BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019980
(333 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LT17|BBR_ARATH E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana
GN=BBR PE=2 SV=1
Length = 340
Score = 298 bits (764), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 174/279 (62%), Positives = 211/279 (75%), Gaps = 23/279 (8%)
Query: 52 QDSRTRTPFTNLSQVDADLALARTLQEQERAYMMLRMNNNEGSDYGSWEAGSYLHDEDDD 111
+ S R PFTNLSQ+DADLALARTLQEQERAYMML MN+ E SDYGSWE GSY++DED+
Sbjct: 80 RSSSARVPFTNLSQIDADLALARTLQEQERAYMMLTMNS-EISDYGSWETGSYVYDEDEF 138
Query: 112 FGGDGDDDDDDDDEDESDAGDHENHECDGSDFVIDDDDEDEDAFDVHAHEEVEEDNNPSV 171
+ +D+DDD+DE E+D E DG D +VHA+E+ +ED+ S
Sbjct: 139 DDPENEDEDDDEDEYETDDDPQE----DGLDV------------NVHANEDDQEDDGNS- 181
Query: 172 EYDSDVFSSDEAYARALQDAEERDMAARLLALAEIHDREIEDPEDHGGHSQDTWEEVDPD 231
+ + ++ DEAYARALQ+AEERDMAARL AL+ + +R +ED ED SQD W+E+DPD
Sbjct: 182 DIEEVAYTDDEAYARALQEAEERDMAARLSALSGLANRVVEDLEDESHTSQDAWDEMDPD 241
Query: 232 ELSYEELLALGEVVGSESRGLSADTLATLPTVNYKGGTSQNGSNDSCLGFSCVICRLDYE 291
ELSYEELLALG++VG+ESRGLSADT+A+LP+ YK G +QNG+N+ SCVICRLDYE
Sbjct: 242 ELSYEELLALGDIVGTESRGLSADTIASLPSKRYKEGDNQNGTNE-----SCVICRLDYE 296
Query: 292 DGETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVSTS 330
D E L +L CKHSYHSECINNWLKINKVCPVCSAEVSTS
Sbjct: 297 DDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEVSTS 335
>sp|Q8L649|BB_ARATH E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana GN=BB PE=1
SV=1
Length = 248
Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 75/107 (70%), Gaps = 4/107 (3%)
Query: 222 QDTWEE-VDPDELSYEELLALGEVVGSESRGLSADTLATLPTVNYKGGTSQNGSNDSCLG 280
Q +W++ +DPD ++YEEL+ LGE VG+ESRGLS + + TLPT YK G+ + G
Sbjct: 138 QVSWQDDIDPDTMTYEELVELGEAVGTESRGLSQELIETLPTKKYKFGSIFSRKR---AG 194
Query: 281 FSCVICRLDYEDGETLTVLSCKHSYHSECINNWLKINKVCPVCSAEV 327
CVIC+L Y+ GE L CKH YHSECI+ WL INKVCPVC++EV
Sbjct: 195 ERCVICQLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVCNSEV 241
>sp|Q8BI21|RNF38_MOUSE RING finger protein 38 OS=Mus musculus GN=Rnf38 PE=2 SV=1
Length = 518
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
Query: 235 YEELLALGEVVG-SESRGLSADTLATLPTVNYKGGTSQNGSNDSCLGFSCVICRLDYEDG 293
YE LL L E +G ++ RGL+ + LP+ + N SN CV+C D+E
Sbjct: 423 YEALLNLAERLGEAKPRGLTKADIEQLPSYRF------NPSNHQSEQTLCVVCMCDFESR 476
Query: 294 ETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVS 328
+ L VL C H +H++C++ WLK N+ CP+C A+ S
Sbjct: 477 QLLRVLPCNHEFHAKCVDKWLKGNRTCPICRADAS 511
>sp|Q9H0F5|RNF38_HUMAN RING finger protein 38 OS=Homo sapiens GN=RNF38 PE=1 SV=4
Length = 515
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 7/95 (7%)
Query: 235 YEELLALGEVVG-SESRGLSADTLATLPTVNYKGGTSQNGSNDSCLGFSCVICRLDYEDG 293
YE LL L E +G ++ RGL+ + LP+ + Q+ CV+C D+E
Sbjct: 420 YEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQT------LCVVCMCDFESR 473
Query: 294 ETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVS 328
+ L VL C H +H++C++ WLK N+ CP+C A+ S
Sbjct: 474 QLLRVLPCNHEFHAKCVDKWLKANRTCPICRADAS 508
>sp|Q08CG8|RNF44_DANRE RING finger protein 44 OS=Danio rerio GN=rnf44 PE=2 SV=1
Length = 448
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 7/95 (7%)
