Query 019984
Match_columns 333
No_of_seqs 230 out of 1731
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 06:06:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019984.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019984hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1581 UDP-galactose transpor 100.0 1.5E-53 3.3E-58 378.6 26.0 296 13-310 9-326 (327)
2 KOG1580 UDP-galactose transpor 100.0 2.4E-47 5.1E-52 327.1 16.7 300 12-315 7-331 (337)
3 PF08449 UAA: UAA transporter 100.0 7.3E-41 1.6E-45 312.0 28.0 279 19-303 1-303 (303)
4 KOG1582 UDP-galactose transpor 100.0 1.4E-36 3.1E-41 265.6 15.9 276 11-300 36-335 (367)
5 TIGR00817 tpt Tpt phosphate/ph 100.0 1.4E-27 2.9E-32 222.6 24.8 270 17-305 1-301 (302)
6 PTZ00343 triose or hexose phos 100.0 1.3E-26 2.8E-31 220.0 28.4 267 14-299 45-350 (350)
7 KOG1583 UDP-N-acetylglucosamin 99.9 1.3E-27 2.8E-32 210.1 12.6 264 18-298 3-315 (330)
8 KOG1441 Glucose-6-phosphate/ph 99.9 1.6E-26 3.6E-31 212.8 9.4 274 12-305 11-315 (316)
9 PF06027 DUF914: Eukaryotic pr 99.9 6.9E-23 1.5E-27 191.0 23.3 245 52-303 40-311 (334)
10 PLN00411 nodulin MtN21 family 99.9 1.1E-19 2.4E-24 172.5 28.3 276 14-300 9-331 (358)
11 KOG1443 Predicted integral mem 99.8 4.1E-19 8.8E-24 158.9 19.6 257 24-300 22-318 (349)
12 PRK11272 putative DMT superfam 99.8 8.2E-18 1.8E-22 156.1 26.9 259 15-300 5-288 (292)
13 PRK11453 O-acetylserine/cystei 99.8 1.7E-17 3.6E-22 154.5 29.0 186 107-300 102-290 (299)
14 PRK11689 aromatic amino acid e 99.8 4.6E-18 1E-22 157.9 24.7 184 107-300 107-290 (295)
15 TIGR00950 2A78 Carboxylate/Ami 99.8 4.4E-17 9.5E-22 148.2 23.3 170 107-292 89-259 (260)
16 KOG1444 Nucleotide-sugar trans 99.8 3.5E-17 7.6E-22 148.3 20.2 255 34-307 28-310 (314)
17 PRK10532 threonine and homoser 99.8 3.8E-16 8.3E-21 144.9 26.9 254 17-299 11-283 (293)
18 PRK15430 putative chlorampheni 99.7 4.9E-16 1.1E-20 144.5 23.9 253 14-297 4-285 (296)
19 PF03151 TPT: Triose-phosphate 99.7 5.3E-16 1.2E-20 129.8 14.5 141 157-297 1-153 (153)
20 KOG1442 GDP-fucose transporter 99.6 3.3E-16 7.2E-21 138.2 6.9 252 50-309 56-339 (347)
21 KOG2234 Predicted UDP-galactos 99.6 3.8E-13 8.2E-18 123.9 26.5 191 107-302 134-327 (345)
22 COG5070 VRG4 Nucleotide-sugar 99.6 2.3E-15 5E-20 129.3 11.2 261 35-307 23-306 (309)
23 TIGR03340 phn_DUF6 phosphonate 99.6 4.6E-14 1E-18 130.2 18.2 170 107-294 105-280 (281)
24 PF04142 Nuc_sug_transp: Nucle 99.6 9.5E-14 2.1E-18 125.2 18.1 178 107-288 59-244 (244)
25 COG0697 RhaT Permeases of the 99.6 3E-12 6.5E-17 117.4 27.7 173 107-298 112-288 (292)
26 TIGR00803 nst UDP-galactose tr 99.6 1E-14 2.2E-19 130.0 10.8 177 112-295 45-222 (222)
27 KOG2766 Predicted membrane pro 99.5 2E-15 4.3E-20 132.1 0.8 201 84-297 75-299 (336)
28 KOG3912 Predicted integral mem 99.4 7.3E-12 1.6E-16 111.3 17.8 190 107-297 128-334 (372)
29 TIGR00776 RhaT RhaT L-rhamnose 99.4 8.3E-11 1.8E-15 109.0 23.9 175 107-298 102-289 (290)
30 COG2962 RarD Predicted permeas 99.3 1.2E-09 2.7E-14 98.3 24.3 173 107-301 114-287 (293)
31 TIGR00688 rarD rarD protein. T 99.3 1.1E-09 2.4E-14 99.6 23.4 219 21-272 5-255 (256)
32 KOG4510 Permease of the drug/m 99.3 3.1E-12 6.7E-17 113.0 4.4 189 107-302 139-330 (346)
33 KOG2765 Predicted membrane pro 99.2 2.9E-10 6.2E-15 105.1 11.5 189 107-300 201-393 (416)
34 COG5006 rhtA Threonine/homoser 99.1 3.6E-08 7.9E-13 86.9 21.2 219 55-293 40-278 (292)
35 PF00892 EamA: EamA-like trans 99.0 1.7E-09 3.7E-14 86.5 9.8 123 167-296 2-125 (126)
36 COG2510 Predicted membrane pro 99.0 6.9E-10 1.5E-14 87.8 7.1 134 158-296 5-138 (140)
37 PRK15430 putative chlorampheni 98.9 1.3E-07 2.8E-12 87.9 16.7 139 153-295 5-143 (296)
38 TIGR00688 rarD rarD protein. T 98.8 1.8E-07 3.8E-12 85.1 15.4 136 157-295 3-140 (256)
39 TIGR03340 phn_DUF6 phosphonate 98.5 1.4E-06 3.1E-11 80.3 12.9 132 158-296 3-134 (281)
40 PLN00411 nodulin MtN21 family 98.4 5.1E-06 1.1E-10 79.2 14.2 139 156-298 13-157 (358)
41 PF06800 Sugar_transport: Suga 98.3 0.0002 4.3E-09 65.1 20.9 171 107-292 88-266 (269)
42 PF13536 EmrE: Multidrug resis 98.3 2.1E-05 4.5E-10 62.4 12.1 102 195-299 6-108 (113)
43 PRK02971 4-amino-4-deoxy-L-ara 98.2 3.1E-05 6.6E-10 63.0 12.9 119 156-298 2-123 (129)
44 COG2962 RarD Predicted permeas 98.2 3.9E-05 8.4E-10 69.6 13.3 140 154-298 5-145 (293)
45 TIGR00950 2A78 Carboxylate/Ami 98.2 2.6E-05 5.7E-10 70.6 12.4 116 169-296 2-118 (260)
46 PRK11272 putative DMT superfam 98.2 5.6E-05 1.2E-09 70.1 14.7 127 160-296 12-140 (292)
47 PF08449 UAA: UAA transporter 98.0 0.00011 2.4E-09 68.6 13.6 131 169-306 13-145 (303)
48 TIGR00817 tpt Tpt phosphate/ph 98.0 0.00012 2.6E-09 68.1 13.6 123 167-295 13-135 (302)
49 PTZ00343 triose or hexose phos 97.9 0.0002 4.2E-09 68.3 14.0 133 159-296 52-185 (350)
50 PRK11689 aromatic amino acid e 97.9 0.00017 3.7E-09 66.9 13.3 128 157-296 5-136 (295)
51 PRK11453 O-acetylserine/cystei 97.9 0.00024 5.2E-09 66.1 13.9 123 159-296 7-131 (299)
52 PRK15051 4-amino-4-deoxy-L-ara 97.7 0.00018 3.9E-09 56.9 8.2 59 237-295 49-107 (111)
53 TIGR00776 RhaT RhaT L-rhamnose 97.7 0.00047 1E-08 64.0 12.0 131 157-298 2-137 (290)
54 KOG4314 Predicted carbohydrate 97.7 0.0002 4.4E-09 61.3 8.3 174 107-295 95-274 (290)
55 PF04142 Nuc_sug_transp: Nucle 97.5 0.0004 8.8E-09 62.7 8.5 71 232-302 24-94 (244)
56 PF06027 DUF914: Eukaryotic pr 97.5 0.0018 4E-08 61.0 13.0 75 224-298 78-152 (334)
57 COG0697 RhaT Permeases of the 97.5 0.0043 9.3E-08 56.4 15.0 141 154-300 5-146 (292)
58 COG2510 Predicted membrane pro 97.4 0.00065 1.4E-08 54.2 7.3 83 54-136 30-138 (140)
59 PRK13499 rhamnose-proton sympo 97.3 0.0043 9.3E-08 58.6 13.1 145 153-305 4-161 (345)
60 PF00892 EamA: EamA-like trans 97.3 0.00082 1.8E-08 53.1 7.3 30 107-136 96-125 (126)
61 PF04657 DUF606: Protein of un 97.1 0.015 3.3E-07 47.7 13.0 129 159-294 4-138 (138)
62 PRK10532 threonine and homoser 97.1 0.013 2.9E-07 54.2 14.0 125 154-294 10-134 (293)
63 PF05653 Mg_trans_NIPA: Magnes 97.0 0.00056 1.2E-08 63.7 3.8 79 220-299 208-294 (300)
64 PRK10452 multidrug efflux syst 97.0 0.0042 9.2E-08 49.7 8.3 62 237-298 42-104 (120)
65 PRK09541 emrE multidrug efflux 96.9 0.015 3.1E-07 45.9 9.9 61 238-298 43-104 (110)
66 PF13536 EmrE: Multidrug resis 96.8 0.0068 1.5E-07 47.8 8.1 33 107-139 76-108 (113)
67 PF06800 Sugar_transport: Suga 96.7 0.013 2.8E-07 53.4 9.7 117 182-304 8-129 (269)
68 PRK10650 multidrug efflux syst 96.6 0.034 7.3E-07 43.7 10.3 59 237-295 47-106 (109)
69 PF05653 Mg_trans_NIPA: Magnes 96.5 0.011 2.5E-07 55.0 8.3 120 152-297 3-122 (300)
70 KOG2234 Predicted UDP-galactos 96.5 0.11 2.3E-06 48.8 14.4 111 184-296 45-163 (345)
71 PRK11431 multidrug efflux syst 96.4 0.02 4.3E-07 44.7 7.9 59 237-295 41-100 (105)
72 COG2076 EmrE Membrane transpor 96.3 0.051 1.1E-06 42.3 9.4 60 237-296 42-102 (106)
73 KOG4510 Permease of the drug/m 96.1 0.002 4.4E-08 57.8 0.8 68 232-299 104-171 (346)
74 PRK13499 rhamnose-proton sympo 95.9 1.1 2.3E-05 42.6 18.2 189 107-297 116-341 (345)
75 PF00893 Multi_Drug_Res: Small 95.7 0.03 6.6E-07 42.7 5.7 52 237-288 41-93 (93)
76 COG3238 Uncharacterized protei 95.3 0.47 1E-05 39.4 11.8 133 155-296 4-145 (150)
77 PF03151 TPT: Triose-phosphate 94.7 0.4 8.8E-06 39.3 10.2 29 107-135 123-151 (153)
78 KOG2765 Predicted membrane pro 94.5 0.059 1.3E-06 50.8 4.9 81 229-309 163-243 (416)
79 PF07857 DUF1632: CEO family ( 94.2 0.14 3E-06 46.5 6.6 68 237-304 67-141 (254)
80 COG4975 GlcU Putative glucose 94.0 0.032 7E-07 49.7 2.1 132 157-300 3-139 (288)
81 PRK15051 4-amino-4-deoxy-L-ara 94.0 0.099 2.1E-06 41.2 4.7 30 107-136 79-108 (111)
82 KOG1581 UDP-galactose transpor 94.0 0.81 1.8E-05 42.2 11.0 127 169-302 27-160 (327)
83 PRK09541 emrE multidrug efflux 93.7 1 2.2E-05 35.5 9.8 32 107-138 73-104 (110)
84 PF10639 UPF0546: Uncharacteri 92.7 0.15 3.2E-06 40.3 3.7 60 235-294 51-111 (113)
85 KOG2922 Uncharacterized conser 92.7 0.79 1.7E-05 42.6 8.9 171 107-295 106-304 (335)
86 PF06379 RhaT: L-rhamnose-prot 92.2 2.9 6.2E-05 39.4 12.1 146 152-305 3-161 (344)
87 KOG1441 Glucose-6-phosphate/ph 91.3 0.37 8.1E-06 45.1 5.3 129 164-296 25-154 (316)
88 PRK10650 multidrug efflux syst 91.2 3.9 8.4E-05 32.1 10.2 29 107-135 78-106 (109)
89 COG2076 EmrE Membrane transpor 90.9 1.7 3.6E-05 33.9 7.7 32 107-138 73-104 (106)
90 PRK10452 multidrug efflux syst 90.0 0.48 1E-05 37.9 4.1 33 107-139 73-105 (120)
91 COG4975 GlcU Putative glucose 89.7 0.11 2.4E-06 46.4 0.3 174 107-296 102-284 (288)
92 PF04657 DUF606: Protein of un 88.6 3.3 7.2E-05 33.9 8.3 81 54-134 29-138 (138)
93 PRK11431 multidrug efflux syst 86.4 0.96 2.1E-05 35.3 3.6 32 107-138 72-103 (105)
94 KOG3912 Predicted integral mem 86.2 1.1 2.4E-05 41.0 4.4 67 232-298 93-159 (372)
95 KOG2766 Predicted membrane pro 86.2 0.38 8.2E-06 43.3 1.4 137 152-298 14-151 (336)
96 KOG4314 Predicted carbohydrate 85.3 0.56 1.2E-05 40.6 2.0 62 237-298 65-126 (290)
97 COG3238 Uncharacterized protei 83.9 10 0.00022 31.6 8.7 84 53-136 32-145 (150)
98 KOG1580 UDP-galactose transpor 83.3 2 4.4E-05 38.3 4.6 63 240-302 100-162 (337)
99 PRK02971 4-amino-4-deoxy-L-ara 83.0 1.8 4E-05 35.0 4.0 28 111-138 96-123 (129)
100 KOG2922 Uncharacterized conser 75.2 1.1 2.4E-05 41.7 0.5 118 152-296 17-135 (335)
101 COG1742 Uncharacterized conser 72.9 20 0.00043 27.8 6.7 33 107-139 74-106 (109)
102 PF07168 Ureide_permease: Urei 71.4 4.4 9.5E-05 37.6 3.4 64 232-298 79-147 (336)
103 KOG1444 Nucleotide-sugar trans 67.4 85 0.0018 29.4 10.9 129 158-294 14-146 (314)
104 TIGR00803 nst UDP-galactose tr 64.5 54 0.0012 28.6 9.0 28 107-134 194-221 (222)
105 PF04342 DUF486: Protein of un 63.7 4.1 8.9E-05 31.6 1.4 29 266-294 77-105 (108)
106 PF04341 DUF485: Protein of un 63.0 35 0.00075 25.7 6.4 64 17-82 19-82 (91)
107 PRK02237 hypothetical protein; 62.5 67 0.0015 25.1 7.8 48 252-299 60-107 (109)
108 PRK02237 hypothetical protein; 61.6 10 0.00022 29.6 3.2 32 107-138 75-106 (109)
109 PF02694 UPF0060: Uncharacteri 61.2 77 0.0017 24.7 8.6 32 107-138 73-104 (107)
110 PF10639 UPF0546: Uncharacteri 61.0 13 0.00029 29.3 3.9 29 107-135 84-112 (113)
111 COG3169 Uncharacterized protei 59.0 5.8 0.00013 30.3 1.4 29 266-294 84-112 (116)
112 PF02694 UPF0060: Uncharacteri 55.9 52 0.0011 25.6 6.2 47 253-299 59-105 (107)
113 PF05961 Chordopox_A13L: Chord 55.2 11 0.00024 26.6 2.2 25 282-306 7-32 (68)
114 PF00893 Multi_Drug_Res: Small 54.9 16 0.00036 27.5 3.4 22 107-128 72-93 (93)
115 PF12606 RELT: Tumour necrosis 53.2 15 0.00032 24.5 2.4 32 283-314 7-40 (50)
116 PRK13108 prolipoprotein diacyl 51.6 76 0.0017 31.5 8.2 24 277-300 254-277 (460)
117 KOG1582 UDP-galactose transpor 44.5 1.3E+02 0.0028 27.8 7.8 33 107-139 302-334 (367)
118 PF06946 Phage_holin_5: Phage 43.9 1.1E+02 0.0024 23.2 6.1 63 243-305 22-88 (93)
119 PRK10921 twin-arginine protein 43.7 2.3E+02 0.0049 25.8 9.5 32 242-273 174-208 (258)
120 PF04277 OAD_gamma: Oxaloaceta 42.3 24 0.00052 25.5 2.5 9 282-290 9-17 (79)
121 PF15471 TMEM171: Transmembran 42.1 15 0.00033 33.3 1.6 38 279-316 161-199 (319)
122 PF06379 RhaT: L-rhamnose-prot 40.0 3.4E+02 0.0073 25.9 16.8 59 118-176 134-193 (344)
123 PRK06638 NADH:ubiquinone oxido 39.1 2.6E+02 0.0056 24.3 11.9 24 185-208 55-78 (198)
124 PF04342 DUF486: Protein of un 39.0 1.5E+02 0.0033 23.1 6.4 27 107-133 78-104 (108)
125 PF08507 COPI_assoc: COPI asso 37.8 38 0.00083 27.4 3.3 9 284-292 92-100 (136)
126 KOG4112 Signal peptidase subun 36.9 59 0.0013 24.6 3.8 44 14-71 25-68 (101)
127 PHA03049 IMV membrane protein; 36.8 30 0.00065 24.4 2.0 36 282-317 7-44 (68)
128 KOG1442 GDP-fucose transporter 36.3 11 0.00023 34.7 -0.3 55 240-294 117-171 (347)
129 COG5006 rhtA Threonine/homoser 36.0 37 0.0008 30.9 3.0 32 107-138 252-283 (292)
130 PF05545 FixQ: Cbb3-type cytoc 34.3 12 0.00026 24.6 -0.2 19 286-304 19-37 (49)
131 TIGR00892 2A0113 monocarboxyla 33.7 4.3E+02 0.0093 25.6 10.6 21 304-324 432-452 (455)
132 COG3162 Predicted membrane pro 33.2 2.3E+02 0.0049 21.8 6.7 57 17-76 27-84 (102)
133 PF11346 DUF3149: Protein of u 28.6 22 0.00049 22.7 0.3 29 273-301 7-36 (42)
134 PF04971 Lysis_S: Lysis protei 28.4 24 0.00052 25.1 0.5 20 289-308 46-65 (68)
135 cd01324 cbb3_Oxidase_CcoQ Cyto 27.6 12 0.00026 24.7 -1.1 22 285-306 19-40 (48)
136 KOG1583 UDP-N-acetylglucosamin 26.8 42 0.0009 31.0 1.8 41 263-303 103-143 (330)
137 PF01102 Glycophorin_A: Glycop 24.9 35 0.00076 27.3 0.9 11 294-304 85-95 (122)
138 COG4736 CcoQ Cbb3-type cytochr 24.7 30 0.00065 24.0 0.4 27 283-309 16-42 (60)
139 PF04478 Mid2: Mid2 like cell 23.8 62 0.0013 26.9 2.2 12 320-331 111-122 (154)
140 PF05977 MFS_3: Transmembrane 22.4 8.1E+02 0.018 24.7 15.3 26 247-272 342-367 (524)
141 COG2116 FocA Formate/nitrite f 22.3 6.1E+02 0.013 23.2 9.6 27 113-139 56-82 (265)
142 PF03348 Serinc: Serine incorp 22.2 7.2E+02 0.016 24.4 9.6 24 276-299 282-305 (429)
143 COG3169 Uncharacterized protei 21.8 1.1E+02 0.0025 23.4 3.1 29 107-135 85-113 (116)
144 PF05297 Herpes_LMP1: Herpesvi 21.8 30 0.00066 31.8 0.0 73 111-193 71-143 (381)
145 PRK12437 prolipoprotein diacyl 21.7 53 0.0011 30.1 1.6 23 277-299 235-257 (269)
146 PRK13108 prolipoprotein diacyl 21.3 3.6E+02 0.0079 26.8 7.3 22 117-138 254-275 (460)
No 1
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-53 Score=378.63 Aligned_cols=296 Identities=47% Similarity=0.825 Sum_probs=276.0
Q ss_pred ccchhhHHHHHHHHHHHHHHHHhhhhccccccCCCCCCceeehHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhhHHH
Q 019984 13 DSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCL 92 (333)
Q Consensus 13 ~~~~~~~~~~~~gi~~~~~~~~~~qe~i~~~~~~~~~~~f~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 92 (333)
.++.+++++|+.|||++|++||++||+|+|++||+++++|.+|.|+.++|.+++.++++.++.+++++.+++.|++.|..
T Consensus 9 ~~~~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~apl~~y~~ 88 (327)
T KOG1581|consen 9 ANKIILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKKELSGVAPLYKYSL 88 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhHHhH
Confidence 46789999999999999999999999999999999999999999999999999999999988888877888999999999
Q ss_pred HHHHHHhhhhhhHH----------------------HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCC
Q 019984 93 VSMSNILTTTCQYE----------------------IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKG 150 (333)
Q Consensus 93 ~s~~~~~a~~~~~~----------------------ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~ 150 (333)
+|++|..+..|+|+ +++.++.|+||++.+|++..++.+||.+|.+.+.+ + +++..+
T Consensus 89 is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s-~-s~~~~g 166 (327)
T KOG1581|consen 89 ISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNS-D-SSSKSG 166 (327)
T ss_pred HHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCC-C-CccccC
Confidence 99999999888866 88999999999999999999999999999988543 2 233445
Q ss_pred CcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHH
Q 019984 151 RENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVAL 230 (333)
Q Consensus 151 ~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~ 230 (333)
.+++++|+.++..++++||+++..||+++++++++++++|+++|++++++....++..|...++++|...||+.++++++
T Consensus 167 ~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l 246 (327)
T KOG1581|consen 167 RENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILL 246 (327)
T ss_pred CCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999998888999998999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhccccCCCCCCCC
Q 019984 231 LSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPRPSEH 310 (333)
Q Consensus 231 l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~~~~~~~~~~~ 310 (333)
++.++++||.|+|++++++||++.++++++|+++++++|+++|||++++.||+|..+|++|+++..+.|+|++++.++|+
T Consensus 247 ~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~~~~~~~k~~ 326 (327)
T KOG1581|consen 247 YSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKKKNQPRKKKA 326 (327)
T ss_pred HHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHhccCcccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988666655554
No 2
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.4e-47 Score=327.15 Aligned_cols=300 Identities=28% Similarity=0.437 Sum_probs=261.1
Q ss_pred CccchhhHHHHHHHHHHHHHHHHhhhhccccccCC---CCCCceeehHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCchh
Q 019984 12 KDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYG---ADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVY 88 (333)
Q Consensus 12 ~~~~~~~~~~~~~gi~~~~~~~~~~qe~i~~~~~~---~~~~~f~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (333)
.-++..++.+|++||+.||..|||.||+|++-+|| +++++|+|.+.++|+||.++.+++-++...+++...++.|-+
T Consensus 7 ~lper~rf~ica~GifvCYF~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~~~~D~t~~~ 86 (337)
T KOG1580|consen 7 WLPERGRFLICAGGIFVCYFVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRKKTEIDNTPTK 86 (337)
T ss_pred ccccccceeEEecchhheehhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheeecccccccCCcch
Confidence 34566789999999999999999999999999997 456799999999999999999999776655554556678899
Q ss_pred hHHHHHHHHHhhhhh--------hHH--------------HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCC
Q 019984 89 KYCLVSMSNILTTTC--------QYE--------------IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSP 146 (333)
Q Consensus 89 ~y~~~s~~~~~a~~~--------~~~--------------ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~ 146 (333)
.|+.+|+++..+|.. .|| +++.++.+|+|+|++|.++++++.||+++.+.+++ .
T Consensus 87 ~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~K--v-- 162 (337)
T KOG1580|consen 87 MYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENK--V-- 162 (337)
T ss_pred HHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccc--c--
Confidence 999999998877743 244 89999999999999999999999999999998432 1
Q ss_pred CCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHH
Q 019984 147 YSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFF 226 (333)
Q Consensus 147 ~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 226 (333)
....++...+|-++.++|+.+||+++..|||+.+.|..+..+||+|+|+++++.+...++++||+++.+.|..+||.+|+
T Consensus 163 ~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~ 242 (337)
T KOG1580|consen 163 GGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFW 242 (337)
T ss_pred CCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHH
Confidence 11123567889999999999999999999999998888899999999999999988888999999998899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhccccCCCC
Q 019984 227 DVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPR 306 (333)
Q Consensus 227 ~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~~~~~~~ 306 (333)
++.++++++.+||.|+|.++..+||+++|++++.|++++++.|+++|+||++.+||+|..+++.|+.......++.++..
T Consensus 243 ~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~GK~a~~t~ 322 (337)
T KOG1580|consen 243 DLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDGKKAPMTA 322 (337)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcCCcCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999988876655444444
Q ss_pred CCCCCCccc
Q 019984 307 PSEHPMENM 315 (333)
Q Consensus 307 ~~~~~~~~~ 315 (333)
++|.+.|++
T Consensus 323 akkp~~~~~ 331 (337)
T KOG1580|consen 323 AKKPLAATE 331 (337)
T ss_pred ccCCCcCCC
Confidence 444444443
No 3
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=100.00 E-value=7.3e-41 Score=311.95 Aligned_cols=279 Identities=35% Similarity=0.544 Sum_probs=244.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhccccccCCCCCCceeehHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhhHHHHHHHHH
Q 019984 19 MIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNI 98 (333)
Q Consensus 19 ~~~~~~gi~~~~~~~~~~qe~i~~~~~~~~~~~f~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~s~~~~ 98 (333)
+++|++|+|++|+.|+++||++++++++. ++|++++++|++++.+++.+.....+.+.+++.|+++|++.++.+.
T Consensus 1 ~~~~~~~i~~~~~~~g~~qE~i~~~~~~~-----~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (303)
T PF08449_consen 1 FLICVAGIFGGCCSYGILQEKIMTTPYGS-----PFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKYAILSFLFF 75 (303)
T ss_pred CEeeHHHHHHHHHHHHHHHHHHHcCCCCC-----cccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHHHHHHHHHH
Confidence 36899999999999999999999987752 7999999999999999998877665545667899999999988877
Q ss_pred hhhhhh--------HH--------------HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHH
Q 019984 99 LTTTCQ--------YE--------------IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVW 156 (333)
Q Consensus 99 ~a~~~~--------~~--------------ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~ 156 (333)
.++.++ || +++.+++||||+++||++++++++|++++..++...+. ..+........
T Consensus 76 ~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~-~~~~~~~~~~~ 154 (303)
T PF08449_consen 76 LASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSS-SSNSSSFSSAL 154 (303)
T ss_pred HHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccc-ccccccccchh
Confidence 665443 33 78999999999999999999999999999988542211 11111122345
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHh--cCchhHHHHhhhhChHhHHHHHHHHHH
Q 019984 157 GVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLIL--EGHLFLAIDFVYHHLDCFFDVALLSTV 234 (333)
Q Consensus 157 G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~il~l~~~ 234 (333)
|++++++|.++||+++++|||++++++.++.++++|+|++++++.++..+. +++..+..++...+|..+.+++..+++
T Consensus 155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~ 234 (303)
T PF08449_consen 155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLT 234 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998887766 788888888888999999999999999
Q ss_pred HHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhccccC
Q 019984 235 ATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSE 303 (333)
Q Consensus 235 ~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~~~~ 303 (333)
++++|.+++++++++||++.++++++||++++++|+++|||++++.||+|+++++.|+.++.+.|+|||
T Consensus 235 ~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~~ 303 (303)
T PF08449_consen 235 GALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKKN 303 (303)
T ss_pred HHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccCC
Confidence 999999999999999999999999999999999999999999999999999999999999999998875
No 4
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-36 Score=265.64 Aligned_cols=276 Identities=27% Similarity=0.383 Sum_probs=243.6
Q ss_pred CCccchhhHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcee-ehHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhh
Q 019984 11 VKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFK-YSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYK 89 (333)
Q Consensus 11 ~~~~~~~~~~~~~~gi~~~~~~~~~~qe~i~~~~~~~~~~~f~-~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (333)
.+++++.|+++|.+|+++.|+.||++||.+++.+ .|+ |.|+++++|.++.+.++++.+... +.+++..|||.
