 Identities=26% Similarity=0.312 Sum_probs=30.5
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
.||.|||+|.+|+.++..|+.. |. -+++++|.+.
T Consensus 18 s~VlVVGaGGLGsevak~La~a-GV----G~ItlvD~D~ 51 (640)
T 1y8q_B 18 GRVLVVGAGGIGCELLKNLVLT-GF----SHIDLIDLDT 51 (640)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TC----CEEEEEECCB
T ss_pred CeEEEECcCHHHHHHHHHHHHc-CC----CeEEEecCCE
Confidence 6999999999999999999999 82 4799999875
No 382
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=93.82 E-value=0.16 Score=48.22 Aligned_cols=34 Identities=18% Similarity=0.262 Sum_probs=25.6
Q ss_pred CceEEEEC-CCHHHHHHHHHHHHhcCCCCCCeeEEEEe
Q 019978 43 PLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWR 79 (333)
Q Consensus 43 ~~kI~IIG-aG~mG~alA~~La~~~G~~~~~~~V~l~~ 79 (333)
++||+|+| .|.+|..+...|.++ + + +..+++.+.
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~-~-~-p~~elv~i~ 37 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQER-E-F-PVDELFLLA 37 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHT-T-C-CEEEEEEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHhcC-C-C-CCEEEEEEE
Confidence 58999999 799999999998876 3 1 115666554
No 383
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=93.82 E-value=0.069 Score=53.56 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=31.5
Q ss_pred CCceEEEECCCHHHHHHHHHHHH---hcCCCCCCeeEEEEecCC
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQD---SYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~---~~G~~~~~~~V~l~~r~~ 82 (333)
..++|+|||+|..|.+.|..|++ . | ++|+++++.+
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~-G-----~~V~liE~~~ 61 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQG-T-----ADITLLQAPD 61 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTT-S-----SEEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCC-C-----CcEEEEeCCC
Confidence 35689999999999999999999 7 7 8999999864
No 384
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=93.81 E-value=0.19 Score=48.00 Aligned_cols=38 Identities=13% Similarity=-0.003 Sum_probs=29.3
Q ss_pred HhcCCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecC
Q 019978 157 AVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (333)
Q Consensus 157 a~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi 200 (333)
.+.++|+||+|+|...-.+.+..+.. . ++.+|+++.-+
T Consensus 60 ~~~~~Dvvf~a~~~~~s~~~a~~~~~---~---G~~vID~Sa~~ 97 (344)
T 3tz6_A 60 DPSGLDIALFSAGSAMSKVQAPRFAA---A---GVTVIDNSSAW 97 (344)
T ss_dssp CCTTCSEEEECSCHHHHHHHHHHHHH---T---TCEEEECSSTT
T ss_pred HhccCCEEEECCChHHHHHHHHHHHh---C---CCEEEECCCcc
Confidence 35789999999999888888777643 3 67888877544
No 385
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=93.77 E-value=0.058 Score=51.36 Aligned_cols=33 Identities=27% Similarity=0.428 Sum_probs=30.8
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
|+|+|||+|..|.+.|..|+++ | ++|+++.++.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~-G-----~~V~vlE~~~ 33 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKA-G-----HEVEVFERLP 33 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHT-T-----CEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhC-C-----CceEEEeCCC
Confidence 6899999999999999999999 8 9999998865
No 386
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=93.73 E-value=0.049 Score=49.70 Aligned_cols=35 Identities=9% Similarity=0.061 Sum_probs=31.6
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
.+++|+|||+|.-|.+.|..|++. | ++|+++++.+
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~-g-----~~v~vie~~~ 55 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARA-E-----IKPILYEGMM 55 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-T-----CCCEEECCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEecCC
Confidence 347999999999999999999999 8 9999999854
No 387
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=93.69 E-value=0.072 Score=51.13 Aligned_cols=35 Identities=23% Similarity=0.365 Sum_probs=31.5
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCe-eEEEEecCCc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGR 83 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~-~V~l~~r~~~ 83 (333)
...|.|||+|..|.+.|..|++. | + +|+++++...
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~-G-----~~~V~vlE~~~~ 41 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARR-G-----YTNVTVLDPYPV 41 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHT-T-----CCCEEEEESSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHc-C-----CCcEEEEeCCCC
Confidence 35899999999999999999999 8 8 8999998753
No 388
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=93.68 E-value=0.065 Score=49.42 Aligned_cols=33 Identities=18% Similarity=0.281 Sum_probs=31.0
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
..|+|||+|..|.+.|..|++. | ++|+++++.+
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~-G-----~~V~vlE~~~ 37 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAG-G-----HEVLVAEAAE 37 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhC-C-----CeEEEEeCCC
Confidence 5899999999999999999999 8 9999999974
No 389
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=93.68 E-value=0.043 Score=53.62 Aligned_cols=34 Identities=21% Similarity=0.264 Sum_probs=30.8
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
|++|+|||+|--|.+-|..|+++ | ++|+++.++.
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~-G-----~~V~VlEa~~ 34 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAA-G-----IPVLLLEQRD 34 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHT-T-----CCEEEECCC-
T ss_pred CCCEEEECCcHHHHHHHHHHHHC-C-----CcEEEEccCC
Confidence 67999999999999999999999 8 9999998754
No 390
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=93.65 E-value=0.068 Score=50.80 Aligned_cols=35 Identities=31% Similarity=0.449 Sum_probs=32.2
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
.++|+|||+|..|.++|..|++. | ++|+++++.+.
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~-G-----~~v~v~E~~~~ 39 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDA-G-----VDVDVYERSPQ 39 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhC-C-----CCEEEEecCCC
Confidence 36899999999999999999999 8 99999998764
No 391
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=93.52 E-value=0.07 Score=50.94 Aligned_cols=35 Identities=9% Similarity=0.048 Sum_probs=31.2
Q ss_pred CceEEEECCCHHHHHHHHHHHH---hcCCCCCCeeEEEEecCCc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQD---SYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~---~~G~~~~~~~V~l~~r~~~ 83 (333)
|++|+|||+|.-|.+.|..|++ . | ++|+++++++.
T Consensus 1 m~~VvIIGgG~aGl~aA~~L~~~~~~-g-----~~V~vie~~~~ 38 (409)
T 3h8l_A 1 MTKVLVLGGRFGALTAAYTLKRLVGS-K-----ADVKVINKSRF 38 (409)
T ss_dssp -CEEEEECSSHHHHHHHHHHHHHHGG-G-----SEEEEEESSSE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCC-C-----CeEEEEeCCCC
Confidence 4689999999999999999999 7 6 89999998874
No 392
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=93.51 E-value=0.076 Score=51.51 Aligned_cols=34 Identities=26% Similarity=0.376 Sum_probs=31.3
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCe--eEEEEecCC
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPG 82 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~--~V~l~~r~~ 82 (333)
.++|+|||+|..|.+.|..|++. | + +|+++++.+
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~-G-----~~~~V~v~E~~~ 41 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAE-K-----AFDQVTLFERRG 41 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-T-----CCSEEEEECSSS
T ss_pred CCEEEEECccHHHHHHHHHHHhc-C-----CCCCeEEEecCC
Confidence 47999999999999999999998 8 7 999999875
No 393
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=93.50 E-value=0.074 Score=49.76 Aligned_cols=33 Identities=24% Similarity=0.280 Sum_probs=30.6
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
..|+|||+|..|.+.|..|++. | ++|+++++..
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~-G-----~~V~vie~~~ 36 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQ-G-----VKTLLVDAFD 36 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhC-C-----CeEEEEeCCC
Confidence 5899999999999999999999 8 8999999864
No 394
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=93.41 E-value=0.08 Score=49.90 Aligned_cols=35 Identities=20% Similarity=0.261 Sum_probs=32.0
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
.++|+|||+|..|.++|..|++. | ++|+++++.+.
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~-G-----~~v~viE~~~~ 45 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQN-G-----WDVRLHEKSSE 45 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-C-----CCEEEEecCCC
Confidence 36899999999999999999999 8 99999998764
No 395
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=93.38 E-value=0.073 Score=48.14 Aligned_cols=37 Identities=16% Similarity=0.177 Sum_probs=32.5
Q ss_pred ceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 44 ~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
+++.|.|+ |.+|.++|..|++. | ++|.+.+|+++.++
T Consensus 31 k~vlVTGas~GIG~aia~~l~~~-G-----~~Vi~~~r~~~~~~ 68 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLHAD-G-----LGVVIADLAAEKGK 68 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHC-C-----CEEEEEeCChHHHH
Confidence 57888896 89999999999999 8 89999999986554
No 396
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=93.33 E-value=0.13 Score=47.72 Aligned_cols=32 Identities=13% Similarity=0.164 Sum_probs=27.6
Q ss_pred ceEEEECCCH-HHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 019978 44 LRIVGVGAGA-WGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (333)
Q Consensus 44 ~kI~IIGaG~-mG~alA~~La~~~G~~~~~~~V~l~~r~ 81 (333)
+++.|||.|. +|..+|..|... | ..|+++.+.