Query: 235 YEELLALGEVVG-SESRGLSADTLATLPTVNYKGGTSQNGSNDSCLGFSCVICRLDYEDG 293
YE LL L E +G ++ RGL+ + LP+ + +N ++ L CV+C D+E
Sbjct: 353 YEALLNLAERLGEAKPRGLTKADIEQLPSYRFN---LENHQSEQTL---CVVCFSDFESR 406
Query: 294 ETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVS 328
+ L VL C H +H++C++ WLK N+ CP+C A+ S
Sbjct: 407 QLLRVLPCNHEFHAKCVDKWLKTNRTCPICRADAS 441
>sp|Q7L0R7|RNF44_HUMAN RING finger protein 44 OS=Homo sapiens GN=RNF44 PE=2 SV=1
Length = 432
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
Query: 235 YEELLALGEVVG-SESRGLSADTLATLPTVNYKGGTSQNGSNDSCLGFSCVICRLDYEDG 293
YE LL L E +G ++ RGL+ + LP+ + + Q+ CV+C D+E
Sbjct: 337 YEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQSEQT------LCVVCFSDFEAR 390
Query: 294 ETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVS 328
+ L VL C H +H++C++ WLK N+ CP+C A+ S
Sbjct: 391 QLLRVLPCNHEFHTKCVDKWLKANRTCPICRADAS 425
>sp|Q4V7B8|RNF44_RAT RING finger protein 44 OS=Rattus norvegicus GN=Rnf44 PE=2 SV=1
Length = 350
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
Query: 235 YEELLALGEVVG-SESRGLSADTLATLPTVNYKGGTSQNGSNDSCLGFSCVICRLDYEDG 293
YE LL L E +G ++ RGL+ + LP+ + + Q+ CV+C D+E
Sbjct: 255 YEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQSEQT------LCVVCFSDFEVR 308
Query: 294 ETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVS 328
+ L VL C H +H++C++ WLK N+ CP+C A+ S
Sbjct: 309 QLLRVLPCNHEFHAKCVDKWLKANRTCPICRADAS 343
>sp|Q3UHJ8|RNF44_MOUSE RING finger protein 44 OS=Mus musculus GN=Rnf44 PE=2 SV=1
Length = 407
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
Query: 235 YEELLALGEVVG-SESRGLSADTLATLPTVNYKGGTSQNGSNDSCLGFSCVICRLDYEDG 293
YE LL L E +G ++ RGL+ + LP+ + + Q+ CV+C D+E
Sbjct: 312 YEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQSEQT------LCVVCFSDFEVR 365
Query: 294 ETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVS 328
+ L VL C H +H++C++ WLK N+ CP+C A+ S
Sbjct: 366 QLLRVLPCNHEFHAKCVDKWLKANRTCPICRADAS 400
>sp|Q6ZSG1|RN165_HUMAN RING finger protein 165 OS=Homo sapiens GN=RNF165 PE=1 SV=1
Length = 346
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 9/104 (8%)
Query: 234 SYEELLALGEVVGSESRGLSADTL--ATLPTVNYKGGTSQNGSNDSCLGF------SCVI 285
SYEELL L + +G+ +RG +T+ T P YK Q+G G C I
Sbjct: 238 SYEELLQLEDRLGNVTRGAVQNTIERFTFPH-KYKKRRPQDGKGKKDEGEESDTDEKCTI 296
Query: 286 CRLDYEDGETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVST 329
C EDGE + L C H +H C++ WL ++K CP+C ++ T
Sbjct: 297 CLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDIET 340
>sp|Q7T037|RF12B_XENLA E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b
PE=2 SV=1
Length = 757
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 233 LSYEELLALGEVVGSESRGLSADTLATLPTVNYKGGTSQNGSNDSCLGFSCVICRLDYED 292
LS + L E + RGL+ + + L T NY G ND+ +C +C +Y +
Sbjct: 662 LSLAQFFLLNEDDDDQPRGLTKEQIDNLSTRNY-------GENDALK--TCSVCITEYTE 712
Query: 293 GETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVSTSGH 332
G L L C H YH CI+ WL N CP+C V +G+
Sbjct: 713 GNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVLVAGN 752
>sp|Q07G42|RNF12_XENTR E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis GN=rnf12
