Query 019995
Match_columns 332
No_of_seqs 115 out of 1303
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 06:11:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019995.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019995hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00411 nodulin MtN21 family 100.0 2.2E-36 4.7E-41 290.0 26.7 306 9-314 10-329 (358)
2 PRK11272 putative DMT superfam 100.0 3.8E-30 8.3E-35 241.0 24.9 269 13-316 9-288 (292)
3 PRK11689 aromatic amino acid e 100.0 1.3E-29 2.8E-34 237.9 23.3 273 10-313 2-287 (295)
4 PRK11453 O-acetylserine/cystei 100.0 6.1E-29 1.3E-33 233.7 25.0 266 13-312 5-286 (299)
5 TIGR00950 2A78 Carboxylate/Ami 100.0 2.4E-27 5.1E-32 217.5 24.4 240 24-300 1-248 (260)
6 PRK10532 threonine and homoser 100.0 4.4E-27 9.6E-32 220.5 26.3 271 1-312 1-280 (293)
7 PRK15430 putative chlorampheni 100.0 1.4E-27 3E-32 224.2 22.9 259 4-302 2-271 (296)
8 TIGR00688 rarD rarD protein. T 99.9 4.7E-25 1E-29 202.6 22.4 243 12-291 2-255 (256)
9 TIGR00817 tpt Tpt phosphate/ph 99.9 1.3E-24 2.8E-29 204.4 22.3 263 27-319 17-299 (302)
10 PTZ00343 triose or hexose phos 99.9 1.8E-22 3.9E-27 193.8 24.7 262 25-315 62-350 (350)
11 TIGR03340 phn_DUF6 phosphonate 99.9 1.1E-22 2.4E-27 189.6 19.3 257 14-302 3-269 (281)
12 COG0697 RhaT Permeases of the 99.9 3.7E-20 8.1E-25 171.0 26.6 272 10-315 5-289 (292)
13 PF06027 DUF914: Eukaryotic pr 99.8 5E-17 1.1E-21 153.9 26.1 279 21-319 22-311 (334)
14 TIGR00776 RhaT RhaT L-rhamnose 99.8 7.7E-17 1.7E-21 151.0 22.0 259 14-303 3-271 (290)
15 COG5006 rhtA Threonine/homoser 99.7 5.1E-16 1.1E-20 138.2 20.3 262 13-313 13-282 (292)
16 COG2962 RarD Predicted permeas 99.7 1.9E-15 4.1E-20 137.7 22.0 257 10-302 5-269 (293)
17 KOG4510 Permease of the drug/m 99.6 1.9E-15 4.1E-20 135.5 4.3 267 10-299 36-308 (346)
18 PF00892 EamA: EamA-like trans 99.5 6.8E-14 1.5E-18 113.1 6.5 123 22-152 1-124 (126)
19 PF08449 UAA: UAA transporter 99.4 5.8E-11 1.2E-15 112.0 25.3 255 41-316 32-300 (303)
20 KOG2765 Predicted membrane pro 99.4 8E-12 1.7E-16 117.2 15.1 217 81-316 164-393 (416)
21 COG2510 Predicted membrane pro 99.4 3.7E-12 8E-17 102.5 10.5 134 13-153 4-138 (140)
22 TIGR00950 2A78 Carboxylate/Ami 99.2 3.5E-10 7.6E-15 103.6 14.6 132 9-149 125-259 (260)
23 PF13536 EmrE: Multidrug resis 99.1 1.1E-10 2.4E-15 94.1 4.9 102 45-153 1-105 (113)
24 PF04142 Nuc_sug_transp: Nucle 99.0 1.2E-07 2.6E-12 86.7 20.8 214 72-299 13-236 (244)
25 KOG1441 Glucose-6-phosphate/ph 99.0 8.4E-09 1.8E-13 97.0 13.0 258 29-317 34-311 (316)
26 PRK10532 threonine and homoser 98.9 3.6E-08 7.9E-13 92.5 13.2 133 11-153 147-280 (293)
27 PF00892 EamA: EamA-like trans 98.8 9.9E-09 2.1E-13 82.6 7.2 105 193-302 1-112 (126)
28 PRK11272 putative DMT superfam 98.8 5.2E-08 1.1E-12 91.3 12.3 135 11-153 149-284 (292)
29 COG2510 Predicted membrane pro 98.7 1.5E-07 3.2E-12 76.2 10.8 124 185-310 5-136 (140)
30 PRK11689 aromatic amino acid e 98.7 2E-07 4.3E-12 87.5 12.6 132 11-153 155-286 (295)
31 PLN00411 nodulin MtN21 family 98.6 3.2E-07 7E-12 88.5 12.7 135 13-155 190-329 (358)
32 KOG2234 Predicted UDP-galactos 98.6 3.2E-05 7E-10 73.0 25.4 268 12-298 15-304 (345)
33 TIGR03340 phn_DUF6 phosphonate 98.6 1.8E-07 3.9E-12 87.1 8.4 133 11-151 143-280 (281)
34 PRK11453 O-acetylserine/cystei 98.6 1.4E-06 3.1E-11 81.8 14.2 137 11-153 142-286 (299)
35 TIGR00817 tpt Tpt phosphate/ph 98.5 4.9E-07 1.1E-11 85.0 8.6 137 11-153 144-292 (302)
36 PF06800 Sugar_transport: Suga 98.4 1.4E-05 3.1E-10 73.6 16.1 213 74-309 43-260 (269)
37 KOG1444 Nucleotide-sugar trans 98.4 4.8E-05 1E-09 70.9 19.5 284 3-318 3-308 (314)
38 PF03151 TPT: Triose-phosphate 98.4 7.4E-06 1.6E-10 68.8 12.6 132 14-151 2-150 (153)
39 PTZ00343 triose or hexose phos 98.3 1.1E-05 2.4E-10 77.7 13.4 135 11-151 193-345 (350)
40 KOG2766 Predicted membrane pro 98.2 5.2E-06 1.1E-10 74.9 8.4 171 40-236 47-217 (336)
41 COG0697 RhaT Permeases of the 98.2 2.3E-05 5E-10 72.0 13.0 132 11-153 153-286 (292)
42 TIGR00776 RhaT RhaT L-rhamnose 98.2 1.2E-05 2.7E-10 75.4 11.3 132 11-153 151-287 (290)
43 KOG1443 Predicted integral mem 98.2 0.00018 4E-09 66.6 18.0 259 24-310 29-312 (349)
44 PRK15430 putative chlorampheni 98.2 1.5E-05 3.2E-10 74.9 11.2 129 16-153 153-284 (296)
45 PRK15051 4-amino-4-deoxy-L-ara 98.1 4.3E-06 9.4E-11 67.2 5.8 68 80-153 40-108 (111)
46 PF03151 TPT: Triose-phosphate 98.0 0.00012 2.7E-09 61.3 12.0 118 184-301 1-138 (153)
47 KOG4314 Predicted carbohydrate 98.0 3.9E-05 8.4E-10 66.9 8.5 103 81-208 58-160 (290)
48 TIGR00688 rarD rarD protein. T 97.9 9.5E-05 2.1E-09 67.7 10.9 126 184-311 3-140 (256)
49 KOG3912 Predicted integral mem 97.9 0.00032 6.8E-09 64.4 13.4 134 81-231 91-225 (372)
50 KOG1581 UDP-galactose transpor 97.8 0.0067 1.4E-07 56.4 20.6 239 40-302 50-299 (327)
51 PRK13499 rhamnose-proton sympo 97.8 0.0034 7.4E-08 60.1 19.0 273 10-299 5-318 (345)
52 PRK02971 4-amino-4-deoxy-L-ara 97.6 0.00058 1.3E-08 56.3 9.8 116 13-153 3-121 (129)
53 PF05653 Mg_trans_NIPA: Magnes 97.5 0.0039 8.4E-08 58.8 15.7 68 82-155 55-123 (300)
54 COG5006 rhtA Threonine/homoser 97.4 0.0014 3.1E-08 59.3 10.3 130 11-149 147-277 (292)
55 KOG1580 UDP-galactose transpor 97.4 0.0014 3.1E-08 58.7 9.9 203 79-302 88-299 (337)
56 PF06027 DUF914: Eukaryotic pr 97.3 0.0027 5.9E-08 60.6 11.7 140 8-154 164-305 (334)
57 KOG1442 GDP-fucose transporter 97.2 0.0062 1.4E-07 55.9 11.9 230 40-298 60-309 (347)
58 PF06800 Sugar_transport: Suga 96.9 0.0072 1.6E-07 55.9 10.2 132 10-150 136-267 (269)
59 PRK02971 4-amino-4-deoxy-L-ara 96.9 0.0019 4.1E-08 53.3 5.3 118 184-319 3-128 (129)
60 PF10639 UPF0546: Uncharacteri 96.7 0.0049 1.1E-07 49.5 6.1 110 18-152 2-112 (113)
61 PF08449 UAA: UAA transporter 96.6 0.032 7E-07 52.5 12.5 133 13-151 155-294 (303)
62 KOG2922 Uncharacterized conser 96.6 0.11 2.5E-06 48.8 15.2 115 11-154 20-136 (335)
63 KOG4510 Permease of the drug/m 96.6 0.0028 6E-08 58.0 4.3 127 11-145 190-316 (346)
64 TIGR00803 nst UDP-galactose tr 96.5 0.022 4.7E-07 51.0 10.1 121 180-302 82-210 (222)
65 PF13536 EmrE: Multidrug resis 96.4 0.0073 1.6E-07 48.3 5.8 57 257-313 45-106 (113)
66 PRK10650 multidrug efflux syst 96.3 0.026 5.6E-07 45.1 7.9 60 87-152 46-106 (109)
67 COG4975 GlcU Putative glucose 96.1 0.00028 6.1E-09 63.6 -4.4 268 13-309 3-274 (288)
68 COG5070 VRG4 Nucleotide-sugar 96.0 0.059 1.3E-06 48.2 9.6 231 42-298 38-278 (309)
69 PRK09541 emrE multidrug efflux 96.0 0.028 6E-07 45.0 7.0 60 257-316 40-106 (110)
70 PRK15051 4-amino-4-deoxy-L-ara 95.9 0.027 5.9E-07 45.1 6.5 54 257-310 47-106 (111)
71 COG2962 RarD Predicted permeas 95.7 0.19 4.1E-06 46.7 12.1 122 21-151 157-280 (293)
72 PRK10452 multidrug efflux syst 95.7 0.016 3.4E-07 47.2 4.2 65 83-153 36-102 (120)
73 COG2076 EmrE Membrane transpor 95.6 0.014 3.1E-07 46.1 3.8 63 84-152 37-101 (106)
74 COG2076 EmrE Membrane transpor 95.6 0.04 8.6E-07 43.7 6.3 60 257-316 40-106 (106)
75 KOG1582 UDP-galactose transpor 95.5 0.11 2.4E-06 47.8 9.5 270 19-320 53-338 (367)
76 PRK10452 multidrug efflux syst 95.5 0.065 1.4E-06 43.6 7.3 60 257-316 40-106 (120)
77 PRK11431 multidrug efflux syst 95.4 0.083 1.8E-06 41.9 7.5 60 257-316 39-105 (105)
78 PF00893 Multi_Drug_Res: Small 95.4 0.044 9.5E-07 42.4 5.8 56 83-144 35-92 (93)
79 PRK11431 multidrug efflux syst 95.4 0.03 6.4E-07 44.5 4.9 63 84-152 36-100 (105)
80 PRK09541 emrE multidrug efflux 95.4 0.026 5.7E-07 45.2 4.6 66 82-153 35-102 (110)
81 PRK13499 rhamnose-proton sympo 95.3 0.31 6.8E-06 46.8 12.5 143 10-153 172-340 (345)
82 PRK10650 multidrug efflux syst 95.3 0.13 2.7E-06 41.2 8.2 57 257-313 45-108 (109)
83 KOG1441 Glucose-6-phosphate/ph 95.1 0.028 6.1E-07 53.3 4.5 135 10-151 161-304 (316)
84 KOG1583 UDP-N-acetylglucosamin 94.4 0.4 8.8E-06 44.3 10.0 256 26-302 17-300 (330)
85 PF04657 DUF606: Protein of un 94.4 0.54 1.2E-05 39.1 10.1 106 40-150 29-137 (138)
86 KOG2765 Predicted membrane pro 93.3 0.32 6.9E-06 46.8 7.6 138 10-153 245-389 (416)
87 TIGR00803 nst UDP-galactose tr 92.2 0.86 1.9E-05 40.6 8.6 63 83-151 159-221 (222)
88 PF00893 Multi_Drug_Res: Small 90.9 1.4 3.1E-05 33.9 7.5 46 257-302 39-88 (93)
89 PF04657 DUF606: Protein of un 89.6 7.4 0.00016 32.3 11.2 102 185-290 3-111 (138)
90 KOG1580 UDP-galactose transpor 89.5 0.31 6.8E-06 44.1 3.0 71 75-151 240-310 (337)
91 COG3238 Uncharacterized protei 88.6 9.6 0.00021 32.2 11.1 54 183-236 5-58 (150)
92 PF05653 Mg_trans_NIPA: Magnes 85.6 3.5 7.6E-05 38.9 7.8 110 180-310 4-119 (300)
93 COG3238 Uncharacterized protei 85.4 11 0.00024 31.8 9.8 137 12-152 5-144 (150)
94 KOG1444 Nucleotide-sugar trans 83.8 6.8 0.00015 37.0 8.6 135 11-151 156-297 (314)
95 COG4975 GlcU Putative glucose 81.4 0.6 1.3E-05 42.5 0.7 107 38-153 178-284 (288)
96 KOG1581 UDP-galactose transpor 76.4 36 0.00077 32.2 10.6 132 13-151 173-310 (327)
97 COG5070 VRG4 Nucleotide-sugar 74.7 11 0.00023 34.2 6.5 104 39-148 183-290 (309)
98 KOG3912 Predicted integral mem 69.4 24 0.00052 33.1 7.7 136 10-151 174-331 (372)
99 PF07857 DUF1632: CEO family ( 69.0 74 0.0016 29.3 10.9 133 14-156 2-136 (254)
100 PF04142 Nuc_sug_transp: Nucle 63.0 1.2E+02 0.0026 27.6 13.2 121 11-131 113-236 (244)
101 COG4657 RnfA Predicted NADH:ub 62.7 9.6 0.00021 32.5 3.5 29 180-208 129-157 (193)
102 KOG4831 Unnamed protein [Funct 48.5 71 0.0015 25.4 6.0 118 14-152 5-123 (125)
103 PF06379 RhaT: L-rhamnose-prot 40.9 1.2E+02 0.0026 29.2 7.5 112 181-294 5-124 (344)
104 KOG1582 UDP-galactose transpor 39.9 45 0.00097 31.2 4.3 108 39-153 218-331 (367)
105 PRK15462 dipeptide/tripeptide 33.9 1.9E+02 0.0041 29.3 8.2 48 105-152 310-360 (493)
106 KOG1443 Predicted integral mem 33.9 4.3E+02 0.0093 25.3 10.8 133 13-151 165-312 (349)
107 COG1968 BacA Undecaprenyl pyro 27.3 5.1E+02 0.011 24.1 11.4 113 13-126 86-210 (270)
108 KOG4314 Predicted carbohydrate 26.8 86 0.0019 27.9 3.7 55 259-313 65-125 (290)
109 PF06570 DUF1129: Protein of u 26.2 4.5E+02 0.0097 23.0 10.7 45 76-123 146-190 (206)
110 KOG2766 Predicted membrane pro 25.5 1.1E+02 0.0023 28.5 4.2 136 7-152 161-297 (336)
111 PF06379 RhaT: L-rhamnose-prot 25.0 6.3E+02 0.014 24.4 18.4 277 10-301 5-319 (344)
112 PF07444 Ycf66_N: Ycf66 protei 24.0 3.2E+02 0.007 20.7 7.9 56 38-101 4-60 (84)
113 CHL00196 psbY photosystem II p 23.4 1.8E+02 0.004 18.3 3.7 20 183-202 6-25 (36)
No 1
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=100.00 E-value=2.2e-36 Score=290.03 Aligned_cols=306 Identities=31% Similarity=0.493 Sum_probs=241.2
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHH
Q 019995 9 RAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSE-RPQLTFSILCSFFLLSVFGC 87 (332)
Q Consensus 9 ~~~~~~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~-~~~~~~~~~~~~~~~gl~g~ 87 (332)
++.+++..++.+++.+++..++.|.+++.+++|..++++|+.+|+++++++.+.++|++ +++.+++++..+.+.|++++
T Consensus 10 ~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~ 89 (358)
T PLN00411 10 REAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGS 89 (358)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHH
Confidence 36779999999999999999999999999999999999999999999999877654432 34456788888889999986
Q ss_pred HHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeeeecCCCCCcCCC--C
Q 019995 88 SSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGEL--S 165 (332)
Q Consensus 88 ~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~~~~~~~--~ 165 (332)
.++.+++.|++|+++++++++.+++|+++.+++++++.|+++.++|.++.|++|++++++|+.++..++++.....+ .
T Consensus 90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~ 169 (358)
T PLN00411 90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPP 169 (358)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccc
Confidence 67789999999999999999999999999999999987777777777888999999999999887654432110000 0
Q ss_pred CCCC-CCc-ccCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHcCC-CCCcc
Q 019995 166 HSGS-PRR-LLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSE-PSDWK 242 (332)
Q Consensus 166 ~~~~-~~~-~~~~~~~~~~~G~~l~L~aa~~~A~~~vl~~~~~~~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~-~~~~~ 242 (332)
+.|+ ..+ .+...+.+...|+++.++|+++||+|++++||..++++++...++|++.++++.+.+.+...+++ ...|.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~ 249 (358)
T PLN00411 170 YLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWI 249 (358)
T ss_pred cccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccce
Confidence 0000 000 00011123456999999999999999999999988887666788899998888887777665542 23332
Q ss_pred ccchhhHHHHHHHh--hHHHHHHHHHHhccc-h--hhhhhchHHHHHHHHHHHHhCCccccchhh---hhhheeeeeeec
Q 019995 243 LGLDIGLVAVLYSV--SSYWHWVSSWLVHMV-P--VENWTSLCINVQALGHCLLYCHGCRHCRRR---FLSWKVLLINFF 314 (332)
Q Consensus 243 ~~~~~~~~~l~~~g--t~i~~~l~~~~l~~~-~--~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~---~~~~~~~~~~~~ 314 (332)
..++.....++|.| +.++|.+|+|++++. | ++.+.+++|++++++|++++||++++.+-. .+..||.+.+..
T Consensus 250 ~~~~~~~~~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~ 329 (358)
T PLN00411 250 IHFDITLITIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWG 329 (358)
T ss_pred eccchHHHHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhh
Confidence 22222344566766 778999999999999 7 999999999999999999999999987665 688888877643
No 2
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.97 E-value=3.8e-30 Score=241.04 Aligned_cols=269 Identities=11% Similarity=0.033 Sum_probs=213.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH-HHHHH
Q 019995 13 PSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CSSQI 91 (332)
Q Consensus 13 ~~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g-~~~~~ 91 (332)
-.+.+++..++||++++++|.+.+ ++||..++++|+.+++++++++...+ | ++ ..+++++......|.++ ..++.
T Consensus 9 ~~~~~~~~~~iWg~~~~~~K~~~~-~~~p~~~~~~R~~~a~l~ll~~~~~~-~-~~-~~~~~~~~~~~~~g~~~~~~~~~ 84 (292)
T PRK11272 9 LFGALFALYIIWGSTYLVIRIGVE-SWPPLMMAGVRFLIAGILLLAFLLLR-G-HP-LPTLRQWLNAALIGLLLLAVGNG 84 (292)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhc-cCCHHHHHHHHHHHHHHHHHHHHHHh-C-CC-CCcHHHHHHHHHHHHHHHHHHHH
Confidence 345777899999999999999887 59999999999999999998876542 2 22 23467788888899888 77888
Q ss_pred HHHHhh-cccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeeeecCCCCCcCCCCCCCCC
Q 019995 92 FSFVGI-QYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSP 170 (332)
Q Consensus 92 ~~~~gl-~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~~~~~~~~~~~~~ 170 (332)
+++.+. ++++++.++++.+++|+++.+++++ +|||++++ +++|++++++|+.++... + +
T Consensus 85 ~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~------~~~~~~la~~Gv~ll~~~-~-~----------- 144 (292)
T PRK11272 85 MVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKL------EWLGIAIGLAGIVLLNSG-G-N----------- 144 (292)
T ss_pred HHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchh------HHHHHHHHHHhHHHHhcC-c-c-----------
Confidence 999999 9999999999999999999999986 69998876 499999999999876421 0 0
Q ss_pred CcccCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHcCCCCCccccchhhHH
Q 019995 171 RRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLV 250 (332)
Q Consensus 171 ~~~~~~~~~~~~~G~~l~L~aa~~~A~~~vl~~~~~~~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
.+ ....|+++.++|+++||.|.+..||..++ ++...+.+++..+++.+.+.....+.+.... .+...|.
T Consensus 145 ------~~-~~~~G~l~~l~a~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 213 (292)
T PRK11272 145 ------LS-GNPWGAILILIASASWAFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGERLTAL--PTLSGFL 213 (292)
T ss_pred ------cc-cchHHHHHHHHHHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCccccc--CCHHHHH
Confidence 11 12469999999999999999998886433 3455678999899888877765433322111 1123456
Q ss_pred HHHHHh---hHHHHHHHHHHhccc-h--hhhhhchHHHHHHHHHHHHhCCccccchhh---hhhheeeeeeeccC
Q 019995 251 AVLYSV---SSYWHWVSSWLVHMV-P--VENWTSLCINVQALGHCLLYCHGCRHCRRR---FLSWKVLLINFFSN 316 (332)
Q Consensus 251 ~l~~~g---t~i~~~l~~~~l~~~-~--~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~---~~~~~~~~~~~~~~ 316 (332)
.++|.| |+++|.+|++++++. + ++.+.+++|++++++|++++||+++..+-. .+..++++.+..++
T Consensus 214 ~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~ 288 (292)
T PRK11272 214 ALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 666666 899999999999999 6 999999999999999999999999986644 57778877665444
No 3
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.97 E-value=1.3e-29 Score=237.88 Aligned_cols=273 Identities=14% Similarity=0.071 Sum_probs=197.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH-HH
Q 019995 10 AALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CS 88 (332)
Q Consensus 10 ~~~~~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g-~~ 88 (332)
|.++++.+++++++||++++.+|.+.++ +||..++++|+.+++++++++. .+++ .++.+ ++....+.++ ..
T Consensus 2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~~~-~~P~~~~~~R~~~a~l~l~~~~--~~~~-~~~~~----~~~~~~~~l~~~~ 73 (295)
T PRK11689 2 SQKATLIGLIAILLWSTMVGLIRGVSES-LGPVGGAAMIYSVSGLLLLLTV--GFPR-LRQFP----KRYLLAGGLLFVS 73 (295)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHcc-CChHHHHHHHHHHHHHHHHHHc--cccc-ccccc----HHHHHHHhHHHHH
Confidence 4567888999999999999999999875 9999999999999999988652 1111 11111 2233445555 77
Q ss_pred HHHHHHHhhcc----cChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeeeecCCCCCcCCC
Q 019995 89 SQIFSFVGIQY----SSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGEL 164 (332)
Q Consensus 89 ~~~~~~~gl~~----t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~~~~~~~ 164 (332)
++.+++.|++| +++++++++.+++|+++.+++++++|||++++ |++|++++++|++++... +...+.
T Consensus 74 ~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~------~~~g~~l~~~Gv~li~~~-~~~~~~-- 144 (295)
T PRK11689 74 YEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWL------LIPGLLLALAGVAWVLGG-DNGLSL-- 144 (295)
T ss_pred HHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHH------HHHHHHHHHHhHhheecC-Cccchh--
Confidence 77788888764 57888999999999999999999999998876 499999999999887622 110000
Q ss_pred CCCCCCCcccCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccc
Q 019995 165 SHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLG 244 (332)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~G~~l~L~aa~~~A~~~vl~~~~~~~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~~~~~ 244 (332)
++......+...|+++.++|++|||.|+++.||..++. ++... .+ ..+++.+.+.....+.+...++
T Consensus 145 -------~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~-~~~~~--~~-~~~~~~l~~~~~~~~~~~~~~~-- 211 (295)
T PRK11689 145 -------AELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK-NGITL--FF-ILTALALWIKYFLSPQPAMVFS-- 211 (295)
T ss_pred -------hhhhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCC-CchhH--HH-HHHHHHHHHHHHHhcCccccCC--
Confidence 00000001224699999999999999999999987665 45543 22 3334444443333222111122
Q ss_pred chhhHHHHHHHh--hHHHHHHHHHHhccc-h--hhhhhchHHHHHHHHHHHHhCCccccchhh---hhhheeeeeee
Q 019995 245 LDIGLVAVLYSV--SSYWHWVSSWLVHMV-P--VENWTSLCINVQALGHCLLYCHGCRHCRRR---FLSWKVLLINF 313 (332)
Q Consensus 245 ~~~~~~~l~~~g--t~i~~~l~~~~l~~~-~--~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~---~~~~~~~~~~~ 313 (332)
+ ..|..+++.| ++++|.+|++++++. | ++.+.+++|++++++|++++||+++..+-. .+..++++...
T Consensus 212 ~-~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 212 L-PAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL 287 (295)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence 2 3466666766 999999999999999 6 999999999999999999999999986655 56677765543
No 4
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.97 E-value=6.1e-29 Score=233.69 Aligned_cols=266 Identities=16% Similarity=0.093 Sum_probs=199.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH-HHHHH
Q 019995 13 PSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CSSQI 91 (332)
Q Consensus 13 ~~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g-~~~~~ 91 (332)
..+..++++++||++++++|.++++ +||.+++++|+.++++.++++. +++ +.++ ......|+.. ...+.
T Consensus 5 ~~l~~l~~~~~Wg~~~~~~k~~~~~-~~p~~~~~~R~~~a~~~l~~~~--~~~----~~~~---~~~~~~g~~~~~~~~~ 74 (299)
T PRK11453 5 DGVLALLVVVVWGLNFVVIKVGLHN-MPPLMLAGLRFMLVAFPAIFFV--ARP----KVPL---NLLLGYGLTISFGQFA 74 (299)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHh--cCC----CCch---HHHHHHHHHHHHHHHH
Confidence 3466888999999999999999875 9999999999999887766543 111 1122 2344556665 56667
Q ss_pred HHHHhhcc-cChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeeeecCCCCCcCCCCCCCCC
Q 019995 92 FSFVGIQY-SSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSP 170 (332)
Q Consensus 92 ~~~~gl~~-t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~~~~~~~~~~~~~ 170 (332)
+++.+++| .++++++++.+++|+++.+++++++|||+++++ ++|++++++|+.++... +.