T Consensus 151 k~vvVvG~s~iVG~plA~lL~~~-g-----AtVtv~~~~ 183 (276)
T 3ngx_A 151 NTVTIVNRSPVVGRPLSMMLLNR-N-----YTVSVCHSK 183 (276)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT-T-----CEEEEECTT
T ss_pred CEEEEEcCChHHHHHHHHHHHHC-C-----CeEEEEeCC
Confidence 7999999975 899999999998 7 889888553
No 397
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=93.31 E-value=0.72 Score=43.15 Aligned_cols=165 Identities=16% Similarity=0.144 Sum_probs=92.1
Q ss_pred CCCCeEEecCHHHHhcCCCEEEEecCchh-HHHHHHHHHhhhhccCCCCEEEEeeecCcccccCCccCCCHHHHHHhHhC
Q 019978 144 PLCPLKVVTNLQEAVWDADIVINGLPSTE-TKEVFEEISRYWKERITVPVIISLAKGVEAELEAVPRIITPTQMINRATG 222 (333)
Q Consensus 144 ~~~~i~~t~d~~ea~~~aDlIIlaVps~~-~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~~~~~~~~~~~~~se~i~~~lg 222 (333)
+-.++++++|-.||++++|++|+.+|-.. ..++++++.+++++ +.+|.. +=.+++- -+...+++ ++
T Consensus 125 EdaGVkVtsDD~EAvk~AEi~IlftPfG~~t~~Iakkii~~lpE---gAII~n-TCTipp~--------~ly~~le~-l~ 191 (358)
T 2b0j_A 125 EDVGLKVTSDDREAVEGADIVITWLPKGNKQPDIIKKFADAIPE---GAIVTH-ACTIPTT--------KFAKIFKD-LG 191 (358)
T ss_dssp GGGTCEEESCHHHHHTTCSEEEECCTTCTTHHHHHHHHGGGSCT---TCEEEE-CSSSCHH--------HHHHHHHH-TT
T ss_pred HHcCcEeecchHHHhcCCCEEEEecCCCCCcHHHHHHHHhhCcC---CCEEec-ccCCCHH--------HHHHHHHH-hC
Confidence 33588999999999999999999999865 89999999999998 665543 2223321 11122333 55
Q ss_pred CCCCcEEEEc-CCCchHHHhccCceeEEEeCChhhHHHHHHHhCCCCeEEE-ecCChhHHH--HHHHHHHHHHH-HHHHH
Q 019978 223 VPIENILYLG-GPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVW-DNGDLVTHE--VMGGLKNVYAI-GAGMV 297 (333)
Q Consensus 223 ~~~~~~~vl~-GP~~a~ev~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~-~s~Di~gve--~~~alkNv~Ai-~~Gi~ 297 (333)
+. .+.+.+ -|.-.- ...|+.....--.+++..+.+.++-.+.+-..| .-.|+++.- .|.++ .|+ -+|++
T Consensus 192 R~--DvgIsS~HPaaVP-gt~Gq~~~g~~yAtEEqIeklveLaksa~k~ay~vPAdl~SpV~DMgs~v---TAv~~AGiL 265 (358)
T 2b0j_A 192 RE--DLNITSYHPGCVP-EMKGQVYIAEGYASEEAVNKLYEIGKIARGKAFKMPANLIGPVCDMCSAV---TATVYAGLL 265 (358)
T ss_dssp CT--TSEEEECBCSSCT-TTCCCEEEEESSSCHHHHHHHHHHHHHHHSCEEEEEHHHHHHHHSTTHHH---HHHHHHHHH
T ss_pred cc--cCCeeccCCCCCC-CCCCccccccccCCHHHHHHHHHHHHHhCCCeEecchhhccchhhhHHHH---HHHHHHHHH
Confidence 32 233332 233221 124433322223456778888888776543333 445776642 33332 233 25665
Q ss_pred h----ccCCCCCccHH--HHHHHHHHHHHHH-HHCCC
Q 019978 298 A----ALTNESATSKS--VYFAHCTSEMVVM-HGMGR 327 (333)
Q Consensus 298 ~----gl~~~~~n~~~--~l~~~~~~E~~~l-~~~G~ 327 (333)
+ +....+.+..- ..+..++.-|..| +.-|.
T Consensus 266 ~Y~~~vtkIlgAP~~mie~q~~esL~tiasLve~~GI 302 (358)
T 2b0j_A 266 AYRDAVTKILGAPADFAQMMADEALTQIHNLMKEKGI 302 (358)
T ss_dssp HHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHHCG
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 4 22333444222 3444555555555 55543
No 398
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=93.31 E-value=0.078 Score=49.64 Aligned_cols=34 Identities=21% Similarity=0.264 Sum_probs=31.0
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
..+|+|||+|..|.+.|..|++. | ++|+++++..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~-G-----~~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKR-G-----EEVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-C-----CeEEEEeCCC
Confidence 35899999999999999999999 8 8999999863
No 399
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=93.12 E-value=0.097 Score=46.74 Aligned_cols=33 Identities=12% Similarity=0.049 Sum_probs=30.2
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
.+|+|||+|.-|.+.|..|++. | ++|+++++++
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~-g-----~~v~lie~~~ 35 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRA-R-----KNILLVDAGE 35 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECCC
T ss_pred CCEEEECCCHHHHHHHHHHHhC-C-----CCEEEEeCCC
Confidence 5899999999999999999999 8 8999999753
No 400
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=93.10 E-value=0.074 Score=50.49 Aligned_cols=33 Identities=24% Similarity=0.516 Sum_probs=30.9
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
.+|+|||+|..|.+.|..|++. | ++|+++++++
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~-G-----~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKS-G-----FKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTT-T-----CCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhC-C-----CCEEEEeCCC
Confidence 5899999999999999999999 8 8999999875
No 401
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=93.08 E-value=0.07 Score=49.69 Aligned_cols=33 Identities=12% Similarity=0.188 Sum_probs=30.5
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
..|+|||+|..|.+.|..|++. | ++|+++++..
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~-G-----~~V~vle~~~ 35 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRA-G-----LNVLMTDAHM 35 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHT-T-----CCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHHC-C-----CeEEEEecCC
Confidence 4799999999999999999999 8 8999999864
No 402
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=93.04 E-value=0.087 Score=49.75 Aligned_cols=33 Identities=21% Similarity=0.292 Sum_probs=30.8
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
..|+|||+|..|.+.|..|++. | ++|+++++..
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~-G-----~~V~vlE~~~ 37 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAER-G-----HRVLVLERHT 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHC-C-----CeEEEEeCCC
Confidence 5899999999999999999999 8 9999999865
No 403
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=93.03 E-value=0.085 Score=49.95 Aligned_cols=35 Identities=17% Similarity=0.323 Sum_probs=32.0
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
.++|+|||+|..|.++|..|++. | ++|+++++.+.
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~-G-----~~V~viE~~~~ 40 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQ-G-----HRVVVVEQARR 40 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-C-----CcEEEEeCCCC
Confidence 36899999999999999999999 8 99999998764
No 404
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=93.03 E-value=0.09 Score=48.13 Aligned_cols=33 Identities=15% Similarity=0.159 Sum_probs=30.5
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~ 81 (333)
..+|+|||+|.-|.+.|..|++. | ++|+++++.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~-g-----~~v~lie~~ 40 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRA-Q-----LSTLILEKG 40 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHHc-C-----CcEEEEeCC
Confidence 45899999999999999999998 8 899999987
No 405
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=93.03 E-value=0.14 Score=50.96 Aligned_cols=36 Identities=31% Similarity=0.376 Sum_probs=33.2
Q ss_pred CceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcc
Q 019978 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (333)
Q Consensus 43 ~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (333)
+|||.|.|+ |.+|+.++..|.+. | ++|+..+|++..
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~-G-----~~V~~l~R~~~~ 183 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTG-G-----HEVIQLVRKEPK 183 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT-T-----CEEEEEESSSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC-C-----CEEEEEECCCCC
Confidence 799999995 99999999999999 8 999999998764
No 406
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=92.96 E-value=0.2 Score=46.66 Aligned_cols=32 Identities=22% Similarity=0.321 Sum_probs=27.5
Q ss_pred ceEEEECCCH-HHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 019978 44 LRIVGVGAGA-WGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (333)
Q Consensus 44 ~kI~IIGaG~-mG~alA~~La~~~G~~~~~~~V~l~~r~ 81 (333)
+++.|||+|. +|..+|..|... | ..|++..+.
T Consensus 161 k~vvVvGrs~iVG~p~A~lL~~~-g-----AtVtv~h~~ 193 (285)
T 3p2o_A 161 KDAVIIGASNIVGRPMATMLLNA-G-----ATVSVCHIK 193 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT-T-----CEEEEECTT
T ss_pred CEEEEECCCchHHHHHHHHHHHC-C-----CeEEEEeCC
Confidence 7999999877 699999999998 7 788887543
No 407
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=92.95 E-value=0.09 Score=49.22 Aligned_cols=34 Identities=18% Similarity=0.231 Sum_probs=31.5
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
..|+|||+|..|.+.|..|++. | ++|+++++.+.
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~-G-----~~V~l~E~~~~ 38 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKY-G-----LKTLMIEKRPE 38 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEeCCCC
Confidence 4799999999999999999999 8 99999999873
No 408
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=92.95 E-value=0.095 Score=47.22 Aligned_cols=34 Identities=15% Similarity=0.203 Sum_probs=30.8
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEE-EecC
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRI-WRRP 81 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l-~~r~ 81 (333)
.+++|+|||+|.-|.+.|..|++. | ++|++ ++++
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~-g-----~~v~li~e~~ 37 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRG-G-----LKNVVMFEKG 37 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHH-T-----CSCEEEECSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHC-C-----CCeEEEEeCC
Confidence 457999999999999999999999 8 89999 8873
No 409
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=92.88 E-value=0.66 Score=44.64 Aligned_cols=41 Identities=17% Similarity=0.217 Sum_probs=29.6
Q ss_pred CHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCC--CEEEEeeecC
Q 019978 153 NLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITV--PVIISLAKGV 200 (333)
Q Consensus 153 d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~--~~Ivs~~kGi 200 (333)
+.++ +.++|+||+|+|...-.+.+..+.. . + +.||+++.-+
T Consensus 58 ~~~~-~~~~Dvvf~a~~~~~s~~~~~~~~~---~---G~k~~VID~ss~f 100 (370)
T 3pzr_A 58 DIES-LKQLDAVITCQGGSYTEKVYPALRQ---A---GWKGYWIDAASTL 100 (370)
T ss_dssp CHHH-HTTCSEEEECSCHHHHHHHHHHHHH---T---TCCCEEEECSSTT
T ss_pred ChhH-hccCCEEEECCChHHHHHHHHHHHH---C---CCCEEEEeCCchh
Confidence 4443 6799999999999888888777643 2 3 4788876543
No 410
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=92.87 E-value=0.088 Score=49.69 Aligned_cols=34 Identities=24% Similarity=0.377 Sum_probs=31.4
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
.+|+|||+|..|.++|..|++. | ++|+++++.+.
