BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019991
(332 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3ZBF9|PLPP_BOVIN Pyridoxal phosphate phosphatase OS=Bos taurus GN=PDXP PE=1 SV=1
Length = 296
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGF 87
R + L D GVL +G++ PGA LE LA G + +SN+SRRA + + LGF
Sbjct: 18 RAQGVLFDCNGVLWNGERAVPGAPELLERLAQAGKATLFVSNNSRRARPELALRFARLGF 77
Query: 88 ----DPSLFAGAITSGELTHQYLLRRDDAWFA 115
LF+ A+ + L Q LL D A
Sbjct: 78 GGLRSEQLFSSALCAARLLRQRLLGPPDTQGA 109
>sp|Q96GD0|PLPP_HUMAN Pyridoxal phosphate phosphatase OS=Homo sapiens GN=PDXP PE=1 SV=2
Length = 296
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGF 87
R + L D GVL +G++ PGA LE LA G + +SN+SRRA + + LGF
Sbjct: 18 RAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGF 77
Query: 88 D----PSLFAGAITSGELTHQYLLRRDDA 112
LF+ A+ + L Q L DA
Sbjct: 78 GGLRAEQLFSSALCAARLLRQRLPGPPDA 106
>sp|Q00472|PNPP_SCHPO 4-nitrophenylphosphatase OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=pho2 PE=4 SV=2
Length = 298
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRA-STTIDKLKSLGF 87
+F +L D GVL G KP PG T+++L + G +++ +SN+S ++ T ++K+ G
Sbjct: 17 KFDVFLFDCDGVLWSGSKPIPGVTDTMKLLRSLGKQIIFVSNNSTKSRETYMNKINEHGI 76
Query: 88 DPSL---FAGAITSGELTHQYLLRRDDAWFAALGRSCIH 123
L + A +S + L D LG + I
Sbjct: 77 AAKLEEIYPSAYSSATYVKKVLKLPADKKVFVLGEAGIE 115
>sp|P34492|YMQ1_CAEEL Putative NipSnap protein K02D10.1 OS=Caenorhabditis elegans
GN=K02D10.1 PE=2 SV=4
Length = 526
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 81/214 (37%), Gaps = 15/214 (7%)
Query: 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVI--SNSSRRASTTIDKLKSLG 86
+ +L D GVL G P PGAI + +L +K V + +NS++ + K++ LG
Sbjct: 14 NYDTFLFDADGVLWTGDIPVPGAIEWINLLLEDPSKKVFVLTNNSTKTLEQYMKKIEKLG 73
Query: 87 FDPSLFAGAITSGELTHQYLLRRDDAWFAA----LGRSCIHMTWSDRGAISLEGLGLKVV 142
F I+ + YL D + +G + T + G + G G +
Sbjct: 74 FGHLGRNNVISPAIVLADYLKSNADKFSGEYVYLIGTENLKATLENDGGVKCFGTGPDSI 133
Query: 143 ENVEEADFILAHGTEGMGLPSGDV----RPMSLQDLEKILEICASKKIPMVVANPDYVTV 198
+ + DFI H + P V S + K + +V N DY
Sbjct: 134 RDHTDGDFI--HKVDMSIAPKAVVCSYDAHFSYPKIMKASNYLQDPSVEYLVTNQDYTFP 191
Query: 199 EARALRVMPG---TLASKFEKLGGEVRWMGKPDK 229
V+PG T A+ G + + GKP K
Sbjct: 192 GPVPGVVIPGSGATSAAVTAVTGRDPKVFGKPHK 225
>sp|Q8VD52|PLPP_RAT Pyridoxal phosphate phosphatase OS=Rattus norvegicus GN=Pdxp PE=1
SV=2
Length = 309
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 31 KAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGFD- 88
+ L D GVL +G++ PGA L+ LA G + +SN+SRRA + + LGF
Sbjct: 20 QGVLFDCDGVLWNGERIVPGAPELLQRLAQAGKATLFVSNNSRRARPELALRFARLGFTG 79
Query: 89 ---PSLFAGAITSGELTHQYLLRRDDA 112
LF+ A+ + L Q L DA
Sbjct: 80 LRAEELFSSAVCAARLLRQRLPGPPDA 106
>sp|P60487|PLPP_MOUSE Pyridoxal phosphate phosphatase OS=Mus musculus GN=Pdxp PE=1 SV=1
Length = 292
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 31 KAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGF-- 87
+ L D GVL +G++ PGA L+ LA G + +SN+SRRA + + LGF
Sbjct: 20 QGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNNSRRARPELALRFARLGFAG 79
Query: 88 --DPSLFAGAITSGELTHQYLLRRDDA 112
LF+ A+ + L Q L DA
Sbjct: 80 LRAEQLFSSALCAARLLRQRLSGPPDA 106
>sp|Q2T9S4|PGP_BOVIN Phosphoglycolate phosphatase OS=Bos taurus GN=PGP PE=2 SV=1
Length = 321
Score = 37.0 bits (84), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 18 LNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVIS-NSSRRAS 76
LN R A L D GVL G+ PGA TL L G ++ I+ NSS+
Sbjct: 16 LNAERAQALLADVDTLLFDCDGVLWRGETAVPGAPETLTALRARGKRLAFITNNSSKTRE 75
Query: 77 TTIDKLKSLGF 87
+KL+ LGF
Sbjct: 76 AYAEKLRCLGF 86
>sp|Q8CHP8|PGP_MOUSE Phosphoglycolate phosphatase OS=Mus musculus GN=Pgp PE=2 SV=1
Length = 321
Score = 36.6 bits (83), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 34 LLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTT-IDKLKSLGF 87
L D GVL G+ PGA TL L G ++ I+N+S + T +KL+ LGF
Sbjct: 32 LFDCDGVLWRGETAVPGAPETLRALRARGKRLGFITNNSSKTRTAYAEKLRRLGF 86
>sp|Q3ZCH9|HDHD2_BOVIN Haloacid dehalogenase-like hydrolase domain-containing protein 2
OS=Bos taurus GN=HDHD2 PE=2 SV=1
Length = 259
Score = 36.6 bits (83), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 24 IAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTT-IDKL 82
+A R KA L+D G LH PGA L+ L T + ++N+++ + +++L
Sbjct: 1 MATRRALKAVLVDLSGTLHIEDAAVPGAQEALKRLRATSVMVRFVTNTTKESKQDLLERL 60
Query: 83 KSLGFDPS---LFAGAITSGELTHQYLLR 108
K L FD S +F + L Q +R
Sbjct: 61 KKLEFDISEDEIFTSLTAARNLVEQKQVR 89
>sp|O32125|YUTF_BACSU Uncharacterized hydrolase YutF OS=Bacillus subtilis (strain 168)
GN=yutF PE=1 SV=1
Length = 256
Score = 35.4 bits (80), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 15/128 (11%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAK-MVVISNSSRRASTTIDKLKSLG 86
+ +K +L+D G +++G + A + L G + V +NSSR DKL S
Sbjct: 2 KTYKGYLIDLDGTMYNGTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVS-- 59
Query: 87 FD-PSLFAGAITSGELTHQYLL-RRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVEN 144
FD P+ T+ T Q++ ++ DA +G I R AI GL
Sbjct: 60 FDIPATEEQVFTTSMATAQHIAQQKKDASVYVIGEEGI------RQAIEENGLTF----G 109
Query: 145 VEEADFIL 152
E ADF++
Sbjct: 110 GENADFVV 117
>sp|Q3UGR5|HDHD2_MOUSE Haloacid dehalogenase-like hydrolase domain-containing protein 2
OS=Mus musculus GN=Hdhd2 PE=1 SV=2
Length = 259
Score = 35.0 bits (79), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 24 IAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTT-IDKL 82
+A R KA L+D G LH PGA L+ L T + ++N+++ + +++L
Sbjct: 1 MAARRALKAVLVDLNGTLHIEDAAVPGAQEALKRLRATSVMVRFVTNTTKESKKDLLERL 60
Query: 83 KSLGFDPS---LFAGAITSGELTHQYLLR 108
K L F+ S +F + L Q +R
Sbjct: 61 KKLEFEISEDEIFTSLTAARNLIEQKQVR 89
>sp|Q7A1D4|NAGD_STAAW Protein NagD homolog OS=Staphylococcus aureus (strain MW2) GN=nagD
PE=3 SV=1
Length = 259
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLG 86
+++KA+L+D G ++ G GA ++ L G + V +NS++ +KL+ +
Sbjct: 2 KQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREMH 61
Query: 87 FDPSLFAGAITSGELTHQYLLRRD-DAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENV 145
D + +TS T Y+ + A LG S ++ ++ G V++N