T Consensus 75 ~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~------~~~~~l~~~Gv~ll~~~-~~------------ 135 (299)
T PRK11453 75 FLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQ------LAGIALAIFGVLVLIED-SL------------ 135 (299)
T ss_pred HHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHH------HHHHHHHHHhHHHhccc-cC------------
Confidence 88889998 588999999999999999999999999998764 99999999999887521 10
Q ss_pred CcccCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcch--hHHHHHHHHHHHHHHHHHHHHHHcCCCC---Cccccc
Q 019995 171 RRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAA--VLIIMFYLFFFNTILSTAFALIVVSEPS---DWKLGL 245 (332)
Q Consensus 171 ~~~~~~~~~~~~~G~~l~L~aa~~~A~~~vl~~~~~~~~~~--~~~~~~~~~~~g~i~l~~~~~~~~~~~~---~~~~~~ 245 (332)
........|+++.++|+++||.|++++||..++.++ ......+++..+.+.....+...+++.. .+...+
T Consensus 136 -----~~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (299)
T PRK11453 136 -----NGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTID 210 (299)
T ss_pred -----CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCC
Confidence 011112469999999999999999999997655432 3445667777776665555544443211 111112
Q ss_pred hhhHHHHHHHh---hHHHHHHHHHHhccc-h--hhhhhchHHHHHHHHHHHHhCCccccchhh---hhhheeeeee
Q 019995 246 DIGLVAVLYSV---SSYWHWVSSWLVHMV-P--VENWTSLCINVQALGHCLLYCHGCRHCRRR---FLSWKVLLIN 312 (332)
Q Consensus 246 ~~~~~~l~~~g---t~i~~~l~~~~l~~~-~--~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~---~~~~~~~~~~ 312 (332)
...|..++|.| |+++|.+|++++++. + ++.+.+++|++++++|++++||+++..+-. .+..++.+.+
T Consensus 211 ~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~ 286 (299)
T PRK11453 211 MTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINV 286 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHh
Confidence 23577788887 999999999999999 6 999999999999999999999999986655 4666666443
No 5
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.96 E-value=2.4e-27 Score=217.50 Aligned_cols=240 Identities=15% Similarity=0.116 Sum_probs=195.1
Q ss_pred HHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHhhcccCh
Q 019995 24 QVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CSSQIFSFVGIQYSSP 102 (332)
Q Consensus 24 wg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g-~~~~~~~~~gl~~t~a 102 (332)
||.+++.+|.+++++.|+...++.|++.+.+++.++... + .+++++.+....|.++ .+++.+++.|++|+++
T Consensus 1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~--~-----~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~ 73 (260)
T TIGR00950 1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRR--R-----PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV 73 (260)
T ss_pred CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHh--c-----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 899999999999877899999999999998888776432 2 2345667788888888 8999999999999999
Q ss_pred hhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeeeecCCCCCcCCCCCCCCCCcccCCCCccch
Q 019995 103 TLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWI 182 (332)
Q Consensus 103 ~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (332)
++++++.+++|+++.+++.+++|||++++ +++|++++++|+.++. .++ + .....
T Consensus 74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~------~~~gi~i~~~Gv~li~-~~~-~------------------~~~~~ 127 (260)
T TIGR00950 74 GEAALLLYLAPLYVTLLSDLMGKERPRKL------VLLAAVLGLAGAVLLL-SDG-N------------------LSINP 127 (260)
T ss_pred hhhHHHHhhhHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHhhc-cCC-c------------------ccccH
Confidence 99999999999999999999999999876 4999999999998865 211 0 11235
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhHHHHHHHHHHHHHHHHHHHHHHcCCCCCccccchhhHHHHHHHh---hH
Q 019995 183 LGGFFLAAEAFMNSAWFILQALILRKFA-AVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSV---SS 258 (332)
Q Consensus 183 ~G~~l~L~aa~~~A~~~vl~~~~~~~~~-~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~g---t~ 258 (332)
.|+.+.++++++|+.+.+..||..++.+ ++...+.+++.++.+.+.+.....+++. .+ +...+..+++.+ +.
T Consensus 128 ~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~ 203 (260)
T TIGR00950 128 AGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QA---LSLQWGALLYLGLIGTA 203 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-Cc---chHHHHHHHHHHHHHHH
Confidence 7999999999999999999999877653 2345555788899888888765533222 22 123455555565 88
Q ss_pred HHHHHHHHHhccc-h--hhhhhchHHHHHHHHHHHHhCCccccch
Q 019995 259 YWHWVSSWLVHMV-P--VENWTSLCINVQALGHCLLYCHGCRHCR 300 (332)
Q Consensus 259 i~~~l~~~~l~~~-~--~s~~~~l~Pv~a~il~~~~LgE~~~~~~ 300 (332)
++|.+|++++++. + ++.+.+++|+++++++++++||+++..+
T Consensus 204 ~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~ 248 (260)
T TIGR00950 204 LAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQ 248 (260)
T ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHH
Confidence 9999999999999 5 9999999999999999999999999654
No 6
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.96 E-value=4.4e-27 Score=220.47 Aligned_cols=271 Identities=8% Similarity=-0.003 Sum_probs=208.1
Q ss_pred CCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHH
Q 019995 1 MGVDMGSMRAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFF 80 (332)
Q Consensus 1 ~~~~~~~~~~~~~~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~ 80 (332)
|-++..+..+.+++..++++++.|+.+..++|.+.++ .||..++++|+.+++++++++... ++ .+.++++++...
T Consensus 1 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~~~--~~--~~~~~~~~~~~~ 75 (293)
T PRK10532 1 MPGSLRKLPVWLPILLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIFKP--WR--LRFAKEQRLPLL 75 (293)
T ss_pred CCCcccccccchHHHHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHhH--Hh--ccCCHHHHHHHH
Confidence 3445555667889999999999999999999999986 999999999999999998876422 21 134567787888
Q ss_pred HHHHHHHHHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeeeecCCCCC
Q 019995 81 LLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPL 160 (332)
Q Consensus 81 ~~gl~g~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~~~ 160 (332)
..|++....+.+++++++|++++.++++.+++|+++.+++. |+.. +..++.++++|+.++. ..+.+
T Consensus 76 ~~g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~--------~~~~~~i~~~Gv~li~-~~~~~- 141 (293)
T PRK10532 76 FYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPV--------DFVWVVLAVLGLWFLL-PLGQD- 141 (293)
T ss_pred HHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChH--------HHHHHHHHHHHHheee-ecCCC-
Confidence 88887777788899999999999999999999999987762 3321 3566788899998765 21111
Q ss_pred cCCCCCCCCCCcccCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHcCCCCC
Q 019995 161 IGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSD 240 (332)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~G~~l~L~aa~~~A~~~vl~~~~~~~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~ 240 (332)
.+.....|+++.++|+++||.|.+..||..++.+ +... .++..++++.+.+.....+. ...
T Consensus 142 ----------------~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~-~~~~-~~~~~~~~~~l~~~~~~~~~-~~~ 202 (293)
T PRK10532 142 ----------------VSHVDLTGAALALGAGACWAIYILSGQRAGAEHG-PATV-AIGSLIAALIFVPIGALQAG-EAL 202 (293)
T ss_pred ----------------cccCChHHHHHHHHHHHHHHHHHHHHHHHhccCC-chHH-HHHHHHHHHHHHHHHHHccC-ccc
Confidence 1112246999999999999999999999877764 6665 46667777777776654322 111
Q ss_pred ccccchhhHHHHHHHh---hHHHHHHHHHHhccc-h--hhhhhchHHHHHHHHHHHHhCCccccchhh---hhhheeeee
Q 019995 241 WKLGLDIGLVAVLYSV---SSYWHWVSSWLVHMV-P--VENWTSLCINVQALGHCLLYCHGCRHCRRR---FLSWKVLLI 311 (332)
Q Consensus 241 ~~~~~~~~~~~l~~~g---t~i~~~l~~~~l~~~-~--~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~---~~~~~~~~~ 311 (332)
++ + ..+..++|.| |.++|.+|+++++|. + ++.+.++||++++++|++++||+++..+-. .++.++++.
T Consensus 203 ~~--~-~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~ 279 (293)
T PRK10532 203 WH--W-SILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGS 279 (293)
T ss_pred CC--H-HHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHH
Confidence 21 1 2344445666 999999999999999 6 999999999999999999999999987766 466676665
Q ss_pred e
Q 019995 312 N 312 (332)
Q Consensus 312 ~ 312 (332)
.
T Consensus 280 ~ 280 (293)
T PRK10532 280 T 280 (293)
T ss_pred H
Confidence 4
No 7
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.96 E-value=1.4e-27 Score=224.18 Aligned_cols=259 Identities=12% Similarity=0.013 Sum_probs=188.5
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCC--CCC-CHHHHHHHH
Q 019995 4 DMGSMRAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSER--PQL-TFSILCSFF 80 (332)
Q Consensus 4 ~~~~~~~~~~~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~--~~~-~~~~~~~~~ 80 (332)
||+ ++.++++.+++++++||.+++++|.. + ++||.++.++|++++.++++++...++++.+ ++. +++++.. .
T Consensus 2 ~~~--~~~~g~~~~l~a~~~wg~~~~~~k~~-~-~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~ 76 (296)
T PRK15430 2 DAK--QTRQGVLLALAAYFIWGIAPAYFKLI-Y-YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFM-L 76 (296)
T ss_pred Cch--hhhhHHHHHHHHHHHHHHHHHHHHHh-c-CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHH-H
Confidence 455 46789999999999999999999975 4 5999999999999999988776544321111 011 2343333 3
Q ss_pred HHHHHH-HHHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeeeecCCCC
Q 019995 81 LLSVFG-CSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPP 159 (332)
Q Consensus 81 ~~gl~g-~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~~ 159 (332)
..+.++ ..++.++++|++++++++++++.+++|+++.+++++++|||+++++ ++|++++++|+.++....
T Consensus 77 ~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~------~~g~~l~~~Gv~li~~~~--- 147 (296)
T PRK15430 77 AVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQ------WLAVILAICGVLVQLWTF--- 147 (296)
T ss_pred HHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHH------HHHHHHHHHHHHHHHHHc---
Confidence 356565 8899999999999999999999999999999999999999998764 999999999998764110
Q ss_pred CcCCCCCCCCCCcccCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhc-chhHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 019995 160 LIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKF-AAVLIIMFYLFFFNTILSTAFALIVVSEP 238 (332)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~G~~l~L~aa~~~A~~~vl~~~~~~~~-~~~~~~~~~~~~~g~i~l~~~~~~~~~~~ 238 (332)
+.. ..+.++++++||.|++..||..++. .+....+.|++..+.....+.. +.+.
T Consensus 148 ------------------~~~----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 202 (296)
T PRK15430 148 ------------------GSL----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIA---DSST 202 (296)
T ss_pred ------------------CCc----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHc---cCCc
Confidence 111 1467889999999999988864321 1234445566655554432211 1111
Q ss_pred CCccccchhhHHH-HHHHh--hHHHHHHHHHHhccc-h--hhhhhchHHHHHHHHHHHHhCCccccchhh
Q 019995 239 SDWKLGLDIGLVA-VLYSV--SSYWHWVSSWLVHMV-P--VENWTSLCINVQALGHCLLYCHGCRHCRRR 302 (332)
Q Consensus 239 ~~~~~~~~~~~~~-l~~~g--t~i~~~l~~~~l~~~-~--~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~ 302 (332)
..++. +...+.. +.+.| +.++|.+|++++++. | ++.+.+++|++++++|++++||+++..+-.
T Consensus 203 ~~~~~-~~~~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~ 271 (296)
T PRK15430 203 SHMGQ-NPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMV 271 (296)
T ss_pred ccccC-CcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHH
Confidence 11111 1111222 22334 889999999999999 6 999999999999999999999999986554
No 8
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.94 E-value=4.7e-25 Score=202.58 Aligned_cols=243 Identities=9% Similarity=-0.029 Sum_probs=173.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCC----C-CCCCHHH-HHHHHHHHHH
Q 019995 12 LPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSE----R-PQLTFSI-LCSFFLLSVF 85 (332)
Q Consensus 12 ~~~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~----~-~~~~~~~-~~~~~~~gl~ 85 (332)
|++..+++++++||.+++++|. .+ ++||.+++++|+++++++++++...+++++ + ++.++++ +..+...|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~-~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LK-PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hc-cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 5788999999999999999998 45 499999999999999988877654432211 0 1112222 3445667777
Q ss_pred HHHHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeeeecCCCCCcCCCC
Q 019995 86 GCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELS 165 (332)
Q Consensus 86 g~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~~~~~~~~ 165 (332)
...++.++++|++++++++++++.+++|+++++++++++|||+++++ ++|++++++|+.++...+
T Consensus 80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~------~l~~~~~~~Gv~li~~~~--------- 144 (256)
T TIGR00688 80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQ------FIAVIIATLGVISNIVLK--------- 144 (256)
T ss_pred HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHc---------
Confidence 78899999999999999999999999999999999999999998764 999999999998764110
Q ss_pred CCCCCCcccCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHcCCCCCccccc
Q 019995 166 HSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGL 245 (332)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~G~~l~L~aa~~~A~~~vl~~~~~~~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~~~~~~ 245 (332)
+.. ..+.+++++|||.|.+..||..++ + .......+ ........+... ...........+
T Consensus 145 ------------~~~----~~~~l~aa~~~a~~~i~~~~~~~~-~-~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~ 204 (256)
T TIGR00688 145 ------------GSL----PWEALVLAFSFTAYGLIRKALKNT-D-LAGFCLET-LSLMPVAIYYLL-QTDFATVQQTNP 204 (256)
T ss_pred ------------CCc----hHHHHHHHHHHHHHHHHHhhcCCC-C-cchHHHHH-HHHHHHHHHHHH-HhccCcccccCc
Confidence 101 135788999999999998876432 2 22221111 111111111111 111111001111
Q ss_pred hhhHHHHHHHh--hHHHHHHHHHHhccc-h--hhhhhchHHHHHHHHHHHH
Q 019995 246 DIGLVAVLYSV--SSYWHWVSSWLVHMV-P--VENWTSLCINVQALGHCLL 291 (332)
Q Consensus 246 ~~~~~~l~~~g--t~i~~~l~~~~l~~~-~--~s~~~~l~Pv~a~il~~~~ 291 (332)
...|..+++.| |.++|.+|++++++. + ++.+.+++|++++++|+++
T Consensus 205 ~~~~~~l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 205 FPIWLLLVLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 12455555666 999999999999999 5 9999999999999999864
No 9
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.93 E-value=1.3e-24 Score=204.40 Aligned_cols=263 Identities=13% Similarity=0.074 Sum_probs=199.8
Q ss_pred HHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccChhhHH
Q 019995 27 NMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLST 106 (332)
Q Consensus 27 ~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~~~~gl~~t~a~~as 106 (332)
..+.-|.++++--+|...+..|+.++.+.+.+... ...+++++.++++++.....|++++..+.+.++|++|++++.++
T Consensus 17 ~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~~ 95 (302)
T TIGR00817 17 FNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWS-SGLPKRLKISSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTH 95 (302)
T ss_pred HHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 33567999975467999999999999877655421 11223446678899999999999988889999999999999999
Q ss_pred HhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeeeecCCCCCcCCCCCCCCCCcccCCCCccchhHHH
Q 019995 107 AMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGF 186 (332)
Q Consensus 107 ii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 186 (332)
++.+++|+++++++++++|||++++ +++|++++++|+.+.. +.+ .+ ....|++
T Consensus 96 li~~~~Pv~~~ll~~~~~~e~~~~~------~~~~l~l~~~Gv~l~~---~~~-----------------~~-~~~~G~~ 148 (302)
T TIGR00817 96 TIKAMEPFFSVVLSAFFLGQEFPST------LWLSLLPIVGGVALAS---DTE-----------------LS-FNWAGFL 148 (302)
T ss_pred HHHhcchHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHhhhc---CCc-----------------cc-ccHHHHH
Confidence 9999999999999999999999876 4999999999997643 111 11 1246999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH--hcchhHHHHHHHHHHHHHHHHHHHHHHcCCCC---Ccc-----ccchhhHHHHHHHh
Q 019995 187 FLAAEAFMNSAWFILQALILR--KFAAVLIIMFYLFFFNTILSTAFALIVVSEPS---DWK-----LGLDIGLVAVLYSV 256 (332)
Q Consensus 187 l~L~aa~~~A~~~vl~~~~~~--~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~---~~~-----~~~~~~~~~l~~~g 256 (332)
+.++|+++||.|.++.||..+ +. |+...+.|++..+++.++|.....|+... .+. ......+...++.
T Consensus 149 ~~l~a~~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 226 (302)
T TIGR00817 149 SAMISNITFVSRNIFSKKAMTIKSL-DKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVA- 226 (302)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCC-CcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHH-
Confidence 999999999999999999877 66 58899999999999999998766553211 110 0000111111122
Q ss_pred hHHHH----HHHHHHhccc-h--hhhhhchHHHHHHHHHHHHhCCccccchhh---hhhheeeeeeeccCCcc
Q 019995 257 SSYWH----WVSSWLVHMV-P--VENWTSLCINVQALGHCLLYCHGCRHCRRR---FLSWKVLLINFFSNDFR 319 (332)
Q Consensus 257 t~i~~----~l~~~~l~~~-~--~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~---~~~~~~~~~~~~~~~~~ 319 (332)
+..++ .++++++++. | .+++.+++|++++++|++++||+++..+-. .+..|+.+-+..|+|-+
T Consensus 227 ~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~~ 299 (302)
T TIGR00817 227 AMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKP 299 (302)
T ss_pred HHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccCc
Confidence 22233 3455789999 6 899999999999999999999999987665 57888887776666543
No 10
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.91 E-value=1.8e-22 Score=193.83 Aligned_cols=262 Identities=14% Similarity=0.139 Sum_probs=197.5
Q ss_pred HHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 019995 25 VSNMEVIKAAMSKGIN-KYVIIVYSDALSSLFFLFCSFLFHRSERPQL--TFSILCSFFLLSVFGCSSQIFSFVGIQYSS 101 (332)
Q Consensus 25 g~~~v~~K~~~~~~~~-p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~--~~~~~~~~~~~gl~g~~~~~~~~~gl~~t~ 101 (332)
.......|.+++. +| |..++.+|++++.++...+.... .+++++. .+++++.++.+|+++...+...+.|+++++
T Consensus 62 ~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~llp~gl~~~~~~~~~~~sl~~~s 139 (350)
T PTZ00343 62 VLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWATG-FRKIPRIKSLKLFLKNFLPQGLCHLFVHFGAVISMGLGA 139 (350)
T ss_pred HHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 3445668999886 99 99999999999988765543222 2222334 245778899999999545666779999999
Q ss_pred hhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeeeecCCCCCcCCCCCCCCCCcccCCCCccc
Q 019995 102 PTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSW 181 (332)
Q Consensus 102 a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 181 (332)
++.++++.++.|+++++++++++|||++++ +++|+++.++|+.+.+. .+ .+. .
T Consensus 140 vs~~~iika~~Pvft~lls~~~l~ek~s~~------~~l~l~l~v~Gv~l~~~---~~-----------------~~~-~ 192 (350)
T PTZ00343 140 VSFTHVVKAAEPVFTALLSILFLKQFLNLY------AYLSLIPIVGGVALASV---KE-----------------LHF-T 192 (350)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHheec---cc-----------------chh-H
Confidence 999999999999999999999999999876 59999999999988652 11 111 2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcc------hhHHHHHHHHHHHHHHHHHHHHHHcCCC--CCcc----ccchhhH
Q 019995 182 ILGGFFLAAEAFMNSAWFILQALILRKFA------AVLIIMFYLFFFNTILSTAFALIVVSEP--SDWK----LGLDIGL 249 (332)
Q Consensus 182 ~~G~~l~L~aa~~~A~~~vl~~~~~~~~~------~~~~~~~~~~~~g~i~l~~~~~~~~~~~--~~~~----~~~~~~~ 249 (332)
..|++++++|+++||.++++.||..++.+ ++.....++...|++.++|+....|.+. ..+. ......+
T Consensus 193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~ 272 (350)
T PTZ00343 193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTK 272 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccch
Confidence 56999999999999999999999876531 3555666668899999999877555321 1110 0001111
Q ss_pred HHHHHHh--hHHHHHHHHH----Hhccc-h--hhhhhchHHHHHHHHHHHHhCCccccchhh---hhhheeeeeeecc
Q 019995 250 VAVLYSV--SSYWHWVSSW----LVHMV-P--VENWTSLCINVQALGHCLLYCHGCRHCRRR---FLSWKVLLINFFS 315 (332)
Q Consensus 250 ~~l~~~g--t~i~~~l~~~----~l~~~-~--~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~---~~~~~~~~~~~~~ 315 (332)
..+++.. ++++|.+|+. ++++. | .++..+++|++++++|++++||+++..+-. .++.|+.+-|.+|
T Consensus 273 ~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~k 350 (350)
T PTZ00343 273 GIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLFK 350 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhcC
Confidence 2222222 8899999995 99999 7 899999999999999999999999987766 5888887776654
No 11
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.90 E-value=1.1e-22 Score=189.58 Aligned_cols=257 Identities=11% Similarity=-0.056 Sum_probs=178.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhh-cCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 019995 14 SVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFH-RSERPQLTFSILCSFFLLSVFGCSSQIF 92 (332)
Q Consensus 14 ~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~-~~~~~~~~~~~~~~~~~~gl~g~~~~~~ 92 (332)
.+..+.++++|+...+..|...++ -++ ...+++..+++.+.|+...+. ++.+++.+++.+......++.+..++.+
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~-~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADK-EPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLG 79 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCc-hhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHH
Confidence 456778999999999999965544 344 357788888888888765431 2222333333333444444444899999
Q ss_pred HHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeeeecCCCCCcCCCCCCCCCCc
Q 019995 93 SFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRR 172 (332)
Q Consensus 93 ~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~ 172 (332)
++.|+++++++.++.+.+++|+++.+++++++|||+++++ ++|+++++.|+.++... +.
T Consensus 80 ~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~------~~g~~~~~~Gv~ll~~~-~~-------------- 138 (281)
T TIGR03340 80 LAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLA------WLGILIITLGLLVLGLS-RF-------------- 138 (281)
T ss_pred HHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHH------HHHHHHHHHHHHHHhcc-cc--------------
Confidence 9999999999999999999999999999999999998764 99999999999876521 10
Q ss_pred ccCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcch---hHHHHHHHHHHHHHHHHHHHHHHcCCCCCccccchhhH
Q 019995 173 LLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAA---VLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGL 249 (332)
Q Consensus 173 ~~~~~~~~~~~G~~l~L~aa~~~A~~~vl~~~~~~~~~~---~~~~~~~~~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~ 249 (332)
.+ ....|+.+.++++++|+.|++..|+..++.++ ....+.+++..+++.+.+.....+... +.. ....+
T Consensus 139 ----~~-~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~ 210 (281)
T TIGR03340 139 ----AQ-HRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRS--MFP-YARQI 210 (281)
T ss_pred ----cc-cchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccc--hhh-hHHHH
Confidence 01 11357889999999999999988875444321 112233444333232222222112211 111 11233
Q ss_pred HHHHHHh---hHHHHHHHHHHhccc-h--hhhhhchHHHHHHHHHHHHhCCccccchhh
Q 019995 250 VAVLYSV---SSYWHWVSSWLVHMV-P--VENWTSLCINVQALGHCLLYCHGCRHCRRR 302 (332)
Q Consensus 250 ~~l~~~g---t~i~~~l~~~~l~~~-~--~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~ 302 (332)
..+++.+ ++++|.+|++++++. + ++.+.+++|++++++|++++||+++..+-.
T Consensus 211 ~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~i 269 (281)
T TIGR03340 211 LPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLM 269 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHH
Confidence 4444454 889999999999999 5 899999999999999999999999875544
No 12
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.88 E-value=3.7e-20 Score=170.95 Aligned_cols=272 Identities=16% Similarity=0.186 Sum_probs=196.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH-HH
Q 019995 10 AALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CS 88 (332)
Q Consensus 10 ~~~~~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g-~~ 88 (332)
........++..+.|+.+....|...++..++....+.|+..+.++..+.... ++..+++ ..+.++.....+.++ ..
T Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~ 82 (292)
T COG0697 5 LLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLL-EPRGLRP-ALRPWLLLLLLALLGLAL 82 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHh-hcccccc-cccchHHHHHHHHHHHHH
Confidence 44566777788899999999999987654677777777999999885544322 1111111 112234455666666 89
Q ss_pred HHHHHHHhhcccChhhHHHhhhhhHHHHHHHHH-HHHhhccccccccccchhhhhhheeccceeeeecCCCCCcCCCCCC
Q 019995 89 SQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAI-IFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHS 167 (332)
Q Consensus 89 ~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~-l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~~~~~~~~~~ 167 (332)
.+.+++.++++++++.++.+.+++|+++.+++. ++++||++++ +++|++++++|++++....+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~------~~~~~~~~~~Gv~lv~~~~~---------- 146 (292)
T COG0697 83 PFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLL------QILGILLALAGVLLILLGGG---------- 146 (292)
T ss_pred HHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHheecCCC----------
Confidence 999999999999999999999999999999997 6679999876 49999999999998762211
Q ss_pred CCCCcccCCCCcc-chhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHH-HHHHHHHHHHHHHHHHHcCCCCCccccc
Q 019995 168 GSPRRLLLSPQLS-WILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMF-YLFFFNTILSTAFALIVVSEPSDWKLGL 245 (332)
Q Consensus 168 ~~~~~~~~~~~~~-~~~G~~l~L~aa~~~A~~~vl~~~~~~~~~~~~~~~~-~~~~~g~i~l~~~~~~~~~~~~~~~~~~ 245 (332)
.+.. ...|+.+.+.++++||++.+..|+.. +. ++..... ++.. ...+........... .+. .
T Consensus 147 ---------~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~-~ 210 (292)
T COG0697 147 ---------GGGILSLLGLLLALAAALLWALYTALVKRLS-RL-GPVTLALLLQLL--LALLLLLLFFLSGFG--API-L 210 (292)
T ss_pred ---------cchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CC-ChHHHHHHHHHH--HHHHHHHHHHhcccc--ccC-C
Confidence 0111 36899999999999999999998876 44 3555555 5554 222222222222111 111 1
Q ss_pred hhhHHHHHHHh---hHHHHHHHHHHhccc-h--hhhhhchHHHHHHHHHHHHhCCccccchhh---hhhheeeeeeecc
Q 019995 246 DIGLVAVLYSV---SSYWHWVSSWLVHMV-P--VENWTSLCINVQALGHCLLYCHGCRHCRRR---FLSWKVLLINFFS 315 (332)
Q Consensus 246 ~~~~~~l~~~g---t~i~~~l~~~~l~~~-~--~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~---~~~~~~~~~~~~~ 315 (332)
...+..+.+.| +++++.+|++++++. + ++.+.+++|+++++++++++||+++..+-. .++.|+.+.|..+
T Consensus 211 ~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~~ 289 (292)
T COG0697 211 SRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLRA 289 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhccc
Confidence 12344445555 668999999999999 5 888889999999999999999999986665 5788888777663
No 13
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.79 E-value=5e-17 Score=153.89 Aligned_cols=279 Identities=14% Similarity=0.106 Sum_probs=190.1
Q ss_pred HHHHHHHHHHHHHHHhCC--CChHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q 019995 21 LLAQVSNMEVIKAAMSKG--INKYVIIVYSDALSSLFFLFCSFLFHRS-ERPQLTFSILCSFFLLSVFGCSSQIFSFVGI 97 (332)
Q Consensus 21 ~~iwg~~~v~~K~~~~~~--~~p~~~~~~R~~~a~l~ll~~~~~~~~~-~~~~~~~~~~~~~~~~gl~g~~~~~~~~~gl 97 (332)
+++-.++.+.+...-+.+ .|..+......+++.+ ..+....++++ +..+.-+++|.+.+++|++....+++...|+
T Consensus 22 sl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~v-y~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~ 100 (334)
T PF06027_consen 22 SLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALV-YTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAY 100 (334)
T ss_pred HHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHH-HhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHh
Confidence 334455566655544444 4555555554444443 33433332221 1222234567777888999999999999999
Q ss_pred cccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeeeecCCCCCcCCCCCCCCCCcccCCC
Q 019995 98 QYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSP 177 (332)
Q Consensus 98 ~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~ 177 (332)
+||+.+.+.++..++-+++.+++++++|||.++. |++|++++++|+.+++..+... . ++...