PE=2 SV=1
Length = 639
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 233 LSYEELLALGEVVGSESRGLSADTLATLPTVNYKGGTSQNGSNDSCLGFSCVICRLDYED 292
LS + L E + RGL+ + + L T N+ G ND+ +C +C +Y +
Sbjct: 544 LSLAQFFLLNEDDDDQPRGLTKEQIDNLSTRNF-------GENDALK--TCSVCITEYTE 594
Query: 293 GETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVSTSGH 332
G L L C H YH CI+ WL N CP+C V +G+
Sbjct: 595 GNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVAGN 634
>sp|E9QAU8|RN165_MOUSE RING finger protein 165 OS=Mus musculus GN=Rnf165 PE=2 SV=1
Length = 347
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 234 SYEELLALGEVVGSESRGLSADTL--ATLPTVNYKGGTSQNGSNDSCLGF------SCVI 285
SYEELL L + +G+ +RG +T+ T P YK Q+ G C I
Sbjct: 239 SYEELLQLEDRLGNVTRGAVQNTIERFTFPH-KYKKRRPQDSKGKKDEGEESDTDEKCTI 297
Query: 286 CRLDYEDGETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVST 329
C EDGE + L C H +H C++ WL ++K CP+C ++ T
Sbjct: 298 CLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDIET 341
>sp|Q641J8|RF12A_XENLA E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis GN=rnf12-a
PE=1 SV=1
Length = 622
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 233 LSYEELLALGEVVGSESRGLSADTLATLPTVNYKGGTSQNGSNDSCLGFSCVICRLDYED 292
LS + L E + RGL+ + + L T N+ G ND+ +C +C +Y +
Sbjct: 527 LSLAQFFLLNEDDDDQPRGLTKEQIDNLSTRNF-------GENDALK--TCSVCITEYTE 577
Query: 293 GETLTVLSCKHSYHSECINNWLKINKVCPVCSAEV 327
G L L C H YH CI+ WL N CP+C V
Sbjct: 578 GNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAV 612
>sp|Q9WTV7|RNF12_MOUSE E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2
Length = 600
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 233 LSYEELLALGEVVGSESRGLSADTLATLPTVNYKGGTSQNGSNDSCLGFSCVICRLDYED 292
LS + L E + RGL+ + + L ++ G ND+ +C +C +Y +
Sbjct: 505 LSLAQFFLLNEDDEDQPRGLTKEQIDNLAMRSF-------GENDALK--TCSVCITEYTE 555
Query: 293 GETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVSTSGH 332
G L L C H YH CI+ WL N CP+C V +SG+
Sbjct: 556 GNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLSSGN 595
>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
Length = 624
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Query: 233 LSYEELLALGEVVGSESRGLSADTLATLPTVNYKGGTSQNGSNDSCLGFSCVICRLDYED 292
LS + L E + RGL+ + + L ++ G ND+ +C +C +Y +
Sbjct: 529 LSLAQFFLLNEDDDDQPRGLTKEQIDNLAMRSF-------GENDALK--TCSVCITEYTE 579
Query: 293 GETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVSTSGH 332
G L L C H YH CI+ WL N CP+C V SG+
Sbjct: 580 GNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGN 619
>sp|Q9Y252|RNF6_HUMAN E3 ubiquitin-protein ligase RNF6 OS=Homo sapiens GN=RNF6 PE=1 SV=1
Length = 685
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 250 RGLSADTLATLPTVNYKGGTSQNGSNDSCLGFSCVICRLDYEDGETLTVLSCKHSYHSEC 309
RGL+ + + L T +Y ++ S DS LG C +C DY G L L C H +H C
Sbjct: 604 RGLTKEQIDNLSTRHY-----EHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHC 658
Query: 310 INNWLKINKVCPVCSAEV 327
I+ WL N CP+C V
Sbjct: 659 IDRWLSENCTCPICRQPV 676
>sp|O54965|RNF13_MOUSE E3 ubiquitin-protein ligase RNF13 OS=Mus musculus GN=Rnf13 PE=1
SV=2
Length = 381
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 10/77 (12%)