Sbjct: 62 ID-AKPEEVVTSALATADYISEQSPGASVYMLGGSGLNTALTEAGL---------VIKND 111
Query: 146 EEADFIL 152
E D+++
Sbjct: 112 EHVDYVV 118
>sp|Q6GAZ7|NAGD_STAAS Protein NagD homolog OS=Staphylococcus aureus (strain MSSA476)
GN=nagD PE=3 SV=1
Length = 259
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLG 86
+++KA+L+D G ++ G GA ++ L G + V +NS++ +KL+ +
Sbjct: 2 KQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREMH 61
Query: 87 FDPSLFAGAITSGELTHQYLLRRD-DAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENV 145
D + +TS T Y+ + A LG S ++ ++ G V++N
Sbjct: 62 ID-AKPEEVVTSALATADYISEQSPGASVYMLGGSGLNTALTEAGL---------VIKND 111
Query: 146 EEADFIL 152
E D+++
Sbjct: 112 EHVDYVV 118
>sp|Q7A6K4|NAGD_STAAN Protein NagD homolog OS=Staphylococcus aureus (strain N315) GN=nagD
PE=3 SV=1
Length = 259
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLG 86
+++KA+L+D G ++ G GA ++ L G + V +NS++ +KL+ +
Sbjct: 2 KQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREMH 61
Query: 87 FDPSLFAGAITSGELTHQYLLRRD-DAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENV 145
D + +TS T Y+ + A LG S ++ ++ G V++N
Sbjct: 62 ID-AKPEEVVTSALATADYISEQSPGASVYMLGGSGLNTALTEAGL---------VIKND 111
Query: 146 EEADFIL 152
E D+++
Sbjct: 112 EHVDYVV 118
>sp|Q99VE8|NAGD_STAAM Protein NagD homolog OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=nagD PE=1 SV=1
Length = 259
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLG 86
+++KA+L+D G ++ G GA ++ L G + V +NS++ +KL+ +
Sbjct: 2 KQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREMH 61
Query: 87 FDPSLFAGAITSGELTHQYLLRRD-DAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENV 145
D + +TS T Y+ + A LG S ++ ++ G V++N
Sbjct: 62 ID-AKPEEVVTSALATADYISEQSPGASVYMLGGSGLNTALTEAGL---------VIKND 111
Query: 146 EEADFIL 152
E D+++
Sbjct: 112 EHVDYVV 118
>sp|Q5HHF6|NAGD_STAAC Protein NagD homolog OS=Staphylococcus aureus (strain COL) GN=nagD
PE=3 SV=1
Length = 259
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLG 86
+++KA+L+D G ++ G GA ++ L G + V +NS++ +KL+ +
Sbjct: 2 KQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREMH 61
Query: 87 FDPSLFAGAITSGELTHQYLLRRD-DAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENV 145
D + +TS T Y+ + A LG S ++ ++ G V++N
Sbjct: 62 ID-AKPEEVVTSALATADYISEQSPGASVYMLGGSGLNTALTEAGL---------VIKND 111
Query: 146 EEADFIL 152
E D+++
Sbjct: 112 EHVDYVV 118
>sp|Q2FZX0|NAGD_STAA8 Protein NagD homolog OS=Staphylococcus aureus (strain NCTC 8325)
GN=nagD PE=3 SV=1
Length = 259
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLG 86
+++KA+L+D G ++ G GA ++ L G + V +NS++ +KL+ +
Sbjct: 2 KQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREMH 61
Query: 87 FDPSLFAGAITSGELTHQYLLRRD-DAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENV 145
D + +TS T Y+ + A LG S ++ ++ G V++N
Sbjct: 62 ID-AKPEEVVTSALATADYISEQSPGASVYMLGGSGLNTALTEAGL---------VIKND 111
Query: 146 EEADFIL 152
E D+++
Sbjct: 112 EHVDYVV 118
>sp|Q2FIE5|NAGD_STAA3 Protein NagD homolog OS=Staphylococcus aureus (strain USA300)
GN=nagD PE=3 SV=1
Length = 259
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLG 86