T Consensus 101 ~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~------~~~gv~i~i~Gv~lv~~sD~~~--~----------~~~~~ 162 (334)
T PF06027_consen 101 QYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWF------HILGVLICIAGVVLVVVSDVLS--G----------SDSSS 162 (334)
T ss_pred hcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHH------HHHHHHHHHhhhhheeeecccc--c----------ccCCC
Confidence 9999999999999999999999999999998765 5999999999998877442111 0 01112
Q ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHcCC-CCCccccchhhHHHHHHHh
Q 019995 178 QLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSE-PSDWKLGLDIGLVAVLYSV 256 (332)
Q Consensus 178 ~~~~~~G~~l~L~aa~~~A~~~vl~~~~~~~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~-~~~~~~~~~~~~~~l~~~g 256 (332)
+.+...||+++++++++||++++++++..|+.+ ......+..++|.+.+.+...++|.. ....++.+......+.|.-
T Consensus 163 ~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~-~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~ 241 (334)
T PF06027_consen 163 GSNPILGDLLALLGAILYAVSNVLEEKLVKKAP-RVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYAL 241 (334)
T ss_pred CCccchhHHHHHHHHHHHHHHHHHHHHhcccCC-HHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHH
Confidence 345589999999999999999999999999985 67778888889999888776666653 1211221221111111221
Q ss_pred -hHHHHHHHHHHhccc-h--hhhhhchHHHHHHHHHHHHhCCccccchhh---hhhheeeeeeeccCCcc
Q 019995 257 -SSYWHWVSSWLVHMV-P--VENWTSLCINVQALGHCLLYCHGCRHCRRR---FLSWKVLLINFFSNDFR 319 (332)
Q Consensus 257 -t~i~~~l~~~~l~~~-~--~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~---~~~~~~~~~~~~~~~~~ 319 (332)
...-|.+.-..+++. | ...=.....+.+++++++++||++++.--. .++-|++.-|..+++.+
T Consensus 242 ~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~ 311 (334)
T PF06027_consen 242 CLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEE 311 (334)
T ss_pred HHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCccc
Confidence 334444555666666 5 233333568899999999999999885444 48899999998766554
No 14
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.77 E-value=7.7e-17 Score=151.03 Aligned_cols=259 Identities=12% Similarity=0.053 Sum_probs=182.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 019995 14 SVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFS 93 (332)
Q Consensus 14 ~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~~ 93 (332)
++..++++++||++.+..|.. . +.++.++. |..++.+++..+....++ .+ +..++.+..-++-|++-...+.++
T Consensus 3 ~l~~lia~~~wGs~g~~~k~~-~-g~~~~~~~--~~~~g~l~~~~~~~~~~~-~~-~~~~~~~~~g~l~G~~w~ig~~~~ 76 (290)
T TIGR00776 3 ILIALIPALFWGSFVLINVKI-G-GGPYSQTL--GTTFGALILSIAIAIFVL-PE-FWALSIFLVGLLSGAFWALGQINQ 76 (290)
T ss_pred hHHHHHHHHHHhhhHHHHhcc-C-CCHHHHHH--HHHHHHHHHHHHHHHHhC-Cc-ccccHHHHHHHHHHHHHHhhhhhH
Confidence 567788999999999999985 3 68888876 888888877665554322 11 112333444455555557888999
Q ss_pred HHhhcccChhhHHHhhh-hhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeeeecCCCCCcCCCCCCCCCCc
Q 019995 94 FVGIQYSSPTLSTAMLN-LIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRR 172 (332)
Q Consensus 94 ~~gl~~t~a~~asii~~-~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~ 172 (332)
+.+.++++.+.+-.+.+ ++|++..+.+.+++|||.+++++ ....+|+++.++|+.++...++++.
T Consensus 77 ~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~--~~~~~g~~l~l~G~~l~~~~~~~~~------------ 142 (290)
T TIGR00776 77 FKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQT--LLGLLALILIIIGVYLTSRSKDKSA------------ 142 (290)
T ss_pred HHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHH--HHHHHHHHHHHHhHheEEecccccc------------
Confidence 99999999999988888 88999999999999999876531 1238999999999988753221100
Q ss_pred ccCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHH---HHHHHHHHHHHHHcCCCCCccccchhhH
Q 019995 173 LLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFF---FNTILSTAFALIVVSEPSDWKLGLDIGL 249 (332)
Q Consensus 173 ~~~~~~~~~~~G~~l~L~aa~~~A~~~vl~~~~~~~~~~~~~~~~~~~~---~g~i~l~~~~~~~~~~~~~~~~~~~~~~ 249 (332)
++....+...|..+.++|+++|+.|.+..|+. ++ +|...++.|+. .++....+.. ...+ .+. ....+
T Consensus 143 -~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~-~~~~~~~~~~~g~~~~~~~~~~~~--~~~~--~~~--~~~~~ 212 (290)
T TIGR00776 143 -GIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF--GV-DGLSVLLPQAIGMVIGGIIFNLGH--ILAK--PLK--KYAIL 212 (290)
T ss_pred -ccccccchhhHHHHHHHHHHHHHHHHHHHHHc--CC-CcceehhHHHHHHHHHHHHHHHHH--hccc--chH--HHHHH
Confidence 00000223579999999999999999997764 35 57877666654 3333332221 1111 121 12223
Q ss_pred HHHHHHh--hHHHHHHHHHHhc-cc-h--hhhhhchHHHHHHHHHHHHhCCccccchhhh
Q 019995 250 VAVLYSV--SSYWHWVSSWLVH-MV-P--VENWTSLCINVQALGHCLLYCHGCRHCRRRF 303 (332)
Q Consensus 250 ~~l~~~g--t~i~~~l~~~~l~-~~-~--~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~~ 303 (332)
..++ .| +++++.+|..+.+ +. + ++..+.++|+++++++++++||+.+..+.+.
T Consensus 213 ~~~~-~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~ 271 (290)
T TIGR00776 213 LNIL-PGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIA 271 (290)
T ss_pred HHHH-HHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeeh
Confidence 3333 55 8899999999999 66 4 8899999999999999999999999888743
No 15
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.73 E-value=5.1e-16 Score=138.20 Aligned_cols=262 Identities=11% Similarity=0.026 Sum_probs=196.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 019995 13 PSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIF 92 (332)
Q Consensus 13 ~~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~ 92 (332)
+++.+..++..-=+..-+.|..... ..|.-.+.+|..+++++++++. |-.+++.+++++..+...|..-...+.+
T Consensus 13 p~~~ll~amvsiq~Gas~Ak~LFP~-vG~~g~t~lRl~~aaLIll~l~----RPwr~r~~~~~~~~~~~yGvsLg~MNl~ 87 (292)
T COG5006 13 PILALLVAMVSIQSGASFAKSLFPL-VGAAGVTALRLAIAALILLALF----RPWRRRLSKPQRLALLAYGVSLGGMNLL 87 (292)
T ss_pred cHHHHHHHHHHHHhhHHHHHHHccc-cChhhHHHHHHHHHHHHHHHHh----hHHHhccChhhhHHHHHHHHHHHHHHHH
Confidence 6778887777777778889988775 8999999999999999998763 2233467788888999999887788899
Q ss_pred HHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeeeecCCCCCcCCCCCCCCCCc
Q 019995 93 SFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRR 172 (332)
Q Consensus 93 ~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~ 172 (332)
+|.+++..|-+.+..+.++.|+..++++- .|. ...+-+.+++.|+.++. ..+.+
T Consensus 88 FY~si~riPlGiAVAiEF~GPL~vA~~~s----Rr~--------~d~vwvaLAvlGi~lL~-p~~~~------------- 141 (292)
T COG5006 88 FYLSIERIPLGIAVAIEFTGPLAVALLSS----RRL--------RDFVWVALAVLGIWLLL-PLGQS------------- 141 (292)
T ss_pred HHHHHHhccchhhhhhhhccHHHHHHHhc----cch--------hhHHHHHHHHHHHHhhe-eccCC-------------
Confidence 99999999999999999999998776543 111 12455778888987765 22211
Q ss_pred ccCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHcCCCCCccccchhhH--H
Q 019995 173 LLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGL--V 250 (332)
Q Consensus 173 ~~~~~~~~~~~G~~l~L~aa~~~A~~~vl~~~~~~~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~--~ 250 (332)
.+.....|..+.+++..||++|++..+|.-+..+ ...-+...+.++++..+|++....+ +.-++ +.... +
T Consensus 142 ----~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~-g~~g~a~gm~vAaviv~Pig~~~ag-~~l~~--p~ll~laL 213 (292)
T COG5006 142 ----VWSLDPVGVALALGAGACWALYIVLGQRAGRAEH-GTAGVAVGMLVAALIVLPIGAAQAG-PALFS--PSLLPLAL 213 (292)
T ss_pred ----cCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCC-CchHHHHHHHHHHHHHhhhhhhhcc-hhhcC--hHHHHHHH
Confidence 1222368999999999999999999998865554 3444678888999999998764322 21111 11111 2
Q ss_pred HHHHHhhHHHHHHHHHHhccch---hhhhhchHHHHHHHHHHHHhCCccccchhh---hhhheeeeeee
Q 019995 251 AVLYSVSSYWHWVSSWLVHMVP---VENWTSLCINVQALGHCLLYCHGCRHCRRR---FLSWKVLLINF 313 (332)
Q Consensus 251 ~l~~~gt~i~~~l~~~~l~~~~---~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~---~~~~~~~~~~~ 313 (332)
.+..++|++.|.+--.+++|.| .+....+||.++++.|+++|||.++..+-. .++-.+.++-.
T Consensus 214 gvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~l 282 (292)
T COG5006 214 GVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTL 282 (292)
T ss_pred HHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcccc
Confidence 2233349999999999999994 999999999999999999999999987765 35555554443
No 16
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.71 E-value=1.9e-15 Score=137.68 Aligned_cols=257 Identities=12% Similarity=0.027 Sum_probs=190.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCC---CCCCHHHHHHHHHHHHHH
Q 019995 10 AALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSER---PQLTFSILCSFFLLSVFG 86 (332)
Q Consensus 10 ~~~~~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~---~~~~~~~~~~~~~~gl~g 86 (332)
..++++..+.+.++||..+...|.. ++ .|+..+.++|...+.++++......++.+. ...+.|.+..+.+.+++-
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll-~~-~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li 82 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLL-EP-LPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLI 82 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHH-cc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHH
Confidence 3578999999999999999999974 54 999999999999999988876555433221 122345566666677776
Q ss_pred HHHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeeeecCCCCCcCCCCC
Q 019995 87 CSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSH 166 (332)
Q Consensus 87 ~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~~~~~~~~~ 166 (332)
..+...+.|+...-..-++|+=.+..|++.++++.+++|||+++- |+++++++.+||.......|
T Consensus 83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~------Q~iAV~lA~~GV~~~~~~~g--------- 147 (293)
T COG2962 83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRL------QWIAVGLAAAGVLIQTWLLG--------- 147 (293)
T ss_pred HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHH------HHHHHHHHHHHHHHHHHHcC---------
Confidence 899999999999999999999999999999999999999999765 59999999999987553211
Q ss_pred CCCCCcccCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHcCCCCCccccch
Q 019995 167 SGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLD 246 (332)
Q Consensus 167 ~~~~~~~~~~~~~~~~~G~~l~L~aa~~~A~~~vl~~~~~~~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~~~~~~~ 246 (332)
+..+ ..+.=+++|+.|..+ ||.+ +.+ ..+-....+..-.+..+......+.+.........
T Consensus 148 -----------~lpw-----val~la~sf~~Ygl~-RK~~-~v~-a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~ 208 (293)
T COG2962 148 -----------SLPW-----VALALALSFGLYGLL-RKKL-KVD-ALTGLTLETLLLLPVALIYLLFLADSGQFLQQNAN 208 (293)
T ss_pred -----------CCcH-----HHHHHHHHHHHHHHH-HHhc-CCc-hHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCc
Confidence 1222 346678999999977 4443 333 34444455555555555544444432210111112
Q ss_pred hhHHHHHHHh--hHHHHHHHHHHhccch---hhhhhchHHHHHHHHHHHHhCCccccchhh
Q 019995 247 IGLVAVLYSV--SSYWHWVSSWLVHMVP---VENWTSLCINVQALGHCLLYCHGCRHCRRR 302 (332)
Q Consensus 247 ~~~~~l~~~g--t~i~~~l~~~~l~~~~---~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~ 302 (332)
..+.-++..| |+++..++..+-+|.| .+...|++|..--++|.+++||+++..+-.
T Consensus 209 ~~~~LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~ 269 (293)
T COG2962 209 SLWLLLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLV 269 (293)
T ss_pred hHHHHHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHH
Confidence 2344455666 9999999999999995 999999999999999999999999987765
No 17
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.56 E-value=1.9e-15 Score=135.49 Aligned_cols=267 Identities=13% Similarity=0.086 Sum_probs=177.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHH
Q 019995 10 AALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSS 89 (332)
Q Consensus 10 ~~~~~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~ 89 (332)
..++..++.++ ..+-++.++.+...+ .||...+-.|+..-.+.-.|.....+.....+...| +.+++.|+.|+.+
T Consensus 36 p~~gl~l~~vs-~ff~~~~vv~t~~~e--~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R--~~LiLRg~mG~tg 110 (346)
T KOG4510|consen 36 PNLGLLLLTVS-YFFNSCMVVSTKVLE--NDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKR--KWLILRGFMGFTG 110 (346)
T ss_pred CccCceehhhH-HHHhhHHHhhhhhhc--cChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcE--EEEEeehhhhhhH
Confidence 33445555566 445555555555543 699999999966655555544322211111111222 3567899999778
Q ss_pred HHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeeeecCCCCCcCCCCCCCC
Q 019995 90 QIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGS 169 (332)
Q Consensus 90 ~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~~~~~~~~~~~~ 169 (332)
..+.|++++|.+-+.|++|..++|+++.++++.++|||.+. ...+|..+.+.|+++++ -+++.+..
T Consensus 111 vmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~------~eaL~s~itl~GVVLIv---RPpFlFG~----- 176 (346)
T KOG4510|consen 111 VMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTK------FEALGSLITLLGVVLIV---RPPFLFGD----- 176 (346)
T ss_pred HHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcH------HHHHHHHHhhheEEEEe---cCCcccCC-----
Confidence 88888899999999999999999999999999999999875 45999999999999986 22221110
Q ss_pred CCcccCCCC-ccchhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHcCCCCCccccchhh
Q 019995 170 PRRLLLSPQ-LSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIG 248 (332)
Q Consensus 170 ~~~~~~~~~-~~~~~G~~l~L~aa~~~A~~~vl~~~~~~~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~~~~~~~~~ 248 (332)
+.+++.+.. .....|....+.+++.-|.-.++.|++-|+.....+ ..+..+++.+..++..... +.. +|+- ....
T Consensus 177 ~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h~~ms-vsyf~~i~lV~s~I~~~~i-g~~-~lP~-cgkd 252 (346)
T KOG4510|consen 177 TTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNAHAIMS-VSYFSLITLVVSLIGCASI-GAV-QLPH-CGKD 252 (346)
T ss_pred CccccccccccccCCchHHHHHhHhhhhhHHHHHHHhhccccEEEE-ehHHHHHHHHHHHHHHhhc-cce-ecCc-cccc
Confidence 111111111 233567888888888888777777887677542233 3444556655554432211 111 1111 1123
Q ss_pred HHHHHHHh--hHHHHHHHHHHhccc-h--hhhhhchHHHHHHHHHHHHhCCccccc
Q 019995 249 LVAVLYSV--SSYWHWVSSWLVHMV-P--VENWTSLCINVQALGHCLLYCHGCRHC 299 (332)
Q Consensus 249 ~~~l~~~g--t~i~~~l~~~~l~~~-~--~s~~~~l~Pv~a~il~~~~LgE~~~~~ 299 (332)
++-++.+| +.+++.+.+.++++- + +|+..+.+-++|.++..+++||.|++.
T Consensus 253 r~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~w 308 (346)
T KOG4510|consen 253 RWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIW 308 (346)
T ss_pred eEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHH
Confidence 44444556 778889999998877 5 999999999999999999999999874
No 18
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.47 E-value=6.8e-14 Score=113.12 Aligned_cols=123 Identities=18% Similarity=0.332 Sum_probs=106.2
Q ss_pred HHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHhhccc
Q 019995 22 LAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CSSQIFSFVGIQYS 100 (332)
Q Consensus 22 ~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g-~~~~~~~~~gl~~t 100 (332)
++||...++.|...++ .||....++|+..+++ +++.....+++...+.+.+++......|.++ ..++.+++.|++++
T Consensus 1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 78 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI 78 (126)
T ss_pred ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence 3689999999998876 9999999999999998 5555555444333566677888888899987 89999999999999
Q ss_pred ChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceee
Q 019995 101 SPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVV 152 (332)
Q Consensus 101 ~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll 152 (332)
+++.++.+.++.|+++.++++++++|+++++ +++|+++.+.|+.++
T Consensus 79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~------~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 79 SASIVSILQYLSPVFAAILGWLFLGERPSWR------QIIGIILIIIGVVLI 124 (126)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999876 599999999998764
No 19
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.45 E-value=5.8e-11 Score=111.96 Aligned_cols=255 Identities=14% Similarity=0.144 Sum_probs=182.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccChhhHHHhhhhhHHHHHHHH
Q 019995 41 KYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLA 120 (332)
Q Consensus 41 p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila 120 (332)
|..+++.++..+.++-.+.....+++.+ ++..++.....+++..+...+.+.+++|.|...-.++-++.|+.+++++
T Consensus 32 ~~~lt~~q~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~ 108 (303)
T PF08449_consen 32 PLFLTFVQFAFNALFSFILLSLFKFPKS---RKIPLKKYAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILG 108 (303)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhccccCC---CcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHH
Confidence 8899999999998877665444321222 2233556678888888999999999999999999999999999999999
Q ss_pred HHHHhhccccccccccchhhhhhheeccceeeeecCCCCCcCCCCCCCCCCcccCCCCccchhHHHHHHHHHHHHHHHHH
Q 019995 121 IIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFI 200 (332)
Q Consensus 121 ~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~L~aa~~~A~~~v 200 (332)
.+++|+|.+++ |++++++-.+|+++....+..+.+ + +...+.+...|+++.+++.++.|...+
T Consensus 109 ~l~~~k~y~~~------~~~~v~li~~Gv~~~~~~~~~~~~----------~-~~~~~~~~~~G~~ll~~sl~~~a~~~~ 171 (303)
T PF08449_consen 109 VLILGKRYSRR------QYLSVLLITIGVAIFTLSDSSSSS----------S-SNSSSFSSALGIILLLLSLLLDAFTGV 171 (303)
T ss_pred HHhcCccccHH------HHHHHHHHHhhHheeeeccccccc----------c-cccccccchhHHHHHHHHHHHHHHHHH
Confidence 99999887765 599999999999887654322110 0 011112223499999999999999999
Q ss_pred HHHHHHHhcc-hhHHHHHHHHHHHHHHHHHHHHH--HcCCCCCcc---ccchhhHHHHHHHh--hHHHHHHHHHHhccc-
Q 019995 201 LQALILRKFA-AVLIIMFYLFFFNTILSTAFALI--VVSEPSDWK---LGLDIGLVAVLYSV--SSYWHWVSSWLVHMV- 271 (332)
Q Consensus 201 l~~~~~~~~~-~~~~~~~~~~~~g~i~l~~~~~~--~~~~~~~~~---~~~~~~~~~l~~~g--t~i~~~l~~~~l~~~- 271 (332)
.++|..++++ ++..+.++...++.+...+.... .++....++ .++. .+..++... ..++.....+.+++.
T Consensus 172 ~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~-~~~~l~~~s~~~~~g~~~i~~~~~~~~ 250 (303)
T PF08449_consen 172 YQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPS-VLLYLLLFSLTGALGQFFIFYLIKKFS 250 (303)
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999977654 56677888989998888777665 222111111 1121 233333222 667777777788888
Q ss_pred h--hhhhhchHHHHHHHHHHHHhCCccccchhh---hhhheeeeeeeccC
Q 019995 272 P--VENWTSLCINVQALGHCLLYCHGCRHCRRR---FLSWKVLLINFFSN 316 (332)
Q Consensus 272 ~--~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~---~~~~~~~~~~~~~~ 316 (332)
| .++...+--+++++++.+++||++++.+-. .+..|..+-+.-||
T Consensus 251 al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~ 300 (303)
T PF08449_consen 251 ALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKK 300 (303)
T ss_pred chhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhc
Confidence 6 888888999999999999999999976654 35555555444444
No 20
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.39 E-value=8e-12 Score=117.17 Aligned_cols=217 Identities=18% Similarity=0.200 Sum_probs=149.6
Q ss_pred HHHHHHHHHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeeeecCCCCC
Q 019995 81 LLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPL 160 (332)
Q Consensus 81 ~~gl~g~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~~~ 160 (332)
....+.+..++.+..++.+|+++..+++.+++-+||..++.++..||+++. |.+++.+++.|+++++..+....
T Consensus 164 ~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~s------Kllav~~si~GViiVt~~~s~~~ 237 (416)
T KOG2765|consen 164 FFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLS------KLLAVFVSIAGVIIVTMGDSKQN 237 (416)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHH------HHHHHHHhhccEEEEEecccccc
Confidence 344444888999999999999999999999999999999999999999865 69999999999998874422110
Q ss_pred cCCCCCCCCCCcccCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHHHHHHHHHHHHHHHcC-
Q 019995 161 IGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFA---AVLIIMFYLFFFNTILSTAFALIVVS- 236 (332)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~G~~l~L~aa~~~A~~~vl~~~~~~~~~---~~~~~~~~~~~~g~i~l~~~~~~~~~- 236 (332)
++ .......+|+++++++|+.||+|+++.||...+.. |...+..+..++..+++.|...+...
T Consensus 238 ------------~~-~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~ 304 (416)
T KOG2765|consen 238 ------------SD-LPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFF 304 (416)
T ss_pred ------------cc-CCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHh
Confidence 01 11223478999999999999999999998765442 33344444445555555554433211
Q ss_pred CCCCccccchhhHHHHHHH---hhHHHHHHHHHHhccc-h--hhhhhchHHHHHHHHHHHHhCCcccc---chhhhhhhe
Q 019995 237 EPSDWKLGLDIGLVAVLYS---VSSYWHWVSSWLVHMV-P--VENWTSLCINVQALGHCLLYCHGCRH---CRRRFLSWK 307 (332)
Q Consensus 237 ~~~~~~~~~~~~~~~l~~~---gt~i~~~l~~~~l~~~-~--~s~~~~l~Pv~a~il~~~~LgE~~~~---~~~~~~~~~ 307 (332)
..+.++.+...+...+++. ||.++-++|.++.-.. | +..=..++...+++...++=|.++++ .+-+.+-.+
T Consensus 305 ~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~ 384 (416)
T KOG2765|consen 305 GEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVG 384 (416)
T ss_pred ccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHH
Confidence 0111112122223233333 3999999999999888 7 44445567778999998877888876 333445556
Q ss_pred eeeeeeccC
Q 019995 308 VLLINFFSN 316 (332)
Q Consensus 308 ~~~~~~~~~ 316 (332)
-+++|.-.+
T Consensus 385 Fv~vn~~~~ 393 (416)
T KOG2765|consen 385 FVIVNISSE 393 (416)
T ss_pred Hhheecccc
Confidence 666776544
No 21
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.38 E-value=3.7e-12 Score=102.52 Aligned_cols=134 Identities=13% Similarity=0.133 Sum_probs=116.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHHH
Q 019995 13 PSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSER-PQLTFSILCSFFLLSVFGCSSQI 91 (332)
Q Consensus 13 ~~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~-~~~~~~~~~~~~~~gl~g~~~~~ 91 (332)
..+..+++++.||...++.|+++++ .||..-++.|-.....++..+.+...+... ...+.|.|.++++-|+.+.....
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~-vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl 82 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEG-VDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWL 82 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccc-cCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHH
Confidence 4567788999999999999999975 999999999999999988887765433221 23567889999999988899999
Q ss_pred HHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeee
Q 019995 92 FSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (332)
Q Consensus 92 ~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~ 153 (332)
+||.+++.-.++...-+-.++|++++++++++++||++.++ ++|+++-.+|+++++
T Consensus 83 ~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~------~iG~~LI~~Gailvs 138 (140)
T COG2510 83 LYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPT------WIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHH------HHHHHHHHhCeeeEe
Confidence 99999999999999999999999999999999999998875 999999999998865
No 22
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.20 E-value=3.5e-10 Score=103.57 Aligned_cols=132 Identities=13% Similarity=0.120 Sum_probs=110.0
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhCCCCh--HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH
Q 019995 9 RAALPSVGMVIVLLAQVSNMEVIKAAMSKGINK--YVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG 86 (332)
Q Consensus 9 ~~~~~~l~li~~~~iwg~~~v~~K~~~~~~~~p--~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g 86 (332)
...++....+++++.|+...+..|...++ .+| .....+|+.++.+++.++....++ ....+.+++......|+++
T Consensus 125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 201 (260)
T TIGR00950 125 INPAGLLLGLGSGISFALGTVLYKRLVKK-EGPELLQFTGWVLLLGALLLLPFAWFLGP--NPQALSLQWGALLYLGLIG 201 (260)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhHHhhc-CCchHHHHHHHHHHHHHHHHHHHHHhcCC--CCCcchHHHHHHHHHHHHH
Confidence 34568889999999999999999998754 664 455567899999998888655322 2233567777788888888
Q ss_pred -HHHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccc
Q 019995 87 -CSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGA 149 (332)
Q Consensus 87 -~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv 149 (332)
...+.++++++++.+++.++.+.++.|+++.++++++++|+++.+ +++|..+.+.|+
T Consensus 202 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~------~~~G~~li~~g~ 259 (260)
T TIGR00950 202 TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLP------QLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHhc
Confidence 789999999999999999999999999999999999999999876 499999998886
No 23
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.09 E-value=1.1e-10 Score=94.07 Aligned_cols=102 Identities=22% Similarity=0.325 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCC--CCCCCHHHHHHHHHHHHHH-HHHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHH
Q 019995 45 IVYSDALSSLFFLFCSFLFHRSE--RPQLTFSILCSFFLLSVFG-CSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAI 121 (332)
Q Consensus 45 ~~~R~~~a~l~ll~~~~~~~~~~--~~~~~~~~~~~~~~~gl~g-~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~ 121 (332)
+.+|+..+.+++......+++.+ .+..+.+++......|+++ ..++.++++|+++++ +.++.+.+++|+++.++++
T Consensus 1 aa~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~ 79 (113)
T PF13536_consen 1 AAFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSW 79 (113)
T ss_pred CHHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHH
Confidence 36899999999888766632211 1233345566777788888 699999999999999 5888999999999999999
Q ss_pred HHHhhccccccccccchhhhhhheeccceeee
Q 019995 122 IFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (332)
Q Consensus 122 l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~ 153 (332)
+++|||+++++ ++|++++++|++++.
