Query 019990
Match_columns 332
No_of_seqs 206 out of 2108
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 06:08:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019990.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019990hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK05442 malate dehydrogenase; 100.0 1.2E-68 2.7E-73 491.4 36.0 325 3-331 2-326 (326)
2 TIGR01759 MalateDH-SF1 malate 100.0 1.2E-68 2.7E-73 490.9 35.5 320 3-327 1-323 (323)
3 TIGR01757 Malate-DH_plant mala 100.0 5.4E-67 1.2E-71 486.5 37.1 324 3-331 42-368 (387)
4 COG0039 Mdh Malate/lactate deh 100.0 3.7E-67 8E-72 471.5 33.5 307 6-331 1-311 (313)
5 PLN00112 malate dehydrogenase 100.0 9.1E-66 2E-70 484.7 36.3 321 3-331 98-424 (444)
6 cd01338 MDH_choloroplast_like 100.0 1.1E-65 2.3E-70 472.2 35.3 318 4-327 1-320 (322)
7 cd01336 MDH_cytoplasmic_cytoso 100.0 3.4E-65 7.3E-70 470.2 35.2 320 4-328 1-325 (325)
8 cd00704 MDH Malate dehydrogena 100.0 3E-65 6.5E-70 469.4 34.1 317 6-328 1-323 (323)
9 TIGR01758 MDH_euk_cyt malate d 100.0 4.7E-64 1E-68 461.6 34.9 318 7-328 1-323 (324)
10 cd05295 MDH_like Malate dehydr 100.0 9.8E-63 2.1E-67 463.7 34.9 318 3-328 121-451 (452)
11 cd05290 LDH_3 A subgroup of L- 100.0 4.9E-62 1.1E-66 445.1 33.2 298 7-324 1-306 (307)
12 PRK00066 ldh L-lactate dehydro 100.0 1.9E-60 4.1E-65 437.3 35.2 306 1-327 2-313 (315)
13 TIGR01771 L-LDH-NAD L-lactate 100.0 7.9E-61 1.7E-65 436.4 31.3 293 10-322 1-299 (299)
14 PLN00135 malate dehydrogenase 100.0 2.7E-60 5.9E-65 432.3 33.7 304 26-331 3-308 (309)
15 PLN02602 lactate dehydrogenase 100.0 1.3E-59 2.9E-64 434.7 35.2 302 6-327 38-348 (350)
16 KOG1495 Lactate dehydrogenase 100.0 5.4E-60 1.2E-64 405.0 29.0 299 5-325 20-328 (332)
17 KOG1496 Malate dehydrogenase [ 100.0 2.1E-60 4.4E-65 401.1 25.4 330 3-332 2-331 (332)
18 cd05293 LDH_1 A subgroup of L- 100.0 4.3E-59 9.2E-64 427.1 35.0 302 4-325 2-311 (312)
19 TIGR01756 LDH_protist lactate 100.0 2.5E-59 5.4E-64 427.2 32.2 304 23-331 3-312 (313)
20 cd05291 HicDH_like L-2-hydroxy 100.0 3.2E-58 6.9E-63 422.8 34.8 300 6-325 1-305 (306)
21 cd00300 LDH_like L-lactate deh 100.0 6.9E-58 1.5E-62 418.7 34.0 296 8-324 1-299 (300)
22 cd01337 MDH_glyoxysomal_mitoch 100.0 6.1E-57 1.3E-61 410.5 31.9 297 6-331 1-310 (310)
23 TIGR01772 MDH_euk_gproteo mala 100.0 8.9E-57 1.9E-61 410.2 32.8 297 7-331 1-310 (312)
24 PTZ00325 malate dehydrogenase; 100.0 4E-56 8.7E-61 407.0 34.1 301 3-332 6-318 (321)
25 PTZ00117 malate dehydrogenase; 100.0 1.5E-55 3.3E-60 406.0 36.9 304 4-329 4-316 (319)
26 PTZ00082 L-lactate dehydrogena 100.0 3.5E-55 7.6E-60 403.1 36.9 303 3-326 4-319 (321)
27 cd05292 LDH_2 A subgroup of L- 100.0 2E-55 4.2E-60 404.0 33.9 299 6-325 1-306 (308)
28 cd05294 LDH-like_MDH_nadp A la 100.0 3.2E-55 7E-60 402.2 33.8 303 6-326 1-308 (309)
29 TIGR01763 MalateDH_bact malate 100.0 5.2E-55 1.1E-59 399.8 34.1 298 6-326 2-304 (305)
30 PLN00106 malate dehydrogenase 100.0 5.3E-54 1.1E-58 393.3 33.3 294 5-325 18-322 (323)
31 PRK05086 malate dehydrogenase; 100.0 1.2E-53 2.5E-58 391.8 33.6 298 6-332 1-311 (312)
32 PRK06223 malate dehydrogenase; 100.0 1.3E-51 2.9E-56 379.9 35.0 298 5-326 2-305 (307)
33 cd01339 LDH-like_MDH L-lactate 100.0 1.2E-51 2.6E-56 378.6 33.7 293 8-324 1-299 (300)
34 KOG1494 NAD-dependent malate d 100.0 3.4E-48 7.5E-53 333.9 23.1 301 4-331 27-339 (345)
35 cd00650 LDH_MDH_like NAD-depen 100.0 1.5E-46 3.2E-51 338.7 31.7 258 8-324 1-262 (263)
36 PF02866 Ldh_1_C: lactate/mala 100.0 9.7E-37 2.1E-41 258.0 17.0 167 157-330 1-173 (174)
37 PF00056 Ldh_1_N: lactate/mala 100.0 1.7E-28 3.7E-33 200.0 15.2 141 6-155 1-141 (141)
38 cd05298 GH4_GlvA_pagL_like Gly 99.9 1.6E-19 3.4E-24 172.2 31.0 300 6-327 1-394 (437)
39 cd05197 GH4_glycoside_hydrolas 99.9 1.3E-19 2.8E-24 172.6 28.9 186 6-211 1-211 (425)
40 PRK15076 alpha-galactosidase; 99.9 5.8E-19 1.3E-23 168.7 29.4 295 5-327 1-385 (431)
41 cd05296 GH4_P_beta_glucosidase 99.8 5.6E-18 1.2E-22 161.1 30.7 297 6-327 1-380 (419)
42 cd05297 GH4_alpha_glucosidase_ 99.8 2.9E-16 6.3E-21 150.4 29.9 169 6-188 1-197 (423)
43 COG1486 CelF Alpha-galactosida 99.7 2.5E-14 5.3E-19 134.0 24.7 298 4-327 2-397 (442)
44 COG1087 GalE UDP-glucose 4-epi 99.6 2.2E-15 4.8E-20 133.3 9.2 166 6-188 1-176 (329)
45 KOG1502 Flavonol reductase/cin 99.6 8.1E-15 1.8E-19 132.8 11.5 173 4-187 5-197 (327)
46 PRK15181 Vi polysaccharide bio 99.5 4.2E-14 9.1E-19 132.7 8.7 173 4-189 14-200 (348)
47 PF01073 3Beta_HSD: 3-beta hyd 99.5 3.2E-14 6.8E-19 129.4 6.6 178 9-198 1-195 (280)
48 KOG1429 dTDP-glucose 4-6-dehyd 99.5 2.9E-14 6.4E-19 124.7 5.1 190 3-211 25-227 (350)
49 PF02719 Polysacc_synt_2: Poly 99.5 2.6E-14 5.5E-19 128.4 4.6 177 8-211 1-193 (293)
50 PLN02166 dTDP-glucose 4,6-dehy 99.5 1.9E-13 4E-18 131.8 10.3 170 3-188 118-297 (436)
51 PLN00198 anthocyanidin reducta 99.5 4.2E-13 9.1E-18 125.3 12.5 179 3-189 7-203 (338)
52 COG1088 RfbB dTDP-D-glucose 4, 99.5 1.9E-13 4.1E-18 120.7 8.6 193 6-211 1-207 (340)
53 PF02056 Glyco_hydro_4: Family 99.5 8.2E-12 1.8E-16 105.0 17.7 156 7-174 1-183 (183)
54 PLN02206 UDP-glucuronate decar 99.4 5.8E-13 1.2E-17 128.6 10.4 169 4-188 118-296 (442)
55 PLN02650 dihydroflavonol-4-red 99.4 9E-13 2E-17 123.8 11.2 178 1-189 1-198 (351)
56 PLN02695 GDP-D-mannose-3',5'-e 99.4 6.1E-13 1.3E-17 125.9 9.4 175 1-189 17-202 (370)
57 PLN02572 UDP-sulfoquinovose sy 99.4 1.3E-12 2.9E-17 126.2 11.3 178 4-189 46-263 (442)
58 COG1086 Predicted nucleoside-d 99.4 1.5E-12 3.2E-17 124.6 10.5 201 4-233 249-466 (588)
59 TIGR02622 CDP_4_6_dhtase CDP-g 99.4 1.7E-12 3.7E-17 121.8 9.1 186 5-201 4-209 (349)
60 PLN02427 UDP-apiose/xylose syn 99.4 3.2E-12 6.9E-17 121.6 11.0 172 4-188 13-216 (386)
61 PLN02989 cinnamyl-alcohol dehy 99.4 5.6E-12 1.2E-16 117.0 11.4 177 1-189 1-199 (325)
62 PLN02662 cinnamyl-alcohol dehy 99.3 1E-11 2.2E-16 115.0 12.7 172 4-188 3-196 (322)
63 PRK08125 bifunctional UDP-gluc 99.3 5.6E-12 1.2E-16 127.9 11.1 169 4-188 314-497 (660)
64 PRK11908 NAD-dependent epimera 99.3 5.4E-12 1.2E-16 118.3 9.9 167 5-188 1-183 (347)
65 PLN02896 cinnamyl-alcohol dehy 99.3 1.1E-11 2.4E-16 116.5 12.0 176 4-189 9-211 (353)
66 PRK09987 dTDP-4-dehydrorhamnos 99.3 2.6E-12 5.6E-17 118.1 7.5 159 6-197 1-167 (299)
67 TIGR03589 PseB UDP-N-acetylglu 99.3 9.8E-12 2.1E-16 115.6 11.2 175 4-200 3-183 (324)
68 PLN02986 cinnamyl-alcohol dehy 99.3 2.3E-11 5E-16 112.8 13.1 175 1-188 1-197 (322)
69 PLN02214 cinnamoyl-CoA reducta 99.3 7.1E-12 1.5E-16 117.4 9.8 172 5-189 10-196 (342)
70 PRK10217 dTDP-glucose 4,6-dehy 99.3 8.2E-12 1.8E-16 117.3 8.9 176 5-189 1-195 (355)
71 COG0451 WcaG Nucleoside-diphos 99.3 1.4E-11 3.1E-16 113.2 10.3 167 7-189 2-177 (314)
72 TIGR01472 gmd GDP-mannose 4,6- 99.3 1.1E-11 2.3E-16 116.1 9.2 174 6-188 1-190 (343)
73 PLN02260 probable rhamnose bio 99.3 9.9E-12 2.1E-16 126.4 8.9 188 4-199 5-206 (668)
74 PRK10084 dTDP-glucose 4,6 dehy 99.2 2.5E-11 5.4E-16 113.9 9.0 175 6-189 1-202 (352)
75 PRK11150 rfaD ADP-L-glycero-D- 99.2 4.5E-11 9.8E-16 110.1 10.5 164 8-189 2-175 (308)
76 KOG1430 C-3 sterol dehydrogena 99.2 2.6E-11 5.6E-16 112.1 8.0 183 3-194 2-193 (361)
77 PLN02583 cinnamoyl-CoA reducta 99.2 5E-11 1.1E-15 109.4 9.5 176 4-189 5-198 (297)
78 PLN02686 cinnamoyl-CoA reducta 99.2 5.4E-11 1.2E-15 112.5 9.0 174 4-188 52-250 (367)
79 KOG1371 UDP-glucose 4-epimeras 99.1 8.8E-11 1.9E-15 105.3 7.4 174 5-188 2-187 (343)
80 TIGR01181 dTDP_gluc_dehyt dTDP 99.1 2.9E-10 6.4E-15 104.6 11.1 174 7-189 1-185 (317)
81 PLN02240 UDP-glucose 4-epimera 99.1 2.1E-10 4.6E-15 107.5 9.6 177 1-188 1-191 (352)
82 PLN02653 GDP-mannose 4,6-dehyd 99.1 3.6E-10 7.8E-15 105.7 10.5 176 4-188 5-196 (340)
83 PF01370 Epimerase: NAD depend 99.1 3.1E-11 6.7E-16 106.4 2.2 166 8-188 1-174 (236)
84 PRK10675 UDP-galactose-4-epime 99.1 6.8E-10 1.5E-14 103.5 10.9 172 6-188 1-184 (338)
85 TIGR03466 HpnA hopanoid-associ 99.1 3.1E-10 6.7E-15 105.1 8.0 168 6-189 1-176 (328)
86 PLN02778 3,5-epimerase/4-reduc 99.0 1.7E-09 3.6E-14 99.4 10.3 138 5-175 9-162 (298)
87 PLN02725 GDP-4-keto-6-deoxyman 98.9 3.1E-09 6.7E-14 97.5 8.5 152 9-189 1-165 (306)
88 PRK09135 pteridine reductase; 98.9 6.1E-09 1.3E-13 92.4 10.1 153 4-173 5-175 (249)
89 TIGR02197 heptose_epim ADP-L-g 98.9 4E-09 8.7E-14 97.1 9.0 166 8-189 1-175 (314)
90 PRK06194 hypothetical protein; 98.9 2E-08 4.2E-13 91.5 13.0 165 4-187 5-193 (287)
91 TIGR01214 rmlD dTDP-4-dehydror 98.9 3.3E-09 7.2E-14 96.5 7.9 148 7-189 1-155 (287)
92 CHL00194 ycf39 Ycf39; Provisio 98.9 1E-08 2.3E-13 94.9 11.1 109 6-132 1-110 (317)
93 TIGR01777 yfcH conserved hypot 98.9 5.1E-09 1.1E-13 95.3 7.9 161 8-188 1-169 (292)
94 PRK05865 hypothetical protein; 98.8 2.2E-08 4.7E-13 102.8 12.0 132 6-188 1-132 (854)
95 PRK07201 short chain dehydroge 98.8 1.2E-08 2.5E-13 103.8 9.7 169 6-188 1-182 (657)
96 PLN02996 fatty acyl-CoA reduct 98.8 2.2E-08 4.9E-13 98.1 10.2 185 4-197 10-276 (491)
97 TIGR01179 galE UDP-glucose-4-e 98.8 1.5E-08 3.2E-13 93.6 8.2 169 7-188 1-180 (328)
98 PRK07067 sorbitol dehydrogenas 98.8 6E-08 1.3E-12 86.8 10.5 153 3-173 4-172 (257)
99 PRK06180 short chain dehydroge 98.8 8.1E-08 1.7E-12 87.1 11.4 151 4-172 3-168 (277)
100 PRK13394 3-hydroxybutyrate deh 98.7 6.4E-08 1.4E-12 86.6 10.4 156 5-181 7-182 (262)
101 PRK06482 short chain dehydroge 98.7 5.7E-08 1.2E-12 88.0 10.0 149 6-172 3-166 (276)
102 PLN02260 probable rhamnose bio 98.7 9.4E-08 2E-12 97.5 11.1 144 4-188 379-541 (668)
103 PRK07806 short chain dehydroge 98.7 1.3E-07 2.8E-12 84.1 10.6 170 1-184 1-181 (248)
104 COG1091 RfbD dTDP-4-dehydrorha 98.7 1.2E-07 2.5E-12 85.2 10.1 153 6-193 1-159 (281)
105 PLN03209 translocon at the inn 98.7 1.4E-07 3E-12 92.6 11.3 118 4-132 79-208 (576)
106 PRK05653 fabG 3-ketoacyl-(acyl 98.7 1.4E-07 3E-12 83.4 10.4 154 1-172 1-172 (246)
107 PRK07523 gluconate 5-dehydroge 98.7 1.7E-07 3.8E-12 83.7 11.0 157 5-181 10-184 (255)
108 PRK06500 short chain dehydroge 98.7 1.2E-07 2.5E-12 84.3 9.6 151 4-172 5-168 (249)
109 PRK06138 short chain dehydroge 98.7 1E-07 2.2E-12 84.8 9.2 152 1-172 1-171 (252)
110 PRK07231 fabG 3-ketoacyl-(acyl 98.6 2.6E-07 5.6E-12 82.1 11.2 161 1-181 1-179 (251)
111 PRK12746 short chain dehydroge 98.6 8.1E-07 1.8E-11 79.2 14.2 156 1-173 1-179 (254)
112 PRK07890 short chain dehydroge 98.6 2E-07 4.3E-12 83.3 9.8 166 1-184 1-187 (258)
113 PRK07774 short chain dehydroge 98.6 2.5E-07 5.5E-12 82.2 10.4 156 3-181 4-180 (250)
114 PF04321 RmlD_sub_bind: RmlD s 98.6 1.3E-08 2.8E-13 93.0 1.6 159 6-199 1-166 (286)
115 PRK12429 3-hydroxybutyrate deh 98.6 2.5E-07 5.3E-12 82.6 10.0 156 4-181 3-178 (258)
116 PRK06128 oxidoreductase; Provi 98.6 3.8E-07 8.2E-12 83.8 11.1 153 5-173 55-224 (300)
117 PRK08278 short chain dehydroge 98.6 1E-06 2.2E-11 79.8 13.4 164 1-181 2-189 (273)
118 PRK05717 oxidoreductase; Valid 98.6 3.1E-07 6.7E-12 82.1 9.8 151 5-173 10-176 (255)
119 PRK05875 short chain dehydroge 98.6 8.5E-07 1.8E-11 80.2 12.3 164 3-187 5-189 (276)
120 PRK12829 short chain dehydroge 98.6 5.3E-07 1.1E-11 80.8 10.9 151 4-172 10-178 (264)
121 PRK12823 benD 1,6-dihydroxycyc 98.6 3.8E-07 8.3E-12 81.7 9.8 145 5-172 8-173 (260)
122 COG4221 Short-chain alcohol de 98.6 2.4E-06 5.1E-11 74.5 14.1 161 1-183 1-180 (246)
123 PRK12937 short chain dehydroge 98.6 7.6E-07 1.6E-11 78.8 11.4 162 1-181 1-178 (245)
124 PRK08642 fabG 3-ketoacyl-(acyl 98.5 8.2E-07 1.8E-11 79.0 11.6 162 1-181 1-184 (253)
125 PLN02657 3,8-divinyl protochlo 98.5 4.3E-07 9.3E-12 86.6 10.3 115 4-132 59-182 (390)
126 PLN02253 xanthoxin dehydrogena 98.5 1.4E-06 3E-11 79.0 13.2 152 5-174 18-188 (280)
127 PRK07326 short chain dehydroge 98.5 4.1E-07 8.9E-12 80.2 9.4 151 4-172 5-171 (237)
128 PRK12320 hypothetical protein; 98.5 3.5E-07 7.6E-12 92.2 9.9 135 6-188 1-136 (699)
129 PRK10538 malonic semialdehyde 98.5 9.1E-07 2E-11 78.8 11.7 156 6-181 1-172 (248)
130 PRK12828 short chain dehydroge 98.5 3.9E-07 8.5E-12 80.2 9.1 151 4-172 6-172 (239)
131 PRK07024 short chain dehydroge 98.5 5.1E-07 1.1E-11 80.9 9.9 148 5-172 2-169 (257)
132 COG0300 DltE Short-chain dehyd 98.5 1.2E-06 2.7E-11 78.0 12.2 171 3-197 4-195 (265)
133 PRK06077 fabG 3-ketoacyl-(acyl 98.5 4.1E-07 8.8E-12 80.9 9.2 154 3-173 4-173 (252)
134 PRK12936 3-ketoacyl-(acyl-carr 98.5 6.7E-07 1.4E-11 79.1 10.4 158 4-181 5-177 (245)
135 PRK08267 short chain dehydroge 98.5 1.2E-06 2.6E-11 78.5 12.1 159 5-183 1-176 (260)
136 TIGR01963 PHB_DH 3-hydroxybuty 98.5 6.9E-07 1.5E-11 79.5 10.5 147 6-172 2-168 (255)
137 PRK12826 3-ketoacyl-(acyl-carr 98.5 5.1E-07 1.1E-11 80.1 9.5 161 4-181 5-186 (251)
138 PF07993 NAD_binding_4: Male s 98.5 1.1E-07 2.5E-12 84.9 5.2 169 10-186 1-200 (249)
139 PRK07453 protochlorophyllide o 98.5 3E-07 6.5E-12 85.3 8.1 161 4-173 5-212 (322)
140 PRK06935 2-deoxy-D-gluconate 3 98.5 9.5E-07 2.1E-11 79.1 11.2 157 4-181 14-188 (258)
141 TIGR03325 BphB_TodD cis-2,3-di 98.5 4.6E-07 1E-11 81.4 9.1 165 1-187 1-184 (262)
142 PRK06101 short chain dehydroge 98.5 8.8E-07 1.9E-11 78.5 10.6 149 5-172 1-159 (240)
143 PRK06196 oxidoreductase; Provi 98.5 3.3E-07 7.2E-12 84.8 8.0 163 5-181 26-206 (315)
144 PRK07060 short chain dehydroge 98.5 3.4E-07 7.4E-12 81.1 7.8 148 5-172 9-168 (245)
145 PRK08265 short chain dehydroge 98.5 1.3E-06 2.7E-11 78.6 11.4 162 1-182 1-176 (261)
146 PRK06179 short chain dehydroge 98.5 5.9E-07 1.3E-11 81.0 9.3 144 4-172 3-163 (270)
147 PRK05786 fabG 3-ketoacyl-(acyl 98.5 5.7E-07 1.2E-11 79.3 9.0 155 1-172 1-168 (238)
148 TIGR01746 Thioester-redct thio 98.5 6.1E-07 1.3E-11 84.1 9.7 171 7-187 1-197 (367)
149 PRK08628 short chain dehydroge 98.5 1.1E-06 2.3E-11 78.7 10.8 152 3-173 5-172 (258)
150 PRK08213 gluconate 5-dehydroge 98.5 2E-06 4.4E-11 77.0 12.5 167 4-187 11-196 (259)
151 PRK08264 short chain dehydroge 98.5 5E-07 1.1E-11 79.7 8.4 151 1-172 2-164 (238)
152 PRK05993 short chain dehydroge 98.5 8E-07 1.7E-11 80.6 9.9 145 4-172 3-166 (277)
153 PRK08263 short chain dehydroge 98.5 5.2E-07 1.1E-11 81.7 8.6 148 5-172 3-167 (275)
154 COG1090 Predicted nucleoside-d 98.5 1.5E-06 3.3E-11 76.8 11.1 168 8-198 1-180 (297)
155 PRK06172 short chain dehydroge 98.5 2.1E-06 4.5E-11 76.5 12.3 157 4-182 6-183 (253)
156 TIGR03206 benzo_BadH 2-hydroxy 98.5 1.2E-06 2.6E-11 77.8 10.6 150 5-172 3-170 (250)
157 PRK12825 fabG 3-ketoacyl-(acyl 98.5 8.5E-07 1.9E-11 78.4 9.5 150 4-172 5-174 (249)
158 PRK07478 short chain dehydroge 98.5 3.5E-06 7.6E-11 75.2 13.5 160 1-181 2-182 (254)
159 PF03721 UDPG_MGDP_dh_N: UDP-g 98.5 2.2E-06 4.7E-11 73.1 11.4 111 6-136 1-126 (185)
160 PRK07856 short chain dehydroge 98.5 1E-06 2.3E-11 78.6 9.8 149 1-173 2-167 (252)
161 PRK07666 fabG 3-ketoacyl-(acyl 98.5 2E-06 4.3E-11 76.0 11.5 150 5-172 7-174 (239)
162 PRK08643 acetoin reductase; Va 98.5 4.6E-06 1E-10 74.5 13.9 156 6-181 3-177 (256)
163 PRK12744 short chain dehydroge 98.5 4.2E-06 9.2E-11 74.8 13.7 159 4-181 7-184 (257)
164 PRK07102 short chain dehydroge 98.5 2.6E-06 5.6E-11 75.6 12.1 150 5-172 1-166 (243)
165 TIGR01832 kduD 2-deoxy-D-gluco 98.4 1.5E-06 3.2E-11 77.3 10.5 159 1-181 1-178 (248)
166 PRK05557 fabG 3-ketoacyl-(acyl 98.4 1.4E-06 3E-11 77.0 10.4 162 1-181 1-180 (248)
167 PRK05565 fabG 3-ketoacyl-(acyl 98.4 1.4E-06 3.1E-11 77.1 10.4 161 1-181 1-180 (247)
168 PRK07814 short chain dehydroge 98.4 1.7E-06 3.7E-11 77.8 11.0 152 4-173 9-179 (263)
169 PRK06197 short chain dehydroge 98.4 1.8E-06 3.9E-11 79.5 11.3 159 4-173 15-197 (306)
170 PRK05876 short chain dehydroge 98.4 8.5E-07 1.9E-11 80.5 9.0 150 4-172 5-174 (275)
171 COG1004 Ugd Predicted UDP-gluc 98.4 1.1E-05 2.3E-10 75.0 16.1 110 6-135 1-125 (414)
172 PRK07825 short chain dehydroge 98.4 1.1E-06 2.4E-11 79.4 9.6 158 1-181 1-175 (273)
173 PRK07985 oxidoreductase; Provi 98.4 8.1E-07 1.8E-11 81.4 8.8 151 6-172 50-217 (294)
174 PRK12747 short chain dehydroge 98.4 5.1E-06 1.1E-10 74.1 13.7 159 4-181 3-183 (252)
175 PF13460 NAD_binding_10: NADH( 98.4 1.1E-06 2.4E-11 74.4 8.9 145 8-189 1-151 (183)
176 PRK12827 short chain dehydroge 98.4 2E-06 4.4E-11 76.1 11.0 153 4-172 5-178 (249)
177 PRK12384 sorbitol-6-phosphate 98.4 1.5E-06 3.2E-11 77.9 10.1 148 6-172 3-172 (259)
178 PRK12935 acetoacetyl-CoA reduc 98.4 2E-06 4.4E-11 76.3 10.9 159 4-181 5-181 (247)
179 PRK07069 short chain dehydroge 98.4 2.7E-06 5.9E-11 75.5 11.7 156 7-181 1-178 (251)
180 PRK08085 gluconate 5-dehydroge 98.4 1.7E-06 3.7E-11 77.3 10.3 159 3-181 7-183 (254)
181 PRK12745 3-ketoacyl-(acyl-carr 98.4 1.7E-06 3.7E-11 77.1 10.2 150 6-172 3-178 (256)
182 PRK07576 short chain dehydroge 98.4 1.4E-06 3E-11 78.5 9.6 153 3-173 7-176 (264)
183 PRK08219 short chain dehydroge 98.4 3.8E-06 8.1E-11 73.4 11.9 146 5-173 3-161 (227)
184 PRK08226 short chain dehydroge 98.4 1.8E-06 3.9E-11 77.5 9.7 158 4-181 5-180 (263)
185 PRK06182 short chain dehydroge 98.4 1.8E-06 3.9E-11 78.0 9.6 151 4-180 2-170 (273)
186 PRK06200 2,3-dihydroxy-2,3-dih 98.4 3.1E-06 6.6E-11 76.0 10.8 158 3-181 4-180 (263)
187 PRK06701 short chain dehydroge 98.4 3.5E-06 7.6E-11 77.1 11.1 158 5-181 46-220 (290)
188 PRK06914 short chain dehydroge 98.4 1.8E-06 3.9E-11 78.3 9.1 147 5-171 3-170 (280)
189 PRK09134 short chain dehydroge 98.4 2.2E-06 4.7E-11 76.8 9.4 164 3-187 7-188 (258)
190 PRK09072 short chain dehydroge 98.4 2.4E-06 5.3E-11 76.7 9.7 161 1-181 1-177 (263)
191 PRK07775 short chain dehydroge 98.4 3.6E-06 7.8E-11 76.2 10.8 150 5-172 10-177 (274)
192 PRK07454 short chain dehydroge 98.4 2.3E-06 4.9E-11 75.7 9.3 152 1-172 1-173 (241)
193 PRK06113 7-alpha-hydroxysteroi 98.4 8.1E-06 1.8E-10 72.9 12.9 163 4-187 10-189 (255)
194 PRK08220 2,3-dihydroxybenzoate 98.3 2E-06 4.4E-11 76.5 8.9 152 4-181 7-173 (252)
195 PRK06123 short chain dehydroge 98.3 3.6E-06 7.7E-11 74.7 10.5 150 6-172 3-175 (248)
196 PRK06924 short chain dehydroge 98.3 1.7E-06 3.6E-11 77.1 8.3 160 5-183 1-183 (251)
197 PRK06124 gluconate 5-dehydroge 98.3 2.5E-06 5.5E-11 76.2 9.5 152 4-173 10-179 (256)
198 PRK12742 oxidoreductase; Provi 98.3 7.5E-06 1.6E-10 72.1 12.4 161 1-181 1-171 (237)
199 PRK12939 short chain dehydroge 98.3 3.3E-06 7.2E-11 74.9 10.1 157 5-181 7-181 (250)
200 PRK07063 short chain dehydroge 98.3 6E-06 1.3E-10 73.9 11.7 158 5-182 7-184 (260)
201 PRK06841 short chain dehydroge 98.3 4E-06 8.6E-11 74.8 10.5 151 4-173 14-180 (255)
202 PRK06398 aldose dehydrogenase; 98.3 9.4E-06 2E-10 72.8 12.9 154 4-187 5-173 (258)
203 PRK05866 short chain dehydroge 98.3 1.1E-05 2.4E-10 73.9 13.4 151 4-173 39-211 (293)
204 PRK07097 gluconate 5-dehydroge 98.3 5.5E-06 1.2E-10 74.5 10.8 150 4-173 9-178 (265)
205 PRK08339 short chain dehydroge 98.3 1.7E-05 3.6E-10 71.4 14.0 156 4-181 7-182 (263)
206 PRK07035 short chain dehydroge 98.3 7.7E-06 1.7E-10 72.8 11.6 159 2-180 5-182 (252)
207 PRK06181 short chain dehydroge 98.3 5.7E-06 1.2E-10 74.2 10.8 149 6-172 2-168 (263)
208 PRK12481 2-deoxy-D-gluconate 3 98.3 5.6E-06 1.2E-10 74.0 10.5 155 4-181 7-181 (251)
209 PRK08993 2-deoxy-D-gluconate 3 98.3 1.3E-05 2.7E-10 71.7 12.8 156 4-181 9-183 (253)
210 PRK07023 short chain dehydroge 98.3 2.1E-06 4.6E-11 76.1 7.6 156 5-183 1-176 (243)
211 PRK07109 short chain dehydroge 98.3 1.2E-05 2.6E-10 75.1 12.9 159 5-183 8-186 (334)
212 PLN00141 Tic62-NAD(P)-related 98.3 4.1E-06 8.8E-11 74.9 9.4 114 4-132 16-132 (251)
213 PRK08277 D-mannonate oxidoredu 98.3 4.7E-06 1E-10 75.5 9.9 155 5-181 10-199 (278)
214 PRK07819 3-hydroxybutyryl-CoA 98.3 1.6E-05 3.5E-10 72.5 13.4 107 1-134 1-122 (286)
215 PRK06463 fabG 3-ketoacyl-(acyl 98.3 1.1E-05 2.3E-10 72.2 12.0 159 4-187 6-182 (255)
216 PRK06550 fabG 3-ketoacyl-(acyl 98.3 4.8E-06 1E-10 73.3 9.6 156 1-182 1-166 (235)
217 PRK05884 short chain dehydroge 98.3 1.2E-05 2.7E-10 70.5 12.1 150 6-181 1-165 (223)
218 PF02737 3HCDH_N: 3-hydroxyacy 98.3 8.2E-06 1.8E-10 69.3 10.5 101 7-134 1-115 (180)
219 PRK08589 short chain dehydroge 98.3 9.6E-06 2.1E-10 73.3 11.5 154 4-181 5-179 (272)
220 PRK06171 sorbitol-6-phosphate 98.3 5.6E-06 1.2E-10 74.4 9.9 153 3-181 7-183 (266)
221 PRK09291 short chain dehydroge 98.3 8.6E-06 1.9E-10 72.7 11.0 147 6-172 3-163 (257)
222 PRK05650 short chain dehydroge 98.3 6.7E-06 1.4E-10 74.2 10.3 154 6-181 1-174 (270)
223 PRK08945 putative oxoacyl-(acy 98.3 3.5E-05 7.7E-10 68.4 14.6 163 4-187 11-195 (247)
224 PRK09186 flagellin modificatio 98.2 1.1E-05 2.3E-10 72.0 11.2 169 4-187 3-198 (256)
225 PRK05693 short chain dehydroge 98.2 4E-06 8.6E-11 75.8 8.1 145 5-171 1-160 (274)
226 PRK08177 short chain dehydroge 98.2 1E-05 2.2E-10 70.9 10.5 158 5-181 1-172 (225)
227 PRK08063 enoyl-(acyl carrier p 98.2 1.1E-05 2.3E-10 71.7 10.7 158 4-181 3-179 (250)
228 PLN02503 fatty acyl-CoA reduct 98.2 8.3E-06 1.8E-10 81.3 10.9 122 4-131 118-267 (605)
229 PRK07074 short chain dehydroge 98.2 1E-05 2.2E-10 72.3 10.4 149 6-173 3-167 (257)
230 PRK05867 short chain dehydroge 98.2 1.1E-05 2.4E-10 72.0 10.3 160 3-181 7-186 (253)
231 PRK09242 tropinone reductase; 98.2 7.4E-06 1.6E-10 73.2 9.2 158 4-181 8-185 (257)
232 PRK08340 glucose-1-dehydrogena 98.2 1.7E-05 3.6E-10 71.1 11.5 155 6-181 1-176 (259)
233 PRK07792 fabG 3-ketoacyl-(acyl 98.2 1.6E-05 3.4E-10 73.3 11.5 164 4-187 11-198 (306)
234 PRK06139 short chain dehydroge 98.2 2.5E-05 5.5E-10 72.8 12.9 150 4-173 6-175 (330)
235 PRK07424 bifunctional sterol d 98.2 9.6E-06 2.1E-10 77.4 10.2 106 3-118 176-285 (406)
236 PRK06057 short chain dehydroge 98.2 1.7E-05 3.7E-10 70.8 11.3 147 4-172 6-172 (255)
237 PRK08703 short chain dehydroge 98.2 4.1E-05 8.8E-10 67.6 13.4 158 5-181 6-186 (239)
238 PRK06949 short chain dehydroge 98.2 7.5E-06 1.6E-10 73.1 8.8 157 5-181 9-191 (258)
239 PRK08217 fabG 3-ketoacyl-(acyl 98.2 9.7E-06 2.1E-10 71.9 9.3 152 1-172 1-181 (253)
240 TIGR01830 3oxo_ACP_reduc 3-oxo 98.2 1.2E-05 2.7E-10 70.6 9.7 149 8-173 1-167 (239)
241 KOG1431 GDP-L-fucose synthetas 98.2 1.2E-05 2.5E-10 69.1 9.0 278 5-326 1-312 (315)
242 PRK06523 short chain dehydroge 98.2 5.2E-06 1.1E-10 74.3 7.3 149 5-181 9-177 (260)
243 PLN00016 RNA-binding protein; 98.2 5.2E-06 1.1E-10 78.9 7.7 152 4-189 51-216 (378)
244 PRK06484 short chain dehydroge 98.2 1.5E-05 3.3E-10 78.8 11.2 157 5-181 269-439 (520)
245 PRK08251 short chain dehydroge 98.2 4.2E-05 9.1E-10 67.9 13.0 149 5-173 2-173 (248)
246 PRK12938 acetyacetyl-CoA reduc 98.2 3.4E-05 7.4E-10 68.4 12.3 157 5-180 3-177 (246)
247 PRK06198 short chain dehydroge 98.1 2E-05 4.3E-10 70.4 10.8 152 4-173 5-176 (260)
248 PRK08324 short chain dehydroge 98.1 1.2E-05 2.7E-10 82.1 10.6 151 5-173 422-590 (681)
249 PRK06114 short chain dehydroge 98.1 2.7E-05 5.9E-10 69.5 11.5 159 4-181 7-185 (254)
250 PRK07904 short chain dehydroge 98.1 4.2E-05 9.1E-10 68.5 12.7 150 4-172 7-177 (253)
251 PRK06947 glucose-1-dehydrogena 98.1 2.2E-05 4.8E-10 69.6 10.7 157 5-180 2-181 (248)
252 KOG0747 Putative NAD+-dependen 98.1 2.4E-06 5.2E-11 75.6 4.0 182 4-198 5-203 (331)
253 PRK07066 3-hydroxybutyryl-CoA 98.1 6.2E-05 1.3E-09 69.6 13.5 106 5-136 7-122 (321)
254 PRK07578 short chain dehydroge 98.1 2.6E-05 5.7E-10 66.9 10.5 141 6-182 1-150 (199)
255 PRK07832 short chain dehydroge 98.1 3.8E-05 8.2E-10 69.3 11.7 156 6-181 1-176 (272)
256 PRK12824 acetoacetyl-CoA reduc 98.1 1.4E-05 3E-10 70.6 8.6 148 6-172 3-170 (245)
257 TIGR03443 alpha_am_amid L-amin 98.1 1.2E-05 2.6E-10 88.6 10.0 177 4-188 970-1183(1389)
258 PRK09730 putative NAD(P)-bindi 98.1 2.1E-05 4.5E-10 69.6 9.7 158 6-181 2-186 (247)
259 KOG1205 Predicted dehydrogenas 98.1 8.5E-05 1.8E-09 67.0 13.5 157 4-180 11-189 (282)
260 PRK05854 short chain dehydroge 98.1 2.2E-05 4.7E-10 72.7 9.7 170 5-187 14-207 (313)
261 PRK08416 7-alpha-hydroxysteroi 98.1 7.1E-05 1.5E-09 67.1 12.8 157 4-181 7-190 (260)
262 PRK05855 short chain dehydroge 98.1 3.4E-05 7.4E-10 77.0 11.6 157 4-181 314-490 (582)
263 TIGR02632 RhaD_aldol-ADH rhamn 98.1 3.2E-05 6.9E-10 78.9 11.4 155 5-180 414-590 (676)
264 PRK08415 enoyl-(acyl carrier p 98.1 3.3E-05 7.2E-10 70.0 10.5 162 1-181 1-182 (274)
265 PRK12743 oxidoreductase; Provi 98.1 2.6E-05 5.7E-10 69.7 9.7 152 5-173 2-172 (256)
266 PRK07577 short chain dehydroge 98.1 2.1E-05 4.6E-10 69.1 8.9 139 5-172 3-157 (234)
267 PRK08936 glucose-1-dehydrogena 98.1 6.1E-05 1.3E-09 67.5 12.0 159 4-182 6-184 (261)
268 PRK08293 3-hydroxybutyryl-CoA 98.0 0.0001 2.2E-09 67.4 13.4 104 5-134 3-121 (287)
269 TIGR02415 23BDH acetoin reduct 98.0 6.1E-05 1.3E-09 67.0 11.7 155 6-181 1-175 (254)
270 PRK12367 short chain dehydroge 98.0 5.3E-05 1.1E-09 67.6 10.5 104 5-119 14-120 (245)
271 PLN02353 probable UDP-glucose 98.0 0.00016 3.6E-09 70.3 14.5 121 5-135 1-132 (473)
272 PRK06953 short chain dehydroge 98.0 4.7E-05 1E-09 66.5 9.6 148 5-171 1-163 (222)
273 PRK07677 short chain dehydroge 98.0 0.00013 2.8E-09 65.0 12.5 157 6-181 2-177 (252)
274 PRK12748 3-ketoacyl-(acyl-carr 98.0 4.2E-05 9.1E-10 68.3 9.3 156 1-173 1-186 (256)
275 PRK06483 dihydromonapterin red 98.0 5.2E-05 1.1E-09 66.8 9.7 148 5-173 2-167 (236)
276 PF01210 NAD_Gly3P_dh_N: NAD-d 98.0 5E-05 1.1E-09 63.0 9.0 93 7-129 1-101 (157)
277 COG2910 Putative NADH-flavin r 98.0 7.5E-05 1.6E-09 62.3 9.8 104 6-131 1-104 (211)
278 PRK08261 fabG 3-ketoacyl-(acyl 97.9 6.7E-05 1.5E-09 72.9 10.9 151 5-173 210-375 (450)
279 PRK06940 short chain dehydroge 97.9 0.00012 2.5E-09 66.4 11.7 161 7-181 4-194 (275)
280 PRK05872 short chain dehydroge 97.9 6E-05 1.3E-09 69.1 9.9 150 5-172 9-174 (296)
281 PRK07889 enoyl-(acyl carrier p 97.9 0.00015 3.1E-09 65.0 12.1 159 4-181 6-183 (256)
282 TIGR01831 fabG_rel 3-oxoacyl-( 97.9 4.7E-05 1E-09 67.2 8.8 148 8-173 1-168 (239)
283 TIGR02685 pter_reduc_Leis pter 97.9 0.00014 3E-09 65.5 12.0 158 6-182 2-199 (267)
284 PRK07062 short chain dehydroge 97.9 0.00012 2.6E-09 65.7 11.4 155 5-181 8-184 (265)
285 TIGR03649 ergot_EASG ergot alk 97.9 4.8E-05 1E-09 69.2 9.0 98 7-132 1-105 (285)
286 PRK07370 enoyl-(acyl carrier p 97.9 0.0001 2.2E-09 66.1 10.9 160 4-181 5-186 (258)
287 PRK06484 short chain dehydroge 97.9 5.7E-05 1.2E-09 74.8 10.1 154 1-172 1-172 (520)
288 PLN02780 ketoreductase/ oxidor 97.9 6.6E-05 1.4E-09 69.7 9.7 157 5-181 53-233 (320)
289 PRK07533 enoyl-(acyl carrier p 97.9 0.00013 2.8E-09 65.4 11.2 159 4-181 9-187 (258)
290 PRK09009 C factor cell-cell si 97.9 0.00011 2.5E-09 64.5 10.3 156 6-180 1-174 (235)
291 TIGR01829 AcAcCoA_reduct aceto 97.9 9.6E-05 2.1E-09 65.1 9.8 155 6-181 1-175 (242)
292 COG0240 GpsA Glycerol-3-phosph 97.9 0.00057 1.2E-08 62.7 14.8 110 5-144 1-123 (329)
293 COG1748 LYS9 Saccharopine dehy 97.9 0.00017 3.8E-09 67.8 11.9 100 5-133 1-101 (389)
294 COG3320 Putative dehydrogenase 97.9 6.6E-05 1.4E-09 69.5 8.7 171 6-187 1-200 (382)
295 PRK07831 short chain dehydroge 97.9 9.3E-05 2E-09 66.3 9.7 157 5-181 17-195 (262)
296 PRK07201 short chain dehydroge 97.9 9.9E-05 2.1E-09 75.2 10.9 148 5-172 371-540 (657)
297 PRK06130 3-hydroxybutyryl-CoA 97.8 0.00042 9.2E-09 64.0 13.9 78 2-89 1-87 (311)
298 PRK06505 enoyl-(acyl carrier p 97.8 0.00026 5.7E-09 64.0 12.2 157 4-181 6-184 (271)
299 TIGR01915 npdG NADPH-dependent 97.8 0.00038 8.2E-09 61.0 12.8 74 6-89 1-76 (219)
300 TIGR03026 NDP-sugDHase nucleot 97.8 0.0005 1.1E-08 66.1 14.6 106 6-131 1-120 (411)
301 PRK07791 short chain dehydroge 97.8 0.00014 3E-09 66.3 9.9 160 4-181 5-195 (286)
302 PRK08017 oxidoreductase; Provi 97.8 0.00011 2.5E-09 65.3 9.1 151 6-182 3-172 (256)
303 PF00106 adh_short: short chai 97.8 8.9E-05 1.9E-09 61.5 7.9 149 6-171 1-165 (167)
304 PRK08862 short chain dehydroge 97.8 0.00086 1.9E-08 59.0 14.4 156 1-180 1-178 (227)
305 PRK06125 short chain dehydroge 97.8 0.00037 8E-09 62.3 12.3 119 3-132 5-140 (259)
306 COG1250 FadB 3-hydroxyacyl-CoA 97.8 0.00024 5.2E-09 64.9 10.9 104 5-135 3-120 (307)
307 PRK06079 enoyl-(acyl carrier p 97.8 0.00019 4.2E-09 64.0 10.3 160 1-181 1-182 (252)
308 PRK08594 enoyl-(acyl carrier p 97.8 0.00036 7.9E-09 62.5 12.1 160 4-181 6-186 (257)
309 PRK05808 3-hydroxybutyryl-CoA 97.8 0.00052 1.1E-08 62.5 13.2 103 5-134 3-119 (282)
310 PRK07530 3-hydroxybutyryl-CoA 97.8 0.00045 9.8E-09 63.2 12.9 75 4-89 3-91 (292)
311 PRK07984 enoyl-(acyl carrier p 97.8 0.00016 3.5E-09 65.1 9.4 160 1-181 1-184 (262)
312 PF05368 NmrA: NmrA-like famil 97.7 0.00014 3.1E-09 64.0 8.8 101 8-132 1-102 (233)
313 PRK08690 enoyl-(acyl carrier p 97.7 0.00075 1.6E-08 60.6 13.4 157 5-182 6-186 (261)
314 PRK07041 short chain dehydroge 97.7 0.0001 2.2E-09 64.6 7.5 145 9-173 1-156 (230)
315 PRK06603 enoyl-(acyl carrier p 97.7 0.00061 1.3E-08 61.1 12.4 156 5-181 8-185 (260)
316 PRK14982 acyl-ACP reductase; P 97.7 0.00012 2.6E-09 68.0 7.7 73 4-93 154-227 (340)
317 PRK08159 enoyl-(acyl carrier p 97.7 0.00065 1.4E-08 61.5 12.4 158 5-181 10-187 (272)
318 PRK06129 3-hydroxyacyl-CoA deh 97.7 0.00085 1.8E-08 61.9 13.2 75 5-89 2-90 (308)
319 COG1089 Gmd GDP-D-mannose dehy 97.7 3.3E-05 7.1E-10 68.6 3.6 163 5-176 2-177 (345)
320 PRK09260 3-hydroxybutyryl-CoA 97.7 0.00039 8.4E-09 63.6 10.9 74 6-89 2-89 (288)
321 PRK05599 hypothetical protein; 97.7 0.0011 2.3E-08 59.0 13.2 154 6-181 1-175 (246)
322 PF03446 NAD_binding_2: NAD bi 97.7 0.00048 1E-08 57.4 10.3 65 5-89 1-65 (163)
323 PRK08303 short chain dehydroge 97.7 0.00048 1E-08 63.5 11.1 160 5-181 8-200 (305)
324 TIGR01500 sepiapter_red sepiap 97.6 0.00034 7.5E-09 62.5 9.8 156 7-182 2-190 (256)
325 PLN02545 3-hydroxybutyryl-CoA 97.6 0.00084 1.8E-08 61.6 12.4 35 4-46 3-37 (295)
326 PRK15057 UDP-glucose 6-dehydro 97.6 0.0017 3.6E-08 61.9 14.6 115 6-137 1-124 (388)
327 PRK12859 3-ketoacyl-(acyl-carr 97.6 0.00067 1.4E-08 60.7 11.4 158 4-181 5-193 (256)
328 PRK11730 fadB multifunctional 97.6 0.00076 1.7E-08 69.3 12.7 104 5-135 313-430 (715)
329 PRK11154 fadJ multifunctional 97.6 0.00075 1.6E-08 69.3 12.5 104 5-135 309-427 (708)
330 TIGR02440 FadJ fatty oxidation 97.6 0.00087 1.9E-08 68.7 12.9 104 5-135 304-422 (699)
331 PRK06249 2-dehydropantoate 2-r 97.6 0.0011 2.3E-08 61.5 12.3 38 1-46 1-38 (313)
332 PRK12921 2-dehydropantoate 2-r 97.6 0.00088 1.9E-08 61.5 11.7 103 6-137 1-108 (305)
333 PRK06997 enoyl-(acyl carrier p 97.6 0.0015 3.3E-08 58.6 13.0 158 5-181 6-184 (260)
334 COG3967 DltE Short-chain dehyd 97.6 0.0017 3.6E-08 55.3 12.1 121 1-133 1-140 (245)
335 TIGR02437 FadB fatty oxidation 97.6 0.00091 2E-08 68.6 12.7 105 4-135 312-430 (714)
336 PRK06035 3-hydroxyacyl-CoA deh 97.6 0.0018 4E-08 59.2 13.4 74 5-89 3-93 (291)
337 PRK08268 3-hydroxy-acyl-CoA de 97.5 0.0015 3.1E-08 64.5 13.2 75 4-89 6-94 (507)
338 PRK07531 bifunctional 3-hydrox 97.5 0.0015 3.3E-08 64.3 13.2 75 5-89 4-88 (495)
339 smart00822 PKS_KR This enzymat 97.5 0.0012 2.6E-08 54.5 10.4 119 6-132 1-136 (180)
340 TIGR02441 fa_ox_alpha_mit fatt 97.5 0.001 2.2E-08 68.5 11.7 104 5-135 335-452 (737)
341 KOG1201 Hydroxysteroid 17-beta 97.5 0.0026 5.7E-08 57.3 12.6 160 5-184 38-217 (300)
342 PRK00094 gpsA NAD(P)H-dependen 97.5 0.0028 6.1E-08 58.7 13.4 75 5-89 1-79 (325)
343 PRK15182 Vi polysaccharide bio 97.4 0.0039 8.4E-08 60.2 14.5 76 3-94 4-89 (425)
344 PRK11064 wecC UDP-N-acetyl-D-m 97.4 0.0037 7.9E-08 60.2 14.4 107 5-135 3-124 (415)
345 PRK06720 hypothetical protein; 97.4 0.0014 3.1E-08 55.0 10.2 81 4-93 15-105 (169)
346 KOG4169 15-hydroxyprostaglandi 97.4 0.00046 9.9E-09 59.6 7.0 161 1-182 1-178 (261)
347 PRK08229 2-dehydropantoate 2-r 97.4 0.0023 4.9E-08 59.9 12.5 76 5-89 2-81 (341)
348 TIGR02279 PaaC-3OHAcCoADH 3-hy 97.4 0.0023 4.9E-08 63.0 12.7 104 4-134 4-121 (503)
349 PF03807 F420_oxidored: NADP o 97.4 0.002 4.3E-08 48.4 9.7 67 7-89 1-69 (96)
350 PF01118 Semialdhyde_dh: Semia 97.4 0.00048 1E-08 54.4 6.3 74 7-89 1-74 (121)
351 PRK12439 NAD(P)H-dependent gly 97.4 0.0033 7.3E-08 58.9 13.0 106 3-135 5-115 (341)
352 TIGR03376 glycerol3P_DH glycer 97.4 0.0032 6.9E-08 58.9 12.3 79 7-88 1-89 (342)
353 PRK06522 2-dehydropantoate 2-r 97.3 0.004 8.8E-08 57.0 13.0 105 6-137 1-106 (304)
354 TIGR01289 LPOR light-dependent 97.3 0.00099 2.1E-08 61.6 8.9 119 5-132 3-143 (314)
355 COG2085 Predicted dinucleotide 97.3 0.0032 6.9E-08 54.1 10.9 68 5-89 1-68 (211)
356 PRK14618 NAD(P)H-dependent gly 97.3 0.0018 3.8E-08 60.3 9.8 76 4-89 3-82 (328)
357 KOG2774 NAD dependent epimeras 97.2 0.00056 1.2E-08 59.3 5.0 181 4-201 43-237 (366)
358 PTZ00345 glycerol-3-phosphate 97.2 0.0054 1.2E-07 57.8 11.8 83 4-88 10-100 (365)
359 PRK14620 NAD(P)H-dependent gly 97.1 0.0084 1.8E-07 55.8 12.6 103 6-134 1-109 (326)
360 COG0702 Predicted nucleoside-d 97.1 0.00076 1.7E-08 60.5 5.5 75 6-93 1-75 (275)
361 KOG2304 3-hydroxyacyl-CoA dehy 97.1 0.0012 2.6E-08 56.9 6.1 105 4-134 10-133 (298)
362 PRK14619 NAD(P)H-dependent gly 97.1 0.0059 1.3E-07 56.3 11.3 53 4-89 3-55 (308)
363 PRK08655 prephenate dehydrogen 97.1 0.018 3.9E-07 55.8 14.7 66 6-89 1-66 (437)
364 cd01078 NAD_bind_H4MPT_DH NADP 97.0 0.0023 5E-08 54.8 7.3 78 4-90 27-106 (194)
365 PRK09620 hypothetical protein; 97.0 0.00062 1.3E-08 60.0 3.8 34 4-44 2-51 (229)
366 PF08659 KR: KR domain; Inter 96.9 0.0044 9.6E-08 52.5 8.3 118 7-132 2-136 (181)
367 PF01488 Shikimate_DH: Shikima 96.9 0.0066 1.4E-07 48.9 8.4 77 4-93 11-87 (135)
368 PLN02730 enoyl-[acyl-carrier-p 96.9 0.04 8.6E-07 50.8 14.4 159 3-181 7-219 (303)
369 COG1028 FabG Dehydrogenases wi 96.9 0.015 3.2E-07 51.5 11.3 153 1-171 1-173 (251)
370 PF02558 ApbA: Ketopantoate re 96.8 0.0078 1.7E-07 49.1 8.6 116 8-158 1-125 (151)
371 COG1893 ApbA Ketopantoate redu 96.8 0.015 3.3E-07 53.5 11.3 126 6-160 1-127 (307)
372 PRK07502 cyclohexadienyl dehyd 96.7 0.026 5.6E-07 52.0 12.4 73 1-89 1-74 (307)
373 PRK06928 pyrroline-5-carboxyla 96.7 0.027 5.8E-07 51.2 12.2 72 5-89 1-72 (277)
374 PLN00015 protochlorophyllide r 96.7 0.0076 1.7E-07 55.5 8.6 115 9-132 1-137 (308)
375 PRK12549 shikimate 5-dehydroge 96.7 0.012 2.6E-07 53.7 9.7 74 5-89 127-200 (284)
376 KOG1200 Mitochondrial/plastidi 96.7 0.013 2.8E-07 49.6 8.9 121 6-135 15-154 (256)
377 KOG1221 Acyl-CoA reductase [Li 96.7 0.0083 1.8E-07 57.8 8.9 112 4-121 11-145 (467)
378 PRK05671 aspartate-semialdehyd 96.7 0.0058 1.3E-07 57.0 7.5 74 1-90 1-75 (336)
379 PF03435 Saccharop_dh: Sacchar 96.7 0.0016 3.5E-08 62.0 3.8 77 8-92 1-78 (386)
380 PRK07634 pyrroline-5-carboxyla 96.7 0.011 2.4E-07 52.5 8.9 72 4-89 3-74 (245)
381 KOG1208 Dehydrogenases with di 96.6 0.025 5.5E-07 52.2 11.1 159 5-174 35-217 (314)
382 PRK06728 aspartate-semialdehyd 96.6 0.0062 1.3E-07 56.8 7.0 77 1-90 1-77 (347)
383 PRK07680 late competence prote 96.6 0.036 7.8E-07 50.2 11.8 70 6-89 1-70 (273)
384 PRK07679 pyrroline-5-carboxyla 96.5 0.012 2.7E-07 53.4 8.7 70 6-89 4-73 (279)
385 COG0677 WecC UDP-N-acetyl-D-ma 96.5 0.055 1.2E-06 50.8 12.7 109 5-134 9-132 (436)
386 PRK11880 pyrroline-5-carboxyla 96.5 0.0094 2E-07 53.7 7.7 69 5-89 2-70 (267)
387 PRK07417 arogenate dehydrogena 96.5 0.024 5.2E-07 51.5 10.4 65 6-89 1-65 (279)
388 COG0569 TrkA K+ transport syst 96.5 0.005 1.1E-07 54.1 5.3 73 6-89 1-74 (225)
389 PRK15461 NADH-dependent gamma- 96.4 0.012 2.6E-07 54.0 7.8 64 6-89 2-65 (296)
390 PLN02688 pyrroline-5-carboxyla 96.4 0.064 1.4E-06 48.2 12.4 68 6-89 1-69 (266)
391 PRK12480 D-lactate dehydrogena 96.4 0.047 1E-06 50.9 11.7 61 5-89 146-206 (330)
392 KOG2865 NADH:ubiquinone oxidor 96.4 0.006 1.3E-07 54.6 5.3 113 7-131 63-176 (391)
393 PF10727 Rossmann-like: Rossma 96.4 0.0065 1.4E-07 48.3 5.0 101 5-140 10-115 (127)
394 PRK05708 2-dehydropantoate 2-r 96.4 0.064 1.4E-06 49.4 12.4 33 5-45 2-34 (305)
395 PLN02968 Probable N-acetyl-gam 96.4 0.011 2.5E-07 56.0 7.4 36 4-45 37-72 (381)
396 TIGR00872 gnd_rel 6-phosphoglu 96.3 0.028 6.1E-07 51.6 9.7 67 6-89 1-67 (298)
397 PTZ00142 6-phosphogluconate de 96.3 0.065 1.4E-06 52.4 12.6 71 5-89 1-74 (470)
398 cd05312 NAD_bind_1_malic_enz N 96.3 0.013 2.9E-07 52.7 7.0 112 5-135 25-144 (279)
399 PRK14874 aspartate-semialdehyd 96.3 0.011 2.4E-07 55.3 6.7 72 5-90 1-72 (334)
400 PRK11559 garR tartronate semia 96.2 0.023 4.9E-07 52.1 8.3 65 5-89 2-66 (296)
401 PRK06732 phosphopantothenate-- 96.2 0.0034 7.5E-08 55.3 2.8 66 12-92 23-92 (229)
402 PRK12491 pyrroline-5-carboxyla 96.2 0.022 4.8E-07 51.6 8.1 69 6-89 3-71 (272)
403 KOG2666 UDP-glucose/GDP-mannos 96.2 0.017 3.7E-07 52.3 7.1 81 5-94 1-91 (481)
404 PF01113 DapB_N: Dihydrodipico 96.2 0.013 2.7E-07 46.5 5.7 72 6-88 1-74 (124)
405 PRK11199 tyrA bifunctional cho 96.1 0.014 3E-07 55.5 6.8 53 5-89 98-150 (374)
406 cd01065 NAD_bind_Shikimate_DH 96.1 0.043 9.3E-07 44.8 8.6 75 4-92 18-92 (155)
407 PRK13302 putative L-aspartate 96.0 0.025 5.5E-07 51.2 7.7 73 1-90 1-76 (271)
408 PRK12490 6-phosphogluconate de 96.0 0.068 1.5E-06 49.1 10.6 64 6-89 1-67 (299)
409 PF02882 THF_DHG_CYH_C: Tetrah 96.0 0.038 8.3E-07 45.8 7.9 57 4-93 35-91 (160)
410 TIGR01505 tartro_sem_red 2-hyd 96.0 0.021 4.6E-07 52.2 7.0 63 7-89 1-63 (291)
411 KOG0725 Reductases with broad 96.0 0.15 3.3E-06 46.1 12.5 158 4-180 7-188 (270)
412 PF02826 2-Hacid_dh_C: D-isome 95.9 0.033 7.3E-07 47.0 7.4 66 4-90 35-100 (178)
413 KOG2711 Glycerol-3-phosphate d 95.9 0.24 5.3E-06 45.5 13.1 105 4-128 20-136 (372)
414 TIGR02813 omega_3_PfaA polyket 95.9 0.049 1.1E-06 63.1 10.7 35 5-45 1997-2031(2582)
415 PLN02383 aspartate semialdehyd 95.8 0.033 7.1E-07 52.2 7.7 73 4-90 6-78 (344)
416 KOG1014 17 beta-hydroxysteroid 95.8 0.04 8.6E-07 50.0 7.7 116 8-134 52-189 (312)
417 PRK06598 aspartate-semialdehyd 95.8 0.035 7.6E-07 52.2 7.6 74 5-90 1-74 (369)
418 PRK09599 6-phosphogluconate de 95.7 0.1 2.2E-06 47.9 10.6 33 6-46 1-33 (301)
419 KOG4039 Serine/threonine kinas 95.7 0.023 5.1E-07 47.3 5.5 106 3-121 16-122 (238)
420 PRK08664 aspartate-semialdehyd 95.7 0.045 9.7E-07 51.5 8.0 33 5-43 3-35 (349)
421 TIGR02371 ala_DH_arch alanine 95.7 0.082 1.8E-06 49.2 9.6 74 4-89 127-200 (325)
422 PRK00048 dihydrodipicolinate r 95.6 0.039 8.5E-07 49.5 7.2 67 5-89 1-68 (257)
423 cd00762 NAD_bind_malic_enz NAD 95.6 0.038 8.3E-07 49.1 6.9 112 5-135 25-145 (254)
424 PRK14106 murD UDP-N-acetylmura 95.6 0.074 1.6E-06 51.7 9.5 79 1-92 1-79 (450)
425 PRK15059 tartronate semialdehy 95.6 0.041 8.8E-07 50.4 7.3 63 6-89 1-63 (292)
426 PLN02712 arogenate dehydrogena 95.6 0.32 6.9E-06 49.8 14.2 65 4-89 51-116 (667)
427 COG0002 ArgC Acetylglutamate s 95.6 0.033 7E-07 51.4 6.4 36 4-45 1-36 (349)
428 PRK08818 prephenate dehydrogen 95.6 0.16 3.4E-06 48.1 11.1 58 3-89 2-59 (370)
429 PRK03659 glutathione-regulated 95.6 0.12 2.5E-06 52.3 11.0 140 5-180 400-542 (601)
430 COG0287 TyrA Prephenate dehydr 95.6 0.12 2.6E-06 46.9 10.1 68 5-89 3-72 (279)
431 PF03949 Malic_M: Malic enzyme 95.5 0.021 4.6E-07 50.8 5.0 112 5-135 25-145 (255)
432 PRK06476 pyrroline-5-carboxyla 95.5 0.05 1.1E-06 48.8 7.5 69 6-89 1-69 (258)
433 PRK06407 ornithine cyclodeamin 95.5 0.092 2E-06 48.3 9.2 75 4-89 116-190 (301)
434 PRK08618 ornithine cyclodeamin 95.5 0.092 2E-06 48.8 9.3 74 4-89 126-200 (325)
435 PRK07688 thiamine/molybdopteri 95.5 0.056 1.2E-06 50.6 7.8 34 5-45 24-57 (339)
436 COG2084 MmsB 3-hydroxyisobutyr 95.5 0.054 1.2E-06 49.2 7.3 65 6-89 1-65 (286)
437 cd05213 NAD_bind_Glutamyl_tRNA 95.5 0.05 1.1E-06 50.3 7.4 73 4-92 177-249 (311)
438 PRK08291 ectoine utilization p 95.5 0.1 2.2E-06 48.6 9.5 75 4-90 131-206 (330)
439 PRK00436 argC N-acetyl-gamma-g 95.4 0.052 1.1E-06 50.9 7.4 25 5-29 2-26 (343)
440 cd01487 E1_ThiF_like E1_ThiF_l 95.4 0.063 1.4E-06 45.2 7.2 33 7-46 1-33 (174)
441 PRK05579 bifunctional phosphop 95.4 0.031 6.7E-07 53.4 5.9 72 4-92 187-278 (399)
442 TIGR02354 thiF_fam2 thiamine b 95.4 0.06 1.3E-06 46.4 7.2 35 4-45 20-54 (200)
443 PRK14194 bifunctional 5,10-met 95.4 0.063 1.4E-06 49.1 7.6 56 4-92 158-213 (301)
444 PRK14192 bifunctional 5,10-met 95.4 0.064 1.4E-06 48.8 7.6 56 4-92 158-213 (283)
445 cd01080 NAD_bind_m-THF_DH_Cycl 95.3 0.063 1.4E-06 44.9 6.9 55 4-92 43-98 (168)
446 PF02423 OCD_Mu_crystall: Orni 95.3 0.1 2.2E-06 48.3 9.0 73 4-88 127-199 (313)
447 cd05212 NAD_bind_m-THF_DH_Cycl 95.3 0.11 2.3E-06 42.2 8.0 56 4-92 27-82 (140)
448 TIGR02992 ectoine_eutC ectoine 95.3 0.11 2.4E-06 48.3 9.2 74 4-89 128-202 (326)
449 PLN02256 arogenate dehydrogena 95.3 0.086 1.9E-06 48.5 8.4 65 4-89 35-100 (304)
450 TIGR01850 argC N-acetyl-gamma- 95.3 0.068 1.5E-06 50.2 7.8 34 6-45 1-35 (346)
451 PRK05479 ketol-acid reductoiso 95.3 0.061 1.3E-06 50.0 7.2 66 4-89 16-81 (330)
452 PRK07340 ornithine cyclodeamin 95.3 0.091 2E-06 48.4 8.4 73 4-90 124-197 (304)
453 PRK06545 prephenate dehydrogen 95.2 0.063 1.4E-06 50.7 7.4 68 6-89 1-68 (359)
454 PRK08040 putative semialdehyde 95.2 0.067 1.4E-06 49.9 7.4 75 2-90 1-75 (336)
455 PRK06300 enoyl-(acyl carrier p 95.2 0.31 6.8E-06 44.7 11.7 34 4-44 7-42 (299)
456 TIGR02356 adenyl_thiF thiazole 95.2 0.068 1.5E-06 46.2 6.9 35 4-45 20-54 (202)
457 PRK14175 bifunctional 5,10-met 95.2 0.072 1.6E-06 48.4 7.3 56 4-92 157-212 (286)
458 PLN02350 phosphogluconate dehy 95.2 0.17 3.7E-06 49.7 10.4 72 4-89 5-80 (493)
459 PRK12475 thiamine/molybdopteri 95.2 0.086 1.9E-06 49.3 8.0 35 5-46 24-58 (338)
460 COG0345 ProC Pyrroline-5-carbo 95.1 0.082 1.8E-06 47.5 7.3 70 5-89 1-70 (266)
461 PTZ00431 pyrroline carboxylate 95.1 0.1 2.3E-06 46.8 8.1 63 4-88 2-64 (260)
462 PF02254 TrkA_N: TrkA-N domain 95.0 0.23 4.9E-06 38.4 8.9 95 8-132 1-97 (116)
463 PRK13304 L-aspartate dehydroge 95.0 0.097 2.1E-06 47.2 7.7 68 5-89 1-69 (265)
464 PRK15438 erythronate-4-phospha 95.0 0.15 3.3E-06 48.3 9.2 61 4-89 115-175 (378)
465 COG1712 Predicted dinucleotide 95.0 0.4 8.8E-06 41.7 10.7 87 6-125 1-87 (255)
466 PRK06141 ornithine cyclodeamin 95.0 0.19 4.1E-06 46.5 9.6 73 4-89 124-197 (314)
467 PRK07589 ornithine cyclodeamin 95.0 0.17 3.7E-06 47.4 9.3 74 4-89 128-201 (346)
468 KOG1207 Diacetyl reductase/L-x 94.9 0.066 1.4E-06 44.6 5.5 155 5-180 7-174 (245)
469 PRK06823 ornithine cyclodeamin 94.8 0.23 4.9E-06 46.0 9.7 74 4-89 127-200 (315)
470 TIGR01035 hemA glutamyl-tRNA r 94.8 0.09 2E-06 50.7 7.3 73 4-92 179-251 (417)
471 PRK00257 erythronate-4-phospha 94.8 0.21 4.6E-06 47.4 9.5 62 4-90 115-176 (381)
472 cd01075 NAD_bind_Leu_Phe_Val_D 94.8 0.16 3.5E-06 43.8 8.0 35 4-46 27-61 (200)
473 PF00670 AdoHcyase_NAD: S-aden 94.7 0.15 3.3E-06 42.2 7.4 67 4-91 22-88 (162)
474 TIGR00465 ilvC ketol-acid redu 94.7 0.11 2.3E-06 48.2 7.3 66 4-89 2-67 (314)
475 PLN02819 lysine-ketoglutarate 94.7 0.049 1.1E-06 57.8 5.6 83 4-90 568-657 (1042)
476 PRK00258 aroE shikimate 5-dehy 94.7 0.19 4.2E-06 45.6 8.9 75 4-92 122-196 (278)
477 PRK13940 glutamyl-tRNA reducta 94.7 0.12 2.6E-06 49.7 7.8 75 4-93 180-254 (414)
478 PRK07574 formate dehydrogenase 94.7 0.13 2.8E-06 49.0 7.8 66 4-89 191-256 (385)
479 TIGR01296 asd_B aspartate-semi 94.7 0.079 1.7E-06 49.6 6.3 70 7-91 1-71 (339)
480 KOG1203 Predicted dehydrogenas 94.7 0.34 7.4E-06 46.1 10.5 28 3-30 77-104 (411)
481 PRK08605 D-lactate dehydrogena 94.6 0.11 2.4E-06 48.5 7.1 62 5-89 146-208 (332)
482 PRK14189 bifunctional 5,10-met 94.6 0.15 3.2E-06 46.3 7.6 56 4-92 157-212 (285)
483 COG0289 DapB Dihydrodipicolina 94.6 0.13 2.8E-06 45.8 7.0 75 5-88 2-76 (266)
484 PRK13243 glyoxylate reductase; 94.6 0.12 2.7E-06 48.2 7.3 63 5-89 150-212 (333)
485 TIGR01724 hmd_rel H2-forming N 94.5 0.88 1.9E-05 41.9 12.3 58 17-89 31-89 (341)
486 PRK14179 bifunctional 5,10-met 94.5 0.14 3.1E-06 46.4 7.3 57 4-93 157-213 (284)
487 PRK14173 bifunctional 5,10-met 94.5 0.16 3.5E-06 46.1 7.6 57 4-93 154-210 (287)
488 PF00899 ThiF: ThiF family; I 94.5 0.058 1.3E-06 43.2 4.3 34 5-45 2-35 (135)
489 PRK03562 glutathione-regulated 94.4 0.35 7.7E-06 49.1 10.8 140 5-179 400-541 (621)
490 PRK00045 hemA glutamyl-tRNA re 94.4 0.15 3.2E-06 49.3 7.8 73 4-92 181-253 (423)
491 PRK14188 bifunctional 5,10-met 94.4 0.17 3.7E-06 46.2 7.7 56 4-92 157-212 (296)
492 PLN03129 NADP-dependent malic 94.4 0.13 2.8E-06 51.0 7.2 111 5-134 321-439 (581)
493 PRK13656 trans-2-enoyl-CoA red 94.3 0.077 1.7E-06 50.2 5.4 33 4-44 40-74 (398)
494 COG0136 Asd Aspartate-semialde 94.3 0.1 2.2E-06 48.2 6.1 24 5-28 1-24 (334)
495 cd01079 NAD_bind_m-THF_DH NAD 94.3 0.17 3.6E-06 43.2 6.9 77 4-93 61-138 (197)
496 PF07991 IlvN: Acetohydroxy ac 94.3 0.2 4.4E-06 41.4 7.2 66 4-89 3-68 (165)
497 KOG0409 Predicted dehydrogenas 94.3 0.15 3.3E-06 46.1 7.0 67 5-91 35-101 (327)
498 PRK08306 dipicolinate synthase 94.3 0.22 4.8E-06 45.6 8.3 68 4-89 151-218 (296)
499 PRK15469 ghrA bifunctional gly 94.3 0.16 3.5E-06 46.9 7.4 64 4-89 135-198 (312)
500 TIGR00978 asd_EA aspartate-sem 94.3 0.17 3.6E-06 47.5 7.6 24 6-29 1-24 (341)
No 1
>PRK05442 malate dehydrogenase; Provisional
Probab=100.00 E-value=1.2e-68 Score=491.42 Aligned_cols=325 Identities=61% Similarity=0.953 Sum_probs=293.0
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCC
Q 019990 3 KNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDV 82 (332)
Q Consensus 3 ~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (332)
++|+||+|+||+|+||+++++.|...++++.+.+.+++|+|++++.+++.|.++||.|+..+...++..+.+.+++++||
T Consensus 2 ~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~y~~~~da 81 (326)
T PRK05442 2 KAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVITDDPNVAFKDA 81 (326)
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEecChHHHhCCC
Confidence 67889999997799999999999998887655556999999976556789999999998755544566667778999999
Q ss_pred cEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCcEEEeecccHH
Q 019990 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHN 162 (332)
Q Consensus 83 DiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~i~~~t~l~~~ 162 (332)
|+||++||.+++++++|.+++..|+++++++++.+.++++|+++++++|||+|++++++++.++++|++|++|.|.||+.
T Consensus 82 DiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~k~s~g~p~~rViG~t~LDs~ 161 (326)
T PRK05442 82 DVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPANTNALIAMKNAPDLPAENFTAMTRLDHN 161 (326)
T ss_pred CEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCchHHHHHHHHHHcCCCCHHHEEeeeHHHHH
Confidence 99999999999999999999999999999999999998767999999999999999999998339999998777999999
Q ss_pred HHHHHHHHHcCCCCCCeeeeEEEecCCCceeecccCcccccCCCCcchhhhccccccchhHHHHHHHhhHHHHHHhcCCc
Q 019990 163 RAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIKARKLS 242 (332)
Q Consensus 163 r~~~~~a~~~~v~~~~v~~~~V~G~hg~~~v~~~s~~~v~~~~~~~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~~~g~~ 242 (332)
|+++++|+++++++++|++++||||||++++|+||++++ +|+|+.+++.+++|..+++.+++++++++|++.||+|
T Consensus 162 R~r~~la~~l~v~~~~V~~~vV~GeHG~s~~~~~S~~~v----~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~kG~t 237 (326)
T PRK05442 162 RALSQLAAKAGVPVADIKKMTVWGNHSATQYPDFRHATI----DGKPAAEVINDQAWLEDTFIPTVQKRGAAIIEARGAS 237 (326)
T ss_pred HHHHHHHHHhCcChHHeEEeEEEECCcCceeeccccCEE----CCEEHHHHccchhhHHHHHHHHHHhhHHHHHhCcCCc
Confidence 999999999999999999987899999999999999999 9999999987767777899999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHcCCCCCcEEEEEEeecCCCCCCCCeEEEEeEEEeCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 019990 243 SALSAASSACDHIRDWVLGTPKGTWVSMGVYSDGSYGIPEGLIYSFPVTCEKGEWSIVKGLKVDEFSRAKMDATAEELAE 322 (332)
Q Consensus 243 ~~~~~a~a~~~~i~~~~~~~~~~~i~~~~v~~~g~yg~~~~~~~s~Pv~~~~G~~~~~~~~~l~~~E~~~l~~s~~~i~~ 322 (332)
+|.++++++++++.+++.++++++|+|+|++++|+||+|+++|||+||++|+|+++++++++|+++|+++|++|++.|++
T Consensus 238 ~~~~a~~~~~~iv~ail~~~~~~~i~~~sv~~~g~ygi~~~v~~s~P~~ig~Gv~~iv~~l~L~~~E~~~l~~s~~~l~~ 317 (326)
T PRK05442 238 SAASAANAAIDHVRDWVLGTPEGDWVSMGVPSDGSYGIPEGLIFGFPVTCENGEYEIVQGLEIDDFSREKIDATLAELEE 317 (326)
T ss_pred cHHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCccCCcCCeEEEEEEEEcCcEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 98765554688888888753268999999999999999889999999999999999976799999999999999999999
Q ss_pred HHHHHhhhh
Q 019990 323 EKTLAYSCL 331 (332)
Q Consensus 323 ~~~~~~~~~ 331 (332)
+.+.+...|
T Consensus 318 ~~~~~~~~~ 326 (326)
T PRK05442 318 ERDAVKHLL 326 (326)
T ss_pred HHHHHHhhC
Confidence 999886654
No 2
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=100.00 E-value=1.2e-68 Score=490.89 Aligned_cols=320 Identities=65% Similarity=1.013 Sum_probs=290.2
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCC
Q 019990 3 KNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDV 82 (332)
Q Consensus 3 ~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (332)
++|.||+|+||+|+||+++++.|+.+++++.+...+++|+|++++.+++.|.++|+.|+..+...++....+.+++++||
T Consensus 1 ~~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~da 80 (323)
T TIGR01759 1 KKPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVATTDPEEAFKDV 80 (323)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEecChHHHhCCC
Confidence 47899999997799999999999998887655556999999976545689999999998755555556666778999999
Q ss_pred cEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCC-CCCCCcEEEeecccH
Q 019990 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAP-SIPAKNITCLTRLDH 161 (332)
Q Consensus 83 DiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~-~~~~~~i~~~t~l~~ 161 (332)
|+||++||.+++++++|.+++..|+++++++++.++++++|+++++++|||+|+|+++++++ + ++|++|++|+|.||+
T Consensus 81 DvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~k~-s~g~p~~rViG~t~LDs 159 (323)
T TIGR01759 81 DAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPANTNALIASKN-APDIPPKNFSAMTRLDH 159 (323)
T ss_pred CEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHHHHH-cCCCCHHHEEEeeHHHH
Confidence 99999999999999999999999999999999999999833999999999999999999998 6 999999877899999
Q ss_pred HHHHHHHHHHcCCCCCCeeeeEEEecCCCceeecccCcccccCCCCcchhhhccccccchhHHHHHHHhhHHHHHHhcCC
Q 019990 162 NRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIKARKL 241 (332)
Q Consensus 162 ~r~~~~~a~~~~v~~~~v~~~~V~G~hg~~~v~~~s~~~v~~~~~~~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~~~g~ 241 (332)
.|+++++|+++|++|++|+.++||||||++++|+||++++ +|+|+.+++.++.|+.+++.+++++++++|++.||+
T Consensus 160 ~R~r~~la~~l~v~~~~V~~~~V~GeHG~s~v~~~S~~~v----~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~kG~ 235 (323)
T TIGR01759 160 NRAKYQLAAKAGVPVSDVKNVIIWGNHSNTQVPDFTHATV----DGRPVKEVIKDDKWLEGEFIPTVQQRGAAVIEARGA 235 (323)
T ss_pred HHHHHHHHHHhCcChHHeEEeEEEecCCCceeeccccCEE----CCccHHHHhcchhhHHHHHHHHHHhhHHHHHhccCC
Confidence 9999999999999999997777899999999999999999 999999998776676789999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHcCCCCCcEEEEEEeecC-CCCCCCCeEEEEeEEEe-CCeEEEecCCCCCHHHHHHHHHHHHH
Q 019990 242 SSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDG-SYGIPEGLIYSFPVTCE-KGEWSIVKGLKVDEFSRAKMDATAEE 319 (332)
Q Consensus 242 ~~~~~~a~a~~~~i~~~~~~~~~~~i~~~~v~~~g-~yg~~~~~~~s~Pv~~~-~G~~~~~~~~~l~~~E~~~l~~s~~~ 319 (332)
|+|+++|+++++++.+++.+.++++++|+|++++| +||+|+++|||+||++| +|+++++++++|+++|+++|++|++.
T Consensus 236 t~~~~~a~a~~~iv~ail~~~~~~~v~~~s~~~~g~~Yg~~~~v~~s~P~~lg~~Gv~~iv~~l~L~~~E~~~l~~sa~~ 315 (323)
T TIGR01759 236 SSAASAANAAIDHVRDWVTGTPEGDWVSMGVYSDGNPYGIPEGIIFSFPVTCKGDGEWEIVEGLPLDDFVRGKLDATEDE 315 (323)
T ss_pred cchHHHHHHHHHHHHHHHcCCCCCcEEEEEEEeCCcccCCCCCeEEEEEEEEcCCeeEEEcCCCCCCHHHHHHHHHHHHH
Confidence 99888889999988888775323889999999999 99998899999999999 99999996699999999999999999
Q ss_pred HHHHHHHH
Q 019990 320 LAEEKTLA 327 (332)
Q Consensus 320 i~~~~~~~ 327 (332)
|+++++++
T Consensus 316 lk~~~~~~ 323 (323)
T TIGR01759 316 LLEEKEEA 323 (323)
T ss_pred HHHHHhcC
Confidence 99998763
No 3
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=100.00 E-value=5.4e-67 Score=486.45 Aligned_cols=324 Identities=43% Similarity=0.700 Sum_probs=293.1
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCC
Q 019990 3 KNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDV 82 (332)
Q Consensus 3 ~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (332)
+++.||+||||+|+||+++++.|+.+++++.+.+..++|+|++.+.++++|.++||.|+.+++..++....+.+++++||
T Consensus 42 ~~p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~~y~~~kda 121 (387)
T TIGR01757 42 KKTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGIDPYEVFEDA 121 (387)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecCCHHHhCCC
Confidence 35789999997799999999999999988755556788886555567899999999998765555666566678999999
Q ss_pred cEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCc-EEEeecccH
Q 019990 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDH 161 (332)
Q Consensus 83 DiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~-i~~~t~l~~ 161 (332)
|+||++||.|++++++|.+++..|+++++++++.+.++++|++++|++|||+|++++++++. ++++|++ |+++|.||+
T Consensus 122 DIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNPvDv~t~v~~k~-sg~~~~rviG~gT~LDs 200 (387)
T TIGR01757 122 DWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGNPCNTNALIAMKN-APNIPRKNFHALTRLDE 200 (387)
T ss_pred CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCcHHHHHHHHHHH-cCCCcccEEEecchhHH
Confidence 99999999999999999999999999999999999998768999999999999999999998 6777776 789999999
Q ss_pred HHHHHHHHHHcCCCCCCeeeeEEEecCCCceeecccCcccccCCCCcchhhhccccccchhHHHHHHHhhHHHHHHhcCC
Q 019990 162 NRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIKARKL 241 (332)
Q Consensus 162 ~r~~~~~a~~~~v~~~~v~~~~V~G~hg~~~v~~~s~~~v~~~~~~~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~~~g~ 241 (332)
.|+++++|+++++++++|+..+||||||++++|+||++++ +|+|+.+++.++.|.+++|.+.+++++++|++.||+
T Consensus 201 aR~r~~LA~~l~v~~~~V~~~~V~GeHGds~vp~~S~a~V----~G~pl~~~~~~~~~~~~ei~~~v~~~g~eIi~~KG~ 276 (387)
T TIGR01757 201 NRAKCQLALKSGKFYTSVSNVTIWGNHSTTQVPDFVNAKI----GGRPAKEVIKDTKWLEEEFTPTVQKRGGALIKKWGR 276 (387)
T ss_pred HHHHHHHHHHHCcChhHcceeEEEecCCCcEEecceeeEE----CCEEhHHhcccccchHHHHHHHHHHHHHHHHhccCc
Confidence 9999999999999999996445799999999999999999 999999998776787889999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHcCCCCCcEEEEEEeecCC-CCCCCCeEEEEeEEEe-CCeEEEecCCCCCHHHHHHHHHHHHH
Q 019990 242 SSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDGS-YGIPEGLIYSFPVTCE-KGEWSIVKGLKVDEFSRAKMDATAEE 319 (332)
Q Consensus 242 ~~~~~~a~a~~~~i~~~~~~~~~~~i~~~~v~~~g~-yg~~~~~~~s~Pv~~~-~G~~~~~~~~~l~~~E~~~l~~s~~~ 319 (332)
|+++++|.++++++.+|+.|.|+++|+|+|++++|+ ||+++|+|||+||+++ +|+|+++.+++|+++|+++|++|++.
T Consensus 277 t~~~s~a~ai~~~i~ai~~g~d~~~il~vsv~~~Ge~YGi~~gv~~S~Pvvig~~Gv~~Iv~~l~L~~~E~~~l~~Sa~~ 356 (387)
T TIGR01757 277 SSAASTAVSIADAIKSLVVPTPEGDWFSTGVYTDGNPYGIAEGLVFSMPCRSKGDGDYELATDVSMDDFLRERIRKSEDE 356 (387)
T ss_pred hhHHHHHHHHHHHHHHHhcCCCCCeEEEEEEEeCCcccCCCCCEEEEEEEEEeCCEEEEECCCCCCCHHHHHHHHHHHHH
Confidence 988888999999999999777789999999999997 9988899999999999 99999963599999999999999999
Q ss_pred HHHHHHHHhhhh
Q 019990 320 LAEEKTLAYSCL 331 (332)
Q Consensus 320 i~~~~~~~~~~~ 331 (332)
|+++.+.+...+
T Consensus 357 L~~e~~~~~~~~ 368 (387)
T TIGR01757 357 LLKEKECVAHLI 368 (387)
T ss_pred HHHHHHHHHHhh
Confidence 999999887655
No 4
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=100.00 E-value=3.7e-67 Score=471.48 Aligned_cols=307 Identities=32% Similarity=0.455 Sum_probs=280.3
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeC-CHHHHhCCCcE
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATT-DVVEACKDVNI 84 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~-~~~~a~~~aDi 84 (332)
+||+|+|| |+||+++++.|+.+++.. +++|+|+. ++.++|.++||.|+..+...+..... ..+++|+++|+
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~-----el~LiDi~--~~~~~G~a~DL~~~~~~~~~~~~i~~~~~y~~~~~aDi 72 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGS-----ELVLIDIN--EEKAEGVALDLSHAAAPLGSDVKITGDGDYEDLKGADI 72 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccc-----eEEEEEcc--cccccchhcchhhcchhccCceEEecCCChhhhcCCCE
Confidence 58999996 999999999997776643 99999997 36789999999998766554444443 33788999999
Q ss_pred EEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCc-EEEeecccHHH
Q 019990 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNR 163 (332)
Q Consensus 85 Vi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~-i~~~t~l~~~r 163 (332)
|+++||.||+||++|.|++..|+.+++++++++.+++ |+++++++|||+|+++|+++++ +++|+++ |+++|.||+.|
T Consensus 73 VvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~-~d~ivlVvtNPvD~~ty~~~k~-sg~p~~rvig~gt~LDsaR 150 (313)
T COG0039 73 VVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYA-PDAIVLVVTNPVDILTYIAMKF-SGFPKNRVIGSGTVLDSAR 150 (313)
T ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhC-CCeEEEEecCcHHHHHHHHHHh-cCCCccceecccchHHHHH
Confidence 9999999999999999999999999999999999998 8999999999999999999998 8899988 88999999999
Q ss_pred HHHHHHHHcCCCCCCeeeeEEEecCCCceeecccCcccccCCCCcchhhhcc-ccccchhHHHHHHHhhHHHHHHhcCCc
Q 019990 164 AMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVA-DDNWLNTEFITTVQQRGAAIIKARKLS 242 (332)
Q Consensus 164 ~~~~~a~~~~v~~~~v~~~~V~G~hg~~~v~~~s~~~v~~~~~~~p~~~~~~-~~~~~~~~~~~~v~~~~~~i~~~~g~~ 242 (332)
|++++|+++|+++++|+.+ |+|+||+++||+||++++ +|+|+.++++ .+.|+.+++.+++|+++++|++.||..
T Consensus 151 ~~~~lae~~~v~~~~V~~~-ViGeHGdt~vp~~S~a~v----~G~pl~~~~~~~~~~~~~~i~~~v~~~g~eII~~kG~~ 225 (313)
T COG0039 151 FRTFLAEKLGVSPKDVHAY-VIGEHGDTMVPLWSQATV----GGKPLEELLKEDTEEDLEELIERVRNAGAEIIEAKGAG 225 (313)
T ss_pred HHHHHHHHhCCChhHceee-EeccCCCceEEeeeeeeE----CCEEHHHHhhcccHhHHHHHHHHHHhhHHHHHHccCcc
Confidence 9999999999999999997 579999999999999999 9999999998 567888999999999999999999765
Q ss_pred chHHHHHHHHHHHHHHHcCCCCCcEEEEEEeecCCCCCCCCeEEEEeEEEe-CCeEEEecCCCCCHHHHHHHHHHHHHHH
Q 019990 243 SALSAASSACDHIRDWVLGTPKGTWVSMGVYSDGSYGIPEGLIYSFPVTCE-KGEWSIVKGLKVDEFSRAKMDATAEELA 321 (332)
Q Consensus 243 ~~~~~a~a~~~~i~~~~~~~~~~~i~~~~v~~~g~yg~~~~~~~s~Pv~~~-~G~~~~~~~~~l~~~E~~~l~~s~~~i~ 321 (332)
+++++|.+++++.++++.+ +++|+|+|++++|+||+ +++|||+|+++| +|++++++ ++|+++|+++|++|++.++
T Consensus 226 t~~~~A~a~a~~~~ail~d--~~~vl~~s~~l~G~yg~-~dv~~gvP~~lg~~Gv~~iie-~~l~~~E~~~l~~s~~~lk 301 (313)
T COG0039 226 TYYGPAAALARMVEAILRD--EKRVLPVSVYLDGEYGV-EDVYFGVPAVLGKNGVEEILE-LLLSDDEQEKLDKSAEELK 301 (313)
T ss_pred chhhHHHHHHHHHHHHHcC--CCceEEEEEeecCccCc-CCeEEEeeEEEcCCCcEEEec-CCCCHHHHHHHHHHHHHHH
Confidence 7789999999988887774 58999999999999995 899999999999 99999995 9999999999999999999
Q ss_pred HHHHHHhhhh
Q 019990 322 EEKTLAYSCL 331 (332)
Q Consensus 322 ~~~~~~~~~~ 331 (332)
+.++.+..++
T Consensus 302 ~~i~~~~~~~ 311 (313)
T COG0039 302 KNIELVKELV 311 (313)
T ss_pred HHHHHHHHhh
Confidence 9999988775
No 5
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=100.00 E-value=9.1e-66 Score=484.67 Aligned_cols=321 Identities=42% Similarity=0.659 Sum_probs=289.9
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCe--EEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhC
Q 019990 3 KNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPV--ILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACK 80 (332)
Q Consensus 3 ~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~--~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~ 80 (332)
+++.||+||||+|+||+++++.|+.+++++.+... +++++|++. ++++|.++||.|..+++..++....+.+++++
T Consensus 98 ~~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~--~~a~G~amDL~daa~~~~~~v~i~~~~ye~~k 175 (444)
T PLN00112 98 KKLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSK--QALEGVAMELEDSLYPLLREVSIGIDPYEVFQ 175 (444)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCc--chhHHHHHHHHHhhhhhcCceEEecCCHHHhC
Confidence 35789999998799999999999998666544322 899999864 68999999999987665556765666789999
Q ss_pred CCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHh-hcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCc-EEEeec
Q 019990 81 DVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEK-HAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTR 158 (332)
Q Consensus 81 ~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~-~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~-i~~~t~ 158 (332)
|||+||++||.|+++|++|.+++..|+++++++++.+.+ ++ |++++|++|||+|+|++++++. +++++++ |+++|.
T Consensus 176 daDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~-p~~ivIVVsNPvDv~t~v~~k~-sg~~~~rViGtgT~ 253 (444)
T PLN00112 176 DAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVAS-RNVKVIVVGNPCNTNALICLKN-APNIPAKNFHALTR 253 (444)
T ss_pred cCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEEcCCcHHHHHHHHHHH-cCCCCcceEEeecc
Confidence 999999999999999999999999999999999999999 45 8999999999999999999998 6777766 889999
Q ss_pred ccHHHHHHHHHHHcCCCCCCeeeeEEEecCCCceeecccCcccccCCCCcchhhhccccccchhHHHHHHHhhHHHHHHh
Q 019990 159 LDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIKA 238 (332)
Q Consensus 159 l~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg~~~v~~~s~~~v~~~~~~~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~~ 238 (332)
||+.|+++++|+++|+++++|+..+||||||+++||+||++++ +|+|+.+++.+++|++++|.+++++++++|++.
T Consensus 254 LDsaR~r~~LA~~l~V~~~~V~~~~V~GeHGdsqvp~wS~a~V----~G~pl~e~i~~~~~~~~ei~~~v~~~g~~Ii~~ 329 (444)
T PLN00112 254 LDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKI----NGLPVKEVITDHKWLEEEFTPKVQKRGGVLIKK 329 (444)
T ss_pred HHHHHHHHHHHHHhCcCHHHcccceEEecCCCceeeccceeEE----CCccHHHhhccccchHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999997756799999999999999999 999999998887788899999999999999999
Q ss_pred cCCcchHHHHHHHHHHHHHHHcCCCCCcEEEEEEeecC-CCCCCCCeEEEEeEEEe-CCeEEEecCCCCCHHHHHHHHHH
Q 019990 239 RKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDG-SYGIPEGLIYSFPVTCE-KGEWSIVKGLKVDEFSRAKMDAT 316 (332)
Q Consensus 239 ~g~~~~~~~a~a~~~~i~~~~~~~~~~~i~~~~v~~~g-~yg~~~~~~~s~Pv~~~-~G~~~~~~~~~l~~~E~~~l~~s 316 (332)
||+++++++|.++++++.+|+.+.|+++|+|+|++++| +||+++|+|||+||++| +|+++++++++|+++|+++|++|
T Consensus 330 kG~t~~~s~a~ai~~~I~ail~~~d~~~vlpvsv~l~G~~YGi~~dv~~SvPvvig~~Gv~~Iv~el~L~~~E~~~l~~S 409 (444)
T PLN00112 330 WGRSSAASTAVSIADAIKSLVTPTPEGDWFSTGVYTDGNPYGIAEGLVFSMPCRSKGDGDYEIVKDVEIDDYLRERIKKS 409 (444)
T ss_pred cCchhHHHHHHHHHHHHHHHHcCCCCCeEEEEEEEeCCcccCCCCCeEEEeEEEEeCCeeEEECCCCCCCHHHHHHHHHH
Confidence 99888888899999999999976678999999999999 59988899999999999 99999995599999999999999
Q ss_pred HHHHHHHHHHHhhhh
Q 019990 317 AEELAEEKTLAYSCL 331 (332)
Q Consensus 317 ~~~i~~~~~~~~~~~ 331 (332)
+++|.++.+.+...+
T Consensus 410 a~~L~~e~~~~~~~~ 424 (444)
T PLN00112 410 EAELLAEKRCVAHLT 424 (444)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999888776543
No 6
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1.1e-65 Score=472.17 Aligned_cols=318 Identities=57% Similarity=0.886 Sum_probs=287.6
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
+|+||+|+||+|+||+++++.|+..++++.+...+++|+|++++.+++.|.++|+.|+..++..++....+.+++++|||
T Consensus 1 ~p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daD 80 (322)
T cd01338 1 KPVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDPNVAFKDAD 80 (322)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecCcHHHhCCCC
Confidence 47899999977999999999999998887556679999999765566899999999987655445666667789999999
Q ss_pred EEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCC-CCCCCcEEEeecccHH
Q 019990 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAP-SIPAKNITCLTRLDHN 162 (332)
Q Consensus 84 iVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~-~~~~~~i~~~t~l~~~ 162 (332)
+||++||.+++++++|.+++..|+++++++++.++++++|+++++++|||+|++++++++. + ++|+++++|.|++|++
T Consensus 81 ivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~-sg~~p~~~ViG~t~LDs~ 159 (322)
T cd01338 81 WALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKN-APDIPPDNFTAMTRLDHN 159 (322)
T ss_pred EEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHH-cCCCChHheEEehHHHHH
Confidence 9999999999999999999999999999999999999844999999999999999999998 6 5999998888999999
Q ss_pred HHHHHHHHHcCCCCCCeeeeEEEecCCCceeecccCcccccCCCCcchhhhccccccchhHHHHHHHhhHHHHHHhcCCc
Q 019990 163 RAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIKARKLS 242 (332)
Q Consensus 163 r~~~~~a~~~~v~~~~v~~~~V~G~hg~~~v~~~s~~~v~~~~~~~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~~~g~~ 242 (332)
|+++.+|+++|+++.+|++++|||+||++++|+||++.+ +|+|+.+++.+.+|..++|.+++++++++|++.||+|
T Consensus 160 Rl~~~la~~lgv~~~~v~~~~V~GeHG~s~vp~~S~~~v----~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~kG~t 235 (322)
T cd01338 160 RAKSQLAKKAGVPVTDVKNMVIWGNHSPTQYPDFTNATI----GGKPAAEVINDRAWLEDEFIPTVQKRGAAIIKARGAS 235 (322)
T ss_pred HHHHHHHHHhCcChhHeEEEEEEeCCcccEEEehhhcEE----CCEeHHHhcChHhhHHHHHHHHHHhhHHHHHhCcCCc
Confidence 999999999999999999988899999999999999999 9999999887766778899999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHcCCCCCcEEEEEEeecCCCCCCCCeEEEEeEEEe-CCeEEEecCCCCCHHHHHHHHHHHHHHH
Q 019990 243 SALSAASSACDHIRDWVLGTPKGTWVSMGVYSDGSYGIPEGLIYSFPVTCE-KGEWSIVKGLKVDEFSRAKMDATAEELA 321 (332)
Q Consensus 243 ~~~~~a~a~~~~i~~~~~~~~~~~i~~~~v~~~g~yg~~~~~~~s~Pv~~~-~G~~~~~~~~~l~~~E~~~l~~s~~~i~ 321 (332)
+|.++++++++++.+++.+.++++++|+|++++|+||+|+++|||+||++| +|+.++++ ++|+++|+++|++|++.|+
T Consensus 236 ~~~~~a~a~~~iv~ail~~~~~~~i~~~sv~~~g~yg~~~~v~~s~P~~ig~~Gv~~i~~-l~L~~~E~~~l~~s~~~l~ 314 (322)
T cd01338 236 SAASAANAAIDHMRDWVLGTPEGDWFSMAVPSDGSYGIPEGLIFSFPVRSKGGGYEIVEG-LEIDDFAREKIDATLAELL 314 (322)
T ss_pred cHHHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCccCCCCCeEEEEEEEEeCCEEEEEeC-CCCCHHHHHHHHHHHHHHH
Confidence 887654799998888887543369999999999999998899999999999 89888884 9999999999999999999
Q ss_pred HHHHHH
Q 019990 322 EEKTLA 327 (332)
Q Consensus 322 ~~~~~~ 327 (332)
++.+++
T Consensus 315 ~~~~~~ 320 (322)
T cd01338 315 EEREAV 320 (322)
T ss_pred HHHHHh
Confidence 988765
No 7
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=3.4e-65 Score=470.25 Aligned_cols=320 Identities=70% Similarity=1.062 Sum_probs=286.3
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
+|.||+||||+|+||+++++.|+..++++++...+++|+|++.+.+++.+..+|+.|+..++..++....++++++++||
T Consensus 1 ~~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aD 80 (325)
T cd01336 1 EPIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVD 80 (325)
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCCC
Confidence 47899999988999999999999888765333348999999765456788889999986555557776678889999999
Q ss_pred EEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCcEEEeecccHHH
Q 019990 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNR 163 (332)
Q Consensus 84 iVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~i~~~t~l~~~r 163 (332)
+|||+||.+++++++|.+++..|+.+++++++.++++++|+++++++|||+|.+++++++..+++|+++|+++|.||+.|
T Consensus 81 iVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~~~~~~~~~ig~gt~LDs~R 160 (325)
T cd01336 81 VAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNALILLKYAPSIPKENFTALTRLDHNR 160 (325)
T ss_pred EEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHHHHHHHHcCCCCHHHEEeeehHHHHH
Confidence 99999999999999999999999999999999999997579999999999999999999985578888899999999999
Q ss_pred HHHHHHHHcCCCCCCeeeeEEEecCCCceeecccCcccccCCC----CcchhhhccccccchhHHHHHHHhhHHHHHHhc
Q 019990 164 AMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKG----EKPVREAVADDNWLNTEFITTVQQRGAAIIKAR 239 (332)
Q Consensus 164 ~~~~~a~~~~v~~~~v~~~~V~G~hg~~~v~~~s~~~v~~~~~----~~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~~~ 239 (332)
+++++|+++++++++|+.++||||||++++|+||++++ + |+|+.+++.++.|++++|.+++++++++|++.|
T Consensus 161 ~r~~la~~l~v~~~~v~~~~V~GeHG~s~~~~~S~~~v----~~~~~g~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~~ 236 (325)
T cd01336 161 AKSQIALKLGVPVSDVKNVIIWGNHSSTQYPDVNHATV----ELNGKGKPAREAVKDDAWLNGEFISTVQKRGAAVIKAR 236 (325)
T ss_pred HHHHHHHHhCcChhhceEeEEEEcCCCCeeecccccee----ecCCCCccHHHHhcccchhHHHHHHHHHhhHHHHHHcc
Confidence 99999999999999998777899999999999999999 8 999999987766778899999999999999986
Q ss_pred CCcchHHHHHHHHHHHHHHHcCCCCCcEEEEEEeecCCCCCCCCeEEEEeEEEe-CCeEEEecCCCCCHHHHHHHHHHHH
Q 019990 240 KLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDGSYGIPEGLIYSFPVTCE-KGEWSIVKGLKVDEFSRAKMDATAE 318 (332)
Q Consensus 240 g~~~~~~~a~a~~~~i~~~~~~~~~~~i~~~~v~~~g~yg~~~~~~~s~Pv~~~-~G~~~~~~~~~l~~~E~~~l~~s~~ 318 (332)
++++++++|.++++++.+++.++++++++|+|++++|+||+++++|||+||++| +|+.++++ ++|+++|+++|++|++
T Consensus 237 ~g~t~~~~a~~~~~i~~ail~~~~~~~v~~vs~~~~g~yg~~~~v~~s~P~~ig~~Gv~~i~~-~~L~~~E~~~l~~s~~ 315 (325)
T cd01336 237 KLSSAMSAAKAICDHVHDWWFGTPEGEFVSMGVYSDGSYGVPEGLIFSFPVTCKNGKWKIVQG-LSIDDFSREKIDATAK 315 (325)
T ss_pred ccchHHHHHHHHHHHHHHHHcCCCCCeEEEEEEecCCCcCCCCceEEEEEEEEeCCEEEEecC-CCCCHHHHHHHHHHHH
Confidence 656677889999999988887644589999999999999998899999999999 88888884 9999999999999999
Q ss_pred HHHHHHHHHh
Q 019990 319 ELAEEKTLAY 328 (332)
Q Consensus 319 ~i~~~~~~~~ 328 (332)
.|+++++.++
T Consensus 316 ~l~~e~~~~~ 325 (325)
T cd01336 316 ELVEEKETAL 325 (325)
T ss_pred HHHHHHHhhC
Confidence 9999998763
No 8
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=3e-65 Score=469.37 Aligned_cols=317 Identities=60% Similarity=0.916 Sum_probs=282.5
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcEE
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIA 85 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDiV 85 (332)
.||+||||+|+||+++++.|+.+++++.+...+++|+|++.+.+++++.++|+.|...+...++....+.+++++|||+|
T Consensus 1 ~KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~aDiV 80 (323)
T cd00704 1 LHVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVITTDPEEAFKDVDVA 80 (323)
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEecChHHHhCCCCEE
Confidence 38999998899999999999988887643445799999975335788999999998755554555556778999999999
Q ss_pred EEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCC-CCCCcEEEeecccHHHH
Q 019990 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPS-IPAKNITCLTRLDHNRA 164 (332)
Q Consensus 86 i~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~-~~~~~i~~~t~l~~~r~ 164 (332)
||+||.|++++++|.+++..|+++++++++.++++++|+++++++|||+|++++++++. ++ +|++|++|+|.||+.|+
T Consensus 81 VitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~-sg~~p~~~vig~t~LDs~R~ 159 (323)
T cd00704 81 ILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNPANTNALIALKN-APNLPPKNFTALTRLDHNRA 159 (323)
T ss_pred EEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHHHHHH-cCCCCHHHEEEeeHHHHHHH
Confidence 99999999999999999999999999999999999548999999999999999999998 77 69999878899999999
Q ss_pred HHHHHHHcCCCCCCeeeeEEEecCCCceeecccCcccccCCCCcchhhhc---cccccchhHHHHHHHhhHHHHHHhcCC
Q 019990 165 MGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAV---ADDNWLNTEFITTVQQRGAAIIKARKL 241 (332)
Q Consensus 165 ~~~~a~~~~v~~~~v~~~~V~G~hg~~~v~~~s~~~v~~~~~~~p~~~~~---~~~~~~~~~~~~~v~~~~~~i~~~~g~ 241 (332)
++++|++++++|++|+.++||||||++++|+||++++ +|+|+.++. .+++|..++|.+++++++++|++.||+
T Consensus 160 r~~la~~l~v~~~~V~~~~V~GeHG~s~v~~~S~~~v----~g~~~~~~~~~~~~~~~~~~~i~~~v~~~~~~Ii~~kg~ 235 (323)
T cd00704 160 KAQVARKLGVRVSDVKNVIIWGNHSNTQVPDLSNAVV----YGPGGTEWVLDLLDEEWLNDEFVKTVQKRGAAIIKKRGA 235 (323)
T ss_pred HHHHHHHhCcCHHHceeeeEEecccCceeecccccee----cCccHHHhcccccChHHHHHHHHHHHHhhHHHHHhccCc
Confidence 9999999999999997666899999999999999999 999998875 334676789999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHcCCCCCcEEEEEEeecCCC-CCCCCeEEEEeEEEe-CCeEEEecCCCCCHHHHHHHHHHHHH
Q 019990 242 SSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDGSY-GIPEGLIYSFPVTCE-KGEWSIVKGLKVDEFSRAKMDATAEE 319 (332)
Q Consensus 242 ~~~~~~a~a~~~~i~~~~~~~~~~~i~~~~v~~~g~y-g~~~~~~~s~Pv~~~-~G~~~~~~~~~l~~~E~~~l~~s~~~ 319 (332)
|+|+++|+++++++.+++.+.+.++++|||++++|+| |+|+++|||+||++| +|+.+++ +++|+++|+++|++|++.
T Consensus 236 t~~~~~a~a~~~iv~ail~~~~~~~v~~~s~~~~g~y~gi~~~v~~s~P~~ig~~Gv~~v~-~l~L~~~E~~~l~~s~~~ 314 (323)
T cd00704 236 SSAASAAKAIADHVKDWLFGTPPGEIVSMGVYSPGNPYGIPPGIVFSFPCTCKGGGWHVVE-DLKLNDWLREKLKATEEE 314 (323)
T ss_pred chhHHHHHHHHHHHHHHHhCCCCCcEEEEEEEeCCccCCCCCceEEEEEEEEcCCEEEEec-CCCCCHHHHHHHHHHHHH
Confidence 9987789999999998887542238999999999999 998899999999999 8888887 599999999999999999
Q ss_pred HHHHHHHHh
Q 019990 320 LAEEKTLAY 328 (332)
Q Consensus 320 i~~~~~~~~ 328 (332)
|+++.+.++
T Consensus 315 l~~~~~~~~ 323 (323)
T cd00704 315 LIEEKEIAL 323 (323)
T ss_pred HHHHHHhhC
Confidence 999988764
No 9
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=100.00 E-value=4.7e-64 Score=461.63 Aligned_cols=318 Identities=71% Similarity=1.106 Sum_probs=281.5
Q ss_pred EEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcEEE
Q 019990 7 RVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAV 86 (332)
Q Consensus 7 kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDiVi 86 (332)
||+||||+|+||+++++.|...++++.++..+++|+|++++.+++.+.++|+.|...+....+....+.++++++||+||
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~~aDiVV 80 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPLLDGVVPTHDPAVAFTDVDVAI 80 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhcccchhcCceeccCChHHHhCCCCEEE
Confidence 69999988999999999999988875433347999999765556889999999987554444544446689999999999
Q ss_pred EecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCcEEEeecccHHHHHH
Q 019990 87 MVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRAMG 166 (332)
Q Consensus 87 ~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~i~~~t~l~~~r~~~ 166 (332)
|+||.+++++++|.+++..|+++++++++.++++++|+++++++|||+|+|+++++++...+|++.|+++|.||+.|+++
T Consensus 81 itAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~~~sg~~~~~vig~gt~LDs~R~r~ 160 (324)
T TIGR01758 81 LVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPANTNALVLSNYAPSIPPKNFSALTRLDHNRALA 160 (324)
T ss_pred EcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHHHHHcCCCCcceEEEeeehHHHHHHH
Confidence 99999999999999999999999999999999995489999999999999999999983345555689999999999999
Q ss_pred HHHHHcCCCCCCeeeeEEEecCCCceeecccCcccccCCC-C---cchhhhccccccchhHHHHHHHhhHHHHHHhcCCc
Q 019990 167 QISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKG-E---KPVREAVADDNWLNTEFITTVQQRGAAIIKARKLS 242 (332)
Q Consensus 167 ~~a~~~~v~~~~v~~~~V~G~hg~~~v~~~s~~~v~~~~~-~---~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~~~g~~ 242 (332)
++|+++++++++|+..+||||||++++|+||++++ + | +|+.+++.++.|+++++.+++++++++|++.||++
T Consensus 161 ~la~~l~v~~~~V~~~~V~GeHG~s~v~~~S~~~v----~~g~~~~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k~~~ 236 (324)
T TIGR01758 161 QVAERAGVPVSDVKNVIIWGNHSSTQYPDVNHATV----TKGGKQKPVREAIKDDAYLDGEFITTVQQRGAAIIRARKLS 236 (324)
T ss_pred HHHHHhCCChhhceEeEEEECCCCCccccccccee----cCCCCccCHHHHhcchhhHHHHHHHHHHhCHHHHHhccCCC
Confidence 99999999999998656899999999999999999 8 9 99999987765767899999999999999988867
Q ss_pred chHHHHHHHHHHHHHHHcCCCCCcEEEEEEeecCC-CCCCCCeEEEEeEEEeCCeEEEecCCCCCHHHHHHHHHHHHHHH
Q 019990 243 SALSAASSACDHIRDWVLGTPKGTWVSMGVYSDGS-YGIPEGLIYSFPVTCEKGEWSIVKGLKVDEFSRAKMDATAEELA 321 (332)
Q Consensus 243 ~~~~~a~a~~~~i~~~~~~~~~~~i~~~~v~~~g~-yg~~~~~~~s~Pv~~~~G~~~~~~~~~l~~~E~~~l~~s~~~i~ 321 (332)
+.+++|.++++++.+++.+.|+++++|+|++++|+ ||+|+++|||+||++++|+|+++.+++|+++|+++|++|++.|+
T Consensus 237 t~~~ia~~~~~i~~ai~~~~~~~~i~~vs~~~~g~~yg~~~~v~~s~P~~ig~g~~~~i~el~L~~~E~~~l~~s~~~lk 316 (324)
T TIGR01758 237 SALSAAKAAVDQMHDWVLGTPEGTFVSMGVYSDGSPYGVPKGLIFSFPVTCKNGEWKIVEGLCVDDSSRKKLALTAKELE 316 (324)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEEEeecCCcccCCCCceEEEEEEEEcCCeEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 77888999999999888555678999999999999 99988999999999998888877679999999999999999999
Q ss_pred HHHHHHh
Q 019990 322 EEKTLAY 328 (332)
Q Consensus 322 ~~~~~~~ 328 (332)
+.++.++
T Consensus 317 ~~~~~~~ 323 (324)
T TIGR01758 317 EERDEAL 323 (324)
T ss_pred HHHHHhh
Confidence 9998874
No 10
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=9.8e-63 Score=463.68 Aligned_cols=318 Identities=35% Similarity=0.626 Sum_probs=284.9
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCC
Q 019990 3 KNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDV 82 (332)
Q Consensus 3 ~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (332)
++|.+|+||||+|.||++|+.+|+.+.++|.+.+..++|+|+..+.+++.|.++||.|+.+++..++..+++.+++++||
T Consensus 121 ~~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~~~~ea~~da 200 (452)
T cd05295 121 INPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTTDLDVAFKDA 200 (452)
T ss_pred CCceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEECCHHHhCCC
Confidence 35789999999999999999999999999999899999999965567899999999999877766676667778999999
Q ss_pred cEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCC-CcEEEEEeCChhhHHHHHHHHCCCCCCCcEEEeecccH
Q 019990 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAP-NCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDH 161 (332)
Q Consensus 83 DiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~-~~~viv~snp~~~~~~~~~~~~~~~~~~~i~~~t~l~~ 161 (332)
|+||++||.|+++|++|.++++.|+++++.+++++.+++++ ...+|+.|||+|++++++++.++++|+++|+|.+.+++
T Consensus 201 DvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD~~t~i~~k~apgiP~~rVig~gtlds 280 (452)
T cd05295 201 HVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLNLKTSILIKYAPSIPRKNIIAVARLQE 280 (452)
T ss_pred CEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHHHHcCCCCHHHEEEecchHH
Confidence 99999999999999999999999999999999999999833 45667777999999999999865999999888888999
Q ss_pred HHHHHHHHHHcCCCCCCeeeeEEEecCCCceeecccCcccccCCCC------------cchhhhccccccchhHHHHHHH
Q 019990 162 NRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGE------------KPVREAVADDNWLNTEFITTVQ 229 (332)
Q Consensus 162 ~r~~~~~a~~~~v~~~~v~~~~V~G~hg~~~v~~~s~~~v~~~~~~------------~p~~~~~~~~~~~~~~~~~~v~ 229 (332)
.|+++++|+++|+++++|+..+|||+||+++||+||+++| +| +|+.+++.+++|..+++.+.++
T Consensus 281 ~R~r~~LA~kl~V~~~~V~~~~VwGeHG~sqvpd~S~a~V----~G~~~a~~~p~~~~~pl~e~i~d~~w~~~~~~~~v~ 356 (452)
T cd05295 281 NRAKALLARKLNVNSAGIKDVIVWGNIGGNTYIDLSKARV----YRYDSAIWGPPNYSRPVLELVHDSKWINGEFVATLK 356 (452)
T ss_pred HHHHHHHHHHhCcCHHHceeeEEEEccCCceeeeeeEEEE----cccccccccccccCccHHHHhcchhhhHHHHHHHHH
Confidence 9999999999999999997777899999999999999999 65 9999998777888889999999
Q ss_pred hhHHHHHHhcCCcchHHHHHHHHHHHHHHHcCCCCCcEEEEEEeecCCCCCCCCeEEEEeEEEeCCeEEEecCCCCCHHH
Q 019990 230 QRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDGSYGIPEGLIYSFPVTCEKGEWSIVKGLKVDEFS 309 (332)
Q Consensus 230 ~~~~~i~~~~g~~~~~~~a~a~~~~i~~~~~~~~~~~i~~~~v~~~g~yg~~~~~~~s~Pv~~~~G~~~~~~~~~l~~~E 309 (332)
+++. ++|| ++++++|.|+++++++|+.++++++|+|+||+++|+||+|+|+|||+||++++|.|+++.+++|+++|
T Consensus 357 ~rg~---~rkg-sT~~siA~A~~~iv~ail~~t~~~~ilsvsv~sdG~YGip~gv~~S~Pviig~~Gve~V~~L~L~e~E 432 (452)
T cd05295 357 SLSS---SLNH-EAAISPAHAIATTLSYWYHGSPPGEIFSLGVISEGWYGIPEGIVFSMPVKFQNGSWEVVTDLELSEIL 432 (452)
T ss_pred HHHH---hccC-ChHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeeccccCCcCCEEEEEEEEEeCCeEEEEeCCCCCHHH
Confidence 9988 5555 66678899999999999987545899999999999999999999999999994445544469999999
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 019990 310 RAKMDATAEELAEEKTLAY 328 (332)
Q Consensus 310 ~~~l~~s~~~i~~~~~~~~ 328 (332)
+++|++|+++|.++.+.+.
T Consensus 433 ~~kL~~S~~eL~~E~~~~~ 451 (452)
T cd05295 433 REVLKRITSDLIQEKLVAL 451 (452)
T ss_pred HHHHHHHHHHHHHHHHhhc
Confidence 9999999999999887763
No 11
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=4.9e-62 Score=445.08 Aligned_cols=298 Identities=20% Similarity=0.315 Sum_probs=265.8
Q ss_pred EEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCC-ccceEEeCCHHHHhCCCcEE
Q 019990 7 RVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPL-LKGVVATTDVVEACKDVNIA 85 (332)
Q Consensus 7 kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~-~~~v~~~~~~~~a~~~aDiV 85 (332)
||+|+| +|+||+++++.|+.+++++ +++|+|++. ++++|.++||.|..... ..++....+.+++++|||+|
T Consensus 1 Ki~IIG-aG~VG~~~a~~l~~~~~~~-----elvL~Di~~--~~a~g~a~DL~~~~~~~~~~~~~i~~~~y~~~~~aDiv 72 (307)
T cd05290 1 KLVVIG-AGHVGSAVLNYALALGLFS-----EIVLIDVNE--GVAEGEALDFHHATALTYSTNTKIRAGDYDDCADADII 72 (307)
T ss_pred CEEEEC-CCHHHHHHHHHHHhcCCCC-----EEEEEeCCc--chhhHHHHHHHhhhccCCCCCEEEEECCHHHhCCCCEE
Confidence 799999 5999999999999888875 999999964 57899999999965322 23444444457899999999
Q ss_pred EEecCCCCCCCCC--hhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCc-EEEeecccHH
Q 019990 86 VMVGGFPRKEGME--RKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHN 162 (332)
Q Consensus 86 i~~ag~~~~~~~~--~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~-i~~~t~l~~~ 162 (332)
|++||.++++|++ |.+++..|+++++++++.+.+++ |+++++++|||+|+|++++++. +++|++| |+.+|.||+.
T Consensus 73 vitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~-p~~i~ivvsNPvDv~t~~~~k~-sg~p~~rviG~gt~LDs~ 150 (307)
T cd05290 73 VITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVT-KEAVIILITNPLDIAVYIAATE-FDYPANKVIGTGTMLDTA 150 (307)
T ss_pred EECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEecCcHHHHHHHHHHH-hCcChhheecccchHHHH
Confidence 9999999999998 69999999999999999999998 8999999999999999999998 8999999 5677999999
Q ss_pred HHHHHHHHHcCCCCCCeeeeEEEecCCCceeecccCcccccCCCCcchhhhccc---cccchhHHHHHHHhhHHHHHHhc
Q 019990 163 RAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVAD---DNWLNTEFITTVQQRGAAIIKAR 239 (332)
Q Consensus 163 r~~~~~a~~~~v~~~~v~~~~V~G~hg~~~v~~~s~~~v~~~~~~~p~~~~~~~---~~~~~~~~~~~v~~~~~~i~~~~ 239 (332)
|+++++|+++|+++.+|+++ |||+||++++|+||++++ +|+|+.+++.. +.|..+++.+++++++++|++.|
T Consensus 151 R~~~~la~~l~v~~~~V~~~-ViGeHGds~vp~wS~~~v----~g~~l~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~K 225 (307)
T cd05290 151 RLRRIVADKYGVDPKNVTGY-VLGEHGSHAFPVWSLVNI----AGLPLDELEALFGKEPIDKDELLEEVVQAAYDVFNRK 225 (307)
T ss_pred HHHHHHHHHhCCCcccEEEE-EEecCCCceEEeeeeeEE----CCEEHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999999999999997 699999999999999999 99999998752 34456899999999999999999
Q ss_pred CCcchHHHHHHHHHHHHHHHcCCCCCcEEEEEEeecCCCCCCCCeEEEEeEEEe-CCeEEEecCCCCCHHHHHHHHHHHH
Q 019990 240 KLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDGSYGIPEGLIYSFPVTCE-KGEWSIVKGLKVDEFSRAKMDATAE 318 (332)
Q Consensus 240 g~~~~~~~a~a~~~~i~~~~~~~~~~~i~~~~v~~~g~yg~~~~~~~s~Pv~~~-~G~~~~~~~~~l~~~E~~~l~~s~~ 318 (332)
|.|+|. +|.++++++.+++. |+++++|+|++.+|+||. +++|||+||+++ +|++++++ ++||++|+++|++|++
T Consensus 226 G~t~~~-ia~a~~~ii~ail~--d~~~v~~vsv~~~G~yg~-~~v~~svP~~ig~~Gv~~i~~-l~L~~~E~~~l~~s~~ 300 (307)
T cd05290 226 GWTNAG-IAKSASRLIKAILL--DERSILPVCTLLSGEYGL-SDVALSLPTVIGAKGIERVLE-IPLDEWELEKLHKSAK 300 (307)
T ss_pred CeehHH-HHHHHHHHHHHHHh--CCCeEEEEEEeeCCccCC-CCEEEEEEEEEeCCCceEecC-CCCCHHHHHHHHHHHH
Confidence 987764 57899988887665 458999999999999994 799999999999 99999995 9999999999999999
Q ss_pred HHHHHH
Q 019990 319 ELAEEK 324 (332)
Q Consensus 319 ~i~~~~ 324 (332)
.|++.+
T Consensus 301 ~i~~~~ 306 (307)
T cd05290 301 AIRETI 306 (307)
T ss_pred HHHHHh
Confidence 999865
No 12
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=100.00 E-value=1.9e-60 Score=437.29 Aligned_cols=306 Identities=24% Similarity=0.343 Sum_probs=272.3
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhC
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACK 80 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~ 80 (332)
|++.++||+|+|| |.||+++++.|+..++++ +++|+|++. ++++|.++|+.|+.... .++....+.+++++
T Consensus 2 ~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~-----el~L~D~~~--~~~~g~~~Dl~~~~~~~-~~~~i~~~~~~~~~ 72 (315)
T PRK00066 2 MKKQHNKVVLVGD-GAVGSSYAYALVNQGIAD-----ELVIIDINK--EKAEGDAMDLSHAVPFT-SPTKIYAGDYSDCK 72 (315)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHhcCCCC-----EEEEEeCCC--chhHHHHHHHHhhcccc-CCeEEEeCCHHHhC
Confidence 6677899999995 999999999999888764 899999964 57899999999986322 34454555678899
Q ss_pred CCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCcE-EEeecc
Q 019990 81 DVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRL 159 (332)
Q Consensus 81 ~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~i-~~~t~l 159 (332)
+||+||++||.|++++++|.+++..|+++++++++.+++++ |+++++++|||+|.++++++++ +++|++++ +.+|.+
T Consensus 73 ~adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~-~~~~vivvsNP~d~~~~~~~k~-sg~p~~~viG~gt~L 150 (315)
T PRK00066 73 DADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASG-FDGIFLVASNPVDILTYATWKL-SGFPKERVIGSGTSL 150 (315)
T ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccCcHHHHHHHHHHH-hCCCHHHEeecCchH
Confidence 99999999999999999999999999999999999999998 8999999999999999999998 78999996 566999
Q ss_pred cHHHHHHHHHHHcCCCCCCeeeeEEEecCCCceeecccCcccccCCCCcchhhhccccccc----hhHHHHHHHhhHHHH
Q 019990 160 DHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVADDNWL----NTEFITTVQQRGAAI 235 (332)
Q Consensus 160 ~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg~~~v~~~s~~~v~~~~~~~p~~~~~~~~~~~----~~~~~~~v~~~~~~i 235 (332)
|+.|+++++|+++|+++++|+.+ |||+||++++|+||++++ +|+|+.+++.+..|. .+++.+++++++++|
T Consensus 151 Ds~R~~~~la~~l~v~~~~V~~~-viGeHG~s~v~~~S~~~v----~g~~l~~~~~~~~~~~~~~~~~i~~~v~~~g~~i 225 (315)
T PRK00066 151 DSARFRYMLSEKLDVDPRSVHAY-IIGEHGDTEFPVWSHANV----AGVPLEEYLEENEQYDEEDLDEIFENVRDAAYEI 225 (315)
T ss_pred HHHHHHHHHHHHhCCCcccEEEE-EEecCCCcceecceeceE----CCEEHHHHhhhccCcCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999997 689999999999999999 999999997664442 457999999999999
Q ss_pred HHhcCCcchHHHHHHHHHHHHHHHcCCCCCcEEEEEEeecCCCCCCCCeEEEEeEEEe-CCeEEEecCCCCCHHHHHHHH
Q 019990 236 IKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDGSYGIPEGLIYSFPVTCE-KGEWSIVKGLKVDEFSRAKMD 314 (332)
Q Consensus 236 ~~~~g~~~~~~~a~a~~~~i~~~~~~~~~~~i~~~~v~~~g~yg~~~~~~~s~Pv~~~-~G~~~~~~~~~l~~~E~~~l~ 314 (332)
++.||+++| ++|+++++++.+++. ++++++|+|++++|+||. +++|||+||++| +|++++++ ++||++|+++|+
T Consensus 226 i~~kg~t~~-~~a~~~~~i~~ail~--~~~~v~~~sv~~~g~yg~-~~v~~S~Pv~ig~~Gv~~i~~-l~L~~~E~~~L~ 300 (315)
T PRK00066 226 IEKKGATYY-GIAMALARITKAILN--NENAVLPVSAYLEGQYGE-EDVYIGVPAVVNRNGIREIVE-LPLNDDEKQKFA 300 (315)
T ss_pred HhcCCeehH-HHHHHHHHHHHHHHc--CCCeEEEEEEEeccccCC-CCEEEEeEEEEeCCcEEEEcC-CCCCHHHHHHHH
Confidence 999998875 568888888877665 468999999999999995 899999999999 99999985 999999999999
Q ss_pred HHHHHHHHHHHHH
Q 019990 315 ATAEELAEEKTLA 327 (332)
Q Consensus 315 ~s~~~i~~~~~~~ 327 (332)
+|+++|++.++..
T Consensus 301 ~s~~~l~~~~~~~ 313 (315)
T PRK00066 301 HSADVLKEIMDEA 313 (315)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998753
No 13
>TIGR01771 L-LDH-NAD L-lactate dehydrogenase. This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.
Probab=100.00 E-value=7.9e-61 Score=436.38 Aligned_cols=293 Identities=22% Similarity=0.332 Sum_probs=263.9
Q ss_pred EEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcEEEEec
Q 019990 10 VTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVG 89 (332)
Q Consensus 10 VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDiVi~~a 89 (332)
|+| +|+||+++++.|+..++++ +++|+|++. +++.|.++||.|+..+...++....+.++++++||+||++|
T Consensus 1 iIG-aG~VG~~~a~~l~~~~l~~-----el~L~Di~~--~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daDivVita 72 (299)
T TIGR01771 1 IIG-AGNVGSSTAFALLNQGIAD-----EIVLIDINK--DKAEGEAMDLQHAASFLPTPKKIRSGDYSDCKDADLVVITA 72 (299)
T ss_pred CCC-cCHHHHHHHHHHHhcCCCC-----EEEEEeCCC--ChhhHHHHHHHHhhcccCCCeEEecCCHHHHCCCCEEEECC
Confidence 578 6999999999999888865 999999964 57899999999987655555555556678999999999999
Q ss_pred CCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCcE-EEeecccHHHHHHHH
Q 019990 90 GFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDHNRAMGQI 168 (332)
Q Consensus 90 g~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~i-~~~t~l~~~r~~~~~ 168 (332)
|.|+++|++|.+++..|+++++++++.+++++ |+++++++|||+|+++++++++ +++|++++ +.+|.||+.|+++++
T Consensus 73 g~~rk~g~~R~dll~~N~~i~~~~~~~i~~~~-p~~~vivvsNP~d~~t~~~~~~-sg~p~~~viG~gt~LDs~R~~~~l 150 (299)
T TIGR01771 73 GAPQKPGETRLELVGRNVRIMKSIVPEVVKSG-FDGIFLVATNPVDILTYVAWKL-SGFPKNRVIGSGTVLDTARLRYLL 150 (299)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHHHH-hCCCHHHEEeccchHHHHHHHHHH
Confidence 99999999999999999999999999999997 9999999999999999999998 79999995 566999999999999
Q ss_pred HHHcCCCCCCeeeeEEEecCCCceeecccCcccccCCCCcchhhhccc----cccchhHHHHHHHhhHHHHHHhcCCcch
Q 019990 169 SERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVAD----DNWLNTEFITTVQQRGAAIIKARKLSSA 244 (332)
Q Consensus 169 a~~~~v~~~~v~~~~V~G~hg~~~v~~~s~~~v~~~~~~~p~~~~~~~----~~~~~~~~~~~v~~~~~~i~~~~g~~~~ 244 (332)
|+++++++.+|+++ |||+||++++|+||++++ +|+|+.+++.+ ..|.++++.+++++++++|++.||+|+|
T Consensus 151 a~~l~v~~~~V~~~-v~GeHG~s~vp~~S~~~v----~g~pl~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~~kG~t~~ 225 (299)
T TIGR01771 151 AEKLGVDPQSVHAY-IIGEHGDSEVPVWSSATI----GGVPLLDYLKAKGTETDLDLEEIEKEVRDAAYEIINRKGATYY 225 (299)
T ss_pred HHHhCcCcCeEEEE-EEecCCCceeeceeeeEE----CCEEHHHHhhhcccccHHHHHHHHHHHHHHHHHHhhcCCeeeH
Confidence 99999999999987 699999999999999999 99999998754 2344678999999999999999997775
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEEEEeecCCCCCCCCeEEEEeEEEe-CCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 019990 245 LSAASSACDHIRDWVLGTPKGTWVSMGVYSDGSYGIPEGLIYSFPVTCE-KGEWSIVKGLKVDEFSRAKMDATAEELAE 322 (332)
Q Consensus 245 ~~~a~a~~~~i~~~~~~~~~~~i~~~~v~~~g~yg~~~~~~~s~Pv~~~-~G~~~~~~~~~l~~~E~~~l~~s~~~i~~ 322 (332)
++|+++++++.+++.+ +++++|+|++++|+||+ .++|||+||++| +|++++++ ++|+++|+++|++|++.|++
T Consensus 226 -~~a~a~~~~i~ail~d--~~~v~~~s~~~~g~yg~-~~~~~s~P~~ig~~Gv~~i~~-l~L~~~E~~~l~~s~~~ik~ 299 (299)
T TIGR01771 226 -GIGMAVARIVEAILHD--ENRVLPVSAYLDGEYGI-KDVYIGVPAVLGRNGVEEIIE-LPLSDEEKEAFQKSAETLKK 299 (299)
T ss_pred -HHHHHHHHHHHHHHcC--CCcEEEEEEEecccCCC-CCEEEEEEEEEeCCeeEEEcc-CCCCHHHHHHHHHHHHHHhC
Confidence 4678999988887764 58999999999999998 689999999999 99999995 99999999999999999873
No 14
>PLN00135 malate dehydrogenase
Probab=100.00 E-value=2.7e-60 Score=432.29 Aligned_cols=304 Identities=88% Similarity=1.284 Sum_probs=266.6
Q ss_pred HhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcEEEEecCCCCCCCCChhHHHhh
Q 019990 26 ARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSK 105 (332)
Q Consensus 26 ~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDiVi~~ag~~~~~~~~~~~~~~~ 105 (332)
+.+.++|.+.+..++|+|++++++++.|+++|+.|+..+....+....+.++++++||+||++||.+++++++|.+++..
T Consensus 3 ~~g~~~g~~~~~~l~L~D~~~~~~~a~g~~~Dl~da~~~~~~~i~~~~~~y~~~~daDiVVitAG~~~k~g~sR~dll~~ 82 (309)
T PLN00135 3 ARGVMLGPDQPVILHMLDIPPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKGVNIAVMVGGFPRKEGMERKDVMSK 82 (309)
T ss_pred ccccccCCCCeEEEEEecCcccccchhhHHHHHHhhhHHhcCCcEecCCHHHHhCCCCEEEEeCCCCCCCCCcHHHHHHH
Confidence 34556676667799999998766789999999999875544456555666899999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCc-EEEeecccHHHHHHHHHHHcCCCCCCeeeeEE
Q 019990 106 NVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERLKVHVSDVKNVII 184 (332)
Q Consensus 106 N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~-i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V 184 (332)
|+++++++++.+.+++.|+++++++|||+|+|++++++. +++|+++ |+++|.||+.|+++++|+++|+++++|+..+|
T Consensus 83 N~~I~~~i~~~i~~~~~p~aivivvsNPvDv~t~~~~~~-sg~~~~~vig~gt~LDsaR~r~~la~~l~v~~~~V~~~~V 161 (309)
T PLN00135 83 NVSIYKSQASALEKHAAPDCKVLVVANPANTNALILKEF-APSIPEKNITCLTRLDHNRALGQISERLGVPVSDVKNVII 161 (309)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEeCCcHHHHHHHHHHH-cCCCCccEEEeeehHHHHHHHHHHHHHhCcChhhceeeEE
Confidence 999999999999996238999999999999999999998 7888876 88999999999999999999999999943347
Q ss_pred EecCCCceeecccCcccccCCCCcchhhhccccccchhHHHHHHHhhHHHHHHhcCCcchHHHHHHHHHHHHHHHcCCCC
Q 019990 185 WGNHSSTQYPDVNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPK 264 (332)
Q Consensus 185 ~G~hg~~~v~~~s~~~v~~~~~~~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~~~g~~~~~~~a~a~~~~i~~~~~~~~~ 264 (332)
|||||++++|+||+++++.+.+|+|+.+++.+++|+++++.+++++++++|++.+++++++++|+++++++.+++.+.|+
T Consensus 162 lGeHG~s~v~~~S~a~v~~~~~g~p~~e~~~~~~~~~~~i~~~v~~~g~~Ii~~~kg~t~~~ia~a~~~iv~ai~~~~~~ 241 (309)
T PLN00135 162 WGNHSSTQYPDVNHATVKTPSGEKPVRELVADDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPE 241 (309)
T ss_pred EEcCCCceeeccccceEecCCCCcCHHHHhCchhhHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHhCCcC
Confidence 99999999999999999655579999998766667788999999999999999854466778899999999988885456
Q ss_pred CcEEEEEEeecCCCCCCCCeEEEEeEEEe-CCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHhhhh
Q 019990 265 GTWVSMGVYSDGSYGIPEGLIYSFPVTCE-KGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLAYSCL 331 (332)
Q Consensus 265 ~~i~~~~v~~~g~yg~~~~~~~s~Pv~~~-~G~~~~~~~~~l~~~E~~~l~~s~~~i~~~~~~~~~~~ 331 (332)
++|+|+|++++|+||+|+++|||+||+++ +|+.+++ +++|+++|+++|++|++.|+++.+.++.+|
T Consensus 242 ~~v~~vsv~~~g~YGi~~~v~~s~P~vlg~~gve~v~-~l~L~~~E~~~l~~S~~~lk~~~~~~~~~~ 308 (309)
T PLN00135 242 GTWVSMGVYSDGSYGVPPGLIYSFPVTCEKGEWSIVQ-GLSIDEFSRKKMDATAKELKEEKELAYSCL 308 (309)
T ss_pred CeEEEEEEEecCccCCcCCeEEEEEEEEECCEEEEec-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999998899999999999 5555555 599999999999999999999999998877
No 15
>PLN02602 lactate dehydrogenase
Probab=100.00 E-value=1.3e-59 Score=434.74 Aligned_cols=302 Identities=22% Similarity=0.357 Sum_probs=266.3
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCc-cceEEeCCHHHHhCCCcE
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLL-KGVVATTDVVEACKDVNI 84 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~-~~v~~~~~~~~a~~~aDi 84 (332)
+||+|+| +|.||+++++.|+..++++ +++|+|++. +++.|.++||.|+..... ..+....+ +++++|||+
T Consensus 38 ~KI~IIG-aG~VG~~~a~~l~~~~l~~-----el~LiDi~~--~~~~g~a~DL~~~~~~~~~~~i~~~~d-y~~~~daDi 108 (350)
T PLN02602 38 TKVSVVG-VGNVGMAIAQTILTQDLAD-----ELALVDVNP--DKLRGEMLDLQHAAAFLPRTKILASTD-YAVTAGSDL 108 (350)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCCC-----EEEEEeCCC--chhhHHHHHHHhhhhcCCCCEEEeCCC-HHHhCCCCE
Confidence 6999999 5999999999999888865 999999964 578999999999863222 34443334 567999999
Q ss_pred EEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCcE-EEeecccHHH
Q 019990 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDHNR 163 (332)
Q Consensus 85 Vi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~i-~~~t~l~~~r 163 (332)
||++||.++++|++|.+++..|+++++++++.+++++ |+++++++|||+|+++++++++ +++|++|+ +.+|.||+.|
T Consensus 109 VVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~-p~~ivivvtNPvdv~t~~~~k~-sg~p~~rviG~gt~LDs~R 186 (350)
T PLN02602 109 CIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKYS-PDTILLIVSNPVDVLTYVAWKL-SGFPANRVIGSGTNLDSSR 186 (350)
T ss_pred EEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCchHHHHHHHHHH-hCCCHHHEEeecchHHHHH
Confidence 9999999999999999999999999999999999998 8999999999999999999998 68999996 5558999999
Q ss_pred HHHHHHHHcCCCCCCeeeeEEEecCCCceeecccCcccccCCCCcchhhhcccc--cc---chhHHHHHHHhhHHHHHHh
Q 019990 164 AMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVADD--NW---LNTEFITTVQQRGAAIIKA 238 (332)
Q Consensus 164 ~~~~~a~~~~v~~~~v~~~~V~G~hg~~~v~~~s~~~v~~~~~~~p~~~~~~~~--~~---~~~~~~~~v~~~~~~i~~~ 238 (332)
+++++|+++|+++++|+++ ||||||++++|+||++++ +|+|+.+++.+. .+ ..+++.+++++++++|++.