+++KA+L+D G ++ G GA ++ L G + V +NS++ +KL+ +
Sbjct: 2 KQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREMH 61
Query: 87 FDPSLFAGAITSGELTHQYLLRRD-DAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENV 145
D + +TS T Y+ + A LG S ++ ++ G V++N
Sbjct: 62 ID-AKPEEVVTSALATADYISEQSPGASVYMLGGSGLNTALTEAGL---------VIKND 111
Query: 146 EEADFIL 152
E D+++
Sbjct: 112 EHVDYVV 118
>sp|Q6GIF9|NAGD_STAAR Protein NagD homolog OS=Staphylococcus aureus (strain MRSA252)
GN=nagD PE=3 SV=1
Length = 259
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLG 86
+++KA+L+D G ++ G GA ++ L G + V +NS++ +KL+ +
Sbjct: 2 KQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREMH 61
Query: 87 FDPSLFAGAITSGELTHQYLLRRD-DAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENV 145
D + +TS T Y+ + A LG S ++ ++ G V++N
Sbjct: 62 ID-AKPEEVVTSALATADYISEQSPGASVYMLGGSGLNTALTEAGL---------VIKND 111
Query: 146 EEADFIL 152
E D+++
Sbjct: 112 EHVDYVV 118
>sp|Q2YWR1|NAGD_STAAB Protein NagD homolog OS=Staphylococcus aureus (strain bovine RF122
/ ET3-1) GN=nagD PE=3 SV=1
Length = 259
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLG 86
+++KA+L+D G ++ G GA ++ L G + V +NS++ +KL+ +
Sbjct: 2 KQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREMH 61
Query: 87 FDPSLFAGAITSGELTHQYLLRRD-DAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENV 145
D + +TS T Y+ + A LG S ++ ++ G V++N
Sbjct: 62 ID-AKPEEVVTSALATADYISEQSPGASVYMLGGSGLNTALTEAGL---------VIKND 111
Query: 146 EEADFIL 152
E D+++
Sbjct: 112 EHVDYVV 118
>sp|Q4L4U2|NAGD_STAHJ Protein NagD homolog OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=nagD PE=3 SV=1
Length = 263
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 89/218 (40%), Gaps = 24/218 (11%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLG 86
+ +K +L+D G ++ G GA ++ L + V +NS++ KLK +
Sbjct: 2 KNYKGYLIDLDGTMYLGTDEIDGAAQFIDYLNNHQIPHLYVTNNSTKTPEEVTQKLKEMN 61
Query: 87 FDPSLFAGAITSGELTHQYLL-RRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENV 145
D +TS T Y+ + DA LG + + R A++ GL +K ENV
Sbjct: 62 IDAKP-EEVVTSALATANYISDEKSDATVYMLGGNGL------RTALTEAGLTVKDDENV 114
Query: 146 EEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRV 205
D++ +GL ++ + L + + K + NPD + R
Sbjct: 115 ---DYV------AIGLDEN----VTYEKL-AVATLAVRKGARFISTNPDVSIPKERGFLP 160
Query: 206 MPGTLASKFEKLGGEV-RWMGKPDKLWATLFTMILRVQ 242
G + S G+ +++GKP+ + + IL++
Sbjct: 161 GNGAITSVVSVSTGQAPQFIGKPEPVIMDIALDILKLD 198
>sp|Q5R4B4|HDHD2_PONAB Haloacid dehalogenase-like hydrolase domain-containing protein 2
OS=Pongo abelii GN=HDHD2 PE=2 SV=1
Length = 259
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 24 IAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTT-IDKL 82
+A R KA L+D G LH PGA L+ L T + ++N+++ + +++L
Sbjct: 1 MAACRALKAVLVDLSGTLHIEDAAVPGAQEALKRLRGTSVIVRFVTNTTKESKQDLLERL 60
Query: 83 KSLGFDPS---LFAGAITSGELTHQYLLR 108
+ L FD S +F + L Q +R
Sbjct: 61 RKLEFDISEDEIFTSLTAARSLLEQKQVR 89
>sp|Q6AYR6|HDHD2_RAT Haloacid dehalogenase-like hydrolase domain-containing protein 2
OS=Rattus norvegicus GN=Hdhd2 PE=2 SV=1