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~-G-----~~v~v~E~~~~ 36 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKA-G-----IDNVILERQTP 36 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-T-----CCEEEECSSCH
T ss_pred ccEEEECCCHHHHHHHHHHHHC-C-----CCEEEEeCCCC
Confidence 4799999999999999999999 8 99999998764
No 411
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=92.84 E-value=0.1 Score=49.75 Aligned_cols=34 Identities=21% Similarity=0.345 Sum_probs=31.5
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCee-EEEEecCCc
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGR 83 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~-V~l~~r~~~ 83 (333)
.+|+|||+|..|.++|..|++. | ++ |+++++.+.
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~-G-----~~~v~v~E~~~~ 39 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQA-G-----IGKVTLLESSSE 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CSEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC-C-----CCeEEEEECCCC
Confidence 5899999999999999999999 8 89 999999764
No 412
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=92.79 E-value=0.21 Score=46.80 Aligned_cols=32 Identities=16% Similarity=0.123 Sum_probs=27.6
Q ss_pred CceEEEECCCH-HHHHHHHHHHHhcCCCCCCeeEEEEec
Q 019978 43 PLRIVGVGAGA-WGSVFTAMLQDSYGYLRDKVLIRIWRR 80 (333)
Q Consensus 43 ~~kI~IIGaG~-mG~alA~~La~~~G~~~~~~~V~l~~r 80 (333)
.++++|||+|. +|..+|..|... | ..|++..+
T Consensus 165 gk~vvVIG~s~iVG~p~A~lL~~~-g-----AtVtv~hs 197 (301)
T 1a4i_A 165 GRHAVVVGRSKIVGAPMHDLLLWN-N-----ATVTTCHS 197 (301)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHT-T-----CEEEEECT
T ss_pred CCEEEEECCCchHHHHHHHHHHhC-C-----CeEEEEEC
Confidence 47999999995 799999999988 7 78888753
No 413
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=92.76 E-value=0.11 Score=49.74 Aligned_cols=34 Identities=29% Similarity=0.405 Sum_probs=31.5
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
|+|+|||+|..|.+.|..|++. | ++|+++++++.
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~-g-----~~v~v~E~~~~ 37 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEK-G-----HQVHIIDQRDH 37 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-T-----CEEEEEESSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-C-----CcEEEEEecCC
Confidence 7999999999999999999998 8 99999998764
No 414
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=92.73 E-value=0.16 Score=50.35 Aligned_cols=37 Identities=19% Similarity=0.155 Sum_probs=32.9
Q ss_pred CCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 41 ~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
....+|+|||+|..|.++|..|++. | .+|+++++.+.
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~-G-----~~V~liEk~~~ 126 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALL-G-----ARVVLVEKRIK 126 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESCSS
T ss_pred cCCCCEEEECccHHHHHHHHHHHHC-C-----CeEEEEEeccc
Confidence 3457999999999999999999999 8 99999998753
No 415
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=92.72 E-value=0.12 Score=48.04 Aligned_cols=49 Identities=20% Similarity=0.159 Sum_probs=39.6
Q ss_pred HHhhhHHHHhhccCCCCCceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 26 EERLDELRRLMGKAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
++....+.+.+.+. +|+|.|.|+ |.+|+.++..|++. | ++|++.+|++.
T Consensus 13 ~~~~~~~~~~~~~~---~~~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~ 62 (352)
T 1sb8_A 13 MSRYEELRKELPAQ---PKVWLITGVAGFIGSNLLETLLKL-D-----QKVVGLDNFAT 62 (352)
T ss_dssp CCHHHHHHHHHHHS---CCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEECCSS
T ss_pred HHHHHhhchhcCcc---CCeEEEECCCcHHHHHHHHHHHHC-C-----CEEEEEeCCCc
Confidence 44555666655543 479999998 99999999999999 8 99999999764
No 416
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=92.71 E-value=0.11 Score=52.26 Aligned_cols=41 Identities=10% Similarity=-0.010 Sum_probs=35.7
Q ss_pred CCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhh
Q 019978 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (333)
Q Consensus 41 ~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (333)
...++|.|+|+|.+|..++..|.+. | ++|++++.+++.+++
T Consensus 125 ~~~~hviI~G~g~~g~~la~~L~~~-~-----~~vvvid~~~~~~~~ 165 (565)
T 4gx0_A 125 DTRGHILIFGIDPITRTLIRKLESR-N-----HLFVVVTDNYDQALH 165 (565)
T ss_dssp TCCSCEEEESCCHHHHHHHHHTTTT-T-----CCEEEEESCHHHHHH
T ss_pred ccCCeEEEECCChHHHHHHHHHHHC-C-----CCEEEEECCHHHHHH
Confidence 3457899999999999999999988 7 999999999876543
No 417
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=92.71 E-value=0.22 Score=46.36 Aligned_cols=31 Identities=23% Similarity=0.274 Sum_probs=26.8
Q ss_pred ceEEEECCCH-HHHHHHHHHHHhcCCCCCCeeEEEEec
Q 019978 44 LRIVGVGAGA-WGSVFTAMLQDSYGYLRDKVLIRIWRR 80 (333)
Q Consensus 44 ~kI~IIGaG~-mG~alA~~La~~~G~~~~~~~V~l~~r 80 (333)
+++.|||+|. +|..+|..|... | ..|++..+
T Consensus 162 k~vvVIG~s~iVG~p~A~lL~~~-g-----AtVtv~hs 193 (285)
T 3l07_A 162 AYAVVVGASNVVGKPVSQLLLNA-K-----ATVTTCHR 193 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT-T-----CEEEEECT
T ss_pred CEEEEECCCchhHHHHHHHHHHC-C-----CeEEEEeC
Confidence 6999999877 799999999988 7 78888754
No 418
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=92.68 E-value=0.089 Score=52.78 Aligned_cols=36 Identities=14% Similarity=0.149 Sum_probs=32.4
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (333)
...|.|||+|..|.++|..|++. | .+|+++++.+..
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~-G-----~~V~vlEr~~~~ 61 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHR-Q-----VGHLVVEQTDGT 61 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSCSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEeCCCCC
Confidence 35899999999999999999999 8 999999987643
No 419
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=92.66 E-value=0.25 Score=46.84 Aligned_cols=22 Identities=23% Similarity=0.265 Sum_probs=20.5
Q ss_pred ceEEEECCCHHHHHHHHHHHHh
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDS 65 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~ 65 (333)
+||+|+|+|.+|..+++.|.++
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~ 25 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNS 25 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH
T ss_pred eEEEEEccCHHHHHHHHHHHcC
Confidence 5999999999999999999876
No 420
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=92.65 E-value=0.17 Score=47.16 Aligned_cols=33 Identities=24% Similarity=0.221 Sum_probs=28.0
Q ss_pred CceEEEECCCH-HHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 019978 43 PLRIVGVGAGA-WGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (333)
Q Consensus 43 ~~kI~IIGaG~-mG~alA~~La~~~G~~~~~~~V~l~~r~ 81 (333)
.++++|||+|. +|..+|..|... | ..|++..+.
T Consensus 159 gk~vvVIG~s~iVG~p~A~lL~~~-g-----AtVtv~hs~ 192 (288)
T 1b0a_A 159 GLNAVVIGASNIVGRPMSMELLLA-G-----CTTTVTHRF 192 (288)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTT-T-----CEEEEECSS
T ss_pred CCEEEEECCChHHHHHHHHHHHHC-C-----CeEEEEeCC
Confidence 47999999996 699999999988 7 788887543
No 421
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=92.61 E-value=0.18 Score=49.56 Aligned_cols=36 Identities=25% Similarity=0.335 Sum_probs=32.5
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
..++|+|||+|.-|.+.|..|++. | ++|+++++.+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~-G-----~~V~v~e~~~~ 156 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK-G-----YEVHVYDRYDR 156 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-T-----CCEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-C-----CeEEEEeccCC
Confidence 347899999999999999999999 8 99999998764
No 422
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=92.60 E-value=0.099 Score=50.58 Aligned_cols=33 Identities=15% Similarity=0.152 Sum_probs=30.3
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCe--eEEEEecCC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPG 82 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~--~V~l~~r~~ 82 (333)
++|+|||+|..|.+.|..|++. | + +|+++.++.