T Consensus 36 s~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~------gfkp~GWylTlvQf~~Ysg~glie~~~~-~~k~r~iP~rt 108 (367)
T KOG1582|consen 36 SDKPKWTQFLICSAGVFFLYLVYGYLQELIFNVE------GFKPFGWYLTLVQFLVYSGFGLIELQLI-QTKRRVIPWRT 108 (367)
T ss_pred ccCchhhhHHHHHhHHHHHHHHHHHHHHHHhccc------cCcccchHHHHHHHHHHHhhhheEEEee-cccceecchhH
Confidence 4678899999999999999999999999999653 565 999999999999988887755432 23466799999
Q ss_pred HHHHHHHHHhhh--------hhhHH--------------HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCC
Q 019984 90 YCLVSMSNILTT--------TCQYE--------------IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPY 147 (333)
Q Consensus 90 y~~~s~~~~~a~--------~~~~~--------------ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~ 147 (333)
|..+|...+..+ +++|| +.+.++-++||.+.++.+..+.++|++++++.|+ +.+
T Consensus 109 Y~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs--~~s-- 184 (367)
T KOG1582|consen 109 YVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADS--QTS-- 184 (367)
T ss_pred hhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhccc--ccC--
Confidence 988876554433 55666 6788899999999999999999999999999853 222
Q ss_pred CCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChH-hHH
Q 019984 148 SKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLD-CFF 226 (333)
Q Consensus 148 ~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~ 226 (333)
..++..|+.++..++++||+.+..||+.++.++-+..|+.+|...++.++.+..+..+|++..++.+...||. ...
T Consensus 185 ---PNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyG 261 (367)
T KOG1582|consen 185 ---PNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYG 261 (367)
T ss_pred ---CCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHH
Confidence 3688999999999999999999999999999988889999999999999998888999999999999999886 666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhcc
Q 019984 227 DVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKK 300 (333)
Q Consensus 227 ~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~ 300 (333)
..++.+..+++|+.+....++.+||.+++.+++.||.+++++|+++|.+|+|.++.-|..+++.|+++..+.|+
T Consensus 262 y~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~ 335 (367)
T KOG1582|consen 262 YAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKR 335 (367)
T ss_pred HHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCC
Confidence 66777999999999999999999999999999999999999999999999999999999999999999888873
No 5
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.96 E-value=1.4e-27 Score=222.55 Aligned_cols=270 Identities=14% Similarity=0.100 Sum_probs=198.0
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhccccccCCCCCCceeehHHHHHHHHHHHHHHHHHHHHHh-cCC-CCCCCchhhHHHHH
Q 019984 17 LKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIAS-RKA-IDPVAPVYKYCLVS 94 (333)
Q Consensus 17 ~~~~~~~~gi~~~~~~~~~~qe~i~~~~~~~~~~~f~~p~~l~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~y~~~s 94 (333)
++....+..||.++..++++||.+. +.|++|+++++.|++++++...+.+... +++ ..++.+++..++++
T Consensus 1 ~~~~~~~~~w~~~~~~~~~~NK~~l--------~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 72 (302)
T TIGR00817 1 LQTGLLFGLWYFLNVYFNIYNKKLL--------NVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVA 72 (302)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHH--------hhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 4678889999999999999999998 2478999999999999887766543221 111 11223445556666
Q ss_pred HHHHhhhhhh------------------HH----HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCc
Q 019984 95 MSNILTTTCQ------------------YE----IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRE 152 (333)
Q Consensus 95 ~~~~~a~~~~------------------~~----ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~ 152 (333)
+.+.....+. .| +++++++|||++++++++++++++|+++.... +. +
T Consensus 73 ~~~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~----~~-------~ 141 (302)
T TIGR00817 73 IVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDT----EL-------S 141 (302)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCC----cc-------c
Confidence 5543222111 11 78999999999999999999999999876432 21 3
Q ss_pred chHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchh-HHHHhhh----hChHhHHH
Q 019984 153 NTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLF-LAIDFVY----HHLDCFFD 227 (333)
Q Consensus 153 ~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~----~~~~~~~~ 227 (333)
++..|+++++++.++++++.++.||..++.+.|+.+.+.|+++++.+.++|.....++.. ...++.. ..+.....
T Consensus 142 ~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (302)
T TIGR00817 142 FNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYT 221 (302)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHH
Confidence 457899999999999999999999987755678899999999999988888755433211 1111100 01111121
Q ss_pred -HHHHHH-HHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhccccCCC
Q 019984 228 -VALLST-VATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKP 305 (333)
Q Consensus 228 -il~l~~-~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~~~~~~ 305 (333)
.+..+. +....+.+.+++++++||+++++.++++|++++++|++++||++|+.+++|.++++.|+++++..|+||+|+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~~~~ 301 (302)
T TIGR00817 222 VSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKPKP 301 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccCcCC
Confidence 222222 333445567789999999999999999999999999999999999999999999999999999877655554
No 6
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.96 E-value=1.3e-26 Score=219.98 Aligned_cols=267 Identities=13% Similarity=0.104 Sum_probs=200.1
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhhhccccccCCCCCCceeehHHHHHHHHHHHHHHHHHHHHHhcCCCCC----CCchhh
Q 019984 14 SRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDP----VAPVYK 89 (333)
Q Consensus 14 ~~~~~~~~~~~gi~~~~~~~~~~qe~i~~~~~~~~~~~f~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 89 (333)
+..+|++.++..||.++..+.+.+|.+. +.+++|++++++|++++++++.+.+....++.++ +..++.
T Consensus 45 ~~~~~~~~~~~~wy~~s~~~~~~nK~vl--------~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (350)
T PTZ00343 45 NFKWKLALLFLTWYALNVLYVVDNKLAL--------NMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKN 116 (350)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHH--------HhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 4479999999999999999999999998 3478999999999999988776654332121111 123456
Q ss_pred HHHHHHHHHhhhh-------------hh-----HH----HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCC
Q 019984 90 YCLVSMSNILTTT-------------CQ-----YE----IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPY 147 (333)
Q Consensus 90 y~~~s~~~~~a~~-------------~~-----~~----ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~ 147 (333)
.+++++.+..... .+ .| +++++++|||++++++++++++++|+++.+.+ |.
T Consensus 117 llp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~----~~--- 189 (350)
T PTZ00343 117 FLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVK----EL--- 189 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecc----cc---
Confidence 6677765432211 00 11 88999999999999999999999999998754 32
Q ss_pred CCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCC-----CChHHHHHHhhHHHHHHHHHHHH-hcCch-hHHHH-h--
Q 019984 148 SKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYD-----MEIHNQIFYTTLCSCVLSLSGLI-LEGHL-FLAID-F-- 217 (333)
Q Consensus 148 ~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~g~~-~~~~~-~-- 217 (333)
+.+..|++++++|.+++++++++.|+++++++ .++.+...++.+++.++++|... .|+.. ..... .
T Consensus 190 ----~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~ 265 (350)
T PTZ00343 190 ----HFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTA 265 (350)
T ss_pred ----hhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhh
Confidence 45788999999999999999999999987653 56777777888999998888754 44321 11110 0
Q ss_pred -hhhC--hHhHHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhh
Q 019984 218 -VYHH--LDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYT 294 (333)
Q Consensus 218 -~~~~--~~~~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~ 294 (333)
.... ...+..++..+++..+.+.+.|+++++++|+++++.+++||++++++|++++||++|+.|++|.+++++|+++
T Consensus 266 ~~~~~~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~l 345 (350)
T PTZ00343 266 NMTNYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALL 345 (350)
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHH
Confidence 0000 1111122222444445556777899999999999999999999999999999999999999999999999999
Q ss_pred hhhhc
Q 019984 295 RSFFK 299 (333)
Q Consensus 295 ~~~~k 299 (333)
|++.|
T Consensus 346 Ys~~k 350 (350)
T PTZ00343 346 YSLFK 350 (350)
T ss_pred HhhcC
Confidence 98764
No 7
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.95 E-value=1.3e-27 Score=210.12 Aligned_cols=264 Identities=20% Similarity=0.311 Sum_probs=195.8
Q ss_pred hHHHHHHHHHHHHHHHHhhhhccccccCCCCCCceeehHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCchhhHHHH---
Q 019984 18 KMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASR-KAIDPVAPVYKYCLV--- 93 (333)
Q Consensus 18 ~~~~~~~gi~~~~~~~~~~qe~i~~~~~~~~~~~f~~p~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~y~~~--- 93 (333)
+.+..+.+++.+++..-+..|.+.+.+.| ++ ..++++|+++-+.-+++.. .+ ...+|++|++.|+.+
T Consensus 3 ~a~~ai~~vf~GCcsnvv~lE~L~~~~pg-sg------NLITFaqFlFia~eGlif~--skf~~~k~kiplk~Y~i~V~m 73 (330)
T KOG1583|consen 3 MAAAAISLVFGGCCSNVVFLELLVRNEPG-SG------NLITFAQFLFIATEGLIFT--SKFFTVKPKIPLKDYAITVAM 73 (330)
T ss_pred hHHHHHHHHHHhhhchHHHHHHHHHhCCC-Ce------eehHHHHHHHHHHhceeee--ccccccCCCCchhhhheehhe
Confidence 44566788999999999999999988765 33 3778888887777776532 33 335688999999753
Q ss_pred ----HHHHHhhhhhhHH----------------HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCC----CC
Q 019984 94 ----SMSNILTTTCQYE----------------IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPY----SK 149 (333)
Q Consensus 94 ----s~~~~~a~~~~~~----------------ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~----~~ 149 (333)
+++|+-+..++.+ +++|++.||||+.+||.+++++++|++++++.++. |.+.+ +.
T Consensus 74 FF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~-d~~~~~~~l~~ 152 (330)
T KOG1583|consen 74 FFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSK-DGRSKLSGLDS 152 (330)
T ss_pred eeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCc-chhhhhccccc
Confidence 4455544333322 89999999999999999999999999999886432 22110 01
Q ss_pred C---Ccc--hHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhh----
Q 019984 150 G---REN--TVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYH---- 220 (333)
Q Consensus 150 ~---~~~--~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---- 220 (333)
+ .+. ..+|+.+...+++.+|..+++||..++|||.++.|.+||++..+.++.+ +..+++.+.+.....
T Consensus 153 ~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Fl---f~~~div~~~~~~~~se~~ 229 (330)
T KOG1583|consen 153 GSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFL---FMGDDIVSHWRLAFKSESY 229 (330)
T ss_pred CcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHH---HhcchHHHHHHHHhcCcce
Confidence 1 122 2458899999999999999999999999999999999999999876554 233344333222211
Q ss_pred --------ChHhHHHHHHHHHHHHHHHH-HHHH---HHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhh
Q 019984 221 --------HLDCFFDVALLSTVATTSQF-FISY---TIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIV 288 (333)
Q Consensus 221 --------~~~~~~~il~l~~~~~l~~~-~~~~---~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lv 288 (333)
-|..|+ +.+++++.|+ |+-. .-.+++++|++++.++||++++++|++.|.+|+|+++|+|.++|
T Consensus 230 ~~p~~g~~vP~~~~----yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lV 305 (330)
T KOG1583|consen 230 LIPLLGFKVPSMWV----YLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALV 305 (330)
T ss_pred eccccCccccHHHH----HHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHH
Confidence 233333 3556677775 3333 35799999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhh
Q 019984 289 FGALYTRSFF 298 (333)
Q Consensus 289 l~Gv~~~~~~ 298 (333)
+.|-.++.-.
T Consensus 306 F~Gt~~fa~~ 315 (330)
T KOG1583|consen 306 FFGTLLFANV 315 (330)
T ss_pred HHHHHHHHHH
Confidence 9986665544
No 8
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.93 E-value=1.6e-26 Score=212.76 Aligned_cols=274 Identities=19% Similarity=0.216 Sum_probs=217.9
Q ss_pred CccchhhHHHHHHHHHHHHHHHHhhhhccccccCCCCCCceeehHHHHHHHHHHHHHHHHHHHHHhcCC----CCCCCch
Q 019984 12 KDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKA----IDPVAPV 87 (333)
Q Consensus 12 ~~~~~~~~~~~~~gi~~~~~~~~~~qe~i~~~~~~~~~~~f~~p~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 87 (333)
..++.++..++..-||+++..+++++|++..+ ..|+||++++.+|.+++.+...+...+ |.. .+++.++
T Consensus 11 ~~~~~~~~~~~~~~w~~~~v~~~~~nK~il~~------~~f~~p~~lt~~~~~~~~l~~~v~~~l-~~~~~~~~~~~~~~ 83 (316)
T KOG1441|consen 11 QLKKILRIGIAFAIWYVLSVGVIILNKYILSK------YGFPFPITLTMLHLFCGALALLVIKVL-KLVPPSKISSKLPL 83 (316)
T ss_pred ccchhHHHHHHHHHHhhhheeeEEeeHhhhcc------CCCCCccHHHHHHHHHHHHHHHHHHHh-cCCCCCccccccch
Confidence 44467888899999999999999999999943 359999999999888887766554333 321 1234567
Q ss_pred hhHHHHHHHHHhhhhhh------------------HH----HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCC
Q 019984 88 YKYCLVSMSNILTTTCQ------------------YE----IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLS 145 (333)
Q Consensus 88 ~~y~~~s~~~~~a~~~~------------------~~----ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~ 145 (333)
+..+++++.+..+..++ .| ++++++.+|++++..++++++++.||++.+.+ |.
T Consensus 84 ~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~----e~- 158 (316)
T KOG1441|consen 84 RTLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVT----EL- 158 (316)
T ss_pred HHHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeec----cc-
Confidence 77777777655433221 11 88999999999999999999999999999886 42
Q ss_pred CCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHh--cCCCChHHHHHHhhHHHHHHHH-HHHH-hcCchhHHHHhhhhC
Q 019984 146 PYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFK--GYDMEIHNQIFYTTLCSCVLSL-SGLI-LEGHLFLAIDFVYHH 221 (333)
Q Consensus 146 ~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~g~~~~~~~~~~~~ 221 (333)
+++++|++.++.+.+..++++++++++++ +++.|+.+++.|+.+++...++ |... .+++.. . .+....
T Consensus 159 ------~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~-~~~~~~ 230 (316)
T KOG1441|consen 159 ------SFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-V-GFLTAP 230 (316)
T ss_pred ------cccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-e-eeeccc
Confidence 58999999999999999999999999984 5679999999999999999888 7643 444332 0 001001
Q ss_pred hH-hHHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhcc
Q 019984 222 LD-CFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKK 300 (333)
Q Consensus 222 ~~-~~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~ 300 (333)
+. ......+.+++++..|+..|.+++++||+|.++.+++|.++.++.|+++|++|+|+.|.+|+++.+.|+++|++.|.
T Consensus 231 ~~~~~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~ 310 (316)
T KOG1441|consen 231 WFVTFLILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKL 310 (316)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhh
Confidence 11 11222333688888899999999999999999999999999999999999999999999999999999999999988
Q ss_pred ccCCC
Q 019984 301 VSEKP 305 (333)
Q Consensus 301 ~~~~~ 305 (333)
++++.
T Consensus 311 ~~~~~ 315 (316)
T KOG1441|consen 311 KEKKG 315 (316)
T ss_pred hhhcc
Confidence 77754
No 9
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.91 E-value=6.9e-23 Score=190.99 Aligned_cols=245 Identities=15% Similarity=0.172 Sum_probs=177.7
Q ss_pred eeehHHHHHHHHHHHHHHHHHHHHHhcCC--C--CCCCchhhHHHHHHHHHhhhhhh-----HH----------------
Q 019984 52 FKYSLFLVFCNRLMTSAVSAGTLIASRKA--I--DPVAPVYKYCLVSMSNILTTTCQ-----YE---------------- 106 (333)
Q Consensus 52 f~~p~~l~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~y~~~s~~~~~a~~~~-----~~---------------- 106 (333)
++.|.+-++..-+.-.++-...+.+++.+ . ..+.++++|++.++.++.++++. |.
T Consensus 40 ~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~ 119 (334)
T PF06027_consen 40 VNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFV 119 (334)
T ss_pred ccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHH
Confidence 45677766655433332222222333321 1 23468899999999887766442 11
Q ss_pred -HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCC
Q 019984 107 -IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDME 185 (333)
Q Consensus 107 -ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~ 185 (333)
+++++++|+||++.|+++++++++|+++....|..+. +.+++.++.+.|+++++++++++|++++++|++.+++ +
T Consensus 120 ~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~--~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~--~ 195 (334)
T PF06027_consen 120 MILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSG--SDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKA--P 195 (334)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeeccccc--ccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccC--C
Confidence 8999999999999999999999999999888753211 1112346789999999999999999999999999854 6
Q ss_pred hHHHHHHhhHHHHHHHHHH-HHhcCchhHHHHhhhhChHhHHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHH
Q 019984 186 IHNQIFYTTLCSCVLSLSG-LILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLV 264 (333)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~ 264 (333)
..+.+....++++++..+. .+++.+-.+..++ +++.+..++.++++..+.+.+.-..++..||+..++...+..+.
T Consensus 196 ~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w---~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ 272 (334)
T PF06027_consen 196 RVEFLGMLGLFGFIISGIQLAILERSGIESIHW---TSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFY 272 (334)
T ss_pred HHHHHHHHHHHHHHHHHHHHHheehhhhhccCC---ChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHH
Confidence 7888999999999888775 3455432222222 33444333434444434444555578999999999999999999
Q ss_pred HHHhHhhhccCCCcccccchhhhhhhhhhhhhhhccccC
Q 019984 265 SIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSE 303 (333)
Q Consensus 265 sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~~~~ 303 (333)
++++++++||+++++..++|.++|+.|+++|+..+.+.+
T Consensus 273 ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~ 311 (334)
T PF06027_consen 273 ALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEE 311 (334)
T ss_pred HHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCccc
Confidence 999999999999999999999999999999987765443
No 10
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.87 E-value=1.1e-19 Score=172.51 Aligned_cols=276 Identities=17% Similarity=0.214 Sum_probs=177.2
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhhhccccccCCCCCCceeehHHHHHHHHHHHHHHHHHHHHHhcC-CCCCCCch---hh
Q 019984 14 SRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRK-AIDPVAPV---YK 89 (333)
Q Consensus 14 ~~~~~~~~~~~gi~~~~~~~~~~qe~i~~~~~~~~~~~f~~p~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~ 89 (333)
.+..+.-.....+-.+|..+.++-+..++.-. .|..+.+.|+.++.++..+....+++ ++.++.++ ..
T Consensus 9 ~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~--------~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~ 80 (358)
T PLN00411 9 RREAVFLTAMLATETSVVGISTLFKVATSKGL--------NIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSK 80 (358)
T ss_pred hhccchHHHHHHHHHHHHHHHHHHHHHHHCCC--------CccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHH
Confidence 34455555555666677777777777764321 34457799998887776655444332 22232233 33
Q ss_pred HHHHHHHHHhh------------------hhhhHH----HHHHHH------hCcccCchhHHHHHHHHHhhHHhhccCCC
Q 019984 90 YCLVSMSNILT------------------TTCQYE----IWGTLI------MQKRYKGYDYFLALLVTLGCSIFILFPSG 141 (333)
Q Consensus 90 y~~~s~~~~~a------------------~~~~~~----ll~~l~------~~~k~s~~~~l~vlli~~Gv~l~~~~~~~ 141 (333)
+...++..... ....+| ++++++ +|||.++++++++++.++|+.+....++.
T Consensus 81 l~l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~ 160 (358)
T PLN00411 81 IGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGP 160 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCc
Confidence 44444432110 011123 777777 59999999999999999999987653211
Q ss_pred CC-------------CC-CCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHH-HHHHH
Q 019984 142 AD-------------LS-PYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLS-LSGLI 206 (333)
Q Consensus 142 ~~-------------~~-~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 206 (333)
.. .. ....+..+...|+++++.+++++|++.+.+++..++++ +.....++...++.+.. .+.+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~-~~~~~t~~~~~~~~~~~~~~~l~ 239 (358)
T PLN00411 161 RVFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYP-AAFTVSFLYTVCVSIVTSMIGLV 239 (358)
T ss_pred ccccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-cHhHHHHHHHHHHHHHHHHHHHH
Confidence 00 00 00001122366999999999999999999999888763 23344445444444333 33344
Q ss_pred hcCchhHHHHhhhhChHhHHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhh
Q 019984 207 LEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSI 286 (333)
Q Consensus 207 ~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~ 286 (333)
.+++....+ ....+... ..+++.++.+.+++.++++++++.||.++++..++.|++++++|++++||++++.+++|.+
T Consensus 240 ~~~~~~~~~-~~~~~~~~-~~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~ 317 (358)
T PLN00411 240 VEKNNPSVW-IIHFDITL-ITIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGI 317 (358)
T ss_pred HccCCcccc-eeccchHH-HHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHH
Confidence 443211110 00012222 2355555556677788999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhcc
Q 019984 287 IVFGALYTRSFFKK 300 (333)
Q Consensus 287 lvl~Gv~~~~~~k~ 300 (333)
+++.|+++..+.|+
T Consensus 318 LIl~Gv~l~~~~~~ 331 (358)
T PLN00411 318 LITLGFYAVMWGKA 331 (358)
T ss_pred HHHHHHHHHHhhhh
Confidence 99999988776443
No 11
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.83 E-value=4.1e-19 Score=158.89 Aligned_cols=257 Identities=13% Similarity=0.142 Sum_probs=189.3
Q ss_pred HHHHHHHHHHHhhhhccccccCCCCCCceeehHHHHHHHHHHHHHHHHHHHHHhcCC---CCCCCchhhHH----HHHHH
Q 019984 24 SGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKA---IDPVAPVYKYC----LVSMS 96 (333)
Q Consensus 24 ~gi~~~~~~~~~~qe~i~~~~~~~~~~~f~~p~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~y~----~~s~~ 96 (333)
.++|.+-+.-..+|++.. .+|+||.+++.+|.++-.+++...++..+.+ .+.+..|+.|+ ++++.