T Consensus 187 ~r~~lA~~l~v~~~~V~~~-ViGeHGds~vp~wS~~~i----~G~pl~~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~ 261 (350)
T PLN02602 187 FRFLIADHLDVNAQDVQAY-IVGEHGDSSVALWSSVSV----GGVPVLSFLEKQQIAYEKETLEEIHRAVVDSAYEVIKL 261 (350)
T ss_pred HHHHHHHHhCCCccceeee-EEecCCCceEeeeeeeeE----CCEEHHHHhhccCCccCHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999997 689999999999999999 999999986541 11 1468999999999999999
Q ss_pred cCCcchHHHHHHHHHHHHHHHcCCCCCcEEEEEEeecCCCCCC-CCeEEEEeEEEe-CCeEEEecCCCCCHHHHHHHHHH
Q 019990 239 RKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDGSYGIP-EGLIYSFPVTCE-KGEWSIVKGLKVDEFSRAKMDAT 316 (332)
Q Consensus 239 ~g~~~~~~~a~a~~~~i~~~~~~~~~~~i~~~~v~~~g~yg~~-~~~~~s~Pv~~~-~G~~~~~~~~~l~~~E~~~l~~s 316 (332)
||.|+ +++|+++++++.+++. |+++++|+|++++|+||++ +++|||+||++| +|++++++ ++||++|+++|++|
T Consensus 262 KG~t~-~gia~a~a~ii~ail~--d~~~v~~vsv~~~g~Yg~~~~~v~~s~P~~ig~~Gi~~i~~-l~L~~~E~~~l~~s 337 (350)
T PLN02602 262 KGYTS-WAIGYSVASLVRSLLR--DQRRIHPVSVLAKGFHGIDEGDVFLSLPAQLGRNGVLGVVN-VHLTDEEAERLRKS 337 (350)
T ss_pred CCccH-HHHHHHHHHHHHHHHh--cCCCeEEEEEecccccCCCCCCcEEEEEEEEeCCeeEEEec-CCCCHHHHHHHHHH
Confidence 99766 5668999988877665 4689999999999999993 799999999999 99999995 99999999999999
Q ss_pred HHHHHHHHHHH
Q 019990 317 AEELAEEKTLA 327 (332)
Q Consensus 317 ~~~i~~~~~~~ 327 (332)
++.|++.++..
T Consensus 338 a~~l~~~~~~~ 348 (350)
T PLN02602 338 AKTLWEVQSQL 348 (350)
T ss_pred HHHHHHHHHHh
Confidence 99999887754
No 16
>KOG1495 consensus Lactate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=5.4e-60 Score=404.98 Aligned_cols=299 Identities=26% Similarity=0.377 Sum_probs=269.5
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCC-ccceEEeCCHHHHhCCCc
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPL-LKGVVATTDVVEACKDVN 83 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~-~~~v~~~~~~~~a~~~aD 83 (332)
..||.|+| +|.+|.+++..++.+++.+ |++|+|.++ ++++|..|||+|..... ..++....| +.+.++++
T Consensus 20 ~~KItVVG-~G~VGmAca~siL~k~Lad-----el~lvDv~~--dklkGE~MDLqH~s~f~~~~~V~~~~D-y~~sa~S~ 90 (332)
T KOG1495|consen 20 HNKITVVG-VGQVGMACAISILLKGLAD-----ELVLVDVNE--DKLKGEMMDLQHGSAFLSTPNVVASKD-YSVSANSK 90 (332)
T ss_pred CceEEEEc-cchHHHHHHHHHHHhhhhh-----ceEEEecCc--chhhhhhhhhccccccccCCceEecCc-ccccCCCc
Confidence 46999999 6999999999999999875 999999975 58999999999975333 356666656 56789999
Q ss_pred EEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCc-EEEeecccHH
Q 019990 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHN 162 (332)
Q Consensus 84 iVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~-i~~~t~l~~~ 162 (332)
+||+|||..+++|++|.+++++|+.+++.+...+.+|. |+++++++|||+|+|||+.|+. +++|.+| |+.||.||+.
T Consensus 91 lvIiTAGarq~~gesRL~lvQrNV~ifK~iip~lv~yS-pd~~llvvSNPVDilTYv~wKL-SgfP~nRViGsGcnLDsa 168 (332)
T KOG1495|consen 91 LVIITAGARQSEGESRLDLVQRNVDIFKAIIPALVKYS-PDCILLVVSNPVDILTYVTWKL-SGFPKNRVIGSGCNLDSA 168 (332)
T ss_pred EEEEecCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEecCchHHHHHHHHHH-cCCcccceeccCcCccHH
Confidence 99999999999999999999999999999999999996 9999999999999999999998 8999998 7899999999
Q ss_pred HHHHHHHHHcCCCCCCeeeeEEEecCCCceeecccCcccccCCCCcchhhhccc-------cccchhHHHHHHHhhHHHH
Q 019990 163 RAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVAD-------DNWLNTEFITTVQQRGAAI 235 (332)
Q Consensus 163 r~~~~~a~~~~v~~~~v~~~~V~G~hg~~~v~~~s~~~v~~~~~~~p~~~~~~~-------~~~~~~~~~~~v~~~~~~i 235 (332)
||++++++++|++|+++++|+ +||||++.||.||.+.+ +|.|+.++..+ +.| +++.+++.+.+|||
T Consensus 169 RFryLi~~~Lg~~pss~hgwI-iGEHGdSsV~vWSgvni----AGv~l~~l~~~~~t~~d~e~w--~eihK~v~~sayev 241 (332)
T KOG1495|consen 169 RFRYLIGNRLGVHPSSCHGWI-IGEHGDSSVPVWSGVNI----AGVSLKDLNPDLGTDYDPENW--KEIHKQVVDSAYEV 241 (332)
T ss_pred HHHHHHHHHhCCCcccceEEE-eeccCCccceecccccc----cceEHhHhChhhcCCCCHHHH--HHHHHHHHHHHHHH
Confidence 999999999999999999996 79999999999999999 99999998754 246 58999999999999
Q ss_pred HHhcCCcchHHHHHHHHHHHHHHHcCCCCCcEEEEEEeecCCCCCCCCeEEEEeEEEe-CCeEEEecCCCCCHHHHHHHH
Q 019990 236 IKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDGSYGIPEGLIYSFPVTCE-KGEWSIVKGLKVDEFSRAKMD 314 (332)
Q Consensus 236 ~~~~g~~~~~~~a~a~~~~i~~~~~~~~~~~i~~~~v~~~g~yg~~~~~~~s~Pv~~~-~G~~~~~~~~~l~~~E~~~l~ 314 (332)
++.||+|+|.. +.+.++++.+.+. +.++++|+|+..+|.|||.+++|||+||+++ +|+..+++ .+|+++|+++|+
T Consensus 242 iklKGyTswaI-glsva~l~~ail~--n~~~i~~Vst~~kg~~gI~~dVflSlPc~l~~~Gi~~vv~-~~Lt~~E~akL~ 317 (332)
T KOG1495|consen 242 IKLKGYTSWAI-GLSVADLAQAILR--NLRRIHPVSTMVKGLYGIDDDVFLSLPCLLGANGITHVVK-QKLTDEEVAKLK 317 (332)
T ss_pred HHhcCchHHHH-HHHHHHHHHHHHh--CcCceeeeeeccccccCCCCceEEecceeecCCchhhhhc-ccCCHHHHHHHH
Confidence 99999998754 7888887766555 4589999999999999998899999999999 99999995 999999999999
Q ss_pred HHHHHHHHHHH
Q 019990 315 ATAEELAEEKT 325 (332)
Q Consensus 315 ~s~~~i~~~~~ 325 (332)
+|++.|.+..+
T Consensus 318 kSa~tl~~~q~ 328 (332)
T KOG1495|consen 318 KSAKTLLEAQK 328 (332)
T ss_pred HHHHHHHHHHH
Confidence 99999976543
No 17
>KOG1496 consensus Malate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=2.1e-60 Score=401.08 Aligned_cols=330 Identities=74% Similarity=1.161 Sum_probs=318.1
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCC
Q 019990 3 KNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDV 82 (332)
Q Consensus 3 ~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (332)
+.+.+|+||||+|.||+++++.+.++.++|++++..++|+|+......++|..++|+|+.+|+...+..+++..++|+|.
T Consensus 2 ~epirVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~~~~~~LegV~mELqD~a~PlL~~Vvattd~~~afkdv 81 (332)
T KOG1496|consen 2 KEPIRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIPPMMSVLEGVKMELQDCALPLLKGVVATTDEVEAFKDV 81 (332)
T ss_pred CCceEEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCchHHHHHHHHHHHHHhhhhhHHHhhhcccChhhhhccC
Confidence 57889999999999999999999999999999999999999987777889999999999999988888888889999999
Q ss_pred cEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCcEEEeecccHH
Q 019990 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHN 162 (332)
Q Consensus 83 DiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~i~~~t~l~~~ 162 (332)
|+.|..++.||.+|++|.|++..|+.+++.-..++.+|++|++++++++||++..+.++.++++++|.++|.++|.||..
T Consensus 82 ~~ailvGa~PR~eGMERkDll~~NvkIfk~Qg~AL~k~A~~~~KVlVVgNPaNTNali~~k~ApsIP~kNfs~lTRLDhN 161 (332)
T KOG1496|consen 82 DVAILVGAMPRREGMERKDLLSANVKIFKSQGAALEKYAKPNVKVLVVGNPANTNALILKKFAPSIPEKNFSALTRLDHN 161 (332)
T ss_pred cEEEEeccccCcccchhhhHHhhcceeehhhhHHHHHhcCCCceEEEecCccccchhHHhhhCCCCchhcchhhhhhchh
Confidence 99999999999999999999999999999999999999989999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCeeeeEEEecCCCceeecccCcccccCCCCcchhhhccccccchhHHHHHHHhhHHHHHHhcCCc
Q 019990 163 RAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIKARKLS 242 (332)
Q Consensus 163 r~~~~~a~~~~v~~~~v~~~~V~G~hg~~~v~~~s~~~v~~~~~~~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~~~g~~ 242 (332)
|...++|.++|++.++|.++++||+|+.+|+|++.+++++.+.+.+|+.+.+.|+.|+..+|.+.||++|..+++.++.+
T Consensus 162 RA~~QlA~klgv~~~~VkNviIWGNHSsTQyPD~~hA~V~~~~~~~~v~e~v~d~~wL~g~Fi~tVQkRGaavi~ark~S 241 (332)
T KOG1496|consen 162 RALAQLALKLGVPVSDVKNVIIWGNHSSTQYPDVNHATVNTNGGEKPVKEAVKDDAWLQGEFIETVQKRGAAVIKARKLS 241 (332)
T ss_pred hHHHHHHHhhCCchhhcceeEEecccccccCCCccceeeeccCCcccHHHHhccchhhccchhhHHHhcchHhhhhhhhh
Confidence 99999999999999999999999999999999999999988777899999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHcCCCCCcEEEEEEeecCCCCCCCCeEEEEeEEEeCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 019990 243 SALSAASSACDHIRDWVLGTPKGTWVSMGVYSDGSYGIPEGLIYSFPVTCEKGEWSIVKGLKVDEFSRAKMDATAEELAE 322 (332)
Q Consensus 243 ~~~~~a~a~~~~i~~~~~~~~~~~i~~~~v~~~g~yg~~~~~~~s~Pv~~~~G~~~~~~~~~l~~~E~~~l~~s~~~i~~ 322 (332)
|.+|.|-+++++|++|+.+.++|.+++++|+++|.||+|.|..||+||++.+|.|+++++++++++-++++..++.+|++
T Consensus 242 SA~SaA~aacDhi~dw~~gTpeG~fvSmgV~sDGsYgip~gli~SfPv~~k~g~wkiVqgl~iddf~r~km~~t~~EL~e 321 (332)
T KOG1496|consen 242 SAMSAAKAACDHIRDWWFGTPEGTFVSMGVYSDGSYGIPDGLIFSFPVTIKNGDWKIVQGLPIDDFSREKMDLTAKELKE 321 (332)
T ss_pred hhhhHHHhHhhhhhheecCCCCccEEEEeeecCCCCCCCCCeEEEcceEecCCceEEEcCcchhHHHHHhhhhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhC
Q 019990 323 EKTLAYSCLN 332 (332)
Q Consensus 323 ~~~~~~~~~~ 332 (332)
+.+.++.+|+
T Consensus 322 Ekd~a~~~l~ 331 (332)
T KOG1496|consen 322 EKDLAYSCLS 331 (332)
T ss_pred hHHHHHHhhc
Confidence 9999999885
No 18
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=4.3e-59 Score=427.05 Aligned_cols=302 Identities=25% Similarity=0.316 Sum_probs=266.6
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCC-ccceEEeCCHHHHhCCC
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPL-LKGVVATTDVVEACKDV 82 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~-~~~v~~~~~~~~a~~~a 82 (332)
..+||+|+| +|+||+++++.|+..+++. +++|+|++. +++.|.++||.|+.... ...+....+ +++++||
T Consensus 2 ~~~Ki~IiG-aG~VG~~~a~~l~~~~~~~-----el~LiD~~~--~~~~g~a~Dl~~~~~~~~~~~v~~~~d-y~~~~~a 72 (312)
T cd05293 2 PRNKVTVVG-VGQVGMACAISILAKGLAD-----ELVLVDVVE--DKLKGEAMDLQHGSAFLKNPKIEADKD-YSVTANS 72 (312)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhcCCCC-----EEEEEeCCc--cHHHHHHHHHHHhhccCCCCEEEECCC-HHHhCCC
Confidence 346999999 5999999999999888764 999999965 57899999999986222 234554455 5679999
Q ss_pred cEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCcE-EEeecccH
Q 019990 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDH 161 (332)
Q Consensus 83 DiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~i-~~~t~l~~ 161 (332)
|+||++||.+++++++|.+++..|+++++++++.+++++ |+++++++|||+|.++++++++ +++|++++ +.+|.+|+
T Consensus 73 divvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~-p~~~vivvsNP~d~~t~~~~k~-sg~p~~~viG~gt~Ld~ 150 (312)
T cd05293 73 KVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYS-PNAILLVVSNPVDIMTYVAWKL-SGLPKHRVIGSGCNLDS 150 (312)
T ss_pred CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEccChHHHHHHHHHHH-hCCCHHHEEecCchHHH
Confidence 999999999999999999999999999999999999997 8999999999999999999998 79999995 55599999
Q ss_pred HHHHHHHHHHcCCCCCCeeeeEEEecCCCceeecccCcccccCCCCcchhhhccc-----cccchhHHHHHHHhhHHHHH
Q 019990 162 NRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVAD-----DNWLNTEFITTVQQRGAAII 236 (332)
Q Consensus 162 ~r~~~~~a~~~~v~~~~v~~~~V~G~hg~~~v~~~s~~~v~~~~~~~p~~~~~~~-----~~~~~~~~~~~v~~~~~~i~ 236 (332)
.|+++++|+++++++.+|+.+ |||+||++++|+||++++ +|+|+.+++.. +.-..+++.+++++++++|+
T Consensus 151 ~R~~~~la~~l~v~~~~v~~~-v~GeHG~s~vp~~S~~~i----~g~~l~~~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii 225 (312)
T cd05293 151 ARFRYLIAERLGVAPSSVHGW-IIGEHGDSSVPVWSGVNV----AGVRLQDLNPDIGTDKDPEKWKEVHKQVVDSAYEVI 225 (312)
T ss_pred HHHHHHHHHHhCCChhhEEEE-EeecCCCCccccceeceE----CCEEHHHHhhhccccccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987 589999999999999999 99999998632 11124789999999999999
Q ss_pred HhcCCcchHHHHHHHHHHHHHHHcCCCCCcEEEEEEeecCCCCCCCCeEEEEeEEEe-CCeEEEecCCCCCHHHHHHHHH
Q 019990 237 KARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDGSYGIPEGLIYSFPVTCE-KGEWSIVKGLKVDEFSRAKMDA 315 (332)
Q Consensus 237 ~~~g~~~~~~~a~a~~~~i~~~~~~~~~~~i~~~~v~~~g~yg~~~~~~~s~Pv~~~-~G~~~~~~~~~l~~~E~~~l~~ 315 (332)
+.||.|+| ++|+++++++.+++. ++++++|++++.+|+||++.++|||+||++| +|++++++ ++||++|+++|++
T Consensus 226 ~~kg~t~~-~~a~a~~~ii~ail~--d~~~~~~vsv~~~g~yg~~~d~~~svP~~ig~~Gi~~i~~-l~L~~~E~~~l~~ 301 (312)
T cd05293 226 KLKGYTSW-AIGLSVADLVDAILR--NTGRVHSVSTLVKGLHGIEDEVFLSLPCILGENGITHVIK-QPLTEEEQEKLQK 301 (312)
T ss_pred HhcCCchH-HHHHHHHHHHHHHHc--CCCeEEEEEEEeCCccCCCCCeEEEEeEEEeCCceEEEec-CCCCHHHHHHHHH
Confidence 99997765 568999998887775 3579999999999999998899999999999 99999995 9999999999999
Q ss_pred HHHHHHHHHH
Q 019990 316 TAEELAEEKT 325 (332)
Q Consensus 316 s~~~i~~~~~ 325 (332)
|++.|++.++
T Consensus 302 s~~~i~~~~~ 311 (312)
T cd05293 302 SADTLWEVQK 311 (312)
T ss_pred HHHHHHHHhh
Confidence 9999998765
No 19
>TIGR01756 LDH_protist lactate dehydrogenase. This model represents a family of protist lactate dehydrogenases which have aparrently evolved from a recent protist malate dehydrogenase ancestor. Lactate dehydrogenase converts the hydroxyl at C-2 of lactate to a carbonyl in the product, pyruvate. The preference of this enzyme for NAD or NADP has not been determined. A critical residue in malate dehydrogenase, arginine-91 (T. vaginalis numbering) has been mutated to a leucine, eliminating the positive charge which complemeted the carboxylate in malate which is absent in lactate. Several other more subtle changes are proposed to make the active site smaller to accomadate the less bulky lactate molecule.
Probab=100.00 E-value=2.5e-59 Score=427.16 Aligned_cols=304 Identities=37% Similarity=0.653 Sum_probs=266.7
Q ss_pred HHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcEEEEecCCCCCCCCChhHH
Q 019990 23 PMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDV 102 (332)
Q Consensus 23 ~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDiVi~~ag~~~~~~~~~~~~ 102 (332)
..|.++.++| +.+..++|+|++++.++++|.++|+.|+.++.........+.+++++|||+||++||.|+++|++|.++
T Consensus 3 ~~~~~g~~~g-~~~~~l~L~D~~~~~~~a~g~a~Dl~d~~~~~~~~~i~~~~~~~~~~daDiVVitaG~~~k~g~tR~dl 81 (313)
T TIGR01756 3 HWIANGDLYG-NRPVCLHLLEIPPALNRLEALAMELEDCAFPNLAGTIVTTKLEEAFKDIDCAFLVASVPLKPGEVRADL 81 (313)
T ss_pred ceeccCcccC-CCeEEEEEecCCCccchhHhHHHHHHHhccccCCceEecCCHHHHhCCCCEEEECCCCCCCcCCCHHHH
Confidence 3455667788 777899999998766789999999999874433223335676689999999999999999999999999
Q ss_pred HhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHH-HHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 103 MSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALIL-KEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 103 ~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~-~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
+..|+++++++++.+.+++++++++|++|||+|+|++++ ++. +++|++.|+++|.||+.|+++++|++++++|++|+.
T Consensus 82 l~~N~~I~~~i~~~i~~~a~~~~ivivvtNPvDv~t~v~~~~~-sg~p~~vig~gt~LDsaR~r~~la~~l~v~~~~V~~ 160 (313)
T TIGR01756 82 LTKNTPIFKATGEALSEYAKPTVKVLVIGNPVNTNCLVAMLHA-PKLSAENFSSLCMLDHNRAVSRIASKLKVPVDHIYH 160 (313)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCeEEEEeCCchHHHHHHHHHHc-CCCCHHHEEecccHHHHHHHHHHHHHhCcChhheee
Confidence 999999999999999999855688999999999999999 465 899988889999999999999999999999999987
Q ss_pred eEEEecCCCceeecccCcccccCCCCcchhhh--ccccccchhHHHHHHHhhHHHHHHhcCCcchHHHHHHHHHHHHHHH
Q 019990 182 VIIWGNHSSTQYPDVNHATVTTSKGEKPVREA--VADDNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWV 259 (332)
Q Consensus 182 ~~V~G~hg~~~v~~~s~~~v~~~~~~~p~~~~--~~~~~~~~~~~~~~v~~~~~~i~~~~g~~~~~~~a~a~~~~i~~~~ 259 (332)
++||||||++++|+||+++++. +|+|+..+ +. ++|.++++.+++++++++|++.||+|++.++|.++++++++|+
T Consensus 161 ~~V~GeHG~s~vp~~S~~~V~~--~G~~~~~~~~~~-~~~~~~~i~~~v~~~g~~Ii~~kg~t~~~~~a~ai~~iv~ail 237 (313)
T TIGR01756 161 VVVWGNHAESMVADLTHAEFTK--NGKHQKVFDELC-RDYPEPDFFEVIAQRAWKILEMRGFTSAASPVKASLQHMKAWL 237 (313)
T ss_pred eEEEECCCCceeecccccEEec--CCeehhHhhhcC-cHhHHHHHHHHHHHHHHHHHhCcCCcchHHHHHHHHHHHHHHh
Confidence 7789999999999999999842 67786544 42 2466789999999999999999998888877789999999998
Q ss_pred cCCCCCcEEEEEEeec--CCCCCCCCeEEEEeEEEe-CCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHhhhh
Q 019990 260 LGTPKGTWVSMGVYSD--GSYGIPEGLIYSFPVTCE-KGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLAYSCL 331 (332)
Q Consensus 260 ~~~~~~~i~~~~v~~~--g~yg~~~~~~~s~Pv~~~-~G~~~~~~~~~l~~~E~~~l~~s~~~i~~~~~~~~~~~ 331 (332)
.+.++++|+|+|++++ |+||+++|+|||+||++| +|+++++++++|+++|+++|++|++.|+++.+.++..|
T Consensus 238 ~~~~~~~i~pvsv~l~~~g~YGi~~~v~~s~P~vig~~Gv~~ive~l~L~~~E~~~l~~Sa~~l~~e~~~~~~~~ 312 (313)
T TIGR01756 238 FGTRPGEVLSMGIPVPEGNPYGIKPGVIFSFPCTVDEDGKVHVVENFELNPWLKTKLAQTEKDLFEERETALKAL 312 (313)
T ss_pred cCCCCCeEEEEEEEecCCCccCCCCCEEEEEEEEEeCCceEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 8766789999999985 399998899999999999 99999996699999999999999999999999987765
No 20
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=100.00 E-value=3.2e-58 Score=422.78 Aligned_cols=300 Identities=23% Similarity=0.384 Sum_probs=265.7
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcEE
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIA 85 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDiV 85 (332)
+||+|+| +|.+|++++..|+..+... +|.++|++. +++++..+|+.|...+.........+.++++++||+|
T Consensus 1 ~kI~IIG-aG~vG~~~a~~l~~~g~~~-----ei~l~D~~~--~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDIV 72 (306)
T cd05291 1 RKVVIIG-AGHVGSSFAYSLVNQGIAD-----ELVLIDINE--EKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIV 72 (306)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhcCCCC-----EEEEEeCCc--chhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCEE
Confidence 4899999 6999999999999888643 899999965 5688899999887543333333333445679999999
Q ss_pred EEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCc-EEEeecccHHHH
Q 019990 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRA 164 (332)
Q Consensus 86 i~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~-i~~~t~l~~~r~ 164 (332)
|+++|.|++++++|.+++..|+++++++++.+++++ |+++++++|||+|.++++++++ +++|+++ |+.+|.||+.|+
T Consensus 73 Iitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~-~~~~vivvsNP~d~~~~~~~~~-~g~p~~~v~g~gt~LDs~R~ 150 (306)
T cd05291 73 VITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASG-FDGIFLVASNPVDVITYVVQKL-SGLPKNRVIGTGTSLDTARL 150 (306)
T ss_pred EEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEecChHHHHHHHHHHH-hCcCHHHEeeccchHHHHHH
Confidence 999999999999999999999999999999999998 8999999999999999999998 8999999 566699999999
Q ss_pred HHHHHHHcCCCCCCeeeeEEEecCCCceeecccCcccccCCCCcchhhhccccccc---hhHHHHHHHhhHHHHHHhcCC
Q 019990 165 MGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVADDNWL---NTEFITTVQQRGAAIIKARKL 241 (332)
Q Consensus 165 ~~~~a~~~~v~~~~v~~~~V~G~hg~~~v~~~s~~~v~~~~~~~p~~~~~~~~~~~---~~~~~~~v~~~~~~i~~~~g~ 241 (332)
++++|+++++++.+|+++ |||+||++++|+||++++ +|+|+.+++.+..|. ++++.+++++++++|++.||+
T Consensus 151 ~~~la~~l~v~~~~v~~~-V~G~Hg~s~~~~~S~~~v----~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~ii~~kg~ 225 (306)
T cd05291 151 RRALAEKLNVDPRSVHAY-VLGEHGDSQFVAWSTVTV----GGKPLLDLLKEGKLSELDLDEIEEDVRKAGYEIINGKGA 225 (306)
T ss_pred HHHHHHHHCCCcccceEE-EEecCCCceeecceeeEE----cCEEHHHHhhccccChHHHHHHHHHHHHHHHHHHHccCc
Confidence 999999999999999996 799999999999999999 999999988765553 578999999999999999997
Q ss_pred cchHHHHHHHHHHHHHHHcCCCCCcEEEEEEeecCCCCCCCCeEEEEeEEEe-CCeEEEecCCCCCHHHHHHHHHHHHHH
Q 019990 242 SSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDGSYGIPEGLIYSFPVTCE-KGEWSIVKGLKVDEFSRAKMDATAEEL 320 (332)
Q Consensus 242 ~~~~~~a~a~~~~i~~~~~~~~~~~i~~~~v~~~g~yg~~~~~~~s~Pv~~~-~G~~~~~~~~~l~~~E~~~l~~s~~~i 320 (332)
|++ ++|.++++++.+++. ++++++|+|++++|+||. +++|||+||+++ +|++++++ ++|+++|+++|++|+++|
T Consensus 226 t~~-~~a~a~~~~~~ail~--~~~~v~~~s~~~~g~yg~-~~v~~s~P~~ig~~Gv~~i~~-~~l~~~E~~~l~~s~~~l 300 (306)
T cd05291 226 TYY-GIATALARIVKAILN--DENAILPVSAYLDGEYGE-KDVYIGVPAIIGRNGVEEVIE-LDLTEEEQEKFEKSADII 300 (306)
T ss_pred cHH-HHHHHHHHHHHHHHc--CCCEEEEEEEEeccccCC-CCEEEEEEEEEeCCCEEEEEC-CCCCHHHHHHHHHHHHHH
Confidence 764 557899888888776 468999999999999995 899999999999 99999995 999999999999999999
Q ss_pred HHHHH
Q 019990 321 AEEKT 325 (332)
Q Consensus 321 ~~~~~ 325 (332)
++.++
T Consensus 301 ~~~~~ 305 (306)
T cd05291 301 KENIK 305 (306)
T ss_pred HHHhh
Confidence 98875
No 21
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=100.00 E-value=6.9e-58 Score=418.72 Aligned_cols=296 Identities=25% Similarity=0.397 Sum_probs=266.7
Q ss_pred EEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCc-cceEEeCCHHHHhCCCcEEE
Q 019990 8 VLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLL-KGVVATTDVVEACKDVNIAV 86 (332)
Q Consensus 8 I~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~-~~v~~~~~~~~a~~~aDiVi 86 (332)
|+|+| +|.||+++++.|+..+++. +++|+|++. +++.+..+||.|...+.. ..+....+ ++++++||+||
T Consensus 1 i~iiG-aG~VG~~~a~~l~~~~~~~-----el~l~D~~~--~~~~g~~~DL~~~~~~~~~~~i~~~~~-~~~l~~aDiVI 71 (300)
T cd00300 1 ITIIG-AGNVGAAVAFALIAKGLAS-----ELVLVDVNE--EKAKGDALDLSHASAFLATGTIVRGGD-YADAADADIVV 71 (300)
T ss_pred CEEEC-CCHHHHHHHHHHHhcCCCC-----EEEEEeCCc--cHHHHHHHhHHHhccccCCCeEEECCC-HHHhCCCCEEE
Confidence 57999 6999999999999888764 899999964 578999999999865432 23333344 67899999999
Q ss_pred EecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCcEEEe-ecccHHHHH
Q 019990 87 MVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCL-TRLDHNRAM 165 (332)
Q Consensus 87 ~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~i~~~-t~l~~~r~~ 165 (332)
+++|.|++++++|.+++..|+++++++++.+++++ |+++++++|||+|.++++++++ +++|++|++|. |.+|+.|++
T Consensus 72 itag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~~-p~~~viv~sNP~d~~~~~~~~~-sg~~~~kviG~gt~lDs~r~~ 149 (300)
T cd00300 72 ITAGAPRKPGETRLDLINRNAPILRSVITNLKKYG-PDAIILVVSNPVDILTYVAQKL-SGLPKNRVIGSGTLLDSARFR 149 (300)
T ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccChHHHHHHHHHHH-hCcCHHHEEecCCcHHHHHHH
Confidence 99999999999999999999999999999999998 9999999999999999999998 78999996555 899999999
Q ss_pred HHHHHHcCCCCCCeeeeEEEecCCCceeecccCcccccCCCCcchhhhccccccchhHHHHHHHhhHHHHHHhcCCcchH
Q 019990 166 GQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIKARKLSSAL 245 (332)
Q Consensus 166 ~~~a~~~~v~~~~v~~~~V~G~hg~~~v~~~s~~~v~~~~~~~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~~~g~~~~~ 245 (332)
+++|+++++++.+|+++ |+|+||++++|+||++++ +|+|+.+++.+++|..+++.+++++++++|++.||+|+ +
T Consensus 150 ~~la~~l~v~~~~v~~~-viGeHg~s~v~~~S~~~v----~g~p~~~~~~~~~~~~~~l~~~v~~~~~~ii~~kg~t~-~ 223 (300)
T cd00300 150 SLLAEKLDVDPQSVHAY-VLGEHGDSQVVAWSTATV----GGLPLEELAPFTKLDLEAIEEEVRTSGYEIIRLKGATN-Y 223 (300)
T ss_pred HHHHHHhCCCcccEEEE-EEeccCCceeeeeeeeEE----CCEEHHHhhcccHHHHHHHHHHHHHHHHHHHHccCcch-H
Confidence 99999999999999997 589999999999999999 99999999877677889999999999999999999776 4
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEEeecCCCCCCCCeEEEEeEEEe-CCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 019990 246 SAASSACDHIRDWVLGTPKGTWVSMGVYSDGSYGIPEGLIYSFPVTCE-KGEWSIVKGLKVDEFSRAKMDATAEELAEEK 324 (332)
Q Consensus 246 ~~a~a~~~~i~~~~~~~~~~~i~~~~v~~~g~yg~~~~~~~s~Pv~~~-~G~~~~~~~~~l~~~E~~~l~~s~~~i~~~~ 324 (332)
++|+++++++.+++.+ +++++|+|++++|+||. +++|||+||++| +|++++++ ++|+++|+++|++|++.|++.+
T Consensus 224 ~~a~a~~~~~~ai~~~--~~~v~~~s~~~~g~yg~-~~~~~s~Pv~ig~~Gi~~i~~-l~L~~~E~~~l~~s~~~l~~~~ 299 (300)
T cd00300 224 GIATAIADIVKSILLD--ERRVLPVSAVQEGQYGI-EDVALSVPAVVGREGVVRILE-IPLTEDEEAKLQKSAEALKEVL 299 (300)
T ss_pred HHHHHHHHHHHHHHcC--CCeEEEEEEEecCccCC-CCEEEEEEEEEeCCCeEEEec-CCCCHHHHHHHHHHHHHHHHHh
Confidence 6789999988887763 58999999999999995 899999999999 99999995 9999999999999999999875
No 22
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=6.1e-57 Score=410.48 Aligned_cols=297 Identities=24% Similarity=0.342 Sum_probs=255.2
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEe---CCHHHHhCCC
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVAT---TDVVEACKDV 82 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~---~~~~~a~~~a 82 (332)
|||+|+||+|+||+++++.|+.++++. +++|+|++ ++.|.++||.|+.. ...+... ++++++++||
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~-----elvLiDi~----~a~g~alDL~~~~~--~~~i~~~~~~~~~y~~~~da 69 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVS-----ELALYDIV----NTPGVAADLSHINT--PAKVTGYLGPEELKKALKGA 69 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCc-----EEEEEecC----ccceeehHhHhCCC--cceEEEecCCCchHHhcCCC
Confidence 589999977999999999999888764 99999995 57899999999752 1234432 3458999999
Q ss_pred cEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhH----HHHHHHHCCCCCCCcEEEeec
Q 019990 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTN----ALILKEFAPSIPAKNITCLTR 158 (332)
Q Consensus 83 DiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~----~~~~~~~~~~~~~~~i~~~t~ 158 (332)
|+||++||.|+++|++|.+++..|+++++++++.+++++ |+++++++|||+|++ ++.+++. +++|++|++|.|.
T Consensus 70 DivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~-p~a~vivvtNPvDv~~~i~t~~~~~~-s~~p~~rviG~~~ 147 (310)
T cd01337 70 DVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKAC-PKALILIISNPVNSTVPIAAEVLKKA-GVYDPKRLFGVTT 147 (310)
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccCchhhHHHHHHHHHHHh-cCCCHHHEEeeec
Confidence 999999999999999999999999999999999999997 899999999999997 7777886 8899999888888
Q ss_pred ccHHHHHHHHHHHcCCCCCCeeeeEEEecC-CCceeecccCcccccCCCCcchhhhccccccchhHHHHHHHhhHHHHHH
Q 019990 159 LDHNRAMGQISERLKVHVSDVKNVIIWGNH-SSTQYPDVNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIK 237 (332)
Q Consensus 159 l~~~r~~~~~a~~~~v~~~~v~~~~V~G~h-g~~~v~~~s~~~v~~~~~~~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~ 237 (332)
||+.|+++++|+++|+++++|+++ ||||| |+++||+||++.+ . .++ .++ .++++.+++++++++|++
T Consensus 148 LDs~R~~~~la~~l~v~~~~V~~~-v~GeHsGds~vp~~S~~~~----~----~~~-~~~--~~~~i~~~v~~~g~~Ii~ 215 (310)
T cd01337 148 LDVVRANTFVAELLGLDPAKVNVP-VIGGHSGVTILPLLSQCQP----P----FTF-DQE--EIEALTHRIQFGGDEVVK 215 (310)
T ss_pred hHHHHHHHHHHHHhCcCHHHEEEE-EEecCCCCceecccccccc----c----ccC-CHH--HHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999976 69999 8999999999976 2 222 222 257899999999999999
Q ss_pred hc-C-CcchHHHHHHHHHHHHHHHcC-CCCCcEEEEEEeecCCCCCCCCeEEEEeEEEe-CCeEEEecCC-CCCHHHHHH
Q 019990 238 AR-K-LSSALSAASSACDHIRDWVLG-TPKGTWVSMGVYSDGSYGIPEGLIYSFPVTCE-KGEWSIVKGL-KVDEFSRAK 312 (332)
Q Consensus 238 ~~-g-~~~~~~~a~a~~~~i~~~~~~-~~~~~i~~~~v~~~g~yg~~~~~~~s~Pv~~~-~G~~~~~~~~-~l~~~E~~~ 312 (332)
.| | +++++++|.++++++.+++.+ .+++.+++++ +.+|+ |. +++|||+||++| +|+.++++ + +|+++|+++
T Consensus 216 ~k~gkg~t~~~~a~a~~~iv~aIl~~~~~~~~~~~~s-~~~~~-g~-~~v~~s~P~~ig~~Gv~~i~~-l~~L~~~E~~~ 291 (310)
T cd01337 216 AKAGAGSATLSMAYAGARFANSLLRGLKGEKGVIECA-YVESD-VT-EAPFFATPVELGKNGVEKNLG-LGKLNDYEKKL 291 (310)
T ss_pred CccCCCCcchhHHHHHHHHHHHHHHhcCCCcceEEEE-EEecc-CC-CceEEEEEEEEeCCeEEEEeC-CCCCCHHHHHH
Confidence 85 2 355578899999998888743 2345678777 66666 65 799999999999 99999985 9 699999999
Q ss_pred HHHHHHHHHHHHHHHhhhh
Q 019990 313 MDATAEELAEEKTLAYSCL 331 (332)
Q Consensus 313 l~~s~~~i~~~~~~~~~~~ 331 (332)
|++|++.|++.++++++|.
T Consensus 292 l~~S~~~i~~~~~~g~~~~ 310 (310)
T cd01337 292 LEAALPELKKNIEKGVDFV 310 (310)
T ss_pred HHHHHHHHHHHHhhhcccC
Confidence 9999999999999999884
No 23
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=100.00 E-value=8.9e-57 Score=410.21 Aligned_cols=297 Identities=25% Similarity=0.330 Sum_probs=255.1
Q ss_pred EEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEe---CCHHHHhCCCc
Q 019990 7 RVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVAT---TDVVEACKDVN 83 (332)
Q Consensus 7 kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~---~~~~~a~~~aD 83 (332)
||+|+||+|.||+++++.|+.+++.. +++|+|+++ ..|.++||.|... ...+... ++++++++|||
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~-----elvL~Di~~----a~g~a~DL~~~~~--~~~i~~~~~~~~~~~~~~daD 69 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVS-----ELSLYDIAG----AAGVAADLSHIPT--AASVKGFSGEEGLENALKGAD 69 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCc-----EEEEecCCC----CcEEEchhhcCCc--CceEEEecCCCchHHHcCCCC
Confidence 79999977999999999998888754 999999964 5689999999652 2344431 24578999999
Q ss_pred EEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhh----HHHHHHHHCCCCCCCcEEEeecc
Q 019990 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANT----NALILKEFAPSIPAKNITCLTRL 159 (332)
Q Consensus 84 iVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~----~~~~~~~~~~~~~~~~i~~~t~l 159 (332)
+||++||.+++++++|.+++..|+++++++++.+.+++ |+++++++|||+|+ +++++++. +++|++|++|.+.|
T Consensus 70 ivvitaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~~-p~~iiivvsNPvDv~~~i~t~~~~~~-sg~p~~rViG~g~L 147 (312)
T TIGR01772 70 VVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAESC-PKAMILVITNPVNSTVPIAAEVLKKK-GVYDPNKLFGVTTL 147 (312)
T ss_pred EEEEeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHhC-CCeEEEEecCchhhHHHHHHHHHHHh-cCCChHHEEeeecc
Confidence 99999999999999999999999999999999999997 99999999999998 88888887 89999998777789
Q ss_pred cHHHHHHHHHHHcCCCCCCeeeeEEEecCCC-ceeecccCcccccCCCCcchhhhccccccchhHHHHHHHhhHHHHHHh
Q 019990 160 DHNRAMGQISERLKVHVSDVKNVIIWGNHSS-TQYPDVNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIKA 238 (332)
Q Consensus 160 ~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg~-~~v~~~s~~~v~~~~~~~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~~ 238 (332)
|+.|+++++|+++++++++++++ ||||||+ +++|+||++++ . |+ +.++ .++++.+++++++++|++.
T Consensus 148 DsaR~r~~la~~l~v~~~~v~~~-ViGeHg~~s~vp~~S~~~~----~--~~---~~~~--~~~~i~~~v~~~g~~Ii~~ 215 (312)
T TIGR01772 148 DIVRANTFVAELKGKDPMEVNVP-VIGGHSGETIIPLISQCPG----K--VL---FTED--QLEALIHRIQNAGTEVVKA 215 (312)
T ss_pred hHHHHHHHHHHHhCCCHHHeEEE-EEEecCCCccccccccccc----c--CC---CCHH--HHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999986 6999986 99999999885 2 22 2222 2578999999999999998
Q ss_pred c-C-CcchHHHHHHHHHHHHHHHcC-CCCCcEEEEEEeecCCCCCCCCeEEEEeEEEe-CCeEEEecCC-CCCHHHHHHH
Q 019990 239 R-K-LSSALSAASSACDHIRDWVLG-TPKGTWVSMGVYSDGSYGIPEGLIYSFPVTCE-KGEWSIVKGL-KVDEFSRAKM 313 (332)
Q Consensus 239 ~-g-~~~~~~~a~a~~~~i~~~~~~-~~~~~i~~~~v~~~g~yg~~~~~~~s~Pv~~~-~G~~~~~~~~-~l~~~E~~~l 313 (332)
| | .++++++|+++++++.+++.. .++++++|++ +++|+||. +++|||+||++| +|+.++++ + +||++|+++|
T Consensus 216 k~gkg~t~~~ia~a~~~iv~ail~~~~d~~~v~~~s-~~~g~yg~-~~v~~s~P~~ig~~Gv~~i~~-~~~L~~~E~~~l 292 (312)
T TIGR01772 216 KAGAGSATLSMAFAGARFVLSLVRGLKGEEGVVECA-YVESDGVT-EATFFATPLLLGKNGVEKRLG-IGKLSSFEEKML 292 (312)
T ss_pred ccCCCChhHHHHHHHHHHHHHHHHhhCCCccEEEEE-EEccCCCc-CceEEEEEEEEcCCeeEEEEc-cCCCCHHHHHHH
Confidence 4 2 244578899998877765531 1357899965 88999997 799999999999 99999996 8 8999999999
Q ss_pred HHHHHHHHHHHHHHhhhh
Q 019990 314 DATAEELAEEKTLAYSCL 331 (332)
Q Consensus 314 ~~s~~~i~~~~~~~~~~~ 331 (332)
++|++.|++.++++++|.
T Consensus 293 ~~S~~~i~~~~~~g~~~~ 310 (312)
T TIGR01772 293 NGALPELKKNIKKGEEFV 310 (312)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999999985
No 24
>PTZ00325 malate dehydrogenase; Provisional
Probab=100.00 E-value=4e-56 Score=406.98 Aligned_cols=301 Identities=23% Similarity=0.296 Sum_probs=259.7
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEe---CCHHHHh
Q 019990 3 KNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVAT---TDVVEAC 79 (332)
Q Consensus 3 ~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~---~~~~~a~ 79 (332)
.+|+||+||||+|.||+++++.|...+++. +++|+|+. .+.+.++|+.|... ...+... .+.++++
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~-----elvL~Di~----~~~g~a~Dl~~~~~--~~~v~~~td~~~~~~~l 74 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVS-----ELSLYDIV----GAPGVAADLSHIDT--PAKVTGYADGELWEKAL 74 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCC-----EEEEEecC----CCcccccchhhcCc--CceEEEecCCCchHHHh
Confidence 357899999988999999999998777654 99999992 46788899998643 1233332 3347899
Q ss_pred CCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHH----HHCCCCCCCcEEE
Q 019990 80 KDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILK----EFAPSIPAKNITC 155 (332)
Q Consensus 80 ~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~----~~~~~~~~~~i~~ 155 (332)
+|+|+||+++|.+++++++|.+++..|+++++++++++++++ |+.+++++|||+|.++++++ +. +++||++++|
T Consensus 75 ~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~-~~~iviv~SNPvdv~~~~~~~~~~~~-sg~p~~~viG 152 (321)
T PTZ00325 75 RGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSA-PKAIVGIVSNPVNSTVPIAAETLKKA-GVYDPRKLFG 152 (321)
T ss_pred CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHhhhhhc-cCCChhheee
Confidence 999999999999999999999999999999999999999997 88899999999999999985 54 7899999877
Q ss_pred eecccHHHHHHHHHHHcCCCCCCeeeeEEEecCCC-ceeecccCcccccCCCCcchhhhccccccchhHHHHHHHhhHHH
Q 019990 156 LTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSS-TQYPDVNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAA 234 (332)
Q Consensus 156 ~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg~-~~v~~~s~~~v~~~~~~~p~~~~~~~~~~~~~~~~~~v~~~~~~ 234 (332)
.+.||+.|+++++|+++|++|++|+++ ||||||+ ++||+||++ |.|+. ++ ..+++.+++++++++
T Consensus 153 ~g~LDs~R~r~~la~~l~v~~~~V~~~-VlGeHGd~s~v~~~S~~-------g~~l~----~~--~~~~i~~~v~~~g~~ 218 (321)
T PTZ00325 153 VTTLDVVRARKFVAEALGMNPYDVNVP-VVGGHSGVTIVPLLSQT-------GLSLP----EE--QVEQITHRVQVGGDE 218 (321)
T ss_pred chhHHHHHHHHHHHHHhCcChhheEEE-EEeecCCcccccchhcc-------CCCCC----HH--HHHHHHHHHHHHHHH
Confidence 778999999999999999999999986 6899999 899999997 34553 22 247899999999999
Q ss_pred HHHhcC--CcchHHHHHHHHHHHHHHHcC-CCCCcEEEEEEeecCCCCCCCCeEEEEeEEEe-CCeEEEecCCCCCHHHH
Q 019990 235 IIKARK--LSSALSAASSACDHIRDWVLG-TPKGTWVSMGVYSDGSYGIPEGLIYSFPVTCE-KGEWSIVKGLKVDEFSR 310 (332)
Q Consensus 235 i~~~~g--~~~~~~~a~a~~~~i~~~~~~-~~~~~i~~~~v~~~g~yg~~~~~~~s~Pv~~~-~G~~~~~~~~~l~~~E~ 310 (332)
|++.|| +++++++|+++++++.+++.+ .++++++|++ +++|+||+ +++|||+||++| +|+.++++.++|+++|+
T Consensus 219 Ii~~k~~kg~t~~g~a~a~~~i~~ail~~~~~~~~v~~~~-~~~g~yg~-~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~ 296 (321)
T PTZ00325 219 VVKAKEGAGSATLSMAYAAAEWSTSVLKALRGDKGIVECA-FVESDMRP-ECPFFSSPVELGKEGVERVLPIGPLNAYEE 296 (321)
T ss_pred HHhcccCCCCchHHHHHHHHHHHHHHHhhcCCCCCeEEEE-EEecCCCC-CCeEEEEEEEEcCCeeEEEcCCCCCCHHHH
Confidence 999873 356678899999988887753 2457899985 89999997 799999999999 99999994389999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhC
Q 019990 311 AKMDATAEELAEEKTLAYSCLN 332 (332)
Q Consensus 311 ~~l~~s~~~i~~~~~~~~~~~~ 332 (332)
++|++|++.|++.++++++|++
T Consensus 297 ~~l~~S~~~i~~~~~~~~~~~~ 318 (321)
T PTZ00325 297 ELLEAAVPDLKKNIEKGLEFAR 318 (321)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999974
No 25
>PTZ00117 malate dehydrogenase; Provisional
Probab=100.00 E-value=1.5e-55 Score=406.03 Aligned_cols=304 Identities=25% Similarity=0.379 Sum_probs=265.4
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCc--cceEEeCCHHHHhCC
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLL--KGVVATTDVVEACKD 81 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~--~~v~~~~~~~~a~~~ 81 (332)
+.+||+|+| +|.+|+++++.|+..++ . +++|+|++. +++.+..+|+.|...... ..+..+++. ++++|
T Consensus 4 ~~~KI~IIG-aG~vG~~ia~~l~~~~~-~-----~l~L~Di~~--~~~~g~~lDl~~~~~~~~~~~~i~~~~d~-~~l~~ 73 (319)
T PTZ00117 4 KRKKISMIG-AGQIGSTVALLILQKNL-G-----DVVLYDVIK--GVPQGKALDLKHFSTLVGSNINILGTNNY-EDIKD 73 (319)
T ss_pred CCcEEEEEC-CCHHHHHHHHHHHHCCC-C-----eEEEEECCC--ccchhHHHHHhhhccccCCCeEEEeCCCH-HHhCC
Confidence 457999999 59999999999988775 2 899999975 456788899988743222 244444554 58999
Q ss_pred CcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCcEEEe-eccc
Q 019990 82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCL-TRLD 160 (332)
Q Consensus 82 aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~i~~~-t~l~ 160 (332)
||+||+++|.+++++++|.+++..|.++++++++.+++++ |+++++++|||++.+++.++++ +++|+++++|. |.+|
T Consensus 74 ADiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~-p~a~vivvsNP~di~t~~~~~~-s~~p~~rviG~gt~ld 151 (319)
T PTZ00117 74 SDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYC-PNAFVICVTNPLDCMVKVFQEK-SGIPSNKICGMAGVLD 151 (319)
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecChHHHHHHHHHHh-hCCCcccEEEecchHH
Confidence 9999999999999999999999999999999999999998 8999999999999999999997 78999996555 5899
Q ss_pred HHHHHHHHHHHcCCCCCCeeeeEEEecCCCceeecccCcccccCCCCcchhhhccccccc---hhHHHHHHHhhHHHHHH
Q 019990 161 HNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVADDNWL---NTEFITTVQQRGAAIIK 237 (332)
Q Consensus 161 ~~r~~~~~a~~~~v~~~~v~~~~V~G~hg~~~v~~~s~~~v~~~~~~~p~~~~~~~~~~~---~~~~~~~v~~~~~~i~~ 237 (332)
+.|+++++|+++|+++++|+.++ +|+||++++|+||++++ +|+|+.+++.++.|. ++++.+++++++++|++
T Consensus 152 s~R~~~~la~~l~v~~~~v~~~v-iGeHg~~~v~~~s~~~v----~g~p~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~ 226 (319)
T PTZ00117 152 SSRFRCNLAEKLGVSPGDVSAVV-IGGHGDLMVPLPRYCTV----NGIPLSDFVKKGAITEKEINEIIKKTRNMGGEIVK 226 (319)
T ss_pred HHHHHHHHHHHhCCCcccceEEE-eecCCCcEEeceeeceE----CCEEHHHHhhccccCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999875 79999999999999999 999999997654453 46799999999999999
Q ss_pred h--cCCcchHHHHHHHHHHHHHHHcCCCCCcEEEEEEeecCCCCCCCCeEEEEeEEEe-CCeEEEecCCCCCHHHHHHHH
Q 019990 238 A--RKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDGSYGIPEGLIYSFPVTCE-KGEWSIVKGLKVDEFSRAKMD 314 (332)
Q Consensus 238 ~--~g~~~~~~~a~a~~~~i~~~~~~~~~~~i~~~~v~~~g~yg~~~~~~~s~Pv~~~-~G~~~~~~~~~l~~~E~~~l~ 314 (332)
. || ++++++|+++++++.+++.+ +++++|+|++++|+||+ .++|||+||+++ +|++++++ ++|+++|+++|+
T Consensus 227 ~~~kg-~t~~~~a~a~~~~~~ail~~--~~~v~~~s~~~~g~yg~-~~~~~s~P~~ig~~Gv~~i~~-l~l~~~E~~~l~ 301 (319)
T PTZ00117 227 LLKKG-SAFFAPAAAIVAMIEAYLKD--EKRVLVCSVYLNGQYNC-KNLFVGVPVVIGGKGIEKVIE-LELNAEEKELFD 301 (319)
T ss_pred hcCCC-ChHHHHHHHHHHHHHHHhcC--CCeEEEEEEEeccccCC-CCeEEEEEEEEeCCeEEEEeC-CCCCHHHHHHHH
Confidence 7 55 44578899999988887764 58999999999999999 499999999999 99999996 999999999999
Q ss_pred HHHHHHHHHHHHHhh
Q 019990 315 ATAEELAEEKTLAYS 329 (332)
Q Consensus 315 ~s~~~i~~~~~~~~~ 329 (332)
+|++.|++.++....
T Consensus 302 ~s~~~l~~~~~~~~~ 316 (319)
T PTZ00117 302 KSIESIQELTQKAKA 316 (319)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999887654
No 26
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=100.00 E-value=3.5e-55 Score=403.07 Aligned_cols=303 Identities=21% Similarity=0.342 Sum_probs=262.4
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCc--cceEEeCCHHHHhC
Q 019990 3 KNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLL--KGVVATTDVVEACK 80 (332)
Q Consensus 3 ~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~--~~v~~~~~~~~a~~ 80 (332)
++++||+|+| +|.+|+++++.++..++. +++|+|+++ +++.+..+|+.|...... ..+..+++. ++++
T Consensus 4 ~~~~KI~IIG-aG~vG~~ia~~la~~gl~------~i~LvDi~~--~~~~~~~ld~~~~~~~~~~~~~I~~~~d~-~~l~ 73 (321)
T PTZ00082 4 IKRRKISLIG-SGNIGGVMAYLIVLKNLG------DVVLFDIVK--NIPQGKALDISHSNVIAGSNSKVIGTNNY-EDIA 73 (321)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhCCCC------eEEEEeCCC--chhhHHHHHHHhhhhccCCCeEEEECCCH-HHhC
Confidence 4568999999 699999999998887763 799999975 356778889988643222 345544564 7899
Q ss_pred CCcEEEEecCCCCCCCC-----ChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCcEEE
Q 019990 81 DVNIAVMVGGFPRKEGM-----ERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC 155 (332)
Q Consensus 81 ~aDiVi~~ag~~~~~~~-----~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~i~~ 155 (332)
+||+||+++|.++++++ +|.+++..|+++++++++.+++++ |+++++++|||++.+++.+++. +++|++|++|
T Consensus 74 ~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~-p~a~~iv~sNP~di~t~~~~~~-sg~p~~rviG 151 (321)
T PTZ00082 74 GSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYC-PNAFVIVITNPLDVMVKLLQEH-SGLPKNKVCG 151 (321)
T ss_pred CCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHh-cCCChhhEEE
Confidence 99999999999999988 999999999999999999999998 8899999999999999999987 7899898655
Q ss_pred e-ecccHHHHHHHHHHHcCCCCCCeeeeEEEecCCCceeecccCcccccCCCCcchhhhcccccc---chhHHHHHHHhh
Q 019990 156 L-TRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVADDNW---LNTEFITTVQQR 231 (332)
Q Consensus 156 ~-t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg~~~v~~~s~~~v~~~~~~~p~~~~~~~~~~---~~~~~~~~v~~~ 231 (332)
. |.+|+.|+++.+|+++++++++|+++ |+|+||+++||+||++++ +|+|+.+++.++.+ .++++.++++++
T Consensus 152 lgt~lds~R~~~~la~~l~v~~~~v~~~-viGeHg~s~v~~~S~~~i----~g~~~~~~~~~~~~~~~~~~~i~~~~~~~ 226 (321)
T PTZ00082 152 MAGVLDSSRLRTYIAEKLGVNPRDVHAS-VIGAHGDKMVPLPRYVTV----GGIPLSEFIKKGLITQEEIDEIVERTRNT 226 (321)
T ss_pred ecCcccHHHHHHHHHHHhCCCcccceee-EEecCCCceEecceeeEE----CCEEHHHhhhcccCCHHHHHHHHHHHHHH
Confidence 5 59999999999999999999999987 579999999999999999 99999998743211 257899999999
Q ss_pred HHHHHHhcC-CcchHHHHHHHHHHHHHHHcCCCCCcEEEEEEeecCCCCCCCCeEEEEeEEEe-CCeEEEecCCCCCHHH
Q 019990 232 GAAIIKARK-LSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDGSYGIPEGLIYSFPVTCE-KGEWSIVKGLKVDEFS 309 (332)
Q Consensus 232 ~~~i~~~~g-~~~~~~~a~a~~~~i~~~~~~~~~~~i~~~~v~~~g~yg~~~~~~~s~Pv~~~-~G~~~~~~~~~l~~~E 309 (332)
+++|++.|| +++++++|.++++++.+++. |+++++|+|++++|+||+ +++|||+||++| +|++++++ ++||++|
T Consensus 227 g~~i~~~~gkg~t~~~ia~a~~~i~~ail~--d~~~v~~vs~~~~g~yg~-~~v~~s~P~~ig~~Gv~~i~~-~~l~~~E 302 (321)
T PTZ00082 227 GKEIVDLLGTGSAYFAPAAAAIEMAEAYLK--DKKRVLPCSAYLEGQYGH-KDIYMGTPAVIGANGVEKIIE-LDLTPEE 302 (321)
T ss_pred HHHHHhhcCCCccHHHHHHHHHHHHHHHHc--CCCcEEEEEEEecccCCC-CCeEEEEEEEEeCCeEEEEeC-CCCCHHH
Confidence 999999753 34457889999988877666 468999999999999999 799999999999 99999996 9999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 019990 310 RAKMDATAEELAEEKTL 326 (332)
Q Consensus 310 ~~~l~~s~~~i~~~~~~ 326 (332)
+++|++|++.|++.++.
T Consensus 303 ~~~l~~sa~~i~~~~~~ 319 (321)
T PTZ00082 303 QKKFDESIKEVKRLEAL 319 (321)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999988654
No 27
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=2e-55 Score=403.97 Aligned_cols=299 Identities=22% Similarity=0.325 Sum_probs=262.5
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcEE
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIA 85 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDiV 85 (332)
|||+|+| +|.+|++++..|+..++.. ++.++|++. +++.+.++|+.|... .........+.++++++||+|
T Consensus 1 mkI~IIG-aG~VG~~~a~~l~~~g~~~-----ev~l~D~~~--~~~~g~a~dl~~~~~-~~~~~~i~~~d~~~l~~aDiV 71 (308)
T cd05292 1 MKVAIVG-AGFVGSTTAYALLLRGLAS-----EIVLVDINK--AKAEGEAMDLAHGTP-FVKPVRIYAGDYADCKGADVV 71 (308)
T ss_pred CEEEEEC-CCHHHHHHHHHHHHcCCCC-----EEEEEECCc--hhhhhHHHHHHcccc-ccCCeEEeeCCHHHhCCCCEE
Confidence 4899999 5999999999999888643 899999864 457788999988642 222222333345789999999
Q ss_pred EEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCc-EEEeecccHHHH
Q 019990 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRA 164 (332)
Q Consensus 86 i~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~-i~~~t~l~~~r~ 164 (332)
|++++.+++++++|.+++..|+++++++++.+++++ |++++++++||+|.++++++++ +++|++| |+.+|.||+.|+
T Consensus 72 iita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~-~~giiiv~tNP~d~~~~~~~~~-sg~p~~~viG~gt~LDs~R~ 149 (308)
T cd05292 72 VITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYA-PDAILLVVTNPVDVLTYVAYKL-SGLPPNRVIGSGTVLDTARF 149 (308)
T ss_pred EEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHH-HCcCHHHeecccchhhHHHH
Confidence 999999999999999999999999999999999998 8899999999999999999998 7999999 556699999999
Q ss_pred HHHHHHHcCCCCCCeeeeEEEecCCCceeecccCcccccCCCCcchhhhcccc--c---cchhHHHHHHHhhHHHHHHhc
Q 019990 165 MGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVADD--N---WLNTEFITTVQQRGAAIIKAR 239 (332)
Q Consensus 165 ~~~~a~~~~v~~~~v~~~~V~G~hg~~~v~~~s~~~v~~~~~~~p~~~~~~~~--~---~~~~~~~~~v~~~~~~i~~~~ 239 (332)
++++|+++++++.+|+.+ |+|+||++++|+||++++ +|+|+.+++.+. . +.++++.+++++++++|++.|
T Consensus 150 ~~~la~~~~v~~~~v~~~-viGeHg~~~~~~~S~~~v----~g~~~~~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii~~k 224 (308)
T cd05292 150 RYLLGEHLGVDPRSVHAY-IIGEHGDSEVAVWSSANI----GGVPLDEFCKLCGRPFDEEVREEIFEEVRNAAYEIIERK 224 (308)
T ss_pred HHHHHHHhCCCccceece-eeccCCCcEEecceeeeE----CCEEHHHHhhhcccccCHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999987 689999999999999999 999999987542 1 236789999999999999999
Q ss_pred CCcchHHHHHHHHHHHHHHHcCCCCCcEEEEEEeecCCCCCCCCeEEEEeEEEe-CCeEEEecCCCCCHHHHHHHHHHHH
Q 019990 240 KLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDGSYGIPEGLIYSFPVTCE-KGEWSIVKGLKVDEFSRAKMDATAE 318 (332)
Q Consensus 240 g~~~~~~~a~a~~~~i~~~~~~~~~~~i~~~~v~~~g~yg~~~~~~~s~Pv~~~-~G~~~~~~~~~l~~~E~~~l~~s~~ 318 (332)
|.|+ +++|+++++++.+++. ++++++|+|++++|+||+ +++|||+||++| +|++++++ ++||++|+++|++|++
T Consensus 225 g~t~-~~~a~a~~~i~~ail~--~~~~v~~~s~~~~g~yg~-~~~~~s~P~~ig~~Gv~~i~~-~~L~~~E~~~l~~s~~ 299 (308)
T cd05292 225 GATY-YAIGLALARIVEAILR--DENSVLTVSSLLDGQYGI-KDVALSLPCIVGRSGVERVLP-PPLSEEEEEALRASAE 299 (308)
T ss_pred CccH-HHHHHHHHHHHHHHHc--CCCcEEEEEEEEcccCCC-CCEEEEEEEEEeCCceEEecC-CCCCHHHHHHHHHHHH
Confidence 9775 5668899988887665 468999999999999998 799999999999 99999996 9999999999999999
Q ss_pred HHHHHHH
Q 019990 319 ELAEEKT 325 (332)
Q Consensus 319 ~i~~~~~ 325 (332)
.|++.++
T Consensus 300 ~i~~~~~ 306 (308)
T cd05292 300 VLKEAIE 306 (308)
T ss_pred HHHHHHh
Confidence 9998876
No 28
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=100.00 E-value=3.2e-55 Score=402.18 Aligned_cols=303 Identities=24% Similarity=0.390 Sum_probs=266.2
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCC--ccceEEeCCHHHHhCCCc
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPL--LKGVVATTDVVEACKDVN 83 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~--~~~v~~~~~~~~a~~~aD 83 (332)
|||+|+||+|.+|++++..|+..++.+ +|+++|++...+++.+..+|+.|..... ...+....+ ++++++||
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~-----~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d-~~~l~~aD 74 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVK-----EINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSD-LSDVAGSD 74 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCC-----EEEEEECcccccccccccchhhhchhccCCCcEEEECCC-HHHhCCCC
Confidence 589999988999999999999988754 8999999543357888899998753222 224544445 56799999
Q ss_pred EEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCcEE-EeecccHH
Q 019990 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNIT-CLTRLDHN 162 (332)
Q Consensus 84 iVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~i~-~~t~l~~~ 162 (332)
+||+++|.|++++++|.+++..|+++++++++.+.+++ |++++++++||++.++++++++ +++|+++++ .+|.||+.
T Consensus 75 iViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~-~~~~viv~~npvd~~t~~~~~~-~g~~~~~viG~gt~LDs~ 152 (309)
T cd05294 75 IVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFA-PDTKILVVTNPVDVMTYKALKE-SGFDKNRVFGLGTHLDSL 152 (309)
T ss_pred EEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCchHHHHHHHHHh-cCCCHHHEeeccchHHHH
Confidence 99999999999999999999999999999999999998 8999999999999999999998 789999955 55899999
Q ss_pred HHHHHHHHHcCCCCCCeeeeEEEecCCCceeecccCcccccCCCCcchhhhccccccchhHHHHHHHhhHHHHHHhcCCc
Q 019990 163 RAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIKARKLS 242 (332)
Q Consensus 163 r~~~~~a~~~~v~~~~v~~~~V~G~hg~~~v~~~s~~~v~~~~~~~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~~~g~~ 242 (332)
|+++++|+++++++++|+++ |+|+||++++|+||++++ +|+|+.+++..+++..+++.+++++++++|++.||++
T Consensus 153 R~~~~la~~l~v~~~~v~~~-viGeHg~s~~~~~S~~~i----~g~~~~~~~~~~~~~~~~i~~~v~~~g~~i~~~kg~t 227 (309)
T cd05294 153 RFKVAIAKHFNVHISEVHTR-IIGEHGDSMVPLISSTSI----GGIPIKRFPEYKDFDVEKIVETVKNAGQNIISLKGGS 227 (309)
T ss_pred HHHHHHHHHHCcChHHeEEE-EEecCCCceEeeeeecEE----CCEEHHHhhcccHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 99999999999999999987 579999999999999999 9999999875434556889999999999999999987
Q ss_pred chHHHHHHHHHHHHHHHcCCCCCcEEEEEEeecCCC-CCCCCeEEEEeEEEe-CCeEEEecCCCCCHHHHHHHHHHHHHH
Q 019990 243 SALSAASSACDHIRDWVLGTPKGTWVSMGVYSDGSY-GIPEGLIYSFPVTCE-KGEWSIVKGLKVDEFSRAKMDATAEEL 320 (332)
Q Consensus 243 ~~~~~a~a~~~~i~~~~~~~~~~~i~~~~v~~~g~y-g~~~~~~~s~Pv~~~-~G~~~~~~~~~l~~~E~~~l~~s~~~i 320 (332)
+ +++|.++++++.+++. +++.++|++++.+|+| |++ ++|+|+||+++ +|++++++ ++|+++|+++|++|++.|
T Consensus 228 ~-~~~a~~~~~ii~ail~--~~~~v~~vsv~~~g~~~~~~-~~~~svP~~ig~~Gv~~i~~-l~l~~~E~~~l~~s~~~i 302 (309)
T cd05294 228 E-YGPASAISNLVRTIAN--DERRILTVSTYLEGEIDGIR-DVCIGVPVKLGKNGIEEIVP-IEMDDDEREAFRKSAEIV 302 (309)
T ss_pred h-hhHHHHHHHHHHHHHC--CCCeEEEEEEEECCccCCCC-CeEEEeEEEEcCCccEEEeC-CCCCHHHHHHHHHHHHHH
Confidence 6 5778999988877665 4579999999999998 995 99999999999 99999996 999999999999999999
Q ss_pred HHHHHH
Q 019990 321 AEEKTL 326 (332)
Q Consensus 321 ~~~~~~ 326 (332)
++.++.
T Consensus 303 ~~~~~~ 308 (309)
T cd05294 303 KKYTRE 308 (309)
T ss_pred HHHHhc
Confidence 987653
No 29
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=100.00 E-value=5.2e-55 Score=399.84 Aligned_cols=298 Identities=26% Similarity=0.395 Sum_probs=258.2
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccC--CccceEEeCCHHHHhCCCc
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFP--LLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~--~~~~v~~~~~~~~a~~~aD 83 (332)
|||+|+| +|.+|+.++..|+..++. +|+++|+.+ +...+...|+.|.... ....++.+.+. +.+++||
T Consensus 2 ~KV~VIG-aG~vG~~iA~~la~~g~~------~VvlvDi~~--~l~~g~a~d~~~~~~~~~~~~~i~~t~d~-~~~~~aD 71 (305)
T TIGR01763 2 KKISVIG-AGFVGATTAFRLAEKELA------DLVLLDVVE--GIPQGKALDMYEASPVGGFDTKVTGTNNY-ADTANSD 71 (305)
T ss_pred CEEEEEC-cCHHHHHHHHHHHHcCCC------eEEEEeCCC--ChhHHHHHhhhhhhhccCCCcEEEecCCH-HHhCCCC
Confidence 5899999 699999999999987752 699999964 3556677777765321 12356555665 4589999
Q ss_pred EEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCcEEEe-ecccHH
Q 019990 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCL-TRLDHN 162 (332)
Q Consensus 84 iVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~i~~~-t~l~~~ 162 (332)
+||+++|.|++++++|.+++..|.++++++++.+.+++ |++++|++|||+|+++++++++ +++|++|++|. |.||+.
T Consensus 72 iVIitag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~-p~~~iIv~tNP~di~t~~~~~~-sg~~~~rviG~g~~lds~ 149 (305)
T TIGR01763 72 IVVITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHS-PNPIIVVVSNPLDAMTYVAWQK-SGFPKERVIGQAGVLDSA 149 (305)
T ss_pred EEEEcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHH-HCcCHHHEEEeccchHHH
Confidence 99999999999999999999999999999999999997 8999999999999999999998 79999996555 699999
Q ss_pred HHHHHHHHHcCCCCCCeeeeEEEecCCCceeecccCcccccCCCCcchhhhccccccchhHHHHHHHhhHHHHHHhcC-C
Q 019990 163 RAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIKARK-L 241 (332)
Q Consensus 163 r~~~~~a~~~~v~~~~v~~~~V~G~hg~~~v~~~s~~~v~~~~~~~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~~~g-~ 241 (332)
|+++.+|+++++++++|+++ ||||||++++|+||++++ +|+|+.+++.++. ++++.+++++++++|++.+| +
T Consensus 150 R~~~~la~~l~v~~~~v~~~-v~GeHg~s~~~~wS~~~i----~g~~~~~~~~~~~--~~~l~~~v~~~g~~ii~~~~kg 222 (305)
T TIGR01763 150 RFRTFIAMELGVSVQDVTAC-VLGGHGDAMVPLVRYSTV----AGIPVADLISAER--IAEIVERTRKGGGEIVNLLKQG 222 (305)
T ss_pred HHHHHHHHHhCcCHHHeeee-EEecCCCcEEeeeeeeEE----CCEEHHHhcCHHH--HHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999997 689999999999999999 9999999876542 57899999999999999844 2
Q ss_pred cchHHHHHHHHHHHHHHHcCCCCCcEEEEEEeecCCCCCCCCeEEEEeEEEe-CCeEEEecCCCCCHHHHHHHHHHHHHH
Q 019990 242 SSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDGSYGIPEGLIYSFPVTCE-KGEWSIVKGLKVDEFSRAKMDATAEEL 320 (332)
Q Consensus 242 ~~~~~~a~a~~~~i~~~~~~~~~~~i~~~~v~~~g~yg~~~~~~~s~Pv~~~-~G~~~~~~~~~l~~~E~~~l~~s~~~i 320 (332)
++++++|+++++++.+ +.+ |+++++|+|++++|+||+ +++|||+||++| +|+.++++ ++|+++|+++|++|++.|
T Consensus 223 ~t~~~~a~~~~~i~~a-i~~-~~~~v~~~s~~~~~~yg~-~~v~~s~P~~ig~~Gv~~i~~-~~l~~~E~~~l~~s~~~i 298 (305)
T TIGR01763 223 SAYYAPAASVVEMVEA-ILK-DRKRVLPCAAYLDGQYGI-DGIYVGVPVILGKNGVEHIYE-LKLDQSELALLNKSAKIV 298 (305)
T ss_pred ChHHHHHHHHHHHHHH-HhC-CCCeEEEEEEEecccCCC-CceEEEEEEEEeCCeEEEEeC-CCCCHHHHHHHHHHHHHH
Confidence 3446778999876655 554 468999999999999998 799999999999 99999996 999999999999999999
Q ss_pred HHHHHH
Q 019990 321 AEEKTL 326 (332)
Q Consensus 321 ~~~~~~ 326 (332)
++.+++
T Consensus 299 ~~~~~~ 304 (305)
T TIGR01763 299 DENCKM 304 (305)
T ss_pred HHHHhc
Confidence 988753
No 30
>PLN00106 malate dehydrogenase
Probab=100.00 E-value=5.3e-54 Score=393.33 Aligned_cols=294 Identities=26% Similarity=0.378 Sum_probs=251.4
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCC-ccceEEeCCHHHHhCCCc
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPL-LKGVVATTDVVEACKDVN 83 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~-~~~v~~~~~~~~a~~~aD 83 (332)
+.||+||||+|.||+++++.|..+++++ +++|+|++. +.+.++||.|+.... ..++...++++++++|+|
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~-----el~L~Di~~----~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aD 88 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVS-----ELHLYDIAN----TPGVAADVSHINTPAQVRGFLGDDQLGDALKGAD 88 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCC-----EEEEEecCC----CCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCC
Confidence 5799999988999999999999888765 999999964 578889999976432 123334556789999999
Q ss_pred EEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChh----hHHHHHHHHCCCCCCCcEEEeecc
Q 019990 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPAN----TNALILKEFAPSIPAKNITCLTRL 159 (332)
Q Consensus 84 iVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~----~~~~~~~~~~~~~~~~~i~~~t~l 159 (332)
+|||+||.+++++++|.+++..|+++++++++.+++++ |+++++++|||+| ++++.+++. +++||++++|.++|
T Consensus 89 iVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~-p~aivivvSNPvD~~~~i~t~~~~~~-s~~p~~~viG~~~L 166 (323)
T PLN00106 89 LVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHC-PNALVNIISNPVNSTVPIAAEVLKKA-GVYDPKKLFGVTTL 166 (323)
T ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCCccccHHHHHHHHHHc-CCCCcceEEEEecc
Confidence 99999999999999999999999999999999999998 8999999999999 888888886 88999999888899
Q ss_pred cHHHHHHHHHHHcCCCCCCeeeeEEEecCC-CceeecccCcccccCCCCcchhhhccccccchhHHHHHHHhhHHHHHHh
Q 019990 160 DHNRAMGQISERLKVHVSDVKNVIIWGNHS-STQYPDVNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIKA 238 (332)
Q Consensus 160 ~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg-~~~v~~~s~~~v~~~~~~~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~~ 238 (332)
|++|+++++|+++|+++.+|+++ |+|+|| +++||+||++.+ . .+ +.++ .++++.+++++++++|++.
T Consensus 167 Ds~Rl~~~lA~~lgv~~~~V~~~-ViGeHg~~s~vp~~S~~~~----~----~~-~~~~--~~~~i~~~v~~~g~~Ii~~ 234 (323)
T PLN00106 167 DVVRANTFVAEKKGLDPADVDVP-VVGGHAGITILPLLSQATP----K----VS-FTDE--EIEALTKRIQNGGTEVVEA 234 (323)
T ss_pred hHHHHHHHHHHHhCCChhheEEE-EEEeCCCccEeeehhccee----c----cc-CCHH--HHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999987 579997 599999999975 2 22 2222 2578999999999999998
Q ss_pred c-C-CcchHHHHHHHHHHHHHHHcCC-CCCcEEEEEEeecCCCCCCCCeEEEEeEEEe-CCeEEEecCC-CCCHHHHHHH
Q 019990 239 R-K-LSSALSAASSACDHIRDWVLGT-PKGTWVSMGVYSDGSYGIPEGLIYSFPVTCE-KGEWSIVKGL-KVDEFSRAKM 313 (332)
Q Consensus 239 ~-g-~~~~~~~a~a~~~~i~~~~~~~-~~~~i~~~~v~~~g~yg~~~~~~~s~Pv~~~-~G~~~~~~~~-~l~~~E~~~l 313 (332)
| | .++++++|.++++++.+++.++ +++.++|+| +.+++| ..++|||+||++| +|++++++ + +|+++|+++|
T Consensus 235 k~~kg~t~~~~a~a~~~ii~ail~~~~~~~~v~~~s-~~~~~~--~~~v~~s~P~~ig~~Gv~~i~~-~~~L~~~E~~~l 310 (323)
T PLN00106 235 KAGAGSATLSMAYAAARFADACLRGLNGEADVVECS-YVQSEV--TELPFFASKVRLGRNGVEEVLG-LGPLSEYEQKGL 310 (323)
T ss_pred ccCCCCchHHHHHHHHHHHHHHHhccCCCceEEEEE-EECccc--CCceEEEEEEEEcCCeeEEEcC-CCCCCHHHHHHH
Confidence 5 2 3556788999999888877742 256899999 666665 2349999999999 99999996 8 9999999999
Q ss_pred HHHHHHHHHHHH
Q 019990 314 DATAEELAEEKT 325 (332)
Q Consensus 314 ~~s~~~i~~~~~ 325 (332)
++|++.|++.++
T Consensus 311 ~~S~~~i~~~~~ 322 (323)
T PLN00106 311 EALKPELKASIE 322 (323)
T ss_pred HHHHHHHHHHhh
Confidence 999999998875
No 31
>PRK05086 malate dehydrogenase; Provisional
Probab=100.00 E-value=1.2e-53 Score=391.83 Aligned_cols=298 Identities=22% Similarity=0.315 Sum_probs=254.9
Q ss_pred cEEEEEcCCChhHHHHHHHHHh-cccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEE--eCCHHHHhCCC
Q 019990 6 LRVLVTGAAGQIGYALVPMIAR-GIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVA--TTDVVEACKDV 82 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~-~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~--~~~~~~a~~~a 82 (332)
|||+|+||+|.||+++++.|.. .+.. .+++++|+++ ...+..+|+.|.. ....+.. ..+++++++++
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~-----~el~L~d~~~---~~~g~alDl~~~~--~~~~i~~~~~~d~~~~l~~~ 70 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAG-----SELSLYDIAP---VTPGVAVDLSHIP--TAVKIKGFSGEDPTPALEGA 70 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCc-----cEEEEEecCC---CCcceehhhhcCC--CCceEEEeCCCCHHHHcCCC
Confidence 5899999889999999998865 4443 3899999863 2456778887741 1123332 35667899999
Q ss_pred cEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHH----HHCCCCCCCcEEEeec
Q 019990 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILK----EFAPSIPAKNITCLTR 158 (332)
Q Consensus 83 DiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~----~~~~~~~~~~i~~~t~ 158 (332)
|+||+++|.+++++++|.+++..|+++++++++++++++ |+++++++|||+|+|+++++ ++ +++|++|++|.|.
T Consensus 71 DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~-~~~ivivvsNP~D~~t~~~~~~~~~~-sg~p~~rvig~~~ 148 (312)
T PRK05086 71 DVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTC-PKACIGIITNPVNTTVAIAAEVLKKA-GVYDKNKLFGVTT 148 (312)
T ss_pred CEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccCchHHHHHHHHHHHHHh-cCCCHHHEEeeec
Confidence 999999999999999999999999999999999999997 89999999999999999987 65 7899999888888
Q ss_pred ccHHHHHHHHHHHcCCCCCCeeeeEEEecCCC-ceeecccCcccccCCCCcchhhhccccccchhHHHHHHHhhHHHHHH
Q 019990 159 LDHNRAMGQISERLKVHVSDVKNVIIWGNHSS-TQYPDVNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIK 237 (332)
Q Consensus 159 l~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg~-~~v~~~s~~~v~~~~~~~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~ 237 (332)
||+.|+++++|+++|+++++|+.+ ||||||+ ++||+||++ +|.|+.+ + .++++.+++++++++|++
T Consensus 149 Lds~R~~~~ia~~l~~~~~~v~~~-v~GeHg~~s~~p~~S~~------~g~~l~~----~--~~~~i~~~v~~~g~~ii~ 215 (312)
T PRK05086 149 LDVIRSETFVAELKGKQPGEVEVP-VIGGHSGVTILPLLSQV------PGVSFTE----Q--EVADLTKRIQNAGTEVVE 215 (312)
T ss_pred HHHHHHHHHHHHHhCCChhheEEE-EEEecCCCceecccccc------CCccCCH----H--HHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999976 6999986 999999997 4677732 2 257899999999999999
Q ss_pred hc--CCcchHHHHHHHHHHHHHHHcC-CCCCcEEEEEEeecCCCCCCCCeEEEEeEEEe-CCeEEEecCC-CCCHHHHHH
Q 019990 238 AR--KLSSALSAASSACDHIRDWVLG-TPKGTWVSMGVYSDGSYGIPEGLIYSFPVTCE-KGEWSIVKGL-KVDEFSRAK 312 (332)
Q Consensus 238 ~~--g~~~~~~~a~a~~~~i~~~~~~-~~~~~i~~~~v~~~g~yg~~~~~~~s~Pv~~~-~G~~~~~~~~-~l~~~E~~~ 312 (332)
.| ++++++++|.++++++.+++.+ .++++++|++ +.+|+ |. .++|||+||++| +|++++++ + +|+++|+++
T Consensus 216 ~k~~~g~t~~~~a~a~~~~v~ai~~~~~~~~~v~~~~-~~~~~-g~-~~v~~s~P~~ig~~Gv~~i~~-~~~L~~~E~~~ 291 (312)
T PRK05086 216 AKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECA-YVEGD-GK-YARFFAQPVLLGKNGVEERLP-IGTLSAFEQNA 291 (312)
T ss_pred cccCCCCchhhHHHHHHHHHHHHHhcCCCCCcEEEEE-EEecc-CC-cceEEEEEEEEcCCeeEEEcC-CCCCCHHHHHH
Confidence 88 2355678899999988888754 3467899976 77876 76 789999999999 99999996 7 999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhC
Q 019990 313 MDATAEELAEEKTLAYSCLN 332 (332)
Q Consensus 313 l~~s~~~i~~~~~~~~~~~~ 332 (332)
|++|++.|++.++++++|+.
T Consensus 292 l~~s~~~i~~~~~~g~~~~~ 311 (312)
T PRK05086 292 LEGMLDTLKKDIALGEEFVN 311 (312)
T ss_pred HHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999963
No 32
>PRK06223 malate dehydrogenase; Reviewed
Probab=100.00 E-value=1.3e-51 Score=379.93 Aligned_cols=298 Identities=25% Similarity=0.393 Sum_probs=259.2
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCc--cceEEeCCHHHHhCCC
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLL--KGVVATTDVVEACKDV 82 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~--~~v~~~~~~~~a~~~a 82 (332)
|+||+|+|| |.+|++++..++..++. +++|+|+++ +++++..+|+.+...... ..++.+++. +++++|
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~------ev~L~D~~~--~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~a 71 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELG------DVVLFDIVE--GVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGS 71 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCe------EEEEEECCC--chhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCC
Confidence 579999995 99999999999887651 899999964 467788888877643322 244444554 679999
Q ss_pred cEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCcEEEe-ecccH
Q 019990 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCL-TRLDH 161 (332)
Q Consensus 83 DiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~i~~~-t~l~~ 161 (332)
|+||+++|.|++++++|.+.+..|++.++++++.+++++ |+++++++|||+|.++++++++ +++|+++++|. |.+|+
T Consensus 72 DiVii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~-~~~~viv~tNP~d~~~~~~~~~-s~~~~~~viG~gt~lds 149 (307)
T PRK06223 72 DVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYA-PDAIVIVVTNPVDAMTYVALKE-SGFPKNRVIGMAGVLDS 149 (307)
T ss_pred CEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHH-hCCCcccEEEeCCCcHH
Confidence 999999999999999999999999999999999999998 8889999999999999999998 79999996555 69999
Q ss_pred HHHHHHHHHHcCCCCCCeeeeEEEecCCCceeecccCcccccCCCCcchhhhccccccchhHHHHHHHhhHHHHHHh--c
Q 019990 162 NRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIKA--R 239 (332)
Q Consensus 162 ~r~~~~~a~~~~v~~~~v~~~~V~G~hg~~~v~~~s~~~v~~~~~~~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~~--~ 239 (332)
.|+++++|+++++++++|++++ +|+||++++|+||++++ +|.|+.+++.+ +| .+++.+.+++++++|++. |
T Consensus 150 ~r~~~~la~~l~v~~~~v~~~v-iGehg~s~~p~~S~~~v----~g~~~~~~~~~-~~-~~~l~~~v~~~~~~ii~~~~k 222 (307)
T PRK06223 150 ARFRTFIAEELNVSVKDVTAFV-LGGHGDSMVPLVRYSTV----GGIPLEDLLSK-EK-LDEIVERTRKGGAEIVGLLKT 222 (307)
T ss_pred HHHHHHHHHHhCcChhhCcccE-EcCCCCcceEchhhCEE----CCEEHHHhCCh-HH-HHHHHHHHHHHHHHHHhhccc
Confidence 9999999999999999999875 79999999999999999 99999998543 44 578999999999999997 5
Q ss_pred CCcchHHHHHHHHHHHHHHHcCCCCCcEEEEEEeecCCCCCCCCeEEEEeEEEe-CCeEEEecCCCCCHHHHHHHHHHHH
Q 019990 240 KLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDGSYGIPEGLIYSFPVTCE-KGEWSIVKGLKVDEFSRAKMDATAE 318 (332)
Q Consensus 240 g~~~~~~~a~a~~~~i~~~~~~~~~~~i~~~~v~~~g~yg~~~~~~~s~Pv~~~-~G~~~~~~~~~l~~~E~~~l~~s~~ 318 (332)
|++ +++.|.++++++.+++. +++.++|++++++|+||+ +++|||+||+++ +|++++++ ++||++|+++|++|++
T Consensus 223 g~t-~~~~A~~~~~ii~ail~--~~~~~~~~~v~~~g~yg~-~~~~~s~P~~i~~~Gv~~i~~-~~l~~~e~~~l~~s~~ 297 (307)
T PRK06223 223 GSA-YYAPAASIAEMVEAILK--DKKRVLPCSAYLEGEYGV-KDVYVGVPVKLGKNGVEKIIE-LELDDEEKAAFDKSVE 297 (307)
T ss_pred CCh-hHHHHHHHHHHHHHHHc--CCCcEEEEEEEecCcCCC-CCeEEEeEEEEeCCeEEEEeC-CCCCHHHHHHHHHHHH
Confidence 544 56678888887777665 458999999999999999 899999999999 99999985 9999999999999999
Q ss_pred HHHHHHHH
Q 019990 319 ELAEEKTL 326 (332)
Q Consensus 319 ~i~~~~~~ 326 (332)
.|++.++.
T Consensus 298 ~l~~~~~~ 305 (307)
T PRK06223 298 AVKKLIEA 305 (307)
T ss_pred HHHHHHHh
Confidence 99998875
No 33
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=100.00 E-value=1.2e-51 Score=378.56 Aligned_cols=293 Identities=27% Similarity=0.406 Sum_probs=254.7
Q ss_pred EEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCc--cceEEeCCHHHHhCCCcEE
Q 019990 8 VLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLL--KGVVATTDVVEACKDVNIA 85 (332)
Q Consensus 8 I~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~--~~v~~~~~~~~a~~~aDiV 85 (332)
|+|+| +|.+|+.++..|+..++. +|+|+|+++ +++.+..+|+.+...... ..++.+.+ ++++++||+|
T Consensus 1 I~IIG-aG~vG~~ia~~la~~~l~------eV~L~Di~e--~~~~g~~~dl~~~~~~~~~~~~I~~t~d-~~~l~dADiV 70 (300)
T cd01339 1 ISIIG-AGNVGATLAQLLALKELG------DVVLLDIVE--GLPQGKALDISQAAPILGSDTKVTGTND-YEDIAGSDVV 70 (300)
T ss_pred CEEEC-CCHHHHHHHHHHHhCCCc------EEEEEeCCC--cHHHHHHHHHHHhhhhcCCCeEEEEcCC-HHHhCCCCEE
Confidence 68999 599999999999887752 899999975 466777788877542222 34554455 5779999999
Q ss_pred EEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCcEEEe-ecccHHHH
Q 019990 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCL-TRLDHNRA 164 (332)
Q Consensus 86 i~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~i~~~-t~l~~~r~ 164 (332)
|+++|.|++++++|.+.+..|.++++++++.+++++ |+++++++|||++.++++++++ +++|++|++|. |.+|+.|+
T Consensus 71 Iit~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~-p~~~iIv~sNP~di~t~~~~~~-s~~~~~rviGlgt~lds~r~ 148 (300)
T cd01339 71 VITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKYA-PNAIVIVVTNPLDVMTYVAYKA-SGFPRNRVIGMAGVLDSARF 148 (300)
T ss_pred EEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHH-hCCCHHHEEEecchHHHHHH
Confidence 999999999999999999999999999999999998 8889999999999999999997 78999996555 58999999
Q ss_pred HHHHHHHcCCCCCCeeeeEEEecCCCceeecccCcccccCCCCcchhhhccccccchhHHHHHHHhhHHHHHHhc--CCc
Q 019990 165 MGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIKAR--KLS 242 (332)
Q Consensus 165 ~~~~a~~~~v~~~~v~~~~V~G~hg~~~v~~~s~~~v~~~~~~~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~~~--g~~ 242 (332)
++++|+++++++.+|++++ +|+||++++|+||++++ +|+|+.+++.++. ++++.+++++++++|++.| |++
T Consensus 149 ~~~la~~l~v~~~~v~~~v-~G~hg~~~~~~~s~~~v----~g~~~~~~~~~~~--~~~~~~~v~~~~~~ii~~k~~g~t 221 (300)
T cd01339 149 RYFIAEELGVSVKDVQAMV-LGGHGDTMVPLPRYSTV----GGIPLTELITKEE--IDEIVERTRNGGAEIVNLLKTGSA 221 (300)
T ss_pred HHHHHHHhCCCccceEEEE-EeCCCCcceecceecEE----CCEEHHHhcChHH--HHHHHHHHHHHHHHHHhhcCCCch
Confidence 9999999999999999875 79999999999999999 9999999876653 5789999999999999987 544
Q ss_pred chHHHHHHHHHHHHHHHcCCCCCcEEEEEEeecCCCCCCCCeEEEEeEEEe-CCeEEEecCCCCCHHHHHHHHHHHHHHH
Q 019990 243 SALSAASSACDHIRDWVLGTPKGTWVSMGVYSDGSYGIPEGLIYSFPVTCE-KGEWSIVKGLKVDEFSRAKMDATAEELA 321 (332)
Q Consensus 243 ~~~~~a~a~~~~i~~~~~~~~~~~i~~~~v~~~g~yg~~~~~~~s~Pv~~~-~G~~~~~~~~~l~~~E~~~l~~s~~~i~ 321 (332)
++++|+++++++.+++. +++.++|+|++++|+||++ ++|||+||+++ +|++++++ ++||++|+++|++|++.|+
T Consensus 222 -~~~~a~~~~~i~~ail~--~~~~i~~~s~~~~g~yg~~-~~~~s~P~~ig~~G~~~~~~-l~l~~~E~~~l~~s~~~l~ 296 (300)
T cd01339 222 -YYAPAAAIAEMVEAILK--DKKRVLPCSAYLEGEYGIK-DIFVGVPVVLGKNGVEKIIE-LDLTDEEKEAFDKSVESVK 296 (300)
T ss_pred -hHHHHHHHHHHHHHHHc--CCCcEEEEEEEeccccCCC-CeEEEEEEEEeCCeEEEEeC-CCCCHHHHHHHHHHHHHHH
Confidence 46678889887766555 4689999999999999995 99999999999 99999985 9999999999999999999
Q ss_pred HHH
Q 019990 322 EEK 324 (332)
Q Consensus 322 ~~~ 324 (332)
+.+
T Consensus 297 ~~~ 299 (300)
T cd01339 297 ELI 299 (300)
T ss_pred HHh
Confidence 865
No 34
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=3.4e-48 Score=333.89 Aligned_cols=301 Identities=26% Similarity=0.336 Sum_probs=252.8
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCC-ccceEEeCCHHHHhCCC
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPL-LKGVVATTDVVEACKDV 82 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~-~~~v~~~~~~~~a~~~a 82 (332)
++.||+|.||+|-||+.|..+|+.+.+.+ ++.|||+. ...|...||.|++... ...+....+++++++++
T Consensus 27 ~~~KVAvlGAaGGIGQPLSLLlK~np~Vs-----~LaLYDi~----~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~a 97 (345)
T KOG1494|consen 27 RGLKVAVLGAAGGIGQPLSLLLKLNPLVS-----ELALYDIA----NTPGVAADLSHINTNSSVVGFTGADGLENALKGA 97 (345)
T ss_pred CcceEEEEecCCccCccHHHHHhcCcccc-----eeeeeecc----cCCcccccccccCCCCceeccCChhHHHHHhcCC
Confidence 46899999999999999999998877654 89999996 4678999999987543 24555566899999999
Q ss_pred cEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHC---CCCCCCcEEEeecc
Q 019990 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFA---PSIPAKNITCLTRL 159 (332)
Q Consensus 83 DiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~---~~~~~~~i~~~t~l 159 (332)
|+||+.||+||+||++|+|++..|+.++++++.++.++| |++++.++|||+|...+++.+.. ..|+|++++|.|+|
T Consensus 98 dvVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~c-P~A~i~vIsNPVNstVPIaaevlKk~G~ydpkklfGVTtL 176 (345)
T KOG1494|consen 98 DVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCC-PNALILVISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTL 176 (345)
T ss_pred CEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhC-ccceeEeecCcccccchHHHHHHHHcCCCCccceeceehh
Confidence 999999999999999999999999999999999999999 89999999999998777664432 45899999999999
Q ss_pred cHHHHHHHHHHHcCCCCCC-eeeeEEEecCC-CceeecccCcccccCCCCcchhhhccccccchhHHHHHHHhhHHHHHH
Q 019990 160 DHNRAMGQISERLKVHVSD-VKNVIIWGNHS-STQYPDVNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIK 237 (332)
Q Consensus 160 ~~~r~~~~~a~~~~v~~~~-v~~~~V~G~hg-~~~v~~~s~~~v~~~~~~~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~ 237 (332)
|..|.++++++..+++|.. ++. +|+|+|. .+.+|++|+... ...+ .++ ..+.|+.++|++|.|+++
T Consensus 177 DvVRA~tFv~~~~~~~p~~~v~V-PVIGGHaG~TIlPLlSQ~~p--------~~~~-~~~--~~~~Lt~RiQ~gGtEVV~ 244 (345)
T KOG1494|consen 177 DVVRANTFVAEVLNLDPAEDVDV-PVIGGHAGITIIPLLSQCKP--------PFRF-TDD--EIEALTHRIQNGGTEVVK 244 (345)
T ss_pred hhhhHHHHHHHHhCCCchhcCCc-ceecCcCCceEeeecccCCC--------cccC-CHH--HHHHHHHHHHhCCceEEE
Confidence 9999999999999999944 774 5789996 799999999876 1111 121 357899999999999999
Q ss_pred hcC--CcchHHHHHHHHHHHHHHH---cCCCCCcEEEEEEeecCCCCCCCCeEEEEeEEEe-CCeEEEecCCCCCHHHHH
Q 019990 238 ARK--LSSALSAASSACDHIRDWV---LGTPKGTWVSMGVYSDGSYGIPEGLIYSFPVTCE-KGEWSIVKGLKVDEFSRA 311 (332)
Q Consensus 238 ~~g--~~~~~~~a~a~~~~i~~~~---~~~~~~~i~~~~v~~~g~yg~~~~~~~s~Pv~~~-~G~~~~~~~~~l~~~E~~ 311 (332)
.|. .+.++|+|||.+++..+.+ .|+ ++.+.+..|+++. +++ .||+.|+++| +|++++..-.+||++|++
T Consensus 245 AKaGaGSATLSMAyAga~fa~s~lrgl~G~-~~v~ecafV~s~~-~~~---~fFaspv~Lg~~Gv~~v~~l~~lsd~E~~ 319 (345)
T KOG1494|consen 245 AKAGAGSATLSMAYAGAKFADSLLRGLNGD-EDVVECAFVASPV-TEL---PFFATPVTLGKKGVEEVLGLGKLSDYEEK 319 (345)
T ss_pred eccCCCchhhhHHHHHHHHHHHHHHHhCCC-CCeEEEeEEeccc-cCc---cceeceEEecCCceeeecCCCccCHHHHH
Confidence 996 4777999999888655444 453 4445544577764 344 6999999999 999999975589999999
Q ss_pred HHHHHHHHHHHHHHHHhhhh
Q 019990 312 KMDATAEELAEEKTLAYSCL 331 (332)
Q Consensus 312 ~l~~s~~~i~~~~~~~~~~~ 331 (332)
.|+.+..+|++.|+++.+|.
T Consensus 320 ~l~~~~~eLk~sI~KGv~F~ 339 (345)
T KOG1494|consen 320 ALEAAKPELKKSIEKGVTFV 339 (345)
T ss_pred HHHHHHHHHHHHHHhhHHHH
Confidence 99999999999999999985
No 35
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=100.00 E-value=1.5e-46 Score=338.67 Aligned_cols=258 Identities=33% Similarity=0.514 Sum_probs=230.1
Q ss_pred EEEEcCCChhHHHHHHHHHhcc--cCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCC-ccceEEeCCHHHHhCCCcE
Q 019990 8 VLVTGAAGQIGYALVPMIARGI--MLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPL-LKGVVATTDVVEACKDVNI 84 (332)
Q Consensus 8 I~VtGaaG~IGs~l~~~L~~~~--~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~-~~~v~~~~~~~~a~~~aDi 84 (332)
|+|+||+|.+|++++..|+..+ .. .+++|+|+++ +++++..+|+.|...+. ..+++.++|+++++++||+
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~-----~el~L~D~~~--~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDi 73 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLA-----IELVLYDIDE--EKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADV 73 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcc-----eEEEEEeCCc--ccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCE
Confidence 6899977999999999998877 32 3999999965 57888999998876444 3466666777899999999
Q ss_pred EEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCcEEEeecccHHHH
Q 019990 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRA 164 (332)
Q Consensus 85 Vi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~i~~~t~l~~~r~ 164 (332)
||+++|.++++|++|.+.+..|+++++++++.+++++ |+++++++|||+|.++++++++ +++|++|++|.+.+|+.|+
T Consensus 74 Vv~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~-p~a~~i~~tNP~d~~t~~~~~~-sg~~~~kviG~~~ld~~r~ 151 (263)
T cd00650 74 VIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYS-PDAWIIVVSNPVDIITYLVWRY-SGLPKEKVIGLGTLDPIRF 151 (263)
T ss_pred EEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHH-hCCCchhEEEeecchHHHH
Confidence 9999999999999999999999999999999999998 9999999999999999999998 7899999766666999999
Q ss_pred HHHHHHHcCCCCCCeeeeEEEecCCCceeecccCcccccCCCCcchhhhccccccchhHHHHHHHhhHHHHHHhcCCcch
Q 019990 165 MGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIKARKLSSA 244 (332)
Q Consensus 165 ~~~~a~~~~v~~~~v~~~~V~G~hg~~~v~~~s~~~v~~~~~~~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~~~g~~~~ 244 (332)
++.+|+++++++++|+.+ |||+||++++|+||+++
T Consensus 152 ~~~la~~l~v~~~~v~~~-v~G~hg~~~~~~~s~~~-------------------------------------------- 186 (263)
T cd00650 152 RRILAEKLGVDPDDVKVY-ILGEHGGSQVPDWSTVR-------------------------------------------- 186 (263)
T ss_pred HHHHHHHhCCCccceEEE-EEEcCCCceEeccccch--------------------------------------------
Confidence 999999999999999965 69999999999999743
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEEEEeecCCCCCCCCeEEEEeEEEe-CCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 019990 245 LSAASSACDHIRDWVLGTPKGTWVSMGVYSDGSYGIPEGLIYSFPVTCE-KGEWSIVKGLKVDEFSRAKMDATAEELAEE 323 (332)
Q Consensus 245 ~~~a~a~~~~i~~~~~~~~~~~i~~~~v~~~g~yg~~~~~~~s~Pv~~~-~G~~~~~~~~~l~~~E~~~l~~s~~~i~~~ 323 (332)
+|.++++++.+++.+ ++.++|++++++|+||+++++|||+||+++ +|++++++ ++|+++|+++|++|++.++..
T Consensus 187 --~a~~~~~ii~ai~~~--~~~~~~v~v~~~g~ygi~~~~~~s~P~~i~~~Gi~~~~~-~~l~~~e~~~l~~s~~~~~~~ 261 (263)
T cd00650 187 --IATSIADLIRSLLND--EGEILPVGVRNNGQIGIPDDVVVSVPCIVGKNGVEEPIE-VGLTDFELEKLQKSADTLKKE 261 (263)
T ss_pred --HHHHHHHHHHHHHcC--CCEEEEEEEEeCCccCCcCCEEEEEEEEEeCCceEEEec-CCCCHHHHHHHHHHHHHHHHH
Confidence 467788878776664 589999999999999988999999999999 99999996 999999999999999999876
Q ss_pred H
Q 019990 324 K 324 (332)
Q Consensus 324 ~ 324 (332)
+
T Consensus 262 ~ 262 (263)
T cd00650 262 L 262 (263)
T ss_pred h
Confidence 5
No 36
>PF02866 Ldh_1_C: lactate/malate dehydrogenase, alpha/beta C-terminal domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR022383 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the C-terminal, and is thought to be an is an unusual alpha+beta fold.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process; PDB: 4MDH_B 5MDH_A 1GV0_A 1GUZ_D 2EWD_B 2FRM_D 2FNZ_B 2FN7_B 2FM3_A 1LTH_T ....
Probab=100.00 E-value=9.7e-37 Score=258.01 Aligned_cols=167 Identities=31% Similarity=0.431 Sum_probs=152.7
Q ss_pred ecccHHHHHHHHHHHcCCCCCCeeeeEEEecCCCceeecccCcccccCCCCcchhhhccc----cccchhHHHHHHHhhH
Q 019990 157 TRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVAD----DNWLNTEFITTVQQRG 232 (332)
Q Consensus 157 t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg~~~v~~~s~~~v~~~~~~~p~~~~~~~----~~~~~~~~~~~v~~~~ 232 (332)
|.||+.|+++++|+++|++|.+++.+ |||+||+++||+||++++ +|.|+.++... .+|..+++.+++++++
T Consensus 1 T~LDs~R~~~~la~~l~v~~~~v~~~-ViGeHg~s~~~~~S~~~v----~g~pl~~~~~~~~~~~~~~~~~l~~~v~~~g 75 (174)
T PF02866_consen 1 TMLDSARFRYFLAEKLGVNPSSVNAY-VIGEHGDSQVPDWSHAKV----GGVPLLSYAKPSGKLSEEELEELTERVRKAG 75 (174)
T ss_dssp THHHHHHHHHHHHHHHTSGGGGEEEE-EEBSSSTTEEEEGGGEEE----TTEEHHHHHHTTTSSSHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHCcCccceEEE-EEecCCcceeeeeecccc----cccccccccccccchhHHhhhccccccEecc
Confidence 67999999999999999999999986 689999999999999999 99999877543 2567789999999999
Q ss_pred HHHHHhcCCcchHHHHHHHHHHHHHHHcCCCCCcEEEEEEeecCCCCCCCC-eEEEEeEEEe-CCeEEEecCCCCCHHHH
Q 019990 233 AAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDGSYGIPEG-LIYSFPVTCE-KGEWSIVKGLKVDEFSR 310 (332)
Q Consensus 233 ~~i~~~~g~~~~~~~a~a~~~~i~~~~~~~~~~~i~~~~v~~~g~yg~~~~-~~~s~Pv~~~-~G~~~~~~~~~l~~~E~ 310 (332)
++|++.|++++++++|+++++++.+++.+ .+.++|+|++++|+||++.+ +|||+||++| +|+++++++++||++|+
T Consensus 76 ~~ii~~k~g~t~~s~A~a~~~~v~ail~~--~~~i~~~sv~~~g~yg~~~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~ 153 (174)
T PF02866_consen 76 YEIIKAKGGSTSYSIAAAAARIVEAILKD--ERRILPVSVYLDGEYGIPDGCVYFSVPVVIGKNGVEKIVEDLPLSEEEQ 153 (174)
T ss_dssp HHHHHHHSSSCHHHHHHHHHHHHHHHHTT--HTEEEEEEEEEESGGGEESSSEEEEEEEEEETTEEEEEECSBSSTHHHH
T ss_pred ceeeeeccccCcCCHHHHHHHHHHHHhhc--ccccccceeccccccCcccccceecceEEEcCCeeEEEeCCCCCCHHHH
Confidence 99999996677789999999999888775 47899999999999999655 9999999999 99999996699999999
Q ss_pred HHHHHHHHHHHHHHHHHhhh
Q 019990 311 AKMDATAEELAEEKTLAYSC 330 (332)
Q Consensus 311 ~~l~~s~~~i~~~~~~~~~~ 330 (332)
++|++|++.|++.++.+++|
T Consensus 154 ~~l~~sa~~l~~~i~~~~~f 173 (174)
T PF02866_consen 154 EKLKESAKELKKEIEKGLEF 173 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999987
No 37
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=99.96 E-value=1.7e-28 Score=199.99 Aligned_cols=141 Identities=31% Similarity=0.529 Sum_probs=126.7
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcEE
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIA 85 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDiV 85 (332)
|||+|+||+|.||+++++.|+.+++.+ |++|+|+++ ++++|.++|++|...+...+.....+.++++++||+|
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~-----ei~L~D~~~--~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDiv 73 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLAD-----EIVLIDINE--DKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIV 73 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSS-----EEEEEESSH--HHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCC-----ceEEeccCc--ccceeeehhhhhhhhhcccccccccccccccccccEE
Confidence 589999988999999999999988765 999999964 4789999999998766555555555778999999999
Q ss_pred EEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCcEEE
Q 019990 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC 155 (332)
Q Consensus 86 i~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~i~~ 155 (332)
|++||.+++++++|.+++..|+++++++++.+++++ |+++++++|||+|.++++++++ +++||+|++|
T Consensus 74 vitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~-p~~~vivvtNPvd~~t~~~~~~-s~~~~~kviG 141 (141)
T PF00056_consen 74 VITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYA-PDAIVIVVTNPVDVMTYVAQKY-SGFPPNKVIG 141 (141)
T ss_dssp EETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHS-TTSEEEE-SSSHHHHHHHHHHH-HTSSGGGEEE
T ss_pred EEeccccccccccHHHHHHHhHhHHHHHHHHHHHhC-CccEEEEeCCcHHHHHHHHHHh-hCcCcccCcC
Confidence 999999999999999999999999999999999998 9999999999999999999998 8999999765
No 38
>cd05298 GH4_GlvA_pagL_like Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases. Bacillus subtilis GlvA and Clostridium acetobutylicum pagL are 6-phospho-alpha-glucosidase, catalyzing the hydrolysis of alpha-glucopyranoside bonds to release glucose from oligosaccharides. The substrate specificities of other members of this subgroup are unknown. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP_PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases, which include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. Members of this subfamily are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductas
Probab=99.88 E-value=1.6e-19 Score=172.23 Aligned_cols=300 Identities=16% Similarity=0.171 Sum_probs=184.7
Q ss_pred cEEEEEcCCChhHHHHHHHHHhc-ccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc---CCccceEEeCCHHHHhCC
Q 019990 6 LRVLVTGAAGQIGYALVPMIARG-IMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF---PLLKGVVATTDVVEACKD 81 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~-~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~---~~~~~v~~~~~~~~a~~~ 81 (332)
|||+|+||.++=+..++..|+.. ..++ ..+|+|+|+++ ++++. +..+..... ...-.+..++|..+|++|
T Consensus 1 ~KI~iIGaGS~~tp~li~~l~~~~~~l~---~~ei~L~DId~--~rl~~-v~~l~~~~~~~~g~~~~v~~Ttdr~eAl~g 74 (437)
T cd05298 1 FKIVIAGGGSTYTPGIVKSLLDRKEDFP---LRELVLYDIDA--ERQEK-VAEAVKILFKENYPEIKFVYTTDPEEAFTD 74 (437)
T ss_pred CeEEEECCcHHHHHHHHHHHHhCcccCC---CCEEEEECCCH--HHHHH-HHHHHHHHHHhhCCCeEEEEECCHHHHhCC
Confidence 58999997333333444555443 1121 24999999975 34432 222221110 112357778899999999
Q ss_pred CcEEEEecCC------------CCCCCC---Ch---hH--HHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHH
Q 019990 82 VNIAVMVGGF------------PRKEGM---ER---KD--VMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALIL 141 (332)
Q Consensus 82 aDiVi~~ag~------------~~~~~~---~~---~~--~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~ 141 (332)
||+||.+.-+ |.+.|. +. .. ..-+|++.+.++++.++++| |++++|++|||++.+++.+
T Consensus 75 ADfVi~~irvGg~~~r~~De~Ip~kyGi~gqET~G~GG~~~alRtip~~~~i~~~i~~~~-pda~lin~tNP~~~vt~~~ 153 (437)
T cd05298 75 ADFVFAQIRVGGYAMREQDEKIPLKHGVVGQETCGPGGFAYGLRSIGPMIELIDDIEKYS-PDAWILNYSNPAAIVAEAL 153 (437)
T ss_pred CCEEEEEeeeCCchHHHHHHhHHHHcCcceecCccHHHHHHHHhhHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHH
Confidence 9999998522 112221 10 11 23578999999999999998 9999999999999999999
Q ss_pred HHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecCCCceeecccCcccccCCC-Ccchhhhcc----c
Q 019990 142 KEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKG-EKPVREAVA----D 216 (332)
Q Consensus 142 ~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg~~~v~~~s~~~v~~~~~-~~p~~~~~~----~ 216 (332)
++. +|..+++|.|.-. ..+...+|+.+|+++.++..- +.| -+++.++.+.+. . |+++...+. +
T Consensus 154 ~~~---~~~~kviGlC~~~-~~~~~~la~~lg~~~~~v~~~-~~G---lNH~~w~~~~~~----~~G~D~~p~l~e~~~~ 221 (437)
T cd05298 154 RRL---FPNARILNICDMP-IAIMDSMAAILGLDRKDLEPD-YFG---LNHFGWFTKIYD----KQGEDLLPKLREHVKE 221 (437)
T ss_pred HHH---CCCCCEEEECCcH-HHHHHHHHHHhCCCHHHceEE-EEe---ecchhhhhheEE----CCCCchHHHHHHHHhc
Confidence 885 6777899999874 456778999999999999865 467 233445555554 3 333221110 0
Q ss_pred --------------cccc---------------------------hhHHHHH-----------HHhhHHHH---HH---h
Q 019990 217 --------------DNWL---------------------------NTEFITT-----------VQQRGAAI---IK---A 238 (332)
Q Consensus 217 --------------~~~~---------------------------~~~~~~~-----------v~~~~~~i---~~---~ 238 (332)
..|. .++..+. +.+...+. .+ .
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~~y~~yy~~~~~~~~~~~~~~~~~~e~~~~~~~~l~~~~~~~~~ 301 (437)
T cd05298 222 NGYLPPDSDEEHRDPSWNDTFANAKDMMADFPDYLPNTYLQYYLYPDYMVEHSNPNYTRANEVMDGREKRVFEECRKIIE 301 (437)
T ss_pred cCCCcccccccccccCchHHHHHHhhHHHhCCCcCCCchhhHhCChHHHHHHhccccccHHHHHHHHHHHHHHHHhhhhh
Confidence 0010 0000000 00011111 11 0
Q ss_pred cCC---cchHH--HHHHHHHHHHHHHcCCCCCcEEEEEEeecCCCC-CCCCeEEEEeEEEe-CCeEEEecCCCCCHHHHH
Q 019990 239 RKL---SSALS--AASSACDHIRDWVLGTPKGTWVSMGVYSDGSYG-IPEGLIYSFPVTCE-KGEWSIVKGLKVDEFSRA 311 (332)
Q Consensus 239 ~g~---~~~~~--~a~a~~~~i~~~~~~~~~~~i~~~~v~~~g~yg-~~~~~~~s~Pv~~~-~G~~~~~~~~~l~~~E~~ 311 (332)
.+. ....+ -|.++++++.+ |.+ |++.++++++..+|.|+ +|.++++++||+++ +|+..+.- -+|.+....
T Consensus 302 ~~~~~~~~~~~~~ya~~a~~ii~a-I~~-d~~~~~~vnv~n~G~i~nL~~d~~vevP~~v~~~Gi~pi~v-g~lP~~~~~ 378 (437)
T cd05298 302 TGTAEGSTFHVDVHGEYIVDLAAS-IAY-NTKERFLVIVENNGAIPNLPDDAMVEVPAYIGSNGPEPLVV-GKIPTFYKG 378 (437)
T ss_pred cCChhhhhhhccchHHHHHHHHHH-HHc-CCCeEEEEEeecCCccCCCCCCcEEEEEEEEeCCCceeccc-CCCCHHHHH
Confidence 010 01111 23455555555 554 56899999999999996 67899999999999 99888753 478888777
Q ss_pred HHHHHHHHHHHHHHHH
Q 019990 312 KMDATAEELAEEKTLA 327 (332)
Q Consensus 312 ~l~~s~~~i~~~~~~~ 327 (332)
+++.-...-+-.++++
T Consensus 379 l~~~~~~~e~l~veAa 394 (437)
T cd05298 379 LMEQQVAYEKLLVEAY 394 (437)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6655444444444444
No 39
>cd05197 GH4_glycoside_hydrolases Glycoside Hydrases Family 4. Glycoside hydrolases cleave glycosidic bonds to release smaller sugars from oligo- or polysaccharides. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by GH4 glycoside hydrolases. Other organisms (such as archaea and Thermotoga maritima) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. GH4 family members include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. They require two cofactors, NAD+ and a divalent metal (Mn2+, Ni2+, Mg2+), for activity. Some also require reducing conditions. GH4 glycoside hydrolases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families in
Probab=99.87 E-value=1.3e-19 Score=172.59 Aligned_cols=186 Identities=18% Similarity=0.171 Sum_probs=133.3
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcc-cCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc-CC--ccceEEeCCHHHHhCC
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGI-MLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF-PL--LKGVVATTDVVEACKD 81 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~-~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~-~~--~~~v~~~~~~~~a~~~ 81 (332)
+||+|+||.++=.-.++..|+... -+. ..+|.|+|+++ ++++- +..+..... .. ...+..++|..+|++|
T Consensus 1 ~KI~iIGgGS~~tp~li~~l~~~~~~l~---~~ei~L~Did~--~Rl~~-v~~l~~~~~~~~g~~~~v~~ttD~~~Al~g 74 (425)
T cd05197 1 VKIAIIGGGSSFTPELVSGLLKTPEELP---ISEVTLYDIDE--ERLDI-ILTIAKRYVEEVGADIKFEKTMDLEDAIID 74 (425)
T ss_pred CEEEEECCchHhHHHHHHHHHcChhhCC---CCEEEEEcCCH--HHHHH-HHHHHHHHHHhhCCCeEEEEeCCHHHHhCC
Confidence 589999973332333444554332 111 24999999975 33332 222211100 11 2357778999999999
Q ss_pred CcEEEEecCC------------CCCCCCCh--------hHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHH
Q 019990 82 VNIAVMVGGF------------PRKEGMER--------KDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALIL 141 (332)
Q Consensus 82 aDiVi~~ag~------------~~~~~~~~--------~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~ 141 (332)
||+||.+.-+ |.+.|.-. .-..-+|+++++++++.++++| |++++|++|||++.+++.+
T Consensus 75 ADfVi~~irvGg~~~r~~De~Iplk~G~~gqeT~G~GG~~~alrni~ii~~i~~~i~~~~-P~a~lin~TNP~di~t~a~ 153 (425)
T cd05197 75 ADFVINQFRVGGLTYREKDEQIPLKYGVIGQETVGPGGTFSGLRQIPYVLDIARKXEKLS-PDAWYLNFTNPAGEVTEAV 153 (425)
T ss_pred CCEEEEeeecCChHHHHHHHhHHHHcCcccccccCcchhhhhhhhHHHHHHHHHHHHHhC-CCcEEEecCChHHHHHHHH
Confidence 9999998522 11221100 1123468999999999999998 9999999999999999999
Q ss_pred HHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEe-cCCCceeecccCcccccCCCCcchh
Q 019990 142 KEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWG-NHSSTQYPDVNHATVTTSKGEKPVR 211 (332)
Q Consensus 142 ~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G-~hg~~~v~~~s~~~v~~~~~~~p~~ 211 (332)
++. .|+.+++|.|.. +.|+++.+|+.+|+++++|+.+ ++| +|| ++||++++ +|+|+.
T Consensus 154 ~~~---~p~~rviG~c~~-~~r~~~~ia~~lgv~~~~v~~~-v~GlnHg----~~~s~~~~----~G~~l~ 211 (425)
T cd05197 154 RRY---VPPEKAVGLCNV-PIGVMEIVAKLLGESEEKVDWQ-YAGLNHG----IWLNRVRY----NGGDVT 211 (425)
T ss_pred HHh---CCCCcEEEECCC-HHHHHHHHHHHhCCCHHHeEEE-EEeccCe----EeeEeEEE----CCeecH
Confidence 986 366788888877 9999999999999999999987 589 998 89999998 776665
No 40
>PRK15076 alpha-galactosidase; Provisional
Probab=99.86 E-value=5.8e-19 Score=168.69 Aligned_cols=295 Identities=15% Similarity=0.127 Sum_probs=185.3
Q ss_pred CcEEEEEcCCChhHHHHHH--HHH-hcccCCCCCCeEEEEEecccchhhhh-hhHhhhhhhccC--CccceEEeCCHHHH
Q 019990 5 PLRVLVTGAAGQIGYALVP--MIA-RGIMLGPDQPVILHMLDIEPAAEALN-GVKMELIDAAFP--LLKGVVATTDVVEA 78 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~--~L~-~~~~~~~~~~~~i~l~D~~~~~~~~~-~~~~dl~~~~~~--~~~~v~~~~~~~~a 78 (332)
|+||+|+| +|.+|++.+. .++ ..++.+ .+|+|+|+++ +++. +... +.+.... ....++.++|.+++
T Consensus 1 ~~KIaIIG-aGsvg~~~~~~~~i~~~~~l~~----~evvLvDid~--er~~~~~~l-~~~~~~~~~~~~~i~~ttD~~ea 72 (431)
T PRK15076 1 MPKITFIG-AGSTVFTKNLLGDILSVPALRD----AEIALMDIDP--ERLEESEIV-ARKLAESLGASAKITATTDRREA 72 (431)
T ss_pred CcEEEEEC-CCHHHhHHHHHHHHhhCccCCC----CEEEEECCCH--HHHHHHHHH-HHHHHHhcCCCeEEEEECCHHHH
Confidence 46999999 5999988776 555 233322 3899999965 3444 2222 3332211 12456767888899
Q ss_pred hCCCcEEEEecCCC-CCCC--------------CChhHH--------HhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChh
Q 019990 79 CKDVNIAVMVGGFP-RKEG--------------MERKDV--------MSKNVSIYKAQASALEKHAAPNCKVLVVANPAN 135 (332)
Q Consensus 79 ~~~aDiVi~~ag~~-~~~~--------------~~~~~~--------~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~ 135 (332)
+++||+||.+++++ ++++ ++|.+. ..+|++.++++++.++++| |++++|++|||++
T Consensus 73 l~dADfVv~ti~vg~~~~~~~~De~Iplk~G~~~~r~et~G~GG~~~~~r~i~~i~~i~~~i~~~~-p~a~iin~tNP~d 151 (431)
T PRK15076 73 LQGADYVINAIQVGGYEPCTVTDFEIPKKYGLRQTIGDTLGIGGIMRALRTIPVLLDICEDMEEVC-PDALLLNYVNPMA 151 (431)
T ss_pred hCCCCEEeEeeeeCCcchhhhhhhhhHHHcCCeeecccCcCccchhhhhhhHHHHHHHHHHHHHHC-CCeEEEEcCChHH
Confidence 99999999999875 3333 233344 6789999999999999998 9999999999999
Q ss_pred hHHHHHHHHCCCCCCCcEEEee--cccHHHHHHHHHHHcCCCCCCeeeeEEEe-cCCCceeecccCcccccCCCCcchhh
Q 019990 136 TNALILKEFAPSIPAKNITCLT--RLDHNRAMGQISERLKVHVSDVKNVIIWG-NHSSTQYPDVNHATVTTSKGEKPVRE 212 (332)
Q Consensus 136 ~~~~~~~~~~~~~~~~~i~~~t--~l~~~r~~~~~a~~~~v~~~~v~~~~V~G-~hg~~~v~~~s~~~v~~~~~~~p~~~ 212 (332)
.+++.+++ +|+.|++|.| .+++. +.+|+.+|+++++|+.. ++| +| +.|+.+.+. .|+++..
T Consensus 152 ivt~~~~~----~~~~rviG~c~~~~~~~---~~ia~~l~v~~~~v~~~-~~GlNH----~~W~~~~~~----~G~D~~p 215 (431)
T PRK15076 152 MNTWAMNR----YPGIKTVGLCHSVQGTA---EQLARDLGVPPEELRYR-CAGINH----MAWYLELER----KGEDLYP 215 (431)
T ss_pred HHHHHHhc----CCCCCEEEECCCHHHHH---HHHHHHhCCCHHHeEEE-EEeecc----hhhheeeeE----CCcchHH
Confidence 99998863 5667877776 44443 77999999999999976 478 44 445555554 2222211
Q ss_pred hc--------------------------cc-------c--ccc----hhHHHHHH--------------HhhHHHHH-Hh
Q 019990 213 AV--------------------------AD-------D--NWL----NTEFITTV--------------QQRGAAII-KA 238 (332)
Q Consensus 213 ~~--------------------------~~-------~--~~~----~~~~~~~v--------------~~~~~~i~-~~ 238 (332)
.+ .. + .|- .++..+.. .....+.+ +.
T Consensus 216 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~y~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (431)
T PRK15076 216 ELRAAAAEGQTRCQDKVRYEMLKRFGYFVTESSEHFAEYVPWFIKPGRPDLIERFNIPLDEYPRRCEEQIANWEKEREEL 295 (431)
T ss_pred HHHHHHhccCchhcccccHHHHHHhCCCcccchhhhhhhhcccCcCCCHHHHHHhhcccchhhhhHHHHhhhHHHHHHHh
Confidence 00 00 0 111 11111111 01111111 11
Q ss_pred cCCcchHH--HHHHHHHHHHHHHcCCCCCcEEEEEEeecCCC-CCCCCeEEEEeEEEe-CCeEEEecCCCCCHHHHHHHH
Q 019990 239 RKLSSALS--AASSACDHIRDWVLGTPKGTWVSMGVYSDGSY-GIPEGLIYSFPVTCE-KGEWSIVKGLKVDEFSRAKMD 314 (332)
Q Consensus 239 ~g~~~~~~--~a~a~~~~i~~~~~~~~~~~i~~~~v~~~g~y-g~~~~~~~s~Pv~~~-~G~~~~~~~~~l~~~E~~~l~ 314 (332)
.+..++.. .+-.++.++.+ |.+ |++.++.+.|.-+|.- ++|.+.++=+||.++ +|+.-+.- -+|.+..+.+++
T Consensus 296 ~~~~~~~~~~~~e~a~~ii~a-i~~-~~~~~~~vnv~N~G~I~~Lp~d~vVEvp~~v~~~G~~P~~~-g~lP~~~~~l~~ 372 (431)
T PRK15076 296 ANAERIEIKRSREYASTIIEA-IET-GEPSVIYGNVRNNGLIDNLPQGCCVEVPCLVDRNGIQPTKV-GDLPPQLAALNR 372 (431)
T ss_pred hCCCccccccchHHHHHHHHH-Hhc-CCceEEEEECCCCCcCCCCCCCCEEEEeEEEcCCcceeeec-CCCCHHHHHHHH
Confidence 22211110 12233444444 554 4578888888777753 678999999999999 88877653 478888777665
Q ss_pred HHHHHHHHHHHHH
Q 019990 315 ATAEELAEEKTLA 327 (332)
Q Consensus 315 ~s~~~i~~~~~~~ 327 (332)
.-...-+-.++++
T Consensus 373 ~~~~~e~l~veAa 385 (431)
T PRK15076 373 TNINVQELTVEAA 385 (431)
T ss_pred HHHHHHHHHHHHH
Confidence 5444433344444
No 41
>cd05296 GH4_P_beta_glucosidase Glycoside Hydrolases Family 4; Phospho-beta-glucosidase. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein
Probab=99.84 E-value=5.6e-18 Score=161.10 Aligned_cols=297 Identities=17% Similarity=0.146 Sum_probs=180.8
Q ss_pred cEEEEEcCCChhHHHHHHHHHhc-ccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCC--ccceEEeCCHHHHhCCC
Q 019990 6 LRVLVTGAAGQIGYALVPMIARG-IMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPL--LKGVVATTDVVEACKDV 82 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~-~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~--~~~v~~~~~~~~a~~~a 82 (332)
+||+|+||.++=...++..|+.. .-++ ..+|.|+|++. .+++.....-........ ...+..++|..+|++||
T Consensus 1 ~KI~iIGaGS~~tp~li~~l~~~~~~l~---~~ei~L~Did~-~~rl~~v~~~~~~~~~~~~~~~~v~~t~d~~~al~ga 76 (419)
T cd05296 1 MKLTIIGGGSSYTPELIEGLIRRYEELP---VTELVLVDIDE-EEKLEIVGALAKRMVKKAGLPIKVHLTTDRREALEGA 76 (419)
T ss_pred CEEEEECCchHhHHHHHHHHHhccccCC---CCEEEEecCCh-HHHHHHHHHHHHHHHHhhCCCeEEEEeCCHHHHhCCC
Confidence 58999997333222344555542 2111 24999999973 244432211111111111 23567788999999999
Q ss_pred cEEEEecCCCCCCCCChhH--------------------HHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHH
Q 019990 83 NIAVMVGGFPRKEGMERKD--------------------VMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILK 142 (332)
Q Consensus 83 DiVi~~ag~~~~~~~~~~~--------------------~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~ 142 (332)
|+||.++++...++..+++ ...+|+++++++++.++++| |+++++++|||++.+++.++
T Consensus 77 dfVi~~~~vg~~~~r~~de~i~~~~Gi~gqET~G~GG~~~a~rni~ii~~i~~~i~~~~-Pda~lin~TNP~~ivt~a~~ 155 (419)
T cd05296 77 DFVFTQIRVGGLEARALDERIPLKHGVIGQETTGAGGFAKALRTIPVILDIAEDVEELA-PDAWLINFTNPAGIVTEAVL 155 (419)
T ss_pred CEEEEEEeeCCcchhhhhhhhHHHcCCccccCCCcchHHHhhhhHHHHHHHHHHHHHHC-CCeEEEEecCHHHHHHHHHH
Confidence 9999998765544333322 24678999999999999998 99999999999999999998
Q ss_pred HHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEe-cCCCceeecccCcccccCCCCcchhhh-cc-----
Q 019990 143 EFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWG-NHSSTQYPDVNHATVTTSKGEKPVREA-VA----- 215 (332)
Q Consensus 143 ~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G-~hg~~~v~~~s~~~v~~~~~~~p~~~~-~~----- 215 (332)
+. + +.|++|.|.. +.|+++.+|+.+|+++++++.+ |+| +| +.++.+.+. .|+++..- +.
T Consensus 156 k~-~---~~rviGlc~~-~~r~~~~ia~~lg~~~~~v~~~-v~GlNH----~~w~~~~~~----~G~D~~p~l~~~~~~~ 221 (419)
T cd05296 156 RH-T---GDRVIGLCNV-PIGLQRRIAELLGVDPEDVFID-YAGLNH----LGWLRRVLL----DGEDVLPELLEDLAAL 221 (419)
T ss_pred Hh-c---cCCEEeeCCc-HHHHHHHHHHHhCCCHHHceEE-EEeccc----ceeeeeeeE----CCcccHHHHHHHhhhc
Confidence 86 3 5678888877 5899999999999999999986 589 77 344444444 33322210 00
Q ss_pred -----cccc--------------------chhHHHHH-----------HHhhHHHH---HH------------hcCCcch
Q 019990 216 -----DDNW--------------------LNTEFITT-----------VQQRGAAI---IK------------ARKLSSA 244 (332)
Q Consensus 216 -----~~~~--------------------~~~~~~~~-----------v~~~~~~i---~~------------~~g~~~~ 244 (332)
+..| ..++..+. +.+...++ .+ .++++ +
T Consensus 222 ~~~~~~~~~~~~~~~~~g~~p~~Yl~yy~~~~~~~~~~~~~~~~r~e~~~~~~~~l~~~~~~~~~~~~~~~~~~r~g~-~ 300 (419)
T cd05296 222 LSFEEGLLFGPELLRALGALPNEYLRYYYQTDEALEEILEAAGTRGEVVKEVEKELFELYKDPNLDEKPKELEKRGGA-G 300 (419)
T ss_pred cccccccchHHHHHHhcCCcccchHHHHCCcHHHHHHhhhhccchHHHHHHHHHHHHHHHhccccccChHhhHhhcCc-c
Confidence 0000 00111110 00001111 11 11111 0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEEEEeecCCC-CCCCCeEEEEeEEEe-CCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 019990 245 LSAASSACDHIRDWVLGTPKGTWVSMGVYSDGSY-GIPEGLIYSFPVTCE-KGEWSIVKGLKVDEFSRAKMDATAEELAE 322 (332)
Q Consensus 245 ~~~a~a~~~~i~~~~~~~~~~~i~~~~v~~~g~y-g~~~~~~~s~Pv~~~-~G~~~~~~~~~l~~~E~~~l~~s~~~i~~ 322 (332)
. +-..+.+|.+ |.+ +++.++-+.|.-+|.- ++|.+.++=+||.++ +|+.-+-- -+|.+....+++.-...-+-
T Consensus 301 y--~e~a~~ii~a-i~~-~~~~~~~vNv~N~G~I~~Lp~d~vVEvp~~v~~~G~~P~~v-g~lP~~~~~l~~~~~~~e~l 375 (419)
T cd05296 301 Y--SEAALALISA-IYN-DKGDIHVVNVRNNGAIPGLPDDAVVEVPCVVDADGAHPLPV-GPLPPAILGLIQQVKAYERL 375 (419)
T ss_pred h--HHHHHHHHHH-Hhc-CCCcEEEEECCCCCCCCCCCCCCEEEEeEEEcCCCceeccC-CCCCHHHHHHHHHHHHHHHH
Confidence 1 1223344544 554 4567777888777753 578999999999999 88766532 36888876665544333333
Q ss_pred HHHHH
Q 019990 323 EKTLA 327 (332)
Q Consensus 323 ~~~~~ 327 (332)
.++++
T Consensus 376 ~veAa 380 (419)
T cd05296 376 TIEAA 380 (419)
T ss_pred HHHHH
Confidence 44444
No 42
>cd05297 GH4_alpha_glucosidase_galactosidase Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases. linked to 3D####ucture
Probab=99.78 E-value=2.9e-16 Score=150.37 Aligned_cols=169 Identities=19% Similarity=0.198 Sum_probs=126.0
Q ss_pred cEEEEEcCCChhHHHHHH--HHHhc-ccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc--CCccceEEeCCHHHHhC
Q 019990 6 LRVLVTGAAGQIGYALVP--MIARG-IMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF--PLLKGVVATTDVVEACK 80 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~--~L~~~-~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~--~~~~~v~~~~~~~~a~~ 80 (332)
+||+|+| +|.+|++++. .++.. ...+ .+|+|+|+++ +++.....++.+... ....++..++|+.++++
T Consensus 1 ~KIaIIG-aGs~G~a~a~~~~i~~~~~~~g----~eV~L~Did~--e~l~~~~~~~~~~~~~~~~~~~I~~ttD~~eal~ 73 (423)
T cd05297 1 IKIAFIG-AGSVVFTKNLVGDLLKTPELSG----STIALMDIDE--ERLETVEILAKKIVEELGAPLKIEATTDRREALD 73 (423)
T ss_pred CeEEEEC-CChHHhHHHHHHHHhcCCCCCC----CEEEEECCCH--HHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHHhc
Confidence 4899999 6999998776 45432 3322 3899999964 455555555544321 12246777888899999
Q ss_pred CCcEEEEecCCCCCCCCCh----------------------hHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHH
Q 019990 81 DVNIAVMVGGFPRKEGMER----------------------KDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNA 138 (332)
Q Consensus 81 ~aDiVi~~ag~~~~~~~~~----------------------~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~ 138 (332)
+||+||.+++.....+..+ ......|+..+.++++.+++++ |+++++++|||++.++
T Consensus 74 ~AD~Vi~ai~~~~~~~~~~de~i~~K~g~~~~~~~t~g~ggi~~~~~s~~~i~~ia~~i~~~~-p~a~~i~~tNPv~i~t 152 (423)
T cd05297 74 GADFVINTIQVGGHEYTETDFEIPEKYGYYQTVGDTSGPGGIFRALRTIPVLLDIARDIEELC-PDAWLLNYANPMAELT 152 (423)
T ss_pred CCCEEEEeeEecCccchhhhhhhHHHcCeeeeccCCCcHHHHHHHHhhHHHHHHHHHHHHHHC-CCCEEEEcCChHHHHH
Confidence 9999999987543332222 1234567889999999999998 7999999999999999
Q ss_pred HHHHHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEe-cC
Q 019990 139 LILKEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWG-NH 188 (332)
Q Consensus 139 ~~~~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G-~h 188 (332)
+.+++. ++ .+++|.|.. +.++++.+|+.+|+++++|+.. ++| +|
T Consensus 153 ~~~~k~-~~---~rviG~c~~-~~~~~~~~a~~l~~~~~~v~~~-~~GlNH 197 (423)
T cd05297 153 WALNRY-TP---IKTVGLCHG-VQGTAEQLAKLLGEPPEEVDYQ-VAGINH 197 (423)
T ss_pred HHHHHh-CC---CCEEEECCc-HHHHHHHHHHHhCCCHHHeEEE-EEeecc
Confidence 999886 33 567677755 8899999999999999999987 478 44
No 43
>COG1486 CelF Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=99.68 E-value=2.5e-14 Score=133.99 Aligned_cols=298 Identities=18% Similarity=0.216 Sum_probs=178.7
Q ss_pred CCcEEEEEcCCChhHHHHH-H-HHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc-CC--ccceEEeCCHHHH
Q 019990 4 NPLRVLVTGAAGQIGYALV-P-MIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF-PL--LKGVVATTDVVEA 78 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~-~-~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~-~~--~~~v~~~~~~~~a 78 (332)
++.||+|+|| |+++.... . .|.+..-++ ..++.|+|++. ++++ ....+.+-.. .. ...+..++|.++|
T Consensus 2 ~~~KI~iIGg-GSt~tp~~v~g~l~~~e~l~---~~el~L~Did~--~r~~-~i~~~~~~~v~~~g~~~kv~~ttd~~eA 74 (442)
T COG1486 2 KKFKIVIIGG-GSTYTPKLLLGDLARTEELP---VRELALYDIDE--ERLK-IIAILAKKLVEEAGAPVKVEATTDRREA 74 (442)
T ss_pred CcceEEEECC-CccccHHHHHHHHhcCccCC---cceEEEEeCCH--HHHH-HHHHHHHHHHHhhCCCeEEEEecCHHHH
Confidence 4678999995 66554432 1 222222222 23999999975 3333 2222221100 01 1356678899999
Q ss_pred hCCCcEEEEecCC------------CCCCCCChh------HHH--hhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHH
Q 019990 79 CKDVNIAVMVGGF------------PRKEGMERK------DVM--SKNVSIYKAQASALEKHAAPNCKVLVVANPANTNA 138 (332)
Q Consensus 79 ~~~aDiVi~~ag~------------~~~~~~~~~------~~~--~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~ 138 (332)
++|||+|+.+.-+ |.+.|.-+. .++ -++++.+.++++.++++| |+++++++|||+...|
T Consensus 75 l~gAdfVi~~~rvG~l~~r~~De~IplkyG~~gqET~G~GGi~~glRtIpvildi~~~m~~~~-P~Aw~lNytNP~~~vT 153 (442)
T COG1486 75 LEGADFVITQIRVGGLEAREKDERIPLKHGLYGQETNGPGGIFYGLRTIPVILDIAKDMEKVC-PNAWMLNYTNPAAIVT 153 (442)
T ss_pred hcCCCEEEEEEeeCCcccchhhhccchhhCccccccccccHHHhhcccchHHHHHHHHHHHhC-CCceEEeccChHHHHH
Confidence 9999999997521 222221111 122 367899999999999998 9999999999999999
Q ss_pred HHHHHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCC-CCeeeeEEEe-cCCCceeecccCcccccCCCCcchhhh---
Q 019990 139 LILKEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHV-SDVKNVIIWG-NHSSTQYPDVNHATVTTSKGEKPVREA--- 213 (332)
Q Consensus 139 ~~~~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~-~~v~~~~V~G-~hg~~~v~~~s~~~v~~~~~~~p~~~~--- 213 (332)
..+.++ +|.-+++|.|+. ..-....+|+.+++++ .+++. -++| +| +.+|.+++. +|+++..-
T Consensus 154 eAv~r~---~~~~K~VGlCh~-~~g~~~~lAe~L~~~~~~~l~~-~~aGlNH----~~w~~~~~~----~G~d~~p~l~~ 220 (442)
T COG1486 154 EAVRRL---YPKIKIVGLCHG-PIGIAMELAEVLGLEPREDLRY-RVAGLNH----MVWILRVRD----DGEDLYPELLE 220 (442)
T ss_pred HHHHHh---CCCCcEEeeCCc-hHHHHHHHHHHhCCCchhceeE-EEeechh----hhhhhHhhh----cCccchHHHHH
Confidence 988886 453378899986 3455778999999975 99996 4688 44 334444443 11111100
Q ss_pred -----------------------------------------------ccccc-----c-c-hhHHHHHHHhhHHHHHH--
Q 019990 214 -----------------------------------------------VADDN-----W-L-NTEFITTVQQRGAAIIK-- 237 (332)
Q Consensus 214 -----------------------------------------------~~~~~-----~-~-~~~~~~~v~~~~~~i~~-- 237 (332)
...+. | . .+++.++ .+.-++..+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ra~ev~~r-e~~~~~~~~~~ 299 (442)
T COG1486 221 ALEEGGSPSEPENKNIQSPVWIDMFLKYGYPVLPSSYHRYYYYPYDMKEKKPDEIEKFGTRANEVMKR-EKELFELYKKP 299 (442)
T ss_pred HHhccccCCccccccccCcchHHHHHHhCcCcccCcchhhheehHhhhhccchhhhhcCCCHHHHHHH-HHHHHHHHhhh
Confidence 00000 1 0 0111110 000011111
Q ss_pred ----------hcCCcchHHHHHHHHHHHHHHHcCCCCCcEEEEEEeecCC-CCCCCCeEEEEeEEEe-CCeEEEecCCCC
Q 019990 238 ----------ARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDGS-YGIPEGLIYSFPVTCE-KGEWSIVKGLKV 305 (332)
Q Consensus 238 ----------~~g~~~~~~~a~a~~~~i~~~~~~~~~~~i~~~~v~~~g~-yg~~~~~~~s~Pv~~~-~G~~~~~~~~~l 305 (332)
.++.+--.+ +-..+.++.+ |.+ +++.++.+.|.-+|. -++|.+..+=+||+++ +|+.-... .+|
T Consensus 300 ~~~~~p~~~~~~~~~~~~~-~e~a~~ii~A-i~~-~~~~~~~vNv~N~G~I~nlp~D~vVEvpc~Vd~~Gi~P~~~-g~l 375 (442)
T COG1486 300 ELKEKPEELEKRIGAGKYS-SEYASNIINA-IEN-NKPSRIYVNVRNNGAITNLPDDAVVEVPCLVDRNGIHPLAV-GDL 375 (442)
T ss_pred hhhcCchhhhhcCCccccc-HHHHHHHHHH-Hhc-CCceEEEEEcCCCccccCCCCCeEEEeeEEecCCCCccccc-CCC
Confidence 111110012 2333344544 554 467888888888886 4678999999999999 99888764 799
Q ss_pred CHHHHHHHHHHHHHHHHHHHHH
Q 019990 306 DEFSRAKMDATAEELAEEKTLA 327 (332)
Q Consensus 306 ~~~E~~~l~~s~~~i~~~~~~~ 327 (332)
.+.-+..++.....-+-.++++
T Consensus 376 P~~~~~l~~~~i~~e~l~veA~ 397 (442)
T COG1486 376 PEFVKGLMHTNINVEELTVEAA 397 (442)
T ss_pred CHHHHHHHHHHHHHHHHHHHHH
Confidence 9998887776655555455544
No 44
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.61 E-value=2.2e-15 Score=133.33 Aligned_cols=166 Identities=17% Similarity=0.137 Sum_probs=120.2
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc-cCCccceEEeCCHHHHhC--CC
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA-FPLLKGVVATTDVVEACK--DV 82 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~-~~~~~~v~~~~~~~~a~~--~a 82 (332)
|+|+||||+|+||||.+..|++.|+ +++++|+.. .+...-+.... ..+.+|+.+..-+.+.++ ..