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~-G-----~~~~V~vlEa~~ 37 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRA-P-----CPPKVVLVESSE 37 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTS-S-----SCCEEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhC-C-----CCCcEEEEeCCC
Confidence 6899999999999999999999 8 8 999998754
No 423
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=92.59 E-value=0.12 Score=47.43 Aligned_cols=64 Identities=19% Similarity=0.006 Sum_probs=45.1
Q ss_pred cccccccccchHHhhhHHHHhhccCCCCCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhh
Q 019978 15 NGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (333)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (333)
.|-++-+|-...--+.++++. +.. -..+++.|+|+|.+|.+++..|++. + +|++++|+.+++++
T Consensus 102 ~g~l~g~nTd~~G~~~~L~~~-~~~-l~~k~vlV~GaGgiG~aia~~L~~~------G-~V~v~~r~~~~~~~ 165 (287)
T 1nvt_A 102 DGKAIGYNTDGIGARMALEEE-IGR-VKDKNIVIYGAGGAARAVAFELAKD------N-NIIIANRTVEKAEA 165 (287)
T ss_dssp TTEEEEECCHHHHHHHHHHHH-HCC-CCSCEEEEECCSHHHHHHHHHHTSS------S-EEEEECSSHHHHHH
T ss_pred CCEEEEecCCHHHHHHHHHHh-CCC-cCCCEEEEECchHHHHHHHHHHHHC------C-CEEEEECCHHHHHH
Confidence 444445566555556666542 221 2236899999999999999999877 4 89999999876543
No 424
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=92.59 E-value=0.14 Score=43.57 Aligned_cols=35 Identities=23% Similarity=0.343 Sum_probs=31.2
Q ss_pred CCceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 42 ~~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
++|||.|.|+ |.+|.+++..|+ . | ++|++.+|+++
T Consensus 2 ~kM~vlVtGasg~iG~~~~~~l~-~-g-----~~V~~~~r~~~ 37 (202)
T 3d7l_A 2 NAMKILLIGASGTLGSAVKERLE-K-K-----AEVITAGRHSG 37 (202)
T ss_dssp CSCEEEEETTTSHHHHHHHHHHT-T-T-----SEEEEEESSSS
T ss_pred CCcEEEEEcCCcHHHHHHHHHHH-C-C-----CeEEEEecCcc
Confidence 4579999996 999999999999 8 8 99999999864
No 425
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=92.53 E-value=0.67 Score=44.47 Aligned_cols=41 Identities=17% Similarity=0.260 Sum_probs=29.5
Q ss_pred CHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCC--CEEEEeeecC
Q 019978 153 NLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITV--PVIISLAKGV 200 (333)
Q Consensus 153 d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~--~~Ivs~~kGi 200 (333)
+.++ +.++|+||+|+|.....+.+..+.. . + .+||+.+.-+
T Consensus 59 ~~~~-~~~~DvVf~a~g~~~s~~~a~~~~~---~---G~k~vVID~ss~~ 101 (367)
T 1t4b_A 59 DLEA-LKALDIIVTCQGGDYTNEIYPKLRE---S---GWQGYWIDAASSL 101 (367)
T ss_dssp CHHH-HHTCSEEEECSCHHHHHHHHHHHHH---T---TCCCEEEECSSTT
T ss_pred ChHH-hcCCCEEEECCCchhHHHHHHHHHH---C---CCCEEEEcCChhh
Confidence 4444 5689999999998888887777654 2 3 3788876544
No 426
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=92.52 E-value=0.17 Score=47.39 Aligned_cols=32 Identities=22% Similarity=0.262 Sum_probs=28.2
Q ss_pred ceEEEECCCH-HHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 019978 44 LRIVGVGAGA-WGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (333)
Q Consensus 44 ~kI~IIGaG~-mG~alA~~La~~~G~~~~~~~V~l~~r~ 81 (333)
+++.|||.|. +|..+|..|... | ..|+++.+.
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~-g-----AtVtv~~~~ 198 (300)
T 4a26_A 166 KRAVVLGRSNIVGAPVAALLMKE-N-----ATVTIVHSG 198 (300)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT-T-----CEEEEECTT
T ss_pred CEEEEECCCchHHHHHHHHHHHC-C-----CeEEEEeCC
Confidence 6999999876 799999999998 7 889988764
No 427
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=92.51 E-value=0.17 Score=50.41 Aligned_cols=35 Identities=26% Similarity=0.160 Sum_probs=32.2
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
..++|+|||+|.-|.+.|..|++. | ++|+++++++
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~-G-----~~V~liE~~~ 76 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAM-G-----GRQLIVDRWP 76 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-C-----CCEEEEeCCC
Confidence 347899999999999999999998 8 9999999986
No 428
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=92.48 E-value=0.14 Score=46.37 Aligned_cols=36 Identities=25% Similarity=0.298 Sum_probs=32.6
Q ss_pred ceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcch
Q 019978 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (333)
Q Consensus 44 ~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (333)
|||.|.|+ |.+|+.++..|.+. | ++|++.+|+++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~~~ 37 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVEL-G-----YEVVVVDNLSSGR 37 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEECCCSSCC
T ss_pred CEEEEECCCChHHHHHHHHHHhC-C-----CEEEEEeCCCCCc
Confidence 78999998 99999999999999 8 9999999987543
No 429
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=92.39 E-value=0.13 Score=51.03 Aligned_cols=36 Identities=22% Similarity=0.323 Sum_probs=32.5
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (333)
.++|.|||+|..|.++|..|++. | ++|+++++.+..
T Consensus 12 ~~dVlIVGaGpaGl~~A~~La~~-G-----~~v~vlE~~~~~ 47 (499)
T 2qa2_A 12 DASVIVVGAGPAGLMLAGELRLG-G-----VDVMVLEQLPQR 47 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESCSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEECCCCC
Confidence 36899999999999999999999 8 999999987653
No 430
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=92.39 E-value=0.4 Score=52.03 Aligned_cols=55 Identities=18% Similarity=0.147 Sum_probs=39.5
Q ss_pred HhhhHHHHhhccCCCC---CceEEEECCCHHHHHHHHHHHHhcCC-CCCCeeEEEEecCC
Q 019978 27 ERLDELRRLMGKAEGD---PLRIVGVGAGAWGSVFTAMLQDSYGY-LRDKVLIRIWRRPG 82 (333)
Q Consensus 27 ~~~~~~~~~~~~~~~~---~~kI~IIGaG~mG~alA~~La~~~G~-~~~~~~V~l~~r~~ 82 (333)
+|.+...++.|...-. ..||.|||+|.+|+.++..|+.. |. ..++-+++++|.+.
T Consensus 406 ~Ry~rq~~l~G~~~q~kL~~~~VlvVGaGGlGsevlk~La~~-Gv~~g~~G~i~lvD~D~ 464 (1015)
T 3cmm_A 406 SRYDNQIAVFGLDFQKKIANSKVFLVGSGAIGCEMLKNWALL-GLGSGSDGYIVVTDNDS 464 (1015)
T ss_dssp STTHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHH-TTTCSTTCEEEEECCCB
T ss_pred hhhhhHHHhcCHHHHHHHhcCeEEEEecCHHHHHHHHHHHHc-CcCcCCCCeEEEEeCCE
Confidence 5666666666643322 36999999999999999999999 81 11112799998775
No 431
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=92.34 E-value=0.13 Score=50.42 Aligned_cols=35 Identities=11% Similarity=0.191 Sum_probs=31.8
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
.+||.|||.|..|.+.|..|.+. | ++|+++|+++.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~-G-----~~V~~~D~~~~ 43 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKL-G-----AIVTVNDGKPF 43 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHT-T-----CEEEEEESSCG
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-C-----CEEEEEeCCcc
Confidence 36999999999999999999999 8 99999999763
No 432
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=92.32 E-value=0.14 Score=46.43 Aligned_cols=35 Identities=23% Similarity=0.241 Sum_probs=32.3
Q ss_pred CceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 43 ~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
+|+|.|.|+ |.+|+.++..|.+. | ++|++.+|++.
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVAS-G-----EEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-T-----CCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHC-C-----CEEEEEecCCc
Confidence 479999998 99999999999999 8 99999999875
No 433
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=92.24 E-value=0.31 Score=46.25 Aligned_cols=23 Identities=30% Similarity=0.683 Sum_probs=20.4
Q ss_pred CceEEEEC-CCHHHHHHHHHHHHh
Q 019978 43 PLRIVGVG-AGAWGSVFTAMLQDS 65 (333)
Q Consensus 43 ~~kI~IIG-aG~mG~alA~~La~~ 65 (333)
+|||+|+| .|.+|..+...|.++
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~ 29 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDER 29 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHT
T ss_pred CcEEEEECCCCHHHHHHHHHHHhC
Confidence 37999999 599999999999865
No 434
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=92.23 E-value=0.13 Score=47.76 Aligned_cols=33 Identities=27% Similarity=0.373 Sum_probs=30.6
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCe-eEEEEecCC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPG 82 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~-~V~l~~r~~ 82 (333)
++|+|||+|..|.+.|..|++. | + +|+++++++
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~-g-----~~~v~lie~~~ 38 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDF-G-----ITDVIILEKGT 38 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-T-----CCCEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHc-C-----CCcEEEEecCC
Confidence 6899999999999999999998 8 8 899999874
No 435
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=92.20 E-value=0.13 Score=47.64 Aligned_cols=38 Identities=18% Similarity=0.252 Sum_probs=30.3
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCC-CCCeeEEEEecCC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYL-RDKVLIRIWRRPG 82 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~-~~~~~V~l~~r~~ 82 (333)
|.|+|||+|..|.+.|..|++. |.. .++++|+++++..
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~-G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHER-YHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-HTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHh-ccccCCCceEEEEECCC
Confidence 6899999999999999999998 400 0116899999874
No 436
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=92.16 E-value=0.17 Score=44.35 Aligned_cols=36 Identities=17% Similarity=0.207 Sum_probs=32.2
Q ss_pred ceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcch
Q 019978 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (333)
Q Consensus 44 ~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (333)
++|.|.|+ |.+|.+++..|++. | ++|++.+|+++..
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~-g-----~~V~~~~r~~~~~ 38 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARA-G-----HTVIGIDRGQADI 38 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESSSSSE
T ss_pred cEEEEeCCCcHHHHHHHHHHHhC-C-----CEEEEEeCChhHc
Confidence 57999997 99999999999999 8 9999999987643
No 437
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=92.16 E-value=0.13 Score=49.09 Aligned_cols=33 Identities=18% Similarity=0.182 Sum_probs=30.4
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
++|+|||+|..|.+.|..|++. | ++|+++.++.
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~-G-----~~V~vlE~~~ 34 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNA-G-----KKVLLLEGGE 34 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHc-C-----CeEEEEecCC
Confidence 5899999999999999999999 8 9999998754
No 438
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=92.16 E-value=1.2 Score=35.62 Aligned_cols=36 Identities=17% Similarity=0.131 Sum_probs=27.1
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEE-EecCC
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRI-WRRPG 82 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l-~~r~~ 82 (333)
..+++.|+|+|..|..++..+.++.| ++|.. ++.++
T Consensus 3 ~~~~vlIiGaG~~g~~l~~~l~~~~g-----~~vvg~~d~~~ 39 (141)
T 3nkl_A 3 AKKKVLIYGAGSAGLQLANMLRQGKE-----FHPIAFIDDDR 39 (141)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHSSS-----EEEEEEECSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-----cEEEEEEECCc
Confidence 34689999999999999999977523 77664 44443
No 439
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=92.12 E-value=0.15 Score=46.63 Aligned_cols=35 Identities=20% Similarity=0.150 Sum_probs=31.6
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
.++|+|||+|.-|.+.|..|++. | ++|+++++++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~-g-----~~v~lie~~~~ 39 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMR-G-----LSFRFVDPLPE 39 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESSSS
T ss_pred cCcEEEECCCHHHHHHHHHHHhC-C-----CCEEEEeCCCC
Confidence 46899999999999999999998 8 99999998753
No 440
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=92.09 E-value=1.3 Score=44.65 Aligned_cols=50 Identities=20% Similarity=0.159 Sum_probs=37.5
Q ss_pred hhhHHHHhhccCCCC---CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 28 RLDELRRLMGKAEGD---PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 28 ~~~~~~~~~~~~~~~---~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
|.+.-.++.|...-. ..||.|||+|..|+.++..|+.. |. -+++++|.+.