T Consensus 22 l~yY~~Si~Ltf~~~~~~--------~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtala 93 (349)
T KOG1443|consen 22 LLYYFLSIGLTFYFKWLT--------KNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALA 93 (349)
T ss_pred HHHHHHHHHHHHHhhhhh--------cCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhh
Confidence 455554444444444443 3589999999999999999988776654422 23345677665 66554
Q ss_pred H---Hhhhhhh--------H----------H-HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcch
Q 019984 97 N---ILTTTCQ--------Y----------E-IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENT 154 (333)
Q Consensus 97 ~---~~a~~~~--------~----------~-ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~ 154 (333)
. ++.++.+ | . +++.++.-||++|.-.+.++++.+|++++++.+ ++++
T Consensus 94 ta~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~Ks-----------Tqf~ 162 (349)
T KOG1443|consen 94 TALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKS-----------TQFN 162 (349)
T ss_pred hhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecc-----------ccee
Confidence 2 2222111 1 1 556655559999999999999999999999872 2578
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHhcCC---CChHHHHHHhhHHHHHHHHHH-HHhcCchhH----HHHhhhhChHhHH
Q 019984 155 VWGVSLMVGYLGFDGFTSTFQDKLFKGYD---MEIHNQIFYTTLCSCVLSLSG-LILEGHLFL----AIDFVYHHLDCFF 226 (333)
Q Consensus 155 ~~G~~l~l~s~~~~a~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~----~~~~~~~~~~~~~ 226 (333)
+.|+.++..+.++.|+++.+.+.++++.+ .+|..++++..++..+.++|. +.+||.... .+++. .+...++
T Consensus 163 i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~-d~~~~~r 241 (349)
T KOG1443|consen 163 IEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQ-DTGLILR 241 (349)
T ss_pred ehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhc-CccHHHH
Confidence 99999999999999999999999988764 578999999999988877775 678875321 22221 1223444
Q ss_pred HHHHHHHHHHHHH---HHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhcc
Q 019984 227 DVALLSTVATTSQ---FFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKK 300 (333)
Q Consensus 227 ~il~l~~~~~l~~---~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~ 300 (333)
.+..++.++.+.. .+-|..+.+++.+|.++.+..|.+.++++++.+.++.++..+|.|..+++.|+.++...++
T Consensus 242 v~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~~~~ 318 (349)
T KOG1443|consen 242 VIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRNEPQ 318 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhccCcc
Confidence 4444455554443 4556678999999999999999999999999999999999999999999999999855433
No 12
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.82 E-value=8.2e-18 Score=156.06 Aligned_cols=259 Identities=12% Similarity=0.079 Sum_probs=177.9
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhhccccccCCCCCCceeehHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhhHHHHH
Q 019984 15 RVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVS 94 (333)
Q Consensus 15 ~~~~~~~~~~gi~~~~~~~~~~qe~i~~~~~~~~~~~f~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~s 94 (333)
|.+.+..+.......+.+..+.-+.... . -.|..+++.|++++.++..+....+|++.+++.+++.+...+
T Consensus 5 ~~~~~~~~~~~~~~iWg~~~~~~K~~~~-~--------~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~g 75 (292)
T PRK11272 5 QLLPLFGALFALYIIWGSTYLVIRIGVE-S--------WPPLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALIG 75 (292)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhc-c--------CCHHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHH
Confidence 4455666666666666666666554442 1 267899999999988776665444443322333344443333
Q ss_pred HHHHh--------h----------h--hhhHH----HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCC
Q 019984 95 MSNIL--------T----------T--TCQYE----IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKG 150 (333)
Q Consensus 95 ~~~~~--------a----------~--~~~~~----ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~ 150 (333)
..+.. + . ....| +++++ +|||+++++++++++.++|+.+...++ +.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~---~~------ 145 (292)
T PRK11272 76 LLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGG---NL------ 145 (292)
T ss_pred HHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCc---cc------
Confidence 32210 0 0 01122 66664 699999999999999999998876431 11
Q ss_pred CcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHH
Q 019984 151 RENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVAL 230 (333)
Q Consensus 151 ~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~ 230 (333)
+.+..|+++.+++.+++|.+.+..||..++ ++.....+...++.+...+.....++... ...++..|..+++
T Consensus 146 -~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~ 217 (292)
T PRK11272 146 -SGNPWGAILILIASASWAFGSVWSSRLPLP---VGMMAGAAEMLAAGVVLLIASLLSGERLT----ALPTLSGFLALGY 217 (292)
T ss_pred -ccchHHHHHHHHHHHHHHHHHHHHHhcCCC---cchHHHHHHHHHHHHHHHHHHHHcCCccc----ccCCHHHHHHHHH
Confidence 234579999999999999999999886432 23344456666666655555433332111 0123456767777
Q ss_pred HHHH-HHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhcc
Q 019984 231 LSTV-ATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKK 300 (333)
Q Consensus 231 l~~~-~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~ 300 (333)
+++. +.+++.++++++++.++.+.++...++|+++.+++++++||++++.+++|.++++.|+++.+..++
T Consensus 218 l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~ 288 (292)
T PRK11272 218 LAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 7654 557778899999999999999999999999999999999999999999999999999888766544
No 13
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.82 E-value=1.7e-17 Score=154.48 Aligned_cols=186 Identities=14% Similarity=0.220 Sum_probs=136.9
Q ss_pred HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCC-CC
Q 019984 107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYD-ME 185 (333)
Q Consensus 107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~-~~ 185 (333)
+++++++|||+++++++++++.++|+.++..++. + +.+.+..|+++++.+.++++.+.+++||..++++ .+
T Consensus 102 ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~--~------~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~ 173 (299)
T PRK11453 102 VLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSL--N------GQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPA 173 (299)
T ss_pred HHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccC--C------CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccc
Confidence 7899999999999999999999999998874421 1 1133567999999999999999999999765432 22
Q ss_pred hHHHHHHhhHHHHHHHHHH-HHhcCchhHHHHhhhhChHhHHHHHHHHH-HHHHHHHHHHHHHHhhChhHHHHHHHHHHH
Q 019984 186 IHNQIFYTTLCSCVLSLSG-LILEGHLFLAIDFVYHHLDCFFDVALLST-VATTSQFFISYTIRTFGALTFATIMTTRQL 263 (333)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~il~l~~-~~~l~~~~~~~~i~~~~alt~sv~~~l~~v 263 (333)
.....++....+.+..... ...+++.....++...++..|..++++++ ++.+++.++++.+++.++.+.+++..++|+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv 253 (299)
T PRK11453 174 VMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPV 253 (299)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 2233344443333222222 22333221111111235567778888855 445677788889999999999999999999
Q ss_pred HHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhcc
Q 019984 264 VSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKK 300 (333)
Q Consensus 264 ~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~ 300 (333)
+++++|++++||++++.+++|.++++.|+++..+.++
T Consensus 254 ~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~ 290 (299)
T PRK11453 254 VGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR 290 (299)
T ss_pred HHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence 9999999999999999999999999999988776655
No 14
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.82 E-value=4.6e-18 Score=157.94 Aligned_cols=184 Identities=13% Similarity=0.028 Sum_probs=134.4
Q ss_pred HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCh
Q 019984 107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEI 186 (333)
Q Consensus 107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~ 186 (333)
+++++++|||+++++++++++.++|++++..++.+.+......+..+...|+++++.+.+++|.++++.||..+++ ++
T Consensus 107 ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~--~~ 184 (295)
T PRK11689 107 LFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK--NG 184 (295)
T ss_pred HHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCC--Cc
Confidence 7889999999999999999999999998875421000000000012345799999999999999999999976543 44
Q ss_pred HHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHH
Q 019984 187 HNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSI 266 (333)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~si 266 (333)
....+ ..+.+.+.+....+++.. ...+++.|..+++.++.+.+++.++++++++.+|.+.++..+++|++++
T Consensus 185 ~~~~~---~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~ 256 (295)
T PRK11689 185 ITLFF---ILTALALWIKYFLSPQPA-----MVFSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSA 256 (295)
T ss_pred hhHHH---HHHHHHHHHHHHHhcCcc-----ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHH
Confidence 44322 222222222222333211 1124556767666677777889999999999999999999999999999
Q ss_pred HhHhhhccCCCcccccchhhhhhhhhhhhhhhcc
Q 019984 267 VLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKK 300 (333)
Q Consensus 267 lls~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~ 300 (333)
+++++++||++++.+++|.++++.|+++.....+
T Consensus 257 i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~~ 290 (295)
T PRK11689 257 ALAALLLSTPLSFSFWQGVAMVTAGSLLCWLATR 290 (295)
T ss_pred HHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhHh
Confidence 9999999999999999999999999877765443
No 15
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.79 E-value=4.4e-17 Score=148.17 Aligned_cols=170 Identities=15% Similarity=0.114 Sum_probs=137.1
Q ss_pred HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCh
Q 019984 107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEI 186 (333)
Q Consensus 107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~ 186 (333)
+++++++|||++++++.++++.++|+.+...++ + .+.+..|+.+.+.+.++++.+.++.|+..++++.++
T Consensus 89 ~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~---~-------~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~ 158 (260)
T TIGR00950 89 LLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDG---N-------LSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPEL 158 (260)
T ss_pred HHHHHHccCCCcHHHHHHHHHHHHhHHhhccCC---c-------ccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchH
Confidence 788999999999999999999999999876442 1 134578999999999999999999999887665545
Q ss_pred HHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHH-HHHHHHHHHHHHHhhChhHHHHHHHHHHHHH
Q 019984 187 HNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTV-ATTSQFFISYTIRTFGALTFATIMTTRQLVS 265 (333)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~-~~l~~~~~~~~i~~~~alt~sv~~~l~~v~s 265 (333)
.....+...++.++..+.....++... .++..|..+++.++. +.+++.++++++++.++.+.++...++|+++
T Consensus 159 ~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~ 232 (260)
T TIGR00950 159 LQFTGWVLLLGALLLLPFAWFLGPNPQ------ALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVA 232 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCC------cchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 555556677777777776554443111 134455566666554 4678889999999999999999999999999
Q ss_pred HHhHhhhccCCCcccccchhhhhhhhh
Q 019984 266 IVLSCVWFRHPLSWEQCIGSIIVFGAL 292 (333)
Q Consensus 266 ills~~~fge~~t~~~~iG~~lvl~Gv 292 (333)
.+++++++||++++.+++|.++++.|+
T Consensus 233 ~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 233 LLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 999999999999999999999999886
No 16
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.77 E-value=3.5e-17 Score=148.27 Aligned_cols=255 Identities=15% Similarity=0.138 Sum_probs=189.4
Q ss_pred HhhhhccccccCCCCCCceeehHHHHHHHHHHHHHHHHHHHHHhc-CCCC--CCCchhhHHHHHHHHHhhhhh-----h-
Q 019984 34 GILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASR-KAID--PVAPVYKYCLVSMSNILTTTC-----Q- 104 (333)
Q Consensus 34 ~~~qe~i~~~~~~~~~~~f~~p~~l~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~y~~~s~~~~~a~~~-----~- 104 (333)
-+.+|.+.+. .+||-..++...|.+++++.-.+.- ..| .+.+ ++...|+++|+++..+..... +
T Consensus 28 ~vvNK~vls~------y~f~~~l~l~~~Q~l~s~~~v~~lk-~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~~~slk~ 100 (314)
T KOG1444|consen 28 TVVNKIVLSS------YNFPMGLLLMLLQSLASVLVVLVLK-RLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTGSKSLKY 100 (314)
T ss_pred HHHHHHHHhc------CCCcHHHHHHHHHHHHHHHHHHHHH-HhceeecCCcChHHHHHHccHHHHHHHHHHHccccccc
Confidence 3446666531 2344445555599998876654422 222 1111 234457788888765543321 1
Q ss_pred -----HH-----------HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhh
Q 019984 105 -----YE-----------IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFD 168 (333)
Q Consensus 105 -----~~-----------ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~ 168 (333)
|+ +.+.+++|+|+++..|.++..+.+|......+ |. .++..|+.++..++++.
T Consensus 101 lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~----d~-------sf~~~gY~w~~~n~~~~ 169 (314)
T KOG1444|consen 101 LNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFT----DL-------SFNLRGYSWALANCLTT 169 (314)
T ss_pred cCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccc----cc-------eecchhHHHHHHHHHHH
Confidence 11 77889999999999999999999998877655 32 46677999999999999
Q ss_pred hhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhh---hChHhHHHHHHHHHHHHHHHHHHHHH
Q 019984 169 GFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVY---HHLDCFFDVALLSTVATTSQFFISYT 245 (333)
Q Consensus 169 a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~il~l~~~~~l~~~~~~~~ 245 (333)
+...++.|+..+..+.+.+++++|.|+++.+.+....+++||+. +..+.. ..+..+..+...++++..-.++.+++
T Consensus 170 a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~-~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~c 248 (314)
T KOG1444|consen 170 AAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELD-ALSLNFDNWSDSSVLVVMLLSCVMGFGISYTSFLC 248 (314)
T ss_pred HHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchH-HHHhhcccccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888777788899999999999988877777888865 333321 23455666666688888888999999
Q ss_pred HHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhccccCCCCC
Q 019984 246 IRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPRP 307 (333)
Q Consensus 246 i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~~~~~~~~ 307 (333)
.+..||+|.++++...+..+.+..++.+++++++.+.+|..+-+.|=.+|++.+.|||+.+|
T Consensus 249 t~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~~~ 310 (314)
T KOG1444|consen 249 TRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQPP 310 (314)
T ss_pred HhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccCCC
Confidence 99999999999996677777777777777899999999999998877788888877766655
No 17
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.77 E-value=3.8e-16 Score=144.94 Aligned_cols=254 Identities=10% Similarity=0.014 Sum_probs=164.7
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhccccccCCCCCCceeehHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhhHHHHHHH
Q 019984 17 LKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMS 96 (333)
Q Consensus 17 ~~~~~~~~gi~~~~~~~~~~qe~i~~~~~~~~~~~f~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~s~~ 96 (333)
.+-..+...-..++...+...|..... + .|..+.+.|++++.++..+....++++. ++..++.....++.
T Consensus 11 ~~~~~~~~la~~~~~~~~~~~K~~~~~--------~-~~~~~~~~R~~~a~l~l~~~~~~~~~~~-~~~~~~~~~~~g~~ 80 (293)
T PRK10532 11 WLPILLLLIAMASIQSGASLAKSLFPL--------V-GAPGVTALRLALGTLILIAIFKPWRLRF-AKEQRLPLLFYGVS 80 (293)
T ss_pred chHHHHHHHHHHHHHhhHHHHHHHHHH--------c-CHHHHHHHHHHHHHHHHHHHHhHHhccC-CHHHHHHHHHHHHH
Confidence 444555555566677777766666521 1 4567999999998877655432222211 22222222222221
Q ss_pred HHhhh------------------hhhHHHHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHH
Q 019984 97 NILTT------------------TCQYEIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGV 158 (333)
Q Consensus 97 ~~~a~------------------~~~~~ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~ 158 (333)
..... ...+|++..++-+||.++. ..+.+.++|+.+....+. +. +..+..|+
T Consensus 81 ~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~~~~~~~--~~~~i~~~Gv~li~~~~~--~~------~~~~~~G~ 150 (293)
T PRK10532 81 LGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSSRRPVDF--VWVVLAVLGLWFLLPLGQ--DV------SHVDLTGA 150 (293)
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcCChHHH--HHHHHHHHHHheeeecCC--Cc------ccCChHHH
Confidence 11111 1223466666666766544 455677899887653311 11 12356899
Q ss_pred HHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHH-HHH
Q 019984 159 SLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTV-ATT 237 (333)
Q Consensus 159 ~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~-~~l 237 (333)
++.+.+.+++|.+.+..||..+++ ++... .+...++.+...|....++... ..++..|...+++++. +.+
T Consensus 151 ll~l~aa~~~a~~~v~~r~~~~~~--~~~~~-~~~~~~~~~~l~~~~~~~~~~~------~~~~~~~~~~l~lgv~~t~~ 221 (293)
T PRK10532 151 ALALGAGACWAIYILSGQRAGAEH--GPATV-AIGSLIAALIFVPIGALQAGEA------LWHWSILPLGLAVAILSTAL 221 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccC--CchHH-HHHHHHHHHHHHHHHHHccCcc------cCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999886644 44444 3455666665555544332210 0233445455566555 445
Q ss_pred HHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhc
Q 019984 238 SQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFK 299 (333)
Q Consensus 238 ~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k 299 (333)
++.++++++++.+|.+++++..++|++++++|++++||++++.+++|.+++++|+..+.+..
T Consensus 222 ~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~ 283 (293)
T PRK10532 222 PYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI 283 (293)
T ss_pred HHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence 66788999999999999999999999999999999999999999999999999988877554
No 18
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.75 E-value=4.9e-16 Score=144.47 Aligned_cols=253 Identities=8% Similarity=0.011 Sum_probs=155.1
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhhhccccccCCCCCCceeehHHHHHHHHHHHHHHHHHHHHHhcCCCC--C-CCchhh-
Q 019984 14 SRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAID--P-VAPVYK- 89 (333)
Q Consensus 14 ~~~~~~~~~~~gi~~~~~~~~~~qe~i~~~~~~~~~~~f~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~- 89 (333)
++..+-.++......+|...++..+.+. + . .|.-+.+.|++++.++.......++++.+ + ..+.+.
T Consensus 4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~~--~-------~-~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~ 73 (296)
T PRK15430 4 KQTRQGVLLALAAYFIWGIAPAYFKLIY--Y-------V-PADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKI 73 (296)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHhc--C-------C-CHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHH
Confidence 3445555666666666766776665432 1 1 37789999999987755444433322100 0 001111
Q ss_pred -HHHHHHH-------------------HHhhhhhhHH----HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCC
Q 019984 90 -YCLVSMS-------------------NILTTTCQYE----IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLS 145 (333)
Q Consensus 90 -y~~~s~~-------------------~~~a~~~~~~----ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~ 145 (333)
....+.. +.....+.+| +++++++|||.++++++++++..+|+++....+ .
T Consensus 74 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~---~-- 148 (296)
T PRK15430 74 FMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTF---G-- 148 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHc---C--
Confidence 1111111 1111112233 788999999999999999999999999876431 1
Q ss_pred CCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhH
Q 019984 146 PYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCF 225 (333)
Q Consensus 146 ~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 225 (333)
+.. .+.+.+.+++|++.+.+|+..++...+......+..+++.+...+. ..... ......+..+
T Consensus 149 ------~~~----~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~ 212 (296)
T PRK15430 149 ------SLP----IIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI--ADSST----SHMGQNPMSL 212 (296)
T ss_pred ------Ccc----HHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH--ccCCc----ccccCCcHHH
Confidence 111 3466678899999999887643211122222233333332221111 11111 0001123222
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhh
Q 019984 226 FD-VALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF 297 (333)
Q Consensus 226 ~~-il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~ 297 (333)
.. +++.++.+.+++.++++++++.+|.+++++..++|++++++|++++||++++.+++|+++++.|+.+...
T Consensus 213 ~~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~ 285 (296)
T PRK15430 213 NLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVM 285 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 23 3333667778999999999999999999999999999999999999999999999999999877655544
No 19
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.69 E-value=5.3e-16 Score=129.84 Aligned_cols=141 Identities=18% Similarity=0.264 Sum_probs=117.4
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHhc-----CCCChHHHHHHhhHHHHHHHHHHHHhcCchh--HHHHhhhh-----ChHh
Q 019984 157 GVSLMVGYLGFDGFTSTFQDKLFKG-----YDMEIHNQIFYTTLCSCVLSLSGLILEGHLF--LAIDFVYH-----HLDC 224 (333)
Q Consensus 157 G~~l~l~s~~~~a~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~-----~~~~ 224 (333)
|+++++.|.++.|++++++|+.+++ .+.++.++++|+++.++++++|..+..++.. +....... .+..
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 7889999999999999999999988 5789999999999999999888754433321 11111111 2344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhh
Q 019984 225 FFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF 297 (333)
Q Consensus 225 ~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~ 297 (333)
+..++..++.+.+.+++.+.+++++||+++++.+.+|+++.+++|+++|||++|+.+++|+++++.|..+|+|
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 5555556888888899999999999999999999999999999999999999999999999999999998875
No 20
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.64 E-value=3.3e-16 Score=138.21 Aligned_cols=252 Identities=15% Similarity=0.155 Sum_probs=179.7
Q ss_pred CceeehHHHHHHHHHHHHHHHHHHHHHhcCC----CCCCCc--h---hhHHHHHHH--------HHhhhhhh---H----
Q 019984 50 EYFKYSLFLVFCNRLMTSAVSAGTLIASRKA----IDPVAP--V---YKYCLVSMS--------NILTTTCQ---Y---- 105 (333)
Q Consensus 50 ~~f~~p~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~--~---~~y~~~s~~--------~~~a~~~~---~---- 105 (333)
-...-|.|.+++||++...++.......++. .-|..+ + +...+.++. |.+..+.. |
T Consensus 56 ~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgR 135 (347)
T KOG1442|consen 56 VILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGR 135 (347)
T ss_pred hhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccceehhhcceEEEEecc
Confidence 4566899999999999988887655433321 111111 1 222233322 22222111 1
Q ss_pred ----H---HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHH
Q 019984 106 ----E---IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKL 178 (333)
Q Consensus 106 ----~---ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l 178 (333)
+ ++.++++|+|-+..-..++++++.|-.+ +- |.+. ..+..++.|.++.+.|.++-|+..++.+|.
T Consensus 136 sLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~l---Gv---dqE~--~~~~ls~~GvifGVlaSl~vAlnaiytkk~ 207 (347)
T KOG1442|consen 136 SLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGL---GV---DQEG--STGTLSWIGVIFGVLASLAVALNAIYTKKV 207 (347)
T ss_pred chhhhHHHHhHHhhcccccccccceeehhheehhee---cc---cccc--ccCccchhhhHHHHHHHHHHHHHHHhhhee
Confidence 1 8899999999999999999999988443 31 1111 123678899999999999999999999877
Q ss_pred HhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhh-ChHhHHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHH
Q 019984 179 FKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYH-HLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATI 257 (333)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~ 257 (333)
....+-..+.+.+|+|+.+.++.+|.+++.|++.+-+.|... ....|..+.+-+++++.-++.-.+-||.+||+|+.+.
T Consensus 208 l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK~TSplThnIS 287 (347)
T KOG1442|consen 208 LPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVTGWQIKVTSPLTHNIS 287 (347)
T ss_pred cccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhheeeEEEEecccceeeec
Confidence 665555678899999999999999999999987654443211 2233433333366665444455555899999999999
Q ss_pred HHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhccccCCCCCCC
Q 019984 258 MTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPRPSE 309 (333)
Q Consensus 258 ~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~~~~~~~~~~ 309 (333)
++.|.+...++++.+++|..+..-|-|-.+++.|-..|.+.|..+.++.+++
T Consensus 288 gTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~~~ 339 (347)
T KOG1442|consen 288 GTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKASAQ 339 (347)
T ss_pred HhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhccC
Confidence 9999999999999999999999999999999999888998877655444433
No 21
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.63 E-value=3.8e-13 Score=123.86 Aligned_cols=191 Identities=13% Similarity=0.249 Sum_probs=145.0
Q ss_pred HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCC-CCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCC
Q 019984 107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPY-SKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDME 185 (333)
Q Consensus 107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~-~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~ 185 (333)
++..+++|||.+++||.++++.+.|+++......+ +..+. ...+.+...|+..++.+++.+|+.+++.||++|+.+.+
T Consensus 134 ~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~-~~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s 212 (345)
T KOG2234|consen 134 IFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLS-PTGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVS 212 (345)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCC-CCCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCch
Confidence 88999999999999999999999999999843211 11111 12246788999999999999999999999999987777
Q ss_pred hHHHHHHhhHHHHHHHHHHHHhcC-chhHHHHhhhhCh-HhHHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHH
Q 019984 186 IHNQIFYTTLCSCVLSLSGLILEG-HLFLAIDFVYHHL-DCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQL 263 (333)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~-~~~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v 263 (333)
.+-....+..+|.++.+...+.++ +-.....++..+. ..|.. .+...+|.+++...+|+.+...-+-...+.-+
T Consensus 213 ~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw~v----Vl~~a~gGLlvs~v~KyADnIlK~f~~s~aii 288 (345)
T KOG2234|consen 213 LWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVWLV----VLLNAVGGLLVSLVMKYADNILKGFSTSVAII 288 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHHHHH----HHHHhccchhHHHHHHHhHHHHHHHHHHHHHH
Confidence 777777777888887776554432 2111122333332 23322 33344455677778888899988888999999
Q ss_pred HHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhcccc
Q 019984 264 VSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVS 302 (333)
Q Consensus 264 ~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~~~ 302 (333)
++.+.|+.+|+.++|....+|..+|+..+.+|...+++.
T Consensus 289 lt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~~ 327 (345)
T KOG2234|consen 289 LTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPARD 327 (345)
T ss_pred HHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCccc
Confidence 999999999999999999999999999999999666654
No 22
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.63 E-value=2.3e-15 Score=129.26 Aligned_cols=261 Identities=12% Similarity=0.097 Sum_probs=179.6
Q ss_pred hhhhccccccCCCCCCceeehHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhhHHHHHH-----HHHhhhhhhHH---
Q 019984 35 ILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSM-----SNILTTTCQYE--- 106 (333)
Q Consensus 35 ~~qe~i~~~~~~~~~~~f~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~s~-----~~~~a~~~~~~--- 106 (333)
+.+|.+.. ..+|+--..+.++|.+++.+-..+....+-.+.| ..+.+.|+++|+ .+.++..++|-
T Consensus 23 ltNKyVls------~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR-~t~aK~WfpiSfLLv~MIyt~SKsLqyL~vp 95 (309)
T COG5070 23 LTNKYVLS------NLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFR-LTKAKKWFPISFLLVVMIYTSSKSLQYLAVP 95 (309)
T ss_pred HhhHheec------CCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhee-hhhhhhhcCHHHHHHHHHHhcccceeeeeee
Confidence 44555552 3457777889999999887654443222111111 223344555444 34444444432
Q ss_pred --------------HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhhH
Q 019984 107 --------------IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTS 172 (333)
Q Consensus 107 --------------ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~ 172 (333)
....+++|+|.+..+..+.+++++.-+....+|. +........-.-|++++..++...+.+-
T Consensus 96 iYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~----q~~~~~~~~lN~GY~Wm~~NclssaafV 171 (309)
T COG5070 96 IYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQ----QASAFKAQILNPGYLWMFTNCLSSAAFV 171 (309)
T ss_pred HHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchh----hHHHHHhcccCCceEEEehhhHhHHHHH
Confidence 5678999999999999999999998887777742 1100001223459999999999988888
Q ss_pred HHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhh-hChHhHHHHHHHHHHHHHHHHHHHHHHHhhCh
Q 019984 173 TFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVY-HHLDCFFDVALLSTVATTSQFFISYTIRTFGA 251 (333)
Q Consensus 173 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~il~l~~~~~l~~~~~~~~i~~~~a 251 (333)
...|+..+-.+...++.|+|.|+.+.++++...+...+..+. +... -.++...+++..+++++.-.++.-++++.+++
T Consensus 172 L~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~-n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSS 250 (309)
T COG5070 172 LIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPG-NLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSS 250 (309)
T ss_pred HHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcc-hhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhh
Confidence 777765554445568899999999999887764433332221 1111 14455556666678876666888889999999
Q ss_pred hHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhccccCCCCC
Q 019984 252 LTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPRP 307 (333)
Q Consensus 252 lt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~~~~~~~~ 307 (333)
++.++++.+.|....+.|.++|++|.+...+..+.+-+..-.+|.+.|.+|+|.++
T Consensus 251 TtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q~q~ 306 (309)
T COG5070 251 TTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQNQK 306 (309)
T ss_pred hHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999988655577777776655544
No 23
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.60 E-value=4.6e-14 Score=130.20 Aligned_cols=170 Identities=13% Similarity=0.128 Sum_probs=119.5
Q ss_pred HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCh
Q 019984 107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEI 186 (333)
Q Consensus 107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~ 186 (333)
+++++++|||++++++++++++++|+.+....+ + + ..+..|+.+++.+.++++.+.+..|+..++ .++
T Consensus 105 l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~---~-~------~~~~~g~~~~l~aal~~a~~~i~~k~~~~~--~~~ 172 (281)
T TIGR03340 105 IWATLTLGETLSPLAWLGILIITLGLLVLGLSR---F-A------QHRRKAYAWALAAALGTAIYSLSDKAAALG--VPA 172 (281)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccc---c-c------ccchhHHHHHHHHHHHHHHhhhhccccccc--hhc
Confidence 789999999999999999999999999876542 1 1 123468778888999999999887765332 222
Q ss_pred H-HHHHHhhHHHHHHH-HHHHH---hcCchhHHHHhhhhChHhHHHHHHH-HHHHHHHHHHHHHHHHhhChhHHHHHHHH
Q 019984 187 H-NQIFYTTLCSCVLS-LSGLI---LEGHLFLAIDFVYHHLDCFFDVALL-STVATTSQFFISYTIRTFGALTFATIMTT 260 (333)
Q Consensus 187 ~-~~~~~~~~~~~~~~-~~~~~---~~g~~~~~~~~~~~~~~~~~~il~l-~~~~~l~~~~~~~~i~~~~alt~sv~~~l 260 (333)
. ....+. .++.+.. .|... ..++.. . ...+..+..+.+. ++++.+++.++++++++.++.+.+....+
T Consensus 173 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l 246 (281)
T TIGR03340 173 FYSALGYL-GIGFLAMGWPFLLLYLKRHGRS----M-FPYARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNT 246 (281)
T ss_pred ccccHHHH-HHHHHHHHHHHHHHHHHHhccc----h-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeeccc
Confidence 1 112221 1222221 22211 111110 0 0112223343444 56667788899999999999999999999
Q ss_pred HHHHHHHhHhhhccCCCcccccchhhhhhhhhhh
Q 019984 261 RQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYT 294 (333)
Q Consensus 261 ~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~ 294 (333)
.|++++++|++++||+++..+++|.++++.|+.+
T Consensus 247 ~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 247 SIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 9999999999999999999999999999999764
No 24
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.59 E-value=9.5e-14 Score=125.20 Aligned_cols=178 Identities=16% Similarity=0.291 Sum_probs=134.0
Q ss_pred HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCC------CCcchHHHHHHHHHHHHhhhhhHHHHHHHHh
Q 019984 107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSK------GRENTVWGVSLMVGYLGFDGFTSTFQDKLFK 180 (333)
Q Consensus 107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~------~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~ 180 (333)
+++++++|||.+++||+++++.++|+++...++...+..+..+ .......|+++++++++++|+.+++.||++|
T Consensus 59 l~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK 138 (244)
T PF04142_consen 59 LFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLK 138 (244)
T ss_pred HHHHHHHHcccchhhHHHHHHHHHHHheeecCCccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8899999999999999999999999999887643221000000 1234678999999999999999999999999
Q ss_pred cCCCChHHHHHHhhHHHHHHHHHHHHhc-CchhHHHHhhhh-ChHhHHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHHH
Q 019984 181 GYDMEIHNQIFYTTLCSCVLSLSGLILE-GHLFLAIDFVYH-HLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIM 258 (333)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~-~~~~~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~ 258 (333)
+.+.+.+........+|.++.++..... ++......+... ++..|. ..+..+++.+..-..+|+.+...-+..+
T Consensus 139 ~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~~~~----~i~~~a~gGllva~v~KyadnI~K~fa~ 214 (244)
T PF04142_consen 139 RSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWWVWI----VIFLQAIGGLLVAFVLKYADNIVKGFAT 214 (244)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchHHHH----HHHHHHHhhHHHHHHHHHHhHHHHHHHH
Confidence 9887878877888888888777654333 221111112111 222232 2344555667778899999999999999
Q ss_pred HHHHHHHHHhHhhhccCCCcccccchhhhh
Q 019984 259 TTRQLVSIVLSCVWFRHPLSWEQCIGSIIV 288 (333)
Q Consensus 259 ~l~~v~sills~~~fge~~t~~~~iG~~lv 288 (333)
.+.-+++.++|+++||.++|....+|..+|
T Consensus 215 a~siv~t~~~s~~lf~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 215 AVSIVLTAVLSVLLFGFPPSLSFLLGAALV 244 (244)
T ss_pred HHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence 999999999999999999999999998765
No 25
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.58 E-value=3e-12 Score=117.38 Aligned_cols=173 Identities=16% Similarity=0.167 Sum_probs=127.5
Q ss_pred HHHH-HHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcc-hHHHHHHHHHHHHhhhhhHHHHHHHHhcCCC
Q 019984 107 IWGT-LIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGREN-TVWGVSLMVGYLGFDGFTSTFQDKLFKGYDM 184 (333)
Q Consensus 107 ll~~-l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~-~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~ 184 (333)
++++ +++|||.++++++++++..+|+.+....+.. . .. ...|+.+.+.+.++++++.+.+|+.. + .