T Consensus 80 ~~~~er~~~~~------~~a~~l~~~Gv~li~ 105 (113)
T PF13536_consen 80 LFFKERLSPRR------WLAILLILIGVILIA 105 (113)
T ss_pred HHhcCCCCHHH------HHHHHHHHHHHHHHh
Confidence 99999998764 999999999999876
No 24
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=98.98 E-value=1.2e-07 Score=86.70 Aligned_cols=214 Identities=14% Similarity=0.145 Sum_probs=140.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheecccee
Q 019995 72 TFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFV 151 (332)
Q Consensus 72 ~~~~~~~~~~~gl~g~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~l 151 (332)
++|+..+..+-+++....+.+.+.++++.+|+.-.++.++-.++|++++.+++|+|++++| |+++.+-++|+.+
T Consensus 13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~q------W~aL~lL~~Gv~l 86 (244)
T PF04142_consen 13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQ------WLALFLLVAGVVL 86 (244)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhh------HHHHHHHHHHHhe
Confidence 3566777788888889999999999999999999999999999999999999999998765 8999999999988
Q ss_pred eeecCCCCCcCCCCCCCCCCcc--cCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH-HHHHHHHHHHHHHH
Q 019995 152 VTFYKGPPLIGELSHSGSPRRL--LLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLI-IMFYLFFFNTILST 228 (332)
Q Consensus 152 l~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~G~~l~L~aa~~~A~~~vl~~~~~~~~~~~~~-~~~~~~~~g~i~l~ 228 (332)
+.......-+ +.+.++ ....+.+...|.++.+.++++-++..++.+|.+|+.+.++. -+.+....|.+..+
T Consensus 87 v~~~~~~~~~------~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~ 160 (244)
T PF04142_consen 87 VQLSSSQSSD------NSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNL 160 (244)
T ss_pred eecCCccccc------cccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHH
Confidence 7533211100 000000 00112345789999999999999999999999888643333 34444555665555
Q ss_pred HHHHHHcCC-C--CCccccch-hhHHHHHHHhhHHHHHHHHHHhccc-h--hhhhhchHHHHHHHHHHHHhCCccccc
Q 019995 229 AFALIVVSE-P--SDWKLGLD-IGLVAVLYSVSSYWHWVSSWLVHMV-P--VENWTSLCINVQALGHCLLYCHGCRHC 299 (332)
Q Consensus 229 ~~~~~~~~~-~--~~~~~~~~-~~~~~l~~~gt~i~~~l~~~~l~~~-~--~s~~~~l~Pv~a~il~~~~LgE~~~~~ 299 (332)
+.....+.+ . ..+-.+++ ..|..+.. .+++=.+-...+|+. . =..-..+.-+++.+.++.++|++++..
T Consensus 161 ~~~~~~~~~~~~~~g~f~G~~~~~~~~i~~--~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~ 236 (244)
T PF04142_consen 161 LALLLSDGSAISESGFFHGYSWWVWIVIFL--QAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLS 236 (244)
T ss_pred HHHhcccccccccCCchhhcchHHHHHHHH--HHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchH
Confidence 543332221 1 11101111 22322222 333444455566666 3 122223455788999999999998864
No 25
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=98.97 E-value=8.4e-09 Score=97.05 Aligned_cols=258 Identities=12% Similarity=0.090 Sum_probs=179.8
Q ss_pred HHHHHHHh--CCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccChhhHH
Q 019995 29 EVIKAAMS--KGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLST 106 (332)
Q Consensus 29 v~~K~~~~--~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~~~~gl~~t~a~~as 106 (332)
...|..++ +---|..++..++..+.+.++....+...+..+..++..+..++.+|++.++...+-..+++|.+.+...
T Consensus 34 ~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q 113 (316)
T KOG1441|consen 34 ILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFCISHVLGNVSLSYVPVSFYQ 113 (316)
T ss_pred EeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHHHHHHhcchhhhccchhHHH
Confidence 34688887 4346788888888877777665543322222222233566778899999999999999999999999999
Q ss_pred HhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeeeecCCCCCcCCCCCCCCCCcccCCCCccchhHHH
Q 019995 107 AMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGF 186 (332)
Q Consensus 107 ii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 186 (332)
.+=+++|+++++++.++.+|+.+++. +..++....|+.+.+.+ + ... +..|.+
T Consensus 114 ~iKa~~P~~tvl~~~~~~~~~~s~~~------~lsL~piv~GV~ias~~---e-----------------~~f-n~~G~i 166 (316)
T KOG1441|consen 114 TIKALMPPFTVLLSVLLLGKTYSSMT------YLSLLPIVFGVAIASVT---E-----------------LSF-NLFGFI 166 (316)
T ss_pred HHHhhcchhHHHHHHHHhCCCCcceE------EEEEEEeeeeEEEeeec---c-----------------ccc-cHHHHH
Confidence 99999999999999999999987664 67788888999876521 1 112 257999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH--hcc-hhHHHHHHHHHHHHHHHH-HHHHHHcCCCC------CccccchhhHHHHHHHh
Q 019995 187 FLAAEAFMNSAWFILQALILR--KFA-AVLIIMFYLFFFNTILST-AFALIVVSEPS------DWKLGLDIGLVAVLYSV 256 (332)
Q Consensus 187 l~L~aa~~~A~~~vl~~~~~~--~~~-~~~~~~~~~~~~g~i~l~-~~~~~~~~~~~------~~~~~~~~~~~~l~~~g 256 (332)
.++++.++.+...+++++..+ +.+ ++.....++.-++.+.++ |.....|++.. .|+. .....++..
T Consensus 167 ~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~----~~~~~~~~s 242 (316)
T KOG1441|consen 167 SAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFV----TFLILLLNS 242 (316)
T ss_pred HHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccch----hhHHHHHHH
Confidence 999999999999999999874 221 578888888888888888 76655444221 2322 122222222
Q ss_pred --hHHHHHHHHHHhccc-h--hhhhhchHHHHHHHHHHHHhCCccccchhh---hhhheeeeeeeccCC
Q 019995 257 --SSYWHWVSSWLVHMV-P--VENWTSLCINVQALGHCLLYCHGCRHCRRR---FLSWKVLLINFFSND 317 (332)
Q Consensus 257 --t~i~~~l~~~~l~~~-~--~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~---~~~~~~~~~~~~~~~ 317 (332)
...-....++.+.+. | -++.+.+--.+.+..|+++++|+.++.+-. .-+-||.+=|=.|++
T Consensus 243 v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~ 311 (316)
T KOG1441|consen 243 VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLK 311 (316)
T ss_pred HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhh
Confidence 122224455677777 6 556666666778888999999977765443 345566654444443
No 26
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.86 E-value=3.6e-08 Score=92.45 Aligned_cols=133 Identities=14% Similarity=0.067 Sum_probs=106.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH-HHH
Q 019995 11 ALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CSS 89 (332)
Q Consensus 11 ~~~~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g-~~~ 89 (332)
..+.+..+.+++.|+...+..|...+ +.+|..... -..++++.+.++...... ....+...+...+.+|+++ .+.
T Consensus 147 ~~G~ll~l~aa~~~a~~~v~~r~~~~-~~~~~~~~~-~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~~ 222 (293)
T PRK10532 147 LTGAALALGAGACWAIYILSGQRAGA-EHGPATVAI-GSLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTALP 222 (293)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhc-cCCchHHHH-HHHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHHH
Confidence 45788899999999999999998755 478877654 446666777776654322 1223445555567888988 888
Q ss_pred HHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeee
Q 019995 90 QIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (332)
Q Consensus 90 ~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~ 153 (332)
+.++++++++.+++.++.+.++.|+++.++++++++|+++.. +++|.++.++|++...
T Consensus 223 ~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~------~~iG~~lIl~~~~~~~ 280 (293)
T PRK10532 223 YSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLI------QWLALGAIIAASMGST 280 (293)
T ss_pred HHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999876 4999999999987754
No 27
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.83 E-value=9.9e-09 Score=82.64 Aligned_cols=105 Identities=15% Similarity=0.161 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHcCCC-CCccccchhhHHHHHHHh---hHHHHHHHHHHh
Q 019995 193 FMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEP-SDWKLGLDIGLVAVLYSV---SSYWHWVSSWLV 268 (332)
Q Consensus 193 ~~~A~~~vl~~~~~~~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~-~~~~~~~~~~~~~l~~~g---t~i~~~l~~~~l 268 (332)
++||.+.+..|+..++. |+...+.+++..+++ +++.....+... ..++ ...+..+++.| +++++.++++++
T Consensus 1 ~~~a~~~~~~k~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~ 75 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKI-SPLSITFWRFLIAGI-LLILLLILGRKPFKNLS---PRQWLWLLFLGLLGTALAYLLYFYAL 75 (126)
T ss_pred ceeeeHHHHHHHHhccC-CHHHHHHHHHHHHHH-HHHHHHhhccccccCCC---hhhhhhhhHhhccceehHHHHHHHHH
Confidence 47899999999999887 489999999999998 666655544322 2222 12344444455 789999999999
Q ss_pred ccc-h--hhhhhchHHHHHHHHHHHHhCCccccchhh
Q 019995 269 HMV-P--VENWTSLCINVQALGHCLLYCHGCRHCRRR 302 (332)
Q Consensus 269 ~~~-~--~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~ 302 (332)
++. + ++.+.+++|+++.+++++++||+++..+-.
T Consensus 76 ~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~ 112 (126)
T PF00892_consen 76 KYISASIVSILQYLSPVFAAILGWLFLGERPSWRQII 112 (126)
T ss_pred HhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHH
Confidence 999 5 999999999999999999999999875544
No 28
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.80 E-value=5.2e-08 Score=91.32 Aligned_cols=135 Identities=15% Similarity=0.022 Sum_probs=109.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH-HHH
Q 019995 11 ALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CSS 89 (332)
Q Consensus 11 ~~~~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g-~~~ 89 (332)
..+.+..+.+++.|+...+..|... . -++....++++.++++.+.++............+.++|......|+++ .+.
T Consensus 149 ~~G~l~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~ 226 (292)
T PRK11272 149 PWGAILILIASASWAFGSVWSSRLP-L-PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIA 226 (292)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcC-C-CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHH
Confidence 4578888899999999999999853 3 345667788999998888877654322111122456788888889988 899
Q ss_pred HHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeee
Q 019995 90 QIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (332)
Q Consensus 90 ~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~ 153 (332)
+.++++++++.++++++.+.++.|++++++++++++|+++.. +++|.++.+.|+.+..
T Consensus 227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~------~iiG~~lIi~gv~~~~ 284 (292)
T PRK11272 227 ISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPI------EWLALGVIVFAVVLVT 284 (292)
T ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH------HHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999876 4999999999997754
No 29
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.73 E-value=1.5e-07 Score=76.17 Aligned_cols=124 Identities=8% Similarity=-0.108 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHcCCCCCccccchhhHHHHHHHh--hHHHHH
Q 019995 185 GFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSV--SSYWHW 262 (332)
Q Consensus 185 ~~l~L~aa~~~A~~~vl~~~~~~~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--t~i~~~ 262 (332)
..+++++|+.+++-.++.|-..|+. ||...+....++..+.+........+. ........-.|..++..| ++++..
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl~~v-dp~~At~IRtiVi~~~l~~v~~~~g~~-~~~~~~~~k~~lflilSGla~glswl 82 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGLEGV-DPDFATTIRTIVILIFLLIVLLVTGNW-QAGGEIGPKSWLFLILSGLAGGLSWL 82 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHHHHHHHHhcCce-ecccccCcceehhhhHHHHHHHHHHH
Confidence 5688999999999999988778887 588888888888888887776554331 111011223566666777 999999
Q ss_pred HHHHHhccc--h-hhhhhchHHHHHHHHHHHHhCCccccchhh---hhhheeee
Q 019995 263 VSSWLVHMV--P-VENWTSLCINVQALGHCLLYCHGCRHCRRR---FLSWKVLL 310 (332)
Q Consensus 263 l~~~~l~~~--~-~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~---~~~~~~~~ 310 (332)
+|+++++.- | +++..-..|++++++|+++|||+++.++-+ .+.-|+++
T Consensus 83 ~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gail 136 (140)
T COG2510 83 LYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAIL 136 (140)
T ss_pred HHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeee
Confidence 999999998 4 999999999999999999999999986655 45555554
No 30
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.70 E-value=2e-07 Score=87.54 Aligned_cols=132 Identities=16% Similarity=0.106 Sum_probs=100.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH
Q 019995 11 ALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQ 90 (332)
Q Consensus 11 ~~~~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~ 90 (332)
..+.++.+.++++|+...+..|...+ +.++.... +..+++.+.+.... ........+.+.+......|+...+.+
T Consensus 155 ~~G~~~~l~aa~~~A~~~v~~k~~~~-~~~~~~~~---~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~~~~t~~~~ 229 (295)
T PRK11689 155 PLSYGLAFIGAFIWAAYCNVTRKYAR-GKNGITLF---FILTALALWIKYFL-SPQPAMVFSLPAIIKLLLAAAAMGFGY 229 (295)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhccC-CCCchhHH---HHHHHHHHHHHHHH-hcCccccCCHHHHHHHHHHHHHHHHHH
Confidence 34778899999999999999998644 47776543 23344444443332 221112345566777666664337899
Q ss_pred HHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeee
Q 019995 91 IFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (332)
Q Consensus 91 ~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~ 153 (332)
.++++++++.+++.++.+.++.|++..++++++++|+++..+ ++|.++.+.|+.+..
T Consensus 230 ~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~------~iG~~lI~~gv~~~~ 286 (295)
T PRK11689 230 AAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSF------WQGVAMVTAGSLLCW 286 (295)
T ss_pred HHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHhHHHHh
Confidence 999999999999999999999999999999999999998764 999999999987653
No 31
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.65 E-value=3.2e-07 Score=88.51 Aligned_cols=135 Identities=10% Similarity=0.114 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCh-HHHHHHHHHHHHHHHHHHHHHhhcCCC----CCCCHHHHHHHHHHHHHHH
Q 019995 13 PSVGMVIVLLAQVSNMEVIKAAMSKGINK-YVIIVYSDALSSLFFLFCSFLFHRSER----PQLTFSILCSFFLLSVFGC 87 (332)
Q Consensus 13 ~~l~li~~~~iwg~~~v~~K~~~~~~~~p-~~~~~~R~~~a~l~ll~~~~~~~~~~~----~~~~~~~~~~~~~~gl~g~ 87 (332)
+.+.++.+++.|+...++.|...+. .|+ ...+++...++++.+.+.....++... ...... ...++..|+...
T Consensus 190 G~~l~l~aa~~wa~~~il~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~t~ 267 (358)
T PLN00411 190 GGALLTIQGIFVSVSFILQAHIMSE-YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAIITS 267 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHHHH
Confidence 5567788999999999999987665 644 466777777777766555544332111 111222 222333444336
Q ss_pred HHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeeeec
Q 019995 88 SSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFY 155 (332)
Q Consensus 88 ~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~ 155 (332)
+.+.++++++++.+|+.+++..++.|++++++++++++|+++..+ ++|.++.+.|+.+....
T Consensus 268 lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~------~iG~~LIl~Gv~l~~~~ 329 (358)
T PLN00411 268 VYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGC------LIGGILITLGFYAVMWG 329 (358)
T ss_pred HHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHHhh
Confidence 688899999999999999999999999999999999999998764 99999999999887543
No 32
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=98.64 E-value=3.2e-05 Score=73.00 Aligned_cols=268 Identities=13% Similarity=0.120 Sum_probs=173.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCC---CChHHHHHHHHHHHHHHHHHHHHHhhcC--C--CCCC------CHHHHHH
Q 019995 12 LPSVGMVIVLLAQVSNMEVIKAAMSKG---INKYVIIVYSDALSSLFFLFCSFLFHRS--E--RPQL------TFSILCS 78 (332)
Q Consensus 12 ~~~l~li~~~~iwg~~~v~~K~~~~~~---~~p~~~~~~R~~~a~l~ll~~~~~~~~~--~--~~~~------~~~~~~~ 78 (332)
.-++.++...+.+++..+..|..-..+ +.|.+.+++--.+-.++.....+...|+ + .+.. .+++..+
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 456777888888999999999876555 6777888777777766666555544222 1 1111 2334556
Q ss_pred HHHHHHHHHHHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeeeecCCC
Q 019995 79 FFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGP 158 (332)
Q Consensus 79 ~~~~gl~g~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~ 158 (332)
..+-+++.++++-++|.++.+.+|++-.+..++--+-|+++..+++++|++++| |..+++.++|+.++-....+
T Consensus 95 ~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Q------w~Al~lL~~Gv~~vQ~~~~~ 168 (345)
T KOG2234|consen 95 VSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQ------WMALVLLFAGVALVQLPSLS 168 (345)
T ss_pred HHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHH------HHHHHHHHHHHHHHhccCCC
Confidence 667777777888899999999999999999999999999999999999998775 88899999999886522111
Q ss_pred CCcCCCCCCCCCCccc-CCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH-HHHHHHHHHHHHHHHHHHHHcC
Q 019995 159 PLIGELSHSGSPRRLL-LSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLI-IMFYLFFFNTILSTAFALIVVS 236 (332)
Q Consensus 159 ~~~~~~~~~~~~~~~~-~~~~~~~~~G~~l~L~aa~~~A~~~vl~~~~~~~~~~~~~-~~~~~~~~g~i~l~~~~~~~~~ 236 (332)
. .++. ...+.+...|....+.++++-+...++..|.+|+-+.+.. -+.-..++|.++.+...+....
T Consensus 169 ~-----------~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~ 237 (345)
T KOG2234|consen 169 P-----------TGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDG 237 (345)
T ss_pred C-----------CCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 0 0001 1234455789999999999999999999999877542333 3333445666655544333222
Q ss_pred CCCCcc---ccch-hhHHHHHHHhhHHHHHHHHHHhccch--h-hhhhchHHHHHHHHHHHHhCCcccc
Q 019995 237 EPSDWK---LGLD-IGLVAVLYSVSSYWHWVSSWLVHMVP--V-ENWTSLCINVQALGHCLLYCHGCRH 298 (332)
Q Consensus 237 ~~~~~~---~~~~-~~~~~l~~~gt~i~~~l~~~~l~~~~--~-s~~~~l~Pv~a~il~~~~LgE~~~~ 298 (332)
+...|. .++. ..|..++-.+ ++=.+-...+|+.+ . .--..+..+++.+.++.++|..++.
T Consensus 238 ~~i~~~gff~G~s~~vw~vVl~~a--~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~ 304 (345)
T KOG2234|consen 238 EAINEYGFFYGYSSIVWLVVLLNA--VGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTL 304 (345)
T ss_pred cccccCCccccccHHHHHHHHHHh--ccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchH
Confidence 111121 1111 2343333333 22223334444442 1 1111234577888888888888885
No 33
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.57 E-value=1.8e-07 Score=87.13 Aligned_cols=133 Identities=15% Similarity=0.037 Sum_probs=90.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChH----HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH
Q 019995 11 ALPSVGMVIVLLAQVSNMEVIKAAMSKGINKY----VIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG 86 (332)
Q Consensus 11 ~~~~l~li~~~~iwg~~~v~~K~~~~~~~~p~----~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g 86 (332)
.++....+.+++.|+...+..|...+ +.+|. ....+.+...++.+.+.....+++ ....+...+......+.+.
T Consensus 143 ~~g~~~~l~aal~~a~~~i~~k~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 220 (281)
T TIGR03340 143 RKAYAWALAAALGTAIYSLSDKAAAL-GVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGR-SMFPYARQILPSATLGGLM 220 (281)
T ss_pred hhHHHHHHHHHHHHHHhhhhcccccc-chhcccccHHHHHHHHHHHHHHHHHHHHHHhcc-chhhhHHHHHHHHHHHHHH
Confidence 45666778889999999999987532 24442 233333333322222222111111 1111222334445666666
Q ss_pred -HHHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheecccee
Q 019995 87 -CSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFV 151 (332)
Q Consensus 87 -~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~l 151 (332)
...+.++++++++.+++.++...++.|++..++++++++|+++.. +++|.++.++|+.+
T Consensus 221 s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~------~~iG~~lil~Gv~l 280 (281)
T TIGR03340 221 IGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLT------RLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHH------HHHHHHHHHHhHHh
Confidence 788999999999999999999999999999999999999999876 49999999999864
No 34
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.56 E-value=1.4e-06 Score=81.84 Aligned_cols=137 Identities=14% Similarity=0.131 Sum_probs=101.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCC--hHHHHHHHHHHHHHHHHHHHHHhhcCC-----CCCCCHHHHHHHHHHH
Q 019995 11 ALPSVGMVIVLLAQVSNMEVIKAAMSKGIN--KYVIIVYSDALSSLFFLFCSFLFHRSE-----RPQLTFSILCSFFLLS 83 (332)
Q Consensus 11 ~~~~l~li~~~~iwg~~~v~~K~~~~~~~~--p~~~~~~R~~~a~l~ll~~~~~~~~~~-----~~~~~~~~~~~~~~~g 83 (332)
..+.++.+.+++.|+...+..|...+..-+ ......+-..++.+.+.......+... ....+.+.|..++.+|
T Consensus 142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 221 (299)
T PRK11453 142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA 221 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence 357788899999999999999986543212 223334444444433333322222211 1134567788888899
Q ss_pred HHH-HHHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeee
Q 019995 84 VFG-CSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (332)
Q Consensus 84 l~g-~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~ 153 (332)
+++ .+.+.+++.++++.++++++.+.++.|++..++++++++|+++..+ ++|.++.++|+.+..
T Consensus 222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~------~iG~~lI~~gv~l~~ 286 (299)
T PRK11453 222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQ------FLGAVLIMAGLYINV 286 (299)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHH------HHHHHHHHHHHHHHh
Confidence 998 8899999999999999999999999999999999999999998764 999999999997643
No 35
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.48 E-value=4.9e-07 Score=85.03 Aligned_cols=137 Identities=17% Similarity=0.143 Sum_probs=102.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCC---------CCHHHHHH-H
Q 019995 11 ALPSVGMVIVLLAQVSNMEVIKAAMSK-GINKYVIIVYSDALSSLFFLFCSFLFHRSERPQ---------LTFSILCS-F 79 (332)
Q Consensus 11 ~~~~l~li~~~~iwg~~~v~~K~~~~~-~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~---------~~~~~~~~-~ 79 (332)
..+.+..+++++.|+...+..|...++ +.||..+..+...++.+.++|+....+...... ........ .
T Consensus 144 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (302)
T TIGR00817 144 WAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVS 223 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHH
Confidence 457788889999999999999997652 489999999999999999999876543111000 00011111 2
Q ss_pred HHHHHHH-HHHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeee
Q 019995 80 FLLSVFG-CSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (332)
Q Consensus 80 ~~~gl~g-~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~ 153 (332)
+..+... ...+.+++.++++++|+.+++..+..|+++.++++++++|+++.++ ++|.++.+.|+.+..
T Consensus 224 ~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~------~~G~~lil~Gv~l~~ 292 (302)
T TIGR00817 224 LVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQ------VFGTGIAIAGVFLYS 292 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhH------HHHHHHHHHHHHHHH
Confidence 2222222 3344677789999999999999999999999999999999998765 999999999997643
No 36
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.41 E-value=1.4e-05 Score=73.58 Aligned_cols=213 Identities=11% Similarity=0.014 Sum_probs=136.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccChhhHHHhh-hhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceee
Q 019995 74 SILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAML-NLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVV 152 (332)
Q Consensus 74 ~~~~~~~~~gl~g~~~~~~~~~gl~~t~a~~asii~-~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll 152 (332)
+.+...++.|++....|...+.+.++.+.+.+-=+. ..+=+.+.+++.++++|.-+.+++ ..-.+++++-++|+.+.
T Consensus 43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~--~~G~~Al~liiiGv~lt 120 (269)
T PF06800_consen 43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQK--IIGFLALVLIIIGVILT 120 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchH--HHHHHHHHHHHHHHHHh
Confidence 777778888888899999999999999888765444 456677888999999998776552 12345677788888775
Q ss_pred eecCCCCCcCCCCCCCCCCcccCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHH-HHHH
Q 019995 153 TFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILS-TAFA 231 (332)
Q Consensus 153 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~L~aa~~~A~~~vl~~~~~~~~~~~~~~~~~~~~~g~i~l-~~~~ 231 (332)
+..+.++ ++.+.+.+...|...++++++.|-.|.++.|- .+. |+..+..-|. +|.... +++.
T Consensus 121 s~~~~~~-------------~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~--~~~-~~~~~~lPqa-iGm~i~a~i~~ 183 (269)
T PF06800_consen 121 SYQDKKS-------------DKSSSKSNMKKGILALLISTIGYWIYSVIPKA--FHV-SGWSAFLPQA-IGMLIGAFIFN 183 (269)
T ss_pred ccccccc-------------cccccccchhhHHHHHHHHHHHHHHHHHHHHh--cCC-ChhHhHHHHH-HHHHHHHHHHh
Confidence 5322111 00111234467999999999999999998553 344 4777766665 333332 2333
Q ss_pred HHHcCCCCCccccchhhHHHHHHHhhHHHHHHHHHHhccc-h--hhhhhchHHHHHHHHHHHHhCCccccchhhhhhhee
Q 019995 232 LIVVSEPSDWKLGLDIGLVAVLYSVSSYWHWVSSWLVHMV-P--VENWTSLCINVQALGHCLLYCHGCRHCRRRFLSWKV 308 (332)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~l~~~gt~i~~~l~~~~l~~~-~--~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~~~~~~~ 308 (332)
.+.+.+.. .+..+......+++ +++...+..+.++. . .=.++-+.++++.+.|.++|||+=+.-+.+...-|.
T Consensus 184 ~~~~~~~~-~k~~~~nil~G~~w---~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~ 259 (269)
T PF06800_consen 184 LFSKKPFF-EKKSWKNILTGLIW---GIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGL 259 (269)
T ss_pred hccccccc-ccchHHhhHHHHHH---HHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHH
Confidence 22222111 11111122223333 35666677777777 4 335555789999999999999987665555444444
Q ss_pred e
Q 019995 309 L 309 (332)
Q Consensus 309 ~ 309 (332)
+
T Consensus 260 ~ 260 (269)
T PF06800_consen 260 I 260 (269)
T ss_pred H
Confidence 3
No 37
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.40 E-value=4.8e-05 Score=70.87 Aligned_cols=284 Identities=16% Similarity=0.082 Sum_probs=174.5
Q ss_pred CcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHH--HHHHHHHHHHHHHHHHHhhcC-CCCCCCHHHHHHH
Q 019995 3 VDMGSMRAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVII--VYSDALSSLFFLFCSFLFHRS-ERPQLTFSILCSF 79 (332)
Q Consensus 3 ~~~~~~~~~~~~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~--~~R~~~a~l~ll~~~~~~~~~-~~~~~~~~~~~~~ 79 (332)
.+..+.++.++....+.-++.=-..-+.-|.++...--|..+. .++.+.+.+.+...-.. |- +-++++++..++.