T Consensus 14 rY~Rqi~l~G~~~q~~L~~~~VlvvG~GGlGseiak~La~a-GV----g~itlvD~D~ 66 (531)
T 1tt5_A 14 KYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLP-GI----GSFTIIDGNQ 66 (531)
T ss_dssp HTHHHHHHHHHHHHHHHHHCEEEEECCSHHHHHHHHHHHTT-TC----SEEEEECCCB
T ss_pred HhhHHHHhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHc-CC----CeEEEEeCCE
Confidence 555555555533211 26999999999999999999999 82 4789998775
No 441
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=92.08 E-value=0.15 Score=50.82 Aligned_cols=34 Identities=24% Similarity=0.208 Sum_probs=31.0
Q ss_pred CceEEEECCCHHHHHHHHHHHH---hcCCCCCCeeEEEEecCC
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQD---SYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~---~~G~~~~~~~V~l~~r~~ 82 (333)
+.+|+|||+|..|.+.|..|++ . | ++|+++++.+
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~-G-----~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQ-Q-----ANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCS-S-----CEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCC-C-----CEEEEECCCC
Confidence 4689999999999999999999 8 7 9999999854
No 442
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=91.99 E-value=0.11 Score=51.06 Aligned_cols=33 Identities=18% Similarity=0.242 Sum_probs=29.4
Q ss_pred ceEEEECCCHHHHHHHHHHHH---hcCCCCCCeeEEEEecCC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQD---SYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~---~~G~~~~~~~V~l~~r~~ 82 (333)
.+|+|||+|..|.+.|..|++ . | ++|+++.+.+
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~-G-----~~V~lvE~~~ 38 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDD-R-----IDVTLVESGN 38 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGG-G-----SEEEEEEC--
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCC-C-----CEEEEEecCC
Confidence 589999999999999999999 8 8 8999998864
No 443
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=91.98 E-value=0.089 Score=47.16 Aligned_cols=37 Identities=22% Similarity=0.200 Sum_probs=31.1
Q ss_pred ceEEEECC-CHHHHHHHHHHHHhc-CCCCCCeeEEEEecCCcch
Q 019978 44 LRIVGVGA-GAWGSVFTAMLQDSY-GYLRDKVLIRIWRRPGRSV 85 (333)
Q Consensus 44 ~kI~IIGa-G~mG~alA~~La~~~-G~~~~~~~V~l~~r~~~~~ 85 (333)
|+|.|.|+ |.+|+.++..|.+.. | ++|++.+|+++..
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g-----~~V~~~~r~~~~~ 39 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPA-----SQIIAIVRNVEKA 39 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCG-----GGEEEEESCTTTT
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCC-----CeEEEEEcCHHHH
Confidence 58999997 999999999998741 3 8999999987654
No 444
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=91.98 E-value=0.13 Score=52.18 Aligned_cols=34 Identities=24% Similarity=0.316 Sum_probs=30.8
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
..|+|||+|..|.++|..|++. | ++|+++++.+.
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~-G-----~~V~VlEr~~~ 83 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAG-G-----VGALVLEKLVE 83 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHT-T-----CCEEEEBSCSS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEcCCCC
Confidence 3799999999999999999999 8 99999998764
No 445
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=91.97 E-value=0.14 Score=46.51 Aligned_cols=35 Identities=14% Similarity=0.065 Sum_probs=31.7
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
+.+|+|||+|.-|.+.|..|++. | ++|+++++++.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-g-----~~v~lie~~~~ 41 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMR-Q-----ASVKIIESLPQ 41 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHC-C-----CCEEEEEcCCC
Confidence 35899999999999999999998 8 99999999763
No 446
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=91.97 E-value=0.33 Score=44.90 Aligned_cols=34 Identities=21% Similarity=0.186 Sum_probs=31.2
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
-++|.|||+|..|..-+..|.+. | ++|++++.+.
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~-G-----a~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPT-G-----CKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGG-T-----CEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhC-C-----CEEEEEcCCC
Confidence 37999999999999999999999 8 9999998764
No 447
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=91.97 E-value=0.24 Score=48.81 Aligned_cols=32 Identities=31% Similarity=0.539 Sum_probs=29.7
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCe---eEEEEe----cC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKV---LIRIWR----RP 81 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~---~V~l~~----r~ 81 (333)
.||.|+|||..|.+++..|... | . +|++++ |+
T Consensus 187 ~rvlvlGAGgAg~aia~~L~~~-G-----~~~~~I~vvd~~~~R~ 225 (439)
T 2dvm_A 187 ITLALFGAGAAGFATLRILTEA-G-----VKPENVRVVELVNGKP 225 (439)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-T-----CCGGGEEEEEEETTEE
T ss_pred CEEEEECccHHHHHHHHHHHHc-C-----CCcCeEEEEEccCCCc
Confidence 6999999999999999999998 8 6 799999 87
No 448
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=91.94 E-value=0.14 Score=46.72 Aligned_cols=34 Identities=24% Similarity=0.302 Sum_probs=31.3
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
.+|+|||+|..|.+.|..|++. | ++|+++++++.
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~-g-----~~v~vie~~~~ 37 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRS-G-----LSYVILDAEAS 37 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHS-S-----CCEEEECCSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEECCCC
Confidence 5899999999999999999999 8 89999998764
No 449
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=91.94 E-value=0.19 Score=50.75 Aligned_cols=34 Identities=18% Similarity=0.258 Sum_probs=31.1
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
...|.|||+|..|.++|..|++. | ++|.++++..
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~r-G-----~~V~LlE~~~ 65 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAAS-G-----IKTGLIEMQD 65 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-C-----CcEEEEeCCC
Confidence 46899999999999999999999 8 8999998764
No 450
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=91.90 E-value=0.15 Score=47.05 Aligned_cols=36 Identities=22% Similarity=0.275 Sum_probs=31.1
Q ss_pred CCceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 42 ~~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
..|+|.|.|+ |.+|+.++..|.+. | ++|++++|+++
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~-G-----~~V~~~~r~~~ 54 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQ-G-----RTVRGFDLRPS 54 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHT-T-----CCEEEEESSCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhC-C-----CEEEEEeCCCC
Confidence 3479999998 99999999999999 8 99999999875
No 451
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=91.88 E-value=0.18 Score=46.03 Aligned_cols=35 Identities=23% Similarity=0.191 Sum_probs=31.1
Q ss_pred CceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 43 ~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
||+|.|.|+ |.+|+.++..|.+. | ++|++.+|+..
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~ 36 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDE-G-----LSVVVVDNLQT 36 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEECCSS
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC-C-----CEEEEEeCCCc
Confidence 579999996 99999999999999 8 99999998764
No 452
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=91.87 E-value=0.8 Score=44.16 Aligned_cols=41 Identities=17% Similarity=0.252 Sum_probs=29.8
Q ss_pred CHHHHhcCCCEEEEecCchhHHHHHHHHHhhhhccCCC--CEEEEeeecC
Q 019978 153 NLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITV--PVIISLAKGV 200 (333)
Q Consensus 153 d~~ea~~~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~--~~Ivs~~kGi 200 (333)
+.+ .+.++|+||+|+|...-.+++..+.. . + +.||+++.-+
T Consensus 62 ~~~-~~~~vDvvf~a~~~~~s~~~~~~~~~---~---G~k~~VID~ss~f 104 (377)
T 3uw3_A 62 SID-DLKKCDVIITCQGGDYTNDVFPKLRA---A---GWNGYWIDAASSL 104 (377)
T ss_dssp CHH-HHHTCSEEEECSCHHHHHHHHHHHHH---T---TCCSEEEECSSTT
T ss_pred Chh-HhcCCCEEEECCChHHHHHHHHHHHH---C---CCCEEEEeCCccc
Confidence 443 35789999999999888888877643 2 3 3788877543
No 453
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=91.85 E-value=0.28 Score=45.63 Aligned_cols=31 Identities=26% Similarity=0.294 Sum_probs=26.7
Q ss_pred ceEEEECCCH-HHHHHHHHHHHhcCCCCCCeeEEEEec
Q 019978 44 LRIVGVGAGA-WGSVFTAMLQDSYGYLRDKVLIRIWRR 80 (333)
Q Consensus 44 ~kI~IIGaG~-mG~alA~~La~~~G~~~~~~~V~l~~r 80 (333)
++++|||.|. +|..+|..|... | ..|++..+
T Consensus 162 k~vvVvGrs~iVG~plA~lL~~~-g-----AtVtv~hs 193 (286)
T 4a5o_A 162 MDAVVVGASNIVGRPMALELLLG-G-----CTVTVTHR 193 (286)
T ss_dssp CEEEEECTTSTTHHHHHHHHHHT-T-----CEEEEECT
T ss_pred CEEEEECCCchhHHHHHHHHHHC-C-----CeEEEEeC
Confidence 6999999865 899999999988 7 78888754
No 454
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=91.60 E-value=0.16 Score=45.87 Aligned_cols=37 Identities=19% Similarity=0.244 Sum_probs=32.4
Q ss_pred ceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 44 ~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
++|.|.|+ |.+|.+++..|++. | ++|++.+|+++..+
T Consensus 33 k~vlVTGasggIG~~la~~l~~~-G-----~~V~~~~r~~~~~~ 70 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQ-G-----LKVVGCARTVGNIE 70 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHC-C-----CEEEEEECChHHHH
Confidence 57899986 99999999999999 8 89999999876543
No 455
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=91.60 E-value=0.12 Score=47.92 Aligned_cols=33 Identities=18% Similarity=0.177 Sum_probs=30.1
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
.++|+|||+|..|.+.|..|+ . | ++|+++++.+
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~-G-----~~V~vlE~~~ 41 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-A-H-----GRVVVLEREA 41 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-T-T-----SCEEEECSSS
T ss_pred cCCEEEECCcHHHHHHHHHHh-C-C-----CCEEEEECCC
Confidence 368999999999999999999 7 7 8999999875
No 456
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=91.60 E-value=0.3 Score=47.58 Aligned_cols=35 Identities=26% Similarity=0.372 Sum_probs=31.6
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
.+++|+|||+|..|.+.|..|++. | ++|+++.++.