T Consensus 112 ~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~----~-----~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~--~ 179 (292)
T COG0697 112 LLAVLLLLGERLSLLQILGILLALAGVLLILLGGGG----G-----GILSLLGLLLALAAALLWALYTALVKRLS-R--L 179 (292)
T ss_pred HHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCc----c-----hhHHHHHHHHHHHHHHHHHHHHHHHHHhc-C--C
Confidence 6775 6669999999999999999999998766311 0 11 57899999999999999999999876 3 3
Q ss_pred ChHHHHH-HhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHH-HHHHHHHHHHHhhChhHHHHHHHHHH
Q 019984 185 EIHNQIF-YTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVAT-TSQFFISYTIRTFGALTFATIMTTRQ 262 (333)
Q Consensus 185 ~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~-l~~~~~~~~i~~~~alt~sv~~~l~~ 262 (333)
++..... +..........+......+ .......+..+.+.++.+. +++.++++++++.++...+....++|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (292)
T COG0697 180 GPVTLALLLQLLLALLLLLLFFLSGFG-------APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEP 252 (292)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhcccc-------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHH
Confidence 3444443 2222111111111111111 1123345555566666555 68999999999999999999999999
Q ss_pred HHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhh
Q 019984 263 LVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF 298 (333)
Q Consensus 263 v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~ 298 (333)
+.++++++++++|+++..+++|.++++.|+.+....
T Consensus 253 v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 253 VFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999998887655
No 26
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.58 E-value=1e-14 Score=130.03 Aligned_cols=177 Identities=19% Similarity=0.219 Sum_probs=115.4
Q ss_pred HhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHH
Q 019984 112 IMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIF 191 (333)
Q Consensus 112 ~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~ 191 (333)
.++++.+..||.++.....|+.+...++.. + ......+.+.|..+++.+++++++.++++|+.+|+++.+.+....
T Consensus 45 ~l~~~ls~~q~~al~~l~~~~~~~~~~~~~-~---~~~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~ 120 (222)
T TIGR00803 45 SLVASLGDDQWFSLKLLKLGVAIVQMVQSS-A---KTLMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNL 120 (222)
T ss_pred HHHhHhhHHHHHHHHHHHHhHeeeecCCCC-c---cccccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHH
Confidence 445555555555555555555444332110 0 001123568899999999999999999999987765443333344
Q ss_pred HhhHHHHHHHHHHHHhc-CchhHHHHhhhhChHhHHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHh
Q 019984 192 YTTLCSCVLSLSGLILE-GHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSC 270 (333)
Q Consensus 192 ~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~ 270 (333)
.+.+++.+......... ++......+...+|... ....+.+.+++.++.+++|+.|+++.++++++|++++.++|+
T Consensus 121 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~ 197 (222)
T TIGR00803 121 QLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAV---WIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASV 197 (222)
T ss_pred HHHHHHHHHHHHHHhhcccchhhccCcccCCchHH---HHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 44444433322222221 12211112222333322 233455677888999999999999999999999999999999
Q ss_pred hhccCCCcccccchhhhhhhhhhhh
Q 019984 271 VWFRHPLSWEQCIGSIIVFGALYTR 295 (333)
Q Consensus 271 ~~fge~~t~~~~iG~~lvl~Gv~~~ 295 (333)
++|||+++..+|+|..+++.|+++|
T Consensus 198 ~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 198 RLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred HHhcCCccHHHHHHHHHHHeeeEeC
Confidence 9999999999999999999998764
No 27
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.52 E-value=2e-15 Score=132.12 Aligned_cols=201 Identities=16% Similarity=0.180 Sum_probs=148.2
Q ss_pred CCchhhHHHHHHHHHhhhh-----hhH--------------H---HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCC
Q 019984 84 VAPVYKYCLVSMSNILTTT-----CQY--------------E---IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSG 141 (333)
Q Consensus 84 ~~~~~~y~~~s~~~~~a~~-----~~~--------------~---ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~ 141 (333)
+..|++|.+.++.++-+++ .+| | +++|+++|.||++.|+.++.++..||++...+|-+
T Consensus 75 ~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~ 154 (336)
T KOG2766|consen 75 KAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVH 154 (336)
T ss_pred HHHHHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeec
Confidence 3557788888877665542 222 1 78999999999999999999999999999887432
Q ss_pred CCCCCCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhC
Q 019984 142 ADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHH 221 (333)
Q Consensus 142 ~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 221 (333)
. ..++++++...|+.+++..+-++|..++.+|.+.| +.+..++|....++|+++..+..+.+..-...+++ +
T Consensus 155 a---gd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvk--n~d~~elm~~lgLfGaIIsaIQ~i~~~~~~~tl~w---~ 226 (336)
T KOG2766|consen 155 A---GDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVK--NADRVELMGFLGLFGAIISAIQFIFERHHVSTLHW---D 226 (336)
T ss_pred c---ccccCCCCCccCcEEEEecceeeeeccccHHHHHh--cCcHHHHHHHHHHHHHHHHHHHHhhhccceeeEee---h
Confidence 1 12234577889999999999999999999999988 56889999999999999988776555432222111 1
Q ss_pred hHhHHHHHHH--HHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhh
Q 019984 222 LDCFFDVALL--STVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF 297 (333)
Q Consensus 222 ~~~~~~il~l--~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~ 297 (333)
|....++ .++-++-.-+.--.+|..|++..++...+..+.++++ ..||-+++|...+..+.+..|+.+|+.
T Consensus 227 ---~~i~~yl~f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~ 299 (336)
T KOG2766|consen 227 ---SAIFLYLRFALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYST 299 (336)
T ss_pred ---HHHHHHHHHHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeec
Confidence 1111111 2221111112222578999999999999999999999 677877999999999999999888843
No 28
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.45 E-value=7.3e-12 Score=111.29 Aligned_cols=190 Identities=15% Similarity=0.098 Sum_probs=136.7
Q ss_pred HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCh
Q 019984 107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEI 186 (333)
Q Consensus 107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~ 186 (333)
+++..+++++.+.+||++++.+.+|+++....|-+.+..+.+ +-++.+.|+++++.+.+.-|++.++.||.+++++++|
T Consensus 128 lfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~-d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~p 206 (372)
T KOG3912|consen 128 LFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYT-DYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAP 206 (372)
T ss_pred HHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCcc-ccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCH
Confidence 888999999999999999999999999987763221111111 1245678999999999999999999999999999999
Q ss_pred HHHHHHhhHHHHHHHHHHH-----HhcCc---------h---hHHHHhhhhChHhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 019984 187 HNQIFYTTLCSCVLSLSGL-----ILEGH---------L---FLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTF 249 (333)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~-----~~~g~---------~---~~~~~~~~~~~~~~~~il~l~~~~~l~~~~~~~~i~~~ 249 (333)
.+...|..+++.+++.... +..|+ + .+.+......|.....+....+.-++.|+.-.+..|..
T Consensus 207 l~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~ 286 (372)
T KOG3912|consen 207 LQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKEL 286 (372)
T ss_pred HHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHh
Confidence 9999999999965433221 11221 1 11111112233222111111111111223333457899
Q ss_pred ChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhh
Q 019984 250 GALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF 297 (333)
Q Consensus 250 ~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~ 297 (333)
|++|-.+...+|..+..++++....|.+...|+.|.++-+.|+.+|.-
T Consensus 287 SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~~ 334 (372)
T KOG3912|consen 287 SATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYNQ 334 (372)
T ss_pred hHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999877764
No 29
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.42 E-value=8.3e-11 Score=109.05 Aligned_cols=175 Identities=10% Similarity=0.112 Sum_probs=124.7
Q ss_pred HHHHHHhCcccCchh----HHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcC
Q 019984 107 IWGTLIMQKRYKGYD----YFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGY 182 (333)
Q Consensus 107 ll~~l~~~~k~s~~~----~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~ 182 (333)
+++.+++|||.++++ +++++++++|+++....+++ +. +.++..+...|+.+.+++.++++.+...-|+.
T Consensus 102 l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~-~~--~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~---- 174 (290)
T TIGR00776 102 LFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDK-SA--GIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF---- 174 (290)
T ss_pred HHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecccc-cc--ccccccchhhHHHHHHHHHHHHHHHHHHHHHc----
Confidence 678899999999999 99999999999987665321 11 00000233679999999999999999988764
Q ss_pred CCChHHHHHHhhH----HHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHHHHHHHHHHHHH-hhChhHHHHH
Q 019984 183 DMEIHNQIFYTTL----CSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIR-TFGALTFATI 257 (333)
Q Consensus 183 ~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l~~~~~~~~i~-~~~alt~sv~ 257 (333)
+.+|.+..+.... .+.++..+. ....+ + .....+..++ .++...+++.+++...+ +.++.+.++.
T Consensus 175 ~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~------~--~~~~~~~~~~-~Gi~~~ia~~~y~~~~~~~~~~~~~~~l 244 (290)
T TIGR00776 175 GVDGLSVLLPQAIGMVIGGIIFNLGH-ILAKP------L--KKYAILLNIL-PGLMWGIGNFFYLFSAQPKVGVATSFSL 244 (290)
T ss_pred CCCcceehhHHHHHHHHHHHHHHHHH-hcccc------h--HHHHHHHHHH-HHHHHHHHHHHHHHHcccccchhhHHHH
Confidence 3466665333322 222222222 00011 1 1112333333 56666677778888888 9999999999
Q ss_pred HHHHHHHHHHhHhhhccCCCccccc----chhhhhhhhhhhhhhh
Q 019984 258 MTTRQLVSIVLSCVWFRHPLSWEQC----IGSIIVFGALYTRSFF 298 (333)
Q Consensus 258 ~~l~~v~sills~~~fge~~t~~~~----iG~~lvl~Gv~~~~~~ 298 (333)
..++|+.+.+.+++++||+.++.|+ +|.++++.|+.+....
T Consensus 245 s~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~ 289 (290)
T TIGR00776 245 SQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGIG 289 (290)
T ss_pred HHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999 9999999998776544
No 30
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.33 E-value=1.2e-09 Score=98.29 Aligned_cols=173 Identities=14% Similarity=0.154 Sum_probs=128.6
Q ss_pred HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCh
Q 019984 107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEI 186 (333)
Q Consensus 107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~ 186 (333)
+++.+++|||.++.|++++++..+||..-.... ++.++..+.+++ .+++|+..-|++ ++++
T Consensus 114 llG~lflkErls~~Q~iAV~lA~~GV~~~~~~~-----------g~lpwval~la~----sf~~Ygl~RK~~----~v~a 174 (293)
T COG2962 114 LLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL-----------GSLPWVALALAL----SFGLYGLLRKKL----KVDA 174 (293)
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc-----------CCCcHHHHHHHH----HHHHHHHHHHhc----CCch
Confidence 889999999999999999999999999888762 145666666654 557777655433 5666
Q ss_pred HHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhh-hChHhHHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHH
Q 019984 187 HNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVY-HHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVS 265 (333)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~s 265 (333)
.+-+..-.++-.+..+..++..++-.+ +.. .++..+..+...+..+.+.-.+.-.+-++.+=.+.++...++|..-
T Consensus 175 ~~g~~lE~l~l~p~al~yl~~l~~~~~---~~~~~~~~~~~LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~ 251 (293)
T COG2962 175 LTGLTLETLLLLPVALIYLLFLADSGQ---FLQQNANSLWLLLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLM 251 (293)
T ss_pred HHhHHHHHHHHhHHHHHHHHHHhcCch---hhhcCCchHHHHHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 665555555555555544333322111 222 3445555555557777777677777899999999999999999999
Q ss_pred HHhHhhhccCCCcccccchhhhhhhhhhhhhhhccc
Q 019984 266 IVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKV 301 (333)
Q Consensus 266 ills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~~ 301 (333)
.+++++++||+++..+++..+.+-.|+.++....-+
T Consensus 252 fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~ 287 (293)
T COG2962 252 FLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLY 287 (293)
T ss_pred HHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999888876443
No 31
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.30 E-value=1.1e-09 Score=99.61 Aligned_cols=219 Identities=7% Similarity=0.003 Sum_probs=131.6
Q ss_pred HHHHHHHHHHHHHHhhhhccccccCCCCCCceeehHHHHHHHHHHHHHHHHHHHHHhcCC------CC--CCCchh-hHH
Q 019984 21 FAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKA------ID--PVAPVY-KYC 91 (333)
Q Consensus 21 ~~~~gi~~~~~~~~~~qe~i~~~~~~~~~~~f~~p~~l~~~~~~~~~~~~~~~~~~~~~~------~~--~~~~~~-~y~ 91 (333)
++......+|...++..+.+. + -.|..+++.|+++++++..+....++++ .+ ++.+++ ...
T Consensus 5 ~~~i~a~~~wg~~~~~~k~~~--~--------~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (256)
T TIGR00688 5 IVSLLASFLFGYMYYYSKLLK--P--------LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLL 74 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHhc--c--------CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHH
Confidence 344444456666776666532 1 2678899999998876654443332211 01 111111 111
Q ss_pred HHHHH------------------HHhhhhhhHH----HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCC
Q 019984 92 LVSMS------------------NILTTTCQYE----IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSK 149 (333)
Q Consensus 92 ~~s~~------------------~~~a~~~~~~----ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~ 149 (333)
..++. +.....+.+| +++++++|||+++++++++++..+|+++...++ .
T Consensus 75 ~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~---~------ 145 (256)
T TIGR00688 75 LCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLK---G------ 145 (256)
T ss_pred HHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHc---C------
Confidence 11111 1111122234 788999999999999999999999999876431 0
Q ss_pred CCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhCh-HhHHHH
Q 019984 150 GRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHL-DCFFDV 228 (333)
Q Consensus 150 ~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~i 228 (333)
+.. .+.+.+.++++.+.+..|+..++ +..+...+ .....+...+.....+.... .. .++ ..|..+
T Consensus 146 --~~~----~~~l~aa~~~a~~~i~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~l 211 (256)
T TIGR00688 146 --SLP----WEALVLAFSFTAYGLIRKALKNT---DLAGFCLE-TLSLMPVAIYYLLQTDFATV--QQ--TNPFPIWLLL 211 (256)
T ss_pred --Cch----HHHHHHHHHHHHHHHHHhhcCCC---CcchHHHH-HHHHHHHHHHHHHHhccCcc--cc--cCchhHHHHH
Confidence 112 24567888999999999886432 22222211 22222222222112111100 00 122 356666
Q ss_pred HHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhh
Q 019984 229 ALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVW 272 (333)
Q Consensus 229 l~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~ 272 (333)
++.++++.+++.++.+++++.+|.+.++..+++|+++.++++++
T Consensus 212 ~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 212 VLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 67777788899999999999999999999999999999999864
No 32
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.27 E-value=3.1e-12 Score=112.98 Aligned_cols=189 Identities=15% Similarity=0.158 Sum_probs=137.9
Q ss_pred HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCC--CCCCCCCCCC-CcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCC
Q 019984 107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPS--GADLSPYSKG-RENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYD 183 (333)
Q Consensus 107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~--~~~~~~~~~~-~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~ 183 (333)
+++|+++||+++..+.++.++...||++..-.+- .++.+..++. -+.+..|....+.+.++.|-..++.+++-| +
T Consensus 139 ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk--~ 216 (346)
T KOG4510|consen 139 IFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGK--N 216 (346)
T ss_pred HHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchHHHHHhHhhhhhHHHHHHHhhc--c
Confidence 8999999999999999999999999998753210 0011111111 134567777777777777777777777755 3
Q ss_pred CChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHH
Q 019984 184 MEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQL 263 (333)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v 263 (333)
.|..-.+.|..+++++..++.+..-|+. +. .+....|+.+..+++.+.++|++.-..+++=-|-..++..++.-+
T Consensus 217 ~h~~msvsyf~~i~lV~s~I~~~~ig~~----~l-P~cgkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvv 291 (346)
T KOG4510|consen 217 AHAIMSVSYFSLITLVVSLIGCASIGAV----QL-PHCGKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVV 291 (346)
T ss_pred ccEEEEehHHHHHHHHHHHHHHhhccce----ec-CccccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHH
Confidence 4555566777788877777665444431 11 123345555566699999999999998887777778899999999
Q ss_pred HHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhcccc
Q 019984 264 VSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVS 302 (333)
Q Consensus 264 ~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~~~ 302 (333)
++.+.-+++|||.+|++.|.|+++++....+....|..+
T Consensus 292 fAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kwa~ 330 (346)
T KOG4510|consen 292 FAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKWAG 330 (346)
T ss_pred HHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHHhc
Confidence 999999999999999999999999998877766555444
No 33
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.16 E-value=2.9e-10 Score=105.11 Aligned_cols=189 Identities=11% Similarity=0.045 Sum_probs=141.6
Q ss_pred HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcC--CC
Q 019984 107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGY--DM 184 (333)
Q Consensus 107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~--~~ 184 (333)
.++.++..+|+++.|.+++.+.++||++.+.++++.+ .+..+.....|.++.+++++.+|.|.++.||-..++ ++
T Consensus 201 ~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~---~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rv 277 (416)
T KOG2765|consen 201 FLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQN---SDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERV 277 (416)
T ss_pred HHHHHcCcchhhHHHHHHHHHhhccEEEEEecccccc---ccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccc
Confidence 6677778999999999999999999999998854211 111235678999999999999999999998877766 47
Q ss_pred ChHHHHHHhhHHHHHHHHHHHHhcCch-hHHHHhhhhChHhHHHHHHH-HHHHHHHHHHHHHHHHhhChhHHHHHHHHHH
Q 019984 185 EIHNQIFYTTLCSCVLSLSGLILEGHL-FLAIDFVYHHLDCFFDVALL-STVATTSQFFISYTIRTFGALTFATIMTTRQ 262 (333)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~il~l-~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~ 262 (333)
|...+..+..++.++++.|.+++-... .+.++. ...++. ..++.. .+.+++.-+++..+.-.++|++.++..++.-
T Consensus 278 di~lffGfvGLfnllllwP~l~iL~~~~~e~F~l-P~~~q~-~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltI 355 (416)
T KOG2765|consen 278 DIQLFFGFVGLFNLLLLWPPLIILDFFGEERFEL-PSSTQF-SLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTI 355 (416)
T ss_pred cHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccC-CCCcee-EeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEee
Confidence 777777788888888888764322110 011111 011121 122333 3344455588888899999999999999999
Q ss_pred HHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhcc
Q 019984 263 LVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKK 300 (333)
Q Consensus 263 v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~ 300 (333)
-++++..+++=|+++|+.+++|.+.|++|.+..++..+
T Consensus 356 PLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~ 393 (416)
T KOG2765|consen 356 PLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE 393 (416)
T ss_pred eHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence 99999999999999999999999999999877776543
No 34
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.09 E-value=3.6e-08 Score=86.91 Aligned_cols=219 Identities=12% Similarity=0.090 Sum_probs=137.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhhHHHHHHH----HHhhhhhh-----------HH----HHHHHHhCc
Q 019984 55 SLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMS----NILTTTCQ-----------YE----IWGTLIMQK 115 (333)
Q Consensus 55 p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~s~~----~~~a~~~~-----------~~----ll~~l~~~~ 115 (333)
|+-.++.|..++.++.+..++-+|++..+ ..++....-+.+ |.. .+.. .+ +.-.++.-|
T Consensus 40 ~~g~t~lRl~~aaLIll~l~RPwr~r~~~-~~~~~~~~yGvsLg~MNl~-FY~si~riPlGiAVAiEF~GPL~vA~~~sR 117 (292)
T COG5006 40 AAGVTALRLAIAALILLALFRPWRRRLSK-PQRLALLAYGVSLGGMNLL-FYLSIERIPLGIAVAIEFTGPLAVALLSSR 117 (292)
T ss_pred hhhHHHHHHHHHHHHHHHHhhHHHhccCh-hhhHHHHHHHHHHHHHHHH-HHHHHHhccchhhhhhhhccHHHHHHHhcc
Confidence 45678889888877766554433332221 122222221222 221 1111 11 334445556
Q ss_pred ccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhH
Q 019984 116 RYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTL 195 (333)
Q Consensus 116 k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~ 195 (333)
|.. +.+.+.+.+.|+.+..-.+. . ..+.+..|..+.+.+..||+.|-+.-+|.-+ ..+...-+..-..
T Consensus 118 r~~--d~vwvaLAvlGi~lL~p~~~--~------~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~--~~~g~~g~a~gm~ 185 (292)
T COG5006 118 RLR--DFVWVALAVLGIWLLLPLGQ--S------VWSLDPVGVALALGAGACWALYIVLGQRAGR--AEHGTAGVAVGML 185 (292)
T ss_pred chh--hHHHHHHHHHHHHhheeccC--C------cCcCCHHHHHHHHHHhHHHHHHHHHcchhcc--cCCCchHHHHHHH
Confidence 554 44455667788777654421 1 1256789999999999999999999888754 2233444555556
Q ss_pred HHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHH-HHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhcc
Q 019984 196 CSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVAT-TSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFR 274 (333)
Q Consensus 196 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~-l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fg 274 (333)
++.++.+|+-+..... .+ .+|.....-+..++++. +-+.+-.-++++.++-+.++...++|.+..+.+++++|
T Consensus 186 vAaviv~Pig~~~ag~----~l--~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~ 259 (292)
T COG5006 186 VAALIVLPIGAAQAGP----AL--FSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLG 259 (292)
T ss_pred HHHHHHhhhhhhhcch----hh--cChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhc
Confidence 6677777764433221 11 25554433333344443 33445555899999999999999999999999999999
Q ss_pred CCCcccccchhhhhhhhhh
Q 019984 275 HPLSWEQCIGSIIVFGALY 293 (333)
Q Consensus 275 e~~t~~~~iG~~lvl~Gv~ 293 (333)
|.+|+.||+|++.|+.+..
T Consensus 260 e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 260 ETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred CCCCHHHHHHHHHHHHHHh
Confidence 9999999999999997654
No 35
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.03 E-value=1.7e-09 Score=86.46 Aligned_cols=123 Identities=18% Similarity=0.243 Sum_probs=96.4
Q ss_pred hhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHH-HHHHHHHHHHH
Q 019984 167 FDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTV-ATTSQFFISYT 245 (333)
Q Consensus 167 ~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~-~~l~~~~~~~~ 245 (333)
++|.+.+..|+..++ .|+....++....+.+ .++.....+... ....+++.+...++.+.. +.+++.+.+++
T Consensus 2 ~~a~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 74 (126)
T PF00892_consen 2 SWAIYSVFSKKLLKK--ISPLSITFWRFLIAGI-LLILLLILGRKP----FKNLSPRQWLWLLFLGLLGTALAYLLYFYA 74 (126)
T ss_pred eeeeHHHHHHHHhcc--CCHHHHHHHHHHHHHH-HHHHHHhhcccc----ccCCChhhhhhhhHhhccceehHHHHHHHH
Confidence 578888899888875 6889999999888886 554433332211 111244455555666555 57888899999
Q ss_pred HHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhh
Q 019984 246 IRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS 296 (333)
Q Consensus 246 i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~ 296 (333)
+++.++...++...+.|+++.++++++++|++++.+++|+.+++.|+.+..
T Consensus 75 ~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 75 LKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999987643
No 36
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.03 E-value=6.9e-10 Score=87.76 Aligned_cols=134 Identities=14% Similarity=0.132 Sum_probs=107.4
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHHH
Q 019984 158 VSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATT 237 (333)
Q Consensus 158 ~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l 237 (333)
..+.++++++.++..++.|-=.+ ++||....+.-++...+++...+...|+....-. -+++.|..+.+.++.+.+
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl~--~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~---~~~k~~lflilSGla~gl 79 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGLE--GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGE---IGPKSWLFLILSGLAGGL 79 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc--ccCccHHHHHHHHHHHHHHHHHHHhcCceecccc---cCcceehhhhHHHHHHHH
Confidence 34677788888998888865444 5677777777777777777777777776432111 256777777777888888
Q ss_pred HHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhh
Q 019984 238 SQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS 296 (333)
Q Consensus 238 ~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~ 296 (333)
+-+++|++++.-.+..+..+.-+.+++++++|++++||++|..+|+|+.++..|..+.+
T Consensus 80 swl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 80 SWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 88999999999999999999999999999999999999999999999999999976543
No 37
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.85 E-value=1.3e-07 Score=87.94 Aligned_cols=139 Identities=12% Similarity=0.116 Sum_probs=105.2
Q ss_pred chHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHH
Q 019984 153 NTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLS 232 (333)
Q Consensus 153 ~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~ 232 (333)
....|..+++++.+++|...+..|.. . +.+|.+..++...++.++.++.....++....... .+++..+.....-+
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~--~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 80 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-Y--YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTL-IQTPQKIFMLAVSA 80 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-c--CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH-HcCHHHHHHHHHHH
Confidence 45679999999999999999999653 3 57899999999999987776665444432111110 01233322222223
Q ss_pred HHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhh
Q 019984 233 TVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR 295 (333)
Q Consensus 233 ~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~ 295 (333)
+.....+.+.++++++.++...++...+.|+++.++++++++|+++..+|+|+++.+.|+.+.
T Consensus 81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li 143 (296)
T PRK15430 81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQ 143 (296)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH
Confidence 444456788999999999999999999999999999999999999999999999999997654
No 38
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.80 E-value=1.8e-07 Score=85.08 Aligned_cols=136 Identities=13% Similarity=0.108 Sum_probs=102.9
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhh-hChHh-HHHHHHHHHH
Q 019984 157 GVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVY-HHLDC-FFDVALLSTV 234 (333)
Q Consensus 157 G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~-~~~il~l~~~ 234 (333)
|..+++++.++++...+..|. .. +.+|.+..++-.+++.+++.+.....++......... .+... +..+...++.
T Consensus 3 g~~~~i~a~~~wg~~~~~~k~-~~--~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 3 GIIVSLLASFLFGYMYYYSKL-LK--PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred cHHHHHHHHHHHHHHHHHHHH-hc--cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 788899999999999999976 33 4899999999999998777665544433111100111 11111 2223333555
Q ss_pred HHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhh
Q 019984 235 ATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR 295 (333)
Q Consensus 235 ~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~ 295 (333)
....+.+.+++++++++.+.+++..+.|+++.+++.++++|+++..+|+|..+.+.|+.+-
T Consensus 80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li 140 (256)
T TIGR00688 80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISN 140 (256)
T ss_pred HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 5667788999999999999999999999999999999999999999999999999997643
No 39
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.52 E-value=1.4e-06 Score=80.25 Aligned_cols=132 Identities=9% Similarity=-0.014 Sum_probs=93.3
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHHH
Q 019984 158 VSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATT 237 (333)
Q Consensus 158 ~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l 237 (333)
+.+.+.+.++++...+..|+..++. ++ ..++....+.+...|........ . .+.....+.+..++..++....
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~--~~--~~~~~~~~~~~~l~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~ 75 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKE--PD--FLWWALLAHSVLLTPYGLWYLAQ-V--GWSRLPATFWLLLAISAVANMV 75 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCch--hH--HHHHHHHHHHHHHHHHHHHhccc-C--CCCCcchhhHHHHHHHHHHHHH
Confidence 3567788889999999998765532 22 33555566666666654332110 0 1100112223233333555667
Q ss_pred HHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhh
Q 019984 238 SQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS 296 (333)
Q Consensus 238 ~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~ 296 (333)
++.+.++++++.++...+++..+.|+++.+++++++||+++..+|+|+++++.|+.+-.