T Consensus 3 ~~~~~~~~~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~--~lv~~~~l~~~~~kk~ 80 (314)
T KOG1444|consen 3 SDEGSKKQSSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRL--GLVNFRPLDLRTAKKW 80 (314)
T ss_pred ccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHh--ceeecCCcChHHHHHH
Confidence 3444333333444444333333344555787776532333333 47888777766533211 11 1256778888888
Q ss_pred HHHHHHHHHHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeeeecCCCC
Q 019995 80 FLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPP 159 (332)
Q Consensus 80 ~~~gl~g~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~~ 159 (332)
+...++..+..+.-..+++|.+...-+++-+.+|+++++...++++.+.+++ -+..+....+|..+.... +
T Consensus 81 ~P~~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~------v~~Sv~~m~~~s~~~~~~---d 151 (314)
T KOG1444|consen 81 FPVSLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNK------VWASVFAMIIGSVAAAFT---D 151 (314)
T ss_pred ccHHHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhh------HHHHHHHHHHHHHhhccc---c
Confidence 8999988888888889999999999999999999999999999988666554 466677777776554311 1
Q ss_pred CcCCCCCCCCCCcccCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhHHHHHHHHHHHHHHHHHHHHHHcCC-
Q 019995 160 LIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFA-AVLIIMFYLFFFNTILSTAFALIVVSE- 237 (332)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~G~~l~L~aa~~~A~~~vl~~~~~~~~~-~~~~~~~~~~~~g~i~l~~~~~~~~~~- 237 (332)
. .-...|..+++...++-+.+.+..||..+... +...++++..+.....+.....++++-
T Consensus 152 ~------------------sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~ 213 (314)
T KOG1444|consen 152 L------------------SFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELD 213 (314)
T ss_pred c------------------eecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchH
Confidence 1 01134889999999999999999888754321 355678899999888888887666541
Q ss_pred -----CCCccccchhhHHHHHHHh---hHHHHHHHHHHhccc-h--hhhhhchHHHHHHHHHHHHhCCccccchhh---h
Q 019995 238 -----PSDWKLGLDIGLVAVLYSV---SSYWHWVSSWLVHMV-P--VENWTSLCINVQALGHCLLYCHGCRHCRRR---F 303 (332)
Q Consensus 238 -----~~~~~~~~~~~~~~l~~~g---t~i~~~l~~~~l~~~-~--~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~---~ 303 (332)
.+.|... ..+..+...| -++.|. -.|+.+.. + .++.....-..+.+.+..+.|++.++.+-. +
T Consensus 214 ~l~~~~~~~~~~--~~~~~~~lScv~gf~isy~-s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~ 290 (314)
T KOG1444|consen 214 ALSLNFDNWSDS--SVLVVMLLSCVMGFGISYT-SFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLV 290 (314)
T ss_pred HHHhhcccccch--hHHHHHHHHHHHHHHHHHH-HHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHH
Confidence 1112211 1234444444 333333 33555555 3 445554444555666666666666664443 3
Q ss_pred -hhheee--eeeeccCCc
Q 019995 304 -LSWKVL--LINFFSNDF 318 (332)
Q Consensus 304 -~~~~~~--~~~~~~~~~ 318 (332)
..+||+ ..+..|||+
T Consensus 291 ~~~ggv~Y~~~~~~~k~~ 308 (314)
T KOG1444|consen 291 GFFGGVLYSYATFRKKKQ 308 (314)
T ss_pred HhhhhhHHhhhhhhhccC
Confidence 344454 344444443
No 38
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.38 E-value=7.4e-06 Score=68.81 Aligned_cols=132 Identities=17% Similarity=0.259 Sum_probs=108.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhC------CCChHHHHHHHHHHHHHHHHHHHHHhhcCCC-C---CC-------CHHHH
Q 019995 14 SVGMVIVLLAQVSNMEVIKAAMSK------GINKYVIIVYSDALSSLFFLFCSFLFHRSER-P---QL-------TFSIL 76 (332)
Q Consensus 14 ~l~li~~~~iwg~~~v~~K~~~~~------~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~-~---~~-------~~~~~ 76 (332)
....+.+.+.-+...+..|..++. ..++.....+-...+.+++.|.....+.... + .. ..+.+
T Consensus 2 ~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 81 (153)
T PF03151_consen 2 FILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFI 81 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHH
Confidence 456778888899999999998887 6899999999999999999998777554321 0 00 12334
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheecccee
Q 019995 77 CSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFV 151 (332)
Q Consensus 77 ~~~~~~gl~g~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~l 151 (332)
..++..|+++...+...+..+++++|...++....-.+.+.++++++++|+++.+ +++|+++++.|+..
T Consensus 82 ~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~------~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 82 FLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPL------QIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHH------HHHHHHHHHHHHhe
Confidence 4555666677888999999999999999999999999999999999999999866 49999999999864
No 39
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.30 E-value=1.1e-05 Score=77.74 Aligned_cols=135 Identities=17% Similarity=0.121 Sum_probs=98.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhC------CCChHHHHHHHHHHHHHHHHHHHHHhhcCCC-----------CCCCH
Q 019995 11 ALPSVGMVIVLLAQVSNMEVIKAAMSK------GINKYVIIVYSDALSSLFFLFCSFLFHRSER-----------PQLTF 73 (332)
Q Consensus 11 ~~~~l~li~~~~iwg~~~v~~K~~~~~------~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~-----------~~~~~ 73 (332)
..+.++.+++++.|+...+..|..++. +.++.....+-..+++++++|+....+.... .....
T Consensus 193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~ 272 (350)
T PTZ00343 193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTK 272 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccch
Confidence 457888999999999999999998764 2567767777788999999988764322100 00011
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheecccee
Q 019995 74 SILCSFFLLS-VFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFV 151 (332)
Q Consensus 74 ~~~~~~~~~g-l~g~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~l 151 (332)
......+..+ +.....+.+-+++++++++.++++..++-|+++.++++++++|+++..+ ++|.++.+.|+.+
T Consensus 273 ~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~------~iG~~lii~Gv~l 345 (350)
T PTZ00343 273 GIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLG------YLGMAVAILGALL 345 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHh------HHHHHHHHHHHHH
Confidence 1111112222 2224444555579999999999999999999999999999999998764 9999999999865
No 40
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=98.22 E-value=5.2e-06 Score=74.88 Aligned_cols=171 Identities=17% Similarity=0.168 Sum_probs=121.0
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccChhhHHHhhhhhHHHHHHH
Q 019995 40 NKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVL 119 (332)
Q Consensus 40 ~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~il 119 (332)
.|..=.+.-+..-+++-.|....+ ++ .++ ..|...+++|+...-.+++...|.|||+-+.+.++-.-.-..+.++
T Consensus 47 ~Pt~QtFl~Y~LLalVY~~~~~fR-~~---~~~-~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~l 121 (336)
T KOG2766|consen 47 APTSQTFLNYVLLALVYGPIMLFR-RK---YIK-AKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVL 121 (336)
T ss_pred CccHHHHHHHHHHHHHHhhHHHhh-hH---HHH-HHHHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHH
Confidence 344445555555555555555442 22 122 2344577888888667777888999999998888877666667889
Q ss_pred HHHHHhhccccccccccchhhhhhheeccceeeeecCCCCCcCCCCCCCCCCcccCCCCccchhHHHHHHHHHHHHHHHH
Q 019995 120 AIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWF 199 (332)
Q Consensus 120 a~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~L~aa~~~A~~~ 199 (332)
+|+++|.|-+ +.|+.|+.+|+.|+..+++.+ .+ . ++..++.+...||.+.+.+|.+||..+
T Consensus 122 sw~fLktrYr------lmki~gV~iCi~GvvmvV~sD---V~--------a--gd~aggsnp~~GD~lvi~GATlYaVSN 182 (336)
T KOG2766|consen 122 SWFFLKTRYR------LMKISGVVICIVGVVMVVFSD---VH--------A--GDRAGGSNPVKGDFLVIAGATLYAVSN 182 (336)
T ss_pred HHHHHHHHHh------hheeeeEEeEecceEEEEEee---ec--------c--ccccCCCCCccCcEEEEecceeeeecc
Confidence 9999998754 347999999999999887542 11 0 112234455789999999999999999
Q ss_pred HHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHcC
Q 019995 200 ILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVS 236 (332)
Q Consensus 200 vl~~~~~~~~~~~~~~~~~~~~~g~i~l~~~~~~~~~ 236 (332)
+....+.|+.| ....+....++|++...+= .+++.
T Consensus 183 v~EEflvkn~d-~~elm~~lgLfGaIIsaIQ-~i~~~ 217 (336)
T KOG2766|consen 183 VSEEFLVKNAD-RVELMGFLGLFGAIISAIQ-FIFER 217 (336)
T ss_pred ccHHHHHhcCc-HHHHHHHHHHHHHHHHHHH-Hhhhc
Confidence 99888899985 5666677778898887665 44444
No 41
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.21 E-value=2.3e-05 Score=72.00 Aligned_cols=132 Identities=14% Similarity=0.165 Sum_probs=102.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHH-HHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH-HH
Q 019995 11 ALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIV-YSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CS 88 (332)
Q Consensus 11 ~~~~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~~-~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g-~~ 88 (332)
..+.+..+.+.+.|+...+..|... ..++..... +.+..+..+..+.... .+. ...+.+++......|+++ ..
T Consensus 153 ~~g~~~~l~a~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~g~~~~~i 227 (292)
T COG0697 153 LLGLLLALAAALLWALYTALVKRLS--RLGPVTLALLLQLLLALLLLLLFFLS-GFG--APILSRAWLLLLYLGVFSTGL 227 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHHhc-ccc--ccCCHHHHHHHHHHHHHHHHH
Confidence 4688888999999999999999765 367777776 4444223333222211 111 234567788888999998 57
Q ss_pred HHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeee
Q 019995 89 SQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (332)
Q Consensus 89 ~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~ 153 (332)
.+.+++.+++..+++.++.+.++.|++..++++++++|+++.++ ++|.++.+.|+.+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~------~~G~~li~~g~~l~~ 286 (292)
T COG0697 228 AYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQ------LLGAALVVLGVLLAS 286 (292)
T ss_pred HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999998764 899999999987643
No 42
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.21 E-value=1.2e-05 Score=75.36 Aligned_cols=132 Identities=15% Similarity=0.063 Sum_probs=99.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH----HHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH
Q 019995 11 ALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDA----LSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG 86 (332)
Q Consensus 11 ~~~~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~----~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g 86 (332)
.|+....+++.+.++...+..|.. +.||...++.... .+.++..++ ++.++. +.+.....++.|++.
T Consensus 151 ~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~Gi~~ 221 (290)
T TIGR00776 151 KKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH-----ILAKPL-KKYAILLNILPGLMW 221 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH-----hcccch-HHHHHHHHHHHHHHH
Confidence 678999999999999999999964 3799988655554 444333332 111222 333444455688877
Q ss_pred HHHHHHHHHhhc-ccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeee
Q 019995 87 CSSQIFSFVGIQ-YSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (332)
Q Consensus 87 ~~~~~~~~~gl~-~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~ 153 (332)
...+.+|+.+.+ +.+++.++++.+..|+...+.+.+++||+.++++. +.-.+|.++-+.|+.++.
T Consensus 222 ~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~--~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 222 GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREM--IAISVGIILIIIAANILG 287 (290)
T ss_pred HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCccee--ehhHHHHHHHHHHHHHHh
Confidence 788899999999 99999999999999999999999999999988862 112388888888886643
No 43
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=98.19 E-value=0.00018 Score=66.60 Aligned_cols=259 Identities=15% Similarity=0.109 Sum_probs=157.6
Q ss_pred HHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCC---CCCCCHHHHH-HHHHHHHHHHHHHHHHHHhhcc
Q 019995 24 QVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSE---RPQLTFSILC-SFFLLSVFGCSSQIFSFVGIQY 99 (332)
Q Consensus 24 wg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~---~~~~~~~~~~-~~~~~gl~g~~~~~~~~~gl~~ 99 (332)
-|..+...+.-.+-+ -|..++.++...=.++-.......+++. |...++++-. +....|+..+....+-.++++|
T Consensus 29 i~Ltf~~~~~~~~f~-fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~y 107 (349)
T KOG1443|consen 29 IGLTFYFKWLTKNFH-FPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEY 107 (349)
T ss_pred HHHHHHhhhhhcCcC-CchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeee
Confidence 355666666554433 4566666555443333222222222221 2245555443 4567777778888999999999
Q ss_pred cChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeeeecCCCCCcCCCCCCCCCCcccCCCCc
Q 019995 100 SSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQL 179 (332)
Q Consensus 100 t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~ 179 (332)
++.+.=+..=+++++|+.+.+.++.-||.+++ -..-+.+-..|+++.+ .+..+ .
T Consensus 108 VtlSlYTM~KSSsi~FIllFs~if~lEk~~w~------L~l~v~lI~~Glflft-~KsTq-------------------f 161 (349)
T KOG1443|consen 108 VTLSLYTMTKSSSILFILLFSLIFKLEKFRWA------LVLIVLLIAVGLFLFT-YKSTQ-------------------F 161 (349)
T ss_pred eeeeeeeeccccHHHHHHHHHHHHHhHHHHHH------HHHHHHHHhhheeEEE-ecccc-------------------e
Confidence 99999999999999999999999999998764 2444455556776665 33221 1
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhcc----hhHHHHHHHHHHHHHHHHHHHHHHcCCCC-----Cccc-cchhhH
Q 019995 180 SWILGGFFLAAEAFMNSAWFILQALILRKFA----AVLIIMFYLFFFNTILSTAFALIVVSEPS-----DWKL-GLDIGL 249 (332)
Q Consensus 180 ~~~~G~~l~L~aa~~~A~~~vl~~~~~~~~~----~~~~~~~~~~~~g~i~l~~~~~~~~~~~~-----~~~~-~~~~~~ 249 (332)
...|-.+.+.|+++-++-=.+.++.+++.| +|+.......-.=.+.+++..+.+|++.. .|.. .+...+
T Consensus 162 -~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~ 240 (349)
T KOG1443|consen 162 -NIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLIL 240 (349)
T ss_pred -eehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHH
Confidence 156878888888776665555566666543 45555554444555666777777887421 2222 121233
Q ss_pred HHH--HHHhhHHHHHHHH---HHhccch---hhhhhchHHHHHHHHHHHHhCCccccchhh---hhhheeee
Q 019995 250 VAV--LYSVSSYWHWVSS---WLVHMVP---VENWTSLCINVQALGHCLLYCHGCRHCRRR---FLSWKVLL 310 (332)
Q Consensus 250 ~~l--~~~gt~i~~~l~~---~~l~~~~---~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~---~~~~~~~~ 310 (332)
..+ +.+|...++.+-. ...++.+ .+++.-.--+...++|..+.+|.++.++-+ .-..|+..
T Consensus 241 rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~ 312 (349)
T KOG1443|consen 241 RVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILL 312 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHH
Confidence 333 2333444543332 2334443 666666777889999999999999965544 24445543
No 44
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.18 E-value=1.5e-05 Score=74.90 Aligned_cols=129 Identities=9% Similarity=-0.004 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCC-CChHHHHHHHHHHHHHHHHHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHH
Q 019995 16 GMVIVLLAQVSNMEVIKAAMSKG-INKYVIIVYSDALSSLFFLFCSFLFHRSE--RPQLTFSILCSFFLLSVFGCSSQIF 92 (332)
Q Consensus 16 ~li~~~~iwg~~~v~~K~~~~~~-~~p~~~~~~R~~~a~l~ll~~~~~~~~~~--~~~~~~~~~~~~~~~gl~g~~~~~~ 92 (332)
..+.+++.|+...+..|...+++ .++.....+-..++.+.+.+.. .... ....+...+......|+...+.+.+
T Consensus 153 ~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~t~i~~~~ 229 (296)
T PRK15430 153 IALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIA---DSSTSHMGQNPMSLNLLLIAAGIVTTVPLLC 229 (296)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHc---cCCcccccCCcHHHHHHHHHHHHHHHHHHHH
Confidence 45677899999999998753221 1223333444444444332221 1111 0111222233344455545789999
Q ss_pred HHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeee
Q 019995 93 SFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (332)
Q Consensus 93 ~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~ 153 (332)
++.++++.+++.++.+.++.|++..++++++++|+++..+ ++|.++.+.|+.++.
T Consensus 230 ~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~------~~G~~lI~~~~~v~~ 284 (296)
T PRK15430 230 FTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADK------MVTFAFIWVALAIFV 284 (296)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHH------HHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998764 899998888876654
No 45
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.14 E-value=4.3e-06 Score=67.19 Aligned_cols=68 Identities=16% Similarity=0.146 Sum_probs=60.0
Q ss_pred HHHHHHH-HHHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeee
Q 019995 80 FLLSVFG-CSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (332)
Q Consensus 80 ~~~gl~g-~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~ 153 (332)
...++.+ ...+.++..++++.|.+.|..+.++.|+++.+++++++|||++.+ |++|+++.++|+.++.
T Consensus 40 ~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~------~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 40 LGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPR------HWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHh
Confidence 3444466 788999999999999999999999999999999999999999876 4999999999997653
No 46
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=97.99 E-value=0.00012 Score=61.30 Aligned_cols=118 Identities=12% Similarity=0.125 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh------cchhHHHHHHHHHHHHHHHHHHHHHHcCCCCC--cc-c-----c-chhh
Q 019995 184 GGFFLAAEAFMNSAWFILQALILRK------FAAVLIIMFYLFFFNTILSTAFALIVVSEPSD--WK-L-----G-LDIG 248 (332)
Q Consensus 184 G~~l~L~aa~~~A~~~vl~~~~~~~------~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~--~~-~-----~-~~~~ 248 (332)
|.++.+.|.++.|++.++.|+..++ ..++..+..+....+.+.+++.....|+.... .. . . ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 5678999999999999999998666 23788899999999999999998877664211 10 0 0 1122
Q ss_pred HHHHHHHh--hHHHHHHHHHHhccc-h--hhhhhchHHHHHHHHHHHHhCCccccchh
Q 019995 249 LVAVLYSV--SSYWHWVSSWLVHMV-P--VENWTSLCINVQALGHCLLYCHGCRHCRR 301 (332)
Q Consensus 249 ~~~l~~~g--t~i~~~l~~~~l~~~-~--~s~~~~l~Pv~a~il~~~~LgE~~~~~~~ 301 (332)
+..++..| ...-.....+.+++. | .++...+-.+...+.|++++||+++..+-
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~ 138 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQI 138 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHH
Confidence 33333444 444456666888888 7 88888899999999999999999886543
No 47
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=97.96 E-value=3.9e-05 Score=66.85 Aligned_cols=103 Identities=21% Similarity=0.334 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeeeecCCCCC
Q 019995 81 LLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPL 160 (332)
Q Consensus 81 ~~gl~g~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~~~ 160 (332)
...++.++.++.|..+++..+++.++.+..+...|+.++++++++||+... |++..++++.|++.+...+
T Consensus 58 PF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~------kIlaailAI~GiVmiay~D---- 127 (290)
T KOG4314|consen 58 PFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGF------KILAAILAIGGIVMIAYAD---- 127 (290)
T ss_pred ceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhh------hHHHHHHHhCcEEEEEecc----
Confidence 344555788999999999999999999999999999999999999998754 6999999999998876321
Q ss_pred cCCCCCCCCCCcccCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 019995 161 IGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRK 208 (332)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~G~~l~L~aa~~~A~~~vl~~~~~~~ 208 (332)
..+.++..|+.++.++|+.-|+|-++-|+...+
T Consensus 128 ---------------N~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGn 160 (290)
T KOG4314|consen 128 ---------------NEHADEIIGIACAVGSAFMAALYKVLFKMFIGN 160 (290)
T ss_pred ---------------chhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 123456899999999999999999999987644
No 48
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=97.92 E-value=9.5e-05 Score=67.73 Aligned_cols=126 Identities=10% Similarity=0.004 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHcCCC---CCcccc-chhhHHHHHHHh--h
Q 019995 184 GGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEP---SDWKLG-LDIGLVAVLYSV--S 257 (332)
Q Consensus 184 G~~l~L~aa~~~A~~~vl~~~~~~~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~---~~~~~~-~~~~~~~l~~~g--t 257 (332)
|..+.++++++|+...+..|. ..+. +|..+.++.++++++.+.+......+.. ..++.. ....+..+...| .
T Consensus 3 g~~~~i~a~~~wg~~~~~~k~-~~~~-~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 80 (256)
T TIGR00688 3 GIIVSLLASFLFGYMYYYSKL-LKPL-PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLI 80 (256)
T ss_pred cHHHHHHHHHHHHHHHHHHHH-hccC-CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHH
Confidence 778999999999999999886 4567 5899999999999888766543322100 001100 111122233334 5
Q ss_pred HHHHHHHHHHhccc-h--hhhhhchHHHHHHHHHHHHhCCccccchhh---hhhheeeee
Q 019995 258 SYWHWVSSWLVHMV-P--VENWTSLCINVQALGHCLLYCHGCRHCRRR---FLSWKVLLI 311 (332)
Q Consensus 258 ~i~~~l~~~~l~~~-~--~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~---~~~~~~~~~ 311 (332)
.+.+.++++++++. + ++...+..|++++++++++++|+++..+-. ...-||+++
T Consensus 81 ~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li 140 (256)
T TIGR00688 81 GFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISN 140 (256)
T ss_pred HHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 67889999999999 4 888899999999999999999999987666 244565543
No 49
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=97.89 E-value=0.00032 Score=64.36 Aligned_cols=134 Identities=13% Similarity=0.138 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeeeecCCCCC
Q 019995 81 LLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPL 160 (332)
Q Consensus 81 ~~gl~g~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~~~ 160 (332)
.-+++....-.++|.|+.+|+++.-..+-...-+|+.+++..+++.+++.+ ||+|+....+|++++...+ .
T Consensus 91 ~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~------qWl~i~fv~lGlviVg~~d---~ 161 (372)
T KOG3912|consen 91 PPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGR------QWLGILFVSLGLVIVGSLD---V 161 (372)
T ss_pred ChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchh------hHHHHHHHHhhhheeeeee---c
Confidence 355666777778889999999999888888999999999999999888766 4899999999998875321 1
Q ss_pred cCCCCCCCCCCcccCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhHHHHHHHHHHHHHHHHHHH
Q 019995 161 IGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFA-AVLIIMFYLFFFNTILSTAFA 231 (332)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~G~~l~L~aa~~~A~~~vl~~~~~~~~~-~~~~~~~~~~~~g~i~l~~~~ 231 (332)
...++ ..++..+-+.|+++.++|=+.-|..+++-.|.+++.+ +|.....|+.++|.+.+-.++
T Consensus 162 ~~~~~--------p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~ 225 (372)
T KOG3912|consen 162 HLVTD--------PYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLA 225 (372)
T ss_pred ccccC--------CccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHH
Confidence 11100 0112234579999999999999999999999877753 689999999999965554433
No 50
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=97.80 E-value=0.0067 Score=56.42 Aligned_cols=239 Identities=15% Similarity=0.165 Sum_probs=154.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccChhhHHHhhh--hhHHHHH
Q 019995 40 NKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLN--LIPAFTF 117 (332)
Q Consensus 40 ~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~~~~gl~~t~a~~asii~~--~~Pv~~~ 117 (332)
+|..+.+.+-+.+.+.=... +..+|.. ....+.|...-..++-+...-.|.|.+++|.+=-.-.+-=+ ..|+ .
T Consensus 50 ~~~fL~~~q~l~~~~~s~~~--l~~~k~~-~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPV--m 124 (327)
T KOG1581|consen 50 HSLFLVFCQRLVALLVSYAM--LKWWKKE-LSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPV--M 124 (327)
T ss_pred ccHHHHHHHHHHHHHHHHHH--Hhccccc-CCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHH--H
Confidence 44555555655555543322 2222222 22234466677888888899999999999986444333322 4454 4
Q ss_pred HHHHHHHhhccccccccccchhhhhhheeccceeeeecCCCCCcCCCCCCCCCCcccCCCCccchhHHHHHHHHHHHHHH
Q 019995 118 VLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSA 197 (332)
Q Consensus 118 ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~L~aa~~~A~ 197 (332)
+...++.+.|.+. .|++..++.-.|+.+..+.+..+. . ...++.+...|..++...-..=+.
T Consensus 125 lmg~Lvy~~ky~~------~eYl~~~LIs~GvsiF~l~~~s~s-~-----------~~~g~~ns~~G~~Ll~~~L~fDgf 186 (327)
T KOG1581|consen 125 LMGTLVYGRKYSS------FEYLVAFLISLGVSIFSLFPNSDS-S-----------SKSGRENSPIGILLLFGYLLFDGF 186 (327)
T ss_pred HHHHHHhcCccCc------HHHHHHHHHHhheeeEEEecCCCC-c-----------cccCCCCchHhHHHHHHHHHHHhh
Confidence 5667777766654 468888888889888765533220 0 012234457899888888887777
Q ss_pred HHHHHHHHHHhcc-hhHHHHHHHHHHHHHHHHHHHHHHcCC-CCCc---cccchhhHHHHHHHh-hHHHHHHHHHHhccc
Q 019995 198 WFILQALILRKFA-AVLIIMFYLFFFNTILSTAFALIVVSE-PSDW---KLGLDIGLVAVLYSV-SSYWHWVSSWLVHMV 271 (332)
Q Consensus 198 ~~vl~~~~~~~~~-~~~~~~~~~~~~g~i~l~~~~~~~~~~-~~~~---~~~~~~~~~~l~~~g-t~i~~~l~~~~l~~~ 271 (332)
-+..|+++.++.. ++..+++...+++.+...... +..+. ..+. ..+++..+=-++|.- .++++...++-+++-
T Consensus 187 Tn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~l-i~qg~~~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~F 265 (327)
T KOG1581|consen 187 TNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYL-ILQGHLLPAVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERF 265 (327)
T ss_pred HHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhh-hcCCCCchHHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhc
Confidence 7888999877643 677888888888888887663 32221 1111 122332222334444 888888888999999
Q ss_pred -h--hhhhhchHHHHHHHHHHHHhCCccccchhh
Q 019995 272 -P--VENWTSLCINVQALGHCLLYCHGCRHCRRR 302 (332)
Q Consensus 272 -~--~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~ 302 (332)
| .+..+..-=++++.++.+.+|++++..+-.
T Consensus 266 Gslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~ 299 (327)
T KOG1581|consen 266 GSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWL 299 (327)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCCccchhhcc
Confidence 8 667777788999999999999999985544
No 51
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.77 E-value=0.0034 Score=60.11 Aligned_cols=273 Identities=12% Similarity=0.042 Sum_probs=152.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHH--HHhhcC---CCCCCCHHHHHHHHHHHH
Q 019995 10 AALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCS--FLFHRS---ERPQLTFSILCSFFLLSV 84 (332)
Q Consensus 10 ~~~~~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~--~~~~~~---~~~~~~~~~~~~~~~~gl 84 (332)
-..+++..++++++||+.++-.|.. +. .|=..+=..-..++.+ +.|+. .+..+. .....+.+.+...++-|+
T Consensus 5 ~~~G~~~~~i~~~~~GS~~~p~K~~-k~-w~wE~~W~v~gi~~wl-~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G~ 81 (345)
T PRK13499 5 IILGIIWHLIGGASSGSFYAPFKKV-KK-WSWETMWSVGGIFSWL-ILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFGA 81 (345)
T ss_pred hHHHHHHHHHHHHHhhccccccccc-CC-CchhHHHHHHHHHHHH-HHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHHH
Confidence 4568889999999999999999983 32 4422220011111111 11211 111111 012345666777777888
Q ss_pred HHHHHHHHHHHhhcccChhhHHHh-hhhhHHHHHHHHHHHHhhcc---ccccccccchhhhhhheeccceeeeecCCCCC
Q 019995 85 FGCSSQIFSFVGIQYSSPTLSTAM-LNLIPAFTFVLAIIFRLEKL---NWENKSSQAKSLGTFASIGGAFVVTFYKGPPL 160 (332)
Q Consensus 85 ~g~~~~~~~~~gl~~t~a~~asii-~~~~Pv~~~ila~l~~~E~l---~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~~~ 160 (332)
+-...|..++.++++...+.+--+ ..++=+...++..++++|.- +..+ ...-.+|+++.++|+.+...- +..
T Consensus 82 ~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~--g~~~~~gv~liliGi~l~s~A-g~~- 157 (345)
T PRK13499 82 LWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNG--GRMTLLGVLVALIGVAIVGRA-GQL- 157 (345)
T ss_pred HHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccch--HHHHHHHHHHHHHHHHHHHHh-hhh-
Confidence 888999999999999998887555 46888888888889988754 3332 234688999999999876521 100
Q ss_pred cCCCCCCCCCCcc-cC-CCCccchhHHHHHHHHHHHHHHHH-------HHHHHHHHhcchhHHHHHHHHH---HHHHHHH
Q 019995 161 IGELSHSGSPRRL-LL-SPQLSWILGGFFLAAEAFMNSAWF-------ILQALILRKFAAVLIIMFYLFF---FNTILST 228 (332)
Q Consensus 161 ~~~~~~~~~~~~~-~~-~~~~~~~~G~~l~L~aa~~~A~~~-------vl~~~~~~~~~~~~~~~~~~~~---~g~i~l~ 228 (332)
.++++ ++ ..+.+...|.+++++|.+.+++|. ...+...+...++.....-|.. .|+...-
T Consensus 158 --------k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n 229 (345)
T PRK13499 158 --------KERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITN 229 (345)
T ss_pred --------cccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHH
Confidence 00100 00 123455789999999999999999 4433221111134444444443 4444332
Q ss_pred -HHHHHH---cCCCC---Ccccc----chhhHHHHHHHh--hHHHHHHHHHHhccc-h---hh---hhhchHHHHHHHHH
Q 019995 229 -AFALIV---VSEPS---DWKLG----LDIGLVAVLYSV--SSYWHWVSSWLVHMV-P---VE---NWTSLCINVQALGH 288 (332)
Q Consensus 229 -~~~~~~---~~~~~---~~~~~----~~~~~~~l~~~g--t~i~~~l~~~~l~~~-~---~s---~~~~l~Pv~a~il~ 288 (332)
++.... +++.+ +.... ......+. ..| =.+++..|..+-++. . .. ...-+.-+++.++|
T Consensus 230 ~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~-l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwG 308 (345)
T PRK13499 230 LGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSA-LAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWG 308 (345)
T ss_pred HHHHHHHHhhCCCcccchhccccchhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhh
Confidence 222211 11111 11100 11111111 111 234455566666666 2 22 22245568999999
Q ss_pred HHHhCCccccc
Q 019995 289 CLLYCHGCRHC 299 (332)
Q Consensus 289 ~~~LgE~~~~~ 299 (332)
. ++||.=+-+
T Consensus 309 i-~lkE~K~a~ 318 (345)
T PRK13499 309 L-VLKEWKGAS 318 (345)
T ss_pred h-hhhhccCCC
Confidence 8 599987743
No 52
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.61 E-value=0.00058 Score=56.33 Aligned_cols=116 Identities=17% Similarity=0.223 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH-HHHHH
Q 019995 13 PSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CSSQI 91 (332)
Q Consensus 13 ~~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g-~~~~~ 91 (332)
+++.+++..++=+...++-|.++++ .+...... + ....+.. . . .+ ...+..|+.. .+.+.