Length = 259
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 24 IAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTT-IDKL 82
+A R KA L+D G LH PGA L+ L + ++N+++ + +++L
Sbjct: 1 MAARRVLKAVLVDLSGTLHIEDAAVPGAQEALKRLRAASVMVRFVTNTTKESKRDLLERL 60
Query: 83 KSLGFDPS---LFAGAITSGELTHQYLLR 108
+ L FD S +F + L Q +R
Sbjct: 61 RKLEFDISEEEIFTSLTAARNLIEQRQVR 89
>sp|O70370|CATS_MOUSE Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=2
Length = 340
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Query: 150 FILAHGTE-GMGLPSGDVRPMSLQDL--EKILEICASKKIPMVVANPDYVTVEARALRVM 206
FI+ H E MG+ + V + D+ E+IL + +IP +P VT + + R +
Sbjct: 66 FIMIHNLEYSMGMHTYQVGMNDMGDMTNEEILCRMGALRIPR--QSPKTVTFRSYSNRTL 123
Query: 207 PGTLASKFEKLGGEVRWMGKPDKLWATLFTMILRVQMQLESSPYSLLEGSMQLNLDLTVM 266
P T+ + + EV++ G WA F+ + ++ QL+ L+ S Q +D +
Sbjct: 124 PDTVDWREKGCVTEVKYQGSCGACWA--FSAVGALEGQLKLKTGKLISLSAQNLVDCSNE 181
Query: 267 EK 268
EK
Sbjct: 182 EK 183
>sp|O67359|GPH_AQUAE Phosphoglycolate phosphatase OS=Aquifex aeolicus (strain VF5)
GN=gph PE=1 SV=1
Length = 213
Score = 33.1 bits (74), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 26/55 (47%)
Query: 46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE 100
KPYP TLE L + G K+ V+SN S I + +L L G T GE
Sbjct: 81 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGE 135
>sp|Q5BJJ5|HDHD2_DANRE Haloacid dehalogenase-like hydrolase domain-containing protein 2
OS=Danio rerio GN=hdhd2 PE=2 SV=1
Length = 262
Score = 32.7 bits (73), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTI-DKLKSLG 86
R KA L+D G LH PGA L L + ++N+++ T+ ++L+ L
Sbjct: 5 RTLKAVLIDLSGTLHIEDTAVPGAQEALARLRQAPVAVKFVTNTTKECKRTLFERLRGLN 64
Query: 87 FD---PSLFAGAITSGELTHQYLLR 108
FD +F + L Q +R
Sbjct: 65 FDLQQQEIFTSLTAARNLVEQKAVR 89
>sp|Q9A5Z2|GPH_CAUCR Phosphoglycolate phosphatase OS=Caulobacter crescentus (strain ATCC
19089 / CB15) GN=gph PE=3 SV=1
Length = 237
Score = 32.7 bits (73), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 41 LHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTI 79
+ D P+PG + L L T GAK+VV +N ST +
Sbjct: 91 IADESAPFPGVVEVLSDLKTAGAKLVVCTNKLTNLSTAL 129
>sp|P46351|YTH1_PANTH Uncharacterized 45.4 kDa protein in thiaminase I 5'region
OS=Paenibacillus thiaminolyticus PE=4 SV=1
Length = 413
Score = 32.7 bits (73), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 73/185 (39%), Gaps = 27/185 (14%)
Query: 30 FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLKSLGFD 88
F +L D GV++ G + PGA+ LE L + G + ++N+ T +L LG +
Sbjct: 6 FDVFLFDLDGVIYVGPEALPGAVEALERLRSGGKTIRFLTNNPCMTREQTAARLNRLGIE 65
Query: 89 PSLFAGAITSGELTHQYLLRRDDAWFAALG-----RSC---------------IHMTWSD 128
+ I+SG T L R LG R C + + WSD
Sbjct: 66 AAKDE-VISSGWATACCLRERRAGSVYVLGDEHLERECRDAGLDIVDVNAAEAVVVGWSD 124
Query: 129 RGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPM 188
++L + V A FI + P G + M++ + +++ AS K P
Sbjct: 125 D--LTLRDIQSAVTRIANGAQFIATNADWSFPGPDGPM--MAVGTAVEAIKM-ASGKTPY 179
Query: 189 VVANP 193
+V P
Sbjct: 180 IVGKP 184
>sp|B0C218|AROA_ACAM1 3-phosphoshikimate 1-carboxyvinyltransferase OS=Acaryochloris