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~-------~vvV~DNL~-----~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~i 68 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGH-------EVVVLDNLS-----NGHKIALLKLQFKFYEGDLLDRALLTAVFEENKI 68 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCC-------eEEEEecCC-----CCCHHHhhhccCceEEeccccHHHHHHHHHhcCC
Confidence 5799999999999999999999886 899999743 23322222211 123466766655666554 68
Q ss_pred cEEEEecCCCCCCC--CChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhh----H-HHHHHHHCCCCCCCcEEE
Q 019990 83 NIAVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANT----N-ALILKEFAPSIPAKNITC 155 (332)
Q Consensus 83 DiVi~~ag~~~~~~--~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~----~-~~~~~~~~~~~~~~~i~~ 155 (332)
|.|||.||...-.+ .....++..|+..+..++++|++++ .+ ++|+.| .+.+ . .++ .|. ....|.++||
T Consensus 69 daViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~g-v~-~~vFSS-tAavYG~p~~~PI-~E~-~~~~p~NPYG 143 (329)
T COG1087 69 DAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG-VK-KFIFSS-TAAVYGEPTTSPI-SET-SPLAPINPYG 143 (329)
T ss_pred CEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhC-CC-EEEEec-chhhcCCCCCccc-CCC-CCCCCCCcch
Confidence 99999998643221 2346789999999999999999997 33 444444 3211 1 122 221 3455777999
Q ss_pred eecccHHHHHHHHHHHcCCCCCCeeeeEEEecC
Q 019990 156 LTRLDHNRAMGQISERLKVHVSDVKNVIIWGNH 188 (332)
Q Consensus 156 ~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~h 188 (332)
-||+..+++.+-+++..+.+...+|.|++.|-|
T Consensus 144 ~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~ 176 (329)
T COG1087 144 RSKLMSEEILRDAAKANPFKVVILRYFNVAGAC 176 (329)
T ss_pred hHHHHHHHHHHHHHHhCCCcEEEEEecccccCC
Confidence 999999999999999999999999999999965
No 45
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=99.59 E-value=8.1e-15 Score=132.78 Aligned_cols=173 Identities=16% Similarity=0.105 Sum_probs=121.0
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc---cCCccceEEeCCHHHHhC
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA---FPLLKGVVATTDVVEACK 80 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~---~~~~~~v~~~~~~~~a~~ 80 (332)
.+++|+||||+||||++++..|++.|+ +|+-.-+++.+++-.....+|.... ..+..|+.....+.++++
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY-------~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~ 77 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGY-------TVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID 77 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCC-------EEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh
Confidence 568999999999999999999999998 6665544432221112333443221 122468888888999999
Q ss_pred CCcEEEEecCCCCCCC-CChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHH---------HHHHCCCCCC
Q 019990 81 DVNIAVMVGGFPRKEG-MERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALI---------LKEFAPSIPA 150 (332)
Q Consensus 81 ~aDiVi~~ag~~~~~~-~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~---------~~~~~~~~~~ 150 (332)
+||.|||+|....... .++.+++..+++++.+++++|+++. .++-+|+|++...+.+- +-+ +.+..
T Consensus 78 gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~--sVkrvV~TSS~aAv~~~~~~~~~~~vvdE--~~wsd 153 (327)
T KOG1502|consen 78 GCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTK--SVKRVVYTSSTAAVRYNGPNIGENSVVDE--ESWSD 153 (327)
T ss_pred CCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccC--CcceEEEeccHHHhccCCcCCCCCccccc--ccCCc
Confidence 9999999998643322 2355789999999999999999984 67666666654322210 000 01111
Q ss_pred -------CcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEec
Q 019990 151 -------KNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGN 187 (332)
Q Consensus 151 -------~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~ 187 (332)
+.-|..++.-+++....+|+.-+++...+-+..|+|+
T Consensus 154 ~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP 197 (327)
T KOG1502|consen 154 LDFCRCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGP 197 (327)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECC
Confidence 1136678888999999999999999888888888887
No 46
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.51 E-value=4.2e-14 Score=132.73 Aligned_cols=173 Identities=16% Similarity=0.107 Sum_probs=115.3
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhh----hh---cc-CCccceEEeCCH
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELI----DA---AF-PLLKGVVATTDV 75 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~----~~---~~-~~~~~v~~~~~~ 75 (332)
.++||+||||+||||++|+..|++.+. +|+.+|+.... ......++. .. .. ....|+.....+
T Consensus 14 ~~~~vlVtGatGfiG~~lv~~L~~~g~-------~V~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l 84 (348)
T PRK15181 14 APKRWLITGVAGFIGSGLLEELLFLNQ-------TVIGLDNFSTG--YQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDC 84 (348)
T ss_pred cCCEEEEECCccHHHHHHHHHHHHCCC-------EEEEEeCCCCc--chhhhhhhhhccccccCCceEEEEccCCCHHHH
Confidence 357999999999999999999998875 89999874311 000000110 00 00 112355444455
Q ss_pred HHHhCCCcEEEEecCCCCCC--CCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHH----HHHHHCCCCC
Q 019990 76 VEACKDVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNAL----ILKEFAPSIP 149 (332)
Q Consensus 76 ~~a~~~aDiVi~~ag~~~~~--~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~----~~~~~~~~~~ 149 (332)
.+.++++|+|||+|+....+ ........+.|+.++.++++++++.+ .. ++|++|+. .+... ...+. ....
T Consensus 85 ~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~-~~v~~SS~-~vyg~~~~~~~~e~-~~~~ 160 (348)
T PRK15181 85 QKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH-VS-SFTYAASS-STYGDHPDLPKIEE-RIGR 160 (348)
T ss_pred HHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CC-eEEEeech-HhhCCCCCCCCCCC-CCCC
Confidence 66688999999999864321 12234567899999999999999874 22 66766642 11000 00111 1223
Q ss_pred CCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecCC
Q 019990 150 AKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHS 189 (332)
Q Consensus 150 ~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg 189 (332)
|...|+.+|+..+++...+++..+++...+|.++|||++.
T Consensus 161 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~ 200 (348)
T PRK15181 161 PLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQ 200 (348)
T ss_pred CCChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCC
Confidence 4457999999999998888888999999999999999853
No 47
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.49 E-value=3.2e-14 Score=129.38 Aligned_cols=178 Identities=16% Similarity=0.197 Sum_probs=115.5
Q ss_pred EEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc--CCccceEEeCCHHHHhCCCcEEE
Q 019990 9 LVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF--PLLKGVVATTDVVEACKDVNIAV 86 (332)
Q Consensus 9 ~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~--~~~~~v~~~~~~~~a~~~aDiVi 86 (332)
+||||+||+|++++..|++.+.. .+|+.+|+....... .++..... ....|++...++.++++++|+||
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~-----~~Vr~~d~~~~~~~~----~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~ 71 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYI-----YEVRVLDRSPPPKFL----KDLQKSGVKEYIQGDITDPESLEEALEGVDVVF 71 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCc-----eEEEEcccccccccc----hhhhcccceeEEEeccccHHHHHHHhcCCceEE
Confidence 58999999999999999998731 389999986532111 11222111 23467887888999999999999
Q ss_pred EecCCCCCCC-CChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHH------HHH-HHHCCCCCCC--cEEEe
Q 019990 87 MVGGFPRKEG-MERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNA------LIL-KEFAPSIPAK--NITCL 156 (332)
Q Consensus 87 ~~ag~~~~~~-~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~------~~~-~~~~~~~~~~--~i~~~ 156 (332)
|+|+.....+ .++..+.+.|+.++++++++|++.+ ++.+|+++.+.+.. ++. ......+++. ..|+-
T Consensus 72 H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~---VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~ 148 (280)
T PF01073_consen 72 HTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAG---VKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAE 148 (280)
T ss_pred EeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcC---CCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHH
Confidence 9998643333 4566789999999999999999874 33344443332211 111 0111223322 26788
Q ss_pred ecccHHHHHHHHHH---H--cCCCCCCeeeeEEEecCCCceeecccC
Q 019990 157 TRLDHNRAMGQISE---R--LKVHVSDVKNVIIWGNHSSTQYPDVNH 198 (332)
Q Consensus 157 t~l~~~r~~~~~a~---~--~~v~~~~v~~~~V~G~hg~~~v~~~s~ 198 (332)
||..++++...... . -.+....+|+..|||+.....+|.+.+
T Consensus 149 SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~ 195 (280)
T PF01073_consen 149 SKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVK 195 (280)
T ss_pred HHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhH
Confidence 88888877654333 1 236667789999999855555554443
No 48
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=99.48 E-value=2.9e-14 Score=124.72 Aligned_cols=190 Identities=14% Similarity=0.051 Sum_probs=128.7
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCC
Q 019990 3 KNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDV 82 (332)
Q Consensus 3 ~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (332)
.+++||+||||+|||||||+..|+..++ +|..+|... .+.+..+.+....-..++....-....+..+
T Consensus 25 ~~~lrI~itGgaGFIgSHLvdkLm~egh-------~VIa~Dn~f-----tg~k~n~~~~~~~~~fel~~hdv~~pl~~ev 92 (350)
T KOG1429|consen 25 SQNLRILITGGAGFIGSHLVDKLMTEGH-------EVIALDNYF-----TGRKENLEHWIGHPNFELIRHDVVEPLLKEV 92 (350)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHhcCC-------eEEEEeccc-----ccchhhcchhccCcceeEEEeechhHHHHHh
Confidence 3578999999999999999999998875 899999743 2333444443221122333333344567899
Q ss_pred cEEEEecCCCCCCC--CChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCCh---hhHH-H---HHHHHCCCCCCCcE
Q 019990 83 NIAVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPA---NTNA-L---ILKEFAPSIPAKNI 153 (332)
Q Consensus 83 DiVi~~ag~~~~~~--~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~---~~~~-~---~~~~~~~~~~~~~i 153 (332)
|-|+|+|.....++ .+....+..|.-++.+++..+++.+ ++++.+|... +... + ..|-....+.++..
T Consensus 93 D~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~---aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~c 169 (350)
T KOG1429|consen 93 DQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG---ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSC 169 (350)
T ss_pred hhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC---ceEEEeecccccCCcccCCCccccccccCcCCchhh
Confidence 99999997643332 2334456778888889888888874 5777777421 1000 0 00111122444556
Q ss_pred EEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecCC----CceeecccCcccccCCCCcchh
Q 019990 154 TCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHS----STQYPDVNHATVTTSKGEKPVR 211 (332)
Q Consensus 154 ~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg----~~~v~~~s~~~v~~~~~~~p~~ 211 (332)
|.-.+..++++++.+.+..|+.....|.++.||+.+ ...+..|+.+.+ .+.|++
T Consensus 170 ydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~l----r~eplt 227 (350)
T KOG1429|consen 170 YDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQAL----RGEPLT 227 (350)
T ss_pred hhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHh----cCCCeE
Confidence 777899999999999999999999999999999865 456666666666 555554
No 49
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.48 E-value=2.6e-14 Score=128.35 Aligned_cols=177 Identities=19% Similarity=0.222 Sum_probs=115.6
Q ss_pred EEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhh----hhc-----cCCccceEEeCCHHHH
Q 019990 8 VLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELI----DAA-----FPLLKGVVATTDVVEA 78 (332)
Q Consensus 8 I~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~----~~~-----~~~~~~v~~~~~~~~a 78 (332)
|+||||+|+||+.|+.+|++.+. .+|+++|++++ .+.....++. +.. .+...|+++...+.++
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p------~~lil~d~~E~--~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~ 72 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGP------KKLILFDRDEN--KLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRI 72 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-------SEEEEEES-HH--HHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHH
T ss_pred CEEEccccHHHHHHHHHHHhcCC------CeEEEeCCChh--HHHHHHHHHhhcccccCcccccCceeecccCHHHHHHH
Confidence 79999999999999999998764 38999999753 3444444442 111 1235677777677788
Q ss_pred hC--CCcEEEEecCCCCCC--CCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCcEE
Q 019990 79 CK--DVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNIT 154 (332)
Q Consensus 79 ~~--~aDiVi~~ag~~~~~--~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~i~ 154 (332)
++ +.|+|||+|+..+-+ +....+.++.|+-+++++++++.+++ .+ ++|.+|. | ..-+|.+++
T Consensus 73 ~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~-v~-~~v~IST--D----------KAv~Ptnvm 138 (293)
T PF02719_consen 73 FEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHG-VE-RFVFIST--D----------KAVNPTNVM 138 (293)
T ss_dssp TT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT--S-EEEEEEE--C----------GCSS--SHH
T ss_pred HhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcC-CC-EEEEccc--c----------ccCCCCcHH
Confidence 88 899999999874322 23345678999999999999999986 44 4555552 1 112344455
Q ss_pred EeecccHHHHHHHHHHHc---CCCCCCeeeeEEEecCCCceeecccCcccccCCCCcchh
Q 019990 155 CLTRLDHNRAMGQISERL---KVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVR 211 (332)
Q Consensus 155 ~~t~l~~~r~~~~~a~~~---~v~~~~v~~~~V~G~hg~~~v~~~s~~~v~~~~~~~p~~ 211 (332)
|.||.-++++....+... +.....||.-||+|.. ++.+|.|.+.-- .|.|++
T Consensus 139 GatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~-GSVip~F~~Qi~----~g~PlT 193 (293)
T PF02719_consen 139 GATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSR-GSVIPLFKKQIK----NGGPLT 193 (293)
T ss_dssp HHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGT-TSCHHHHHHHHH----TTSSEE
T ss_pred HHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCC-CcHHHHHHHHHH----cCCcce
Confidence 777877888877776665 4555668877887754 578999988877 788886
No 50
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.47 E-value=1.9e-13 Score=131.75 Aligned_cols=170 Identities=14% Similarity=0.040 Sum_probs=110.8
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCC
Q 019990 3 KNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDV 82 (332)
Q Consensus 3 ~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (332)
.++|||+||||+||||++|+..|++.|+ +|+.+|+.... . . ..+.+.......++...+-+..++.++
T Consensus 118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~-------~V~~ldr~~~~-~-~---~~~~~~~~~~~~~~~~~Di~~~~~~~~ 185 (436)
T PLN02166 118 RKRLRIVVTGGAGFVGSHLVDKLIGRGD-------EVIVIDNFFTG-R-K---ENLVHLFGNPRFELIRHDVVEPILLEV 185 (436)
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHCCC-------EEEEEeCCCCc-c-H---hHhhhhccCCceEEEECccccccccCC
Confidence 3568999999999999999999999876 89999964210 0 0 011110000000111111123446789
Q ss_pred cEEEEecCCCC--CCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHH----HHHHHC----CCCCCCc
Q 019990 83 NIAVMVGGFPR--KEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNAL----ILKEFA----PSIPAKN 152 (332)
Q Consensus 83 DiVi~~ag~~~--~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~----~~~~~~----~~~~~~~ 152 (332)
|+|||+|+... ....+..+.+..|+.++.++++++++++ .++|++|+. .+... ...+.. ..+.+..
T Consensus 186 D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g---~r~V~~SS~-~VYg~~~~~p~~E~~~~~~~p~~p~s 261 (436)
T PLN02166 186 DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG---ARFLLTSTS-EVYGDPLEHPQKETYWGNVNPIGERS 261 (436)
T ss_pred CEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhC---CEEEEECcH-HHhCCCCCCCCCccccccCCCCCCCC
Confidence 99999997532 1112345678899999999999999874 366766652 11000 000100 0122345
Q ss_pred EEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecC
Q 019990 153 ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNH 188 (332)
Q Consensus 153 i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~h 188 (332)
.|+.+|...+++...+++..+++...+|.++|||++
T Consensus 262 ~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~ 297 (436)
T PLN02166 262 CYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPR 297 (436)
T ss_pred chHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCC
Confidence 789999999999988999999999999999999985
No 51
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.47 E-value=4.2e-13 Score=125.32 Aligned_cols=179 Identities=11% Similarity=0.083 Sum_probs=114.9
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh-cc-CCccceEEeCCHHHHhC
Q 019990 3 KNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA-AF-PLLKGVVATTDVVEACK 80 (332)
Q Consensus 3 ~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~-~~-~~~~~v~~~~~~~~a~~ 80 (332)
.++++|+||||+||||++|+..|++.|. +|++++++............+... .. ....|++...++.++++
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 79 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGY-------AVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIA 79 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCC-------EEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHh
Confidence 4568999999999999999999998875 776666543110000000011100 01 11245555555677788
Q ss_pred CCcEEEEecCCCCCC-CCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhH-------HHHHHHH--------
Q 019990 81 DVNIAVMVGGFPRKE-GMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTN-------ALILKEF-------- 144 (332)
Q Consensus 81 ~aDiVi~~ag~~~~~-~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~-------~~~~~~~-------- 144 (332)
++|+|||+|+..... ..+..+++..|+.++.++++++.+.. .-.+++++|+....- ...+.+.
T Consensus 80 ~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~-~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~ 158 (338)
T PLN00198 80 GCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAK-SVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFL 158 (338)
T ss_pred cCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeecceeeeccCCCCCCceeccccCCchhhh
Confidence 999999999853222 12223466889999999999998863 123666666421100 0000000
Q ss_pred CCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecCC
Q 019990 145 APSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHS 189 (332)
Q Consensus 145 ~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg 189 (332)
....+|...|+.+|...+++...+++.+|++...+|.++|||++.
T Consensus 159 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~ 203 (338)
T PLN00198 159 TSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSL 203 (338)
T ss_pred hhcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCc
Confidence 001234557899999999999999999999999999999999853
No 52
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.46 E-value=1.9e-13 Score=120.68 Aligned_cols=193 Identities=15% Similarity=0.078 Sum_probs=133.8
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh-ccCC-ccceEEeCCHHHHhC--C
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA-AFPL-LKGVVATTDVVEACK--D 81 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~-~~~~-~~~v~~~~~~~~a~~--~ 81 (332)
|+++||||+|||||+.+..++.+..- .+|+.+|.-+...+... ..++.+. ...+ ..++.+...+.+.++ +
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d-----~~v~~~DkLTYAgn~~~-l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~ 74 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPD-----DHVVNLDKLTYAGNLEN-LADVEDSPRYRFVQGDICDRELVDRLFKEYQ 74 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCC-----ceEEEEecccccCCHHH-HHhhhcCCCceEEeccccCHHHHHHHHHhcC
Confidence 57999999999999999998876431 26888886442222211 1122221 1112 356665556667776 6
Q ss_pred CcEEEEecCCC---CCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeC-Ch--hhH--HHHHHHHCCCCCCCcE
Q 019990 82 VNIAVMVGGFP---RKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVAN-PA--NTN--ALILKEFAPSIPAKNI 153 (332)
Q Consensus 82 aDiVi~~ag~~---~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~sn-p~--~~~--~~~~~~~~~~~~~~~i 153 (332)
.|+|+|.|+-. |+- .....+++.|+-++..++++++++. ...+++-+|. -| +.. ...+.+. +.++|+.+
T Consensus 75 ~D~VvhfAAESHVDRSI-~~P~~Fi~TNv~GT~~LLEaar~~~-~~frf~HISTDEVYG~l~~~~~~FtE~-tp~~PsSP 151 (340)
T COG1088 75 PDAVVHFAAESHVDRSI-DGPAPFIQTNVVGTYTLLEAARKYW-GKFRFHHISTDEVYGDLGLDDDAFTET-TPYNPSSP 151 (340)
T ss_pred CCeEEEechhccccccc-cChhhhhhcchHHHHHHHHHHHHhc-ccceEEEeccccccccccCCCCCcccC-CCCCCCCC
Confidence 89999998643 222 2335688999999999999999995 3346666663 11 110 0123333 67999999
Q ss_pred EEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecCC--CceeecccCcccccCCCCcchh
Q 019990 154 TCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHS--STQYPDVNHATVTTSKGEKPVR 211 (332)
Q Consensus 154 ~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg--~~~v~~~s~~~v~~~~~~~p~~ 211 (332)
|+.+|-.+..+.+.+.+.+|++....++.+-||+.. +..+|....-.+ .|+|+.
T Consensus 152 YSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal----~g~~lp 207 (340)
T COG1088 152 YSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINAL----LGKPLP 207 (340)
T ss_pred cchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHH----cCCCCc
Confidence 999999999999999999999999999999999843 778887765555 455553
No 53
>PF02056 Glyco_hydro_4: Family 4 glycosyl hydrolase; InterPro: IPR001088 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 4 GH4 from CAZY comprises enzymes with several known activities; 6-phospho-beta-glucosidase (3.2.1.86 from EC); 6-phospho-alpha-glucosidase (3.2.1.122 from EC); alpha-galactosidase (3.2.1.22 from EC). 6-phospho-alpha-glucosidase requires both NAD(H) and divalent metal (Mn2+, Fe2+, Co2+, or Ni2+) for activity [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1U8X_X 1S6Y_A 3FEF_B 1VJT_A 1UP4_A 1UP6_C 1UP7_E 1OBB_A.
Probab=99.45 E-value=8.2e-12 Score=105.05 Aligned_cols=156 Identities=21% Similarity=0.251 Sum_probs=99.9
Q ss_pred EEEEEcCCChhHHHH--HHHHHhcccCCCCCCeEEEEEecccchhhhhhh---HhhhhhhccCCccceEEeCCHHHHhCC
Q 019990 7 RVLVTGAAGQIGYAL--VPMIARGIMLGPDQPVILHMLDIEPAAEALNGV---KMELIDAAFPLLKGVVATTDVVEACKD 81 (332)
Q Consensus 7 kI~VtGaaG~IGs~l--~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~---~~dl~~~~~~~~~~v~~~~~~~~a~~~ 81 (332)
||+|+|| |.+-... ...|.....++ ..+++|+|++. +++... ...+.... .....+..++|..+|++|
T Consensus 1 KI~iIGa-GS~~~~~~l~~~l~~~~~l~---~~ei~L~Did~--~RL~~~~~~~~~~~~~~-~~~~~v~~ttd~~eAl~g 73 (183)
T PF02056_consen 1 KITIIGA-GSTYFPLLLLGDLLRTEELS---GSEIVLMDIDE--ERLEIVERLARRMVEEA-GADLKVEATTDRREALEG 73 (183)
T ss_dssp EEEEETT-TSCCHHHHHHHHHHCTTTST---EEEEEEE-SCH--HHHHHHHHHHHHHHHHC-TTSSEEEEESSHHHHHTT
T ss_pred CEEEECC-chHhhHHHHHHHHhcCccCC---CcEEEEEcCCH--HHHHHHHHHHHHHHHhc-CCCeEEEEeCCHHHHhCC
Confidence 7999996 6554432 22333322221 24999999975 444421 11111111 112356778999999999
Q ss_pred CcEEEEecCC------------CCCCCCCh--------hH--HHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHH
Q 019990 82 VNIAVMVGGF------------PRKEGMER--------KD--VMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNAL 139 (332)
Q Consensus 82 aDiVi~~ag~------------~~~~~~~~--------~~--~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~ 139 (332)
||+||.+..+ |.+.|... .. ..-++++.+.++++.++++| |+++++++|||+..++.
T Consensus 74 ADfVi~~irvGg~~~r~~De~Ip~k~Gi~~~~~eT~G~GG~~~alRtipv~~~ia~~i~~~~-PdAw~iNytNP~~~vt~ 152 (183)
T PF02056_consen 74 ADFVINQIRVGGLEAREIDEEIPLKYGIVGTIQETVGPGGFFRALRTIPVMLDIARDIEELC-PDAWLINYTNPMGIVTE 152 (183)
T ss_dssp ESEEEE---TTHHHHHHHHHHTGGCCTTT-BTTSSSTHHHHHHHHHHHHHHHHHHHHHHHHT-TTSEEEE-SSSHHHHHH
T ss_pred CCEEEEEeeecchHHHHHHHHHHHHhCCccccccccCccHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEeccChHHHHHH
Confidence 9999998632 33333221 11 23467999999999999998 99999999999999999
Q ss_pred HHHHHCCCCCCCcEEEeecccHHHHHHHHHHHcCC
Q 019990 140 ILKEFAPSIPAKNITCLTRLDHNRAMGQISERLKV 174 (332)
Q Consensus 140 ~~~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v 174 (332)
.+.+. ++..+++|.|+- ..-....+|+.+|+
T Consensus 153 a~~r~---~~~~k~vGlCh~-~~~~~~~la~~L~~ 183 (183)
T PF02056_consen 153 ALSRY---TPKIKVVGLCHG-PQGTRRQLAKLLGM 183 (183)
T ss_dssp HHHHH---STTSEEEEE-SH-HHHHHHHHHHHHT-
T ss_pred HHHHh---CCCCCEEEECCC-HHHHHHHHHHHhCc
Confidence 88876 344679999987 45667778888874
No 54
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.43 E-value=5.8e-13 Score=128.56 Aligned_cols=169 Identities=14% Similarity=0.048 Sum_probs=108.9
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
+.|||+||||+||||++|+..|++.++ +|+.+|+.... . ...... +...+ ..++...+-+..++.++|
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~-------~V~~ld~~~~~-~-~~~~~~--~~~~~-~~~~i~~D~~~~~l~~~D 185 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGD-------SVIVVDNFFTG-R-KENVMH--HFSNP-NFELIRHDVVEPILLEVD 185 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcC-------EEEEEeCCCcc-c-hhhhhh--hccCC-ceEEEECCccChhhcCCC
Confidence 458999999999999999999999875 78888863210 0 111000 00000 001111111234567899
Q ss_pred EEEEecCCCC--CCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHH----HHHHHC----CCCCCCcE
Q 019990 84 IAVMVGGFPR--KEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNAL----ILKEFA----PSIPAKNI 153 (332)
Q Consensus 84 iVi~~ag~~~--~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~----~~~~~~----~~~~~~~i 153 (332)
+|||+|+... ....+..+.++.|+.++.++++++++.+ .++|++|+.. +-.. ...+.. ....+...
T Consensus 186 ~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g---~r~V~~SS~~-VYg~~~~~p~~E~~~~~~~P~~~~s~ 261 (442)
T PLN02206 186 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSE-VYGDPLQHPQVETYWGNVNPIGVRSC 261 (442)
T ss_pred EEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC---CEEEEECChH-HhCCCCCCCCCccccccCCCCCccch
Confidence 9999997532 1112345678899999999999999874 3677766531 1000 000100 01122346
Q ss_pred EEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecC
Q 019990 154 TCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNH 188 (332)
Q Consensus 154 ~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~h 188 (332)
|+.+|...+++...+++.++++...+|.++|||++
T Consensus 262 Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~ 296 (442)
T PLN02206 262 YDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPR 296 (442)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCC
Confidence 88899999999888888899999999999999975
No 55
>PLN02650 dihydroflavonol-4-reductase
Probab=99.42 E-value=9e-13 Score=123.78 Aligned_cols=178 Identities=15% Similarity=0.106 Sum_probs=116.8
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh-----ccC-CccceEEeCC
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA-----AFP-LLKGVVATTD 74 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~-----~~~-~~~~v~~~~~ 74 (332)
|-.+.++|+||||+||||++++..|++.|. +|++++++.. ..... .++... .+. ...++.....
T Consensus 1 ~~~~~k~iLVTGatGfIGs~l~~~L~~~G~-------~V~~~~r~~~--~~~~~-~~~~~~~~~~~~~~~v~~Dl~d~~~ 70 (351)
T PLN02650 1 MGSQKETVCVTGASGFIGSWLVMRLLERGY-------TVRATVRDPA--NVKKV-KHLLDLPGATTRLTLWKADLAVEGS 70 (351)
T ss_pred CCCCCCEEEEeCCcHHHHHHHHHHHHHCCC-------EEEEEEcCcc--hhHHH-HHHHhccCCCCceEEEEecCCChhh
Confidence 667788999999999999999999999875 7887776431 11111 111110 011 1245555556
Q ss_pred HHHHhCCCcEEEEecCCCCCCC-CChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHH-----HHHHHHCC--
Q 019990 75 VVEACKDVNIAVMVGGFPRKEG-MERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNA-----LILKEFAP-- 146 (332)
Q Consensus 75 ~~~a~~~aDiVi~~ag~~~~~~-~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~-----~~~~~~~~-- 146 (332)
+.++++++|+|||+|+...... .+....++.|+.++.++++++.+++ .-.++|++|+....-. +...+...
T Consensus 71 ~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~ 149 (351)
T PLN02650 71 FDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAK-TVRRIVFTSSAGTVNVEEHQKPVYDEDCWSD 149 (351)
T ss_pred HHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcC-CceEEEEecchhhcccCCCCCCccCcccCCc
Confidence 6777889999999997532211 2223567889999999999998864 1136666665311100 00011000
Q ss_pred -----C-CCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecCC
Q 019990 147 -----S-IPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHS 189 (332)
Q Consensus 147 -----~-~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg 189 (332)
. .++...|+.+|+..+.+...+++.+|++...+|+.+|||+..
T Consensus 150 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~ 198 (351)
T PLN02650 150 LDFCRRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFI 198 (351)
T ss_pred hhhhhccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCC
Confidence 0 011236888999999999999999999999999999999853
No 56
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=99.41 E-value=6.1e-13 Score=125.85 Aligned_cols=175 Identities=13% Similarity=0.082 Sum_probs=114.0
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhC
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACK 80 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~ 80 (332)
|....|||+||||+||||++++..|++.|+ +|+.+|+.... .... ..........|+.....+.++++
T Consensus 17 ~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~-------~V~~v~r~~~~-~~~~----~~~~~~~~~~Dl~d~~~~~~~~~ 84 (370)
T PLN02695 17 WPSEKLRICITGAGGFIASHIARRLKAEGH-------YIIASDWKKNE-HMSE----DMFCHEFHLVDLRVMENCLKVTK 84 (370)
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHhCCC-------EEEEEEecccc-cccc----ccccceEEECCCCCHHHHHHHHh
Confidence 445678999999999999999999998876 89999874311 1110 00000011234443344555678
Q ss_pred CCcEEEEecCCCCCCC---CChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhh--H---H--HHHHHHC-CCCC
Q 019990 81 DVNIAVMVGGFPRKEG---MERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANT--N---A--LILKEFA-PSIP 149 (332)
Q Consensus 81 ~aDiVi~~ag~~~~~~---~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~--~---~--~~~~~~~-~~~~ 149 (332)
++|+|||+|+.....+ .........|+.++.++++++++.+ .. ++|++|+..-. . . ..+.+.. ...+
T Consensus 85 ~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~-vk-~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~ 162 (370)
T PLN02695 85 GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARING-VK-RFFYASSACIYPEFKQLETNVSLKESDAWPAE 162 (370)
T ss_pred CCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhC-CC-EEEEeCchhhcCCccccCcCCCcCcccCCCCC
Confidence 9999999997532111 1122346779999999999998874 22 56666653100 0 0 0011100 1234
Q ss_pred CCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecCC
Q 019990 150 AKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHS 189 (332)
Q Consensus 150 ~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg 189 (332)
|...|+.++...+++...+++.++++...+|.++|||+++
T Consensus 163 p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~ 202 (370)
T PLN02695 163 PQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFG 202 (370)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCC
Confidence 5557899999999998888899999999999999999865
No 57
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.41 E-value=1.3e-12 Score=126.19 Aligned_cols=178 Identities=14% Similarity=0.175 Sum_probs=112.6
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchh-h----hh------hhHhhhh---h---hccC-C
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAE-A----LN------GVKMELI---D---AAFP-L 65 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~-~----~~------~~~~dl~---~---~~~~-~ 65 (332)
++++|+||||+||||++|+..|++.|. +|+++|+..... . .. .....+. + .... .
T Consensus 46 ~~k~VLVTGatGfIGs~Lv~~L~~~G~-------~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v 118 (442)
T PLN02572 46 KKKKVMVIGGDGYCGWATALHLSKRGY-------EVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELY 118 (442)
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEE
Confidence 468899999999999999999998875 889888421100 0 00 0000110 0 0111 1
Q ss_pred ccceEEeCCHHHHhC--CCcEEEEecCCCCCC---CCC--hhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhh--
Q 019990 66 LKGVVATTDVVEACK--DVNIAVMVGGFPRKE---GME--RKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANT-- 136 (332)
Q Consensus 66 ~~~v~~~~~~~~a~~--~aDiVi~~ag~~~~~---~~~--~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~-- 136 (332)
..|+.....+.++++ ++|+|||+|+....+ ..+ ....++.|+.++.++++++++++ ...+++.+|+..-.
T Consensus 119 ~~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g-v~~~~V~~SS~~vYG~ 197 (442)
T PLN02572 119 VGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA-PDCHLVKLGTMGEYGT 197 (442)
T ss_pred ECCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC-CCccEEEEecceecCC
Confidence 245555555666666 489999998653211 111 12345789999999999999885 33356655532100
Q ss_pred -HHHH----HH------HHC--CCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecCC
Q 019990 137 -NALI----LK------EFA--PSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHS 189 (332)
Q Consensus 137 -~~~~----~~------~~~--~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg 189 (332)
..++ +. +.. ....|...|+.+|+..+.+...+++.+|++...+|.++|||++.
T Consensus 198 ~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~ 263 (442)
T PLN02572 198 PNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRT 263 (442)
T ss_pred CCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCC
Confidence 0000 00 000 01234458999999999999999999999999999999999864
No 58
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.39 E-value=1.5e-12 Score=124.57 Aligned_cols=201 Identities=19% Similarity=0.210 Sum_probs=136.3
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh----c-cCCccceEEeCCHHHH
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA----A-FPLLKGVVATTDVVEA 78 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~----~-~~~~~~v~~~~~~~~a 78 (332)
+.++|+||||+|.||+.++.++++.+. .+++++|+++. ++.....++.+. . .++.+++.+...+..+
T Consensus 249 ~gK~vLVTGagGSiGsel~~qil~~~p------~~i~l~~~~E~--~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~ 320 (588)
T COG1086 249 TGKTVLVTGGGGSIGSELCRQILKFNP------KEIILFSRDEY--KLYLIDMELREKFPELKLRFYIGDVRDRDRVERA 320 (588)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHhcCC------CEEEEecCchH--HHHHHHHHHHhhCCCcceEEEecccccHHHHHHH
Confidence 468899999999999999999998753 49999998753 333333344331 1 1235788887778888
Q ss_pred hCC--CcEEEEecCCCCCC--CCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCcEE
Q 019990 79 CKD--VNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNIT 154 (332)
Q Consensus 79 ~~~--aDiVi~~ag~~~~~--~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~i~ 154 (332)
+++ .|+|+|.|+..+-| +....+-.+.|+-+++++++++.+++ -. +++..|. | ..-+|-+++
T Consensus 321 ~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~-V~-~~V~iST--D----------KAV~PtNvm 386 (588)
T COG1086 321 MEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNG-VK-KFVLIST--D----------KAVNPTNVM 386 (588)
T ss_pred HhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhC-CC-EEEEEec--C----------cccCCchHh
Confidence 988 99999999875544 23345667899999999999999986 33 4444442 1 112344455
Q ss_pred EeecccHHHHHHHHHHHcC---CCCCCeeeeEEEecCCCceeecccCcccccCCCCcchhhhccccc----c-chhHHHH
Q 019990 155 CLTRLDHNRAMGQISERLK---VHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVADDN----W-LNTEFIT 226 (332)
Q Consensus 155 ~~t~l~~~r~~~~~a~~~~---v~~~~v~~~~V~G~hg~~~v~~~s~~~v~~~~~~~p~~~~~~~~~----~-~~~~~~~ 226 (332)
|.||..++.+...+++..+ .....||.=||+|.. ++.+|+|.+.-- .|.|++ +.|.. | ...|-.+
T Consensus 387 GaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSr-GSViPlFk~QI~----~GgplT--vTdp~mtRyfMTI~EAv~ 459 (588)
T COG1086 387 GATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSR-GSVIPLFKKQIA----EGGPLT--VTDPDMTRFFMTIPEAVQ 459 (588)
T ss_pred hHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCC-CCCHHHHHHHHH----cCCCcc--ccCCCceeEEEEHHHHHH
Confidence 7788777877777766444 445556766777754 678999998776 677876 33431 3 2344555
Q ss_pred HHHhhHH
Q 019990 227 TVQQRGA 233 (332)
Q Consensus 227 ~v~~~~~ 233 (332)
.|-+++.
T Consensus 460 LVlqA~a 466 (588)
T COG1086 460 LVLQAGA 466 (588)
T ss_pred HHHHHHh
Confidence 5555544
No 59
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.37 E-value=1.7e-12 Score=121.84 Aligned_cols=186 Identities=13% Similarity=0.077 Sum_probs=117.2
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh-cc-CCccceEEeCCHHHHhCC-
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA-AF-PLLKGVVATTDVVEACKD- 81 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~-~~-~~~~~v~~~~~~~~a~~~- 81 (332)
+++|+||||+||||++++..|++.|. +|+.+|++... .......+... .. ....|+....++.+.+++
T Consensus 4 ~k~ilItGatG~IG~~l~~~L~~~G~-------~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 74 (349)
T TIGR02622 4 GKKVLVTGHTGFKGSWLSLWLLELGA-------EVYGYSLDPPT--SPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEF 74 (349)
T ss_pred CCEEEEECCCChhHHHHHHHHHHCCC-------EEEEEeCCCcc--chhHHHHHhhcCCceEEEccCCCHHHHHHHHhhc
Confidence 47899999999999999999998875 78888875421 11111111100 01 112355544455566664
Q ss_pred -CcEEEEecCCCCCC--CCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhH----HHHHHHHCCCCCCCcEE
Q 019990 82 -VNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTN----ALILKEFAPSIPAKNIT 154 (332)
Q Consensus 82 -aDiVi~~ag~~~~~--~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~----~~~~~~~~~~~~~~~i~ 154 (332)
.|+|||+|+.+... .......++.|+....++++++++.+ ...++|++|+..-.- .....+. +..+|...|
T Consensus 75 ~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~iv~~SS~~vyg~~~~~~~~~e~-~~~~p~~~Y 152 (349)
T TIGR02622 75 KPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIG-SVKAVVNVTSDKCYRNDEWVWGYRET-DPLGGHDPY 152 (349)
T ss_pred CCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcC-CCCEEEEEechhhhCCCCCCCCCccC-CCCCCCCcc
Confidence 59999999854221 12234567889999999999998763 223666666531100 0001111 223455678
Q ss_pred EeecccHHHHHHHHHHHc-------CCCCCCeeeeEEEecCC---CceeecccCccc
Q 019990 155 CLTRLDHNRAMGQISERL-------KVHVSDVKNVIIWGNHS---STQYPDVNHATV 201 (332)
Q Consensus 155 ~~t~l~~~r~~~~~a~~~-------~v~~~~v~~~~V~G~hg---~~~v~~~s~~~v 201 (332)
+.+|...+++...+++.+ +++...+|..+|||+.. ...+|.+-+...
T Consensus 153 ~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~ 209 (349)
T TIGR02622 153 SSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFS 209 (349)
T ss_pred hhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHh
Confidence 999999999888888765 88899999999999753 244565544444
No 60
>PLN02427 UDP-apiose/xylose synthase
Probab=99.37 E-value=3.2e-12 Score=121.63 Aligned_cols=172 Identities=12% Similarity=0.069 Sum_probs=110.5
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhc-ccCCCCCCeEEEEEecccchhhhhhhHhhhh----hhccC-CccceEEeCCHHH
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARG-IMLGPDQPVILHMLDIEPAAEALNGVKMELI----DAAFP-LLKGVVATTDVVE 77 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~-~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~----~~~~~-~~~~v~~~~~~~~ 77 (332)
++|||+||||+||||++|+..|++. +. +|+.+|+... ..... .... +.... ...|+....++.+
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~-------~V~~l~r~~~--~~~~l-~~~~~~~~~~~~~~~~~Dl~d~~~l~~ 82 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPH-------KVLALDVYND--KIKHL-LEPDTVPWSGRIQFHRINIKHDSRLEG 82 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCC-------EEEEEecCch--hhhhh-hccccccCCCCeEEEEcCCCChHHHHH
Confidence 5789999999999999999999986 44 7888886431 11110 0000 00011 1235554455677
Q ss_pred HhCCCcEEEEecCCCCC--CCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhh----------HHHH-----
Q 019990 78 ACKDVNIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANT----------NALI----- 140 (332)
Q Consensus 78 a~~~aDiVi~~ag~~~~--~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~----------~~~~----- 140 (332)
+++++|+|||+|+.... ......+.+..|+....++++++++.+ .++|++|+..-. -.++
T Consensus 83 ~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~---~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~ 159 (386)
T PLN02427 83 LIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPA 159 (386)
T ss_pred HhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC---CEEEEEeeeeeeCCCcCCCCCcccccccccc
Confidence 78899999999986321 111223456779999999999998764 366766652100 0000
Q ss_pred ---HHHHCCC--C----CCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecC
Q 019990 141 ---LKEFAPS--I----PAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNH 188 (332)
Q Consensus 141 ---~~~~~~~--~----~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~h 188 (332)
..+..+. + .+...|+.+|...+++...+++..+++...+|.++|||++
T Consensus 160 ~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~ 216 (386)
T PLN02427 160 FYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPR 216 (386)
T ss_pred cccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCC
Confidence 0000000 0 1223588899999999888888899999999999999985
No 61
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.35 E-value=5.6e-12 Score=117.00 Aligned_cols=177 Identities=14% Similarity=0.061 Sum_probs=115.8
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhh---hh--cc-CCccceEEeCC
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELI---DA--AF-PLLKGVVATTD 74 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~---~~--~~-~~~~~v~~~~~ 74 (332)
|.-+.++|+||||+||||++++..|++.|+ +|++++++.. ..... ..+. .. .. ....|+....+
T Consensus 1 ~~~~~k~vlVtG~~G~IG~~l~~~L~~~G~-------~V~~~~r~~~--~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~ 70 (325)
T PLN02989 1 MADGGKVVCVTGASGYIASWIVKLLLFRGY-------TINATVRDPK--DRKKT-DHLLALDGAKERLKLFKADLLDEGS 70 (325)
T ss_pred CCCCCCEEEEECCchHHHHHHHHHHHHCCC-------EEEEEEcCCc--chhhH-HHHHhccCCCCceEEEeCCCCCchH
Confidence 666678999999999999999999999886 7777665431 11111 1111 00 01 11245655556
Q ss_pred HHHHhCCCcEEEEecCCCCCC--CCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHH--------HHHHH
Q 019990 75 VVEACKDVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNAL--------ILKEF 144 (332)
Q Consensus 75 ~~~a~~~aDiVi~~ag~~~~~--~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~--------~~~~~ 144 (332)
+.++++++|+|||+||..... ..+....+..|+.++.++++++.++. ...++|++|+-...... .+.+.
T Consensus 71 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~-~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~ 149 (325)
T PLN02989 71 FELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVS-SVKRVILTSSMAAVLAPETKLGPNDVVDET 149 (325)
T ss_pred HHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcC-CceEEEEecchhheecCCccCCCCCccCcC
Confidence 677788999999999864211 11224567889999999999998763 12366666642111000 01111
Q ss_pred CCCCCC------CcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecCC
Q 019990 145 APSIPA------KNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHS 189 (332)
Q Consensus 145 ~~~~~~------~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg 189 (332)
+..+| ...|+.+|+..+++...+++.++++...+|.++|||+..
T Consensus 150 -~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~ 199 (325)
T PLN02989 150 -FFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPIL 199 (325)
T ss_pred -CCCchhHhcccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCC
Confidence 11111 246899999999999888999999999999999999753
No 62
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.35 E-value=1e-11 Score=115.01 Aligned_cols=172 Identities=13% Similarity=0.063 Sum_probs=112.0
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh-----cc-CCccceEEeCCHHH
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA-----AF-PLLKGVVATTDVVE 77 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~-----~~-~~~~~v~~~~~~~~ 77 (332)
+.++|+||||+||||++++..|++.|+ +|++++++... .. ....+... .. ....|+.....+.+
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~-------~V~~~~r~~~~--~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~ 72 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGY-------TVKATVRDPND--PK-KTEHLLALDGAKERLHLFKANLLEEGSFDS 72 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCC-------EEEEEEcCCCc--hh-hHHHHHhccCCCCceEEEeccccCcchHHH
Confidence 457899999999999999999999886 78777764321 11 11111100 01 11245655556777
Q ss_pred HhCCCcEEEEecCCCCC-CCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHH---------HHHHHCCC
Q 019990 78 ACKDVNIAVMVGGFPRK-EGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNAL---------ILKEFAPS 147 (332)
Q Consensus 78 a~~~aDiVi~~ag~~~~-~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~---------~~~~~~~~ 147 (332)
+++++|+|||+|+.... ...+..+.++.|+.++.++++++++.... .++|++|+-. ...| .+.+. ..
T Consensus 73 ~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~-~~~v~~SS~~-~~~y~~~~~~~~~~~~E~-~~ 149 (322)
T PLN02662 73 VVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSV-KRVVVTSSMA-AVAYNGKPLTPDVVVDET-WF 149 (322)
T ss_pred HHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCC-CEEEEccCHH-HhcCCCcCCCCCCcCCcc-cC
Confidence 88999999999986422 12233357788999999999999876212 2566655421 1101 00110 00
Q ss_pred CCC------CcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecC
Q 019990 148 IPA------KNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNH 188 (332)
Q Consensus 148 ~~~------~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~h 188 (332)
..| ...|+.++...+++...+++..+++...+|..+|||+.
T Consensus 150 ~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~ 196 (322)
T PLN02662 150 SDPAFCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPL 196 (322)
T ss_pred CChhHhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCC
Confidence 111 12578889888888888888899999999999999975
No 63
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=99.33 E-value=5.6e-12 Score=127.87 Aligned_cols=169 Identities=14% Similarity=0.121 Sum_probs=112.8
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhc-ccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccC-CccceEEeCC-HHHHhC
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARG-IMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFP-LLKGVVATTD-VVEACK 80 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~-~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~-~~~~v~~~~~-~~~a~~ 80 (332)
++|||+||||+||||++|+..|++. ++ +|+.+|+... .... . +.+.... ...|++...+ +.++++
T Consensus 314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~-------~V~~l~r~~~--~~~~-~--~~~~~~~~~~gDl~d~~~~l~~~l~ 381 (660)
T PRK08125 314 RRTRVLILGVNGFIGNHLTERLLRDDNY-------EVYGLDIGSD--AISR-F--LGHPRFHFVEGDISIHSEWIEYHIK 381 (660)
T ss_pred cCCEEEEECCCchHHHHHHHHHHhCCCc-------EEEEEeCCch--hhhh-h--cCCCceEEEeccccCcHHHHHHHhc
Confidence 5789999999999999999999974 55 8999997532 1110 0 0010011 1245543333 356688
Q ss_pred CCcEEEEecCCCCC--CCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHH----HHHHHHCC-----CC-
Q 019990 81 DVNIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNA----LILKEFAP-----SI- 148 (332)
Q Consensus 81 ~aDiVi~~ag~~~~--~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~----~~~~~~~~-----~~- 148 (332)
++|+|||+|+.... ......+.++.|+..+.++++++++++ + ++|++|+.. +.. ..+.+..+ ..
T Consensus 382 ~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~--~~V~~SS~~-vyg~~~~~~~~E~~~~~~~~p~~ 457 (660)
T PRK08125 382 KCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-K--RIIFPSTSE-VYGMCTDKYFDEDTSNLIVGPIN 457 (660)
T ss_pred CCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-C--eEEEEcchh-hcCCCCCCCcCccccccccCCCC
Confidence 99999999986431 122334577889999999999999874 2 666666521 100 00111000 00
Q ss_pred CCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecC
Q 019990 149 PAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNH 188 (332)
Q Consensus 149 ~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~h 188 (332)
++...|+.+|...+++...+++.++++...+|.++|||++
T Consensus 458 ~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~ 497 (660)
T PRK08125 458 KQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPR 497 (660)
T ss_pred CCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCC
Confidence 1223799999999999999999999999999999999985
No 64
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.33 E-value=5.4e-12 Score=118.31 Aligned_cols=167 Identities=11% Similarity=0.071 Sum_probs=108.4
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhc-ccCCCCCCeEEEEEecccchhhhhhhHhhhhh-hccC-CccceE-EeCCHHHHhC
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARG-IMLGPDQPVILHMLDIEPAAEALNGVKMELID-AAFP-LLKGVV-ATTDVVEACK 80 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~-~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~-~~~~-~~~~v~-~~~~~~~a~~ 80 (332)
||||+||||+||||++|+..|++. ++ +|+.+|+.. +... ++.. ..+. ...|+. ....+.++++
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~-------~V~~~~r~~--~~~~----~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 67 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDW-------EVYGMDMQT--DRLG----DLVNHPRMHFFEGDITINKEWIEYHVK 67 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCC-------eEEEEeCcH--HHHH----HhccCCCeEEEeCCCCCCHHHHHHHHc
Confidence 468999999999999999999874 44 889888642 1111 1111 0011 123443 2233456678
Q ss_pred CCcEEEEecCCCCC--CCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHH----HHHHHHCCCC------
Q 019990 81 DVNIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNA----LILKEFAPSI------ 148 (332)
Q Consensus 81 ~aDiVi~~ag~~~~--~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~----~~~~~~~~~~------ 148 (332)
++|+|||+|+.... ...+....+..|+..+.++++++++.+ .++|++|+.. +.. ..+.+..+.+
T Consensus 68 ~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~---~~~v~~SS~~-vyg~~~~~~~~ee~~~~~~~~~~ 143 (347)
T PRK11908 68 KCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG---KHLVFPSTSE-VYGMCPDEEFDPEASPLVYGPIN 143 (347)
T ss_pred CCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC---CeEEEEecce-eeccCCCcCcCccccccccCcCC
Confidence 99999999875321 122234456788999999999998863 3667666531 100 0000100111
Q ss_pred CCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecC
Q 019990 149 PAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNH 188 (332)
Q Consensus 149 ~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~h 188 (332)
+|...|+.++...+++...+++..+++...+|.++|||++
T Consensus 144 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~ 183 (347)
T PRK11908 144 KPRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPG 183 (347)
T ss_pred CccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCC
Confidence 2233688899999998888888899999999999999974
No 65
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.33 E-value=1.1e-11 Score=116.47 Aligned_cols=176 Identities=14% Similarity=0.081 Sum_probs=110.1
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh-cc-CCccceEEeCCHHHHhCC
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA-AF-PLLKGVVATTDVVEACKD 81 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~-~~-~~~~~v~~~~~~~~a~~~ 81 (332)
..|||+||||+||||++++..|++.|. +|++++++. +.......++... .+ ....|+.....+.+++++
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 79 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGY-------TVHATLRDP--AKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKG 79 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCh--HHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcC
Confidence 468999999999999999999998875 788777642 1111111111110 01 112344444456677788
Q ss_pred CcEEEEecCCCCCC----CCChhHH-----HhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHH--------HHHHHH
Q 019990 82 VNIAVMVGGFPRKE----GMERKDV-----MSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNA--------LILKEF 144 (332)
Q Consensus 82 aDiVi~~ag~~~~~----~~~~~~~-----~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~--------~~~~~~ 144 (332)
+|+|||+|+..... ..+..+. +..|+.++.+++++++++. .-.+++++|+..-... ..+.+.
T Consensus 80 ~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~ 158 (353)
T PLN02896 80 CDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK-TVKRVVFTSSISTLTAKDSNGRWRAVVDET 158 (353)
T ss_pred CCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC-CccEEEEEechhhccccccCCCCCCccCcc
Confidence 99999999864211 0122222 3344588899999998763 1236666665211100 001110
Q ss_pred C-C-------CCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecCC
Q 019990 145 A-P-------SIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHS 189 (332)
Q Consensus 145 ~-~-------~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg 189 (332)
. . ..++...|+.+|+..+++...+++.++++...+|.++|||++.
T Consensus 159 ~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~ 211 (353)
T PLN02896 159 CQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFL 211 (353)
T ss_pred cCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCc
Confidence 0 0 0012237899999999999999999999999999999999854
No 66
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=99.33 E-value=2.6e-12 Score=118.07 Aligned_cols=159 Identities=16% Similarity=0.153 Sum_probs=101.4
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhC--CCc
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACK--DVN 83 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~--~aD 83 (332)
|||+||||+||||++++..|++.+ +++.+|+... . ...|+.....+.++++ ++|
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g--------~V~~~~~~~~--~--------------~~~Dl~d~~~~~~~~~~~~~D 56 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG--------NLIALDVHST--D--------------YCGDFSNPEGVAETVRKIRPD 56 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC--------CEEEeccccc--c--------------ccCCCCCHHHHHHHHHhcCCC
Confidence 479999999999999999998765 3666775320 0 1123333344555666 589
Q ss_pred EEEEecCCCCCC--CCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCCh---hh-HHHHHHHHCCCCCCCcEEEee
Q 019990 84 IAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPA---NT-NALILKEFAPSIPAKNITCLT 157 (332)
Q Consensus 84 iVi~~ag~~~~~--~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~---~~-~~~~~~~~~~~~~~~~i~~~t 157 (332)
+|||+|+..... ..........|+..+.++++++++.+ .++|.+|+.. +. -.+ ..+ .....|...|+.+
T Consensus 57 ~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g---~~~v~~Ss~~Vy~~~~~~p-~~E-~~~~~P~~~Yg~s 131 (299)
T PRK09987 57 VIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVG---AWVVHYSTDYVFPGTGDIP-WQE-TDATAPLNVYGET 131 (299)
T ss_pred EEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC---CeEEEEccceEECCCCCCC-cCC-CCCCCCCCHHHHH
Confidence 999999864321 12223345789999999999999874 3666666421 00 001 111 1223455578889
Q ss_pred cccHHHHHHHHHHHcCCCCCCeeeeEEEecCCCceeeccc
Q 019990 158 RLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVN 197 (332)
Q Consensus 158 ~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg~~~v~~~s 197 (332)
|+..+++...+ ..+...+|.++|||+.+.+.++.|-
T Consensus 132 K~~~E~~~~~~----~~~~~ilR~~~vyGp~~~~~~~~~~ 167 (299)
T PRK09987 132 KLAGEKALQEH----CAKHLIFRTSWVYAGKGNNFAKTML 167 (299)
T ss_pred HHHHHHHHHHh----CCCEEEEecceecCCCCCCHHHHHH
Confidence 98887766443 3345778999999986655555443
No 67
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.32 E-value=9.8e-12 Score=115.55 Aligned_cols=175 Identities=13% Similarity=0.157 Sum_probs=116.4
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc-CCccceEEeCCHHHHhCCC
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF-PLLKGVVATTDVVEACKDV 82 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~a~~~a 82 (332)
+.++|+||||+||||++++..|++.+. ..+|+++|++.. .......++..... ....|+....++.++++++
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~-----~~~V~~~~r~~~--~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~i 75 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYN-----PKKIIIYSRDEL--KQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGV 75 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCC-----CcEEEEEcCChh--HHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcC
Confidence 457899999999999999999988641 027888886531 11111111111111 1224565555677778899
Q ss_pred cEEEEecCCCCCC--CCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCcEEEeeccc
Q 019990 83 NIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLD 160 (332)
Q Consensus 83 DiVi~~ag~~~~~--~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~i~~~t~l~ 160 (332)
|+|||+||....+ ..+..+.++.|+.++.++++++.+.+ . .++|++|+. ....|...|+.++..
T Consensus 76 D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~-~-~~iV~~SS~------------~~~~p~~~Y~~sK~~ 141 (324)
T TIGR03589 76 DYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNG-V-KRVVALSTD------------KAANPINLYGATKLA 141 (324)
T ss_pred CEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-CEEEEEeCC------------CCCCCCCHHHHHHHH
Confidence 9999999864321 22345678899999999999999864 2 366666652 112334467888888
Q ss_pred HHHHHHHHH---HHcCCCCCCeeeeEEEecCCCceeecccCcc
Q 019990 161 HNRAMGQIS---ERLKVHVSDVKNVIIWGNHSSTQYPDVNHAT 200 (332)
Q Consensus 161 ~~r~~~~~a---~~~~v~~~~v~~~~V~G~hg~~~v~~~s~~~ 200 (332)
.+++...++ +..|++...+|..+|+|+.+ +.+|.|.+..
T Consensus 142 ~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~-~~i~~~~~~~ 183 (324)
T TIGR03589 142 SDKLFVAANNISGSKGTRFSVVRYGNVVGSRG-SVVPFFKSLK 183 (324)
T ss_pred HHHHHHHHHhhccccCcEEEEEeecceeCCCC-CcHHHHHHHH
Confidence 888776544 35789999999999999754 4566665443
No 68
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.31 E-value=2.3e-11 Score=112.78 Aligned_cols=175 Identities=12% Similarity=0.062 Sum_probs=112.9
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh-----cc-CCccceEEeCC
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA-----AF-PLLKGVVATTD 74 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~-----~~-~~~~~v~~~~~ 74 (332)
|.-..++|+||||+||||++++..|++.|+ +|+...++.. ... ....+... .. ....|+.....
T Consensus 1 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~--~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~ 70 (322)
T PLN02986 1 MNGGGKLVCVTGASGYIASWIVKLLLLRGY-------TVKATVRDLT--DRK-KTEHLLALDGAKERLKLFKADLLEESS 70 (322)
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEECCCc--chH-HHHHHHhccCCCCceEEEecCCCCcch
Confidence 544567999999999999999999998876 6765544321 111 11111110 00 12245655566
Q ss_pred HHHHhCCCcEEEEecCCCCC-CCCChhHHHhhhHHHHHHHHHHHHhhcCCCc-EEEEEeCChhhHHHH---------HHH
Q 019990 75 VVEACKDVNIAVMVGGFPRK-EGMERKDVMSKNVSIYKAQASALEKHAAPNC-KVLVVANPANTNALI---------LKE 143 (332)
Q Consensus 75 ~~~a~~~aDiVi~~ag~~~~-~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~-~viv~snp~~~~~~~---------~~~ 143 (332)
+.++++++|+|||+|+.... ...+..++++.|+.++.++++++++.. ++ ++|++|+.... .+. +.+
T Consensus 71 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~--~v~rvV~~SS~~~~-~~~~~~~~~~~~~~E 147 (322)
T PLN02986 71 FEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETP--SVKRVILTSSTAAV-LFRQPPIEANDVVDE 147 (322)
T ss_pred HHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcC--CccEEEEecchhhe-ecCCccCCCCCCcCc
Confidence 77788999999999986321 112333467889999999999998752 23 56666643211 000 001
Q ss_pred HCCCC-----CCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecC
Q 019990 144 FAPSI-----PAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNH 188 (332)
Q Consensus 144 ~~~~~-----~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~h 188 (332)
..... ++...|+.+|...+++...+++.++++...+|+.+|||+.
T Consensus 148 ~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~ 197 (322)
T PLN02986 148 TFFSDPSLCRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPL 197 (322)
T ss_pred ccCCChHHhhccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCC
Confidence 00000 1234688899999999888888899999999999999974
No 69
>PLN02214 cinnamoyl-CoA reductase
Probab=99.31 E-value=7.1e-12 Score=117.37 Aligned_cols=172 Identities=15% Similarity=0.093 Sum_probs=114.6
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh--cc-CCccceEEeCCHHHHhCC
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA--AF-PLLKGVVATTDVVEACKD 81 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~--~~-~~~~~v~~~~~~~~a~~~ 81 (332)
+++|+||||+||||++++..|++.|+ +|+.++++... ........+... .. ....|+....++.+++++
T Consensus 10 ~~~vlVTGatGfIG~~l~~~L~~~G~-------~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 81 (342)
T PLN02214 10 GKTVCVTGAGGYIASWIVKILLERGY-------TVKGTVRNPDD-PKNTHLRELEGGKERLILCKADLQDYEALKAAIDG 81 (342)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcC-------EEEEEeCCchh-hhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhc
Confidence 57899999999999999999999886 78888764321 011111111110 01 112455555567778899
Q ss_pred CcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHH-------HHHHHHCC-----CCC
Q 019990 82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNA-------LILKEFAP-----SIP 149 (332)
Q Consensus 82 aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~-------~~~~~~~~-----~~~ 149 (332)
+|+|||+|+... ....+.+..|+..+.++++++++.+ .. ++|++|+...+-. ..+.+..+ ..+
T Consensus 82 ~d~Vih~A~~~~---~~~~~~~~~nv~gt~~ll~aa~~~~-v~-r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~ 156 (342)
T PLN02214 82 CDGVFHTASPVT---DDPEQMVEPAVNGAKFVINAAAEAK-VK-RVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKN 156 (342)
T ss_pred CCEEEEecCCCC---CCHHHHHHHHHHHHHHHHHHHHhcC-CC-EEEEeccceeeeccCCCCCCcccCcccCCChhhccc
Confidence 999999998642 2235578889999999999999874 22 5666664211100 01111100 011
Q ss_pred CCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecCC
Q 019990 150 AKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHS 189 (332)
Q Consensus 150 ~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg 189 (332)
+...|+.+|...+++...+++.+|++...+|..+|||++.
T Consensus 157 p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~ 196 (342)
T PLN02214 157 TKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPL 196 (342)
T ss_pred cccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCC
Confidence 2335788999999999888899999999999999999853
No 70
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.29 E-value=8.2e-12 Score=117.35 Aligned_cols=176 Identities=11% Similarity=0.061 Sum_probs=111.5
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhh-hccC-CccceEEeCCHHHHhC--
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELID-AAFP-LLKGVVATTDVVEACK-- 80 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~-~~~~-~~~~v~~~~~~~~a~~-- 80 (332)
|+||+||||+||||++++..|++.+. ..+.++|........... ..+.. .... ...|+....++.++++
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~------~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 73 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETS------DAVVVVDKLTYAGNLMSL-APVAQSERFAFEKVDICDRAELARVFTEH 73 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCC------CEEEEEecCccccchhhh-hhcccCCceEEEECCCcChHHHHHHHhhc
Confidence 46899999999999999999998775 145667753211111100 01100 0011 1235555455666676
Q ss_pred CCcEEEEecCCCCCC--CCChhHHHhhhHHHHHHHHHHHHhhc------CCC-cEEEEEeCChhhHH------HHHHHHC
Q 019990 81 DVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEKHA------APN-CKVLVVANPANTNA------LILKEFA 145 (332)
Q Consensus 81 ~aDiVi~~ag~~~~~--~~~~~~~~~~N~~~~~~i~~~i~~~~------~~~-~~viv~snp~~~~~------~~~~~~~ 145 (332)
++|+|||+||..... ........+.|+.++..+++++.++. .+. .+++.+|+.. +.. ..+.+.
T Consensus 74 ~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~-vyg~~~~~~~~~~E~- 151 (355)
T PRK10217 74 QPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDE-VYGDLHSTDDFFTET- 151 (355)
T ss_pred CCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchh-hcCCCCCCCCCcCCC-
Confidence 489999999864321 11234577889999999999998741 012 2556666532 100 001111
Q ss_pred CCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecCC
Q 019990 146 PSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHS 189 (332)
Q Consensus 146 ~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg 189 (332)
....+...|+.+|...+++...+++.++++...+|..+|||++.
T Consensus 152 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~ 195 (355)
T PRK10217 152 TPYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYH 195 (355)
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCC
Confidence 12334557899999999999999999999999999999999864
No 71
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.29 E-value=1.4e-11 Score=113.23 Aligned_cols=167 Identities=16% Similarity=0.105 Sum_probs=109.0
Q ss_pred EEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCC-cEE
Q 019990 7 RVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDV-NIA 85 (332)
Q Consensus 7 kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~a-DiV 85 (332)
+|+||||+||||++|+..|++.|+ +|+.+|+.... .... . .... ....+++......+.++++ |.|
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~--~-~~~~-~~~~d~~~~~~~~~~~~~~~d~v 68 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGH-------DVRGLDRLRDG--LDPL--L-SGVE-FVVLDLTDRDLVDELAKGVPDAV 68 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCC-------eEEEEeCCCcc--cccc--c-cccc-eeeecccchHHHHHHHhcCCCEE
Confidence 499999999999999999999876 89999975421 1100 0 0110 0112333333344556777 999
Q ss_pred EEecCCCCCCCCC---hhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHH-H----HHHHHCCCCCCCcEEEee
Q 019990 86 VMVGGFPRKEGME---RKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNA-L----ILKEFAPSIPAKNITCLT 157 (332)
Q Consensus 86 i~~ag~~~~~~~~---~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~-~----~~~~~~~~~~~~~i~~~t 157 (332)
||+|+....+... ..++...|+.+++++++++++.+ -.++++.|+ ..... . .+.+......|...|+.+
T Consensus 69 ih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~--~~~~v~~ss-~~~~~~~~~~~~~~E~~~~~~p~~~Yg~s 145 (314)
T COG0451 69 IHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG--VKRFVFASS-VSVVYGDPPPLPIDEDLGPPRPLNPYGVS 145 (314)
T ss_pred EEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEeCC-CceECCCCCCCCcccccCCCCCCCHHHHH
Confidence 9999875443322 13478899999999999999843 225555343 21110 0 111110011122258999
Q ss_pred cccHHHHHHHHHHHcCCCCCCeeeeEEEecCC
Q 019990 158 RLDHNRAMGQISERLKVHVSDVKNVIIWGNHS 189 (332)
Q Consensus 158 ~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg 189 (332)
|+..++....+++..+++...+|...|||+..
T Consensus 146 K~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~ 177 (314)
T COG0451 146 KLAAEQLLRAYARLYGLPVVILRPFNVYGPGD 177 (314)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCC
Confidence 99999999999888999999999989999864
No 72
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.28 E-value=1.1e-11 Score=116.09 Aligned_cols=174 Identities=9% Similarity=-0.034 Sum_probs=109.5
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccch---hhhhhhHhhhh---hhcc-CCccceEEeCCHHHH
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAA---EALNGVKMELI---DAAF-PLLKGVVATTDVVEA 78 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~---~~~~~~~~dl~---~~~~-~~~~~v~~~~~~~~a 78 (332)
++|+||||+||||++++..|++.|. +|+++|+.... +.+.....+.. .... ....|++....+.++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~ 73 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGY-------EVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRI 73 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCC-------EEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHH
Confidence 4899999999999999999999876 89999875321 11111000000 0001 112455544456666
Q ss_pred hCC--CcEEEEecCCCCCCC--CChhHHHhhhHHHHHHHHHHHHhhcCCC-cEEEEEeCChhhHHH----HHHHHCCCCC
Q 019990 79 CKD--VNIAVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEKHAAPN-CKVLVVANPANTNAL----ILKEFAPSIP 149 (332)
Q Consensus 79 ~~~--aDiVi~~ag~~~~~~--~~~~~~~~~N~~~~~~i~~~i~~~~~~~-~~viv~snp~~~~~~----~~~~~~~~~~ 149 (332)
+++ +|+|||+|+...... ......+..|+.++.++++++.+++... .+++++|+. .+-.. ...+ ...+.
T Consensus 74 ~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~-~vyg~~~~~~~~E-~~~~~ 151 (343)
T TIGR01472 74 IDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTS-ELYGKVQEIPQNE-TTPFY 151 (343)
T ss_pred HHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccH-HhhCCCCCCCCCC-CCCCC
Confidence 764 699999998643211 1123345678889999999999865222 356666642 11000 0111 12344
Q ss_pred CCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecC
Q 019990 150 AKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNH 188 (332)
Q Consensus 150 ~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~h 188 (332)
|...|+.+|...+++...+++.++++....+.++++|++
T Consensus 152 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~ 190 (343)
T TIGR01472 152 PRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPR 190 (343)
T ss_pred CCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCC
Confidence 566899999999999999999899877766777777764
No 73
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.27 E-value=9.9e-12 Score=126.44 Aligned_cols=188 Identities=13% Similarity=0.104 Sum_probs=115.8
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc-CCccceEEeCCHHHHh--C
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF-PLLKGVVATTDVVEAC--K 80 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~a~--~ 80 (332)
+++||+||||+||||++++..|++.+. + .+|+.+|.................... ....|+.....+...+ .
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~-~----~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~ 79 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYP-D----YKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITE 79 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCC-C----CEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhc
Confidence 578999999999999999999988632 1 278888863211111100000000000 1123443332333333 5
Q ss_pred CCcEEEEecCCCCCCC--CChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHH-------HHHHCCCCCCC
Q 019990 81 DVNIAVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALI-------LKEFAPSIPAK 151 (332)
Q Consensus 81 ~aDiVi~~ag~~~~~~--~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~-------~~~~~~~~~~~ 151 (332)
++|+|||+|+...... ....++...|+..+..+++++++.+ .-.++|.+|+. .+.... ..+ .....|.
T Consensus 80 ~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~vkr~I~~SS~-~vyg~~~~~~~~~~~E-~~~~~p~ 156 (668)
T PLN02260 80 GIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTD-EVYGETDEDADVGNHE-ASQLLPT 156 (668)
T ss_pred CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEcch-HHhCCCccccccCccc-cCCCCCC
Confidence 8999999998743211 1234567889999999999999874 22366766652 110000 001 1123344
Q ss_pred cEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecCC--CceeecccCc
Q 019990 152 NITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHS--STQYPDVNHA 199 (332)
Q Consensus 152 ~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg--~~~v~~~s~~ 199 (332)
..|+.+|...+++...+++.++++...+|.++|||++. ...+|.|...
T Consensus 157 ~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~ 206 (668)
T PLN02260 157 NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILL 206 (668)
T ss_pred CCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHH
Confidence 57899999999999888888999999999999999864 3445555333
No 74
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.24 E-value=2.5e-11 Score=113.93 Aligned_cols=175 Identities=11% Similarity=0.072 Sum_probs=110.7
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhh-hcc-CCccceEEeCCHHHHhC--C
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELID-AAF-PLLKGVVATTDVVEACK--D 81 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~-~~~-~~~~~v~~~~~~~~a~~--~ 81 (332)
|||+||||+||||++++..|++.+. ..+..+|......... ....+.. ... ....|+....++.++++ +
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~------~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 73 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQ------DSVVNVDKLTYAGNLE-SLADVSDSERYVFEHADICDRAELDRIFAQHQ 73 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCC------CeEEEecCCCccchHH-HHHhcccCCceEEEEecCCCHHHHHHHHHhcC
Confidence 4899999999999999999998764 1455566532100111 0011110 001 11235554455566665 4
Q ss_pred CcEEEEecCCCCC--CCCChhHHHhhhHHHHHHHHHHHHhhc------CCC-cEEEEEeCChhhHH--------------
Q 019990 82 VNIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEKHA------APN-CKVLVVANPANTNA-------------- 138 (332)
Q Consensus 82 aDiVi~~ag~~~~--~~~~~~~~~~~N~~~~~~i~~~i~~~~------~~~-~~viv~snp~~~~~-------------- 138 (332)
+|+|||+|+.... ......++++.|+.++..++++++++. ... .+++.+|... +..
T Consensus 74 ~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~-vyg~~~~~~~~~~~~~~ 152 (352)
T PRK10084 74 PDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDE-VYGDLPHPDEVENSEEL 152 (352)
T ss_pred CCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchh-hcCCCCccccccccccC
Confidence 8999999986432 112235678999999999999998751 011 2566666431 110
Q ss_pred HHHHHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecCC
Q 019990 139 LILKEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHS 189 (332)
Q Consensus 139 ~~~~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg 189 (332)
+.+.+. ..+.|...|+.+|...+++...+++.++++...+|...|||++.
T Consensus 153 ~~~~E~-~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~ 202 (352)
T PRK10084 153 PLFTET-TAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYH 202 (352)
T ss_pred CCcccc-CCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCc
Confidence 001111 22345568999999999999888999999999999999999863
No 75
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=99.23 E-value=4.5e-11 Score=110.09 Aligned_cols=164 Identities=16% Similarity=0.203 Sum_probs=103.2
Q ss_pred EEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCH-HHHh-----CC
Q 019990 8 VLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDV-VEAC-----KD 81 (332)
Q Consensus 8 I~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~-~~a~-----~~ 81 (332)
|+||||+||||++|+..|++.|. ..+.++|........ ..+.... ..+.....++ .+++ .+
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~------~~v~~~~~~~~~~~~----~~~~~~~---~~d~~~~~~~~~~~~~~~~~~~ 68 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGI------TDILVVDNLKDGTKF----VNLVDLD---IADYMDKEDFLAQIMAGDDFGD 68 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCC------ceEEEecCCCcchHH----Hhhhhhh---hhhhhhHHHHHHHHhcccccCC
Confidence 89999999999999999998775 146677764311000 0111110 0111111122 2222 26
Q ss_pred CcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHH----HHHHHHCCCCCCCcEEEee
Q 019990 82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNA----LILKEFAPSIPAKNITCLT 157 (332)
Q Consensus 82 aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~----~~~~~~~~~~~~~~i~~~t 157 (332)
+|+|||+|+............++.|+..+.++++++++.+ .++|+.|+.. +.. ....+. ....|...|+.+
T Consensus 69 ~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~---~~~i~~SS~~-vyg~~~~~~~~E~-~~~~p~~~Y~~s 143 (308)
T PRK11150 69 IEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE---IPFLYASSAA-TYGGRTDDFIEER-EYEKPLNVYGYS 143 (308)
T ss_pred ccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcC---CcEEEEcchH-HhCcCCCCCCccC-CCCCCCCHHHHH
Confidence 8999999985432222334567889999999999998864 3666666531 100 001111 112344468899
Q ss_pred cccHHHHHHHHHHHcCCCCCCeeeeEEEecCC
Q 019990 158 RLDHNRAMGQISERLKVHVSDVKNVIIWGNHS 189 (332)
Q Consensus 158 ~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg 189 (332)
|...+++...+++..+++...+|.+.|||++.
T Consensus 144 K~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~ 175 (308)
T PRK11150 144 KFLFDEYVRQILPEANSQICGFRYFNVYGPRE 175 (308)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeeeeecCCCC
Confidence 99989888888888899999999999999754
No 76
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=99.22 E-value=2.6e-11 Score=112.12 Aligned_cols=183 Identities=17% Similarity=0.181 Sum_probs=117.4
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCC-ccceEEeCCHHHHhCC
Q 019990 3 KNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPL-LKGVVATTDVVEACKD 81 (332)
Q Consensus 3 ~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~-~~~v~~~~~~~~a~~~ 81 (332)
.++.+++||||+||+|.||+..|++.+.. .+|+++|.............++....... ..++.....+..++++
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~-----~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~ 76 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLENELK-----LEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQG 76 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhcccc-----cEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccC
Confidence 46678999999999999999999987632 39999998653112221111110111111 2566666678888999
Q ss_pred CcEEEEecCCCCC-CCC-ChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhh---HHH-HHHHHCCCCCCC--cE
Q 019990 82 VNIAVMVGGFPRK-EGM-ERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANT---NAL-ILKEFAPSIPAK--NI 153 (332)
Q Consensus 82 aDiVi~~ag~~~~-~~~-~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~---~~~-~~~~~~~~~~~~--~i 153 (332)
+ .|+|+|..+.. ... .++...+.|+.++++++++|.+.+ ++.+|+++...+ ..+ +.....-.+|.. ..
T Consensus 77 ~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~---v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~ 152 (361)
T KOG1430|consen 77 A-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELG---VKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDP 152 (361)
T ss_pred c-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhC---CCEEEEecCceEEeCCeecccCCCCCCCccccccc
Confidence 9 77777654322 122 355677889999999999999986 333444433221 111 111211235533 27
Q ss_pred EEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecCCCceee
Q 019990 154 TCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYP 194 (332)
Q Consensus 154 ~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg~~~v~ 194 (332)
|+.|+...+++....+..-++....+|...|||+.....+|
T Consensus 153 Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~ 193 (361)
T KOG1430|consen 153 YGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLP 193 (361)
T ss_pred cchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCccccH
Confidence 89999988888766555556788899999999985455454
No 77
>PLN02583 cinnamoyl-CoA reductase
Probab=99.21 E-value=5e-11 Score=109.43 Aligned_cols=176 Identities=13% Similarity=0.046 Sum_probs=111.7
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh--cc-CCccceEEeCCHHHHhC
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA--AF-PLLKGVVATTDVVEACK 80 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~--~~-~~~~~v~~~~~~~~a~~ 80 (332)
..++|+||||+||||++++..|++.|+ +|++++++...........++... .. ....|++...++.+++.
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~-------~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~ 77 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGY-------TVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK 77 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCC-------EEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc
Confidence 356899999999999999999999886 788877632111111111112100 01 11245555556678899
Q ss_pred CCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhH-H-H------HHHHHCCCCC---
Q 019990 81 DVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTN-A-L------ILKEFAPSIP--- 149 (332)
Q Consensus 81 ~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~-~-~------~~~~~~~~~~--- 149 (332)
++|.|+|+++.+........++++.|+.++.++++++.+.... .++|++|+..... . . .+.+ ..+.
T Consensus 78 ~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v-~riV~~SS~~a~~~~~~~~~~~~~~~E--~~~~~~~ 154 (297)
T PLN02583 78 GCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTI-EKVVFTSSLTAVIWRDDNISTQKDVDE--RSWSDQN 154 (297)
T ss_pred CCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCc-cEEEEecchHheecccccCCCCCCCCc--ccCCCHH
Confidence 9999999876543211123457889999999999999886311 3666666532110 0 0 0000 0010
Q ss_pred ----CCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecCC
Q 019990 150 ----AKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHS 189 (332)
Q Consensus 150 ----~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg 189 (332)
+...|+.+|...+++...+++..+++...+|+..|||+..
T Consensus 155 ~~~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~ 198 (297)
T PLN02583 155 FCRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSL 198 (297)
T ss_pred HHhhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCC
Confidence 0114778899999998888888899999999999999753
No 78
>PLN02686 cinnamoyl-CoA reductase
Probab=99.19 E-value=5.4e-11 Score=112.47 Aligned_cols=174 Identities=13% Similarity=0.108 Sum_probs=110.6
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhh--------hcc-CCccceEEeCC
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELID--------AAF-PLLKGVVATTD 74 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~--------~~~-~~~~~v~~~~~ 74 (332)
++++|+||||+||||++++..|++.|+ +|+++..+. +..... .++.. ... ....|++...+
T Consensus 52 ~~k~VLVTGatGfIG~~lv~~L~~~G~-------~V~~~~r~~--~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~ 121 (367)
T PLN02686 52 EARLVCVTGGVSFLGLAIVDRLLRHGY-------SVRIAVDTQ--EDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPES 121 (367)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHH-HHHhhhccccccCCceEEEEcCCCCHHH
Confidence 467899999999999999999999886 777654432 111111 11110 001 11245555555
Q ss_pred HHHHhCCCcEEEEecCCCCCCCC--ChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCCh-hhHH--------HHHHH
Q 019990 75 VVEACKDVNIAVMVGGFPRKEGM--ERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPA-NTNA--------LILKE 143 (332)
Q Consensus 75 ~~~a~~~aDiVi~~ag~~~~~~~--~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~-~~~~--------~~~~~ 143 (332)
+.++++++|.|||+|+.....+. ....+...|+..+.++++++++..... ++|++|+.. .... ..+.+
T Consensus 122 l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~-r~V~~SS~~~~vyg~~~~~~~~~~i~E 200 (367)
T PLN02686 122 LHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVR-KCVFTSSLLACVWRQNYPHDLPPVIDE 200 (367)
T ss_pred HHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCcc-EEEEeccHHHhcccccCCCCCCcccCC
Confidence 67778899999999976432221 123456778999999999998752122 566666531 1000 00111
Q ss_pred HC-----CCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecC
Q 019990 144 FA-----PSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNH 188 (332)
Q Consensus 144 ~~-----~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~h 188 (332)
.. ...++...|+.+|+..+++...+++..|++...+|..+|||+.
T Consensus 201 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~ 250 (367)
T PLN02686 201 ESWSDESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPG 250 (367)
T ss_pred CCCCChhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCC
Confidence 00 0011223578899999999988889899999999999999984
No 79
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=99.15 E-value=8.8e-11 Score=105.35 Aligned_cols=174 Identities=13% Similarity=0.117 Sum_probs=114.4
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhh--hHhhhhh--hc-cCCccceEEeCCHHHHh
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNG--VKMELID--AA-FPLLKGVVATTDVVEAC 79 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~--~~~dl~~--~~-~~~~~~v~~~~~~~~a~ 79 (332)
.++|+||||+||||||.+.+|+..|+ +++.+|+..+. .+.. ....+.+ .. +....|+.+...+.+.+
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy-------~v~~vDNl~n~-~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF 73 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGY-------GVVIVDNLNNS-YLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLF 73 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCC-------cEEEEeccccc-chhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHH
Confidence 46899999999999999999999987 89999975421 1111 1111211 00 11224555545555555
Q ss_pred C--CCcEEEEecCCCCCC--CCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCCh---hhHHHHHHHHCCCCCCCc
Q 019990 80 K--DVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPA---NTNALILKEFAPSIPAKN 152 (332)
Q Consensus 80 ~--~aDiVi~~ag~~~~~--~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~---~~~~~~~~~~~~~~~~~~ 152 (332)
+ ..|-|+|.|+..... -..+..+...|+-++.++++.|+++. .. .++..|+.. +.+.-.+.+..+...|..
T Consensus 74 ~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~-~~-~~V~sssatvYG~p~~ip~te~~~t~~p~~ 151 (343)
T KOG1371|consen 74 SEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN-VK-ALVFSSSATVYGLPTKVPITEEDPTDQPTN 151 (343)
T ss_pred hhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC-Cc-eEEEecceeeecCcceeeccCcCCCCCCCC
Confidence 4 579999998764321 12335678889999999999999985 22 334444221 111111223222223666
Q ss_pred EEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecC
Q 019990 153 ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNH 188 (332)
Q Consensus 153 i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~h 188 (332)
.++-|+...+.+..-+...++.....+|.|+++|.|
T Consensus 152 pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~ 187 (343)
T KOG1371|consen 152 PYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAH 187 (343)
T ss_pred cchhhhHHHHHHHHhhhccccceEEEEEeccccCcc
Confidence 889999999999999999999999999999999954
No 80
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.14 E-value=2.9e-10 Score=104.55 Aligned_cols=174 Identities=14% Similarity=0.078 Sum_probs=110.9
Q ss_pred EEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh-cc-CCccceEEeCCHHHHhCC--C
Q 019990 7 RVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA-AF-PLLKGVVATTDVVEACKD--V 82 (332)
Q Consensus 7 kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~-~~-~~~~~v~~~~~~~~a~~~--a 82 (332)
+|+||||+|+||++++..|++.+. ..+|.++|........ ....++... .. ....|+....++.+++++ +
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~-----~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 74 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHP-----DAEVIVLDKLTYAGNL-ENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQP 74 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCC-----CCEEEEecCCCcchhh-hhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCC
Confidence 589999999999999999987652 0278888753210000 011111110 01 112355555566677776 8
Q ss_pred cEEEEecCCCCC--CCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChh-----hHHHHHHHHCCCCCCCcEEE
Q 019990 83 NIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPAN-----TNALILKEFAPSIPAKNITC 155 (332)
Q Consensus 83 DiVi~~ag~~~~--~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~-----~~~~~~~~~~~~~~~~~i~~ 155 (332)
|+|||+|+.... .......++..|+..+..+++++.+.. .+.+++.+|+..- ...+ ..+. ....+...|+
T Consensus 75 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~v~g~~~~~~~-~~e~-~~~~~~~~Y~ 151 (317)
T TIGR01181 75 DAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYW-HEFRFHHISTDEVYGDLEKGDA-FTET-TPLAPSSPYS 151 (317)
T ss_pred CEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCceEEEeeccceeCCCCCCCC-cCCC-CCCCCCCchH
Confidence 999999986421 112234567889999999999998864 3446666664210 0001 1111 2233445788
Q ss_pred eecccHHHHHHHHHHHcCCCCCCeeeeEEEecCC
Q 019990 156 LTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHS 189 (332)
Q Consensus 156 ~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg 189 (332)
.++...+++...+++..+++...+|...+||+..
T Consensus 152 ~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~ 185 (317)
T TIGR01181 152 ASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQ 185 (317)
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCC
Confidence 8999999998888889999999999999999753
No 81
>PLN02240 UDP-glucose 4-epimerase
Probab=99.13 E-value=2.1e-10 Score=107.55 Aligned_cols=177 Identities=15% Similarity=0.053 Sum_probs=109.4
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchh-hhhhhHhhhhh---hcc-CCccceEEeCCH
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAE-ALNGVKMELID---AAF-PLLKGVVATTDV 75 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~-~~~~~~~dl~~---~~~-~~~~~v~~~~~~ 75 (332)
|+..++||+||||+||+|++++..|++.+. +|+++|+..... .......+... ... ....|+....++
T Consensus 1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l 73 (352)
T PLN02240 1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGY-------KVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEAL 73 (352)
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHH
Confidence 667778999999999999999999998775 788888632110 00001111110 001 112345444445
Q ss_pred HHHhC--CCcEEEEecCCCCCC--CCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHH----HHHHHCCC
Q 019990 76 VEACK--DVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNAL----ILKEFAPS 147 (332)
Q Consensus 76 ~~a~~--~aDiVi~~ag~~~~~--~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~----~~~~~~~~ 147 (332)
.++++ ++|+|||+|+..... .......+..|+.....+++++++.+ . .+++++|+ ...... .+.+ ...
T Consensus 74 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~~v~~Ss-~~vyg~~~~~~~~E-~~~ 149 (352)
T PLN02240 74 EKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHG-C-KKLVFSSS-ATVYGQPEEVPCTE-EFP 149 (352)
T ss_pred HHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcC-C-CEEEEEcc-HHHhCCCCCCCCCC-CCC
Confidence 55554 689999999864211 12234567889999999999998764 2 25666664 221100 0111 122
Q ss_pred CCCCcEEEeecccHHHHHHHHHHH-cCCCCCCeeeeEEEecC
Q 019990 148 IPAKNITCLTRLDHNRAMGQISER-LKVHVSDVKNVIIWGNH 188 (332)
Q Consensus 148 ~~~~~i~~~t~l~~~r~~~~~a~~-~~v~~~~v~~~~V~G~h 188 (332)
+++...|+.++...+++...+++. .++....+|.++|||.|
T Consensus 150 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~ 191 (352)
T PLN02240 150 LSATNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAH 191 (352)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCC
Confidence 334446788888888887777654 57777788988888865
No 82
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.11 E-value=3.6e-10 Score=105.65 Aligned_cols=176 Identities=9% Similarity=-0.012 Sum_probs=108.5
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccch---hhhhhhHhhhhh--hcc-CCccceEEeCCHHH
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAA---EALNGVKMELID--AAF-PLLKGVVATTDVVE 77 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~---~~~~~~~~dl~~--~~~-~~~~~v~~~~~~~~ 77 (332)
++++|+||||+||||++++..|++.|. +|+++++.... +.+.....+... ... ....|+....++.+
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 77 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGY-------EVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRR 77 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCC-------EEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHH
Confidence 457899999999999999999999886 88888865321 011111000000 001 11234544444555
Q ss_pred HhCC--CcEEEEecCCCCCCC--CChhHHHhhhHHHHHHHHHHHHhhcCCC---cEEEEEeCChhhHHH---HHHHHCCC
Q 019990 78 ACKD--VNIAVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEKHAAPN---CKVLVVANPANTNAL---ILKEFAPS 147 (332)
Q Consensus 78 a~~~--aDiVi~~ag~~~~~~--~~~~~~~~~N~~~~~~i~~~i~~~~~~~---~~viv~snp~~~~~~---~~~~~~~~ 147 (332)
++++ .|+|||+|+...... ......+..|+.++.++++++.+++.+. .++|++|+ ..+... ...+ ...
T Consensus 78 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss-~~vyg~~~~~~~E-~~~ 155 (340)
T PLN02653 78 WLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGS-SEMYGSTPPPQSE-TTP 155 (340)
T ss_pred HHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEecc-HHHhCCCCCCCCC-CCC
Confidence 5654 699999998743211 1223356789999999999999875221 25555553 211100 0011 122
Q ss_pred CCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecC
Q 019990 148 IPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNH 188 (332)
Q Consensus 148 ~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~h 188 (332)
+.|...|+.+|...+++...+++.+++.....+.++++|++
T Consensus 156 ~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~ 196 (340)
T PLN02653 156 FHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPR 196 (340)
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCC
Confidence 34455799999999999888999888876666667777764
No 83
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.09 E-value=3.1e-11 Score=106.36 Aligned_cols=166 Identities=13% Similarity=0.181 Sum_probs=107.4
Q ss_pred EEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCC--cEE
Q 019990 8 VLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDV--NIA 85 (332)
Q Consensus 8 I~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~a--DiV 85 (332)
|+||||+||||++++..|++.+. +++.+......+ ... ....... ....++.....+.+.+++. |.|
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~-------~v~~~~~~~~~~-~~~--~~~~~~~-~~~~dl~~~~~~~~~~~~~~~d~v 69 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGH-------EVIVLSRSSNSE-SFE--EKKLNVE-FVIGDLTDKEQLEKLLEKANIDVV 69 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTT-------EEEEEESCSTGG-HHH--HHHTTEE-EEESETTSHHHHHHHHHHHTESEE
T ss_pred EEEEccCCHHHHHHHHHHHHcCC-------cccccccccccc-ccc--cccceEE-EEEeeccccccccccccccCceEE
Confidence 79999999999999999999886 555444433211 111 1000100 0112333334555666665 999
Q ss_pred EEecCCCCC--CCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHH----HHHHCCCCCCCcEEEeecc
Q 019990 86 VMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALI----LKEFAPSIPAKNITCLTRL 159 (332)
Q Consensus 86 i~~ag~~~~--~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~----~~~~~~~~~~~~i~~~t~l 159 (332)
||+|+.... ......+....|+...+++++++++.+ . .++++.|+ ....... +.+. +.+.+...|+.++.
T Consensus 70 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~-~~~i~~sS-~~~y~~~~~~~~~e~-~~~~~~~~Y~~~K~ 145 (236)
T PF01370_consen 70 IHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAG-V-KRFIFLSS-ASVYGDPDGEPIDED-SPINPLSPYGASKR 145 (236)
T ss_dssp EEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-T-SEEEEEEE-GGGGTSSSSSSBETT-SGCCHSSHHHHHHH
T ss_pred EEeecccccccccccccccccccccccccccccccccc-c-cccccccc-ccccccccccccccc-cccccccccccccc
Confidence 999987521 112345677889999999999999986 3 36676665 2211000 0000 11223335788899
Q ss_pred cHHHHHHHHHHHcCCCCCCeeeeEEEecC
Q 019990 160 DHNRAMGQISERLKVHVSDVKNVIIWGNH 188 (332)
Q Consensus 160 ~~~r~~~~~a~~~~v~~~~v~~~~V~G~h 188 (332)
..+++...++++.+++...+|...|||++
T Consensus 146 ~~e~~~~~~~~~~~~~~~~~R~~~vyG~~ 174 (236)
T PF01370_consen 146 AAEELLRDYAKKYGLRVTILRPPNVYGPG 174 (236)
T ss_dssp HHHHHHHHHHHHHTSEEEEEEESEEESTT
T ss_pred ccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999987
No 84
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.08 E-value=6.8e-10 Score=103.52 Aligned_cols=172 Identities=14% Similarity=0.070 Sum_probs=105.3
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccch-hhhhhhHhhhhhhcc-CCccceEEeCCHHHHhC--C
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAA-EALNGVKMELIDAAF-PLLKGVVATTDVVEACK--D 81 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~-~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~a~~--~ 81 (332)
|||+||||+||||++++..|++.+. +|+++++.... ........++.+... ....|+.....+.++++ +
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 73 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGH-------DVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHA 73 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCC-------eEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCC
Confidence 4799999999999999999998875 78888753211 000000111111101 01234443334445554 6
Q ss_pred CcEEEEecCCCCCC--CCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHH----HHHHHCCCC-CCCcEE
Q 019990 82 VNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNAL----ILKEFAPSI-PAKNIT 154 (332)
Q Consensus 82 aDiVi~~ag~~~~~--~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~----~~~~~~~~~-~~~~i~ 154 (332)
+|+|||+|+..... .....+.+..|+..+..+++++++.+ . .++|++|+ ...... .+.+. ... .|...|
T Consensus 74 ~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~~v~~Ss-~~~yg~~~~~~~~E~-~~~~~p~~~Y 149 (338)
T PRK10675 74 IDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-V-KNLIFSSS-ATVYGDQPKIPYVES-FPTGTPQSPY 149 (338)
T ss_pred CCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcC-C-CEEEEecc-HHhhCCCCCCccccc-cCCCCCCChh
Confidence 89999999864321 12234577889999999999998864 2 25666554 221100 01110 111 233467
Q ss_pred EeecccHHHHHHHHHHH-cCCCCCCeeeeEEEecC
Q 019990 155 CLTRLDHNRAMGQISER-LKVHVSDVKNVIIWGNH 188 (332)
Q Consensus 155 ~~t~l~~~r~~~~~a~~-~~v~~~~v~~~~V~G~h 188 (332)
+.++...+++...+++. .+++...+|.++|||+|
T Consensus 150 ~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~ 184 (338)
T PRK10675 150 GKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAH 184 (338)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCC
Confidence 88899888888877765 47888889988899976
No 85
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=99.07 E-value=3.1e-10 Score=105.07 Aligned_cols=168 Identities=15% Similarity=0.079 Sum_probs=109.9
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc-CCccceEEeCCHHHHhCCCcE
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF-PLLKGVVATTDVVEACKDVNI 84 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~a~~~aDi 84 (332)
|||+||||+||+|++++..|++.+. +|++++++.. ... ++.+... ....|+....++.++++++|+
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~-------~V~~~~r~~~--~~~----~~~~~~~~~~~~D~~~~~~l~~~~~~~d~ 67 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGE-------EVRVLVRPTS--DRR----NLEGLDVEIVEGDLRDPASLRKAVAGCRA 67 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCC-------EEEEEEecCc--ccc----ccccCCceEEEeeCCCHHHHHHHHhCCCE
Confidence 4799999999999999999998875 8999987532 111 1111101 112344444456677889999
Q ss_pred EEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHH----HHHHHHCCCCCCC---cEEEee
Q 019990 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNA----LILKEFAPSIPAK---NITCLT 157 (332)
Q Consensus 85 Vi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~----~~~~~~~~~~~~~---~i~~~t 157 (332)
|||+|+.......+..+.++.|+..+..+++++.+.+ . .++|++|+....-. ....+. ....+. ..|+.+
T Consensus 68 vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~~v~~SS~~~~~~~~~~~~~~e~-~~~~~~~~~~~Y~~s 144 (328)
T TIGR03466 68 LFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEAG-V-ERVVYTSSVATLGVRGDGTPADET-TPSSLDDMIGHYKRS 144 (328)
T ss_pred EEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHhC-C-CeEEEEechhhcCcCCCCCCcCcc-CCCCcccccChHHHH
Confidence 9999875322223345677889999999999998864 2 25666665311000 000110 111121 246677
Q ss_pred cccHHHHHHHHHHHcCCCCCCeeeeEEEecCC
Q 019990 158 RLDHNRAMGQISERLKVHVSDVKNVIIWGNHS 189 (332)
Q Consensus 158 ~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg 189 (332)
+...+++...+++..+++...+|...+||++.
T Consensus 145 K~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~ 176 (328)
T TIGR03466 145 KFLAEQAALEMAAEKGLPVVIVNPSTPIGPRD 176 (328)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCccCCCCC
Confidence 88888888888888899999999999999753
No 86
>PLN02778 3,5-epimerase/4-reductase
Probab=99.02 E-value=1.7e-09 Score=99.43 Aligned_cols=138 Identities=12% Similarity=0.020 Sum_probs=85.7
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHh--CCC
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEAC--KDV 82 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~--~~a 82 (332)
.|||+||||+||||++|+..|++.|+ +++....+. . |.. .+...+ .++
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~-------~V~~~~~~~-----~----~~~--------------~v~~~l~~~~~ 58 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGI-------DFHYGSGRL-----E----NRA--------------SLEADIDAVKP 58 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCC-------EEEEecCcc-----C----CHH--------------HHHHHHHhcCC
Confidence 47999999999999999999998875 665432210 0 000 011112 268
Q ss_pred cEEEEecCCCCCCC-----CChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEe-CChhh-HH--H-----HHHHHCCCC
Q 019990 83 NIAVMVGGFPRKEG-----MERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVA-NPANT-NA--L-----ILKEFAPSI 148 (332)
Q Consensus 83 DiVi~~ag~~~~~~-----~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~s-np~~~-~~--~-----~~~~~~~~~ 148 (332)
|+|||+|+....+. ....+.+..|+.++.++++++++++ . +++++| ..+-. .. + .+.+.....
T Consensus 59 D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g-v--~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~ 135 (298)
T PLN02778 59 THVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERG-L--VLTNYATGCIFEYDDAHPLGSGIGFKEEDTPN 135 (298)
T ss_pred CEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-C--CEEEEecceEeCCCCCCCcccCCCCCcCCCCC
Confidence 99999998643211 2335678899999999999999875 2 334443 22200 00 0 011111222
Q ss_pred CCCcEEEeecccHHHHHHHHHHHcCCC
Q 019990 149 PAKNITCLTRLDHNRAMGQISERLKVH 175 (332)
Q Consensus 149 ~~~~i~~~t~l~~~r~~~~~a~~~~v~ 175 (332)
++...|+.+|+..+++...+++.+++.
T Consensus 136 ~~~s~Yg~sK~~~E~~~~~y~~~~~lr 162 (298)
T PLN02778 136 FTGSFYSKTKAMVEELLKNYENVCTLR 162 (298)
T ss_pred CCCCchHHHHHHHHHHHHHhhccEEee
Confidence 334589999999999888777665544
No 87
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=98.93 E-value=3.1e-09 Score=97.50 Aligned_cols=152 Identities=14% Similarity=0.140 Sum_probs=97.6
Q ss_pred EEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhC--CCcEEE
Q 019990 9 LVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACK--DVNIAV 86 (332)
Q Consensus 9 ~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~--~aDiVi 86 (332)
+||||+||||++|+..|+..+. +++++.... . .|+ ....++.+.++ ++|+||
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~-------~v~~~~~~~-----~---~Dl-----------~~~~~l~~~~~~~~~d~Vi 54 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGF-------TNLVLRTHK-----E---LDL-----------TRQADVEAFFAKEKPTYVI 54 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCC-------cEEEeeccc-----c---CCC-----------CCHHHHHHHHhccCCCEEE
Confidence 5899999999999999988764 444443211 1 122 22233444444 579999
Q ss_pred EecCCCCC---CCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCC-h---hhHHHHHHHHC---CCCCCCc-EEE
Q 019990 87 MVGGFPRK---EGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANP-A---NTNALILKEFA---PSIPAKN-ITC 155 (332)
Q Consensus 87 ~~ag~~~~---~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp-~---~~~~~~~~~~~---~~~~~~~-i~~ 155 (332)
|+|+.... ......++++.|..++.++++++++.+ . .++|+.|+. + ....+ ..+.. ....|.. .|+
T Consensus 55 h~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~-~~~i~~SS~~vyg~~~~~~-~~E~~~~~~~~~p~~~~Y~ 131 (306)
T PLN02725 55 LAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHG-V-KKLLFLGSSCIYPKFAPQP-IPETALLTGPPEPTNEWYA 131 (306)
T ss_pred EeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcC-C-CeEEEeCceeecCCCCCCC-CCHHHhccCCCCCCcchHH
Confidence 99976321 112234577889999999999999874 2 256666542 1 00000 01100 0122222 488
Q ss_pred eecccHHHHHHHHHHHcCCCCCCeeeeEEEecCC
Q 019990 156 LTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHS 189 (332)
Q Consensus 156 ~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg 189 (332)
.+|...+++...+.+..+++...+|...|||++.
T Consensus 132 ~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~ 165 (306)
T PLN02725 132 IAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHD 165 (306)
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCC
Confidence 8899888888778888999999999999999853
No 88
>PRK09135 pteridine reductase; Provisional
Probab=98.93 E-value=6.1e-09 Score=92.43 Aligned_cols=153 Identities=12% Similarity=0.115 Sum_probs=92.8
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc---c-CCccceEEeCCHHHHh
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA---F-PLLKGVVATTDVVEAC 79 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~---~-~~~~~v~~~~~~~~a~ 79 (332)
+.++|+||||+|+||++++..|++.+. ++++++++.. +.......++.+.. . ....|++...++.+++
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-------~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 76 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY-------RVAIHYHRSA-AEADALAAELNALRPGSAAALQADLLDPDALPELV 76 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEcCCCH-HHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHH
Confidence 457899999999999999999998875 8888887532 22222222232210 0 1123444333333333
Q ss_pred C-------CCcEEEEecCCCCC--CC-CC---hhHHHhhhHHHHHHHHHHHHhhcC-CCcEEEEEeCChhhHHHHHHHHC
Q 019990 80 K-------DVNIAVMVGGFPRK--EG-ME---RKDVMSKNVSIYKAQASALEKHAA-PNCKVLVVANPANTNALILKEFA 145 (332)
Q Consensus 80 ~-------~aDiVi~~ag~~~~--~~-~~---~~~~~~~N~~~~~~i~~~i~~~~~-~~~~viv~snp~~~~~~~~~~~~ 145 (332)
+ ..|+|||+||.... .. .+ ..+.++.|+.....+++++..+-. ....++..++ .. ..
T Consensus 77 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~-~~-------~~- 147 (249)
T PRK09135 77 AACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITD-IH-------AE- 147 (249)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeC-hh-------hc-
Confidence 3 57999999986321 11 11 234677898888888888765421 1234443332 11 11
Q ss_pred CCCCCCcEEEeecccHHHHHHHHHHHcC
Q 019990 146 PSIPAKNITCLTRLDHNRAMGQISERLK 173 (332)
Q Consensus 146 ~~~~~~~i~~~t~l~~~r~~~~~a~~~~ 173 (332)
.+.++...|+.+|...+.+...+++.++
T Consensus 148 ~~~~~~~~Y~~sK~~~~~~~~~l~~~~~ 175 (249)
T PRK09135 148 RPLKGYPVYCAAKAALEMLTRSLALELA 175 (249)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHC
Confidence 2345556789999988888888888764
No 89
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=98.92 E-value=4e-09 Score=97.12 Aligned_cols=166 Identities=13% Similarity=0.140 Sum_probs=99.1
Q ss_pred EEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHh----CCCc
Q 019990 8 VLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEAC----KDVN 83 (332)
Q Consensus 8 I~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~----~~aD 83 (332)
|+||||+||||++++..|.+.+. .+|.++|.......+ ..+.. .....++.....+.... .++|
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~------~~v~~~~~~~~~~~~----~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~D 68 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGI------TDILVVDNLRDGHKF----LNLAD--LVIADYIDKEDFLDRLEKGAFGKIE 68 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCC------ceEEEEecCCCchhh----hhhhh--eeeeccCcchhHHHHHHhhccCCCC
Confidence 68999999999999999998774 157777764321111 11111 01112232222232222 4799
Q ss_pred EEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHH---HHHHHHCCCCCCCcEEEeeccc
Q 019990 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNA---LILKEFAPSIPAKNITCLTRLD 160 (332)
Q Consensus 84 iVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~---~~~~~~~~~~~~~~i~~~t~l~ 160 (332)
+|||+|+.......+....+..|+..+.++++++.+.+ .++|++|+. .+.. ....+..+...|...|+.++..
T Consensus 69 ~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~---~~~v~~SS~-~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~ 144 (314)
T TIGR02197 69 AIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKG---IPFIYASSA-ATYGDGEAGFREGRELERPLNVYGYSKFL 144 (314)
T ss_pred EEEECccccCccccchHHHHHHHHHHHHHHHHHHHHhC---CcEEEEccH-HhcCCCCCCcccccCcCCCCCHHHHHHHH
Confidence 99999986432222334567889999999999998874 356666652 1100 0001110111234467888887
Q ss_pred HHHHHHHHH-H-HcCCCCCCeeeeEEEecCC
Q 019990 161 HNRAMGQIS-E-RLKVHVSDVKNVIIWGNHS 189 (332)
Q Consensus 161 ~~r~~~~~a-~-~~~v~~~~v~~~~V~G~hg 189 (332)
.+++...+. + ..+++...+|...|||+..
T Consensus 145 ~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~ 175 (314)
T TIGR02197 145 FDQYVRRRVLPEALSAQVVGLRYFNVYGPRE 175 (314)
T ss_pred HHHHHHHHhHhhccCCceEEEEEeeccCCCC
Confidence 777765432 2 3467888899999999853
No 90
>PRK06194 hypothetical protein; Provisional
Probab=98.91 E-value=2e-08 Score=91.48 Aligned_cols=165 Identities=18% Similarity=0.116 Sum_probs=101.4
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHHhC
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEACK 80 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a~~ 80 (332)
++++|+||||+|+||++++..|++.|. +|+++|++. +.+.....++.... . .+..|++...++.++++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~ 75 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGM-------KLVLADVQQ--DALDRAVAELRAQGAEVLGVRTDVSDAAQVEALAD 75 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-------EEEEEeCCh--HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence 457899999999999999999998885 899999753 23333333332111 1 11234444444444433
Q ss_pred -------CCcEEEEecCCCCCC---CCChh---HHHhhhHHHHHHHHHH----HHhhcCC----CcEEEEEeCChhhHHH
Q 019990 81 -------DVNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKAQASA----LEKHAAP----NCKVLVVANPANTNAL 139 (332)
Q Consensus 81 -------~aDiVi~~ag~~~~~---~~~~~---~~~~~N~~~~~~i~~~----i~~~~~~----~~~viv~snp~~~~~~ 139 (332)
..|+|||.||..... ..+.. ..++.|+.....+.++ +.+.+.+ ..+++++|+....
T Consensus 76 ~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~--- 152 (287)
T PRK06194 76 AALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGL--- 152 (287)
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhc---
Confidence 479999999874321 12222 2466777666555444 4443311 1456666653221
Q ss_pred HHHHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEec
Q 019990 140 ILKEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGN 187 (332)
Q Consensus 140 ~~~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~ 187 (332)
.+.+....|+.++.....+...+++.++.....+|..+ +.+
T Consensus 153 ------~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~-v~p 193 (287)
T PRK06194 153 ------LAPPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASV-LCP 193 (287)
T ss_pred ------cCCCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEE-EEe
Confidence 12233447889999889999999998888878888654 454
No 91
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=98.91 E-value=3.3e-09 Score=96.50 Aligned_cols=148 Identities=16% Similarity=0.232 Sum_probs=94.7
Q ss_pred EEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCC--cE
Q 019990 7 RVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDV--NI 84 (332)
Q Consensus 7 kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~a--Di 84 (332)
||+||||+||||++++..|++.|+ +++.+++.. .|+. ...++.++++++ |+
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~-------~v~~~~r~~---------~d~~-----------~~~~~~~~~~~~~~d~ 53 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGR-------VVVALTSSQ---------LDLT-----------DPEALERLLRAIRPDA 53 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCC-------EEEEeCCcc---------cCCC-----------CHHHHHHHHHhCCCCE
Confidence 689999999999999999998875 888887631 1221 123455556655 99
Q ss_pred EEEecCCCCCC--CCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChh--h-HHHHHHHHCCCCCCCcEEEeecc
Q 019990 85 AVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPAN--T-NALILKEFAPSIPAKNITCLTRL 159 (332)
Q Consensus 85 Vi~~ag~~~~~--~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~--~-~~~~~~~~~~~~~~~~i~~~t~l 159 (332)
|||+|+..... .......+..|+..+.++++++++.+ .++|++|+..- . ....+.+. ....+...|+.++.
T Consensus 54 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~E~-~~~~~~~~Y~~~K~ 129 (287)
T TIGR01214 54 VVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHG---ARLVHISTDYVFDGEGKRPYRED-DATNPLNVYGQSKL 129 (287)
T ss_pred EEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHcC---CeEEEEeeeeeecCCCCCCCCCC-CCCCCcchhhHHHH
Confidence 99999864321 12234567889999999999998764 26666664210 0 00000110 11223335666777
Q ss_pred cHHHHHHHHHHHcCCCCCCeeeeEEEecCC
Q 019990 160 DHNRAMGQISERLKVHVSDVKNVIIWGNHS 189 (332)
Q Consensus 160 ~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg 189 (332)
..+++.. .++.+...+|...|||++.
T Consensus 130 ~~E~~~~----~~~~~~~ilR~~~v~G~~~ 155 (287)
T TIGR01214 130 AGEQAIR----AAGPNALIVRTSWLYGGGG 155 (287)
T ss_pred HHHHHHH----HhCCCeEEEEeeecccCCC
Confidence 6665443 3477888899988999864
No 92
>CHL00194 ycf39 Ycf39; Provisional
Probab=98.90 E-value=1e-08 Score=94.92 Aligned_cols=109 Identities=12% Similarity=0.042 Sum_probs=75.1
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc-CCccceEEeCCHHHHhCCCcE
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF-PLLKGVVATTDVVEACKDVNI 84 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~a~~~aDi 84 (332)
|||+||||+||||++++..|++.|+ +|+.++++.. ... .+.+... ....|+....++.++++++|+
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~-------~V~~l~R~~~--~~~----~l~~~~v~~v~~Dl~d~~~l~~al~g~d~ 67 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGY-------QVRCLVRNLR--KAS----FLKEWGAELVYGDLSLPETLPPSFKGVTA 67 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEEcChH--Hhh----hHhhcCCEEEECCCCCHHHHHHHHCCCCE
Confidence 4899999999999999999998886 8888887531 111 1111111 112455555667888999999
Q ss_pred EEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeC
Q 019990 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVAN 132 (332)
Q Consensus 85 Vi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~sn 132 (332)
|||+++.... ....+...|.....++++++++.+ .. ++|.+|.
T Consensus 68 Vi~~~~~~~~---~~~~~~~~~~~~~~~l~~aa~~~g-vk-r~I~~Ss 110 (317)
T CHL00194 68 IIDASTSRPS---DLYNAKQIDWDGKLALIEAAKAAK-IK-RFIFFSI 110 (317)
T ss_pred EEECCCCCCC---CccchhhhhHHHHHHHHHHHHHcC-CC-EEEEecc
Confidence 9998764321 123356678889999999999875 22 6666664
No 93
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=98.88 E-value=5.1e-09 Score=95.30 Aligned_cols=161 Identities=19% Similarity=0.205 Sum_probs=91.4
Q ss_pred EEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcEEEE
Q 019990 8 VLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVM 87 (332)
Q Consensus 8 I~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDiVi~ 87 (332)
|+||||+||||++++..|++.++ +|+.++++... ... +... ...++.. ....++++++|+|||
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~----~~~~---~~~~~~~-~~~~~~~~~~D~Vvh 63 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGH-------EVTILTRSPPA--GAN----TKWE---GYKPWAP-LAESEALEGADAVIN 63 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCC-------EEEEEeCCCCC--CCc----ccce---eeecccc-cchhhhcCCCCEEEE
Confidence 68999999999999999998875 89999875421 111 0000 0011111 334567889999999
Q ss_pred ecCCCCCCC----CChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHH----HHHHHHCCCCCCCcEEEeecc
Q 019990 88 VGGFPRKEG----MERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNA----LILKEFAPSIPAKNITCLTRL 159 (332)
Q Consensus 88 ~ag~~~~~~----~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~----~~~~~~~~~~~~~~i~~~t~l 159 (332)
+|+.+...+ ....++.+.|+..++++++++++++ ....+++.++.+.... ..+.+. ....+..+++-...
T Consensus 64 ~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~~i~~S~~~~yg~~~~~~~~E~-~~~~~~~~~~~~~~ 141 (292)
T TIGR01777 64 LAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAE-QKPKVFISASAVGYYGTSEDRVFTEE-DSPAGDDFLAELCR 141 (292)
T ss_pred CCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcC-CCceEEEEeeeEEEeCCCCCCCcCcc-cCCCCCChHHHHHH
Confidence 998753221 1224567789999999999999875 2223343332211000 001110 10111112111122
Q ss_pred cHHHHHHHHHHHcCCCCCCeeeeEEEecC
Q 019990 160 DHNRAMGQISERLKVHVSDVKNVIIWGNH 188 (332)
Q Consensus 160 ~~~r~~~~~a~~~~v~~~~v~~~~V~G~h 188 (332)
..++.... ++..+++...+|...|||+.
T Consensus 142 ~~e~~~~~-~~~~~~~~~ilR~~~v~G~~ 169 (292)
T TIGR01777 142 DWEEAAQA-AEDLGTRVVLLRTGIVLGPK 169 (292)
T ss_pred HHHHHhhh-chhcCCceEEEeeeeEECCC
Confidence 22222222 23457889999999999974
No 94
>PRK05865 hypothetical protein; Provisional
Probab=98.85 E-value=2.2e-08 Score=102.81 Aligned_cols=132 Identities=13% Similarity=0.140 Sum_probs=89.8
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcEE
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIA 85 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDiV 85 (332)
|||+||||+||||++++..|++.|+ +|+.+++... +... ... .....|+....++.++++++|+|
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~-------~Vv~l~R~~~-~~~~------~~v-~~v~gDL~D~~~l~~al~~vD~V 65 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGH-------EVVGIARHRP-DSWP------SSA-DFIAADIRDATAVESAMTGADVV 65 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcC-------EEEEEECCch-hhcc------cCc-eEEEeeCCCHHHHHHHHhCCCEE
Confidence 4799999999999999999998876 8888887431 1110 000 01123454445566778899999
Q ss_pred EEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCcEEEeecccHHHHH
Q 019990 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRAM 165 (332)
Q Consensus 86 i~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~i~~~t~l~~~r~~ 165 (332)
||+|+.... ....|+..+.++++++++.+ . .++|++|++. +...++
T Consensus 66 VHlAa~~~~-------~~~vNv~GT~nLLeAa~~~g-v-kr~V~iSS~~-----------------------K~aaE~-- 111 (854)
T PRK05865 66 AHCAWVRGR-------NDHINIDGTANVLKAMAETG-T-GRIVFTSSGH-----------------------QPRVEQ-- 111 (854)
T ss_pred EECCCcccc-------hHHHHHHHHHHHHHHHHHcC-C-CeEEEECCcH-----------------------HHHHHH--
Confidence 999975321 35778999999999999875 2 3677777642 111222
Q ss_pred HHHHHHcCCCCCCeeeeEEEecC
Q 019990 166 GQISERLKVHVSDVKNVIIWGNH 188 (332)
Q Consensus 166 ~~~a~~~~v~~~~v~~~~V~G~h 188 (332)
+.+.++++...+|.++|||++
T Consensus 112 --ll~~~gl~~vILRp~~VYGP~ 132 (854)
T PRK05865 112 --MLADCGLEWVAVRCALIFGRN 132 (854)
T ss_pred --HHHHcCCCEEEEEeceEeCCC
Confidence 223468888888888888874
No 95
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.83 E-value=1.2e-08 Score=103.80 Aligned_cols=169 Identities=14% Similarity=0.146 Sum_probs=99.1
Q ss_pred cEEEEEcCCChhHHHHHHHHHh--cccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc-CCccceEEe-----CCHHH
Q 019990 6 LRVLVTGAAGQIGYALVPMIAR--GIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF-PLLKGVVAT-----TDVVE 77 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~--~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~-----~~~~~ 77 (332)
|||+||||+||||++++..|++ .+. +|++++++.....+......+.+... ....|+... ....+
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~-------~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~ 73 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREA-------TVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIA 73 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCC-------EEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHH
Confidence 4799999999999999999984 443 88888875322222111100000000 112333321 11223
Q ss_pred HhCCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHH---HHHHHCC--CCCCCc
Q 019990 78 ACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNAL---ILKEFAP--SIPAKN 152 (332)
Q Consensus 78 a~~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~---~~~~~~~--~~~~~~ 152 (332)
.++++|+|||+|+.... ..+..+....|+..+.++++++.+.+ . .+++.+|+. .+... ...+... ..++..
T Consensus 74 ~l~~~D~Vih~Aa~~~~-~~~~~~~~~~nv~gt~~ll~~a~~~~-~-~~~v~~SS~-~v~g~~~~~~~e~~~~~~~~~~~ 149 (657)
T PRK07201 74 ELGDIDHVVHLAAIYDL-TADEEAQRAANVDGTRNVVELAERLQ-A-ATFHHVSSI-AVAGDYEGVFREDDFDEGQGLPT 149 (657)
T ss_pred HhcCCCEEEECceeecC-CCCHHHHHHHHhHHHHHHHHHHHhcC-C-CeEEEEecc-ccccCccCccccccchhhcCCCC
Confidence 34899999999986432 23345567889999999999999874 2 255666542 11100 0000000 011123
Q ss_pred EEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecC
Q 019990 153 ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNH 188 (332)
Q Consensus 153 i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~h 188 (332)
.|+.+|...+++.. +..+++...+|..+|||++
T Consensus 150 ~Y~~sK~~~E~~~~---~~~g~~~~ilRp~~v~G~~ 182 (657)
T PRK07201 150 PYHRTKFEAEKLVR---EECGLPWRVYRPAVVVGDS 182 (657)
T ss_pred chHHHHHHHHHHHH---HcCCCcEEEEcCCeeeecC
Confidence 46777877777643 3468888999999999964
No 96
>PLN02996 fatty acyl-CoA reductase
Probab=98.80 E-value=2.2e-08 Score=98.06 Aligned_cols=185 Identities=16% Similarity=0.117 Sum_probs=106.1
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhh-hhHhhhhhh--------------------c
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALN-GVKMELIDA--------------------A 62 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~-~~~~dl~~~--------------------~ 62 (332)
+.+.|+||||+||+|++++..|+..+. +..+|+++.+....+... ....++... .
T Consensus 10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~----~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~k 85 (491)
T PLN02996 10 ENKTILVTGATGFLAKIFVEKILRVQP----NVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEK 85 (491)
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhhCC----CCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcC
Confidence 457899999999999999999886421 012676666543211111 000011000 0
Q ss_pred -cCCccceEEe-------CCHHHHhCCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCC-
Q 019990 63 -FPLLKGVVAT-------TDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANP- 133 (332)
Q Consensus 63 -~~~~~~v~~~-------~~~~~a~~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp- 133 (332)
.+..+|+... ..+.+.++++|+|||+|+..... .+..+....|+.++.++++.+++..... +++.+|+.
T Consensus 86 v~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~k-~~V~vST~~ 163 (491)
T PLN02996 86 VTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFD-ERYDVALGINTLGALNVLNFAKKCVKVK-MLLHVSTAY 163 (491)
T ss_pred EEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCc-CCHHHHHHHHHHHHHHHHHHHHhcCCCC-eEEEEeeeE
Confidence 0112344311 11334567899999999865422 3445677889999999999998753122 45555522
Q ss_pred hh-------------------------hH----------HHHHHH---------------HCC--CCCCCcEEEeecccH
Q 019990 134 AN-------------------------TN----------ALILKE---------------FAP--SIPAKNITCLTRLDH 161 (332)
Q Consensus 134 ~~-------------------------~~----------~~~~~~---------------~~~--~~~~~~i~~~t~l~~ 161 (332)
+. .- .....+ ..+ ..+..+.|+.||..+
T Consensus 164 vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~a 243 (491)
T PLN02996 164 VCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMG 243 (491)
T ss_pred EecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHH
Confidence 10 00 000000 000 011124699999999
Q ss_pred HHHHHHHHHHcCCCCCCeeeeEEEecCCCceeeccc
Q 019990 162 NRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVN 197 (332)
Q Consensus 162 ~r~~~~~a~~~~v~~~~v~~~~V~G~hg~~~v~~~s 197 (332)
+++...+++ +++...+|+++|+|+.. .-+|-|-
T Consensus 244 E~lv~~~~~--~lpv~i~RP~~V~G~~~-~p~~gwi 276 (491)
T PLN02996 244 EMLLGNFKE--NLPLVIIRPTMITSTYK-EPFPGWI 276 (491)
T ss_pred HHHHHHhcC--CCCEEEECCCEeccCCc-CCCCCcc
Confidence 998876654 89999999999999753 3345553
No 97
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=98.80 E-value=1.5e-08 Score=93.61 Aligned_cols=169 Identities=14% Similarity=0.094 Sum_probs=103.9
Q ss_pred EEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh-cc-CCccceEEeCCHHHHhC--CC
Q 019990 7 RVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA-AF-PLLKGVVATTDVVEACK--DV 82 (332)
Q Consensus 7 kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~-~~-~~~~~v~~~~~~~~a~~--~a 82 (332)
||+||||+|+||++++..|++.+. +++++|..... ... ....+... .. ....++....++.++++ +.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~-------~V~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 71 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGH-------EVVVLDNLSNG-SPE-ALKRGERITRVTFVEGDLRDRELLDRLFEEHKI 71 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCC-------eEEEEeCCCcc-chh-hhhhhccccceEEEECCCCCHHHHHHHHHhCCC
Confidence 689999999999999999998775 77788753211 000 00111110 00 01124443344555554 68
Q ss_pred cEEEEecCCCCCC--CCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHH----HHHHHHCCCCCCCcEEEe
Q 019990 83 NIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNA----LILKEFAPSIPAKNITCL 156 (332)
Q Consensus 83 DiVi~~ag~~~~~--~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~----~~~~~~~~~~~~~~i~~~ 156 (332)
|+|||+||..... .....+.+..|+.....+++++.+++ . .+++++|. ..... ..+.+ .....+...|+.
T Consensus 72 d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~~v~~ss-~~~~g~~~~~~~~e-~~~~~~~~~y~~ 147 (328)
T TIGR01179 72 DAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTG-V-KKFIFSSS-AAVYGEPSSIPISE-DSPLGPINPYGR 147 (328)
T ss_pred cEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcC-C-CEEEEecc-hhhcCCCCCCCccc-cCCCCCCCchHH
Confidence 9999999864321 11233457789999999999998864 2 25555553 11100 00011 012233346788
Q ss_pred ecccHHHHHHHHHHH-cCCCCCCeeeeEEEecC
Q 019990 157 TRLDHNRAMGQISER-LKVHVSDVKNVIIWGNH 188 (332)
Q Consensus 157 t~l~~~r~~~~~a~~-~~v~~~~v~~~~V~G~h 188 (332)
++...+++...+++. .+++...+|.+.+||++
T Consensus 148 sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~ 180 (328)
T TIGR01179 148 SKLMSERILRDLSKADPGLSYVILRYFNVAGAD 180 (328)
T ss_pred HHHHHHHHHHHHHHhccCCCEEEEecCcccCCC
Confidence 888888887777777 79999999998899975
No 98
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=98.75 E-value=6e-08 Score=86.79 Aligned_cols=153 Identities=18% Similarity=0.132 Sum_probs=91.3
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHh---
Q 019990 3 KNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEAC--- 79 (332)
Q Consensus 3 ~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~--- 79 (332)
.+.++|+||||+|+||.+++..|++.|. +++++|++. +.+.....++.........|+....++.+++
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 74 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGA-------RVVIADIKP--ARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAA 74 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEcCCH--HHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHH
Confidence 3457899999999999999999999886 899999754 2232222222111111123444333333333
Q ss_pred ----CCCcEEEEecCCCCC-C--CCCh---hHHHhhhHHHHHHHHHHHHhhc---CCCcEEEEEeCChhhHHHHHHHHCC
Q 019990 80 ----KDVNIAVMVGGFPRK-E--GMER---KDVMSKNVSIYKAQASALEKHA---APNCKVLVVANPANTNALILKEFAP 146 (332)
Q Consensus 80 ----~~aDiVi~~ag~~~~-~--~~~~---~~~~~~N~~~~~~i~~~i~~~~---~~~~~viv~snp~~~~~~~~~~~~~ 146 (332)
...|++||+||.... + ..+. ...+..|+.....+.+++..+. ...++++++|+.... .
T Consensus 75 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~---------~ 145 (257)
T PRK07067 75 VERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGR---------R 145 (257)
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhC---------C
Confidence 368999999986421 1 1121 2346778877777777765431 123466766653211 1
Q ss_pred CCCCCcEEEeecccHHHHHHHHHHHcC
Q 019990 147 SIPAKNITCLTRLDHNRAMGQISERLK 173 (332)
Q Consensus 147 ~~~~~~i~~~t~l~~~r~~~~~a~~~~ 173 (332)
+.++...|+.++.....+...+++.+.
T Consensus 146 ~~~~~~~Y~~sK~a~~~~~~~la~e~~ 172 (257)
T PRK07067 146 GEALVSHYCATKAAVISYTQSAALALI 172 (257)
T ss_pred CCCCCchhhhhHHHHHHHHHHHHHHhc
Confidence 234444678888877777777777653
No 99
>PRK06180 short chain dehydrogenase; Provisional
Probab=98.75 E-value=8.1e-08 Score=87.13 Aligned_cols=151 Identities=13% Similarity=0.084 Sum_probs=86.6
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhC---
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACK--- 80 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~--- 80 (332)
.+++|+||||+|+||++++..|++.|. +|++++++. +.+................|+....++.++++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-------~V~~~~r~~--~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~ 73 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-------RVVGTVRSE--AARADFEALHPDRALARLLDVTDFDAIDAVVADAE 73 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-------EEEEEeCCH--HHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHH
Confidence 456899999999999999999998875 899999753 22221111000000011123333333333332
Q ss_pred ----CCcEEEEecCCCCC---CCCChh---HHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHHHCCCC
Q 019990 81 ----DVNIAVMVGGFPRK---EGMERK---DVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKEFAPSI 148 (332)
Q Consensus 81 ----~aDiVi~~ag~~~~---~~~~~~---~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~~~~~~ 148 (332)
..|+|||+||.... ...+.. ..+..|+.....+.+++..+. ....++|++|+-... .+.
T Consensus 74 ~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~---------~~~ 144 (277)
T PRK06180 74 ATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGL---------ITM 144 (277)
T ss_pred HHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEeccccc---------CCC
Confidence 58999999987421 112222 346788887777777654321 123466777653211 123
Q ss_pred CCCcEEEeecccHHHHHHHHHHHc
Q 019990 149 PAKNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 149 ~~~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
++...|+.++.....+...+++.+
T Consensus 145 ~~~~~Y~~sK~a~~~~~~~la~e~ 168 (277)
T PRK06180 145 PGIGYYCGSKFALEGISESLAKEV 168 (277)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHh
Confidence 444467777776666666666654
No 100
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.74 E-value=6.4e-08 Score=86.64 Aligned_cols=156 Identities=19% Similarity=0.161 Sum_probs=89.1
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc---CCccceEEeCCHHHHh--
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF---PLLKGVVATTDVVEAC-- 79 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~---~~~~~v~~~~~~~~a~-- 79 (332)
+++++||||+|+||++++..|++.|. +|++++++.. .......++.+... ....|+.....+.+++
T Consensus 7 ~~~vlItGasg~iG~~la~~l~~~G~-------~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 77 (262)
T PRK13394 7 GKTAVVTGAASGIGKEIALELARAGA-------AVAIADLNQD--GANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDK 77 (262)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-------eEEEEeCChH--HHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHH
Confidence 57899999999999999999999886 7888887642 22222222322110 0123443333333332
Q ss_pred -----CCCcEEEEecCCCCCC---CCC---hhHHHhhhHHH----HHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHH
Q 019990 80 -----KDVNIAVMVGGFPRKE---GME---RKDVMSKNVSI----YKAQASALEKHAAPNCKVLVVANPANTNALILKEF 144 (332)
Q Consensus 80 -----~~aDiVi~~ag~~~~~---~~~---~~~~~~~N~~~----~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~ 144 (332)
...|+|||++|..... ..+ ....+..|+.. ++.+++.+.+.. +..+++++|+ ... .
T Consensus 78 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~~~~iv~~ss-~~~------~- 148 (262)
T PRK13394 78 VAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDD-RGGVVIYMGS-VHS------H- 148 (262)
T ss_pred HHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhc-CCcEEEEEcc-hhh------c-
Confidence 3489999999874211 111 12345567766 566677763322 2346666664 211 0
Q ss_pred CCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 145 APSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 145 ~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.++.....+.+.+++.+. +..++.
T Consensus 149 -~~~~~~~~y~~sk~a~~~~~~~la~~~~--~~~i~v 182 (262)
T PRK13394 149 -EASPLKSAYVTAKHGLLGLARVLAKEGA--KHNVRS 182 (262)
T ss_pred -CCCCCCcccHHHHHHHHHHHHHHHHHhh--hcCeEE
Confidence 1233344677777776667667776642 334553
No 101
>PRK06482 short chain dehydrogenase; Provisional
Probab=98.74 E-value=5.7e-08 Score=87.97 Aligned_cols=149 Identities=13% Similarity=0.148 Sum_probs=86.5
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHH-------
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEA------- 78 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a------- 78 (332)
++|+||||+|+||++++..|++.+. ++.+++++. +.+................|++...++.++
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 73 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-------RVAATVRRP--DALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAA 73 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 5799999999999999999998875 788888753 222211111110000011234333333332
Q ss_pred hCCCcEEEEecCCCCCCC---CCh---hHHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHHHCCCCCC
Q 019990 79 CKDVNIAVMVGGFPRKEG---MER---KDVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKEFAPSIPA 150 (332)
Q Consensus 79 ~~~aDiVi~~ag~~~~~~---~~~---~~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~~~~~~~~ 150 (332)
+.+.|+|||+||...... .+. ...+..|+.....+++++..+. ....++|++|+-... .+.|.
T Consensus 74 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~---------~~~~~ 144 (276)
T PRK06482 74 LGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQ---------IAYPG 144 (276)
T ss_pred cCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccc---------cCCCC
Confidence 245799999998753211 122 2356678888888888763321 122466666652211 12344
Q ss_pred CcEEEeecccHHHHHHHHHHHc
Q 019990 151 KNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 151 ~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
...|+.++.....+...+++.+
T Consensus 145 ~~~Y~~sK~a~~~~~~~l~~~~ 166 (276)
T PRK06482 145 FSLYHATKWGIEGFVEAVAQEV 166 (276)
T ss_pred CchhHHHHHHHHHHHHHHHHHh
Confidence 4467888887777777777664
No 102
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.70 E-value=9.4e-08 Score=97.45 Aligned_cols=144 Identities=11% Similarity=0.073 Sum_probs=87.8
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEE--EecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHh--
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHM--LDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEAC-- 79 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l--~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~-- 79 (332)
..|||+||||+||||++|+..|...++ ++.. .|+. |. ..+...+
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~-------~v~~~~~~l~-----------d~--------------~~v~~~i~~ 426 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGI-------AYEYGKGRLE-----------DR--------------SSLLADIRN 426 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCC-------eEEeeccccc-----------cH--------------HHHHHHHHh
Confidence 357999999999999999999988764 4421 1111 00 0111222
Q ss_pred CCCcEEEEecCCCCCC-----CCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeC-Ch-hh--------HHHHHHHH
Q 019990 80 KDVNIAVMVGGFPRKE-----GMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVAN-PA-NT--------NALILKEF 144 (332)
Q Consensus 80 ~~aDiVi~~ag~~~~~-----~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~sn-p~-~~--------~~~~~~~~ 144 (332)
.+.|+|||+|+....+ .....+.+..|+.++.++++++++++ ++++++|+ .+ +. -.+ +.+.
T Consensus 427 ~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g---~~~v~~Ss~~v~~~~~~~~~~~~~p-~~E~ 502 (668)
T PLN02260 427 VKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENG---LLMMNFATGCIFEYDAKHPEGSGIG-FKEE 502 (668)
T ss_pred hCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcC---CeEEEEcccceecCCcccccccCCC-CCcC
Confidence 2689999999864221 12334567889999999999999975 34455543 22 00 001 1111
Q ss_pred CCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecC
Q 019990 145 APSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNH 188 (332)
Q Consensus 145 ~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~h 188 (332)
....++...|+.+|+..+++...+++. ..+|...+||.+
T Consensus 503 ~~~~~~~~~Yg~sK~~~E~~~~~~~~~-----~~~r~~~~~~~~ 541 (668)
T PLN02260 503 DKPNFTGSFYSKTKAMVEELLREYDNV-----CTLRVRMPISSD 541 (668)
T ss_pred CCCCCCCChhhHHHHHHHHHHHhhhhh-----eEEEEEEecccC
Confidence 111233457999999999987766533 335555667643
No 103
>PRK07806 short chain dehydrogenase; Provisional
Probab=98.69 E-value=1.3e-07 Score=84.08 Aligned_cols=170 Identities=16% Similarity=0.152 Sum_probs=97.3
Q ss_pred CCC-CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHH
Q 019990 1 MAK-NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVV 76 (332)
Q Consensus 1 m~~-~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~ 76 (332)
|++ +.++++||||+|+||++++..|++.|. +|++++++.. +.+.....++.... . ....|++...++.
T Consensus 1 ~~~~~~k~vlItGasggiG~~l~~~l~~~G~-------~V~~~~r~~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~ 72 (248)
T PRK07806 1 MGDLPGKTALVTGSSRGIGADTAKILAGAGA-------HVVVNYRQKA-PRANKVVAEIEAAGGRASAVGADLTDEESVA 72 (248)
T ss_pred CCCCCCcEEEEECCCCcHHHHHHHHHHHCCC-------EEEEEeCCch-HhHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence 543 347899999999999999999998875 7888776432 12222222222110 0 1123444333333
Q ss_pred HHh-------CCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCC
Q 019990 77 EAC-------KDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIP 149 (332)
Q Consensus 77 ~a~-------~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~ 149 (332)
+++ .+.|+|||.||.......+....+..|......+++.+.++.....+++++|+.... + .... ...+
T Consensus 73 ~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~--~-~~~~-~~~~ 148 (248)
T PRK07806 73 ALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAH--F-IPTV-KTMP 148 (248)
T ss_pred HHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhh--c-Cccc-cCCc
Confidence 332 368999999976422222223456778888888888888764233566766653210 0 0000 1122
Q ss_pred CCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEE
Q 019990 150 AKNITCLTRLDHNRAMGQISERLKVHVSDVKNVII 184 (332)
Q Consensus 150 ~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V 184 (332)
....|+.+|...+.+.+.++..+. +..++...|
T Consensus 149 ~~~~Y~~sK~a~e~~~~~l~~~~~--~~~i~v~~v 181 (248)
T PRK07806 149 EYEPVARSKRAGEDALRALRPELA--EKGIGFVVV 181 (248)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhh--ccCeEEEEe
Confidence 222467788888888777776654 455775444
No 104
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=98.69 E-value=1.2e-07 Score=85.15 Aligned_cols=153 Identities=14% Similarity=0.180 Sum_probs=99.4
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhC--CCc
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACK--DVN 83 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~--~aD 83 (332)
|||+|||++|.+|+.|...|. .+. ++...|... +|+. ....+.+.++ ..|
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~-------~v~a~~~~~---------~Dit-----------d~~~v~~~i~~~~PD 52 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEF-------EVIATDRAE---------LDIT-----------DPDAVLEVIRETRPD 52 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCc-------eEEeccCcc---------cccc-----------ChHHHHHHHHhhCCC
Confidence 359999999999999999887 333 677777532 2332 2233455555 469
Q ss_pred EEEEecCCCC--CCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeC-Ch-hhHHHHHHHHCCCCCCCcEEEeecc
Q 019990 84 IAVMVGGFPR--KEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVAN-PA-NTNALILKEFAPSIPAKNITCLTRL 159 (332)
Q Consensus 84 iVi~~ag~~~--~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~sn-p~-~~~~~~~~~~~~~~~~~~i~~~t~l 159 (332)
+|||+|++.. +...+++.-+..|.....++++++++.+ +++|.+|. -+ |-...-.++..-.-+|-.+||-||+
T Consensus 53 vVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g---a~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl 129 (281)
T COG1091 53 VVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVG---ARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKL 129 (281)
T ss_pred EEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhC---CeEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHH
Confidence 9999998753 2333445557889999999999999986 46666663 22 1000000111111345568999999
Q ss_pred cHHHHHHHHHHHcCCCCCCeeeeEEEecCCCcee
Q 019990 160 DHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQY 193 (332)
Q Consensus 160 ~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg~~~v 193 (332)
..+.+.... +-+.-.+|..-|||++|.+.+
T Consensus 130 ~GE~~v~~~----~~~~~I~Rtswv~g~~g~nFv 159 (281)
T COG1091 130 AGEEAVRAA----GPRHLILRTSWVYGEYGNNFV 159 (281)
T ss_pred HHHHHHHHh----CCCEEEEEeeeeecCCCCCHH
Confidence 888765443 445556787778999986555
No 105
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=98.68 E-value=1.4e-07 Score=92.57 Aligned_cols=118 Identities=11% Similarity=0.064 Sum_probs=77.4
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh-----------cc-CCccceEE
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA-----------AF-PLLKGVVA 71 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~-----------~~-~~~~~v~~ 71 (332)
+.+.|+||||+|+||++++..|++.|+ +|++++++. +.+.....++... .. ....|+..