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~-g-----~~v~vlE~~~ 66 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGA-G-----HQVTVLEASE 66 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHH-T-----CEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-C-----CeEEEEECCC
Confidence 357999999999999999999999 8 8999998764
No 457
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=91.59 E-value=0.1 Score=46.75 Aligned_cols=38 Identities=18% Similarity=0.084 Sum_probs=33.1
Q ss_pred CceEEEECC-C-HHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 43 PLRIVGVGA-G-AWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 43 ~~kI~IIGa-G-~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
.+++.|.|+ | .+|.+++..|++. | ++|.+.+|+.+..+
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~-G-----~~V~~~~r~~~~~~ 61 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLE-G-----ADVVISDYHERRLG 61 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHT-T-----CEEEEEESCHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHC-C-----CEEEEecCCHHHHH
Confidence 368999998 8 4999999999999 8 89999999986554
No 458
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=91.57 E-value=0.15 Score=50.61 Aligned_cols=35 Identities=23% Similarity=0.334 Sum_probs=31.3
Q ss_pred CCceEEEECCCHHHHHHHHHHHH------------hcCCCCCCeeEEEEecCC
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQD------------SYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~------------~~G~~~~~~~V~l~~r~~ 82 (333)
...+|+|||+|.-|.+.|..|++ . | ++|+++.+++
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~-G-----~~V~liE~~~ 52 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSP-K-----LNITLIESPD 52 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSC-S-----CEEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCC-C-----CeEEEEeCCC
Confidence 34689999999999999999999 7 7 9999999864
No 459
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=91.50 E-value=0.22 Score=46.01 Aligned_cols=36 Identities=28% Similarity=0.211 Sum_probs=31.9
Q ss_pred CCceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 42 ~~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
.+|+|.|.|+ |.+|..++..|.+. | ++|++.+|+..
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~ 62 (343)
T 2b69_A 26 DRKRILITGGAGFVGSHLTDKLMMD-G-----HEVTVVDNFFT 62 (343)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEECCSS
T ss_pred CCCEEEEEcCccHHHHHHHHHHHHC-C-----CEEEEEeCCCc
Confidence 4589999998 99999999999999 8 99999999754
No 460
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=91.40 E-value=0.2 Score=46.56 Aligned_cols=35 Identities=14% Similarity=0.071 Sum_probs=31.4
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
..+|+|||+|.-|.+.|..|++. | ++|+++++.+.
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~-g-----~~v~lie~~~~ 48 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMN-N-----ISCRIIESMPQ 48 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-C-----CCEEEEecCCC
Confidence 36899999999999999999998 8 89999998753
No 461
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=91.39 E-value=0.82 Score=49.62 Aligned_cols=34 Identities=9% Similarity=0.120 Sum_probs=30.4
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
.+|.|||+|..|+.+|..|+.. |. -.++++|.+.
T Consensus 28 s~VlIvG~GGlGseiak~La~a-GV----g~itlvD~D~ 61 (1015)
T 3cmm_A 28 SNVLILGLKGLGVEIAKNVVLA-GV----KSMTVFDPEP 61 (1015)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-CC----SEEEEECCSB
T ss_pred CEEEEECCChHHHHHHHHHHHc-CC----CeEEEecCCE
Confidence 6999999999999999999999 82 4799998874
No 462
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=91.39 E-value=0.25 Score=44.20 Aligned_cols=38 Identities=16% Similarity=0.247 Sum_probs=33.1
Q ss_pred ceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhh
Q 019978 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (333)
Q Consensus 44 ~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (333)
+++.|.|+ |.+|.++|..|++. | ++|.+.+|+++.+++
T Consensus 9 k~~lVTGas~gIG~a~a~~l~~~-G-----~~V~~~~r~~~~~~~ 47 (255)
T 4eso_A 9 KKAIVIGGTHGMGLATVRRLVEG-G-----AEVLLTGRNESNIAR 47 (255)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHH
Confidence 67889996 89999999999999 8 999999999865543
No 463
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=91.36 E-value=0.21 Score=44.73 Aligned_cols=39 Identities=18% Similarity=0.139 Sum_probs=33.6
Q ss_pred CceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhh
Q 019978 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (333)
Q Consensus 43 ~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (333)
.++|.|.|+ |.+|.++|..|++. | ++|.+.+|+++.+++
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~-G-----~~V~~~~r~~~~~~~ 68 (262)
T 3rkr_A 29 GQVAVVTGASRGIGAAIARKLGSL-G-----ARVVLTARDVEKLRA 68 (262)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-C-----CEEEEEECCHHHHHH
Confidence 368889996 99999999999999 8 899999999876543
No 464
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=91.23 E-value=0.2 Score=50.21 Aligned_cols=37 Identities=22% Similarity=0.243 Sum_probs=31.8
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
+++.|+|+|-+|.+++..|++. | .+|++++|+.++++
T Consensus 365 k~vlV~GaGGig~aia~~L~~~-G-----~~V~i~~R~~~~a~ 401 (523)
T 2o7s_A 365 KTVVVIGAGGAGKALAYGAKEK-G-----AKVVIANRTYERAL 401 (523)
T ss_dssp -CEEEECCSHHHHHHHHHHHHH-C-----C-CEEEESSHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHC-C-----CEEEEEECCHHHHH
Confidence 5799999999999999999999 8 88999999976654
No 465
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=91.17 E-value=0.19 Score=45.39 Aligned_cols=32 Identities=16% Similarity=0.212 Sum_probs=29.8
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCe-eEEEEecC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRP 81 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~-~V~l~~r~ 81 (333)
++|+|||+|.-|.+.|..|++. | + +|++++++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-g-----~~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRG-G-----VKNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-T-----CSSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHHC-C-----CCcEEEEcCC
Confidence 5899999999999999999998 8 8 99999885
No 466
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=91.13 E-value=0.19 Score=48.80 Aligned_cols=34 Identities=12% Similarity=0.282 Sum_probs=31.3
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
..|+|||+|..|.+.|..|++. | .+|+++++.+.
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~-G-----~~V~llEk~~~ 60 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEE-G-----ANVLLLDKGNK 60 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHC-C-----CCEEEEECCCC
Confidence 5799999999999999999999 8 89999998764
No 467
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=91.05 E-value=0.19 Score=43.99 Aligned_cols=37 Identities=19% Similarity=0.232 Sum_probs=31.8
Q ss_pred ceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 44 ~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
++|.|.|+ |.+|.++|..|++. | ++|.+.+|+++.++
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~-G-----~~V~~~~r~~~~~~ 39 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAE-G-----KATYLTGRSESKLS 39 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHT-T-----CCEEEEESCHHHHH
T ss_pred CEEEEecCCchHHHHHHHHHHHC-C-----CEEEEEeCCHHHHH
Confidence 46889996 89999999999999 8 89999999986554
No 468
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=90.99 E-value=0.23 Score=50.54 Aligned_cols=33 Identities=27% Similarity=0.415 Sum_probs=30.9
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
.+|+|||+|..|.+.|..|++. | ++|+++++.+
T Consensus 24 ~DVvIVGgG~AGl~aA~~Lar~-G-----~~V~LiEr~~ 56 (591)
T 3i3l_A 24 SKVAIIGGGPAGSVAGLTLHKL-G-----HDVTIYERSA 56 (591)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHcC-C-----CCEEEEcCCC
Confidence 6899999999999999999999 8 9999999874
No 469
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=90.97 E-value=0.25 Score=44.94 Aligned_cols=37 Identities=16% Similarity=0.134 Sum_probs=32.6
Q ss_pred ceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 44 ~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
++|.|.|+ |.+|.+++..|++. | ++|++.+|+++..+
T Consensus 19 k~vlVTGasggIG~~la~~l~~~-G-----~~V~~~~r~~~~~~ 56 (303)
T 1yxm_A 19 QVAIVTGGATGIGKAIVKELLEL-G-----SNVVIASRKLERLK 56 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHH
Confidence 67999996 99999999999999 8 99999999876543
No 470
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=90.97 E-value=0.28 Score=47.72 Aligned_cols=34 Identities=21% Similarity=0.262 Sum_probs=31.0
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
.++|+|||+|..|.+.|..|++. | ++|+++.+..