Query: 255 DTLATLPTVNYKGGTSQNGSNDSCLGFSCVICRLDYEDGETLTVLSCKHSYHSECINNWL 314
D L LP +K G + C IC +YEDG+ L +L C H+YH +C++ WL
Sbjct: 221 DQLKKLPVHKFKKGDEYD---------VCAICLEEYEDGDKLRILPCSHAYHCKCVDPWL 271
Query: 315 -KINKVCPVCSAEVSTS 330
K K CPVC +V S
Sbjct: 272 TKTKKTCPVCKQKVVPS 288
>sp|Q66HG0|RNF13_RAT E3 ubiquitin-protein ligase RNF13 OS=Rattus norvegicus GN=Rnf13
PE=2 SV=1
Length = 380
Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 10/77 (12%)
Query: 255 DTLATLPTVNYKGGTSQNGSNDSCLGFSCVICRLDYEDGETLTVLSCKHSYHSECINNWL 314
D L LP +K G + C IC +YEDG+ L +L C H+YH +C++ WL
Sbjct: 221 DQLKKLPVHKFKKGDEYD---------VCAICLEEYEDGDKLRILPCSHAYHCKCVDPWL 271
Query: 315 -KINKVCPVCSAEVSTS 330
K K CPVC +V S
Sbjct: 272 TKTKKTCPVCKQKVVPS 288
>sp|Q5RCV8|RNF13_PONAB E3 ubiquitin-protein ligase RNF13 OS=Pongo abelii GN=RNF13 PE=2
SV=1
Length = 381
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 10/77 (12%)
Query: 255 DTLATLPTVNYKGGTSQNGSNDSCLGFSCVICRLDYEDGETLTVLSCKHSYHSECINNWL 314
D L LP +K G + C IC +YEDG+ L +L C H+YH +C++ WL
Sbjct: 221 DQLKKLPVHKFKKGDEYD---------VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWL 271
Query: 315 -KINKVCPVCSAEVSTS 330
K K CPVC +V S
Sbjct: 272 TKTKKTCPVCKQKVVPS 288
>sp|O43567|RNF13_HUMAN E3 ubiquitin-protein ligase RNF13 OS=Homo sapiens GN=RNF13 PE=1
SV=1
Length = 381
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 10/77 (12%)
Query: 255 DTLATLPTVNYKGGTSQNGSNDSCLGFSCVICRLDYEDGETLTVLSCKHSYHSECINNWL 314
D L LP +K G + C IC +YEDG+ L +L C H+YH +C++ WL
Sbjct: 221 DQLKKLPVHKFKKGDEYD---------VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWL 271
Query: 315 -KINKVCPVCSAEVSTS 330
K K CPVC +V S
Sbjct: 272 TKTKKTCPVCKQKVVPS 288
>sp|Q0VD51|RNF13_BOVIN E3 ubiquitin-protein ligase RNF13 OS=Bos taurus GN=RNF13 PE=2 SV=1
Length = 380
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 10/77 (12%)
Query: 255 DTLATLPTVNYKGGTSQNGSNDSCLGFSCVICRLDYEDGETLTVLSCKHSYHSECINNWL 314
D L LP +K G + C IC +YEDG+ L +L C H+YH +C++ WL
Sbjct: 221 DQLKKLPVHKFKKGDEYD---------VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWL 271
Query: 315 -KINKVCPVCSAEVSTS 330
K K CPVC +V S
Sbjct: 272 TKTKKTCPVCKQKVVPS 288
>sp|Q90972|RNF13_CHICK E3 ubiquitin-protein ligase RNF13 OS=Gallus gallus GN=RNF13 PE=1
SV=1
Length = 381
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 10/77 (12%)
Query: 255 DTLATLPTVNYKGGTSQNGSNDSCLGFSCVICRLDYEDGETLTVLSCKHSYHSECINNWL 314
D L LP +K G + C IC +YEDG+ L +L C H+YH +C++ WL
Sbjct: 221 DQLKKLPVHKFKKGDEYD---------VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWL 271
Query: 315 -KINKVCPVCSAEVSTS 330
K K CPVC +V S
Sbjct: 272 TKTKKTCPVCKQKVVPS 288
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 12/92 (13%)
Query: 242 GEVVGSE--SRGLSADTLATLPTVNY---KGGTSQNGSNDSCLGFSCVICRLDYEDGETL 296
GEV + SRGL D + + P+ Y KG G G C IC ++ED ETL
Sbjct: 88 GEVAFTRRTSRGLGKDVINSFPSFLYSQVKGLKIGKG------GVECAICLNEFEDEETL 141
Query: 297 TVLS-CKHSYHSECINNWLKINKVCPVCSAEV 327
++ C H++H+ CI+ WL CPVC A +
Sbjct: 142 RLMPPCSHAFHASCIDVWLSSRSTCPVCRASL 173
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 249 SRGLSADTLATLPTVNYKGGTSQNGSNDSCLGFSCVICRLDYEDGETLTVLS-CKHSYHS 307