marina (strain MBIC 11017) GN=aroA PE=3 SV=1
Length = 446
Score = 32.3 bits (72), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 12/108 (11%)
Query: 59 ATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAW----- 113
A TG V+ S + TTI KS+ +L GA+ SGE T Q LL +D
Sbjct: 11 APTGTTWVIQSEGYLQGKTTIPGDKSISHR-ALMLGALASGETTIQGLLLGEDPRSTAHC 69
Query: 114 FAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGL 161
F ALG + + ++G+GL ++ E D +L G G L
Sbjct: 70 FRALGAEISELNTEH---VRVQGIGLG---HLLEPDVVLDAGNSGTTL 111
>sp|Q8UEY9|GPH_AGRT5 Phosphoglycolate phosphatase OS=Agrobacterium tumefaciens (strain
C58 / ATCC 33970) GN=gph PE=3 SV=2
Length = 233
Score = 32.0 bits (71), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQ 104
+PYPG I TL+ L+ G + V +N + + + L+ LG + + AIT G+
Sbjct: 93 SRPYPGIIETLDALSQAGITLAVCTNKTEILAVPL--LEKLGL--TRYFAAITCGD---T 145
Query: 105 YLLRRDDA 112
+ R+ DA
Sbjct: 146 FAFRKPDA 153
>sp|Q9H0R4|HDHD2_HUMAN Haloacid dehalogenase-like hydrolase domain-containing protein 2
OS=Homo sapiens GN=HDHD2 PE=1 SV=1
Length = 259
Score = 32.0 bits (71), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 24 IAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTT-IDKL 82
+A R KA L+D G LH PGA L+ L + ++N+++ + +++L
Sbjct: 1 MAACRALKAVLVDLSGTLHIEDAAVPGAQEALKRLRGASVIIRFVTNTTKESKQDLLERL 60
Query: 83 KSLGFDPS 90
+ L FD S
Sbjct: 61 RKLEFDIS 68
>sp|A8Z6D5|AROA_CAMC1 3-phosphoshikimate 1-carboxyvinyltransferase OS=Campylobacter
concisus (strain 13826) GN=aroA PE=3 SV=1
Length = 428
Score = 32.0 bits (71), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 15/91 (16%)
Query: 61 TGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRS 120
T AK + + S R A TI+ LK G D S EL +++ +A FA +
Sbjct: 330 TNAKELRVKESDRIA-VTINALKQCGVDAS---------ELEDGFIINGSEAKFATIDSH 379
Query: 121 CIHMTWSDRGAISLEGLGLKVVENVEEADFI 151
H R A+S LGLK +E+++FI
Sbjct: 380 GDH-----RIAMSFAILGLKCGMQIEKSEFI 405
>sp|P25774|CATS_HUMAN Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3
Length = 331
Score = 31.6 bits (70), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 150 FILAHGTE-GMGLPSGDVRPMSLQDL--EKILEICASKKIPMVVANPDYVTVEARALRVM 206
F++ H E MG+ S D+ L D+ E+++ + +S ++P +T ++ R++
Sbjct: 58 FVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQWQRN--ITYKSNPNRIL 115
Query: 207 PGTLASKFEKLGGEVRWMGKPDKLWATLFTMILRVQMQLES 247
P ++ + + EV++ G WA L Q++L++
Sbjct: 116 PDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKT 156
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.138 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117,681,549
Number of Sequences: 539616
Number of extensions: 4671224
Number of successful extensions: 15135
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 15122
Number of HSP's gapped (non-prelim): 44
length of query: 332
length of database: 191,569,459
effective HSP length: 118
effective length of query: 214
effective length of database: 127,894,771
effective search space: 27369480994
effective search space used: 27369480994
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)