T Consensus 76 ~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~ 134 (281)
T TIGR03340 76 YFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLG 134 (281)
T ss_pred HHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHh
Confidence 77888899999999999999999999999999999999999999999999999987654
No 40
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.43 E-value=5.1e-06 Score=79.25 Aligned_cols=139 Identities=14% Similarity=0.103 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHH
Q 019984 156 WGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVA 235 (333)
Q Consensus 156 ~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~ 235 (333)
.-++.++.-.++++-..++.|..++ .++++....++-..++.++++|.....+... .....+.+.|..+..+++++
T Consensus 13 ~~~~~~~~~q~~~~~~~~~~k~a~~-~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~---~~~~~~~~~~~~l~l~g~~g 88 (358)
T PLN00411 13 VFLTAMLATETSVVGISTLFKVATS-KGLNIYPFLGYSYLLASLLLLPSLFFTNRSR---SLPPLSVSILSKIGLLGFLG 88 (358)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHH-CCCCccHHHHHHHHHHHHHHHHHHHHHHHhc---ccCcchHHHHHHHHHHHHHH
Confidence 3445566666777888888887774 5899999999999998888777654321100 00001223444555566666
Q ss_pred HHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhh------ccCCCcccccchhhhhhhhhhhhhhh
Q 019984 236 TTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVW------FRHPLSWEQCIGSIIVFGALYTRSFF 298 (333)
Q Consensus 236 ~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~------fge~~t~~~~iG~~lvl~Gv~~~~~~ 298 (333)
++.+.+.+..+++++|...+++.++.|+++.++++++ ++|+++..+++|.++.+.|+.+-...
T Consensus 89 ~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~ 157 (358)
T PLN00411 89 SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFY 157 (358)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHc
Confidence 5556678889999999999999999999999999999 69999999999999999998765543
No 41
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.32 E-value=0.0002 Score=65.12 Aligned_cols=171 Identities=11% Similarity=0.084 Sum_probs=117.3
Q ss_pred HHHHHHhCcccCchhHH----HHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcC
Q 019984 107 IWGTLIMQKRYKGYDYF----LALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGY 182 (333)
Q Consensus 107 ll~~l~~~~k~s~~~~l----~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~ 182 (333)
+++.++++|--+..+++ +++++++|+.+.+..+++++ +.+++.+...|+...+++.+.+..|.+..+- .
T Consensus 88 l~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~---~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~----~ 160 (269)
T PF06800_consen 88 LIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSD---KSSSKSNMKKGILALLISTIGYWIYSVIPKA----F 160 (269)
T ss_pred HHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcccccccc---ccccccchhhHHHHHHHHHHHHHHHHHHHHh----c
Confidence 78899999988877765 88889999999888753211 1112345667999999999998888888643 3
Q ss_pred CCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHH
Q 019984 183 DMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQ 262 (333)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~ 262 (333)
+.++++..+-..+--.+-.+.+.....+ .+ .+...|.. +.-++.=.+++++++...++.|..+.=..+-+..
T Consensus 161 ~~~~~~~~lPqaiGm~i~a~i~~~~~~~-----~~--~~k~~~~n-il~G~~w~ignl~~~is~~~~G~a~af~lSQ~~v 232 (269)
T PF06800_consen 161 HVSGWSAFLPQAIGMLIGAFIFNLFSKK-----PF--FEKKSWKN-ILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGV 232 (269)
T ss_pred CCChhHhHHHHHHHHHHHHHHHhhcccc-----cc--cccchHHh-hHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHH
Confidence 5677766654433222222222222211 11 12233333 2225555678889999999999999999999999
Q ss_pred HHHHHhHhhhccCCCcccc----cchhhhhhhhh
Q 019984 263 LVSIVLSCVWFRHPLSWEQ----CIGSIIVFGAL 292 (333)
Q Consensus 263 v~sills~~~fge~~t~~~----~iG~~lvl~Gv 292 (333)
+.+.+.+++++||+-+.++ ++|.++++.|.
T Consensus 233 vIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~ 266 (269)
T PF06800_consen 233 VISTLGGIFILKEKKTKKEMIYTLIGLILIVIGA 266 (269)
T ss_pred HHHHhhhheEEEecCchhhHHHHHHHHHHHHHhh
Confidence 9999999999999988775 45777776654
No 42
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.27 E-value=2.1e-05 Score=62.41 Aligned_cols=102 Identities=16% Similarity=0.230 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHH-HHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhc
Q 019984 195 LCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVAT-TSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWF 273 (333)
Q Consensus 195 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~-l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~f 273 (333)
.++.++..+.....++..+......+++ +......++++. .++.++++++++.++ ..+++..+.|+++.++|.++|
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~ 82 (113)
T PF13536_consen 6 LFSVLFLLIILLIRGRLRDLFRALRRKP--WLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFF 82 (113)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHh
Confidence 3444555555455555433323222332 223334455444 666788889999995 777999999999999999999
Q ss_pred cCCCcccccchhhhhhhhhhhhhhhc
Q 019984 274 RHPLSWEQCIGSIIVFGALYTRSFFK 299 (333)
Q Consensus 274 ge~~t~~~~iG~~lvl~Gv~~~~~~k 299 (333)
+|+++..+|+|+++++.|+.+-.+..
T Consensus 83 ~er~~~~~~~a~~l~~~Gv~li~~~~ 108 (113)
T PF13536_consen 83 KERLSPRRWLAILLILIGVILIAWSD 108 (113)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999988776654
No 43
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.25 E-value=3.1e-05 Score=62.96 Aligned_cols=119 Identities=8% Similarity=0.079 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHH-HHH
Q 019984 156 WGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALL-STV 234 (333)
Q Consensus 156 ~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l-~~~ 234 (333)
.|+++++++.++.+...++-|+=.++.+. .+.... .. ..+. ...+|..+ +++ .++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~--~~~~~~-~~-------~~~~-----------~~~~p~~~---i~lgl~~ 57 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPL--LSHAWD-FI-------AALL-----------AFGLALRA---VLLGLAG 57 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCC--ccchhH-HH-------HHHH-----------HHhccHHH---HHHHHHH
Confidence 37888888999888888887766554431 111000 00 0000 00122111 223 334
Q ss_pred HHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhh--hccCCCcccccchhhhhhhhhhhhhhh
Q 019984 235 ATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCV--WFRHPLSWEQCIGSIIVFGALYTRSFF 298 (333)
Q Consensus 235 ~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~--~fge~~t~~~~iG~~lvl~Gv~~~~~~ 298 (333)
..++..++.+++++.+...+..+..+..+...+.++. +|||++|+.+++|+++++.|+.+....
T Consensus 58 ~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~ 123 (129)
T PRK02971 58 YALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP 123 (129)
T ss_pred HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 4456678888999999999999988888888888885 899999999999999999999886643
No 44
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.19 E-value=3.9e-05 Score=69.56 Aligned_cols=140 Identities=13% Similarity=0.126 Sum_probs=106.1
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHH
Q 019984 154 TVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLST 233 (333)
Q Consensus 154 ~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~ 233 (333)
..-|+++.+.+-+.+|+.-.+.+-+ + ..++.|+..+--+++.++.+..+...++..+-.+ ..++|+.+......+.
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll-~--~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~-~~~~p~~~~~~~l~a~ 80 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLL-E--PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQ-LLKQPKTLLMLALTAL 80 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHH-c--cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH-HHhCcHHHHHHHHHHH
Confidence 3469999999999999999888544 4 4688999999999999888777666655433322 3456665543332222
Q ss_pred HHHHHHH-HHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhh
Q 019984 234 VATTSQF-FISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF 298 (333)
Q Consensus 234 ~~~l~~~-~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~ 298 (333)
. ...|. .+.+++.+-..+.+|+--.+.|.+.+++|.++++|+++..||+..++...|+....+.
T Consensus 81 l-i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~ 145 (293)
T COG2962 81 L-IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL 145 (293)
T ss_pred H-HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 2 12443 3334788888999999999999999999999999999999999999999998776654
No 45
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.18 E-value=2.6e-05 Score=70.62 Aligned_cols=116 Identities=12% Similarity=0.082 Sum_probs=85.3
Q ss_pred hhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHH-HHHHHHHHHHHHHH
Q 019984 169 GFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLST-VATTSQFFISYTIR 247 (333)
Q Consensus 169 a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~-~~~l~~~~~~~~i~ 247 (333)
|...+..|...+. ..++.+..++-.+.+.+++.+..... ...+.+...+..+. ...+.+.+.+++++
T Consensus 2 g~~~~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~ 69 (260)
T TIGR00950 2 GTTGVVIGQYLEG-QVPLYFAVFRRLIFALLLLLPLLRRR-----------PPLKRLLRLLLLGALQIGVFYVLYFVAVK 69 (260)
T ss_pred cchHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHhc-----------cCHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555543 46788888888887777666543222 11122333344433 34566678888999
Q ss_pred hhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhh
Q 019984 248 TFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS 296 (333)
Q Consensus 248 ~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~ 296 (333)
+.++...+++..+.|+++.+++.++++|++++.+++|+.+.+.|+.+..
T Consensus 70 ~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~ 118 (260)
T TIGR00950 70 RLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLL 118 (260)
T ss_pred hcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhc
Confidence 9999999999999999999999999999999999999999999977754
No 46
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.17 E-value=5.6e-05 Score=70.11 Aligned_cols=127 Identities=15% Similarity=0.101 Sum_probs=94.3
Q ss_pred HHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHH-HHH
Q 019984 160 LMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVA-TTS 238 (333)
Q Consensus 160 l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~-~l~ 238 (333)
+.++-.+.+|...+..|.... +.+|.+..++-..++.+++++....++.-. ...+.+......+... ..+
T Consensus 12 ~~~~~~~iWg~~~~~~K~~~~--~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~-------~~~~~~~~~~~~g~~~~~~~ 82 (292)
T PRK11272 12 ALFALYIIWGSTYLVIRIGVE--SWPPLMMAGVRFLIAGILLLAFLLLRGHPL-------PTLRQWLNAALIGLLLLAVG 82 (292)
T ss_pred HHHHHHHHHhhHHHHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHHHHhCCCC-------CcHHHHHHHHHHHHHHHHHH
Confidence 345556788998888876655 689999999999998888777654443210 1122344444444443 344
Q ss_pred HHHHHHHH-HhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhh
Q 019984 239 QFFISYTI-RTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS 296 (333)
Q Consensus 239 ~~~~~~~i-~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~ 296 (333)
+.+.+.+. ++.++...++...+.|+++.+++.+ ++|+++..+++|..+.+.|+.+-.
T Consensus 83 ~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~ 140 (292)
T PRK11272 83 NGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLN 140 (292)
T ss_pred HHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHh
Confidence 55666777 8999999999999999999999985 799999999999999999977654
No 47
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=98.03 E-value=0.00011 Score=68.56 Aligned_cols=131 Identities=11% Similarity=0.018 Sum_probs=96.6
Q ss_pred hhhHHHHHHHHhcCCCC--hHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHHHHHHHHHHHH
Q 019984 169 GFTSTFQDKLFKGYDME--IHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTI 246 (333)
Q Consensus 169 a~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l~~~~~~~~i 246 (333)
..+++.||++.++...+ +.-+.+.......+...+.....+... .....+...+..+++..++..+.+.++
T Consensus 13 ~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~al 85 (303)
T PF08449_consen 13 CSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPK-------SRKIPLKKYAILSFLFFLASVLSNAAL 85 (303)
T ss_pred HHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccC-------CCcChHHHHHHHHHHHHHHHHHHHHHH
Confidence 34668899998875444 666666666666665555443333000 111123344555777777778888999
Q ss_pred HhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhccccCCCC
Q 019984 247 RTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPR 306 (333)
Q Consensus 247 ~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~~~~~~~ 306 (333)
++.+--+..+.-..+++.++++++++++++.+..++++..++..|+.+....+.++++..
T Consensus 86 ~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~ 145 (303)
T PF08449_consen 86 KYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSS 145 (303)
T ss_pred HhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccccc
Confidence 999999999999999999999999999999999999999999999998887765544433
No 48
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.01 E-value=0.00012 Score=68.12 Aligned_cols=123 Identities=11% Similarity=0.085 Sum_probs=87.8
Q ss_pred hhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHHHHHHHHHHHH
Q 019984 167 FDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTI 246 (333)
Q Consensus 167 ~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l~~~~~~~~i 246 (333)
++...++++|.+++.+ ..|..+.+....++.+...+. ...+.... ...+.+.|..++..+++..+.+.+.+.++
T Consensus 13 ~~~~~~~~NK~~l~~~-~~P~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~l 86 (302)
T TIGR00817 13 LNVYFNIYNKKLLNVF-PYPYFKTLISLAVGSLYCLLS-WSSGLPKR----LKISSALLKLLLPVAIVHTIGHVTSNVSL 86 (302)
T ss_pred HHHHHHHHHHHHHhhC-ChhHHHHHHHHHHHHHHHHHH-HHhCCCCC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344456778877753 356666666555555443332 11111000 00123456666677777777778888999
Q ss_pred HhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhh
Q 019984 247 RTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR 295 (333)
Q Consensus 247 ~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~ 295 (333)
+++++...+++..+.|+++.+++.++++|+++..+++|.+++++|+.+.
T Consensus 87 ~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~ 135 (302)
T TIGR00817 87 SKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALA 135 (302)
T ss_pred HhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999998654
No 49
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=97.95 E-value=0.0002 Score=68.32 Aligned_cols=133 Identities=8% Similarity=-0.013 Sum_probs=95.2
Q ss_pred HHHHHHHHhhhhhHHHHHHHHhcCCCC-hHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHHH
Q 019984 159 SLMVGYLGFDGFTSTFQDKLFKGYDME-IHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATT 237 (333)
Q Consensus 159 ~l~l~s~~~~a~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l 237 (333)
.+++.--.++...+.+.|.+++.. + |+.+.....+++.+++.+... .+. .+..++ ......+..++.+++++..
T Consensus 52 ~~~~~wy~~s~~~~~~nK~vl~~~--~~P~~l~~~~~~~~~l~~~~~~~-~~~-~~~~~~-~~~~~~~~~llp~gl~~~~ 126 (350)
T PTZ00343 52 LLFLTWYALNVLYVVDNKLALNML--PLPWTISSLQLFVGWLFALLYWA-TGF-RKIPRI-KSLKLFLKNFLPQGLCHLF 126 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC--ChhHHHHHHHHHHHHHHHHHHHH-hCC-CCCCCC-CCHHHHHHHHHHHHHHHHH
Confidence 334444445566678888888754 4 888888877777665443321 111 000001 0012345566777888877
Q ss_pred HHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhh
Q 019984 238 SQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS 296 (333)
Q Consensus 238 ~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~ 296 (333)
++...+.+++..++...+++..+.|+++++++.++++|+++..+++|.+++++|+.+..
T Consensus 127 ~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~ 185 (350)
T PTZ00343 127 VHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS 185 (350)
T ss_pred HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence 77666788999999999999999999999999999999999999999999999987754
No 50
>PRK11689 aromatic amino acid exporter; Provisional
Probab=97.94 E-value=0.00017 Score=66.95 Aligned_cols=128 Identities=5% Similarity=-0.051 Sum_probs=88.5
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHH
Q 019984 157 GVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVAT 236 (333)
Q Consensus 157 G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~ 236 (333)
++++++.+.+++|...+..|...+ +.+|....++-...+.+++++.. .. +. . .+.+ +..++..++...
T Consensus 5 ~~l~~l~a~~~Wg~~~~~~k~~~~--~~~P~~~~~~R~~~a~l~l~~~~--~~--~~-~---~~~~--~~~~~~~~l~~~ 72 (295)
T PRK11689 5 ATLIGLIAILLWSTMVGLIRGVSE--SLGPVGGAAMIYSVSGLLLLLTV--GF--PR-L---RQFP--KRYLLAGGLLFV 72 (295)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHc--cCChHHHHHHHHHHHHHHHHHHc--cc--cc-c---cccc--HHHHHHHhHHHH
Confidence 456677888899999888887665 47888888888777776665432 11 00 0 0111 112222222222
Q ss_pred HHHHHHHHHH----HhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhh
Q 019984 237 TSQFFISYTI----RTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS 296 (333)
Q Consensus 237 l~~~~~~~~i----~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~ 296 (333)
..+.+.+..+ +..++.+.+++..+.|+++.++++++++|+++..+|+|+++.+.|+.+-.
T Consensus 73 ~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~ 136 (295)
T PRK11689 73 SYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVL 136 (295)
T ss_pred HHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhhee
Confidence 3334444444 45678888999999999999999999999999999999999999986654
No 51
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=97.93 E-value=0.00024 Score=66.11 Aligned_cols=123 Identities=11% Similarity=-0.022 Sum_probs=87.7
Q ss_pred HHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHHHH
Q 019984 159 SLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTS 238 (333)
Q Consensus 159 ~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l~ 238 (333)
.+.+++.+++|...+..|...+ +.+|....++-..++.+..++...... . .+..++..++....+
T Consensus 7 l~~l~~~~~Wg~~~~~~k~~~~--~~~p~~~~~~R~~~a~~~l~~~~~~~~-----------~--~~~~~~~~g~~~~~~ 71 (299)
T PRK11453 7 VLALLVVVVWGLNFVVIKVGLH--NMPPLMLAGLRFMLVAFPAIFFVARPK-----------V--PLNLLLGYGLTISFG 71 (299)
T ss_pred HHHHHHHHHHhhhHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHHHhcCCC-----------C--chHHHHHHHHHHHHH
Confidence 3466778899999999987665 578999888888776654443321110 1 111222334433333
Q ss_pred H-HHHHHHHHh-hChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhh
Q 019984 239 Q-FFISYTIRT-FGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS 296 (333)
Q Consensus 239 ~-~~~~~~i~~-~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~ 296 (333)
+ .+.+..+++ .++...+++..+.|+++.++++++++|+++..+++|.++.+.|+.+-.
T Consensus 72 ~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~ 131 (299)
T PRK11453 72 QFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLI 131 (299)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhc
Confidence 3 355567776 577888999999999999999999999999999999999999976554
No 52
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.73 E-value=0.00018 Score=56.93 Aligned_cols=59 Identities=7% Similarity=0.102 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhh
Q 019984 237 TSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR 295 (333)
Q Consensus 237 l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~ 295 (333)
+..++..+++++.+...+-....+.++.+.++|+++|||++|+.+++|+++++.|+..-
T Consensus 49 l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i 107 (111)
T PRK15051 49 LAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVIL 107 (111)
T ss_pred HHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence 45567777899999999998888999999999999999999999999999999997653
No 53
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.71 E-value=0.00047 Score=63.98 Aligned_cols=131 Identities=14% Similarity=0.029 Sum_probs=89.9
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHH
Q 019984 157 GVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVAT 236 (333)
Q Consensus 157 G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~ 236 (333)
|+++++++++++|...+..|++. +.++.+.+. ..++.++........+.. .. +.+..+..-+..+..=.
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~---g~~~~~~~~--~~~g~l~~~~~~~~~~~~----~~--~~~~~~~~g~l~G~~w~ 70 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG---GGPYSQTLG--TTFGALILSIAIAIFVLP----EF--WALSIFLVGLLSGAFWA 70 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC---CCHHHHHHH--HHHHHHHHHHHHHHHhCC----cc--cccHHHHHHHHHHHHHH
Confidence 57788899999999999997754 455555442 233333332222121110 00 12333332223344445
Q ss_pred HHHHHHHHHHHhhChhHHHHHHH-HHHHHHHHhHhhhccCCCcccc----cchhhhhhhhhhhhhhh
Q 019984 237 TSQFFISYTIRTFGALTFATIMT-TRQLVSIVLSCVWFRHPLSWEQ----CIGSIIVFGALYTRSFF 298 (333)
Q Consensus 237 l~~~~~~~~i~~~~alt~sv~~~-l~~v~sills~~~fge~~t~~~----~iG~~lvl~Gv~~~~~~ 298 (333)
.+|++++.++++.|....-.+.+ +.++.+.+.+.++|||+.+..+ ++|.++++.|+.+....
T Consensus 71 ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~ 137 (290)
T TIGR00776 71 LGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRS 137 (290)
T ss_pred hhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEec
Confidence 78899999999999998877777 8888999999999999999999 99999999998776433
No 54
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=97.69 E-value=0.0002 Score=61.28 Aligned_cols=174 Identities=10% Similarity=0.149 Sum_probs=111.8
Q ss_pred HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCh
Q 019984 107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEI 186 (333)
Q Consensus 107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~ 186 (333)
+++++.+|.|+...+++++++...|+++..+.|. + ....+.|+.+.+.|++..|+|-+..|+....-+.
T Consensus 95 iLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN--~-------~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~-- 163 (290)
T KOG4314|consen 95 ILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN--E-------HADEIIGIACAVGSAFMAALYKVLFKMFIGNANF-- 163 (290)
T ss_pred HHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc--h-------hhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcc--
Confidence 8899999999999999999999999999988742 2 1468899999999999999999999887764322
Q ss_pred HHHHHHhhHHHH---HH-HHHH--HHhcCchhHHHHhhhhChHhHHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHH
Q 019984 187 HNQIFYTTLCSC---VL-SLSG--LILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTT 260 (333)
Q Consensus 187 ~~~~~~~~~~~~---~~-~~~~--~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l 260 (333)
-+...+++..+. ++ ..|. +.++|- +.++-. ....|..+...+..+..-++.+...+....|...|+-+..
T Consensus 164 Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~V--E~~qsF--A~~PWG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~ 239 (290)
T KOG4314|consen 164 GDAAHFMSCLGFFNLCFISFPALILAFTGV--EHLQSF--AAAPWGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLC 239 (290)
T ss_pred hhHHHHHHHHHHHHHHHHhhhHHHHHHhch--HHHHHH--hhCCchhhhhHHHHHHHHhhheeehhhhhchhhheehhee
Confidence 122222222222 21 1222 334442 111111 1122444333333333334455556777788877776666
Q ss_pred HHHHHHHhHhhhccCCCcccccchhhhhhhhhhhh
Q 019984 261 RQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR 295 (333)
Q Consensus 261 ~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~ 295 (333)
.--....+..++=+-..+.....|..++..|..+-
T Consensus 240 ~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLi 274 (290)
T KOG4314|consen 240 GIPGNAAIDILFQELEFNTLFLAATCIICIGFILI 274 (290)
T ss_pred cCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHhe
Confidence 65566666666555567888888888888885443
No 55
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.53 E-value=0.0004 Score=62.74 Aligned_cols=71 Identities=11% Similarity=0.174 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhcccc
Q 019984 232 STVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVS 302 (333)
Q Consensus 232 ~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~~~ 302 (333)
+++..+.+...+.++++.+|.+..+....|-+++.++++++++++++..||++..+.+.|+.+........
T Consensus 24 A~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 24 ALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 55555667889999999999999999999999999999999999999999999999999998877665544
No 56
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.52 E-value=0.0018 Score=61.01 Aligned_cols=75 Identities=12% Similarity=0.269 Sum_probs=67.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhh
Q 019984 224 CFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF 298 (333)
Q Consensus 224 ~~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~ 298 (333)
.|+..+.++++-+.++++...+.+.++.+..++.....-++++++|+++++++.++.|++|+.++++|+.+....
T Consensus 78 ~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~s 152 (334)
T PF06027_consen 78 PWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVS 152 (334)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeee
Confidence 344455568888899999999999999999999999999999999999999999999999999999998776554
No 57
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.49 E-value=0.0043 Score=56.45 Aligned_cols=141 Identities=12% Similarity=0.014 Sum_probs=90.8
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHH
Q 019984 154 TVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLST 233 (333)
Q Consensus 154 ~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~ 233 (333)
...+....+...+.++......+..... ..+.....+....++.+...+....... . .. ......+...+.-.+
T Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~-~~~~~~~~~~~~~~~ 78 (292)
T COG0697 5 LLLGLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALLLLPLLLLEPR--G--LR-PALRPWLLLLLLALL 78 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHHHHHHhhcc--c--cc-ccccchHHHHHHHHH
Confidence 4556666666667778877777665543 2344444444555544442222111110 0 00 011111222222244
Q ss_pred HHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHh-hhccCCCcccccchhhhhhhhhhhhhhhcc
Q 019984 234 VATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSC-VWFRHPLSWEQCIGSIIVFGALYTRSFFKK 300 (333)
Q Consensus 234 ~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~-~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~ 300 (333)
....++.+++..+++.++...++...+.|+++.+++. ++++|+++..+++|..+.+.|+.+......
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~ 146 (292)
T COG0697 79 GLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGG 146 (292)
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCC
Confidence 5556667888899999999999999999999999996 777999999999999999999887665443
No 58
>COG2510 Predicted membrane protein [Function unknown]
Probab=97.42 E-value=0.00065 Score=54.22 Aligned_cols=83 Identities=10% Similarity=0.026 Sum_probs=54.5
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHHhcCCCCC---CCchhhHHHHHHHHHhhhhhhHH-----------------------H
Q 019984 54 YSLFLVFCNRLMTSAVSAGTLIASRKAIDP---VAPVYKYCLVSMSNILTTTCQYE-----------------------I 107 (333)
Q Consensus 54 ~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~y~~~s~~~~~a~~~~~~-----------------------l 107 (333)
.|.|-+++|.++..+...+.....++...+ ....+.|...|=.....++.-|. +
T Consensus 30 dp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~l 109 (140)
T COG2510 30 DPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVL 109 (140)
T ss_pred CccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHH
Confidence 577889999888887776665554432222 11223444333222222222111 8
Q ss_pred HHHHHhCcccCchhHHHHHHHHHhhHHhh
Q 019984 108 WGTLIMQKRYKGYDYFLALLVTLGCSIFI 136 (333)
Q Consensus 108 l~~l~~~~k~s~~~~l~vlli~~Gv~l~~ 136 (333)
++++++|||++..+|++++++++|+++.+
T Consensus 110 ls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 110 LSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 99999999999999999999999988764
No 59
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.34 E-value=0.0043 Score=58.63 Aligned_cols=145 Identities=11% Similarity=0.080 Sum_probs=93.1
Q ss_pred chHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHH--HHHH---HHHhcCchhHHHHhhhhChHhHHH
Q 019984 153 NTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCV--LSLS---GLILEGHLFLAIDFVYHHLDCFFD 227 (333)
Q Consensus 153 ~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~g~~~~~~~~~~~~~~~~~~ 227 (333)
+...|+++++++.+|++-..+-+|+ .++. ++|.. +. ..+.. +..| ..+..++..+.+. +.++..+..
T Consensus 4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w---~wE~~-W~-v~gi~~wl~~~~~~g~~~~~~f~~~~~--~~~~~~~~~ 75 (345)
T PRK13499 4 AIILGIIWHLIGGASSGSFYAPFKK-VKKW---SWETM-WS-VGGIFSWLILPWLIAALLLPDFWAYYS--SFSGSTLLP 75 (345)
T ss_pred hhHHHHHHHHHHHHHhhcccccccc-cCCC---chhHH-HH-HHHHHHHHHHHHHHHHHHhhhHHHHHH--hcCHHHHHH
Confidence 4678999999999999999988876 4433 35544 33 22221 1122 1222233322221 135555554
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhChhHH-HHHHHHHHHHHHHhHhhhccCC---Cc----ccccchhhhhhhhhhhhhhhc
Q 019984 228 VALLSTVATTSQFFISYTIRTFGALTF-ATIMTTRQLVSIVLSCVWFRHP---LS----WEQCIGSIIVFGALYTRSFFK 299 (333)
Q Consensus 228 il~l~~~~~l~~~~~~~~i~~~~alt~-sv~~~l~~v~sills~~~fge~---~t----~~~~iG~~lvl~Gv~~~~~~k 299 (333)
-++.+..=.+||+..+..+++.|-... .+..-+.-+.+.+++.+++||= ++ ....+|.++++.|+.+..+.-
T Consensus 76 ~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag 155 (345)
T PRK13499 76 VFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAG 155 (345)
T ss_pred HHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 444566666899999999999986554 4455567789999999999852 23 335778889999999988865
Q ss_pred cccCCC
Q 019984 300 KVSEKP 305 (333)
Q Consensus 300 ~~~~~~ 305 (333)
.+|+++
T Consensus 156 ~~k~~~ 161 (345)
T PRK13499 156 QLKERK 161 (345)
T ss_pred hhcccc
Confidence 544443
No 60
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=97.34 E-value=0.00082 Score=53.14 Aligned_cols=30 Identities=20% Similarity=0.290 Sum_probs=28.0
Q ss_pred HHHHHHhCcccCchhHHHHHHHHHhhHHhh
Q 019984 107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFI 136 (333)
Q Consensus 107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~ 136 (333)
+++++++||+++++++++++++++|+++..