+RGL A+T+ T PT Y +Q + C IC ++ED ETL +L C H +H
Sbjct: 93 ARGLDAETIETFPTFVYSEVKTQKIGKGA---LECAICLNEFEDDETLRLLPKCDHVFHP 149
Query: 308 ECINNWLKINKVCPVCSAEVS 328
CI WL+ + CPVC ++
Sbjct: 150 HCIGAWLQGHVTCPVCRTNLA 170
>sp|Q9DBU5|RNF6_MOUSE E3 ubiquitin-protein ligase RNF6 OS=Mus musculus GN=Rnf6 PE=1 SV=1
Length = 667
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 250 RGLSADTLATLPTVNYKGGTSQNGSNDSCLGFSCVICRLDYEDGETLTVLSCKHSYHSEC 309
RGL+ + + L T +Y+ Q+G DS LG C +C DY G L L C H +H C
Sbjct: 586 RGLTKEQIDNLSTRSYE----QDGV-DSELGKVCSVCISDYVAGNKLRQLPCLHEFHIHC 640
Query: 310 INNWLKINKVCPVCSAEV 327
I+ WL N CPVC V
Sbjct: 641 IDRWLSENCTCPVCRRPV 658
>sp|Q9H6Y7|RN167_HUMAN E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens GN=RNF167 PE=1
SV=1
Length = 350
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 10/77 (12%)
Query: 252 LSADTLATLPTVNYKGGTSQNGSNDSCLGFSCVICRLDYEDGETLTVLSCKHSYHSECIN 311
L+ + L +PT +Y+ G + C IC +YEDG+ L VL C H+YHS C++
Sbjct: 208 LTKEQLKQIPTHDYQKGDQYD---------VCAICLDEYEDGDKLRVLPCAHAYHSRCVD 258
Query: 312 NWL-KINKVCPVCSAEV 327
WL + K CP+C V
Sbjct: 259 PWLTQTRKTCPICKQPV 275
>sp|Q6NKR1|ATL28_ARATH RING-H2 finger protein ATL28 OS=Arabidopsis thaliana GN=ATL28 PE=2
SV=1
Length = 254
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 248 ESRGLSADTLATLPTVNYKGGTSQNGSNDSCLGFSCVICRLDYEDGETLTVLS-CKHSYH 306
E+ GL + + P +Y T +N + C IC ++ D +T+ +++ C+H +H
Sbjct: 74 ENTGLDPFIIRSFPVFHYSSATKKNHGTE------CAICLSEFSDEDTVRLITVCRHPFH 127
Query: 307 SECINNWLKINKVCPVCSAEV 327
S CI+ W +++K CPVC E+
Sbjct: 128 SNCIDLWFELHKTCPVCRCEL 148
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 245 VGSESRGLSADTLATLPTVNYKGGTSQNGSNDSCLG---FSCVICRLDYEDGETLTVLS- 300
V + +RGL + T PT Y +Q LG C IC ++ED ETL +L
Sbjct: 93 VNAAARGLDVSVVETFPTFLYSDVKTQK------LGKGELECAICLNEFEDDETLRLLPK 146
Query: 301 CKHSYHSECINNWLKINKVCPVCSAEVS 328
C H +H CI+ WL+ + CPVC A ++
Sbjct: 147 CDHVFHPHCIDAWLEAHVTCPVCRANLA 174
>sp|Q91XF4|RN167_MOUSE E3 ubiquitin-protein ligase RNF167 OS=Mus musculus GN=Rnf167 PE=2
SV=1
Length = 347
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 283 CVICRLDYEDGETLTVLSCKHSYHSECINNWL-KINKVCPVCSAEV 327
C IC +YEDG+ L VL C H+YHS C++ WL + K CP+C V
Sbjct: 230 CAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPV 275
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 247 SESRGLSADTLATLPTVNYKGGTSQNGSNDSCLGFSCVICRLDYEDGETLTVLS-CKHSY 305
S RGL + + +LP Y Q + CVIC D+E+GET+ V+ C H +
Sbjct: 111 SFRRGLDSQAVRSLPVYRYTKAAKQRNED-------CVICLSDFEEGETVKVIPHCGHVF 163
Query: 306 HSECINNWLKINKVCPVC 323
H +C++ WL CP+C
Sbjct: 164 HVDCVDTWLSSYVTCPLC 181
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 12/99 (12%)
Query: 236 EELLALGE-VVGSESR-GLSADTLATLPTVNY---KGGTSQNGSNDSCLGFSCVICRLDY 290
EE+ A G+ V+ S +R GL + + + PT Y KG G G C IC ++
Sbjct: 77 EEIGAAGQDVLHSRARRGLEKEVIESFPTFLYSEVKGLKIGKG------GVECAICLSEF 130
Query: 291 EDGETLTVLS-CKHSYHSECINNWLKINKVCPVCSAEVS 328
ED ETL + C H++H+ CI+ WL CPVC A +S
Sbjct: 131 EDQETLRWMPPCSHTFHANCIDVWLSSWSTCPVCRANLS 169
>sp|Q9LS99|ATL77_ARATH RING-H2 finger protein ATL77 OS=Arabidopsis thaliana GN=ATL77 PE=2
SV=1
Length = 220