T Consensus 79 ~gKvVLVTGATGgIG~aLAr~LLk~G~-------~Vval~Rn~--ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD 149 (576)
T PLN03209 79 DEDLAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRSA--QRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEK 149 (576)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHhhhhccccccccccCceEEEEecCCC
Confidence 456799999999999999999998886 788888753 2232222112110 00 11234444
Q ss_pred eCCHHHHhCCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeC
Q 019990 72 TTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVAN 132 (332)
Q Consensus 72 ~~~~~~a~~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~sn 132 (332)
..++.+++.++|+||+++|............+..|..++.++++++.+.+ . .+||++|.
T Consensus 150 ~esI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~ag-V-gRIV~VSS 208 (576)
T PLN03209 150 PDQIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAK-V-NHFILVTS 208 (576)
T ss_pred HHHHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhC-C-CEEEEEcc
Confidence 44566678999999999986532211222346678889999999998764 2 36677665
No 106
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.68 E-value=1.4e-07 Score=83.40 Aligned_cols=154 Identities=19% Similarity=0.150 Sum_probs=87.0
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHH
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVE 77 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~ 77 (332)
|++++++|+||||+|++|++++..|++.|. +|.+++++.. .......++.... . ....|+....++.+
T Consensus 1 ~~~~~~~ilItGasg~iG~~l~~~l~~~g~-------~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 71 (246)
T PRK05653 1 MSLQGKTALVTGASRGIGRAIALRLAADGA-------KVVIYDSNEE--AAEALAAELRAAGGEARVLVFDVSDEAAVRA 71 (246)
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCChh--HHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence 666678999999999999999999998876 7888887542 2222222222111 0 01123333222333
Q ss_pred Hh-------CCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHH
Q 019990 78 AC-------KDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILK 142 (332)
Q Consensus 78 a~-------~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~ 142 (332)
++ ...|+|||++|..... ..+. ...+..|+.....+.+.+..+- ....+++++|.....
T Consensus 72 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~------ 145 (246)
T PRK05653 72 LIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGV------ 145 (246)
T ss_pred HHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhc------
Confidence 33 3469999999763211 1122 2345677777777766664321 112356666642110
Q ss_pred HHCCCCCCCcEEEeecccHHHHHHHHHHHc
Q 019990 143 EFAPSIPAKNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 143 ~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
.+.++...|+.++.....+...+++.+
T Consensus 146 ---~~~~~~~~y~~sk~~~~~~~~~l~~~~ 172 (246)
T PRK05653 146 ---TGNPGQTNYSAAKAGVIGFTKALALEL 172 (246)
T ss_pred ---cCCCCCcHhHhHHHHHHHHHHHHHHHH
Confidence 122333345667766667777777664
No 107
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=98.68 E-value=1.7e-07 Score=83.71 Aligned_cols=157 Identities=18% Similarity=0.182 Sum_probs=91.4
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHHh--
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEAC-- 79 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a~-- 79 (332)
.++|+||||+|+||++++..|++.|. +|++.+++. +.+......+.+.. . .+..|+....++.+++
T Consensus 10 ~k~vlItGa~g~iG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~ 80 (255)
T PRK07523 10 GRRALVTGSSQGIGYALAEGLAQAGA-------EVILNGRDP--AKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDA 80 (255)
T ss_pred CCEEEEECCcchHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHH
Confidence 46899999999999999999998886 889998764 22332222232210 0 1112443333333333
Q ss_pred -----CCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHHHCC
Q 019990 80 -----KDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKEFAP 146 (332)
Q Consensus 80 -----~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~~~~ 146 (332)
...|+|||.+|..... ..+. ...+..|+.....+.+.+.++. ....+++++|+.... .
T Consensus 81 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~---------~ 151 (255)
T PRK07523 81 FEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSA---------L 151 (255)
T ss_pred HHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhc---------c
Confidence 3579999999874211 1121 2345678777777777666542 123466777653221 1
Q ss_pred CCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 147 SIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 147 ~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
+.+....|+.++.....+.+.++..+. +..++.
T Consensus 152 ~~~~~~~y~~sK~a~~~~~~~~a~e~~--~~gi~v 184 (255)
T PRK07523 152 ARPGIAPYTATKGAVGNLTKGMATDWA--KHGLQC 184 (255)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHhh--HhCeEE
Confidence 223333577788777777777776553 234553
No 108
>PRK06500 short chain dehydrogenase; Provisional
Probab=98.67 E-value=1.2e-07 Score=84.30 Aligned_cols=151 Identities=14% Similarity=0.142 Sum_probs=87.3
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCH-------H
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDV-------V 76 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~-------~ 76 (332)
+.++|+||||+|+||++++..|++.|. ++++++++. +.+.....++.........|+....+. .
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-------RVAITGRDP--ASLEAARAELGESALVIRADAGDVAAQKALAQALA 75 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEecCCH--HHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHH
Confidence 346899999999999999999998875 788888753 222211111110000011122211111 1
Q ss_pred HHhCCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCC
Q 019990 77 EACKDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPA 150 (332)
Q Consensus 77 ~a~~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~ 150 (332)
+.+...|+|||.||..... ..+. ...+..|+.....+.+++..+-....++++.++.... .+.+.
T Consensus 76 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~---------~~~~~ 146 (249)
T PRK06500 76 EAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAH---------IGMPN 146 (249)
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhc---------cCCCC
Confidence 2234689999999864321 1122 2356788888888888887542122355555543211 12333
Q ss_pred CcEEEeecccHHHHHHHHHHHc
Q 019990 151 KNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 151 ~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
...|+.++.....+.+.+++.+
T Consensus 147 ~~~Y~~sK~a~~~~~~~la~e~ 168 (249)
T PRK06500 147 SSVYAASKAALLSLAKTLSGEL 168 (249)
T ss_pred ccHHHHHHHHHHHHHHHHHHHh
Confidence 3467778877777777777765
No 109
>PRK06138 short chain dehydrogenase; Provisional
Probab=98.66 E-value=1e-07 Score=84.78 Aligned_cols=152 Identities=16% Similarity=0.104 Sum_probs=87.3
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhh-hhcc-CCccceEEeCCHHHH
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELI-DAAF-PLLKGVVATTDVVEA 78 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~-~~~~-~~~~~v~~~~~~~~a 78 (332)
|..+.++++||||+|+||++++..|++.|. ++.+++++. +.......++. .... ....|+....++.++
T Consensus 1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 71 (252)
T PRK06138 1 MRLAGRVAIVTGAGSGIGRATAKLFAREGA-------RVVVADRDA--EAAERVAAAIAAGGRAFARQGDVGSAEAVEAL 71 (252)
T ss_pred CCCCCcEEEEeCCCchHHHHHHHHHHHCCC-------eEEEecCCH--HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence 666678999999999999999999998875 788888753 22222222221 0000 112344433333333
Q ss_pred h-------CCCcEEEEecCCCCCC---CCChh---HHHhhhHHHHHHHHH----HHHhhcCCCcEEEEEeCChhhHHHHH
Q 019990 79 C-------KDVNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKAQAS----ALEKHAAPNCKVLVVANPANTNALIL 141 (332)
Q Consensus 79 ~-------~~aDiVi~~ag~~~~~---~~~~~---~~~~~N~~~~~~i~~----~i~~~~~~~~~viv~snp~~~~~~~~ 141 (332)
+ .+.|+|||.+|..... ..+.+ ..+..|......+.+ .+++.. ..+++++|+....
T Consensus 72 ~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~ii~~sS~~~~----- 144 (252)
T PRK06138 72 VDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG--GGSIVNTASQLAL----- 144 (252)
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC--CeEEEEECChhhc-----
Confidence 3 3689999999864211 12222 235667665544444 444432 3456666642111
Q ss_pred HHHCCCCCCCcEEEeecccHHHHHHHHHHHc
Q 019990 142 KEFAPSIPAKNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 142 ~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
.+.+....|+.++.....+...+++.+
T Consensus 145 ----~~~~~~~~Y~~sK~a~~~~~~~l~~~~ 171 (252)
T PRK06138 145 ----AGGRGRAAYVASKGAIASLTRAMALDH 171 (252)
T ss_pred ----cCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 122333456777877777777777765
No 110
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.65 E-value=2.6e-07 Score=82.10 Aligned_cols=161 Identities=17% Similarity=0.142 Sum_probs=90.2
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh-cc-CCccceEEeCCHHHH
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA-AF-PLLKGVVATTDVVEA 78 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~-~~-~~~~~v~~~~~~~~a 78 (332)
|..+.++|+||||+|++|++++..|++.|. +|.+++++.. .......++.+. .. ....|+....++.++
T Consensus 1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~-------~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 71 (251)
T PRK07231 1 MRLEGKVAIVTGASSGIGEGIARRFAAEGA-------RVVVTDRNEE--AAERVAAEILAGGRAIAVAADVSDEADVEAA 71 (251)
T ss_pred CCcCCcEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCHH--HHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 666678999999999999999999998876 7999998642 222222222210 00 112344433333333
Q ss_pred h-------CCCcEEEEecCCCCCC----CCCh---hHHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHH
Q 019990 79 C-------KDVNIAVMVGGFPRKE----GMER---KDVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILK 142 (332)
Q Consensus 79 ~-------~~aDiVi~~ag~~~~~----~~~~---~~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~ 142 (332)
+ ...|+|||.+|..... ..+. .+.+..|......+.+.+..+. .....++++|+....
T Consensus 72 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~------ 145 (251)
T PRK07231 72 VAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGL------ 145 (251)
T ss_pred HHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhc------
Confidence 3 3579999999863211 1111 2345667765555555444321 123456666652110
Q ss_pred HHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 143 EFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 143 ~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.++.....+...+++.++ +..++.
T Consensus 146 ---~~~~~~~~y~~sk~~~~~~~~~~a~~~~--~~~i~v 179 (251)
T PRK07231 146 ---RPRPGLGWYNASKGAVITLTKALAAELG--PDKIRV 179 (251)
T ss_pred ---CCCCCchHHHHHHHHHHHHHHHHHHHhh--hhCeEE
Confidence 1223333456677666666777777654 334553
No 111
>PRK12746 short chain dehydrogenase; Provisional
Probab=98.64 E-value=8.1e-07 Score=79.23 Aligned_cols=156 Identities=14% Similarity=0.108 Sum_probs=89.4
Q ss_pred CCC-CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh--cc-CCccceEEeCCHH
Q 019990 1 MAK-NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA--AF-PLLKGVVATTDVV 76 (332)
Q Consensus 1 m~~-~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~--~~-~~~~~v~~~~~~~ 76 (332)
|.+ +.++|+||||+|+||++++..|++.|. ++.+...+. .+.+.....++... .. .+..|+....++.
T Consensus 1 ~~~~~~~~ilItGasg~iG~~la~~l~~~G~-------~v~i~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~ 72 (254)
T PRK12746 1 MKNLDGKVALVTGASRGIGRAIAMRLANDGA-------LVAIHYGRN-KQAADETIREIESNGGKAFLIEADLNSIDGVK 72 (254)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEcCCC-HHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHH
Confidence 543 347899999999999999999998875 666643222 12222222222211 01 1123444433333
Q ss_pred HHhC-------------CCcEEEEecCCCCCCC---CCh---hHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhH
Q 019990 77 EACK-------------DVNIAVMVGGFPRKEG---MER---KDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTN 137 (332)
Q Consensus 77 ~a~~-------------~aDiVi~~ag~~~~~~---~~~---~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~ 137 (332)
++++ +.|+|||+||...... .+. ...++.|+.....+++.+.++.....+++++|+....
T Consensus 73 ~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~- 151 (254)
T PRK12746 73 KLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVR- 151 (254)
T ss_pred HHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhc-
Confidence 3333 5899999998743211 122 2345678888777777777653223466666653210
Q ss_pred HHHHHHHCCCCCCCcEEEeecccHHHHHHHHHHHcC
Q 019990 138 ALILKEFAPSIPAKNITCLTRLDHNRAMGQISERLK 173 (332)
Q Consensus 138 ~~~~~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~ 173 (332)
.+.+....|+.++.....+...+++.++
T Consensus 152 --------~~~~~~~~Y~~sK~a~~~~~~~~~~~~~ 179 (254)
T PRK12746 152 --------LGFTGSIAYGLSKGALNTMTLPLAKHLG 179 (254)
T ss_pred --------CCCCCCcchHhhHHHHHHHHHHHHHHHh
Confidence 1233334578888877777777777654
No 112
>PRK07890 short chain dehydrogenase; Provisional
Probab=98.62 E-value=2e-07 Score=83.35 Aligned_cols=166 Identities=16% Similarity=0.094 Sum_probs=95.1
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHH
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVE 77 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~ 77 (332)
|-...++|+||||+|+||++++..|++.|. +|.+++++. +.+.....++.... . ....|++...++..
T Consensus 1 ~~l~~k~vlItGa~~~IG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 71 (258)
T PRK07890 1 MLLKGKVVVVSGVGPGLGRTLAVRAARAGA-------DVVLAARTA--ERLDEVAAEIDDLGRRALAVPTDITDEDQCAN 71 (258)
T ss_pred CccCCCEEEEECCCCcHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHHhCCceEEEecCCCCHHHHHH
Confidence 445668899999999999999999999886 899999754 22332223332111 0 11234433333322
Q ss_pred H-------hCCCcEEEEecCCCCC--C--CCCh---hHHHhhhHHHHHHHHHHHHhhcC-CCcEEEEEeCChhhHHHHHH
Q 019990 78 A-------CKDVNIAVMVGGFPRK--E--GMER---KDVMSKNVSIYKAQASALEKHAA-PNCKVLVVANPANTNALILK 142 (332)
Q Consensus 78 a-------~~~aDiVi~~ag~~~~--~--~~~~---~~~~~~N~~~~~~i~~~i~~~~~-~~~~viv~snp~~~~~~~~~ 142 (332)
+ +...|+|||.||.... + ..+. ...+..|+.....+.+++..+-. ...++|++|+...
T Consensus 72 ~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~------- 144 (258)
T PRK07890 72 LVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVL------- 144 (258)
T ss_pred HHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhh-------
Confidence 2 2467999999986321 1 1222 23466787777777777765321 1236666665321
Q ss_pred HHCCCCCCCcEEEeecccHHHHHHHHHHHc---CCCCCCeeeeEE
Q 019990 143 EFAPSIPAKNITCLTRLDHNRAMGQISERL---KVHVSDVKNVII 184 (332)
Q Consensus 143 ~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~---~v~~~~v~~~~V 184 (332)
. .+.+....|+.++.....+...+++.+ ++....+++..+
T Consensus 145 ~--~~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v 187 (258)
T PRK07890 145 R--HSQPKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYI 187 (258)
T ss_pred c--cCCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCcc
Confidence 1 123334456777776666777777654 444444443333
No 113
>PRK07774 short chain dehydrogenase; Provisional
Probab=98.62 E-value=2.5e-07 Score=82.21 Aligned_cols=156 Identities=19% Similarity=0.153 Sum_probs=91.7
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHH-
Q 019990 3 KNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEA- 78 (332)
Q Consensus 3 ~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a- 78 (332)
.+.++++||||+|+||++++..|++.|. ++++++++.. .......++.+.. . ....|++...++.+.
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~-------~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 74 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREGA-------SVVVADINAE--GAERVAKQIVADGGTAIAVQVDVSDPDSAKAMA 74 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCHH--HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence 3567899999999999999999998875 8999997532 2222222222110 0 112344333333222
Q ss_pred ------hCCCcEEEEecCCCCC------CCCCh---hHHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHH
Q 019990 79 ------CKDVNIAVMVGGFPRK------EGMER---KDVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALIL 141 (332)
Q Consensus 79 ------~~~aDiVi~~ag~~~~------~~~~~---~~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~ 141 (332)
+...|+|||+||.... ...+. .+.+..|......+.+++..+. .+..+++++|+-.
T Consensus 75 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~------- 147 (250)
T PRK07774 75 DATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTA------- 147 (250)
T ss_pred HHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEeccc-------
Confidence 2368999999986321 11121 2345678777777666666542 1234667666421
Q ss_pred HHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 142 KEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 142 ~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+++...|+.++.....+...+++.+. ...++.
T Consensus 148 -----~~~~~~~Y~~sK~a~~~~~~~l~~~~~--~~~i~v 180 (250)
T PRK07774 148 -----AWLYSNFYGLAKVGLNGLTQQLARELG--GMNIRV 180 (250)
T ss_pred -----ccCCccccHHHHHHHHHHHHHHHHHhC--ccCeEE
Confidence 123334578888877888888887764 234554
No 114
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=98.61 E-value=1.3e-08 Score=93.01 Aligned_cols=159 Identities=14% Similarity=0.181 Sum_probs=90.5
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhC--CCc
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACK--DVN 83 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~--~aD 83 (332)
|||+||||+|++|+++...|...++ ++..++... .|+.+. ..+.+.++ +.|
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~-------~v~~~~r~~---------~dl~d~-----------~~~~~~~~~~~pd 53 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGY-------EVIATSRSD---------LDLTDP-----------EAVAKLLEAFKPD 53 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSE-------EEEEESTTC---------S-TTSH-----------HHHHHHHHHH--S
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCC-------EEEEeCchh---------cCCCCH-----------HHHHHHHHHhCCC
Confidence 6899999999999999999988765 777776531 122211 11222222 589
Q ss_pred EEEEecCCCCCC--CCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCC-hh-hH-HHHHHHHCCCCCCCcEEEeec
Q 019990 84 IAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANP-AN-TN-ALILKEFAPSIPAKNITCLTR 158 (332)
Q Consensus 84 iVi~~ag~~~~~--~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp-~~-~~-~~~~~~~~~~~~~~~i~~~t~ 158 (332)
+|||+|+..... +.....-...|+.....+++.+.+.+ .++|.+|+- |- -. .....+. ...+|...||-++
T Consensus 54 ~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~---~~li~~STd~VFdG~~~~~y~E~-d~~~P~~~YG~~K 129 (286)
T PF04321_consen 54 VVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERG---ARLIHISTDYVFDGDKGGPYTED-DPPNPLNVYGRSK 129 (286)
T ss_dssp EEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT----EEEEEEEGGGS-SSTSSSB-TT-S----SSHHHHHH
T ss_pred eEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcC---CcEEEeeccEEEcCCcccccccC-CCCCCCCHHHHHH
Confidence 999999874311 12234466789999999999999864 566666641 20 00 0001111 1233445788899
Q ss_pred ccHHHHHHHHHHHcCCCCCCeeeeEEEecCCCceeecccCc
Q 019990 159 LDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHA 199 (332)
Q Consensus 159 l~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg~~~v~~~s~~ 199 (332)
+..+++.... .-+...+|...+||+++.+.+-.+-+.
T Consensus 130 ~~~E~~v~~~----~~~~~IlR~~~~~g~~~~~~~~~~~~~ 166 (286)
T PF04321_consen 130 LEGEQAVRAA----CPNALILRTSWVYGPSGRNFLRWLLRR 166 (286)
T ss_dssp HHHHHHHHHH-----SSEEEEEE-SEESSSSSSHHHHHHHH
T ss_pred HHHHHHHHHh----cCCEEEEecceecccCCCchhhhHHHH
Confidence 8887765442 225666888778999776655444333
No 115
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.61 E-value=2.5e-07 Score=82.58 Aligned_cols=156 Identities=15% Similarity=0.114 Sum_probs=87.0
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh--cc-CCccceEEeCCHHHHh-
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA--AF-PLLKGVVATTDVVEAC- 79 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~--~~-~~~~~v~~~~~~~~a~- 79 (332)
..++|+||||+|++|++++..|++.|. ++++++++.. .+.....++... .. .+..|+....++.+++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-------~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 73 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-------KVVIADLNDE--AAAAAAEALQKAGGKAIGVAMDVTDEEAINAGID 73 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------eEEEEeCCHH--HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence 457899999999999999999998875 8999988642 233222333211 11 1123444333333333
Q ss_pred ------CCCcEEEEecCCCCCC---CCCh---hHHHhhhHHH----HHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHH
Q 019990 80 ------KDVNIAVMVGGFPRKE---GMER---KDVMSKNVSI----YKAQASALEKHAAPNCKVLVVANPANTNALILKE 143 (332)
Q Consensus 80 ------~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~----~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~ 143 (332)
.+.|+|||.||..... ..+. .+.+..|+.. ++.+.+.+++.. ..+++++|+....
T Consensus 74 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~iv~iss~~~~------- 144 (258)
T PRK12429 74 YAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG--GGRIINMASVHGL------- 144 (258)
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC--CeEEEEEcchhhc-------
Confidence 3689999999864221 1121 1244566665 555566665543 3366666653211
Q ss_pred HCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 144 FAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 144 ~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.++.....+.+.+++.+. +..++.
T Consensus 145 --~~~~~~~~y~~~k~a~~~~~~~l~~~~~--~~~i~v 178 (258)
T PRK12429 145 --VGSAGKAAYVSAKHGLIGLTKVVALEGA--THGVTV 178 (258)
T ss_pred --cCCCCcchhHHHHHHHHHHHHHHHHHhc--ccCeEE
Confidence 1223333456666555666666666542 344553
No 116
>PRK06128 oxidoreductase; Provisional
Probab=98.60 E-value=3.8e-07 Score=83.82 Aligned_cols=153 Identities=14% Similarity=0.099 Sum_probs=89.8
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc---cCCccceEEeCCHHHH---
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA---FPLLKGVVATTDVVEA--- 78 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~---~~~~~~v~~~~~~~~a--- 78 (332)
.++|+||||+|+||++++..|++.|. +|++.++.............+.... ..+..|+....++.++
T Consensus 55 ~k~vlITGas~gIG~~~a~~l~~~G~-------~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~ 127 (300)
T PRK06128 55 GRKALITGADSGIGRATAIAFAREGA-------DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVER 127 (300)
T ss_pred CCEEEEecCCCcHHHHHHHHHHHcCC-------EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHH
Confidence 46899999999999999999998875 7777665322111222222222111 0112344433333332
Q ss_pred ----hCCCcEEEEecCCCC--CC--CCCh---hHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCC
Q 019990 79 ----CKDVNIAVMVGGFPR--KE--GMER---KDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPS 147 (332)
Q Consensus 79 ----~~~aDiVi~~ag~~~--~~--~~~~---~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~ 147 (332)
+...|++||.||... .+ ..+. ...++.|+.....+++.+..+-.+..++|++|+.... .+
T Consensus 128 ~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~---------~~ 198 (300)
T PRK06128 128 AVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSY---------QP 198 (300)
T ss_pred HHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCcccc---------CC
Confidence 336899999998632 11 1122 2357788888888888887653234566666653211 11
Q ss_pred CCCCcEEEeecccHHHHHHHHHHHcC
Q 019990 148 IPAKNITCLTRLDHNRAMGQISERLK 173 (332)
Q Consensus 148 ~~~~~i~~~t~l~~~r~~~~~a~~~~ 173 (332)
.+..-.|+.+|.....+.+.+++.+.
T Consensus 199 ~~~~~~Y~asK~a~~~~~~~la~el~ 224 (300)
T PRK06128 199 SPTLLDYASTKAAIVAFTKALAKQVA 224 (300)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHhh
Confidence 12222467788877888888887753
No 117
>PRK08278 short chain dehydrogenase; Provisional
Probab=98.58 E-value=1e-06 Score=79.76 Aligned_cols=164 Identities=18% Similarity=0.188 Sum_probs=96.8
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchh-----hhhhhHhhhhhhc--c-CCccceEEe
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAE-----ALNGVKMELIDAA--F-PLLKGVVAT 72 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~-----~~~~~~~dl~~~~--~-~~~~~v~~~ 72 (332)
|+.++++++||||+|+||++++..|++.|. +|++++++.... .+.....++.... . .+..|++..
T Consensus 2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~ 74 (273)
T PRK08278 2 MSLSGKTLFITGASRGIGLAIALRAARDGA-------NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDE 74 (273)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCH
Confidence 334567899999999999999999998875 788888754210 0111122222110 0 112344433
Q ss_pred CCHHHHh-------CCCcEEEEecCCCCC---CCCChh---HHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhH
Q 019990 73 TDVVEAC-------KDVNIAVMVGGFPRK---EGMERK---DVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTN 137 (332)
Q Consensus 73 ~~~~~a~-------~~aDiVi~~ag~~~~---~~~~~~---~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~ 137 (332)
.++.+.+ ...|++||.||.... ...+.. ..++.|+.....+.+.+..+- ...+.+++++.+...
T Consensus 75 ~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~- 153 (273)
T PRK08278 75 DQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNL- 153 (273)
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhc-
Confidence 3333333 268999999986321 112222 245677776766666665431 123566666653211
Q ss_pred HHHHHHHCCC-CCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 138 ALILKEFAPS-IPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 138 ~~~~~~~~~~-~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
. +. ++....|+.+|...+++...+++.++ +..|+.
T Consensus 154 -----~--~~~~~~~~~Y~~sK~a~~~~~~~la~el~--~~~I~v 189 (273)
T PRK08278 154 -----D--PKWFAPHTAYTMAKYGMSLCTLGLAEEFR--DDGIAV 189 (273)
T ss_pred -----c--ccccCCcchhHHHHHHHHHHHHHHHHHhh--hcCcEE
Confidence 0 11 24445789999999999999988876 345664
No 118
>PRK05717 oxidoreductase; Validated
Probab=98.58 E-value=3.1e-07 Score=82.14 Aligned_cols=151 Identities=16% Similarity=0.111 Sum_probs=90.6
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHH------
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEA------ 78 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a------ 78 (332)
.++|+||||+|+||++++..|++.|. ++.++|++.. .......++.........|+....++.++
T Consensus 10 ~k~vlItG~sg~IG~~~a~~l~~~g~-------~v~~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 80 (255)
T PRK05717 10 GRVALVTGAARGIGLGIAAWLIAEGW-------QVVLADLDRE--RGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLG 80 (255)
T ss_pred CCEEEEeCCcchHHHHHHHHHHHcCC-------EEEEEcCCHH--HHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 46899999999999999999998875 7899987531 12111111111000112344433333222
Q ss_pred -hCCCcEEEEecCCCCCC-----CCCh---hHHHhhhHHHHHHHHHHHHhhc-CCCcEEEEEeCChhhHHHHHHHHCCCC
Q 019990 79 -CKDVNIAVMVGGFPRKE-----GMER---KDVMSKNVSIYKAQASALEKHA-APNCKVLVVANPANTNALILKEFAPSI 148 (332)
Q Consensus 79 -~~~aDiVi~~ag~~~~~-----~~~~---~~~~~~N~~~~~~i~~~i~~~~-~~~~~viv~snp~~~~~~~~~~~~~~~ 148 (332)
+...|++||.||..... ..+. ...+..|+.....+.+++..+- .....+|++|+.... .+.
T Consensus 81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~---------~~~ 151 (255)
T PRK05717 81 QFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRAR---------QSE 151 (255)
T ss_pred HhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhc---------CCC
Confidence 23579999999874321 1121 2456788888888888876531 123466666653211 122
Q ss_pred CCCcEEEeecccHHHHHHHHHHHcC
Q 019990 149 PAKNITCLTRLDHNRAMGQISERLK 173 (332)
Q Consensus 149 ~~~~i~~~t~l~~~r~~~~~a~~~~ 173 (332)
+....|+.+|.....+...+++.++
T Consensus 152 ~~~~~Y~~sKaa~~~~~~~la~~~~ 176 (255)
T PRK05717 152 PDTEAYAASKGGLLALTHALAISLG 176 (255)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhc
Confidence 2233678888888888888888876
No 119
>PRK05875 short chain dehydrogenase; Provisional
Probab=98.56 E-value=8.5e-07 Score=80.20 Aligned_cols=164 Identities=14% Similarity=0.067 Sum_probs=95.2
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh----cc-CCccceEEeCCHHH
Q 019990 3 KNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA----AF-PLLKGVVATTDVVE 77 (332)
Q Consensus 3 ~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~----~~-~~~~~v~~~~~~~~ 77 (332)
.+.++|+||||+|+||++++..|++.|. +|.+++++. +.+.....++... .. ....|+....++.+
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~ 75 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAAGA-------AVMIVGRNP--DKLAAAAEEIEALKGAGAVRYEPADVTDEDQVAR 75 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHH
Confidence 3458999999999999999999999886 789998753 2232222232211 00 01124433333333
Q ss_pred HhC-------CCcEEEEecCCCCC--C--CCCh---hHHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHH
Q 019990 78 ACK-------DVNIAVMVGGFPRK--E--GMER---KDVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALIL 141 (332)
Q Consensus 78 a~~-------~aDiVi~~ag~~~~--~--~~~~---~~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~ 141 (332)
.++ ..|++||.||.... + ..+. ...+..|......+++++.++. ....+++++|+...
T Consensus 76 ~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~------ 149 (276)
T PRK05875 76 AVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAA------ 149 (276)
T ss_pred HHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhh------
Confidence 333 68999999985321 1 1222 2245567777766666554432 12346666665321
Q ss_pred HHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEec
Q 019990 142 KEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGN 187 (332)
Q Consensus 142 ~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~ 187 (332)
. .+.++...|+.++...+.+...+++.++ +..++.. ++.+
T Consensus 150 -~--~~~~~~~~Y~~sK~a~~~~~~~~~~~~~--~~~i~v~-~i~P 189 (276)
T PRK05875 150 -S--NTHRWFGAYGVTKSAVDHLMKLAADELG--PSWVRVN-SIRP 189 (276)
T ss_pred -c--CCCCCCcchHHHHHHHHHHHHHHHHHhc--ccCeEEE-EEec
Confidence 0 1223334678888888888888887765 4567743 3444
No 120
>PRK12829 short chain dehydrogenase; Provisional
Probab=98.56 E-value=5.3e-07 Score=80.78 Aligned_cols=151 Identities=19% Similarity=0.206 Sum_probs=84.7
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc-cCCccceEEeCCHHHH----
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA-FPLLKGVVATTDVVEA---- 78 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~-~~~~~~v~~~~~~~~a---- 78 (332)
+.++++||||+|+||++++..|++.+. +|++++++.. .......+..... .....|+....++.++
T Consensus 10 ~~~~vlItGa~g~iG~~~a~~L~~~g~-------~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (264)
T PRK12829 10 DGLRVLVTGGASGIGRAIAEAFAEAGA-------RVHVCDVSEA--ALAATAARLPGAKVTATVADVADPAQVERVFDTA 80 (264)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-------EEEEEeCCHH--HHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHH
Confidence 457999999999999999999998876 7899987531 2221111111110 0011233332233222
Q ss_pred ---hCCCcEEEEecCCCCCC----CCCh---hHHHhhhHHHHHHHHHHHHhhc--CCC-cEEEEEeCChhhHHHHHHHHC
Q 019990 79 ---CKDVNIAVMVGGFPRKE----GMER---KDVMSKNVSIYKAQASALEKHA--APN-CKVLVVANPANTNALILKEFA 145 (332)
Q Consensus 79 ---~~~aDiVi~~ag~~~~~----~~~~---~~~~~~N~~~~~~i~~~i~~~~--~~~-~~viv~snp~~~~~~~~~~~~ 145 (332)
+.++|+|||.+|..... ..+. ...++.|......+.+.+...- ... .++++.|.....
T Consensus 81 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~--------- 151 (264)
T PRK12829 81 VERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGR--------- 151 (264)
T ss_pred HHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccc---------
Confidence 24789999999864211 1122 2345667777666666553321 112 344554432110
Q ss_pred CCCCCCcEEEeecccHHHHHHHHHHHc
Q 019990 146 PSIPAKNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 146 ~~~~~~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
.+++....|+.++.....+...+++.+
T Consensus 152 ~~~~~~~~y~~~K~a~~~~~~~l~~~~ 178 (264)
T PRK12829 152 LGYPGRTPYAASKWAVVGLVKSLAIEL 178 (264)
T ss_pred cCCCCCchhHHHHHHHHHHHHHHHHHH
Confidence 133444457777777777777777765
No 121
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=98.56 E-value=3.8e-07 Score=81.67 Aligned_cols=145 Identities=16% Similarity=0.087 Sum_probs=82.8
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHH---
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEA--- 78 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a--- 78 (332)
.++++||||+|+||++++..|++.|. +|+++|++.. ......++.... . ....|+....++.+.
T Consensus 8 ~k~vlVtGas~gIG~~la~~l~~~G~-------~v~~~~r~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 77 (260)
T PRK12823 8 GKVVVVTGAAQGIGRGVALRAAAEGA-------RVVLVDRSEL---VHEVAAELRAAGGEALALTADLETYAGAQAAMAA 77 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCchH---HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHH
Confidence 46899999999999999999998885 7889987531 111222222110 0 111233332222222
Q ss_pred ----hCCCcEEEEecCCCC--CC--CCChh---HHHhhhHHHH----HHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHH
Q 019990 79 ----CKDVNIAVMVGGFPR--KE--GMERK---DVMSKNVSIY----KAQASALEKHAAPNCKVLVVANPANTNALILKE 143 (332)
Q Consensus 79 ----~~~aDiVi~~ag~~~--~~--~~~~~---~~~~~N~~~~----~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~ 143 (332)
+...|++||.||... .+ ..+.. ..+..|+... +.+++.+++.+ ..+++++|+... +
T Consensus 78 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~~sS~~~---~---- 148 (260)
T PRK12823 78 AVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG--GGAIVNVSSIAT---R---- 148 (260)
T ss_pred HHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CCeEEEEcCccc---c----
Confidence 236899999998531 11 12222 2345555433 45555555442 246666665321 0
Q ss_pred HCCCCCCCcEEEeecccHHHHHHHHHHHc
Q 019990 144 FAPSIPAKNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 144 ~~~~~~~~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
+ +....|+.+|.....+.+.+++.+
T Consensus 149 ---~-~~~~~Y~~sK~a~~~~~~~la~e~ 173 (260)
T PRK12823 149 ---G-INRVPYSAAKGGVNALTASLAFEY 173 (260)
T ss_pred ---C-CCCCccHHHHHHHHHHHHHHHHHh
Confidence 0 112257888888888888888876
No 122
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.56 E-value=2.4e-06 Score=74.53 Aligned_cols=161 Identities=17% Similarity=0.172 Sum_probs=104.7
Q ss_pred CCC-CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhh-hccCCccceEEeCC----
Q 019990 1 MAK-NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELID-AAFPLLKGVVATTD---- 74 (332)
Q Consensus 1 m~~-~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~-~~~~~~~~v~~~~~---- 74 (332)
|++ +.+-++||||++.||.+++..|.+.|. .++|..++. ++++....++.+ ...+...|+++..+
T Consensus 1 m~~~~~kv~lITGASSGiG~A~A~~l~~~G~-------~vvl~aRR~--drL~~la~~~~~~~~~~~~~DVtD~~~~~~~ 71 (246)
T COG4221 1 MTTLKGKVALITGASSGIGEATARALAEAGA-------KVVLAARRE--ERLEALADEIGAGAALALALDVTDRAAVEAA 71 (246)
T ss_pred CCCCCCcEEEEecCcchHHHHHHHHHHHCCC-------eEEEEeccH--HHHHHHHHhhccCceEEEeeccCCHHHHHHH
Confidence 443 345688999999999999999999986 899999875 567766666653 11223346655433
Q ss_pred ---HHHHhCCCcEEEEecCCCCCCC---CC---hhHHHhhhHHHHH----HHHHHHHhhcCCCcEEEEEeCChhhHHHHH
Q 019990 75 ---VVEACKDVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYK----AQASALEKHAAPNCKVLVVANPANTNALIL 141 (332)
Q Consensus 75 ---~~~a~~~aDiVi~~ag~~~~~~---~~---~~~~~~~N~~~~~----~i~~~i~~~~~~~~~viv~snp~~~~~~~~ 141 (332)
+.+.+...|++|+-||...... .+ -..+++.|+.++. .++..+.+. ..+.+|+.++-..
T Consensus 72 i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r--~~G~IiN~~SiAG------ 143 (246)
T COG4221 72 IEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVER--KSGHIINLGSIAG------ 143 (246)
T ss_pred HHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhc--CCceEEEeccccc------
Confidence 2333557999999999743211 11 1346788887664 445555554 2457787776322
Q ss_pred HHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeE
Q 019990 142 KEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVI 183 (332)
Q Consensus 142 ~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~ 183 (332)
+ ..||...+|+.||-.-.-|...+.+.+. .+.||...
T Consensus 144 -~--~~y~~~~vY~ATK~aV~~fs~~LR~e~~--g~~IRVt~ 180 (246)
T COG4221 144 -R--YPYPGGAVYGATKAAVRAFSLGLRQELA--GTGIRVTV 180 (246)
T ss_pred -c--ccCCCCccchhhHHHHHHHHHHHHHHhc--CCCeeEEE
Confidence 1 2477778999998766666555544432 46777654
No 123
>PRK12937 short chain dehydrogenase; Provisional
Probab=98.55 E-value=7.6e-07 Score=78.83 Aligned_cols=162 Identities=13% Similarity=0.139 Sum_probs=93.6
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHH
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVE 77 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~ 77 (332)
|..+.++|+||||+|+||++++..|++.|. +++++..+.. ........++.... . ....|+....++.+
T Consensus 1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~-------~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~ 72 (245)
T PRK12937 1 MTLSNKVAIVTGASRGIGAAIARRLAADGF-------AVAVNYAGSA-AAADELVAEIEAAGGRAIAVQADVADAAAVTR 72 (245)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEecCCCH-HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence 666778999999999999999999999885 6766665321 12222222222111 0 11124433333444
Q ss_pred HhC-------CCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHH
Q 019990 78 ACK-------DVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEF 144 (332)
Q Consensus 78 a~~-------~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~ 144 (332)
+++ +.|+|||.||..... ..+. ...+..|+.....+++.+.+...+..+++++|+....
T Consensus 73 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~-------- 144 (245)
T PRK12937 73 LFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIA-------- 144 (245)
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecccc--------
Confidence 433 689999999864211 1122 2345677777777776665543234466666643211
Q ss_pred CCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 145 APSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 145 ~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.++.....+...+++.++ +..++.
T Consensus 145 -~~~~~~~~Y~~sK~a~~~~~~~~a~~~~--~~~i~v 178 (245)
T PRK12937 145 -LPLPGYGPYAASKAAVEGLVHVLANELR--GRGITV 178 (245)
T ss_pred -CCCCCCchhHHHHHHHHHHHHHHHHHhh--hcCeEE
Confidence 1234444677888777777777777654 334553
No 124
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.55 E-value=8.2e-07 Score=79.03 Aligned_cols=162 Identities=14% Similarity=0.061 Sum_probs=92.2
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhC
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACK 80 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~ 80 (332)
|+.+.++|+||||+|+||++++..|++.|. ++.+.+.+.. +.+.....++.........|+....++.++++
T Consensus 1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~-------~vv~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 72 (253)
T PRK08642 1 MQISEQTVLVTGGSRGLGAAIARAFAREGA-------RVVVNYHQSE-DAAEALADELGDRAIALQADVTDREQVQAMFA 72 (253)
T ss_pred CCCCCCEEEEeCCCCcHHHHHHHHHHHCCC-------eEEEEcCCCH-HHHHHHHHHhCCceEEEEcCCCCHHHHHHHHH
Confidence 666678999999999999999999998875 6766554321 12221111111000011124433333333332
Q ss_pred -------C-CcEEEEecCCCC-------C--CCCCh---hHHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHH
Q 019990 81 -------D-VNIAVMVGGFPR-------K--EGMER---KDVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNA 138 (332)
Q Consensus 81 -------~-aDiVi~~ag~~~-------~--~~~~~---~~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~ 138 (332)
. .|++||.||... . ...+. .+.+..|......+.+.+..+- ...+.++++++....
T Consensus 73 ~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-- 150 (253)
T PRK08642 73 TATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQ-- 150 (253)
T ss_pred HHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCcccc--
Confidence 2 899999997521 1 01121 2346677776666666654321 123566766653210
Q ss_pred HHHHHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 139 LILKEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 139 ~~~~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
...++...|+.+|.....+.+.+++.++ +..++.
T Consensus 151 -------~~~~~~~~Y~~sK~a~~~l~~~la~~~~--~~~i~v 184 (253)
T PRK08642 151 -------NPVVPYHDYTTAKAALLGLTRNLAAELG--PYGITV 184 (253)
T ss_pred -------CCCCCccchHHHHHHHHHHHHHHHHHhC--ccCeEE
Confidence 1233344788999999999988888765 344553
No 125
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=98.54 E-value=4.3e-07 Score=86.61 Aligned_cols=115 Identities=17% Similarity=0.149 Sum_probs=73.6
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhh--hHhhhhh--hcc-CCccceEEeCCHHHH
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNG--VKMELID--AAF-PLLKGVVATTDVVEA 78 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~--~~~dl~~--~~~-~~~~~v~~~~~~~~a 78 (332)
+++||+||||+|+||++++..|++.++ +|++++++.. .... ...++.. ... ....|+....++.++
T Consensus 59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~-------~V~~l~R~~~--~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~ 129 (390)
T PLN02657 59 KDVTVLVVGATGYIGKFVVRELVRRGY-------NVVAVAREKS--GIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKV 129 (390)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEEechh--hccccchhhHHhhhcCCceEEEeeCCCHHHHHHH
Confidence 467999999999999999999998876 8888887532 1110 0001100 000 112455555556666
Q ss_pred hC----CCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeC
Q 019990 79 CK----DVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVAN 132 (332)
Q Consensus 79 ~~----~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~sn 132 (332)
++ ++|+|||+++.+... . .+....|.....++++++++.+ . .++|++|+
T Consensus 130 ~~~~~~~~D~Vi~~aa~~~~~--~-~~~~~vn~~~~~~ll~aa~~~g-v-~r~V~iSS 182 (390)
T PLN02657 130 LFSEGDPVDVVVSCLASRTGG--V-KDSWKIDYQATKNSLDAGREVG-A-KHFVLLSA 182 (390)
T ss_pred HHHhCCCCcEEEECCccCCCC--C-ccchhhHHHHHHHHHHHHHHcC-C-CEEEEEee
Confidence 66 589999988753211 1 2335667888899999998875 2 25666664
No 126
>PLN02253 xanthoxin dehydrogenase
Probab=98.54 E-value=1.4e-06 Score=78.99 Aligned_cols=152 Identities=16% Similarity=0.100 Sum_probs=90.6
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh-cc-CCccceEEeCCHHHHhC--
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA-AF-PLLKGVVATTDVVEACK-- 80 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~-~~-~~~~~v~~~~~~~~a~~-- 80 (332)
.++++||||+|+||++++..|++.|. +|+++|++. +.......++... .. .+..|+....++.++++
T Consensus 18 ~k~~lItGas~gIG~~la~~l~~~G~-------~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 88 (280)
T PLN02253 18 GKVALVTGGATGIGESIVRLFHKHGA-------KVCIVDLQD--DLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFT 88 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHH
Confidence 46799999999999999999998875 899998753 2222222222110 00 11234444333444333
Q ss_pred -----CCcEEEEecCCCCCC-----CCCh---hHHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHHHC
Q 019990 81 -----DVNIAVMVGGFPRKE-----GMER---KDVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKEFA 145 (332)
Q Consensus 81 -----~aDiVi~~ag~~~~~-----~~~~---~~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~~~ 145 (332)
..|++||.||..... ..+. ...++.|+.....+++++.+.- ...+.++++++....
T Consensus 89 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~--------- 159 (280)
T PLN02253 89 VDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASA--------- 159 (280)
T ss_pred HHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhc---------
Confidence 689999999874321 1121 2356778777666665554321 123466666653221
Q ss_pred CCCCCCcEEEeecccHHHHHHHHHHHcCC
Q 019990 146 PSIPAKNITCLTRLDHNRAMGQISERLKV 174 (332)
Q Consensus 146 ~~~~~~~i~~~t~l~~~r~~~~~a~~~~v 174 (332)
.+.+....|+.+|.....+.+.+++.++-
T Consensus 160 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~ 188 (280)
T PLN02253 160 IGGLGPHAYTGSKHAVLGLTRSVAAELGK 188 (280)
T ss_pred ccCCCCcccHHHHHHHHHHHHHHHHHhhh
Confidence 11222336888999888998888888764
No 127
>PRK07326 short chain dehydrogenase; Provisional
Probab=98.54 E-value=4.1e-07 Score=80.20 Aligned_cols=151 Identities=14% Similarity=0.100 Sum_probs=82.1
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh-cc-CCccceEEeCCHHHHh--
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA-AF-PLLKGVVATTDVVEAC-- 79 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~-~~-~~~~~v~~~~~~~~a~-- 79 (332)
..++|+||||+|++|++++..|+..+. +|++++++. +.+.....++... .. ....++....++.+.+
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~ 75 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-------KVAITARDQ--KELEEAAAELNNKGNVLGLAADVRDEADVQRAVDA 75 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-------EEEEeeCCH--HHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHH
Confidence 457899999999999999999998775 789998754 2222222233211 00 0112333233333333
Q ss_pred -----CCCcEEEEecCCCCCC---CCChh---HHHhhhHHHHHHHHHHHHhhc-CCCcEEEEEeCChhhHHHHHHHHCCC
Q 019990 80 -----KDVNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKAQASALEKHA-APNCKVLVVANPANTNALILKEFAPS 147 (332)
Q Consensus 80 -----~~aDiVi~~ag~~~~~---~~~~~---~~~~~N~~~~~~i~~~i~~~~-~~~~~viv~snp~~~~~~~~~~~~~~ 147 (332)
..+|+|||++|..... ..+.. +.+..|+.....+.+++.+.. .....++++|+.... .+
T Consensus 76 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~---------~~ 146 (237)
T PRK07326 76 IVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGT---------NF 146 (237)
T ss_pred HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhc---------cC
Confidence 3789999999864321 12222 345667766666655554431 123456666653211 11
Q ss_pred CCCCcEEEeecccHHHHHHHHHHHc
Q 019990 148 IPAKNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 148 ~~~~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
.+....|+.++.....+...++..+
T Consensus 147 ~~~~~~y~~sk~a~~~~~~~~~~~~ 171 (237)
T PRK07326 147 FAGGAAYNASKFGLVGFSEAAMLDL 171 (237)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHh
Confidence 2222345556655555555555443
No 128
>PRK12320 hypothetical protein; Provisional
Probab=98.54 E-value=3.5e-07 Score=92.18 Aligned_cols=135 Identities=12% Similarity=0.135 Sum_probs=84.8
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc-CCccceEEeCCHHHHhCCCcE
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF-PLLKGVVATTDVVEACKDVNI 84 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~a~~~aDi 84 (332)
|||+||||+||||++++..|++.++ +|+.+|+... .. ....+ ....++... .+.+++.++|+
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~-------~Vi~ldr~~~--~~-------~~~~ve~v~~Dl~d~-~l~~al~~~D~ 63 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGH-------TVSGIAQHPH--DA-------LDPRVDYVCASLRNP-VLQELAGEADA 63 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-------EEEEEeCChh--hc-------ccCCceEEEccCCCH-HHHHHhcCCCE
Confidence 4899999999999999999998876 8999986431 10 00001 111334332 24566789999
Q ss_pred EEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCcEEEeecccHHHH
Q 019990 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRA 164 (332)
Q Consensus 85 Vi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~i~~~t~l~~~r~ 164 (332)
|||+|+... .. ....|+.++.++++++++.+ +++|++|+-.. . + . .+. ..+.+
T Consensus 64 VIHLAa~~~--~~----~~~vNv~Gt~nLleAA~~~G---vRiV~~SS~~G----------~--~-~-~~~----~aE~l 116 (699)
T PRK12320 64 VIHLAPVDT--SA----PGGVGITGLAHVANAAARAG---ARLLFVSQAAG----------R--P-E-LYR----QAETL 116 (699)
T ss_pred EEEcCccCc--cc----hhhHHHHHHHHHHHHHHHcC---CeEEEEECCCC----------C--C-c-ccc----HHHHH
Confidence 999997531 11 12468899999999998874 36666664210 0 0 0 000 12222
Q ss_pred HHHHHHHcCCCCCCeeeeEEEecC
Q 019990 165 MGQISERLKVHVSDVKNVIIWGNH 188 (332)
Q Consensus 165 ~~~~a~~~~v~~~~v~~~~V~G~h 188 (332)
....+++...+|.++|||+.
T Consensus 117 ----l~~~~~p~~ILR~~nVYGp~ 136 (699)
T PRK12320 117 ----VSTGWAPSLVIRIAPPVGRQ 136 (699)
T ss_pred ----HHhcCCCEEEEeCceecCCC
Confidence 23355777788888888864
No 129
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=98.54 E-value=9.1e-07 Score=78.79 Aligned_cols=156 Identities=15% Similarity=0.118 Sum_probs=86.7
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHH-------
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEA------- 78 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a------- 78 (332)
|+|+||||+|++|++++..|++.|. +|.+++++. +.+......+..-......|+....++.+.
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~ 71 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGH-------KVIATGRRQ--ERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAE 71 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHH
Confidence 4799999999999999999998875 889998853 222221111110000111233333333332
Q ss_pred hCCCcEEEEecCCCC--CC--CCCh---hHHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHHHCCCCC
Q 019990 79 CKDVNIAVMVGGFPR--KE--GMER---KDVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKEFAPSIP 149 (332)
Q Consensus 79 ~~~aDiVi~~ag~~~--~~--~~~~---~~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~~~~~~~ 149 (332)
+.++|+|||.+|... .+ ..+. .+.++.|......+...+..+. ....+++++|+.... .+++
T Consensus 72 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~---------~~~~ 142 (248)
T PRK10538 72 WRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGS---------WPYA 142 (248)
T ss_pred cCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccC---------CCCC
Confidence 237899999998632 11 1122 2346667766544444443322 123466666653211 1233
Q ss_pred CCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 150 AKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 150 ~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
....|+.++.....+...+++.++ +..++.
T Consensus 143 ~~~~Y~~sK~~~~~~~~~l~~~~~--~~~i~v 172 (248)
T PRK10538 143 GGNVYGATKAFVRQFSLNLRTDLH--GTAVRV 172 (248)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhc--CCCcEE
Confidence 344677777776777777776654 345553
No 130
>PRK12828 short chain dehydrogenase; Provisional
Probab=98.54 E-value=3.9e-07 Score=80.17 Aligned_cols=151 Identities=14% Similarity=0.075 Sum_probs=82.0
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccC-CccceEEeCCHHHHh---
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFP-LLKGVVATTDVVEAC--- 79 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~-~~~~v~~~~~~~~a~--- 79 (332)
+.++|+||||+|+||++++..|++.|. ++++++++.. .......++...... ...|+....++.+++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-------~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-------RVALIGRGAA--PLSQTLPGVPADALRIGGIDLVDPQAARRAVDEV 76 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-------eEEEEeCChH--hHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHH
Confidence 467899999999999999999998875 7999998542 222112222211111 112333323333332
Q ss_pred ----CCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHHHCCC
Q 019990 80 ----KDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKEFAPS 147 (332)
Q Consensus 80 ----~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~~~~~ 147 (332)
.++|+|||.+|..... ..+. .+.+..|......+++++.++- .+..+++++|+.... ..
T Consensus 77 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~---------~~ 147 (239)
T PRK12828 77 NRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAAL---------KA 147 (239)
T ss_pred HHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhc---------cC
Confidence 3689999998863211 1122 2235567766666666654321 123466666653211 11
Q ss_pred CCCCcEEEeecccHHHHHHHHHHHc
Q 019990 148 IPAKNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 148 ~~~~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
.+....|+.++.....+...+++.+
T Consensus 148 ~~~~~~y~~sk~a~~~~~~~~a~~~ 172 (239)
T PRK12828 148 GPGMGAYAAAKAGVARLTEALAAEL 172 (239)
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHh
Confidence 1222245556655555555566553
No 131
>PRK07024 short chain dehydrogenase; Provisional
Probab=98.54 E-value=5.1e-07 Score=80.89 Aligned_cols=148 Identities=19% Similarity=0.220 Sum_probs=86.1
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh-cc-CCccceEEeCCHHHHhC--
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA-AF-PLLKGVVATTDVVEACK-- 80 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~-~~-~~~~~v~~~~~~~~a~~-- 80 (332)
+++|+||||+|+||.+++..|++.|. +|+++|++. +.+.....++... .. ....|++...++.++++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~ 72 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-------TLGLVARRT--DALQAFAARLPKAARVSVYAADVRDADALAAAAADF 72 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHH
Confidence 36899999999999999999998875 799999753 2333222222111 11 11234443333433332
Q ss_pred -----CCcEEEEecCCCCCCC----CCh---hHHHhhhHHHHHHHH----HHHHhhcCCCcEEEEEeCChhhHHHHHHHH
Q 019990 81 -----DVNIAVMVGGFPRKEG----MER---KDVMSKNVSIYKAQA----SALEKHAAPNCKVLVVANPANTNALILKEF 144 (332)
Q Consensus 81 -----~aDiVi~~ag~~~~~~----~~~---~~~~~~N~~~~~~i~----~~i~~~~~~~~~viv~snp~~~~~~~~~~~ 144 (332)
..|++||.+|...... .+. ...++.|+.....+. ..+++.+ ...++++++-...
T Consensus 73 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~--~~~iv~isS~~~~-------- 142 (257)
T PRK07024 73 IAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR--RGTLVGIASVAGV-------- 142 (257)
T ss_pred HHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC--CCEEEEEechhhc--------
Confidence 3699999998643211 111 234566766555544 4555543 3466666642211
Q ss_pred CCCCCCCcEEEeecccHHHHHHHHHHHc
Q 019990 145 APSIPAKNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 145 ~~~~~~~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
.+.+....|+.+|.....+...++..+
T Consensus 143 -~~~~~~~~Y~asK~a~~~~~~~l~~e~ 169 (257)
T PRK07024 143 -RGLPGAGAYSASKAAAIKYLESLRVEL 169 (257)
T ss_pred -CCCCCCcchHHHHHHHHHHHHHHHHHh
Confidence 123333467888888888877777654
No 132
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=98.53 E-value=1.2e-06 Score=78.04 Aligned_cols=171 Identities=17% Similarity=0.153 Sum_probs=106.6
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc---c-CCccceEEeCCHHHH
Q 019990 3 KNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA---F-PLLKGVVATTDVVEA 78 (332)
Q Consensus 3 ~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~---~-~~~~~v~~~~~~~~a 78 (332)
+++++++||||++.||..++..|++.|+ .+.|+.++. +++.....++.+.. . ....|++...+....
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-------~liLvaR~~--~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l 74 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-------NLILVARRE--DKLEALAKELEDKTGVEVEVIPADLSDPEALERL 74 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCcH--HHHHHHHHHHHHhhCceEEEEECcCCChhHHHHH
Confidence 4677899999999999999999999986 899999864 57777777776532 1 122455544443321
Q ss_pred ---h----CCCcEEEEecCCCCCC------CCChhHHHhhhHHHH----HHHHHHHHhhcCCCcEEEEEeCChhhHHHHH
Q 019990 79 ---C----KDVNIAVMVGGFPRKE------GMERKDVMSKNVSIY----KAQASALEKHAAPNCKVLVVANPANTNALIL 141 (332)
Q Consensus 79 ---~----~~aDiVi~~ag~~~~~------~~~~~~~~~~N~~~~----~~i~~~i~~~~~~~~~viv~snp~~~~~~~~ 141 (332)
+ ...|+.|..||..... .....++++.|+... +.++..+.+.+ .+.+|++++-...
T Consensus 75 ~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~--~G~IiNI~S~ag~----- 147 (265)
T COG0300 75 EDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG--AGHIINIGSAAGL----- 147 (265)
T ss_pred HHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CceEEEEechhhc-----
Confidence 2 2589999999874321 122345777786544 55566666643 4577887753221
Q ss_pred HHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecCCCceeeccc
Q 019990 142 KEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVN 197 (332)
Q Consensus 142 ~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg~~~v~~~s 197 (332)
..-|...+|+.||---.-|...+...+ ....|+... +.+ |.+.-..|.
T Consensus 148 ----~p~p~~avY~ATKa~v~~fSeaL~~EL--~~~gV~V~~-v~P-G~~~T~f~~ 195 (265)
T COG0300 148 ----IPTPYMAVYSATKAFVLSFSEALREEL--KGTGVKVTA-VCP-GPTRTEFFD 195 (265)
T ss_pred ----CCCcchHHHHHHHHHHHHHHHHHHHHh--cCCCeEEEE-Eec-Ccccccccc
Confidence 112333467777766666666666555 556666543 343 444444443
No 133
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.53 E-value=4.1e-07 Score=80.93 Aligned_cols=154 Identities=15% Similarity=0.090 Sum_probs=86.7
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHH-
Q 019990 3 KNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEA- 78 (332)
Q Consensus 3 ~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a- 78 (332)
.++++|+||||+|+||++++..|++.+. ++++...... +........+.... . ....|++...++.++
T Consensus 4 ~~~~~vlitGasg~iG~~l~~~l~~~g~-------~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 75 (252)
T PRK06077 4 LKDKVVVVTGSGRGIGRAIAVRLAKEGS-------LVVVNAKKRA-EEMNETLKMVKENGGEGIGVLADVSTREGCETLA 75 (252)
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCCh-HHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHH
Confidence 4568999999999999999999998875 5655443221 12222222221110 0 011233333322222
Q ss_pred ------hCCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCC
Q 019990 79 ------CKDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAP 146 (332)
Q Consensus 79 ------~~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~ 146 (332)
+...|+|||+||..... ..+. .+.++.|......+.+.+.++-.+..+++++|+-.. + .
T Consensus 76 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~---~------~ 146 (252)
T PRK06077 76 KATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG---I------R 146 (252)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc---c------C
Confidence 34679999999863211 1222 234566776666666666654323346666664211 0 2
Q ss_pred CCCCCcEEEeecccHHHHHHHHHHHcC
Q 019990 147 SIPAKNITCLTRLDHNRAMGQISERLK 173 (332)
Q Consensus 147 ~~~~~~i~~~t~l~~~r~~~~~a~~~~ 173 (332)
+.++...|+.++.....+...+++.++
T Consensus 147 ~~~~~~~Y~~sK~~~~~~~~~l~~~~~ 173 (252)
T PRK06077 147 PAYGLSIYGAMKAAVINLTKYLALELA 173 (252)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 334444577788877888888888875
No 134
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=98.53 E-value=6.7e-07 Score=79.14 Aligned_cols=158 Identities=16% Similarity=0.210 Sum_probs=87.1
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHH-----
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEA----- 78 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a----- 78 (332)
+.++++||||+|+||++++..|++.+. .+.+.+.+. +.+.....++.........|+....++.++
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-------~v~~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-------IVGLHGTRV--EKLEALAAELGERVKIFPANLSDRDEVKALGQKAE 75 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEcCCH--HHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHH
Confidence 567999999999999999999998875 677777643 223222112110000111233332233222
Q ss_pred --hCCCcEEEEecCCCCCC---CCC---hhHHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHHHCCCC
Q 019990 79 --CKDVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKEFAPSI 148 (332)
Q Consensus 79 --~~~aDiVi~~ag~~~~~---~~~---~~~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~~~~~~ 148 (332)
+...|+|||+||..... ..+ -...++.|+.....+++++.+.. .....++++|+.... .+.
T Consensus 76 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~---------~~~ 146 (245)
T PRK12936 76 ADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGV---------TGN 146 (245)
T ss_pred HHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhC---------cCC
Confidence 34689999999864211 111 12346677776666655543321 123466777754221 122
Q ss_pred CCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 149 PAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 149 ~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
+....|+.++.....+.+.+++.+. +..++.
T Consensus 147 ~~~~~Y~~sk~a~~~~~~~la~~~~--~~~i~v 177 (245)
T PRK12936 147 PGQANYCASKAGMIGFSKSLAQEIA--TRNVTV 177 (245)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhh--HhCeEE
Confidence 3333567777766667666776643 234553
No 135
>PRK08267 short chain dehydrogenase; Provisional
Probab=98.53 E-value=1.2e-06 Score=78.51 Aligned_cols=159 Identities=16% Similarity=0.128 Sum_probs=88.4
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc-CCccceEEeCCHHHHh----
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF-PLLKGVVATTDVVEAC---- 79 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~a~---- 79 (332)
|++++||||+|+||++++..|++.|. +|.+++++. +.+.....++..... ....|+....++.+++
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 71 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGW-------RVGAYDINE--AGLAALAAELGAGNAWTGALDVTDRAAWDAALADFA 71 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 35799999999999999999998885 788888753 222222112211111 1123443333333333
Q ss_pred ----CCCcEEEEecCCCCCC---CCC---hhHHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHHHCCC
Q 019990 80 ----KDVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKEFAPS 147 (332)
Q Consensus 80 ----~~aDiVi~~ag~~~~~---~~~---~~~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~~~~~ 147 (332)
...|+|||+||..... ..+ ....+..|+.....+.+++..+- .+..+++++|+.... .+
T Consensus 72 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~---------~~ 142 (260)
T PRK08267 72 AATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAI---------YG 142 (260)
T ss_pred HHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhC---------cC
Confidence 2469999999874321 111 13356778877766666654321 134566766653221 11
Q ss_pred CCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeE
Q 019990 148 IPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVI 183 (332)
Q Consensus 148 ~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~ 183 (332)
.+....|+.++.....+...++..+. +..++...
T Consensus 143 ~~~~~~Y~~sKaa~~~~~~~l~~~~~--~~~i~v~~ 176 (260)
T PRK08267 143 QPGLAVYSATKFAVRGLTEALDLEWR--RHGIRVAD 176 (260)
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHhc--ccCcEEEE
Confidence 11122456666666666666666543 34565433
No 136
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=98.52 E-value=6.9e-07 Score=79.52 Aligned_cols=147 Identities=16% Similarity=0.148 Sum_probs=80.5
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCC-------H
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTD-------V 75 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~-------~ 75 (332)
++|+||||+|++|++++..|++.|. +|++++++.. ..+....++.... . ....|+....+ .
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~-------~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 72 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGA-------NVVVNDLGEA--GAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAA 72 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCC-------EEEEEeCCHH--HHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence 5799999999999999999998875 8999998642 2222212221110 1 01123333332 2
Q ss_pred HHHhCCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHH----HhhcCCCcEEEEEeCChhhHHHHHHHHC
Q 019990 76 VEACKDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASAL----EKHAAPNCKVLVVANPANTNALILKEFA 145 (332)
Q Consensus 76 ~~a~~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i----~~~~~~~~~viv~snp~~~~~~~~~~~~ 145 (332)
.+.+.+.|+|||.+|..... ..+. ...++.|......+.+.+ ++.. ..+++++|+....
T Consensus 73 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~--~~~~v~~ss~~~~--------- 141 (255)
T TIGR01963 73 AAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG--WGRIINIASAHGL--------- 141 (255)
T ss_pred HHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CeEEEEEcchhhc---------
Confidence 23345689999999864211 1121 234556776655555555 4432 2356666642110
Q ss_pred CCCCCCcEEEeecccHHHHHHHHHHHc
Q 019990 146 PSIPAKNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 146 ~~~~~~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
.+.+....|+.++.....+...++..+
T Consensus 142 ~~~~~~~~y~~sk~a~~~~~~~~~~~~ 168 (255)
T TIGR01963 142 VASPFKSAYVAAKHGLIGLTKVLALEV 168 (255)
T ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHh
Confidence 122333356666665555555555543
No 137
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=98.52 E-value=5.1e-07 Score=80.13 Aligned_cols=161 Identities=17% Similarity=0.109 Sum_probs=88.6
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHHh-
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEAC- 79 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a~- 79 (332)
++++|+||||+|++|++++..|++.|. +|++++++.. .+.....++.... . ....|+....++.+.+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-------~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~ 75 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-------EVIVVDICGD--DAAATAELVEAAGGKARARQVDVRDRAALKAAVA 75 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-------EEEEEeCCHH--HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence 356899999999999999999998875 7888887532 2222222222110 0 1112443333333333
Q ss_pred ------CCCcEEEEecCCCCC-C--CCCh---hHHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHHHC
Q 019990 80 ------KDVNIAVMVGGFPRK-E--GMER---KDVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKEFA 145 (332)
Q Consensus 80 ------~~aDiVi~~ag~~~~-~--~~~~---~~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~~~ 145 (332)
..+|+|||++|.... + ..+. .+.+..|+.....+.+.+..+- ....+++++|+-... .
T Consensus 76 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~------~-- 147 (251)
T PRK12826 76 AGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGP------R-- 147 (251)
T ss_pred HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhh------c--
Confidence 368999999976432 1 1222 2346677777766666654221 112356666643211 0
Q ss_pred CCCCCCcEEEeecccHHHHHHHHHHHc---CCCCCCeee
Q 019990 146 PSIPAKNITCLTRLDHNRAMGQISERL---KVHVSDVKN 181 (332)
Q Consensus 146 ~~~~~~~i~~~t~l~~~r~~~~~a~~~---~v~~~~v~~ 181 (332)
.+.+....|+.++.....+...+++.+ |++...+++
T Consensus 148 ~~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~p 186 (251)
T PRK12826 148 VGYPGLAHYAASKAGLVGFTRALALELAARNITVNSVHP 186 (251)
T ss_pred cCCCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEee
Confidence 122333345666666666666666654 544444443
No 138
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=98.52 E-value=1.1e-07 Score=84.94 Aligned_cols=169 Identities=14% Similarity=0.083 Sum_probs=85.1
Q ss_pred EEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhh-hhHhhhhhh----------c---cCCccceEEe---
Q 019990 10 VTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALN-GVKMELIDA----------A---FPLLKGVVAT--- 72 (332)
Q Consensus 10 VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~-~~~~dl~~~----------~---~~~~~~v~~~--- 72 (332)
||||+||+|++++..|++.+.. .+|+++-+..+..... .....+.+. . ....+|++..
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~-----~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lG 75 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPD-----VKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLG 75 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-T-----TEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG
T ss_pred CcCCCcHHHHHHHHHHHcCCCC-----cEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccC
Confidence 7999999999999999886531 1677776644221111 111111100 0 0111233211
Q ss_pred --CCHHHH-hCCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCCh-hhHHH--H------
Q 019990 73 --TDVVEA-CKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPA-NTNAL--I------ 140 (332)
Q Consensus 73 --~~~~~a-~~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~-~~~~~--~------ 140 (332)
.+.++. .+++|+|||+|+.-.- ..+..++...|+.+++++++.+.+.. ..+++.+|+.. ..... .
T Consensus 76 L~~~~~~~L~~~v~~IiH~Aa~v~~-~~~~~~~~~~NV~gt~~ll~la~~~~--~~~~~~iSTa~v~~~~~~~~~~~~~~ 152 (249)
T PF07993_consen 76 LSDEDYQELAEEVDVIIHCAASVNF-NAPYSELRAVNVDGTRNLLRLAAQGK--RKRFHYISTAYVAGSRPGTIEEKVYP 152 (249)
T ss_dssp --HHHHHHHHHH--EEEE--SS-SB-S-S--EEHHHHHHHHHHHHHHHTSSS-----EEEEEEGGGTTS-TTT--SSS-H
T ss_pred CChHHhhccccccceeeecchhhhh-cccchhhhhhHHHHHHHHHHHHHhcc--CcceEEeccccccCCCCCcccccccc
Confidence 112223 3689999999876432 23445578899999999999999653 23667666521 10000 0
Q ss_pred HHHHC--CCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEe
Q 019990 141 LKEFA--PSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWG 186 (332)
Q Consensus 141 ~~~~~--~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G 186 (332)
..+.. .......-|.-+|..++++....++..|++...+|...|+|
T Consensus 153 ~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g 200 (249)
T PF07993_consen 153 EEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVG 200 (249)
T ss_dssp HH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-
T ss_pred cccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccc
Confidence 01100 00111124667899999999998888899999999988877
No 139
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=98.52 E-value=3e-07 Score=85.33 Aligned_cols=161 Identities=13% Similarity=0.054 Sum_probs=89.8
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh--cc-CCccceEEeCCHHHHhC
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA--AF-PLLKGVVATTDVVEACK 80 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~--~~-~~~~~v~~~~~~~~a~~ 80 (332)
++++|+||||+|+||.+++..|++.|. +|++.+++. +.+.....++... .. ....|+....++.++++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~ 75 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-------HVIMACRNL--KKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVD 75 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHH
Confidence 567899999999999999999998875 788888753 2333222223111 00 01124433333333332
Q ss_pred -------CCcEEEEecCCCCC----CCCCh---hHHHhhhHHHHHHHHHHHH----hhcCCCcEEEEEeCChhhHHH---
Q 019990 81 -------DVNIAVMVGGFPRK----EGMER---KDVMSKNVSIYKAQASALE----KHAAPNCKVLVVANPANTNAL--- 139 (332)
Q Consensus 81 -------~aDiVi~~ag~~~~----~~~~~---~~~~~~N~~~~~~i~~~i~----~~~~~~~~viv~snp~~~~~~--- 139 (332)
..|++|+.||.... ...+. ...+..|......+.+.+. +......++|++|+-......
T Consensus 76 ~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~ 155 (322)
T PRK07453 76 DFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGG 155 (322)
T ss_pred HHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCC
Confidence 48999999986321 11222 2346778766655555444 332112467776642110000
Q ss_pred --------HHHHH---------------CCCCCCCcEEEeecccHHHHHHHHHHHcC
Q 019990 140 --------ILKEF---------------APSIPAKNITCLTRLDHNRAMGQISERLK 173 (332)
Q Consensus 140 --------~~~~~---------------~~~~~~~~i~~~t~l~~~r~~~~~a~~~~ 173 (332)
-+... ...+.+...|+.+|+....+...+++.+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~ 212 (322)
T PRK07453 156 KIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYH 212 (322)
T ss_pred ccCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhc
Confidence 00000 01233445688899988888888888873
No 140
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=98.52 E-value=9.5e-07 Score=79.11 Aligned_cols=157 Identities=11% Similarity=0.080 Sum_probs=88.1
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHHhC
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEACK 80 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a~~ 80 (332)
+.++|+||||+|+||.+++..|++.|. ++.+++++.. .......+.... . .+..|+....+..+.++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-------~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~ 83 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-------DIIITTHGTN---WDETRRLIEKEGRKVTFVQVDLTKPESAEKVVK 83 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCcH---HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence 457899999999999999999998875 7888887521 111111121111 0 11234433333333333
Q ss_pred -------CCcEEEEecCCCCC---CCCCh---hHHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHHHC
Q 019990 81 -------DVNIAVMVGGFPRK---EGMER---KDVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKEFA 145 (332)
Q Consensus 81 -------~aDiVi~~ag~~~~---~~~~~---~~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~~~ 145 (332)
..|++||++|.... ...+. ...+..|+.....+.+.+..+. ....+++++|+....
T Consensus 84 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~--------- 154 (258)
T PRK06935 84 EALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSF--------- 154 (258)
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhc---------
Confidence 57999999986421 11122 2345566655544444433321 123466766653211
Q ss_pred CCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 146 PSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 146 ~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.++.....+.+.+++.++ +..++.
T Consensus 155 ~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~v 188 (258)
T PRK06935 155 QGGKFVPAYTASKHGVAGLTKAFANELA--AYNIQV 188 (258)
T ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHhh--hhCeEE
Confidence 1122223567788877888888888765 445663
No 141
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=98.51 E-value=4.6e-07 Score=81.39 Aligned_cols=165 Identities=18% Similarity=0.097 Sum_probs=93.9
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHh-
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEAC- 79 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~- 79 (332)
|..+.++++||||+|+||++++..|++.|. +|+++|++. +.+................|+....+..+++
T Consensus 1 m~~~~k~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~ 71 (262)
T TIGR03325 1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGA-------RVAVLDKSA--AGLQELEAAHGDAVVGVEGDVRSLDDHKEAVA 71 (262)
T ss_pred CCcCCcEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHhhcCCceEEEEeccCCHHHHHHHHH
Confidence 766778999999999999999999999885 889998753 2222111111000001112333322232322
Q ss_pred ------CCCcEEEEecCCCCC--C--CCCh-------hHHHhhhHHHHHHHHHHHHhhc-CCCcEEEEEeCChhhHHHHH
Q 019990 80 ------KDVNIAVMVGGFPRK--E--GMER-------KDVMSKNVSIYKAQASALEKHA-APNCKVLVVANPANTNALIL 141 (332)
Q Consensus 80 ------~~aDiVi~~ag~~~~--~--~~~~-------~~~~~~N~~~~~~i~~~i~~~~-~~~~~viv~snp~~~~~~~~ 141 (332)
...|++|+.||.... + ..+. ...++.|+.....+++++.++- .....++++++....
T Consensus 72 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~----- 146 (262)
T TIGR03325 72 RCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGF----- 146 (262)
T ss_pred HHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEecccee-----
Confidence 467999999986321 1 1111 2346677776666666665431 112345555432211
Q ss_pred HHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEec
Q 019990 142 KEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGN 187 (332)
Q Consensus 142 ~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~ 187 (332)
.+.+....|+.+|.....+.+.+++.++ +. +|. +.+-+
T Consensus 147 ----~~~~~~~~Y~~sKaa~~~l~~~la~e~~--~~-irv-n~i~P 184 (262)
T TIGR03325 147 ----YPNGGGPLYTAAKHAVVGLVKELAFELA--PY-VRV-NGVAP 184 (262)
T ss_pred ----cCCCCCchhHHHHHHHHHHHHHHHHhhc--cC-eEE-EEEec
Confidence 1122223578888888888888988876 33 663 33444
No 142
>PRK06101 short chain dehydrogenase; Provisional
Probab=98.51 E-value=8.8e-07 Score=78.53 Aligned_cols=149 Identities=16% Similarity=0.130 Sum_probs=89.8
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCC---
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKD--- 81 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~--- 81 (332)
|++|+||||+|+||.+++..|+..|. ++.+++++. +.+........+. .....|++...++.++++.
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~ 70 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQGW-------QVIACGRNQ--SVLDELHTQSANI-FTLAFDVTDHPGTKAALSQLPF 70 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCCC-------EEEEEECCH--HHHHHHHHhcCCC-eEEEeeCCCHHHHHHHHHhccc
Confidence 35799999999999999999998875 899999853 2222111111111 1112345444444444443
Q ss_pred -CcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCcEE
Q 019990 82 -VNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNIT 154 (332)
Q Consensus 82 -aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~i~ 154 (332)
.|.+|+.||..... ..+. ...+..|......+.+.+..+-.+..+++++|+.... .+.+....|
T Consensus 71 ~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~---------~~~~~~~~Y 141 (240)
T PRK06101 71 IPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASE---------LALPRAEAY 141 (240)
T ss_pred CCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhc---------cCCCCCchh
Confidence 47888888753211 1122 2357788888888888777642223456666653221 123333468
Q ss_pred EeecccHHHHHHHHHHHc
Q 019990 155 CLTRLDHNRAMGQISERL 172 (332)
Q Consensus 155 ~~t~l~~~r~~~~~a~~~ 172 (332)
+.++.....+...++..+
T Consensus 142 ~asK~a~~~~~~~l~~e~ 159 (240)
T PRK06101 142 GASKAAVAYFARTLQLDL 159 (240)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 888888888887777554
No 143
>PRK06196 oxidoreductase; Provisional
Probab=98.50 E-value=3.3e-07 Score=84.76 Aligned_cols=163 Identities=10% Similarity=0.028 Sum_probs=90.5
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHh-----
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEAC----- 79 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~----- 79 (332)
.++|+||||+|+||++++..|++.|. +|++.+++. +.+.....++... .....|+....++.+++
T Consensus 26 ~k~vlITGasggIG~~~a~~L~~~G~-------~Vv~~~R~~--~~~~~~~~~l~~v-~~~~~Dl~d~~~v~~~~~~~~~ 95 (315)
T PRK06196 26 GKTAIVTGGYSGLGLETTRALAQAGA-------HVIVPARRP--DVAREALAGIDGV-EVVMLDLADLESVRAFAERFLD 95 (315)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhhhC-eEEEccCCCHHHHHHHHHHHHh
Confidence 46899999999999999999999885 788888753 2222222222211 11123444333333322
Q ss_pred --CCCcEEEEecCCCCCCC----CChhHHHhhhHHH----HHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHH-H--CC
Q 019990 80 --KDVNIAVMVGGFPRKEG----MERKDVMSKNVSI----YKAQASALEKHAAPNCKVLVVANPANTNALILKE-F--AP 146 (332)
Q Consensus 80 --~~aDiVi~~ag~~~~~~----~~~~~~~~~N~~~----~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~-~--~~ 146 (332)
.+.|++||.||....+. ..-+..+..|... ++.+++.+++.+ ..++|++|+........... . ..
T Consensus 96 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~--~~~iV~vSS~~~~~~~~~~~~~~~~~ 173 (315)
T PRK06196 96 SGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA--GARVVALSSAGHRRSPIRWDDPHFTR 173 (315)
T ss_pred cCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC--CCeEEEECCHHhccCCCCccccCccC
Confidence 46899999998642211 1112345667655 455555555542 35777777532110000000 0 01
Q ss_pred CCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 147 SIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 147 ~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
++++...|+.+|.....+...+++.+. ...|+.
T Consensus 174 ~~~~~~~Y~~SK~a~~~~~~~la~~~~--~~gi~v 206 (315)
T PRK06196 174 GYDKWLAYGQSKTANALFAVHLDKLGK--DQGVRA 206 (315)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHhc--CCCcEE
Confidence 223333577788888888888887753 234553
No 144
>PRK07060 short chain dehydrogenase; Provisional
Probab=98.50 E-value=3.4e-07 Score=81.09 Aligned_cols=148 Identities=20% Similarity=0.172 Sum_probs=86.5
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhC---C
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACK---D 81 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~---~ 81 (332)
.++++||||+|+||++++..|++.+. +|++++++. +.+......+ .. .....|+....++.++++ .
T Consensus 9 ~~~~lItGa~g~iG~~~a~~l~~~g~-------~V~~~~r~~--~~~~~~~~~~-~~-~~~~~D~~~~~~v~~~~~~~~~ 77 (245)
T PRK07060 9 GKSVLVTGASSGIGRACAVALAQRGA-------RVVAAARNA--AALDRLAGET-GC-EPLRLDVGDDAAIRAALAAAGA 77 (245)
T ss_pred CCEEEEeCCcchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHh-CC-eEEEecCCCHHHHHHHHHHhCC
Confidence 47899999999999999999998875 789998753 2222111111 00 011123333333334333 5
Q ss_pred CcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHHHhhcC-C--CcEEEEEeCChhhHHHHHHHHCCCCCCCc
Q 019990 82 VNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEKHAA-P--NCKVLVVANPANTNALILKEFAPSIPAKN 152 (332)
Q Consensus 82 aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i~~~~~-~--~~~viv~snp~~~~~~~~~~~~~~~~~~~ 152 (332)
.|+|||.+|..... ..+. ...+..|+.....+.+++.+... . ..+++++|+.... .+.+...
T Consensus 78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~---------~~~~~~~ 148 (245)
T PRK07060 78 FDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAAL---------VGLPDHL 148 (245)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHc---------CCCCCCc
Confidence 79999999864311 1122 23455777777777776655421 1 2466666643211 1223333
Q ss_pred EEEeecccHHHHHHHHHHHc
Q 019990 153 ITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 153 i~~~t~l~~~r~~~~~a~~~ 172 (332)
.|+.++....++...+++.+
T Consensus 149 ~y~~sK~a~~~~~~~~a~~~ 168 (245)
T PRK07060 149 AYCASKAALDAITRVLCVEL 168 (245)
T ss_pred HhHHHHHHHHHHHHHHHHHH
Confidence 56778877788887787765
No 145
>PRK08265 short chain dehydrogenase; Provisional
Probab=98.50 E-value=1.3e-06 Score=78.56 Aligned_cols=162 Identities=14% Similarity=0.108 Sum_probs=92.4
Q ss_pred CC-CCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHh
Q 019990 1 MA-KNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEAC 79 (332)
Q Consensus 1 m~-~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~ 79 (332)
|. .+.++++||||+|.||.+++..|++.|. +|.+.|++. +.+.....++.........|+....++.+++
T Consensus 1 m~~~~~k~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 71 (261)
T PRK08265 1 MIGLAGKVAIVTGGATLIGAAVARALVAAGA-------RVAIVDIDA--DNGAAVAASLGERARFIATDITDDAAIERAV 71 (261)
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhCCeeEEEEecCCCHHHHHHHH
Confidence 54 2457899999999999999999999885 899999853 2222222122110011123444333333332
Q ss_pred -------CCCcEEEEecCCCCCC--CCChh---HHHhhhHHHHHHHHHHHHhhc-CCCcEEEEEeCChhhHHHHHHHHCC
Q 019990 80 -------KDVNIAVMVGGFPRKE--GMERK---DVMSKNVSIYKAQASALEKHA-APNCKVLVVANPANTNALILKEFAP 146 (332)
Q Consensus 80 -------~~aDiVi~~ag~~~~~--~~~~~---~~~~~N~~~~~~i~~~i~~~~-~~~~~viv~snp~~~~~~~~~~~~~ 146 (332)
...|++||.||..... ..+.. ..+..|+.....+.+.+..+- .+...++++++.... .
T Consensus 72 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~---------~ 142 (261)
T PRK08265 72 ATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAK---------F 142 (261)
T ss_pred HHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhc---------c
Confidence 3579999999864221 12222 345567665555555444321 134566666653211 1
Q ss_pred CCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeee
Q 019990 147 SIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNV 182 (332)
Q Consensus 147 ~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~ 182 (332)
+.+....|+.+|.....+.+.++..+. +..++..
T Consensus 143 ~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~vn 176 (261)
T PRK08265 143 AQTGRWLYPASKAAIRQLTRSMAMDLA--PDGIRVN 176 (261)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHhc--ccCEEEE
Confidence 223333677788777788777887764 4567743
No 146
>PRK06179 short chain dehydrogenase; Provisional
Probab=98.49 E-value=5.9e-07 Score=80.98 Aligned_cols=144 Identities=16% Similarity=0.136 Sum_probs=82.8
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhC---
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACK--- 80 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~--- 80 (332)
++++|+||||+|+||++++..|++.|. +|++.+++.. .... ..+. .....|+....++.++++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~-------~V~~~~r~~~--~~~~----~~~~-~~~~~D~~d~~~~~~~~~~~~ 68 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGY-------RVFGTSRNPA--RAAP----IPGV-ELLELDVTDDASVQAAVDEVI 68 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-------EEEEEeCChh--hccc----cCCC-eeEEeecCCHHHHHHHHHHHH
Confidence 456799999999999999999998875 7888887532 1110 0110 011234444344444443
Q ss_pred ----CCcEEEEecCCCCCCC---CC---hhHHHhhhHHHHHHHHHHH----HhhcCCCcEEEEEeCChhhHHHHHHHHCC
Q 019990 81 ----DVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASAL----EKHAAPNCKVLVVANPANTNALILKEFAP 146 (332)
Q Consensus 81 ----~aDiVi~~ag~~~~~~---~~---~~~~~~~N~~~~~~i~~~i----~~~~~~~~~viv~snp~~~~~~~~~~~~~ 146 (332)
..|+||+.||...... .+ -...+..|......+.+.+ ++.+ ..++|++|+.... .
T Consensus 69 ~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~--~~~iv~isS~~~~---------~ 137 (270)
T PRK06179 69 ARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG--SGRIINISSVLGF---------L 137 (270)
T ss_pred HhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CceEEEECCcccc---------C
Confidence 4799999998743211 11 1335667766665555554 4432 3466766653221 1
Q ss_pred CCCCCcEEEeecccHHHHHHHHHHHc
Q 019990 147 SIPAKNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 147 ~~~~~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
+.+....|+.++.....+...++..+
T Consensus 138 ~~~~~~~Y~~sK~a~~~~~~~l~~el 163 (270)
T PRK06179 138 PAPYMALYAASKHAVEGYSESLDHEV 163 (270)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 12222346666666666666666554
No 147
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.49 E-value=5.7e-07 Score=79.35 Aligned_cols=155 Identities=13% Similarity=0.154 Sum_probs=82.1
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh-cc-CCccceEEeCCHHHH
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA-AF-PLLKGVVATTDVVEA 78 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~-~~-~~~~~v~~~~~~~~a 78 (332)
|..+.++|+||||+|+||++++..|++.|. +|++++++. +.+.....++.+. .. ....|+....++.+.
T Consensus 1 ~~~~~~~vlItGa~g~iG~~~a~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 71 (238)
T PRK05786 1 MRLKGKKVAIIGVSEGLGYAVAYFALKEGA-------QVCINSRNE--NKLKRMKKTLSKYGNIHYVVGDVSSTESARNV 71 (238)
T ss_pred CCcCCcEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEECCCCCHHHHHHH
Confidence 554567999999999999999999998875 889998753 2222221222211 11 112344333333322
Q ss_pred -------hCCCcEEEEecCCCCCCC-CCh---hHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCC
Q 019990 79 -------CKDVNIAVMVGGFPRKEG-MER---KDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPS 147 (332)
Q Consensus 79 -------~~~aDiVi~~ag~~~~~~-~~~---~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~ 147 (332)
+...|.+|+.+|...... .+. ...+..|......+++.+...-.++..++++|+..... ..
T Consensus 72 ~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~--------~~ 143 (238)
T PRK05786 72 IEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIY--------KA 143 (238)
T ss_pred HHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcc--------cC
Confidence 234699999987532111 111 12344555544444444443321234666666543210 11
Q ss_pred CCCCcEEEeecccHHHHHHHHHHHc
Q 019990 148 IPAKNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 148 ~~~~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
.++...|+.++.....+...+++.+
T Consensus 144 ~~~~~~Y~~sK~~~~~~~~~~~~~~ 168 (238)
T PRK05786 144 SPDQLSYAVAKAGLAKAVEILASEL 168 (238)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHH
Confidence 2222345666666666666666665
No 148
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=98.49 E-value=6.1e-07 Score=84.05 Aligned_cols=171 Identities=16% Similarity=0.112 Sum_probs=98.7
Q ss_pred EEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhh-hhhhHhhhhhh----------cc-CCccceEEe--
Q 019990 7 RVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEA-LNGVKMELIDA----------AF-PLLKGVVAT-- 72 (332)
Q Consensus 7 kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~-~~~~~~dl~~~----------~~-~~~~~v~~~-- 72 (332)
+|+||||+||+|++++..|++.+.. .+|+++.+....+. .......+... .. ....++...
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~-----~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 75 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQ-----AKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRL 75 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCC-----CEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccC
Confidence 5899999999999999999987631 26888876543110 00110111100 00 011232211
Q ss_pred ----CCHHHHhCCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHH----HHHH
Q 019990 73 ----TDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALI----LKEF 144 (332)
Q Consensus 73 ----~~~~~a~~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~----~~~~ 144 (332)
.+..+...++|+|||+|+.... ..+..++...|+..+..+++.+.+.. .. +++++|+- ...... ..+.
T Consensus 76 gl~~~~~~~~~~~~d~vih~a~~~~~-~~~~~~~~~~nv~g~~~ll~~a~~~~-~~-~~v~iSS~-~v~~~~~~~~~~~~ 151 (367)
T TIGR01746 76 GLSDAEWERLAENVDTIVHNGALVNW-VYPYSELRAANVLGTREVLRLAASGR-AK-PLHYVSTI-SVLAAIDLSTVTED 151 (367)
T ss_pred CcCHHHHHHHHhhCCEEEeCCcEecc-CCcHHHHhhhhhHHHHHHHHHHhhCC-Cc-eEEEEccc-cccCCcCCCCcccc
Confidence 1233445789999999986432 23345567789999999999998764 22 35665542 111000 0000
Q ss_pred CC----CCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEec
Q 019990 145 AP----SIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGN 187 (332)
Q Consensus 145 ~~----~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~ 187 (332)
.. ...+...|+.++...+++....++. |++...+|...|+|+
T Consensus 152 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~ 197 (367)
T TIGR01746 152 DAIVTPPPGLAGGYAQSKWVAELLVREASDR-GLPVTIVRPGRILGN 197 (367)
T ss_pred ccccccccccCCChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeec
Confidence 00 0011124677788777777665554 899999999889996
No 149
>PRK08628 short chain dehydrogenase; Provisional
Probab=98.49 E-value=1.1e-06 Score=78.68 Aligned_cols=152 Identities=15% Similarity=0.080 Sum_probs=85.6
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHHh
Q 019990 3 KNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEAC 79 (332)
Q Consensus 3 ~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a~ 79 (332)
...++|+||||+|+||++++..|++.|. ++++++++.. .. ....++.... . ....|+....++.+.+
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~G~-------~v~~~~r~~~--~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 74 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEEGA-------IPVIFGRSAP--DD-EFAEELRALQPRAEFVQVDLTDDAQCRDAV 74 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHcCC-------cEEEEcCChh--hH-HHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence 3457899999999999999999998885 6788877542 22 2222332111 0 1123444333333333
Q ss_pred C-------CCcEEEEecCCCCCCC--CCh---hHHHhhhHHHHHHHHHHHHhhc-CCCcEEEEEeCChhhHHHHHHHHCC
Q 019990 80 K-------DVNIAVMVGGFPRKEG--MER---KDVMSKNVSIYKAQASALEKHA-APNCKVLVVANPANTNALILKEFAP 146 (332)
Q Consensus 80 ~-------~aDiVi~~ag~~~~~~--~~~---~~~~~~N~~~~~~i~~~i~~~~-~~~~~viv~snp~~~~~~~~~~~~~ 146 (332)
+ ..|+|||+||...... .+. ...+..|+.....+.+.+.++- ....+++++|+-... .
T Consensus 75 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~---------~ 145 (258)
T PRK08628 75 EQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTAL---------T 145 (258)
T ss_pred HHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhc---------c
Confidence 2 5799999998632211 111 2345667766656655554332 112455665542211 1
Q ss_pred CCCCCcEEEeecccHHHHHHHHHHHcC
Q 019990 147 SIPAKNITCLTRLDHNRAMGQISERLK 173 (332)
Q Consensus 147 ~~~~~~i~~~t~l~~~r~~~~~a~~~~ 173 (332)
+.+....|+.++.....+.+.+++.+.
T Consensus 146 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~ 172 (258)
T PRK08628 146 GQGGTSGYAAAKGAQLALTREWAVALA 172 (258)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence 122333567778777777777776543
No 150
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=98.48 E-value=2e-06 Score=76.95 Aligned_cols=167 Identities=14% Similarity=0.097 Sum_probs=94.1
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHHh-
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEAC- 79 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a~- 79 (332)
+.++|+||||+|+||++++..|++.|. +|++++++. +.+.....++.... . ....|++...++.+.+
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~ 81 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-------RVVLSARKA--EELEEAAAHLEALGIDALWIAADVADEADIERLAE 81 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence 457899999999999999999998875 788888753 22222222222110 0 1123444333332222
Q ss_pred ------CCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHHHhh---cCCCcEEEEEeCChhhHHHHHHHH
Q 019990 80 ------KDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEKH---AAPNCKVLVVANPANTNALILKEF 144 (332)
Q Consensus 80 ------~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i~~~---~~~~~~viv~snp~~~~~~~~~~~ 144 (332)
...|+|||+||..... ..+. .+.++.|+.....+.+++.++ ..+..+++++|+...... .
T Consensus 82 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~----~- 156 (259)
T PRK08213 82 ETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGG----N- 156 (259)
T ss_pred HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccC----C-
Confidence 3579999999863211 1111 234668888888888877654 112346666665321100 0
Q ss_pred CCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEec
Q 019990 145 APSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGN 187 (332)
Q Consensus 145 ~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~ 187 (332)
...+++...|+.++.....+...+++.+. +..++. +++.+
T Consensus 157 ~~~~~~~~~Y~~sKa~~~~~~~~~a~~~~--~~gi~v-~~v~P 196 (259)
T PRK08213 157 PPEVMDTIAYNTSKGAVINFTRALAAEWG--PHGIRV-NAIAP 196 (259)
T ss_pred CccccCcchHHHHHHHHHHHHHHHHHHhc--ccCEEE-EEEec
Confidence 00111223456677777777777777664 345664 34454
No 151
>PRK08264 short chain dehydrogenase; Validated
Probab=98.48 E-value=5e-07 Score=79.74 Aligned_cols=151 Identities=21% Similarity=0.148 Sum_probs=87.2
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHh-
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEAC- 79 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~- 79 (332)
|+.+.++|+||||+|+||++++..|++.|. .+|.+++++.. .+.. ..........|+....++.+.+
T Consensus 2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~------~~V~~~~r~~~--~~~~----~~~~~~~~~~D~~~~~~~~~~~~ 69 (238)
T PRK08264 2 MDIKGKVVLVTGANRGIGRAFVEQLLARGA------AKVYAAARDPE--SVTD----LGPRVVPLQLDVTDPASVAAAAE 69 (238)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCc------ccEEEEecChh--hhhh----cCCceEEEEecCCCHHHHHHHHH
Confidence 444667899999999999999999998774 16888887532 1211 1000001123343333333333
Q ss_pred --CCCcEEEEecCCCCCC----CCChh---HHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHHHCCCC
Q 019990 80 --KDVNIAVMVGGFPRKE----GMERK---DVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKEFAPSI 148 (332)
Q Consensus 80 --~~aDiVi~~ag~~~~~----~~~~~---~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~~~~~~ 148 (332)
...|+|||.+|..... ..+.+ ..++.|......+.+.+.... ....+++++|+.... .+.
T Consensus 70 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~---------~~~ 140 (238)
T PRK08264 70 AASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSW---------VNF 140 (238)
T ss_pred hcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhc---------cCC
Confidence 3579999999872211 11222 345667777767766654321 123466666653221 123
Q ss_pred CCCcEEEeecccHHHHHHHHHHHc
Q 019990 149 PAKNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 149 ~~~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
+....|+.++.....+...+++.+
T Consensus 141 ~~~~~y~~sK~a~~~~~~~l~~~~ 164 (238)
T PRK08264 141 PNLGTYSASKAAAWSLTQALRAEL 164 (238)
T ss_pred CCchHhHHHHHHHHHHHHHHHHHh
Confidence 333456777877777777777765
No 152
>PRK05993 short chain dehydrogenase; Provisional
Probab=98.48 E-value=8e-07 Score=80.62 Aligned_cols=145 Identities=8% Similarity=0.072 Sum_probs=85.4
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc-CCccceEEeCCHHHHh---
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF-PLLKGVVATTDVVEAC--- 79 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~a~--- 79 (332)
.+++|+||||+|+||++++..|++.|. +|++.+++. +.+. ++..... ....|++...++.+++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-------~Vi~~~r~~--~~~~----~l~~~~~~~~~~Dl~d~~~~~~~~~~~ 69 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-------RVFATCRKE--EDVA----ALEAEGLEAFQLDYAEPESIAALVAQV 69 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHH----HHHHCCceEEEccCCCHHHHHHHHHHH
Confidence 346799999999999999999998875 889998753 2222 1211111 1123444333332222
Q ss_pred -----CCCcEEEEecCCCCCC---CCCh---hHHHhhhHHH----HHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHH
Q 019990 80 -----KDVNIAVMVGGFPRKE---GMER---KDVMSKNVSI----YKAQASALEKHAAPNCKVLVVANPANTNALILKEF 144 (332)
Q Consensus 80 -----~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~----~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~ 144 (332)
...|+||+.||..... ..+. ...++.|+.. ++.+++.+++.+ ..++|++|+....
T Consensus 70 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~--~g~iv~isS~~~~-------- 139 (277)
T PRK05993 70 LELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG--QGRIVQCSSILGL-------- 139 (277)
T ss_pred HHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC--CCEEEEECChhhc--------
Confidence 2469999999864321 1222 2356677766 566677776653 3467777653211
Q ss_pred CCCCCCCcEEEeecccHHHHHHHHHHHc
Q 019990 145 APSIPAKNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 145 ~~~~~~~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
.+.+....|+.++.....+...++..+
T Consensus 140 -~~~~~~~~Y~asK~a~~~~~~~l~~el 166 (277)
T PRK05993 140 -VPMKYRGAYNASKFAIEGLSLTLRMEL 166 (277)
T ss_pred -CCCCccchHHHHHHHHHHHHHHHHHHh
Confidence 123334467778877777776666543
No 153
>PRK08263 short chain dehydrogenase; Provisional
Probab=98.48 E-value=5.2e-07 Score=81.70 Aligned_cols=148 Identities=14% Similarity=0.134 Sum_probs=82.2
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHH------
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEA------ 78 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a------ 78 (332)
+++|+||||+|+||++++..|++.+. +|.+.+++.. .+......+.........|+....++.+.
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-------~V~~~~r~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 73 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-------RVVATARDTA--TLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVE 73 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEECCHH--HHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHH
Confidence 35799999999999999999998875 7888887532 22211111110000011233332233222
Q ss_pred -hCCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHH----HHhhcCCCcEEEEEeCChhhHHHHHHHHCCC
Q 019990 79 -CKDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASA----LEKHAAPNCKVLVVANPANTNALILKEFAPS 147 (332)
Q Consensus 79 -~~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~----i~~~~~~~~~viv~snp~~~~~~~~~~~~~~ 147 (332)
+...|+|||+||..... ..+. ...++.|+.....+.+. +++.. ..++|++|+.... .+
T Consensus 74 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~iv~vsS~~~~---------~~ 142 (275)
T PRK08263 74 HFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR--SGHIIQISSIGGI---------SA 142 (275)
T ss_pred HcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CCEEEEEcChhhc---------CC
Confidence 23679999999874321 1122 23566787765555444 44432 2366666642111 12
Q ss_pred CCCCcEEEeecccHHHHHHHHHHHc
Q 019990 148 IPAKNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 148 ~~~~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
.+....|+.++.....+...++..+
T Consensus 143 ~~~~~~Y~~sKaa~~~~~~~la~e~ 167 (275)
T PRK08263 143 FPMSGIYHASKWALEGMSEALAQEV 167 (275)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHh
Confidence 2333356777776666666776664
No 154
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=98.48 E-value=1.5e-06 Score=76.76 Aligned_cols=168 Identities=15% Similarity=0.240 Sum_probs=91.5
Q ss_pred EEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhC-CCcEEE
Q 019990 8 VLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACK-DVNIAV 86 (332)
Q Consensus 8 I~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~-~aDiVi 86 (332)
|+||||+||||++|+..|...++ +|.++-++... .. .++ + ..+...+.+.+... ++|+||
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh-------~v~iltR~~~~--~~---~~~-~------~~v~~~~~~~~~~~~~~DavI 61 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGH-------QVTILTRRPPK--AS---QNL-H------PNVTLWEGLADALTLGIDAVI 61 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCC-------eEEEEEcCCcc--hh---hhc-C------ccccccchhhhcccCCCCEEE
Confidence 68999999999999999999886 78777765421 11 111 1 11111122333333 799999
Q ss_pred EecCCCC--C-CCCC-hhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhH----HHHHHHHCCCCCCCcEEEeec
Q 019990 87 MVGGFPR--K-EGME-RKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTN----ALILKEFAPSIPAKNITCLTR 158 (332)
Q Consensus 87 ~~ag~~~--~-~~~~-~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~----~~~~~~~~~~~~~~~i~~~t~ 158 (332)
++||.+- + .... ...+.+.-+..++.+.+.+.+.. ...++++.++-+..- ...+-+. + -+.+-+.+-.-
T Consensus 62 NLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~-~~P~~~isaSAvGyYG~~~~~~~tE~-~-~~g~~Fla~lc 138 (297)
T COG1090 62 NLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASE-TKPKVLISASAVGYYGHSGDRVVTEE-S-PPGDDFLAQLC 138 (297)
T ss_pred ECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhcc-CCCcEEEecceEEEecCCCceeeecC-C-CCCCChHHHHH
Confidence 9999752 1 2221 23345555788899999999764 233444444322210 0001110 0 01011111001
Q ss_pred ccHHHHHHHHHHHcCCCCCCeeeeEEEecCC---CceeecccC
Q 019990 159 LDHNRAMGQISERLKVHVSDVKNVIIWGNHS---STQYPDVNH 198 (332)
Q Consensus 159 l~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg---~~~v~~~s~ 198 (332)
.+=++.. .=|+.+|....-+|.-+|+|+.| ..+.|.|+.
T Consensus 139 ~~WE~~a-~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~ 180 (297)
T COG1090 139 QDWEEEA-LQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKL 180 (297)
T ss_pred HHHHHHH-hhhhhcCceEEEEEEEEEecCCCcchhhhcchhhh
Confidence 1111111 22456677777788888899665 467887774
No 155
>PRK06172 short chain dehydrogenase; Provisional
Probab=98.48 E-value=2.1e-06 Score=76.55 Aligned_cols=157 Identities=15% Similarity=0.061 Sum_probs=90.3
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHHhC
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEACK 80 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a~~ 80 (332)
..++|+||||+|+||++++..|++.|. +|++++++. +.+.....++.... . ....|+....++.+.++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~ 76 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-------KVVVADRDA--AGGEETVALIREAGGEALFVACDVTRDAEVKALVE 76 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence 457999999999999999999998875 789998764 22333233332211 0 11133333333333332
Q ss_pred -------CCcEEEEecCCCCCC----CCChh---HHHhhhHHHHHHHHH----HHHhhcCCCcEEEEEeCChhhHHHHHH
Q 019990 81 -------DVNIAVMVGGFPRKE----GMERK---DVMSKNVSIYKAQAS----ALEKHAAPNCKVLVVANPANTNALILK 142 (332)
Q Consensus 81 -------~aDiVi~~ag~~~~~----~~~~~---~~~~~N~~~~~~i~~----~i~~~~~~~~~viv~snp~~~~~~~~~ 142 (332)
..|+|||.+|..... ..+.+ ..+..|......+.+ .+.+. ....++++|+....
T Consensus 77 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~ii~~sS~~~~------ 148 (253)
T PRK06172 77 QTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQ--GGGAIVNTASVAGL------ 148 (253)
T ss_pred HHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCcEEEEECchhhc------
Confidence 459999999864221 12222 245667666544443 33332 23456666653211
Q ss_pred HHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeee
Q 019990 143 EFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNV 182 (332)
Q Consensus 143 ~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~ 182 (332)
.+.+....|+.++.....+...++..+. +..++..
T Consensus 149 ---~~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~~i~v~ 183 (253)
T PRK06172 149 ---GAAPKMSIYAASKHAVIGLTKSAAIEYA--KKGIRVN 183 (253)
T ss_pred ---cCCCCCchhHHHHHHHHHHHHHHHHHhc--ccCeEEE
Confidence 1233334578888877888888888764 4567643
No 156
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=98.47 E-value=1.2e-06 Score=77.82 Aligned_cols=150 Identities=15% Similarity=0.124 Sum_probs=84.4
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHHh--
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEAC-- 79 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a~-- 79 (332)
+++|+||||+|+||++++..|++.+. +|++++++. +.......++.... . ....|+....++.+++
T Consensus 3 ~~~ilItGas~~iG~~la~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 73 (250)
T TIGR03206 3 DKTAIVTGGGGGIGGATCRRFAEEGA-------KVAVFDLNR--EAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAA 73 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEecCCH--HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence 56899999999999999999999875 889998754 22222222332211 0 1112333322333332
Q ss_pred -----CCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHHHCC
Q 019990 80 -----KDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKEFAP 146 (332)
Q Consensus 80 -----~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~~~~ 146 (332)
...|+|||.+|..... ..+. ...++.|+.....+.+.+..+- .+..+++++++.... .
T Consensus 74 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~---------~ 144 (250)
T TIGR03206 74 AEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAAR---------V 144 (250)
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhc---------c
Confidence 3589999999863211 1122 2246678777766666554321 023466666652111 1
Q ss_pred CCCCCcEEEeecccHHHHHHHHHHHc
Q 019990 147 SIPAKNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 147 ~~~~~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
+.+....|+.++.....+.+.+++.+
T Consensus 145 ~~~~~~~Y~~sK~a~~~~~~~la~~~ 170 (250)
T TIGR03206 145 GSSGEAVYAACKGGLVAFSKTMAREH 170 (250)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 22223356667766666666677664
No 157
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.47 E-value=8.5e-07 Score=78.36 Aligned_cols=150 Identities=18% Similarity=0.157 Sum_probs=79.4
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHHh-
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEAC- 79 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a~- 79 (332)
++++|+||||+|++|++++..|++.+. ++.+...... +.......++.... . ....|+....++.+.+
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~-------~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 76 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGA-------DVVVHYRSDE-EAAEELVEAVEALGRRAQAVQADVTDKAALEAAVA 76 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------eEEEEeCCCH-HHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHH
Confidence 456899999999999999999999886 6655444321 12221112221110 0 1113343333333322
Q ss_pred ------CCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHHH----hhcCCCcEEEEEeCChhhHHHHHHH
Q 019990 80 ------KDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALE----KHAAPNCKVLVVANPANTNALILKE 143 (332)
Q Consensus 80 ------~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i~----~~~~~~~~viv~snp~~~~~~~~~~ 143 (332)
.+.|+|||++|..... +.+. .+.++.|+.....+.+.+. +.+ ..+++++|+-...
T Consensus 77 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~~i~~SS~~~~------- 147 (249)
T PRK12825 77 AAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR--GGRIVNISSVAGL------- 147 (249)
T ss_pred HHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CCEEEEECccccC-------
Confidence 4679999999863221 1122 2345667777766666663 332 2356666642211
Q ss_pred HCCCCCCCcEEEeecccHHHHHHHHHHHc
Q 019990 144 FAPSIPAKNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 144 ~~~~~~~~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
.+.+...-|+.++.....+...+++.+
T Consensus 148 --~~~~~~~~y~~sK~~~~~~~~~~~~~~ 174 (249)
T PRK12825 148 --PGWPGRSNYAAAKAGLVGLTKALAREL 174 (249)
T ss_pred --CCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 112222234455555555666666653
No 158
>PRK07478 short chain dehydrogenase; Provisional
Probab=98.47 E-value=3.5e-06 Score=75.19 Aligned_cols=160 Identities=14% Similarity=0.127 Sum_probs=93.2
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHH
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVE 77 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~ 77 (332)
|..+.++++||||+|.||.+++..|++.|. +|.+.+++. +.+.....++.+.. . ....|+....++.+
T Consensus 2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 72 (254)
T PRK07478 2 MRLNGKVAIITGASSGIGRAAAKLFAREGA-------KVVVGARRQ--AELDQLVAEIRAEGGEAVALAGDVRDEAYAKA 72 (254)
T ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Confidence 334557899999999999999999999885 788888753 23333333332211 0 11124433333333
Q ss_pred Hh-------CCCcEEEEecCCCC--CC--CCCh---hHHHhhhHHHH----HHHHHHHHhhcCCCcEEEEEeCChhhHHH
Q 019990 78 AC-------KDVNIAVMVGGFPR--KE--GMER---KDVMSKNVSIY----KAQASALEKHAAPNCKVLVVANPANTNAL 139 (332)
Q Consensus 78 a~-------~~aDiVi~~ag~~~--~~--~~~~---~~~~~~N~~~~----~~i~~~i~~~~~~~~~viv~snp~~~~~~ 139 (332)
.+ ...|++|+.||... .+ ..+. ...+..|.... +.+++.+.+. ...+++++|+....
T Consensus 73 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~--~~~~iv~~sS~~~~--- 147 (254)
T PRK07478 73 LVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR--GGGSLIFTSTFVGH--- 147 (254)
T ss_pred HHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCceEEEEechHhh---
Confidence 22 36799999998632 11 1222 23466776533 4445555443 23466766653211
Q ss_pred HHHHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 140 ILKEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 140 ~~~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
. .+.+....|+.+|.....+...+++.++ +..|+.
T Consensus 148 ---~--~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v 182 (254)
T PRK07478 148 ---T--AGFPGMAAYAASKAGLIGLTQVLAAEYG--AQGIRV 182 (254)
T ss_pred ---c--cCCCCcchhHHHHHHHHHHHHHHHHHHh--hcCEEE
Confidence 0 1233344688888888888888888765 345664
No 159
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=98.46 E-value=2.2e-06 Score=73.11 Aligned_cols=111 Identities=24% Similarity=0.368 Sum_probs=66.8
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCC--------------ccceEE
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPL--------------LKGVVA 71 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~--------------~~~v~~ 71 (332)
|||+|+| .|++|..+|..|...|+ +|..+|++. ++.. .+.....+. .+++..
T Consensus 1 M~I~ViG-lGyvGl~~A~~lA~~G~-------~V~g~D~~~--~~v~----~l~~g~~p~~E~~l~~ll~~~~~~~~l~~ 66 (185)
T PF03721_consen 1 MKIAVIG-LGYVGLPLAAALAEKGH-------QVIGVDIDE--EKVE----ALNNGELPIYEPGLDELLKENVSAGRLRA 66 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTS-------EEEEE-S-H--HHHH----HHHTTSSSS-CTTHHHHHHHHHHTTSEEE
T ss_pred CEEEEEC-CCcchHHHHHHHHhCCC-------EEEEEeCCh--HHHH----HHhhccccccccchhhhhccccccccchh
Confidence 6899999 89999999999999986 899999864 2222 222221110 257788
Q ss_pred eCCHHHHhCCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeC-Chhh
Q 019990 72 TTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVAN-PANT 136 (332)
Q Consensus 72 ~~~~~~a~~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~sn-p~~~ 136 (332)
+++..++++++|++|++.+.|...+. ..+...+.+.++.+.++..++..+++=|. |+..
T Consensus 67 t~~~~~ai~~adv~~I~VpTP~~~~~------~~Dls~v~~a~~~i~~~l~~~~lvV~~STvppGt 126 (185)
T PF03721_consen 67 TTDIEEAIKDADVVFICVPTPSDEDG------SPDLSYVESAIESIAPVLRPGDLVVIESTVPPGT 126 (185)
T ss_dssp ESEHHHHHHH-SEEEE----EBETTT------SBETHHHHHHHHHHHHHHCSCEEEEESSSSSTTH
T ss_pred hhhhhhhhhccceEEEecCCCccccC------CccHHHHHHHHHHHHHHHhhcceEEEccEEEEee
Confidence 88888889999999999887754421 12345556666777666544445455443 5543
No 160
>PRK07856 short chain dehydrogenase; Provisional
Probab=98.46 E-value=1e-06 Score=78.56 Aligned_cols=149 Identities=10% Similarity=0.020 Sum_probs=89.3
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc-CCccceEEeCCHHHHh
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF-PLLKGVVATTDVVEAC 79 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~a~ 79 (332)
|..+.++++||||+|.||++++..|++.+. +|++++++.. . ....... ....|+....++.+.+
T Consensus 2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~-------~v~~~~r~~~--~------~~~~~~~~~~~~D~~~~~~~~~~~ 66 (252)
T PRK07856 2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGA-------TVVVCGRRAP--E------TVDGRPAEFHAADVRDPDQVAALV 66 (252)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCChh--h------hhcCCceEEEEccCCCHHHHHHHH
Confidence 445568899999999999999999998875 7888987531 1 0000000 1112333333333333
Q ss_pred -------CCCcEEEEecCCCCC-C--CCCh---hHHHhhhHHHHHHHHHHHHhhc---CCCcEEEEEeCChhhHHHHHHH
Q 019990 80 -------KDVNIAVMVGGFPRK-E--GMER---KDVMSKNVSIYKAQASALEKHA---APNCKVLVVANPANTNALILKE 143 (332)
Q Consensus 80 -------~~aDiVi~~ag~~~~-~--~~~~---~~~~~~N~~~~~~i~~~i~~~~---~~~~~viv~snp~~~~~~~~~~ 143 (332)
...|+|||.||.... + ..+. ...+..|+.....+.+.+..+- ....++|++|+....
T Consensus 67 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~------- 139 (252)
T PRK07856 67 DAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGR------- 139 (252)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccC-------
Confidence 356999999986321 1 1111 2356778777777766654421 122466776653211
Q ss_pred HCCCCCCCcEEEeecccHHHHHHHHHHHcC
Q 019990 144 FAPSIPAKNITCLTRLDHNRAMGQISERLK 173 (332)
Q Consensus 144 ~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~ 173 (332)
.+.+....|+.++.....+...++..++
T Consensus 140 --~~~~~~~~Y~~sK~a~~~l~~~la~e~~ 167 (252)
T PRK07856 140 --RPSPGTAAYGAAKAGLLNLTRSLAVEWA 167 (252)
T ss_pred --CCCCCCchhHHHHHHHHHHHHHHHHHhc
Confidence 1233334678888888888888888776
No 161
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.45 E-value=2e-06 Score=76.01 Aligned_cols=150 Identities=13% Similarity=0.147 Sum_probs=84.3
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHHh--
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEAC-- 79 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a~-- 79 (332)
+++++||||+|++|.+++..|++.|. +|++++++.. .+.....++.... . ....|+....++.+++
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~~G~-------~Vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 77 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAKEGV-------NVGLLARTEE--NLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQ 77 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC-------EEEEEeCCHH--HHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHH
Confidence 46899999999999999999998885 7999998532 2222222222110 0 1122333333333333
Q ss_pred -----CCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHHHCC
Q 019990 80 -----KDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKEFAP 146 (332)
Q Consensus 80 -----~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~~~~ 146 (332)
.++|+|||++|..... +.+. ...++.|+.....+.+.+..+. ....+++++++.... .
T Consensus 78 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~---------~ 148 (239)
T PRK07666 78 LKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQ---------K 148 (239)
T ss_pred HHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhc---------c
Confidence 3789999999864321 1121 2346677776666666554321 112456666654321 1
Q ss_pred CCCCCcEEEeecccHHHHHHHHHHHc
Q 019990 147 SIPAKNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 147 ~~~~~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
+.+....|+.++.....+...+++.+
T Consensus 149 ~~~~~~~Y~~sK~a~~~~~~~~a~e~ 174 (239)
T PRK07666 149 GAAVTSAYSASKFGVLGLTESLMQEV 174 (239)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHh
Confidence 22333345666665556666666654
No 162
>PRK08643 acetoin reductase; Validated
Probab=98.45 E-value=4.6e-06 Score=74.46 Aligned_cols=156 Identities=17% Similarity=0.188 Sum_probs=88.1
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc---cCCccceEEeCCHHHHh---
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA---FPLLKGVVATTDVVEAC--- 79 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~---~~~~~~v~~~~~~~~a~--- 79 (332)
++++||||+|+||++++..|++.|. +++++|++. +.+.....++.+.. .....|+....++.+.+
T Consensus 3 k~~lItGas~giG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 73 (256)
T PRK08643 3 KVALVTGAGQGIGFAIAKRLVEDGF-------KVAIVDYNE--ETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQV 73 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence 5799999999999999999998875 889998753 22322222332211 01123444333333322
Q ss_pred ----CCCcEEEEecCCCCC-C--CCCh---hHHHhhhHHHHHHHHHHHHhhc---CCCcEEEEEeCChhhHHHHHHHHCC
Q 019990 80 ----KDVNIAVMVGGFPRK-E--GMER---KDVMSKNVSIYKAQASALEKHA---APNCKVLVVANPANTNALILKEFAP 146 (332)
Q Consensus 80 ----~~aDiVi~~ag~~~~-~--~~~~---~~~~~~N~~~~~~i~~~i~~~~---~~~~~viv~snp~~~~~~~~~~~~~ 146 (332)
.+.|+|||+||.... + ..+. ...+..|+.....+.+.+.++- ..+.+++++|+.... .
T Consensus 74 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~---------~ 144 (256)
T PRK08643 74 VDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGV---------V 144 (256)
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccc---------c
Confidence 368999999986421 1 1111 2345667765544444443321 123566777653221 1
Q ss_pred CCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 147 SIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 147 ~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
+.+....|+.++.....+.+.+++.+ .+..++.
T Consensus 145 ~~~~~~~Y~~sK~a~~~~~~~la~e~--~~~gi~v 177 (256)
T PRK08643 145 GNPELAVYSSTKFAVRGLTQTAARDL--ASEGITV 177 (256)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHh--cccCcEE
Confidence 22323357778877777777777765 3445653
No 163
>PRK12744 short chain dehydrogenase; Provisional
Probab=98.45 E-value=4.2e-06 Score=74.84 Aligned_cols=159 Identities=11% Similarity=0.063 Sum_probs=90.3
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEeccc--chhhhhhhHhhhhhh--cc-CCccceEEeCCHHHH
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEP--AAEALNGVKMELIDA--AF-PLLKGVVATTDVVEA 78 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~--~~~~~~~~~~dl~~~--~~-~~~~~v~~~~~~~~a 78 (332)
+.++++||||+|+||.+++..|++.|. ++++++.+. ..+.+.....++... .. ....|+....++.+.
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~-------~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~ 79 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGA-------KAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKL 79 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-------cEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHH
Confidence 457899999999999999999998875 655555422 111222222222211 11 112344443333333
Q ss_pred h-------CCCcEEEEecCCCCC---CCCCh---hHHHhhhHHHHHHHHHHHHhhcCCCcEEEEE-eCChhhHHHHHHHH
Q 019990 79 C-------KDVNIAVMVGGFPRK---EGMER---KDVMSKNVSIYKAQASALEKHAAPNCKVLVV-ANPANTNALILKEF 144 (332)
Q Consensus 79 ~-------~~aDiVi~~ag~~~~---~~~~~---~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~-snp~~~~~~~~~~~ 144 (332)
+ ...|++||.||.... ...+. ...+..|+.....+++++...-.+...++++ ++....
T Consensus 80 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~-------- 151 (257)
T PRK12744 80 FDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGA-------- 151 (257)
T ss_pred HHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcc--------
Confidence 2 367999999987321 11222 2345678776666666665442223344443 332211
Q ss_pred CCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 145 APSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 145 ~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
..+....|+.+|.....+.+.+++.++ +..|+.
T Consensus 152 --~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~~i~v 184 (257)
T PRK12744 152 --FTPFYSAYAGSKAPVEHFTRAASKEFG--ARGISV 184 (257)
T ss_pred --cCCCcccchhhHHHHHHHHHHHHHHhC--cCceEE
Confidence 112233678899999999999998876 345664
No 164
>PRK07102 short chain dehydrogenase; Provisional
Probab=98.45 E-value=2.6e-06 Score=75.55 Aligned_cols=150 Identities=13% Similarity=0.072 Sum_probs=86.3
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh---cc-CCccceEEeCCHHHHhC
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA---AF-PLLKGVVATTDVVEACK 80 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~---~~-~~~~~v~~~~~~~~a~~ 80 (332)
|++|+||||+|+||++++..|++.|. +|.++|++. +.......++... .. ....|+....++.+.++
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 71 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGA-------RLYLAARDV--ERLERLADDLRARGAVAVSTHELDILDTASHAAFLD 71 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCC-------EEEEEeCCH--HHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHH
Confidence 46899999999999999999998875 788898864 2232222222211 00 11234444444433332
Q ss_pred ----CCcEEEEecCCCCC---CCCChh---HHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHHHCCCC
Q 019990 81 ----DVNIAVMVGGFPRK---EGMERK---DVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKEFAPSI 148 (332)
Q Consensus 81 ----~aDiVi~~ag~~~~---~~~~~~---~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~~~~~~ 148 (332)
..|+||+.+|.... .+.+.+ +.++.|......+.+.+..+. .....++++|+.... .+.
T Consensus 72 ~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~---------~~~ 142 (243)
T PRK07102 72 SLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGD---------RGR 142 (243)
T ss_pred HHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEeccccc---------CCC
Confidence 46999999886321 112222 346677777666666655431 123466766653211 112
Q ss_pred CCCcEEEeecccHHHHHHHHHHHc
Q 019990 149 PAKNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 149 ~~~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
+..-.|+.++.....+...++..+
T Consensus 143 ~~~~~Y~~sK~a~~~~~~~l~~el 166 (243)
T PRK07102 143 ASNYVYGSAKAALTAFLSGLRNRL 166 (243)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHh
Confidence 222357777776666766666654
No 165
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=98.45 E-value=1.5e-06 Score=77.28 Aligned_cols=159 Identities=13% Similarity=0.097 Sum_probs=91.0
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc---cCCccceEEeCCHHH
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA---FPLLKGVVATTDVVE 77 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~---~~~~~~v~~~~~~~~ 77 (332)
|+.+.++|+||||+|+||++++..|++.|. +|++++++.. +.+ ...+.... .....|++...++.+
T Consensus 1 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~-------~vi~~~r~~~-~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~ 69 (248)
T TIGR01832 1 FSLEGKVALVTGANTGLGQGIAVGLAEAGA-------DIVGAGRSEP-SET---QQQVEALGRRFLSLTADLSDIEAIKA 69 (248)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEcCchH-HHH---HHHHHhcCCceEEEECCCCCHHHHHH
Confidence 455678999999999999999999999886 7888887431 111 11121111 011234433333322
Q ss_pred H-------hCCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHHHhhc---CCCcEEEEEeCChhhHHHHH
Q 019990 78 A-------CKDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEKHA---APNCKVLVVANPANTNALIL 141 (332)
Q Consensus 78 a-------~~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i~~~~---~~~~~viv~snp~~~~~~~~ 141 (332)
. ....|++||.||..... ..+. .+.++.|......+.+.+...- ....+++++|+-.. +
T Consensus 70 ~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~---~-- 144 (248)
T TIGR01832 70 LVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLS---F-- 144 (248)
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHh---c--
Confidence 2 24689999999874321 1111 2346677766656665554321 11356666664211 1
Q ss_pred HHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 142 KEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 142 ~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.++.....+.+.+++.+. +..|+.
T Consensus 145 ----~~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~gi~v 178 (248)
T TIGR01832 145 ----QGGIRVPSYTASKHGVAGLTKLLANEWA--AKGINV 178 (248)
T ss_pred ----cCCCCCchhHHHHHHHHHHHHHHHHHhC--ccCcEE
Confidence 1122233577788877788888888764 344553
No 166
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.45 E-value=1.4e-06 Score=77.02 Aligned_cols=162 Identities=15% Similarity=0.142 Sum_probs=88.7
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHH
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVE 77 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~ 77 (332)
|..++++|+||||+|++|++++..|++.|. ++++...+.. +.......++.... . ....|+....++.+
T Consensus 1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~-------~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~ 72 (248)
T PRK05557 1 MSLEGKVALVTGASRGIGRAIAERLAAQGA-------NVVINYASSE-AGAEALVAEIGALGGKALAVQGDVSDAESVER 72 (248)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCch-hHHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence 566778999999999999999999998875 6766655432 11222222222110 0 11123333323323
Q ss_pred Hh-------CCCcEEEEecCCCCCC---CCChh---HHHhhhHHHHHHHHHHHHhhcC--CCcEEEEEeCChhhHHHHHH
Q 019990 78 AC-------KDVNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKAQASALEKHAA--PNCKVLVVANPANTNALILK 142 (332)
Q Consensus 78 a~-------~~aDiVi~~ag~~~~~---~~~~~---~~~~~N~~~~~~i~~~i~~~~~--~~~~viv~snp~~~~~~~~~ 142 (332)
++ .+.|+|||++|..... ..+.. ..+..|+.....+.+.+..+.. ...+++++|+....
T Consensus 73 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~------ 146 (248)
T PRK05557 73 AVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGL------ 146 (248)
T ss_pred HHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccC------
Confidence 22 3689999999864321 11221 2355677777777777765421 12356666643211
Q ss_pred HHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 143 EFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 143 ~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.++.....+...+++.+. ...++.
T Consensus 147 ---~~~~~~~~y~~sk~a~~~~~~~~a~~~~--~~~i~~ 180 (248)
T PRK05557 147 ---MGNPGQANYAASKAGVIGFTKSLARELA--SRGITV 180 (248)
T ss_pred ---cCCCCCchhHHHHHHHHHHHHHHHHHhh--hhCeEE
Confidence 1122223456666666666666776653 334553
No 167
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.45 E-value=1.4e-06 Score=77.07 Aligned_cols=161 Identities=17% Similarity=0.156 Sum_probs=86.5
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEE-ecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHH
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHML-DIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVV 76 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~-D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~ 76 (332)
|...+++|+||||+|+||++++..|++.+. ++++. +++. +........+.... . ....|+....++.
T Consensus 1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~-------~v~~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 71 (247)
T PRK05565 1 MKLMGKVAIVTGASGGIGRAIAELLAKEGA-------KVVIAYDINE--EAAQELLEEIKEEGGDAIAVKADVSSEEDVE 71 (247)
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEcCCCH--HHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 555677999999999999999999998875 67777 7753 22222222222110 0 1112343333333
Q ss_pred HHhC-------CCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHHHhhcC--CCcEEEEEeCChhhHHHHH
Q 019990 77 EACK-------DVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEKHAA--PNCKVLVVANPANTNALIL 141 (332)
Q Consensus 77 ~a~~-------~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i~~~~~--~~~~viv~snp~~~~~~~~ 141 (332)
+.++ +.|+|||.+|..... ..+. ...+..|......+.+.+..... ...+++++|+....
T Consensus 72 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~----- 146 (247)
T PRK05565 72 NLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGL----- 146 (247)
T ss_pred HHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhc-----
Confidence 3332 689999999864211 1122 23456677766556555544321 12356666653221
Q ss_pred HHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 142 KEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 142 ~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.++.....+...+++.+. ...++.
T Consensus 147 ----~~~~~~~~y~~sK~a~~~~~~~~~~~~~--~~gi~~ 180 (247)
T PRK05565 147 ----IGASCEVLYSASKGAVNAFTKALAKELA--PSGIRV 180 (247)
T ss_pred ----cCCCCccHHHHHHHHHHHHHHHHHHHHH--HcCeEE
Confidence 1112222455566555556566666543 345553
No 168
>PRK07814 short chain dehydrogenase; Provisional
Probab=98.45 E-value=1.7e-06 Score=77.78 Aligned_cols=152 Identities=13% Similarity=0.032 Sum_probs=90.0
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--cC-CccceEEeCCHHHH--
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--FP-LLKGVVATTDVVEA-- 78 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~~-~~~~v~~~~~~~~a-- 78 (332)
+.++++||||+|+||.+++..|++.|. +|++++++. +.+.....++.... .. ...|++...++.++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~ 79 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-------DVLIAARTE--SQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAG 79 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence 457899999999999999999998875 899999853 22332222232110 00 11233333233322
Q ss_pred -----hCCCcEEEEecCCCCCC---CCC---hhHHHhhhHHHHHHHHHHHHhhc---CCCcEEEEEeCChhhHHHHHHHH
Q 019990 79 -----CKDVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEKHA---APNCKVLVVANPANTNALILKEF 144 (332)
Q Consensus 79 -----~~~aDiVi~~ag~~~~~---~~~---~~~~~~~N~~~~~~i~~~i~~~~---~~~~~viv~snp~~~~~~~~~~~ 144 (332)
+...|+|||.||..... ..+ ....+..|......+.+.+..+- ....+++++|+....
T Consensus 80 ~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~-------- 151 (263)
T PRK07814 80 QAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGR-------- 151 (263)
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEcccccc--------
Confidence 23689999999863211 111 12345677777777777665421 123566776653221
Q ss_pred CCCCCCCcEEEeecccHHHHHHHHHHHcC
Q 019990 145 APSIPAKNITCLTRLDHNRAMGQISERLK 173 (332)
Q Consensus 145 ~~~~~~~~i~~~t~l~~~r~~~~~a~~~~ 173 (332)
.+.+....|+.++.....+...++..+.
T Consensus 152 -~~~~~~~~Y~~sK~a~~~~~~~~~~e~~ 179 (263)
T PRK07814 152 -LAGRGFAAYGTAKAALAHYTRLAALDLC 179 (263)
T ss_pred -CCCCCCchhHHHHHHHHHHHHHHHHHHC
Confidence 1223334678888877788888887765
No 169
>PRK06197 short chain dehydrogenase; Provisional
Probab=98.45 E-value=1.8e-06 Score=79.49 Aligned_cols=159 Identities=13% Similarity=0.056 Sum_probs=90.4
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh----cc-CCccceEEeCCHHHH
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA----AF-PLLKGVVATTDVVEA 78 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~----~~-~~~~~v~~~~~~~~a 78 (332)
..++|+||||+|+||++++..|++.|. ++++++++. +.......++... .. ....|+....++.++
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-------~vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~ 85 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-------HVVLAVRNL--DKGKAAAARITAATPGADVTLQELDLTSLASVRAA 85 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHH
Confidence 346899999999999999999998875 788888753 2222222223211 00 112344433333332
Q ss_pred h-------CCCcEEEEecCCCCCCC-C---ChhHHHhhhHHH----HHHHHHHHHhhcCCCcEEEEEeCChhhH-HHH-H
Q 019990 79 C-------KDVNIAVMVGGFPRKEG-M---ERKDVMSKNVSI----YKAQASALEKHAAPNCKVLVVANPANTN-ALI-L 141 (332)
Q Consensus 79 ~-------~~aDiVi~~ag~~~~~~-~---~~~~~~~~N~~~----~~~i~~~i~~~~~~~~~viv~snp~~~~-~~~-~ 141 (332)
+ ...|+|||.||...... . .-...+..|... ++.+++.+++.. ..++|++|+..... ... .
T Consensus 86 ~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~--~~~iV~vSS~~~~~~~~~~~ 163 (306)
T PRK06197 86 ADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP--GSRVVTVSSGGHRIRAAIHF 163 (306)
T ss_pred HHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC--CCEEEEECCHHHhccCCCCc
Confidence 2 35899999998632211 1 112346677665 566666666543 35777777532110 000 0
Q ss_pred HHH--CCCCCCCcEEEeecccHHHHHHHHHHHcC
Q 019990 142 KEF--APSIPAKNITCLTRLDHNRAMGQISERLK 173 (332)
Q Consensus 142 ~~~--~~~~~~~~i~~~t~l~~~r~~~~~a~~~~ 173 (332)
... ...+++...|+.+|.....+...+++.+.
T Consensus 164 ~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~ 197 (306)
T PRK06197 164 DDLQWERRYNRVAAYGQSKLANLLFTYELQRRLA 197 (306)
T ss_pred cccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence 000 01123334578888888888888888875
No 170
>PRK05876 short chain dehydrogenase; Provisional
Probab=98.44 E-value=8.5e-07 Score=80.46 Aligned_cols=150 Identities=15% Similarity=0.103 Sum_probs=85.9
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc---CCccceEEeCCHHHHh-
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF---PLLKGVVATTDVVEAC- 79 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~---~~~~~v~~~~~~~~a~- 79 (332)
+.+.++||||+|+||++++..|++.|. +|++.|++. +.+.....++..... ....|++...++.+.+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-------~Vv~~~r~~--~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~ 75 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-------RVVLGDVDK--PGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLAD 75 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence 356799999999999999999999885 788998764 233333333322110 1123444433443333
Q ss_pred ------CCCcEEEEecCCCCC---CCCChh---HHHhhhHHHHHHHHHHHH----hhcCCCcEEEEEeCChhhHHHHHHH
Q 019990 80 ------KDVNIAVMVGGFPRK---EGMERK---DVMSKNVSIYKAQASALE----KHAAPNCKVLVVANPANTNALILKE 143 (332)
Q Consensus 80 ------~~aDiVi~~ag~~~~---~~~~~~---~~~~~N~~~~~~i~~~i~----~~~~~~~~viv~snp~~~~~~~~~~ 143 (332)
...|++||.||.... ...+.+ ..++.|+.....+.+.+. +.+ ..++++++|+....
T Consensus 76 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~-~~g~iv~isS~~~~------- 147 (275)
T PRK05876 76 EAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQG-TGGHVVFTASFAGL------- 147 (275)
T ss_pred HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCCEEEEeCChhhc-------
Confidence 247999999987421 112222 245677766666555543 332 13466666653211
Q ss_pred HCCCCCCCcEEEeecccHHHHHHHHHHHc
Q 019990 144 FAPSIPAKNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 144 ~~~~~~~~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
.+.+....|+.+|.....+...++..+
T Consensus 148 --~~~~~~~~Y~asK~a~~~~~~~l~~e~ 174 (275)
T PRK05876 148 --VPNAGLGAYGVAKYGVVGLAETLAREV 174 (275)
T ss_pred --cCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence 123333456777766555555666554
No 171
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=98.44 E-value=1.1e-05 Score=75.03 Aligned_cols=110 Identities=22% Similarity=0.260 Sum_probs=74.5
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccC------------C--ccceEE
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFP------------L--LKGVVA 71 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~------------~--~~~v~~ 71 (332)
|||+|+| +|+||...+..|.+.|+ +|+++|++.. +.. .|.....| . .+.+..
T Consensus 1 MkI~viG-tGYVGLv~g~~lA~~GH-------eVv~vDid~~--KV~----~ln~g~~PI~EpgLe~ll~~~~~~gRl~f 66 (414)
T COG1004 1 MKITVIG-TGYVGLVTGACLAELGH-------EVVCVDIDES--KVE----LLNKGISPIYEPGLEELLKENLASGRLRF 66 (414)
T ss_pred CceEEEC-CchHHHHHHHHHHHcCC-------eEEEEeCCHH--HHH----HHhCCCCCCcCccHHHHHHhccccCcEEE
Confidence 6899999 89999999999999886 9999999642 222 22222111 1 134888
Q ss_pred eCCHHHHhCCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEe-CChh
Q 019990 72 TTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVA-NPAN 135 (332)
Q Consensus 72 ~~~~~~a~~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~s-np~~ 135 (332)
++|..++++++|++|++.|.|.++..+ .+...+..+++.+.++-.....+|+=| =|+.
T Consensus 67 Ttd~~~a~~~adv~fIavgTP~~~dg~------aDl~~V~ava~~i~~~~~~~~vvV~KSTVPvG 125 (414)
T COG1004 67 TTDYEEAVKDADVVFIAVGTPPDEDGS------ADLSYVEAVAKDIGEILDGKAVVVIKSTVPVG 125 (414)
T ss_pred EcCHHHHHhcCCEEEEEcCCCCCCCCC------ccHHHHHHHHHHHHhhcCCCeEEEEcCCCCCC
Confidence 899999999999999999988765221 125566677777777642223333333 2554
No 172
>PRK07825 short chain dehydrogenase; Provisional
Probab=98.44 E-value=1.1e-06 Score=79.42 Aligned_cols=158 Identities=16% Similarity=0.076 Sum_probs=88.7
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHH---
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVE--- 77 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~--- 77 (332)
|+.+.++|+||||+|.||++++..|++.|. .+.+.+++. +.+.....++.... ....|+....++.+
T Consensus 1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~ 70 (273)
T PRK07825 1 DDLRGKVVAITGGARGIGLATARALAALGA-------RVAIGDLDE--ALAKETAAELGLVV-GGPLDVTDPASFAAFLD 70 (273)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHhccce-EEEccCCCHHHHHHHHH
Confidence 666778999999999999999999998875 788888753 23332222222110 11224433333222
Q ss_pred ----HhCCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHH----HHHHHhhcCCCcEEEEEeCChhhHHHHHHH
Q 019990 78 ----ACKDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQ----ASALEKHAAPNCKVLVVANPANTNALILKE 143 (332)
Q Consensus 78 ----a~~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i----~~~i~~~~~~~~~viv~snp~~~~~~~~~~ 143 (332)
.+.+.|++|+.||..... ..+. ...++.|+.....+ ++.+.+.+ ..+++++|+....
T Consensus 71 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~--~g~iv~isS~~~~------- 141 (273)
T PRK07825 71 AVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG--RGHVVNVASLAGK------- 141 (273)
T ss_pred HHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CCEEEEEcCcccc-------
Confidence 234679999999874321 1121 23456676554444 44444432 3467777753221
Q ss_pred HCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 144 FAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 144 ~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.+|.....+...++..+. +..++.
T Consensus 142 --~~~~~~~~Y~asKaa~~~~~~~l~~el~--~~gi~v 175 (273)
T PRK07825 142 --IPVPGMATYCASKHAVVGFTDAARLELR--GTGVHV 175 (273)
T ss_pred --CCCCCCcchHHHHHHHHHHHHHHHHHhh--ccCcEE
Confidence 1233333567777666666666666543 344553
No 173
>PRK07985 oxidoreductase; Provisional
Probab=98.44 E-value=8.1e-07 Score=81.43 Aligned_cols=151 Identities=14% Similarity=0.059 Sum_probs=87.3
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHH-----
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVE----- 77 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~----- 77 (332)
++++||||+|+||++++..|++.|. +|++.+++...+........+.... . ....|+....++.+
T Consensus 50 k~vlITGas~gIG~aia~~L~~~G~-------~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 122 (294)
T PRK07985 50 RKALVTGGDSGIGRAAAIAYAREGA-------DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEA 122 (294)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCC-------EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHH
Confidence 6899999999999999999999885 7888775432122221111111110 0 11123333222222
Q ss_pred --HhCCCcEEEEecCCCCC----CCCChh---HHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCC
Q 019990 78 --ACKDVNIAVMVGGFPRK----EGMERK---DVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSI 148 (332)
Q Consensus 78 --a~~~aDiVi~~ag~~~~----~~~~~~---~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~ 148 (332)
.+...|++||.||.... ...+.. ..++.|+.....+++++..+-...+++|++|+.... .+.