T Consensus 96 i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 96 ILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999998764
No 61
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.15 E-value=0.015 Score=47.73 Aligned_cols=129 Identities=15% Similarity=0.187 Sum_probs=87.6
Q ss_pred HHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHH-HHHHHH
Q 019984 159 SLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALL-STVATT 237 (333)
Q Consensus 159 ~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l-~~~~~l 237 (333)
++.+.+-++-+++...+-++.++.+ ||+...+.+...+++.+....+..++. ........| |+ .++ ++++.+
T Consensus 4 lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p--~w--~~lGG~lG~~ 76 (138)
T PF04657_consen 4 LLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRP--SLASLSSVP--WW--AYLGGLLGVF 76 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCC--hH--HhccHHHHHH
Confidence 3445555566777777777766544 588888888888888777765555442 111111122 22 223 667766
Q ss_pred HHHHHHHHHHhhChhHHHHHHHHHH-HHHHHhHhh-hcc---CCCcccccchhhhhhhhhhh
Q 019984 238 SQFFISYTIRTFGALTFATIMTTRQ-LVSIVLSCV-WFR---HPLSWEQCIGSIIVFGALYT 294 (333)
Q Consensus 238 ~~~~~~~~i~~~~alt~sv~~~l~~-v~sills~~-~fg---e~~t~~~~iG~~lvl~Gv~~ 294 (333)
.-.+..+++++.|+.+.......-+ +.++++..+ +|| +++++...+|.++++.|+.+
T Consensus 77 ~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 77 FVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 6677778899999998888777744 567777776 443 68999999999999999763
No 62
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=97.12 E-value=0.013 Score=54.22 Aligned_cols=125 Identities=7% Similarity=-0.028 Sum_probs=87.2
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHH
Q 019984 154 TVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLST 233 (333)
Q Consensus 154 ~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~ 233 (333)
...|..+++++.++++......|...+ ..+|.+..++-..++.+++++....... . .+++.+...+..+.
T Consensus 10 ~~~~~~~~~la~~~~~~~~~~~K~~~~--~~~~~~~~~~R~~~a~l~l~~~~~~~~~-----~---~~~~~~~~~~~~g~ 79 (293)
T PRK10532 10 VWLPILLLLIAMASIQSGASLAKSLFP--LVGAPGVTALRLALGTLILIAIFKPWRL-----R---FAKEQRLPLLFYGV 79 (293)
T ss_pred cchHHHHHHHHHHHHHhhHHHHHHHHH--HcCHHHHHHHHHHHHHHHHHHHHhHHhc-----c---CCHHHHHHHHHHHH
Confidence 467899999999999999998887776 3688999999999987766654311110 0 12334444445555
Q ss_pred HHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhh
Q 019984 234 VATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYT 294 (333)
Q Consensus 234 ~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~ 294 (333)
+....+.+.++++++.++...+++..+.|+++.+++. |++.. +.+.++.+.|+.+
T Consensus 80 ~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~--~~~~~i~~~Gv~l 134 (293)
T PRK10532 80 SLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPVD--FVWVVLAVLGLWF 134 (293)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChHH--HHHHHHHHHHHhe
Confidence 5556667888899999999999999999999998872 43332 3344455555544
No 63
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.04 E-value=0.00056 Score=63.70 Aligned_cols=79 Identities=16% Similarity=0.245 Sum_probs=49.5
Q ss_pred hChHhHHHHHHHHHHHHHHH-HHHHHHHHhhChhHHHHHHH-HHHHHHHHhHhhhccC--CCccccc----chhhhhhhh
Q 019984 220 HHLDCFFDVALLSTVATTSQ-FFISYTIRTFGALTFATIMT-TRQLVSIVLSCVWFRH--PLSWEQC----IGSIIVFGA 291 (333)
Q Consensus 220 ~~~~~~~~il~l~~~~~l~~-~~~~~~i~~~~alt~sv~~~-l~~v~sills~~~fge--~~t~~~~----iG~~lvl~G 291 (333)
.+|..|..++.+ +...+.| .+...++++++++....+.. .=...+++-|.++|+| ..++.++ .|..+++.|
T Consensus 208 ~~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~G 286 (300)
T PF05653_consen 208 TYPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIG 286 (300)
T ss_pred hhhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHh
Confidence 455555443333 3445666 46677999998865443332 3445788889999997 4566444 466677788
Q ss_pred hhhhhhhc
Q 019984 292 LYTRSFFK 299 (333)
Q Consensus 292 v~~~~~~k 299 (333)
+++-+..|
T Consensus 287 V~lL~~~~ 294 (300)
T PF05653_consen 287 VFLLSSSK 294 (300)
T ss_pred hheeeccC
Confidence 87755443
No 64
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.03 E-value=0.0042 Score=49.68 Aligned_cols=62 Identities=16% Similarity=0.180 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHhhChhH-HHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhh
Q 019984 237 TSQFFISYTIRTFGALT-FATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF 298 (333)
Q Consensus 237 l~~~~~~~~i~~~~alt-~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~ 298 (333)
+..++...++++.+-.. .++..-+--+.+.++|+++|||++|+.+++|+++++.|+..-...
T Consensus 42 ~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~ 104 (120)
T PRK10452 42 LSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG 104 (120)
T ss_pred HHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence 44456666777777543 444456788889999999999999999999999999998765433
No 65
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.86 E-value=0.015 Score=45.91 Aligned_cols=61 Identities=15% Similarity=0.234 Sum_probs=47.8
Q ss_pred HHHHHHHHHHhhChhH-HHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhh
Q 019984 238 SQFFISYTIRTFGALT-FATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF 298 (333)
Q Consensus 238 ~~~~~~~~i~~~~alt-~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~ 298 (333)
...+...++++.+-.. .++-.-+.-+.+.++|+++|||++|+.+++|+++++.|+..-...
T Consensus 43 sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 43 SFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 3345555777777543 445566788899999999999999999999999999998776443
No 66
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=96.85 E-value=0.0068 Score=47.85 Aligned_cols=33 Identities=15% Similarity=0.302 Sum_probs=31.1
Q ss_pred HHHHHHhCcccCchhHHHHHHHHHhhHHhhccC
Q 019984 107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFP 139 (333)
Q Consensus 107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~ 139 (333)
+++++++|||.+++++++++++++|+++...++
T Consensus 76 ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~ 108 (113)
T PF13536_consen 76 LLSWLFFKERLSPRRWLAILLILIGVILIAWSD 108 (113)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence 889999999999999999999999999998873
No 67
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=96.70 E-value=0.013 Score=53.38 Aligned_cols=117 Identities=17% Similarity=0.151 Sum_probs=79.6
Q ss_pred CCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHH-
Q 019984 182 YDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTT- 260 (333)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l- 260 (333)
.+-+|.++.+.+.+-+.++.+...++..+..+ .++..+..-+..+++=.+||...|...++.|-.++-.+++-
T Consensus 8 ~gG~~~~Q~lG~t~Gali~alv~~~~~~p~~~------~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~ 81 (269)
T PF06800_consen 8 IGGKPANQILGTTIGALIFALVVFLFRQPAFS------MSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGL 81 (269)
T ss_pred eCCcHHHHHHHHHHHHHHHHHHHHHHhCCCcc------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhH
Confidence 35578888888877776666555444332110 12234433344466667899999999999998888877765
Q ss_pred HHHHHHHhHhhhccCCCcccccc----hhhhhhhhhhhhhhhccccCC
Q 019984 261 RQLVSIVLSCVWFRHPLSWEQCI----GSIIVFGALYTRSFFKKVSEK 304 (333)
Q Consensus 261 ~~v~sills~~~fge~~t~~~~i----G~~lvl~Gv~~~~~~k~~~~~ 304 (333)
+-+.+.++++++|||--+..+++ +.++++.|+.+.++.++++++
T Consensus 82 QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~ 129 (269)
T PF06800_consen 82 QLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDK 129 (269)
T ss_pred HHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccc
Confidence 55568999999999977766544 566677899888766554443
No 68
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.62 E-value=0.034 Score=43.73 Aligned_cols=59 Identities=10% Similarity=0.173 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHhhCh-hHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhh
Q 019984 237 TSQFFISYTIRTFGA-LTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR 295 (333)
Q Consensus 237 l~~~~~~~~i~~~~a-lt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~ 295 (333)
+..++...++|+.+- +..++-.-+--+.+.++|+++|||++|+.+++|+++++.|+..-
T Consensus 47 ~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 47 AAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 334455557777775 45567777788899999999999999999999999999998653
No 69
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=96.51 E-value=0.011 Score=55.01 Aligned_cols=120 Identities=13% Similarity=0.051 Sum_probs=82.2
Q ss_pred cchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHH
Q 019984 152 ENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALL 231 (333)
Q Consensus 152 ~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l 231 (333)
.+..+|+.+.+.+.++.+...++||+-..|.+.+... .++ ...++. .+| .|+. .+
T Consensus 3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~-------------------~~~--~~~~~l-~~~-~W~~--G~ 57 (300)
T PF05653_consen 3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLR-------------------AGS--GGRSYL-RRP-LWWI--GL 57 (300)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-------------------ccc--hhhHHH-hhH-HHHH--HH
Confidence 3578999999999999999999999876543211100 000 000010 122 2222 11
Q ss_pred HHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhh
Q 019984 232 STVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF 297 (333)
Q Consensus 232 ~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~ 297 (333)
. ...+|+...+.++...++...+..+.+.-+++.+++.+++||+++...++|.++++.|..+-..
T Consensus 58 ~-~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~ 122 (300)
T PF05653_consen 58 L-LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI 122 (300)
T ss_pred H-HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence 1 1234555556677777888889899999999999999999999999999999999998665443
No 70
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=96.48 E-value=0.11 Score=48.79 Aligned_cols=111 Identities=15% Similarity=0.159 Sum_probs=76.1
Q ss_pred CChHHHHHHhhHHHHHHHHHHHHhcCch--hHHHHhhhhChHh---HHHHHHHHHHHHH---HHHHHHHHHHhhChhHHH
Q 019984 184 MEIHNQIFYTTLCSCVLSLSGLILEGHL--FLAIDFVYHHLDC---FFDVALLSTVATT---SQFFISYTIRTFGALTFA 255 (333)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~---~~~il~l~~~~~l---~~~~~~~~i~~~~alt~s 255 (333)
..|....+.+-++-.+++...++.+... ....+. .+++. +...+-.++.+.+ =|...|.++.+.+|.|..
T Consensus 45 f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~--l~~~i~~~~~~~lk~~vPa~iYalqNnl~yval~~ldaatyq 122 (345)
T KOG2234|consen 45 FLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKS--LSKEILAAPRETLKVSVPALIYALQNNLQYVALSNLDAATYQ 122 (345)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhh--cCHHHHhChHHHHHHHHHHHHHHHhhhHHHHHHhcCCchhhh
Confidence 4555666666666666665554444211 111010 11111 2233444544443 335677789999999999
Q ss_pred HHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhh
Q 019984 256 TIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS 296 (333)
Q Consensus 256 v~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~ 296 (333)
+...+|-..+.++++++++++++..||....+-++|+.+.+
T Consensus 123 Vt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ 163 (345)
T KOG2234|consen 123 VTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ 163 (345)
T ss_pred hhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999998877
No 71
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.42 E-value=0.02 Score=44.71 Aligned_cols=59 Identities=7% Similarity=0.142 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHhhCh-hHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhh
Q 019984 237 TSQFFISYTIRTFGA-LTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR 295 (333)
Q Consensus 237 l~~~~~~~~i~~~~a-lt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~ 295 (333)
+..++...++|+.+- +..++-.-+--+.+.++|+++|||++|+.+++|+++++.|+..-
T Consensus 41 ~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l 100 (105)
T PRK11431 41 VSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL 100 (105)
T ss_pred HHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence 344555567777775 45667777888999999999999999999999999999997664
No 72
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.30 E-value=0.051 Score=42.25 Aligned_cols=60 Identities=13% Similarity=0.261 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHhhCh-hHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhh
Q 019984 237 TSQFFISYTIRTFGA-LTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS 296 (333)
Q Consensus 237 l~~~~~~~~i~~~~a-lt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~ 296 (333)
+...+.-.++|+.+- +..++-+-.--+.+.+.|+++|+|++++.+++|++++++|+..-.
T Consensus 42 ~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk 102 (106)
T COG2076 42 LSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLK 102 (106)
T ss_pred HHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhh
Confidence 334455567888775 456777778888999999999999999999999999999986544
No 73
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=96.10 E-value=0.002 Score=57.84 Aligned_cols=68 Identities=12% Similarity=0.213 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhc
Q 019984 232 STVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFK 299 (333)
Q Consensus 232 ~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k 299 (333)
++.++.|-+.+||++.+.+-.-+++++...|++++++++++++||.|....+|..+.+.|+.+....+
T Consensus 104 g~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp 171 (346)
T KOG4510|consen 104 GFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP 171 (346)
T ss_pred hhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence 78888888899999999999999999999999999999999999999999999999999988866543
No 74
>PRK13499 rhamnose-proton symporter; Provisional
Probab=95.92 E-value=1.1 Score=42.61 Aligned_cols=189 Identities=13% Similarity=0.024 Sum_probs=96.0
Q ss_pred HHHHHHhCccc---C----chhHHHHHHHHHhhHHhhccCCCCCCCCCC--CCCcchHHHHHHHHHHHHhhhhhH-----
Q 019984 107 IWGTLIMQKRY---K----GYDYFLALLVTLGCSIFILFPSGADLSPYS--KGRENTVWGVSLMVGYLGFDGFTS----- 172 (333)
Q Consensus 107 ll~~l~~~~k~---s----~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~--~~~~~~~~G~~l~l~s~~~~a~~~----- 172 (333)
+++.++++|-. + ..-.++++++++|+++.......+|.+... +++.+...|+.+++++.+.++.++
T Consensus 116 L~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~ 195 (345)
T PRK13499 116 LMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDA 195 (345)
T ss_pred HHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhh
Confidence 56666666432 2 335678899999999998832211211110 122456789999999999999988
Q ss_pred --HHHHHHHhcCCCChHHHHHHhhH---HHHH-HHHHHHHh---cCc-hhHHHHhhhhChHhHHHHHHHHHHH---HHHH
Q 019984 173 --TFQDKLFKGYDMEIHNQIFYTTL---CSCV-LSLSGLIL---EGH-LFLAIDFVYHHLDCFFDVALLSTVA---TTSQ 239 (333)
Q Consensus 173 --~~~~~l~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~---~g~-~~~~~~~~~~~~~~~~~il~l~~~~---~l~~ 239 (333)
...+... ..+.++.....-... ++.. ..+.+... .++ .....++....+..+...+.-.+.+ .+++
T Consensus 196 ~~~~~~~a~-~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~ 274 (345)
T PRK13499 196 GKPMHEAAA-ALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQF 274 (345)
T ss_pred ccchhhhhh-hcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHH
Confidence 4443321 124444322222211 1111 11111111 111 1000011000111133322223333 3444
Q ss_pred HHHHHHHHhhChhHHH----HHHHHHHHHHHHhHhhhccCCCc------ccccchhhhhhhhhhhhhh
Q 019984 240 FFISYTIRTFGALTFA----TIMTTRQLVSIVLSCVWFRHPLS------WEQCIGSIIVFGALYTRSF 297 (333)
Q Consensus 240 ~~~~~~i~~~~alt~s----v~~~l~~v~sills~~~fge~~t------~~~~iG~~lvl~Gv~~~~~ 297 (333)
.++...-.+.|..... +...+--+++.+.++ +++|.=+ ...++|.++++.|..+-.+
T Consensus 275 ~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~ 341 (345)
T PRK13499 275 FFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGL 341 (345)
T ss_pred HHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhh
Confidence 5555555666444333 333556678888888 4999766 4568899998888766544
No 75
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=95.68 E-value=0.03 Score=42.66 Aligned_cols=52 Identities=15% Similarity=0.243 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHhhChhHH-HHHHHHHHHHHHHhHhhhccCCCcccccchhhhh
Q 019984 237 TSQFFISYTIRTFGALTF-ATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIV 288 (333)
Q Consensus 237 l~~~~~~~~i~~~~alt~-sv~~~l~~v~sills~~~fge~~t~~~~iG~~lv 288 (333)
++.++...++|+.+...+ .+..-+-.+.+.++|+++|||++|+.+++|+.++
T Consensus 41 ~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 41 LSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 444566678888776555 5566688899999999999999999999999875
No 76
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.31 E-value=0.47 Score=39.38 Aligned_cols=133 Identities=13% Similarity=0.167 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHH-hcCchhHHHHhhhhChHhHHHHHHHHH
Q 019984 155 VWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLI-LEGHLFLAIDFVYHHLDCFFDVALLST 233 (333)
Q Consensus 155 ~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~il~l~~ 233 (333)
.+..++.+++-++-.+++...-++.+..+ +|.--.+..+..++..+....+ .++... ....... .|+. +.
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~-spl~As~isf~vGt~~L~~l~l~~~~~~~--~a~~~~~--pwW~--~~-- 74 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLG-SPLLASLISFLVGTVLLLILLLIKQGHPG--LAAVASA--PWWA--WI-- 74 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCc--hhhccCC--chHH--HH--
Confidence 34555666666777777777777765444 6777777777777776665533 333321 1221122 2332 11
Q ss_pred HHHHHHHHHHH---HHHhhChhHHHHHHHH-HHHHHHHhHhhhcc----CCCcccccchhhhhhhhhhhhh
Q 019984 234 VATTSQFFISY---TIRTFGALTFATIMTT-RQLVSIVLSCVWFR----HPLSWEQCIGSIIVFGALYTRS 296 (333)
Q Consensus 234 ~~~l~~~~~~~---~i~~~~alt~sv~~~l-~~v~sills~~~fg----e~~t~~~~iG~~lvl~Gv~~~~ 296 (333)
.+.+|..+++. ...+.|+.++...... +-+.++++.-+=+. ++++...++|++++++|+++..
T Consensus 75 GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~ 145 (150)
T COG3238 75 GGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR 145 (150)
T ss_pred ccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence 12334444444 4578888777666555 44567777766333 5789999999999999965543
No 77
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=94.74 E-value=0.4 Score=39.33 Aligned_cols=29 Identities=7% Similarity=0.229 Sum_probs=26.6
Q ss_pred HHHHHHhCcccCchhHHHHHHHHHhhHHh
Q 019984 107 IWGTLIMQKRYKGYDYFLALLVTLGCSIF 135 (333)
Q Consensus 107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~ 135 (333)
++++++++++++..++.++++.++|+.+-
T Consensus 123 ~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y 151 (153)
T PF03151_consen 123 LLSVIFFGEPITPLQIIGIVLALVGVLLY 151 (153)
T ss_pred HHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence 78999999999999999999999998764
No 78
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=94.50 E-value=0.059 Score=50.83 Aligned_cols=81 Identities=4% Similarity=0.101 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhccccCCCCCC
Q 019984 229 ALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPRPS 308 (333)
Q Consensus 229 l~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~~~~~~~~~ 308 (333)
++++..=+++|++...+++.++....++++...-++++.++.++-+|++|+...++.++-++|+.+.+..+.+++...++
T Consensus 163 l~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a 242 (416)
T KOG2765|consen 163 LFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPA 242 (416)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCc
Confidence 33444445667777788999999999999999999999999999999999999999999999999888876666544443
Q ss_pred C
Q 019984 309 E 309 (333)
Q Consensus 309 ~ 309 (333)
+
T Consensus 243 ~ 243 (416)
T KOG2765|consen 243 S 243 (416)
T ss_pred c
Confidence 3
No 79
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=94.21 E-value=0.14 Score=46.49 Aligned_cols=68 Identities=21% Similarity=0.242 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHhhCh-hHHHHHHHHHHHHHHHhHhh-hccCC-----CcccccchhhhhhhhhhhhhhhccccCC
Q 019984 237 TSQFFISYTIRTFGA-LTFATIMTTRQLVSIVLSCV-WFRHP-----LSWEQCIGSIIVFGALYTRSFFKKVSEK 304 (333)
Q Consensus 237 l~~~~~~~~i~~~~a-lt~sv~~~l~~v~sills~~-~fge~-----~t~~~~iG~~lvl~Gv~~~~~~k~~~~~ 304 (333)
.|+.+..-.+++.|- +-..+-++..-+.....|-+ +||.+ -.+.+++|+++++.|..++...|...++
T Consensus 67 ~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~~~ 141 (254)
T PF07857_consen 67 TGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEEKE 141 (254)
T ss_pred cCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCCCC
Confidence 455555555555552 22223333344444444433 56643 3567899999999988888877765543
No 80
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=94.03 E-value=0.032 Score=49.70 Aligned_cols=132 Identities=14% Similarity=0.030 Sum_probs=84.2
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHH
Q 019984 157 GVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVAT 236 (333)
Q Consensus 157 G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~ 236 (333)
+++++++-++.|+....... +.+-+|.++...+.+-+.++.+...++..+. .++..+..-+..+..=.
T Consensus 3 ~~liaL~P~l~WGsip~v~~----k~GG~p~qQ~lGtT~GALifaiiv~~~~~p~--------~T~~~~iv~~isG~~Ws 70 (288)
T COG4975 3 DLLIALLPALGWGSIPLVAN----KFGGKPYQQTLGTTLGALIFAIIVFLFVSPE--------LTLTIFIVGFISGAFWS 70 (288)
T ss_pred hHHHHHHHHHHhcccceeee----ecCCChhHhhhhccHHHHHHHHHHheeecCc--------cchhhHHHHHHhhhHhh
Confidence 34555666667777665543 3455788888888877766665554332211 12222222122234445
Q ss_pred HHHHHHHHHHHhhChhHHHHHHHH-HHHHHHHhHhhhccCCCcccccc----hhhhhhhhhhhhhhhcc
Q 019984 237 TSQFFISYTIRTFGALTFATIMTT-RQLVSIVLSCVWFRHPLSWEQCI----GSIIVFGALYTRSFFKK 300 (333)
Q Consensus 237 l~~~~~~~~i~~~~alt~sv~~~l-~~v~sills~~~fge~~t~~~~i----G~~lvl~Gv~~~~~~k~ 300 (333)
+||...|.+++..|..++..+++- +-+-+.+++++.|||=-+..|.+ ..++++.|+++.++.++
T Consensus 71 ~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~ 139 (288)
T COG4975 71 FGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR 139 (288)
T ss_pred hhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence 789999999998888888777665 55678899999999977766643 44556678887765443
No 81
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=94.03 E-value=0.099 Score=41.23 Aligned_cols=30 Identities=7% Similarity=0.011 Sum_probs=28.1
Q ss_pred HHHHHHhCcccCchhHHHHHHHHHhhHHhh
Q 019984 107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFI 136 (333)
Q Consensus 107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~ 136 (333)
+++++++|||.++++++++.++++|+++..
T Consensus 79 ~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 79 LAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 789999999999999999999999998765
No 82
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=93.96 E-value=0.81 Score=42.21 Aligned_cols=127 Identities=12% Similarity=0.096 Sum_probs=92.2
Q ss_pred hhhHHHHHHHHhc-CC------CChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHHHHHHH
Q 019984 169 GFTSTFQDKLFKG-YD------MEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFF 241 (333)
Q Consensus 169 a~~~~~~~~l~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l~~~~ 241 (333)
-..+++|||+..+ |+ -++.-+.+.+++.+.+.....+-.... ...++..|+...+.++.+.++..+
T Consensus 27 l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~-------~~~~~apl~~y~~is~tn~~s~~~ 99 (327)
T KOG1581|consen 27 LTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKK-------ELSGVAPLYKYSLISFTNTLSSWC 99 (327)
T ss_pred HHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhcccc-------cCCCCCchhHHhHHHHHhhcchHH
Confidence 3457889998754 42 133345555555555544332211110 012344555556668888888889
Q ss_pred HHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhcccc
Q 019984 242 ISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVS 302 (333)
Q Consensus 242 ~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~~~ 302 (333)
.+-++|+.+=-|-.+.-..|-+-.++.+.++.+.+.++...+-..+|-.|+.+..+.+..+
T Consensus 100 ~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~ 160 (327)
T KOG1581|consen 100 GYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSD 160 (327)
T ss_pred HHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCC
Confidence 9999999999999999999999999999999999999999999999999988888876655
No 83
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=93.69 E-value=1 Score=35.48 Aligned_cols=32 Identities=13% Similarity=0.109 Sum_probs=29.8
Q ss_pred HHHHHHhCcccCchhHHHHHHHHHhhHHhhcc
Q 019984 107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 138 (333)
Q Consensus 107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~ 138 (333)
++++++++|+.++.+++++.++++|+++....
T Consensus 73 l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 73 LLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 77999999999999999999999999998765
No 84
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=92.67 E-value=0.15 Score=40.31 Aligned_cols=60 Identities=5% Similarity=0.050 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHhhChhHHHHH-HHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhh
Q 019984 235 ATTSQFFISYTIRTFGALTFATI-MTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYT 294 (333)
Q Consensus 235 ~~l~~~~~~~~i~~~~alt~sv~-~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~ 294 (333)
+-.|...+++.+.+.+-+....+ +.+.=+++.+.++++.+|..+...++|+++++.|+.+
T Consensus 51 Nq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 51 NQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 33455677778888886666655 5788899999998888888899999999999999865
No 85
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.67 E-value=0.79 Score=42.62 Aligned_cols=171 Identities=13% Similarity=0.208 Sum_probs=93.2
Q ss_pred HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcch------HHHHHH---HHHHHHhhhhhHHHHHH
Q 019984 107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENT------VWGVSL---MVGYLGFDGFTSTFQDK 177 (333)
Q Consensus 107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~------~~G~~l---~l~s~~~~a~~~~~~~~ 177 (333)
+++..+++||.++...++..++++|-.+...+.++.+ +. . +... -.|++. .+.-.++ +..-.