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 247 SESRGLSADTLATLPTVNYKGGTSQNGSNDSCLGFSCVICRLDYEDGETLTVLS-CKHSY 305
S ++G+ L LP VNY + G +G CVIC D+ GE L VL C H +
Sbjct: 99 SVNKGIKKKALKMLPVVNYSPEINLPG-----VGEECVICLSDFVAGEQLRVLPKCNHGF 153
Query: 306 HSECINNWLKINKVCPVC 323
H CI+ WL + CP C
Sbjct: 154 HLRCIDKWLTQHMTCPKC 171
>sp|Q5XIL0|RN167_RAT E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus GN=Rnf167
PE=2 SV=1
Length = 349
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 283 CVICRLDYEDGETLTVLSCKHSYHSECINNWL-KINKVCPVCSAEV 327
C IC +YEDG+ L +L C H+YHS C++ WL + K CP+C V
Sbjct: 230 CAICLDEYEDGDKLRILPCAHAYHSRCVDPWLTQTRKTCPICKQPV 275
>sp|Q6GPV5|RN181_XENLA E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2
SV=1
Length = 156
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 280 GFSCVICRLDYEDGETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVST 329
C +C L++E+GET+ L C+H +HS CI WL CP+C E+ T
Sbjct: 76 ALKCPVCLLEFEEGETVRQLPCEHLFHSACILPWLGKTNSCPLCRHELPT 125
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 248 ESRGLSADTLATLPTVNYKGGTSQNGSNDSCLGFSCVICRLDYEDGETLTVLS-CKHSYH 306
++RGL A + T PT Y + ++ C +C ++ED ETL ++ C H +H
Sbjct: 112 QARGLDASIIETFPTFQYSTVKTLRIGKEA---LECSVCLNEFEDDETLRLIPKCCHVFH 168
Query: 307 SECINNWLKINKVCPVCSAEV 327
CI+ WL+ + CP+C A++
Sbjct: 169 PGCIDAWLRSHTTCPLCRADL 189
>sp|O64763|ATL9_ARATH E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9
PE=1 SV=1
Length = 378
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 249 SRGLSADTLATLPTVNYKGGTSQNGSNDSCLGFSCVICRLDYEDGETLTVLS-CKHSYHS 307
+RGL A+ + T PT Y + G C +C ++ED ETL ++ C H +H+
Sbjct: 104 ARGLDAEAIETFPTFLYSEVKAVRIGKG---GVECAVCLCEFEDDETLRLMPPCCHVFHA 160
Query: 308 ECINNWLKINKVCPVCSAEV 327
+C++ WL + CP+C A++
Sbjct: 161 DCVDVWLSEHSTCPLCRADL 180
>sp|Q5M974|RN181_XENTR E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181
PE=2 SV=1
Length = 156
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 280 GFSCVICRLDYEDGETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVST 329
C +C L++E+GET+ L C+H +HS CI WL CP+C E+ T
Sbjct: 76 ALKCPVCLLEFEEGETVRQLPCEHLFHSSCILPWLGKTNSCPLCRHELPT 125
>sp|Q66J97|R111C_XENLA E3 ubiquitin-protein ligase arkadia-C OS=Xenopus laevis GN=rnf111-c
PE=2 SV=1
Length = 967
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 14/114 (12%)
Query: 230 PDELSYEELLALGEVVGSESRGLSADTL--ATLPTVNYKGGT----------SQNGSNDS 277
P ++EEL+ L E +G+ +RG S T+ T P K T Q+G
Sbjct: 848 PFRGNFEELIHLEERLGNVNRGASQGTIERCTYPHKYKKVSTDWFSQRKLHSKQDGEEAP 907
Query: 278 CLGFS--CVICRLDYEDGETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVST 329
C IC E+GE + L C H +H C++ WL NK CP+C ++ T
Sbjct: 908 EEDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIDT 961
>sp|Q6NRV8|R111B_XENLA E3 ubiquitin-protein ligase arkadia-B OS=Xenopus laevis GN=rnf111-b
PE=2 SV=1
Length = 959
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 230 PDELSYEELLALGEVVGSESRGLSADTL--ATLPTVNYKGGT----------SQNGSNDS 277
P ++EEL+ L E +G+ +RG S T+ T P K T Q+G +
Sbjct: 840 PFRGNFEELIHLEERLGNVNRGASQGTIERCTYPHKYKKVSTDWFSQRKLHSKQDGEEAT 899
Query: 278 CLGFS--CVICRLDYEDGETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVST 329