T Consensus 3 ~~~~i~~sv~l~~~gQl~~K~g~~~-~g~~~~~~-~-~~~~~~~-----~--~-----~p----~~~i~lgl~~~~la~~ 63 (129)
T PRK02971 3 GYLWGLASVLLASVAQLSLKWGMSR-LPLLSHAW-D-FIAALLA-----F--G-----LA----LRAVLLGLAGYALSML 63 (129)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhh-CCCccchh-H-HHHHHHH-----H--h-----cc----HHHHHHHHHHHHHHHH
Confidence 5667777777778899999999865 44333211 1 1110000 0 0 01 1246778887 89999
Q ss_pred HHHHhhcccChhhHHHhhhhhHHHHHHHHHH--HHhhccccccccccchhhhhhheeccceeee
Q 019995 92 FSFVGIQYSSPTLSTAMLNLIPAFTFVLAII--FRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (332)
Q Consensus 92 ~~~~gl~~t~a~~asii~~~~Pv~~~ila~l--~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~ 153 (332)
++..+++..+.+.|.-+.+..|.++.+.++. ++||+++.+ |++|+++.++|+.++.
T Consensus 64 ~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~------~~iGi~lIi~GV~lv~ 121 (129)
T PRK02971 64 CWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLK------KTLGVACIMLGVWLIN 121 (129)
T ss_pred HHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHhc
Confidence 9999999999999999999999888888874 799999876 4999999999998865
No 53
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.54 E-value=0.0039 Score=58.84 Aligned_cols=68 Identities=24% Similarity=0.384 Sum_probs=57.5
Q ss_pred HHHHH-HHHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeeeec
Q 019995 82 LSVFG-CSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFY 155 (332)
Q Consensus 82 ~gl~g-~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~ 155 (332)
.|+.- ..+..+.+.++.+.|++..+=+....-++.++++..++|||+++++ +.|.++++.|..+++..
T Consensus 55 ~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~------~~G~~l~i~G~~liv~~ 123 (300)
T PF05653_consen 55 IGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRD------IVGCALIILGSVLIVIF 123 (300)
T ss_pred HHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhH------HhhHHHHHhhheeeEEe
Confidence 34443 5666788889999999999988999999999999999999998775 89999999999887644
No 54
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=97.41 E-value=0.0014 Score=59.30 Aligned_cols=130 Identities=13% Similarity=0.033 Sum_probs=102.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH-HHH
Q 019995 11 ALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CSS 89 (332)
Q Consensus 11 ~~~~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g-~~~ 89 (332)
.-+..+...+..+|+...+..|.+-+. .+-..-+..-+..++++.+|+-... .. ..-.+.+.+..-...|++. .++
T Consensus 147 p~Gv~~Al~AG~~Wa~YIv~G~r~g~~-~~g~~g~a~gm~vAaviv~Pig~~~-ag-~~l~~p~ll~laLgvavlSSalP 223 (292)
T COG5006 147 PVGVALALGAGACWALYIVLGQRAGRA-EHGTAGVAVGMLVAALIVLPIGAAQ-AG-PALFSPSLLPLALGVAVLSSALP 223 (292)
T ss_pred HHHHHHHHHHhHHHHHHHHHcchhccc-CCCchHHHHHHHHHHHHHhhhhhhh-cc-hhhcChHHHHHHHHHHHHhcccc
Confidence 346667778899999999999988654 5667778888999999999986542 21 1123344455556788888 899
Q ss_pred HHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccc
Q 019995 90 QIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGA 149 (332)
Q Consensus 90 ~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv 149 (332)
+.+-..+++..+...-+++.++-|.+.++.++++++|.++..| |+|+.+.+.+.
T Consensus 224 YsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~q------wlaI~~ViaAs 277 (292)
T COG5006 224 YSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQ------WLAIAAVIAAS 277 (292)
T ss_pred hHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHH------HHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999876 55555544443
No 55
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=97.39 E-value=0.0014 Score=58.71 Aligned_cols=203 Identities=15% Similarity=0.051 Sum_probs=139.2
Q ss_pred HHHHHHHHHHHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeeeecCCC
Q 019995 79 FFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGP 158 (332)
Q Consensus 79 ~~~~gl~g~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~ 158 (332)
....++-.-+.+..-..+++|.+=-+.-+=-++-|+=+.+++.++.+++-. ++|...+++-+.|+++.. ++.+
T Consensus 88 YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~------w~kY~cVL~IV~GValFm-YK~~ 160 (337)
T KOG1580|consen 88 YAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYH------WRKYCCVLMIVVGVALFM-YKEN 160 (337)
T ss_pred HHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhccccc------HHHHHHHHHHHHHHHHhh-cccc
Confidence 345555556788888999999987777666778888888999999876654 456999999999998764 4422
Q ss_pred CCcCCCCCCCCCCcccCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhc-chhHHHHHHHHHHHHHHHHHHHHHHcCC
Q 019995 159 PLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKF-AAVLIIMFYLFFFNTILSTAFALIVVSE 237 (332)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~L~aa~~~A~~~vl~~~~~~~~-~~~~~~~~~~~~~g~i~l~~~~~~~~~~ 237 (332)
... +..+..+..|+++++++-..=.+-...|.|+.+.+ ++...|+.+..+.+++.+-.--++.+..
T Consensus 161 Kv~-------------g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGEl 227 (337)
T KOG1580|consen 161 KVG-------------GAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGEL 227 (337)
T ss_pred ccC-------------CCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhH
Confidence 111 11233456799999999888888888888875543 3456677777777777664433332221
Q ss_pred --CCCcc-ccchhhHHHHHHHh--hHHHHHHHHHHhccc-h--hhhhhchHHHHHHHHHHHHhCCccccchhh
Q 019995 238 --PSDWK-LGLDIGLVAVLYSV--SSYWHWVSSWLVHMV-P--VENWTSLCINVQALGHCLLYCHGCRHCRRR 302 (332)
Q Consensus 238 --~~~~~-~~~~~~~~~l~~~g--t~i~~~l~~~~l~~~-~--~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~ 302 (332)
...+. -++. .|+-+...| +.+++++...-...- | -|+....--.|+++.+.++++.+++.-+-.
T Consensus 228 weF~yF~~RhP~-~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwl 299 (337)
T KOG1580|consen 228 WEFFYFVQRHPY-VFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWL 299 (337)
T ss_pred HHHHHHHHhccH-HHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHH
Confidence 00010 1111 233333333 788888888888777 8 777788888999999999999998864433
No 56
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.31 E-value=0.0027 Score=60.63 Aligned_cols=140 Identities=11% Similarity=0.051 Sum_probs=105.6
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCH--HHHHHHHHHHHH
Q 019995 8 MRAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTF--SILCSFFLLSVF 85 (332)
Q Consensus 8 ~~~~~~~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~--~~~~~~~~~gl~ 85 (332)
..+.++-+.++.+++++|.+.+.-+...++ .|+..+.++=-+++.++..+.....+++...+.++ +.....+..++.
T Consensus 164 ~~~i~GDll~l~~a~lya~~nV~~E~~v~~-~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~ 242 (334)
T PF06027_consen 164 SNPILGDLLALLGAILYAVSNVLEEKLVKK-APRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALC 242 (334)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHH
Confidence 346778899999999999999999998865 79888888777888888887777667654433332 322222222222
Q ss_pred HHHHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeeee
Q 019995 86 GCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTF 154 (332)
Q Consensus 86 g~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~ 154 (332)
.+..+.+.-..+++++|+...+=.-++.++..++..+++||++++. ..+|.++.++|.++...
T Consensus 243 lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~l------y~~af~lIiiG~vvy~~ 305 (334)
T PF06027_consen 243 LFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWL------YILAFALIIIGFVVYNL 305 (334)
T ss_pred HHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHH------HHHHHHHHHHHhheEEc
Confidence 2555556667789999988877777889999999999999998764 48999999999987653
No 57
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.19 E-value=0.0062 Score=55.88 Aligned_cols=230 Identities=14% Similarity=0.075 Sum_probs=129.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhcCC----CC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhcccChhhHHHhhhhhH
Q 019995 40 NKYVIIVYSDALSSLFFLFCSFLFHRSE----RP--QLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIP 113 (332)
Q Consensus 40 ~p~~~~~~R~~~a~l~ll~~~~~~~~~~----~~--~~~~~~~~~~~~~gl~g~~~~~~~~~gl~~t~a~~asii~~~~P 113 (332)
.|..+..++++....+...+.....+-. .+ +++.+....+..+.+...+...+-...++|.+.+---+=-++.-
T Consensus 60 ~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLtt 139 (347)
T KOG1442|consen 60 APLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTT 139 (347)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccceehhhcceEEEEeccchhh
Confidence 6778888898888777666554432211 12 22333333333444333333344556777777655444456778
Q ss_pred HHHHHHHHHHHhhccccccccccchhhhhhheeccceeeeecCCCCCcCCCCCCCCCCcccCCCCccchhHHHHHHHHHH
Q 019995 114 AFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAF 193 (332)
Q Consensus 114 v~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~L~aa~ 193 (332)
+|++++++.++|+|-+.. . ++-+|++++.+.-|.+. |+..+.-...|.++...|.+
T Consensus 140 vFtVlLtyvllkqkTs~~-------~----~~~C~lIi~GF~lGvdq-------------E~~~~~ls~~GvifGVlaSl 195 (347)
T KOG1442|consen 140 VFTVLLTYVLLKQKTSFF-------A----LGCCLLIILGFGLGVDQ-------------EGSTGTLSWIGVIFGVLASL 195 (347)
T ss_pred hHHHHhHHhhcccccccc-------c----ceeehhheehheecccc-------------ccccCccchhhhHHHHHHHH
Confidence 999999999999986543 2 33344444333323221 11222223579999999999
Q ss_pred HHHHHHHHHHHHHHhcc-hhHHHHHHHHHHHHHHHHHHHHHHcCCCC-Cc--cccchhhHHHHHHHhhHHHHHHHH---H
Q 019995 194 MNSAWFILQALILRKFA-AVLIIMFYLFFFNTILSTAFALIVVSEPS-DW--KLGLDIGLVAVLYSVSSYWHWVSS---W 266 (332)
Q Consensus 194 ~~A~~~vl~~~~~~~~~-~~~~~~~~~~~~g~i~l~~~~~~~~~~~~-~~--~~~~~~~~~~l~~~gt~i~~~l~~---~ 266 (332)
+-|+..+..||...... .....+.+..+.+.++.+|.-.+ +++.. -+ +-.++...+.+..+++..+|.+.+ |
T Consensus 196 ~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~l-nge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~ 274 (347)
T KOG1442|consen 196 AVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLIL-NGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVTGW 274 (347)
T ss_pred HHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHH-cchHHHHcCcccchHHHHHHHHHHHHHHHHHhhheeeE
Confidence 99999999888755443 33456777778888877776544 33211 11 112233344444555444444433 2
Q ss_pred Hhccc-h------hhhhhchHHHHHHHHHHHHhCCcccc
Q 019995 267 LVHMV-P------VENWTSLCINVQALGHCLLYCHGCRH 298 (332)
Q Consensus 267 ~l~~~-~------~s~~~~l~Pv~a~il~~~~LgE~~~~ 298 (332)
-+|.. | .++=... -.+++..+++|..+.
T Consensus 275 QIK~TSplThnISgTAka~a----QTvlAv~~y~E~ks~ 309 (347)
T KOG1442|consen 275 QIKVTSPLTHNISGTAKAAA----QTVLAVAYYSETKSG 309 (347)
T ss_pred EEEecccceeeecHhHHHHH----HHHHHHHHHHHHhhh
Confidence 23333 4 2222333 355667789997653
No 58
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=96.94 E-value=0.0072 Score=55.86 Aligned_cols=132 Identities=10% Similarity=0.020 Sum_probs=91.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHH
Q 019995 10 AALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSS 89 (332)
Q Consensus 10 ~~~~~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~ 89 (332)
..|....++++.+-+.....+.|.. +.||.....=+..--.+.-..+.... ++. ..+++. .+-++-|++....
T Consensus 136 ~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPqaiGm~i~a~i~~~~~-~~~--~~~k~~-~~nil~G~~w~ig 208 (269)
T PF06800_consen 136 MKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQAIGMLIGAFIFNLFS-KKP--FFEKKS-WKNILTGLIWGIG 208 (269)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHHHHHHHHHHHHHhhcc-ccc--ccccch-HHhhHHHHHHHHH
Confidence 4668889999999998888888863 37887766655322222211222211 211 112222 3346778888888
Q ss_pred HHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccce
Q 019995 90 QIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAF 150 (332)
Q Consensus 90 ~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ 150 (332)
+.+++.+.+....+.+-.+.++.++...+-+.+++||+=++|++ ....+|+++.++|..
T Consensus 209 nl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~--~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 209 NLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEM--IYTLIGLILIVIGAI 267 (269)
T ss_pred HHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhH--HHHHHHHHHHHHhhh
Confidence 88899999999999999999999999999999999999776653 335677777777654
No 59
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=96.89 E-value=0.0019 Score=53.29 Aligned_cols=118 Identities=14% Similarity=0.084 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHcCCCCCccccchhhHHHHHHHhhHHHHHH
Q 019995 184 GGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSVSSYWHWV 263 (332)
Q Consensus 184 G~~l~L~aa~~~A~~~vl~~~~~~~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~gt~i~~~l 263 (332)
|.++.+.+.++-+..-++-|+-.++.++ ...... . . .... ...+ + ..+..+...+.++++.+
T Consensus 3 ~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~~-~----~-~~~~-~~~~--p--------~~~i~lgl~~~~la~~~ 64 (129)
T PRK02971 3 GYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAWD-F----I-AALL-AFGL--A--------LRAVLLGLAGYALSMLC 64 (129)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchhH-H----H-HHHH-HHhc--c--------HHHHHHHHHHHHHHHHH
Confidence 5677788888888888888887777642 221111 0 0 0001 0100 0 01122222227799999
Q ss_pred HHHHhccch---hhhhhchHHHHHHHHHHH--HhCCccccchhh---hhhheeeeeeeccCCcc
Q 019995 264 SSWLVHMVP---VENWTSLCINVQALGHCL--LYCHGCRHCRRR---FLSWKVLLINFFSNDFR 319 (332)
Q Consensus 264 ~~~~l~~~~---~s~~~~l~Pv~a~il~~~--~LgE~~~~~~~~---~~~~~~~~~~~~~~~~~ 319 (332)
|.+++++.| +.++..+.++...+.++. ++||+++..+-. +++-||+++|..+++-|
T Consensus 65 w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~~~ 128 (129)
T PRK02971 65 WLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTKAR 128 (129)
T ss_pred HHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 999999994 667777888888888885 899999986665 69999999998777655
No 60
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.69 E-value=0.0049 Score=49.49 Aligned_cols=110 Identities=15% Similarity=0.111 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q 019995 18 VIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGI 97 (332)
Q Consensus 18 i~~~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~~~~gl 97 (332)
+++.++||.+.+++|.+.+. .++..-.. |..--...+ .+++.+.+... ++-.....|+..+
T Consensus 2 l~Vg~~WG~Tnpfik~g~~~-~~~~~~~~-~~~~~~~~L----------------l~n~~y~ipf~-lNq~GSv~f~~~L 62 (113)
T PF10639_consen 2 LLVGILWGCTNPFIKRGSSG-LEKVKASL-QLLQEIKFL----------------LLNPKYIIPFL-LNQSGSVLFFLLL 62 (113)
T ss_pred eeehHHhcCchHHHHHHHhh-cCCccchH-HHHHHHHHH----------------HHhHHHHHHHH-HHHHHHHHHHHHH
Confidence 45788999999999998764 55544331 322222111 12233333222 2245667788899
Q ss_pred cccChhhHHHhh-hhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceee
Q 019995 98 QYSSPTLSTAML-NLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVV 152 (332)
Q Consensus 98 ~~t~a~~asii~-~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll 152 (332)
..++-+.+.-+. +++=++|++.++++.+|..+++ .++|+.+.++|+.+.
T Consensus 63 ~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~------~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 63 GSADLSLAVPIANSLAFVFTALTGWLLGEEVISRR------TWLGMALILAGVALC 112 (113)
T ss_pred hcCCceeeehHHhHHHHHHHHHHHHHhcCcccchh------HHHHHHHHHcCeeee
Confidence 999999888875 6777888888877766655443 499999999998763
No 61
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=96.64 E-value=0.032 Score=52.51 Aligned_cols=133 Identities=21% Similarity=0.262 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-CCCChHHHHHHHHHHHHHHHHHHHHHhh-cCCCC-----CCCHHHHHHHHHHHHH
Q 019995 13 PSVGMVIVLLAQVSNMEVIKAAMS-KGINKYVIIVYSDALSSLFFLFCSFLFH-RSERP-----QLTFSILCSFFLLSVF 85 (332)
Q Consensus 13 ~~l~li~~~~iwg~~~v~~K~~~~-~~~~p~~~~~~R~~~a~l~ll~~~~~~~-~~~~~-----~~~~~~~~~~~~~gl~ 85 (332)
++..++++.++-|...+..+...+ ++.++....++-.+++.++.++...... ...+. ....+.+..++...+.
T Consensus 155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~ 234 (303)
T PF08449_consen 155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLT 234 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHH
Confidence 778888888888999999888774 4578899999999998888776655511 11110 1112344556667777
Q ss_pred HHHHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheecccee
Q 019995 86 GCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFV 151 (332)
Q Consensus 86 g~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~l 151 (332)
++..+.+.+.-.+..+|...+++..+--+++.+++..+++++++..+ |+|+++.+.|..+
T Consensus 235 ~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~------~~G~~lv~~g~~~ 294 (303)
T PF08449_consen 235 GALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQ------WIGIVLVFAGIFL 294 (303)
T ss_pred HHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHH------HHHHHHhHHHHHH
Confidence 77777777788899999999999999999999999999999998765 9999999999865
No 62
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.58 E-value=0.11 Score=48.76 Aligned_cols=115 Identities=18% Similarity=0.169 Sum_probs=78.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHh-hcCCCCCCCHHHHHHHHHHHHHH-HH
Q 019995 11 ALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLF-HRSERPQLTFSILCSFFLLSVFG-CS 88 (332)
Q Consensus 11 ~~~~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~-~~~~~~~~~~~~~~~~~~~gl~g-~~ 88 (332)
..+.+..+.+.+..|+++.+-|.+... .... -.+ ..+..+.+ +++ .-..|++- .+
T Consensus 20 ~~G~~LaissS~~Ig~sfilkKkgl~r-----------~~~~--------~~ra~~gg~~yl--~~~--~Ww~G~ltm~v 76 (335)
T KOG2922|consen 20 IIGLVLAISSSIFIGSSFILKKKGLKR-----------AGAS--------GLRAGEGGYGYL--KEP--LWWAGMLTMIV 76 (335)
T ss_pred eeeeeehhhccEEEeeehhhhHHHHHH-----------Hhhh--------cccccCCCcchh--hhH--HHHHHHHHHHH
Confidence 345555666666678888888876432 1110 001 01111222 221 12345555 56
Q ss_pred HHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeeee
Q 019995 89 SQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTF 154 (332)
Q Consensus 89 ~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~ 154 (332)
+....|.++.+.|++..+-+.+++-+..++++..++|||++.+. .+|..++++|-.+++.
T Consensus 77 Gei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g------~lGc~l~v~Gst~iV~ 136 (335)
T KOG2922|consen 77 GEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLG------ILGCVLCVVGSTTIVI 136 (335)
T ss_pred HhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhh------hhheeEEecccEEEEE
Confidence 67777778889999999999999999999999999999999775 8999999999998873
No 63
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=96.56 E-value=0.0028 Score=57.96 Aligned_cols=127 Identities=15% Similarity=0.081 Sum_probs=91.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH
Q 019995 11 ALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQ 90 (332)
Q Consensus 11 ~~~~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~ 90 (332)
.+.-...+.+++.-++.+++.|..-. ..+.+..+.+=..++.+.-+..+. ...+...+...+|+..++.+|++|+++|
T Consensus 190 ~~gt~aai~s~lf~asvyIilR~iGk-~~h~~msvsyf~~i~lV~s~I~~~-~ig~~~lP~cgkdr~l~~~lGvfgfigQ 267 (346)
T KOG4510|consen 190 IPGTVAAISSVLFGASVYIILRYIGK-NAHAIMSVSYFSLITLVVSLIGCA-SIGAVQLPHCGKDRWLFVNLGVFGFIGQ 267 (346)
T ss_pred CCchHHHHHhHhhhhhHHHHHHHhhc-cccEEEEehHHHHHHHHHHHHHHh-hccceecCccccceEEEEEehhhhhHHH
Confidence 34566666677766777888886433 466666665555555544332221 1233334456678888889999999999
Q ss_pred HHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhhe
Q 019995 91 IFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFAS 145 (332)
Q Consensus 91 ~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~ 145 (332)
++...|+|---++-.++..++.-++..+.-.++++|..|+ +.|.|.++.
T Consensus 268 IllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~------ws~~Ga~~v 316 (346)
T KOG4510|consen 268 ILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTI------WSWVGAVMV 316 (346)
T ss_pred HHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChH------HHhhceeee
Confidence 9999999999999999999999999999999999987654 446665543
No 64
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=96.53 E-value=0.022 Score=51.02 Aligned_cols=121 Identities=12% Similarity=-0.010 Sum_probs=69.3
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHH-HHHHHHHHHHHHHHcC-C-CCCcc--ccchhhHHHHHH
Q 019995 180 SWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLF-FFNTILSTAFALIVVS-E-PSDWK--LGLDIGLVAVLY 254 (332)
Q Consensus 180 ~~~~G~~l~L~aa~~~A~~~vl~~~~~~~~~~~~~~~~~~~-~~g~i~l~~~~~~~~~-~-~~~~~--~~~~~~~~~l~~ 254 (332)
+...|....+.+..+-+...+.+++..|+.+........+. +.+.+... ....... + ...+. .......+.++.
T Consensus 82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (222)
T TIGR00803 82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTF-SVLLWSDGTLISNFGFFIGYPTAVWIVGL 160 (222)
T ss_pred cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHH-HHHhhcccchhhccCcccCCchHHHHHHH
Confidence 34578888888888888888888887555422222212222 22222211 1111111 1 01111 011111222222
Q ss_pred HhhHHHHHHHHHHhccc-h--hhhhhchHHHHHHHHHHHHhCCccccchhh
Q 019995 255 SVSSYWHWVSSWLVHMV-P--VENWTSLCINVQALGHCLLYCHGCRHCRRR 302 (332)
Q Consensus 255 ~gt~i~~~l~~~~l~~~-~--~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~ 302 (332)
. .+++..+..+.+++. + .+....++++++.+++++++||+++..+-.
T Consensus 161 ~-~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~ 210 (222)
T TIGR00803 161 L-NVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYL 210 (222)
T ss_pred H-HHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHH
Confidence 1 456666678888888 6 888888999999999999999999876544
No 65
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=96.45 E-value=0.0073 Score=48.31 Aligned_cols=57 Identities=18% Similarity=0.076 Sum_probs=45.3
Q ss_pred hHHHHHHHHHHhccc-h-hhhhhchHHHHHHHHHHHHhCCccccchhh---hhhheeeeeee
Q 019995 257 SSYWHWVSSWLVHMV-P-VENWTSLCINVQALGHCLLYCHGCRHCRRR---FLSWKVLLINF 313 (332)
Q Consensus 257 t~i~~~l~~~~l~~~-~-~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~---~~~~~~~~~~~ 313 (332)
...++.++.++.++. + +++...+.|++++++|+++++|+++..+-. +..-||++++.
T Consensus 45 ~~~~~~~~~~a~~~~~~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~ 106 (113)
T PF13536_consen 45 FGVAYLLFFYALSYAPALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAW 106 (113)
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh
Confidence 347899999999999 5 788888999999999999999988865433 35556665543
No 66
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.28 E-value=0.026 Score=45.14 Aligned_cols=60 Identities=13% Similarity=0.040 Sum_probs=51.3
Q ss_pred HHHHHHHHHhhcccChhhHHH-hhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceee
Q 019995 87 CSSQIFSFVGIQYSSPTLSTA-MLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVV 152 (332)
Q Consensus 87 ~~~~~~~~~gl~~t~a~~asi-i~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll 152 (332)
...+++...++++.|.+.|=. .....-+.+++++.+++||++++. |++|+.+-+.|+..+
T Consensus 46 ~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~------~~~gi~lIi~GVi~l 106 (109)
T PRK10650 46 LAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRK------GWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHh
Confidence 788899999999999998844 456778889999999999999876 499999999998654
No 67
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=96.13 E-value=0.00028 Score=63.57 Aligned_cols=268 Identities=12% Similarity=0.046 Sum_probs=152.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 019995 13 PSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIF 92 (332)
Q Consensus 13 ~~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~ 92 (332)
.++..++-++.||+...+...- . -+|.+=..---+-| ++.....++. .+|..+.+.+..-++-|++....|..
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~--G-G~p~qQ~lGtT~GA-Lifaiiv~~~---~~p~~T~~~~iv~~isG~~Ws~GQ~~ 75 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKF--G-GKPYQQTLGTTLGA-LIFAIIVFLF---VSPELTLTIFIVGFISGAFWSFGQAN 75 (288)
T ss_pred hHHHHHHHHHHhcccceeeeec--C-CChhHhhhhccHHH-HHHHHHHhee---ecCccchhhHHHHHHhhhHhhhhhhh
Confidence 4567778899999998875542 2 24443332222223 3222222222 23566777776667777777899999
Q ss_pred HHHhhcccChhhHHHhh-hhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeeeecCCCCCcCCCCCCCCCC
Q 019995 93 SFVGIQYSSPTLSTAML-NLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPR 171 (332)
Q Consensus 93 ~~~gl~~t~a~~asii~-~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~ 171 (332)
.+.++++.+.++|-=+. .++=+-+.+.+.++++|.-+.-+. ..-.+++++-+.|+.+-+.. . +. | +
T Consensus 76 Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~--IlG~iAliliviG~~lTs~~-~-~~-------n--k 142 (288)
T COG4975 76 QFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQI--ILGFIALILIVIGIYLTSKQ-D-RN-------N--K 142 (288)
T ss_pred hhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhH--HHHHHHHHHHHHhheEeeee-c-cc-------c--c
Confidence 99999999999886664 466677788888999998654431 11233455667777664421 1 10 0 0
Q ss_pred cccCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHcCCCCCccccchhhHHH
Q 019995 172 RLLLSPQLSWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVA 251 (332)
Q Consensus 172 ~~~~~~~~~~~~G~~l~L~aa~~~A~~~vl~~~~~~~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~ 251 (332)
+.+...+.-.|...++.+.+.|-.|.++.+.. +. |..+...-|. +|.+.....--....+...-...+......