T Consensus 106 ila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~-~i-~--t~~el~~~~~~~~Fliy~~~iil~~~-----il~~~ 176 (335)
T KOG2922|consen 106 ILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQ-EI-E--SVEEVWELATEPGFLVYVIIIILIVL-----ILIFF 176 (335)
T ss_pred HHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccc-cc-c--cHHHHHHHhcCccHHHHHHHHHHHHH-----HHhee
Confidence 7888999999999999999999999887777643211 10 0 0000 012211 1111010 11101
Q ss_pred HHhcCCCChHHHHHHhhHHHHHHHHHH-----------HHhcCchhHHHHhhhhChHhHHHHHHHHHHHHHHH-HHHHHH
Q 019984 178 LFKGYDMEIHNQIFYTTLCSCVLSLSG-----------LILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQ-FFISYT 245 (333)
Q Consensus 178 l~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l~~-~~~~~~ 245 (333)
...+++ ..+++-|..+.+.+-.+-. ..+.|.. + ..+|..|..++.+..+ +..| .....+
T Consensus 177 ~~p~~g--~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~----q--l~~~~ty~~~l~~~~~-~~~Q~~yLNkA 247 (335)
T KOG2922|consen 177 YAPRYG--QTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNN----Q--LFYPLTWIFLLVVATC-VSTQMNYLNKA 247 (335)
T ss_pred eccccc--ccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCc----c--cccHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 111233 2345566666655432111 1122211 1 1345444433333333 3445 356668
Q ss_pred HHhhChhHHHHHHHH-HHHHHHHhHhhhccC--CCcccc----cchhhhhhhhhhhh
Q 019984 246 IRTFGALTFATIMTT-RQLVSIVLSCVWFRH--PLSWEQ----CIGSIIVFGALYTR 295 (333)
Q Consensus 246 i~~~~alt~sv~~~l-~~v~sills~~~fge--~~t~~~----~iG~~lvl~Gv~~~ 295 (333)
++.+++...+.+... -..++++.|.++|+| ..+..+ ..|...++.|+++-
T Consensus 248 L~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL 304 (335)
T KOG2922|consen 248 LDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFLL 304 (335)
T ss_pred HHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEe
Confidence 998888777665544 677899999999997 455554 45667777887765
No 86
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=92.20 E-value=2.9 Score=39.39 Aligned_cols=146 Identities=12% Similarity=0.099 Sum_probs=79.2
Q ss_pred cchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHH-hhHHHHHHHHHHH---HhcCchhHHHHhhhhCh-HhHH
Q 019984 152 ENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFY-TTLCSCVLSLSGL---ILEGHLFLAIDFVYHHL-DCFF 226 (333)
Q Consensus 152 ~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~-~~~~ 226 (333)
..-+.|+++..++.++.+...+=.||. |+ .+ +|.+-. ..+++.++ +|.+ +...+.. +.....| ..+.
T Consensus 3 ~~ii~Gii~h~iGg~~~~sfy~P~kkv-k~--Ws-WEs~Wlv~gi~swli-~P~~~a~l~ip~~~---~i~~~~~~~~l~ 74 (344)
T PF06379_consen 3 SAIILGIIFHAIGGFASGSFYVPFKKV-KG--WS-WESYWLVQGIFSWLI-VPWLWALLAIPDFF---SIYSATPASTLF 74 (344)
T ss_pred chHHHHHHHHHHHHHHhhhhccchhhc-CC--cc-HHHHHHHHHHHHHHH-HHHHHHHHhCCcHH---HHHHhCChhHHH
Confidence 346789999988888888877777664 32 23 443333 34444433 3432 1222322 2222333 3343
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCh-hHHHHHHHHHHHHHHHhHhhhc-------cCCCcccccchhhhhhhhhhhhhhh
Q 019984 227 DVALLSTVATTSQFFISYTIRTFGA-LTFATIMTTRQLVSIVLSCVWF-------RHPLSWEQCIGSIIVFGALYTRSFF 298 (333)
Q Consensus 227 ~il~l~~~~~l~~~~~~~~i~~~~a-lt~sv~~~l~~v~sills~~~f-------ge~~t~~~~iG~~lvl~Gv~~~~~~ 298 (333)
...++++.=-+|.+.+-.++++.|- +..++..-+--++..++--++. +.+-...-++|.++++.|+.+..+.
T Consensus 75 ~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A 154 (344)
T PF06379_consen 75 WTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA 154 (344)
T ss_pred HHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence 4444444433555555556777663 3344444444444444433332 2333446788999999999988877
Q ss_pred ccccCCC
Q 019984 299 KKVSEKP 305 (333)
Q Consensus 299 k~~~~~~ 305 (333)
-.+|+|.
T Consensus 155 G~~Ke~~ 161 (344)
T PF06379_consen 155 GSMKEKE 161 (344)
T ss_pred HHhhhhh
Confidence 5555443
No 87
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=91.30 E-value=0.37 Score=45.09 Aligned_cols=129 Identities=9% Similarity=-0.002 Sum_probs=80.5
Q ss_pred HHHhhhhhHHHHHHHHhcCC-CChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHHHHHHHH
Q 019984 164 YLGFDGFTSTFQDKLFKGYD-MEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFI 242 (333)
Q Consensus 164 s~~~~a~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l~~~~~ 242 (333)
.-++....+++.|+++++++ ..|..+.......+.+..... -..+..+. ... ..+..|..++-+++...++..+-
T Consensus 25 w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~-~~l~~~~~-~~~--~~~~~~~~llpl~~~~~~~~v~~ 100 (316)
T KOG1441|consen 25 WYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVI-KVLKLVPP-SKI--SSKLPLRTLLPLGLVFCISHVLG 100 (316)
T ss_pred HhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHH-HHhcCCCC-Ccc--ccccchHHHHHHHHHHHHHHHhc
Confidence 33444455667788887543 234444444333333322222 11111110 000 12345666777788777888888
Q ss_pred HHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhh
Q 019984 243 SYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS 296 (333)
Q Consensus 243 ~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~ 296 (333)
.-.+++.+-....++..+.|++++++++++.+|+.+...+.....+..|+.+.+
T Consensus 101 n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias 154 (316)
T KOG1441|consen 101 NVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIAS 154 (316)
T ss_pred chhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEee
Confidence 888999999999999999999999999999999988766655555555544433
No 88
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=91.22 E-value=3.9 Score=32.11 Aligned_cols=29 Identities=14% Similarity=0.251 Sum_probs=27.2
Q ss_pred HHHHHHhCcccCchhHHHHHHHHHhhHHh
Q 019984 107 IWGTLIMQKRYKGYDYFLALLVTLGCSIF 135 (333)
Q Consensus 107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~ 135 (333)
+.+++++||+.++.+++++.++++|++..
T Consensus 78 ~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 78 AAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 77899999999999999999999999875
No 89
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=90.95 E-value=1.7 Score=33.90 Aligned_cols=32 Identities=16% Similarity=0.101 Sum_probs=29.3
Q ss_pred HHHHHHhCcccCchhHHHHHHHHHhhHHhhcc
Q 019984 107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 138 (333)
Q Consensus 107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~ 138 (333)
+.+++++||+.+..+++++.++++|++..-..
T Consensus 73 l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 73 LVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 78999999999999999999999999987554
No 90
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=90.03 E-value=0.48 Score=37.91 Aligned_cols=33 Identities=6% Similarity=0.018 Sum_probs=30.0
Q ss_pred HHHHHHhCcccCchhHHHHHHHHHhhHHhhccC
Q 019984 107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFP 139 (333)
Q Consensus 107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~ 139 (333)
++++++++|+.++.+++++.++++|++.....+
T Consensus 73 ~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 73 LFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 678999999999999999999999999887653
No 91
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=89.67 E-value=0.11 Score=46.39 Aligned_cols=174 Identities=9% Similarity=0.099 Sum_probs=104.1
Q ss_pred HHHHHHhCcccCchhH----HHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcC
Q 019984 107 IWGTLIMQKRYKGYDY----FLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGY 182 (333)
Q Consensus 107 ll~~l~~~~k~s~~~~----l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~ 182 (333)
+++.+.++|-.+..+. .++++++.|+.+.+..+.+ +. ..++.++.-.|+...+.|.+-+-.|.+..+. .
T Consensus 102 L~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~-nk--~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~----f 174 (288)
T COG4975 102 LFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRN-NK--EEENPSNLKKGIVILLISTLGYVGYVVLFQL----F 174 (288)
T ss_pred eeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccc-cc--cccChHhhhhheeeeeeeccceeeeEeeecc----c
Confidence 7778888888777764 4778888999887776421 11 1122345567888777777776666655432 3
Q ss_pred CCChHHHHHHhhHHHHHHHHHHH-HhcCchhHHHHhhhhChHhHHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHH
Q 019984 183 DMEIHNQIFYTTLCSCVLSLSGL-ILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTR 261 (333)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~ 261 (333)
+.+.+....-+. +++++..... ....+. . .+...|.. ..-++.=..|+++.+.+-++.|-.|.=..+-+-
T Consensus 175 ~v~g~saiLPqA-iGMv~~ali~~~~~~~~----~---~~K~t~~n-ii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlg 245 (288)
T COG4975 175 DVDGLSAILPQA-IGMVIGALILGFFKMEK----R---FNKYTWLN-IIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLG 245 (288)
T ss_pred cccchhhhhHHH-HHHHHHHHHHhhccccc----c---hHHHHHHH-HhhHHHHHhhHHHHHHhhhhhceeeeeeHhhhe
Confidence 445444443332 2333222221 111111 0 12223332 122444457888888887777766655556666
Q ss_pred HHHHHHhHhhhccCCCccccc----chhhhhhhhhhhhh
Q 019984 262 QLVSIVLSCVWFRHPLSWEQC----IGSIIVFGALYTRS 296 (333)
Q Consensus 262 ~v~sills~~~fge~~t~~~~----iG~~lvl~Gv~~~~ 296 (333)
-+.+.+-++++++|+-|..++ +|+.+++.|..+-.
T Consensus 246 ViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg 284 (288)
T COG4975 246 VIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLG 284 (288)
T ss_pred eeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhh
Confidence 778999999999999998874 57777776654443
No 92
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=88.64 E-value=3.3 Score=33.89 Aligned_cols=81 Identities=14% Similarity=0.094 Sum_probs=49.9
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHHhcCC---CCCCCchhhHH--HHHHHHHhhhhhhHH----------------HHHHH-
Q 019984 54 YSLFLVFCNRLMTSAVSAGTLIASRKA---IDPVAPVYKYC--LVSMSNILTTTCQYE----------------IWGTL- 111 (333)
Q Consensus 54 ~p~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~y~--~~s~~~~~a~~~~~~----------------ll~~l- 111 (333)
.|+.-+++....+.+...+.....+++ ..++.|++.|. +.+...+..+....| +.+.+
T Consensus 29 s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~lGG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~i 108 (138)
T PF04657_consen 29 SPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAYLGGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLI 108 (138)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHhccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 578888888888888887766655432 12356888774 233332222211111 12222
Q ss_pred -------HhCcccCchhHHHHHHHHHhhHH
Q 019984 112 -------IMQKRYKGYDYFLALLVTLGCSI 134 (333)
Q Consensus 112 -------~~~~k~s~~~~l~vlli~~Gv~l 134 (333)
.-|++.+++++++++++++|+.+
T Consensus 109 D~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 109 DHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 24689999999999999999863
No 93
>PRK11431 multidrug efflux system protein; Provisional
Probab=86.39 E-value=0.96 Score=35.28 Aligned_cols=32 Identities=16% Similarity=0.121 Sum_probs=29.0
Q ss_pred HHHHHHhCcccCchhHHHHHHHHHhhHHhhcc
Q 019984 107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 138 (333)
Q Consensus 107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~ 138 (333)
+.+++++||+.++.+++++.++++|++.....
T Consensus 72 lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~ 103 (105)
T PRK11431 72 ITGIVLLGESASPARLLSLALIVAGIIGLKLS 103 (105)
T ss_pred HHHHHHhCCCCCHHHHHHHHHHHHHHHhhhcc
Confidence 78999999999999999999999999987543
No 94
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=86.18 E-value=1.1 Score=40.96 Aligned_cols=67 Identities=10% Similarity=0.121 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhh
Q 019984 232 STVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF 298 (333)
Q Consensus 232 ~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~ 298 (333)
++|-..|....+-.+..++|+...+.--..-+++-++|..+++++++..||+|+..+..|+......
T Consensus 93 al~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~ 159 (372)
T KOG3912|consen 93 ALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL 159 (372)
T ss_pred HHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence 4555555566666777888888877777777899999999999999999999999999997665443
No 95
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=86.18 E-value=0.38 Score=43.34 Aligned_cols=137 Identities=14% Similarity=0.131 Sum_probs=85.4
Q ss_pred cchHHHHHH-HHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHH
Q 019984 152 ENTVWGVSL-MVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVAL 230 (333)
Q Consensus 152 ~~~~~G~~l-~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~ 230 (333)
...++|+.+ .++|+++.+....-++-..+.-+. |..+.|.....=++.-.|.+.+...... .-|..-++
T Consensus 14 kk~li~~~LGQiLSL~~t~~a~tss~la~k~iN~-Pt~QtFl~Y~LLalVY~~~~~fR~~~~~---------~~~~hYil 83 (336)
T KOG2766|consen 14 KKTLIGLGLGQILSLLITSTAFTSSELARKGINA-PTSQTFLNYVLLALVYGPIMLFRRKYIK---------AKWRHYIL 83 (336)
T ss_pred hhhhheeeHHHHHHHHHHcchhhhHHHHhccCCC-ccHHHHHHHHHHHHHHhhHHHhhhHHHH---------HHHHHhhh
Confidence 456777766 466666655544444433332222 2223332222212222233222221111 13444445
Q ss_pred HHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhh
Q 019984 231 LSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF 298 (333)
Q Consensus 231 l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~ 298 (333)
+++.-+=+++++..+.++++-+...+...--.....+++|++++.+-.+.++.|.+++++|+......
T Consensus 84 la~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~s 151 (336)
T KOG2766|consen 84 LAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFS 151 (336)
T ss_pred eeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEe
Confidence 56666667777777888888888888888888899999999999999999999999999997665543
No 96
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=85.25 E-value=0.56 Score=40.62 Aligned_cols=62 Identities=8% Similarity=0.218 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhh
Q 019984 237 TSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF 298 (333)
Q Consensus 237 l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~ 298 (333)
..++.+..++++.+|+.++-+....+.+.-+++++++|+++.-..++...+.++|++.-.+.
T Consensus 65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~ 126 (290)
T KOG4314|consen 65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYA 126 (290)
T ss_pred cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEec
Confidence 34567777899999999999999999999999999999999999999999999998776554
No 97
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=83.89 E-value=10 Score=31.57 Aligned_cols=84 Identities=12% Similarity=0.053 Sum_probs=49.3
Q ss_pred eehHHHHHHHHHHHHHHHHHHHHHhcCCC----CCCCchhhHHH--HHHHHHhhhhhhHH--------------------
Q 019984 53 KYSLFLVFCNRLMTSAVSAGTLIASRKAI----DPVAPVYKYCL--VSMSNILTTTCQYE-------------------- 106 (333)
Q Consensus 53 ~~p~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~y~~--~s~~~~~a~~~~~~-------------------- 106 (333)
..|..-.+....+++++..++.....++. .++.||+.|.. .+...+.++...+|
T Consensus 32 ~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~gl 111 (150)
T COG3238 32 GSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGL 111 (150)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHH
Confidence 37888888888888877666554432221 35678888742 22211111111111
Q ss_pred ---HHHHH-HhCcccCchhHHHHHHHHHhhHHhh
Q 019984 107 ---IWGTL-IMQKRYKGYDYFLALLVTLGCSIFI 136 (333)
Q Consensus 107 ---ll~~l-~~~~k~s~~~~l~vlli~~Gv~l~~ 136 (333)
.++++ .-++++++.++++++++.+|+.++.
T Consensus 112 liD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~ 145 (150)
T COG3238 112 LIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR 145 (150)
T ss_pred HHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence 22222 2268899999999999999955543
No 98
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=83.26 E-value=2 Score=38.27 Aligned_cols=63 Identities=5% Similarity=0.079 Sum_probs=52.2
Q ss_pred HHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhcccc
Q 019984 240 FFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVS 302 (333)
Q Consensus 240 ~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~~~ 302 (333)
.....+++..+=-|..+--..||+-.+++++++.++.-+|....-..++..|+.+..+..+|.
T Consensus 100 VssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv 162 (337)
T KOG1580|consen 100 VSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKV 162 (337)
T ss_pred HhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhcccccc
Confidence 455567777777777788889999999999999999999999999999999998877644333
No 99
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=82.96 E-value=1.8 Score=34.99 Aligned_cols=28 Identities=11% Similarity=0.032 Sum_probs=25.5
Q ss_pred HHhCcccCchhHHHHHHHHHhhHHhhcc
Q 019984 111 LIMQKRYKGYDYFLALLVTLGCSIFILF 138 (333)
Q Consensus 111 l~~~~k~s~~~~l~vlli~~Gv~l~~~~ 138 (333)
++++|+.++.++++++++++|+.+...+
T Consensus 96 ~~~~E~ls~~~~iGi~lIi~GV~lv~~~ 123 (129)
T PRK02971 96 PWFNETFSLKKTLGVACIMLGVWLINLP 123 (129)
T ss_pred HHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 4899999999999999999999998754
No 100
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=75.24 E-value=1.1 Score=41.68 Aligned_cols=118 Identities=12% Similarity=0.128 Sum_probs=74.8
Q ss_pred cchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHH-HHH
Q 019984 152 ENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFD-VAL 230 (333)
Q Consensus 152 ~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-il~ 230 (333)
.++..|.++.+.+.++-+..-+.+|+-.+|.+..... --+|+. .+. .+ +.||. ++.
T Consensus 17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~~r-----------------a~~gg~----~yl-~~-~~Ww~G~lt 73 (335)
T KOG2922|consen 17 SDNIIGLVLAISSSIFIGSSFILKKKGLKRAGASGLR-----------------AGEGGY----GYL-KE-PLWWAGMLT 73 (335)
T ss_pred cCceeeeeehhhccEEEeeehhhhHHHHHHHhhhccc-----------------ccCCCc----chh-hh-HHHHHHHHH
Confidence 4567899998888888788778887765543210000 011111 111 12 23332 222
Q ss_pred HHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhh
Q 019984 231 LSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS 296 (333)
Q Consensus 231 l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~ 296 (333)
+ .+|...-|.+..--++.-.+..+.+.-+.+.+++.++++|++++...+|.++++.|-.+-.
T Consensus 74 m----~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV 135 (335)
T KOG2922|consen 74 M----IVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIV 135 (335)
T ss_pred H----HHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEE
Confidence 2 2344444444455577777778888889999999999999999999999999998844433
No 101
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=72.92 E-value=20 Score=27.76 Aligned_cols=33 Identities=21% Similarity=0.400 Sum_probs=28.4
Q ss_pred HHHHHHhCcccCchhHHHHHHHHHhhHHhhccC
Q 019984 107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFP 139 (333)
Q Consensus 107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~ 139 (333)
+..++.-|+|+++.++.+..++++|+.++.+++
T Consensus 74 ~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~p 106 (109)
T COG1742 74 AWLWVVDGVRPDRYDWIGAAICLAGVAVILFGP 106 (109)
T ss_pred HHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCC
Confidence 556777899999999999999999988887763
No 102
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=71.35 E-value=4.4 Score=37.56 Aligned_cols=64 Identities=11% Similarity=0.043 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhh---hccCCCc--ccccchhhhhhhhhhhhhhh
Q 019984 232 STVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCV---WFRHPLS--WEQCIGSIIVFGALYTRSFF 298 (333)
Q Consensus 232 ~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~---~fge~~t--~~~~iG~~lvl~Gv~~~~~~ 298 (333)
++.--+++++.-+++...|-..+-+++. -+++++++. +...+.+ ..-+.|.++++..+.+....
T Consensus 79 GvvfnlgNillq~aia~aGmSVafpvg~---glalVlGv~~NYfld~~~n~a~iLF~GV~cf~iAI~lga~a 147 (336)
T PF07168_consen 79 GVVFNLGNILLQAAIAFAGMSVAFPVGI---GLALVLGVTLNYFLDPKINRAEILFPGVACFLIAIILGAAA 147 (336)
T ss_pred hHhhhhHHHHHHHHHHHhcceeeeeeec---ceEEEEeeeeeeeccCCCCCceEEEccHHHHHHHHHHHHHH
Confidence 3443467777777776666543333321 133344443 2344554 24455777777666655543
No 103
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=67.43 E-value=85 Score=29.38 Aligned_cols=129 Identities=12% Similarity=0.136 Sum_probs=76.5
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHhcCCCCh-HHHHHHhhHHHHHHHHHHH---HhcCchhHHHHhhhhChHhHHHHHHHHH
Q 019984 158 VSLMVGYLGFDGFTSTFQDKLFKGYDMEI-HNQIFYTTLCSCVLSLSGL---ILEGHLFLAIDFVYHHLDCFFDVALLST 233 (333)
Q Consensus 158 ~~l~l~s~~~~a~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~il~l~~ 233 (333)
....+..++++.+..+..|.....|+.+. .-++.++++.+.+.....- +.+.+ .+++ +.++-|..+-++
T Consensus 14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~---~l~~--~~~kk~~P~~~l-- 86 (314)
T KOG1444|consen 14 LLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFR---PLDL--RTAKKWFPVSLL-- 86 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecC---CcCh--HHHHHHccHHHH--
Confidence 44444455555555666777777776433 3455577776654433221 11111 0111 233334322111
Q ss_pred HHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhh
Q 019984 234 VATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYT 294 (333)
Q Consensus 234 ~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~ 294 (333)
-+...+.-...+++.+--...+.-...++++.+.-.++||..++..-|.......+|-..
T Consensus 87 -f~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~ 146 (314)
T KOG1444|consen 87 -FVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVA 146 (314)
T ss_pred -HHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHh
Confidence 111112333467888888889999999999999999999999999988888887776443
No 104
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=64.52 E-value=54 Score=28.60 Aligned_cols=28 Identities=18% Similarity=0.218 Sum_probs=25.0
Q ss_pred HHHHHHhCcccCchhHHHHHHHHHhhHH
Q 019984 107 IWGTLIMQKRYKGYDYFLALLVTLGCSI 134 (333)
Q Consensus 107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l 134 (333)
+++.++++++++..++++..++..|+.+
T Consensus 194 lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 194 LASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 7888999999999999999999988653
No 105
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=63.70 E-value=4.1 Score=31.56 Aligned_cols=29 Identities=24% Similarity=0.574 Sum_probs=25.2
Q ss_pred HHhHhhhccCCCcccccchhhhhhhhhhh
Q 019984 266 IVLSCVWFRHPLSWEQCIGSIIVFGALYT 294 (333)
Q Consensus 266 ills~~~fge~~t~~~~iG~~lvl~Gv~~ 294 (333)
..+|+++++|++++.+..|.+++++++++
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 46788999999999999999999888654
No 106
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=63.02 E-value=35 Score=25.67 Aligned_cols=64 Identities=8% Similarity=0.074 Sum_probs=47.4
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhccccccCCCCCCceeehHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 019984 17 LKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAID 82 (333)
Q Consensus 17 ~~~~~~~~gi~~~~~~~~~~qe~i~~~~~~~~~~~f~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~ 82 (333)
+.+...+.+.|.+|..-..+...++.++-. +| ..+..+.+...|.+++.+++.++....+++.+
T Consensus 19 ~~l~~i~l~~y~~~~ll~a~~p~~m~~~v~-~G-~~t~g~~~g~~~~~~~~~l~~~Yv~~An~~~D 82 (91)
T PF04341_consen 19 WPLSAIFLVLYFGFVLLSAFAPELMATPVF-PG-SLTLGIVLGLGQIVFAWVLTWLYVRRANREFD 82 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHCHHHHcCccc-CC-CcCHHHHHHHHHHHHHHHHHHHHHHHHccccC
Confidence 556777888899998888888666666543 23 57888889999999999888887665544333
No 107
>PRK02237 hypothetical protein; Provisional
Probab=62.46 E-value=67 Score=25.09 Aligned_cols=48 Identities=13% Similarity=-0.042 Sum_probs=39.6
Q ss_pred hHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhc
Q 019984 252 LTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFK 299 (333)
Q Consensus 252 lt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k 299 (333)
-..+..+-.--+.+++..+.+-|++++..-++|.++++.|+.+-.+.+
T Consensus 60 RvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 60 RVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred hHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 345666777778899999999999999999999999999976655544
No 108
>PRK02237 hypothetical protein; Provisional
Probab=61.63 E-value=10 Score=29.58 Aligned_cols=32 Identities=16% Similarity=0.361 Sum_probs=28.7
Q ss_pred HHHHHHhCcccCchhHHHHHHHHHhhHHhhcc
Q 019984 107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 138 (333)
Q Consensus 107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~ 138 (333)
+..+.+-|+|+++.++++..++.+|+.++.+.
T Consensus 75 ~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 75 LWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred HHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 56788889999999999999999999988766
No 109
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=61.24 E-value=77 Score=24.71 Aligned_cols=32 Identities=25% Similarity=0.540 Sum_probs=28.9
Q ss_pred HHHHHHhCcccCchhHHHHHHHHHhhHHhhcc
Q 019984 107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 138 (333)
Q Consensus 107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~ 138 (333)
+.++.+-|+|+++.++++..++++|+.+..+.
T Consensus 73 ~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 73 LWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred HHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 56778889999999999999999999988776
No 110
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=61.00 E-value=13 Score=29.27 Aligned_cols=29 Identities=14% Similarity=0.201 Sum_probs=24.8
Q ss_pred HHHHHHhCcccCchhHHHHHHHHHhhHHh
Q 019984 107 IWGTLIMQKRYKGYDYFLALLVTLGCSIF 135 (333)
Q Consensus 107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~ 135 (333)
+.++++.+|..+++.+++++++++|+.++
T Consensus 84 l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 84 LTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 67777777888888999999999998764
No 111
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=58.96 E-value=5.8 Score=30.28 Aligned_cols=29 Identities=24% Similarity=0.702 Sum_probs=25.9
Q ss_pred HHhHhhhccCCCcccccchhhhhhhhhhh
Q 019984 266 IVLSCVWFRHPLSWEQCIGSIIVFGALYT 294 (333)
Q Consensus 266 ills~~~fge~~t~~~~iG~~lvl~Gv~~ 294 (333)
..+|++.++||+.+.++.|.+++.+|+++
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~f 112 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYF 112 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHH
Confidence 45799999999999999999999998765
No 112
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=55.90 E-value=52 Score=25.63 Aligned_cols=47 Identities=13% Similarity=0.008 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhc
Q 019984 253 TFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFK 299 (333)
Q Consensus 253 t~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k 299 (333)
..+..+-.--+.+++..+.+-|++++..-++|.++++.|+.+-.+.+
T Consensus 59 vYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 59 VYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred HHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 35566666678899999999999999999999999999977655544
No 113
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=55.20 E-value=11 Score=26.63 Aligned_cols=25 Identities=12% Similarity=0.109 Sum_probs=14.3
Q ss_pred cchhhhhhhhhhhhhhh-ccccCCCC
Q 019984 282 CIGSIIVFGALYTRSFF-KKVSEKPR 306 (333)
Q Consensus 282 ~iG~~lvl~Gv~~~~~~-k~~~~~~~ 306 (333)
++++.+++.|+.+|... |++..+.+
T Consensus 7 Li~ICVaii~lIlY~iYnr~~~~q~~ 32 (68)
T PF05961_consen 7 LIIICVAIIGLILYGIYNRKKTTQNT 32 (68)
T ss_pred HHHHHHHHHHHHHHHHHhcccccCCC
Confidence 46677777776666554 44444433
No 114
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=54.86 E-value=16 Score=27.47 Aligned_cols=22 Identities=9% Similarity=0.143 Sum_probs=11.6
Q ss_pred HHHHHHhCcccCchhHHHHHHH
Q 019984 107 IWGTLIMQKRYKGYDYFLALLV 128 (333)
Q Consensus 107 ll~~l~~~~k~s~~~~l~vlli 128 (333)
+.+.+++||+.++.|++++.++
T Consensus 72 ~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 72 LVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHH--------HHHHHHH
T ss_pred HHHHHHhCCCCCHHHHhheeeC
Confidence 7789999999999999998764
No 115
>PF12606 RELT: Tumour necrosis factor receptor superfamily member 19; InterPro: IPR022248 The members of tumor necrosis factor receptor (TNFR) superfamily have been designated as the "guardians of the immune system" due to their roles in immune cell proliferation, differentiation, activation, and death (apoptosis). RELT (receptor expressed in lymphoid tissues) is a member of the TNFR superfamily. The messenger RNA of RELT is especially abundant in hematologic tissues such as spleen, lymph node, and peripheral blood leukocytes as well as in leukemias and lymphomas. RELT is able to activate the NF-kappaB pathway and selectively binds tumor necrosis factor receptor-associated factor 1 []. RELT like proteins 1 and 2 (RELL1 and RELL2) are two RELT homologues that bind to RELT. The expression of RELL1 at the mRNA level is ubiquitous, whereas expression of RELL2 mRNA is more restricted to particular tissues [].