C IC E+GE + L C H +H C++ WL NK CP+C ++ T
Sbjct: 900 EEDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIDT 953
>sp|Q94BY6|ATL75_ARATH RING-H2 finger protein ATL75 OS=Arabidopsis thaliana GN=ATL75 PE=2
SV=1
Length = 226
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 236 EELLALGEVVGSESRGLSADTLATLPTVNYKGGTSQNGSNDSCLGFSCVICRLDYEDGET 295
E + L GS ++G++ L P V+Y + G LG CVIC D+ GE
Sbjct: 94 EPIAGLSTPCGSSNKGINKKALRMFPVVSYSPEMNLPG-----LGEECVICLSDFVSGEQ 148
Query: 296 LTVLS-CKHSYHSECINNWLKINKVCPVC 323
+ +L C H +H CI+ WL+ + CP C
Sbjct: 149 IRMLPKCHHGFHVRCIDKWLQQHLTCPKC 177
>sp|Q9M0R4|ATL37_ARATH Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana
GN=ATL37 PE=3 SV=1
Length = 357
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 10/83 (12%)
Query: 250 RGLSADTLATLPTVNY---KGGTSQNGSNDSCLGFSCVICRLDYEDGETLTVLS-CKHSY 305
RG+ D + + P Y K NG G C IC ++ED E L + C H++
Sbjct: 90 RGIDKDVIESFPAFLYSEVKAFKIGNG------GVECAICLCEFEDEEPLRWMPPCSHTF 143
Query: 306 HSECINNWLKINKVCPVCSAEVS 328
H+ CI+ WL CPVC A +S
Sbjct: 144 HANCIDEWLSSRSTCPVCRANLS 166
>sp|Q90ZT7|R111A_XENLA E3 ubiquitin-protein ligase arkadia-A (Fragment) OS=Xenopus laevis
GN=rnf111-a PE=2 SV=1
Length = 923
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 14/109 (12%)
Query: 235 YEELLALGEVVGSESRGLSADTL--ATLPTVNYKGGT----------SQNGSNDSCLGFS 282
+EEL+ L E +G+ +RG S T+ T P K T Q+G
Sbjct: 809 FEELIHLEERLGNVNRGASQGTIERCTYPHKYKKVSTDWFSQRKLHSKQDGEEAPEEDTE 868
Query: 283 --CVICRLDYEDGETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVST 329
C IC E+GE + L C H +H C++ WL NK CP+C ++ T
Sbjct: 869 EKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIDT 917
>sp|Q0V9R0|RN111_XENTR E3 ubiquitin-protein ligase arkadia OS=Xenopus tropicalis GN=rnf111
PE=2 SV=1
Length = 954
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 230 PDELSYEELLALGEVVGSESRGLSADTL--ATLPTVNYKGGT----------SQNGSNDS 277
P ++EEL+ L E +G+ +RG S T+ T P K T Q+G +
Sbjct: 835 PFRGNFEELIHLEERLGNVNRGASQGTIERCTYPHKYEKVSTDWFSQRKLHSKQDGEEAT 894
Query: 278 CLGF--SCVICRLDYEDGETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVST 329
C IC E+GE + L C H +H C++ WL NK CP+C ++ T
Sbjct: 895 EEDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIDT 948
>sp|Q99ML9|RN111_MOUSE E3 ubiquitin-protein ligase Arkadia OS=Mus musculus GN=Rnf111 PE=1
SV=1
Length = 989
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 16/108 (14%)
Query: 235 YEELLALGEVVGSESRGLSADTL--ATLPTVNYKGGTS-------------QNGSNDSCL 279
+EEL+ L E +G+ +RG S T+ T P YK T+ +
Sbjct: 875 FEELIHLEERLGNVNRGASQGTIERCTYPH-KYKKVTTDWFSQRKLHCKQDGEEGTEEDT 933
Query: 280 GFSCVICRLDYEDGETLTVLSCKHSYHSECINNWLKINKVCPVCSAEV 327
C IC E+GE + L C H +H C++ WL NK CP+C ++
Sbjct: 934 EEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 981
>sp|Q5R476|RN111_PONAB E3 ubiquitin-protein ligase Arkadia OS=Pongo abelii GN=RNF111 PE=2
SV=1
Length = 986
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 8/100 (8%)
Query: 235 YEELLALGEVVGSESRGLSADTL--ATLPTVNYKG-----GTSQNGSNDSCLGFSCVICR 287
+EEL+ L E +G+ +RG S T+ T P YK + C IC
Sbjct: 880 FEELIHLEERLGNVNRGASQGTIERCTYPH-KYKKRKLHCKQDGEEGTEEDTEEKCTICL 938