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~-g-----~~v~v~E~~~ 44 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKA-G-----YKVTVLEART 44 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-C-----CCEEEEeccC
Confidence 47999999999999999999999 8 8999998764
No 471
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=90.97 E-value=0.18 Score=46.00 Aligned_cols=38 Identities=18% Similarity=0.140 Sum_probs=32.8
Q ss_pred ceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhh
Q 019978 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (333)
Q Consensus 44 ~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (333)
+++.|.|+ |.+|.++|..|++. | ++|.+.+|+++.+++
T Consensus 34 k~~lVTGas~GIG~aia~~la~~-G-----~~V~~~~r~~~~~~~ 72 (281)
T 4dry_A 34 RIALVTGGGTGVGRGIAQALSAE-G-----YSVVITGRRPDVLDA 72 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC-C-----CEEEEEECCHHHHHH
Confidence 57888886 89999999999999 8 899999999876543
No 472
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=90.96 E-value=0.12 Score=47.37 Aligned_cols=31 Identities=13% Similarity=0.142 Sum_probs=29.4
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEec
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRR 80 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r 80 (333)
++|+|||+|..|.+.|..|++. | ++|+++++
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~-g-----~~v~lie~ 39 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARA-E-----LKPLLFEG 39 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-T-----CCCEEECC
T ss_pred CCEEEECcCHHHHHHHHHHHHC-C-----CeEEEEec
Confidence 6899999999999999999998 8 99999987
No 473
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=90.92 E-value=0.27 Score=47.39 Aligned_cols=34 Identities=35% Similarity=0.422 Sum_probs=31.5
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~ 81 (333)
..++|+|||+|.-|.+.|..|++. | ++|+++.++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~-G-----~~V~VlE~~ 76 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRA-G-----HDVTILEAN 76 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHT-S-----CEEEEECSC
T ss_pred CCceEEEECCCHHHHHHHHHHHHC-C-----CcEEEEecc
Confidence 457999999999999999999999 8 999999887
No 474
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=90.89 E-value=0.52 Score=41.90 Aligned_cols=36 Identities=22% Similarity=0.141 Sum_probs=30.0
Q ss_pred eEEEECC-CHHHHHHHHHHHHh-cCCCCCCeeEEEEecCCcch
Q 019978 45 RIVGVGA-GAWGSVFTAMLQDS-YGYLRDKVLIRIWRRPGRSV 85 (333)
Q Consensus 45 kI~IIGa-G~mG~alA~~La~~-~G~~~~~~~V~l~~r~~~~~ 85 (333)
||.|.|+ |.+|+.++..|.+. .| ++|++.+|+++..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g-----~~V~~~~r~~~~~ 38 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPA-----SQIVAIVRNPAKA 38 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCG-----GGEEEEESCTTTC
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCC-----ceEEEEEcChHhh
Confidence 5889997 99999999999874 13 8999999987654
No 475
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=90.86 E-value=0.24 Score=45.33 Aligned_cols=37 Identities=19% Similarity=0.215 Sum_probs=33.2
Q ss_pred ceEEEEC-CCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 44 LRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 44 ~kI~IIG-aG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
+++.|+| +|.+|.+++..|++. | .+|++++|++++++
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~-G-----~~V~i~~R~~~~~~ 157 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGE-G-----AEVVLCGRKLDKAQ 157 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHT-T-----CEEEEEESSHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHC-c-----CEEEEEECCHHHHH
Confidence 6899999 899999999999999 8 88999999876554
No 476
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=90.84 E-value=0.25 Score=48.01 Aligned_cols=35 Identities=23% Similarity=0.262 Sum_probs=32.3
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
..++|.|||+|.-|.+.|..|++. | ++|+++++++
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~-g-----~~V~liE~~~ 39 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQL-G-----FKTTCIEKRG 39 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-T-----CCEEEEECSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHC-C-----CeEEEEeCCC
Confidence 457999999999999999999999 8 9999999985
No 477
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=90.83 E-value=0.21 Score=48.26 Aligned_cols=36 Identities=19% Similarity=0.206 Sum_probs=32.3
Q ss_pred CceEEEECCCHHHHHHHHHHHH---hcCCCCCCeeEEEEecCCcc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQD---SYGYLRDKVLIRIWRRPGRS 84 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~---~~G~~~~~~~V~l~~r~~~~ 84 (333)
|++|+|||+|.-|.+.|..|++ . | ++|+++++++..
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~-g-----~~Vtlie~~~~~ 42 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGS-G-----HEVTLISANDYF 42 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGG-G-----SEEEEECSSSEE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCC-c-----CEEEEEeCCCCC
Confidence 5799999999999999999998 6 6 899999998753
No 478
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=90.83 E-value=0.24 Score=46.78 Aligned_cols=35 Identities=29% Similarity=0.423 Sum_probs=30.6
Q ss_pred ceEEEECCCHHHHHHHHHHHHhc-CCCCCCeeEEEEecCCc
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSY-GYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~-G~~~~~~~V~l~~r~~~ 83 (333)
|+|+|||+|..|.++|..|++.. | ++|+++++.+.
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G-----~~V~v~E~~~~ 36 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPL-----WAIDIVEKNDE 36 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTT-----SEEEEECSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCC-----CCEEEEECCCC
Confidence 58999999999999999999861 4 89999998764
No 479
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=90.81 E-value=0.24 Score=47.64 Aligned_cols=35 Identities=17% Similarity=0.179 Sum_probs=31.6
Q ss_pred ceEEEECCCHHHHHHHHHHHH--hcCCCCCCeeEEEEecCCcc
Q 019978 44 LRIVGVGAGAWGSVFTAMLQD--SYGYLRDKVLIRIWRRPGRS 84 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~--~~G~~~~~~~V~l~~r~~~~ 84 (333)
++|+|||+|.-|.+.|..|++ . | ++|+++++++..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~-g-----~~Vtlie~~~~~ 39 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMP-D-----LKITLISDRPYF 39 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT-T-----CEEEEECSSSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCC-C-----CeEEEECCCCCC
Confidence 589999999999999999999 5 6 899999998754
No 480
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=90.76 E-value=0.29 Score=45.15 Aligned_cols=35 Identities=17% Similarity=0.157 Sum_probs=31.6
Q ss_pred CceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 43 ~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
+|+|.|.|+ |.+|..++..|++. | ++|++.+|+++
T Consensus 21 ~~~vlVTGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~ 56 (333)
T 2q1w_A 21 MKKVFITGICGQIGSHIAELLLER-G-----DKVVGIDNFAT 56 (333)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEECCSS
T ss_pred CCEEEEeCCccHHHHHHHHHHHHC-C-----CEEEEEECCCc
Confidence 479999995 99999999999999 8 99999999764
No 481
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=90.72 E-value=0.23 Score=51.19 Aligned_cols=34 Identities=18% Similarity=0.265 Sum_probs=31.2
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
...|+|||+|..|.+.|..|++. | ++|++++++.
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~-G-----~~V~vlEk~~ 297 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRR-G-----AVVTLYCADA 297 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTT-T-----CCEEEEESSS
T ss_pred CCCEEEECCcHHHHHHHHHHHHC-C-----CcEEEEeCCC
Confidence 36899999999999999999999 8 9999999864
No 482
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=90.67 E-value=0.28 Score=44.84 Aligned_cols=37 Identities=16% Similarity=0.142 Sum_probs=32.2
Q ss_pred CCceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcc
Q 019978 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (333)
Q Consensus 42 ~~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (333)
..|||.|.|+ |.+|+.++..|.+. | ++|++.+|+++.
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~~ 50 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEK-G-----YRVHGLVARRSS 50 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEECCCSS
T ss_pred cCCeEEEECCCChHHHHHHHHHHHC-C-----CeEEEEeCCCcc
Confidence 4589999997 99999999999999 8 999999998754
No 483
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=90.65 E-value=0.24 Score=49.08 Aligned_cols=34 Identities=26% Similarity=0.337 Sum_probs=31.7
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
.+|.|||+|..|.++|..|++. | ++|+++++.+.
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~-G-----~~v~viEr~~~ 39 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQ-G-----VRVLVVERRPG 39 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTT-T-----CCEEEECSSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHC-C-----CCEEEEeCCCC
Confidence 6899999999999999999999 8 99999999864
No 484
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=90.64 E-value=0.29 Score=45.41 Aligned_cols=39 Identities=18% Similarity=0.167 Sum_probs=34.0
Q ss_pred CceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhh
Q 019978 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (333)
Q Consensus 43 ~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (333)
.++|.|.|+ |.+|.+++..|++. | ++|++.+|+++.+++
T Consensus 8 ~k~vlVTGas~gIG~~la~~l~~~-G-----~~Vv~~~r~~~~~~~ 47 (319)
T 3ioy_A 8 GRTAFVTGGANGVGIGLVRQLLNQ-G-----CKVAIADIRQDSIDK 47 (319)
T ss_dssp TCEEEEETTTSTHHHHHHHHHHHT-T-----CEEEEEESCHHHHHH
T ss_pred CCEEEEcCCchHHHHHHHHHHHHC-C-----CEEEEEECCHHHHHH
Confidence 358999996 99999999999999 8 899999999876543
No 485
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=90.64 E-value=0.26 Score=45.02 Aligned_cols=36 Identities=19% Similarity=0.206 Sum_probs=32.7
Q ss_pred ceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcch
Q 019978 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (333)
Q Consensus 44 ~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (333)
|+|.|.|+ |.+|+.++..|++. | ++|++.+|+++..
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~~-G-----~~V~~~~r~~~~~ 40 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLEK-G-----YEVYGADRRSGEF 40 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEECSCCSTT
T ss_pred CEEEEECCCChHHHHHHHHHHHC-C-----CEEEEEECCCccc
Confidence 78999997 99999999999999 8 9999999987643
No 486
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=90.64 E-value=0.33 Score=44.54 Aligned_cols=39 Identities=23% Similarity=0.089 Sum_probs=34.0
Q ss_pred CCceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 42 ~~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
..|+|.|.|+ |.+|.+++..|++. | ++|++.+|+.+..+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~-G-----~~V~~~~r~~~~~~ 43 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAH-G-----YDVVIADNLVNSKR 43 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEECCCSSSCT
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHC-C-----CcEEEEecCCcchH
Confidence 3479999996 99999999999999 8 99999999876543
No 487
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=90.55 E-value=0.2 Score=48.46 Aligned_cols=35 Identities=17% Similarity=0.253 Sum_probs=30.8
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
..++|+|||+|.-|.+.|..|++. | ++|+++.++.