T Consensus 123 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~---------~~~ 193 (294)
T PRK07985 123 HKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAY---------QPS 193 (294)
T ss_pred HHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhc---------cCC
Confidence 23457999999986321 112222 346778877777777776542234567777753211 122
Q ss_pred CCCcEEEeecccHHHHHHHHHHHc
Q 019990 149 PAKNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 149 ~~~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
+....|+.+|.....+...+++.+
T Consensus 194 ~~~~~Y~asKaal~~l~~~la~el 217 (294)
T PRK07985 194 PHLLDYAATKAAILNYSRGLAKQV 217 (294)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHH
Confidence 222357778877777777787775
No 174
>PRK12747 short chain dehydrogenase; Provisional
Probab=98.44 E-value=5.1e-06 Score=74.05 Aligned_cols=159 Identities=16% Similarity=0.135 Sum_probs=90.1
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc---cCCccceEEeCCHH----
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA---FPLLKGVVATTDVV---- 76 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~---~~~~~~v~~~~~~~---- 76 (332)
+.++++||||+|+||++++..|++.|. ++.+.+.+.. +.+.....++.... .....|+....+..
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-------~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 74 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-------LVAIHYGNRK-EEAEETVYEIQSNGGSAFSIGANLESLHGVEALYS 74 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-------eEEEEcCCCH-HHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHH
Confidence 456899999999999999999998885 6777653221 22222222332110 00111222211111
Q ss_pred ---HHh------CCCcEEEEecCCCCC---CCCCh---hHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHH
Q 019990 77 ---EAC------KDVNIAVMVGGFPRK---EGMER---KDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALIL 141 (332)
Q Consensus 77 ---~a~------~~aDiVi~~ag~~~~---~~~~~---~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~ 141 (332)
+.+ ...|++||.||.... ...+. ...++.|+.....+++++...-...+++|++|+....
T Consensus 75 ~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~----- 149 (252)
T PRK12747 75 SLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATR----- 149 (252)
T ss_pred HHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccc-----
Confidence 111 268999999986321 11222 2345678777766666655442233577777753221
Q ss_pred HHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 142 KEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 142 ~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.+|.....+.+.+++.++ +..+|.
T Consensus 150 ----~~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~girv 183 (252)
T PRK12747 150 ----ISLPDFIAYSMTKGAINTMTFTLAKQLG--ARGITV 183 (252)
T ss_pred ----cCCCCchhHHHHHHHHHHHHHHHHHHHh--HcCCEE
Confidence 1223334678888888888888888765 344553
No 175
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=98.43 E-value=1.1e-06 Score=74.40 Aligned_cols=145 Identities=21% Similarity=0.208 Sum_probs=87.9
Q ss_pred EEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcEEEE
Q 019990 8 VLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVM 87 (332)
Q Consensus 8 I~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDiVi~ 87 (332)
|+|+||+|++|+.++..|++.+. +|+++-++.. ++.. .........++....++.++++++|+||+
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-------~V~~~~R~~~--~~~~-----~~~~~~~~~d~~d~~~~~~al~~~d~vi~ 66 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-------EVTALVRSPS--KAED-----SPGVEIIQGDLFDPDSVKAALKGADAVIH 66 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-------EEEEEESSGG--GHHH-----CTTEEEEESCTTCHHHHHHHHTTSSEEEE
T ss_pred eEEECCCChHHHHHHHHHHHCCC-------EEEEEecCch--hccc-----ccccccceeeehhhhhhhhhhhhcchhhh
Confidence 78999999999999999999885 8888887542 2221 11001112344444567888999999999
Q ss_pred ecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCcEEE------eecccH
Q 019990 88 VGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC------LTRLDH 161 (332)
Q Consensus 88 ~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~i~~------~t~l~~ 161 (332)
++|.+.+ + ...++.+++++++.+ .. ++++.|... . + .-++..... ...+..
T Consensus 67 ~~~~~~~------~-----~~~~~~~~~a~~~~~-~~-~~v~~s~~~-~--~-------~~~~~~~~~~~~~~~~~~~~~ 123 (183)
T PF13460_consen 67 AAGPPPK------D-----VDAAKNIIEAAKKAG-VK-RVVYLSSAG-V--Y-------RDPPGLFSDEDKPIFPEYARD 123 (183)
T ss_dssp CCHSTTT------H-----HHHHHHHHHHHHHTT-SS-EEEEEEETT-G--T-------TTCTSEEEGGTCGGGHHHHHH
T ss_pred hhhhhcc------c-----ccccccccccccccc-cc-cceeeeccc-c--C-------CCCCcccccccccchhhhHHH
Confidence 9875432 1 677889999999875 32 666666421 1 0 001110000 011112
Q ss_pred HHHHHHHHHHcCCCCCCeeeeEEEecCC
Q 019990 162 NRAMGQISERLKVHVSDVKNVIIWGNHS 189 (332)
Q Consensus 162 ~r~~~~~a~~~~v~~~~v~~~~V~G~hg 189 (332)
.+....+.+.-+++...+|+..++|+..
T Consensus 124 ~~~~e~~~~~~~~~~~ivrp~~~~~~~~ 151 (183)
T PF13460_consen 124 KREAEEALRESGLNWTIVRPGWIYGNPS 151 (183)
T ss_dssp HHHHHHHHHHSTSEEEEEEESEEEBTTS
T ss_pred HHHHHHHHHhcCCCEEEEECcEeEeCCC
Confidence 2222222344588888899888888753
No 176
>PRK12827 short chain dehydrogenase; Provisional
Probab=98.43 E-value=2e-06 Score=76.15 Aligned_cols=153 Identities=19% Similarity=0.185 Sum_probs=84.6
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccc--hhhhhhhHhhhhhh--cc-CCccceEEeCCHHHH
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPA--AEALNGVKMELIDA--AF-PLLKGVVATTDVVEA 78 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~--~~~~~~~~~dl~~~--~~-~~~~~v~~~~~~~~a 78 (332)
++++|+||||+|+||++++..|++.+. ++++++.... .+.......++... .+ ....|+....++.+.
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~-------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 77 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGA-------DVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAA 77 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-------eEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence 357899999999999999999998875 7888775321 11121111122111 00 011233333333333
Q ss_pred h-------CCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHHH-hh--cCCCcEEEEEeCChhhHHHHHH
Q 019990 79 C-------KDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALE-KH--AAPNCKVLVVANPANTNALILK 142 (332)
Q Consensus 79 ~-------~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i~-~~--~~~~~~viv~snp~~~~~~~~~ 142 (332)
+ ...|+|||.+|..... ..+. ...+..|......+++.+. .. .....+++++|+....
T Consensus 78 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~------ 151 (249)
T PRK12827 78 LDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGV------ 151 (249)
T ss_pred HHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhc------
Confidence 2 3589999999874311 1121 2345778888888887776 21 0112356666653221
Q ss_pred HHCCCCCCCcEEEeecccHHHHHHHHHHHc
Q 019990 143 EFAPSIPAKNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 143 ~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
.+.+....|+.++.....+...+++.+
T Consensus 152 ---~~~~~~~~y~~sK~a~~~~~~~l~~~~ 178 (249)
T PRK12827 152 ---RGNRGQVNYAASKAGLIGLTKTLANEL 178 (249)
T ss_pred ---CCCCCCchhHHHHHHHHHHHHHHHHHh
Confidence 122333356777765556666666654
No 177
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=98.43 E-value=1.5e-06 Score=77.85 Aligned_cols=148 Identities=11% Similarity=0.109 Sum_probs=82.0
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh----cc-CCccceEEeCCHHHHh-
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA----AF-PLLKGVVATTDVVEAC- 79 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~----~~-~~~~~v~~~~~~~~a~- 79 (332)
++|+||||+|+||++++..|++.+. +|+++|++.. .+.....++... .. ....|++...++.+++
T Consensus 3 k~ilItG~~~~IG~~la~~l~~~g~-------~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~ 73 (259)
T PRK12384 3 QVAVVIGGGQTLGAFLCHGLAEEGY-------RVAVADINSE--KAANVAQEINAEYGEGMAYGFGADATSEQSVLALSR 73 (259)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEECCHH--HHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHH
Confidence 5699999999999999999998875 8999997532 222222222211 00 1112333322333222
Q ss_pred ------CCCcEEEEecCCCCCC---CCChh---HHHhhhHHHHHHHHHHH----HhhcCCCcEEEEEeCChhhHHHHHHH
Q 019990 80 ------KDVNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKAQASAL----EKHAAPNCKVLVVANPANTNALILKE 143 (332)
Q Consensus 80 ------~~aDiVi~~ag~~~~~---~~~~~---~~~~~N~~~~~~i~~~i----~~~~~~~~~viv~snp~~~~~~~~~~ 143 (332)
...|+|||+||..... ..+.. ..++.|+.....+++.+ .+.. ...+++++|+....
T Consensus 74 ~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~iv~~ss~~~~------- 145 (259)
T PRK12384 74 GVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDG-IQGRIIQINSKSGK------- 145 (259)
T ss_pred HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCC-CCcEEEEecCcccc-------
Confidence 3579999999864321 12222 23466776644444444 3332 23466666653211
Q ss_pred HCCCCCCCcEEEeecccHHHHHHHHHHHc
Q 019990 144 FAPSIPAKNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 144 ~~~~~~~~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
.+.+....|+.+|.....+...+++.+
T Consensus 146 --~~~~~~~~Y~~sKaa~~~l~~~la~e~ 172 (259)
T PRK12384 146 --VGSKHNSGYSAAKFGGVGLTQSLALDL 172 (259)
T ss_pred --cCCCCCchhHHHHHHHHHHHHHHHHHH
Confidence 111222356777777666666666543
No 178
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=98.43 E-value=2e-06 Score=76.28 Aligned_cols=159 Identities=18% Similarity=0.137 Sum_probs=87.8
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHHhC
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEACK 80 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a~~ 80 (332)
+.++++||||+|+||++++..|++.+. ++.+.+.+. .+.......++.+.. . ....|+.....+.++++
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~-------~v~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~ 76 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGA-------KVVINYNSS-KEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVE 76 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCC-------EEEEEcCCc-HHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence 357899999999999999999998775 666554322 122222222332211 1 11224433333333333
Q ss_pred -------CCcEEEEecCCCCCCC---C---ChhHHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHHHC
Q 019990 81 -------DVNIAVMVGGFPRKEG---M---ERKDVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKEFA 145 (332)
Q Consensus 81 -------~aDiVi~~ag~~~~~~---~---~~~~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~~~ 145 (332)
..|+|||+||...... . ...+.++.|+.....+.+.+..+. ....+++++|+....
T Consensus 77 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~--------- 147 (247)
T PRK12935 77 EAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQ--------- 147 (247)
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhc---------
Confidence 4799999998743211 1 122356778777767666665431 123466666652211
Q ss_pred CCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 146 PSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 146 ~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.++...|+.++.....+...++..+. +..++.
T Consensus 148 ~~~~~~~~Y~~sK~a~~~~~~~l~~~~~--~~~i~v 181 (247)
T PRK12935 148 AGGFGQTNYSAAKAGMLGFTKSLALELA--KTNVTV 181 (247)
T ss_pred CCCCCCcchHHHHHHHHHHHHHHHHHHH--HcCcEE
Confidence 1223334677777766666666666652 334554
No 179
>PRK07069 short chain dehydrogenase; Validated
Probab=98.43 E-value=2.7e-06 Score=75.54 Aligned_cols=156 Identities=19% Similarity=0.178 Sum_probs=90.0
Q ss_pred EEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc-----CCccceEEeCCHHHH---
Q 019990 7 RVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF-----PLLKGVVATTDVVEA--- 78 (332)
Q Consensus 7 kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~-----~~~~~v~~~~~~~~a--- 78 (332)
||+||||+|+||.+++..|++.|. +|++.+++.. +.+.....++..... ....|+....++.++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~-------~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 72 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGA-------KVFLTDINDA-AGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQ 72 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCcc-hHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHH
Confidence 489999999999999999998875 8899987521 223322222221100 011233332222222
Q ss_pred ----hCCCcEEEEecCCCCCC---CCCh---hHHHhhhHH----HHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHH
Q 019990 79 ----CKDVNIAVMVGGFPRKE---GMER---KDVMSKNVS----IYKAQASALEKHAAPNCKVLVVANPANTNALILKEF 144 (332)
Q Consensus 79 ----~~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~----~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~ 144 (332)
+...|+|||.||..... ..+. ...+..|+. .++.+++.+++.. ..+++++|+....
T Consensus 73 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~ii~~ss~~~~-------- 142 (251)
T PRK07069 73 AADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ--PASIVNISSVAAF-------- 142 (251)
T ss_pred HHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC--CcEEEEecChhhc--------
Confidence 34679999999864321 1122 224556765 6677777777653 3466666653221
Q ss_pred CCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 145 APSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 145 ~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.++.....+.+.+++.+.-....++.
T Consensus 143 -~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v 178 (251)
T PRK07069 143 -KAEPDYTAYNASKAAVASLTKSIALDCARRGLDVRC 178 (251)
T ss_pred -cCCCCCchhHHHHHHHHHHHHHHHHHhcccCCcEEE
Confidence 112222357778877777777787776544334553
No 180
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=98.42 E-value=1.7e-06 Score=77.25 Aligned_cols=159 Identities=15% Similarity=0.141 Sum_probs=90.0
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc---cCCccceEEeCCHHHHh
Q 019990 3 KNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA---FPLLKGVVATTDVVEAC 79 (332)
Q Consensus 3 ~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~---~~~~~~v~~~~~~~~a~ 79 (332)
...++++||||+|+||.+++..|++.|. ++++.|++. +.+.....++.+.. .....|+....++.+.+
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~G~-------~vvl~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~ 77 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEYGA-------EIIINDITA--ERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAI 77 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCC-------EEEEEcCCH--HHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHH
Confidence 3567899999999999999999998875 889999753 23333333333211 01123443333333222
Q ss_pred -------CCCcEEEEecCCCCC-C--CCChh---HHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHHH
Q 019990 80 -------KDVNIAVMVGGFPRK-E--GMERK---DVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKEF 144 (332)
Q Consensus 80 -------~~aDiVi~~ag~~~~-~--~~~~~---~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~~ 144 (332)
...|+|||.+|.... + ..+.. ..++.|......+.+.+..+. ....+++++|+-.. .
T Consensus 78 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~-------~- 149 (254)
T PRK08085 78 EHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQS-------E- 149 (254)
T ss_pred HHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchh-------c-
Confidence 357999999986321 1 12222 245667666555555554432 12356676665221 1
Q ss_pred CCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 145 APSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 145 ~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.++.....+.+.+++.+. +..|+.
T Consensus 150 -~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v 183 (254)
T PRK08085 150 -LGRDTITPYAASKGAVKMLTRGMCVELA--RHNIQV 183 (254)
T ss_pred -cCCCCCcchHHHHHHHHHHHHHHHHHHH--hhCeEE
Confidence 1223333567777776777777776653 344553
No 181
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.42 E-value=1.7e-06 Score=77.13 Aligned_cols=150 Identities=18% Similarity=0.176 Sum_probs=84.7
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHH----
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEA---- 78 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a---- 78 (332)
++|+||||+|+||++++..|++.|. +++++|+... +.......++.... . ....|++...++.+.
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~-------~vi~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 74 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF-------DLAINDRPDD-EELAATQQELRALGVEVIFFPADVADLSAHEAMLDAA 74 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEecCch-hHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 5699999999999999999998875 7888886532 11111112221110 0 112344333332222
Q ss_pred ---hCCCcEEEEecCCCCC---C--CCCh---hHHHhhhHHHHHHHHHHHHhh----cC-C---CcEEEEEeCChhhHHH
Q 019990 79 ---CKDVNIAVMVGGFPRK---E--GMER---KDVMSKNVSIYKAQASALEKH----AA-P---NCKVLVVANPANTNAL 139 (332)
Q Consensus 79 ---~~~aDiVi~~ag~~~~---~--~~~~---~~~~~~N~~~~~~i~~~i~~~----~~-~---~~~viv~snp~~~~~~ 139 (332)
+...|+|||+||.... + ..+. .+.++.|+.....+.+.+.++ .. . ...++++|+....
T Consensus 75 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~--- 151 (256)
T PRK12745 75 QAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAI--- 151 (256)
T ss_pred HHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhc---
Confidence 2468999999987421 1 1122 234667877776666665433 11 0 1245655542211
Q ss_pred HHHHHCCCCCCCcEEEeecccHHHHHHHHHHHc
Q 019990 140 ILKEFAPSIPAKNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 140 ~~~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
.+.+....|+.++.....+...+++.+
T Consensus 152 ------~~~~~~~~Y~~sK~a~~~~~~~l~~~~ 178 (256)
T PRK12745 152 ------MVSPNRGEYCISKAGLSMAAQLFAARL 178 (256)
T ss_pred ------cCCCCCcccHHHHHHHHHHHHHHHHHH
Confidence 123334467888888888877777764
No 182
>PRK07576 short chain dehydrogenase; Provisional
Probab=98.41 E-value=1.4e-06 Score=78.48 Aligned_cols=153 Identities=13% Similarity=0.112 Sum_probs=89.2
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHHh
Q 019990 3 KNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEAC 79 (332)
Q Consensus 3 ~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a~ 79 (332)
.+.++|+||||+|+||++++..|+..|. +|.++|++.. .+.....++.... . ....|++...++.+++
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~-------~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~ 77 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGA-------NVAVASRSQE--KVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAF 77 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCHH--HHHHHHHHHHHhCCceEEEECCCCCHHHHHHHH
Confidence 3457899999999999999999998875 7999997532 2222222222110 0 0112443333333332
Q ss_pred -------CCCcEEEEecCCCCC---CCCChh---HHHhhhHHHHHHHHHHHHhhc-CCCcEEEEEeCChhhHHHHHHHHC
Q 019990 80 -------KDVNIAVMVGGFPRK---EGMERK---DVMSKNVSIYKAQASALEKHA-APNCKVLVVANPANTNALILKEFA 145 (332)
Q Consensus 80 -------~~aDiVi~~ag~~~~---~~~~~~---~~~~~N~~~~~~i~~~i~~~~-~~~~~viv~snp~~~~~~~~~~~~ 145 (332)
...|+||+.||.... ...+.+ ..+..|......+.+++...- .++.+++++|+....
T Consensus 78 ~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~--------- 148 (264)
T PRK07576 78 AQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAF--------- 148 (264)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhc---------
Confidence 357999999875321 112222 245677777767766655431 123566777764221
Q ss_pred CCCCCCcEEEeecccHHHHHHHHHHHcC
Q 019990 146 PSIPAKNITCLTRLDHNRAMGQISERLK 173 (332)
Q Consensus 146 ~~~~~~~i~~~t~l~~~r~~~~~a~~~~ 173 (332)
.+.+....|+.++.....+...++..+.
T Consensus 149 ~~~~~~~~Y~asK~a~~~l~~~la~e~~ 176 (264)
T PRK07576 149 VPMPMQAHVCAAKAGVDMLTRTLALEWG 176 (264)
T ss_pred cCCCCccHHHHHHHHHHHHHHHHHHHhh
Confidence 1223333567778777788777777654
No 183
>PRK08219 short chain dehydrogenase; Provisional
Probab=98.41 E-value=3.8e-06 Score=73.40 Aligned_cols=146 Identities=17% Similarity=0.180 Sum_probs=81.1
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhC---C
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACK---D 81 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~---~ 81 (332)
+++|+||||+|++|++++..|++. . +|++++++.. .......++... .....|+....++.++++ +
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~-------~V~~~~r~~~--~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~ 71 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-H-------TLLLGGRPAE--RLDELAAELPGA-TPFPVDLTDPEAIAAAVEQLGR 71 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-C-------CEEEEeCCHH--HHHHHHHHhccc-eEEecCCCCHHHHHHHHHhcCC
Confidence 568999999999999999999876 4 7889987532 121111111111 112245554445555554 5
Q ss_pred CcEEEEecCCCCCC---CCCh---hHHHhhhHHH----HHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCC
Q 019990 82 VNIAVMVGGFPRKE---GMER---KDVMSKNVSI----YKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAK 151 (332)
Q Consensus 82 aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~----~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~ 151 (332)
.|+|||++|..... ..+. ...+..|... .+.+++.+++. ..+++++|+.... .+.++.
T Consensus 72 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~v~~ss~~~~---------~~~~~~ 139 (227)
T PRK08219 72 LDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA---HGHVVFINSGAGL---------RANPGW 139 (227)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC---CCeEEEEcchHhc---------CcCCCC
Confidence 89999999874321 1111 1235556655 44444444443 2356666643211 112233
Q ss_pred cEEEeecccHHHHHHHHHHHcC
Q 019990 152 NITCLTRLDHNRAMGQISERLK 173 (332)
Q Consensus 152 ~i~~~t~l~~~r~~~~~a~~~~ 173 (332)
..|+.++.....+...+++.+.
T Consensus 140 ~~y~~~K~a~~~~~~~~~~~~~ 161 (227)
T PRK08219 140 GSYAASKFALRALADALREEEP 161 (227)
T ss_pred chHHHHHHHHHHHHHHHHHHhc
Confidence 3566667655666666665544
No 184
>PRK08226 short chain dehydrogenase; Provisional
Probab=98.39 E-value=1.8e-06 Score=77.47 Aligned_cols=158 Identities=18% Similarity=0.203 Sum_probs=89.0
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHHh-
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEAC- 79 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a~- 79 (332)
..++++||||+|+||++++..|++.|. +|++++++.. .......+.... . ....|+....++.+.+
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-------~Vv~~~r~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~ 74 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-------NLILLDISPE---IEKLADELCGRGHRCTAVVADVRDPASVAAAIK 74 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEecCCHH---HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHH
Confidence 457899999999999999999999886 7999987531 111111221110 0 1123443333333332
Q ss_pred ------CCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHHHC
Q 019990 80 ------KDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKEFA 145 (332)
Q Consensus 80 ------~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~~~ 145 (332)
...|+|||.||..... ..+. ...+..|+.....+.+.+..+. ....+++++|+.... .
T Consensus 75 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-------~- 146 (263)
T PRK08226 75 RAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGD-------M- 146 (263)
T ss_pred HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhc-------c-
Confidence 3579999999863211 1122 2246677776666666654431 123466666652110 0
Q ss_pred CCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 146 PSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 146 ~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
...+....|+.++.....+...+++.+. +..++.
T Consensus 147 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~--~~~i~v 180 (263)
T PRK08226 147 VADPGETAYALTKAAIVGLTKSLAVEYA--QSGIRV 180 (263)
T ss_pred cCCCCcchHHHHHHHHHHHHHHHHHHhc--ccCcEE
Confidence 1122233577777777777777877764 334553
No 185
>PRK06182 short chain dehydrogenase; Validated
Probab=98.38 E-value=1.8e-06 Score=78.01 Aligned_cols=151 Identities=13% Similarity=0.120 Sum_probs=85.2
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc-CCccceEEeCCHHHHhC--
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF-PLLKGVVATTDVVEACK-- 80 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~a~~-- 80 (332)
++++|+||||+|+||++++..|++.|. +|++.+++. +.+.. +..... ....|+....++.+.++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-------~V~~~~r~~--~~l~~----~~~~~~~~~~~Dv~~~~~~~~~~~~~ 68 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-------TVYGAARRV--DKMED----LASLGVHPLSLDVTDEASIKAAVDTI 68 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHH----HHhCCCeEEEeeCCCHHHHHHHHHHH
Confidence 356899999999999999999998875 788888753 22221 111111 11234444434434333
Q ss_pred -----CCcEEEEecCCCCCC---CCC---hhHHHhhhHHH----HHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHC
Q 019990 81 -----DVNIAVMVGGFPRKE---GME---RKDVMSKNVSI----YKAQASALEKHAAPNCKVLVVANPANTNALILKEFA 145 (332)
Q Consensus 81 -----~aDiVi~~ag~~~~~---~~~---~~~~~~~N~~~----~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~ 145 (332)
+.|++|+.||..... ..+ ....++.|... ++.+++.+++.+ ..+++++|+....
T Consensus 69 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~--~g~iv~isS~~~~--------- 137 (273)
T PRK06182 69 IAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR--SGRIINISSMGGK--------- 137 (273)
T ss_pred HHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC--CCEEEEEcchhhc---------
Confidence 689999999874211 112 12345667655 455566666553 3466766652210
Q ss_pred CCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCee
Q 019990 146 PSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVK 180 (332)
Q Consensus 146 ~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~ 180 (332)
...+....|+.++.....+...++..+. +..++
T Consensus 138 ~~~~~~~~Y~~sKaa~~~~~~~l~~e~~--~~gi~ 170 (273)
T PRK06182 138 IYTPLGAWYHATKFALEGFSDALRLEVA--PFGID 170 (273)
T ss_pred CCCCCccHhHHHHHHHHHHHHHHHHHhc--ccCCE
Confidence 0112222466677666666666665432 33454
No 186
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=98.38 E-value=3.1e-06 Score=76.03 Aligned_cols=158 Identities=16% Similarity=0.116 Sum_probs=89.4
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHH----
Q 019990 3 KNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEA---- 78 (332)
Q Consensus 3 ~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a---- 78 (332)
.+.++++||||+|+||++++..|++.|. +|.+++++. +.+.....++.........|+....+..++
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 74 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGA-------RVAVLERSA--EKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQT 74 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHH
Confidence 3567899999999999999999998885 789998753 223222222211000112233332233222
Q ss_pred ---hCCCcEEEEecCCCCC--C--CCChh-------HHHhhhHHHHHHHHHHHHhhc-CCCcEEEEEeCChhhHHHHHHH
Q 019990 79 ---CKDVNIAVMVGGFPRK--E--GMERK-------DVMSKNVSIYKAQASALEKHA-APNCKVLVVANPANTNALILKE 143 (332)
Q Consensus 79 ---~~~aDiVi~~ag~~~~--~--~~~~~-------~~~~~N~~~~~~i~~~i~~~~-~~~~~viv~snp~~~~~~~~~~ 143 (332)
+...|++|+.||.... + ..+.+ ..+..|+.....+.+.+...- ...+.+|++++-...
T Consensus 75 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~------- 147 (263)
T PRK06200 75 VDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSF------- 147 (263)
T ss_pred HHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhc-------
Confidence 2357999999996421 1 12221 234567665555555444321 123456665542110
Q ss_pred HCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 144 FAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 144 ~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.+|.....+...+++.++ +. ||.
T Consensus 148 --~~~~~~~~Y~~sK~a~~~~~~~la~el~--~~-Irv 180 (263)
T PRK06200 148 --YPGGGGPLYTASKHAVVGLVRQLAYELA--PK-IRV 180 (263)
T ss_pred --CCCCCCchhHHHHHHHHHHHHHHHHHHh--cC-cEE
Confidence 1122233678888888888888888875 32 664
No 187
>PRK06701 short chain dehydrogenase; Provisional
Probab=98.36 E-value=3.5e-06 Score=77.05 Aligned_cols=158 Identities=13% Similarity=0.099 Sum_probs=89.7
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHHh--
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEAC-- 79 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a~-- 79 (332)
.++|+||||+|+||++++..|++.|. ++++++++... .+......+.... . ....|+....++.+.+
T Consensus 46 ~k~iLItGasggIG~~la~~l~~~G~-------~V~l~~r~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 117 (290)
T PRK06701 46 GKVALITGGDSGIGRAVAVLFAKEGA-------DIAIVYLDEHE-DANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEE 117 (290)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCcch-HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence 46899999999999999999998875 78888875321 1222222222110 0 1123343333333322
Q ss_pred -----CCCcEEEEecCCCCC--C--CCCh---hHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCC
Q 019990 80 -----KDVNIAVMVGGFPRK--E--GMER---KDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPS 147 (332)
Q Consensus 80 -----~~aDiVi~~ag~~~~--~--~~~~---~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~ 147 (332)
...|+|||.||.... + ..+. ...+..|+.....+++++.++-.+...+|++|+-... .+
T Consensus 118 i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~---------~~ 188 (290)
T PRK06701 118 TVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGY---------EG 188 (290)
T ss_pred HHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEeccccc---------CC
Confidence 357999999986321 1 1222 2356788888888888877642233466666653211 11
Q ss_pred CCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 148 IPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 148 ~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+....|+.++.....+...+++.+. +..|+.
T Consensus 189 ~~~~~~Y~~sK~a~~~l~~~la~~~~--~~gIrv 220 (290)
T PRK06701 189 NETLIDYSATKGAIHAFTRSLAQSLV--QKGIRV 220 (290)
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHhh--hcCeEE
Confidence 12222456666665666667777654 345654
No 188
>PRK06914 short chain dehydrogenase; Provisional
Probab=98.36 E-value=1.8e-06 Score=78.26 Aligned_cols=147 Identities=11% Similarity=0.106 Sum_probs=81.6
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc----c-CCccceEEeCCHHH--
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA----F-PLLKGVVATTDVVE-- 77 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~----~-~~~~~v~~~~~~~~-- 77 (332)
+++++||||+|++|++++..|++.|. +|++++++.. .......++.+.. . ....|+....++.+
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~-------~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~ 73 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY-------LVIATMRNPE--KQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQ 73 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-------EEEEEeCCHH--HHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHH
Confidence 35799999999999999999998875 7888887532 2222211121110 0 11224433332221
Q ss_pred ----HhCCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHH----HhhcCCCcEEEEEeCChhhHHHHHHH
Q 019990 78 ----ACKDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASAL----EKHAAPNCKVLVVANPANTNALILKE 143 (332)
Q Consensus 78 ----a~~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i----~~~~~~~~~viv~snp~~~~~~~~~~ 143 (332)
.+...|+|||+||..... +.+. .+.+..|......+++.+ ++.. ..+++++|+....
T Consensus 74 ~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~iv~vsS~~~~------- 144 (280)
T PRK06914 74 LVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK--SGKIINISSISGR------- 144 (280)
T ss_pred HHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CCEEEEECccccc-------
Confidence 123579999999864321 1121 234567777766665554 4432 2456666542211
Q ss_pred HCCCCCCCcEEEeecccHHHHHHHHHHH
Q 019990 144 FAPSIPAKNITCLTRLDHNRAMGQISER 171 (332)
Q Consensus 144 ~~~~~~~~~i~~~t~l~~~r~~~~~a~~ 171 (332)
.+.++...|+.++.....+...++..
T Consensus 145 --~~~~~~~~Y~~sK~~~~~~~~~l~~~ 170 (280)
T PRK06914 145 --VGFPGLSPYVSSKYALEGFSESLRLE 170 (280)
T ss_pred --CCCCCCchhHHhHHHHHHHHHHHHHH
Confidence 12333445677776666666666543
No 189
>PRK09134 short chain dehydrogenase; Provisional
Probab=98.36 E-value=2.2e-06 Score=76.75 Aligned_cols=164 Identities=16% Similarity=0.126 Sum_probs=90.6
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHHh
Q 019990 3 KNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEAC 79 (332)
Q Consensus 3 ~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a~ 79 (332)
.++++++||||+|+||++++..|.+.+. ++++.+.... +.+......+.... . ....|+....++.+++
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~g~-------~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 78 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAHGF-------DVAVHYNRSR-DEAEALAAEIRALGRRAVALQADLADEAEVRALV 78 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCCH-HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence 4567899999999999999999998775 6777665321 12222222221110 0 1123444333333333
Q ss_pred -------CCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHHHhhcC--CCcEEEEEeCChhhHHHHHHHH
Q 019990 80 -------KDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEKHAA--PNCKVLVVANPANTNALILKEF 144 (332)
Q Consensus 80 -------~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i~~~~~--~~~~viv~snp~~~~~~~~~~~ 144 (332)
...|+|||+||..... ..+. ...++.|+.....+.+++..+.. ....+++++.. .. +
T Consensus 79 ~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~-~~--~----- 150 (258)
T PRK09134 79 ARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQ-RV--W----- 150 (258)
T ss_pred HHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECch-hh--c-----
Confidence 2479999999864221 1121 33567788777777776665431 12344444321 10 0
Q ss_pred CCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEec
Q 019990 145 APSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGN 187 (332)
Q Consensus 145 ~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~ 187 (332)
...|....|+.+|...+.+.+.+++.++- . ++. +++.+
T Consensus 151 -~~~p~~~~Y~~sK~a~~~~~~~la~~~~~--~-i~v-~~i~P 188 (258)
T PRK09134 151 -NLNPDFLSYTLSKAALWTATRTLAQALAP--R-IRV-NAIGP 188 (258)
T ss_pred -CCCCCchHHHHHHHHHHHHHHHHHHHhcC--C-cEE-EEeec
Confidence 11122235677887777777778877652 2 653 34454
No 190
>PRK09072 short chain dehydrogenase; Provisional
Probab=98.35 E-value=2.4e-06 Score=76.69 Aligned_cols=161 Identities=18% Similarity=0.214 Sum_probs=88.9
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh-cc-CCccceEEeCCHHHH
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA-AF-PLLKGVVATTDVVEA 78 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~-~~-~~~~~v~~~~~~~~a 78 (332)
|+.+.++|+||||+|+||.+++..|++.|. +|.+++++. +.+.....++... .. ....|+....++.+.
T Consensus 1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~ 71 (263)
T PRK09072 1 MDLKDKRVLLTGASGGIGQALAEALAAAGA-------RLLLVGRNA--EKLEALAARLPYPGRHRWVVADLTSEAGREAV 71 (263)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence 777778999999999999999999998885 899999753 2232222222110 00 011233322222221
Q ss_pred ------hCCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHHH
Q 019990 79 ------CKDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKEF 144 (332)
Q Consensus 79 ------~~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~~ 144 (332)
+...|+|||+||..... ..+. ...++.|+.....+.+.+..+- .+...++++++....
T Consensus 72 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~-------- 143 (263)
T PRK09072 72 LARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGS-------- 143 (263)
T ss_pred HHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhC--------
Confidence 24679999999874321 1121 2345678777766666665431 122455666653211
Q ss_pred CCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 145 APSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 145 ~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.++.....+...++..+. +..++.
T Consensus 144 -~~~~~~~~Y~~sK~a~~~~~~~l~~~~~--~~~i~v 177 (263)
T PRK09072 144 -IGYPGYASYCASKFALRGFSEALRRELA--DTGVRV 177 (263)
T ss_pred -cCCCCccHHHHHHHHHHHHHHHHHHHhc--ccCcEE
Confidence 1222222456666655555666665543 334543
No 191
>PRK07775 short chain dehydrogenase; Provisional
Probab=98.35 E-value=3.6e-06 Score=76.21 Aligned_cols=150 Identities=13% Similarity=0.062 Sum_probs=85.1
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh--cc-CCccceEEeCCHHHHh--
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA--AF-PLLKGVVATTDVVEAC-- 79 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~--~~-~~~~~v~~~~~~~~a~-- 79 (332)
++.++||||+|+||++++..|++.|. +|.+.+++. +.+.....++... .. ....|++...++.+++
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 80 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAGF-------PVALGARRV--EKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQ 80 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence 45799999999999999999998885 788887643 2222221122111 00 0112444333333333
Q ss_pred -----CCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHHHCC
Q 019990 80 -----KDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKEFAP 146 (332)
Q Consensus 80 -----~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~~~~ 146 (332)
...|+|||.||..... ..+. ...+..|......+.+.+.... ....+++++|+... + .
T Consensus 81 ~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~---~------~ 151 (274)
T PRK07775 81 AEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVA---L------R 151 (274)
T ss_pred HHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHh---c------C
Confidence 3679999999864311 1122 2335677776666666653221 11245666665211 0 1
Q ss_pred CCCCCcEEEeecccHHHHHHHHHHHc
Q 019990 147 SIPAKNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 147 ~~~~~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
+.+....|+.++.....+...+++.+
T Consensus 152 ~~~~~~~Y~~sK~a~~~l~~~~~~~~ 177 (274)
T PRK07775 152 QRPHMGAYGAAKAGLEAMVTNLQMEL 177 (274)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHh
Confidence 22333357778888888887777765
No 192
>PRK07454 short chain dehydrogenase; Provisional
Probab=98.35 E-value=2.3e-06 Score=75.74 Aligned_cols=152 Identities=17% Similarity=0.162 Sum_probs=83.2
Q ss_pred CCC-CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh--cc-CCccceEEeCCHH
Q 019990 1 MAK-NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA--AF-PLLKGVVATTDVV 76 (332)
Q Consensus 1 m~~-~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~--~~-~~~~~v~~~~~~~ 76 (332)
|+. .+++++||||+|++|+.++..|++.|. +|++++++.. .......++... .. ....|++...++.
T Consensus 1 ~~~~~~k~vlItG~sg~iG~~la~~l~~~G~-------~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 71 (241)
T PRK07454 1 MSLNSMPRALITGASSGIGKATALAFAKAGW-------DLALVARSQD--ALEALAAELRSTGVKAAAYSIDLSNPEAIA 71 (241)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCHH--HHHHHHHHHHhCCCcEEEEEccCCCHHHHH
Confidence 664 456799999999999999999999885 7999997542 222222222211 00 1123443333333
Q ss_pred HHh-------CCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHH----HhhcCCCcEEEEEeCChhhHHH
Q 019990 77 EAC-------KDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASAL----EKHAAPNCKVLVVANPANTNAL 139 (332)
Q Consensus 77 ~a~-------~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i----~~~~~~~~~viv~snp~~~~~~ 139 (332)
.++ ...|+||+.+|..... ..+. ...+..|+.....+.+.+ .+.. ..+++++|+....
T Consensus 72 ~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~isS~~~~--- 146 (241)
T PRK07454 72 PGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG--GGLIINVSSIAAR--- 146 (241)
T ss_pred HHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC--CcEEEEEccHHhC---
Confidence 333 3589999999864321 1121 234566776555544444 3332 3466666653211
Q ss_pred HHHHHCCCCCCCcEEEeecccHHHHHHHHHHHc
Q 019990 140 ILKEFAPSIPAKNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 140 ~~~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
.+.+....|+.++.....+...+++.+
T Consensus 147 ------~~~~~~~~Y~~sK~~~~~~~~~~a~e~ 173 (241)
T PRK07454 147 ------NAFPQWGAYCVSKAALAAFTKCLAEEE 173 (241)
T ss_pred ------cCCCCccHHHHHHHHHHHHHHHHHHHh
Confidence 112222345666665555555555544
No 193
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=98.35 E-value=8.1e-06 Score=72.93 Aligned_cols=163 Identities=14% Similarity=0.072 Sum_probs=94.1
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc---CCccceEEeCCHHHH--
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF---PLLKGVVATTDVVEA-- 78 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~---~~~~~v~~~~~~~~a-- 78 (332)
+.++|+||||+|+||++++..|.+.|. ++++++++. +.+.....++.+... ....|++...++.++
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-------~vv~~~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~ 80 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-------SVVVSDINA--DAANHVVDEIQQLGGQAFACRCDITSEQELSALAD 80 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence 467999999999999999999998875 788888753 223222223322110 011344333333332
Q ss_pred -----hCCCcEEEEecCCCCC--CCCChhH---HHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHHHCC
Q 019990 79 -----CKDVNIAVMVGGFPRK--EGMERKD---VMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKEFAP 146 (332)
Q Consensus 79 -----~~~aDiVi~~ag~~~~--~~~~~~~---~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~~~~ 146 (332)
+...|++||+||.... ...+..+ .+..|+.....+++.+..+- .....++++|+.... .
T Consensus 81 ~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~---------~ 151 (255)
T PRK06113 81 FALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAE---------N 151 (255)
T ss_pred HHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEeccccc---------C
Confidence 2357999999986321 1222222 35678777766666665321 122466666653211 1
Q ss_pred CCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEec
Q 019990 147 SIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGN 187 (332)
Q Consensus 147 ~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~ 187 (332)
+.+....|+.++.....+.+.+++.+. +..|+. +++.+
T Consensus 152 ~~~~~~~Y~~sK~a~~~~~~~la~~~~--~~~i~v-~~v~p 189 (255)
T PRK06113 152 KNINMTSYASSKAAASHLVRNMAFDLG--EKNIRV-NGIAP 189 (255)
T ss_pred CCCCcchhHHHHHHHHHHHHHHHHHhh--hhCeEE-EEEec
Confidence 223333577778777777777776653 556774 44554
No 194
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=98.35 E-value=2e-06 Score=76.51 Aligned_cols=152 Identities=16% Similarity=0.103 Sum_probs=85.7
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHh----
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEAC---- 79 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~---- 79 (332)
+.++++||||+|+||++++..|++.|. ++++++++. .... ......+..|+....++.+.+
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-------~v~~~~~~~----~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 71 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-------KVIGFDQAF----LTQE----DYPFATFVLDVSDAAAVAQVCQRLL 71 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEecch----hhhc----CCceEEEEecCCCHHHHHHHHHHHH
Confidence 457899999999999999999998875 788888742 1000 000000112333222333322
Q ss_pred ---CCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHHHCCCC
Q 019990 80 ---KDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKEFAPSI 148 (332)
Q Consensus 80 ---~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~~~~~~ 148 (332)
...|+||+.+|..... ..+. ...+..|......+++++..+- ....+++++|+... . .+.
T Consensus 72 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~-------~--~~~ 142 (252)
T PRK08220 72 AETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAA-------H--VPR 142 (252)
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchh-------c--cCC
Confidence 3479999999874321 1122 2345677776666666654321 12346666665221 0 112
Q ss_pred CCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 149 PAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 149 ~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
+....|+.++.....+...+++.+. +..++.
T Consensus 143 ~~~~~Y~~sK~a~~~~~~~la~e~~--~~~i~v 173 (252)
T PRK08220 143 IGMAAYGASKAALTSLAKCVGLELA--PYGVRC 173 (252)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhh--HhCeEE
Confidence 2223567777777777777777743 334553
No 195
>PRK06123 short chain dehydrogenase; Provisional
Probab=98.35 E-value=3.6e-06 Score=74.71 Aligned_cols=150 Identities=15% Similarity=0.118 Sum_probs=84.3
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHHhC--
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEACK-- 80 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a~~-- 80 (332)
+.++||||+|+||++++..|++.|. .+++.+.+. .+.......++.... . ....|++...++.++++
T Consensus 3 ~~~lVtG~~~~iG~~~a~~l~~~G~-------~vv~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 74 (248)
T PRK06123 3 KVMIITGASRGIGAATALLAAERGY-------AVCLNYLRN-RDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAV 74 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC-------eEEEecCCC-HHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHH
Confidence 4699999999999999999998775 666766432 122222222222110 0 11234443333333333
Q ss_pred -----CCcEEEEecCCCCCC----CCChh---HHHhhhHHHHHHHHHHHHhhc-----CCCcEEEEEeCChhhHHHHHHH
Q 019990 81 -----DVNIAVMVGGFPRKE----GMERK---DVMSKNVSIYKAQASALEKHA-----APNCKVLVVANPANTNALILKE 143 (332)
Q Consensus 81 -----~aDiVi~~ag~~~~~----~~~~~---~~~~~N~~~~~~i~~~i~~~~-----~~~~~viv~snp~~~~~~~~~~ 143 (332)
..|+|||+||..... ..+.+ ..+..|+.....+.+.+.++- ...+.++++|+....
T Consensus 75 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~------- 147 (248)
T PRK06123 75 DRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAAR------- 147 (248)
T ss_pred HHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhc-------
Confidence 579999999874321 11211 346777777666555554431 012456766753221
Q ss_pred HCCCCCCC-cEEEeecccHHHHHHHHHHHc
Q 019990 144 FAPSIPAK-NITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 144 ~~~~~~~~-~i~~~t~l~~~r~~~~~a~~~ 172 (332)
.+.+.. ..|+.++.....+...+++.+
T Consensus 148 --~~~~~~~~~Y~~sKaa~~~~~~~la~~~ 175 (248)
T PRK06123 148 --LGSPGEYIDYAASKGAIDTMTIGLAKEV 175 (248)
T ss_pred --CCCCCCccchHHHHHHHHHHHHHHHHHh
Confidence 112221 247888888888888888876
No 196
>PRK06924 short chain dehydrogenase; Provisional
Probab=98.35 E-value=1.7e-06 Score=77.07 Aligned_cols=160 Identities=9% Similarity=0.047 Sum_probs=87.6
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc-CCccceEEeCCHHHHhCC--
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF-PLLKGVVATTDVVEACKD-- 81 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~a~~~-- 81 (332)
|++|+||||+|+||++++..|++.+. +|.++++... +.+....... .... ....|+....++.+.++.
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~g~-------~V~~~~r~~~-~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~ 71 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEKGT-------HVISISRTEN-KELTKLAEQY-NSNLTFHSLDLQDVHELETNFNEIL 71 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhcCC-------EEEEEeCCch-HHHHHHHhcc-CCceEEEEecCCCHHHHHHHHHHHH
Confidence 35799999999999999999998875 7888887542 1221111100 0011 112344433333333321
Q ss_pred ---------CcEEEEecCCCCC---C-CCChhH---HHhhhHHH----HHHHHHHHHhhcCCCcEEEEEeCChhhHHHHH
Q 019990 82 ---------VNIAVMVGGFPRK---E-GMERKD---VMSKNVSI----YKAQASALEKHAAPNCKVLVVANPANTNALIL 141 (332)
Q Consensus 82 ---------aDiVi~~ag~~~~---~-~~~~~~---~~~~N~~~----~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~ 141 (332)
.+++|+.+|.... . ..+..+ .++.|... .+.+++.+++.. ...+++++|+...
T Consensus 72 ~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~~~------ 144 (251)
T PRK06924 72 SSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWK-VDKRVINISSGAA------ 144 (251)
T ss_pred HhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccC-CCceEEEecchhh------
Confidence 1267888876321 1 122222 23445543 344445444432 2346666665211
Q ss_pred HHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeE
Q 019990 142 KEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVI 183 (332)
Q Consensus 142 ~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~ 183 (332)
. ..+++...|+.++.....+.+.++..++..+..++...
T Consensus 145 --~-~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~ 183 (251)
T PRK06924 145 --K-NPYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVA 183 (251)
T ss_pred --c-CCCCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEE
Confidence 0 23444446788888888888888887765556676543
No 197
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=98.34 E-value=2.5e-06 Score=76.15 Aligned_cols=152 Identities=12% Similarity=0.124 Sum_probs=84.9
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHHh-
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEAC- 79 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a~- 79 (332)
++++|+||||+|+||++++..|++.|. +|.+++++. +.+.....++.... . ....|+....++.+++
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 80 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-------HVLVNGRNA--ATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFA 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-------eEEEEeCCH--HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence 468899999999999999999998875 899999864 23333233332111 1 1123444333333333
Q ss_pred ------CCCcEEEEecCCCCCC---CCChh---HHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHHHC
Q 019990 80 ------KDVNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKEFA 145 (332)
Q Consensus 80 ------~~aDiVi~~ag~~~~~---~~~~~---~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~~~ 145 (332)
...|+||+.+|..... ..+.. ..+..|......+.+.+.+.- .....++++|+....
T Consensus 81 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~--------- 151 (256)
T PRK06124 81 RIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQ--------- 151 (256)
T ss_pred HHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhc---------
Confidence 2469999999864211 11222 245667766656654443321 123466776754221
Q ss_pred CCCCCCcEEEeecccHHHHHHHHHHHcC
Q 019990 146 PSIPAKNITCLTRLDHNRAMGQISERLK 173 (332)
Q Consensus 146 ~~~~~~~i~~~t~l~~~r~~~~~a~~~~ 173 (332)
.+.+....|+.++.....+...+++.++
T Consensus 152 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~ 179 (256)
T PRK06124 152 VARAGDAVYPAAKQGLTGLMRALAAEFG 179 (256)
T ss_pred cCCCCccHhHHHHHHHHHHHHHHHHHHH
Confidence 1122223456666666666666666654
No 198
>PRK12742 oxidoreductase; Provisional
Probab=98.34 E-value=7.5e-06 Score=72.11 Aligned_cols=161 Identities=11% Similarity=0.133 Sum_probs=90.0
Q ss_pred CC-CCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHh
Q 019990 1 MA-KNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEAC 79 (332)
Q Consensus 1 m~-~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~ 79 (332)
|+ .+.++|+||||+|.||++++..|++.|. ++++.+.+.. +..+....++. .. ....|+.....+.+.+
T Consensus 1 m~~~~~k~vlItGasggIG~~~a~~l~~~G~-------~v~~~~~~~~-~~~~~l~~~~~-~~-~~~~D~~~~~~~~~~~ 70 (237)
T PRK12742 1 MGAFTGKKVLVLGGSRGIGAAIVRRFVTDGA-------NVRFTYAGSK-DAAERLAQETG-AT-AVQTDSADRDAVIDVV 70 (237)
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEecCCCH-HHHHHHHHHhC-Ce-EEecCCCCHHHHHHHH
Confidence 54 2457899999999999999999998875 6777654321 12221111111 00 0112332222233333
Q ss_pred ---CCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCC
Q 019990 80 ---KDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPA 150 (332)
Q Consensus 80 ---~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~ 150 (332)
...|++||.||..... ..+. ...+..|+.....+...+.+...+..+++++++.... . ...+.
T Consensus 71 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~------~--~~~~~ 142 (237)
T PRK12742 71 RKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGD------R--MPVAG 142 (237)
T ss_pred HHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccc------c--CCCCC
Confidence 3479999999874211 1121 2345667766655555444432234566666653210 0 12334
Q ss_pred CcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 151 KNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 151 ~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
...|+.++.....+...+++.++ +..++.
T Consensus 143 ~~~Y~~sKaa~~~~~~~la~~~~--~~gi~v 171 (237)
T PRK12742 143 MAAYAASKSALQGMARGLARDFG--PRGITI 171 (237)
T ss_pred CcchHHhHHHHHHHHHHHHHHHh--hhCeEE
Confidence 44678888888888888888765 344654
No 199
>PRK12939 short chain dehydrogenase; Provisional
Probab=98.34 E-value=3.3e-06 Score=74.90 Aligned_cols=157 Identities=16% Similarity=0.096 Sum_probs=89.2
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHHh--
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEAC-- 79 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a~-- 79 (332)
.++|+||||+|.||++++..|++.|. ++++++++. +.+.....++.... . .+..|+....++.+.+
T Consensus 7 ~~~vlItGa~g~iG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 77 (250)
T PRK12939 7 GKRALVTGAARGLGAAFAEALAEAGA-------TVAFNDGLA--AEARELAAALEAAGGRAHAIAADLADPASVQRFFDA 77 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence 57899999999999999999998875 788888753 23332323332211 0 1122443333332222
Q ss_pred -----CCCcEEEEecCCCCCC---CCChh---HHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHHHCC
Q 019990 80 -----KDVNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKEFAP 146 (332)
Q Consensus 80 -----~~aDiVi~~ag~~~~~---~~~~~---~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~~~~ 146 (332)
.+.|+|||++|..... ..+.. ..+..|......+.+.+..+. .+..+++++|+.... .
T Consensus 78 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~---------~ 148 (250)
T PRK12939 78 AAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTAL---------W 148 (250)
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhc---------c
Confidence 4689999999874321 11222 234567776666666654432 123466766652211 1
Q ss_pred CCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 147 SIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 147 ~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
+.+....|+.++....++.+.+++.+. ...++.
T Consensus 149 ~~~~~~~y~~sK~~~~~~~~~l~~~~~--~~~i~v 181 (250)
T PRK12939 149 GAPKLGAYVASKGAVIGMTRSLARELG--GRGITV 181 (250)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHh--hhCEEE
Confidence 122222456677777777777777654 234553
No 200
>PRK07063 short chain dehydrogenase; Provisional
Probab=98.34 E-value=6e-06 Score=73.94 Aligned_cols=158 Identities=15% Similarity=0.104 Sum_probs=90.8
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh----cc-CCccceEEeCCHHHHh
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA----AF-PLLKGVVATTDVVEAC 79 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~----~~-~~~~~v~~~~~~~~a~ 79 (332)
.++++||||+|+||.+++..|++.|. +|+++|++. +.+.....++... .. ....|+....++.+++
T Consensus 7 ~k~vlVtGas~gIG~~~a~~l~~~G~-------~vv~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 77 (260)
T PRK07063 7 GKVALVTGAAQGIGAAIARAFAREGA-------AVALADLDA--ALAERAAAAIARDVAGARVLAVPADVTDAASVAAAV 77 (260)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHH
Confidence 57899999999999999999999885 889998853 2333333333220 00 1123443333333333
Q ss_pred -------CCCcEEEEecCCCCCC---CCChh---HHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHHH
Q 019990 80 -------KDVNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKEF 144 (332)
Q Consensus 80 -------~~aDiVi~~ag~~~~~---~~~~~---~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~~ 144 (332)
...|++||.||..... ..+.. ..+..|......+.+++..+- ...+.+|++|+....
T Consensus 78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-------- 149 (260)
T PRK07063 78 AAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAF-------- 149 (260)
T ss_pred HHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhc--------
Confidence 3689999999864211 12222 235567665544444433211 123566776653211
Q ss_pred CCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeee
Q 019990 145 APSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNV 182 (332)
Q Consensus 145 ~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~ 182 (332)
.+.+....|+.++.....+.+.+++.+. +..||..
T Consensus 150 -~~~~~~~~Y~~sKaa~~~~~~~la~el~--~~gIrvn 184 (260)
T PRK07063 150 -KIIPGCFPYPVAKHGLLGLTRALGIEYA--ARNVRVN 184 (260)
T ss_pred -cCCCCchHHHHHHHHHHHHHHHHHHHhC--ccCeEEE
Confidence 1223233567778777788888887764 4567643
No 201
>PRK06841 short chain dehydrogenase; Provisional
Probab=98.33 E-value=4e-06 Score=74.79 Aligned_cols=151 Identities=19% Similarity=0.190 Sum_probs=86.2
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc-CCccceEEeCCHHHH----
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF-PLLKGVVATTDVVEA---- 78 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~a---- 78 (332)
..++|+||||+|+||++++..|++.|. +|++++++.. ......++..... ....|+....++.+.
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-------~Vi~~~r~~~---~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-------RVALLDRSED---VAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAV 83 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCHH---HHHHHHHhhCCceEEEEecCCCHHHHHHHHHHH
Confidence 457899999999999999999998875 7888887532 1111112211100 111233333233222
Q ss_pred ---hCCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHHHCCC
Q 019990 79 ---CKDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKEFAPS 147 (332)
Q Consensus 79 ---~~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~~~~~ 147 (332)
+...|+|||.+|..... ..+. ...+..|......+.+.+..+. ....+++++|+-... .+
T Consensus 84 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~---------~~ 154 (255)
T PRK06841 84 ISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGV---------VA 154 (255)
T ss_pred HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhc---------cC
Confidence 23679999999864311 1121 2245677777767776665431 123466766652211 12
Q ss_pred CCCCcEEEeecccHHHHHHHHHHHcC
Q 019990 148 IPAKNITCLTRLDHNRAMGQISERLK 173 (332)
Q Consensus 148 ~~~~~i~~~t~l~~~r~~~~~a~~~~ 173 (332)
.+....|+.++.....+...+++.++
T Consensus 155 ~~~~~~Y~~sK~a~~~~~~~la~e~~ 180 (255)
T PRK06841 155 LERHVAYCASKAGVVGMTKVLALEWG 180 (255)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 33333567777766777777777754
No 202
>PRK06398 aldose dehydrogenase; Validated
Probab=98.33 E-value=9.4e-06 Score=72.81 Aligned_cols=154 Identities=13% Similarity=0.093 Sum_probs=90.7
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHH-----
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEA----- 78 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a----- 78 (332)
+.++++||||+|.||.+++..|++.|. +|++++++... .. .+. ....|+....++.++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-------~Vi~~~r~~~~--~~----~~~----~~~~D~~~~~~i~~~~~~~~ 67 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-------NVINFDIKEPS--YN----DVD----YFKVDVSNKEQVIKGIDYVI 67 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------eEEEEeCCccc--cC----ceE----EEEccCCCHHHHHHHHHHHH
Confidence 457899999999999999999999885 78888875321 10 000 011233332233222
Q ss_pred --hCCCcEEEEecCCCCC---CCCChh---HHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHHHCCCC
Q 019990 79 --CKDVNIAVMVGGFPRK---EGMERK---DVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKEFAPSI 148 (332)
Q Consensus 79 --~~~aDiVi~~ag~~~~---~~~~~~---~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~~~~~~ 148 (332)
+...|++||.||.... ...+.+ ..+..|+.....+.+++..+. ....++|++|+-... .+.
T Consensus 68 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~---------~~~ 138 (258)
T PRK06398 68 SKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSF---------AVT 138 (258)
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhc---------cCC
Confidence 2368999999987421 112222 245677776655555544321 124566776652211 122
Q ss_pred CCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEec
Q 019990 149 PAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGN 187 (332)
Q Consensus 149 ~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~ 187 (332)
+....|+.++.....+.+.++..++ +. |+. +.+.+
T Consensus 139 ~~~~~Y~~sKaal~~~~~~la~e~~--~~-i~v-n~i~P 173 (258)
T PRK06398 139 RNAAAYVTSKHAVLGLTRSIAVDYA--PT-IRC-VAVCP 173 (258)
T ss_pred CCCchhhhhHHHHHHHHHHHHHHhC--CC-CEE-EEEec
Confidence 3344678888888888888888876 23 664 33443
No 203
>PRK05866 short chain dehydrogenase; Provisional
Probab=98.33 E-value=1.1e-05 Score=73.89 Aligned_cols=151 Identities=16% Similarity=0.129 Sum_probs=85.4
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc---cCCccceEEeCCHHHHhC
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA---FPLLKGVVATTDVVEACK 80 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~---~~~~~~v~~~~~~~~a~~ 80 (332)
+.++|+||||+|+||.+++..|++.|. +|.+++++. +.+.....++.... .....|+....++.+.++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-------~Vi~~~R~~--~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~ 109 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-------TVVAVARRE--DLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVA 109 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence 347899999999999999999998875 899999863 23333322332111 011234433333333333
Q ss_pred -------CCcEEEEecCCCCCC--CC---Ch---hHHHhhhHHHHHHHH----HHHHhhcCCCcEEEEEeCChhhHHHHH
Q 019990 81 -------DVNIAVMVGGFPRKE--GM---ER---KDVMSKNVSIYKAQA----SALEKHAAPNCKVLVVANPANTNALIL 141 (332)
Q Consensus 81 -------~aDiVi~~ag~~~~~--~~---~~---~~~~~~N~~~~~~i~----~~i~~~~~~~~~viv~snp~~~~~~~~ 141 (332)
..|++|+.||..... .+ +. ...+..|......+. ..+++.+ ...++++|+- .. .
T Consensus 110 ~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--~g~iv~isS~-~~----~ 182 (293)
T PRK05866 110 DVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG--DGHIINVATW-GV----L 182 (293)
T ss_pred HHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CcEEEEECCh-hh----c
Confidence 789999999864211 11 11 124556665544444 4444432 3466666642 11 0
Q ss_pred HHHCCCCCCCcEEEeecccHHHHHHHHHHHcC
Q 019990 142 KEFAPSIPAKNITCLTRLDHNRAMGQISERLK 173 (332)
Q Consensus 142 ~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~ 173 (332)
. ...+....|+.++.....+...++..+.
T Consensus 183 ~---~~~p~~~~Y~asKaal~~l~~~la~e~~ 211 (293)
T PRK05866 183 S---EASPLFSVYNASKAALSAVSRVIETEWG 211 (293)
T ss_pred C---CCCCCcchHHHHHHHHHHHHHHHHHHhc
Confidence 0 1123233577788777777777777654
No 204
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=98.31 E-value=5.5e-06 Score=74.49 Aligned_cols=150 Identities=14% Similarity=0.129 Sum_probs=86.3
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHHh-
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEAC- 79 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a~- 79 (332)
..++++||||+|+||.+++..|++.|. ++++.+... +.+.....++.... . .+..|++...++.+++
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-------~vv~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 79 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-------TIVFNDINQ--ELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVS 79 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence 357899999999999999999998885 788888753 23333223332211 0 1123443333333332
Q ss_pred ------CCCcEEEEecCCCCC-C--CCChh---HHHhhhHHHHHHHHH----HHHhhcCCCcEEEEEeCChhhHHHHHHH
Q 019990 80 ------KDVNIAVMVGGFPRK-E--GMERK---DVMSKNVSIYKAQAS----ALEKHAAPNCKVLVVANPANTNALILKE 143 (332)
Q Consensus 80 ------~~aDiVi~~ag~~~~-~--~~~~~---~~~~~N~~~~~~i~~----~i~~~~~~~~~viv~snp~~~~~~~~~~ 143 (332)
...|++||.||.... + ..+.. ..+..|......+.+ .+.+. ...+++++++....
T Consensus 80 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g~iv~isS~~~~------- 150 (265)
T PRK07097 80 QIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKK--GHGKIINICSMMSE------- 150 (265)
T ss_pred HHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc--CCcEEEEEcCcccc-------
Confidence 347999999987421 1 12222 234556654443333 34332 24577777764321
Q ss_pred HCCCCCCCcEEEeecccHHHHHHHHHHHcC
Q 019990 144 FAPSIPAKNITCLTRLDHNRAMGQISERLK 173 (332)
Q Consensus 144 ~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~ 173 (332)
.+.+....|+.++.....+.+.+++.++
T Consensus 151 --~~~~~~~~Y~~sKaal~~l~~~la~e~~ 178 (265)
T PRK07097 151 --LGRETVSAYAAAKGGLKMLTKNIASEYG 178 (265)
T ss_pred --CCCCCCccHHHHHHHHHHHHHHHHHHhh
Confidence 1223334678888777788888887764
No 205
>PRK08339 short chain dehydrogenase; Provisional
Probab=98.31 E-value=1.7e-05 Score=71.44 Aligned_cols=156 Identities=14% Similarity=0.227 Sum_probs=90.3
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh---cc-CCccceEEeCCHHHHh
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA---AF-PLLKGVVATTDVVEAC 79 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~---~~-~~~~~v~~~~~~~~a~ 79 (332)
+.+.++||||+|.||.+++..|++.|. +|.++|++. +.+.....++... .. .+..|+....++.+.+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~ 77 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-------DVILLSRNE--ENLKKAREKIKSESNVDVSYIVADLTKREDLERTV 77 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHH
Confidence 346789999999999999999999885 789998753 2333333333221 11 1123444433333333
Q ss_pred ------CCCcEEEEecCCCCCC---CCChhH---HHhhhHH----HHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHH
Q 019990 80 ------KDVNIAVMVGGFPRKE---GMERKD---VMSKNVS----IYKAQASALEKHAAPNCKVLVVANPANTNALILKE 143 (332)
Q Consensus 80 ------~~aDiVi~~ag~~~~~---~~~~~~---~~~~N~~----~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~ 143 (332)
...|++|+.+|..... ..+.++ .+..|+. .++.+++.+++.. .+++|++|+....
T Consensus 78 ~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~--~g~Ii~isS~~~~------- 148 (263)
T PRK08339 78 KELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG--FGRIIYSTSVAIK------- 148 (263)
T ss_pred HHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CCEEEEEcCcccc-------
Confidence 2579999999874321 122222 3455543 3456666665542 3577777753211
Q ss_pred HCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 144 FAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 144 ~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.++-.-..+.+.+++.++ +..||.
T Consensus 149 --~~~~~~~~y~asKaal~~l~~~la~el~--~~gIrV 182 (263)
T PRK08339 149 --EPIPNIALSNVVRISMAGLVRTLAKELG--PKGITV 182 (263)
T ss_pred --CCCCcchhhHHHHHHHHHHHHHHHHHhc--ccCeEE
Confidence 1122222466677666777777887765 456663
No 206
>PRK07035 short chain dehydrogenase; Provisional
Probab=98.30 E-value=7.7e-06 Score=72.83 Aligned_cols=159 Identities=13% Similarity=0.056 Sum_probs=89.1
Q ss_pred CCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc---CCccceEEeCCHHHH
Q 019990 2 AKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF---PLLKGVVATTDVVEA 78 (332)
Q Consensus 2 ~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~---~~~~~v~~~~~~~~a 78 (332)
+.+.++|+||||+|+||.+++..|.+.|. +|++++++. +.+.....++.+... ....++....+..++
T Consensus 5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 75 (252)
T PRK07035 5 DLTGKIALVTGASRGIGEAIAKLLAQQGA-------HVIVSSRKL--DGCQAVADAIVAAGGKAEALACHIGEMEQIDAL 75 (252)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence 34557899999999999999999998875 799999753 233333333322110 011233322222222
Q ss_pred -------hCCCcEEEEecCCCC--C--CCCChh---HHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHH
Q 019990 79 -------CKDVNIAVMVGGFPR--K--EGMERK---DVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILK 142 (332)
Q Consensus 79 -------~~~aDiVi~~ag~~~--~--~~~~~~---~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~ 142 (332)
+...|++||.||... . ...+.+ ..++.|......+.+++..+. ....+++++++....
T Consensus 76 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~------ 149 (252)
T PRK07035 76 FAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGV------ 149 (252)
T ss_pred HHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhc------
Confidence 235799999998521 1 112222 245667666555554443321 123466666642111
Q ss_pred HHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCee
Q 019990 143 EFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVK 180 (332)
Q Consensus 143 ~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~ 180 (332)
.+.+....|+.+|.....+...+++.++ +..|+
T Consensus 150 ---~~~~~~~~Y~~sK~al~~~~~~l~~e~~--~~gi~ 182 (252)
T PRK07035 150 ---SPGDFQGIYSITKAAVISMTKAFAKECA--PFGIR 182 (252)
T ss_pred ---CCCCCCcchHHHHHHHHHHHHHHHHHHh--hcCEE
Confidence 1123333577788777777777877764 34455
No 207
>PRK06181 short chain dehydrogenase; Provisional
Probab=98.30 E-value=5.7e-06 Score=74.16 Aligned_cols=149 Identities=20% Similarity=0.171 Sum_probs=83.8
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc---CCccceEEeCCHHHHh---
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF---PLLKGVVATTDVVEAC--- 79 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~---~~~~~v~~~~~~~~a~--- 79 (332)
++|+||||+|++|++++..|++.+. +|.+++++. +.......++..... ....|+.....+.+++
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~-------~Vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 72 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGA-------QLVLAARNE--TRLASLAQELADHGGEALVVPTDVSDAEACERLIEAA 72 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 5799999999999999999998875 788888753 222222223322110 0112333333333332
Q ss_pred ----CCCcEEEEecCCCCCC---CC-Ch---hHHHhhhHHHHHHHHHHHHhhc-CCCcEEEEEeCChhhHHHHHHHHCCC
Q 019990 80 ----KDVNIAVMVGGFPRKE---GM-ER---KDVMSKNVSIYKAQASALEKHA-APNCKVLVVANPANTNALILKEFAPS 147 (332)
Q Consensus 80 ----~~aDiVi~~ag~~~~~---~~-~~---~~~~~~N~~~~~~i~~~i~~~~-~~~~~viv~snp~~~~~~~~~~~~~~ 147 (332)
.+.|+|||++|..... .. +. ...++.|......+++.+..+- ....+++++|+.... .+
T Consensus 73 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~---------~~ 143 (263)
T PRK06181 73 VARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGL---------TG 143 (263)
T ss_pred HHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEeccccc---------CC
Confidence 3679999999864321 11 22 2346778887777777765431 112456666654321 11
Q ss_pred CCCCcEEEeecccHHHHHHHHHHHc
Q 019990 148 IPAKNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 148 ~~~~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
.++...|+.++.....+...++..+
T Consensus 144 ~~~~~~Y~~sK~~~~~~~~~l~~~~ 168 (263)
T PRK06181 144 VPTRSGYAASKHALHGFFDSLRIEL 168 (263)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHh
Confidence 2222345666665555655555554
No 208
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=98.30 E-value=5.6e-06 Score=73.96 Aligned_cols=155 Identities=13% Similarity=0.131 Sum_probs=88.6
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHHh-
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEAC- 79 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a~- 79 (332)
+.++++||||+|.||.+++..|++.|. +|++++++.. +.+. ..+.... . ....|+....+..+.+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-------~vv~~~~~~~-~~~~---~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 75 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-------DIVGVGVAEA-PETQ---AQVEALGRKFHFITADLIQQKDIDSIVS 75 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEecCchH-HHHH---HHHHHcCCeEEEEEeCCCCHHHHHHHHH
Confidence 457899999999999999999999886 7888886431 1111 1121111 1 1123444333333333
Q ss_pred ------CCCcEEEEecCCCCCC---CCChh---HHHhhhHHHHHHHHHH----HHhhcCCCcEEEEEeCChhhHHHHHHH
Q 019990 80 ------KDVNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKAQASA----LEKHAAPNCKVLVVANPANTNALILKE 143 (332)
Q Consensus 80 ------~~aDiVi~~ag~~~~~---~~~~~---~~~~~N~~~~~~i~~~----i~~~~~~~~~viv~snp~~~~~~~~~~ 143 (332)
...|++|+.||..... ..+.. ..+..|+.....+.+. +.+.. ..+++|++++....
T Consensus 76 ~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-~~g~ii~isS~~~~------- 147 (251)
T PRK12481 76 QAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQG-NGGKIINIASMLSF------- 147 (251)
T ss_pred HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcC-CCCEEEEeCChhhc-------
Confidence 3579999999874321 11222 3456776555444444 33322 23567777653221
Q ss_pred HCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 144 FAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 144 ~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.+|.....+.+.++..+. +..|+.
T Consensus 148 --~~~~~~~~Y~asK~a~~~l~~~la~e~~--~~girv 181 (251)
T PRK12481 148 --QGGIRVPSYTASKSAVMGLTRALATELS--QYNINV 181 (251)
T ss_pred --CCCCCCcchHHHHHHHHHHHHHHHHHHh--hcCeEE
Confidence 1122223578888888888888887754 345664
No 209
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=98.29 E-value=1.3e-05 Score=71.67 Aligned_cols=156 Identities=15% Similarity=0.135 Sum_probs=88.2
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHHh-
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEAC- 79 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a~- 79 (332)
..+.++||||+|.||++++..|++.|. +|+++|.....+ ...++.... . ....|+....++.+.+
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-------~vv~~~~~~~~~----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 77 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-------DIVGINIVEPTE----TIEQVTALGRRFLSLTADLRKIDGIPALLE 77 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEecCcchHH----HHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence 356899999999999999999998875 788887643211 111221111 0 1122443333333322
Q ss_pred ------CCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHHHhhc---CCCcEEEEEeCChhhHHHHHHHH
Q 019990 80 ------KDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEKHA---APNCKVLVVANPANTNALILKEF 144 (332)
Q Consensus 80 ------~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i~~~~---~~~~~viv~snp~~~~~~~~~~~ 144 (332)
...|++||.||..... +.+. ...+..|......+.+.+...- .+.+.++++|+-.. .
T Consensus 78 ~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~---~----- 149 (253)
T PRK08993 78 RAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLS---F----- 149 (253)
T ss_pred HHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhh---c-----
Confidence 3589999999874311 1122 2356678776655555544321 12356676665221 1
Q ss_pred CCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 145 APSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 145 ~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.+|.....+.+.++..+. +..|+.
T Consensus 150 -~~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~gi~v 183 (253)
T PRK08993 150 -QGGIRVPSYTASKSGVMGVTRLMANEWA--KHNINV 183 (253)
T ss_pred -cCCCCCcchHHHHHHHHHHHHHHHHHhh--hhCeEE
Confidence 1112223578888777777777777754 445654
No 210
>PRK07023 short chain dehydrogenase; Provisional
Probab=98.29 E-value=2.1e-06 Score=76.11 Aligned_cols=156 Identities=13% Similarity=0.118 Sum_probs=83.7
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHh-----
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEAC----- 79 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~----- 79 (332)
||+|+||||+|+||++++..|++.|. ++.+++++...+ + .............|+....++.+++
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~-------~v~~~~r~~~~~-~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 69 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGI-------AVLGVARSRHPS-L---AAAAGERLAEVELDLSDAAAAAAWLAGDLL 69 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCC-------EEEEEecCcchh-h---hhccCCeEEEEEeccCCHHHHHHHHHHHHH
Confidence 46899999999999999999998875 788888754211 1 0000000001122333333333322
Q ss_pred ------CCCcEEEEecCCCCC--C--CCCh---hHHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHHH
Q 019990 80 ------KDVNIAVMVGGFPRK--E--GMER---KDVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKEF 144 (332)
Q Consensus 80 ------~~aDiVi~~ag~~~~--~--~~~~---~~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~~ 144 (332)
...|++||.+|.... + ..+. .+.+..|+.....+.+.+.+.. ....+++++|+....
T Consensus 70 ~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-------- 141 (243)
T PRK07023 70 AAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAAR-------- 141 (243)
T ss_pred HHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhc--------
Confidence 146899999986321 1 1122 2345667766444444443321 123466666652110
Q ss_pred CCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeE
Q 019990 145 APSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVI 183 (332)
Q Consensus 145 ~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~ 183 (332)
.+.+....|+.++...+.+...++.. .+..++...
T Consensus 142 -~~~~~~~~Y~~sK~a~~~~~~~~~~~---~~~~i~v~~ 176 (243)
T PRK07023 142 -NAYAGWSVYCATKAALDHHARAVALD---ANRALRIVS 176 (243)
T ss_pred -CCCCCchHHHHHHHHHHHHHHHHHhc---CCCCcEEEE
Confidence 12333335666776666666666655 345566443
No 211
>PRK07109 short chain dehydrogenase; Provisional
Probab=98.29 E-value=1.2e-05 Score=75.15 Aligned_cols=159 Identities=17% Similarity=0.117 Sum_probs=89.2
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc---CCccceEEeCCHHHH---
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF---PLLKGVVATTDVVEA--- 78 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~---~~~~~v~~~~~~~~a--- 78 (332)
+++|+||||+|.||.+++..|++.|. +|++++++. +.+.....++..... ....|+....++.++
T Consensus 8 ~k~vlITGas~gIG~~la~~la~~G~-------~Vvl~~R~~--~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~ 78 (334)
T PRK07109 8 RQVVVITGASAGVGRATARAFARRGA-------KVVLLARGE--EGLEALAAEIRAAGGEALAVVADVADAEAVQAAADR 78 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHH
Confidence 46899999999999999999998885 789998753 233333333322110 112344433333333
Q ss_pred ----hCCCcEEEEecCCCCCC---CCChh---HHHhhhHH----HHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHH
Q 019990 79 ----CKDVNIAVMVGGFPRKE---GMERK---DVMSKNVS----IYKAQASALEKHAAPNCKVLVVANPANTNALILKEF 144 (332)
Q Consensus 79 ----~~~aDiVi~~ag~~~~~---~~~~~---~~~~~N~~----~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~ 144 (332)
+...|++|+.||..... ..+.+ ..++.|.. .++.+++.+.+.. ...+|++|+-...
T Consensus 79 ~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~--~g~iV~isS~~~~-------- 148 (334)
T PRK07109 79 AEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD--RGAIIQVGSALAY-------- 148 (334)
T ss_pred HHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CcEEEEeCChhhc--------
Confidence 23689999999863211 12222 23445543 3445555555532 3466766653211
Q ss_pred CCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeE
Q 019990 145 APSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVI 183 (332)
Q Consensus 145 ~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~ 183 (332)
.+.+....|+.+|.....+...++..+......|+...
T Consensus 149 -~~~~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~ 186 (334)
T PRK07109 149 -RSIPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTM 186 (334)
T ss_pred -cCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEE
Confidence 11222234566776666777777766654434566443
No 212
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=98.29 E-value=4.1e-06 Score=74.87 Aligned_cols=114 Identities=17% Similarity=0.152 Sum_probs=68.8
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc-CCccceEE-eCCHHHHh-C
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF-PLLKGVVA-TTDVVEAC-K 80 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~-~~~~~~a~-~ 80 (332)
++++|+||||+|+||++++..|++.++ +|+.+.++.. .......+ .... ....|+.. ..++.+++ .
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~-------~V~~~~R~~~--~~~~~~~~--~~~~~~~~~Dl~d~~~~l~~~~~~ 84 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGF-------AVKAGVRDVD--KAKTSLPQ--DPSLQIVRADVTEGSDKLVEAIGD 84 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCC-------EEEEEecCHH--HHHHhccc--CCceEEEEeeCCCCHHHHHHHhhc
Confidence 478999999999999999999998775 7777665431 11111000 0001 11123332 12345566 6
Q ss_pred CCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeC
Q 019990 81 DVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVAN 132 (332)
Q Consensus 81 ~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~sn 132 (332)
++|+||+++|.....+ + ......|......+++++.+.+ . .+++++|.
T Consensus 85 ~~d~vi~~~g~~~~~~-~-~~~~~~n~~~~~~ll~a~~~~~-~-~~iV~iSS 132 (251)
T PLN00141 85 DSDAVICATGFRRSFD-P-FAPWKVDNFGTVNLVEACRKAG-V-TRFILVSS 132 (251)
T ss_pred CCCEEEECCCCCcCCC-C-CCceeeehHHHHHHHHHHHHcC-C-CEEEEEcc
Confidence 8999999887643211 1 1123556667788888888764 2 36666554
No 213
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=98.29 E-value=4.7e-06 Score=75.45 Aligned_cols=155 Identities=13% Similarity=0.121 Sum_probs=87.5
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh--cc-CCccceEEeCCHHHH---
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA--AF-PLLKGVVATTDVVEA--- 78 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~--~~-~~~~~v~~~~~~~~a--- 78 (332)
.++++||||+|+||++++..|++.|. +|+++|++. +.++....++.+. .. .+..|+....++.++
T Consensus 10 ~k~vlVtGas~giG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~ 80 (278)
T PRK08277 10 GKVAVITGGGGVLGGAMAKELARAGA-------KVAILDRNQ--EKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQ 80 (278)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence 46899999999999999999998886 789999753 2233222233221 00 112333332222222
Q ss_pred ----hCCCcEEEEecCCCCCC------------------CCChh---HHHhhhHHHHH----HHHHHHHhhcCCCcEEEE
Q 019990 79 ----CKDVNIAVMVGGFPRKE------------------GMERK---DVMSKNVSIYK----AQASALEKHAAPNCKVLV 129 (332)
Q Consensus 79 ----~~~aDiVi~~ag~~~~~------------------~~~~~---~~~~~N~~~~~----~i~~~i~~~~~~~~~viv 129 (332)
+...|++||.||..... ..+.. ..+..|+.... .+++.+.+. +.+.+|+
T Consensus 81 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~g~ii~ 158 (278)
T PRK08277 81 ILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGR--KGGNIIN 158 (278)
T ss_pred HHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc--CCcEEEE
Confidence 24689999999853210 11111 23455655443 344444443 2356677
Q ss_pred EeCChhhHHHHHHHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 130 VANPANTNALILKEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 130 ~snp~~~~~~~~~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
+|+.... .+.+....|+.+|.....+.+.++..+.- ..+|.
T Consensus 159 isS~~~~---------~~~~~~~~Y~~sK~a~~~l~~~la~e~~~--~girv 199 (278)
T PRK08277 159 ISSMNAF---------TPLTKVPAYSAAKAAISNFTQWLAVHFAK--VGIRV 199 (278)
T ss_pred Eccchhc---------CCCCCCchhHHHHHHHHHHHHHHHHHhCc--cCeEE
Confidence 6653211 12333335777887777787788877653 45653
No 214
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.28 E-value=1.6e-05 Score=72.53 Aligned_cols=107 Identities=20% Similarity=0.259 Sum_probs=68.3
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhh----hhhc----c------CCc
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMEL----IDAA----F------PLL 66 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl----~~~~----~------~~~ 66 (332)
|++++.||+|+| +|.+|+.++..|+..|+ +|+++|.++. .+......+ .... . ...
T Consensus 1 ~~~~~~~V~ViG-aG~mG~~iA~~~a~~G~-------~V~l~d~~~~--~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~ 70 (286)
T PRK07819 1 MSDAIQRVGVVG-AGQMGAGIAEVCARAGV-------DVLVFETTEE--LATAGRNRIEKSLERAVSRGKLTERERDAAL 70 (286)
T ss_pred CCCCccEEEEEc-ccHHHHHHHHHHHhCCC-------EEEEEECCHH--HHHHHHHHHHHHHHHHHhcccCChhhHHHHH
Confidence 777778999999 69999999999998886 8999998752 222111111 1110 0 012
Q ss_pred cceEEeCCHHHHhCCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhc-CCCcEEEEEeCCh
Q 019990 67 KGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHA-APNCKVLVVANPA 134 (332)
Q Consensus 67 ~~v~~~~~~~~a~~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~-~~~~~viv~snp~ 134 (332)
.+++..+++ +++++||+||-+. + .+.+.-+.+...+.+.+ +|++ |++||..
T Consensus 71 ~~l~~~~~~-~~~~~~d~ViEav--~------------E~~~~K~~l~~~l~~~~~~~~~--il~snTS 122 (286)
T PRK07819 71 ARLRFTTDL-GDFADRQLVIEAV--V------------EDEAVKTEIFAELDKVVTDPDA--VLASNTS 122 (286)
T ss_pred hCeEeeCCH-HHhCCCCEEEEec--c------------cCHHHHHHHHHHHHHhhCCCCc--EEEECCC
Confidence 456666777 6789999999763 1 12333455566777775 5665 4455543
No 215
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.28 E-value=1.1e-05 Score=72.16 Aligned_cols=159 Identities=14% Similarity=0.098 Sum_probs=89.4
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc-CCccceEEeCCHHHHh---
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF-PLLKGVVATTDVVEAC--- 79 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~a~--- 79 (332)
..++++||||+|.||++++..|.+.|. ++.+.+.+.. +... ++.+... ....|+....++.+++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-------~v~~~~~~~~-~~~~----~l~~~~~~~~~~Dl~~~~~~~~~~~~~ 73 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-------KVAVLYNSAE-NEAK----ELREKGVFTIKCDVGNRDQVKKSKEVV 73 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCcH-HHHH----HHHhCCCeEEEecCCCHHHHHHHHHHH
Confidence 457899999999999999999998875 6777665321 1111 1211111 1122343333333332
Q ss_pred ----CCCcEEEEecCCCCCC---CCChh---HHHhhhHHH----HHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHC
Q 019990 80 ----KDVNIAVMVGGFPRKE---GMERK---DVMSKNVSI----YKAQASALEKHAAPNCKVLVVANPANTNALILKEFA 145 (332)
Q Consensus 80 ----~~aDiVi~~ag~~~~~---~~~~~---~~~~~N~~~----~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~ 145 (332)
...|+|||.||..... ..+.. ..++.|+.. ++.+++.+++. ....+|++|+.... .
T Consensus 74 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~--~~g~iv~isS~~~~--------~ 143 (255)
T PRK06463 74 EKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS--KNGAIVNIASNAGI--------G 143 (255)
T ss_pred HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc--CCcEEEEEcCHHhC--------C
Confidence 3679999999874311 11222 345667666 45555555543 23566666652210 0
Q ss_pred CCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEec
Q 019990 146 PSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGN 187 (332)
Q Consensus 146 ~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~ 187 (332)
...+....|+.+|.....+.+.++..+. +..|+. +.+.+
T Consensus 144 ~~~~~~~~Y~asKaa~~~~~~~la~e~~--~~~i~v-~~i~P 182 (255)
T PRK06463 144 TAAEGTTFYAITKAGIIILTRRLAFELG--KYGIRV-NAVAP 182 (255)
T ss_pred CCCCCccHhHHHHHHHHHHHHHHHHHhh--hcCeEE-EEEee
Confidence 1112223578888877788888877654 455664 33444
No 216
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.28 E-value=4.8e-06 Score=73.30 Aligned_cols=156 Identities=13% Similarity=0.043 Sum_probs=89.6
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEe-CCHHHHh
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVAT-TDVVEAC 79 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~-~~~~~a~ 79 (332)
|..+.++++||||+|+||++++..|++.|. ++++++++... ... ... .....|+... ....+.+
T Consensus 1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~-------~v~~~~r~~~~-~~~------~~~-~~~~~D~~~~~~~~~~~~ 65 (235)
T PRK06550 1 QEFMTKTVLITGAASGIGLAQARAFLAQGA-------QVYGVDKQDKP-DLS------GNF-HFLQLDLSDDLEPLFDWV 65 (235)
T ss_pred CCCCCCEEEEcCCCchHHHHHHHHHHHCCC-------EEEEEeCCccc-ccC------CcE-EEEECChHHHHHHHHHhh
Confidence 666667899999999999999999998875 78888875321 100 000 0011122211 1222334
Q ss_pred CCCcEEEEecCCCC--CC--CCCh---hHHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHHHCCCCCC
Q 019990 80 KDVNIAVMVGGFPR--KE--GMER---KDVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKEFAPSIPA 150 (332)
Q Consensus 80 ~~aDiVi~~ag~~~--~~--~~~~---~~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~~~~~~~~ 150 (332)
...|+||+.||... .+ ..+. ...+..|+.....+.+.+.... .+..+++++|+.... .+.+.
T Consensus 66 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~---------~~~~~ 136 (235)
T PRK06550 66 PSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASF---------VAGGG 136 (235)
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhc---------cCCCC
Confidence 57899999998632 11 1222 2346677776666666554321 123466666643211 11222
Q ss_pred CcEEEeecccHHHHHHHHHHHcCCCCCCeeee
Q 019990 151 KNITCLTRLDHNRAMGQISERLKVHVSDVKNV 182 (332)
Q Consensus 151 ~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~ 182 (332)
...|+.++.....+...+++.+. +..++..
T Consensus 137 ~~~Y~~sK~a~~~~~~~la~~~~--~~gi~v~ 166 (235)
T PRK06550 137 GAAYTASKHALAGFTKQLALDYA--KDGIQVF 166 (235)
T ss_pred CcccHHHHHHHHHHHHHHHHHhh--hcCeEEE
Confidence 33577788777777777887764 3456643
No 217
>PRK05884 short chain dehydrogenase; Provisional
Probab=98.28 E-value=1.2e-05 Score=70.49 Aligned_cols=150 Identities=12% Similarity=0.103 Sum_probs=86.3
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhC----C
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACK----D 81 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~----~ 81 (332)
||++||||+|.||++++..|.+.+. ++++++++. +.+.....++. . .....|+....++.++++ .
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~-~-~~~~~D~~~~~~v~~~~~~~~~~ 69 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGH-------KVTLVGARR--DDLEVAAKELD-V-DAIVCDNTDPASLEEARGLFPHH 69 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHhcc-C-cEEecCCCCHHHHHHHHHHHhhc
Confidence 3799999999999999999998875 788888753 22322222211 0 011234444334443332 5
Q ss_pred CcEEEEecCCCCC---C-----CCCh---hHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCC
Q 019990 82 VNIAVMVGGFPRK---E-----GMER---KDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPA 150 (332)
Q Consensus 82 aDiVi~~ag~~~~---~-----~~~~---~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~ 150 (332)
.|++|+.+|.... + ..+. ...++.|+...-.+.+++...-...+.++++++.. .+.
T Consensus 70 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~-------------~~~ 136 (223)
T PRK05884 70 LDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN-------------PPA 136 (223)
T ss_pred CcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC-------------CCC
Confidence 7999999874210 0 0111 23456676555555555544321235666666421 112
Q ss_pred CcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 151 KNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 151 ~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
...|+.+|-.-..+.+.+++.+. +..||.
T Consensus 137 ~~~Y~asKaal~~~~~~la~e~~--~~gI~v 165 (223)
T PRK05884 137 GSAEAAIKAALSNWTAGQAAVFG--TRGITI 165 (223)
T ss_pred ccccHHHHHHHHHHHHHHHHHhh--hcCeEE
Confidence 23577788877788888887765 345653
No 218
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=98.27 E-value=8.2e-06 Score=69.27 Aligned_cols=101 Identities=23% Similarity=0.361 Sum_probs=64.6
Q ss_pred EEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhh---hHhh-hhhh----cc------CCccceEEe
Q 019990 7 RVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNG---VKME-LIDA----AF------PLLKGVVAT 72 (332)
Q Consensus 7 kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~---~~~d-l~~~----~~------~~~~~v~~~ 72 (332)
||+|+| +|.+|+.++..++..|+ +|+++|.+.. .+.. ...+ +... .. .....++..
T Consensus 1 ~V~ViG-aG~mG~~iA~~~a~~G~-------~V~l~d~~~~--~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 70 (180)
T PF02737_consen 1 KVAVIG-AGTMGRGIAALFARAGY-------EVTLYDRSPE--ALERARKRIERLLDRLVRKGRLSQEEADAALARISFT 70 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTS-------EEEEE-SSHH--HHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEEE
T ss_pred CEEEEc-CCHHHHHHHHHHHhCCC-------cEEEEECChH--HHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhcccc
Confidence 699999 69999999999999886 9999998652 2221 1111 1111 00 013577878
Q ss_pred CCHHHHhCCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCCh
Q 019990 73 TDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPA 134 (332)
Q Consensus 73 ~~~~~a~~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~ 134 (332)
+++.++. +||+||-+. ..+.+.-+++...+.+.++|++ +++||..
T Consensus 71 ~dl~~~~-~adlViEai--------------~E~l~~K~~~~~~l~~~~~~~~--ilasnTS 115 (180)
T PF02737_consen 71 TDLEEAV-DADLVIEAI--------------PEDLELKQELFAELDEICPPDT--ILASNTS 115 (180)
T ss_dssp SSGGGGC-TESEEEE-S---------------SSHHHHHHHHHHHHCCS-TTS--EEEE--S
T ss_pred cCHHHHh-hhheehhhc--------------cccHHHHHHHHHHHHHHhCCCc--eEEecCC
Confidence 8887655 999999753 1135556788889999886776 5567643
No 219
>PRK08589 short chain dehydrogenase; Validated
Probab=98.27 E-value=9.6e-06 Score=73.34 Aligned_cols=154 Identities=10% Similarity=0.041 Sum_probs=88.3
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHH--
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEA-- 78 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a-- 78 (332)
+.++++||||+|.||.+++..|++.|. +|++++++. .+.....++.+.. . ....|+....++.++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-------~vi~~~r~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 74 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-------YVLAVDIAE---AVSETVDKIKSNGGKAKAYHVDISDEQQVKDFAS 74 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCcH---HHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHH
Confidence 457899999999999999999999885 889998752 2333333332211 1 112334333233222
Q ss_pred -----hCCCcEEEEecCCCCCC----CCChh---HHHhhhHHHHH----HHHHHHHhhcCCCcEEEEEeCChhhHHHHHH
Q 019990 79 -----CKDVNIAVMVGGFPRKE----GMERK---DVMSKNVSIYK----AQASALEKHAAPNCKVLVVANPANTNALILK 142 (332)
Q Consensus 79 -----~~~aDiVi~~ag~~~~~----~~~~~---~~~~~N~~~~~----~i~~~i~~~~~~~~~viv~snp~~~~~~~~~ 142 (332)
+...|++|+.||..... ..+.. ..+..|+.... .+.+.+.+. +++++++|+....
T Consensus 75 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~g~iv~isS~~~~------ 145 (272)
T PRK08589 75 EIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ---GGSIINTSSFSGQ------ 145 (272)
T ss_pred HHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCEEEEeCchhhc------
Confidence 23579999999874321 12222 23445655443 334444332 2567777653221
Q ss_pred HHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 143 EFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 143 ~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.+|.....+.+.+++.++ +..|+.
T Consensus 146 ---~~~~~~~~Y~asKaal~~l~~~la~e~~--~~gI~v 179 (272)
T PRK08589 146 ---AADLYRSGYNAAKGAVINFTKSIAIEYG--RDGIRA 179 (272)
T ss_pred ---CCCCCCchHHHHHHHHHHHHHHHHHHhh--hcCeEE
Confidence 1122223567788777888888888764 455664
No 220
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=98.27 E-value=5.6e-06 Score=74.41 Aligned_cols=153 Identities=12% Similarity=0.086 Sum_probs=88.2
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHH----
Q 019990 3 KNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEA---- 78 (332)
Q Consensus 3 ~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a---- 78 (332)
.+.++++||||+|+||.+++..|++.|. ++++.|++.. ..... .. .....|+....++.+.
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~~~G~-------~v~~~~~~~~--~~~~~-----~~-~~~~~D~~~~~~~~~~~~~~ 71 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELLANGA-------NVVNADIHGG--DGQHE-----NY-QFVPTDVSSAEEVNHTVAEI 71 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCcc--ccccC-----ce-EEEEccCCCHHHHHHHHHHH
Confidence 3457899999999999999999998885 7888887542 11110 00 0011233332233222
Q ss_pred ---hCCCcEEEEecCCCCCC------------CCChh---HHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHH
Q 019990 79 ---CKDVNIAVMVGGFPRKE------------GMERK---DVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNA 138 (332)
Q Consensus 79 ---~~~aDiVi~~ag~~~~~------------~~~~~---~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~ 138 (332)
+...|++||+||..... ..+.+ ..+..|+.....+.+++..+- .....+|++|+....
T Consensus 72 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~-- 149 (266)
T PRK06171 72 IEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGL-- 149 (266)
T ss_pred HHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEcccccc--
Confidence 23579999999863210 11222 245677777666666665432 123456666653221
Q ss_pred HHHHHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 139 LILKEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 139 ~~~~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.+|.....+.+.+++.+. +..|+.
T Consensus 150 -------~~~~~~~~Y~~sK~a~~~l~~~la~e~~--~~gi~v 183 (266)
T PRK06171 150 -------EGSEGQSCYAATKAALNSFTRSWAKELG--KHNIRV 183 (266)
T ss_pred -------CCCCCCchhHHHHHHHHHHHHHHHHHhh--hcCeEE
Confidence 1122233567777776777777777764 455664
No 221
>PRK09291 short chain dehydrogenase; Provisional
Probab=98.26 E-value=8.6e-06 Score=72.66 Aligned_cols=147 Identities=14% Similarity=0.145 Sum_probs=80.7
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc---CCccceEEeCCHHHHhC-C
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF---PLLKGVVATTDVVEACK-D 81 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~---~~~~~v~~~~~~~~a~~-~ 81 (332)
++|+||||+|+||++++..|++.|. ++++.+++.. .+.....+...... ....|+....++.+++. +
T Consensus 3 ~~vlVtGasg~iG~~ia~~l~~~G~-------~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 73 (257)
T PRK09291 3 KTILITGAGSGFGREVALRLARKGH-------NVIAGVQIAP--QVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWD 73 (257)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCCHH--HHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCC
Confidence 5799999999999999999998875 7787776431 12111111111100 01124433334455554 7
Q ss_pred CcEEEEecCCCCCC---CCChh---HHHhhhHHHH----HHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCC
Q 019990 82 VNIAVMVGGFPRKE---GMERK---DVMSKNVSIY----KAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAK 151 (332)
Q Consensus 82 aDiVi~~ag~~~~~---~~~~~---~~~~~N~~~~----~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~ 151 (332)
.|+|||.||..... ..+.+ ..+..|+... +.+++.+.+.. ..++|++|+-... .+.+..
T Consensus 74 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~~SS~~~~---------~~~~~~ 142 (257)
T PRK09291 74 VDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG--KGKVVFTSSMAGL---------ITGPFT 142 (257)
T ss_pred CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CceEEEEcChhhc---------cCCCCc
Confidence 99999999864321 11222 2344565543 33444444443 2466766652211 112223
Q ss_pred cEEEeecccHHHHHHHHHHHc
Q 019990 152 NITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 152 ~i~~~t~l~~~r~~~~~a~~~ 172 (332)
..|+.++...+++...+++.+
T Consensus 143 ~~Y~~sK~a~~~~~~~l~~~~ 163 (257)
T PRK09291 143 GAYCASKHALEAIAEAMHAEL 163 (257)
T ss_pred chhHHHHHHHHHHHHHHHHHH
Confidence 356677777777766666553
No 222
>PRK05650 short chain dehydrogenase; Provisional
Probab=98.26 E-value=6.7e-06 Score=74.17 Aligned_cols=154 Identities=16% Similarity=0.095 Sum_probs=83.1
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHHh---
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEAC--- 79 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a~--- 79 (332)
++|+||||+|+||++++..|++.|. +|.+.+++. +.++....++.... . ....|+....++.+.+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i 71 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGW-------RLALADVNE--EGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQAC 71 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH
Confidence 4799999999999999999998875 788888753 23333323332211 0 1112333322333322
Q ss_pred ----CCCcEEEEecCCCCCC---CCChh---HHHhhhHHHHHH----HHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHC
Q 019990 80 ----KDVNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKA----QASALEKHAAPNCKVLVVANPANTNALILKEFA 145 (332)
Q Consensus 80 ----~~aDiVi~~ag~~~~~---~~~~~---~~~~~N~~~~~~----i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~ 145 (332)
...|+|||.||..... ..+.. ..+..|...... +.+.+++.. ..+++++|+....
T Consensus 72 ~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~vsS~~~~--------- 140 (270)
T PRK05650 72 EEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK--SGRIVNIASMAGL--------- 140 (270)
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC--CCEEEEECChhhc---------
Confidence 3689999999864321 12222 245667544444 444455442 3466666653211
Q ss_pred CCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 146 PSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 146 ~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.++....-+...++..+. +..++.
T Consensus 141 ~~~~~~~~Y~~sKaa~~~~~~~l~~e~~--~~gi~v 174 (270)
T PRK05650 141 MQGPAMSSYNVAKAGVVALSETLLVELA--DDEIGV 174 (270)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHhc--ccCcEE
Confidence 1222223456666655555556666543 344553
No 223
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=98.25 E-value=3.5e-05 Score=68.38 Aligned_cols=163 Identities=17% Similarity=0.178 Sum_probs=91.0
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccC----CccceEE--eCC---
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFP----LLKGVVA--TTD--- 74 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~----~~~~v~~--~~~--- 74 (332)
+.++|+||||+|+||.+++..|++.|. +|+++|++. +.+.....++.+.... ...++.. ..+
T Consensus 11 ~~k~vlItG~~g~iG~~la~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~ 81 (247)
T PRK08945 11 KDRIILVTGAGDGIGREAALTYARHGA-------TVILLGRTE--EKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQ 81 (247)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------cEEEEeCCH--HHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHH
Confidence 357899999999999999999998775 789999864 2233333334322110 0112221 111
Q ss_pred ----HHHHhCCCcEEEEecCCCCC--C--CCCh---hHHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHH
Q 019990 75 ----VVEACKDVNIAVMVGGFPRK--E--GMER---KDVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALIL 141 (332)
Q Consensus 75 ----~~~a~~~aDiVi~~ag~~~~--~--~~~~---~~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~ 141 (332)
+.+.+...|+|||.||.... + ..+. ...++.|+.....+.+.+..+. .+...+++.|+....
T Consensus 82 ~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~----- 156 (247)
T PRK08945 82 LADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGR----- 156 (247)
T ss_pred HHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhc-----
Confidence 22223468999999986321 1 1222 2346677776555555553221 123466666653211
Q ss_pred HHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEec
Q 019990 142 KEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGN 187 (332)
Q Consensus 142 ~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~ 187 (332)
.+.+....|+.++.....+...+++.+. ...++. +++.+
T Consensus 157 ----~~~~~~~~Y~~sK~a~~~~~~~~~~~~~--~~~i~~-~~v~p 195 (247)
T PRK08945 157 ----QGRANWGAYAVSKFATEGMMQVLADEYQ--GTNLRV-NCINP 195 (247)
T ss_pred ----CCCCCCcccHHHHHHHHHHHHHHHHHhc--ccCEEE-EEEec
Confidence 1223333577778777777777777654 345663 33444
No 224
>PRK09186 flagellin modification protein A; Provisional
Probab=98.25 E-value=1.1e-05 Score=72.01 Aligned_cols=169 Identities=17% Similarity=0.119 Sum_probs=89.9
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh----cc-CCccceEEeCCHHHH
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA----AF-PLLKGVVATTDVVEA 78 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~----~~-~~~~~v~~~~~~~~a 78 (332)
+.++|+||||+|+||++++..|++.|. ++++.+++. +.+.....++... .. ....|+....++.++
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-------~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~ 73 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-------IVIAADIDK--EALNELLESLGKEFKSKKLSLVELDITDQESLEEF 73 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEecCh--HHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHH
Confidence 457899999999999999999998875 788888753 2333222333110 01 112344444344443
Q ss_pred hC-------CCcEEEEecCCCCC------CCCChh---HHHhhhHHH----HHHHHHHHHhhcCCCcEEEEEeCChhhHH
Q 019990 79 CK-------DVNIAVMVGGFPRK------EGMERK---DVMSKNVSI----YKAQASALEKHAAPNCKVLVVANPANTNA 138 (332)
Q Consensus 79 ~~-------~aDiVi~~ag~~~~------~~~~~~---~~~~~N~~~----~~~i~~~i~~~~~~~~~viv~snp~~~~~ 138 (332)
++ ..|+|||.|+.... .+.+.. ..+..|+.. ++.+++.+++.+ ..+++++|+-.....
T Consensus 74 ~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~~~ 151 (256)
T PRK09186 74 LSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG--GGNLVNISSIYGVVA 151 (256)
T ss_pred HHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC--CceEEEEechhhhcc
Confidence 33 37999999964311 112211 234445533 345555555442 346666664221111
Q ss_pred HHHHHHCCCCCCC--cEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEec
Q 019990 139 LILKEFAPSIPAK--NITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGN 187 (332)
Q Consensus 139 ~~~~~~~~~~~~~--~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~ 187 (332)
+-.... .+.+.. ..|+.+|.....+...+++.+. +..++. +++.+
T Consensus 152 ~~~~~~-~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~--~~~i~v-~~i~P 198 (256)
T PRK09186 152 PKFEIY-EGTSMTSPVEYAAIKAGIIHLTKYLAKYFK--DSNIRV-NCVSP 198 (256)
T ss_pred ccchhc-cccccCCcchhHHHHHHHHHHHHHHHHHhC--cCCeEE-EEEec
Confidence 000000 111111 2477788777777777777653 445663 34454
No 225
>PRK05693 short chain dehydrogenase; Provisional
Probab=98.23 E-value=4e-06 Score=75.82 Aligned_cols=145 Identities=14% Similarity=0.127 Sum_probs=78.9
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc-CCccceEEeCCHHHH-----
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF-PLLKGVVATTDVVEA----- 78 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~a----- 78 (332)
|++++||||+|+||++++..|++.|. +|++.+++. +.+. ++..... ....|+....++.+.
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~-------~V~~~~r~~--~~~~----~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 67 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGY-------EVWATARKA--EDVE----ALAAAGFTAVQLDVNDGAALARLAEELE 67 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHH----HHHHCCCeEEEeeCCCHHHHHHHHHHHH
Confidence 35799999999999999999998875 888888753 1221 1111111 111233322222222
Q ss_pred --hCCCcEEEEecCCCCC-C--CCCh---hHHHhhhHHHHHHHHHHHHhhcC-CCcEEEEEeCChhhHHHHHHHHCCCCC
Q 019990 79 --CKDVNIAVMVGGFPRK-E--GMER---KDVMSKNVSIYKAQASALEKHAA-PNCKVLVVANPANTNALILKEFAPSIP 149 (332)
Q Consensus 79 --~~~aDiVi~~ag~~~~-~--~~~~---~~~~~~N~~~~~~i~~~i~~~~~-~~~~viv~snp~~~~~~~~~~~~~~~~ 149 (332)
..+.|+|||.||.... + ..+. ...++.|+.....+.+.+..+.. ....++++++.... .+.+
T Consensus 68 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~---------~~~~ 138 (274)
T PRK05693 68 AEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGV---------LVTP 138 (274)
T ss_pred HhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCcccc---------CCCC
Confidence 2468999999986321 1 1122 23456677666555555433210 12456666653221 1122
Q ss_pred CCcEEEeecccHHHHHHHHHHH
Q 019990 150 AKNITCLTRLDHNRAMGQISER 171 (332)
Q Consensus 150 ~~~i~~~t~l~~~r~~~~~a~~ 171 (332)
....|+.++.....+...++..
T Consensus 139 ~~~~Y~~sK~al~~~~~~l~~e 160 (274)
T PRK05693 139 FAGAYCASKAAVHALSDALRLE 160 (274)
T ss_pred CccHHHHHHHHHHHHHHHHHHH
Confidence 2234566666666665556555
No 226
>PRK08177 short chain dehydrogenase; Provisional
Probab=98.23 E-value=1e-05 Score=70.87 Aligned_cols=158 Identities=10% Similarity=0.041 Sum_probs=85.9
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhC----
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACK---- 80 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~---- 80 (332)
|++|+||||+|++|++++..|++.|. +|.+++++.. .... ..++.... ....|+....+..+.++
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G~-------~V~~~~r~~~--~~~~-~~~~~~~~-~~~~D~~d~~~~~~~~~~~~~ 69 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGW-------QVTATVRGPQ--QDTA-LQALPGVH-IEKLDMNDPASLDQLLQRLQG 69 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCCC-------EEEEEeCCCc--chHH-HHhccccc-eEEcCCCCHHHHHHHHHHhhc
Confidence 35799999999999999999998875 8999998642 1111 11111110 11123433322322222
Q ss_pred -CCcEEEEecCCCCCC-----CCChh---HHHhhhHHHHHHHHHHHHhhcCCC-cEEEEEeCChhhHHHHHHHHCCCCCC
Q 019990 81 -DVNIAVMVGGFPRKE-----GMERK---DVMSKNVSIYKAQASALEKHAAPN-CKVLVVANPANTNALILKEFAPSIPA 150 (332)
Q Consensus 81 -~aDiVi~~ag~~~~~-----~~~~~---~~~~~N~~~~~~i~~~i~~~~~~~-~~viv~snp~~~~~~~~~~~~~~~~~ 150 (332)
..|+|||.||..... ..+.. ..+..|......+.+.+..+...+ ..+++.++..... .. .....
T Consensus 70 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~----~~--~~~~~ 143 (225)
T PRK08177 70 QRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSV----EL--PDGGE 143 (225)
T ss_pred CCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCcccc----cc--CCCCC
Confidence 589999999874211 11222 233456555555555554432112 3444444322110 00 11112
Q ss_pred CcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 151 KNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 151 ~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
...|+.++.....+.+.+++.++ +..++.
T Consensus 144 ~~~Y~~sK~a~~~~~~~l~~e~~--~~~i~v 172 (225)
T PRK08177 144 MPLYKASKAALNSMTRSFVAELG--EPTLTV 172 (225)
T ss_pred ccchHHHHHHHHHHHHHHHHHhh--cCCeEE
Confidence 23578888888888888888765 345653
No 227
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.22 E-value=1.1e-05 Score=71.74 Aligned_cols=158 Identities=13% Similarity=0.060 Sum_probs=87.4
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEE-ecccchhhhhhhHhhhhhhcc---CCccceEEeCCHHHHh
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHML-DIEPAAEALNGVKMELIDAAF---PLLKGVVATTDVVEAC 79 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~-D~~~~~~~~~~~~~dl~~~~~---~~~~~v~~~~~~~~a~ 79 (332)
..++++||||+|+||++++..|++.|. ++++. +++. +.......++..... .+..|++...++.+++
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-------~v~~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 73 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-------DIAVNYARSR--KAAEETAEEIEALGRKALAVKANVGDVEKIKEMF 73 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEcCCCH--HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence 346899999999999999999999875 66553 4332 222222222221110 1123444333333333
Q ss_pred C-------CCcEEEEecCCCCC-C--CCChhH---HHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHHH
Q 019990 80 K-------DVNIAVMVGGFPRK-E--GMERKD---VMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKEF 144 (332)
Q Consensus 80 ~-------~aDiVi~~ag~~~~-~--~~~~~~---~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~~ 144 (332)
+ ..|+|||.||.... + ..+..+ .+..|......+++++..+. .+..+++++|+....
T Consensus 74 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-------- 145 (250)
T PRK08063 74 AQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSI-------- 145 (250)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhc--------
Confidence 3 57999999986321 1 112221 34567666666666665432 123466666652110
Q ss_pred CCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 145 APSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 145 ~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.++...|+.+|.....+...+++.+. +..++.
T Consensus 146 -~~~~~~~~y~~sK~a~~~~~~~~~~~~~--~~~i~v 179 (250)
T PRK08063 146 -RYLENYTTVGVSKAALEALTRYLAVELA--PKGIAV 179 (250)
T ss_pred -cCCCCccHHHHHHHHHHHHHHHHHHHHh--HhCeEE
Confidence 1233334677888888888777776642 344553
No 228
>PLN02503 fatty acyl-CoA reductase 2
Probab=98.22 E-value=8.3e-06 Score=81.34 Aligned_cols=122 Identities=20% Similarity=0.148 Sum_probs=71.3
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhh-hhhHhhhhh-----------h----------
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEAL-NGVKMELID-----------A---------- 61 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~-~~~~~dl~~-----------~---------- 61 (332)
+.++|+||||+||+|++|+..|++.+. +..+|+++.+....+.. +....++.+ .
T Consensus 118 ~~k~VlVTGaTGFLGk~LlekLLr~~~----~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~K 193 (605)
T PLN02503 118 RGKNFLITGATGFLAKVLIEKILRTNP----DVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSK 193 (605)
T ss_pred cCCEEEEcCCchHHHHHHHHHHHHhCC----CCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCcccccccccc
Confidence 457899999999999999999987432 01267777654321111 111011110 0
Q ss_pred ccCCccceEEeC------CHHHHhCCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEe
Q 019990 62 AFPLLKGVVATT------DVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVA 131 (332)
Q Consensus 62 ~~~~~~~v~~~~------~~~~a~~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~s 131 (332)
..+..+|+.... +.....+++|+|||+|+.... ..+.....+.|+.++.++++.+.+..... +++.+|
T Consensus 194 i~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f-~~~~~~a~~vNV~GT~nLLelA~~~~~lk-~fV~vS 267 (605)
T PLN02503 194 LVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTF-DERYDVAIDINTRGPCHLMSFAKKCKKLK-LFLQVS 267 (605)
T ss_pred EEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECcccccc-ccCHHHHHHHHHHHHHHHHHHHHHcCCCC-eEEEcc
Confidence 001123443321 222334679999999986532 23455677889999999999998763112 344444
No 229
>PRK07074 short chain dehydrogenase; Provisional
Probab=98.21 E-value=1e-05 Score=72.28 Aligned_cols=149 Identities=20% Similarity=0.174 Sum_probs=83.2
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc-CCccceEEeCCHHHHhC----
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF-PLLKGVVATTDVVEACK---- 80 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~a~~---- 80 (332)
++++||||+|+||.+++..|++.|. ++.+++++.. .+.....++..... ....|+....++.+++.
T Consensus 3 k~ilItGat~~iG~~la~~L~~~g~-------~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 73 (257)
T PRK07074 3 RTALVTGAAGGIGQALARRFLAAGD-------RVLALDIDAA--ALAAFADALGDARFVPVACDLTDAASLAAALANAAA 73 (257)
T ss_pred CEEEEECCcchHHHHHHHHHHHCCC-------EEEEEeCCHH--HHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 4799999999999999999998775 7899987532 22222222211111 11223333333333332
Q ss_pred ---CCcEEEEecCCCCCCC---CChhH---HHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHHHCCCCC
Q 019990 81 ---DVNIAVMVGGFPRKEG---MERKD---VMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKEFAPSIP 149 (332)
Q Consensus 81 ---~aDiVi~~ag~~~~~~---~~~~~---~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~~~~~~~ 149 (332)
+.|+|||++|...... .+..+ .+..|......+++.+.... .....++++|+.... ..+
T Consensus 74 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~---------~~~- 143 (257)
T PRK07074 74 ERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGM---------AAL- 143 (257)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhc---------CCC-
Confidence 5799999998643211 12222 23456665555555553221 123456666652111 011
Q ss_pred CCcEEEeecccHHHHHHHHHHHcC
Q 019990 150 AKNITCLTRLDHNRAMGQISERLK 173 (332)
Q Consensus 150 ~~~i~~~t~l~~~r~~~~~a~~~~ 173 (332)
....|+.++....++...+++.++
T Consensus 144 ~~~~y~~sK~a~~~~~~~~a~~~~ 167 (257)
T PRK07074 144 GHPAYSAAKAGLIHYTKLLAVEYG 167 (257)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHh
Confidence 122567788888888888887765
No 230
>PRK05867 short chain dehydrogenase; Provisional
Probab=98.20 E-value=1.1e-05 Score=72.01 Aligned_cols=160 Identities=17% Similarity=0.177 Sum_probs=90.2
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc---cCCccceEEeCCHHHH-
Q 019990 3 KNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA---FPLLKGVVATTDVVEA- 78 (332)
Q Consensus 3 ~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~---~~~~~~v~~~~~~~~a- 78 (332)
.+.++++||||+|.||.+++..|++.|. +|++.+++. +.++....++.+.. .....|+....++.++
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~ 77 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAGA-------QVAIAARHL--DALEKLADEIGTSGGKVVPVCCDVSQHQQVTSML 77 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEcCCH--HHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence 3457899999999999999999999885 889988753 23333333332211 0112344333333332
Q ss_pred ------hCCCcEEEEecCCCCCC---CCChh---HHHhhhHHHHHHHHHHHHhhc---CCCcEEEEEeCChhhHHHHHHH
Q 019990 79 ------CKDVNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKAQASALEKHA---APNCKVLVVANPANTNALILKE 143 (332)
Q Consensus 79 ------~~~aDiVi~~ag~~~~~---~~~~~---~~~~~N~~~~~~i~~~i~~~~---~~~~~viv~snp~~~~~~~~~~ 143 (332)
+...|++||.||..... ..+.+ ..+..|+.....+.+.+..+- .....++++++-.. .
T Consensus 78 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~-------~ 150 (253)
T PRK05867 78 DQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSG-------H 150 (253)
T ss_pred HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHh-------c
Confidence 23689999999864311 12222 245667766555555543321 12245555553211 0
Q ss_pred HCCCCCCC-cEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 144 FAPSIPAK-NITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 144 ~~~~~~~~-~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
. ...+.. ..|+.+|.....+.+.+++.+. +..|+.
T Consensus 151 ~-~~~~~~~~~Y~asKaal~~~~~~la~e~~--~~gI~v 186 (253)
T PRK05867 151 I-INVPQQVSHYCASKAAVIHLTKAMAVELA--PHKIRV 186 (253)
T ss_pred C-CCCCCCccchHHHHHHHHHHHHHHHHHHh--HhCeEE
Confidence 0 111222 3577788877888888887764 345653
No 231
>PRK09242 tropinone reductase; Provisional
Probab=98.20 E-value=7.4e-06 Score=73.21 Aligned_cols=158 Identities=12% Similarity=0.103 Sum_probs=89.3
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh----cc-CCccceEEeCCHH--
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA----AF-PLLKGVVATTDVV-- 76 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~----~~-~~~~~v~~~~~~~-- 76 (332)
..++++||||+|.||++++..|.+.|. +|.+++++. +.+.....++... .. ....|+....++.
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-------~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~ 78 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-------DVLIVARDA--DALAQARDELAEEFPEREVHGLAADVSDDEDRRAI 78 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHH
Confidence 457899999999999999999998875 899998753 2333333333221 00 1112343322222
Q ss_pred -----HHhCCCcEEEEecCCCCC-C--CCChh---HHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHH
Q 019990 77 -----EACKDVNIAVMVGGFPRK-E--GMERK---DVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKE 143 (332)
Q Consensus 77 -----~a~~~aDiVi~~ag~~~~-~--~~~~~---~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~ 143 (332)
+.+...|+||+.+|.... + ..+.+ ..+..|......+.+++..+- .+...++++|+....
T Consensus 79 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~------- 151 (257)
T PRK09242 79 LDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGL------- 151 (257)
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccC-------
Confidence 223467999999986321 1 11222 245667766656655543221 123466666653211
Q ss_pred HCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 144 FAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 144 ~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.++.....+...++..+. +..++.
T Consensus 152 --~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~~i~v 185 (257)
T PRK09242 152 --THVRSGAPYGMTKAALLQMTRNLAVEWA--EDGIRV 185 (257)
T ss_pred --CCCCCCcchHHHHHHHHHHHHHHHHHHH--HhCeEE
Confidence 1223333577788777777777776653 344553
No 232
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=98.20 E-value=1.7e-05 Score=71.11 Aligned_cols=155 Identities=13% Similarity=0.110 Sum_probs=86.3
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc-c-CCccceEEeCCHHHHh----
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA-F-PLLKGVVATTDVVEAC---- 79 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~-~-~~~~~v~~~~~~~~a~---- 79 (332)
|+|+||||+|.||++++..|++.|. +|.+.+++. +.+.....++.+.. . ....|++...++.+.+
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~ 71 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGA-------RVVISSRNE--ENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAW 71 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHH
Confidence 4799999999999999999999885 788988753 23333333332211 1 1123444333333322
Q ss_pred ---CCCcEEEEecCCCCC-----CCCChhHH---HhhhHHH----HHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHH
Q 019990 80 ---KDVNIAVMVGGFPRK-----EGMERKDV---MSKNVSI----YKAQASALEKHAAPNCKVLVVANPANTNALILKEF 144 (332)
Q Consensus 80 ---~~aDiVi~~ag~~~~-----~~~~~~~~---~~~N~~~----~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~ 144 (332)
...|++|+.||.... ...+..++ +..|... .+.++..+.+.. ..+++|++|+....
T Consensus 72 ~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~~g~iv~isS~~~~-------- 142 (259)
T PRK08340 72 ELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKK-MKGVLVYLSSVSVK-------- 142 (259)
T ss_pred HhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcC-CCCEEEEEeCcccC--------
Confidence 368999999986321 11222222 2334322 233444443222 23566776653211
Q ss_pred CCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 145 APSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 145 ~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.+|-....+.+.+++.++ +..|+.
T Consensus 143 -~~~~~~~~y~~sKaa~~~~~~~la~e~~--~~gI~v 176 (259)
T PRK08340 143 -EPMPPLVLADVTRAGLVQLAKGVSRTYG--GKGIRA 176 (259)
T ss_pred -CCCCCchHHHHHHHHHHHHHHHHHHHhC--CCCEEE
Confidence 1233333566677777777788888765 456664
No 233
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.19 E-value=1.6e-05 Score=73.31 Aligned_cols=164 Identities=15% Similarity=0.043 Sum_probs=92.0
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHHh-
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEAC- 79 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a~- 79 (332)
+.++++||||+|+||.+++..|++.|. ++++.|.... +.+.....++.... . ....|+....+..+.+
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-------~Vv~~~~~~~-~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~ 82 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-------TVVVNDVASA-LDASDVLDEIRAAGAKAVAVAGDISQRATADELVA 82 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEecCCch-hHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence 457899999999999999999999875 7888887432 12222222332211 0 1123443333333222
Q ss_pred -----CCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHHHhhc---------CCCcEEEEEeCChhhHHH
Q 019990 80 -----KDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEKHA---------APNCKVLVVANPANTNAL 139 (332)
Q Consensus 80 -----~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i~~~~---------~~~~~viv~snp~~~~~~ 139 (332)
...|++||.||..... ..+. ...+..|+.....+.+++..+- ...++++++++....
T Consensus 83 ~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~--- 159 (306)
T PRK07792 83 TAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGL--- 159 (306)
T ss_pred HHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccc---
Confidence 3589999999975431 1222 2345677766666665543211 012466666643211
Q ss_pred HHHHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEec
Q 019990 140 ILKEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGN 187 (332)
Q Consensus 140 ~~~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~ 187 (332)
.+.+....|+.+|.....+...+++.+. +..|+. +++.+
T Consensus 160 ------~~~~~~~~Y~asKaal~~l~~~la~e~~--~~gI~v-n~i~P 198 (306)
T PRK07792 160 ------VGPVGQANYGAAKAGITALTLSAARALG--RYGVRA-NAICP 198 (306)
T ss_pred ------cCCCCCchHHHHHHHHHHHHHHHHHHhh--hcCeEE-EEECC
Confidence 1112222467788777777777777643 355663 44554
No 234
>PRK06139 short chain dehydrogenase; Provisional
Probab=98.19 E-value=2.5e-05 Score=72.78 Aligned_cols=150 Identities=17% Similarity=0.140 Sum_probs=86.3
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc---CCccceEEeCCHHHHh-
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF---PLLKGVVATTDVVEAC- 79 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~---~~~~~v~~~~~~~~a~- 79 (332)
..++|+||||+|.||.+++..|++.|. +|++++++. +.++....++..... ....|++...++.+++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-------~Vvl~~R~~--~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~ 76 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-------RLVLAARDE--EALQAVAEECRALGAEVLVVPTDVTDADQVKALAT 76 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHH
Confidence 457899999999999999999999885 899998753 334433333322111 1123444333333332
Q ss_pred ------CCCcEEEEecCCCCCC---CCChh---HHHhhhHHHHHHHHH----HHHhhcCCCcEEEEEeCChhhHHHHHHH
Q 019990 80 ------KDVNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKAQAS----ALEKHAAPNCKVLVVANPANTNALILKE 143 (332)
Q Consensus 80 ------~~aDiVi~~ag~~~~~---~~~~~---~~~~~N~~~~~~i~~----~i~~~~~~~~~viv~snp~~~~~~~~~~ 143 (332)
...|++|+.||..... ..+.+ ..++.|......+.. .+.+.. .+.+|++++....
T Consensus 77 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~--~g~iV~isS~~~~------- 147 (330)
T PRK06139 77 QAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG--HGIFINMISLGGF------- 147 (330)
T ss_pred HHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC--CCEEEEEcChhhc-------
Confidence 4679999999864221 11222 346667655544433 344432 3466666642211
Q ss_pred HCCCCCCCcEEEeecccHHHHHHHHHHHcC
Q 019990 144 FAPSIPAKNITCLTRLDHNRAMGQISERLK 173 (332)
Q Consensus 144 ~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~ 173 (332)
.+.|....|+.+|.....+...++..+.
T Consensus 148 --~~~p~~~~Y~asKaal~~~~~sL~~El~ 175 (330)
T PRK06139 148 --AAQPYAAAYSASKFGLRGFSEALRGELA 175 (330)
T ss_pred --CCCCCchhHHHHHHHHHHHHHHHHHHhC
Confidence 1223333567777776667777776654
No 235
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=98.19 E-value=9.6e-06 Score=77.38 Aligned_cols=106 Identities=17% Similarity=0.084 Sum_probs=65.0
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc-CCccceEEeCCHHHHhCC
Q 019990 3 KNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF-PLLKGVVATTDVVEACKD 81 (332)
Q Consensus 3 ~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~a~~~ 81 (332)
.++++|+||||+|+||++++..|.+.|. ++.+++++. +.+.....+. .... ....|+....++.+.+.+
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G~-------~Vi~l~r~~--~~l~~~~~~~-~~~v~~v~~Dvsd~~~v~~~l~~ 245 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQGA-------KVVALTSNS--DKITLEINGE-DLPVKTLHWQVGQEAALAELLEK 245 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHhhc-CCCeEEEEeeCCCHHHHHHHhCC
Confidence 3467899999999999999999998875 788888753 2221111000 0000 011233333345556788
Q ss_pred CcEEEEecCCCCCCCCCh---hHHHhhhHHHHHHHHHHHH
Q 019990 82 VNIAVMVGGFPRKEGMER---KDVMSKNVSIYKAQASALE 118 (332)
Q Consensus 82 aDiVi~~ag~~~~~~~~~---~~~~~~N~~~~~~i~~~i~ 118 (332)
.|++|+.||.......+. .+.++.|......+.+++.
T Consensus 246 IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~l 285 (406)
T PRK07424 246 VDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFF 285 (406)
T ss_pred CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998743322332 2456778776666665543
No 236
>PRK06057 short chain dehydrogenase; Provisional
Probab=98.19 E-value=1.7e-05 Score=70.82 Aligned_cols=147 Identities=14% Similarity=0.081 Sum_probs=77.2
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHh----
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEAC---- 79 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~---- 79 (332)
+.++|+||||+|+||.+++..|++.|. +++++|++.. .+.....++.. .....|+....++.+.+
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-------~v~~~~r~~~--~~~~~~~~~~~--~~~~~D~~~~~~~~~~~~~~~ 74 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-------TVVVGDIDPE--AGKAAADEVGG--LFVPTDVTDEDAVNALFDTAA 74 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-------EEEEEeCCHH--HHHHHHHHcCC--cEEEeeCCCHHHHHHHHHHHH
Confidence 357899999999999999999998875 8899987532 22211122211 01112333322333333
Q ss_pred ---CCCcEEEEecCCCCC---C--CCCh---hHHHhhhHHHHHH----HHHHHHhhcCCCcEEEEEeCChhhHHHHHHHH
Q 019990 80 ---KDVNIAVMVGGFPRK---E--GMER---KDVMSKNVSIYKA----QASALEKHAAPNCKVLVVANPANTNALILKEF 144 (332)
Q Consensus 80 ---~~aDiVi~~ag~~~~---~--~~~~---~~~~~~N~~~~~~----i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~ 144 (332)
...|+|||+||.... + ..+. ...++.|....-. +.+.+.+.. ...++++|+....
T Consensus 75 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~g~iv~~sS~~~~-------- 144 (255)
T PRK06057 75 ETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG--KGSIINTASFVAV-------- 144 (255)
T ss_pred HHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC--CcEEEEEcchhhc--------
Confidence 357999999986321 1 1111 2345566554433 334444332 3466666653211
Q ss_pred CCCCCCC-cEEEeecccHHHHHHHHHHHc
Q 019990 145 APSIPAK-NITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 145 ~~~~~~~-~i~~~t~l~~~r~~~~~a~~~ 172 (332)
.+.++. ..|+.++.....+...++..+
T Consensus 145 -~g~~~~~~~Y~~sKaal~~~~~~l~~~~ 172 (255)
T PRK06057 145 -MGSATSQISYTASKGGVLAMSRELGVQF 172 (255)
T ss_pred -cCCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 111112 246666655545555555444
No 237
>PRK08703 short chain dehydrogenase; Provisional
Probab=98.18 E-value=4.1e-05 Score=67.63 Aligned_cols=158 Identities=13% Similarity=0.097 Sum_probs=87.3
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc---c-CCccceEEe--CCHHH-
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA---F-PLLKGVVAT--TDVVE- 77 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~---~-~~~~~v~~~--~~~~~- 77 (332)
.++|+||||+|++|.+++..|++.|. +|++++++. +.+.....++.... . ....|+... .+..+
T Consensus 6 ~k~vlItG~sggiG~~la~~l~~~g~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~ 76 (239)
T PRK08703 6 DKTILVTGASQGLGEQVAKAYAAAGA-------TVILVARHQ--KKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQF 76 (239)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCC-------EEEEEeCCh--HHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHH
Confidence 47899999999999999999998875 799999864 23332222221110 0 011233211 11111
Q ss_pred ------Hh-CCCcEEEEecCCCC--CC--CCChh---HHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHH
Q 019990 78 ------AC-KDVNIAVMVGGFPR--KE--GMERK---DVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALIL 141 (332)
Q Consensus 78 ------a~-~~aDiVi~~ag~~~--~~--~~~~~---~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~ 141 (332)
.+ ...|+|||+||... .+ ..+.. ..+..|+.....+.+.+.+.- .....++++++....
T Consensus 77 ~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~----- 151 (239)
T PRK08703 77 AATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGE----- 151 (239)
T ss_pred HHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccc-----
Confidence 12 45799999998632 11 12222 235667765544544443321 123466666542211
Q ss_pred HHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 142 KEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 142 ~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.+|.....+.+.++..++-. ..++.
T Consensus 152 ----~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~-~~i~v 186 (239)
T PRK08703 152 ----TPKAYWGGFGASKAALNYLCKVAADEWERF-GNLRA 186 (239)
T ss_pred ----cCCCCccchHHhHHHHHHHHHHHHHHhccC-CCeEE
Confidence 112222357888888888888888876533 23553
No 238
>PRK06949 short chain dehydrogenase; Provisional
Probab=98.18 E-value=7.5e-06 Score=73.06 Aligned_cols=157 Identities=16% Similarity=0.191 Sum_probs=85.5
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHHh--
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEAC-- 79 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a~-- 79 (332)
.++|+||||+|+||++++..|++.+. +|++++++. +.++....++.... . ....|+....++.+.+
T Consensus 9 ~k~ilItGasg~IG~~~a~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~ 79 (258)
T PRK06949 9 GKVALVTGASSGLGARFAQVLAQAGA-------KVVLASRRV--ERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAH 79 (258)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence 57899999999999999999998875 788888753 23332222221110 0 1112333222333333
Q ss_pred -----CCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHHHh----hcC------CCcEEEEEeCChhhHH
Q 019990 80 -----KDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEK----HAA------PNCKVLVVANPANTNA 138 (332)
Q Consensus 80 -----~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i~~----~~~------~~~~viv~snp~~~~~ 138 (332)
...|++|+.+|..... ..+. ...+..|......+.+.+.. ... +..+++++++....
T Consensus 80 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-- 157 (258)
T PRK06949 80 AETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGL-- 157 (258)
T ss_pred HHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECccccc--
Confidence 3589999999863221 1111 22455666555555544432 210 12456666542110
Q ss_pred HHHHHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 139 LILKEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 139 ~~~~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.++.....+...+++.++ +..++.
T Consensus 158 -------~~~~~~~~Y~~sK~a~~~~~~~la~~~~--~~~i~v 191 (258)
T PRK06949 158 -------RVLPQIGLYCMSKAAVVHMTRAMALEWG--RHGINV 191 (258)
T ss_pred -------CCCCCccHHHHHHHHHHHHHHHHHHHHH--hcCeEE
Confidence 1123333466677777777777777653 234553
No 239
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.17 E-value=9.7e-06 Score=71.94 Aligned_cols=152 Identities=14% Similarity=0.131 Sum_probs=81.5
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHH
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVE 77 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~ 77 (332)
|..+.++++||||+|+||++++..|++.|. +++++|++.. .+.....++.... . ....|+....+..+
T Consensus 1 ~~~~~~~~lItG~~g~iG~~~a~~l~~~G~-------~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 71 (253)
T PRK08217 1 MDLKDKVIVITGGAQGLGRAMAEYLAQKGA-------KLALIDLNQE--KLEEAVAECGALGTEVRGYAANVTDEEDVEA 71 (253)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCHH--HHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence 555667899999999999999999998875 7888887542 2222222222110 0 11123332222222
Q ss_pred Hh-------CCCcEEEEecCCCCC------------CCCChh---HHHhhhHHHHHHHHH----HHHhhcCCCcEEEEEe
Q 019990 78 AC-------KDVNIAVMVGGFPRK------------EGMERK---DVMSKNVSIYKAQAS----ALEKHAAPNCKVLVVA 131 (332)
Q Consensus 78 a~-------~~aDiVi~~ag~~~~------------~~~~~~---~~~~~N~~~~~~i~~----~i~~~~~~~~~viv~s 131 (332)
.+ ...|+|||.+|.... ...+.. ..+..|+.....+.+ .+.+.. ....++++|
T Consensus 72 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~-~~~~iv~~s 150 (253)
T PRK08217 72 TFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESG-SKGVIINIS 150 (253)
T ss_pred HHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCeEEEEEc
Confidence 22 347999999986321 111111 234556655543333 333322 234555555
Q ss_pred CChhhHHHHHHHHCCCCCCCcEEEeecccHHHHHHHHHHHc
Q 019990 132 NPANTNALILKEFAPSIPAKNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 132 np~~~~~~~~~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
. ... .+.+....|+.++.....+...+++.+
T Consensus 151 s-~~~---------~~~~~~~~Y~~sK~a~~~l~~~la~~~ 181 (253)
T PRK08217 151 S-IAR---------AGNMGQTNYSASKAGVAAMTVTWAKEL 181 (253)
T ss_pred c-ccc---------cCCCCCchhHHHHHHHHHHHHHHHHHH
Confidence 3 211 122333356777776667766677664
No 240
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=98.17 E-value=1.2e-05 Score=70.65 Aligned_cols=149 Identities=17% Similarity=0.147 Sum_probs=86.1
Q ss_pred EEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHHh-----
Q 019990 8 VLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEAC----- 79 (332)
Q Consensus 8 I~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a~----- 79 (332)
|+||||+|++|++++..|++.|. ++.+++++.. +.+.....++.+.. . ....|++...++.+.+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~-------~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 72 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGA-------KVIITYRSSE-EGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEE 72 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCch-hHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 57999999999999999998886 7888887531 12222222332211 0 1123443333333333
Q ss_pred --CCCcEEEEecCCCCCC---CCC---hhHHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHHHCCCCC
Q 019990 80 --KDVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKEFAPSIP 149 (332)
Q Consensus 80 --~~aDiVi~~ag~~~~~---~~~---~~~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~~~~~~~ 149 (332)
...|+|||.+|..... +.+ ....+..|......+.+.+.++. ....+++++|+.... .+.+
T Consensus 73 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~---------~g~~ 143 (239)
T TIGR01830 73 ELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGL---------MGNA 143 (239)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCcccc---------CCCC
Confidence 3469999999864211 111 13356778887777777776542 123366666653321 1223
Q ss_pred CCcEEEeecccHHHHHHHHHHHcC
Q 019990 150 AKNITCLTRLDHNRAMGQISERLK 173 (332)
Q Consensus 150 ~~~i~~~t~l~~~r~~~~~a~~~~ 173 (332)
....|+.++.....+...+++.++
T Consensus 144 ~~~~y~~~k~a~~~~~~~l~~~~~ 167 (239)
T TIGR01830 144 GQANYAASKAGVIGFTKSLAKELA 167 (239)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHh
Confidence 333567777766667777777654
No 241
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=98.17 E-value=1.2e-05 Score=69.09 Aligned_cols=278 Identities=16% Similarity=0.166 Sum_probs=147.7
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHh--CCC
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEAC--KDV 82 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~--~~a 82 (332)
++||+|+|++|-||+++..-+..++.-+ ...++....+ .||.. ..+.++-+ ..-
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~----e~wvf~~skd---------~DLt~-----------~a~t~~lF~~ekP 56 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDD----ENWVFIGSKD---------ADLTN-----------LADTRALFESEKP 56 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCC----cceEEecccc---------ccccc-----------hHHHHHHHhccCC
Confidence 4799999999999999999998877521 2466655321 12211 12222222 234
Q ss_pred cEEEEecCC----CCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEe--------CChhhHHHHHHHHCCCCCC
Q 019990 83 NIAVMVGGF----PRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVA--------NPANTNALILKEFAPSIPA 150 (332)
Q Consensus 83 DiVi~~ag~----~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~s--------np~~~~~~~~~~~~~~~~~ 150 (332)
-.|||+|+. -+.... ..|++..|+.+-.+++..+-.++-.++..+..| -|++-.. -.. ....|
T Consensus 57 thVIhlAAmVGGlf~N~~y-nldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtm---vh~-gpphp 131 (315)
T KOG1431|consen 57 THVIHLAAMVGGLFHNNTY-NLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETM---VHN-GPPHP 131 (315)
T ss_pred ceeeehHhhhcchhhcCCC-chHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHH---hcc-CCCCC
Confidence 578887743 222222 367889999888888888877762222222211 2333211 111 11233
Q ss_pred CcE-EEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecCC------CceeecccC-c---cc------ccCCCCcchhhh
Q 019990 151 KNI-TCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHS------STQYPDVNH-A---TV------TTSKGEKPVREA 213 (332)
Q Consensus 151 ~~i-~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg------~~~v~~~s~-~---~v------~~~~~~~p~~~~ 213 (332)
.++ |+.++-...-..+.+..++|-+..++-+.+|||+|. ...+|.+-+ . +. ..-+.|-|+.++
T Consensus 132 sN~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqF 211 (315)
T KOG1431|consen 132 SNFGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQF 211 (315)
T ss_pred CchHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHH
Confidence 343 455552222234778889999999998899999985 244553321 1 11 122347899998
Q ss_pred ccccccchhHHHHHH-Hhh-HHH-HHHhcCCcchHHHHHHHHHHHHHHHcCCCCCcEEEEEEeecCCCCCCCCeEEEEeE
Q 019990 214 VADDNWLNTEFITTV-QQR-GAA-IIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDGSYGIPEGLIYSFPV 290 (332)
Q Consensus 214 ~~~~~~~~~~~~~~v-~~~-~~~-i~~~~g~~~~~~~a~a~~~~i~~~~~~~~~~~i~~~~v~~~g~yg~~~~~~~s~Pv 290 (332)
+... +..++.-.+ ++. +.| |+-.-|.+.--++ .-+++.+..++-. +|++.--...++|+|-= -.|.
T Consensus 212 iys~--DLA~l~i~vlr~Y~~vEpiils~ge~~EVtI-~e~aeaV~ea~~F--~G~l~~DttK~DGq~kK----tasn-- 280 (315)
T KOG1431|consen 212 IYSD--DLADLFIWVLREYEGVEPIILSVGESDEVTI-REAAEAVVEAVDF--TGKLVWDTTKSDGQFKK----TASN-- 280 (315)
T ss_pred hhHh--HHHHHHHHHHHhhcCccceEeccCccceeEH-HHHHHHHHHHhCC--CceEEeeccCCCCCccc----ccch--
Confidence 8754 223333322 221 111 1222222111111 3344555555553 36665555667777521 1110
Q ss_pred EEeCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 019990 291 TCEKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTL 326 (332)
Q Consensus 291 ~~~~G~~~~~~~~~l~~~E~~~l~~s~~~i~~~~~~ 326 (332)
.......+++.+++.|++ +.++.+..-++++.