T Consensus 143 --~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f--~v-~g~saiLPqA-iGMv~~ali~~~~~~~~~~~K~t~~nii~G 216 (288)
T COG4975 143 --EEENPSNLKKGIVILLISTLGYVGYVVLFQLF--DV-DGLSAILPQA-IGMVIGALILGFFKMEKRFNKYTWLNIIPG 216 (288)
T ss_pred --cccChHhhhhheeeeeeeccceeeeEeeeccc--cc-cchhhhhHHH-HHHHHHHHHHhhcccccchHHHHHHHHhhH
Confidence 11122334678888899999999999886544 23 3444444443 444444333222221111001111111112
Q ss_pred HHHHhhHHHHHHHHHHhccc-hhhhh--hchHHHHHHHHHHHHhCCccccchhhhhhheee
Q 019995 252 VLYSVSSYWHWVSSWLVHMV-PVENW--TSLCINVQALGHCLLYCHGCRHCRRRFLSWKVL 309 (332)
Q Consensus 252 l~~~gt~i~~~l~~~~l~~~-~~s~~--~~l~Pv~a~il~~~~LgE~~~~~~~~~~~~~~~ 309 (332)
+. =+++...+..+.++. -+..| +=+.-+++.+-|.++|+|+=+--.-+.++-|++
T Consensus 217 ~~---Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGii 274 (288)
T COG4975 217 LI---WAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGII 274 (288)
T ss_pred HH---HHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHH
Confidence 22 235555556666666 23333 335678889999999999977655444444433
No 68
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=96.03 E-value=0.059 Score=48.24 Aligned_cols=231 Identities=14% Similarity=0.122 Sum_probs=141.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHH
Q 019995 42 YVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAI 121 (332)
Q Consensus 42 ~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~ 121 (332)
+.+.+.+.+.+.+-+...-+.+.- +.+.++.+..+...++-....+.--.+++|.+...-++.-+++-+.++..-.
T Consensus 38 flll~vQSlvcvv~l~iLk~l~~~----~fR~t~aK~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAygEv 113 (309)
T COG5070 38 FLLLAVQSLVCVVGLLILKFLRLV----EFRLTKAKKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEV 113 (309)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHh----heehhhhhhhcCHHHHHHHHHHhcccceeeeeeeHHHHhccceeehhHhhHH
Confidence 456677777776665543222111 2223344445566666555555666789999999999999999888888888
Q ss_pred HHHhhccccccccccchhhhhhheeccceeeeecCCCCCcCCCCCCCCCCcccCCCCccchhHHHHHHHHHHHHHHHHHH
Q 019995 122 IFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWILGGFFLAAEAFMNSAWFIL 201 (332)
Q Consensus 122 l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~L~aa~~~A~~~vl 201 (332)
++++.|++.-. ...-++.++--..-. +.|. + +..........|-+++...+++-|.|...
T Consensus 114 l~Fgg~vtsl~------l~SFilMvlSS~va~---w~D~------q-----~~~~~~~~lN~GY~Wm~~NclssaafVL~ 173 (309)
T COG5070 114 LFFGGRVTSLE------LLSFILMVLSSVVAT---WGDQ------Q-----ASAFKAQILNPGYLWMFTNCLSSAAFVLI 173 (309)
T ss_pred HHhcCccchhh------HHHHHHHHHHHHHhc---cchh------h-----HHHHHhcccCCceEEEehhhHhHHHHHHH
Confidence 88888876432 333333333322211 1110 0 00000112346888899999999999888
Q ss_pred HHHHH--HhcchhHHHHHHHHHHHHHHHHHHHHHHcCC-CCCccc-cchhhHHHHHHHh---hHHHHHHHHHHhccc-h-
Q 019995 202 QALIL--RKFAAVLIIMFYLFFFNTILSTAFALIVVSE-PSDWKL-GLDIGLVAVLYSV---SSYWHWVSSWLVHMV-P- 272 (332)
Q Consensus 202 ~~~~~--~~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~-~~~~~~-~~~~~~~~l~~~g---t~i~~~l~~~~l~~~-~- 272 (332)
.||.. .+..| ..-++|..+.+...++.++..+|+. +....- .....+.++...| -+++ +.-.|+.+.. +
T Consensus 174 mrkri~ltNf~d-~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiS-y~saWcvrVtSST 251 (309)
T COG5070 174 MRKRIKLTNFKD-FDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGIS-YCSAWCVRVTSST 251 (309)
T ss_pred HHHhhcccccch-hhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhh-hccceeEeehhhh
Confidence 77764 23333 3346899999999999998877652 111100 0111233455555 2233 3446788777 4
Q ss_pred -hhhhhchHHHHHHHHHHHHhCCcccc
Q 019995 273 -VENWTSLCINVQALGHCLLYCHGCRH 298 (332)
Q Consensus 273 -~s~~~~l~Pv~a~il~~~~LgE~~~~ 298 (332)
-++...+.-.-.++.|.+++||+...
T Consensus 252 tySMvGALNKlp~alaGlvffdap~nf 278 (309)
T COG5070 252 TYSMVGALNKLPIALAGLVFFDAPVNF 278 (309)
T ss_pred HHHHHHHhhhChHHHhhhhhcCCchhH
Confidence 67777777778899999999998765
No 69
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.01 E-value=0.028 Score=45.04 Aligned_cols=60 Identities=17% Similarity=0.228 Sum_probs=50.9
Q ss_pred hHHHHHHHHHHhccch----hhhhhchHHHHHHHHHHHHhCCccccchhh---hhhheeeeeeeccC
Q 019995 257 SSYWHWVSSWLVHMVP----VENWTSLCINVQALGHCLLYCHGCRHCRRR---FLSWKVLLINFFSN 316 (332)
Q Consensus 257 t~i~~~l~~~~l~~~~----~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~---~~~~~~~~~~~~~~ 316 (332)
-++++.++..++++.| -++..-+.-+..+++|++++||++++.+-. +++-||++.|+.++
T Consensus 40 ~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~~ 106 (110)
T PRK09541 40 YCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLSR 106 (110)
T ss_pred HHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 4588888889998886 456666788889999999999999998877 58999999998775
No 70
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=95.90 E-value=0.027 Score=45.09 Aligned_cols=54 Identities=13% Similarity=0.034 Sum_probs=44.4
Q ss_pred hHHHHHHHHHHhccch---hhhhhchHHHHHHHHHHHHhCCccccchhh---hhhheeee
Q 019995 257 SSYWHWVSSWLVHMVP---VENWTSLCINVQALGHCLLYCHGCRHCRRR---FLSWKVLL 310 (332)
Q Consensus 257 t~i~~~l~~~~l~~~~---~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~---~~~~~~~~ 310 (332)
.++++.++.+++++.| +.+...+.|+.++++|++++||+++..+-. +++.||++
T Consensus 47 ~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~ 106 (111)
T PRK15051 47 LGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVI 106 (111)
T ss_pred HHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHH
Confidence 5678899999999995 556666999999999999999999987776 46666653
No 71
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=95.75 E-value=0.19 Score=46.70 Aligned_cols=122 Identities=11% Similarity=0.007 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 019995 21 LLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSER--PQLTFSILCSFFLLSVFGCSSQIFSFVGIQ 98 (332)
Q Consensus 21 ~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~--~~~~~~~~~~~~~~gl~g~~~~~~~~~gl~ 98 (332)
++.||..+.+=|.. ++|+.+=...-.+.-.+.-+.+.....-... -.-+.+.+..++..|...+++..++..|-+
T Consensus 157 a~sf~~Ygl~RK~~---~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~vTavpL~lf~~aa~ 233 (293)
T COG2962 157 ALSFGLYGLLRKKL---KVDALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLVTAVPLLLFAAAAK 233 (293)
T ss_pred HHHHHHHHHHHHhc---CCchHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 44566666666642 3677766666665555544443333221110 112456677888899999999999999999
Q ss_pred ccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheecccee
Q 019995 99 YSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFV 151 (332)
Q Consensus 99 ~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~l 151 (332)
..+-+.-++++|..|.+..+++.++++|+++..| .+.-+.--+|+++
T Consensus 234 ~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~------~~~F~~IW~aL~l 280 (293)
T COG2962 234 RLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQ------LVTFAFIWLALAL 280 (293)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHH
Confidence 9999999999999999999999999999998765 5555554455444
No 72
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=95.66 E-value=0.016 Score=47.18 Aligned_cols=65 Identities=15% Similarity=0.160 Sum_probs=55.2
Q ss_pred HHHH-HHHHHHHHHhhcccChhhHHHh-hhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeee
Q 019995 83 SVFG-CSSQIFSFVGIQYSSPTLSTAM-LNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (332)
Q Consensus 83 gl~g-~~~~~~~~~gl~~t~a~~asii-~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~ 153 (332)
.+.. ...++++..++++.|.+.|=.+ ....-+.+++++.++++|++++. |++|+.+-++|+..+-
T Consensus 36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~------~~~gi~lIi~GVi~l~ 102 (120)
T PRK10452 36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLM------KIAGLTTLVAGIVLIK 102 (120)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHhh
Confidence 3444 7889999999999999998555 46788899999999999999876 5999999999998764
No 73
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=95.63 E-value=0.014 Score=46.13 Aligned_cols=63 Identities=14% Similarity=0.094 Sum_probs=53.8
Q ss_pred HHH-HHHHHHHHHhhcccChhhH-HHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceee
Q 019995 84 VFG-CSSQIFSFVGIQYSSPTLS-TAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVV 152 (332)
Q Consensus 84 l~g-~~~~~~~~~gl~~t~a~~a-sii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll 152 (332)
+.+ ...+.+...++++.|.+.| ++....--+.+++.++++++|+++.. |++|+.+-++|++.+
T Consensus 37 ~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~------~~~gl~LiiaGvi~L 101 (106)
T COG2076 37 IVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLI------KLLGLALILAGVIGL 101 (106)
T ss_pred HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHH------HHHHHHHHHHHHHHh
Confidence 444 7889999999999999998 45567888999999999999999876 599999999998764
No 74
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=95.63 E-value=0.04 Score=43.65 Aligned_cols=60 Identities=18% Similarity=0.191 Sum_probs=52.1
Q ss_pred hHHHHHHHHHHhccch----hhhhhchHHHHHHHHHHHHhCCccccchhh---hhhheeeeeeeccC
Q 019995 257 SSYWHWVSSWLVHMVP----VENWTSLCINVQALGHCLLYCHGCRHCRRR---FLSWKVLLINFFSN 316 (332)
Q Consensus 257 t~i~~~l~~~~l~~~~----~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~---~~~~~~~~~~~~~~ 316 (332)
-.++|.+...++|+.| -++++-+..+-+++.|++++||+.+..+.. .++-||++.|+.++
T Consensus 40 ~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s~ 106 (106)
T COG2076 40 YGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGSR 106 (106)
T ss_pred HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcCC
Confidence 5588999999999996 567888889999999999999999998877 58899999998764
No 75
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=95.51 E-value=0.11 Score=47.83 Aligned_cols=270 Identities=12% Similarity=0.112 Sum_probs=148.4
Q ss_pred HHHHHHHHHHHHHHHHHhCCCChH--HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 019995 19 IVLLAQVSNMEVIKAAMSKGINKY--VIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVG 96 (332)
Q Consensus 19 ~~~~iwg~~~v~~K~~~~~~~~p~--~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~~~~g 96 (332)
+..+.+|.....+=-. .++.|+ .++..+++.-+.+-+.-....+. +++..++|. ...++.+-.+.+.+-.-+
T Consensus 53 f~Yl~yGy~qElif~~--~gfkp~GWylTlvQf~~Ysg~glie~~~~~~-k~r~iP~rt---Y~~la~~t~gtmGLsn~S 126 (367)
T KOG1582|consen 53 FLYLVYGYLQELIFNV--EGFKPFGWYLTLVQFLVYSGFGLIELQLIQT-KRRVIPWRT---YVILAFLTVGTMGLSNGS 126 (367)
T ss_pred HHHHHHHHHHHHHhcc--ccCcccchHHHHHHHHHHHhhhheEEEeecc-cceecchhH---hhhhHhhhhhccccCcCc
Confidence 3444455554443321 246654 67888888776654433222222 233445543 334443333444444444
Q ss_pred hcccChhhHHHhhhhhHHHHHH-HHHHHHhhccccccccccchhhhhhheeccceeeeecCCCCCcCCCCCCCCCCcccC
Q 019995 97 IQYSSPTLSTAMLNLIPAFTFV-LAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLL 175 (332)
Q Consensus 97 l~~t~a~~asii~~~~Pv~~~i-la~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~ 175 (332)
+.|.+=- +.++.-+.-+.-++ .+.++-+.| +.....+...+-.+|++...+-++. -
T Consensus 127 lgYLNYP-tQviFKccKliPVmiggifIqGkR------Y~v~d~~aA~lm~lGli~FTLADs~----------------~ 183 (367)
T KOG1582|consen 127 LGYLNYP-TQVIFKCCKLIPVMIGGIFIQGKR------YGVHDYIAAMLMSLGLIWFTLADSQ----------------T 183 (367)
T ss_pred cccccCc-HHHHHHhhhhhhhhheeeeecccc------ccHHHHHHHHHHHHHHHhhhhcccc----------------c
Confidence 4444322 33444333333233 334444433 5566688888888888664422110 0
Q ss_pred CCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhHHHHHHHHHHHHHHHHHHHHHHcCCCCCccc---cchhhHHH
Q 019995 176 SPQLSWILGGFFLAAEAFMNSAWFILQALILRKFA-AVLIIMFYLFFFNTILSTAFALIVVSEPSDWKL---GLDIGLVA 251 (332)
Q Consensus 176 ~~~~~~~~G~~l~L~aa~~~A~~~vl~~~~~~~~~-~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~~~~---~~~~~~~~ 251 (332)
+... ...|+.+.-+|-++=|.-.-+|.|..+..+ +...+.+++..+|.++++..-....+-.++|+. ++......
T Consensus 184 sPNF-~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy 262 (367)
T KOG1582|consen 184 SPNF-NLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGY 262 (367)
T ss_pred CCCc-ceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHH
Confidence 1112 257998888888888888888999877765 345578888899999887765544443445542 11101111
Q ss_pred HHHHhhHHHHHHHHHHhcc---c-h--hhhhhchHHHHHHHHHHHHhCCccccchhh---hhhheeeeeeeccCCccc
Q 019995 252 VLYSVSSYWHWVSSWLVHM---V-P--VENWTSLCINVQALGHCLLYCHGCRHCRRR---FLSWKVLLINFFSNDFRF 320 (332)
Q Consensus 252 l~~~gt~i~~~l~~~~l~~---~-~--~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~---~~~~~~~~~~~~~~~~~~ 320 (332)
..+. +..+|.-+...+.. - + ++.....--.++.+++++++..|++..+.- .+.-| +.-|+.+|||.-
T Consensus 263 ~~~~-s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lg-I~Ln~ysk~nk~ 338 (367)
T KOG1582|consen 263 AFLF-SLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLG-IYLNMYSKRNKI 338 (367)
T ss_pred HHHH-HHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHH-HHhhcccCCCCC
Confidence 1111 22333223333322 2 2 666666778899999999999999987655 22222 255888888764
No 76
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=95.51 E-value=0.065 Score=43.60 Aligned_cols=60 Identities=18% Similarity=0.118 Sum_probs=50.6
Q ss_pred hHHHHHHHHHHhccch----hhhhhchHHHHHHHHHHHHhCCccccchhh---hhhheeeeeeeccC
Q 019995 257 SSYWHWVSSWLVHMVP----VENWTSLCINVQALGHCLLYCHGCRHCRRR---FLSWKVLLINFFSN 316 (332)
Q Consensus 257 t~i~~~l~~~~l~~~~----~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~---~~~~~~~~~~~~~~ 316 (332)
-+++++++..++++.| -+.+.-+.-+.++++|++++||+++..+-. +++-||++.|..++
T Consensus 40 ~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~ 106 (120)
T PRK10452 40 ISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTR 106 (120)
T ss_pred HHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence 5588999999999886 456666788999999999999999998777 58899999998763
No 77
>PRK11431 multidrug efflux system protein; Provisional
Probab=95.44 E-value=0.083 Score=41.93 Aligned_cols=60 Identities=12% Similarity=0.179 Sum_probs=51.5
Q ss_pred hHHHHHHHHHHhccch----hhhhhchHHHHHHHHHHHHhCCccccchhh---hhhheeeeeeeccC
Q 019995 257 SSYWHWVSSWLVHMVP----VENWTSLCINVQALGHCLLYCHGCRHCRRR---FLSWKVLLINFFSN 316 (332)
Q Consensus 257 t~i~~~l~~~~l~~~~----~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~---~~~~~~~~~~~~~~ 316 (332)
-+++|++...++|+.| -+++.-+.-+.+++.|++++||++++.+-. .++.||++.|+.++
T Consensus 39 ~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~~~ 105 (105)
T PRK11431 39 MIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKLSTH 105 (105)
T ss_pred HHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhccCC
Confidence 5588899999998886 567777889999999999999999998887 48899999987653
No 78
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=95.42 E-value=0.044 Score=42.42 Aligned_cols=56 Identities=18% Similarity=0.110 Sum_probs=32.9
Q ss_pred HHHH-HHHHHHHHHhhcccChhhH-HHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhh
Q 019995 83 SVFG-CSSQIFSFVGIQYSSPTLS-TAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFA 144 (332)
Q Consensus 83 gl~g-~~~~~~~~~gl~~t~a~~a-sii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l 144 (332)
.+.. ...+.++..++++.|.+.+ ++...+..+.+.+.+..+++|+++.+| ++|+.+
T Consensus 35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~------~~gi~l 92 (93)
T PF00893_consen 35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSK------WLGIGL 92 (93)
T ss_dssp HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------Hhheee
Confidence 3334 7888999999999999999 555678999999999999999998764 777754
No 79
>PRK11431 multidrug efflux system protein; Provisional
Probab=95.41 E-value=0.03 Score=44.47 Aligned_cols=63 Identities=11% Similarity=-0.031 Sum_probs=53.4
Q ss_pred HHH-HHHHHHHHHhhcccChhhHHH-hhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceee
Q 019995 84 VFG-CSSQIFSFVGIQYSSPTLSTA-MLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVV 152 (332)
Q Consensus 84 l~g-~~~~~~~~~gl~~t~a~~asi-i~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll 152 (332)
+.+ ...+++...++++.|.+.|=. .....-+.+.+++.++++|++++. |++|+.+-++|++.+
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~------~~~gi~lIi~GVv~l 100 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPA------RLLSLALIVAGIIGL 100 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHhh
Confidence 444 788999999999999998844 455888999999999999999876 499999999999765
No 80
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=95.37 E-value=0.026 Score=45.16 Aligned_cols=66 Identities=15% Similarity=0.208 Sum_probs=54.8
Q ss_pred HHHHH-HHHHHHHHHhhcccChhhHHHh-hhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeee
Q 019995 82 LSVFG-CSSQIFSFVGIQYSSPTLSTAM-LNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (332)
Q Consensus 82 ~gl~g-~~~~~~~~~gl~~t~a~~asii-~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~ 153 (332)
..+.+ ...+.++..++++.|.+.|=.+ ....-+.+.++++++++|++++. |++|+.+-++|+..+-
T Consensus 35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~------~~~gi~lIi~GVi~l~ 102 (110)
T PRK09541 35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLVIN 102 (110)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHh
Confidence 34555 7888899999999999988555 55778888999999999999876 4999999999998764
No 81
>PRK13499 rhamnose-proton symporter; Provisional
Probab=95.34 E-value=0.31 Score=46.81 Aligned_cols=143 Identities=13% Similarity=0.011 Sum_probs=87.7
Q ss_pred hhhHHHHHHHHHHHHHHHH-------HHHHHHHhCCCChHHHHHHHHH---HHHHHHHH-HHHHh--hcCCC-----CCC
Q 019995 10 AALPSVGMVIVLLAQVSNM-------EVIKAAMSKGINKYVIIVYSDA---LSSLFFLF-CSFLF--HRSER-----PQL 71 (332)
Q Consensus 10 ~~~~~l~li~~~~iwg~~~-------v~~K~~~~~~~~p~~~~~~R~~---~a~l~ll~-~~~~~--~~~~~-----~~~ 71 (332)
..|+...++++.+..+... +.-+.+.+.+.+|.....-.+. ++..+.-+ ++.+. ++|.. ++.
T Consensus 172 ~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~ 251 (345)
T PRK13499 172 LKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFSL 251 (345)
T ss_pred hHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhccc
Confidence 4678888888888877777 6666554556777766666665 44443332 22222 11221 111
Q ss_pred C----HHHHHHHHHHHHHHHHHHHHHHHhhcccChhhHHH---hh-hhhHHHHHHHHHHHHhhccccccccccchhhhhh
Q 019995 72 T----FSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTA---ML-NLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTF 143 (332)
Q Consensus 72 ~----~~~~~~~~~~gl~g~~~~~~~~~gl~~t~a~~asi---i~-~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~ 143 (332)
+ .++....++-|++-...+.+|.+|....+...+.+ +. ++.-++..+-+. ++||+=+-.+|.-+.-++|++
T Consensus 252 ~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~v 330 (345)
T PRK13499 252 AKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCV 330 (345)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHH
Confidence 2 23333345566666788888999888876655555 55 444455555555 689987644445566789999
Q ss_pred heeccceeee
Q 019995 144 ASIGGAFVVT 153 (332)
Q Consensus 144 l~~~Gv~ll~ 153 (332)
+-++|+.++.
T Consensus 331 liI~g~~lig 340 (345)
T PRK13499 331 VIILAANIVG 340 (345)
T ss_pred HHHHHHHHHh
Confidence 9999987754
No 82
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=95.31 E-value=0.13 Score=41.16 Aligned_cols=57 Identities=12% Similarity=0.059 Sum_probs=48.9
Q ss_pred hHHHHHHHHHHhccch----hhhhhchHHHHHHHHHHHHhCCccccchhh---hhhheeeeeee
Q 019995 257 SSYWHWVSSWLVHMVP----VENWTSLCINVQALGHCLLYCHGCRHCRRR---FLSWKVLLINF 313 (332)
Q Consensus 257 t~i~~~l~~~~l~~~~----~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~---~~~~~~~~~~~ 313 (332)
-+++|++...++|+.| -+++.-+.-+.+++.|++++||++++.+-. .++.||++.|+
T Consensus 45 ~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lkl 108 (109)
T PRK10650 45 VLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIKL 108 (109)
T ss_pred HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 5689999999999886 567777888999999999999999998877 48888888774
No 83
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=95.09 E-value=0.028 Score=53.29 Aligned_cols=135 Identities=16% Similarity=0.175 Sum_probs=102.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHH---hCCCChHHHHHHHHHHHHHHHH-HHHHHhhcCCC-----CCCCHHHHHHHH
Q 019995 10 AALPSVGMVIVLLAQVSNMEVIKAAM---SKGINKYVIIVYSDALSSLFFL-FCSFLFHRSER-----PQLTFSILCSFF 80 (332)
Q Consensus 10 ~~~~~l~li~~~~iwg~~~v~~K~~~---~~~~~p~~~~~~R~~~a~l~ll-~~~~~~~~~~~-----~~~~~~~~~~~~ 80 (332)
...+.+...++.+..+...+++|..+ ++..++..+..+---++..+++ |+....+.... ...+.+ .....
T Consensus 161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~ 239 (316)
T KOG1441|consen 161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILL 239 (316)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHH
Confidence 46688888899999999999999988 3358999999999899999988 88666443221 122223 23334
Q ss_pred HHHHHHHHHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheecccee
Q 019995 81 LLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFV 151 (332)
Q Consensus 81 ~~gl~g~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~l 151 (332)
...++....+...|+.+..++|-+=++....==.++...++++++|+++..+ ..|..++++|+.+
T Consensus 240 ~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n------~~G~~iai~Gv~~ 304 (316)
T KOG1441|consen 240 LNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLN------ALGYAIAILGVFL 304 (316)
T ss_pred HHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhh------HHHHHHHHHHHHH
Confidence 4555557778888999999999887777665555566678888899988765 9999999999975
No 84
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=94.40 E-value=0.4 Score=44.33 Aligned_cols=256 Identities=13% Similarity=0.117 Sum_probs=146.5
Q ss_pred HHHHHHHHHHhCC-CChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccc-Chh
Q 019995 26 SNMEVIKAAMSKG-INKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYS-SPT 103 (332)
Q Consensus 26 ~~~v~~K~~~~~~-~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~~~~gl~~t-~a~ 103 (332)
++.++.-...+.+ -+-..+++.+|++-++-=+++.--+. ..+++.+.|++.. ...++ +..+.+..+++++- +-.
T Consensus 17 snvv~lE~L~~~~pgsgNLITFaqFlFia~eGlif~skf~-~~k~kiplk~Y~i--~V~mF-F~vnv~NN~al~f~I~~P 92 (330)
T KOG1583|consen 17 SNVVFLELLVRNEPGSGNLITFAQFLFIATEGLIFTSKFF-TVKPKIPLKDYAI--TVAMF-FIVNVTNNYALKFNIPMP 92 (330)
T ss_pred chHHHHHHHHHhCCCCeeehHHHHHHHHHHhceeeecccc-ccCCCCchhhhhe--ehhee-eeeeeeccceeeecccce
Confidence 4455544444332 23357788888877664443321111 1235677776433 33333 34555666777774 444
Q ss_pred hHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeeeecCCCCCcCCCCCCCCCCcccCCCCccchh
Q 019995 104 LSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLIGELSHSGSPRRLLLSPQLSWIL 183 (332)
Q Consensus 104 ~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (332)
.=-++-+-.++-+.++++++.+.|-+ ..|+..+.+--+|+++-.+.+.++.... +++.+.+++..+...|..
T Consensus 93 lHiIfRsgsll~nM~~g~il~~k~Ys------~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~--~~~l~~~~~~~~~~~w~i 164 (330)
T KOG1583|consen 93 LHIIFRSGSLLANMILGWILLGKRYS------LRQYSSVLMITIGIIICTLFSSKDGRSK--LSGLDSGSAQSDFFWWLI 164 (330)
T ss_pred EEEEEecCcHHHHHHHHHHhccceee------hhhhhhHHhhhhhheeEEeecCcchhhh--hcccccCcccccchHHHH
Confidence 44445567788889999999776554 4569999999999988877655443220 111111112223345689
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc-hhHHHHHHHHHHHHHHHHHHHHHHcCCC-CCc--------------cccchh
Q 019995 184 GGFFLAAEAFMNSAWFILQALILRKFA-AVLIIMFYLFFFNTILSTAFALIVVSEP-SDW--------------KLGLDI 247 (332)
Q Consensus 184 G~~l~L~aa~~~A~~~vl~~~~~~~~~-~~~~~~~~~~~~g~i~l~~~~~~~~~~~-~~~--------------~~~~~~ 247 (332)
|..++..|-+.-|.-.+.|++.-|++. .+-...++.=.......+ +..++. ++| ...-+.