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~-g-----~~v~v~E~~~ 49 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSR-G-----TDAVLLESSA 49 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTT-T-----CCEEEECSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC-C-----CCEEEEEcCC
Confidence 346899999999999999999999 8 8999998875
No 488
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=90.55 E-value=0.28 Score=43.60 Aligned_cols=35 Identities=17% Similarity=0.255 Sum_probs=31.2
Q ss_pred CceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 43 ~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
.++|.|.|+ |.+|.+++..|++. | ++|.+.+|+++
T Consensus 19 ~k~vlVTGas~gIG~~~a~~l~~~-G-----~~V~~~~r~~~ 54 (249)
T 1o5i_A 19 DKGVLVLAASRGIGRAVADVLSQE-G-----AEVTICARNEE 54 (249)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHT-T-----CEEEEEESCHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC-C-----CEEEEEcCCHH
Confidence 368899996 89999999999999 8 89999999864
No 489
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=90.54 E-value=0.54 Score=43.95 Aligned_cols=37 Identities=16% Similarity=0.250 Sum_probs=31.6
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
.+|.|+|+|.+|.+.++.+... | .+|+..++++++.+
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~-G-----a~Vi~~~~~~~~~~ 214 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAM-G-----AEVSVFARNEHKKQ 214 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-T-----CEEEEECSSSTTHH
T ss_pred CEEEEECCcHHHHHHHHHHHHC-C-----CeEEEEeCCHHHHH
Confidence 5999999999999988887766 7 88999998887654
No 490
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=90.52 E-value=2.1 Score=38.44 Aligned_cols=62 Identities=13% Similarity=0.132 Sum_probs=36.8
Q ss_pred CCCEEEEecCchhHHHHHHHHHhhhhccCCCCEEEEeeecCcccccCCccCCCHHHHHHhHhCCCCCcEEEEcCCCchHH
Q 019978 160 DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASE 239 (333)
Q Consensus 160 ~aDlIIlaVps~~~~~vl~~i~~~l~~~~~~~~Ivs~~kGi~~~~~~~~~~~~~se~i~~~lg~~~~~~~vl~GP~~a~e 239 (333)
++|++|=.+-+..+.+.++.... . +..+|..|.|+..+. .+.+++.. . .+.++..||+..-
T Consensus 53 ~~DVvIDFT~P~a~~~~~~~~~~---~---g~~~ViGTTG~~~~~---------~~~l~~~a-~---~~~vv~apNfSlG 113 (228)
T 1vm6_A 53 SPDVVIDFSSPEALPKTVDLCKK---Y---RAGLVLGTTALKEEH---------LQMLRELS-K---EVPVVQAYNFSIG 113 (228)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHH---H---TCEEEECCCSCCHHH---------HHHHHHHT-T---TSEEEECSCCCHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHH---c---CCCEEEeCCCCCHHH---------HHHHHHHH-h---hCCEEEeccccHH
Confidence 68999955544555555544433 2 567777787888652 12344432 1 1567888999764
Q ss_pred H
Q 019978 240 I 240 (333)
Q Consensus 240 v 240 (333)
+
T Consensus 114 v 114 (228)
T 1vm6_A 114 I 114 (228)
T ss_dssp H
T ss_pred H
Confidence 3
No 491
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=90.49 E-value=0.21 Score=45.97 Aligned_cols=34 Identities=9% Similarity=0.139 Sum_probs=30.3
Q ss_pred CCceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 019978 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (333)
Q Consensus 42 ~~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~ 81 (333)
..++|+|||+|.-|.+.|..|++. | ++|++++++
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~-g-----~~v~lie~~ 46 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARA-Q-----LAPLVFEGT 46 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHT-T-----CCCEEECCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC-C-----CeEEEEecC
Confidence 346899999999999999999998 8 899999853
No 492
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=90.43 E-value=0.28 Score=44.60 Aligned_cols=32 Identities=31% Similarity=0.377 Sum_probs=29.8
Q ss_pred ceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 019978 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~ 81 (333)
.+|+|||+|.-|.+.|..|++. | ++|+++++.
T Consensus 17 ~dvvIIG~G~aGl~aA~~l~~~-g-----~~v~lie~~ 48 (319)
T 3cty_A 17 FDVVIVGAGAAGFSAAVYAARS-G-----FSVAILDKA 48 (319)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESS
T ss_pred CcEEEECcCHHHHHHHHHHHhC-C-----CcEEEEeCC
Confidence 5899999999999999999998 8 899999984
No 493
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=90.41 E-value=0.29 Score=45.88 Aligned_cols=35 Identities=23% Similarity=0.184 Sum_probs=31.8
Q ss_pred ceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcc
Q 019978 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (333)
Q Consensus 44 ~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (333)
++|.|.|+ |.+|+.++..|++. | ++|++++|+++.
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~-g-----~~V~~~~r~~~~ 64 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGK-G-----YEVHGLIRRSSN 64 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEECCCSS
T ss_pred CeEEEEcCCchHHHHHHHHHHHC-C-----CEEEEEecCCcc
Confidence 58999997 99999999999999 8 999999998754
No 494
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=90.39 E-value=0.34 Score=44.43 Aligned_cols=39 Identities=10% Similarity=0.096 Sum_probs=33.7
Q ss_pred CceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhh
Q 019978 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (333)
Q Consensus 43 ~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (333)
.++|.|.|+ |.+|.++|..|++. | ++|.+.+|+++.+++
T Consensus 31 gk~vlVTGas~gIG~~la~~l~~~-G-----~~V~~~~r~~~~~~~ 70 (301)
T 3tjr_A 31 GRAAVVTGGASGIGLATATEFARR-G-----ARLVLSDVDQPALEQ 70 (301)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC-C-----CEEEEEECCHHHHHH
Confidence 367999997 88999999999999 8 899999999876543
No 495
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=90.38 E-value=0.29 Score=44.83 Aligned_cols=34 Identities=15% Similarity=0.301 Sum_probs=30.1
Q ss_pred CceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 019978 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (333)
Q Consensus 43 ~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (333)
||+|.|.|+ |.+|+.++..|++. | ++|++.+|+.
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~ 35 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQ-G-----IDLIVFDNLS 35 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEECCC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhC-C-----CEEEEEeCCC
Confidence 479999995 99999999999999 8 9999999853
No 496
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=90.37 E-value=0.25 Score=48.35 Aligned_cols=34 Identities=24% Similarity=0.326 Sum_probs=30.9
Q ss_pred ceEEEECCCHHHHHHHHHHHH---hcCCCCCCee---EEEEecCCc
Q 019978 44 LRIVGVGAGAWGSVFTAMLQD---SYGYLRDKVL---IRIWRRPGR 83 (333)
Q Consensus 44 ~kI~IIGaG~mG~alA~~La~---~~G~~~~~~~---V~l~~r~~~ 83 (333)
++|+|||+|.-|.+.|..|++ . | ++ |+++++.+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~-G-----~~~~~V~v~E~~~~ 42 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEK-G-----AEIPELVCFEKQAD 42 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHT-T-----CCCCEEEEECSSSS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhc-C-----CCCCcEEEEEcCCC
Confidence 589999999999999999999 8 7 88 999998753
No 497
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=90.30 E-value=0.31 Score=48.96 Aligned_cols=35 Identities=23% Similarity=0.281 Sum_probs=31.6
Q ss_pred CceEEEECCCHHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 019978 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (333)
Q Consensus 43 ~~kI~IIGaG~mG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (333)
...|.|||+|..|.+.|..+++. | ++|+++.+.+.
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~-G-----~~V~vlEk~~~ 160 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDS-G-----AKVILIEKEPV 160 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-C-----CcEEEEeCCCC
Confidence 46899999999999999999999 8 89999988763
No 498
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=90.28 E-value=0.25 Score=45.10 Aligned_cols=37 Identities=22% Similarity=0.191 Sum_probs=32.9
Q ss_pred CceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcch
Q 019978 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (333)
Q Consensus 43 ~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (333)
.|+|.|.|+ |.+|+.++..|++. | ++|++.+|+.+..
T Consensus 11 ~~~vlVTGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~~~ 48 (342)
T 1y1p_A 11 GSLVLVTGANGFVASHVVEQLLEH-G-----YKVRGTARSASKL 48 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESSHHHH
T ss_pred CCEEEEECCccHHHHHHHHHHHHC-C-----CEEEEEeCCcccH
Confidence 379999997 99999999999999 8 9999999987543
No 499
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=90.27 E-value=0.26 Score=45.37 Aligned_cols=52 Identities=21% Similarity=0.166 Sum_probs=32.7
Q ss_pred cccchHHhhhHHHHhhccCCCCCceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchh
Q 019978 21 TNGSLEERLDELRRLMGKAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (333)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (333)
|+|-...+|+. ||.| +.+.|-|+ +-+|.++|..|++. | .+|.+.+|+++.++
T Consensus 15 ~~n~~~~~Ms~--rL~g------KvalVTGas~GIG~aiA~~la~~-G-----a~V~i~~r~~~~l~ 67 (273)
T 4fgs_A 15 TENLYFQSMTQ--RLNA------KIAVITGATSGIGLAAAKRFVAE-G-----ARVFITGRRKDVLD 67 (273)
T ss_dssp ----------C--TTTT------CEEEEESCSSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHH
T ss_pred ccccchhhhcc--hhCC------CEEEEeCcCCHHHHHHHHHHHHC-C-----CEEEEEECCHHHHH
Confidence 45555555542 4555 34455575 77999999999999 8 89999999987654
No 500
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=90.27 E-value=0.39 Score=44.07 Aligned_cols=38 Identities=13% Similarity=0.256 Sum_probs=32.9
Q ss_pred ceEEEECC-CHHHHHHHHHHHHhcCCCCCCeeEEEEecCCcchhh
Q 019978 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (333)
Q Consensus 44 ~kI~IIGa-G~mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (333)
++|.|.|+ |.+|.++|..|++. | ++|.+.+|+++.+++
T Consensus 42 k~vlVTGas~GIG~aia~~la~~-G-----~~V~~~~r~~~~~~~ 80 (293)
T 3rih_A 42 RSVLVTGGTKGIGRGIATVFARA-G-----ANVAVAARSPRELSS 80 (293)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHT-T-----CEEEEEESSGGGGHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC-C-----CEEEEEECCHHHHHH
Confidence 57888886 89999999999999 8 899999999876543
Done!