T Consensus 281 ---sKL~sl~pd~~ft~l~~a-i~~t~~Wy~~Ny~q 312 (315)
T KOG1431|consen 281 ---SKLRSLLPDFKFTPLEQA-ISETVQWYLDNYEQ 312 (315)
T ss_pred ---HHHHHhCCCcccChHHHH-HHHHHHHHHHhHHh
Confidence 122334457788988764 56666665555544
No 242
>PRK06523 short chain dehydrogenase; Provisional
Probab=98.16 E-value=5.2e-06 Score=74.33 Aligned_cols=149 Identities=15% Similarity=0.123 Sum_probs=85.2
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCH-------HH
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDV-------VE 77 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~-------~~ 77 (332)
.++|+||||+|.||++++..|++.|. +|++++++... ... ........|+....+. .+
T Consensus 9 ~k~vlItGas~gIG~~ia~~l~~~G~-------~v~~~~r~~~~-~~~-------~~~~~~~~D~~~~~~~~~~~~~~~~ 73 (260)
T PRK06523 9 GKRALVTGGTKGIGAATVARLLEAGA-------RVVTTARSRPD-DLP-------EGVEFVAADLTTAEGCAAVARAVLE 73 (260)
T ss_pred CCEEEEECCCCchhHHHHHHHHHCCC-------EEEEEeCChhh-hcC-------CceeEEecCCCCHHHHHHHHHHHHH
Confidence 47899999999999999999998875 78888875321 110 0000111233322222 22
Q ss_pred HhCCCcEEEEecCCCCCC-----CCCh---hHHHhhhHHHHHHH----HHHHHhhcCCCcEEEEEeCChhhHHHHHHHHC
Q 019990 78 ACKDVNIAVMVGGFPRKE-----GMER---KDVMSKNVSIYKAQ----ASALEKHAAPNCKVLVVANPANTNALILKEFA 145 (332)
Q Consensus 78 a~~~aDiVi~~ag~~~~~-----~~~~---~~~~~~N~~~~~~i----~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~ 145 (332)
.+...|+|||.||..... ..+. ...+..|+.....+ ++.+++.. ..++|++|+....
T Consensus 74 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~ii~isS~~~~--------- 142 (260)
T PRK06523 74 RLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG--SGVIIHVTSIQRR--------- 142 (260)
T ss_pred HcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC--CcEEEEEeccccc---------
Confidence 345689999999853211 1122 22455676655444 44444432 3466777654221
Q ss_pred CCCC-CCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 146 PSIP-AKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 146 ~~~~-~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+ ....|+.+|.....+...+++.++ +..|+.
T Consensus 143 ~~~~~~~~~Y~~sK~a~~~l~~~~a~~~~--~~gi~v 177 (260)
T PRK06523 143 LPLPESTTAYAAAKAALSTYSKSLSKEVA--PKGVRV 177 (260)
T ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHh--hcCcEE
Confidence 1222 233577788777778777777654 345654
No 243
>PLN00016 RNA-binding protein; Provisional
Probab=98.16 E-value=5.2e-06 Score=78.86 Aligned_cols=152 Identities=14% Similarity=0.161 Sum_probs=83.5
Q ss_pred CCcEEEEE----cCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccch-hhhhh----hHhhhhhhccC-CccceEEeC
Q 019990 4 NPLRVLVT----GAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAA-EALNG----VKMELIDAAFP-LLKGVVATT 73 (332)
Q Consensus 4 ~~~kI~Vt----GaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~-~~~~~----~~~dl~~~~~~-~~~~v~~~~ 73 (332)
.++||+|| ||+||||++++..|++.|+ +|+++++.... ..+.. ...++...... ...|+ .
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~-------~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~---~ 120 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGH-------EVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDP---A 120 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCC-------EEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecH---H
Confidence 45789999 9999999999999999886 89988875421 00000 00011110000 01121 1
Q ss_pred CHHHHh--CCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCC--CCC
Q 019990 74 DVVEAC--KDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAP--SIP 149 (332)
Q Consensus 74 ~~~~a~--~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~--~~~ 149 (332)
++.+.+ .++|+|||+++. +...++.+++++++.+ .. ++|++|+. .+ |--....+ .-.
T Consensus 121 d~~~~~~~~~~d~Vi~~~~~--------------~~~~~~~ll~aa~~~g-vk-r~V~~SS~-~v--yg~~~~~p~~E~~ 181 (378)
T PLN00016 121 DVKSKVAGAGFDVVYDNNGK--------------DLDEVEPVADWAKSPG-LK-QFLFCSSA-GV--YKKSDEPPHVEGD 181 (378)
T ss_pred HHHhhhccCCccEEEeCCCC--------------CHHHHHHHHHHHHHcC-CC-EEEEEccH-hh--cCCCCCCCCCCCC
Confidence 233333 479999998642 1234567888888764 22 56666642 21 10000000 000
Q ss_pred CCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecCC
Q 019990 150 AKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHS 189 (332)
Q Consensus 150 ~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg 189 (332)
+..... ++...+++ .+..+++...+|+.++||+..
T Consensus 182 ~~~p~~-sK~~~E~~----l~~~~l~~~ilRp~~vyG~~~ 216 (378)
T PLN00016 182 AVKPKA-GHLEVEAY----LQKLGVNWTSFRPQYIYGPGN 216 (378)
T ss_pred cCCCcc-hHHHHHHH----HHHcCCCeEEEeceeEECCCC
Confidence 001111 45544443 345689999999999999854
No 244
>PRK06484 short chain dehydrogenase; Validated
Probab=98.16 E-value=1.5e-05 Score=78.78 Aligned_cols=157 Identities=18% Similarity=0.196 Sum_probs=94.2
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHh-----
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEAC----- 79 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~----- 79 (332)
.++++||||+|.||.+++..|++.|. +|++.+++. +.+......+.........|+....++.+.+
T Consensus 269 ~k~~lItGas~gIG~~~a~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 339 (520)
T PRK06484 269 PRVVAITGGARGIGRAVADRFAAAGD-------RLLIIDRDA--EGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQA 339 (520)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999885 789998753 2232222222110011123444333333322
Q ss_pred --CCCcEEEEecCCCC--CC--CCCh---hHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCC
Q 019990 80 --KDVNIAVMVGGFPR--KE--GMER---KDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPA 150 (332)
Q Consensus 80 --~~aDiVi~~ag~~~--~~--~~~~---~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~ 150 (332)
...|++||.||... .+ ..+. ...+..|+.....+.+.+..+-...+.+|++|+.... .+.+.
T Consensus 340 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~---------~~~~~ 410 (520)
T PRK06484 340 RWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASL---------LALPP 410 (520)
T ss_pred HcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhc---------CCCCC
Confidence 35799999998742 11 1222 2356778777766666655542234577777764321 12333
Q ss_pred CcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 151 KNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 151 ~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
...|+.+|.....+.+.+++.+. +..|+.
T Consensus 411 ~~~Y~asKaal~~l~~~la~e~~--~~gI~v 439 (520)
T PRK06484 411 RNAYCASKAAVTMLSRSLACEWA--PAGIRV 439 (520)
T ss_pred CchhHHHHHHHHHHHHHHHHHhh--hhCeEE
Confidence 44678888888888888887764 345664
No 245
>PRK08251 short chain dehydrogenase; Provisional
Probab=98.16 E-value=4.2e-05 Score=67.86 Aligned_cols=149 Identities=15% Similarity=0.175 Sum_probs=82.9
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh----cc-CCccceEEeCCHHH--
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA----AF-PLLKGVVATTDVVE-- 77 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~----~~-~~~~~v~~~~~~~~-- 77 (332)
+++++||||+|+||.+++..|++.+. ++.+.+++. +.+.....++... .. ....|++...++.+
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 72 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-------DLALCARRT--DRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVF 72 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHH
Confidence 35799999999999999999998874 788888754 2233222233211 00 11124433323222
Q ss_pred -----HhCCCcEEEEecCCCCCCC---CCh---hHHHhhhHHHHHHHHHHHH----hhcCCCcEEEEEeCChhhHHHHHH
Q 019990 78 -----ACKDVNIAVMVGGFPRKEG---MER---KDVMSKNVSIYKAQASALE----KHAAPNCKVLVVANPANTNALILK 142 (332)
Q Consensus 78 -----a~~~aDiVi~~ag~~~~~~---~~~---~~~~~~N~~~~~~i~~~i~----~~~~~~~~viv~snp~~~~~~~~~ 142 (332)
.+...|+||+.||...... .+. ...++.|......+.+.+. +.. ..+++++|+-...
T Consensus 73 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~------ 144 (248)
T PRK08251 73 AEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG--SGHLVLISSVSAV------ 144 (248)
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CCeEEEEeccccc------
Confidence 2346899999998743211 111 2345667766655555543 332 3356666642211
Q ss_pred HHCCCCCC-CcEEEeecccHHHHHHHHHHHcC
Q 019990 143 EFAPSIPA-KNITCLTRLDHNRAMGQISERLK 173 (332)
Q Consensus 143 ~~~~~~~~-~~i~~~t~l~~~r~~~~~a~~~~ 173 (332)
.+.+. ...|+.++.....+...++..+.
T Consensus 145 ---~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~ 173 (248)
T PRK08251 145 ---RGLPGVKAAYAASKAGVASLGEGLRAELA 173 (248)
T ss_pred ---cCCCCCcccHHHHHHHHHHHHHHHHHHhc
Confidence 12222 23567777666666666666554
No 246
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=98.15 E-value=3.4e-05 Score=68.36 Aligned_cols=157 Identities=11% Similarity=0.051 Sum_probs=82.2
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccC---CccceEEeCCHHHH---
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFP---LLKGVVATTDVVEA--- 78 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~a--- 78 (332)
.+.++||||+|+||++++..|++.|. ++++...... ........++...... ...|+....++.++
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~~G~-------~vv~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 74 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHKDGF-------KVVAGCGPNS-PRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDK 74 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCC-------EEEEEcCCCh-HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence 45789999999999999999999875 6666432211 1111122222211110 11344333333333
Q ss_pred ----hCCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHHHCC
Q 019990 79 ----CKDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKEFAP 146 (332)
Q Consensus 79 ----~~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~~~~ 146 (332)
+...|+|||+||..... ..+. ...+..|......+.+.+.... ....+++++|+.... .
T Consensus 75 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~---------~ 145 (246)
T PRK12938 75 VKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQ---------K 145 (246)
T ss_pred HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhcc---------C
Confidence 24689999999874321 1122 2345677766444444333221 123466776653211 1
Q ss_pred CCCCCcEEEeecccHHHHHHHHHHHcCCCCCCee
Q 019990 147 SIPAKNITCLTRLDHNRAMGQISERLKVHVSDVK 180 (332)
Q Consensus 147 ~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~ 180 (332)
+.+....|+.++.....+...+++.++ +..++
T Consensus 146 ~~~~~~~y~~sK~a~~~~~~~l~~~~~--~~gi~ 177 (246)
T PRK12938 146 GQFGQTNYSTAKAGIHGFTMSLAQEVA--TKGVT 177 (246)
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHHhh--hhCeE
Confidence 122223456677666667777777654 34454
No 247
>PRK06198 short chain dehydrogenase; Provisional
Probab=98.15 E-value=2e-05 Score=70.44 Aligned_cols=152 Identities=13% Similarity=0.067 Sum_probs=83.9
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeE-EEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHHh
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVI-LHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEAC 79 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~-i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a~ 79 (332)
+.++|+||||+|+||++++..|.+.+. + |.+++++. +.......++.... . ....|+....++.+.+
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~-------~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~ 75 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGA-------AGLVICGRNA--EKGEAQAAELEALGAKAVFVQADLSDVEDCRRVV 75 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-------CeEEEEcCCH--HHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence 457899999999999999999998875 5 88898753 22222222221111 0 0112333322232322
Q ss_pred -------CCCcEEEEecCCCCCC---CCChh---HHHhhhHHHHHHHHHHHHhhc---CCCcEEEEEeCChhhHHHHHHH
Q 019990 80 -------KDVNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKAQASALEKHA---APNCKVLVVANPANTNALILKE 143 (332)
Q Consensus 80 -------~~aDiVi~~ag~~~~~---~~~~~---~~~~~N~~~~~~i~~~i~~~~---~~~~~viv~snp~~~~~~~~~~ 143 (332)
.+.|++||++|..... ..+.. ..+..|......+.+.+.+.. .....++++|+....
T Consensus 76 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~------- 148 (260)
T PRK06198 76 AAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAH------- 148 (260)
T ss_pred HHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccc-------
Confidence 3689999999874321 12222 235667766666555553321 112456666643211
Q ss_pred HCCCCCCCcEEEeecccHHHHHHHHHHHcC
Q 019990 144 FAPSIPAKNITCLTRLDHNRAMGQISERLK 173 (332)
Q Consensus 144 ~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~ 173 (332)
.+.+....|+.++...+.+...+++.+.
T Consensus 149 --~~~~~~~~Y~~sK~a~~~~~~~~a~e~~ 176 (260)
T PRK06198 149 --GGQPFLAAYCASKGALATLTRNAAYALL 176 (260)
T ss_pred --cCCCCcchhHHHHHHHHHHHHHHHHHhc
Confidence 1122223567777766677666666554
No 248
>PRK08324 short chain dehydrogenase; Validated
Probab=98.14 E-value=1.2e-05 Score=82.11 Aligned_cols=151 Identities=19% Similarity=0.138 Sum_probs=85.7
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh-c-cCCccceEEeCCHHHHh---
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA-A-FPLLKGVVATTDVVEAC--- 79 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~-~-~~~~~~v~~~~~~~~a~--- 79 (332)
.++|+||||+|+||++++..|++.|. +|+++|++. +.+......+... . .....|++...++.+++
T Consensus 422 gk~vLVTGasggIG~~la~~L~~~Ga-------~Vvl~~r~~--~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~ 492 (681)
T PRK08324 422 GKVALVTGAAGGIGKATAKRLAAEGA-------CVVLADLDE--EAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEA 492 (681)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCcC-------EEEEEeCCH--HHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHH
Confidence 36899999999999999999998875 799999864 2222222222210 0 01112333333333333
Q ss_pred ----CCCcEEEEecCCCCCC---CCChh---HHHhhhHHHHHHHHHHHHhhc---CCCcEEEEEeCChhhHHHHHHHHCC
Q 019990 80 ----KDVNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKAQASALEKHA---APNCKVLVVANPANTNALILKEFAP 146 (332)
Q Consensus 80 ----~~aDiVi~~ag~~~~~---~~~~~---~~~~~N~~~~~~i~~~i~~~~---~~~~~viv~snp~~~~~~~~~~~~~ 146 (332)
.+.|+||++||..... ..+.. ..+..|......+++.+.+.- ...++++++|+.... .
T Consensus 493 ~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~---------~ 563 (681)
T PRK08324 493 ALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAV---------N 563 (681)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCcccc---------C
Confidence 3689999999864321 11222 245667776666655554321 112566766653211 1
Q ss_pred CCCCCcEEEeecccHHHHHHHHHHHcC
Q 019990 147 SIPAKNITCLTRLDHNRAMGQISERLK 173 (332)
Q Consensus 147 ~~~~~~i~~~t~l~~~r~~~~~a~~~~ 173 (332)
+.+....|+.+|.....+...++..++
T Consensus 564 ~~~~~~~Y~asKaa~~~l~~~la~e~~ 590 (681)
T PRK08324 564 PGPNFGAYGAAKAAELHLVRQLALELG 590 (681)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHhc
Confidence 112222567777777777777777664
No 249
>PRK06114 short chain dehydrogenase; Provisional
Probab=98.14 E-value=2.7e-05 Score=69.51 Aligned_cols=159 Identities=14% Similarity=0.136 Sum_probs=86.9
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHHh-
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEAC- 79 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a~- 79 (332)
+.++++||||+|+||++++..|++.|. ++.+.|++.. +.+.....++.+.. . .+..|+....++.+++
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-------~v~~~~r~~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~ 78 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-------DVALFDLRTD-DGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVA 78 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCcc-hHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence 457899999999999999999999885 7888887532 12222222332211 0 1123443333333332
Q ss_pred ------CCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHHHhhc--CCCcEEEEEeCChhhHHHHHHHHC
Q 019990 80 ------KDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEKHA--APNCKVLVVANPANTNALILKEFA 145 (332)
Q Consensus 80 ------~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i~~~~--~~~~~viv~snp~~~~~~~~~~~~ 145 (332)
...|++|+.||..... ..+. ...+..|+.....+.+++..+. .....++++|+.....
T Consensus 79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-------- 150 (254)
T PRK06114 79 RTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGII-------- 150 (254)
T ss_pred HHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcC--------
Confidence 3469999999874321 1122 2345667666544444433221 1234666666532110
Q ss_pred CCCC--CCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 146 PSIP--AKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 146 ~~~~--~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
+.+ ....|+.++.....+.+.+++.+. +..++.
T Consensus 151 -~~~~~~~~~Y~~sKaa~~~l~~~la~e~~--~~gi~v 185 (254)
T PRK06114 151 -VNRGLLQAHYNASKAGVIHLSKSLAMEWV--GRGIRV 185 (254)
T ss_pred -CCCCCCcchHHHHHHHHHHHHHHHHHHHh--hcCeEE
Confidence 111 123466677666677777777654 345664
No 250
>PRK07904 short chain dehydrogenase; Provisional
Probab=98.14 E-value=4.2e-05 Score=68.46 Aligned_cols=150 Identities=12% Similarity=0.153 Sum_probs=82.2
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcc-cCCCCCCeEEEEEecccchhhhhhhHhhhhhhc---cC-CccceEEeCCHHHH
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGI-MLGPDQPVILHMLDIEPAAEALNGVKMELIDAA---FP-LLKGVVATTDVVEA 78 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~-~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~---~~-~~~~v~~~~~~~~a 78 (332)
+.++|+||||+|.||.+++..|++.+ . .|.+++++... .+.....++.... .. ...|+....+..+.
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~-------~V~~~~r~~~~-~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~ 78 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPA-------RVVLAALPDDP-RRDAAVAQMKAAGASSVEVIDFDALDTDSHPKV 78 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCC-------eEEEEeCCcch-hHHHHHHHHHhcCCCceEEEEecCCChHHHHHH
Confidence 45789999999999999999998864 4 78888876421 1332333332211 11 11244333332222
Q ss_pred h------CCCcEEEEecCCCCCCCC---Chh---HHHhhhHHHH----HHHHHHHHhhcCCCcEEEEEeCChhhHHHHHH
Q 019990 79 C------KDVNIAVMVGGFPRKEGM---ERK---DVMSKNVSIY----KAQASALEKHAAPNCKVLVVANPANTNALILK 142 (332)
Q Consensus 79 ~------~~aDiVi~~ag~~~~~~~---~~~---~~~~~N~~~~----~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~ 142 (332)
+ .+.|++|+.+|....... +.. +.+..|.... +.+.+.+.+.. ..+++++|+-...
T Consensus 79 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~--~~~iv~isS~~g~------ 150 (253)
T PRK07904 79 IDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG--FGQIIAMSSVAGE------ 150 (253)
T ss_pred HHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC--CceEEEEechhhc------
Confidence 2 268999998887432111 111 2356676433 45666666653 3566777653210
Q ss_pred HHCCCCCCCcEEEeecccHHHHHHHHHHHc
Q 019990 143 EFAPSIPAKNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 143 ~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
.+.+....|+.++.....+...++..+
T Consensus 151 ---~~~~~~~~Y~~sKaa~~~~~~~l~~el 177 (253)
T PRK07904 151 ---RVRRSNFVYGSTKAGLDGFYLGLGEAL 177 (253)
T ss_pred ---CCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 111222346777766655555555443
No 251
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=98.13 E-value=2.2e-05 Score=69.62 Aligned_cols=157 Identities=17% Similarity=0.087 Sum_probs=83.5
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHH---
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEA--- 78 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a--- 78 (332)
+++|+||||+|+||++++..|++.+. ++++.+.+. .+.+.....++.... . ....|+....++.++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~-------~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 73 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGW-------SVGINYARD-AAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDA 73 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCC-------EEEEEeCCC-HHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHH
Confidence 45899999999999999999998875 666654322 122322222232110 0 111233333333222
Q ss_pred ----hCCCcEEEEecCCCCC--C--CCChh---HHHhhhHHHHHHHHHHHHhhc--C---CCcEEEEEeCChhhHHHHHH
Q 019990 79 ----CKDVNIAVMVGGFPRK--E--GMERK---DVMSKNVSIYKAQASALEKHA--A---PNCKVLVVANPANTNALILK 142 (332)
Q Consensus 79 ----~~~aDiVi~~ag~~~~--~--~~~~~---~~~~~N~~~~~~i~~~i~~~~--~---~~~~viv~snp~~~~~~~~~ 142 (332)
+...|++||.||.... + ..+.. ..+..|......+++.+.+.. . +..++|++++....
T Consensus 74 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~------ 147 (248)
T PRK06947 74 VQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASR------ 147 (248)
T ss_pred HHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhc------
Confidence 2368999999986321 1 11222 235667665545543332221 0 13456766653221
Q ss_pred HHCCCCCCC-cEEEeecccHHHHHHHHHHHcCCCCCCee
Q 019990 143 EFAPSIPAK-NITCLTRLDHNRAMGQISERLKVHVSDVK 180 (332)
Q Consensus 143 ~~~~~~~~~-~i~~~t~l~~~r~~~~~a~~~~v~~~~v~ 180 (332)
.+.+.. ..|+.++.....+...+++.+. +..++
T Consensus 148 ---~~~~~~~~~Y~~sK~~~~~~~~~la~~~~--~~~i~ 181 (248)
T PRK06947 148 ---LGSPNEYVDYAGSKGAVDTLTLGLAKELG--PHGVR 181 (248)
T ss_pred ---CCCCCCCcccHhhHHHHHHHHHHHHHHhh--hhCcE
Confidence 111211 2478888877777777877764 33454
No 252
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=98.11 E-value=2.4e-06 Score=75.59 Aligned_cols=182 Identities=13% Similarity=0.145 Sum_probs=113.8
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc-cC---C-ccceEEeCCHHHH
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA-FP---L-LKGVVATTDVVEA 78 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~-~~---~-~~~v~~~~~~~~a 78 (332)
.+++++||||+|||||+.+..+...-- ......+|.-. ...+ ...+.... .+ + ..++.......-.
T Consensus 5 ~~~~vlItgg~gfi~Sn~~~~~~~~~p-----~~~~v~idkL~---~~s~-~~~l~~~~n~p~ykfv~~di~~~~~~~~~ 75 (331)
T KOG0747|consen 5 KEKNVLITGGAGFIGSNFINYLVDKYP-----DYKFVNLDKLD---YCSN-LKNLEPVRNSPNYKFVEGDIADADLVLYL 75 (331)
T ss_pred ccceEEEecCcCcchhhhhhhcccCCC-----CCcEEEEeecc---cccc-cchhhhhccCCCceEeeccccchHHHHhh
Confidence 347899999999999999998875421 12456666321 1111 11111110 11 1 1122111111111
Q ss_pred h--CCCcEEEEecCCCC---CCCCChhHHHhhhHHHHHHHHHHHHhhcCCCc-EEEEEeC-Ch--hhHH-HHHHHHCCCC
Q 019990 79 C--KDVNIAVMVGGFPR---KEGMERKDVMSKNVSIYKAQASALEKHAAPNC-KVLVVAN-PA--NTNA-LILKEFAPSI 148 (332)
Q Consensus 79 ~--~~aDiVi~~ag~~~---~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~-~viv~sn-p~--~~~~-~~~~~~~~~~ 148 (332)
+ ...|.|+|.|.... .. .++.+..+.|+-.+..++++++.++ +. ++|.+|. .| |..- ....+ ++.+
T Consensus 76 ~~~~~id~vihfaa~t~vd~s~-~~~~~~~~nnil~t~~Lle~~~~sg--~i~~fvhvSTdeVYGds~~~~~~~E-~s~~ 151 (331)
T KOG0747|consen 76 FETEEIDTVIHFAAQTHVDRSF-GDSFEFTKNNILSTHVLLEAVRVSG--NIRRFVHVSTDEVYGDSDEDAVVGE-ASLL 151 (331)
T ss_pred hccCchhhhhhhHhhhhhhhhc-CchHHHhcCCchhhhhHHHHHHhcc--CeeEEEEecccceecCccccccccc-cccC
Confidence 1 26799999886432 22 2345567889999999999999886 44 5666663 22 1111 11123 2567
Q ss_pred CCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecCC--CceeecccC
Q 019990 149 PAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHS--STQYPDVNH 198 (332)
Q Consensus 149 ~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~hg--~~~v~~~s~ 198 (332)
+|.+.++.++...+.+-..+.+.+|++...+|.-+|||++. ...+|-|-.
T Consensus 152 nPtnpyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~ 203 (331)
T KOG0747|consen 152 NPTNPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIK 203 (331)
T ss_pred CCCCchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHH
Confidence 78889999999999999999999999999999999999976 466775544
No 253
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.11 E-value=6.2e-05 Score=69.60 Aligned_cols=106 Identities=12% Similarity=0.151 Sum_probs=68.1
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhh----hhhh---cc---CCccceEEeCC
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKME----LIDA---AF---PLLKGVVATTD 74 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~d----l~~~---~~---~~~~~v~~~~~ 74 (332)
.+||+|+| +|-+|+.++..++..|+ +|+++|.+.. .+...... +... .. .....++..++
T Consensus 7 i~~VaVIG-aG~MG~giA~~~a~aG~-------~V~l~D~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~ 76 (321)
T PRK07066 7 IKTFAAIG-SGVIGSGWVARALAHGL-------DVVAWDPAPG--AEAALRANVANAWPALERQGLAPGASPARLRFVAT 76 (321)
T ss_pred CCEEEEEC-cCHHHHHHHHHHHhCCC-------eEEEEeCCHH--HHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCC
Confidence 47899999 69999999999999886 8999998642 22111111 1110 00 01235566677
Q ss_pred HHHHhCCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhh
Q 019990 75 VVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANT 136 (332)
Q Consensus 75 ~~~a~~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~ 136 (332)
+.+++++||+|+-+. + + |.+.-+.+...+.++++|++ |+.||.+..
T Consensus 77 l~~av~~aDlViEav--p-----E-------~l~vK~~lf~~l~~~~~~~a--IlaSnTS~l 122 (321)
T PRK07066 77 IEACVADADFIQESA--P-----E-------REALKLELHERISRAAKPDA--IIASSTSGL 122 (321)
T ss_pred HHHHhcCCCEEEECC--c-----C-------CHHHHHHHHHHHHHhCCCCe--EEEECCCcc
Confidence 888899999999753 1 1 23334566677777775665 667765543
No 254
>PRK07578 short chain dehydrogenase; Provisional
Probab=98.11 E-value=2.6e-05 Score=66.93 Aligned_cols=141 Identities=13% Similarity=0.126 Sum_probs=81.1
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHH---hCCC
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEA---CKDV 82 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a---~~~a 82 (332)
|+++||||+|.||.+++..|.+. . +|.+++++.. . ...|+ ....++.+. +...
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~-------~vi~~~r~~~--~---~~~D~-----------~~~~~~~~~~~~~~~i 56 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-H-------EVITAGRSSG--D---VQVDI-----------TDPASIRALFEKVGKV 56 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-C-------cEEEEecCCC--c---eEecC-----------CChHHHHHHHHhcCCC
Confidence 37999999999999999999876 3 6888876421 0 11122 211222222 3468
Q ss_pred cEEEEecCCCCC-C--CCChhH---HHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCcEEEe
Q 019990 83 NIAVMVGGFPRK-E--GMERKD---VMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCL 156 (332)
Q Consensus 83 DiVi~~ag~~~~-~--~~~~~~---~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~i~~~ 156 (332)
|++|+.||.... + ..+..+ .+..|+.....+.+.+..+-.+...++++|+.... .+.+....|+.
T Consensus 57 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~---------~~~~~~~~Y~~ 127 (199)
T PRK07578 57 DAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSD---------EPIPGGASAAT 127 (199)
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccC---------CCCCCchHHHH
Confidence 999999986421 1 122222 34567766666666665542233455655542210 12222234566
Q ss_pred ecccHHHHHHHHHHHcCCCCCCeeee
Q 019990 157 TRLDHNRAMGQISERLKVHVSDVKNV 182 (332)
Q Consensus 157 t~l~~~r~~~~~a~~~~v~~~~v~~~ 182 (332)
+|-....+...++..+ +..++..
T Consensus 128 sK~a~~~~~~~la~e~---~~gi~v~ 150 (199)
T PRK07578 128 VNGALEGFVKAAALEL---PRGIRIN 150 (199)
T ss_pred HHHHHHHHHHHHHHHc---cCCeEEE
Confidence 6766677777777776 3456643
No 255
>PRK07832 short chain dehydrogenase; Provisional
Probab=98.10 E-value=3.8e-05 Score=69.35 Aligned_cols=156 Identities=13% Similarity=0.100 Sum_probs=86.2
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc---C-CccceEEeCCHH-----
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF---P-LLKGVVATTDVV----- 76 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~---~-~~~~v~~~~~~~----- 76 (332)
++++||||+|+||.+++..|++.|. ++++++++. +.+.....++..... . ...|+....++.
T Consensus 1 k~vlItGas~giG~~la~~la~~G~-------~vv~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 71 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGA-------ELFLTDRDA--DGLAQTVADARALGGTVPEHRALDISDYDAVAAFAAD 71 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHH
Confidence 4799999999999999999998875 788888753 223322223321100 0 112333222222
Q ss_pred --HHhCCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHHHhhc---CCCcEEEEEeCChhhHHHHHHHHC
Q 019990 77 --EACKDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEKHA---APNCKVLVVANPANTNALILKEFA 145 (332)
Q Consensus 77 --~a~~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i~~~~---~~~~~viv~snp~~~~~~~~~~~~ 145 (332)
+.+...|+|||.+|..... ..+. ...+..|+.....+.+.+..+- ...++++++|+....
T Consensus 72 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~--------- 142 (272)
T PRK07832 72 IHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGL--------- 142 (272)
T ss_pred HHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcccccc---------
Confidence 2234589999999864211 1222 2346677777666666654321 123566666654321
Q ss_pred CCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 146 PSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 146 ~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.++.....+...++..+. ...++.
T Consensus 143 ~~~~~~~~Y~~sK~a~~~~~~~l~~e~~--~~~i~v 176 (272)
T PRK07832 143 VALPWHAAYSASKFGLRGLSEVLRFDLA--RHGIGV 176 (272)
T ss_pred CCCCCCcchHHHHHHHHHHHHHHHHHhh--hcCcEE
Confidence 1223233567777666666666665543 234553
No 256
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=98.09 E-value=1.4e-05 Score=70.65 Aligned_cols=148 Identities=16% Similarity=0.076 Sum_probs=80.5
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh--cc-CCccceEEeCCHHHHh---
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA--AF-PLLKGVVATTDVVEAC--- 79 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~--~~-~~~~~v~~~~~~~~a~--- 79 (332)
++++||||+|++|++++..|.+.|. ++.+.+++.. +........+... .. ....|+....++.+++
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~-------~vi~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 74 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGY-------RVIATYFSGN-DCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEI 74 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEeCCcH-HHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 5799999999999999999998775 7888887532 1111111111110 00 1123343333333332
Q ss_pred ----CCCcEEEEecCCCCC---CCCChh---HHHhhhHHHHHHH----HHHHHhhcCCCcEEEEEeCChhhHHHHHHHHC
Q 019990 80 ----KDVNIAVMVGGFPRK---EGMERK---DVMSKNVSIYKAQ----ASALEKHAAPNCKVLVVANPANTNALILKEFA 145 (332)
Q Consensus 80 ----~~aDiVi~~ag~~~~---~~~~~~---~~~~~N~~~~~~i----~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~ 145 (332)
...|++||.+|.... ...+.+ ..++.|+.....+ .+.+++. +..+++++|+....
T Consensus 75 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~iv~iss~~~~--------- 143 (245)
T PRK12824 75 EEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ--GYGRIINISSVNGL--------- 143 (245)
T ss_pred HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh--CCeEEEEECChhhc---------
Confidence 358999999986421 111222 2456676665555 4444443 23477777653211
Q ss_pred CCCCCCcEEEeecccHHHHHHHHHHHc
Q 019990 146 PSIPAKNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 146 ~~~~~~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
.+.+....|+.++.....+.+.+++.+
T Consensus 144 ~~~~~~~~Y~~sK~a~~~~~~~l~~~~ 170 (245)
T PRK12824 144 KGQFGQTNYSAAKAGMIGFTKALASEG 170 (245)
T ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 112222346666665566666666654
No 257
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=98.09 E-value=1.2e-05 Score=88.58 Aligned_cols=177 Identities=11% Similarity=0.075 Sum_probs=99.2
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchh-hhhhhHhhhhhh---------cc-CCccceEEe
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAE-ALNGVKMELIDA---------AF-PLLKGVVAT 72 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~-~~~~~~~dl~~~---------~~-~~~~~v~~~ 72 (332)
++++|+||||+||+|++++..|++.+.. ...+|+...+..... ........+... .. ....++...
T Consensus 970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~---~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~ 1046 (1389)
T TIGR03443 970 TPITVFLTGATGFLGSFILRDLLTRRSN---SNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKE 1046 (1389)
T ss_pred CCceEEEeCCccccHHHHHHHHHhcCCC---CCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCc
Confidence 3578999999999999999999876510 012566655542211 111000000000 00 011222211
Q ss_pred ------CCHHHHhCCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHH-----H--
Q 019990 73 ------TDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNA-----L-- 139 (332)
Q Consensus 73 ------~~~~~a~~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~-----~-- 139 (332)
....+...++|+|||+|+... ...+...+...|+.++.++++.+.+.. .. +++++|+. .+.. .
T Consensus 1047 ~lgl~~~~~~~l~~~~d~iiH~Aa~~~-~~~~~~~~~~~nv~gt~~ll~~a~~~~-~~-~~v~vSS~-~v~~~~~~~~~~ 1122 (1389)
T TIGR03443 1047 KFGLSDEKWSDLTNEVDVIIHNGALVH-WVYPYSKLRDANVIGTINVLNLCAEGK-AK-QFSFVSST-SALDTEYYVNLS 1122 (1389)
T ss_pred cCCcCHHHHHHHHhcCCEEEECCcEec-CccCHHHHHHhHHHHHHHHHHHHHhCC-Cc-eEEEEeCe-eecCcccccchh
Confidence 112334568999999997643 223444555679999999999998763 22 55555542 1100 0
Q ss_pred --HHHHHCCCCC-----------CCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEecC
Q 019990 140 --ILKEFAPSIP-----------AKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNH 188 (332)
Q Consensus 140 --~~~~~~~~~~-----------~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~h 188 (332)
....-..+++ +..-|+.+|...+++....++ .|++...+|...|+|..
T Consensus 1123 ~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~-~g~~~~i~Rpg~v~G~~ 1183 (1389)
T TIGR03443 1123 DELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK-RGLRGCIVRPGYVTGDS 1183 (1389)
T ss_pred hhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh-CCCCEEEECCCccccCC
Confidence 0000000010 112377788888888776655 49999999998999964
No 258
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=98.09 E-value=2.1e-05 Score=69.61 Aligned_cols=158 Identities=18% Similarity=0.150 Sum_probs=80.7
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEE-ecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHHh--
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHML-DIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEAC-- 79 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~-D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a~-- 79 (332)
+.++||||+|+||++++..|++.+. ++.+. +.+. +.......++.... . ....|+....++.+++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~-------~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~ 72 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGY-------TVAVNYQQNL--HAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTA 72 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCCh--HHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHH
Confidence 4799999999999999999998775 66553 3322 22222222332110 0 1123444333333333
Q ss_pred -----CCCcEEEEecCCCCCC----CCCh---hHHHhhhHHHHHHHHHHHHhh-----cCCCcEEEEEeCChhhHHHHHH
Q 019990 80 -----KDVNIAVMVGGFPRKE----GMER---KDVMSKNVSIYKAQASALEKH-----AAPNCKVLVVANPANTNALILK 142 (332)
Q Consensus 80 -----~~aDiVi~~ag~~~~~----~~~~---~~~~~~N~~~~~~i~~~i~~~-----~~~~~~viv~snp~~~~~~~~~ 142 (332)
...|+|||.+|..... ..+. ...+..|+.....+.+.+... +....+++++|+....
T Consensus 73 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~------ 146 (247)
T PRK09730 73 IDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASR------ 146 (247)
T ss_pred HHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhc------
Confidence 3468999999863211 1121 134566766654444433222 1112456666653211
Q ss_pred HHCCCCCCC-cEEEeecccHHHHHHHHHHHc---CCCCCCeee
Q 019990 143 EFAPSIPAK-NITCLTRLDHNRAMGQISERL---KVHVSDVKN 181 (332)
Q Consensus 143 ~~~~~~~~~-~i~~~t~l~~~r~~~~~a~~~---~v~~~~v~~ 181 (332)
.+.+.. ..|+.++.....+...++..+ |++...+++
T Consensus 147 ---~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~p 186 (247)
T PRK09730 147 ---LGAPGEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRP 186 (247)
T ss_pred ---cCCCCcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEe
Confidence 111211 236667766666666666554 444444443
No 259
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.09 E-value=8.5e-05 Score=66.96 Aligned_cols=157 Identities=21% Similarity=0.206 Sum_probs=101.5
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc-----CCccceEEeCCHHHH
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF-----PLLKGVVATTDVVEA 78 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~-----~~~~~v~~~~~~~~a 78 (332)
+.+.|+||||+.-||.++|+.|...|. .++++.... ++++....++..... ....|++..++..++
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~-------~l~lvar~~--rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~ 81 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGA-------KLVLVARRA--RRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKF 81 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-------ceEEeehhh--hhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHH
Confidence 567899999999999999999999885 566666543 244444344443211 112455554444433
Q ss_pred -------hCCCcEEEEecCCCCCCC---CC---hhHHHhhhH----HHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHH
Q 019990 79 -------CKDVNIAVMVGGFPRKEG---ME---RKDVMSKNV----SIYKAQASALEKHAAPNCKVLVVANPANTNALIL 141 (332)
Q Consensus 79 -------~~~aDiVi~~ag~~~~~~---~~---~~~~~~~N~----~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~ 141 (332)
+.+.|+.|+-||..+..- .+ ....++.|. ..++..+..+++.. +++|+++++...-
T Consensus 82 ~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~--~GhIVvisSiaG~----- 154 (282)
T KOG1205|consen 82 VEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN--DGHIVVISSIAGK----- 154 (282)
T ss_pred HHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC--CCeEEEEeccccc-----
Confidence 458999999999865211 11 123456664 55577777777763 5787877765432
Q ss_pred HHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCee
Q 019990 142 KEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVK 180 (332)
Q Consensus 142 ~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~ 180 (332)
..+|...+|..+|..-.-|-..+...+.-....++
T Consensus 155 ----~~~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~ 189 (282)
T KOG1205|consen 155 ----MPLPFRSIYSASKHALEGFFETLRQELIPLGTIII 189 (282)
T ss_pred ----cCCCcccccchHHHHHHHHHHHHHHHhhccCceEE
Confidence 23555558899998888888888777766555555
No 260
>PRK05854 short chain dehydrogenase; Provisional
Probab=98.07 E-value=2.2e-05 Score=72.66 Aligned_cols=170 Identities=11% Similarity=0.031 Sum_probs=94.3
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc----c-CCccceEEeCCHHHH-
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA----F-PLLKGVVATTDVVEA- 78 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~----~-~~~~~v~~~~~~~~a- 78 (332)
.++++||||+|+||.+++..|++.|. +|++.+++. ++......++.... . ....|+....++.++
T Consensus 14 gk~~lITGas~GIG~~~a~~La~~G~-------~Vil~~R~~--~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~ 84 (313)
T PRK05854 14 GKRAVVTGASDGLGLGLARRLAAAGA-------EVILPVRNR--AKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALG 84 (313)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHH
Confidence 47899999999999999999998875 888888753 23333333332210 0 011233332223222
Q ss_pred ------hCCCcEEEEecCCCCCC--CCC---hhHHHhhhHHHH----HHHHHHHHhhcCCCcEEEEEeCChhhHHHHH-H
Q 019990 79 ------CKDVNIAVMVGGFPRKE--GME---RKDVMSKNVSIY----KAQASALEKHAAPNCKVLVVANPANTNALIL-K 142 (332)
Q Consensus 79 ------~~~aDiVi~~ag~~~~~--~~~---~~~~~~~N~~~~----~~i~~~i~~~~~~~~~viv~snp~~~~~~~~-~ 142 (332)
....|++|+.||....+ ..+ .+..+..|.... +.+++.+++. .+++|++|+-......+- .
T Consensus 85 ~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~---~~riv~vsS~~~~~~~~~~~ 161 (313)
T PRK05854 85 EQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG---RARVTSQSSIAARRGAINWD 161 (313)
T ss_pred HHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC---CCCeEEEechhhcCCCcCcc
Confidence 23579999999864221 111 223456665543 4444444432 346666665322110000 0
Q ss_pred H--HCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEec
Q 019990 143 E--FAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGN 187 (332)
Q Consensus 143 ~--~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~ 187 (332)
. ....+++...|+.+|+....+...+++.+......|+.. .+.+
T Consensus 162 ~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~-~v~P 207 (313)
T PRK05854 162 DLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSN-LAHP 207 (313)
T ss_pred cccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEE-EEec
Confidence 0 001234445688899988888888887765545567643 3444
No 261
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=98.07 E-value=7.1e-05 Score=67.08 Aligned_cols=157 Identities=12% Similarity=0.128 Sum_probs=86.6
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh-c---cCCccceEEeCCHHHH-
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA-A---FPLLKGVVATTDVVEA- 78 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~-~---~~~~~~v~~~~~~~~a- 78 (332)
+.++|+||||++.||.+++..|++.|. +|.+.+.+. .+.+.....++... . ..+..|++...++.+.
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~-------~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 78 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGV-------NIAFTYNSN-VEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELF 78 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEcCCC-HHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 357899999999999999999999875 677765432 22333333333211 0 1112344433333222
Q ss_pred ------hCCCcEEEEecCCCCC-------C--CCChh---HHHhhhHHH----HHHHHHHHHhhcCCCcEEEEEeCChhh
Q 019990 79 ------CKDVNIAVMVGGFPRK-------E--GMERK---DVMSKNVSI----YKAQASALEKHAAPNCKVLVVANPANT 136 (332)
Q Consensus 79 ------~~~aDiVi~~ag~~~~-------~--~~~~~---~~~~~N~~~----~~~i~~~i~~~~~~~~~viv~snp~~~ 136 (332)
+...|++|+.||.... + ..+.. ..+..|+.. .+.+++.+++. +.+.+|++|+....
T Consensus 79 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~g~iv~isS~~~~ 156 (260)
T PRK08416 79 KKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKV--GGGSIISLSSTGNL 156 (260)
T ss_pred HHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhcc--CCEEEEEEeccccc
Confidence 2357999999975311 1 01111 133444433 23444444432 23566777653221
Q ss_pred HHHHHHHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 137 NALILKEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 137 ~~~~~~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
...+....|+.+|.....+...+++.++ +..|+.
T Consensus 157 ---------~~~~~~~~Y~asK~a~~~~~~~la~el~--~~gi~v 190 (260)
T PRK08416 157 ---------VYIENYAGHGTSKAAVETMVKYAATELG--EKNIRV 190 (260)
T ss_pred ---------cCCCCcccchhhHHHHHHHHHHHHHHhh--hhCeEE
Confidence 1122223578899988899888888875 344553
No 262
>PRK05855 short chain dehydrogenase; Validated
Probab=98.06 E-value=3.4e-05 Score=76.99 Aligned_cols=157 Identities=15% Similarity=0.056 Sum_probs=91.0
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc---cCCccceEEeCCHHHHh-
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA---FPLLKGVVATTDVVEAC- 79 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~---~~~~~~v~~~~~~~~a~- 79 (332)
+.++++||||+|+||++++..|.+.|. +|.+++++. +.+.....++.... .....|++....+.+.+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~ 384 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA-------EVVASDIDE--AAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAE 384 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence 457899999999999999999998886 799999854 23332222332210 01123444433333332
Q ss_pred ------CCCcEEEEecCCCCCC---CCChh---HHHhhhHHHHHHHHHH----HHhhcCCCcEEEEEeCChhhHHHHHHH
Q 019990 80 ------KDVNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKAQASA----LEKHAAPNCKVLVVANPANTNALILKE 143 (332)
Q Consensus 80 ------~~aDiVi~~ag~~~~~---~~~~~---~~~~~N~~~~~~i~~~----i~~~~~~~~~viv~snp~~~~~~~~~~ 143 (332)
...|++|+.||..... ..+.+ ..+..|+.+...+.+. +.+.+ ..+++|++|+-...
T Consensus 385 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~~------- 456 (582)
T PRK05855 385 WVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERG-TGGHIVNVASAAAY------- 456 (582)
T ss_pred HHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCcEEEEECChhhc-------
Confidence 2479999999974321 12222 2456776665555444 44432 23567777753221
Q ss_pred HCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 144 FAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 144 ~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.+|.....+...++..+. +..|+.
T Consensus 457 --~~~~~~~~Y~~sKaa~~~~~~~l~~e~~--~~gi~v 490 (582)
T PRK05855 457 --APSRSLPAYATSKAAVLMLSECLRAELA--AAGIGV 490 (582)
T ss_pred --cCCCCCcHHHHHHHHHHHHHHHHHHHhc--ccCcEE
Confidence 1223334678888877777777777654 334554
No 263
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=98.06 E-value=3.2e-05 Score=78.95 Aligned_cols=155 Identities=15% Similarity=0.144 Sum_probs=88.3
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh----c-cCCccceEEeCCHHHHh
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA----A-FPLLKGVVATTDVVEAC 79 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~----~-~~~~~~v~~~~~~~~a~ 79 (332)
.++|+||||+|+||++++..|++.|. +|+++|++. +.+.....++... . .....|++...++.+++
T Consensus 414 gkvvLVTGasggIG~aiA~~La~~Ga-------~Vvi~~r~~--~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~ 484 (676)
T TIGR02632 414 RRVAFVTGGAGGIGRETARRLAAEGA-------HVVLADLNL--EAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAF 484 (676)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCC-------EEEEEeCCH--HHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHH
Confidence 46899999999999999999998875 899999853 2233222222210 0 01123444443444443
Q ss_pred C-------CCcEEEEecCCCCCC---CCChhH---HHhhhHHHH----HHHHHHHHhhcCCCcEEEEEeCChhhHHHHHH
Q 019990 80 K-------DVNIAVMVGGFPRKE---GMERKD---VMSKNVSIY----KAQASALEKHAAPNCKVLVVANPANTNALILK 142 (332)
Q Consensus 80 ~-------~aDiVi~~ag~~~~~---~~~~~~---~~~~N~~~~----~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~ 142 (332)
+ +.|+|||.||..... ..+..+ .+..|+... +..+..+++.+ ....++++|+....
T Consensus 485 ~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~-~~g~IV~iSS~~a~------ 557 (676)
T TIGR02632 485 ADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQG-LGGNIVFIASKNAV------ 557 (676)
T ss_pred HHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEEEeChhhc------
Confidence 3 689999999974321 112222 234454433 33444444432 23466666642211
Q ss_pred HHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCee
Q 019990 143 EFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVK 180 (332)
Q Consensus 143 ~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~ 180 (332)
.+.+....|+.+|.....+.+.++..++ +..++
T Consensus 558 ---~~~~~~~aY~aSKaA~~~l~r~lA~el~--~~gIr 590 (676)
T TIGR02632 558 ---YAGKNASAYSAAKAAEAHLARCLAAEGG--TYGIR 590 (676)
T ss_pred ---CCCCCCHHHHHHHHHHHHHHHHHHHHhc--ccCeE
Confidence 1122233578888888888888888765 33455
No 264
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.06 E-value=3.3e-05 Score=70.03 Aligned_cols=162 Identities=14% Similarity=0.127 Sum_probs=90.7
Q ss_pred CCCCCcEEEEEcCC--ChhHHHHHHHHHhcccCCCCCCeEEEEEecccc-hhhhhhhHhhhhhhccCCccceEEeCCHHH
Q 019990 1 MAKNPLRVLVTGAA--GQIGYALVPMIARGIMLGPDQPVILHMLDIEPA-AEALNGVKMELIDAAFPLLKGVVATTDVVE 77 (332)
Q Consensus 1 m~~~~~kI~VtGaa--G~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~-~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~ 77 (332)
|..+.+.++||||+ +-||..++..|++.|. +|.+.+++.. .+.+.....++... ..+..|++...+..+
T Consensus 1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~-------~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~ 72 (274)
T PRK08415 1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGA-------ELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKS 72 (274)
T ss_pred CccCCcEEEEECCCCCCCHHHHHHHHHHHCCC-------EEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHH
Confidence 66667889999986 6899999999999885 7888887521 01111111111100 111234433332222
Q ss_pred H-------hCCCcEEEEecCCCCC-------CCCChh---HHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHH
Q 019990 78 A-------CKDVNIAVMVGGFPRK-------EGMERK---DVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALI 140 (332)
Q Consensus 78 a-------~~~aDiVi~~ag~~~~-------~~~~~~---~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~ 140 (332)
. +...|++|+.||.... ...+.+ ..++.|+.....+.+.+...-..+++++++|+-...
T Consensus 73 ~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~---- 148 (274)
T PRK08415 73 LAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGV---- 148 (274)
T ss_pred HHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCc----
Confidence 2 2357999999997421 112322 246677666555554444332223566666642110
Q ss_pred HHHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 141 LKEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 141 ~~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.+|-.-..+.+.++..+. +..|+.
T Consensus 149 -----~~~~~~~~Y~asKaal~~l~~~la~el~--~~gIrV 182 (274)
T PRK08415 149 -----KYVPHYNVMGVAKAALESSVRYLAVDLG--KKGIRV 182 (274)
T ss_pred -----cCCCcchhhhhHHHHHHHHHHHHHHHhh--hcCeEE
Confidence 1122223577888887888888887764 455664
No 265
>PRK12743 oxidoreductase; Provisional
Probab=98.06 E-value=2.6e-05 Score=69.68 Aligned_cols=152 Identities=11% Similarity=0.095 Sum_probs=83.9
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--cC-CccceEEeCCHHHH---
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--FP-LLKGVVATTDVVEA--- 78 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~~-~~~~v~~~~~~~~a--- 78 (332)
+++|+||||+|+||++++..|++.|. +|.+++.+.. +.+.....++.... .. ...|+....++.++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-------~V~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 73 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-------DIGITWHSDE-EGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDK 73 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCCh-HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHH
Confidence 35799999999999999999999885 7777654321 22222222222111 10 11234333332222
Q ss_pred ----hCCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHHHhhc---CCCcEEEEEeCChhhHHHHHHHHC
Q 019990 79 ----CKDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEKHA---APNCKVLVVANPANTNALILKEFA 145 (332)
Q Consensus 79 ----~~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i~~~~---~~~~~viv~snp~~~~~~~~~~~~ 145 (332)
+...|+|||.+|..... ..+. ...+..|......+.+++..+- ....+++++|+-...
T Consensus 74 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~--------- 144 (256)
T PRK12743 74 LIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH--------- 144 (256)
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc---------
Confidence 23579999999864321 1121 2345677776666666554431 123567777653211
Q ss_pred CCCCCCcEEEeecccHHHHHHHHHHHcC
Q 019990 146 PSIPAKNITCLTRLDHNRAMGQISERLK 173 (332)
Q Consensus 146 ~~~~~~~i~~~t~l~~~r~~~~~a~~~~ 173 (332)
.+.++...|+.++.....+...++..+.
T Consensus 145 ~~~~~~~~Y~~sK~a~~~l~~~la~~~~ 172 (256)
T PRK12743 145 TPLPGASAYTAAKHALGGLTKAMALELV 172 (256)
T ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHhh
Confidence 1223333567777766677677777654
No 266
>PRK07577 short chain dehydrogenase; Provisional
Probab=98.05 E-value=2.1e-05 Score=69.08 Aligned_cols=139 Identities=15% Similarity=0.114 Sum_probs=76.9
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhC----
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACK---- 80 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~---- 80 (332)
.++|+||||+|+||++++..|++.|. ++++++++... .... + ....|+....++.++++
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~-------~v~~~~r~~~~-~~~~------~---~~~~D~~~~~~~~~~~~~~~~ 65 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGH-------QVIGIARSAID-DFPG------E---LFACDLADIEQTAATLAQINE 65 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC-------EEEEEeCCccc-ccCc------e---EEEeeCCCHHHHHHHHHHHHH
Confidence 46899999999999999999998875 78888875421 0000 0 01122322222222222
Q ss_pred --CCcEEEEecCCCCCC---CCChh---HHHhhhHHHHHHHH----HHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCC
Q 019990 81 --DVNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKAQA----SALEKHAAPNCKVLVVANPANTNALILKEFAPSI 148 (332)
Q Consensus 81 --~aDiVi~~ag~~~~~---~~~~~---~~~~~N~~~~~~i~----~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~ 148 (332)
+.|+|||++|..... ..+.. ..+..|......+. +.+++.. ..+++++|... . + +.
T Consensus 66 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~iv~~sS~~-~--~-------~~ 133 (234)
T PRK07577 66 IHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE--QGRIVNICSRA-I--F-------GA 133 (234)
T ss_pred hCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CcEEEEEcccc-c--c-------CC
Confidence 689999999874221 11112 23455655544444 4444432 34666666531 1 0 11
Q ss_pred CCCcEEEeecccHHHHHHHHHHHc
Q 019990 149 PAKNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 149 ~~~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
+....|+.++.....+...+++.+
T Consensus 134 ~~~~~Y~~sK~a~~~~~~~~a~e~ 157 (234)
T PRK07577 134 LDRTSYSAAKSALVGCTRTWALEL 157 (234)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHH
Confidence 222345666766666666666554
No 267
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=98.05 E-value=6.1e-05 Score=67.50 Aligned_cols=159 Identities=13% Similarity=0.124 Sum_probs=86.6
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHH--
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEA-- 78 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a-- 78 (332)
+.++++||||+|.||.+++..|++.+. .+++...+.. +.......++.... . .+..|++...++.+.
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~-------~vvi~~~~~~-~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~ 77 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKA-------KVVINYRSDE-EEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQ 77 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCCH-HHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHH
Confidence 357899999999999999999998875 6776655321 22222222232110 0 111234333232222
Q ss_pred -----hCCCcEEEEecCCCCCC---CCChh---HHHhhhHHHH----HHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHH
Q 019990 79 -----CKDVNIAVMVGGFPRKE---GMERK---DVMSKNVSIY----KAQASALEKHAAPNCKVLVVANPANTNALILKE 143 (332)
Q Consensus 79 -----~~~aDiVi~~ag~~~~~---~~~~~---~~~~~N~~~~----~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~ 143 (332)
+...|++||.||..... ..+.. ..+..|+... +.+++.+.+.. ....++++|+-...
T Consensus 78 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~-~~g~iv~~sS~~~~------- 149 (261)
T PRK08936 78 TAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHD-IKGNIINMSSVHEQ------- 149 (261)
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCcEEEEEcccccc-------
Confidence 23579999999864321 12222 2356665443 34445555442 34566666652110
Q ss_pred HCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeee
Q 019990 144 FAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNV 182 (332)
Q Consensus 144 ~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~ 182 (332)
.+.+....|+.++.....+...+++.+. +..|+..
T Consensus 150 --~~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~gi~v~ 184 (261)
T PRK08936 150 --IPWPLFVHYAASKGGVKLMTETLAMEYA--PKGIRVN 184 (261)
T ss_pred --CCCCCCcccHHHHHHHHHHHHHHHHHHh--hcCeEEE
Confidence 2234344678887766677667776653 3456643
No 268
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.04 E-value=0.0001 Score=67.41 Aligned_cols=104 Identities=26% Similarity=0.281 Sum_probs=64.7
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhh---hhh---ccC---------Cccce
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMEL---IDA---AFP---------LLKGV 69 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl---~~~---~~~---------~~~~v 69 (332)
.+||+|+| +|.+|+.++..|+..|+ +|+++|.+.. .++.....+ .+. ... ...++
T Consensus 3 ~~kIaViG-aG~mG~~iA~~la~~G~-------~V~l~d~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 72 (287)
T PRK08293 3 IKNVTVAG-AGVLGSQIAFQTAFHGF-------DVTIYDISDE--ALEKAKERIAKLADRYVRDLEATKEAPAEAALNRI 72 (287)
T ss_pred ccEEEEEC-CCHHHHHHHHHHHhcCC-------eEEEEeCCHH--HHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCe
Confidence 46899999 69999999999998875 8999998642 222111111 000 000 01356
Q ss_pred EEeCCHHHHhCCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCCh
Q 019990 70 VATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPA 134 (332)
Q Consensus 70 ~~~~~~~~a~~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~ 134 (332)
+.++++.+++++||+||.+.. + +.+..+.+.+.+..+.+++. ++++|..
T Consensus 73 ~~~~d~~~a~~~aDlVieavp-------e-------~~~~k~~~~~~l~~~~~~~~--ii~sntS 121 (287)
T PRK08293 73 TLTTDLAEAVKDADLVIEAVP-------E-------DPEIKGDFYEELAKVAPEKT--IFATNSS 121 (287)
T ss_pred EEeCCHHHHhcCCCEEEEecc-------C-------CHHHHHHHHHHHHhhCCCCC--EEEECcc
Confidence 667788888999999998742 0 12334555666666664554 3345543
No 269
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=98.04 E-value=6.1e-05 Score=67.02 Aligned_cols=155 Identities=18% Similarity=0.172 Sum_probs=84.6
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHH----
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEA---- 78 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a---- 78 (332)
++++||||+|+||.+++..|++.|. ++++++.+. +.+.....++.... . ....|+....++.++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~ 71 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF-------AVAVADLNE--ETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQA 71 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 3689999999999999999998875 788888753 22222222232211 0 112344333333333
Q ss_pred ---hCCCcEEEEecCCCCC-C--CCChh---HHHhhhHHHHHHH----HHHHHhhcCCCcEEEEEeCChhhHHHHHHHHC
Q 019990 79 ---CKDVNIAVMVGGFPRK-E--GMERK---DVMSKNVSIYKAQ----ASALEKHAAPNCKVLVVANPANTNALILKEFA 145 (332)
Q Consensus 79 ---~~~aDiVi~~ag~~~~-~--~~~~~---~~~~~N~~~~~~i----~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~ 145 (332)
+...|+|||.+|.... + +.+.. ..+..|+.....+ ...+.+.. ...+++++|+-...
T Consensus 72 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~~~~--------- 141 (254)
T TIGR02415 72 AEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQG-HGGKIINAASIAGH--------- 141 (254)
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCC-CCeEEEEecchhhc---------
Confidence 2357999999986321 1 22222 2456676554433 34444332 23466655542111
Q ss_pred CCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 146 PSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 146 ~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.++.....+...+++.+. +..++.
T Consensus 142 ~~~~~~~~Y~~sK~a~~~~~~~l~~~~~--~~~i~v 175 (254)
T TIGR02415 142 EGNPILSAYSSTKFAVRGLTQTAAQELA--PKGITV 175 (254)
T ss_pred CCCCCCcchHHHHHHHHHHHHHHHHHhc--ccCeEE
Confidence 1222233567777777777777777654 334553
No 270
>PRK12367 short chain dehydrogenase; Provisional
Probab=98.00 E-value=5.3e-05 Score=67.59 Aligned_cols=104 Identities=12% Similarity=0.030 Sum_probs=63.3
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcE
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNI 84 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDi 84 (332)
.++++||||+|+||++++..|++.|. ++.+++++.. +... . ...........|++...++.+.+...|+
T Consensus 14 ~k~~lITGas~gIG~ala~~l~~~G~-------~Vi~~~r~~~-~~~~-~--~~~~~~~~~~~D~~~~~~~~~~~~~iDi 82 (245)
T PRK12367 14 GKRIGITGASGALGKALTKAFRAKGA-------KVIGLTHSKI-NNSE-S--NDESPNEWIKWECGKEESLDKQLASLDV 82 (245)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-------EEEEEECCch-hhhh-h--hccCCCeEEEeeCCCHHHHHHhcCCCCE
Confidence 46899999999999999999998885 7888887531 1111 0 0000000111233333344555678999
Q ss_pred EEEecCCCCCCCCCh---hHHHhhhHHHHHHHHHHHHh
Q 019990 85 AVMVGGFPRKEGMER---KDVMSKNVSIYKAQASALEK 119 (332)
Q Consensus 85 Vi~~ag~~~~~~~~~---~~~~~~N~~~~~~i~~~i~~ 119 (332)
+|+.||.......+. .+.++.|+.....+++.+..
T Consensus 83 lVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 120 (245)
T PRK12367 83 LILNHGINPGGRQDPENINKALEINALSSWRLLELFED 120 (245)
T ss_pred EEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 999998743222222 33567787766666655443
No 271
>PLN02353 probable UDP-glucose 6-dehydrogenase
Probab=97.99 E-value=0.00016 Score=70.34 Aligned_cols=121 Identities=15% Similarity=0.195 Sum_probs=73.4
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhh--------hhhccC-CccceEEeCCH
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMEL--------IDAAFP-LLKGVVATTDV 75 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl--------~~~~~~-~~~~v~~~~~~ 75 (332)
||||+|+| +|++|..++..|...|. + .+|+.+|++. ++........ .+.... ..+.+..+++.
T Consensus 1 ~m~I~ViG-~GyvGl~~A~~lA~~g~-g----~~V~gvD~~~--~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~ 72 (473)
T PLN02353 1 MVKICCIG-AGYVGGPTMAVIALKCP-D----IEVVVVDISV--PRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDV 72 (473)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhcCC-C----CeEEEEECCH--HHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCH
Confidence 57899999 79999999999998642 1 2799999864 2332211110 000000 01247777888
Q ss_pred HHHhCCCcEEEEecCCCCCCCC-ChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEe-CChh
Q 019990 76 VEACKDVNIAVMVGGFPRKEGM-ERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVA-NPAN 135 (332)
Q Consensus 76 ~~a~~~aDiVi~~ag~~~~~~~-~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~s-np~~ 135 (332)
.+++++||++|++.+.|..... +. + ...+...+...++.+.++.+++..|++-| -|+.
T Consensus 73 ~~~i~~advi~I~V~TP~~~~g~~~-~-~~~Dls~v~~a~~~i~~~l~~~~lVv~~STvp~G 132 (473)
T PLN02353 73 EKHVAEADIVFVSVNTPTKTRGLGA-G-KAADLTYWESAARMIADVSKSDKIVVEKSTVPVK 132 (473)
T ss_pred HHHHhcCCEEEEEeCCCCCCCCCcC-C-CCCcHHHHHHHHHHHHhhCCCCcEEEEeCCCCCC
Confidence 8889999999999988764211 00 0 12345566777777777753333434333 3554
No 272
>PRK06953 short chain dehydrogenase; Provisional
Probab=97.98 E-value=4.7e-05 Score=66.52 Aligned_cols=148 Identities=19% Similarity=0.117 Sum_probs=82.0
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc-CCccceEEeCCHHHH---hC
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF-PLLKGVVATTDVVEA---CK 80 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~a---~~ 80 (332)
|++++||||+|+||++++..|++.|. ++++++++. +.+. ++..... ....|+....++.+. +.
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~-------~v~~~~r~~--~~~~----~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 67 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGW-------RVIATARDA--AALA----ALQALGAEALALDVADPASVAGLAWKLD 67 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCC-------EEEEEECCH--HHHH----HHHhccceEEEecCCCHHHHHHHHHHhc
Confidence 35799999999999999999998775 789998753 1221 1211111 112344433333332 33
Q ss_pred --CCcEEEEecCCCCC---C--CCCh---hHHHhhhHHHHHHHHHHHHhhc-CCCcEEEEEeCChhhHHHHHHHHCCCCC
Q 019990 81 --DVNIAVMVGGFPRK---E--GMER---KDVMSKNVSIYKAQASALEKHA-APNCKVLVVANPANTNALILKEFAPSIP 149 (332)
Q Consensus 81 --~aDiVi~~ag~~~~---~--~~~~---~~~~~~N~~~~~~i~~~i~~~~-~~~~~viv~snp~~~~~~~~~~~~~~~~ 149 (332)
..|+|||++|.... + ..+. ...++.|+.....+++.+.++- .....++++++...... . ....
T Consensus 68 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~----~--~~~~ 141 (222)
T PRK06953 68 GEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIG----D--ATGT 141 (222)
T ss_pred CCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccc----c--ccCC
Confidence 47999999987421 1 1122 2356778887777777776532 11235555554322110 0 0111
Q ss_pred CCcEEEeecccHHHHHHHHHHH
Q 019990 150 AKNITCLTRLDHNRAMGQISER 171 (332)
Q Consensus 150 ~~~i~~~t~l~~~r~~~~~a~~ 171 (332)
+...|+.++.....+...++..
T Consensus 142 ~~~~Y~~sK~a~~~~~~~~~~~ 163 (222)
T PRK06953 142 TGWLYRASKAALNDALRAASLQ 163 (222)
T ss_pred CccccHHhHHHHHHHHHHHhhh
Confidence 1124677777666665555544
No 273
>PRK07677 short chain dehydrogenase; Provisional
Probab=97.97 E-value=0.00013 Score=64.99 Aligned_cols=157 Identities=11% Similarity=0.045 Sum_probs=87.7
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHH----
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEA---- 78 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a---- 78 (332)
++++||||+|.||++++..|++.|. .|++.+++. +.+.....++.... . ....|++...++.+.
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 72 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEEGA-------NVVITGRTK--EKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQI 72 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence 5799999999999999999998875 788888753 22332222232110 0 111233333233222
Q ss_pred ---hCCCcEEEEecCCCCC---CCCCh---hHHHhhhHHHHHHHHHHHHhh--c-CCCcEEEEEeCChhhHHHHHHHHCC
Q 019990 79 ---CKDVNIAVMVGGFPRK---EGMER---KDVMSKNVSIYKAQASALEKH--A-APNCKVLVVANPANTNALILKEFAP 146 (332)
Q Consensus 79 ---~~~aDiVi~~ag~~~~---~~~~~---~~~~~~N~~~~~~i~~~i~~~--~-~~~~~viv~snp~~~~~~~~~~~~~ 146 (332)
+...|+|||.+|.... ...+. ...++.|......+.+++.++ . ...+.++++|+-.. . .
T Consensus 73 ~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~-------~--~ 143 (252)
T PRK07677 73 DEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYA-------W--D 143 (252)
T ss_pred HHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhh-------c--c
Confidence 2367999999985321 12222 234677776666666666432 1 12356666664211 0 1
Q ss_pred CCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 147 SIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 147 ~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
..+....|+.++.....+.+.+++.+.- ...++.
T Consensus 144 ~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~~gi~v 177 (252)
T PRK07677 144 AGPGVIHSAAAKAGVLAMTRTLAVEWGR-KYGIRV 177 (252)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHhCc-ccCeEE
Confidence 1111224677777777777777777642 234553
No 274
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.97 E-value=4.2e-05 Score=68.32 Aligned_cols=156 Identities=15% Similarity=0.123 Sum_probs=86.0
Q ss_pred CCCCCcEEEEEcCCC--hhHHHHHHHHHhcccCCCCCCeEEEEEecccc----------hhhhhhhHhhhhhhc--c-CC
Q 019990 1 MAKNPLRVLVTGAAG--QIGYALVPMIARGIMLGPDQPVILHMLDIEPA----------AEALNGVKMELIDAA--F-PL 65 (332)
Q Consensus 1 m~~~~~kI~VtGaaG--~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~----------~~~~~~~~~dl~~~~--~-~~ 65 (332)
|+.++++|+||||+| .||++++..|+..|. +|.+++++.. .+... ...++.... . ..
T Consensus 1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~-------~vi~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 72 (256)
T PRK12748 1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGI-------DIFFTYWSPYDKTMPWGMHDKEPVL-LKEEIESYGVRCEHM 72 (256)
T ss_pred CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCC-------cEEEEcCCccccccccccchhhHHH-HHHHHHhcCCeEEEE
Confidence 566677899999985 699999999998875 7888876511 01110 111221100 0 11
Q ss_pred ccceEEeCCHHHH-------hCCCcEEEEecCCCCC-C--CCCh---hHHHhhhHHHHHHHHHHHHhhcC--CCcEEEEE
Q 019990 66 LKGVVATTDVVEA-------CKDVNIAVMVGGFPRK-E--GMER---KDVMSKNVSIYKAQASALEKHAA--PNCKVLVV 130 (332)
Q Consensus 66 ~~~v~~~~~~~~a-------~~~aDiVi~~ag~~~~-~--~~~~---~~~~~~N~~~~~~i~~~i~~~~~--~~~~viv~ 130 (332)
..|+....++.++ +...|+|||+||.... + ..+. ...+..|+.....+.+++..... +..+++++
T Consensus 73 ~~D~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ 152 (256)
T PRK12748 73 EIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINL 152 (256)
T ss_pred ECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEE
Confidence 1233332232222 2357999999986321 1 1111 23467787777777776654311 23466666
Q ss_pred eCChhhHHHHHHHHCCCCCCCcEEEeecccHHHHHHHHHHHcC
Q 019990 131 ANPANTNALILKEFAPSIPAKNITCLTRLDHNRAMGQISERLK 173 (332)
Q Consensus 131 snp~~~~~~~~~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~ 173 (332)
|+-.. + .+.+....|+.++.....+...+++.+.
T Consensus 153 ss~~~--------~-~~~~~~~~Y~~sK~a~~~~~~~la~e~~ 186 (256)
T PRK12748 153 TSGQS--------L-GPMPDELAYAATKGAIEAFTKSLAPELA 186 (256)
T ss_pred CCccc--------c-CCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 64211 0 1122223467777777777777777654
No 275
>PRK06483 dihydromonapterin reductase; Provisional
Probab=97.96 E-value=5.2e-05 Score=66.81 Aligned_cols=148 Identities=11% Similarity=0.042 Sum_probs=83.0
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc-CCccceEEeCCHHHH-----
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF-PLLKGVVATTDVVEA----- 78 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~a----- 78 (332)
+++++||||+|.||++++..|++.|. +|.+.+++... . ..++..... ....|+....++.+.
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~~~~--~---~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 69 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-------PVIVSYRTHYP--A---IDGLRQAGAQCIQADFSTNAGIMAFIDELK 69 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-------eEEEEeCCchh--H---HHHHHHcCCEEEEcCCCCHHHHHHHHHHHH
Confidence 35799999999999999999998875 78888875421 1 112211111 112344333332222
Q ss_pred --hCCCcEEEEecCCCCC--C-CCChh---HHHhhhHHHHHHH----HHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCC
Q 019990 79 --CKDVNIAVMVGGFPRK--E-GMERK---DVMSKNVSIYKAQ----ASALEKHAAPNCKVLVVANPANTNALILKEFAP 146 (332)
Q Consensus 79 --~~~aDiVi~~ag~~~~--~-~~~~~---~~~~~N~~~~~~i----~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~ 146 (332)
+...|++||.||.... . ..+.+ ..+..|+.....+ .+.+++.......+++++.... . .
T Consensus 70 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~-------~--~ 140 (236)
T PRK06483 70 QHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVV-------E--K 140 (236)
T ss_pred hhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhh-------c--c
Confidence 2348999999986321 1 11222 2445565544433 3333332101245566554211 1 1
Q ss_pred CCCCCcEEEeecccHHHHHHHHHHHcC
Q 019990 147 SIPAKNITCLTRLDHNRAMGQISERLK 173 (332)
Q Consensus 147 ~~~~~~i~~~t~l~~~r~~~~~a~~~~ 173 (332)
+.+....|+.+|..-..+.+.+++.++
T Consensus 141 ~~~~~~~Y~asKaal~~l~~~~a~e~~ 167 (236)
T PRK06483 141 GSDKHIAYAASKAALDNMTLSFAAKLA 167 (236)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHC
Confidence 233334678888888888888888875
No 276
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=97.96 E-value=5e-05 Score=62.96 Aligned_cols=93 Identities=23% Similarity=0.301 Sum_probs=60.9
Q ss_pred EEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhh--hcc------CCccceEEeCCHHHH
Q 019990 7 RVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELID--AAF------PLLKGVVATTDVVEA 78 (332)
Q Consensus 7 kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~--~~~------~~~~~v~~~~~~~~a 78 (332)
||+|+| +|..|.+++..|..++. +|.|++++. +.++ ++.+ ... .+..++..++|+.++
T Consensus 1 KI~ViG-aG~~G~AlA~~la~~g~-------~V~l~~~~~--~~~~----~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a 66 (157)
T PF01210_consen 1 KIAVIG-AGNWGTALAALLADNGH-------EVTLWGRDE--EQIE----EINETRQNPKYLPGIKLPENIKATTDLEEA 66 (157)
T ss_dssp EEEEES-SSHHHHHHHHHHHHCTE-------EEEEETSCH--HHHH----HHHHHTSETTTSTTSBEETTEEEESSHHHH
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCC-------EEEEEeccH--HHHH----HHHHhCCCCCCCCCcccCcccccccCHHHH
Confidence 799999 69999999999999886 999999863 2222 2222 111 123467778899999
Q ss_pred hCCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEE
Q 019990 79 CKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLV 129 (332)
Q Consensus 79 ~~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv 129 (332)
++++|+|+++. | ....+++++.++.+-.++..+++
T Consensus 67 ~~~ad~Iiiav--P--------------s~~~~~~~~~l~~~l~~~~~ii~ 101 (157)
T PF01210_consen 67 LEDADIIIIAV--P--------------SQAHREVLEQLAPYLKKGQIIIS 101 (157)
T ss_dssp HTT-SEEEE-S-----------------GGGHHHHHHHHTTTSHTT-EEEE
T ss_pred hCcccEEEecc--c--------------HHHHHHHHHHHhhccCCCCEEEE
Confidence 99999999862 1 12235667777776533334343
No 277
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=97.96 E-value=7.5e-05 Score=62.26 Aligned_cols=104 Identities=14% Similarity=0.155 Sum_probs=68.6
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcEE
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIA 85 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDiV 85 (332)
|||+|+||+|.+|+.++...+..|+ +++.+-++.. ++.. ++.. .....|+...+.+.+++.+.|+|
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGH-------eVTAivRn~~--K~~~----~~~~-~i~q~Difd~~~~a~~l~g~DaV 66 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGH-------EVTAIVRNAS--KLAA----RQGV-TILQKDIFDLTSLASDLAGHDAV 66 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCC-------eeEEEEeChH--hccc----cccc-eeecccccChhhhHhhhcCCceE
Confidence 6899999999999999999999887 8888877542 2221 1110 11234666666666889999999
Q ss_pred EEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEe
Q 019990 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVA 131 (332)
Q Consensus 86 i~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~s 131 (332)
|-..|..... . +... .+....+...++..+ ..++++++
T Consensus 67 IsA~~~~~~~-~--~~~~---~k~~~~li~~l~~ag--v~RllVVG 104 (211)
T COG2910 67 ISAFGAGASD-N--DELH---SKSIEALIEALKGAG--VPRLLVVG 104 (211)
T ss_pred EEeccCCCCC-h--hHHH---HHHHHHHHHHHhhcC--CeeEEEEc
Confidence 9987765321 1 1122 233566677777765 34777776
No 278
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.94 E-value=6.7e-05 Score=72.93 Aligned_cols=151 Identities=21% Similarity=0.198 Sum_probs=85.0
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHH------
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEA------ 78 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a------ 78 (332)
.++++||||+|.||..++..|.+.+. +++++|.....+.+.....++.. .....|++...++.+.
T Consensus 210 g~~vlItGasggIG~~la~~l~~~Ga-------~vi~~~~~~~~~~l~~~~~~~~~--~~~~~Dv~~~~~~~~~~~~~~~ 280 (450)
T PRK08261 210 GKVALVTGAARGIGAAIAEVLARDGA-------HVVCLDVPAAGEALAAVANRVGG--TALALDITAPDAPARIAEHLAE 280 (450)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC-------EEEEEeCCccHHHHHHHHHHcCC--eEEEEeCCCHHHHHHHHHHHHH
Confidence 46899999999999999999998875 78888874322222221111110 0111233322222222
Q ss_pred -hCCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHHHhh--cCCCcEEEEEeCChhhHHHHHHHHCCCCC
Q 019990 79 -CKDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEKH--AAPNCKVLVVANPANTNALILKEFAPSIP 149 (332)
Q Consensus 79 -~~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i~~~--~~~~~~viv~snp~~~~~~~~~~~~~~~~ 149 (332)
....|+|||.||..... ..+. ...+..|+.....+.+.+... ..+..+++++|+.... .+.+
T Consensus 281 ~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~---------~g~~ 351 (450)
T PRK08261 281 RHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGI---------AGNR 351 (450)
T ss_pred hCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhc---------CCCC
Confidence 22579999999975321 1122 235677888888888877652 1233567777753211 1122
Q ss_pred CCcEEEeecccHHHHHHHHHHHcC
Q 019990 150 AKNITCLTRLDHNRAMGQISERLK 173 (332)
Q Consensus 150 ~~~i~~~t~l~~~r~~~~~a~~~~ 173 (332)
....|+.++.....+...++..+.
T Consensus 352 ~~~~Y~asKaal~~~~~~la~el~ 375 (450)
T PRK08261 352 GQTNYAASKAGVIGLVQALAPLLA 375 (450)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHh
Confidence 222455566555556666666543
No 279
>PRK06940 short chain dehydrogenase; Provisional
Probab=97.93 E-value=0.00012 Score=66.44 Aligned_cols=161 Identities=16% Similarity=0.121 Sum_probs=87.0
Q ss_pred EEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHHh----
Q 019990 7 RVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEAC---- 79 (332)
Q Consensus 7 kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a~---- 79 (332)
.++|||| |+||++++..|. .|. +|++.|++. +.+.....++.... . .+..|+....++.+++
T Consensus 4 ~~lItGa-~gIG~~la~~l~-~G~-------~Vv~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~ 72 (275)
T PRK06940 4 VVVVIGA-GGIGQAIARRVG-AGK-------KVLLADYNE--ENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQ 72 (275)
T ss_pred EEEEECC-ChHHHHHHHHHh-CCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHH
Confidence 4678885 899999999985 554 899999753 22332222332211 1 1123444333333332
Q ss_pred --CCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHH-HHHH-------HC----
Q 019990 80 --KDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNAL-ILKE-------FA---- 145 (332)
Q Consensus 80 --~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~-~~~~-------~~---- 145 (332)
...|++|+.||.... ..+....++.|+.....+++.+...-.++..++++++....... ...+ ..
T Consensus 73 ~~g~id~li~nAG~~~~-~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (275)
T PRK06940 73 TLGPVTGLVHTAGVSPS-QASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEEL 151 (275)
T ss_pred hcCCCCEEEECCCcCCc-hhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccccccccc
Confidence 358999999997532 22334567888887777777665542122334555543221110 0000 00
Q ss_pred CCC---------CCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 146 PSI---------PAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 146 ~~~---------~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
..+ +....|+.+|.....+.+.+|..++ +..||.
T Consensus 152 ~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gIrv 194 (275)
T PRK06940 152 LSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWG--ERGARI 194 (275)
T ss_pred cccccccccccCCccchhHHHHHHHHHHHHHHHHHHc--cCCeEE
Confidence 000 1122577788877777777777764 455663
No 280
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.93 E-value=6e-05 Score=69.09 Aligned_cols=150 Identities=19% Similarity=0.188 Sum_probs=83.4
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc-c-CCccceEEeCCHHHH----
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA-F-PLLKGVVATTDVVEA---- 78 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~-~-~~~~~v~~~~~~~~a---- 78 (332)
.++|+||||+|.||.+++..|.+.|. +|.+.+++. +.+.....++.... . ....|++...++.++
T Consensus 9 gk~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~ 79 (296)
T PRK05872 9 GKVVVVTGAARGIGAELARRLHARGA-------KLALVDLEE--AELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEA 79 (296)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHH
Confidence 46899999999999999999998885 789998753 23333222332100 0 011344333333222
Q ss_pred ---hCCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHHHhhc-CCCcEEEEEeCChhhHHHHHHHHCCCC
Q 019990 79 ---CKDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEKHA-APNCKVLVVANPANTNALILKEFAPSI 148 (332)
Q Consensus 79 ---~~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i~~~~-~~~~~viv~snp~~~~~~~~~~~~~~~ 148 (332)
+...|+||+.||..... ..+. ...+..|+.....+.+.+..+- ...+.++++|+.... .+.
T Consensus 80 ~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~---------~~~ 150 (296)
T PRK05872 80 VERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAF---------AAA 150 (296)
T ss_pred HHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhc---------CCC
Confidence 24679999999974211 1222 2346678777766666654431 123466666652110 122
Q ss_pred CCCcEEEeecccHHHHHHHHHHHc
Q 019990 149 PAKNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 149 ~~~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
+....|+.+|.....+...++..+
T Consensus 151 ~~~~~Y~asKaal~~~~~~l~~e~ 174 (296)
T PRK05872 151 PGMAAYCASKAGVEAFANALRLEV 174 (296)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHH
Confidence 222245666665556665565543
No 281
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.93 E-value=0.00015 Score=65.05 Aligned_cols=159 Identities=14% Similarity=0.116 Sum_probs=86.0
Q ss_pred CCcEEEEEcC--CChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHH---
Q 019990 4 NPLRVLVTGA--AGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEA--- 78 (332)
Q Consensus 4 ~~~kI~VtGa--aG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a--- 78 (332)
+.++++|||| ++.||.+++..|++.|. .|++.|++...+.++....++.........|+....+..+.
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~-------~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~ 78 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGA-------EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADR 78 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCC-------EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHH
Confidence 3468999998 78999999999998885 78888864322222222222211111112344433332222
Q ss_pred ----hCCCcEEEEecCCCCC-------CCCChhH---HHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHH
Q 019990 79 ----CKDVNIAVMVGGFPRK-------EGMERKD---VMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEF 144 (332)
Q Consensus 79 ----~~~aDiVi~~ag~~~~-------~~~~~~~---~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~ 144 (332)
+...|++|+.||.... ...+.++ .+..|+...-.+.+.+...-.+.+.+++++.. ..
T Consensus 79 ~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~-~~-------- 149 (256)
T PRK07889 79 VREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFD-AT-------- 149 (256)
T ss_pred HHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeec-cc--------
Confidence 3468999999987421 1122222 35667655544444443321123455555421 10
Q ss_pred CCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 145 APSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 145 ~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.+|..-..+.+.++..+. +..||.
T Consensus 150 -~~~~~~~~Y~asKaal~~l~~~la~el~--~~gIrv 183 (256)
T PRK07889 150 -VAWPAYDWMGVAKAALESTNRYLARDLG--PRGIRV 183 (256)
T ss_pred -ccCCccchhHHHHHHHHHHHHHHHHHhh--hcCeEE
Confidence 0112222356778777788888888764 445664
No 282
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=97.93 E-value=4.7e-05 Score=67.16 Aligned_cols=148 Identities=14% Similarity=0.093 Sum_probs=80.9
Q ss_pred EEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHH------
Q 019990 8 VLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEA------ 78 (332)
Q Consensus 8 I~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a------ 78 (332)
|+||||+|+||.+++..|++.|. ++++++.... +.......++.+.. . ....|+....++.++
T Consensus 1 vlItGas~giG~~~a~~l~~~G~-------~v~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 72 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGF-------EICVHYHSGR-SDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIA 72 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCCH-HHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 57999999999999999998875 7777775432 22222222332211 1 112333333333222
Q ss_pred -hCCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHHH----hhcCCCcEEEEEeCChhhHHHHHHHHCCC
Q 019990 79 -CKDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALE----KHAAPNCKVLVVANPANTNALILKEFAPS 147 (332)
Q Consensus 79 -~~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i~----~~~~~~~~viv~snp~~~~~~~~~~~~~~ 147 (332)
+...|.+|+.+|..... ..+. ...+..|+.....+.+++. +.. +..+++++|+.... .+
T Consensus 73 ~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~iv~vsS~~~~---------~~ 142 (239)
T TIGR01831 73 EHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRAR-QGGRIITLASVSGV---------MG 142 (239)
T ss_pred HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhc-CCeEEEEEcchhhc---------cC
Confidence 23469999999864321 1122 2356778777666665542 111 34566777654321 12
Q ss_pred CCCCcEEEeecccHHHHHHHHHHHcC
Q 019990 148 IPAKNITCLTRLDHNRAMGQISERLK 173 (332)
Q Consensus 148 ~~~~~i~~~t~l~~~r~~~~~a~~~~ 173 (332)
.+...-|+.++.....+.+.++..+.
T Consensus 143 ~~~~~~Y~~sK~a~~~~~~~la~e~~ 168 (239)
T TIGR01831 143 NRGQVNYSAAKAGLIGATKALAVELA 168 (239)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHh
Confidence 23333566677655556666666643
No 283
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=97.93 E-value=0.00014 Score=65.45 Aligned_cols=158 Identities=11% Similarity=0.071 Sum_probs=85.4
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh---c-cCCccceEEeCCH----HH
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA---A-FPLLKGVVATTDV----VE 77 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~---~-~~~~~~v~~~~~~----~~ 77 (332)
..++||||+|+||++++..|++.|. +|++.+.+. .+.+.....++... . ..+..|+.....+ .+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~-------~V~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~ 73 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGY-------RVVLHYHRS-AAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEA 73 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCC-------eEEEEcCCc-HHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHH
Confidence 3689999999999999999999885 777765432 12333333333211 0 0112344443322 11
Q ss_pred -------HhCCCcEEEEecCCCCC-----CCCC------------hhHHHhhhHHHHHHHHHHHHhhcC--------CCc
Q 019990 78 -------ACKDVNIAVMVGGFPRK-----EGME------------RKDVMSKNVSIYKAQASALEKHAA--------PNC 125 (332)
Q Consensus 78 -------a~~~aDiVi~~ag~~~~-----~~~~------------~~~~~~~N~~~~~~i~~~i~~~~~--------~~~ 125 (332)
.+...|+|||.||.... ...+ -.+.+..|......+.+.+..... ...
T Consensus 74 ~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~ 153 (267)
T TIGR02685 74 IIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNL 153 (267)
T ss_pred HHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCe
Confidence 12468999999986321 0010 123466776555444444332210 112
Q ss_pred EEEEEeCChhhHHHHHHHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeee
Q 019990 126 KVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNV 182 (332)
Q Consensus 126 ~viv~snp~~~~~~~~~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~ 182 (332)
.++.+++.... ...+....|+.+|.....+...++..++ +..++..
T Consensus 154 ~iv~~~s~~~~---------~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~v~ 199 (267)
T TIGR02685 154 SIVNLCDAMTD---------QPLLGFTMYTMAKHALEGLTRSAALELA--PLQIRVN 199 (267)
T ss_pred EEEEehhhhcc---------CCCcccchhHHHHHHHHHHHHHHHHHHh--hhCeEEE
Confidence 34444432211 1233334678888888888888888764 4456643
No 284
>PRK07062 short chain dehydrogenase; Provisional
Probab=97.92 E-value=0.00012 Score=65.72 Aligned_cols=155 Identities=17% Similarity=0.143 Sum_probs=83.1
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh----cc-CCccceEEeCCHHHH-
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA----AF-PLLKGVVATTDVVEA- 78 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~----~~-~~~~~v~~~~~~~~a- 78 (332)
.+.++||||+|.||.+++..|++.|. +|++.+++. +.+.....++... .. ....|+....++.+.
T Consensus 8 ~k~~lItGas~giG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 78 (265)
T PRK07062 8 GRVAVVTGGSSGIGLATVELLLEAGA-------SVAICGRDE--ERLASAEARLREKFPGARLLAARCDVLDEADVAAFA 78 (265)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHH
Confidence 46799999999999999999998875 788998854 2333333333221 00 111233333233222
Q ss_pred ------hCCCcEEEEecCCCCCC---CCChhH---HHhhhHH----HHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHH
Q 019990 79 ------CKDVNIAVMVGGFPRKE---GMERKD---VMSKNVS----IYKAQASALEKHAAPNCKVLVVANPANTNALILK 142 (332)
Q Consensus 79 ------~~~aDiVi~~ag~~~~~---~~~~~~---~~~~N~~----~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~ 142 (332)
+...|++|+.||..... ..+..+ .+..|.. .++.++..+++.. .+.++++|+....
T Consensus 79 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~------ 150 (265)
T PRK07062 79 AAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA--AASIVCVNSLLAL------ 150 (265)
T ss_pred HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC--CcEEEEecccccc------
Confidence 23579999999874321 112222 2344433 3445555555432 3466666653211
Q ss_pred HHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 143 EFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 143 ~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.++-....+.+.++..+. +..|+.
T Consensus 151 ---~~~~~~~~y~asKaal~~~~~~la~e~~--~~gi~v 184 (265)
T PRK07062 151 ---QPEPHMVATSAARAGLLNLVKSLATELA--PKGVRV 184 (265)
T ss_pred ---CCCCCchHhHHHHHHHHHHHHHHHHHhh--hcCeEE
Confidence 1111112355556555566666666654 344654
No 285
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=97.92 E-value=4.8e-05 Score=69.15 Aligned_cols=98 Identities=6% Similarity=0.066 Sum_probs=62.1
Q ss_pred EEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHh------C
Q 019990 7 RVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEAC------K 80 (332)
Q Consensus 7 kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~------~ 80 (332)
+|+||||+|++|++++..|++.++ +|+.+.++... ... ... .....++.....+.+++ +
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~-------~V~~~~R~~~~--~~~-----~~~-~~~~~d~~d~~~l~~a~~~~~~~~ 65 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASV-------PFLVASRSSSS--SAG-----PNE-KHVKFDWLDEDTWDNPFSSDDGME 65 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCC-------cEEEEeCCCcc--ccC-----CCC-ccccccCCCHHHHHHHHhcccCcC
Confidence 589999999999999999998875 78888875421 110 000 01123455555666777 6
Q ss_pred C-CcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeC
Q 019990 81 D-VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVAN 132 (332)
Q Consensus 81 ~-aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~sn 132 (332)
+ +|.|+++++... .. ....+++++++++.+ -. ++|..|.
T Consensus 66 g~~d~v~~~~~~~~----~~-------~~~~~~~i~aa~~~g-v~-~~V~~Ss 105 (285)
T TIGR03649 66 PEISAVYLVAPPIP----DL-------APPMIKFIDFARSKG-VR-RFVLLSA 105 (285)
T ss_pred CceeEEEEeCCCCC----Ch-------hHHHHHHHHHHHHcC-CC-EEEEeec
Confidence 7 999999865321 11 233457788888775 22 5666553
No 286
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=97.92 E-value=0.0001 Score=66.15 Aligned_cols=160 Identities=14% Similarity=0.178 Sum_probs=87.8
Q ss_pred CCcEEEEEcCC--ChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh---ccCCccceEEeCCHHHH
Q 019990 4 NPLRVLVTGAA--GQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA---AFPLLKGVVATTDVVEA 78 (332)
Q Consensus 4 ~~~kI~VtGaa--G~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~---~~~~~~~v~~~~~~~~a 78 (332)
..+.++||||+ +-||.+++..|++.|. +|.+.+++....+......++... ...+..|+....++.+.
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~-------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~ 77 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-------ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEET 77 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCC-------EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHH
Confidence 45679999975 6899999999999885 777765432111111111222111 01122344443333322
Q ss_pred -------hCCCcEEEEecCCCCC-----C--CCChh---HHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHH
Q 019990 79 -------CKDVNIAVMVGGFPRK-----E--GMERK---DVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALIL 141 (332)
Q Consensus 79 -------~~~aDiVi~~ag~~~~-----~--~~~~~---~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~ 141 (332)
+...|++|+.||.... + ..+.+ ..+..|+.....+.+.+...-...++++++|+....
T Consensus 78 ~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~----- 152 (258)
T PRK07370 78 FETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGV----- 152 (258)
T ss_pred HHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccc-----
Confidence 2357999999986421 1 11222 244566655544444433321123566766653211
Q ss_pred HHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 142 KEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 142 ~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.|....|+.+|-....+.+.++..++ +..|+.
T Consensus 153 ----~~~~~~~~Y~asKaal~~l~~~la~el~--~~gI~V 186 (258)
T PRK07370 153 ----RAIPNYNVMGVAKAALEASVRYLAAELG--PKNIRV 186 (258)
T ss_pred ----cCCcccchhhHHHHHHHHHHHHHHHHhC--cCCeEE
Confidence 1233334678888888888888888875 566764
No 287
>PRK06484 short chain dehydrogenase; Validated
Probab=97.92 E-value=5.7e-05 Score=74.76 Aligned_cols=154 Identities=18% Similarity=0.117 Sum_probs=82.4
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHH--
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEA-- 78 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a-- 78 (332)
|..+.+.++||||++.||.+++..|.+.|. +|.+++++. +.+.....++......+..|+....++.++
T Consensus 1 ~~~~~k~~lITGas~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 71 (520)
T PRK06484 1 SKAQSRVVLVTGAAGGIGRAACQRFARAGD-------QVVVADRNV--ERARERADSLGPDHHALAMDVSDEAQIREGFE 71 (520)
T ss_pred CCCCCeEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhCCceeEEEeccCCHHHHHHHHH
Confidence 444567899999999999999999999885 789998753 233222222211001112344333333222
Q ss_pred -----hCCCcEEEEecCCCC---CC--CCCh---hHHHhhhHHHHHHHHHHHHhhc---CCCcEEEEEeCChhhHHHHHH
Q 019990 79 -----CKDVNIAVMVGGFPR---KE--GMER---KDVMSKNVSIYKAQASALEKHA---APNCKVLVVANPANTNALILK 142 (332)
Q Consensus 79 -----~~~aDiVi~~ag~~~---~~--~~~~---~~~~~~N~~~~~~i~~~i~~~~---~~~~~viv~snp~~~~~~~~~ 142 (332)
+...|++|+.||... .+ ..+. ...+..|+.....+.+++..+- ....+++++|+-...
T Consensus 72 ~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~------ 145 (520)
T PRK06484 72 QLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGL------ 145 (520)
T ss_pred HHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccC------
Confidence 245899999998721 11 1222 2345677666555555444331 122366776653211
Q ss_pred HHCCCCCCCcEEEeecccHHHHHHHHHHHc
Q 019990 143 EFAPSIPAKNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 143 ~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
.+.+....|+.+|.....+.+.+++.+
T Consensus 146 ---~~~~~~~~Y~asKaal~~l~~~la~e~ 172 (520)
T PRK06484 146 ---VALPKRTAYSASKAAVISLTRSLACEW 172 (520)
T ss_pred ---CCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence 011222245555555555555555543
No 288
>PLN02780 ketoreductase/ oxidoreductase
Probab=97.90 E-value=6.6e-05 Score=69.70 Aligned_cols=157 Identities=17% Similarity=0.181 Sum_probs=89.5
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc----c-CCccceEEe-C----C
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA----F-PLLKGVVAT-T----D 74 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~----~-~~~~~v~~~-~----~ 74 (332)
.+.++||||+|.||.+++..|++.|. +|.+++++. +.++....++.... . ....|+... . .
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~G~-------~Vil~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~ 123 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARKGL-------NLVLVARNP--DKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKR 123 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-------CEEEEECCH--HHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHH
Confidence 46799999999999999999999885 799999864 34444444443210 0 011223210 1 1
Q ss_pred HHHHhC--CCcEEEEecCCCCC---C--CCChh---HHHhhhHHHHHHHHHHH----HhhcCCCcEEEEEeCChhhHHHH
Q 019990 75 VVEACK--DVNIAVMVGGFPRK---E--GMERK---DVMSKNVSIYKAQASAL----EKHAAPNCKVLVVANPANTNALI 140 (332)
Q Consensus 75 ~~~a~~--~aDiVi~~ag~~~~---~--~~~~~---~~~~~N~~~~~~i~~~i----~~~~~~~~~viv~snp~~~~~~~ 140 (332)
+.+.+. +.|++|+.||.... + ..+.+ ..++.|+.....+.+.+ .+. ..+.++++|+.....
T Consensus 124 l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~~g~IV~iSS~a~~~--- 198 (320)
T PLN02780 124 IKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKR--KKGAIINIGSGAAIV--- 198 (320)
T ss_pred HHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhc--CCcEEEEEechhhcc---
Confidence 222333 35599999987421 1 12222 35667776665555544 333 235667776532110
Q ss_pred HHHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 141 LKEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 141 ~~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+..|....|+.+|.....+...++..+. +..|+.
T Consensus 199 ----~~~~p~~~~Y~aSKaal~~~~~~L~~El~--~~gI~V 233 (320)
T PLN02780 199 ----IPSDPLYAVYAATKAYIDQFSRCLYVEYK--KSGIDV 233 (320)
T ss_pred ----CCCCccchHHHHHHHHHHHHHHHHHHHHh--ccCeEE
Confidence 01122233678888888888888887764 344553
No 289
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.90 E-value=0.00013 Score=65.39 Aligned_cols=159 Identities=13% Similarity=0.068 Sum_probs=86.8
Q ss_pred CCcEEEEEcCC--ChhHHHHHHHHHhcccCCCCCCeEEEEEecccch-hhhhhhHhhhhhhccCCccceEEeCCHHHH--
Q 019990 4 NPLRVLVTGAA--GQIGYALVPMIARGIMLGPDQPVILHMLDIEPAA-EALNGVKMELIDAAFPLLKGVVATTDVVEA-- 78 (332)
Q Consensus 4 ~~~kI~VtGaa--G~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~-~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a-- 78 (332)
+.+.++||||+ +.||.+++..|++.|. +|.+.|++... +.+.....++... .....|++...+..+.
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-------~v~l~~r~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~v~~~~~ 80 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-------ELAVTYLNDKARPYVEPLAEELDAP-IFLPLDVREPGQLEAVFA 80 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-------EEEEEeCChhhHHHHHHHHHhhccc-eEEecCcCCHHHHHHHHH
Confidence 45779999987 4899999999998875 78888875321 1112111222111 1112344433333222
Q ss_pred -----hCCCcEEEEecCCCCC-------CCCCh---hHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHH
Q 019990 79 -----CKDVNIAVMVGGFPRK-------EGMER---KDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKE 143 (332)
Q Consensus 79 -----~~~aDiVi~~ag~~~~-------~~~~~---~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~ 143 (332)
+...|++|+.||.... ...+. ...++.|+...-.+.+.+..+-...+.++++|+....
T Consensus 81 ~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~------- 153 (258)
T PRK07533 81 RIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAE------- 153 (258)
T ss_pred HHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccc-------
Confidence 2357999999986421 01222 2345667666655555444332123456666542211
Q ss_pred HCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 144 FAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 144 ~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
...+....|+.+|-.-..+.+.++..++ +..|+.
T Consensus 154 --~~~~~~~~Y~asKaal~~l~~~la~el~--~~gI~V 187 (258)
T PRK07533 154 --KVVENYNLMGPVKAALESSVRYLAAELG--PKGIRV 187 (258)
T ss_pred --cCCccchhhHHHHHHHHHHHHHHHHHhh--hcCcEE
Confidence 1122223567778777777777877765 445654
No 290
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=97.88 E-value=0.00011 Score=64.55 Aligned_cols=156 Identities=11% Similarity=0.114 Sum_probs=81.8
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc-CCccceEEeCC---HHHHhCC
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF-PLLKGVVATTD---VVEACKD 81 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~---~~~a~~~ 81 (332)
|+|+||||+|+||++++..|++.+. + ..+.+.+++...+ ..+... ....|++...+ +.+.+..
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~-~----~~v~~~~~~~~~~--------~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 67 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYP-D----ATVHATYRHHKPD--------FQHDNVQWHALDVTDEAEIKQLSEQFTQ 67 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCC-C----CEEEEEccCCccc--------cccCceEEEEecCCCHHHHHHHHHhcCC
Confidence 4799999999999999999988642 1 2555555432110 101000 01123322222 2334567
Q ss_pred CcEEEEecCCCCCC---------CCChh---HHHhhhHHHHHHHHHHHHhhcC--CCcEEEEEeCChhhHHHHHHHHCCC
Q 019990 82 VNIAVMVGGFPRKE---------GMERK---DVMSKNVSIYKAQASALEKHAA--PNCKVLVVANPANTNALILKEFAPS 147 (332)
Q Consensus 82 aDiVi~~ag~~~~~---------~~~~~---~~~~~N~~~~~~i~~~i~~~~~--~~~~viv~snp~~~~~~~~~~~~~~ 147 (332)
.|+||+.||..... ..+.+ ..+..|......+.+.+..+.. ...+++++|...... .. ..
T Consensus 68 id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~----~~--~~ 141 (235)
T PRK09009 68 LDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSI----SD--NR 141 (235)
T ss_pred CCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeeccccc----cc--CC
Confidence 89999999874311 11222 2344554444444444433211 124566665422211 00 11
Q ss_pred CCCCcEEEeecccHHHHHHHHHHHcCCCCCCee
Q 019990 148 IPAKNITCLTRLDHNRAMGQISERLKVHVSDVK 180 (332)
Q Consensus 148 ~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~ 180 (332)
.+....|+.+|.....+...++..+.-....++
T Consensus 142 ~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~ 174 (235)
T PRK09009 142 LGGWYSYRASKAALNMFLKTLSIEWQRSLKHGV 174 (235)
T ss_pred CCCcchhhhhHHHHHHHHHHHHHHhhcccCCeE
Confidence 233346788888888888888877654334565
No 291
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=97.88 E-value=9.6e-05 Score=65.11 Aligned_cols=155 Identities=13% Similarity=0.075 Sum_probs=80.4
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh--cc-CCccceEEeCCHHH-----
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA--AF-PLLKGVVATTDVVE----- 77 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~--~~-~~~~~v~~~~~~~~----- 77 (332)
+.++||||+|+||++++..|++.|. +++++.... .+.......++... .. ....|+....++.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-------~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 72 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGY-------RVAANCGPN-EERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKV 72 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCC-HHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHH
Confidence 3589999999999999999998875 677766521 12222111122111 00 01123332222222
Q ss_pred --HhCCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHH----HHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHC
Q 019990 78 --ACKDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKA----QASALEKHAAPNCKVLVVANPANTNALILKEFA 145 (332)
Q Consensus 78 --a~~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~----i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~ 145 (332)
.+...|+|||.+|..... ..+. ...+..|...... +...+++.. ..+++++|+....
T Consensus 73 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~iss~~~~--------- 141 (242)
T TIGR01829 73 EAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG--WGRIINISSVNGQ--------- 141 (242)
T ss_pred HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CcEEEEEcchhhc---------
Confidence 234589999999864311 1121 2345667665444 444444432 3466666653211
Q ss_pred CCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 146 PSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 146 ~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.++.....+...+++.+. +..++.
T Consensus 142 ~~~~~~~~y~~sk~a~~~~~~~la~~~~--~~~i~v 175 (242)
T TIGR01829 142 KGQFGQTNYSAAKAGMIGFTKALAQEGA--TKGVTV 175 (242)
T ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHhh--hhCeEE
Confidence 1222223456666655566666666543 334553
No 292
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=97.87 E-value=0.00057 Score=62.66 Aligned_cols=110 Identities=22% Similarity=0.266 Sum_probs=72.3
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhh--hcc------CCccceEEeCCHH
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELID--AAF------PLLKGVVATTDVV 76 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~--~~~------~~~~~v~~~~~~~ 76 (332)
++||+|+| +|.=|++|+..|.++++ +|++..+++ + ...++.. .+. .+..++..+.|+.
T Consensus 1 ~~kI~ViG-aGswGTALA~~la~ng~-------~V~lw~r~~--~----~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~ 66 (329)
T COG0240 1 MMKIAVIG-AGSWGTALAKVLARNGH-------EVRLWGRDE--E----IVAEINETRENPKYLPGILLPPNLKATTDLA 66 (329)
T ss_pred CceEEEEc-CChHHHHHHHHHHhcCC-------eeEEEecCH--H----HHHHHHhcCcCccccCCccCCcccccccCHH
Confidence 47899999 69999999999999885 899998753 1 2223322 222 1235677788999
Q ss_pred HHhCCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEe-----CChhhHHHHHHHH
Q 019990 77 EACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVA-----NPANTNALILKEF 144 (332)
Q Consensus 77 ~a~~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~s-----np~~~~~~~~~~~ 144 (332)
++++++|+|++.. | ...++++++.+..+-.++.+++.++ ++...+..++.+.
T Consensus 67 ~a~~~ad~iv~av--P--------------s~~~r~v~~~l~~~l~~~~~iv~~sKGie~~t~~l~seii~e~ 123 (329)
T COG0240 67 EALDGADIIVIAV--P--------------SQALREVLRQLKPLLLKDAIIVSATKGLEPETGRLLSEIIEEE 123 (329)
T ss_pred HHHhcCCEEEEEC--C--------------hHHHHHHHHHHhhhccCCCeEEEEeccccCCCcchHHHHHHHH
Confidence 9999999999862 2 2334555555544433556667776 2233455555554
No 293
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.87 E-value=0.00017 Score=67.82 Aligned_cols=100 Identities=18% Similarity=0.149 Sum_probs=62.9
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc-CCccceEEeCCHHHHhCCCc
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF-PLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~a~~~aD 83 (332)
|+||+|+| +|+||+.++..|++.+. .+|.+.|+.. ++.... .+..+... ...-|+.....+.+.+++.|
T Consensus 1 m~~ilviG-aG~Vg~~va~~la~~~d------~~V~iAdRs~--~~~~~i-~~~~~~~v~~~~vD~~d~~al~~li~~~d 70 (389)
T COG1748 1 MMKILVIG-AGGVGSVVAHKLAQNGD------GEVTIADRSK--EKCARI-AELIGGKVEALQVDAADVDALVALIKDFD 70 (389)
T ss_pred CCcEEEEC-CchhHHHHHHHHHhCCC------ceEEEEeCCH--HHHHHH-HhhccccceeEEecccChHHHHHHHhcCC
Confidence 57899999 59999999999998774 2899999863 222211 11111101 11224444556778899999
Q ss_pred EEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCC
Q 019990 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANP 133 (332)
Q Consensus 84 iVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp 133 (332)
+||+++.... ...++++|.+.+ +.++-+|+-
T Consensus 71 ~VIn~~p~~~----------------~~~i~ka~i~~g---v~yvDts~~ 101 (389)
T COG1748 71 LVINAAPPFV----------------DLTILKACIKTG---VDYVDTSYY 101 (389)
T ss_pred EEEEeCCchh----------------hHHHHHHHHHhC---CCEEEcccC
Confidence 9999874321 125667777765 345555653
No 294
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.87 E-value=6.6e-05 Score=69.52 Aligned_cols=171 Identities=13% Similarity=0.074 Sum_probs=95.1
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhh-hh---hhc-------cCCccceEEe--
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKME-LI---DAA-------FPLLKGVVAT-- 72 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~d-l~---~~~-------~~~~~~v~~~-- 72 (332)
++|++|||+||+|.+++..|+..... +|++.=+..+++........ +. +.. .+..+++...
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~------kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~l 74 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDA------KVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDL 74 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCC------cEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccC
Confidence 46999999999999999999876432 44443333332222111111 11 110 0122333311
Q ss_pred ---CCHHHHh-CCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHH-------
Q 019990 73 ---TDVVEAC-KDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALIL------- 141 (332)
Q Consensus 73 ---~~~~~a~-~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~------- 141 (332)
....+.+ ..+|.|+|.|+... .-.+...+...|+.++.++++.+... +++ .+..+|+ ..+.++..
T Consensus 75 GL~~~~~~~La~~vD~I~H~gA~Vn-~v~pYs~L~~~NVlGT~evlrLa~~g-k~K-p~~yVSs-isv~~~~~~~~~~~~ 150 (382)
T COG3320 75 GLSERTWQELAENVDLIIHNAALVN-HVFPYSELRGANVLGTAEVLRLAATG-KPK-PLHYVSS-ISVGETEYYSNFTVD 150 (382)
T ss_pred CCCHHHHHHHhhhcceEEecchhhc-ccCcHHHhcCcchHhHHHHHHHHhcC-CCc-eeEEEee-eeeccccccCCCccc
Confidence 1112334 45999999987532 12345667889999999999888764 233 2444443 11111100
Q ss_pred -HHHCCCCCCCc----EEEeecccHHHHHHHHHHHcCCCCCCeeeeEEEec
Q 019990 142 -KEFAPSIPAKN----ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGN 187 (332)
Q Consensus 142 -~~~~~~~~~~~----i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~ 187 (332)
.+........+ -|+-+|-.++++.....+. |++...+|+-+|.|.
T Consensus 151 ~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gd 200 (382)
T COG3320 151 FDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGD 200 (382)
T ss_pred cccccccccccCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeecc
Confidence 00000011111 2455778888888877666 999999998877775
No 295
>PRK07831 short chain dehydrogenase; Provisional
Probab=97.86 E-value=9.3e-05 Score=66.34 Aligned_cols=157 Identities=15% Similarity=0.052 Sum_probs=85.5
Q ss_pred CcEEEEEcCCC-hhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh----cc-CCccceEEeCCHHHH
Q 019990 5 PLRVLVTGAAG-QIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA----AF-PLLKGVVATTDVVEA 78 (332)
Q Consensus 5 ~~kI~VtGaaG-~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~----~~-~~~~~v~~~~~~~~a 78 (332)
.++++||||+| .||++++..|++.|. +|.+.|++. +.+.....++... .. ....|+....++.+.
T Consensus 17 ~k~vlItG~sg~gIG~~ia~~l~~~G~-------~V~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 87 (262)
T PRK07831 17 GKVVLVTAAAGTGIGSATARRALEEGA-------RVVISDIHE--RRLGETADELAAELGLGRVEAVVCDVTSEAQVDAL 87 (262)
T ss_pred CCEEEEECCCcccHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHH
Confidence 47899999987 599999999998885 788888753 2333322233220 00 011233332223222
Q ss_pred h-------CCCcEEEEecCCCCCC---CCChh---HHHhhhHHHHHHHHHHHHhh---cCCCcEEEEEeCChhhHHHHHH
Q 019990 79 C-------KDVNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKAQASALEKH---AAPNCKVLVVANPANTNALILK 142 (332)
Q Consensus 79 ~-------~~aDiVi~~ag~~~~~---~~~~~---~~~~~N~~~~~~i~~~i~~~---~~~~~~viv~snp~~~~~~~~~ 142 (332)
+ ...|++|+.||..... ..+.. ..+..|......+.+.+... ......++.+++....
T Consensus 88 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~------ 161 (262)
T PRK07831 88 IDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGW------ 161 (262)
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhc------
Confidence 2 3579999999863211 11222 23455665554444443321 1113455555442211
Q ss_pred HHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 143 EFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 143 ~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.+|.....+.+.++..+. +..++.
T Consensus 162 ---~~~~~~~~Y~~sKaal~~~~~~la~e~~--~~gI~v 195 (262)
T PRK07831 162 ---RAQHGQAHYAAAKAGVMALTRCSALEAA--EYGVRI 195 (262)
T ss_pred ---CCCCCCcchHHHHHHHHHHHHHHHHHhC--ccCeEE
Confidence 1223334678888888888888877654 345653
No 296
>PRK07201 short chain dehydrogenase; Provisional
Probab=97.86 E-value=9.9e-05 Score=75.16 Aligned_cols=148 Identities=16% Similarity=0.099 Sum_probs=84.6
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHHhC-
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEACK- 80 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a~~- 80 (332)
.++++||||+|+||.+++..|++.|. +|.+++++. +.+.....++.... . ....|+....++.++++
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~ 441 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGA-------TVFLVARNG--EALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKD 441 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence 46899999999999999999998875 899998754 23332222332111 0 11234443334444333
Q ss_pred ------CCcEEEEecCCCCCC--C-C-----ChhHHHhhhHHHHHHHHHH----HHhhcCCCcEEEEEeCChhhHHHHHH
Q 019990 81 ------DVNIAVMVGGFPRKE--G-M-----ERKDVMSKNVSIYKAQASA----LEKHAAPNCKVLVVANPANTNALILK 142 (332)
Q Consensus 81 ------~aDiVi~~ag~~~~~--~-~-----~~~~~~~~N~~~~~~i~~~----i~~~~~~~~~viv~snp~~~~~~~~~ 142 (332)
..|++|+.||..... . . .....+..|......+... +++.+ ...+|++|+....
T Consensus 442 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~g~iv~isS~~~~------ 513 (657)
T PRK07201 442 ILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR--FGHVVNVSSIGVQ------ 513 (657)
T ss_pred HHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC--CCEEEEECChhhc------
Confidence 689999999864211 0 0 1123456776665444444 44332 3466776653211
Q ss_pred HHCCCCCCCcEEEeecccHHHHHHHHHHHc
Q 019990 143 EFAPSIPAKNITCLTRLDHNRAMGQISERL 172 (332)
Q Consensus 143 ~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~ 172 (332)
.+.+....|+.+|.....+...++..+
T Consensus 514 ---~~~~~~~~Y~~sK~a~~~~~~~la~e~ 540 (657)
T PRK07201 514 ---TNAPRFSAYVASKAALDAFSDVAASET 540 (657)
T ss_pred ---CCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 112222346777777777777776665
No 297
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.84 E-value=0.00042 Score=63.99 Aligned_cols=78 Identities=14% Similarity=0.217 Sum_probs=50.4
Q ss_pred CCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh-c--c------CCccceEEe
Q 019990 2 AKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA-A--F------PLLKGVVAT 72 (332)
Q Consensus 2 ~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~-~--~------~~~~~v~~~ 72 (332)
.++.+||+|+| +|.+|+.++..|+..++ +|.++|.+. +.+......+... . . .....+..+
T Consensus 1 ~~~~~~I~vIG-aG~mG~~iA~~l~~~g~-------~V~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 70 (311)
T PRK06130 1 MNPIQNLAIIG-AGTMGSGIAALFARKGL-------QVVLIDVME--GALERARGVIERALGVYAPLGIASAGMGRIRME 70 (311)
T ss_pred CCCccEEEEEC-CCHHHHHHHHHHHhCCC-------eEEEEECCH--HHHHHHHHHHHHHHHHhhhcccHHHHhhceEEe
Confidence 03467899999 69999999999998775 899999854 2222211111100 0 0 011234555
Q ss_pred CCHHHHhCCCcEEEEec
Q 019990 73 TDVVEACKDVNIAVMVG 89 (332)
Q Consensus 73 ~~~~~a~~~aDiVi~~a 89 (332)
.+..+++++||+||.+.
T Consensus 71 ~~~~~~~~~aDlVi~av 87 (311)
T PRK06130 71 AGLAAAVSGADLVIEAV 87 (311)
T ss_pred CCHHHHhccCCEEEEec
Confidence 67777789999999874
No 298
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.84 E-value=0.00026 Score=64.01 Aligned_cols=157 Identities=16% Similarity=0.162 Sum_probs=87.8
Q ss_pred CCcEEEEEcCCC--hhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh---ccCCccceEEeCCHHHH
Q 019990 4 NPLRVLVTGAAG--QIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA---AFPLLKGVVATTDVVEA 78 (332)
Q Consensus 4 ~~~kI~VtGaaG--~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~---~~~~~~~v~~~~~~~~a 78 (332)
+.+.++||||++ .||.+++..|++.|. +|++.+++.. ... ...++.+. ...+..|++...+..+.
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-------~V~~~~r~~~--~~~-~~~~~~~~~g~~~~~~~Dv~d~~~v~~~ 75 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-------ELAFTYQGEA--LGK-RVKPLAESLGSDFVLPCDVEDIASVDAV 75 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-------EEEEecCchH--HHH-HHHHHHHhcCCceEEeCCCCCHHHHHHH
Confidence 346799999886 899999999999885 7888886421 111 11222110 01112344443333222
Q ss_pred -------hCCCcEEEEecCCCCC-----C--CCChhH---HHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHH
Q 019990 79 -------CKDVNIAVMVGGFPRK-----E--GMERKD---VMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALIL 141 (332)
Q Consensus 79 -------~~~aDiVi~~ag~~~~-----~--~~~~~~---~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~ 141 (332)
+...|++|+.||.... + ..+.++ .+..|......+.+++..+-...+.+|++++....
T Consensus 76 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~----- 150 (271)
T PRK06505 76 FEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGST----- 150 (271)
T ss_pred HHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCcc-----
Confidence 2357999999986421 1 122222 34556655544444443321123466666653211
Q ss_pred HHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 142 KEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 142 ~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.|....|+.+|-....+.+.+|..++ +..||.
T Consensus 151 ----~~~~~~~~Y~asKaAl~~l~r~la~el~--~~gIrV 184 (271)
T PRK06505 151 ----RVMPNYNVMGVAKAALEASVRYLAADYG--PQGIRV 184 (271)
T ss_pred ----ccCCccchhhhhHHHHHHHHHHHHHHHh--hcCeEE
Confidence 1123333678888888888888888864 455663
No 299
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=97.84 E-value=0.00038 Score=61.00 Aligned_cols=74 Identities=16% Similarity=0.176 Sum_probs=47.4
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc--CCccceEEeCCHHHHhCCCc
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF--PLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~--~~~~~v~~~~~~~~a~~~aD 83 (332)
|||+|+||+|.+|++++..|.+.+. +|.+++++. +++.....+..+... .....+.. .+..++++++|
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~-------~V~v~~r~~--~~~~~l~~~~~~~~~~~g~~~~~~~-~~~~ea~~~aD 70 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGN-------KIIIGSRDL--EKAEEAAAKALEELGHGGSDIKVTG-ADNAEAAKRAD 70 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC-------EEEEEEcCH--HHHHHHHHHHHhhccccCCCceEEE-eChHHHHhcCC
Confidence 4799998789999999999998775 888898753 233332222211100 00011222 24567789999
Q ss_pred EEEEec
Q 019990 84 IAVMVG 89 (332)
Q Consensus 84 iVi~~a 89 (332)
+||++.
T Consensus 71 vVilav 76 (219)
T TIGR01915 71 VVILAV 76 (219)
T ss_pred EEEEEC
Confidence 999874
No 300
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=97.83 E-value=0.0005 Score=66.12 Aligned_cols=106 Identities=25% Similarity=0.364 Sum_probs=64.6
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCC--------------ccceEE
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPL--------------LKGVVA 71 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~--------------~~~v~~ 71 (332)
|||+|+| .|.+|..++..|...|+ +|..+|++. ++.. ++.....+. .+.++.
T Consensus 1 mkI~vIG-lG~~G~~lA~~La~~G~-------~V~~~d~~~--~~v~----~l~~g~~~~~e~~l~~~~~~~~~~g~l~~ 66 (411)
T TIGR03026 1 MKIAVIG-LGYVGLPLAALLADLGH-------EVTGVDIDQ--EKVD----KLNKGKSPIYEPGLDELLAKALAAGRLRA 66 (411)
T ss_pred CEEEEEC-CCchhHHHHHHHHhcCC-------eEEEEECCH--HHHH----HhhcCCCCCCCCCHHHHHHHhhhcCCeEE
Confidence 4799999 79999999999998886 899999864 2222 122110000 123556
Q ss_pred eCCHHHHhCCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEe
Q 019990 72 TTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVA 131 (332)
Q Consensus 72 ~~~~~~a~~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~s 131 (332)
+.+..++++++|+||++...+..... ..+...+....+.+..+..++..++..|
T Consensus 67 ~~~~~~~~~~advvii~vpt~~~~~~------~~d~~~v~~~~~~i~~~l~~g~lvi~~S 120 (411)
T TIGR03026 67 TTDYEDAIRDADVIIICVPTPLKEDG------SPDLSYVESAAETIAKHLRKGATVVLES 120 (411)
T ss_pred ECCHHHHHhhCCEEEEEeCCCCCCCC------CcChHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 66777788999999999876543211 1123334444455554433444444444
No 301
>PRK07791 short chain dehydrogenase; Provisional
Probab=97.81 E-value=0.00014 Score=66.31 Aligned_cols=160 Identities=16% Similarity=0.102 Sum_probs=86.7
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEeccc-------chhhhhhhHhhhhhhc--c-CCccceEEeC
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEP-------AAEALNGVKMELIDAA--F-PLLKGVVATT 73 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~-------~~~~~~~~~~dl~~~~--~-~~~~~v~~~~ 73 (332)
+.+.++||||++.||.+++..|++.|. ++.+.|.+. ..+.+.....++.... . ....|+....
T Consensus 5 ~~k~~lITGas~GIG~aia~~la~~G~-------~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~ 77 (286)
T PRK07791 5 DGRVVIVTGAGGGIGRAHALAFAAEGA-------RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWD 77 (286)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHH
Confidence 457899999999999999999998875 788887642 0012222223332111 0 1123444333
Q ss_pred CHHHH-------hCCCcEEEEecCCCCCC---CCChh---HHHhhhHHHHHHHHHHH----HhhcC----CCcEEEEEeC
Q 019990 74 DVVEA-------CKDVNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKAQASAL----EKHAA----PNCKVLVVAN 132 (332)
Q Consensus 74 ~~~~a-------~~~aDiVi~~ag~~~~~---~~~~~---~~~~~N~~~~~~i~~~i----~~~~~----~~~~viv~sn 132 (332)
+..+. +...|++|+.||..... ..+.+ ..+..|+.....+.+.+ .+... ..+.+|++|+
T Consensus 78 ~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS 157 (286)
T PRK07791 78 GAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSS 157 (286)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCc
Confidence 22222 24579999999874321 12222 34566766654444433 32210 1246676665
Q ss_pred ChhhHHHHHHHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 133 PANTNALILKEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 133 p~~~~~~~~~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.... .+.+....|+.+|-....+.+.++..++ +..||.
T Consensus 158 ~~~~---------~~~~~~~~Y~asKaal~~l~~~la~el~--~~gIrV 195 (286)
T PRK07791 158 GAGL---------QGSVGQGNYSAAKAGIAALTLVAAAELG--RYGVTV 195 (286)
T ss_pred hhhC---------cCCCCchhhHHHHHHHHHHHHHHHHHHH--HhCeEE
Confidence 3221 1122223567777666677777777654 345664
No 302
>PRK08017 oxidoreductase; Provisional
Probab=97.80 E-value=0.00011 Score=65.32 Aligned_cols=151 Identities=16% Similarity=0.162 Sum_probs=81.5
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc-CCccceEEeCCHHHH---h--
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF-PLLKGVVATTDVVEA---C-- 79 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~a---~-- 79 (332)
++|+||||+|+||++++..|++.|. ++++++++. ++++. +.+... ....|+....++.++ +
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-------~v~~~~r~~--~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~i~~ 69 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-------RVLAACRKP--DDVAR----MNSLGFTGILLDLDDPESVERAADEVIA 69 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHhHH----HHhCCCeEEEeecCCHHHHHHHHHHHHH
Confidence 4799999999999999999998875 788888753 22221 111111 111223222222221 1
Q ss_pred ---CCCcEEEEecCCCCC-C--CCCh---hHHHhhhHHHHHH----HHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCC
Q 019990 80 ---KDVNIAVMVGGFPRK-E--GMER---KDVMSKNVSIYKA----QASALEKHAAPNCKVLVVANPANTNALILKEFAP 146 (332)
Q Consensus 80 ---~~aDiVi~~ag~~~~-~--~~~~---~~~~~~N~~~~~~----i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~ 146 (332)
...|.+|+.+|.... + ..+. .+.++.|+..... +++.+.+.. ...++++++-... .
T Consensus 70 ~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~---------~ 138 (256)
T PRK08017 70 LTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG--EGRIVMTSSVMGL---------I 138 (256)
T ss_pred hcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC--CCEEEEEcCcccc---------c
Confidence 346899999886321 1 1122 2356677765544 455555543 2355666642111 1
Q ss_pred CCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeee
Q 019990 147 SIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNV 182 (332)
Q Consensus 147 ~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~ 182 (332)
+.+....|+.++...+.+...++..+. ...++..
T Consensus 139 ~~~~~~~Y~~sK~~~~~~~~~l~~~~~--~~~i~v~ 172 (256)
T PRK08017 139 STPGRGAYAASKYALEAWSDALRMELR--HSGIKVS 172 (256)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHh--hcCCEEE
Confidence 123333567777777776666655433 3345543
No 303
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=97.80 E-value=8.9e-05 Score=61.47 Aligned_cols=149 Identities=16% Similarity=0.137 Sum_probs=81.3
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc---cCCccceEEeCCHH------
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA---FPLLKGVVATTDVV------ 76 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~---~~~~~~v~~~~~~~------ 76 (332)
+.++||||+|.||..++..|++.+- ..+.+++++++.+.......++.... .....|+....++.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~------~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~ 74 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGA------RVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEV 74 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTT------EEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCc------eEEEEeeeccccccccccccccccccccccccccccccccccccccccc
Confidence 3689999999999999999998743 27888887521223333333333211 01112222222222
Q ss_pred -HHhCCCcEEEEecCCCCCCC---CCh---hHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCC
Q 019990 77 -EACKDVNIAVMVGGFPRKEG---MER---KDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIP 149 (332)
Q Consensus 77 -~a~~~aDiVi~~ag~~~~~~---~~~---~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~ 149 (332)
+.....|++|+.+|...... .+. ...+..|+.....+.+.+.. . +...++++|+.... .+.+
T Consensus 75 ~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~-~~g~iv~~sS~~~~---------~~~~ 143 (167)
T PF00106_consen 75 IKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP-Q-GGGKIVNISSIAGV---------RGSP 143 (167)
T ss_dssp HHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH-H-TTEEEEEEEEGGGT---------SSST
T ss_pred ccccccccccccccccccccccccccchhhhhccccccceeeeeeehhee-c-cccceEEecchhhc---------cCCC
Confidence 12347899999999864211 111 13556676666666666666 3 35677777764432 1222
Q ss_pred CCcEEEeecccHHHHHHHHHHH
Q 019990 150 AKNITCLTRLDHNRAMGQISER 171 (332)
Q Consensus 150 ~~~i~~~t~l~~~r~~~~~a~~ 171 (332)
..-.|+.++-.-..+...+++.
T Consensus 144 ~~~~Y~askaal~~~~~~la~e 165 (167)
T PF00106_consen 144 GMSAYSASKAALRGLTQSLAAE 165 (167)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHh
Confidence 2223455554444554444443
No 304
>PRK08862 short chain dehydrogenase; Provisional
Probab=97.79 E-value=0.00086 Score=59.01 Aligned_cols=156 Identities=12% Similarity=0.006 Sum_probs=86.2
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc---CCccceEEeCCHHH
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF---PLLKGVVATTDVVE 77 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~---~~~~~v~~~~~~~~ 77 (332)
|+...+.++||||++.||.+++..|++.|. +|.+++++. +.++....++..... .+..|+....++.+
T Consensus 1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~-------~V~~~~r~~--~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~ 71 (227)
T PRK08862 1 MDIKSSIILITSAGSVLGRTISCHFARLGA-------TLILCDQDQ--SALKDTYEQCSALTDNVYSFQLKDFSQESIRH 71 (227)
T ss_pred CCCCCeEEEEECCccHHHHHHHHHHHHCCC-------EEEEEcCCH--HHHHHHHHHHHhcCCCeEEEEccCCCHHHHHH
Confidence 666678899999999999999999999886 788888754 333333323322110 11123333222222
Q ss_pred -------HhC-CCcEEEEecCCCCC--C--CCChhH---HHhhhHHH----HHHHHHHHHhhcCCCcEEEEEeCChhhHH
Q 019990 78 -------ACK-DVNIAVMVGGFPRK--E--GMERKD---VMSKNVSI----YKAQASALEKHAAPNCKVLVVANPANTNA 138 (332)
Q Consensus 78 -------a~~-~aDiVi~~ag~~~~--~--~~~~~~---~~~~N~~~----~~~i~~~i~~~~~~~~~viv~snp~~~~~ 138 (332)
.+. ..|++|+.||.... + ..+.++ .+..|... .+.++..+.+.. ..+.++++|+..
T Consensus 72 ~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~-~~g~Iv~isS~~---- 146 (227)
T PRK08862 72 LFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRN-KKGVIVNVISHD---- 146 (227)
T ss_pred HHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCceEEEEecCC----
Confidence 223 68999999974211 1 123222 22334333 234445555432 235666666421
Q ss_pred HHHHHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCee
Q 019990 139 LILKEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVK 180 (332)
Q Consensus 139 ~~~~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~ 180 (332)
+++....|+.+|-.-..+.+.++..+. +..+|
T Consensus 147 --------~~~~~~~Y~asKaal~~~~~~la~el~--~~~Ir 178 (227)
T PRK08862 147 --------DHQDLTGVESSNALVSGFTHSWAKELT--PFNIR 178 (227)
T ss_pred --------CCCCcchhHHHHHHHHHHHHHHHHHHh--hcCcE
Confidence 112222456677777777777777653 34455
No 305
>PRK06125 short chain dehydrogenase; Provisional
Probab=97.79 E-value=0.00037 Score=62.32 Aligned_cols=119 Identities=19% Similarity=0.175 Sum_probs=67.3
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh-c--c-CCccceEEeCCHHH-
Q 019990 3 KNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA-A--F-PLLKGVVATTDVVE- 77 (332)
Q Consensus 3 ~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~-~--~-~~~~~v~~~~~~~~- 77 (332)
...++++||||+|.+|.+++..|++.|. +|.+++++. +.+.....++... . . ....|+....++.+
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~ 75 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAEGC-------HLHLVARDA--DALEALAADLRAAHGVDVAVHALDLSSPEAREQL 75 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHH
Confidence 3567899999999999999999998875 789998753 2333222223211 0 0 01123333333322
Q ss_pred --HhCCCcEEEEecCCCCC-C--CCChh---HHHhhhHHHHHHHHH----HHHhhcCCCcEEEEEeC
Q 019990 78 --ACKDVNIAVMVGGFPRK-E--GMERK---DVMSKNVSIYKAQAS----ALEKHAAPNCKVLVVAN 132 (332)
Q Consensus 78 --a~~~aDiVi~~ag~~~~-~--~~~~~---~~~~~N~~~~~~i~~----~i~~~~~~~~~viv~sn 132 (332)
.+...|++|+.+|.... + ..+.+ ..+..|+.....+.+ .+++. ....++++++
T Consensus 76 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~g~iv~iss 140 (259)
T PRK06125 76 AAEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKAR--GSGVIVNVIG 140 (259)
T ss_pred HHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCcEEEEecC
Confidence 23468999999986421 1 12222 235566655444444 44443 2345666554
No 306
>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]
Probab=97.79 E-value=0.00024 Score=64.92 Aligned_cols=104 Identities=26% Similarity=0.358 Sum_probs=67.4
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhh---hHhh-hhhhc----c------CCccceE
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNG---VKME-LIDAA----F------PLLKGVV 70 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~---~~~d-l~~~~----~------~~~~~v~ 70 (332)
.+||+|+| +|.+|+.+|..++..|+ +|+++|++. +.+.. .... +.... . .....++
T Consensus 3 i~kv~ViG-aG~MG~gIA~~~A~~G~-------~V~l~D~~~--~~~~~~~~~i~~~l~k~~~~g~l~~~~~~~~l~~i~ 72 (307)
T COG1250 3 IKKVAVIG-AGVMGAGIAAVFALAGY-------DVVLKDISP--EALERALAYIEKNLEKLVEKGKLTEEEADAALARIT 72 (307)
T ss_pred ccEEEEEc-ccchhHHHHHHHhhcCC-------ceEEEeCCH--HHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHhhcc
Confidence 46899999 69999999999988666 899999873 22211 1111 11110 0 0123455
Q ss_pred EeCCHHHHhCCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChh
Q 019990 71 ATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPAN 135 (332)
Q Consensus 71 ~~~~~~~a~~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~ 135 (332)
..+++ .++++||+||-.. ..|.+.-+++...+.++++|++ |++||.+.
T Consensus 73 ~~~~~-~~l~~~DlVIEAv--------------~E~levK~~vf~~l~~~~~~~a--IlASNTSs 120 (307)
T COG1250 73 PTTDL-AALKDADLVIEAV--------------VEDLELKKQVFAELEALAKPDA--ILASNTSS 120 (307)
T ss_pred ccCch-hHhccCCEEEEec--------------cccHHHHHHHHHHHHhhcCCCc--EEeeccCC
Confidence 45554 3799999998652 1245566788888888886665 66787543
No 307
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.78 E-value=0.00019 Score=64.03 Aligned_cols=160 Identities=13% Similarity=0.156 Sum_probs=88.3
Q ss_pred CCC--CCcEEEEEcCC--ChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc-cCCccceEEeCCH
Q 019990 1 MAK--NPLRVLVTGAA--GQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA-FPLLKGVVATTDV 75 (332)
Q Consensus 1 m~~--~~~kI~VtGaa--G~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~-~~~~~~v~~~~~~ 75 (332)
|+. +.+.++||||+ +.||..++..|++.|. +|++.+++. .......++.... ..+..|+....+.
T Consensus 1 ~~~~l~~k~~lItGas~~~gIG~a~a~~la~~G~-------~Vi~~~r~~---~~~~~~~~~~~~~~~~~~~Dl~~~~~v 70 (252)
T PRK06079 1 MSGILSGKKIVVMGVANKRSIAWGCAQAIKDQGA-------TVIYTYQND---RMKKSLQKLVDEEDLLVECDVASDESI 70 (252)
T ss_pred CccccCCCEEEEeCCCCCCchHHHHHHHHHHCCC-------EEEEecCch---HHHHHHHhhccCceeEEeCCCCCHHHH
Confidence 554 34779999988 6899999999999885 788887642 2222222221111 1112344433333
Q ss_pred HHH-------hCCCcEEEEecCCCCC-------CCCChhH---HHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHH
Q 019990 76 VEA-------CKDVNIAVMVGGFPRK-------EGMERKD---VMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNA 138 (332)
Q Consensus 76 ~~a-------~~~aDiVi~~ag~~~~-------~~~~~~~---~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~ 138 (332)
.++ +...|++|+.||.... ...+.++ .+..|+.....+.+.+..+-...++++++++-...
T Consensus 71 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~-- 148 (252)
T PRK06079 71 ERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSE-- 148 (252)
T ss_pred HHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCcc--
Confidence 222 2357999999986421 1122222 34556655444444444332123566666642211
Q ss_pred HHHHHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 139 LILKEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 139 ~~~~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.+|-.-..+.+.++..+. +..|+.
T Consensus 149 -------~~~~~~~~Y~asKaal~~l~~~la~el~--~~gI~v 182 (252)
T PRK06079 149 -------RAIPNYNVMGIAKAALESSVRYLARDLG--KKGIRV 182 (252)
T ss_pred -------ccCCcchhhHHHHHHHHHHHHHHHHHhh--hcCcEE
Confidence 1122223567788888888888887764 455664
No 308
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.78 E-value=0.00036 Score=62.53 Aligned_cols=160 Identities=11% Similarity=0.094 Sum_probs=87.1
Q ss_pred CCcEEEEEcCC--ChhHHHHHHHHHhcccCCCCCCeEEEEEecccc-hhhhhhhHhhhhhhcc-CCccceEEeCCHHHH-
Q 019990 4 NPLRVLVTGAA--GQIGYALVPMIARGIMLGPDQPVILHMLDIEPA-AEALNGVKMELIDAAF-PLLKGVVATTDVVEA- 78 (332)
Q Consensus 4 ~~~kI~VtGaa--G~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~-~~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~a- 78 (332)
..+.++||||+ +-||.++++.|++.|. +|.+.+++.. .+.++....++..... ....|+....+..+.
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-------~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~ 78 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-------KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACF 78 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-------EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHH
Confidence 34689999986 7999999999999885 7888875321 1122222222211101 112344433333222
Q ss_pred ------hCCCcEEEEecCCCCC-----C--CCChhH---HHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHH
Q 019990 79 ------CKDVNIAVMVGGFPRK-----E--GMERKD---VMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILK 142 (332)
Q Consensus 79 ------~~~aDiVi~~ag~~~~-----~--~~~~~~---~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~ 142 (332)
+...|++|+.||.... + ..+.++ .+..|......+.+.+...-.+.+.+|++|+....
T Consensus 79 ~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~------ 152 (257)
T PRK08594 79 ETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGE------ 152 (257)
T ss_pred HHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCc------
Confidence 2357999999986421 1 122222 23445554444444443332234567777753221
Q ss_pred HHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 143 EFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 143 ~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.+|..-..+.+.++..+. +..||.
T Consensus 153 ---~~~~~~~~Y~asKaal~~l~~~la~el~--~~gIrv 186 (257)
T PRK08594 153 ---RVVQNYNVMGVAKASLEASVKYLANDLG--KDGIRV 186 (257)
T ss_pred ---cCCCCCchhHHHHHHHHHHHHHHHHHhh--hcCCEE
Confidence 1122223578888888888888888764 345653
No 309
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.78 E-value=0.00052 Score=62.51 Aligned_cols=103 Identities=25% Similarity=0.384 Sum_probs=62.3
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhh-hh--H----hhhhhhc-cC------CccceE
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALN-GV--K----MELIDAA-FP------LLKGVV 70 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~-~~--~----~dl~~~~-~~------~~~~v~ 70 (332)
++||+|+| +|.+|..++..|+..++ +|+++|.+.. .+. +. . ..+.+.. .. ...+++
T Consensus 3 ~~kI~VIG-~G~mG~~ia~~la~~g~-------~V~~~d~~~~--~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~l~ 72 (282)
T PRK05808 3 IQKIGVIG-AGTMGNGIAQVCAVAGY-------DVVMVDISDA--AVDRGLATITKSLDRLVKKGKMTEADKEAALARIT 72 (282)
T ss_pred ccEEEEEc-cCHHHHHHHHHHHHCCC-------ceEEEeCCHH--HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeE
Confidence 45899999 69999999999998876 7999998642 221 10 0 0111100 00 112455
Q ss_pred EeCCHHHHhCCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCCh
Q 019990 71 ATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPA 134 (332)
Q Consensus 71 ~~~~~~~a~~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~ 134 (332)
.+++. +++++||+||.++- + +...-+++...+.++++++..+ .||..