Probab=53.17 E-value=15 Score=24.54 Aligned_cols=32 Identities=19% Similarity=0.056 Sum_probs=20.2
Q ss_pred chhhhhh--hhhhhhhhhccccCCCCCCCCCCcc
Q 019984 283 IGSIIVF--GALYTRSFFKKVSEKPRPSEHPMEN 314 (333)
Q Consensus 283 iG~~lvl--~Gv~~~~~~k~~~~~~~~~~~~~~~ 314 (333)
+++.+++ .|+.+....|++..+++.++.+.|.
T Consensus 7 V~i~iv~~lLg~~I~~~~K~ygYkht~d~~e~~~ 40 (50)
T PF12606_consen 7 VSIFIVMGLLGLSICTTLKAYGYKHTVDPLEDEP 40 (50)
T ss_pred HHHHHHHHHHHHHHHHHhhccccccccCCCCCCc
Confidence 3444443 4777777788888887776644433
No 116
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=51.58 E-value=76 Score=31.48 Aligned_cols=24 Identities=13% Similarity=0.189 Sum_probs=19.4
Q ss_pred Ccccccchhhhhhhhhhhhhhhcc
Q 019984 277 LSWEQCIGSIIVFGALYTRSFFKK 300 (333)
Q Consensus 277 ~t~~~~iG~~lvl~Gv~~~~~~k~ 300 (333)
++..||+++.++++|+.+..+.++
T Consensus 254 l~~~Q~lSl~~il~gl~~~~~~~~ 277 (460)
T PRK13108 254 IRINSFTSTFVFIGAVVYIILAPK 277 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhc
Confidence 788999999999999877665544
No 117
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=44.53 E-value=1.3e+02 Score=27.78 Aligned_cols=33 Identities=21% Similarity=0.302 Sum_probs=30.0
Q ss_pred HHHHHHhCcccCchhHHHHHHHHHhhHHhhccC
Q 019984 107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFP 139 (333)
Q Consensus 107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~ 139 (333)
+++++++-|.++..-..+.++++.|+.+=.+++
T Consensus 302 ~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 302 LLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 889999999999999999999999999887774
No 118
>PF06946 Phage_holin_5: Phage holin; InterPro: IPR009708 This entry represents the Bacteriophage A118, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=43.94 E-value=1.1e+02 Score=23.24 Aligned_cols=63 Identities=16% Similarity=0.078 Sum_probs=31.3
Q ss_pred HHHHHhhChhHHHHHHHHHHHHHHHhHhh---hccC-CCcccccchhhhhhhhhhhhhhhccccCCC
Q 019984 243 SYTIRTFGALTFATIMTTRQLVSIVLSCV---WFRH-PLSWEQCIGSIIVFGALYTRSFFKKVSEKP 305 (333)
Q Consensus 243 ~~~i~~~~alt~sv~~~l~~v~sills~~---~fge-~~t~~~~iG~~lvl~Gv~~~~~~k~~~~~~ 305 (333)
...++++.-...-.+-.+.-+..++++++ +.++ ++-..-|.|...-+++-.++....+|++|+
T Consensus 22 Vq~IkkT~~v~~K~iPlIs~viGilLG~~~~~~~~~~~l~~~~~aG~laGlAaTGL~e~~t~r~~~~ 88 (93)
T PF06946_consen 22 VQAIKKTKVVPNKWIPLISVVIGILLGAAAYPLTGDGNLALMAWAGGLAGLAATGLFEQFTNRSKKY 88 (93)
T ss_pred HHHHHHhccCCcchhhHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHhhhhhhhHHHHHHhhhhhc
Confidence 44556555333333444444455555444 2332 233334778776676666655555554443
No 119
>PRK10921 twin-arginine protein translocation system subunit TatC; Provisional
Probab=43.74 E-value=2.3e+02 Score=25.79 Aligned_cols=32 Identities=16% Similarity=0.134 Sum_probs=20.3
Q ss_pred HHHHHHhhChhHHHHHHHHHHHH---HHHhHhhhc
Q 019984 242 ISYTIRTFGALTFATIMTTRQLV---SIVLSCVWF 273 (333)
Q Consensus 242 ~~~~i~~~~alt~sv~~~l~~v~---sills~~~f 273 (333)
+...+.+.|-++......-|+.. ..++|.++=
T Consensus 174 i~~~L~~~giv~~~~l~~~Rr~~~v~~~iiaAiiT 208 (258)
T PRK10921 174 AIVLLCWMGVTTPEDLRKKRPYVLVGAFVVGMLLT 208 (258)
T ss_pred HHHHHHHcCCCCHHHHHhcCcHHhHHHHHHHHHcC
Confidence 33456778888887777777765 344455444
No 120
>PF04277 OAD_gamma: Oxaloacetate decarboxylase, gamma chain ; InterPro: IPR005899 This family comprises distantly related, low complexity, hydrophobic small subunits of several related sodium ion-pumping decarboxylases. These include oxaloacetate decarboxylase gamma subunit and methylmalonyl-CoA decarboxylase delta subunit [].; GO: 0008948 oxaloacetate decarboxylase activity, 0015081 sodium ion transmembrane transporter activity, 0071436 sodium ion export, 0016020 membrane
Probab=42.29 E-value=24 Score=25.52 Aligned_cols=9 Identities=56% Similarity=0.505 Sum_probs=4.0
Q ss_pred cchhhhhhh
Q 019984 282 CIGSIIVFG 290 (333)
Q Consensus 282 ~iG~~lvl~ 290 (333)
++|+.+||.
T Consensus 9 i~Gm~iVF~ 17 (79)
T PF04277_consen 9 IIGMGIVFL 17 (79)
T ss_pred HHHHHHHHH
Confidence 344444443
No 121
>PF15471 TMEM171: Transmembrane protein family 171
Probab=42.12 E-value=15 Score=33.34 Aligned_cols=38 Identities=18% Similarity=0.089 Sum_probs=26.1
Q ss_pred ccccchhhhhhhhhhhhhhhccccCCCCC-CCCCCcccc
Q 019984 279 WEQCIGSIIVFGALYTRSFFKKVSEKPRP-SEHPMENMH 316 (333)
Q Consensus 279 ~~~~iG~~lvl~Gv~~~~~~k~~~~~~~~-~~~~~~~~~ 316 (333)
..|++|-++|+.|+-+.....-|||+... .++..|.||
T Consensus 161 slQImGPlIVl~GLCFFVVAHvKKr~nln~~qd~se~Ee 199 (319)
T PF15471_consen 161 SLQIMGPLIVLVGLCFFVVAHVKKRNNLNGSQDASESEE 199 (319)
T ss_pred ehhhhhhHHHHHhhhhhheeeeeeccCCCcccCcccccc
Confidence 56899999999999888877666664333 344444433
No 122
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=39.98 E-value=3.4e+02 Score=25.85 Aligned_cols=59 Identities=12% Similarity=-0.137 Sum_probs=38.3
Q ss_pred CchhHHHHHHHHHhhHHhhccCCCCCCCCCCCC-CcchHHHHHHHHHHHHhhhhhHHHHH
Q 019984 118 KGYDYFLALLVTLGCSIFILFPSGADLSPYSKG-RENTVWGVSLMVGYLGFDGFTSTFQD 176 (333)
Q Consensus 118 s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~-~~~~~~G~~l~l~s~~~~a~~~~~~~ 176 (333)
.....++++++++|+++....+..+|.+...+. +.+.-.|+++++++-+++|..+.-.+
T Consensus 134 g~~vL~Gv~v~LiGIai~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ 193 (344)
T PF06379_consen 134 GQIVLLGVAVCLIGIAICGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLD 193 (344)
T ss_pred chhhhhHHHHHHHHHHHHhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 446788999999999998776432232111111 23345699988888888777765543
No 123
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=39.09 E-value=2.6e+02 Score=24.25 Aligned_cols=24 Identities=13% Similarity=0.261 Sum_probs=15.2
Q ss_pred ChHHHHHHhhHHHHHHHHHHHHhc
Q 019984 185 EIHNQIFYTTLCSCVLSLSGLILE 208 (333)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~ 208 (333)
...+.+-|...+..++.+..++..
T Consensus 55 a~~qIiVYvGAI~VLflFvIMll~ 78 (198)
T PRK06638 55 GVVQIIVYVGAVMVLFLFVVMMLD 78 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcC
Confidence 356777787777766666555443
No 124
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=38.98 E-value=1.5e+02 Score=23.08 Aligned_cols=27 Identities=7% Similarity=-0.017 Sum_probs=20.8
Q ss_pred HHHHHHhCcccCchhHHHHHHHHHhhH
Q 019984 107 IWGTLIMQKRYKGYDYFLALLVTLGCS 133 (333)
Q Consensus 107 ll~~l~~~~k~s~~~~l~vlli~~Gv~ 133 (333)
.++.+++||+++|....+-+++++++.
T Consensus 78 ~Fsv~~l~E~l~~n~l~af~~i~~av~ 104 (108)
T PF04342_consen 78 PFSVFYLGEPLKWNYLWAFLCILGAVY 104 (108)
T ss_pred HHHHHHhCCCccHHHHHHHHHHHHhhh
Confidence 677788888888888888777766644
No 125
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=37.76 E-value=38 Score=27.41 Aligned_cols=9 Identities=11% Similarity=0.416 Sum_probs=3.8
Q ss_pred hhhhhhhhh
Q 019984 284 GSIIVFGAL 292 (333)
Q Consensus 284 G~~lvl~Gv 292 (333)
|..+.+.|+
T Consensus 92 g~~~~~~G~ 100 (136)
T PF08507_consen 92 GLLLFLVGV 100 (136)
T ss_pred HHHHHHHHH
Confidence 334444443
No 126
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=36.94 E-value=59 Score=24.65 Aligned_cols=44 Identities=20% Similarity=0.441 Sum_probs=28.7
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhhhccccccCCCCCCceeehHHHHHHHHHHHHHHHH
Q 019984 14 SRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSA 71 (333)
Q Consensus 14 ~~~~~~~~~~~gi~~~~~~~~~~qe~i~~~~~~~~~~~f~~p~~l~~~~~~~~~~~~~ 71 (333)
.++-|+++.++||.+| +||+.|+.+- ...+....-+++++++.+
T Consensus 25 Er~~q~ilti~aiVg~--i~Gf~~Qqls------------~tvy~vg~~~v~t~li~L 68 (101)
T KOG4112|consen 25 ERFQQLILTIGAIVGF--IYGFAQQQLS------------VTVYIVGAGFVFTLLITL 68 (101)
T ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHHH------------HHHHHHHHHHHHHHHhcC
Confidence 4578899999998887 5777676664 444555555555554443
No 127
>PHA03049 IMV membrane protein; Provisional
Probab=36.83 E-value=30 Score=24.36 Aligned_cols=36 Identities=19% Similarity=0.319 Sum_probs=19.2
Q ss_pred cchhhhhhhhhhhhhhh-ccccCCCCCC-CCCCccccc
Q 019984 282 CIGSIIVFGALYTRSFF-KKVSEKPRPS-EHPMENMHN 317 (333)
Q Consensus 282 ~iG~~lvl~Gv~~~~~~-k~~~~~~~~~-~~~~~~~~~ 317 (333)
.+++.+++.|+.+|... |++..+.+++ .+..|+.|+
T Consensus 7 l~iICVaIi~lIvYgiYnkk~~~q~~~p~~e~ye~~e~ 44 (68)
T PHA03049 7 LVIICVVIIGLIVYGIYNKKTTTSQNPPSQEKYEKMED 44 (68)
T ss_pred HHHHHHHHHHHHHHHHHhcccccCCCCCChhhccCchh
Confidence 45666777786666644 4444444443 233445444
No 128
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=36.25 E-value=11 Score=34.67 Aligned_cols=55 Identities=9% Similarity=0.134 Sum_probs=44.9
Q ss_pred HHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhh
Q 019984 240 FFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYT 294 (333)
Q Consensus 240 ~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~ 294 (333)
.+-.++++..|-...-+--.+..++++++++++++++-+..-..+..+++.|..+
T Consensus 117 ~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~l 171 (347)
T KOG1442|consen 117 SFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGL 171 (347)
T ss_pred hccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehhee
Confidence 4555678887777777777777889999999999999999888888888887655
No 129
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=36.01 E-value=37 Score=30.87 Aligned_cols=32 Identities=9% Similarity=0.067 Sum_probs=27.1
Q ss_pred HHHHHHhCcccCchhHHHHHHHHHhhHHhhcc
Q 019984 107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 138 (333)
Q Consensus 107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~ 138 (333)
+.++++++|++|..||+++..++.+.+=.+.+
T Consensus 252 l~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt 283 (292)
T COG5006 252 LSGLIFLGETLTLIQWLAIAAVIAASAGSTLT 283 (292)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHhccccc
Confidence 78999999999999999999988876644443
No 130
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=34.27 E-value=12 Score=24.58 Aligned_cols=19 Identities=5% Similarity=0.240 Sum_probs=13.0
Q ss_pred hhhhhhhhhhhhhccccCC
Q 019984 286 IIVFGALYTRSFFKKVSEK 304 (333)
Q Consensus 286 ~lvl~Gv~~~~~~k~~~~~ 304 (333)
.+++.|++++.+.|++|++
T Consensus 19 ~~~F~gi~~w~~~~~~k~~ 37 (49)
T PF05545_consen 19 FVFFIGIVIWAYRPRNKKR 37 (49)
T ss_pred HHHHHHHHHHHHcccchhh
Confidence 4456788888887665444
No 131
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=33.70 E-value=4.3e+02 Score=25.64 Aligned_cols=21 Identities=10% Similarity=-0.032 Sum_probs=11.8
Q ss_pred CCCCCCCCCcccccccccccc
Q 019984 304 KPRPSEHPMENMHNGASSLMK 324 (333)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~ 324 (333)
||.+-|.+.+.|.+++|++..
T Consensus 432 ~~~~~~~~~~~~~~~~~~~~~ 452 (455)
T TIGR00892 432 QKAALEREGARDKKDAEGDSR 452 (455)
T ss_pred HHHHHhhcccccccccccccc
Confidence 333333445667777777664
No 132
>COG3162 Predicted membrane protein [Function unknown]
Probab=33.22 E-value=2.3e+02 Score=21.84 Aligned_cols=57 Identities=5% Similarity=-0.008 Sum_probs=41.6
Q ss_pred hhHHHHHHHHHHHHHHHHhhhh-ccccccCCCCCCceeehHHHHHHHHHHHHHHHHHHHHH
Q 019984 17 LKMIFAVSGIMTTLVIYGILQE-KIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIA 76 (333)
Q Consensus 17 ~~~~~~~~gi~~~~~~~~~~qe-~i~~~~~~~~~~~f~~p~~l~~~~~~~~~~~~~~~~~~ 76 (333)
.-+.+....+|+.|..---++. .+.+..+| +..+..+-+.+.|++.+.++..++...
T Consensus 27 ~~ltl~flv~Y~~filLiaf~~~~l~tp~~~---~~Vt~Gip~gvg~fv~tfVlt~IYv~r 84 (102)
T COG3162 27 VPLTLIFLVVYFGFILLIAFAPGWLATPLFG---ASVTRGIPFGVGVFVMTFVLTGIYVRR 84 (102)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHhcCcccC---CceehhHhHHHHHHHHHHHHHHHHhhH
Confidence 4466778889999987777777 44443444 357788888899999999998886543
No 133
>PF11346 DUF3149: Protein of unknown function (DUF3149); InterPro: IPR021494 This bacterial family of proteins has no known function.
Probab=28.60 E-value=22 Score=22.74 Aligned_cols=29 Identities=14% Similarity=0.317 Sum_probs=19.7
Q ss_pred ccCCCcccccchhhhhhh-hhhhhhhhccc
Q 019984 273 FRHPLSWEQCIGSIIVFG-ALYTRSFFKKV 301 (333)
Q Consensus 273 fge~~t~~~~iG~~lvl~-Gv~~~~~~k~~ 301 (333)
|+++..+...+.++.+++ +.++..+..+|
T Consensus 7 F~s~vGL~Sl~vI~~~igm~~~~~~~F~~k 36 (42)
T PF11346_consen 7 FGSDVGLMSLIVIVFTIGMGVFFIRYFIRK 36 (42)
T ss_pred hcChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 778888888777777764 66665555443
No 134
>PF04971 Lysis_S: Lysis protein S ; InterPro: IPR007054 The lysis S protein is a cytotoxic protein forming holes in membranes causing cell lysis. The action of Lysis S is independent of the proportion of acidic phospholipids in the membrane [].
Probab=28.35 E-value=24 Score=25.06 Aligned_cols=20 Identities=15% Similarity=0.321 Sum_probs=11.6
Q ss_pred hhhhhhhhhhccccCCCCCC
Q 019984 289 FGALYTRSFFKKVSEKPRPS 308 (333)
Q Consensus 289 l~Gv~~~~~~k~~~~~~~~~ 308 (333)
+.+.+...+.|.|+++++++
T Consensus 46 ~lt~ltN~YFK~k~drr~~a 65 (68)
T PF04971_consen 46 LLTYLTNLYFKIKEDRRKAA 65 (68)
T ss_pred HHHHHhHhhhhhhHhhhHhh
Confidence 34455556677776665543
No 135
>cd01324 cbb3_Oxidase_CcoQ Cytochrome cbb oxidase CcoQ. Cytochrome cbb3 oxidase, the terminal oxidase in the respiratory chains of proteobacteria, is a multi-chain transmembrane protein located in the cell membrane. Like other cytochrome oxidases, it catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. Found exclusively in proteobacteria, cbb3 is believed to be a modern enzyme that has evolved independently to perform a specialized function in microaerobic energy metabolism. The cbb3 operon contains four genes (ccoNOQP or fixNOQP), with ccoN coding for subunit I. Instead of a CuA-containing subunit II analogous to other cytochrome oxidases, cbb3 utilizes subunits ccoO and ccoP, which contain one and two hemes, respectively, to transfer electrons to the binuclear center. ccoQ, the fourth subunit, is a single transmembrane helix protein. It has been shown to protect the core complex from proteolytic degradation by serine proteases. See cd00919, cd01322
Probab=27.60 E-value=12 Score=24.71 Aligned_cols=22 Identities=9% Similarity=0.006 Sum_probs=16.3
Q ss_pred hhhhhhhhhhhhhhccccCCCC
Q 019984 285 SIIVFGALYTRSFFKKVSEKPR 306 (333)
Q Consensus 285 ~~lvl~Gv~~~~~~k~~~~~~~ 306 (333)
+.+++.|+.++.+.|++|++..
T Consensus 19 ~~~~Figiv~wa~~p~~k~~f~ 40 (48)
T cd01324 19 LALFFLGVVVWAFRPGRKKAFD 40 (48)
T ss_pred HHHHHHHHHHHHhCCCcchhHH
Confidence 4677889999998877666543
No 136
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=26.80 E-value=42 Score=30.95 Aligned_cols=41 Identities=12% Similarity=0.237 Sum_probs=35.0
Q ss_pred HHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhccccC
Q 019984 263 LVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSE 303 (333)
Q Consensus 263 v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~~~~ 303 (333)
+.++.+++++.|.+-+..|+...+++-.|+.+..+.+.++-
T Consensus 103 l~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~ 143 (330)
T KOG1583|consen 103 LANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDG 143 (330)
T ss_pred HHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcch
Confidence 34567899999999999999999999999999888776544
No 137
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=24.92 E-value=35 Score=27.32 Aligned_cols=11 Identities=0% Similarity=-0.070 Sum_probs=3.5
Q ss_pred hhhhhccccCC
Q 019984 294 TRSFFKKVSEK 304 (333)
Q Consensus 294 ~~~~~k~~~~~ 304 (333)
+|...|+|||+
T Consensus 85 ~y~irR~~Kk~ 95 (122)
T PF01102_consen 85 SYCIRRLRKKS 95 (122)
T ss_dssp HHHHHHHS---
T ss_pred HHHHHHHhccC
Confidence 34444444444
No 138
>COG4736 CcoQ Cbb3-type cytochrome oxidase, subunit 3 [Posttranslational modification, protein turnover, chaperones]
Probab=24.67 E-value=30 Score=24.02 Aligned_cols=27 Identities=11% Similarity=0.021 Sum_probs=17.4
Q ss_pred chhhhhhhhhhhhhhhccccCCCCCCC
Q 019984 283 IGSIIVFGALYTRSFFKKVSEKPRPSE 309 (333)
Q Consensus 283 iG~~lvl~Gv~~~~~~k~~~~~~~~~~ 309 (333)
+-+.+++.|+.++.+.+.+|++...++
T Consensus 16 ~~~~l~fiavi~~ayr~~~K~~~d~aa 42 (60)
T COG4736 16 IAFTLFFIAVIYFAYRPGKKGEFDEAA 42 (60)
T ss_pred HHHHHHHHHHHHHHhcccchhhHHHHh
Confidence 334566778888888877666544333
No 139
>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region. The remainder of the protein sequence is serine-rich and of low complexity, and is therefore impossible to align accurately. Mid2 is thought to act as a mechanosensor of cell wall stress. The C-terminal cytoplasmic region of Mid2 is known to interact with Rom2, a guanine nucleotide exchange factor (GEF) for Rho1, which is part of the cell wall integrity signalling pathway [].
Probab=23.83 E-value=62 Score=26.93 Aligned_cols=12 Identities=33% Similarity=0.487 Sum_probs=7.0
Q ss_pred cccccCCCCCCC
Q 019984 320 SSLMKGSSPRGG 331 (333)
Q Consensus 320 ~~~~~~~~~~~~ 331 (333)
+...++.||.|+
T Consensus 111 ~~~y~s~splg~ 122 (154)
T PF04478_consen 111 SDKYESNSPLGS 122 (154)
T ss_pred ccccccCCCCCC
Confidence 344466666666
No 140
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=22.39 E-value=8.1e+02 Score=24.68 Aligned_cols=26 Identities=8% Similarity=-0.055 Sum_probs=16.6
Q ss_pred HhhChhHHHHHHHHHHHHHHHhHhhh
Q 019984 247 RTFGALTFATIMTTRQLVSIVLSCVW 272 (333)
Q Consensus 247 ~~~~alt~sv~~~l~~v~sills~~~ 272 (333)
.|.-+....+..-..++-+.+.|.+.
T Consensus 342 GRv~si~~~~~~g~~~lGsll~G~la 367 (524)
T PF05977_consen 342 GRVFSIYQMVFFGGMPLGSLLWGFLA 367 (524)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555666666777777777754
No 141
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=22.28 E-value=6.1e+02 Score=23.22 Aligned_cols=27 Identities=11% Similarity=0.001 Sum_probs=17.7
Q ss_pred hCcccCchhHHHHHHHHHhhHHhhccC
Q 019984 113 MQKRYKGYDYFLALLVTLGCSIFILFP 139 (333)
Q Consensus 113 ~~~k~s~~~~l~vlli~~Gv~l~~~~~ 139 (333)
-+...+..+.++.+.-..|++++...+
T Consensus 56 ~~~~~~~~~lvg~~~F~~GLilVv~~g 82 (265)
T COG2116 56 PGAPGGLAKLVGGLVFSLGLILVVIAG 82 (265)
T ss_pred CCCCcchHHHHHHHHHHHHHHHhhhhC
Confidence 344445567777777777877777663
No 142
>PF03348 Serinc: Serine incorporator (Serinc); InterPro: IPR005016 This is a family of proteins which display differential expression in various tumour and cell lines. The function of these proteins is unknown. ; GO: 0016020 membrane
Probab=22.16 E-value=7.2e+02 Score=24.42 Aligned_cols=24 Identities=29% Similarity=0.447 Sum_probs=17.8
Q ss_pred CCcccccchhhhhhhhhhhhhhhc
Q 019984 276 PLSWEQCIGSIIVFGALYTRSFFK 299 (333)
Q Consensus 276 ~~t~~~~iG~~lvl~Gv~~~~~~k 299 (333)
.-++..++|.++.+..+.+.....
T Consensus 282 ~~~~~~iig~i~~~~~v~yss~ra 305 (429)
T PF03348_consen 282 WNTWQSIIGLIFTFVSVLYSSFRA 305 (429)
T ss_pred cchHHHHHHHHHHHHHHHHhcccc
Confidence 456667888888888887777653
No 143
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.84 E-value=1.1e+02 Score=23.43 Aligned_cols=29 Identities=7% Similarity=0.093 Sum_probs=24.8
Q ss_pred HHHHHHhCcccCchhHHHHHHHHHhhHHh
Q 019984 107 IWGTLIMQKRYKGYDYFLALLVTLGCSIF 135 (333)
Q Consensus 107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~ 135 (333)
.++.+.+||..+|..+.+.+++..|+...
T Consensus 85 ~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 85 PFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 67889999999999999988888887654
No 144
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=21.82 E-value=30 Score=31.81 Aligned_cols=73 Identities=8% Similarity=0.101 Sum_probs=0.0
Q ss_pred HHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHH
Q 019984 111 LIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQI 190 (333)
Q Consensus 111 l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~ 190 (333)
+|.||-.-..-.++++++++=+.+..+- ... ...-..|+++.++.+.+.=.-..|. .++++++.+.++++
T Consensus 71 lF~RrLLCPLGlLCiilimi~lLv~~L~----tLt-----GQ~LF~Gi~~l~l~~lLaL~vW~Ym-~lLr~~GAs~WtiL 140 (381)
T PF05297_consen 71 LFKRRLLCPLGLLCIILIMIVLLVSMLW----TLT-----GQTLFVGIVILFLCCLLALGVWFYM-WLLRELGASFWTIL 140 (381)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHhhcCcchHHHHHHHHHHHHHHHHH----Hhh-----ccHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhhHHHHHH
Confidence 3444445555666766666655544433 111 1334567765444333322223343 36678888888866
Q ss_pred HHh
Q 019984 191 FYT 193 (333)
Q Consensus 191 ~~~ 193 (333)
.+.
T Consensus 141 aFc 143 (381)
T PF05297_consen 141 AFC 143 (381)
T ss_dssp ---
T ss_pred HHH
Confidence 553
No 145
>PRK12437 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=21.73 E-value=53 Score=30.05 Aligned_cols=23 Identities=13% Similarity=0.130 Sum_probs=18.4
Q ss_pred Ccccccchhhhhhhhhhhhhhhc
Q 019984 277 LSWEQCIGSIIVFGALYTRSFFK 299 (333)
Q Consensus 277 ~t~~~~iG~~lvl~Gv~~~~~~k 299 (333)
+|..|+++..+++.|+.+..+.+
T Consensus 235 ls~~Q~~sl~~i~~g~~~~~~~~ 257 (269)
T PRK12437 235 LRIAQVISIPLIIIGIILIIYRR 257 (269)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHH
Confidence 79999999999999976654443
No 146
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=21.29 E-value=3.6e+02 Score=26.79 Aligned_cols=22 Identities=9% Similarity=0.039 Sum_probs=18.4
Q ss_pred cCchhHHHHHHHHHhhHHhhcc
Q 019984 117 YKGYDYFLALLVTLGCSIFILF 138 (333)
Q Consensus 117 ~s~~~~l~vlli~~Gv~l~~~~ 138 (333)
++..|+++++++++|++++...
T Consensus 254 l~~~Q~lSl~~il~gl~~~~~~ 275 (460)
T PRK13108 254 IRINSFTSTFVFIGAVVYIILA 275 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHHh
Confidence 6888999999999998887654
Done!