Query: 288 LDYEDGETLTVLSCKHSYHSECINNWLKINKVCPVCSAEV 327
E+GE + L C H +H C++ WL NK CP+C ++
Sbjct: 939 SILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 978
>sp|Q8GUU2|RIE1_ARATH E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana GN=RIE1
PE=2 SV=1
Length = 359
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 42/108 (38%), Gaps = 23/108 (21%)
Query: 241 LGEVVGSESRGLSADTLATLPTVNYK------------GGTSQNGSNDSCLGFS------ 282
L V G+E G+S L LP +K G N CL
Sbjct: 246 LYAVAGTE--GVSEAELGVLPLYKFKAFHSNEKNITGPGKMVPIPINGLCLATERTLLAE 303
Query: 283 ---CVICRLDYEDGETLTVLSCKHSYHSECINNWLKINKVCPVCSAEV 327
C IC YEDG L L C H +HS CI WLK+ CP+C +
Sbjct: 304 DADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNI 351
>sp|Q6ZNA4|RN111_HUMAN E3 ubiquitin-protein ligase Arkadia OS=Homo sapiens GN=RNF111 PE=1
SV=3
Length = 994
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 16/108 (14%)
Query: 235 YEELLALGEVVGSESRGLSADTL--ATLPTVNYKGGTS-------------QNGSNDSCL 279
+EEL+ L E +G+ +RG S T+ T P YK T+ +
Sbjct: 880 FEELIHLEERLGNVNRGASQGTIERCTYPH-KYKKVTTDWFSQRKLHCKQDGEEGTEEDT 938
Query: 280 GFSCVICRLDYEDGETLTVLSCKHSYHSECINNWLKINKVCPVCSAEV 327
C IC E+GE + L C H +H C++ WL NK CP+C ++
Sbjct: 939 EEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 986
>sp|Q8LPN7|RNG1L_ARATH E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana
GN=At3g19950 PE=2 SV=1
Length = 328
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 283 CVICRLDYEDGETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVST 329
C +C ++EDG + + CKH +H +C+ WL+++ CPVC E+ T
Sbjct: 216 CAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPT 262
>sp|Q9FIR0|ATL30_ARATH RING-H2 finger protein ATL30 OS=Arabidopsis thaliana GN=ATL30 PE=2
SV=1
Length = 289
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 280 GFSCVICRLDYEDGETLTVL--SCKHSYHSECINNWLKINKVCPVC 323
G C IC L++E+ L L +C H +H ECI+ WL+ NK CPVC
Sbjct: 111 GLECAICLLEFEEEHILLRLLTTCYHVFHQECIDQWLESNKTCPVC 156
>sp|O22755|ATL44_ARATH RING-H2 finger protein ATL44 OS=Arabidopsis thaliana GN=ATL44 PE=2
SV=1
Length = 185
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 247 SESRGLSADTLATLPTVNYKGGTSQNGS----NDSCLGFSCVICRLDYEDGETLTVLS-C 301
S ++GL L +LP + S +G+ DS C IC D+ DGE + VL C
Sbjct: 65 SPNKGLKKKALQSLPRSTFTAAESTSGAAAEEGDS---TECAICLTDFADGEEIRVLPLC 121
Query: 302 KHSYHSECINNWLKINKVCPVC 323
HS+H ECI+ WL CP C
Sbjct: 122 GHSFHVECIDKWLVSRSSCPSC 143
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.306 0.127 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 143,627,833
Number of Sequences: 539616
Number of extensions: 7257162
Number of successful extensions: 129291
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1571
Number of HSP's successfully gapped in prelim test: 1374
Number of HSP's that attempted gapping in prelim test: 56154
Number of HSP's gapped (non-prelim): 31912
length of query: 333
length of database: 191,569,459
effective HSP length: 118
effective length of query: 215
effective length of database: 127,894,771
effective search space: 27497375765
effective search space used: 27497375765
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 61 (28.1 bits)