T Consensus 73 ~~~~~-~~~~~aDlVi~av~----e----------~~~~k~~~~~~l~~~~~~~~il--~s~ts 119 (282)
T PRK05808 73 GTTDL-DDLKDADLVIEAAT----E----------NMDLKKKIFAQLDEIAKPEAIL--ATNTS 119 (282)
T ss_pred EeCCH-HHhccCCeeeeccc----c----------cHHHHHHHHHHHHhhCCCCcEE--EECCC
Confidence 56665 45899999998741 0 1233346666677776556533 45433
No 310
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.78 E-value=0.00045 Score=63.24 Aligned_cols=75 Identities=20% Similarity=0.258 Sum_probs=49.0
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhh----h----hccC------Cccce
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELI----D----AAFP------LLKGV 69 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~----~----~~~~------~~~~v 69 (332)
+.+||+|+| +|.+|+.++..|+..|+ +|.++|.+. +.+......+. . ...+ ...++
T Consensus 3 ~~~kI~vIG-aG~mG~~iA~~la~~G~-------~V~l~d~~~--~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i 72 (292)
T PRK07530 3 AIKKVGVIG-AGQMGNGIAHVCALAGY-------DVLLNDVSA--DRLEAGLATINGNLARQVAKGKISEEARAAALARI 72 (292)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCe
Confidence 457899999 69999999999998886 899999864 22222111111 0 0000 01345
Q ss_pred EEeCCHHHHhCCCcEEEEec
Q 019990 70 VATTDVVEACKDVNIAVMVG 89 (332)
Q Consensus 70 ~~~~~~~~a~~~aDiVi~~a 89 (332)
+...++ +++++||+||.+.
T Consensus 73 ~~~~~~-~~~~~aD~Vieav 91 (292)
T PRK07530 73 STATDL-EDLADCDLVIEAA 91 (292)
T ss_pred EeeCCH-HHhcCCCEEEEcC
Confidence 555665 5689999999874
No 311
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.76 E-value=0.00016 Score=65.08 Aligned_cols=160 Identities=19% Similarity=0.209 Sum_probs=88.4
Q ss_pred CCC-CCcEEEEEcCCC--hhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc---cCCccceEEeCC
Q 019990 1 MAK-NPLRVLVTGAAG--QIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA---FPLLKGVVATTD 74 (332)
Q Consensus 1 m~~-~~~kI~VtGaaG--~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~---~~~~~~v~~~~~ 74 (332)
|.+ +.+.++||||++ .||.+++..|++.|. .|++.+++. .+.....++.... ..+..|+....+
T Consensus 1 ~~~l~~k~~lITGas~~~GIG~aia~~la~~G~-------~vil~~r~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~ 70 (262)
T PRK07984 1 MGFLSGKRILVTGVASKLSIAYGIAQAMHREGA-------ELAFTYQND---KLKGRVEEFAAQLGSDIVLPCDVAEDAS 70 (262)
T ss_pred CcccCCCEEEEeCCCCCccHHHHHHHHHHHCCC-------EEEEEecch---hHHHHHHHHHhccCCceEeecCCCCHHH
Confidence 443 346799999874 799999999999885 788887642 2222222332110 112234544333
Q ss_pred HHHH-------hCCCcEEEEecCCCCCC--------CCChhH---HHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhh
Q 019990 75 VVEA-------CKDVNIAVMVGGFPRKE--------GMERKD---VMSKNVSIYKAQASALEKHAAPNCKVLVVANPANT 136 (332)
Q Consensus 75 ~~~a-------~~~aDiVi~~ag~~~~~--------~~~~~~---~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~ 136 (332)
+.+. +-..|++|+.||..... ..+.++ .+..|......+.+.+...-.+++.++++|+-...
T Consensus 71 v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~ 150 (262)
T PRK07984 71 IDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE 150 (262)
T ss_pred HHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCC
Confidence 3322 22479999999863211 112222 34556554444444433321133566666642210
Q ss_pred HHHHHHHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 137 NALILKEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 137 ~~~~~~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.+|-.-..+.+.++..+. +..||.
T Consensus 151 ---------~~~~~~~~Y~asKaal~~l~~~la~el~--~~gIrV 184 (262)
T PRK07984 151 ---------RAIPNYNVMGLAKASLEANVRYMANAMG--PEGVRV 184 (262)
T ss_pred ---------CCCCCcchhHHHHHHHHHHHHHHHHHhc--ccCcEE
Confidence 1223233578888888888888888764 456664
No 312
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=97.75 E-value=0.00014 Score=64.03 Aligned_cols=101 Identities=20% Similarity=0.196 Sum_probs=62.6
Q ss_pred EEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc-CCccceEEeCCHHHHhCCCcEEE
Q 019990 8 VLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF-PLLKGVVATTDVVEACKDVNIAV 86 (332)
Q Consensus 8 I~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~a~~~aDiVi 86 (332)
|+|+||+|.+|++++..|++.++ +|+++=++.+.+. ...+.+... ....++.....+.++++++|.||
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-------~V~~l~R~~~~~~----~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~ 69 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-------SVRALVRDPSSDR----AQQLQALGAEVVEADYDDPESLVAALKGVDAVF 69 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-------CEEEEESSSHHHH----HHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEE
T ss_pred CEEECCccHHHHHHHHHHHhCCC-------CcEEEEeccchhh----hhhhhcccceEeecccCCHHHHHHHHcCCceEE
Confidence 79999999999999999998665 6777766542211 122322211 11234444556788999999999
Q ss_pred EecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeC
Q 019990 87 MVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVAN 132 (332)
Q Consensus 87 ~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~sn 132 (332)
++-+... ..+ .+...++++++.+.+ ++.++.|.
T Consensus 70 ~~~~~~~---~~~-------~~~~~~li~Aa~~ag---Vk~~v~ss 102 (233)
T PF05368_consen 70 SVTPPSH---PSE-------LEQQKNLIDAAKAAG---VKHFVPSS 102 (233)
T ss_dssp EESSCSC---CCH-------HHHHHHHHHHHHHHT----SEEEESE
T ss_pred eecCcch---hhh-------hhhhhhHHHhhhccc---cceEEEEE
Confidence 8865432 111 344567888888875 44444553
No 313
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.73 E-value=0.00075 Score=60.62 Aligned_cols=157 Identities=13% Similarity=0.161 Sum_probs=84.0
Q ss_pred CcEEEEEcC--CChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh---ccCCccceEEeCCHHHH-
Q 019990 5 PLRVLVTGA--AGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA---AFPLLKGVVATTDVVEA- 78 (332)
Q Consensus 5 ~~kI~VtGa--aG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~---~~~~~~~v~~~~~~~~a- 78 (332)
.+.++|||| ++.||.+++..|++.|. +|++.++.. +......++... ...+..|+....++.+.
T Consensus 6 ~k~~lITGa~~~~GIG~a~a~~l~~~G~-------~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 75 (261)
T PRK08690 6 GKKILITGMISERSIAYGIAKACREQGA-------ELAFTYVVD---KLEERVRKMAAELDSELVFRCDVASDDEINQVF 75 (261)
T ss_pred CcEEEEECCCCCCcHHHHHHHHHHHCCC-------EEEEEcCcH---HHHHHHHHHHhccCCceEEECCCCCHHHHHHHH
Confidence 467999996 56899999999998885 777776532 111112222111 01122345443333322
Q ss_pred ------hCCCcEEEEecCCCCC-----C---CCChhH---HHhhhHHHHHHHHHHHHhhc-CCCcEEEEEeCChhhHHHH
Q 019990 79 ------CKDVNIAVMVGGFPRK-----E---GMERKD---VMSKNVSIYKAQASALEKHA-APNCKVLVVANPANTNALI 140 (332)
Q Consensus 79 ------~~~aDiVi~~ag~~~~-----~---~~~~~~---~~~~N~~~~~~i~~~i~~~~-~~~~~viv~snp~~~~~~~ 140 (332)
+...|++|+.||.... + ..+..+ .+..|+.....+.+.+...- ...+.++++|+....
T Consensus 76 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~---- 151 (261)
T PRK08690 76 ADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAV---- 151 (261)
T ss_pred HHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccc----
Confidence 2358999999987432 1 122222 23445544333333322210 112456666653221
Q ss_pred HHHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeee
Q 019990 141 LKEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNV 182 (332)
Q Consensus 141 ~~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~ 182 (332)
.+.|....|+.+|-.-..+.+.++..+. +..||..
T Consensus 152 -----~~~~~~~~Y~asKaal~~l~~~la~e~~--~~gIrVn 186 (261)
T PRK08690 152 -----RAIPNYNVMGMAKASLEAGIRFTAACLG--KEGIRCN 186 (261)
T ss_pred -----cCCCCcccchhHHHHHHHHHHHHHHHhh--hcCeEEE
Confidence 1223334678888877788777877654 4556643
No 314
>PRK07041 short chain dehydrogenase; Provisional
Probab=97.73 E-value=0.0001 Score=64.59 Aligned_cols=145 Identities=14% Similarity=0.073 Sum_probs=80.0
Q ss_pred EEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhh-hcc-CCccceEEeCCHHHHhC---CCc
Q 019990 9 LVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELID-AAF-PLLKGVVATTDVVEACK---DVN 83 (332)
Q Consensus 9 ~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~-~~~-~~~~~v~~~~~~~~a~~---~aD 83 (332)
+||||+|++|++++..|++.|. +|++++++. +.+.....++.. ... ....|+....++.++++ ..|
T Consensus 1 lItGas~~iG~~~a~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id 71 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGA-------RVTIASRSR--DRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFD 71 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCC
Confidence 4899999999999999999885 789998753 223222222211 001 11234444444444443 479
Q ss_pred EEEEecCCCCCC---CCC---hhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCcEEEee
Q 019990 84 IAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLT 157 (332)
Q Consensus 84 iVi~~ag~~~~~---~~~---~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~i~~~t 157 (332)
++||.+|..... ..+ -...+..|......+.+.... . +..++++++.-.. + .+.++...|+.+
T Consensus 72 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~-~~g~iv~~ss~~~---~------~~~~~~~~Y~~s 140 (230)
T PRK07041 72 HVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARI-A-PGGSLTFVSGFAA---V------RPSASGVLQGAI 140 (230)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhh-c-CCeEEEEECchhh---c------CCCCcchHHHHH
Confidence 999999863221 111 123456777777676663332 2 3346666553211 0 122333345666
Q ss_pred cccHHHHHHHHHHHcC
Q 019990 158 RLDHNRAMGQISERLK 173 (332)
Q Consensus 158 ~l~~~r~~~~~a~~~~ 173 (332)
+.....+.+.++..+.
T Consensus 141 K~a~~~~~~~la~e~~ 156 (230)
T PRK07041 141 NAALEALARGLALELA 156 (230)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 6655566556665543
No 315
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.71 E-value=0.00061 Score=61.15 Aligned_cols=156 Identities=11% Similarity=0.118 Sum_probs=88.0
Q ss_pred CcEEEEEcCCC--hhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh---ccCCccceEEeCCHHHH-
Q 019990 5 PLRVLVTGAAG--QIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA---AFPLLKGVVATTDVVEA- 78 (332)
Q Consensus 5 ~~kI~VtGaaG--~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~---~~~~~~~v~~~~~~~~a- 78 (332)
.+.++||||++ -||.+++..|++.|. +|.+.+++. .......++... ......|+....++.+.
T Consensus 8 ~k~~lITGas~~~GIG~a~a~~la~~G~-------~v~~~~r~~---~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~ 77 (260)
T PRK06603 8 GKKGLITGIANNMSISWAIAQLAKKHGA-------ELWFTYQSE---VLEKRVKPLAEEIGCNFVSELDVTNPKSISNLF 77 (260)
T ss_pred CcEEEEECCCCCcchHHHHHHHHHHcCC-------EEEEEeCch---HHHHHHHHHHHhcCCceEEEccCCCHHHHHHHH
Confidence 45789999886 699999999998875 788877642 111112223211 01112344443333322
Q ss_pred ------hCCCcEEEEecCCCCC-----C--CCChh---HHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHH
Q 019990 79 ------CKDVNIAVMVGGFPRK-----E--GMERK---DVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILK 142 (332)
Q Consensus 79 ------~~~aDiVi~~ag~~~~-----~--~~~~~---~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~ 142 (332)
+...|++|+.||.... + ..+.+ ..+..|......+.+.+...-...+++|++++....
T Consensus 78 ~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~------ 151 (260)
T PRK06603 78 DDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAE------ 151 (260)
T ss_pred HHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccc------
Confidence 3457999999886321 1 12222 234556655555555443322223567777753221
Q ss_pred HHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 143 EFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 143 ~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.+|.....+.+.++..+. +..|+.
T Consensus 152 ---~~~~~~~~Y~asKaal~~l~~~la~el~--~~gIrV 185 (260)
T PRK06603 152 ---KVIPNYNVMGVAKAALEASVKYLANDMG--ENNIRV 185 (260)
T ss_pred ---cCCCcccchhhHHHHHHHHHHHHHHHhh--hcCeEE
Confidence 1223334678888888888888888865 455664
No 316
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.70 E-value=0.00012 Score=67.99 Aligned_cols=73 Identities=26% Similarity=0.356 Sum_probs=50.3
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhc-ccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCC
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARG-IMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDV 82 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~-~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (332)
..++|+||||+|+||+.++..|... +. .++.+++++. +++.....++.. .++ .++.+++.++
T Consensus 154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv------~~lilv~R~~--~rl~~La~el~~------~~i---~~l~~~l~~a 216 (340)
T PRK14982 154 SKATVAVVGATGDIGSAVCRWLDAKTGV------AELLLVARQQ--ERLQELQAELGG------GKI---LSLEEALPEA 216 (340)
T ss_pred CCCEEEEEccChHHHHHHHHHHHhhCCC------CEEEEEcCCH--HHHHHHHHHhcc------ccH---HhHHHHHccC
Confidence 4578999999999999999999753 42 2788998743 233322222211 112 2466789999
Q ss_pred cEEEEecCCCC
Q 019990 83 NIAVMVGGFPR 93 (332)
Q Consensus 83 DiVi~~ag~~~ 93 (332)
|+||++++.+.
T Consensus 217 DiVv~~ts~~~ 227 (340)
T PRK14982 217 DIVVWVASMPK 227 (340)
T ss_pred CEEEECCcCCc
Confidence 99999998764
No 317
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.69 E-value=0.00065 Score=61.47 Aligned_cols=158 Identities=16% Similarity=0.149 Sum_probs=88.9
Q ss_pred CcEEEEEcCC--ChhHHHHHHHHHhcccCCCCCCeEEEEEecccc-hhhhhhhHhhhhhhccCCccceEEeCCHHHH---
Q 019990 5 PLRVLVTGAA--GQIGYALVPMIARGIMLGPDQPVILHMLDIEPA-AEALNGVKMELIDAAFPLLKGVVATTDVVEA--- 78 (332)
Q Consensus 5 ~~kI~VtGaa--G~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~-~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a--- 78 (332)
.++++||||+ +-||.+++..|++.|. +|++.+++.. .+.++....++.. ......|+....+..+.
T Consensus 10 ~k~~lItGas~~~GIG~aia~~la~~G~-------~V~l~~r~~~~~~~~~~l~~~~~~-~~~~~~Dl~~~~~v~~~~~~ 81 (272)
T PRK08159 10 GKRGLILGVANNRSIAWGIAKACRAAGA-------ELAFTYQGDALKKRVEPLAAELGA-FVAGHCDVTDEASIDAVFET 81 (272)
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCC-------EEEEEcCchHHHHHHHHHHHhcCC-ceEEecCCCCHHHHHHHHHH
Confidence 4679999986 7899999999999885 7888765321 1112111111111 01122344433333322
Q ss_pred ----hCCCcEEEEecCCCCC-----C--CCChh---HHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHH
Q 019990 79 ----CKDVNIAVMVGGFPRK-----E--GMERK---DVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEF 144 (332)
Q Consensus 79 ----~~~aDiVi~~ag~~~~-----~--~~~~~---~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~ 144 (332)
+...|++|+.||.... + ..+.+ ..+..|+.....+.+.+...-..++.++++++....
T Consensus 82 ~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~-------- 153 (272)
T PRK08159 82 LEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAE-------- 153 (272)
T ss_pred HHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccc--------
Confidence 2357999999987421 1 12222 245667766666666554432223566666642210
Q ss_pred CCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 145 APSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 145 ~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.|....|+.+|.....+.+.++..+. +..||.
T Consensus 154 -~~~p~~~~Y~asKaal~~l~~~la~el~--~~gIrV 187 (272)
T PRK08159 154 -KVMPHYNVMGVAKAALEASVKYLAVDLG--PKNIRV 187 (272)
T ss_pred -cCCCcchhhhhHHHHHHHHHHHHHHHhc--ccCeEE
Confidence 1233334678888888888888888765 455664
No 318
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=97.69 E-value=0.00085 Score=61.95 Aligned_cols=75 Identities=24% Similarity=0.281 Sum_probs=50.1
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhH----h---hhhhhcc-------CCccceE
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVK----M---ELIDAAF-------PLLKGVV 70 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~----~---dl~~~~~-------~~~~~v~ 70 (332)
++||+|+| +|.+|++++..|+..|+ +|+++|++.. .+.... . .+..... ....++.
T Consensus 2 ~~~V~VIG-~G~mG~~iA~~la~~G~-------~V~v~d~~~~--~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~ 71 (308)
T PRK06129 2 MGSVAIIG-AGLIGRAWAIVFARAGH-------EVRLWDADPA--AAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIR 71 (308)
T ss_pred CcEEEEEC-ccHHHHHHHHHHHHCCC-------eeEEEeCCHH--HHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeE
Confidence 35899999 79999999999999886 8999998642 222110 0 0111000 0113456
Q ss_pred EeCCHHHHhCCCcEEEEec
Q 019990 71 ATTDVVEACKDVNIAVMVG 89 (332)
Q Consensus 71 ~~~~~~~a~~~aDiVi~~a 89 (332)
...++.+++++||+|+.+.
T Consensus 72 ~~~~~~~a~~~ad~Vi~av 90 (308)
T PRK06129 72 VTDSLADAVADADYVQESA 90 (308)
T ss_pred EECcHHHhhCCCCEEEECC
Confidence 6678878889999998864
No 319
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=97.69 E-value=3.3e-05 Score=68.61 Aligned_cols=163 Identities=8% Similarity=0.002 Sum_probs=100.6
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhh-Hhhhhhhc---cC-CccceEEeCCHHHHh
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGV-KMELIDAA---FP-LLKGVVATTDVVEAC 79 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~-~~dl~~~~---~~-~~~~v~~~~~~~~a~ 79 (332)
++..+|||-+|+-|+.|+..|+++|+ +|+-+.++...-..... ...+.+.. +. ...++++...+..++
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY-------~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l 74 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGY-------EVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRIL 74 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCc-------EEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHH
Confidence 35678999999999999999999987 77777654321111110 00111111 11 135666666676666
Q ss_pred C--CCcEEEEecCCCC---CCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhH---HHHHHHHCCCCCCC
Q 019990 80 K--DVNIAVMVGGFPR---KEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTN---ALILKEFAPSIPAK 151 (332)
Q Consensus 80 ~--~aDiVi~~ag~~~---~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~---~~~~~~~~~~~~~~ 151 (332)
+ ..|-|.++|+... +...| ......+.-++..++++++..+.++.++..+|++ +.. -...+...+++-|+
T Consensus 75 ~~v~PdEIYNLaAQS~V~vSFe~P-~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStS-E~fG~v~~~pq~E~TPFyPr 152 (345)
T COG1089 75 EEVQPDEIYNLAAQSHVGVSFEQP-EYTADVDAIGTLRLLEAIRILGEKKTRFYQASTS-ELYGLVQEIPQKETTPFYPR 152 (345)
T ss_pred HhcCchhheeccccccccccccCc-ceeeeechhHHHHHHHHHHHhCCcccEEEecccH-HhhcCcccCccccCCCCCCC
Confidence 5 5689999987532 22222 2234556777899999999998447787777653 211 11122323557777
Q ss_pred cEEEeecccHHHHHHHHHHHcCCCC
Q 019990 152 NITCLTRLDHNRAMGQISERLKVHV 176 (332)
Q Consensus 152 ~i~~~t~l~~~r~~~~~a~~~~v~~ 176 (332)
.+|+.+++-...+..-+.+.+|+..
T Consensus 153 SPYAvAKlYa~W~tvNYResYgl~A 177 (345)
T COG1089 153 SPYAVAKLYAYWITVNYRESYGLFA 177 (345)
T ss_pred CHHHHHHHHHHheeeehHhhcCcee
Confidence 7888888876666666666777644
No 320
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.68 E-value=0.00039 Score=63.55 Aligned_cols=74 Identities=19% Similarity=0.332 Sum_probs=49.7
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHh---hhhhhc-----c------CCccceEE
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKM---ELIDAA-----F------PLLKGVVA 71 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~---dl~~~~-----~------~~~~~v~~ 71 (332)
+||+|+| +|.+|..++..|+..++ +|+++|++. +.++.... ++.... . ....+++.
T Consensus 2 ~~V~VIG-~G~mG~~iA~~la~~G~-------~V~~~d~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 71 (288)
T PRK09260 2 EKLVVVG-AGVMGRGIAYVFAVSGF-------QTTLVDIKQ--EQLESAQQEIASIFEQGVARGKLTEAARQAALARLSY 71 (288)
T ss_pred cEEEEEC-ccHHHHHHHHHHHhCCC-------cEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE
Confidence 5899999 69999999999998876 899999864 22322111 110000 0 01124556
Q ss_pred eCCHHHHhCCCcEEEEec
Q 019990 72 TTDVVEACKDVNIAVMVG 89 (332)
Q Consensus 72 ~~~~~~a~~~aDiVi~~a 89 (332)
..++.+++++||+||.+.
T Consensus 72 ~~~~~~~~~~aD~Vi~av 89 (288)
T PRK09260 72 SLDLKAAVADADLVIEAV 89 (288)
T ss_pred eCcHHHhhcCCCEEEEec
Confidence 677778899999999874
No 321
>PRK05599 hypothetical protein; Provisional
Probab=97.67 E-value=0.0011 Score=59.04 Aligned_cols=154 Identities=14% Similarity=0.177 Sum_probs=86.4
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc---c-CCccceEEeCCHHHH---
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA---F-PLLKGVVATTDVVEA--- 78 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~---~-~~~~~v~~~~~~~~a--- 78 (332)
|.++||||++.||.+++..|.+ +. +|.+.+++. +.++....++.... . ....|+....++.++
T Consensus 1 ~~vlItGas~GIG~aia~~l~~-g~-------~Vil~~r~~--~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 70 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLCH-GE-------DVVLAARRP--EAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQ 70 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHhC-CC-------EEEEEeCCH--HHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHH
Confidence 3589999999999999999984 53 788888753 34444444443211 0 112344433333222
Q ss_pred ----hCCCcEEEEecCCCCCC---CCChh---HHHhhhHHH----HHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHH
Q 019990 79 ----CKDVNIAVMVGGFPRKE---GMERK---DVMSKNVSI----YKAQASALEKHAAPNCKVLVVANPANTNALILKEF 144 (332)
Q Consensus 79 ----~~~aDiVi~~ag~~~~~---~~~~~---~~~~~N~~~----~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~ 144 (332)
+...|++|+.||..... ..+.. +....|... .+.+.+.+.+.. .++.++++|+....
T Consensus 71 ~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~~g~Iv~isS~~~~-------- 141 (246)
T PRK05599 71 TQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQT-APAAIVAFSSIAGW-------- 141 (246)
T ss_pred HHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcC-CCCEEEEEeccccc--------
Confidence 23579999999874221 11111 223334322 234445554432 23567777763321
Q ss_pred CCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 145 APSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 145 ~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.+|.....+...++..++ ...|+.
T Consensus 142 -~~~~~~~~Y~asKaa~~~~~~~la~el~--~~~I~v 175 (246)
T PRK05599 142 -RARRANYVYGSTKAGLDAFCQGLADSLH--GSHVRL 175 (246)
T ss_pred -cCCcCCcchhhHHHHHHHHHHHHHHHhc--CCCceE
Confidence 1123333678888877788888888764 345663
No 322
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=97.67 E-value=0.00048 Score=57.41 Aligned_cols=65 Identities=20% Similarity=0.359 Sum_probs=46.9
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcE
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNI 84 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDi 84 (332)
|+||+++| .|.+|+.++.+|+..++ +|..+|++. ++.+ ++.+. ......+..++++++|+
T Consensus 1 m~~Ig~IG-lG~mG~~~a~~L~~~g~-------~v~~~d~~~--~~~~----~~~~~------g~~~~~s~~e~~~~~dv 60 (163)
T PF03446_consen 1 MMKIGFIG-LGNMGSAMARNLAKAGY-------EVTVYDRSP--EKAE----ALAEA------GAEVADSPAEAAEQADV 60 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTT-------EEEEEESSH--HHHH----HHHHT------TEEEESSHHHHHHHBSE
T ss_pred CCEEEEEc-hHHHHHHHHHHHHhcCC-------eEEeeccch--hhhh----hhHHh------hhhhhhhhhhHhhcccc
Confidence 57999999 89999999999999886 899999853 2222 23221 25556778888999999
Q ss_pred EEEec
Q 019990 85 AVMVG 89 (332)
Q Consensus 85 Vi~~a 89 (332)
|+.+-
T Consensus 61 vi~~v 65 (163)
T PF03446_consen 61 VILCV 65 (163)
T ss_dssp EEE-S
T ss_pred eEeec
Confidence 99863
No 323
>PRK08303 short chain dehydrogenase; Provisional
Probab=97.65 E-value=0.00048 Score=63.48 Aligned_cols=160 Identities=12% Similarity=0.067 Sum_probs=87.0
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccc--------hhhhhhhHhhhhhhc---cCCccceEEeC
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPA--------AEALNGVKMELIDAA---FPLLKGVVATT 73 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~--------~~~~~~~~~dl~~~~---~~~~~~v~~~~ 73 (332)
.+.++||||++.||.+++..|++.|. +|++.+++.. .+.+......+.... .....|+....
T Consensus 8 ~k~~lITGgs~GIG~aia~~la~~G~-------~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~ 80 (305)
T PRK08303 8 GKVALVAGATRGAGRGIAVELGAAGA-------TVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPE 80 (305)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence 47899999999999999999998875 7888887521 112222222222111 11123444333
Q ss_pred CHHHH-------hCCCcEEEEec-CCCC-----CC--CCChh---HHHhhhHHHH----HHHHHHHHhhcCCCcEEEEEe
Q 019990 74 DVVEA-------CKDVNIAVMVG-GFPR-----KE--GMERK---DVMSKNVSIY----KAQASALEKHAAPNCKVLVVA 131 (332)
Q Consensus 74 ~~~~a-------~~~aDiVi~~a-g~~~-----~~--~~~~~---~~~~~N~~~~----~~i~~~i~~~~~~~~~viv~s 131 (332)
+..++ +...|++|+.| |... .+ ..+.. +.+..|+... +.++..+.+. ..+.||++|
T Consensus 81 ~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~--~~g~IV~is 158 (305)
T PRK08303 81 QVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRR--PGGLVVEIT 158 (305)
T ss_pred HHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhC--CCcEEEEEC
Confidence 33322 23579999998 7421 11 11212 2344555433 4444444432 235777777
Q ss_pred CChhhHHHHHHHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 132 NPANTNALILKEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 132 np~~~~~~~~~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
+...... . .+.+....|+.+|.....+.+.++..++ +..||.
T Consensus 159 S~~~~~~----~--~~~~~~~~Y~asKaal~~lt~~La~el~--~~gIrV 200 (305)
T PRK08303 159 DGTAEYN----A--THYRLSVFYDLAKTSVNRLAFSLAHELA--PHGATA 200 (305)
T ss_pred Ccccccc----C--cCCCCcchhHHHHHHHHHHHHHHHHHhh--hcCcEE
Confidence 5321100 0 1111223578888888888888888765 556774
No 324
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=97.65 E-value=0.00034 Score=62.48 Aligned_cols=156 Identities=15% Similarity=0.140 Sum_probs=84.4
Q ss_pred EEEEEcCCChhHHHHHHHHHh----cccCCCCCCeEEEEEecccchhhhhhhHhhhhhh----cc-CCccceEEeCCHHH
Q 019990 7 RVLVTGAAGQIGYALVPMIAR----GIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA----AF-PLLKGVVATTDVVE 77 (332)
Q Consensus 7 kI~VtGaaG~IGs~l~~~L~~----~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~----~~-~~~~~v~~~~~~~~ 77 (332)
.++||||++.||.+++..|++ .+. .|.+.+++. +.+.....++... .. ....|+....++.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~ 72 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGS-------VLVLSARND--EALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQ 72 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCc-------EEEEEEcCH--HHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHH
Confidence 478999999999999999986 453 788888753 3344333344321 01 11224433333322
Q ss_pred HhC-----------CCcEEEEecCCCCCC----C--CCh---hHHHhhhHHHHHHH----HHHHHhhcCCCcEEEEEeCC
Q 019990 78 ACK-----------DVNIAVMVGGFPRKE----G--MER---KDVMSKNVSIYKAQ----ASALEKHAAPNCKVLVVANP 133 (332)
Q Consensus 78 a~~-----------~aDiVi~~ag~~~~~----~--~~~---~~~~~~N~~~~~~i----~~~i~~~~~~~~~viv~snp 133 (332)
.++ +.|++|+.||..... . .+. ...+..|+.....+ ++.+++.....+.++++|+.
T Consensus 73 ~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~ 152 (256)
T TIGR01500 73 LLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSL 152 (256)
T ss_pred HHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCH
Confidence 221 125899999863211 1 111 23566676554444 44444321112466666653
Q ss_pred hhhHHHHHHHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeee
Q 019990 134 ANTNALILKEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNV 182 (332)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~ 182 (332)
... .+.+....|+.+|.....+.+.++..+. +..|+..
T Consensus 153 ~~~---------~~~~~~~~Y~asKaal~~l~~~la~e~~--~~~i~v~ 190 (256)
T TIGR01500 153 CAI---------QPFKGWALYCAGKAARDMLFQVLALEEK--NPNVRVL 190 (256)
T ss_pred HhC---------CCCCCchHHHHHHHHHHHHHHHHHHHhc--CCCeEEE
Confidence 211 1223223467778777788888887765 4557643
No 325
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=97.64 E-value=0.00084 Score=61.56 Aligned_cols=35 Identities=34% Similarity=0.490 Sum_probs=30.6
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEeccc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEP 46 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~ 46 (332)
+.+||+|+| +|.+|+.++..|+..|+ +|+++|.+.
T Consensus 3 ~~~~V~vIG-~G~mG~~iA~~l~~~G~-------~V~~~d~~~ 37 (295)
T PLN02545 3 EIKKVGVVG-AGQMGSGIAQLAAAAGM-------DVWLLDSDP 37 (295)
T ss_pred CcCEEEEEC-CCHHHHHHHHHHHhcCC-------eEEEEeCCH
Confidence 456899999 69999999999998875 899999864
No 326
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=97.63 E-value=0.0017 Score=61.91 Aligned_cols=115 Identities=17% Similarity=0.169 Sum_probs=63.9
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccC--------CccceEEeCCHHH
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFP--------LLKGVVATTDVVE 77 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~--------~~~~v~~~~~~~~ 77 (332)
|||+|+| +|.+|..++..|.. |+ +|+.+|++. +++...........-+ ....++.+.+..+
T Consensus 1 mkI~VIG-lGyvGl~~A~~lA~-G~-------~VigvD~d~--~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~ 69 (388)
T PRK15057 1 MKITISG-TGYVGLSNGLLIAQ-NH-------EVVALDILP--SRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNE 69 (388)
T ss_pred CEEEEEC-CCHHHHHHHHHHHh-CC-------cEEEEECCH--HHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhh
Confidence 4799999 79999999976654 65 899999864 2332111100000000 1123555555667
Q ss_pred HhCCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeC-ChhhH
Q 019990 78 ACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVAN-PANTN 137 (332)
Q Consensus 78 a~~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~sn-p~~~~ 137 (332)
+.++||+||.+...+...... ..+...++++++.+.+. +++..+|+-|. |....
T Consensus 70 ~~~~ad~vii~Vpt~~~~k~~-----~~dl~~v~~v~~~i~~~-~~g~lVV~~STv~pgtt 124 (388)
T PRK15057 70 AYRDADYVIIATPTDYDPKTN-----YFNTSSVESVIKDVVEI-NPYAVMVIKSTVPVGFT 124 (388)
T ss_pred hhcCCCEEEEeCCCCCccCCC-----CcChHHHHHHHHHHHhc-CCCCEEEEeeecCCchH
Confidence 789999999987654221111 11234445555555553 34544454443 55443
No 327
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.63 E-value=0.00067 Score=60.65 Aligned_cols=158 Identities=11% Similarity=0.084 Sum_probs=83.9
Q ss_pred CCcEEEEEcCCC--hhHHHHHHHHHhcccCCCCCCeEEEEEeccc---------chhhhhhhHhhhhhhcc---CCccce
Q 019990 4 NPLRVLVTGAAG--QIGYALVPMIARGIMLGPDQPVILHMLDIEP---------AAEALNGVKMELIDAAF---PLLKGV 69 (332)
Q Consensus 4 ~~~kI~VtGaaG--~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~---------~~~~~~~~~~dl~~~~~---~~~~~v 69 (332)
+.++|+||||+| .||++++..|++.|. ++++.++.. ..+.......++..... ....|+
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~-------~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~ 77 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGA-------DIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDL 77 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCC-------eEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCC
Confidence 357899999984 799999999999875 677664311 00111111122221110 112233
Q ss_pred EEeCCHHHH-------hCCCcEEEEecCCCCCC---CCChh---HHHhhhHHHHHH----HHHHHHhhcCCCcEEEEEeC
Q 019990 70 VATTDVVEA-------CKDVNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKA----QASALEKHAAPNCKVLVVAN 132 (332)
Q Consensus 70 ~~~~~~~~a-------~~~aDiVi~~ag~~~~~---~~~~~---~~~~~N~~~~~~----i~~~i~~~~~~~~~viv~sn 132 (332)
+...++.++ +-..|++|+.||..... ..+.+ ..++.|...... ++..+++. ..+++|++|+
T Consensus 78 ~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g~iv~isS 155 (256)
T PRK12859 78 TQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKK--SGGRIINMTS 155 (256)
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCeEEEEEcc
Confidence 333333222 23469999999864221 12222 235566654433 34444432 2457777775
Q ss_pred ChhhHHHHHHHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 133 PANTNALILKEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 133 p~~~~~~~~~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.... .+++....|+.++.....+.+.+++.++ +..|+.
T Consensus 156 ~~~~---------~~~~~~~~Y~~sK~a~~~l~~~la~~~~--~~~i~v 193 (256)
T PRK12859 156 GQFQ---------GPMVGELAYAATKGAIDALTSSLAAEVA--HLGITV 193 (256)
T ss_pred cccC---------CCCCCchHHHHHHHHHHHHHHHHHHHhh--hhCeEE
Confidence 3221 1233334567777777788777877754 344553
No 328
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=97.60 E-value=0.00076 Score=69.27 Aligned_cols=104 Identities=20% Similarity=0.223 Sum_probs=69.4
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhh---hHhh-hhhh----cc------CCccceE
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNG---VKME-LIDA----AF------PLLKGVV 70 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~---~~~d-l~~~----~~------~~~~~v~ 70 (332)
.+||+|+| +|.+|..++..++..|+ +|+|+|.+. +.+.. .... +... .. .....++
T Consensus 313 i~~v~ViG-aG~mG~gIA~~~a~~G~-------~V~l~d~~~--~~l~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~i~ 382 (715)
T PRK11730 313 VKQAAVLG-AGIMGGGIAYQSASKGV-------PVIMKDINQ--KALDLGMTEAAKLLNKQVERGKIDGAKMAGVLSSIR 382 (715)
T ss_pred cceEEEEC-CchhHHHHHHHHHhCCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeE
Confidence 36899999 69999999999999886 899999864 22221 1111 1110 00 0124677
Q ss_pred EeCCHHHHhCCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChh
Q 019990 71 ATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPAN 135 (332)
Q Consensus 71 ~~~~~~~a~~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~ 135 (332)
.++++ +++++||+||-+. -.+.+.-+++...+.++++|++ |++||.+.
T Consensus 383 ~~~~~-~~~~~aDlViEav--------------~E~l~~K~~vf~~l~~~~~~~~--ilasNTSs 430 (715)
T PRK11730 383 PTLDY-AGFERVDVVVEAV--------------VENPKVKAAVLAEVEQKVREDT--ILASNTST 430 (715)
T ss_pred EeCCH-HHhcCCCEEEecc--------------cCcHHHHHHHHHHHHhhCCCCc--EEEEcCCC
Confidence 67776 6789999998653 1135556788888989886664 56777544
No 329
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=97.59 E-value=0.00075 Score=69.29 Aligned_cols=104 Identities=19% Similarity=0.348 Sum_probs=69.7
Q ss_pred CcEEEEEcCCChhHHHHHHHHH-hcccCCCCCCeEEEEEecccchhhhhh---hHhhhhh-h----cc------CCccce
Q 019990 5 PLRVLVTGAAGQIGYALVPMIA-RGIMLGPDQPVILHMLDIEPAAEALNG---VKMELID-A----AF------PLLKGV 69 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~-~~~~~~~~~~~~i~l~D~~~~~~~~~~---~~~dl~~-~----~~------~~~~~v 69 (332)
-+||+|+| +|.+|+.++..++ ..|+ +|+++|.+. +.+.. ...+..+ . .. ....++
T Consensus 309 i~~v~ViG-aG~mG~giA~~~a~~~G~-------~V~l~d~~~--~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i 378 (708)
T PRK11154 309 VNKVGVLG-GGLMGGGIAYVTATKAGL-------PVRIKDINP--QGINHALKYSWDLLDKKVKRRHLKPSERDKQMALI 378 (708)
T ss_pred ccEEEEEC-CchhhHHHHHHHHHHcCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhcE
Confidence 46899999 6999999999988 6676 899999864 22221 1111111 0 00 012467
Q ss_pred EEeCCHHHHhCCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChh
Q 019990 70 VATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPAN 135 (332)
Q Consensus 70 ~~~~~~~~a~~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~ 135 (332)
+.++++ +++++||+||-+. -.|.+.-+++...+.++++|++ |++||...
T Consensus 379 ~~~~~~-~~~~~aDlViEav--------------~E~~~~K~~v~~~le~~~~~~~--ilasnTS~ 427 (708)
T PRK11154 379 SGTTDY-RGFKHADVVIEAV--------------FEDLALKQQMVAEVEQNCAPHT--IFASNTSS 427 (708)
T ss_pred EEeCCh-HHhccCCEEeecc--------------cccHHHHHHHHHHHHhhCCCCc--EEEECCCC
Confidence 777776 6789999999753 1235666788899999987765 55677544
No 330
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.
Probab=97.59 E-value=0.00087 Score=68.69 Aligned_cols=104 Identities=19% Similarity=0.318 Sum_probs=68.1
Q ss_pred CcEEEEEcCCChhHHHHHHHHH-hcccCCCCCCeEEEEEecccchhhhhhh---Hh-hhhhhc----c------CCccce
Q 019990 5 PLRVLVTGAAGQIGYALVPMIA-RGIMLGPDQPVILHMLDIEPAAEALNGV---KM-ELIDAA----F------PLLKGV 69 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~-~~~~~~~~~~~~i~l~D~~~~~~~~~~~---~~-dl~~~~----~------~~~~~v 69 (332)
.+||+|+| +|.+|+.++..++ ..|+ +|+++|.+. +.+..- .. .+.... . .....+
T Consensus 304 i~~v~ViG-aG~mG~~iA~~~a~~~G~-------~V~l~d~~~--~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i 373 (699)
T TIGR02440 304 IKKVGILG-GGLMGGGIASVTATKAGI-------PVRIKDINP--QGINNALKYAWKLLDKGVKRRHMTPAERDNQMALI 373 (699)
T ss_pred ccEEEEEC-CcHHHHHHHHHHHHHcCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHcCe
Confidence 46899999 6999999999887 4676 899999864 222211 11 111110 0 012456
Q ss_pred EEeCCHHHHhCCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChh
Q 019990 70 VATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPAN 135 (332)
Q Consensus 70 ~~~~~~~~a~~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~ 135 (332)
+.++++ +++++||+||-+. -.+.+.-+++...+.+++++++ |++||.+.
T Consensus 374 ~~~~~~-~~~~~adlViEav--------------~E~l~~K~~v~~~l~~~~~~~~--ilasnTS~ 422 (699)
T TIGR02440 374 TGTTDY-RGFKDVDIVIEAV--------------FEDLALKHQMVKDIEQECAAHT--IFASNTSS 422 (699)
T ss_pred EEeCCh-HHhccCCEEEEec--------------cccHHHHHHHHHHHHhhCCCCc--EEEeCCCC
Confidence 767776 6789999999753 1124556788888999886664 56777543
No 331
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=97.58 E-value=0.0011 Score=61.45 Aligned_cols=38 Identities=29% Similarity=0.336 Sum_probs=33.2
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEeccc
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEP 46 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~ 46 (332)
|++++|||+|+| +|.||+.++..|.+.++ ++.+++++.
T Consensus 1 ~~~~~m~I~IiG-~GaiG~~lA~~L~~~g~-------~V~~~~r~~ 38 (313)
T PRK06249 1 MDSETPRIGIIG-TGAIGGFYGAMLARAGF-------DVHFLLRSD 38 (313)
T ss_pred CCCcCcEEEEEC-CCHHHHHHHHHHHHCCC-------eEEEEEeCC
Confidence 788889999999 79999999999988775 788888753
No 332
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=97.58 E-value=0.00088 Score=61.54 Aligned_cols=103 Identities=15% Similarity=0.129 Sum_probs=58.3
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccC-Ccc----ceEEeCCHHHHhC
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFP-LLK----GVVATTDVVEACK 80 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~-~~~----~v~~~~~~~~a~~ 80 (332)
|||+|+| +|.+|+.++..|.+.+. +|.++++ . +..+... + ...... ... ......+..+..+
T Consensus 1 mkI~IiG-~G~iG~~~a~~L~~~g~-------~V~~~~r-~--~~~~~~~-~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (305)
T PRK12921 1 MRIAVVG-AGAVGGTFGGRLLEAGR-------DVTFLVR-P--KRAKALR-E-RGLVIRSDHGDAVVPGPVITDPEELTG 67 (305)
T ss_pred CeEEEEC-CCHHHHHHHHHHHHCCC-------ceEEEec-H--HHHHHHH-h-CCeEEEeCCCeEEecceeecCHHHccC
Confidence 4799999 69999999999998775 7899987 3 1222111 1 000000 000 1112334444458
Q ss_pred CCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhH
Q 019990 81 DVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTN 137 (332)
Q Consensus 81 ~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~ 137 (332)
++|+||++.-.. . +..+++.++.+-.++..++...|.++..
T Consensus 68 ~~d~vilavk~~-----~-----------~~~~~~~l~~~~~~~~~ii~~~nG~~~~ 108 (305)
T PRK12921 68 PFDLVILAVKAY-----Q-----------LDAAIPDLKPLVGEDTVIIPLQNGIGQL 108 (305)
T ss_pred CCCEEEEEeccc-----C-----------HHHHHHHHHhhcCCCCEEEEeeCCCChH
Confidence 899999874211 0 2233444444333455667778887543
No 333
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.58 E-value=0.0015 Score=58.57 Aligned_cols=158 Identities=15% Similarity=0.192 Sum_probs=86.5
Q ss_pred CcEEEEEcC--CChhHHHHHHHHHhcccCCCCCCeEEEEEeccc-chhhhhhhHhhhhhhccCCccceEEeCCHHHH---
Q 019990 5 PLRVLVTGA--AGQIGYALVPMIARGIMLGPDQPVILHMLDIEP-AAEALNGVKMELIDAAFPLLKGVVATTDVVEA--- 78 (332)
Q Consensus 5 ~~kI~VtGa--aG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~-~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a--- 78 (332)
.++++|||| ++-||.+++..|++.|. +|++.++.. ..+.+.....++.. ......|+....++.++
T Consensus 6 ~k~vlItGas~~~GIG~a~a~~l~~~G~-------~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Dv~d~~~v~~~~~~ 77 (260)
T PRK06997 6 GKRILITGLLSNRSIAYGIAKACKREGA-------ELAFTYVGDRFKDRITEFAAEFGS-DLVFPCDVASDEQIDALFAS 77 (260)
T ss_pred CcEEEEeCCCCCCcHHHHHHHHHHHCCC-------eEEEEccchHHHHHHHHHHHhcCC-cceeeccCCCHHHHHHHHHH
Confidence 467999996 56899999999999885 777776431 11222211111111 01122345443333322
Q ss_pred ----hCCCcEEEEecCCCCC-----C---CCChhH---HHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHH
Q 019990 79 ----CKDVNIAVMVGGFPRK-----E---GMERKD---VMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKE 143 (332)
Q Consensus 79 ----~~~aDiVi~~ag~~~~-----~---~~~~~~---~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~ 143 (332)
+...|++|+.||.... + ..+.++ .++.|....-.+.+.+..+-..++.++++++-...
T Consensus 78 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~------- 150 (260)
T PRK06997 78 LGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAE------- 150 (260)
T ss_pred HHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccc-------
Confidence 3458999999987421 1 122222 34567655544444444332223566666642211
Q ss_pred HCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 144 FAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 144 ~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.+.+....|+.+|-.-..+.+.++..+. +..||.
T Consensus 151 --~~~~~~~~Y~asKaal~~l~~~la~el~--~~gIrV 184 (260)
T PRK06997 151 --RVVPNYNTMGLAKASLEASVRYLAVSLG--PKGIRA 184 (260)
T ss_pred --cCCCCcchHHHHHHHHHHHHHHHHHHhc--ccCeEE
Confidence 1223233577888888888888888764 445663
No 334
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.57 E-value=0.0017 Score=55.34 Aligned_cols=121 Identities=20% Similarity=0.241 Sum_probs=74.0
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCC---HHH
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTD---VVE 77 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~---~~~ 77 (332)
|+.....|+||||+..||..|++.+.+.|- +|.+..++. +++........... ....|+.+... +.+
T Consensus 1 mk~tgnTiLITGG~sGIGl~lak~f~elgN-------~VIi~gR~e--~~L~e~~~~~p~~~-t~v~Dv~d~~~~~~lve 70 (245)
T COG3967 1 MKTTGNTILITGGASGIGLALAKRFLELGN-------TVIICGRNE--ERLAEAKAENPEIH-TEVCDVADRDSRRELVE 70 (245)
T ss_pred CcccCcEEEEeCCcchhhHHHHHHHHHhCC-------EEEEecCcH--HHHHHHHhcCcchh-eeeecccchhhHHHHHH
Confidence 777788999999999999999999998764 788888753 45544333322221 11234443332 222
Q ss_pred Hh----CCCcEEEEecCCCCCCCCC-----h---hHHHhhhH----HHHHHHHHHHHhhcCCCcEEEEEeCC
Q 019990 78 AC----KDVNIAVMVGGFPRKEGME-----R---KDVMSKNV----SIYKAQASALEKHAAPNCKVLVVANP 133 (332)
Q Consensus 78 a~----~~aDiVi~~ag~~~~~~~~-----~---~~~~~~N~----~~~~~i~~~i~~~~~~~~~viv~snp 133 (332)
.+ -+-+++|..||+.+..+.+ . .+.+..|. ..+..+++.+.+. |.+-+|.+|+-
T Consensus 71 wLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q--~~a~IInVSSG 140 (245)
T COG3967 71 WLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQ--PEATIINVSSG 140 (245)
T ss_pred HHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhC--CCceEEEeccc
Confidence 22 3579999999986542211 1 12233443 3445555666653 57788888864
No 335
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=97.57 E-value=0.00091 Score=68.63 Aligned_cols=105 Identities=21% Similarity=0.281 Sum_probs=69.7
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhh---hHhhhh-hhc----c------CCccce
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNG---VKMELI-DAA----F------PLLKGV 69 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~---~~~dl~-~~~----~------~~~~~v 69 (332)
+.+||+|+| +|.+|+.++..++..|+ +|+++|.+. +.+.. ...... ... . .....+
T Consensus 312 ~i~~v~ViG-aG~mG~gIA~~~a~~G~-------~V~l~d~~~--~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i 381 (714)
T TIGR02437 312 DVKQAAVLG-AGIMGGGIAYQSASKGT-------PIVMKDINQ--HSLDLGLTEAAKLLNKQVERGRITPAKMAGVLNGI 381 (714)
T ss_pred ccceEEEEC-CchHHHHHHHHHHhCCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCe
Confidence 346899999 69999999999999886 899999864 22221 111111 000 0 012456
Q ss_pred EEeCCHHHHhCCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChh
Q 019990 70 VATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPAN 135 (332)
Q Consensus 70 ~~~~~~~~a~~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~ 135 (332)
+.+.++ +++++||+||-+. -.+.+.-+++...+.+.++|++ |++||.+.
T Consensus 382 ~~~~~~-~~~~~aDlViEav--------------~E~l~~K~~vf~~l~~~~~~~~--ilasnTS~ 430 (714)
T TIGR02437 382 TPTLSY-AGFDNVDIVVEAV--------------VENPKVKAAVLAEVEQHVREDA--ILASNTST 430 (714)
T ss_pred EEeCCH-HHhcCCCEEEEcC--------------cccHHHHHHHHHHHHhhCCCCc--EEEECCCC
Confidence 666676 6789999999653 1135556788888889886665 56777544
No 336
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=97.56 E-value=0.0018 Score=59.19 Aligned_cols=74 Identities=19% Similarity=0.223 Sum_probs=47.6
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhh-------hhhhc--cC--------Ccc
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKME-------LIDAA--FP--------LLK 67 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~d-------l~~~~--~~--------~~~ 67 (332)
.+||+|+| +|.+|+.++..|+..|+ +|+++|.+. +.++..... +.... .. ...
T Consensus 3 i~~I~ViG-aG~mG~~iA~~la~~G~-------~V~l~d~~~--~~l~~~~~~i~~~~~~l~~~~~~g~~~~~~~~~~~~ 72 (291)
T PRK06035 3 IKVIGVVG-SGVMGQGIAQVFARTGY-------DVTIVDVSE--EILKNAMELIESGPYGLRNLVEKGKMSEDEAKAIMA 72 (291)
T ss_pred CcEEEEEC-ccHHHHHHHHHHHhcCC-------eEEEEeCCH--HHHHHHHHHHHhhhhhHHHHHHcCCCCHHHHHHHHh
Confidence 36899999 69999999999998886 899999864 222211111 11000 00 012
Q ss_pred ceEEeCCHHHHhCCCcEEEEec
Q 019990 68 GVVATTDVVEACKDVNIAVMVG 89 (332)
Q Consensus 68 ~v~~~~~~~~a~~~aDiVi~~a 89 (332)
.+...++. +++++||+||.+.
T Consensus 73 ~i~~~~~~-~~~~~aDlVieav 93 (291)
T PRK06035 73 RIRTSTSY-ESLSDADFIVEAV 93 (291)
T ss_pred CcEeeCCH-HHhCCCCEEEEcC
Confidence 34445555 6789999999874
No 337
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=97.53 E-value=0.0015 Score=64.52 Aligned_cols=75 Identities=17% Similarity=0.165 Sum_probs=49.3
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhh---Hhh-hhhhc--c--------CCccce
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGV---KME-LIDAA--F--------PLLKGV 69 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~---~~d-l~~~~--~--------~~~~~v 69 (332)
+.+||+|+| +|.+|+.++..|+..|+ +|+++|++. +.+... ..+ +.... . .....+
T Consensus 6 ~i~~V~VIG-aG~MG~gIA~~la~aG~-------~V~l~D~~~--e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i 75 (507)
T PRK08268 6 SIATVAVIG-AGAMGAGIAQVAAQAGH-------TVLLYDARA--GAAAAARDGIAARLAKLVEKGKLTAEQADAALARL 75 (507)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCe
Confidence 457899999 69999999999998886 899999864 233221 111 11000 0 011346
Q ss_pred EEeCCHHHHhCCCcEEEEec
Q 019990 70 VATTDVVEACKDVNIAVMVG 89 (332)
Q Consensus 70 ~~~~~~~~a~~~aDiVi~~a 89 (332)
+...++ +++++||+||-+.
T Consensus 76 ~~~~~~-~~~~~aDlViEav 94 (507)
T PRK08268 76 RPVEAL-ADLADCDLVVEAI 94 (507)
T ss_pred EEeCCH-HHhCCCCEEEEcC
Confidence 666666 4588999999763
No 338
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=97.52 E-value=0.0015 Score=64.26 Aligned_cols=75 Identities=17% Similarity=0.143 Sum_probs=49.9
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhh-------h---hhccCCccceEEeCC
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMEL-------I---DAAFPLLKGVVATTD 74 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl-------~---~~~~~~~~~v~~~~~ 74 (332)
.+||+|+| +|.+|+.++..|+..|+ +|+++|.+.. .+......+ . ........++....+
T Consensus 4 i~kIavIG-~G~MG~~iA~~la~~G~-------~V~v~D~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~ 73 (495)
T PRK07531 4 IMKAACIG-GGVIGGGWAARFLLAGI-------DVAVFDPHPE--AERIIGEVLANAERAYAMLTDAPLPPEGRLTFCAS 73 (495)
T ss_pred cCEEEEEC-cCHHHHHHHHHHHhCCC-------eEEEEeCCHH--HHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCC
Confidence 35899999 79999999999999886 8999998642 222111000 0 000001123556677
Q ss_pred HHHHhCCCcEEEEec
Q 019990 75 VVEACKDVNIAVMVG 89 (332)
Q Consensus 75 ~~~a~~~aDiVi~~a 89 (332)
+.+++++||+|+.+.
T Consensus 74 ~~ea~~~aD~Vieav 88 (495)
T PRK07531 74 LAEAVAGADWIQESV 88 (495)
T ss_pred HHHHhcCCCEEEEcC
Confidence 878899999999763
No 339
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=97.49 E-value=0.0012 Score=54.54 Aligned_cols=119 Identities=13% Similarity=0.072 Sum_probs=65.2
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchh-hhhhhHhhhhhhcc---CCccceEEeCCHHHHh--
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAE-ALNGVKMELIDAAF---PLLKGVVATTDVVEAC-- 79 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~-~~~~~~~dl~~~~~---~~~~~v~~~~~~~~a~-- 79 (332)
++++|+||+|+||.+++..|.+.+. ..+.+.+++.... .......++..... ....|+....++.+.+
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~------~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 74 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGA------RHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAA 74 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhC------CeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence 3689999999999999999988764 1466666542111 00010112211110 0112333222222222
Q ss_pred -----CCCcEEEEecCCCCCC---CCCh---hHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeC
Q 019990 80 -----KDVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEKHAAPNCKVLVVAN 132 (332)
Q Consensus 80 -----~~aDiVi~~ag~~~~~---~~~~---~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~sn 132 (332)
...|.|||.+|..... ..+. ...+..|+.....+.+.+.... + .+++++|+
T Consensus 75 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~ii~~ss 136 (180)
T smart00822 75 IPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLP-L-DFFVLFSS 136 (180)
T ss_pred HHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCC-c-ceEEEEcc
Confidence 2369999999863211 1111 2356778888888888886643 3 35566664
No 340
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=97.48 E-value=0.001 Score=68.46 Aligned_cols=104 Identities=16% Similarity=0.280 Sum_probs=69.1
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhh---hHhhh-hhhc----c------CCccceE
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNG---VKMEL-IDAA----F------PLLKGVV 70 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~---~~~dl-~~~~----~------~~~~~v~ 70 (332)
.+||+|+| +|.+|+.++..++..|+ +|+++|.+. +.+.. ...+. .... . .....++
T Consensus 335 i~~v~ViG-aG~MG~gIA~~~a~~G~-------~V~l~d~~~--~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~ 404 (737)
T TIGR02441 335 VKTLAVLG-AGLMGAGIAQVSVDKGL-------KTVLKDATP--AGLDRGQQQVFKGLNKKVKRKKITSLERDSILSNLT 404 (737)
T ss_pred ccEEEEEC-CCHhHHHHHHHHHhCCC-------cEEEecCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeE
Confidence 46899999 69999999999998886 899999864 22221 11111 1100 0 0124677
Q ss_pred EeCCHHHHhCCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChh
Q 019990 71 ATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPAN 135 (332)
Q Consensus 71 ~~~~~~~a~~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~ 135 (332)
.++++ +++++||+||-.. -.|.+.-+++...+.++++|++ |++||.+.
T Consensus 405 ~~~~~-~~~~~aDlViEAv--------------~E~l~~K~~vf~~l~~~~~~~~--ilasNTSs 452 (737)
T TIGR02441 405 PTLDY-SGFKNADMVIEAV--------------FEDLSLKHKVIKEVEAVVPPHC--IIASNTSA 452 (737)
T ss_pred EeCCH-HHhccCCeehhhc--------------cccHHHHHHHHHHHHhhCCCCc--EEEEcCCC
Confidence 66776 5789999998542 1235556788888999886665 55677543
No 341
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.46 E-value=0.0026 Score=57.30 Aligned_cols=160 Identities=17% Similarity=0.182 Sum_probs=93.5
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh--ccCCccceEEeCCH-------
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA--AFPLLKGVVATTDV------- 75 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~--~~~~~~~v~~~~~~------- 75 (332)
...|+||||++-+|..++..+++.+- .+++.|++.. -....+..+.+. ...+..|++..+++
T Consensus 38 g~~vLITGgg~GlGr~ialefa~rg~-------~~vl~Din~~--~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~V 108 (300)
T KOG1201|consen 38 GEIVLITGGGSGLGRLIALEFAKRGA-------KLVLWDINKQ--GNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKV 108 (300)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHhCC-------eEEEEecccc--chHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHH
Confidence 45799999999999999999998874 7999999752 222233333332 11122344433333
Q ss_pred HHHhCCCcEEEEecCCCC-CC--CCChhH---HHhhhH----HHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHC
Q 019990 76 VEACKDVNIAVMVGGFPR-KE--GMERKD---VMSKNV----SIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFA 145 (332)
Q Consensus 76 ~~a~~~aDiVi~~ag~~~-~~--~~~~~~---~~~~N~----~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~ 145 (332)
++...+.|++|.-||+.. ++ ..++++ .++.|+ ..+++.+..+.+.. ++.+|.+++-...
T Consensus 109 k~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~--~GHIV~IaS~aG~--------- 177 (300)
T KOG1201|consen 109 KKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN--NGHIVTIASVAGL--------- 177 (300)
T ss_pred HHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC--CceEEEehhhhcc---------
Confidence 334557899999999732 22 233322 344554 44578888888763 5666655543221
Q ss_pred CCCCCCcEEEeecccHHHHHHHHHHHcC-CCCCCeeeeEE
Q 019990 146 PSIPAKNITCLTRLDHNRAMGQISERLK-VHVSDVKNVII 184 (332)
Q Consensus 146 ~~~~~~~i~~~t~l~~~r~~~~~a~~~~-v~~~~v~~~~V 184 (332)
.+.+.--.|+.||-...-+...+...+. .++..|+...|
T Consensus 178 ~g~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv 217 (300)
T KOG1201|consen 178 FGPAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLV 217 (300)
T ss_pred cCCccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEE
Confidence 1122112456677766666666665544 35555765543
No 342
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=97.45 E-value=0.0028 Score=58.73 Aligned_cols=75 Identities=25% Similarity=0.345 Sum_probs=48.5
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc----cCCccceEEeCCHHHHhC
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA----FPLLKGVVATTDVVEACK 80 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~----~~~~~~v~~~~~~~~a~~ 80 (332)
||||+|+| +|.+|+.++..|...++ ++.++|++. +.++....+..+.. ......+....+..++++
T Consensus 1 mmkI~iiG-~G~mG~~~a~~L~~~g~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (325)
T PRK00094 1 MMKIAVLG-AGSWGTALAIVLARNGH-------DVTLWARDP--EQAAEINADRENPRYLPGIKLPDNLRATTDLAEALA 70 (325)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCC-------EEEEEECCH--HHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHh
Confidence 46899999 69999999999998775 799999853 22222111100000 001113444566767788
Q ss_pred CCcEEEEec
Q 019990 81 DVNIAVMVG 89 (332)
Q Consensus 81 ~aDiVi~~a 89 (332)
++|+||++.
T Consensus 71 ~~D~vi~~v 79 (325)
T PRK00094 71 DADLILVAV 79 (325)
T ss_pred CCCEEEEeC
Confidence 999999874
No 343
>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional
Probab=97.45 E-value=0.0039 Score=60.16 Aligned_cols=76 Identities=16% Similarity=0.263 Sum_probs=51.7
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCC----------ccceEEe
Q 019990 3 KNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPL----------LKGVVAT 72 (332)
Q Consensus 3 ~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~----------~~~v~~~ 72 (332)
..+|||+|+| .|++|..++..|.. ++ +|+.+|++. ++. ..+.....+. ...+..+
T Consensus 4 ~~~mkI~vIG-lGyvGlpmA~~la~-~~-------~V~g~D~~~--~~v----e~l~~G~~~~~e~~~~~l~~~g~l~~t 68 (425)
T PRK15182 4 IDEVKIAIIG-LGYVGLPLAVEFGK-SR-------QVVGFDVNK--KRI----LELKNGVDVNLETTEEELREARYLKFT 68 (425)
T ss_pred CCCCeEEEEC-cCcchHHHHHHHhc-CC-------EEEEEeCCH--HHH----HHHHCcCCCCCCCCHHHHHhhCCeeEE
Confidence 4679999999 89999999999776 44 899999864 222 2333211110 1234444
Q ss_pred CCHHHHhCCCcEEEEecCCCCC
Q 019990 73 TDVVEACKDVNIAVMVGGFPRK 94 (332)
Q Consensus 73 ~~~~~a~~~aDiVi~~ag~~~~ 94 (332)
++. +++++||++|++.+.|..
T Consensus 69 ~~~-~~~~~advvii~Vptp~~ 89 (425)
T PRK15182 69 SEI-EKIKECNFYIITVPTPIN 89 (425)
T ss_pred eCH-HHHcCCCEEEEEcCCCCC
Confidence 444 568999999999887753
No 344
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=97.44 E-value=0.0037 Score=60.19 Aligned_cols=107 Identities=17% Similarity=0.145 Sum_probs=63.5
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCC--------------ccceE
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPL--------------LKGVV 70 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~--------------~~~v~ 70 (332)
++||+|+| .|.+|..++..|++.|+ +|..+|+++ +++.. +.....+. .+.+.
T Consensus 3 ~~kI~VIG-lG~~G~~~A~~La~~G~-------~V~~~D~~~--~~v~~----l~~g~~~~~e~~l~~~l~~~~~~g~l~ 68 (415)
T PRK11064 3 FETISVIG-LGYIGLPTAAAFASRQK-------QVIGVDINQ--HAVDT----INRGEIHIVEPDLDMVVKTAVEGGYLR 68 (415)
T ss_pred ccEEEEEC-cchhhHHHHHHHHhCCC-------EEEEEeCCH--HHHHH----HHCCCCCcCCCCHHHHHHHHhhcCcee
Confidence 57999999 79999999999999886 899999864 23322 11111100 11222
Q ss_pred EeCCHHHHhCCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeC-Chh
Q 019990 71 ATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVAN-PAN 135 (332)
Q Consensus 71 ~~~~~~~a~~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~sn-p~~ 135 (332)
..++ .++||+||++...|..... ..++..+...++.+.++.+++..+|+.|. |..
T Consensus 69 ~~~~----~~~aDvvii~vptp~~~~~------~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~pg 124 (415)
T PRK11064 69 ATTT----PEPADAFLIAVPTPFKGDH------EPDLTYVEAAAKSIAPVLKKGDLVILESTSPVG 124 (415)
T ss_pred eecc----cccCCEEEEEcCCCCCCCC------CcChHHHHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence 2222 3589999999877643211 11244455555666665434545555443 443
No 345
>PRK06720 hypothetical protein; Provisional
Probab=97.44 E-value=0.0014 Score=54.97 Aligned_cols=81 Identities=16% Similarity=0.137 Sum_probs=49.5
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHH---
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVE--- 77 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~--- 77 (332)
+.+.++||||+|.||..++..|.+.|. ++.+.|++. +.+.....++.... . .+..|+....+..+
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-------~V~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~ 85 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-------KVIVTDIDQ--ESGQATVEEITNLGGEALFVSYDMEKQGDWQRVIS 85 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence 457899999999999999999998875 899999753 22222222332111 0 11123332222222
Q ss_pred ----HhCCCcEEEEecCCCC
Q 019990 78 ----ACKDVNIAVMVGGFPR 93 (332)
Q Consensus 78 ----a~~~aDiVi~~ag~~~ 93 (332)
.+...|++|+.||...
T Consensus 86 ~~~~~~G~iDilVnnAG~~~ 105 (169)
T PRK06720 86 ITLNAFSRIDMLFQNAGLYK 105 (169)
T ss_pred HHHHHcCCCCEEEECCCcCC
Confidence 2346899999998743
No 346
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=97.43 E-value=0.00046 Score=59.61 Aligned_cols=161 Identities=16% Similarity=0.144 Sum_probs=91.7
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc-----CCccceEEeCCH
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF-----PLLKGVVATTDV 75 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~-----~~~~~v~~~~~~ 75 (332)
|..+.+.+++||++|-||..++..|++.+.. .+.+.|+. |+.+ ....|+.... ....|+....++
T Consensus 1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik------~~~i~~~~---En~~-a~akL~ai~p~~~v~F~~~DVt~~~~~ 70 (261)
T KOG4169|consen 1 MDLTGKNALVTGGAGGIGLATSKALLEKGIK------VLVIDDSE---ENPE-AIAKLQAINPSVSVIFIKCDVTNRGDL 70 (261)
T ss_pred CcccCceEEEecCCchhhHHHHHHHHHcCch------heeehhhh---hCHH-HHHHHhccCCCceEEEEEeccccHHHH
Confidence 5566788999999999999999999999872 33444432 2332 2233443321 112466655566
Q ss_pred HHHhC-------CCcEEEEecCCCCCCCCChhHHHhhhHHHH----HHHHHHHHhh-cCCCcEEEEEeCChhhHHHHHHH
Q 019990 76 VEACK-------DVNIAVMVGGFPRKEGMERKDVMSKNVSIY----KAQASALEKH-AAPNCKVLVVANPANTNALILKE 143 (332)
Q Consensus 76 ~~a~~-------~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~----~~i~~~i~~~-~~~~~~viv~snp~~~~~~~~~~ 143 (332)
+++++ ..|++|.-||+.....- +..+..|+.++ ...++.+.+- +.+.+.+|+.|+-.... +
T Consensus 71 ~~~f~ki~~~fg~iDIlINgAGi~~dkd~--e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~-P---- 143 (261)
T KOG4169|consen 71 EAAFDKILATFGTIDILINGAGILDDKDW--ERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLD-P---- 143 (261)
T ss_pred HHHHHHHHHHhCceEEEEcccccccchhH--HHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccC-c----
Confidence 66544 57999999998653222 22345555443 4445555443 23567888888533211 0
Q ss_pred HCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCeeee
Q 019990 144 FAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNV 182 (332)
Q Consensus 144 ~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~~~ 182 (332)
.|...+|+.++..-.-|-+.+|.......+.|+..
T Consensus 144 ----~p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~ 178 (261)
T KOG4169|consen 144 ----MPVFPVYAASKAGVVGFTRSLADLAYYQRSGVRFN 178 (261)
T ss_pred ----cccchhhhhcccceeeeehhhhhhhhHhhcCEEEE
Confidence 11112344444444444445666666666778754
No 347
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=97.42 E-value=0.0023 Score=59.86 Aligned_cols=76 Identities=20% Similarity=0.189 Sum_probs=45.4
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc----cCCccceEEeCCHHHHhC
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA----FPLLKGVVATTDVVEACK 80 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~----~~~~~~v~~~~~~~~a~~ 80 (332)
||||+|+| +|.+|+.++..|.+.|+ +|.++|++...+.+........+.. .....++....+. ++++
T Consensus 2 ~mkI~IiG-~G~mG~~~A~~L~~~G~-------~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 72 (341)
T PRK08229 2 MARICVLG-AGSIGCYLGGRLAAAGA-------DVTLIGRARIGDELRAHGLTLTDYRGRDVRVPPSAIAFSTDP-AALA 72 (341)
T ss_pred CceEEEEC-CCHHHHHHHHHHHhcCC-------cEEEEecHHHHHHHHhcCceeecCCCcceecccceeEeccCh-hhcc
Confidence 46899999 79999999999998875 7999997421111110000000000 0001123334444 5678
Q ss_pred CCcEEEEec
Q 019990 81 DVNIAVMVG 89 (332)
Q Consensus 81 ~aDiVi~~a 89 (332)
++|+||++.
T Consensus 73 ~~D~vil~v 81 (341)
T PRK08229 73 TADLVLVTV 81 (341)
T ss_pred CCCEEEEEe
Confidence 999999975
No 348
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=97.41 E-value=0.0023 Score=63.04 Aligned_cols=104 Identities=26% Similarity=0.342 Sum_probs=63.5
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHh----hhhhhc----c------CCccce
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKM----ELIDAA----F------PLLKGV 69 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~----dl~~~~----~------~~~~~v 69 (332)
+-+||+|+| +|.+|+.++..|+..|+ +|+++|++. +.+..... .+.... . .....+
T Consensus 4 ~~~kV~VIG-aG~MG~gIA~~la~aG~-------~V~l~d~~~--e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i 73 (503)
T TIGR02279 4 NVVTVAVIG-AGAMGAGIAQVAASAGH-------QVLLYDIRA--EALARAIAGIEARLNSLVTKGKLTAEECERTLKRL 73 (503)
T ss_pred CccEEEEEC-cCHHHHHHHHHHHhCCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhcc
Confidence 456899999 69999999999999886 899999864 23321111 111110 0 012346
Q ss_pred EEeCCHHHHhCCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCCh
Q 019990 70 VATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPA 134 (332)
Q Consensus 70 ~~~~~~~~a~~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~ 134 (332)
+..+++ +++++||+||.+.- + +...-+.+...+.+++++++ |++||.+
T Consensus 74 ~~~~~~-~~l~~aDlVIEav~-------E-------~~~vK~~vf~~l~~~~~~~~--IlasnTS 121 (503)
T TIGR02279 74 IPVTDL-HALADAGLVIEAIV-------E-------NLEVKKALFAQLEELCPADT--IIASNTS 121 (503)
T ss_pred EEeCCH-HHhCCCCEEEEcCc-------C-------cHHHHHHHHHHHHhhCCCCe--EEEECCC
Confidence 666676 56889999998631 0 12223344455777774554 4566544
No 349
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=97.41 E-value=0.002 Score=48.40 Aligned_cols=67 Identities=24% Similarity=0.337 Sum_probs=44.0
Q ss_pred EEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEE-ecccchhhhhhhHhhhhhhccCCccceEEeC-CHHHHhCCCcE
Q 019990 7 RVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHML-DIEPAAEALNGVKMELIDAAFPLLKGVVATT-DVVEACKDVNI 84 (332)
Q Consensus 7 kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~-D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~-~~~~a~~~aDi 84 (332)
||+|+| +|.+|++++..|++.+. . +.++.++ ++++ +++.....++. +.... +..++++++|+
T Consensus 1 kI~iIG-~G~mg~al~~~l~~~g~-~---~~~v~~~~~r~~--~~~~~~~~~~~---------~~~~~~~~~~~~~~adv 64 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLLASGI-K---PHEVIIVSSRSP--EKAAELAKEYG---------VQATADDNEEAAQEADV 64 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHHHTTS-----GGEEEEEEESSH--HHHHHHHHHCT---------TEEESEEHHHHHHHTSE
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCC-C---ceeEEeeccCcH--HHHHHHHHhhc---------cccccCChHHhhccCCE
Confidence 799999 79999999999998874 1 2378855 7753 23332222111 12222 56788899999
Q ss_pred EEEec
Q 019990 85 AVMVG 89 (332)
Q Consensus 85 Vi~~a 89 (332)
||++.
T Consensus 65 vilav 69 (96)
T PF03807_consen 65 VILAV 69 (96)
T ss_dssp EEE-S
T ss_pred EEEEE
Confidence 99974
No 350
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=97.39 E-value=0.00048 Score=54.42 Aligned_cols=74 Identities=16% Similarity=0.241 Sum_probs=41.2
Q ss_pred EEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcEEE
Q 019990 7 RVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAV 86 (332)
Q Consensus 7 kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDiVi 86 (332)
||+|+||+|++|+.++..|.+...+ ..+.+++.... .|....-.........++.......+.+.++|+||
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~-----e~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf 71 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDF-----ELVALVSSSRS----AGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVF 71 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTE-----EEEEEEESTTT----TTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCc-----cEEEeeeeccc----cCCeeehhccccccccceeEeecchhHhhcCCEEE
Confidence 7999999999999999999885432 13455555321 11111111000011123333332345679999999
Q ss_pred Eec
Q 019990 87 MVG 89 (332)
Q Consensus 87 ~~a 89 (332)
.+.
T Consensus 72 ~a~ 74 (121)
T PF01118_consen 72 LAL 74 (121)
T ss_dssp E-S
T ss_pred ecC
Confidence 874
No 351
>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.38 E-value=0.0033 Score=58.87 Aligned_cols=106 Identities=21% Similarity=0.178 Sum_probs=63.7
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhh---hhh--ccCCccceEEeCCHHH
Q 019990 3 KNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMEL---IDA--AFPLLKGVVATTDVVE 77 (332)
Q Consensus 3 ~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl---~~~--~~~~~~~v~~~~~~~~ 77 (332)
+.+|||+|+| +|.+|+.++..|.+.+ .++++..++ +..+....+- ... ......++..+.+..+
T Consensus 5 ~~~mkI~IiG-aGa~G~alA~~La~~g--------~v~l~~~~~--~~~~~i~~~~~~~~~l~~~~~l~~~i~~t~d~~~ 73 (341)
T PRK12439 5 KREPKVVVLG-GGSWGTTVASICARRG--------PTLQWVRSA--ETADDINDNHRNSRYLGNDVVLSDTLRATTDFAE 73 (341)
T ss_pred cCCCeEEEEC-CCHHHHHHHHHHHHCC--------CEEEEeCCH--HHHHHHHhcCCCcccCCCCcccCCCeEEECCHHH
Confidence 5678999999 6999999999998765 245565532 1221111100 000 0111234566678878
Q ss_pred HhCCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChh
Q 019990 78 ACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPAN 135 (332)
Q Consensus 78 a~~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~ 135 (332)
+++++|+||++.- ...++.+++.++.+-.++..++.++|.++
T Consensus 74 a~~~aDlVilavp----------------s~~~~~vl~~i~~~l~~~~~vIsl~kGi~ 115 (341)
T PRK12439 74 AANCADVVVMGVP----------------SHGFRGVLTELAKELRPWVPVVSLVKGLE 115 (341)
T ss_pred HHhcCCEEEEEeC----------------HHHHHHHHHHHHhhcCCCCEEEEEEeCCc
Confidence 8999999998731 12244556666655435556777777654
No 352
>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+)). Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.
Probab=97.35 E-value=0.0032 Score=58.85 Aligned_cols=79 Identities=29% Similarity=0.382 Sum_probs=49.3
Q ss_pred EEEEEcCCChhHHHHHHHHHhcccCCCCC-CeEEEEEeccc---chhhhhhhHhhhhhhcc------CCccceEEeCCHH
Q 019990 7 RVLVTGAAGQIGYALVPMIARGIMLGPDQ-PVILHMLDIEP---AAEALNGVKMELIDAAF------PLLKGVVATTDVV 76 (332)
Q Consensus 7 kI~VtGaaG~IGs~l~~~L~~~~~~~~~~-~~~i~l~D~~~---~~~~~~~~~~dl~~~~~------~~~~~v~~~~~~~ 76 (332)
||+|+| +|.-|++++..|..++...... ..+|.++.+++ .. .+.. ..+-.+.+. .+..++..+.++.
T Consensus 1 kI~VIG-aG~wGtALA~~la~ng~~~~~~~~~~V~lw~~~~~~~~~-~~~~-~in~~~~n~~ylpgi~Lp~~i~at~dl~ 77 (342)
T TIGR03376 1 RVAVVG-SGNWGTAIAKIVAENARALPELFEESVRMWVFEEEIEGR-NLTE-IINTTHENVKYLPGIKLPANLVAVPDLV 77 (342)
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCCcccccCCceEEEEEeccccCCH-HHHH-HHHhcCCCccccCCCcCCCCeEEECCHH
Confidence 699999 6999999999998866211100 02899998632 11 1111 111112111 1234677778998
Q ss_pred HHhCCCcEEEEe
Q 019990 77 EACKDVNIAVMV 88 (332)
Q Consensus 77 ~a~~~aDiVi~~ 88 (332)
++++++|+||+.
T Consensus 78 eal~~ADiIIlA 89 (342)
T TIGR03376 78 EAAKGADILVFV 89 (342)
T ss_pred HHHhcCCEEEEE
Confidence 999999998886
No 353
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=97.35 E-value=0.004 Score=57.04 Aligned_cols=105 Identities=16% Similarity=0.184 Sum_probs=58.0
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh-ccCCccceEEeCCHHHHhCCCcE
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA-AFPLLKGVVATTDVVEACKDVNI 84 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~-~~~~~~~v~~~~~~~~a~~~aDi 84 (332)
|||+|+| +|.+|+.++..|.+.|. +|.+++++. +.......+-... .......+....+..+ .+++|+
T Consensus 1 m~I~IiG-~G~~G~~~a~~L~~~g~-------~V~~~~r~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~d~ 69 (304)
T PRK06522 1 MKIAILG-AGAIGGLFGAALAQAGH-------DVTLVARRG--AHLDALNENGLRLEDGEITVPVLAADDPAE-LGPQDL 69 (304)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCC-------eEEEEECCh--HHHHHHHHcCCcccCCceeecccCCCChhH-cCCCCE
Confidence 4799999 69999999999998775 899999743 2222111100000 0000001111233433 488999
Q ss_pred EEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhH
Q 019990 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTN 137 (332)
Q Consensus 85 Vi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~ 137 (332)
||++.-.. . +..+++.+..+-.++..++...|.++..
T Consensus 70 vila~k~~-----~-----------~~~~~~~l~~~l~~~~~iv~~~nG~~~~ 106 (304)
T PRK06522 70 VILAVKAY-----Q-----------LPAALPSLAPLLGPDTPVLFLQNGVGHL 106 (304)
T ss_pred EEEecccc-----c-----------HHHHHHHHhhhcCCCCEEEEecCCCCcH
Confidence 99874211 0 1233444444332455677788876543
No 354
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=97.35 E-value=0.00099 Score=61.61 Aligned_cols=119 Identities=11% Similarity=0.037 Sum_probs=66.4
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcc-cCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--cC-CccceEEeCCHHHH--
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGI-MLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--FP-LLKGVVATTDVVEA-- 78 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~-~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~~-~~~~v~~~~~~~~a-- 78 (332)
.+.++||||++.||.+++..|++.| . +|++.+++. +.......++.... .. ...|++...+..++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~-------~V~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~ 73 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEW-------HVIMACRDF--LKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQ 73 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCC-------EEEEEeCCH--HHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHH
Confidence 3478999999999999999999887 5 788888753 22322222222110 00 11233333222222
Q ss_pred -----hCCCcEEEEecCCCCC----CCCChh---HHHhhhHHHH----HHHHHHHHhhcCCCcEEEEEeC
Q 019990 79 -----CKDVNIAVMVGGFPRK----EGMERK---DVMSKNVSIY----KAQASALEKHAAPNCKVLVVAN 132 (332)
Q Consensus 79 -----~~~aDiVi~~ag~~~~----~~~~~~---~~~~~N~~~~----~~i~~~i~~~~~~~~~viv~sn 132 (332)
+...|++|+.||.... +..+.+ ..+..|.... +.+++.+++.+...++||++|+
T Consensus 74 ~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS 143 (314)
T TIGR01289 74 QFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGS 143 (314)
T ss_pred HHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEec
Confidence 2358999999987321 112222 2456676554 4445555543211257777765
No 355
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=97.32 E-value=0.0032 Score=54.07 Aligned_cols=68 Identities=18% Similarity=0.166 Sum_probs=46.3
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcE
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNI 84 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDi 84 (332)
||+++|+| +|.||+.|+.+|...++ +|.+-..+.. +.+......+. ..++. ....+|.+.+|+
T Consensus 1 m~~~~i~G-tGniG~alA~~~a~ag~-------eV~igs~r~~-~~~~a~a~~l~-------~~i~~-~~~~dA~~~aDV 63 (211)
T COG2085 1 MMIIAIIG-TGNIGSALALRLAKAGH-------EVIIGSSRGP-KALAAAAAALG-------PLITG-GSNEDAAALADV 63 (211)
T ss_pred CcEEEEec-cChHHHHHHHHHHhCCC-------eEEEecCCCh-hHHHHHHHhhc-------ccccc-CChHHHHhcCCE
Confidence 57888888 89999999999999886 7777755432 22332222221 11332 356788999999
Q ss_pred EEEec
Q 019990 85 AVMVG 89 (332)
Q Consensus 85 Vi~~a 89 (332)
||.+.
T Consensus 64 VvLAV 68 (211)
T COG2085 64 VVLAV 68 (211)
T ss_pred EEEec
Confidence 99873
No 356
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.28 E-value=0.0018 Score=60.35 Aligned_cols=76 Identities=26% Similarity=0.271 Sum_probs=49.8
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh----ccCCccceEEeCCHHHHh
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA----AFPLLKGVVATTDVVEAC 79 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~----~~~~~~~v~~~~~~~~a~ 79 (332)
.+|||+|+| +|.+|+.++..|...++ +|++++++. +..+......... ......++....++.+++
T Consensus 3 ~~m~I~iIG-~G~mG~~ia~~L~~~G~-------~V~~~~r~~--~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~ 72 (328)
T PRK14618 3 HGMRVAVLG-AGAWGTALAVLAASKGV-------PVRLWARRP--EFAAALAAERENREYLPGVALPAELYPTADPEEAL 72 (328)
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH
Confidence 467999999 79999999999998876 899999853 2222111100000 011112245556777778
Q ss_pred CCCcEEEEec
Q 019990 80 KDVNIAVMVG 89 (332)
Q Consensus 80 ~~aDiVi~~a 89 (332)
+++|+||.+.
T Consensus 73 ~~aD~Vi~~v 82 (328)
T PRK14618 73 AGADFAVVAV 82 (328)
T ss_pred cCCCEEEEEC
Confidence 9999998874
No 357
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=97.19 E-value=0.00056 Score=59.26 Aligned_cols=181 Identities=17% Similarity=0.169 Sum_probs=105.6
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCC-ccceEEeCCHHHHhC--
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPL-LKGVVATTDVVEACK-- 80 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~-~~~v~~~~~~~~a~~-- 80 (332)
++.||+||||-|..|.-++..|...- |. ..+.|-|+.... ..+. +. .|+ ..++-+..++++.+-
T Consensus 43 ~~PrvLITG~LGQLG~~~A~LLR~~y--Gs---~~VILSDI~KPp----~~V~---~~-GPyIy~DILD~K~L~eIVVn~ 109 (366)
T KOG2774|consen 43 KAPRVLITGSLGQLGRGLASLLRYMY--GS---ECVILSDIVKPP----ANVT---DV-GPYIYLDILDQKSLEEIVVNK 109 (366)
T ss_pred CCCeEEEecchHHHhHHHHHHHHHHh--CC---ccEehhhccCCc----hhhc---cc-CCchhhhhhccccHHHhhccc
Confidence 45799999999999999999886431 11 267888875321 1111 11 122 234545556666553
Q ss_pred CCcEEEEecCCCCCCCCChhH-HHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHH-CC--CC-CCCcEEE
Q 019990 81 DVNIAVMVGGFPRKEGMERKD-VMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEF-AP--SI-PAKNITC 155 (332)
Q Consensus 81 ~aDiVi~~ag~~~~~~~~~~~-~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~-~~--~~-~~~~i~~ 155 (332)
..|-.||..+.-...|+.... -.+.|+.++.++++.++++. .++.+-|. +....+...+. .+ .+ .|+.|||
T Consensus 110 RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~k---L~iFVPST-IGAFGPtSPRNPTPdltIQRPRTIYG 185 (366)
T KOG2774|consen 110 RIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHK---LKVFVPST-IGAFGPTSPRNPTPDLTIQRPRTIYG 185 (366)
T ss_pred ccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcC---eeEeeccc-ccccCCCCCCCCCCCeeeecCceeec
Confidence 467788853321111211111 24679999999999999883 45444331 11111100000 00 01 2455999
Q ss_pred eecccHHHHHHHHHHHcCCCCCCeeeeEEEec---CC---CceeecccCccc
Q 019990 156 LTRLDHNRAMGQISERLKVHVSDVKNVIIWGN---HS---STQYPDVNHATV 201 (332)
Q Consensus 156 ~t~l~~~r~~~~~a~~~~v~~~~v~~~~V~G~---hg---~~~v~~~s~~~v 201 (332)
+++...+-+-..+-.++|++....|..-++.. .| +-.+..|..+..
T Consensus 186 VSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~ 237 (366)
T KOG2774|consen 186 VSKVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQ 237 (366)
T ss_pred hhHHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHH
Confidence 99999888888888899999888885544432 12 335666766665
No 358
>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.16 E-value=0.0054 Score=57.79 Aligned_cols=83 Identities=22% Similarity=0.277 Sum_probs=52.4
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhh--hhcc------CCccceEEeCCH
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELI--DAAF------PLLKGVVATTDV 75 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~--~~~~------~~~~~v~~~~~~ 75 (332)
+.+||+|+| +|.-|++++..|..++.....-..+|.++.+++.. .-.....++. +.+. .+..++..++|+
T Consensus 10 ~~~ki~ViG-aG~wGtAlA~~l~~n~~~~~~~~~~V~lw~~~~~~-~~~~~~~~in~~~~N~~ylp~~~Lp~ni~~tsdl 87 (365)
T PTZ00345 10 GPLKVSVIG-SGNWGSAISKVVGENTQRNYIFHNEVRMWVLEEIV-EGEKLSDIINTKHENVKYLPGIKLPDNIVAVSDL 87 (365)
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHhcCCcccCCCCeEEEEEecccc-cchHHHHHHHhcCCCcccCCCCcCCCceEEecCH
Confidence 468999999 69999999999987752100000278888765310 0011122332 1121 234577778888
Q ss_pred HHHhCCCcEEEEe
Q 019990 76 VEACKDVNIAVMV 88 (332)
Q Consensus 76 ~~a~~~aDiVi~~ 88 (332)
.++++++|+||+.
T Consensus 88 ~eav~~aDiIvlA 100 (365)
T PTZ00345 88 KEAVEDADLLIFV 100 (365)
T ss_pred HHHHhcCCEEEEE
Confidence 8899999988876
No 359
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.12 E-value=0.0084 Score=55.76 Aligned_cols=103 Identities=11% Similarity=0.234 Sum_probs=61.5
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc----cCCccceEEeCCHHHHh-C
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA----FPLLKGVVATTDVVEAC-K 80 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~----~~~~~~v~~~~~~~~a~-~ 80 (332)
|||+|+| +|.+|+.++..|.+.+. +|.+++++. +..+....+-.+.. .....++..+.+..+++ .
T Consensus 1 MkI~IiG-aGa~G~ala~~L~~~g~-------~V~l~~r~~--~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 70 (326)
T PRK14620 1 MKISILG-AGSFGTAIAIALSSKKI-------SVNLWGRNH--TTFESINTKRKNLKYLPTCHLPDNISVKSAIDEVLSD 70 (326)
T ss_pred CEEEEEC-cCHHHHHHHHHHHHCCC-------eEEEEecCH--HHHHHHHHcCCCcccCCCCcCCCCeEEeCCHHHHHhC
Confidence 4799999 69999999999998875 789999853 22221111100010 01123455566777776 5
Q ss_pred CCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHh-hcCCCcEEEEEeCCh
Q 019990 81 DVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEK-HAAPNCKVLVVANPA 134 (332)
Q Consensus 81 ~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~-~~~~~~~viv~snp~ 134 (332)
++|+||++.- ...+.++++.+.. +-.++..++..+|-.
T Consensus 71 ~~Dliiiavk----------------s~~~~~~l~~l~~~~l~~~~~vv~~~nGi 109 (326)
T PRK14620 71 NATCIILAVP----------------TQQLRTICQQLQDCHLKKNTPILICSKGI 109 (326)
T ss_pred CCCEEEEEeC----------------HHHHHHHHHHHHHhcCCCCCEEEEEEcCe
Confidence 8999998731 1113344455544 323455667777765
No 360
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=97.12 E-value=0.00076 Score=60.48 Aligned_cols=75 Identities=23% Similarity=0.286 Sum_probs=51.2
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcEE
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIA 85 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDiV 85 (332)
++|+||||+|++|++++..|+..+. +|+..-++. +.+.... ... .....++.....+..++++.|.+
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~-------~v~~~~r~~--~~~~~~~---~~v-~~~~~d~~~~~~l~~a~~G~~~~ 67 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGH-------EVRAAVRNP--EAAAALA---GGV-EVVLGDLRDPKSLVAGAKGVDGV 67 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCC-------EEEEEEeCH--HHHHhhc---CCc-EEEEeccCCHhHHHHHhccccEE
Confidence 4799999999999999999998865 677766543 2222111 111 01124555666777889999999
Q ss_pred EEecCCCC
Q 019990 86 VMVGGFPR 93 (332)
Q Consensus 86 i~~ag~~~ 93 (332)
+++.+...
T Consensus 68 ~~i~~~~~ 75 (275)
T COG0702 68 LLISGLLD 75 (275)
T ss_pred EEEecccc
Confidence 99876543
No 361
>KOG2304 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]
Probab=97.11 E-value=0.0012 Score=56.92 Aligned_cols=105 Identities=23% Similarity=0.377 Sum_probs=69.1
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhh----hhHhhhhhhcc------CC--------
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALN----GVKMELIDAAF------PL-------- 65 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~----~~~~dl~~~~~------~~-------- 65 (332)
+.+.|+|+| +|..||-+++.-+..|+ .|.|+|.+++ .+. +....+.+.+. +.
T Consensus 10 ~~~~V~ivG-aG~MGSGIAQv~a~sg~-------~V~l~d~~~~--aL~~A~~~I~~sl~rvakKk~~~~~~~~~e~v~~ 79 (298)
T KOG2304|consen 10 EIKNVAIVG-AGQMGSGIAQVAATSGL-------NVWLVDANED--ALSRATKAISSSLKRVAKKKKADDPVALEEFVDD 79 (298)
T ss_pred cccceEEEc-ccccchhHHHHHHhcCC-------ceEEecCCHH--HHHHHHHHHHHHHHHHHhhcccCChhhHHHHHHH
Confidence 456799999 69999999999888887 8999998642 222 11222222110 10
Q ss_pred -ccceEEeCCHHHHhCCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCCh
Q 019990 66 -LKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPA 134 (332)
Q Consensus 66 -~~~v~~~~~~~~a~~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~ 134 (332)
...+..++++.+++.++|+||- -...|+++-+.+.+.+.+.|.++. +++||..
T Consensus 80 ~l~ri~~~tnv~~~v~dadliiE--------------AivEn~diK~~lF~~l~~~ak~~~--il~tNTS 133 (298)
T KOG2304|consen 80 TLDRIKTSTNVSDAVSDADLIIE--------------AIVENLDIKRKLFKDLDKIAKSST--ILATNTS 133 (298)
T ss_pred HHHHHHHcCCHHHhhhhhHHHHH--------------HHHHhHHHHHHHHHHHHhhcccce--EEeeccc
Confidence 1233445666677777777652 245688889999999999985443 5667753
No 362
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.10 E-value=0.0059 Score=56.34 Aligned_cols=53 Identities=15% Similarity=0.228 Sum_probs=42.7
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
+.|||+|+| +|.+|++++..|...++ +|.++|++.. .++.++++++|
T Consensus 3 ~~m~I~iiG-~G~~G~~lA~~l~~~G~-------~V~~~~r~~~-------------------------~~~~~~~~~ad 49 (308)
T PRK14619 3 QPKTIAILG-AGAWGSTLAGLASANGH-------RVRVWSRRSG-------------------------LSLAAVLADAD 49 (308)
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHHCCC-------EEEEEeCCCC-------------------------CCHHHHHhcCC
Confidence 467999999 79999999999998886 8999997421 23456678899
Q ss_pred EEEEec
Q 019990 84 IAVMVG 89 (332)
Q Consensus 84 iVi~~a 89 (332)
+||++.
T Consensus 50 vvi~~v 55 (308)
T PRK14619 50 VIVSAV 55 (308)
T ss_pred EEEEEC
Confidence 998874
No 363
>PRK08655 prephenate dehydrogenase; Provisional
Probab=97.07 E-value=0.018 Score=55.83 Aligned_cols=66 Identities=21% Similarity=0.366 Sum_probs=46.2
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcEE
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIA 85 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDiV 85 (332)
|||+|+||+|.+|..++..|...++ +|.++|++. +.......++ .+....+..+++.++|+|
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~-------~V~v~~r~~--~~~~~~a~~~---------gv~~~~~~~e~~~~aDvV 62 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGF-------EVIVTGRDP--KKGKEVAKEL---------GVEYANDNIDAAKDADIV 62 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCC-------EEEEEECCh--HHHHHHHHHc---------CCeeccCHHHHhccCCEE
Confidence 4799999889999999999998775 789999753 1211111111 122345666778999999
Q ss_pred EEec
Q 019990 86 VMVG 89 (332)
Q Consensus 86 i~~a 89 (332)
|++.
T Consensus 63 Ilav 66 (437)
T PRK08655 63 IISV 66 (437)
T ss_pred EEec
Confidence 9875
No 364
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.03 E-value=0.0023 Score=54.84 Aligned_cols=78 Identities=14% Similarity=0.140 Sum_probs=48.5
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhh-ccCC-ccceEEeCCHHHHhCC
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDA-AFPL-LKGVVATTDVVEACKD 81 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~-~~~~-~~~v~~~~~~~~a~~~ 81 (332)
+.++++|+||+|.+|+.++..|...+. ++.+++++. +++.....++.+. .... ..+.....++.+++++
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-------~V~l~~R~~--~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-------RVVLVGRDL--ERAQKAADSLRARFGEGVGAVETSDDAARAAAIKG 97 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEcCCH--HHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhc
Confidence 457899999999999999999988764 788888753 3343333333211 0000 0111112334577899
Q ss_pred CcEEEEecC
Q 019990 82 VNIAVMVGG 90 (332)
Q Consensus 82 aDiVi~~ag 90 (332)
+|+||.+..
T Consensus 98 ~diVi~at~ 106 (194)
T cd01078 98 ADVVFAAGA 106 (194)
T ss_pred CCEEEECCC
Confidence 999887643
No 365
>PRK09620 hypothetical protein; Provisional
Probab=97.02 E-value=0.00062 Score=60.00 Aligned_cols=34 Identities=21% Similarity=0.216 Sum_probs=29.8
Q ss_pred CCcEEEEEcCC----------------ChhHHHHHHHHHhcccCCCCCCeEEEEEec
Q 019990 4 NPLRVLVTGAA----------------GQIGYALVPMIARGIMLGPDQPVILHMLDI 44 (332)
Q Consensus 4 ~~~kI~VtGaa----------------G~IGs~l~~~L~~~~~~~~~~~~~i~l~D~ 44 (332)
..+||+||+|. ||+|++++..|+..|. +|+++|.
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga-------~V~li~g 51 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGA-------HVIYLHG 51 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCC-------eEEEEeC
Confidence 45789999887 9999999999999886 8998885
No 366
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=96.94 E-value=0.0044 Score=52.48 Aligned_cols=118 Identities=18% Similarity=0.170 Sum_probs=61.8
Q ss_pred EEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEeccc-chhhhhhhHhhhhhhcc---CCccceEEeCCHHHHhC--
Q 019990 7 RVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEP-AAEALNGVKMELIDAAF---PLLKGVVATTDVVEACK-- 80 (332)
Q Consensus 7 kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~-~~~~~~~~~~dl~~~~~---~~~~~v~~~~~~~~a~~-- 80 (332)
.++||||.|.+|..++..|...+. .+++++.+.. ..........++..... ....|++...++.+++.
T Consensus 2 tylitGG~gglg~~la~~La~~~~------~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~ 75 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGA------RRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQL 75 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-------SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTS
T ss_pred EEEEECCccHHHHHHHHHHHHcCC------CEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHH
Confidence 478999999999999999998774 2788988862 11112222333332211 11234444444444443
Q ss_pred -----CCcEEEEecCCCCCC---CCChhH---HHhhhHHHHHHHHHHHHhhcCCCcEEEEEeC
Q 019990 81 -----DVNIAVMVGGFPRKE---GMERKD---VMSKNVSIYKAQASALEKHAAPNCKVLVVAN 132 (332)
Q Consensus 81 -----~aDiVi~~ag~~~~~---~~~~~~---~~~~N~~~~~~i~~~i~~~~~~~~~viv~sn 132 (332)
..|.|||+||..... ..+..+ .+...+....++.+...... .+ .++++|+
T Consensus 76 ~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~-l~-~~i~~SS 136 (181)
T PF08659_consen 76 RQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRP-LD-FFILFSS 136 (181)
T ss_dssp HTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTT-TS-EEEEEEE
T ss_pred HhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCC-CC-eEEEECC
Confidence 347899999875421 222222 34455677778777777642 44 4566664
No 367
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=96.88 E-value=0.0066 Score=48.87 Aligned_cols=77 Identities=21% Similarity=0.204 Sum_probs=51.6
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
..++|+|+| +|.+|+.++..|...+. .+|.+++++. ++++.....+.. ....+....++.+.+.++|
T Consensus 11 ~~~~vlviG-aGg~ar~v~~~L~~~g~------~~i~i~nRt~--~ra~~l~~~~~~----~~~~~~~~~~~~~~~~~~D 77 (135)
T PF01488_consen 11 KGKRVLVIG-AGGAARAVAAALAALGA------KEITIVNRTP--ERAEALAEEFGG----VNIEAIPLEDLEEALQEAD 77 (135)
T ss_dssp TTSEEEEES-SSHHHHHHHHHHHHTTS------SEEEEEESSH--HHHHHHHHHHTG----CSEEEEEGGGHCHHHHTES
T ss_pred CCCEEEEEC-CHHHHHHHHHHHHHcCC------CEEEEEECCH--HHHHHHHHHcCc----cccceeeHHHHHHHHhhCC
Confidence 467999999 69999999999998875 2799999853 334333333211 0112333456667788999
Q ss_pred EEEEecCCCC
Q 019990 84 IAVMVGGFPR 93 (332)
Q Consensus 84 iVi~~ag~~~ 93 (332)
+||.+.+.+.
T Consensus 78 ivI~aT~~~~ 87 (135)
T PF01488_consen 78 IVINATPSGM 87 (135)
T ss_dssp EEEE-SSTTS
T ss_pred eEEEecCCCC
Confidence 9999876543
No 368
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=96.85 E-value=0.04 Score=50.76 Aligned_cols=159 Identities=14% Similarity=0.072 Sum_probs=84.0
Q ss_pred CCCcEEEEEcC--CChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhh-----------h-----ccC
Q 019990 3 KNPLRVLVTGA--AGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELID-----------A-----AFP 64 (332)
Q Consensus 3 ~~~~kI~VtGa--aG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~-----------~-----~~~ 64 (332)
.+.+.++|||| +.-||.+++..|++.|. +|++ .+.. +.++....++.. . ...
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga-------~Vv~-~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGA-------EILV-GTWV--PALNIFETSLRRGKFDESRKLPDGSLMEITKV 76 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCC-------EEEE-EeCc--chhhHHHHhhhccccchhhhcccccccCcCee
Confidence 34678999998 68999999999999885 7777 3221 122222211110 0 000
Q ss_pred CccceEE--eC------------------CHHHH-------hCCCcEEEEecCCCC---CC--CCChhH---HHhhhHHH
Q 019990 65 LLKGVVA--TT------------------DVVEA-------CKDVNIAVMVGGFPR---KE--GMERKD---VMSKNVSI 109 (332)
Q Consensus 65 ~~~~v~~--~~------------------~~~~a-------~~~aDiVi~~ag~~~---~~--~~~~~~---~~~~N~~~ 109 (332)
+..|+.. .. ++.+. +-..|++|+.||... .+ ..+.++ .+..|+..
T Consensus 77 ~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~ 156 (303)
T PLN02730 77 YPLDAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYS 156 (303)
T ss_pred eecceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHH
Confidence 1123311 11 12221 235799999996421 11 223322 35667665
Q ss_pred HHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCc-EEEeecccHHHHHHHHHHHcCCCCCCeee
Q 019990 110 YKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERLKVHVSDVKN 181 (332)
Q Consensus 110 ~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~-i~~~t~l~~~r~~~~~a~~~~v~~~~v~~ 181 (332)
.-.+.+.+...-...+.+|++|+.... ...|... .|+.+|-.-..+.+.++..++- ...||.
T Consensus 157 ~~~l~~~~~p~m~~~G~II~isS~a~~---------~~~p~~~~~Y~asKaAl~~l~~~la~El~~-~~gIrV 219 (303)
T PLN02730 157 FVSLLQHFGPIMNPGGASISLTYIASE---------RIIPGYGGGMSSAKAALESDTRVLAFEAGR-KYKIRV 219 (303)
T ss_pred HHHHHHHHHHHHhcCCEEEEEechhhc---------CCCCCCchhhHHHHHHHHHHHHHHHHHhCc-CCCeEE
Confidence 555544443331123577777652211 1122222 4677888888888888888752 245664
No 369
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=96.85 E-value=0.015 Score=51.51 Aligned_cols=153 Identities=17% Similarity=0.134 Sum_probs=78.4
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhh----hhccCCccceEE-eCCH
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELI----DAAFPLLKGVVA-TTDV 75 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~----~~~~~~~~~v~~-~~~~ 75 (332)
|...++.|+||||++-||..++..|.+.|. .+++.................. ........|++. ..+.
T Consensus 1 ~~~~~~~ilITGas~GiG~aia~~l~~~G~-------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v 73 (251)
T COG1028 1 MDLSGKVALVTGASSGIGRAIARALAREGA-------RVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESV 73 (251)
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-------eEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHH
Confidence 456778999999999999999999998775 5555544321100111111111 011111123332 2111
Q ss_pred H-------HHhCCCcEEEEecCCCCC----CCCChh---HHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHH
Q 019990 76 V-------EACKDVNIAVMVGGFPRK----EGMERK---DVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALIL 141 (332)
Q Consensus 76 ~-------~a~~~aDiVi~~ag~~~~----~~~~~~---~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~ 141 (332)
. +.+-..|++|+.||.... ...+.+ ..+..|......+...+....... +++++++.... .
T Consensus 74 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~Iv~isS~~~~-~--- 148 (251)
T COG1028 74 EALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ-RIVNISSVAGL-G--- 148 (251)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC-eEEEECCchhc-C---
Confidence 1 112348999999987431 122222 345667654444444443332123 56666653321 1
Q ss_pred HHHCCCCCC-CcEEEeecccHHHHHHHHHHH
Q 019990 142 KEFAPSIPA-KNITCLTRLDHNRAMGQISER 171 (332)
Q Consensus 142 ~~~~~~~~~-~~i~~~t~l~~~r~~~~~a~~ 171 (332)
.+. ...|+.+|..-..+...++..
T Consensus 149 ------~~~~~~~Y~~sK~al~~~~~~l~~e 173 (251)
T COG1028 149 ------GPPGQAAYAASKAALIGLTKALALE 173 (251)
T ss_pred ------CCCCcchHHHHHHHHHHHHHHHHHH
Confidence 111 134666777777777777733
No 370
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=96.83 E-value=0.0078 Score=49.13 Aligned_cols=116 Identities=16% Similarity=0.297 Sum_probs=66.4
Q ss_pred EEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc----CCc----cceEEeCCHHHHh
Q 019990 8 VLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF----PLL----KGVVATTDVVEAC 79 (332)
Q Consensus 8 I~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~----~~~----~~v~~~~~~~~a~ 79 (332)
|+|+| +|.||+.++..|.+.+. +|.++++.. .++. +..... ... ..........+..
T Consensus 1 I~I~G-~GaiG~~~a~~L~~~g~-------~V~l~~r~~---~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (151)
T PF02558_consen 1 ILIIG-AGAIGSLYAARLAQAGH-------DVTLVSRSP---RLEA----IKEQGLTITGPDGDETVQPPIVISAPSADA 65 (151)
T ss_dssp EEEES-TSHHHHHHHHHHHHTTC-------EEEEEESHH---HHHH----HHHHCEEEEETTEEEEEEEEEEESSHGHHH
T ss_pred CEEEC-cCHHHHHHHHHHHHCCC-------ceEEEEccc---cHHh----hhheeEEEEecccceecccccccCcchhcc
Confidence 78999 69999999999988775 899999753 1111 111100 110 0111112222456
Q ss_pred CCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCcE-EEeec
Q 019990 80 KDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTR 158 (332)
Q Consensus 80 ~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~i-~~~t~ 158 (332)
..+|+||++. |. .+ ..+.++.++.+..++..++..-|-.+.... +.+. +++.++ .+.+.
T Consensus 66 ~~~D~viv~v----Ka----~~--------~~~~l~~l~~~~~~~t~iv~~qNG~g~~~~-l~~~---~~~~~v~~g~~~ 125 (151)
T PF02558_consen 66 GPYDLVIVAV----KA----YQ--------LEQALQSLKPYLDPNTTIVSLQNGMGNEEV-LAEY---FPRPRVLGGVTT 125 (151)
T ss_dssp STESEEEE-S----SG----GG--------HHHHHHHHCTGEETTEEEEEESSSSSHHHH-HHCH---STGSGEEEEEEE
T ss_pred CCCcEEEEEe----cc----cc--------hHHHHHHHhhccCCCcEEEEEeCCCCcHHH-HHHH---cCCCcEEEEEEe
Confidence 8899999984 11 00 234566677776566677888887664433 3332 455564 44444
No 371
>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism]
Probab=96.81 E-value=0.015 Score=53.54 Aligned_cols=126 Identities=21% Similarity=0.256 Sum_probs=69.0
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcEE
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIA 85 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDiV 85 (332)
|||+|+| +|.||+.++..|.+.+. .+.++.+....+.++..-..+.+..... ..........+....+|+|
T Consensus 1 mkI~IlG-aGAvG~l~g~~L~~~g~-------~V~~~~R~~~~~~l~~~GL~i~~~~~~~-~~~~~~~~~~~~~~~~Dlv 71 (307)
T COG1893 1 MKILILG-AGAIGSLLGARLAKAGH-------DVTLLVRSRRLEALKKKGLRIEDEGGNF-TTPVVAATDAEALGPADLV 71 (307)
T ss_pred CeEEEEC-CcHHHHHHHHHHHhCCC-------eEEEEecHHHHHHHHhCCeEEecCCCcc-ccccccccChhhcCCCCEE
Confidence 5899999 79999999999998773 5666665321112221111111110000 0011122233456789999
Q ss_pred EEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCc-EEEeeccc
Q 019990 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLD 160 (332)
Q Consensus 86 i~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~-i~~~t~l~ 160 (332)
|++. |..+ +.+.++.++.+..++..+++.-|-....- .+.+. ++.++ +.|.|..-
T Consensus 72 iv~v----Ka~q------------~~~al~~l~~~~~~~t~vl~lqNG~g~~e-~l~~~---~~~~~il~G~~~~~ 127 (307)
T COG1893 72 IVTV----KAYQ------------LEEALPSLAPLLGPNTVVLFLQNGLGHEE-ELRKI---LPKETVLGGVTTHG 127 (307)
T ss_pred EEEe----cccc------------HHHHHHHhhhcCCCCcEEEEEeCCCcHHH-HHHHh---CCcceEEEEEeeee
Confidence 9974 2111 23556666666656667777788766543 33432 45555 44555543
No 372
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.75 E-value=0.026 Score=52.02 Aligned_cols=73 Identities=26% Similarity=0.232 Sum_probs=47.6
Q ss_pred CCCCC-cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHh
Q 019990 1 MAKNP-LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEAC 79 (332)
Q Consensus 1 m~~~~-~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~ 79 (332)
|+..+ +||+|+| +|.+|..++..|...+.. .+|.++|++. +.... ..... . ......+..+++
T Consensus 1 ~~~~~~~~I~IIG-~G~mG~sla~~l~~~g~~-----~~V~~~dr~~--~~~~~----a~~~g---~-~~~~~~~~~~~~ 64 (307)
T PRK07502 1 MSAPLFDRVALIG-IGLIGSSLARAIRRLGLA-----GEIVGADRSA--ETRAR----ARELG---L-GDRVTTSAAEAV 64 (307)
T ss_pred CCccCCcEEEEEe-eCHHHHHHHHHHHhcCCC-----cEEEEEECCH--HHHHH----HHhCC---C-CceecCCHHHHh
Confidence 66543 7899999 799999999999887641 2789999853 12211 11110 0 011223556678
Q ss_pred CCCcEEEEec
Q 019990 80 KDVNIAVMVG 89 (332)
Q Consensus 80 ~~aDiVi~~a 89 (332)
+++|+||++.
T Consensus 65 ~~aDvViiav 74 (307)
T PRK07502 65 KGADLVILCV 74 (307)
T ss_pred cCCCEEEECC
Confidence 8999999875
No 373
>PRK06928 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.74 E-value=0.027 Score=51.18 Aligned_cols=72 Identities=13% Similarity=0.143 Sum_probs=46.2
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcE
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNI 84 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDi 84 (332)
|+||+|+| +|.+|++++..|.+.+... +.++.+++++.. +++. .+... ...+....+..+.++++|+
T Consensus 1 m~~I~iIG-~G~mG~ala~~L~~~g~~~---~~~V~~~~r~~~-~~~~----~l~~~----~~~~~~~~~~~e~~~~aDv 67 (277)
T PRK06928 1 MEKIGFIG-YGSMADMIATKLLETEVAT---PEEIILYSSSKN-EHFN----QLYDK----YPTVELADNEAEIFTKCDH 67 (277)
T ss_pred CCEEEEEC-ccHHHHHHHHHHHHCCCCC---cccEEEEeCCcH-HHHH----HHHHH----cCCeEEeCCHHHHHhhCCE
Confidence 35899999 7999999999998876321 137888887531 1121 11110 0123334566677889999
Q ss_pred EEEec
Q 019990 85 AVMVG 89 (332)
Q Consensus 85 Vi~~a 89 (332)
||++.
T Consensus 68 Vilav 72 (277)
T PRK06928 68 SFICV 72 (277)
T ss_pred EEEec
Confidence 99874
No 374
>PLN00015 protochlorophyllide reductase
Probab=96.72 E-value=0.0076 Score=55.50 Aligned_cols=115 Identities=12% Similarity=0.087 Sum_probs=63.4
Q ss_pred EEEcCCChhHHHHHHHHHhcc-cCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--c-CCccceEEeCCHHHHh-----
Q 019990 9 LVTGAAGQIGYALVPMIARGI-MLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--F-PLLKGVVATTDVVEAC----- 79 (332)
Q Consensus 9 ~VtGaaG~IGs~l~~~L~~~~-~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~a~----- 79 (332)
+||||++.||.+++..|++.| . .|++.+++. +.+.....++.... . ....|+....++.+++
T Consensus 1 lITGas~GIG~aia~~l~~~G~~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 71 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKW-------HVVMACRDF--LKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRR 71 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCC-------EEEEEeCCH--HHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHh
Confidence 489999999999999999887 4 788887643 22322222222110 0 0112333322332222
Q ss_pred --CCCcEEEEecCCCCC----CCCChh---HHHhhhHHHH----HHHHHHHHhhcCCCcEEEEEeC
Q 019990 80 --KDVNIAVMVGGFPRK----EGMERK---DVMSKNVSIY----KAQASALEKHAAPNCKVLVVAN 132 (332)
Q Consensus 80 --~~aDiVi~~ag~~~~----~~~~~~---~~~~~N~~~~----~~i~~~i~~~~~~~~~viv~sn 132 (332)
...|++|+.||.... ...+.+ ..++.|+... +.+++.+.+.....++||++|+
T Consensus 72 ~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS 137 (308)
T PLN00015 72 SGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGS 137 (308)
T ss_pred cCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEec
Confidence 357999999987421 122322 3456676554 4555555543211357777765
No 375
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.71 E-value=0.012 Score=53.67 Aligned_cols=74 Identities=23% Similarity=0.225 Sum_probs=50.3
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcE
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNI 84 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDi 84 (332)
.++|+|+| +|.+|++++..|...+. .+|.++|++. ++.+....++.+.. +. ..+....++.+.++++|+
T Consensus 127 ~k~vlIlG-aGGaaraia~aL~~~G~------~~I~I~nR~~--~ka~~la~~l~~~~-~~-~~~~~~~~~~~~~~~aDi 195 (284)
T PRK12549 127 LERVVQLG-AGGAGAAVAHALLTLGV------ERLTIFDVDP--ARAAALADELNARF-PA-ARATAGSDLAAALAAADG 195 (284)
T ss_pred CCEEEEEC-CcHHHHHHHHHHHHcCC------CEEEEECCCH--HHHHHHHHHHHhhC-CC-eEEEeccchHhhhCCCCE
Confidence 46899999 69999999999998775 2799999864 45555544443321 11 122222345566889999
Q ss_pred EEEec
Q 019990 85 AVMVG 89 (332)
Q Consensus 85 Vi~~a 89 (332)
||.+-
T Consensus 196 VInaT 200 (284)
T PRK12549 196 LVHAT 200 (284)
T ss_pred EEECC
Confidence 99983
No 376
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=96.71 E-value=0.013 Score=49.62 Aligned_cols=121 Identities=17% Similarity=0.178 Sum_probs=73.2
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhc--cCCccceEEeCC----HHHH-
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAA--FPLLKGVVATTD----VVEA- 78 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~--~~~~~~v~~~~~----~~~a- 78 (332)
+...|+||+.-||.+++..|...|. ++...|.+. ...+..+.+|.... ..+..|++...+ +++.
T Consensus 15 k~~~vtGg~sGIGrAia~~la~~Ga-------rv~v~dl~~--~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~ 85 (256)
T KOG1200|consen 15 KVAAVTGGSSGIGRAIAQLLAKKGA-------RVAVADLDS--AAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEME 85 (256)
T ss_pred ceeEEecCCchHHHHHHHHHHhcCc-------EEEEeecch--hhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHH
Confidence 4567899999999999999999885 888888864 23444455553311 112234443332 2222
Q ss_pred --hCCCcEEEEecCCCCCCC---CCh---hHHHhhhHHHHHHHHHHHHhh----cCCCcEEEEEeCChh
Q 019990 79 --CKDVNIAVMVGGFPRKEG---MER---KDVMSKNVSIYKAQASALEKH----AAPNCKVLVVANPAN 135 (332)
Q Consensus 79 --~~~aDiVi~~ag~~~~~~---~~~---~~~~~~N~~~~~~i~~~i~~~----~~~~~~viv~snp~~ 135 (332)
+--.+++|.+||+.+..- +.. ++.+..|+.++--+.+++.+. ......+|++|+-+.
T Consensus 86 k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVG 154 (256)
T KOG1200|consen 86 KSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVG 154 (256)
T ss_pred HhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhc
Confidence 234699999999865421 222 345677877765544444333 212346788886554
No 377
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=96.70 E-value=0.0083 Score=57.79 Aligned_cols=112 Identities=17% Similarity=0.198 Sum_probs=64.0
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcc-cCCCCCCeEEEEEecccch----hhhhhhHhh-----hhhh--c-----cCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGI-MLGPDQPVILHMLDIEPAA----EALNGVKME-----LIDA--A-----FPLL 66 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~-~~~~~~~~~i~l~D~~~~~----~~~~~~~~d-----l~~~--~-----~~~~ 66 (332)
+.+.|+||||+||+|.-++..|+..- -. .+|.|+=+.... +++.+...+ +... . .+..
T Consensus 11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v-----~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~ 85 (467)
T KOG1221|consen 11 KNKTIFVTGATGFLGKVLIEKLLRTTPDV-----KRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIA 85 (467)
T ss_pred CCCeEEEEcccchhHHHHHHHHHhcCcCc-----ceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecc
Confidence 35789999999999999998887632 22 256665443221 122221111 0000 0 1122
Q ss_pred cceEE-----e-CCHHHHhCCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhc
Q 019990 67 KGVVA-----T-TDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHA 121 (332)
Q Consensus 67 ~~v~~-----~-~~~~~a~~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~ 121 (332)
+|+.. . .|...-.++.|+|||+|+..+-. ++-..-+.-|..+++.+.+.+++..
T Consensus 86 GDi~~~~LGis~~D~~~l~~eV~ivih~AAtvrFd-e~l~~al~iNt~Gt~~~l~lak~~~ 145 (467)
T KOG1221|consen 86 GDISEPDLGISESDLRTLADEVNIVIHSAATVRFD-EPLDVALGINTRGTRNVLQLAKEMV 145 (467)
T ss_pred ccccCcccCCChHHHHHHHhcCCEEEEeeeeeccc-hhhhhhhhhhhHhHHHHHHHHHHhh
Confidence 33322 1 34444467889999998765432 2222235668899999888888763
No 378
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=96.68 E-value=0.0058 Score=57.00 Aligned_cols=74 Identities=27% Similarity=0.417 Sum_probs=43.8
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEe-CCHHHHh
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVAT-TDVVEAC 79 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~-~~~~~a~ 79 (332)
|+ +|+||+|+||+|++|..++..|.+.++ +..+++.+.... ..|....+.. .++... .+. ..+
T Consensus 1 m~-~~~~IaIvGATG~vG~eLlrlL~~~~h----P~~~l~~v~s~~----~aG~~l~~~~------~~l~~~~~~~-~~~ 64 (336)
T PRK05671 1 MS-QPLDIAVVGATGTVGEALVQILEERDF----PVGTLHLLASSE----SAGHSVPFAG------KNLRVREVDS-FDF 64 (336)
T ss_pred CC-CCCEEEEEccCCHHHHHHHHHHhhCCC----CceEEEEEECcc----cCCCeeccCC------cceEEeeCCh-HHh
Confidence 64 568999999999999999999986543 113666664422 1122222111 122221 122 236
Q ss_pred CCCcEEEEecC
Q 019990 80 KDVNIAVMVGG 90 (332)
Q Consensus 80 ~~aDiVi~~ag 90 (332)
+++|+||++.+
T Consensus 65 ~~vD~vFla~p 75 (336)
T PRK05671 65 SQVQLAFFAAG 75 (336)
T ss_pred cCCCEEEEcCC
Confidence 88999988653
No 379
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.67 E-value=0.0016 Score=62.03 Aligned_cols=77 Identities=21% Similarity=0.317 Sum_probs=45.2
Q ss_pred EEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccC-CccceEEeCCHHHHhCCCcEEE
Q 019990 8 VLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFP-LLKGVVATTDVVEACKDVNIAV 86 (332)
Q Consensus 8 I~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~-~~~~v~~~~~~~~a~~~aDiVi 86 (332)
|+|+|| |++|+.++..|.+.... .++.+.|++. ++++.....+....+. ..-++....++.+.++++|+||
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~-----~~v~va~r~~--~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVi 72 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPF-----EEVTVADRNP--EKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVI 72 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE------EEEEEESSH--HHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEE
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCC-----CcEEEEECCH--HHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEE
Confidence 789997 99999999999886531 1799999864 3333332221111110 1123333334667789999999
Q ss_pred EecCCC
Q 019990 87 MVGGFP 92 (332)
Q Consensus 87 ~~ag~~ 92 (332)
+++|..
T Consensus 73 n~~gp~ 78 (386)
T PF03435_consen 73 NCAGPF 78 (386)
T ss_dssp E-SSGG
T ss_pred ECCccc
Confidence 998753
No 380
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.66 E-value=0.011 Score=52.50 Aligned_cols=72 Identities=21% Similarity=0.206 Sum_probs=45.1
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
.++||+|+| +|.+|++++..|+..+... ..++.+++++. .++++ ++.+. + ++....+..+.++++|
T Consensus 3 ~~~kI~iIG-~G~mg~ala~~l~~~~~~~---~~~i~~~~~~~-~~~~~----~~~~~---~--~~~~~~~~~~~~~~~D 68 (245)
T PRK07634 3 KKHRILFIG-AGRMAEAIFSGLLKTSKEY---IEEIIVSNRSN-VEKLD----QLQAR---Y--NVSTTTDWKQHVTSVD 68 (245)
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHhCCCCC---cCeEEEECCCC-HHHHH----HHHHH---c--CcEEeCChHHHHhcCC
Confidence 457999999 7999999999998765311 11466776532 12222 22111 1 1233456677789999
Q ss_pred EEEEec
Q 019990 84 IAVMVG 89 (332)
Q Consensus 84 iVi~~a 89 (332)
+||++.
T Consensus 69 iViiav 74 (245)
T PRK07634 69 TIVLAM 74 (245)
T ss_pred EEEEec
Confidence 999873
No 381
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.60 E-value=0.025 Score=52.22 Aligned_cols=159 Identities=15% Similarity=0.119 Sum_probs=94.0
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccC-----CccceEEeCCHH---
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFP-----LLKGVVATTDVV--- 76 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~-----~~~~v~~~~~~~--- 76 (332)
.+.+.||||+..||...+..|+..|. +|++..++. ++....+.++...... ...|+.....+.
T Consensus 35 ~~~~vVTGansGIG~eta~~La~~Ga-------~Vv~~~R~~--~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa 105 (314)
T KOG1208|consen 35 GKVALVTGATSGIGFETARELALRGA-------HVVLACRNE--ERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFA 105 (314)
T ss_pred CcEEEEECCCCchHHHHHHHHHhCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHH
Confidence 35688999999999999999999884 788888754 3344444455431100 112332222221
Q ss_pred ----HHhCCCcEEEEecCCCCCCCC-Ch---hHHHhhhH----HHHHHHHHHHHhhcCCCcEEEEEeCChh----hHHHH
Q 019990 77 ----EACKDVNIAVMVGGFPRKEGM-ER---KDVMSKNV----SIYKAQASALEKHAAPNCKVLVVANPAN----TNALI 140 (332)
Q Consensus 77 ----~a~~~aDiVi~~ag~~~~~~~-~~---~~~~~~N~----~~~~~i~~~i~~~~~~~~~viv~snp~~----~~~~~ 140 (332)
+....-|+.|.-||+...+.. +. +..++.|- -.++.+++.+++.. | ++||++|+-.. .+..+
T Consensus 106 ~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~-~RIV~vsS~~~~~~~~~~~l 183 (314)
T KOG1208|consen 106 EEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-P-SRIVNVSSILGGGKIDLKDL 183 (314)
T ss_pred HHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCC-C-CCEEEEcCccccCccchhhc
Confidence 223367999999998433221 11 12344553 34466777777764 4 78888886321 11111
Q ss_pred HHHHCCCCCCCcEEEeecccHHHHHHHHHHHcCC
Q 019990 141 LKEFAPSIPAKNITCLTRLDHNRAMGQISERLKV 174 (332)
Q Consensus 141 ~~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v 174 (332)
..+....+...+.|+.+++....+...+++++.-
T Consensus 184 ~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~ 217 (314)
T KOG1208|consen 184 SGEKAKLYSSDAAYALSKLANVLLANELAKRLKK 217 (314)
T ss_pred cchhccCccchhHHHHhHHHHHHHHHHHHHHhhc
Confidence 1221111444445788899888889999998764
No 382
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=96.59 E-value=0.0062 Score=56.85 Aligned_cols=77 Identities=17% Similarity=0.361 Sum_probs=47.7
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhC
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACK 80 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~ 80 (332)
|+.+.+||+|+||+|.+|+.++..|.....+.. .++.++.... ..|....+. ..++.......+.++
T Consensus 1 ~~~~~~~VaIvGATG~vG~ell~lL~~h~~f~v---~~l~~~aS~~----saGk~~~~~------~~~l~v~~~~~~~~~ 67 (347)
T PRK06728 1 MSEKGYHVAVVGATGAVGQKIIELLEKETKFNI---AEVTLLSSKR----SAGKTVQFK------GREIIIQEAKINSFE 67 (347)
T ss_pred CCCCCCEEEEEeCCCHHHHHHHHHHHHCCCCCc---ccEEEEECcc----cCCCCeeeC------CcceEEEeCCHHHhc
Confidence 777888999999999999999998886444321 2477776432 223222111 112332211124568
Q ss_pred CCcEEEEecC
Q 019990 81 DVNIAVMVGG 90 (332)
Q Consensus 81 ~aDiVi~~ag 90 (332)
++|+||++++
T Consensus 68 ~~Divf~a~~ 77 (347)
T PRK06728 68 GVDIAFFSAG 77 (347)
T ss_pred CCCEEEECCC
Confidence 8999998764
No 383
>PRK07680 late competence protein ComER; Validated
Probab=96.57 E-value=0.036 Score=50.18 Aligned_cols=70 Identities=13% Similarity=0.286 Sum_probs=46.4
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcEE
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIA 85 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDiV 85 (332)
|||+|+| +|.+|++++..|.+.+... +.++.++|++. +.... +.+. . ..+....+..+.+.++|+|
T Consensus 1 m~I~iIG-~G~mG~ala~~L~~~g~~~---~~~v~v~~r~~--~~~~~----~~~~-~---~g~~~~~~~~~~~~~aDiV 66 (273)
T PRK07680 1 MNIGFIG-TGNMGTILIEAFLESGAVK---PSQLTITNRTP--AKAYH----IKER-Y---PGIHVAKTIEEVISQSDLI 66 (273)
T ss_pred CEEEEEC-ccHHHHHHHHHHHHCCCCC---cceEEEECCCH--HHHHH----HHHH-c---CCeEEECCHHHHHHhCCEE
Confidence 4799999 7999999999998876421 13688998853 22221 2110 0 1233445666778899999
Q ss_pred EEec
Q 019990 86 VMVG 89 (332)
Q Consensus 86 i~~a 89 (332)
|++.
T Consensus 67 ilav 70 (273)
T PRK07680 67 FICV 70 (273)
T ss_pred EEec
Confidence 9875
No 384
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.55 E-value=0.012 Score=53.39 Aligned_cols=70 Identities=21% Similarity=0.234 Sum_probs=46.1
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcEE
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIA 85 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDiV 85 (332)
|||+++| +|.+|++++..|+..+... +.++.++|++.. +++. ++... + .+....+..+.++++|+|
T Consensus 4 mkI~~IG-~G~mG~aia~~l~~~g~~~---~~~v~v~~r~~~-~~~~----~l~~~---~--g~~~~~~~~e~~~~aDvV 69 (279)
T PRK07679 4 QNISFLG-AGSIAEAIIGGLLHANVVK---GEQITVSNRSNE-TRLQ----ELHQK---Y--GVKGTHNKKELLTDANIL 69 (279)
T ss_pred CEEEEEC-ccHHHHHHHHHHHHCCCCC---cceEEEECCCCH-HHHH----HHHHh---c--CceEeCCHHHHHhcCCEE
Confidence 5999999 7999999999998876221 237888887431 1222 22111 0 133345666778899999
Q ss_pred EEec
Q 019990 86 VMVG 89 (332)
Q Consensus 86 i~~a 89 (332)
|++.
T Consensus 70 ilav 73 (279)
T PRK07679 70 FLAM 73 (279)
T ss_pred EEEe
Confidence 9874
No 385
>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=96.54 E-value=0.055 Score=50.75 Aligned_cols=109 Identities=18% Similarity=0.189 Sum_probs=67.9
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc--------------CCccceE
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF--------------PLLKGVV 70 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~--------------~~~~~v~ 70 (332)
.++|+|+| -|+||..++-.+...|. .+.-+|++.. +.. .++.... ...+.++
T Consensus 9 ~~~I~ViG-LGYVGLPlA~~fA~~G~-------~ViG~DIn~~--~Vd----~ln~G~~~i~e~~~~~~v~~~v~~g~lr 74 (436)
T COG0677 9 SATIGVIG-LGYVGLPLAAAFASAGF-------KVIGVDINQK--KVD----KLNRGESYIEEPDLDEVVKEAVESGKLR 74 (436)
T ss_pred ceEEEEEc-cccccHHHHHHHHHcCC-------ceEeEeCCHH--HHH----HHhCCcceeecCcHHHHHHHHHhcCCce
Confidence 47999999 99999999999999886 7899998641 221 1111100 1124577
Q ss_pred EeCCHHHHhCCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEE-EeCCh
Q 019990 71 ATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLV-VANPA 134 (332)
Q Consensus 71 ~~~~~~~a~~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv-~snp~ 134 (332)
.+++.. .++.||+++++.-.|.+.. -+..+..+.+-++.+..+-.++-.+|+ .|.|.
T Consensus 75 aTtd~~-~l~~~dv~iI~VPTPl~~~------~~pDls~v~~aa~sIa~~L~kG~LVIlEST~~P 132 (436)
T COG0677 75 ATTDPE-ELKECDVFIICVPTPLKKY------REPDLSYVESAARSIAPVLKKGDLVILESTTPP 132 (436)
T ss_pred EecChh-hcccCCEEEEEecCCcCCC------CCCChHHHHHHHHHHHHhcCCCCEEEEecCCCC
Confidence 777764 4779999999976554321 122344555566666666433333444 44554
No 386
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.53 E-value=0.0094 Score=53.70 Aligned_cols=69 Identities=22% Similarity=0.274 Sum_probs=45.6
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcE
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNI 84 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDi 84 (332)
|+||+|+| +|.+|+.++..|.+.+.. ..++.++|++. +..+ .+.+. + .+....+..+.+.++|+
T Consensus 2 mm~I~iIG-~G~mG~~la~~l~~~g~~----~~~v~v~~r~~--~~~~----~~~~~---~--g~~~~~~~~~~~~~adv 65 (267)
T PRK11880 2 MKKIGFIG-GGNMASAIIGGLLASGVP----AKDIIVSDPSP--EKRA----ALAEE---Y--GVRAATDNQEAAQEADV 65 (267)
T ss_pred CCEEEEEe-chHHHHHHHHHHHhCCCC----cceEEEEcCCH--HHHH----HHHHh---c--CCeecCChHHHHhcCCE
Confidence 57899999 799999999999877631 13788999753 2222 12111 0 12233455666789999
Q ss_pred EEEec
Q 019990 85 AVMVG 89 (332)
Q Consensus 85 Vi~~a 89 (332)
||++.
T Consensus 66 Vil~v 70 (267)
T PRK11880 66 VVLAV 70 (267)
T ss_pred EEEEc
Confidence 99874
No 387
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=96.53 E-value=0.024 Score=51.52 Aligned_cols=65 Identities=18% Similarity=0.197 Sum_probs=42.6
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcEE
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIA 85 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDiV 85 (332)
|||+|+| .|.+|..++..|.+.++ +|.++|++. +.+.. +.... ..+ ....+. ++++++|+|
T Consensus 1 m~I~IIG-~G~mG~sla~~L~~~g~-------~V~~~d~~~--~~~~~----a~~~g---~~~-~~~~~~-~~~~~aDlV 61 (279)
T PRK07417 1 MKIGIVG-LGLIGGSLGLDLRSLGH-------TVYGVSRRE--STCER----AIERG---LVD-EASTDL-SLLKDCDLV 61 (279)
T ss_pred CeEEEEe-ecHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHH----HHHCC---Ccc-cccCCH-hHhcCCCEE
Confidence 4799999 79999999999988775 899999853 12211 11110 000 111233 467899999
Q ss_pred EEec
Q 019990 86 VMVG 89 (332)
Q Consensus 86 i~~a 89 (332)
|++.
T Consensus 62 ilav 65 (279)
T PRK07417 62 ILAL 65 (279)
T ss_pred EEcC
Confidence 9874
No 388
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=96.45 E-value=0.005 Score=54.15 Aligned_cols=73 Identities=15% Similarity=0.299 Sum_probs=45.9
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHH-hCCCcE
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEA-CKDVNI 84 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a-~~~aDi 84 (332)
|+++|+| +|.+|++++..|.+.|+ +++++|.++ ++......+-.+.. ....+-+...-+.++ +.++|+
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~g~-------~Vv~Id~d~--~~~~~~~~~~~~~~-~v~gd~t~~~~L~~agi~~aD~ 69 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEEGH-------NVVLIDRDE--ERVEEFLADELDTH-VVIGDATDEDVLEEAGIDDADA 69 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhCCC-------ceEEEEcCH--HHHHHHhhhhcceE-EEEecCCCHHHHHhcCCCcCCE
Confidence 5899999 79999999999999886 899999864 23322111111110 011222223335555 678999
Q ss_pred EEEec
Q 019990 85 AVMVG 89 (332)
Q Consensus 85 Vi~~a 89 (332)
++.+-
T Consensus 70 vva~t 74 (225)
T COG0569 70 VVAAT 74 (225)
T ss_pred EEEee
Confidence 98864
No 389
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=96.42 E-value=0.012 Score=54.01 Aligned_cols=64 Identities=19% Similarity=0.398 Sum_probs=45.9
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcEE
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIA 85 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDiV 85 (332)
+||+|+| .|.+|..++..|++.++ +|.++|++. +... ++... ......+..++++++|+|
T Consensus 2 ~~Ig~IG-lG~mG~~mA~~l~~~G~-------~V~v~d~~~--~~~~----~~~~~------g~~~~~s~~~~~~~aDvV 61 (296)
T PRK15461 2 AAIAFIG-LGQMGSPMASNLLKQGH-------QLQVFDVNP--QAVD----ALVDK------GATPAASPAQAAAGAEFV 61 (296)
T ss_pred CeEEEEe-eCHHHHHHHHHHHHCCC-------eEEEEcCCH--HHHH----HHHHc------CCcccCCHHHHHhcCCEE
Confidence 4899999 79999999999998875 899999864 2222 22211 122234566778999999
Q ss_pred EEec
Q 019990 86 VMVG 89 (332)
Q Consensus 86 i~~a 89 (332)
|++.
T Consensus 62 i~~v 65 (296)
T PRK15461 62 ITML 65 (296)
T ss_pred EEec
Confidence 9874
No 390
>PLN02688 pyrroline-5-carboxylate reductase
Probab=96.41 E-value=0.064 Score=48.20 Aligned_cols=68 Identities=19% Similarity=0.290 Sum_probs=45.5
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEE-ecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcE
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHML-DIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNI 84 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~-D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDi 84 (332)
|||+++| +|.+|++++..|++.++.. +.+++++ |++. ++.. .+... .+....+..++++++|+
T Consensus 1 ~kI~~IG-~G~mG~a~a~~L~~~g~~~---~~~i~v~~~r~~--~~~~----~~~~~------g~~~~~~~~e~~~~aDv 64 (266)
T PLN02688 1 FRVGFIG-AGKMAEAIARGLVASGVVP---PSRISTADDSNP--ARRD----VFQSL------GVKTAASNTEVVKSSDV 64 (266)
T ss_pred CeEEEEC-CcHHHHHHHHHHHHCCCCC---cceEEEEeCCCH--HHHH----HHHHc------CCEEeCChHHHHhcCCE
Confidence 5799999 8999999999999876421 2368888 6542 2221 12211 23334556677889999
Q ss_pred EEEec
Q 019990 85 AVMVG 89 (332)
Q Consensus 85 Vi~~a 89 (332)
||++.
T Consensus 65 Vil~v 69 (266)
T PLN02688 65 IILAV 69 (266)
T ss_pred EEEEE
Confidence 99885
No 391
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=96.40 E-value=0.047 Score=50.89 Aligned_cols=61 Identities=25% Similarity=0.291 Sum_probs=44.8
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcE
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNI 84 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDi 84 (332)
.++|+|+| .|.||+.++..|...|. +|..+|+... .. .+. .....++.+++++||+
T Consensus 146 g~~VgIIG-~G~IG~~vA~~L~~~G~-------~V~~~d~~~~--~~----~~~----------~~~~~~l~ell~~aDi 201 (330)
T PRK12480 146 NMTVAIIG-TGRIGAATAKIYAGFGA-------TITAYDAYPN--KD----LDF----------LTYKDSVKEAIKDADI 201 (330)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCC-------EEEEEeCChh--Hh----hhh----------hhccCCHHHHHhcCCE
Confidence 46899999 79999999999987765 8999997531 10 000 1113467888999999
Q ss_pred EEEec
Q 019990 85 AVMVG 89 (332)
Q Consensus 85 Vi~~a 89 (332)
|+.+.
T Consensus 202 Vil~l 206 (330)
T PRK12480 202 ISLHV 206 (330)
T ss_pred EEEeC
Confidence 98874
No 392
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=96.40 E-value=0.006 Score=54.55 Aligned_cols=113 Identities=15% Similarity=0.073 Sum_probs=70.4
Q ss_pred EEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEE-EecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcEE
Q 019990 7 RVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHM-LDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIA 85 (332)
Q Consensus 7 kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l-~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDiV 85 (332)
-..|.||+||+|..++..|...|- .+.+ +.-++..-+-....-||-+.. +..-+..+.+++.++++.+.+|
T Consensus 63 VaTVFGAtGFlGryvvnklak~GS-------QviiPyR~d~~~~r~lkvmGdLGQvl-~~~fd~~DedSIr~vvk~sNVV 134 (391)
T KOG2865|consen 63 VATVFGATGFLGRYVVNKLAKMGS-------QVIIPYRGDEYDPRHLKVMGDLGQVL-FMKFDLRDEDSIRAVVKHSNVV 134 (391)
T ss_pred EEEEecccccccHHHHHHHhhcCC-------eEEEeccCCccchhheeeccccccee-eeccCCCCHHHHHHHHHhCcEE
Confidence 357899999999999999988762 2222 221111101111222333221 1224566666788889999999
Q ss_pred EEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEe
Q 019990 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVA 131 (332)
Q Consensus 86 i~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~s 131 (332)
|.+.|-.... -..++.+.|..+.+.++..|++.+ -. ++|-+|
T Consensus 135 INLIGrd~eT--knf~f~Dvn~~~aerlAricke~G-Ve-rfIhvS 176 (391)
T KOG2865|consen 135 INLIGRDYET--KNFSFEDVNVHIAERLARICKEAG-VE-RFIHVS 176 (391)
T ss_pred EEeecccccc--CCcccccccchHHHHHHHHHHhhC-hh-heeehh
Confidence 9998853221 123466788899999999998876 22 566655
No 393
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=96.38 E-value=0.0065 Score=48.35 Aligned_cols=101 Identities=18% Similarity=0.199 Sum_probs=52.8
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcE
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNI 84 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDi 84 (332)
.+||.|+| +|.+|.+|+..|.+.++ +|.-+-.+.. +. ...+... ..... ..++.+.++++|+
T Consensus 10 ~l~I~iIG-aGrVG~~La~aL~~ag~-------~v~~v~srs~-~s----a~~a~~~----~~~~~-~~~~~~~~~~aDl 71 (127)
T PF10727_consen 10 RLKIGIIG-AGRVGTALARALARAGH-------EVVGVYSRSP-AS----AERAAAF----IGAGA-ILDLEEILRDADL 71 (127)
T ss_dssp --EEEEEC-TSCCCCHHHHHHHHTTS-------EEEEESSCHH--H----HHHHHC------TT------TTGGGCC-SE
T ss_pred ccEEEEEC-CCHHHHHHHHHHHHCCC-------eEEEEEeCCc-cc----ccccccc----ccccc-ccccccccccCCE
Confidence 57999999 69999999999998886 6655543221 11 1111111 11111 1245577899999
Q ss_pred EEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhh--cCCCcEEEEEeC---ChhhHHHH
Q 019990 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKH--AAPNCKVLVVAN---PANTNALI 140 (332)
Q Consensus 85 Vi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~--~~~~~~viv~sn---p~~~~~~~ 140 (332)
+|++.. ++ .+..+++.+..+ -.|+ .+++-++ +++++.++
T Consensus 72 v~iavp---------Dd-------aI~~va~~La~~~~~~~g-~iVvHtSGa~~~~vL~p~ 115 (127)
T PF10727_consen 72 VFIAVP---------DD-------AIAEVAEQLAQYGAWRPG-QIVVHTSGALGSDVLAPA 115 (127)
T ss_dssp EEE-S----------CC-------HHHHHHHHHHCC--S-TT--EEEES-SS--GGGGHHH
T ss_pred EEEEec---------hH-------HHHHHHHHHHHhccCCCC-cEEEECCCCChHHhhhhH
Confidence 999741 11 134666777665 2233 5555554 45666553
No 394
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=96.38 E-value=0.064 Score=49.40 Aligned_cols=33 Identities=18% Similarity=0.278 Sum_probs=28.7
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecc
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIE 45 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~ 45 (332)
.|||+|+| +|.||+.++..|.+.|. +|.++++.
T Consensus 2 ~m~I~IiG-aGaiG~~~a~~L~~~G~-------~V~lv~r~ 34 (305)
T PRK05708 2 SMTWHILG-AGSLGSLWACRLARAGL-------PVRLILRD 34 (305)
T ss_pred CceEEEEC-CCHHHHHHHHHHHhCCC-------CeEEEEec
Confidence 46899999 69999999999988774 78999874
No 395
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=96.36 E-value=0.011 Score=56.04 Aligned_cols=36 Identities=19% Similarity=0.328 Sum_probs=29.3
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIE 45 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~ 45 (332)
+++||+|+||+|.+|..++..|..... .+|.++..+
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~------~el~~l~s~ 72 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPD------FEITVMTAD 72 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCC------CeEEEEECh
Confidence 467999999999999999998887643 278887653
No 396
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=96.32 E-value=0.028 Score=51.58 Aligned_cols=67 Identities=13% Similarity=0.202 Sum_probs=43.0
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcEE
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIA 85 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDiV 85 (332)
|||+|+| .|.+|++++..|.+.++ +|.++|++. ++.. .+...... ......++.+.++++|+|
T Consensus 1 M~Ig~IG-lG~mG~~la~~L~~~g~-------~V~~~dr~~--~~~~----~l~~~g~~---~~~s~~~~~~~~~~~dvI 63 (298)
T TIGR00872 1 MQLGLIG-LGRMGANIVRRLAKRGH-------DCVGYDHDQ--DAVK----AMKEDRTT---GVANLRELSQRLSAPRVV 63 (298)
T ss_pred CEEEEEc-chHHHHHHHHHHHHCCC-------EEEEEECCH--HHHH----HHHHcCCc---ccCCHHHHHhhcCCCCEE
Confidence 4799999 79999999999998875 899999864 2222 22221100 011112333456778999
Q ss_pred EEec
Q 019990 86 VMVG 89 (332)
Q Consensus 86 i~~a 89 (332)
+++.
T Consensus 64 i~~v 67 (298)
T TIGR00872 64 WVMV 67 (298)
T ss_pred EEEc
Confidence 9873
No 397
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=96.32 E-value=0.065 Score=52.37 Aligned_cols=71 Identities=14% Similarity=0.061 Sum_probs=46.3
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhC---C
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACK---D 81 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~---~ 81 (332)
|.+|+|+| .|.+|++++..|+..|+ +|.++|++. ++.. ++..........+....++.++++ +
T Consensus 1 ~~~IgvIG-LG~MG~~lA~nL~~~G~-------~V~v~dr~~--~~~~----~l~~~~~~~g~~i~~~~s~~e~v~~l~~ 66 (470)
T PTZ00142 1 MSDIGLIG-LAVMGQNLALNIASRGF-------KISVYNRTY--EKTE----EFVKKAKEGNTRVKGYHTLEELVNSLKK 66 (470)
T ss_pred CCEEEEEe-EhHHHHHHHHHHHHCCC-------eEEEEeCCH--HHHH----HHHHhhhhcCCcceecCCHHHHHhcCCC
Confidence 35899999 89999999999999886 899999864 2222 221110000112334456666654 5
Q ss_pred CcEEEEec
Q 019990 82 VNIAVMVG 89 (332)
Q Consensus 82 aDiVi~~a 89 (332)
+|+|+++.
T Consensus 67 ~d~Iil~v 74 (470)
T PTZ00142 67 PRKVILLI 74 (470)
T ss_pred CCEEEEEe
Confidence 89888764
No 398
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=96.28 E-value=0.013 Score=52.75 Aligned_cols=112 Identities=17% Similarity=0.281 Sum_probs=67.1
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhc----ccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccce--EEeCCHHHH
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARG----IMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGV--VATTDVVEA 78 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~----~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v--~~~~~~~~a 78 (332)
..||+|.| +|..|..++..|... |+...+-..++.++|.+. .+.....|+.+...++..+. ....++.++
T Consensus 25 d~~iv~~G-AGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~G---ll~~~r~~l~~~~~~~a~~~~~~~~~~L~e~ 100 (279)
T cd05312 25 DQRILFLG-AGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKG---LLTKDRKDLTPFKKPFARKDEEKEGKSLLEV 100 (279)
T ss_pred hcEEEEEC-cCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCC---eEeCCCCcchHHHHHHHhhcCcccCCCHHHH
Confidence 46899999 699999999988764 542111123799999764 12111112222111111111 123578999
Q ss_pred hC--CCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChh
Q 019990 79 CK--DVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPAN 135 (332)
Q Consensus 79 ~~--~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~ 135 (332)
++ ++|++|=+.+.+ | .+ .+++++.+.+++ +..+|+-.|||..
T Consensus 101 i~~v~ptvlIG~S~~~---g-----~f------t~evv~~Ma~~~-~~PIIFaLSNPt~ 144 (279)
T cd05312 101 VKAVKPTVLIGLSGVG---G-----AF------TEEVVRAMAKSN-ERPIIFALSNPTS 144 (279)
T ss_pred HHhcCCCEEEEeCCCC---C-----CC------CHHHHHHHHhcC-CCCEEEECCCcCC
Confidence 99 889988654432 2 11 246677788776 5567777899963
No 399
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=96.28 E-value=0.011 Score=55.26 Aligned_cols=72 Identities=19% Similarity=0.278 Sum_probs=41.9
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcE
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNI 84 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDi 84 (332)
++||+|+||+|++|..++..|.+.++- ..+++.+-.... .+....+.. .++........+++++|+
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp----~~~l~~l~s~~~----~g~~l~~~g------~~i~v~d~~~~~~~~vDv 66 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFP----VDKLRLLASARS----AGKELSFKG------KELKVEDLTTFDFSGVDI 66 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCC----cceEEEEEcccc----CCCeeeeCC------ceeEEeeCCHHHHcCCCE
Confidence 468999999999999999999875541 126666643221 121111111 122221111234578999
Q ss_pred EEEecC
Q 019990 85 AVMVGG 90 (332)
Q Consensus 85 Vi~~ag 90 (332)
||.+.|
T Consensus 67 Vf~A~g 72 (334)
T PRK14874 67 ALFSAG 72 (334)
T ss_pred EEECCC
Confidence 988764
No 400
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=96.19 E-value=0.023 Score=52.07 Aligned_cols=65 Identities=20% Similarity=0.335 Sum_probs=46.0
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcE
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNI 84 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDi 84 (332)
++||+|+| .|.+|+.++..|.+.++ +|.++|++. +... .+... ......+..+.++++|+
T Consensus 2 ~~~IgviG-~G~mG~~~a~~l~~~g~-------~v~~~d~~~--~~~~----~~~~~------g~~~~~~~~e~~~~~d~ 61 (296)
T PRK11559 2 TMKVGFIG-LGIMGKPMSKNLLKAGY-------SLVVYDRNP--EAVA----EVIAA------GAETASTAKAVAEQCDV 61 (296)
T ss_pred CceEEEEc-cCHHHHHHHHHHHHCCC-------eEEEEcCCH--HHHH----HHHHC------CCeecCCHHHHHhcCCE
Confidence 36899999 79999999999998775 788999753 1221 11111 12233456777899999
Q ss_pred EEEec
Q 019990 85 AVMVG 89 (332)
Q Consensus 85 Vi~~a 89 (332)
||.+.
T Consensus 62 vi~~v 66 (296)
T PRK11559 62 IITML 66 (296)
T ss_pred EEEeC
Confidence 99874
No 401
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=96.19 E-value=0.0034 Score=55.33 Aligned_cols=66 Identities=9% Similarity=0.129 Sum_probs=39.0
Q ss_pred cCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeC----CHHHHhCCCcEEEE
Q 019990 12 GAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATT----DVVEACKDVNIAVM 87 (332)
Q Consensus 12 GaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~----~~~~a~~~aDiVi~ 87 (332)
.++|++|++++..|+..|. +|++++.... .. ......... ..+.... .+.+.+.++|+|||
T Consensus 23 ~SSG~iG~aLA~~L~~~G~-------~V~li~r~~~---~~----~~~~~~v~~-i~v~s~~~m~~~l~~~~~~~DivIh 87 (229)
T PRK06732 23 HSTGQLGKIIAETFLAAGH-------EVTLVTTKTA---VK----PEPHPNLSI-IEIENVDDLLETLEPLVKDHDVLIH 87 (229)
T ss_pred ccchHHHHHHHHHHHhCCC-------EEEEEECccc---cc----CCCCCCeEE-EEEecHHHHHHHHHHHhcCCCEEEe
Confidence 4589999999999999886 8888875321 00 000000000 0111111 23345678999999
Q ss_pred ecCCC
Q 019990 88 VGGFP 92 (332)
Q Consensus 88 ~ag~~ 92 (332)
+||+.
T Consensus 88 ~AAvs 92 (229)
T PRK06732 88 SMAVS 92 (229)
T ss_pred CCccC
Confidence 99975
No 402
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.19 E-value=0.022 Score=51.61 Aligned_cols=69 Identities=19% Similarity=0.306 Sum_probs=45.9
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcEE
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIA 85 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDiV 85 (332)
+||+++| +|.+|++++..|++.++.. +.+|..+|++. +.++ .+.+. + .+....+..+.+++||+|
T Consensus 3 ~~IgfIG-~G~MG~aia~~L~~~g~~~---~~~I~v~~r~~--~~~~----~l~~~---~--g~~~~~~~~e~~~~aDiI 67 (272)
T PRK12491 3 KQIGFIG-CGNMGIAMIGGMINKNIVS---PDQIICSDLNV--SNLK----NASDK---Y--GITITTNNNEVANSADIL 67 (272)
T ss_pred CeEEEEC-ccHHHHHHHHHHHHCCCCC---CceEEEECCCH--HHHH----HHHHh---c--CcEEeCCcHHHHhhCCEE
Confidence 4799999 7999999999999877432 23788998753 2222 12110 0 123344556678899999
Q ss_pred EEec
Q 019990 86 VMVG 89 (332)
Q Consensus 86 i~~a 89 (332)
|++.
T Consensus 68 iLav 71 (272)
T PRK12491 68 ILSI 71 (272)
T ss_pred EEEe
Confidence 9874
No 403
>KOG2666 consensus UDP-glucose/GDP-mannose dehydrogenase [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=96.19 E-value=0.017 Score=52.32 Aligned_cols=81 Identities=20% Similarity=0.247 Sum_probs=53.0
Q ss_pred CcEEEEEcCCChhHHHHHHHHHh-cccCCCCCCeEEEEEecccchhhhhhhHhhh--------hhhccC-CccceEEeCC
Q 019990 5 PLRVLVTGAAGQIGYALVPMIAR-GIMLGPDQPVILHMLDIEPAAEALNGVKMEL--------IDAAFP-LLKGVVATTD 74 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~-~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl--------~~~~~~-~~~~v~~~~~ 74 (332)
++||+-+| +|++|......++. +.. .++.++|++.. +....--|- .+.... ...++...+|
T Consensus 1 ~~kiccig-agyvggptcavia~kcp~------i~vtvvd~s~~--ri~~wnsd~lpiyepgldevv~~crgknlffstd 71 (481)
T KOG2666|consen 1 MVKICCIG-AGYVGGPTCAVIALKCPD------IEVTVVDISVP--RINAWNSDKLPIYEPGLDEVVKQCRGKNLFFSTD 71 (481)
T ss_pred CceEEEec-CcccCCcchheeeecCCc------eEEEEEecCch--HhhcccCCCCcccCCCHHHHHHHhcCCceeeecc
Confidence 46999999 69999887765543 322 48999998652 332221111 011011 1357888899
Q ss_pred HHHHhCCCcEEEEecCCCCC
Q 019990 75 VVEACKDVNIAVMVGGFPRK 94 (332)
Q Consensus 75 ~~~a~~~aDiVi~~ag~~~~ 94 (332)
.+.+++.+|+|++....|.+
T Consensus 72 iekai~eadlvfisvntptk 91 (481)
T KOG2666|consen 72 IEKAIKEADLVFISVNTPTK 91 (481)
T ss_pred hHHHhhhcceEEEEecCCcc
Confidence 99999999999998766543
No 404
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=96.17 E-value=0.013 Score=46.53 Aligned_cols=72 Identities=25% Similarity=0.304 Sum_probs=44.5
Q ss_pred cEEEEEcCCChhHHHHHHHHHh-cccCCCCCCeE-EEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 6 LRVLVTGAAGQIGYALVPMIAR-GIMLGPDQPVI-LHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~-~~~~~~~~~~~-i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
|||.|+|++|.+|+.++..+.+ .++ + +..+|.+.+ ...+ .|+.+........+....++.+.+..+|
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~-------~lv~~v~~~~~--~~~g--~d~g~~~~~~~~~~~v~~~l~~~~~~~D 69 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGF-------ELVGAVDRKPS--AKVG--KDVGELAGIGPLGVPVTDDLEELLEEAD 69 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTE-------EEEEEEETTTS--TTTT--SBCHHHCTSST-SSBEBS-HHHHTTH-S
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCc-------EEEEEEecCCc--cccc--chhhhhhCcCCcccccchhHHHhcccCC
Confidence 5899999889999999999988 443 4 455666431 1111 2333221111334555678888888899
Q ss_pred EEEEe
Q 019990 84 IAVMV 88 (332)
Q Consensus 84 iVi~~ 88 (332)
+||-.
T Consensus 70 VvIDf 74 (124)
T PF01113_consen 70 VVIDF 74 (124)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 98865
No 405
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=96.14 E-value=0.014 Score=55.46 Aligned_cols=53 Identities=15% Similarity=0.255 Sum_probs=42.3
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcE
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNI 84 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDi 84 (332)
+++|+|+||.|.+|..++..|...|+ +|.++|++.. .+..+++++||+
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~-------~V~~~d~~~~-------------------------~~~~~~~~~aDl 145 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGY-------QVRILEQDDW-------------------------DRAEDILADAGM 145 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCC-------eEEEeCCCcc-------------------------hhHHHHHhcCCE
Confidence 47899999889999999999998876 8999996310 123456789999
Q ss_pred EEEec
Q 019990 85 AVMVG 89 (332)
Q Consensus 85 Vi~~a 89 (332)
||.+.
T Consensus 146 Vilav 150 (374)
T PRK11199 146 VIVSV 150 (374)
T ss_pred EEEeC
Confidence 99874
No 406
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.06 E-value=0.043 Score=44.82 Aligned_cols=75 Identities=15% Similarity=0.116 Sum_probs=47.6
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
+.++|+|+| +|.+|..++..|.+.+. .++.++|++. ++......++... . ... ...+..+.++++|
T Consensus 18 ~~~~i~iiG-~G~~g~~~a~~l~~~g~------~~v~v~~r~~--~~~~~~~~~~~~~---~-~~~-~~~~~~~~~~~~D 83 (155)
T cd01065 18 KGKKVLILG-AGGAARAVAYALAELGA------AKIVIVNRTL--EKAKALAERFGEL---G-IAI-AYLDLEELLAEAD 83 (155)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCC------CEEEEEcCCH--HHHHHHHHHHhhc---c-cce-eecchhhccccCC
Confidence 467899999 59999999999987652 2799999853 2233222222110 0 001 1234555578999
Q ss_pred EEEEecCCC
Q 019990 84 IAVMVGGFP 92 (332)
Q Consensus 84 iVi~~ag~~ 92 (332)
+||.+....
T Consensus 84 vvi~~~~~~ 92 (155)
T cd01065 84 LIINTTPVG 92 (155)
T ss_pred EEEeCcCCC
Confidence 999987543
No 407
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=96.03 E-value=0.025 Score=51.17 Aligned_cols=73 Identities=22% Similarity=0.290 Sum_probs=44.6
Q ss_pred CC-CCCcEEEEEcCCChhHHHHHHHHHhc-ccCCCCCCeEEE-EEecccchhhhhhhHhhhhhhccCCccceEEeCCHHH
Q 019990 1 MA-KNPLRVLVTGAAGQIGYALVPMIARG-IMLGPDQPVILH-MLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVE 77 (332)
Q Consensus 1 m~-~~~~kI~VtGaaG~IGs~l~~~L~~~-~~~~~~~~~~i~-l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~ 77 (332)
|+ +.++||+|+| +|.||+.++..|... .- .++. ++|.+. ++.......+. ......++.+
T Consensus 1 ~~~m~~irIGIIG-~G~IG~~~a~~L~~~~~~------~el~aV~dr~~--~~a~~~a~~~g--------~~~~~~~~ee 63 (271)
T PRK13302 1 MSSRPELRVAIAG-LGAIGKAIAQALDRGLPG------LTLSAVAVRDP--QRHADFIWGLR--------RPPPVVPLDQ 63 (271)
T ss_pred CCCCCeeEEEEEC-ccHHHHHHHHHHHhcCCC------eEEEEEECCCH--HHHHHHHHhcC--------CCcccCCHHH
Confidence 44 3468999999 799999999988763 11 2554 677643 22221111110 0112345666
Q ss_pred HhCCCcEEEEecC
Q 019990 78 ACKDVNIAVMVGG 90 (332)
Q Consensus 78 a~~~aDiVi~~ag 90 (332)
.+.++|+|+.++.
T Consensus 64 ll~~~D~Vvi~tp 76 (271)
T PRK13302 64 LATHADIVVEAAP 76 (271)
T ss_pred HhcCCCEEEECCC
Confidence 6788999999864
No 408
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.01 E-value=0.068 Score=49.07 Aligned_cols=64 Identities=14% Similarity=0.175 Sum_probs=42.9
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCC---C
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKD---V 82 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~---a 82 (332)
|||+|+| .|.+|++++..|.+.++ +|.++|++. ++.. .+.+. ......+..+.+++ +
T Consensus 1 m~Ig~IG-lG~mG~~mA~~L~~~g~-------~v~v~dr~~--~~~~----~~~~~------g~~~~~s~~~~~~~~~~a 60 (299)
T PRK12490 1 MKLGLIG-LGKMGGNMAERLREDGH-------EVVGYDVNQ--EAVD----VAGKL------GITARHSLEELVSKLEAP 60 (299)
T ss_pred CEEEEEc-ccHHHHHHHHHHHhCCC-------EEEEEECCH--HHHH----HHHHC------CCeecCCHHHHHHhCCCC
Confidence 3799999 79999999999998775 788999853 2222 12211 12233455555554 6
Q ss_pred cEEEEec
Q 019990 83 NIAVMVG 89 (332)
Q Consensus 83 DiVi~~a 89 (332)
|+|+++.
T Consensus 61 dvVi~~v 67 (299)
T PRK12490 61 RTIWVMV 67 (299)
T ss_pred CEEEEEe
Confidence 8988863
No 409
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=95.99 E-value=0.038 Score=45.77 Aligned_cols=57 Identities=18% Similarity=0.280 Sum_probs=41.4
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
+.++|+|+|.++.+|..++..|.+.+. .+.+.+... .++.+.++.||
T Consensus 35 ~Gk~v~VvGrs~~VG~Pla~lL~~~~a-------tVt~~h~~T--------------------------~~l~~~~~~AD 81 (160)
T PF02882_consen 35 EGKKVVVVGRSNIVGKPLAMLLLNKGA-------TVTICHSKT--------------------------KNLQEITRRAD 81 (160)
T ss_dssp TT-EEEEE-TTTTTHHHHHHHHHHTT--------EEEEE-TTS--------------------------SSHHHHHTTSS
T ss_pred CCCEEEEECCcCCCChHHHHHHHhCCC-------eEEeccCCC--------------------------Ccccceeeecc
Confidence 468999999988999999999998764 777776531 35567788999
Q ss_pred EEEEecCCCC
Q 019990 84 IAVMVGGFPR 93 (332)
Q Consensus 84 iVi~~ag~~~ 93 (332)
+||..+|.+.
T Consensus 82 IVVsa~G~~~ 91 (160)
T PF02882_consen 82 IVVSAVGKPN 91 (160)
T ss_dssp EEEE-SSSTT
T ss_pred EEeeeecccc
Confidence 9999888653
No 410
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=95.98 E-value=0.021 Score=52.16 Aligned_cols=63 Identities=24% Similarity=0.377 Sum_probs=45.0
Q ss_pred EEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcEEE
Q 019990 7 RVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAV 86 (332)
Q Consensus 7 kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDiVi 86 (332)
||+|+| .|.+|+.++..|+..++ +|.++|++. ++.. .+... ......+..++++++|+||
T Consensus 1 ~IgvIG-~G~mG~~iA~~l~~~G~-------~V~~~dr~~--~~~~----~~~~~------g~~~~~~~~~~~~~aDivi 60 (291)
T TIGR01505 1 KVGFIG-LGIMGSPMSINLAKAGY-------QLHVTTIGP--EVAD----ELLAA------GAVTAETARQVTEQADVIF 60 (291)
T ss_pred CEEEEE-ecHHHHHHHHHHHHCCC-------eEEEEcCCH--HHHH----HHHHC------CCcccCCHHHHHhcCCEEE
Confidence 589999 79999999999998875 899999853 2222 12211 1122345667889999999
Q ss_pred Eec
Q 019990 87 MVG 89 (332)
Q Consensus 87 ~~a 89 (332)
.+.
T Consensus 61 ~~v 63 (291)
T TIGR01505 61 TMV 63 (291)
T ss_pred Eec
Confidence 974
No 411
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=95.97 E-value=0.15 Score=46.06 Aligned_cols=158 Identities=15% Similarity=0.167 Sum_probs=90.0
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc------CCccceEEeCCHHH
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF------PLLKGVVATTDVVE 77 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~------~~~~~v~~~~~~~~ 77 (332)
..+.++||||+.-||.+++..|.+.|- .+++.+++. +.+.....++..... ....|++...+..+
T Consensus 7 ~gkvalVTG~s~GIG~aia~~la~~Ga-------~v~i~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~ 77 (270)
T KOG0725|consen 7 AGKVALVTGGSSGIGKAIALLLAKAGA-------KVVITGRSE--ERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEK 77 (270)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHH
Confidence 456788999999999999999999885 899999864 344444444432211 11234432222111
Q ss_pred -------H-hCCCcEEEEecCCCCCC----CCCh---hHHHhhhHH-HHHHHHHHHHhhcC--CCcEEEEEeCChhhHHH
Q 019990 78 -------A-CKDVNIAVMVGGFPRKE----GMER---KDVMSKNVS-IYKAQASALEKHAA--PNCKVLVVANPANTNAL 139 (332)
Q Consensus 78 -------a-~~~aDiVi~~ag~~~~~----~~~~---~~~~~~N~~-~~~~i~~~i~~~~~--~~~~viv~snp~~~~~~ 139 (332)
. +-..|++|.-||..... +.+. +..+..|+. .+..+...+..... ....+++.|......
T Consensus 78 l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~-- 155 (270)
T KOG0725|consen 78 LVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVG-- 155 (270)
T ss_pred HHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEecccccc--
Confidence 1 34589999999874322 1222 234566777 35455444444431 234555555432210
Q ss_pred HHHHHCCCCCCCcEEEeecccHHHHHHHHHHHcCCCCCCee
Q 019990 140 ILKEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVK 180 (332)
Q Consensus 140 ~~~~~~~~~~~~~i~~~t~l~~~r~~~~~a~~~~v~~~~v~ 180 (332)
...+....|+.++-....+.+.+|..+. +..+|
T Consensus 156 ------~~~~~~~~Y~~sK~al~~ltr~lA~El~--~~gIR 188 (270)
T KOG0725|consen 156 ------PGPGSGVAYGVSKAALLQLTRSLAKELA--KHGIR 188 (270)
T ss_pred ------CCCCCcccchhHHHHHHHHHHHHHHHHh--hcCcE
Confidence 1122224678888777888877777655 34455
No 412
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=95.90 E-value=0.033 Score=47.00 Aligned_cols=66 Identities=21% Similarity=0.135 Sum_probs=45.6
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
..++|+|+| .|.||+.++..|..-|. +|..+|...... . ...+. .+ ...++.+.++.||
T Consensus 35 ~g~tvgIiG-~G~IG~~vA~~l~~fG~-------~V~~~d~~~~~~----~--~~~~~------~~-~~~~l~ell~~aD 93 (178)
T PF02826_consen 35 RGKTVGIIG-YGRIGRAVARRLKAFGM-------RVIGYDRSPKPE----E--GADEF------GV-EYVSLDELLAQAD 93 (178)
T ss_dssp TTSEEEEES-TSHHHHHHHHHHHHTT--------EEEEEESSCHHH----H--HHHHT------TE-EESSHHHHHHH-S
T ss_pred CCCEEEEEE-EcCCcCeEeeeeecCCc-------eeEEecccCChh----h--hcccc------cc-eeeehhhhcchhh
Confidence 357999999 79999999999998775 899999864211 0 01111 12 2457888899999
Q ss_pred EEEEecC
Q 019990 84 IAVMVGG 90 (332)
Q Consensus 84 iVi~~ag 90 (332)
+|+.+..
T Consensus 94 iv~~~~p 100 (178)
T PF02826_consen 94 IVSLHLP 100 (178)
T ss_dssp EEEE-SS
T ss_pred hhhhhhc
Confidence 9998753
No 413
>KOG2711 consensus Glycerol-3-phosphate dehydrogenase/dihydroxyacetone 3-phosphate reductase [Energy production and conversion]
Probab=95.89 E-value=0.24 Score=45.54 Aligned_cols=105 Identities=26% Similarity=0.432 Sum_probs=60.5
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcc----cCCCCCCeEEEEEecccch--hhhhhhHhhhhhhccC------CccceEE
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGI----MLGPDQPVILHMLDIEPAA--EALNGVKMELIDAAFP------LLKGVVA 71 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~----~~~~~~~~~i~l~D~~~~~--~~~~~~~~dl~~~~~~------~~~~v~~ 71 (332)
.+.||+|+| +|.=|++++..+..+- .+. ..++...++..-.. +++.. ...-.|.+.. +..++..
T Consensus 20 ~~~kV~ivG-sGnWGsaiaki~~~n~~~~~~f~--~~Vrmwv~ee~i~~~~~~L~e-iIN~~heN~KYlpg~~lP~NvvA 95 (372)
T KOG2711|consen 20 DPLKVCIVG-SGNWGSAIAKIVGENVKEFPIFD--PQVRMWVFEEEINGEAEKLTE-IINSRHENVKYLPGIKLPENVVA 95 (372)
T ss_pred CceEEEEEc-cChHHHHHHHHHhhhhhhccccC--ceeeEEEeccccCChhHHHHH-HhccccccccccCCccCCCCeEe
Confidence 468999999 7999999998876531 121 12233334322111 11111 1111222221 2357888
Q ss_pred eCCHHHHhCCCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEE
Q 019990 72 TTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVL 128 (332)
Q Consensus 72 ~~~~~~a~~~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~vi 128 (332)
.+|+.++++|||++|+.- |. +.+..+.+.+..+-.|++..|
T Consensus 96 v~dl~ea~~dADilvf~v--Ph--------------Qf~~~ic~~l~g~vk~~~~aI 136 (372)
T KOG2711|consen 96 VPDLVEAAKDADILVFVV--PH--------------QFIPRICEQLKGYVKPGATAI 136 (372)
T ss_pred cchHHHHhccCCEEEEeC--Ch--------------hhHHHHHHHHhcccCCCCeEE
Confidence 889999999999999862 22 224456777777655555543
No 414
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=95.89 E-value=0.049 Score=63.11 Aligned_cols=35 Identities=17% Similarity=0.136 Sum_probs=28.7
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecc
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIE 45 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~ 45 (332)
.+.++||||++.||..++..|++.+- .+++|++++
T Consensus 1997 g~vvLVTGGarGIG~aiA~~LA~~~g------a~viL~gRs 2031 (2582)
T TIGR02813 1997 DDVFLVTGGAKGVTFECALELAKQCQ------AHFILAGRS 2031 (2582)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhcC------CEEEEEeCC
Confidence 45799999999999999999987631 178888875
No 415
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=95.84 E-value=0.033 Score=52.20 Aligned_cols=73 Identities=19% Similarity=0.262 Sum_probs=43.3
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
+++||+|+||+|++|..++..|...++- ..++..+.... ..|...+.. . .++....-..+++.++|
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP----~~~l~~las~r----saGk~~~~~-----~-~~~~v~~~~~~~~~~~D 71 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFP----YSSLKMLASAR----SAGKKVTFE-----G-RDYTVEELTEDSFDGVD 71 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCC----cceEEEEEccC----CCCCeeeec-----C-ceeEEEeCCHHHHcCCC
Confidence 5689999999999999999988775431 12666554321 112211111 0 12222211134568899
Q ss_pred EEEEecC
Q 019990 84 IAVMVGG 90 (332)
Q Consensus 84 iVi~~ag 90 (332)
+||++++
T Consensus 72 ~vf~a~p 78 (344)
T PLN02383 72 IALFSAG 78 (344)
T ss_pred EEEECCC
Confidence 9998764
No 416
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=95.80 E-value=0.04 Score=50.03 Aligned_cols=116 Identities=16% Similarity=0.196 Sum_probs=70.9
Q ss_pred EEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhcc---C-CccceEEe----CCHHHHh
Q 019990 8 VLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAF---P-LLKGVVAT----TDVVEAC 79 (332)
Q Consensus 8 I~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~---~-~~~~v~~~----~~~~~a~ 79 (332)
..||||+..||..++..|+.+|+ .++|+.+.. +++.....|+.+... . ...|++.. +.+.+.+
T Consensus 52 AVVTGaTDGIGKayA~eLAkrG~-------nvvLIsRt~--~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l 122 (312)
T KOG1014|consen 52 AVVTGATDGIGKAYARELAKRGF-------NVVLISRTQ--EKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKL 122 (312)
T ss_pred EEEECCCCcchHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHh
Confidence 56899999999999999999997 899999864 578777777755321 0 11233222 2244556
Q ss_pred CCCc--EEEEecCCCCC-CC----CCh---hHHHhhhH----HHHHHHHHHHHhhcCCCcEEEEEeCCh
Q 019990 80 KDVN--IAVMVGGFPRK-EG----MER---KDVMSKNV----SIYKAQASALEKHAAPNCKVLVVANPA 134 (332)
Q Consensus 80 ~~aD--iVi~~ag~~~~-~~----~~~---~~~~~~N~----~~~~~i~~~i~~~~~~~~~viv~snp~ 134 (332)
.+-| +.|..+|.... |. .+. .+.+..|+ ..++-++..+.+- +.+.+++.++..
T Consensus 123 ~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r--~~G~IvnigS~a 189 (312)
T KOG1014|consen 123 AGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVER--KKGIIVNIGSFA 189 (312)
T ss_pred cCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcC--CCceEEEecccc
Confidence 6555 57777776432 11 111 12233343 3456666667663 356777777543
No 417
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=95.77 E-value=0.035 Score=52.23 Aligned_cols=74 Identities=15% Similarity=0.169 Sum_probs=42.3
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcE
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNI 84 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDi 84 (332)
|++|+|+||+|.+|+.+..+|+....+.. .+++++.... ..+....+... ...+....+ .+.++++|+
T Consensus 1 m~~VAIVGATG~vG~ell~llL~~~~f~~---~~l~~~ss~~----sg~~~~~f~g~----~~~v~~~~~-~~~~~~~Di 68 (369)
T PRK06598 1 MKKVGFVGWRGMVGSVLMQRMVEENDFDL---IEPVFFSTSQ----AGGAAPSFGGK----EGTLQDAFD-IDALKKLDI 68 (369)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHhCCCCCc---CcEEEecchh----hCCcccccCCC----cceEEecCC-hhHhcCCCE
Confidence 36899999999999999987776554321 2466665421 12211111110 001111122 245688999
Q ss_pred EEEecC
Q 019990 85 AVMVGG 90 (332)
Q Consensus 85 Vi~~ag 90 (332)
||++++
T Consensus 69 vf~a~~ 74 (369)
T PRK06598 69 IITCQG 74 (369)
T ss_pred EEECCC
Confidence 999764
No 418
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=95.75 E-value=0.1 Score=47.91 Aligned_cols=33 Identities=21% Similarity=0.333 Sum_probs=29.0
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEeccc
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEP 46 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~ 46 (332)
|||+|+| .|.+|+.++..|+..++ +|.++|++.
T Consensus 1 m~Ig~IG-lG~MG~~mA~~L~~~g~-------~v~v~dr~~ 33 (301)
T PRK09599 1 MQLGMIG-LGRMGGNMARRLLRGGH-------EVVGYDRNP 33 (301)
T ss_pred CEEEEEc-ccHHHHHHHHHHHHCCC-------eEEEEECCH
Confidence 4799999 79999999999998875 899999853
No 419
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=95.73 E-value=0.023 Score=47.34 Aligned_cols=106 Identities=11% Similarity=0.093 Sum_probs=63.4
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCC
Q 019990 3 KNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDV 82 (332)
Q Consensus 3 ~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (332)
+++|...|.||+|-+|+-+..++.+.+.++ .|+++-+++.-+...+... . ....++.--.++.++.++.
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FS-----KV~~i~RR~~~d~at~k~v--~----q~~vDf~Kl~~~a~~~qg~ 84 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFS-----KVYAILRRELPDPATDKVV--A----QVEVDFSKLSQLATNEQGP 84 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhcccce-----eEEEEEeccCCCcccccee--e----eEEechHHHHHHHhhhcCC
Confidence 457789999999999999999999988775 7877776521100000000 0 0011222223455667899
Q ss_pred cEEEEecCCCC-CCCCChhHHHhhhHHHHHHHHHHHHhhc
Q 019990 83 NIAVMVGGFPR-KEGMERKDVMSKNVSIYKAQASALEKHA 121 (332)
Q Consensus 83 DiVi~~ag~~~-~~~~~~~~~~~~N~~~~~~i~~~i~~~~ 121 (332)
|+.+.+-|..| +.|-+ .+++..-+.....++.++..+
T Consensus 85 dV~FcaLgTTRgkaGad--gfykvDhDyvl~~A~~AKe~G 122 (238)
T KOG4039|consen 85 DVLFCALGTTRGKAGAD--GFYKVDHDYVLQLAQAAKEKG 122 (238)
T ss_pred ceEEEeecccccccccC--ceEeechHHHHHHHHHHHhCC
Confidence 99988766544 33322 234444555666677776654
No 420
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=95.68 E-value=0.045 Score=51.49 Aligned_cols=33 Identities=27% Similarity=0.404 Sum_probs=27.2
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEe
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLD 43 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D 43 (332)
++||+|+||+|++|+.++..|..... .+++.+.
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~~p~------~el~~~~ 35 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLANHPW------FEVTALA 35 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHcCCC------ceEEEEE
Confidence 57999999999999999998886543 2777773
No 421
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=95.66 E-value=0.082 Score=49.19 Aligned_cols=74 Identities=20% Similarity=0.192 Sum_probs=50.0
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
+..+++|+| +|..|.+.+..|...... .+|.++|++. ++......++.+. ...+....+..+++++||
T Consensus 127 ~~~~lgiiG-~G~qA~~~l~al~~~~~~-----~~v~V~~r~~--~~~~~~~~~~~~~----g~~v~~~~~~~eav~~aD 194 (325)
T TIGR02371 127 DSSVLGIIG-AGRQAWTQLEALSRVFDL-----EEVSVYCRTP--STREKFALRASDY----EVPVRAATDPREAVEGCD 194 (325)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhcCCC-----CEEEEECCCH--HHHHHHHHHHHhh----CCcEEEeCCHHHHhccCC
Confidence 457899999 799999877776553222 3899999864 3444333333321 113455678889999999
Q ss_pred EEEEec
Q 019990 84 IAVMVG 89 (332)
Q Consensus 84 iVi~~a 89 (332)
+|+.+-
T Consensus 195 iVitaT 200 (325)
T TIGR02371 195 ILVTTT 200 (325)
T ss_pred EEEEec
Confidence 999754
No 422
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=95.65 E-value=0.039 Score=49.52 Aligned_cols=67 Identities=25% Similarity=0.334 Sum_probs=42.4
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEE-EEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVIL-HMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i-~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
|+||+|+|++|.+|+.++..+.+..-+ ++ .++|.+.. ..... . ..++....++.+.++++|
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~------elvav~d~~~~--~~~~~----~------~~~i~~~~dl~~ll~~~D 62 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAAEDL------ELVAAVDRPGS--PLVGQ----G------ALGVAITDDLEAVLADAD 62 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCC------EEEEEEecCCc--ccccc----C------CCCccccCCHHHhccCCC
Confidence 479999997799999999887754211 44 45776431 11111 1 112334567777777899
Q ss_pred EEEEec
Q 019990 84 IAVMVG 89 (332)
Q Consensus 84 iVi~~a 89 (332)
+||.+.
T Consensus 63 vVid~t 68 (257)
T PRK00048 63 VLIDFT 68 (257)
T ss_pred EEEECC
Confidence 998664
No 423
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut
Probab=95.64 E-value=0.038 Score=49.11 Aligned_cols=112 Identities=14% Similarity=0.165 Sum_probs=66.3
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhccc----CCCCCCeEEEEEecccchhhhhhhHhhhhhhccC---CccceEEeCCHHH
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIM----LGPDQPVILHMLDIEPAAEALNGVKMELIDAAFP---LLKGVVATTDVVE 77 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~----~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~ 77 (332)
..||++.| +|..|..++..|+..+. ...+-..++.++|... .+.....++.....+ +..+-....++.+
T Consensus 25 d~riv~~G-AGsAg~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~G---ll~~~r~~l~~~~~~~~~~~~~~~~~~~L~e 100 (254)
T cd00762 25 EHKVLFNG-AGAAALGIANLIVXLXVKEGISKEEACKRIWXVDRKG---LLVKNRKETCPNEYHLARFANPERESGDLED 100 (254)
T ss_pred hcEEEEEC-cCHHHHHHHHHHHHHHHhcCCCHHHHhccEEEECCCC---eEeCCCCccCHHHHHHHHHcCcccccCCHHH
Confidence 46899999 69999999998876432 1111123789999754 111111111110001 1111122358899
Q ss_pred HhC--CCcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChh
Q 019990 78 ACK--DVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPAN 135 (332)
Q Consensus 78 a~~--~aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~ 135 (332)
+++ ++|++|=+.+.+ | . .++++++.+.+++ +..+|+-.|||..
T Consensus 101 av~~~kptvlIG~S~~~---g-----~------ft~evv~~Ma~~~-~~PIIFaLSNPt~ 145 (254)
T cd00762 101 AVEAAKPDFLIGVSRVG---G-----A------FTPEVIRAXAEIN-ERPVIFALSNPTS 145 (254)
T ss_pred HHHhhCCCEEEEeCCCC---C-----C------CCHHHHHHHhhcC-CCCEEEECCCcCC
Confidence 999 999988665433 2 1 1246777788776 5667777899963
No 424
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.61 E-value=0.074 Score=51.69 Aligned_cols=79 Identities=25% Similarity=0.270 Sum_probs=49.6
Q ss_pred CCCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhC
Q 019990 1 MAKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACK 80 (332)
Q Consensus 1 m~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~ 80 (332)
|..+.++|+|+|+ |.+|..++..|+..|. +|+++|.... +.+.....++.... ..+.......+...
T Consensus 1 ~~~~~k~v~iiG~-g~~G~~~A~~l~~~G~-------~V~~~d~~~~-~~~~~~~~~l~~~~----~~~~~~~~~~~~~~ 67 (450)
T PRK14106 1 MELKGKKVLVVGA-GVSGLALAKFLKKLGA-------KVILTDEKEE-DQLKEALEELGELG----IELVLGEYPEEFLE 67 (450)
T ss_pred CCcCCCEEEEECC-CHHHHHHHHHHHHCCC-------EEEEEeCCch-HHHHHHHHHHHhcC----CEEEeCCcchhHhh
Confidence 5556789999995 7799999999999886 8999998532 12222222232111 11211111123456
Q ss_pred CCcEEEEecCCC
Q 019990 81 DVNIAVMVGGFP 92 (332)
Q Consensus 81 ~aDiVi~~ag~~ 92 (332)
++|+||..+|.+
T Consensus 68 ~~d~vv~~~g~~ 79 (450)
T PRK14106 68 GVDLVVVSPGVP 79 (450)
T ss_pred cCCEEEECCCCC
Confidence 799999998874
No 425
>PRK15059 tartronate semialdehyde reductase; Provisional
Probab=95.61 E-value=0.041 Score=50.41 Aligned_cols=63 Identities=22% Similarity=0.369 Sum_probs=44.2
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcEE
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIA 85 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDiV 85 (332)
|||+++| .|.+|+.++..|++.++ ++.++|++.. .. ++... ......+..++.+++|+|
T Consensus 1 m~Ig~IG-lG~MG~~ma~~L~~~G~-------~v~v~~~~~~---~~----~~~~~------g~~~~~s~~~~~~~advV 59 (292)
T PRK15059 1 MKLGFIG-LGIMGTPMAINLARAGH-------QLHVTTIGPV---AD----ELLSL------GAVSVETARQVTEASDII 59 (292)
T ss_pred CeEEEEc-cCHHHHHHHHHHHHCCC-------eEEEEeCCHh---HH----HHHHc------CCeecCCHHHHHhcCCEE
Confidence 3799999 89999999999998886 7888887531 11 12111 122234566777899999
Q ss_pred EEec
Q 019990 86 VMVG 89 (332)
Q Consensus 86 i~~a 89 (332)
|++.
T Consensus 60 i~~v 63 (292)
T PRK15059 60 FIMV 63 (292)
T ss_pred EEeC
Confidence 9874
No 426
>PLN02712 arogenate dehydrogenase
Probab=95.59 E-value=0.32 Score=49.75 Aligned_cols=65 Identities=14% Similarity=0.190 Sum_probs=44.0
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHh-CCC
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEAC-KDV 82 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~-~~a 82 (332)
+++||+|+| .|.+|..++..|.+.|+ +|..+|++.. . .... .. .+....+..+.+ +++
T Consensus 51 ~~~kIgIIG-~G~mG~slA~~L~~~G~-------~V~~~dr~~~--~--~~A~---~~------Gv~~~~d~~e~~~~~a 109 (667)
T PLN02712 51 TQLKIAIIG-FGNYGQFLAKTLISQGH-------TVLAHSRSDH--S--LAAR---SL------GVSFFLDPHDLCERHP 109 (667)
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHHCCC-------EEEEEeCCHH--H--HHHH---Hc------CCEEeCCHHHHhhcCC
Confidence 358999999 79999999999988774 7888997521 1 1111 11 122344555544 579
Q ss_pred cEEEEec
Q 019990 83 NIAVMVG 89 (332)
Q Consensus 83 DiVi~~a 89 (332)
|+||++.
T Consensus 110 DvViLav 116 (667)
T PLN02712 110 DVILLCT 116 (667)
T ss_pred CEEEEcC
Confidence 9999874
No 427
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=95.57 E-value=0.033 Score=51.44 Aligned_cols=36 Identities=25% Similarity=0.336 Sum_probs=29.6
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIE 45 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~ 45 (332)
+|+||+|+||+|+.|..|...|..... .|+.++..+
T Consensus 1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~------ve~~~~ss~ 36 (349)
T COG0002 1 MMIKVGIVGASGYTGLELLRLLAGHPD------VELILISSR 36 (349)
T ss_pred CCceEEEEcCCCCcHHHHHHHHhcCCC------eEEEEeech
Confidence 368999999999999999999987654 377777754
No 428
>PRK08818 prephenate dehydrogenase; Provisional
Probab=95.56 E-value=0.16 Score=48.07 Aligned_cols=58 Identities=14% Similarity=0.141 Sum_probs=42.5
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCC
Q 019990 3 KNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDV 82 (332)
Q Consensus 3 ~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (332)
+..+||+|+|.+|-+|..++..|.+.. + .+|+.+|... + ...+..+.+++|
T Consensus 2 ~~~~~I~IIGl~GliGgslA~alk~~~--~----~~V~g~D~~d--~---------------------~~~~~~~~v~~a 52 (370)
T PRK08818 2 IAQPVVGIVGSAGAYGRWLARFLRTRM--Q----LEVIGHDPAD--P---------------------GSLDPATLLQRA 52 (370)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhcC--C----CEEEEEcCCc--c---------------------ccCCHHHHhcCC
Confidence 456799999966999999999998641 1 2788888631 0 012445678899
Q ss_pred cEEEEec
Q 019990 83 NIAVMVG 89 (332)
Q Consensus 83 DiVi~~a 89 (332)
|+||++.
T Consensus 53 DlVilav 59 (370)
T PRK08818 53 DVLIFSA 59 (370)
T ss_pred CEEEEeC
Confidence 9999974
No 429
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=95.56 E-value=0.12 Score=52.33 Aligned_cols=140 Identities=14% Similarity=0.142 Sum_probs=80.3
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccC-CccceEEeCCHHHH-hCCC
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFP-LLKGVVATTDVVEA-CKDV 82 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~-~~~~v~~~~~~~~a-~~~a 82 (332)
..+|.|+| .|.+|++++..|.+.++ +++++|.++ ++.+ .+.+...+ +.+|.+..+-++++ +.+|
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~~~g~-------~vvvID~d~--~~v~----~~~~~g~~v~~GDat~~~~L~~agi~~A 465 (601)
T PRK03659 400 KPQVIIVG-FGRFGQVIGRLLMANKM-------RITVLERDI--SAVN----LMRKYGYKVYYGDATQLELLRAAGAEKA 465 (601)
T ss_pred cCCEEEec-CchHHHHHHHHHHhCCC-------CEEEEECCH--HHHH----HHHhCCCeEEEeeCCCHHHHHhcCCccC
Confidence 35899999 79999999999988776 799999864 2222 22222111 12344333333333 5689
Q ss_pred cEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEe-CChhhHHHHHHHHCCCCCCCcEEEeecccH
Q 019990 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVA-NPANTNALILKEFAPSIPAKNITCLTRLDH 161 (332)
Q Consensus 83 DiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~s-np~~~~~~~~~~~~~~~~~~~i~~~t~l~~ 161 (332)
|.||.+-+. + ..|. .++..+++.. |+.+++.-+ |+.+ ...+.+ ...+.++--+...+
T Consensus 466 ~~vv~~~~d------~-----~~n~----~i~~~~r~~~-p~~~IiaRa~~~~~--~~~L~~----~Ga~~vv~e~~es~ 523 (601)
T PRK03659 466 EAIVITCNE------P-----EDTM----KIVELCQQHF-PHLHILARARGRVE--AHELLQ----AGVTQFSRETFSSA 523 (601)
T ss_pred CEEEEEeCC------H-----HHHH----HHHHHHHHHC-CCCeEEEEeCCHHH--HHHHHh----CCCCEEEccHHHHH
Confidence 998887321 1 2233 3455677775 777766544 4433 233343 22333444444445
Q ss_pred HHHHHHHHHHcCCCCCCee
Q 019990 162 NRAMGQISERLKVHVSDVK 180 (332)
Q Consensus 162 ~r~~~~~a~~~~v~~~~v~ 180 (332)
.++....-+.+|+++..++
T Consensus 524 l~l~~~~L~~lg~~~~~~~ 542 (601)
T PRK03659 524 LELGRKTLVSLGMHPHQAQ 542 (601)
T ss_pred HHHHHHHHHHcCCCHHHHH
Confidence 5555555566777766654
No 430
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=95.56 E-value=0.12 Score=46.88 Aligned_cols=68 Identities=18% Similarity=0.370 Sum_probs=42.1
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhh-hhHhhhhhhccCCccceEEeCCH-HHHhCCC
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALN-GVKMELIDAAFPLLKGVVATTDV-VEACKDV 82 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~-~~~~dl~~~~~~~~~~v~~~~~~-~~a~~~a 82 (332)
+++|+|+| .|.+|..++..|...++ .+.+++.+.+...+. +...++.+ ....+. .++.+++
T Consensus 3 ~~~v~IvG-~GliG~s~a~~l~~~g~-------~v~i~g~d~~~~~~~~a~~lgv~d---------~~~~~~~~~~~~~a 65 (279)
T COG0287 3 SMKVGIVG-LGLMGGSLARALKEAGL-------VVRIIGRDRSAATLKAALELGVID---------ELTVAGLAEAAAEA 65 (279)
T ss_pred CcEEEEEC-CchHHHHHHHHHHHcCC-------eEEEEeecCcHHHHHHHhhcCccc---------ccccchhhhhcccC
Confidence 56899999 89999999999999886 555666543221111 11111111 111222 5667889
Q ss_pred cEEEEec
Q 019990 83 NIAVMVG 89 (332)
Q Consensus 83 DiVi~~a 89 (332)
|+||++.
T Consensus 66 D~Vivav 72 (279)
T COG0287 66 DLVIVAV 72 (279)
T ss_pred CEEEEec
Confidence 9999873
No 431
>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e.g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B ....
Probab=95.55 E-value=0.021 Score=50.76 Aligned_cols=112 Identities=16% Similarity=0.234 Sum_probs=65.0
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhc----ccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCc---cceEEeCCHHH
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARG----IMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLL---KGVVATTDVVE 77 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~----~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~---~~v~~~~~~~~ 77 (332)
..||++.| +|..|-.++..|... |+...+-..++.++|.+. .+.....|+.+...++. .......++.+
T Consensus 25 d~riv~~G-AGsAg~gia~ll~~~~~~~G~~~~eA~~~i~lvD~~G---ll~~~r~~l~~~~~~~a~~~~~~~~~~~L~e 100 (255)
T PF03949_consen 25 DQRIVFFG-AGSAGIGIARLLVAAMVREGLSEEEARKRIWLVDSKG---LLTDDREDLNPHKKPFARKTNPEKDWGSLLE 100 (255)
T ss_dssp G-EEEEEB--SHHHHHHHHHHHHHHHCTTS-HHHHHTTEEEEETTE---EEBTTTSSHSHHHHHHHBSSSTTT--SSHHH
T ss_pred HcEEEEeC-CChhHHHHHHHHHHHHHHhcCCHHHHhccEEEEeccc---eEeccCccCChhhhhhhccCcccccccCHHH
Confidence 35899999 699999999988765 652000012799999764 12211223322111111 11111258899
Q ss_pred HhCCC--cEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChh
Q 019990 78 ACKDV--NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPAN 135 (332)
Q Consensus 78 a~~~a--DiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~ 135 (332)
+++++ |++|=+.+.+.. ..+++++.+.+++ +..+|+-.|||..
T Consensus 101 av~~~kPtvLIG~S~~~g~--------------ft~evv~~Ma~~~-erPIIF~LSNPt~ 145 (255)
T PF03949_consen 101 AVKGAKPTVLIGLSGQGGA--------------FTEEVVRAMAKHN-ERPIIFPLSNPTP 145 (255)
T ss_dssp HHHCH--SEEEECSSSTTS--------------S-HHHHHHCHHHS-SSEEEEE-SSSCG
T ss_pred HHHhcCCCEEEEecCCCCc--------------CCHHHHHHHhccC-CCCEEEECCCCCC
Confidence 99988 998876553321 1357778888886 5656777899964
No 432
>PRK06476 pyrroline-5-carboxylate reductase; Reviewed
Probab=95.54 E-value=0.05 Score=48.78 Aligned_cols=69 Identities=12% Similarity=0.108 Sum_probs=44.2
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcEE
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIA 85 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDiV 85 (332)
|||+|+| +|.+|++++..|.+.++. ...+.++|++. ++.. .+... + ..+....+..+.++++|+|
T Consensus 1 m~IgiIG-~G~mG~aia~~L~~~g~~----~~~i~v~~r~~--~~~~----~l~~~---~-~~~~~~~~~~~~~~~aDvV 65 (258)
T PRK06476 1 MKIGFIG-TGAITEAMVTGLLTSPAD----VSEIIVSPRNA--QIAA----RLAER---F-PKVRIAKDNQAVVDRSDVV 65 (258)
T ss_pred CeEEEEC-cCHHHHHHHHHHHhCCCC----hheEEEECCCH--HHHH----HHHHH---c-CCceEeCCHHHHHHhCCEE
Confidence 3799999 799999999999887641 12566777642 2222 12111 0 1133345666777899999
Q ss_pred EEec
Q 019990 86 VMVG 89 (332)
Q Consensus 86 i~~a 89 (332)
|++.
T Consensus 66 ilav 69 (258)
T PRK06476 66 FLAV 69 (258)
T ss_pred EEEe
Confidence 9874
No 433
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=95.51 E-value=0.092 Score=48.30 Aligned_cols=75 Identities=8% Similarity=0.026 Sum_probs=52.6
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
+..+++|+| +|..|.+.+..+..-.-+ .+|+++|++. ++......++.+. ...++....+..+++++||
T Consensus 116 da~~l~iiG-aG~QA~~~~~a~~~v~~i-----~~v~v~~r~~--~~a~~f~~~~~~~---~~~~v~~~~~~~eav~~aD 184 (301)
T PRK06407 116 NVENFTIIG-SGFQAETQLEGMASVYNP-----KRIRVYSRNF--DHARAFAERFSKE---FGVDIRPVDNAEAALRDAD 184 (301)
T ss_pred CCcEEEEEC-CcHHHHHHHHHHHhcCCC-----CEEEEECCCH--HHHHHHHHHHHHh---cCCcEEEeCCHHHHHhcCC
Confidence 467899999 799999888877764322 3899999864 3455554444431 1224666678899999999
Q ss_pred EEEEec
Q 019990 84 IAVMVG 89 (332)
Q Consensus 84 iVi~~a 89 (332)
+|+.+-
T Consensus 185 IV~taT 190 (301)
T PRK06407 185 TITSIT 190 (301)
T ss_pred EEEEec
Confidence 998653
No 434
>PRK08618 ornithine cyclodeaminase; Validated
Probab=95.48 E-value=0.092 Score=48.84 Aligned_cols=74 Identities=12% Similarity=0.118 Sum_probs=49.0
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHh-cccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCC
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIAR-GIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDV 82 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~-~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (332)
...+++|+| +|.+|...+..++. .+. .+|.++|++. ++......++.+. +...+....+..++++++
T Consensus 126 ~~~~v~iiG-aG~~a~~~~~al~~~~~~------~~v~v~~r~~--~~a~~~~~~~~~~---~~~~~~~~~~~~~~~~~a 193 (325)
T PRK08618 126 DAKTLCLIG-TGGQAKGQLEAVLAVRDI------ERVRVYSRTF--EKAYAFAQEIQSK---FNTEIYVVNSADEAIEEA 193 (325)
T ss_pred CCcEEEEEC-CcHHHHHHHHHHHhcCCc------cEEEEECCCH--HHHHHHHHHHHHh---cCCcEEEeCCHHHHHhcC
Confidence 457899999 79999888776654 332 3899999864 3444333333321 112344456778889999
Q ss_pred cEEEEec
Q 019990 83 NIAVMVG 89 (332)
Q Consensus 83 DiVi~~a 89 (332)
|+|+.+-
T Consensus 194 DiVi~aT 200 (325)
T PRK08618 194 DIIVTVT 200 (325)
T ss_pred CEEEEcc
Confidence 9999764
No 435
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.48 E-value=0.056 Score=50.56 Aligned_cols=34 Identities=32% Similarity=0.536 Sum_probs=29.8
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecc
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIE 45 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~ 45 (332)
..||+|+| +|.+|++++..|...|+ + ++.++|.+
T Consensus 24 ~~~VlVvG-~GglGs~va~~La~aGv-g-----~i~lvD~D 57 (339)
T PRK07688 24 EKHVLIIG-AGALGTANAEMLVRAGV-G-----KVTIVDRD 57 (339)
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHcCC-C-----eEEEEeCC
Confidence 56899999 69999999999998885 2 89999975
No 436
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=95.45 E-value=0.054 Score=49.18 Aligned_cols=65 Identities=14% Similarity=0.266 Sum_probs=47.4
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcEE
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIA 85 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDiV 85 (332)
+||++|| .|..|+.++.+|+..|+ +++++|++.. +. ...+... ......+..++.+++|+|
T Consensus 1 ~kIafIG-LG~MG~pmA~~L~~aG~-------~v~v~~r~~~--ka---~~~~~~~------Ga~~a~s~~eaa~~aDvV 61 (286)
T COG2084 1 MKIAFIG-LGIMGSPMAANLLKAGH-------EVTVYNRTPE--KA---AELLAAA------GATVAASPAEAAAEADVV 61 (286)
T ss_pred CeEEEEc-CchhhHHHHHHHHHCCC-------EEEEEeCChh--hh---hHHHHHc------CCcccCCHHHHHHhCCEE
Confidence 4899999 89999999999999997 8999998642 21 1112111 122334567889999999
Q ss_pred EEec
Q 019990 86 VMVG 89 (332)
Q Consensus 86 i~~a 89 (332)
|.+-
T Consensus 62 itmv 65 (286)
T COG2084 62 ITML 65 (286)
T ss_pred EEec
Confidence 9975
No 437
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=95.45 E-value=0.05 Score=50.29 Aligned_cols=73 Identities=21% Similarity=0.291 Sum_probs=48.2
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
..++|+|+| +|.+|..++..|...+. .+|.++|++. ++.......+. ..+....++.+++.++|
T Consensus 177 ~~~~V~ViG-aG~iG~~~a~~L~~~g~------~~V~v~~r~~--~ra~~la~~~g-------~~~~~~~~~~~~l~~aD 240 (311)
T cd05213 177 KGKKVLVIG-AGEMGELAAKHLAAKGV------AEITIANRTY--ERAEELAKELG-------GNAVPLDELLELLNEAD 240 (311)
T ss_pred cCCEEEEEC-cHHHHHHHHHHHHHcCC------CEEEEEeCCH--HHHHHHHHHcC-------CeEEeHHHHHHHHhcCC
Confidence 468999999 69999999999987553 2789999853 22222222111 12222235667788999
Q ss_pred EEEEecCCC
Q 019990 84 IAVMVGGFP 92 (332)
Q Consensus 84 iVi~~ag~~ 92 (332)
+||.+.+.+
T Consensus 241 vVi~at~~~ 249 (311)
T cd05213 241 VVISATGAP 249 (311)
T ss_pred EEEECCCCC
Confidence 999986644
No 438
>PRK08291 ectoine utilization protein EutC; Validated
Probab=95.45 E-value=0.1 Score=48.62 Aligned_cols=75 Identities=19% Similarity=0.164 Sum_probs=50.1
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHh-cccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCC
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIAR-GIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDV 82 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~-~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (332)
+.++|+|+| +|..|...+..+.. .+. .++.+++++. ++++....++.+. +...+....++.++++++
T Consensus 131 ~~~~v~IiG-aG~~a~~~~~al~~~~~~------~~V~v~~R~~--~~a~~l~~~~~~~---~g~~v~~~~d~~~al~~a 198 (330)
T PRK08291 131 DASRAAVIG-AGEQARLQLEALTLVRPI------REVRVWARDA--AKAEAYAADLRAE---LGIPVTVARDVHEAVAGA 198 (330)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhcCCC------CEEEEEcCCH--HHHHHHHHHHhhc---cCceEEEeCCHHHHHccC
Confidence 357899999 69999988887764 333 2899999863 3444444433321 112344456788889999
Q ss_pred cEEEEecC
Q 019990 83 NIAVMVGG 90 (332)
Q Consensus 83 DiVi~~ag 90 (332)
|+|+.+..
T Consensus 199 DiVi~aT~ 206 (330)
T PRK08291 199 DIIVTTTP 206 (330)
T ss_pred CEEEEeeC
Confidence 99987643
No 439
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=95.42 E-value=0.052 Score=50.92 Aligned_cols=25 Identities=24% Similarity=0.372 Sum_probs=21.9
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcc
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGI 29 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~ 29 (332)
|+||+|+||+|.+|..++..|....
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p 26 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHP 26 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCC
Confidence 4799999999999999999888653
No 440
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.41 E-value=0.063 Score=45.21 Aligned_cols=33 Identities=30% Similarity=0.587 Sum_probs=28.3
Q ss_pred EEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEeccc
Q 019990 7 RVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEP 46 (332)
Q Consensus 7 kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~ 46 (332)
||+|+| +|.+|+.++..|...|+ + +++++|.+.
T Consensus 1 ~VlViG-~GglGs~ia~~La~~Gv-g-----~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAG-AGGLGSNIAVLLARSGV-G-----NLKLVDFDV 33 (174)
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCC-C-----eEEEEeCCE
Confidence 689999 79999999999998886 2 799999753
No 441
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=95.40 E-value=0.031 Score=53.43 Aligned_cols=72 Identities=22% Similarity=0.274 Sum_probs=47.9
Q ss_pred CCcEEEEEcC----------------CChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCcc
Q 019990 4 NPLRVLVTGA----------------AGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLK 67 (332)
Q Consensus 4 ~~~kI~VtGa----------------aG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~ 67 (332)
+.++|+|||| +|.+|.+++..|...|. +|.+++.+.. +. .... ....
T Consensus 187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga-------~V~~v~~~~~---~~-----~~~~--~~~~ 249 (399)
T PRK05579 187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGA-------DVTLVSGPVN---LP-----TPAG--VKRI 249 (399)
T ss_pred CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCC-------EEEEeCCCcc---cc-----CCCC--cEEE
Confidence 3578999999 89999999999999885 8999986431 10 1100 0012
Q ss_pred ceEEeCCHHHH----hCCCcEEEEecCCC
Q 019990 68 GVVATTDVVEA----CKDVNIAVMVGGFP 92 (332)
Q Consensus 68 ~v~~~~~~~~a----~~~aDiVi~~ag~~ 92 (332)
+++...++.++ +.+.|++|+.||+.
T Consensus 250 dv~~~~~~~~~v~~~~~~~DilI~~Aav~ 278 (399)
T PRK05579 250 DVESAQEMLDAVLAALPQADIFIMAAAVA 278 (399)
T ss_pred ccCCHHHHHHHHHHhcCCCCEEEEccccc
Confidence 33333344433 45689999999975
No 442
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=95.40 E-value=0.06 Score=46.44 Aligned_cols=35 Identities=23% Similarity=0.356 Sum_probs=30.0
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIE 45 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~ 45 (332)
...||+|+| +|.+|+.++..|...|+ .+++++|.+
T Consensus 20 ~~~~V~IvG-~GglGs~ia~~La~~Gv------g~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICG-LGGLGSNVAINLARAGI------GKLILVDFD 54 (200)
T ss_pred hCCcEEEEC-cCHHHHHHHHHHHHcCC------CEEEEECCC
Confidence 357899999 69999999999999886 279999976
No 443
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.40 E-value=0.063 Score=49.05 Aligned_cols=56 Identities=18% Similarity=0.364 Sum_probs=45.4
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
..++|+|+|.+|.+|..++..|++.+. ++.+++... .++.+.++.||
T Consensus 158 ~Gk~V~vIG~s~ivG~PmA~~L~~~ga-------tVtv~~~~t--------------------------~~l~e~~~~AD 204 (301)
T PRK14194 158 TGKHAVVIGRSNIVGKPMAALLLQAHC-------SVTVVHSRS--------------------------TDAKALCRQAD 204 (301)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCC-------EEEEECCCC--------------------------CCHHHHHhcCC
Confidence 467999999777999999999998875 888887532 14567788999
Q ss_pred EEEEecCCC
Q 019990 84 IAVMVGGFP 92 (332)
Q Consensus 84 iVi~~ag~~ 92 (332)
+||...|.+
T Consensus 205 IVIsavg~~ 213 (301)
T PRK14194 205 IVVAAVGRP 213 (301)
T ss_pred EEEEecCCh
Confidence 999988765
No 444
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.36 E-value=0.064 Score=48.81 Aligned_cols=56 Identities=18% Similarity=0.250 Sum_probs=42.3
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
..++|+|+|++|.+|..++..|+..+. +|.+++... .++.+.++++|
T Consensus 158 ~Gk~vvViG~gg~vGkpia~~L~~~ga-------tVtv~~~~t--------------------------~~L~~~~~~aD 204 (283)
T PRK14192 158 AGKHAVVVGRSAILGKPMAMMLLNANA-------TVTICHSRT--------------------------QNLPELVKQAD 204 (283)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHhCCC-------EEEEEeCCc--------------------------hhHHHHhccCC
Confidence 467999999766799999999988764 788887521 13445568999
Q ss_pred EEEEecCCC
Q 019990 84 IAVMVGGFP 92 (332)
Q Consensus 84 iVi~~ag~~ 92 (332)
+||.+.|.+
T Consensus 205 IvI~AtG~~ 213 (283)
T PRK14192 205 IIVGAVGKP 213 (283)
T ss_pred EEEEccCCC
Confidence 999988643
No 445
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=95.34 E-value=0.063 Score=44.92 Aligned_cols=55 Identities=18% Similarity=0.337 Sum_probs=41.6
Q ss_pred CCcEEEEEcCCCh-hHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCC
Q 019990 4 NPLRVLVTGAAGQ-IGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDV 82 (332)
Q Consensus 4 ~~~kI~VtGaaG~-IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (332)
..++|+|+|+ |. +|..++..|...+. ++.++++.. .++.+.++++
T Consensus 43 ~gk~vlViG~-G~~~G~~~a~~L~~~g~-------~V~v~~r~~--------------------------~~l~~~l~~a 88 (168)
T cd01080 43 AGKKVVVVGR-SNIVGKPLAALLLNRNA-------TVTVCHSKT--------------------------KNLKEHTKQA 88 (168)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHhhCCC-------EEEEEECCc--------------------------hhHHHHHhhC
Confidence 4689999995 75 69989999988774 677887531 2456678899
Q ss_pred cEEEEecCCC
Q 019990 83 NIAVMVGGFP 92 (332)
Q Consensus 83 DiVi~~ag~~ 92 (332)
|+||.+.+.+
T Consensus 89 DiVIsat~~~ 98 (168)
T cd01080 89 DIVIVAVGKP 98 (168)
T ss_pred CEEEEcCCCC
Confidence 9999887655
No 446
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=95.33 E-value=0.1 Score=48.29 Aligned_cols=73 Identities=23% Similarity=0.189 Sum_probs=47.8
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
+..+++|+| +|..+.+.+..+..-.-+ .+|++++++. ++.+....++.+ ....+....+.++++++||
T Consensus 127 ~~~~l~viG-aG~QA~~~~~a~~~~~~i-----~~v~v~~r~~--~~~~~~~~~~~~----~~~~v~~~~~~~~av~~aD 194 (313)
T PF02423_consen 127 DARTLGVIG-AGVQARWHLRALAAVRPI-----KEVRVYSRSP--ERAEAFAARLRD----LGVPVVAVDSAEEAVRGAD 194 (313)
T ss_dssp T--EEEEE---SHHHHHHHHHHHHHS-------SEEEEE-SSH--HHHHHHHHHHHC----CCTCEEEESSHHHHHTTSS
T ss_pred CCceEEEEC-CCHHHHHHHHHHHHhCCc-----eEEEEEccCh--hHHHHHHHhhcc----ccccceeccchhhhcccCC
Confidence 457899999 799999988877653212 3899999864 345555555544 1345666788999999999
Q ss_pred EEEEe
Q 019990 84 IAVMV 88 (332)
Q Consensus 84 iVi~~ 88 (332)
+|+.+
T Consensus 195 ii~ta 199 (313)
T PF02423_consen 195 IIVTA 199 (313)
T ss_dssp EEEE-
T ss_pred EEEEc
Confidence 98864
No 447
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=95.33 E-value=0.11 Score=42.15 Aligned_cols=56 Identities=21% Similarity=0.313 Sum_probs=44.6
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
..++|+|+|.+..+|..++..|.+.+. ++.+++.+. .++.+++++||
T Consensus 27 ~gk~v~VvGrs~~vG~pla~lL~~~ga-------tV~~~~~~t--------------------------~~l~~~v~~AD 73 (140)
T cd05212 27 DGKKVLVVGRSGIVGAPLQCLLQRDGA-------TVYSCDWKT--------------------------IQLQSKVHDAD 73 (140)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEeCCCC--------------------------cCHHHHHhhCC
Confidence 467999999999999999999987764 777777531 24567789999
Q ss_pred EEEEecCCC
Q 019990 84 IAVMVGGFP 92 (332)
Q Consensus 84 iVi~~ag~~ 92 (332)
+||...|.+
T Consensus 74 IVvsAtg~~ 82 (140)
T cd05212 74 VVVVGSPKP 82 (140)
T ss_pred EEEEecCCC
Confidence 999988765
No 448
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=95.32 E-value=0.11 Score=48.32 Aligned_cols=74 Identities=18% Similarity=0.142 Sum_probs=50.7
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHh-cccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCC
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIAR-GIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDV 82 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~-~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (332)
+..+++|+| +|..|...+..|.. .++ .+|.+++++. ++.+....++.+. +..++....++.++++++
T Consensus 128 ~~~~v~iiG-aG~qA~~~~~al~~~~~i------~~v~V~~R~~--~~a~~~a~~~~~~---~g~~v~~~~~~~~av~~a 195 (326)
T TIGR02992 128 DSSVVAIFG-AGMQARLQLEALTLVRDI------RSARIWARDS--AKAEALALQLSSL---LGIDVTAATDPRAAMSGA 195 (326)
T ss_pred CCcEEEEEC-CCHHHHHHHHHHHHhCCc------cEEEEECCCH--HHHHHHHHHHHhh---cCceEEEeCCHHHHhccC
Confidence 356899999 79999999988864 443 2799999864 3444444444321 112344456788889999
Q ss_pred cEEEEec
Q 019990 83 NIAVMVG 89 (332)
Q Consensus 83 DiVi~~a 89 (332)
|+|+.+-
T Consensus 196 DiVvtaT 202 (326)
T TIGR02992 196 DIIVTTT 202 (326)
T ss_pred CEEEEec
Confidence 9999874
No 449
>PLN02256 arogenate dehydrogenase
Probab=95.31 E-value=0.086 Score=48.55 Aligned_cols=65 Identities=17% Similarity=0.266 Sum_probs=43.4
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHh-CCC
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEAC-KDV 82 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~-~~a 82 (332)
.++||+|+| .|.+|+.++..|.+.+. +|..+|.+.. .....++ .+....+..+.+ .++
T Consensus 35 ~~~kI~IIG-~G~mG~slA~~L~~~G~-------~V~~~d~~~~----~~~a~~~---------gv~~~~~~~e~~~~~a 93 (304)
T PLN02256 35 RKLKIGIVG-FGNFGQFLAKTFVKQGH-------TVLATSRSDY----SDIAAEL---------GVSFFRDPDDFCEEHP 93 (304)
T ss_pred CCCEEEEEe-eCHHHHHHHHHHHhCCC-------EEEEEECccH----HHHHHHc---------CCeeeCCHHHHhhCCC
Confidence 457999999 79999999999987664 7888997531 1111111 112234555555 479
Q ss_pred cEEEEec
Q 019990 83 NIAVMVG 89 (332)
Q Consensus 83 DiVi~~a 89 (332)
|+||++.
T Consensus 94 DvVilav 100 (304)
T PLN02256 94 DVVLLCT 100 (304)
T ss_pred CEEEEec
Confidence 9999974
No 450
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=95.29 E-value=0.068 Score=50.16 Aligned_cols=34 Identities=21% Similarity=0.377 Sum_probs=26.5
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEE-EEecc
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILH-MLDIE 45 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~-l~D~~ 45 (332)
+||+|+||+|.+|..++..|.+... .+++ +++.+
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~------~el~~l~~s~ 35 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPE------VEITYLVSSR 35 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCC------ceEEEEeccc
Confidence 4899999999999999999886533 2666 55653
No 451
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=95.27 E-value=0.061 Score=49.95 Aligned_cols=66 Identities=17% Similarity=0.050 Sum_probs=44.7
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
+.++|+|+| .|.+|.+++..|...++ +++..+.... ....... .. .+.. .+..+++++||
T Consensus 16 ~gktIgIIG-~GsmG~AlA~~L~~sG~-------~Vvv~~r~~~--~s~~~A~---~~------G~~~-~s~~eaa~~AD 75 (330)
T PRK05479 16 KGKKVAIIG-YGSQGHAHALNLRDSGV-------DVVVGLREGS--KSWKKAE---AD------GFEV-LTVAEAAKWAD 75 (330)
T ss_pred CCCEEEEEe-eHHHHHHHHHHHHHCCC-------EEEEEECCch--hhHHHHH---HC------CCee-CCHHHHHhcCC
Confidence 457899999 79999999999998775 6777765421 1111111 10 1222 36678899999
Q ss_pred EEEEec
Q 019990 84 IAVMVG 89 (332)
Q Consensus 84 iVi~~a 89 (332)
+|+++.
T Consensus 76 VVvLaV 81 (330)
T PRK05479 76 VIMILL 81 (330)
T ss_pred EEEEcC
Confidence 999874
No 452
>PRK07340 ornithine cyclodeaminase; Validated
Probab=95.26 E-value=0.091 Score=48.40 Aligned_cols=73 Identities=12% Similarity=-0.002 Sum_probs=49.8
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHh-cccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCC
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIAR-GIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDV 82 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~-~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (332)
+.++++|+| +|..|...+..+.. .+. .++.++|++. ++.......+... ...+. ..+..+++.++
T Consensus 124 ~~~~v~IiG-aG~qa~~~~~al~~~~~~------~~v~v~~r~~--~~a~~~a~~~~~~----~~~~~-~~~~~~av~~a 189 (304)
T PRK07340 124 PPGDLLLIG-TGVQARAHLEAFAAGLPV------RRVWVRGRTA--ASAAAFCAHARAL----GPTAE-PLDGEAIPEAV 189 (304)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHhCCC------CEEEEEcCCH--HHHHHHHHHHHhc----CCeeE-ECCHHHHhhcC
Confidence 457899999 79999999998875 333 2899999864 3444444444321 11222 35677889999
Q ss_pred cEEEEecC
Q 019990 83 NIAVMVGG 90 (332)
Q Consensus 83 DiVi~~ag 90 (332)
|+||.+-.
T Consensus 190 DiVitaT~ 197 (304)
T PRK07340 190 DLVVTATT 197 (304)
T ss_pred CEEEEccC
Confidence 99998643
No 453
>PRK06545 prephenate dehydrogenase; Validated
Probab=95.23 E-value=0.063 Score=50.66 Aligned_cols=68 Identities=24% Similarity=0.358 Sum_probs=43.8
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcEE
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIA 85 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDiV 85 (332)
+||+|+| .|.+|.+++..|...++ ++.++|.+....... ... . ..... ...+++.+++++||+|
T Consensus 1 ~~I~iIG-~GliG~siA~~L~~~G~-------~v~i~~~~~~~~~~~---~a~-~--~~~~~--~~~~~~~~~~~~aDlV 64 (359)
T PRK06545 1 RTVLIVG-LGLIGGSLALAIKAAGP-------DVFIIGYDPSAAQLA---RAL-G--FGVID--ELAADLQRAAAEADLI 64 (359)
T ss_pred CeEEEEE-eCHHHHHHHHHHHhcCC-------CeEEEEeCCCHHHHH---HHh-c--CCCCc--ccccCHHHHhcCCCEE
Confidence 4799999 79999999999998875 677777654221110 000 0 00011 1234567778999999
Q ss_pred EEec
Q 019990 86 VMVG 89 (332)
Q Consensus 86 i~~a 89 (332)
|++.
T Consensus 65 ilav 68 (359)
T PRK06545 65 VLAV 68 (359)
T ss_pred EEeC
Confidence 9874
No 454
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=95.22 E-value=0.067 Score=49.90 Aligned_cols=75 Identities=21% Similarity=0.243 Sum_probs=43.6
Q ss_pred CCCCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCC
Q 019990 2 AKNPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKD 81 (332)
Q Consensus 2 ~~~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~ 81 (332)
..+.+||+|+||+|++|..++..|.+..+ +..++.++.... ..|....+. ..++........++.+
T Consensus 1 ~~~~~~vaIvGATG~vG~ellrlL~~~~h----P~~~l~~laS~~----saG~~~~~~------~~~~~v~~~~~~~~~~ 66 (336)
T PRK08040 1 MSEGWNIALLGATGAVGEALLELLAERQF----PVGELYALASEE----SAGETLRFG------GKSVTVQDAAEFDWSQ 66 (336)
T ss_pred CCCCCEEEEEccCCHHHHHHHHHHhcCCC----CceEEEEEEccC----cCCceEEEC------CcceEEEeCchhhccC
Confidence 03567999999999999999998887432 113777775421 122222111 1133332111223478
Q ss_pred CcEEEEecC
Q 019990 82 VNIAVMVGG 90 (332)
Q Consensus 82 aDiVi~~ag 90 (332)
+|+||++++
T Consensus 67 ~Dvvf~a~p 75 (336)
T PRK08040 67 AQLAFFVAG 75 (336)
T ss_pred CCEEEECCC
Confidence 899988753
No 455
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.21 E-value=0.31 Score=44.74 Aligned_cols=34 Identities=9% Similarity=0.131 Sum_probs=27.8
Q ss_pred CCcEEEEEcCC--ChhHHHHHHHHHhcccCCCCCCeEEEEEec
Q 019990 4 NPLRVLVTGAA--GQIGYALVPMIARGIMLGPDQPVILHMLDI 44 (332)
Q Consensus 4 ~~~kI~VtGaa--G~IGs~l~~~L~~~~~~~~~~~~~i~l~D~ 44 (332)
+.+.++||||+ ..||.+++..|++.|. +|++.|.
T Consensus 7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga-------~Vvv~~~ 42 (299)
T PRK06300 7 TGKIAFIAGIGDDQGYGWGIAKALAEAGA-------TILVGTW 42 (299)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCC-------EEEEEec
Confidence 35678999974 6999999999999885 7777653
No 456
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=95.19 E-value=0.068 Score=46.16 Aligned_cols=35 Identities=26% Similarity=0.380 Sum_probs=30.0
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIE 45 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~ 45 (332)
...||+|+| +|.+|+.++..|...|. + ++.++|.+
T Consensus 20 ~~~~VlviG-~GglGs~ia~~La~~Gv-~-----~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIG-AGGLGSPAALYLAGAGV-G-----TIVIVDDD 54 (202)
T ss_pred cCCCEEEEC-CCHHHHHHHHHHHHcCC-C-----eEEEecCC
Confidence 357899999 79999999999999885 2 79999975
No 457
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.18 E-value=0.072 Score=48.37 Aligned_cols=56 Identities=18% Similarity=0.279 Sum_probs=43.8
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
..++|+|+|+++.+|..++..|...+- ++..++.++ .++.+.+++||
T Consensus 157 ~Gk~vvVIGrs~~VG~pla~lL~~~ga-------tVtv~~s~t--------------------------~~l~~~~~~AD 203 (286)
T PRK14175 157 EGKNAVVIGRSHIVGQPVSKLLLQKNA-------SVTILHSRS--------------------------KDMASYLKDAD 203 (286)
T ss_pred CCCEEEEECCCchhHHHHHHHHHHCCC-------eEEEEeCCc--------------------------hhHHHHHhhCC
Confidence 468999999766799999999988764 777776521 24566789999
Q ss_pred EEEEecCCC
Q 019990 84 IAVMVGGFP 92 (332)
Q Consensus 84 iVi~~ag~~ 92 (332)
+||.+.|.+
T Consensus 204 IVIsAvg~p 212 (286)
T PRK14175 204 VIVSAVGKP 212 (286)
T ss_pred EEEECCCCC
Confidence 999988765
No 458
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=95.18 E-value=0.17 Score=49.69 Aligned_cols=72 Identities=13% Similarity=0.071 Sum_probs=47.0
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccC-CccceEEeCCHHHHhC--
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFP-LLKGVVATTDVVEACK-- 80 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~-~~~~v~~~~~~~~a~~-- 80 (332)
++++|.++| .|.+|++++..|+..|+ +|.++|+.. ++.. ++.+.... ....+....++.++.+
T Consensus 5 ~~~~IG~IG-LG~MG~~mA~nL~~~G~-------~V~V~NRt~--~k~~----~l~~~~~~~Ga~~~~~a~s~~e~v~~l 70 (493)
T PLN02350 5 ALSRIGLAG-LAVMGQNLALNIAEKGF-------PISVYNRTT--SKVD----ETVERAKKEGNLPLYGFKDPEDFVLSI 70 (493)
T ss_pred CCCCEEEEe-eHHHHHHHHHHHHhCCC-------eEEEECCCH--HHHH----HHHHhhhhcCCcccccCCCHHHHHhcC
Confidence 567899999 89999999999999886 899999853 2222 22211000 0011223345555554
Q ss_pred -CCcEEEEec
Q 019990 81 -DVNIAVMVG 89 (332)
Q Consensus 81 -~aDiVi~~a 89 (332)
.+|+||.+-
T Consensus 71 ~~~dvIi~~v 80 (493)
T PLN02350 71 QKPRSVIILV 80 (493)
T ss_pred CCCCEEEEEC
Confidence 499999874
No 459
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.17 E-value=0.086 Score=49.29 Aligned_cols=35 Identities=31% Similarity=0.448 Sum_probs=30.0
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEeccc
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEP 46 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~ 46 (332)
..||+|+| +|.+|++++..|...|+ + ++.++|.+.
T Consensus 24 ~~~VlIiG-~GglGs~va~~La~aGv-g-----~i~lvD~D~ 58 (338)
T PRK12475 24 EKHVLIVG-AGALGAANAEALVRAGI-G-----KLTIADRDY 58 (338)
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHcCC-C-----EEEEEcCCc
Confidence 56899999 69999999999999885 2 799999753
No 460
>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]
Probab=95.11 E-value=0.082 Score=47.50 Aligned_cols=70 Identities=20% Similarity=0.287 Sum_probs=47.0
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcE
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNI 84 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDi 84 (332)
++||+++| +|.+|++++..|+..+... +.+|.+.+++. ++.. ++.+. +.. .. ..+..++..++|+
T Consensus 1 ~~~IgfIG-~G~Mg~Ai~~gl~~~g~~~---~~~I~v~~~~~--e~~~----~l~~~-~g~--~~--~~~~~~~~~~adv 65 (266)
T COG0345 1 MMKIGFIG-AGNMGEAILSGLLKSGALP---PEEIIVTNRSE--EKRA----ALAAE-YGV--VT--TTDNQEAVEEADV 65 (266)
T ss_pred CceEEEEc-cCHHHHHHHHHHHhcCCCC---cceEEEeCCCH--HHHH----HHHHH-cCC--cc--cCcHHHHHhhCCE
Confidence 47899999 7999999999999887322 23788888753 2222 12211 111 11 4566677889999
Q ss_pred EEEec
Q 019990 85 AVMVG 89 (332)
Q Consensus 85 Vi~~a 89 (332)
||.+.
T Consensus 66 v~Lav 70 (266)
T COG0345 66 VFLAV 70 (266)
T ss_pred EEEEe
Confidence 99874
No 461
>PTZ00431 pyrroline carboxylate reductase; Provisional
Probab=95.08 E-value=0.1 Score=46.82 Aligned_cols=63 Identities=22% Similarity=0.228 Sum_probs=43.0
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
+.|||+|+| +|.+|++++..|.+.+... +.++..+|++. +.. .+....+..+.++++|
T Consensus 2 ~~mkI~iIG-~G~mG~ai~~~l~~~~~~~---~~~i~~~~~~~--~~~----------------~~~~~~~~~~~~~~~D 59 (260)
T PTZ00431 2 ENIRVGFIG-LGKMGSALAYGIENSNIIG---KENIYYHTPSK--KNT----------------PFVYLQSNEELAKTCD 59 (260)
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHhCCCCC---cceEEEECCCh--hcC----------------CeEEeCChHHHHHhCC
Confidence 346899999 7999999999999876432 12588888642 111 0112345556678999
Q ss_pred EEEEe
Q 019990 84 IAVMV 88 (332)
Q Consensus 84 iVi~~ 88 (332)
+||++
T Consensus 60 ~Vila 64 (260)
T PTZ00431 60 IIVLA 64 (260)
T ss_pred EEEEE
Confidence 99887
No 462
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.03 E-value=0.23 Score=38.35 Aligned_cols=95 Identities=19% Similarity=0.362 Sum_probs=53.8
Q ss_pred EEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccC-CccceEEeCCHHHH-hCCCcEE
Q 019990 8 VLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFP-LLKGVVATTDVVEA-CKDVNIA 85 (332)
Q Consensus 8 I~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~-~~~~v~~~~~~~~a-~~~aDiV 85 (332)
|.|+| .|.+|..++..|.+.+. +++++|.++ +... .+...... ..++......+.++ +.++|.|
T Consensus 1 vvI~G-~g~~~~~i~~~L~~~~~-------~vvvid~d~--~~~~----~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~v 66 (116)
T PF02254_consen 1 VVIIG-YGRIGREIAEQLKEGGI-------DVVVIDRDP--ERVE----ELREEGVEVIYGDATDPEVLERAGIEKADAV 66 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTS-------EEEEEESSH--HHHH----HHHHTTSEEEES-TTSHHHHHHTTGGCESEE
T ss_pred eEEEc-CCHHHHHHHHHHHhCCC-------EEEEEECCc--HHHH----HHHhcccccccccchhhhHHhhcCccccCEE
Confidence 67899 69999999999998653 799999864 2222 22211111 11233222233332 5788988
Q ss_pred EEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeC
Q 019990 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVAN 132 (332)
Q Consensus 86 i~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~sn 132 (332)
+.+.+ + + ..|. .++..+++.. |+.+++...+
T Consensus 67 v~~~~-------~--d--~~n~----~~~~~~r~~~-~~~~ii~~~~ 97 (116)
T PF02254_consen 67 VILTD-------D--D--EENL----LIALLARELN-PDIRIIARVN 97 (116)
T ss_dssp EEESS-------S--H--HHHH----HHHHHHHHHT-TTSEEEEEES
T ss_pred EEccC-------C--H--HHHH----HHHHHHHHHC-CCCeEEEEEC
Confidence 88742 1 1 2233 3455566654 6666666554
No 463
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=95.02 E-value=0.097 Score=47.21 Aligned_cols=68 Identities=22% Similarity=0.306 Sum_probs=43.5
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeE-EEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVI-LHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~-i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
|+||+|+| +|.+|..++..|.+.+. + .+ +.++|.+. ++.. ++.+. . +.....++.+.+.++|
T Consensus 1 mmrIgIIG-~G~iG~~ia~~l~~~~~-~----~elv~v~d~~~--~~a~----~~a~~---~--~~~~~~~~~ell~~~D 63 (265)
T PRK13304 1 MLKIGIVG-CGAIASLITKAILSGRI-N----AELYAFYDRNL--EKAE----NLASK---T--GAKACLSIDELVEDVD 63 (265)
T ss_pred CCEEEEEC-ccHHHHHHHHHHHcCCC-C----eEEEEEECCCH--HHHH----HHHHh---c--CCeeECCHHHHhcCCC
Confidence 46999999 79999999998876531 1 14 56788753 2222 12110 0 1223456666668999
Q ss_pred EEEEec
Q 019990 84 IAVMVG 89 (332)
Q Consensus 84 iVi~~a 89 (332)
+|++++
T Consensus 64 vVvi~a 69 (265)
T PRK13304 64 LVVECA 69 (265)
T ss_pred EEEEcC
Confidence 999986
No 464
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=95.01 E-value=0.15 Score=48.28 Aligned_cols=61 Identities=18% Similarity=0.195 Sum_probs=43.9
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
..++|+|+| .|.||+.++..|..-|. ++..+|.... + .+ .. . ...++.+.++.||
T Consensus 115 ~gktvGIIG-~G~IG~~vA~~l~a~G~-------~V~~~dp~~~-~--~~------~~-------~-~~~~L~ell~~sD 169 (378)
T PRK15438 115 HDRTVGIVG-VGNVGRRLQARLEALGI-------KTLLCDPPRA-D--RG------DE-------G-DFRSLDELVQEAD 169 (378)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHCCC-------EEEEECCccc-c--cc------cc-------c-ccCCHHHHHhhCC
Confidence 457999999 79999999999988775 8999985311 0 00 00 0 1246778889999
Q ss_pred EEEEec
Q 019990 84 IAVMVG 89 (332)
Q Consensus 84 iVi~~a 89 (332)
+|++..
T Consensus 170 iI~lh~ 175 (378)
T PRK15438 170 ILTFHT 175 (378)
T ss_pred EEEEeC
Confidence 998764
No 465
>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]
Probab=94.96 E-value=0.4 Score=41.67 Aligned_cols=87 Identities=20% Similarity=0.289 Sum_probs=53.8
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcEE
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIA 85 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDiV 85 (332)
++|.++| +|+||..++..+..+.. + ..-+.++|.+. ++.. .+... ... ....++.+.+.+.|++
T Consensus 1 l~vgiVG-cGaIG~~l~e~v~~~~~-~---~e~v~v~D~~~--ek~~----~~~~~---~~~--~~~s~ide~~~~~Dlv 64 (255)
T COG1712 1 LKVGIVG-CGAIGKFLLELVRDGRV-D---FELVAVYDRDE--EKAK----ELEAS---VGR--RCVSDIDELIAEVDLV 64 (255)
T ss_pred CeEEEEe-ccHHHHHHHHHHhcCCc-c---eeEEEEecCCH--HHHH----HHHhh---cCC--CccccHHHHhhcccee
Confidence 4799999 89999999988775532 1 12577888753 2222 22211 111 1125666667899999
Q ss_pred EEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCc
Q 019990 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNC 125 (332)
Q Consensus 86 i~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~ 125 (332)
|-+|+. +.+++++..+-+.+ .++
T Consensus 65 VEaAS~----------------~Av~e~~~~~L~~g-~d~ 87 (255)
T COG1712 65 VEAASP----------------EAVREYVPKILKAG-IDV 87 (255)
T ss_pred eeeCCH----------------HHHHHHhHHHHhcC-CCE
Confidence 988752 33566677676665 454
No 466
>PRK06141 ornithine cyclodeaminase; Validated
Probab=94.95 E-value=0.19 Score=46.53 Aligned_cols=73 Identities=19% Similarity=0.226 Sum_probs=49.0
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHh-cccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCC
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIAR-GIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDV 82 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~-~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (332)
+.++|+|+| +|..|...+..++. .+. .+|+++++.. ++......++.+. ...+....+..++++++
T Consensus 124 ~~~~v~iiG-~G~~a~~~~~al~~~~~~------~~V~V~~Rs~--~~a~~~a~~~~~~----g~~~~~~~~~~~av~~a 190 (314)
T PRK06141 124 DASRLLVVG-TGRLASLLALAHASVRPI------KQVRVWGRDP--AKAEALAAELRAQ----GFDAEVVTDLEAAVRQA 190 (314)
T ss_pred CCceEEEEC-CcHHHHHHHHHHHhcCCC------CEEEEEcCCH--HHHHHHHHHHHhc----CCceEEeCCHHHHHhcC
Confidence 467999999 79999999886654 332 2899999853 3444444443321 11244456778889999
Q ss_pred cEEEEec
Q 019990 83 NIAVMVG 89 (332)
Q Consensus 83 DiVi~~a 89 (332)
|+|+.+.
T Consensus 191 DIVi~aT 197 (314)
T PRK06141 191 DIISCAT 197 (314)
T ss_pred CEEEEee
Confidence 9996553
No 467
>PRK07589 ornithine cyclodeaminase; Validated
Probab=94.95 E-value=0.17 Score=47.39 Aligned_cols=74 Identities=19% Similarity=0.204 Sum_probs=51.4
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
+..+++|+| +|..+.+.+..++.-.-+ .+|+++++.. ++......++.+. ..++....+.++++++||
T Consensus 128 da~~l~iiG-aG~QA~~~l~a~~~vr~i-----~~V~v~~r~~--~~a~~~~~~~~~~----~~~v~~~~~~~~av~~AD 195 (346)
T PRK07589 128 DSRTMALIG-NGAQSEFQALAFKALLGI-----EEIRLYDIDP--AATAKLARNLAGP----GLRIVACRSVAEAVEGAD 195 (346)
T ss_pred CCcEEEEEC-CcHHHHHHHHHHHHhCCc-----eEEEEEeCCH--HHHHHHHHHHHhc----CCcEEEeCCHHHHHhcCC
Confidence 457899999 799998888777653222 3899999864 3444444444431 124555678899999999
Q ss_pred EEEEec
Q 019990 84 IAVMVG 89 (332)
Q Consensus 84 iVi~~a 89 (332)
+|+.+-
T Consensus 196 IIvtaT 201 (346)
T PRK07589 196 IITTVT 201 (346)
T ss_pred EEEEec
Confidence 999754
No 468
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.86 E-value=0.066 Score=44.62 Aligned_cols=155 Identities=16% Similarity=0.182 Sum_probs=85.2
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhC---C
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACK---D 81 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~---~ 81 (332)
.+.|++|||.-.||..++..|...|- .+..+-+++ +.+...+.+-.-...|...++.....+.+.+. -
T Consensus 7 G~~vlvTgagaGIG~~~v~~La~aGA-------~ViAvaR~~--a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~p 77 (245)
T KOG1207|consen 7 GVIVLVTGAGAGIGKEIVLSLAKAGA-------QVIAVARNE--ANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFP 77 (245)
T ss_pred ceEEEeecccccccHHHHHHHHhcCC-------EEEEEecCH--HHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCc
Confidence 46799999766899999999998774 777777653 22332222111111233334433222333332 2
Q ss_pred CcEEEEecCCCCC-C-C----CChhHHHhhhHHHHHHHHHHHHh----hcCCCcEEEEEeCChhhHHHHHHHHCCCCCCC
Q 019990 82 VNIAVMVGGFPRK-E-G----MERKDVMSKNVSIYKAQASALEK----HAAPNCKVLVVANPANTNALILKEFAPSIPAK 151 (332)
Q Consensus 82 aDiVi~~ag~~~~-~-~----~~~~~~~~~N~~~~~~i~~~i~~----~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~ 151 (332)
.|..+.-||+... + + ++-+.-+..|+.....+.+..++ ...+.+ ++.+|+-+. + ..+..+
T Consensus 78 idgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~Ga-IVNvSSqas------~---R~~~nH 147 (245)
T KOG1207|consen 78 IDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGA-IVNVSSQAS------I---RPLDNH 147 (245)
T ss_pred hhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCce-EEEecchhc------c---cccCCc
Confidence 4666666765321 1 1 11112356677666555554332 232444 566665321 1 235667
Q ss_pred cEEEeecccHHHHHHHHHHHcCCCCCCee
Q 019990 152 NITCLTRLDHNRAMGQISERLKVHVSDVK 180 (332)
Q Consensus 152 ~i~~~t~l~~~r~~~~~a~~~~v~~~~v~ 180 (332)
..|..|+-.-..+.+.+|-.+| |..+|
T Consensus 148 tvYcatKaALDmlTk~lAlELG--p~kIR 174 (245)
T KOG1207|consen 148 TVYCATKAALDMLTKCLALELG--PQKIR 174 (245)
T ss_pred eEEeecHHHHHHHHHHHHHhhC--cceeE
Confidence 7888888777777777777766 45554
No 469
>PRK06823 ornithine cyclodeaminase; Validated
Probab=94.82 E-value=0.23 Score=46.02 Aligned_cols=74 Identities=15% Similarity=0.041 Sum_probs=51.1
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
+..+++|+| +|..+.+.+..+..-.-+ .+|+++|++. ++.......+.+. ..++....+..+++++||
T Consensus 127 d~~~l~iiG-~G~qA~~~~~a~~~v~~i-----~~v~v~~r~~--~~a~~~~~~~~~~----~~~v~~~~~~~~av~~AD 194 (315)
T PRK06823 127 HVSAIGIVG-TGIQARMQLMYLKNVTDC-----RQLWVWGRSE--TALEEYRQYAQAL----GFAVNTTLDAAEVAHAAN 194 (315)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHhcCCC-----CEEEEECCCH--HHHHHHHHHHHhc----CCcEEEECCHHHHhcCCC
Confidence 467899999 799999988887763322 3899999864 3444333333321 124555677889999999
Q ss_pred EEEEec
Q 019990 84 IAVMVG 89 (332)
Q Consensus 84 iVi~~a 89 (332)
+|+.+-
T Consensus 195 IV~taT 200 (315)
T PRK06823 195 LIVTTT 200 (315)
T ss_pred EEEEec
Confidence 999764
No 470
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=94.80 E-value=0.09 Score=50.68 Aligned_cols=73 Identities=21% Similarity=0.243 Sum_probs=48.1
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
...+|+|+| +|.+|..++..|...|. .+|.+++++. ++.......+. .......++.+++.++|
T Consensus 179 ~~~~VlViG-aG~iG~~~a~~L~~~G~------~~V~v~~rs~--~ra~~la~~~g-------~~~i~~~~l~~~l~~aD 242 (417)
T TIGR01035 179 KGKKALLIG-AGEMGELVAKHLLRKGV------GKILIANRTY--ERAEDLAKELG-------GEAVKFEDLEEYLAEAD 242 (417)
T ss_pred cCCEEEEEC-ChHHHHHHHHHHHHCCC------CEEEEEeCCH--HHHHHHHHHcC-------CeEeeHHHHHHHHhhCC
Confidence 357899999 69999999999988764 2789998853 22222221111 11112235667788999
Q ss_pred EEEEecCCC
Q 019990 84 IAVMVGGFP 92 (332)
Q Consensus 84 iVi~~ag~~ 92 (332)
+||.+.+.+
T Consensus 243 vVi~aT~s~ 251 (417)
T TIGR01035 243 IVISSTGAP 251 (417)
T ss_pred EEEECCCCC
Confidence 999886544
No 471
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=94.77 E-value=0.21 Score=47.42 Aligned_cols=62 Identities=13% Similarity=0.070 Sum_probs=44.3
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
..++|+|+| .|.||+.++..|..-|. ++..+|.... ... . .. ...++.+.+++||
T Consensus 115 ~gktvGIIG-~G~IG~~va~~l~a~G~-------~V~~~Dp~~~--~~~-------~-------~~-~~~~l~ell~~aD 169 (381)
T PRK00257 115 AERTYGVVG-AGHVGGRLVRVLRGLGW-------KVLVCDPPRQ--EAE-------G-------DG-DFVSLERILEECD 169 (381)
T ss_pred CcCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEECCccc--ccc-------c-------Cc-cccCHHHHHhhCC
Confidence 357899999 79999999999988775 8999996321 000 0 00 1235778889999
Q ss_pred EEEEecC
Q 019990 84 IAVMVGG 90 (332)
Q Consensus 84 iVi~~ag 90 (332)
+|++..-
T Consensus 170 iV~lh~P 176 (381)
T PRK00257 170 VISLHTP 176 (381)
T ss_pred EEEEeCc
Confidence 9887653
No 472
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=94.77 E-value=0.16 Score=43.78 Aligned_cols=35 Identities=29% Similarity=0.389 Sum_probs=30.1
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEeccc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEP 46 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~ 46 (332)
..++|+|+| .|.+|++++..|.+.|. +|+.+|.+.
T Consensus 27 ~gk~v~I~G-~G~vG~~~A~~L~~~G~-------~Vvv~D~~~ 61 (200)
T cd01075 27 EGKTVAVQG-LGKVGYKLAEHLLEEGA-------KLIVADINE 61 (200)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEEcCCH
Confidence 357899999 69999999999998885 888999853
No 473
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=94.74 E-value=0.15 Score=42.15 Aligned_cols=67 Identities=28% Similarity=0.401 Sum_probs=42.2
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
..++++|+| -|.+|+.+|..|...|. +|.++|.++- ..+++. + + .+.. ..+.++++.+|
T Consensus 22 ~Gk~vvV~G-YG~vG~g~A~~lr~~Ga-------~V~V~e~DPi-~alqA~-~---d-------Gf~v-~~~~~a~~~ad 80 (162)
T PF00670_consen 22 AGKRVVVIG-YGKVGKGIARALRGLGA-------RVTVTEIDPI-RALQAA-M---D-------GFEV-MTLEEALRDAD 80 (162)
T ss_dssp TTSEEEEE---SHHHHHHHHHHHHTT--------EEEEE-SSHH-HHHHHH-H---T-------T-EE-E-HHHHTTT-S
T ss_pred CCCEEEEeC-CCcccHHHHHHHhhCCC-------EEEEEECChH-HHHHhh-h---c-------CcEe-cCHHHHHhhCC
Confidence 457899999 79999999999998875 8899998642 122221 1 1 1222 24788999999
Q ss_pred EEEEecCC
Q 019990 84 IAVMVGGF 91 (332)
Q Consensus 84 iVi~~ag~ 91 (332)
++|.+-|.
T Consensus 81 i~vtaTG~ 88 (162)
T PF00670_consen 81 IFVTATGN 88 (162)
T ss_dssp EEEE-SSS
T ss_pred EEEECCCC
Confidence 98876554
No 474
>TIGR00465 ilvC ketol-acid reductoisomerase. This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway
Probab=94.73 E-value=0.11 Score=48.15 Aligned_cols=66 Identities=14% Similarity=0.077 Sum_probs=42.9
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
+.+||+|+| .|.+|++++..|...++ ++++.+.... +... .+... .+.. .+..++++++|
T Consensus 2 ~~kkIgiIG-~G~mG~AiA~~L~~sG~-------~Viv~~~~~~-~~~~----~a~~~------Gv~~-~s~~ea~~~AD 61 (314)
T TIGR00465 2 KGKTVAIIG-YGSQGHAQALNLRDSGL-------NVIVGLRKGG-ASWK----KATED------GFKV-GTVEEAIPQAD 61 (314)
T ss_pred CcCEEEEEe-EcHHHHHHHHHHHHCCC-------eEEEEECcCh-hhHH----HHHHC------CCEE-CCHHHHHhcCC
Confidence 357899999 79999999999998775 5655554321 1111 11111 1222 24667789999
Q ss_pred EEEEec
Q 019990 84 IAVMVG 89 (332)
Q Consensus 84 iVi~~a 89 (332)
+|+++.
T Consensus 62 iVvLaV 67 (314)
T TIGR00465 62 LIMNLL 67 (314)
T ss_pred EEEEeC
Confidence 999874
No 475
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=94.73 E-value=0.049 Score=57.83 Aligned_cols=83 Identities=12% Similarity=0.161 Sum_probs=46.6
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCC------CC-CCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHH
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLG------PD-QPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVV 76 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~------~~-~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~ 76 (332)
.++||+|+| +|+||+..+..|.+..-.. .+ +...+.+.|.+. +.++.....+.... ....|+....++.
T Consensus 568 ~~~rIlVLG-AG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~--~~a~~la~~~~~~~-~v~lDv~D~e~L~ 643 (1042)
T PLN02819 568 KSQNVLILG-AGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYL--KDAKETVEGIENAE-AVQLDVSDSESLL 643 (1042)
T ss_pred cCCcEEEEC-CCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCH--HHHHHHHHhcCCCc-eEEeecCCHHHHH
Confidence 478999999 6999999999997643210 00 012477788753 22222221111100 0112233334455
Q ss_pred HHhCCCcEEEEecC
Q 019990 77 EACKDVNIAVMVGG 90 (332)
Q Consensus 77 ~a~~~aDiVi~~ag 90 (332)
++++++|+||.+..
T Consensus 644 ~~v~~~DaVIsalP 657 (1042)
T PLN02819 644 KYVSQVDVVISLLP 657 (1042)
T ss_pred HhhcCCCEEEECCC
Confidence 55688999999864
No 476
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=94.73 E-value=0.19 Score=45.57 Aligned_cols=75 Identities=12% Similarity=0.094 Sum_probs=48.1
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
..++++|+| +|.+|++++..|...+. .+|.+++++. ++++....++... ..+....+..+.+.++|
T Consensus 122 ~~k~vlVlG-aGg~a~ai~~aL~~~g~------~~V~v~~R~~--~~a~~l~~~~~~~-----~~~~~~~~~~~~~~~~D 187 (278)
T PRK00258 122 KGKRILILG-AGGAARAVILPLLDLGV------AEITIVNRTV--ERAEELAKLFGAL-----GKAELDLELQEELADFD 187 (278)
T ss_pred CCCEEEEEc-CcHHHHHHHHHHHHcCC------CEEEEEeCCH--HHHHHHHHHhhhc-----cceeecccchhccccCC
Confidence 356899999 59999999999998774 2899999863 3333332222211 01111113345678899
Q ss_pred EEEEecCCC
Q 019990 84 IAVMVGGFP 92 (332)
Q Consensus 84 iVi~~ag~~ 92 (332)
+||.+....
T Consensus 188 ivInaTp~g 196 (278)
T PRK00258 188 LIINATSAG 196 (278)
T ss_pred EEEECCcCC
Confidence 999986443
No 477
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=94.72 E-value=0.12 Score=49.73 Aligned_cols=75 Identities=15% Similarity=0.154 Sum_probs=50.4
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
..+||+|+| +|.+|..++..|...|. .++.++.+.. ++.......+.. ..+....++.+.+.++|
T Consensus 180 ~~kkvlviG-aG~~a~~va~~L~~~g~------~~I~V~nRt~--~ra~~La~~~~~------~~~~~~~~l~~~l~~aD 244 (414)
T PRK13940 180 SSKNVLIIG-AGQTGELLFRHVTALAP------KQIMLANRTI--EKAQKITSAFRN------ASAHYLSELPQLIKKAD 244 (414)
T ss_pred cCCEEEEEc-CcHHHHHHHHHHHHcCC------CEEEEECCCH--HHHHHHHHHhcC------CeEecHHHHHHHhccCC
Confidence 357899999 69999999999988775 2789998753 233222222110 12222345677789999
Q ss_pred EEEEecCCCC
Q 019990 84 IAVMVGGFPR 93 (332)
Q Consensus 84 iVi~~ag~~~ 93 (332)
+||.+.+.|.
T Consensus 245 iVI~aT~a~~ 254 (414)
T PRK13940 245 IIIAAVNVLE 254 (414)
T ss_pred EEEECcCCCC
Confidence 9999876653
No 478
>PRK07574 formate dehydrogenase; Provisional
Probab=94.68 E-value=0.13 Score=48.96 Aligned_cols=66 Identities=18% Similarity=0.217 Sum_probs=46.3
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
..++|+|+| .|.||+.++..|..-+. +|+.+|+.... . +.... .++....++.+.++.||
T Consensus 191 ~gktVGIvG-~G~IG~~vA~~l~~fG~-------~V~~~dr~~~~---~----~~~~~-----~g~~~~~~l~ell~~aD 250 (385)
T PRK07574 191 EGMTVGIVG-AGRIGLAVLRRLKPFDV-------KLHYTDRHRLP---E----EVEQE-----LGLTYHVSFDSLVSVCD 250 (385)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCC-------EEEEECCCCCc---h----hhHhh-----cCceecCCHHHHhhcCC
Confidence 347899999 79999999999987665 89999975310 0 01000 01222356888899999
Q ss_pred EEEEec
Q 019990 84 IAVMVG 89 (332)
Q Consensus 84 iVi~~a 89 (332)
+|++..
T Consensus 251 vV~l~l 256 (385)
T PRK07574 251 VVTIHC 256 (385)
T ss_pred EEEEcC
Confidence 999874
No 479
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=94.67 E-value=0.079 Score=49.59 Aligned_cols=70 Identities=20% Similarity=0.333 Sum_probs=40.9
Q ss_pred EEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEe-CCHHHHhCCCcEE
Q 019990 7 RVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVAT-TDVVEACKDVNIA 85 (332)
Q Consensus 7 kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~-~~~~~a~~~aDiV 85 (332)
||+|+||+|.+|..|+..|.+.++- ..++.++..... .+....+. ..++... .+ .++++++|+|
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp----~~~l~~~as~~~----~g~~~~~~------~~~~~~~~~~-~~~~~~~D~v 65 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFP----IDKLVLLASDRS----AGRKVTFK------GKELEVNEAK-IESFEGIDIA 65 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCC----hhhEEEEecccc----CCCeeeeC------CeeEEEEeCC-hHHhcCCCEE
Confidence 6899999999999999988775441 135665544221 12111111 0122221 12 2456889999
Q ss_pred EEecCC
Q 019990 86 VMVGGF 91 (332)
Q Consensus 86 i~~ag~ 91 (332)
|+++|.
T Consensus 66 ~~a~g~ 71 (339)
T TIGR01296 66 LFSAGG 71 (339)
T ss_pred EECCCH
Confidence 988653
No 480
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=94.67 E-value=0.34 Score=46.13 Aligned_cols=28 Identities=36% Similarity=0.648 Sum_probs=25.4
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhccc
Q 019990 3 KNPLRVLVTGAAGQIGYALVPMIARGIM 30 (332)
Q Consensus 3 ~~~~kI~VtGaaG~IGs~l~~~L~~~~~ 30 (332)
.++..|+|+||+|.+|+-++..|++.|+
T Consensus 77 ~~~~~VlVvGatG~vG~~iv~~llkrgf 104 (411)
T KOG1203|consen 77 KKPTTVLVVGATGKVGRRIVKILLKRGF 104 (411)
T ss_pred CCCCeEEEecCCCchhHHHHHHHHHCCC
Confidence 3578899999999999999999999886
No 481
>PRK08605 D-lactate dehydrogenase; Validated
Probab=94.62 E-value=0.11 Score=48.51 Aligned_cols=62 Identities=26% Similarity=0.253 Sum_probs=43.4
Q ss_pred CcEEEEEcCCChhHHHHHHHHHh-cccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 5 PLRVLVTGAAGQIGYALVPMIAR-GIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~-~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
.++|+|+| .|.||+.++..|.. .+. +|..+|..... . ... .+....++.++++++|
T Consensus 146 g~~VgIIG-~G~IG~~vA~~L~~~~g~-------~V~~~d~~~~~-~-------~~~-------~~~~~~~l~ell~~aD 202 (332)
T PRK08605 146 DLKVAVIG-TGRIGLAVAKIFAKGYGS-------DVVAYDPFPNA-K-------AAT-------YVDYKDTIEEAVEGAD 202 (332)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhcCCC-------EEEEECCCccH-h-------HHh-------hccccCCHHHHHHhCC
Confidence 57899999 79999999999853 333 78889875321 0 111 0122346788899999
Q ss_pred EEEEec
Q 019990 84 IAVMVG 89 (332)
Q Consensus 84 iVi~~a 89 (332)
+|+++.
T Consensus 203 vIvl~l 208 (332)
T PRK08605 203 IVTLHM 208 (332)
T ss_pred EEEEeC
Confidence 999875
No 482
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.57 E-value=0.15 Score=46.34 Aligned_cols=56 Identities=14% Similarity=0.235 Sum_probs=43.1
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
..++|+|+|.++.||..++..|...+. .|.+++.. +.++.+.++.||
T Consensus 157 ~Gk~vvViGrs~iVGkPla~lL~~~~a-------tVt~~hs~--------------------------t~~l~~~~~~AD 203 (285)
T PRK14189 157 RGAHAVVIGRSNIVGKPMAMLLLQAGA-------TVTICHSK--------------------------TRDLAAHTRQAD 203 (285)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCC-------EEEEecCC--------------------------CCCHHHHhhhCC
Confidence 457999999888889999999987764 66665431 135667789999
Q ss_pred EEEEecCCC
Q 019990 84 IAVMVGGFP 92 (332)
Q Consensus 84 iVi~~ag~~ 92 (332)
+||...|.+
T Consensus 204 IVV~avG~~ 212 (285)
T PRK14189 204 IVVAAVGKR 212 (285)
T ss_pred EEEEcCCCc
Confidence 999988754
No 483
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=94.57 E-value=0.13 Score=45.76 Aligned_cols=75 Identities=23% Similarity=0.263 Sum_probs=42.8
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcE
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNI 84 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDi 84 (332)
|+||+|.||+|.+|+.++..+.+..-+ .-+..+|.... ...+ .|..+........+....++.....++|+
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~-----~L~aa~~~~~~--~~~g--~d~ge~~g~~~~gv~v~~~~~~~~~~~DV 72 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEAPDL-----ELVAAFDRPGS--LSLG--SDAGELAGLGLLGVPVTDDLLLVKADADV 72 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcCCCc-----eEEEEEecCCc--cccc--cchhhhccccccCceeecchhhcccCCCE
Confidence 689999999999999999998876522 12345665432 1111 12111111111233344455556678888
Q ss_pred EEEe
Q 019990 85 AVMV 88 (332)
Q Consensus 85 Vi~~ 88 (332)
+|=.
T Consensus 73 ~IDF 76 (266)
T COG0289 73 LIDF 76 (266)
T ss_pred EEEC
Confidence 8753
No 484
>PRK13243 glyoxylate reductase; Reviewed
Probab=94.55 E-value=0.12 Score=48.16 Aligned_cols=63 Identities=14% Similarity=0.040 Sum_probs=45.1
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcE
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNI 84 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDi 84 (332)
.++|+|+| .|.||+.++..|...|. +|..+|+.... . . +... .+. ..++.+.+++||+
T Consensus 150 gktvgIiG-~G~IG~~vA~~l~~~G~-------~V~~~d~~~~~--~--~--~~~~-------~~~-~~~l~ell~~aDi 207 (333)
T PRK13243 150 GKTIGIIG-FGRIGQAVARRAKGFGM-------RILYYSRTRKP--E--A--EKEL-------GAE-YRPLEELLRESDF 207 (333)
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHCCC-------EEEEECCCCCh--h--h--HHHc-------CCE-ecCHHHHHhhCCE
Confidence 57999999 79999999999987765 89999975311 0 0 0000 111 2467788999999
Q ss_pred EEEec
Q 019990 85 AVMVG 89 (332)
Q Consensus 85 Vi~~a 89 (332)
|+++.
T Consensus 208 V~l~l 212 (333)
T PRK13243 208 VSLHV 212 (333)
T ss_pred EEEeC
Confidence 99875
No 485
>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein. This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.
Probab=94.48 E-value=0.88 Score=41.93 Aligned_cols=58 Identities=22% Similarity=0.160 Sum_probs=38.0
Q ss_pred hHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhh-hhHhhhhhhccCCccceEEeCCHHHHhCCCcEEEEec
Q 019990 17 IGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALN-GVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVG 89 (332)
Q Consensus 17 IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~-~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDiVi~~a 89 (332)
-|+++|.+|++.|+ +|.++|++. +... .....+.+. ......+..++.+++|+||.+-
T Consensus 31 gGspMArnLlkAGh-------eV~V~Drnr--sa~e~e~~e~Laea------GA~~AaS~aEAAa~ADVVIL~L 89 (341)
T TIGR01724 31 GGSRMAIEFAMAGH-------DVVLAEPNR--EFMSDDLWKKVEDA------GVKVVSDDKEAAKHGEIHVLFT 89 (341)
T ss_pred CHHHHHHHHHHCCC-------EEEEEeCCh--hhhhhhhhHHHHHC------CCeecCCHHHHHhCCCEEEEec
Confidence 48899999998886 899999753 1221 111223221 2333456778899999999874
No 486
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.47 E-value=0.14 Score=46.37 Aligned_cols=57 Identities=14% Similarity=0.244 Sum_probs=44.5
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
..++|+|+|.+|.+|..++..|++.+. +|.++... +.++.+.+++||
T Consensus 157 ~Gk~v~vIG~S~ivG~Pla~lL~~~ga-------tVtv~~s~--------------------------t~~l~~~~~~AD 203 (284)
T PRK14179 157 EGKHAVVIGRSNIVGKPMAQLLLDKNA-------TVTLTHSR--------------------------TRNLAEVARKAD 203 (284)
T ss_pred CCCEEEEECCCCcCcHHHHHHHHHCCC-------EEEEECCC--------------------------CCCHHHHHhhCC
Confidence 467999999889999999999998775 67776321 124567789999
Q ss_pred EEEEecCCCC
Q 019990 84 IAVMVGGFPR 93 (332)
Q Consensus 84 iVi~~ag~~~ 93 (332)
+||...|.+.
T Consensus 204 IVI~avg~~~ 213 (284)
T PRK14179 204 ILVVAIGRGH 213 (284)
T ss_pred EEEEecCccc
Confidence 9999888653
No 487
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.46 E-value=0.16 Score=46.09 Aligned_cols=57 Identities=19% Similarity=0.328 Sum_probs=44.3
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
..++|+|+|.+..||..++..|.+.+- .|.++... +.++.+.++.||
T Consensus 154 ~Gk~vvViGrS~iVGkPla~lL~~~~a-------TVtichs~--------------------------T~~l~~~~~~AD 200 (287)
T PRK14173 154 AGKEVVVVGRSNIVGKPLAALLLREDA-------TVTLAHSK--------------------------TQDLPAVTRRAD 200 (287)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCC-------EEEEeCCC--------------------------CCCHHHHHhhCC
Confidence 467999999999999999999987653 67766542 124566788999
Q ss_pred EEEEecCCCC
Q 019990 84 IAVMVGGFPR 93 (332)
Q Consensus 84 iVi~~ag~~~ 93 (332)
+||..+|.|.
T Consensus 201 IvIsAvGkp~ 210 (287)
T PRK14173 201 VLVVAVGRPH 210 (287)
T ss_pred EEEEecCCcC
Confidence 9999988663
No 488
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=94.45 E-value=0.058 Score=43.25 Aligned_cols=34 Identities=32% Similarity=0.547 Sum_probs=29.1
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecc
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIE 45 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~ 45 (332)
..||+|+| +|.+|+.++..|...|+ + ++.++|.+
T Consensus 2 ~~~v~iiG-~G~vGs~va~~L~~~Gv-~-----~i~lvD~d 35 (135)
T PF00899_consen 2 NKRVLIIG-AGGVGSEVAKNLARSGV-G-----KITLVDDD 35 (135)
T ss_dssp T-EEEEES-TSHHHHHHHHHHHHHTT-S-----EEEEEESS
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHhCC-C-----ceeecCCc
Confidence 46899999 79999999999999886 2 89999974
No 489
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=94.43 E-value=0.35 Score=49.09 Aligned_cols=140 Identities=12% Similarity=0.173 Sum_probs=76.1
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccC-CccceEEeCCHHHH-hCCC
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFP-LLKGVVATTDVVEA-CKDV 82 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~-~~~~v~~~~~~~~a-~~~a 82 (332)
..+|.|+| .|.+|+.++..|.+.++ +++++|.+. ++.+ .+.+...+ +.+|.+..+-++++ +.++
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~~~g~-------~vvvID~d~--~~v~----~~~~~g~~v~~GDat~~~~L~~agi~~A 465 (621)
T PRK03562 400 QPRVIIAG-FGRFGQIVGRLLLSSGV-------KMTVLDHDP--DHIE----TLRKFGMKVFYGDATRMDLLESAGAAKA 465 (621)
T ss_pred cCcEEEEe-cChHHHHHHHHHHhCCC-------CEEEEECCH--HHHH----HHHhcCCeEEEEeCCCHHHHHhcCCCcC
Confidence 46899999 79999999999998775 789999864 2222 22221111 12333332223322 5688
Q ss_pred cEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCChhhHHHHHHHHCCCCCCCcEEEeecccHH
Q 019990 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHN 162 (332)
Q Consensus 83 DiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~~~~~~~~~~~~~~~~~~~i~~~t~l~~~ 162 (332)
|.||.+-+ .+ +.|. .++..+++.. |+.++++-++... ....+.+ ...+.+.--+.-.+.
T Consensus 466 ~~vvv~~~------d~-----~~n~----~i~~~ar~~~-p~~~iiaRa~d~~-~~~~L~~----~Gad~v~~e~~e~sl 524 (621)
T PRK03562 466 EVLINAID------DP-----QTSL----QLVELVKEHF-PHLQIIARARDVD-HYIRLRQ----AGVEKPERETFEGAL 524 (621)
T ss_pred CEEEEEeC------CH-----HHHH----HHHHHHHHhC-CCCeEEEEECCHH-HHHHHHH----CCCCEEehhhHhHHH
Confidence 98888732 11 2343 3445566654 7777665454322 1233333 122333333444455
Q ss_pred HHHHHHHHHcCCCCCCe
Q 019990 163 RAMGQISERLKVHVSDV 179 (332)
Q Consensus 163 r~~~~~a~~~~v~~~~v 179 (332)
++....-+.+|+++..+
T Consensus 525 ~l~~~~L~~lg~~~~~~ 541 (621)
T PRK03562 525 KSGRLVLESLGLGPYEA 541 (621)
T ss_pred HHHHHHHHHcCCCHHHH
Confidence 55556666667665443
No 490
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=94.43 E-value=0.15 Score=49.30 Aligned_cols=73 Identities=21% Similarity=0.278 Sum_probs=48.1
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
..++|+|+| +|.+|..++..|...|. .++.+++++. +++.....++. .++....++.+++.++|
T Consensus 181 ~~~~vlViG-aG~iG~~~a~~L~~~G~------~~V~v~~r~~--~ra~~la~~~g-------~~~~~~~~~~~~l~~aD 244 (423)
T PRK00045 181 SGKKVLVIG-AGEMGELVAKHLAEKGV------RKITVANRTL--ERAEELAEEFG-------GEAIPLDELPEALAEAD 244 (423)
T ss_pred cCCEEEEEC-chHHHHHHHHHHHHCCC------CeEEEEeCCH--HHHHHHHHHcC-------CcEeeHHHHHHHhccCC
Confidence 457899999 69999999999987664 2788898853 22222221111 12222245567788999
Q ss_pred EEEEecCCC
Q 019990 84 IAVMVGGFP 92 (332)
Q Consensus 84 iVi~~ag~~ 92 (332)
+||.+.+.+
T Consensus 245 vVI~aT~s~ 253 (423)
T PRK00045 245 IVISSTGAP 253 (423)
T ss_pred EEEECCCCC
Confidence 999886654
No 491
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.39 E-value=0.17 Score=46.23 Aligned_cols=56 Identities=18% Similarity=0.364 Sum_probs=44.0
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
..++|+|+|.+|.+|..++..|+..+. ++.+++.+. .++.+.++.||
T Consensus 157 ~Gk~V~viGrs~~mG~PmA~~L~~~g~-------tVtv~~~rT--------------------------~~l~e~~~~AD 203 (296)
T PRK14188 157 SGLNAVVIGRSNLVGKPMAQLLLAANA-------TVTIAHSRT--------------------------RDLPAVCRRAD 203 (296)
T ss_pred CCCEEEEEcCCcchHHHHHHHHHhCCC-------EEEEECCCC--------------------------CCHHHHHhcCC
Confidence 468999999999999999999998775 788886421 12456678899
Q ss_pred EEEEecCCC
Q 019990 84 IAVMVGGFP 92 (332)
Q Consensus 84 iVi~~ag~~ 92 (332)
+||.+.|.+
T Consensus 204 IVIsavg~~ 212 (296)
T PRK14188 204 ILVAAVGRP 212 (296)
T ss_pred EEEEecCCh
Confidence 999887654
No 492
>PLN03129 NADP-dependent malic enzyme; Provisional
Probab=94.38 E-value=0.13 Score=50.96 Aligned_cols=111 Identities=18% Similarity=0.272 Sum_probs=66.1
Q ss_pred CcEEEEEcCCChhHHHHHHHHHh-----cccCCCCCCeEEEEEecccchhhhhhhHhh-hhhhccCCccceEEeCCHHHH
Q 019990 5 PLRVLVTGAAGQIGYALVPMIAR-----GIMLGPDQPVILHMLDIEPAAEALNGVKME-LIDAAFPLLKGVVATTDVVEA 78 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~-----~~~~~~~~~~~i~l~D~~~~~~~~~~~~~d-l~~~~~~~~~~v~~~~~~~~a 78 (332)
..||++.| +|..|..++..|+. .|+...+-..++.++|.+.. +.....| +.+...++..+.....++.++
T Consensus 321 d~riv~~G-AGsAgigia~ll~~~~~~~~Gls~eeA~~~i~~vD~~GL---i~~~r~~~l~~~k~~fa~~~~~~~~L~e~ 396 (581)
T PLN03129 321 DQRILFAG-AGEAGTGIAELIALAMSRQTGISEEEARKRIWLVDSKGL---VTKSRKDSLQPFKKPFAHDHEPGASLLEA 396 (581)
T ss_pred hceEEEEC-CCHHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEcCCCe---EeCCCCccChHHHHHHHhhcccCCCHHHH
Confidence 46899999 69999999998876 24422112337899997541 1111111 221111122222223578999
Q ss_pred hCC--CcEEEEecCCCCCCCCChhHHHhhhHHHHHHHHHHHHhhcCCCcEEEEEeCCh
Q 019990 79 CKD--VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPA 134 (332)
Q Consensus 79 ~~~--aDiVi~~ag~~~~~~~~~~~~~~~N~~~~~~i~~~i~~~~~~~~~viv~snp~ 134 (332)
+++ +|++|=+.+.+ | .+ .+++++.+.+++ +..+|.-.|||.
T Consensus 397 v~~vkptvLIG~S~~~---g-----~F------t~evi~~Ma~~~-~rPIIFaLSNPt 439 (581)
T PLN03129 397 VKAIKPTVLIGLSGVG---G-----TF------TKEVLEAMASLN-ERPIIFALSNPT 439 (581)
T ss_pred HhccCCCEEEEecCCC---C-----CC------CHHHHHHHHhcC-CCCEEEECCCCC
Confidence 998 79888654432 1 11 246677777776 556777789996
No 493
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=94.34 E-value=0.077 Score=50.17 Aligned_cols=33 Identities=24% Similarity=0.226 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCChhHHH--HHHHHHhcccCCCCCCeEEEEEec
Q 019990 4 NPLRVLVTGAAGQIGYA--LVPMIARGIMLGPDQPVILHMLDI 44 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~--l~~~L~~~~~~~~~~~~~i~l~D~ 44 (332)
.+++++||||++.+|.+ ++..| ..|. .+.+++.
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA-------~Vi~v~~ 74 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GAGA-------DTLGVFF 74 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-HcCC-------eEEEEec
Confidence 35799999999999999 78888 7664 5666664
No 494
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=94.34 E-value=0.1 Score=48.16 Aligned_cols=24 Identities=33% Similarity=0.589 Sum_probs=21.7
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhc
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARG 28 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~ 28 (332)
+++|+|+||+|.||+.++..|.+.
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~ 24 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEER 24 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhc
Confidence 468999999999999999999874
No 495
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=94.34 E-value=0.17 Score=43.19 Aligned_cols=77 Identities=10% Similarity=0.116 Sum_probs=49.0
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEE-eCCHHHHhCCC
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVA-TTDVVEACKDV 82 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~-~~~~~~a~~~a 82 (332)
..++|+|+|.+.-+|..++..|++.+- .|.++|++.......+. .+.|.. ..... ..++.+.++.|
T Consensus 61 ~GK~vvVIGrS~iVGkPla~lL~~~~A-------tVti~~~~~~~~~~~~~--~~~hs~----t~~~~~~~~l~~~~~~A 127 (197)
T cd01079 61 YGKTITIINRSEVVGRPLAALLANDGA-------RVYSVDINGIQVFTRGE--SIRHEK----HHVTDEEAMTLDCLSQS 127 (197)
T ss_pred CCCEEEEECCCccchHHHHHHHHHCCC-------EEEEEecCccccccccc--cccccc----ccccchhhHHHHHhhhC
Confidence 467999999999999999999988764 89999875311000000 011110 00000 11266778999
Q ss_pred cEEEEecCCCC
Q 019990 83 NIAVMVGGFPR 93 (332)
Q Consensus 83 DiVi~~ag~~~ 93 (332)
|+||...|.+.
T Consensus 128 DIVIsAvG~~~ 138 (197)
T cd01079 128 DVVITGVPSPN 138 (197)
T ss_pred CEEEEccCCCC
Confidence 99999988654
No 496
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=94.33 E-value=0.2 Score=41.36 Aligned_cols=66 Identities=20% Similarity=0.115 Sum_probs=41.1
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
+.++|+|+| -|.-|.+.+..|...++ +|.+-.+.... ....+ ..+ .+. ..+..++.+.+|
T Consensus 3 ~~k~IAViG-yGsQG~a~AlNLrDSG~-------~V~Vglr~~s~--s~~~A--~~~-------Gf~-v~~~~eAv~~aD 62 (165)
T PF07991_consen 3 KGKTIAVIG-YGSQGHAHALNLRDSGV-------NVIVGLREGSA--SWEKA--KAD-------GFE-VMSVAEAVKKAD 62 (165)
T ss_dssp CTSEEEEES--SHHHHHHHHHHHHCC--------EEEEEE-TTCH--HHHHH--HHT-------T-E-CCEHHHHHHC-S
T ss_pred CCCEEEEEC-CChHHHHHHHHHHhCCC-------CEEEEecCCCc--CHHHH--HHC-------CCe-eccHHHHHhhCC
Confidence 467999999 69999999999999886 67666654321 11111 111 122 236788999999
Q ss_pred EEEEec
Q 019990 84 IAVMVG 89 (332)
Q Consensus 84 iVi~~a 89 (332)
+|+++.
T Consensus 63 vV~~L~ 68 (165)
T PF07991_consen 63 VVMLLL 68 (165)
T ss_dssp EEEE-S
T ss_pred EEEEeC
Confidence 999973
No 497
>KOG0409 consensus Predicted dehydrogenase [General function prediction only]
Probab=94.33 E-value=0.15 Score=46.12 Aligned_cols=67 Identities=16% Similarity=0.229 Sum_probs=49.1
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCcE
Q 019990 5 PLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNI 84 (332)
Q Consensus 5 ~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDi 84 (332)
.++|..+| -|..|++.+.+|+..|+ .|+++|+.. + ...++.+.. -+......|..+++|+
T Consensus 35 ~~~iGFIG-LG~MG~~M~~nLik~G~-------kVtV~dr~~--~----k~~~f~~~G------a~v~~sPaeVae~sDv 94 (327)
T KOG0409|consen 35 KTRIGFIG-LGNMGSAMVSNLIKAGY-------KVTVYDRTK--D----KCKEFQEAG------ARVANSPAEVAEDSDV 94 (327)
T ss_pred cceeeEEe-eccchHHHHHHHHHcCC-------EEEEEeCcH--H----HHHHHHHhc------hhhhCCHHHHHhhcCE
Confidence 57899999 99999999999999987 899999853 2 223444321 1223455677789999
Q ss_pred EEEecCC
Q 019990 85 AVMVGGF 91 (332)
Q Consensus 85 Vi~~ag~ 91 (332)
||...+.
T Consensus 95 vitmv~~ 101 (327)
T KOG0409|consen 95 VITMVPN 101 (327)
T ss_pred EEEEcCC
Confidence 9987654
No 498
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=94.30 E-value=0.22 Score=45.64 Aligned_cols=68 Identities=18% Similarity=0.147 Sum_probs=45.8
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
..+||+|+| .|.+|..++..|...|. +|.++|++.. .. ....++ . .......++.+.++++|
T Consensus 151 ~g~kvlViG-~G~iG~~~a~~L~~~Ga-------~V~v~~r~~~--~~-~~~~~~---G----~~~~~~~~l~~~l~~aD 212 (296)
T PRK08306 151 HGSNVLVLG-FGRTGMTLARTLKALGA-------NVTVGARKSA--HL-ARITEM---G----LSPFHLSELAEEVGKID 212 (296)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCC-------EEEEEECCHH--HH-HHHHHc---C----CeeecHHHHHHHhCCCC
Confidence 368999999 69999999999988774 8999998632 11 111111 0 01111235667789999
Q ss_pred EEEEec
Q 019990 84 IAVMVG 89 (332)
Q Consensus 84 iVi~~a 89 (332)
+||.+.
T Consensus 213 iVI~t~ 218 (296)
T PRK08306 213 IIFNTI 218 (296)
T ss_pred EEEECC
Confidence 999974
No 499
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=94.30 E-value=0.16 Score=46.93 Aligned_cols=64 Identities=9% Similarity=0.132 Sum_probs=45.5
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhcccCCCCCCeEEEEEecccchhhhhhhHhhhhhhccCCccceEEeCCHHHHhCCCc
Q 019990 4 NPLRVLVTGAAGQIGYALVPMIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 83 (332)
Q Consensus 4 ~~~kI~VtGaaG~IGs~l~~~L~~~~~~~~~~~~~i~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (332)
..++|+|+| .|.||+.++..|..-|. +|..+|.... ...+ .. .+....++.+.+++||
T Consensus 135 ~g~tvgIvG-~G~IG~~vA~~l~afG~-------~V~~~~~~~~--~~~~----~~--------~~~~~~~l~e~l~~aD 192 (312)
T PRK15469 135 EDFTIGILG-AGVLGSKVAQSLQTWGF-------PLRCWSRSRK--SWPG----VQ--------SFAGREELSAFLSQTR 192 (312)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEEeCCCC--CCCC----ce--------eecccccHHHHHhcCC
Confidence 357899999 89999999999998775 8889986421 1100 00 0111346788899999
Q ss_pred EEEEec
Q 019990 84 IAVMVG 89 (332)
Q Consensus 84 iVi~~a 89 (332)
+|+++.
T Consensus 193 vvv~~l 198 (312)
T PRK15469 193 VLINLL 198 (312)
T ss_pred EEEECC
Confidence 999874
No 500
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=94.26 E-value=0.17 Score=47.45 Aligned_cols=24 Identities=38% Similarity=0.632 Sum_probs=21.2
Q ss_pred cEEEEEcCCChhHHHHHHHHHhcc
Q 019990 6 LRVLVTGAAGQIGYALVPMIARGI 29 (332)
Q Consensus 6 ~kI~VtGaaG~IGs~l~~~L~~~~ 29 (332)
+||+|+||+|++|++++..|...+
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~ 24 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHP 24 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC
Confidence 479999999999999999887755
Done!