T Consensus 165 Gi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Fl----f~~~div~~~~~~~~se~~~~p~~g~~vP~ 240 (330)
T KOG1583|consen 165 GIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFL----FMGDDIVSHWRLAFKSESYLIPLLGFKVPS 240 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHH----HhcchHHHHHHHHhcCcceeccccCccccH
Confidence 999988888888888888877655542 344455665544443332 222210 011 000112
Q ss_pred hHHHHHHHhhHHHHHHHHHHhcc-------c-h--hhhhhchHHHHHHHHHHHHhCCccccchhh
Q 019995 248 GLVAVLYSVSSYWHWVSSWLVHM-------V-P--VENWTSLCINVQALGHCLLYCHGCRHCRRR 302 (332)
Q Consensus 248 ~~~~l~~~gt~i~~~l~~~~l~~-------~-~--~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~ 302 (332)
.|..++. ..+. |+.+++- . + ++....+--.+..+++.+.++.++++.|.+
T Consensus 241 ~~~yLl~--n~L~---Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~l 300 (330)
T KOG1583|consen 241 MWVYLLF--NVLT---QYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWL 300 (330)
T ss_pred HHHHHHH--HHHH---HHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHH
Confidence 3333322 2222 2222322 2 2 777777888999999999999999987766
No 85
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=94.38 E-value=0.54 Score=39.11 Aligned_cols=106 Identities=15% Similarity=0.151 Sum_probs=70.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccChhhHHHhhhhh-HHHHHH
Q 019995 40 NKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLI-PAFTFV 118 (332)
Q Consensus 40 ~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~~~~gl~~t~a~~asii~~~~-Pv~~~i 118 (332)
+|..-++.-+..+.+.+..+....+++..++.+...|+. ..=|++|...-.+.....+..+++.+..+.-+. -+...+
T Consensus 29 s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~-~lGG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~ 107 (138)
T PF04657_consen 29 SPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWA-YLGGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLL 107 (138)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHH-hccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Confidence 699999999999999888776665443222222223333 347788877888888899999988887765443 344444
Q ss_pred HHHH--HHhhccccccccccchhhhhhheeccce
Q 019995 119 LAII--FRLEKLNWENKSSQAKSLGTFASIGGAF 150 (332)
Q Consensus 119 la~l--~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ 150 (332)
+.++ +..|| ++.+..|.+|+++.++|+.
T Consensus 108 iD~fG~fg~~~----~~~~~~r~lG~~l~i~Gv~ 137 (138)
T PF04657_consen 108 IDHFGLFGAPK----RPFSLRRILGLALMIAGVI 137 (138)
T ss_pred HHHccccCCCC----CCCCHHHHHHHHHHHHHHh
Confidence 5552 22222 2344567999999999975
No 86
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=93.34 E-value=0.32 Score=46.76 Aligned_cols=138 Identities=10% Similarity=0.130 Sum_probs=98.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhCC---CChHHHHHHHHHHHHHHHHHHHHHhhcCCCCC---CCHHHHHHHHHHH
Q 019995 10 AALPSVGMVIVLLAQVSNMEVIKAAMSKG---INKYVIIVYSDALSSLFFLFCSFLFHRSERPQ---LTFSILCSFFLLS 83 (332)
Q Consensus 10 ~~~~~l~li~~~~iwg~~~v~~K~~~~~~---~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~---~~~~~~~~~~~~g 83 (332)
...+.++.+.+++.+|..-+..|.=.+++ .|.-.+-++=-++..++++|.......-..++ .+..+...++..+
T Consensus 245 ~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~~ 324 (416)
T KOG2765|consen 245 PLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFNN 324 (416)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHhh
Confidence 45678888899999999999999866543 45566666666777778887655543222221 2234455677889
Q ss_pred HHH-HHHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceeee
Q 019995 84 VFG-CSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (332)
Q Consensus 84 l~g-~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~ 153 (332)
+++ .+.-++|.+|.-.|++-.+++=.+++-....+.-.++.+.++ +...++|.+..+.|.+++.
T Consensus 325 ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~------S~~~iiGsi~Ifv~Fv~vn 389 (416)
T KOG2765|consen 325 LIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHP------SALYIIGSIPIFVGFVIVN 389 (416)
T ss_pred HHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCC------CHHHHHHHHHHHHHHhhee
Confidence 999 899999999999999999988766554445555555544444 4556999999999987765
No 87
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=92.23 E-value=0.86 Score=40.63 Aligned_cols=63 Identities=11% Similarity=0.101 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheecccee
Q 019995 83 SVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFV 151 (332)
Q Consensus 83 gl~g~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~l 151 (332)
.+.+...+.+..+-++|.++..-+....+.++++.+++.++++|+++..+ ++|..+.+.|+.+
T Consensus 159 ~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~------~~g~~lV~~~~~l 221 (222)
T TIGR00803 159 GLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTF------YLGAILVFLATFL 221 (222)
T ss_pred HHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHH------HHHHHHHHeeeEe
Confidence 34446777788899999999999999999999999999999999998764 8999999998753
No 88
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=90.89 E-value=1.4 Score=33.85 Aligned_cols=46 Identities=15% Similarity=0.175 Sum_probs=28.1
Q ss_pred hHHHHHHHHHHhccch----hhhhhchHHHHHHHHHHHHhCCccccchhh
Q 019995 257 SSYWHWVSSWLVHMVP----VENWTSLCINVQALGHCLLYCHGCRHCRRR 302 (332)
Q Consensus 257 t~i~~~l~~~~l~~~~----~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~ 302 (332)
-++++.++..++|+.| -+++.-+..+...+.|.+++||+++..+-.
T Consensus 39 ~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~ 88 (93)
T PF00893_consen 39 YGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWL 88 (93)
T ss_dssp HHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HH
T ss_pred HHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHh
Confidence 4588889999999995 356667888999999999999999987654
No 89
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=89.60 E-value=7.4 Score=32.30 Aligned_cols=102 Identities=11% Similarity=-0.032 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHcCCCCCccccchhhHHHHHHHh---hHHHH
Q 019995 185 GFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSV---SSYWH 261 (332)
Q Consensus 185 ~~l~L~aa~~~A~~~vl~~~~~~~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~g---t~i~~ 261 (332)
.++.+.+...-+....+..|+.++..+|...+++....|.+.+..+..+.++. +++......|+.. +| .+.--
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~--lGG~lG~~~V 78 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAY--LGGLLGVFFV 78 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHh--ccHHHHHHHH
Confidence 45677888888888888888888876689999999999999998877665542 2211111223332 23 44444
Q ss_pred HHHHHHhccc-h---hhhhhchHHHHHHHHHHH
Q 019995 262 WVSSWLVHMV-P---VENWTSLCINVQALGHCL 290 (332)
Q Consensus 262 ~l~~~~l~~~-~---~s~~~~l~Pv~a~il~~~ 290 (332)
....+..++. + +.....=|-+.+.+++.+
T Consensus 79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~f 111 (138)
T PF04657_consen 79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHF 111 (138)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 5566777777 4 333333455555555553
No 90
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=89.51 E-value=0.31 Score=44.06 Aligned_cols=71 Identities=18% Similarity=0.288 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheecccee
Q 019995 75 ILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFV 151 (332)
Q Consensus 75 ~~~~~~~~gl~g~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~l 151 (332)
.|..+..+|+.+.++|.+.+.-..+-+|-..+++..+--+|+.+.+.++++.+++.|| |+|..+.|.|...
T Consensus 240 ~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQ------wlgtvlVF~aL~~ 310 (337)
T KOG1580|consen 240 VFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQ------WLGTVLVFSALTA 310 (337)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHH------HHHHHHHHHHhhh
Confidence 3556678888889999999999999999999999999999999999999999998775 8999999998754
No 91
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=88.58 E-value=9.6 Score=32.20 Aligned_cols=54 Identities=17% Similarity=0.158 Sum_probs=44.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHcC
Q 019995 183 LGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVS 236 (332)
Q Consensus 183 ~G~~l~L~aa~~~A~~~vl~~~~~~~~~~~~~~~~~~~~~g~i~l~~~~~~~~~ 236 (332)
+..+..+.+..+-....-...|+.+...+|.......+.+|++.+..+....++
T Consensus 5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~ 58 (150)
T COG3238 5 LYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQG 58 (150)
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 456677888888888888888888877779999999999999999888876443
No 92
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=85.59 E-value=3.5 Score=38.90 Aligned_cols=110 Identities=9% Similarity=0.044 Sum_probs=68.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHcCCCCCccccchhhHHHHHHHhhHH
Q 019995 180 SWILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIVVSEPSDWKLGLDIGLVAVLYSVSSY 259 (332)
Q Consensus 180 ~~~~G~~l~L~aa~~~A~~~vl~~~~~~~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~gt~i 259 (332)
++..|..+.+.++++.+....+|||-.++.+. ... ... -+ ...+. . ...-|.+++. .++
T Consensus 4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~-~~~--~~~-~~-----~~~~l--------~--~~~W~~G~~~--~~~ 62 (300)
T PF05653_consen 4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPR-GSL--RAG-SG-----GRSYL--------R--RPLWWIGLLL--MVL 62 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccc--ccc-ch-----hhHHH--------h--hHHHHHHHHH--Hhc
Confidence 46789999999999999999999997655431 000 000 00 00110 0 0011223322 223
Q ss_pred HHHHHHHHhccch---hhhhhchHHHHHHHHHHHHhCCccccchhh---hhhheeee
Q 019995 260 WHWVSSWLVHMVP---VENWTSLCINVQALGHCLLYCHGCRHCRRR---FLSWKVLL 310 (332)
Q Consensus 260 ~~~l~~~~l~~~~---~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~---~~~~~~~~ 310 (332)
+..+...++...| ++++..+.-++.++++..++||+++..+.. +.+-|..+
T Consensus 63 g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~l 119 (300)
T PF05653_consen 63 GEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVL 119 (300)
T ss_pred chHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhhee
Confidence 4445555666664 788888888999999999999999976655 45556553
No 93
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=85.43 E-value=11 Score=31.80 Aligned_cols=137 Identities=8% Similarity=-0.012 Sum_probs=72.3
Q ss_pred hHHHHHHHHHHHHHHHHHH-HHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH
Q 019995 12 LPSVGMVIVLLAQVSNMEV-IKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQ 90 (332)
Q Consensus 12 ~~~l~li~~~~iwg~~~v~-~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~ 90 (332)
...+..+.+.++-.....+ .+++ +..-+|+.-...-+..+.+.+..+....+++.......+.=++...=|++|...-
T Consensus 5 l~ll~~i~aG~~l~~Q~~iN~qL~-~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa~~v 83 (150)
T COG3238 5 LYLLFAILAGALLPLQAAINGRLA-RYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGAIFV 83 (150)
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHH-HHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhhhhh
Confidence 3444444444444444443 4444 3323799999999999998888776663322211211111112234455554444
Q ss_pred HHHHHhhcccChhhHHHh-hhhhHHHHHHHHHH-HHhhccccccccccchhhhhhheeccceee
Q 019995 91 IFSFVGIQYSSPTLSTAM-LNLIPAFTFVLAII-FRLEKLNWENKSSQAKSLGTFASIGGAFVV 152 (332)
Q Consensus 91 ~~~~~gl~~t~a~~asii-~~~~Pv~~~ila~l-~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll 152 (332)
..-........++....+ ..-+-+...++..+ +++++ ++..+..|++|+++.++|+.++
T Consensus 84 t~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~---~~~~~~~r~lgi~L~l~gil~~ 144 (150)
T COG3238 84 TSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVP---KRPLNLPRILGILLVLAGILLA 144 (150)
T ss_pred hhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCC---cCCCCHHHHHHHHHHHHHHHHh
Confidence 444445555555554443 33333333333321 13332 2456778899999999996543
No 94
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=83.78 E-value=6.8 Score=37.01 Aligned_cols=135 Identities=18% Similarity=0.216 Sum_probs=91.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHHHhhc-C----CCC-CCCHHHHHHHHHHH
Q 019995 11 ALPSVGMVIVLLAQVSNMEVIKAAMSK-GINKYVIIVYSDALSSLFFLFCSFLFHR-S----ERP-QLTFSILCSFFLLS 83 (332)
Q Consensus 11 ~~~~l~li~~~~iwg~~~v~~K~~~~~-~~~p~~~~~~R~~~a~l~ll~~~~~~~~-~----~~~-~~~~~~~~~~~~~g 83 (332)
.++|.++....+.-+...+..|..++. +..-+.+..+.-+++.+.+....+...- + ..+ -....-+....+-+
T Consensus 156 ~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lSc 235 (314)
T KOG1444|consen 156 LRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSC 235 (314)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHH
Confidence 346777777777778888888887765 2566677888888887777665544211 0 000 01122244455566
Q ss_pred HHHHHHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheecccee
Q 019995 84 VFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFV 151 (332)
Q Consensus 84 l~g~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~l 151 (332)
+++.+-.++.++.-+..|+..-++.....=..+.+...++++++.++- ..+|+.++++|-++
T Consensus 236 v~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~------n~~gll~~~~ggv~ 297 (314)
T KOG1444|consen 236 VMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFL------NVIGLLVGFFGGVL 297 (314)
T ss_pred HHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechh------hhHHHHHHhhhhhH
Confidence 667778888889999999988888875555556666667777777654 59999999998754
No 95
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=81.44 E-value=0.6 Score=42.55 Aligned_cols=107 Identities=12% Similarity=0.095 Sum_probs=73.1
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccChhhHHHhhhhhHHHHH
Q 019995 38 GINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTF 117 (332)
Q Consensus 38 ~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ 117 (332)
+.+.+.--+.-+.++++.+- . +|..++.++.. ..-++-|++....+.+++.+-+....+++=.+.++..+...
T Consensus 178 g~saiLPqAiGMv~~ali~~----~--~~~~~~~~K~t-~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisT 250 (288)
T COG4975 178 GLSAILPQAIGMVIGALILG----F--FKMEKRFNKYT-WLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIIST 250 (288)
T ss_pred chhhhhHHHHHHHHHHHHHh----h--cccccchHHHH-HHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeee
Confidence 35555555555666665543 1 22122333333 34467788887888888888888777777777788888888
Q ss_pred HHHHHHHhhccccccccccchhhhhhheeccceeee
Q 019995 118 VLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (332)
Q Consensus 118 ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~ 153 (332)
+-+.+++|||=+.|++. .-++|+++-+.|+.++.
T Consensus 251 iGGIl~L~ekKtkkEm~--~v~iGiilivvgai~lg 284 (288)
T COG4975 251 IGGILFLGEKKTKKEMV--YVIIGIILIVVGAILLG 284 (288)
T ss_pred cceEEEEeccCchhhhh--hhhhhHHHHHHHhhhhh
Confidence 88899999998888753 35788888888876653
No 96
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=76.38 E-value=36 Score=32.22 Aligned_cols=132 Identities=16% Similarity=0.172 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-CCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCC-----CCCHHHHHHHHHHHHHH
Q 019995 13 PSVGMVIVLLAQVSNMEVIKAAMS-KGINKYVIIVYSDALSSLFFLFCSFLFHRSERP-----QLTFSILCSFFLLSVFG 86 (332)
Q Consensus 13 ~~l~li~~~~iwg~~~v~~K~~~~-~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~-----~~~~~~~~~~~~~gl~g 86 (332)
+++.+......=|.....-+...+ ..+++..+.+.--++.++.=... .+.+...++ +.+.+-+..+++...+|
T Consensus 173 G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~-li~qg~~~~av~F~~~hp~~~~Di~l~s~~g 251 (327)
T KOG1581|consen 173 GILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTY-LILQGHLLPAVSFIKEHPDVAFDILLYSTCG 251 (327)
T ss_pred hHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHh-hhcCCCCchHHHHHHcChhHHHHHHHHHHhh
Confidence 444444444433666665554443 24677877777666666654433 222222222 23345566788899999
Q ss_pred HHHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheecccee
Q 019995 87 CSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFV 151 (332)
Q Consensus 87 ~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~l 151 (332)
+.+|.+.+.-++.-++-.-+.|..+==++..+++.+.++.++++.| |.|+.+.|.|+.+
T Consensus 252 avGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q------~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 252 AVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQ------WLGVLIVFGGIFL 310 (327)
T ss_pred hhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhh------ccCeeeehHHHHH
Confidence 9999988888888777777777777888899999999999998775 7888888888754
No 97
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=74.74 E-value=11 Score=34.16 Aligned_cols=104 Identities=16% Similarity=0.185 Sum_probs=77.2
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhcCCCC----CCCHHHHHHHHHHHHHHHHHHHHHHHhhcccChhhHHHhhhhhHH
Q 019995 39 INKYVIIVYSDALSSLFFLFCSFLFHRSERP----QLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPA 114 (332)
Q Consensus 39 ~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~----~~~~~~~~~~~~~gl~g~~~~~~~~~gl~~t~a~~asii~~~~Pv 114 (332)
...+.-.++.-.++..+++.+.+..+-+... ..+...+...++-|+...+.-++--|.++-++++.-+...++.-.
T Consensus 183 f~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKl 262 (309)
T COG5070 183 FKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKL 262 (309)
T ss_pred cchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhC
Confidence 5667788888999999998888776432211 233344456666777766677788889999999999999998888
Q ss_pred HHHHHHHHHHhhccccccccccchhhhhhheecc
Q 019995 115 FTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGG 148 (332)
Q Consensus 115 ~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~G 148 (332)
-.++.+.++++|+.|+. ++..+.+|+..
T Consensus 263 p~alaGlvffdap~nf~------si~sillGfls 290 (309)
T COG5070 263 PIALAGLVFFDAPVNFL------SIFSILLGFLS 290 (309)
T ss_pred hHHHhhhhhcCCchhHH------HHHHHHHHHHH
Confidence 88888999999998864 36666666543
No 98
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=69.35 E-value=24 Score=33.09 Aligned_cols=136 Identities=14% Similarity=0.167 Sum_probs=89.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHH-HHHHHhCCCChHHHHHHHHHHHHHH----HHHHHHHhhcCC---CCCCCHHHHHHH--
Q 019995 10 AALPSVGMVIVLLAQVSNMEV-IKAAMSKGINKYVIIVYSDALSSLF----FLFCSFLFHRSE---RPQLTFSILCSF-- 79 (332)
Q Consensus 10 ~~~~~l~li~~~~iwg~~~v~-~K~~~~~~~~p~~~~~~R~~~a~l~----ll~~~~~~~~~~---~~~~~~~~~~~~-- 79 (332)
-..+.++.++++++-+..++. -|....++.+|...+++.-+++.++ ..|..+....+. .++-.+.+|...
T Consensus 174 iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~ 253 (372)
T KOG3912|consen 174 IITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFA 253 (372)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHH
Confidence 456788899999999999988 5666666799999999998888544 334443321211 234445555422
Q ss_pred -------HHHHHHH-HHHHHH-HHHhh---cccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheec
Q 019995 80 -------FLLSVFG-CSSQIF-SFVGI---QYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIG 147 (332)
Q Consensus 80 -------~~~gl~g-~~~~~~-~~~gl---~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~ 147 (332)
+.+++.+ .....+ .+.|+ ++.++++=.++=.+=-.++.+++.....|++..- ++.|-++-..
T Consensus 254 ~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~ll------qilGFliLi~ 327 (372)
T KOG3912|consen 254 ALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLL------QILGFLILIM 327 (372)
T ss_pred HhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHH------HHHHHHHHHH
Confidence 2333333 222222 22333 3457777777777777888888988999999765 4899998888
Q ss_pred ccee
Q 019995 148 GAFV 151 (332)
Q Consensus 148 Gv~l 151 (332)
|+++
T Consensus 328 Gi~l 331 (372)
T KOG3912|consen 328 GIIL 331 (372)
T ss_pred HHHH
Confidence 8764
No 99
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=68.97 E-value=74 Score=29.30 Aligned_cols=133 Identities=12% Similarity=0.044 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 019995 14 SVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFS 93 (332)
Q Consensus 14 ~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~~ 93 (332)
+++.+++.+.+|++++-.|.- +. -|++.+-.+-.....+.=+.+... +. .++.. ...++-|.+.+..+.+-
T Consensus 2 ~~a~~va~~~fGs~~vPvK~~-~~-gDg~~fQw~~~~~i~~~g~~v~~~--~~-~p~f~----p~amlgG~lW~~gN~~~ 72 (254)
T PF07857_consen 2 YIACIVAVLFFGSNFVPVKKF-DT-GDGFFFQWVMCSGIFLVGLVVNLI--LG-FPPFY----PWAMLGGALWATGNILV 72 (254)
T ss_pred chhHHHHHHHhcccceeeEec-cC-CCcHHHHHHHHHHHHHHHHHHHHh--cC-CCcce----eHHHhhhhhhhcCceee
Confidence 567788999999999999973 44 577655444433332222222222 21 22322 22344455556777777
Q ss_pred HHhhcccChhhHHHhhhhhHHHH-HHHHHH-HHhhccccccccccchhhhhhheeccceeeeecC
Q 019995 94 FVGIQYSSPTLSTAMLNLIPAFT-FVLAII-FRLEKLNWENKSSQAKSLGTFASIGGAFVVTFYK 156 (332)
Q Consensus 94 ~~gl~~t~a~~asii~~~~Pv~~-~ila~l-~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~ 156 (332)
.-.++...-+.+-.+-++.-+++ ...+.+ +++++...- +.....++|++++++|..+..+-+
T Consensus 73 vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~-~~~~Ln~~G~~l~~~~~~~f~fik 136 (254)
T PF07857_consen 73 VPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVP-SSPWLNYIGVALVLVSGIIFSFIK 136 (254)
T ss_pred hhHhhhhhhHHHHHHHHHHHHHHHHHHhhceecccccccc-chhHHHHHHHHHHHHHHHheeeec
Confidence 78888888888888877644433 333322 333332221 123456999999999998876644
No 100
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=63.00 E-value=1.2e+02 Score=27.56 Aligned_cols=121 Identities=10% Similarity=0.041 Sum_probs=76.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhh-cCC-CCCCCHHHHHHHHHHHHHH-H
Q 019995 11 ALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFH-RSE-RPQLTFSILCSFFLLSVFG-C 87 (332)
Q Consensus 11 ~~~~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~-~~~-~~~~~~~~~~~~~~~gl~g-~ 87 (332)
..+.++.+.++++=|...+..-..+.++-.++..--.+..+.++++.......+ ++. +.+--.+.+-.....-++. +
T Consensus 113 ~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~~~~~i~~~a 192 (244)
T PF04142_consen 113 LLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWWVWIVIFLQA 192 (244)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchHHHHHHHHHH
Confidence 446667777778888888888666776556777777776555555444433221 111 1111112221222222222 5
Q ss_pred HHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccc
Q 019995 88 SSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWE 131 (332)
Q Consensus 88 ~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~ 131 (332)
..-+..-.-++|.+.-.=+.-.+..-+++.+++..+++.+++..
T Consensus 193 ~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~ 236 (244)
T PF04142_consen 193 IGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLS 236 (244)
T ss_pred HhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchH
Confidence 55566667789998888888888888999999999999988753
No 101
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=62.73 E-value=9.6 Score=32.53 Aligned_cols=29 Identities=17% Similarity=0.119 Sum_probs=22.3
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 019995 180 SWILGGFFLAAEAFMNSAWFILQALILRK 208 (332)
Q Consensus 180 ~~~~G~~l~L~aa~~~A~~~vl~~~~~~~ 208 (332)
++.......+.+++.|++.+++..-+.++
T Consensus 129 ~f~qsv~~gf~a~lGfslvmvlfA~iRER 157 (193)
T COG4657 129 NFLQSVVYGFGAALGFSLVMVLFAAIRER 157 (193)
T ss_pred hHHHHHHHHhhhHhhHHHHHHHHHHHHHH
Confidence 45667888899999999999887665444
No 102
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=48.52 E-value=71 Score=25.42 Aligned_cols=118 Identities=16% Similarity=0.102 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 019995 14 SVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQIFS 93 (332)
Q Consensus 14 ~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~~ 93 (332)
...++.+.++||..++++|.+-. +++..--.. |-..- .+++-| .+ .-.|-+.+... ++-....+|
T Consensus 5 ~~~lvaVgllWG~Tnplirrgs~-g~~~v~~~~-~k~~~--------~lqe~~---tl-~l~w~Y~iPFl-lNqcgSaly 69 (125)
T KOG4831|consen 5 MDKLVAVGLLWGATNPLIRRGSL-GWDKVKSSS-RKIMI--------ALQEMK---TL-FLNWEYLIPFL-LNQCGSALY 69 (125)
T ss_pred HHHHHHHHHHHccccHHHHHHHh-hHhhccCch-HHHHH--------HHHHHH---HH-HHhHHHHHHHH-HHHhhHHHH
Confidence 34578899999999999998743 343221110 10000 001100 00 01122333322 223445567
Q ss_pred HHhhcccChhhHHHhh-hhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceee
Q 019995 94 FVGIQYSSPTLSTAML-NLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVV 152 (332)
Q Consensus 94 ~~gl~~t~a~~asii~-~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll 152 (332)
|+-++.++-+.|.=+. +++-.|+++.+..+ +|+...++ ..+|..+.++|+.+.
T Consensus 70 ~~tLa~a~islavpv~nsltfafta~~G~~L-GE~~~g~~-----a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 70 YLTLASAPISLAVPVTNSLTFAFTAIFGKAL-GEETQGGL-----ALLGTSLIVFGIWLC 123 (125)
T ss_pred HHHHhcCCceeeeeecchhHHHHHHHHHHHh-ccccccce-----eehhhhHHhhhhhhe
Confidence 7778888777765554 35566777777666 66665442 478888888887553
No 103
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=40.88 E-value=1.2e+02 Score=29.17 Aligned_cols=112 Identities=10% Similarity=0.045 Sum_probs=64.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHH-cCCCCC-ccccchhhHHHHHHHh--
Q 019995 181 WILGGFFLAAEAFMNSAWFILQALILRKFAAVLIIMFYLFFFNTILSTAFALIV-VSEPSD-WKLGLDIGLVAVLYSV-- 256 (332)
Q Consensus 181 ~~~G~~l~L~aa~~~A~~~vl~~~~~~~~~~~~~~~~~~~~~g~i~l~~~~~~~-~~~~~~-~~~~~~~~~~~l~~~g-- 256 (332)
-+.|+++..++++|-+.+.+=.||. |+.+ -++.=..|.+++-+..-.+.-.. .++..+ ....+...+......|
T Consensus 5 ii~Gii~h~iGg~~~~sfy~P~kkv-k~Ws-WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~l 82 (344)
T PF06379_consen 5 IILGIIFHAIGGFASGSFYVPFKKV-KGWS-WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGVL 82 (344)
T ss_pred HHHHHHHHHHHHHHhhhhccchhhc-CCcc-HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHHH
Confidence 4789999999999999998877774 7774 55555556666666554333222 222111 0111111222222233
Q ss_pred hHHHHHHHHHHhccc--h--hhhhhchHHHHHHHHHHHHhCC
Q 019995 257 SSYWHWVSSWLVHMV--P--VENWTSLCINVQALGHCLLYCH 294 (332)
Q Consensus 257 t~i~~~l~~~~l~~~--~--~s~~~~l~Pv~a~il~~~~LgE 294 (332)
=+++-..|..++|+. + .++..-+.-+++.++--++.|+
T Consensus 83 WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~ 124 (344)
T PF06379_consen 83 WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGT 124 (344)
T ss_pred HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCc
Confidence 335555666777777 4 5566666667777776665543
No 104
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=39.91 E-value=45 Score=31.21 Aligned_cols=108 Identities=13% Similarity=0.164 Sum_probs=76.6
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhcCC---C---CCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccChhhHHHhhhhh
Q 019995 39 INKYVIIVYSDALSSLFFLFCSFLFHRSE---R---PQLTFSILCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLI 112 (332)
Q Consensus 39 ~~p~~~~~~R~~~a~l~ll~~~~~~~~~~---~---~~~~~~~~~~~~~~gl~g~~~~~~~~~gl~~t~a~~asii~~~~ 112 (332)
.+...++++.+.++.++++...... ... + .+.+.+...+.++.++.+++++.+...-++.-++..++.+...=
T Consensus 218 ~ss~EmvfySy~iG~vflf~~mvlT-ge~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaR 296 (367)
T KOG1582|consen 218 ASSSEMVFYSYGIGFVFLFAPMVLT-GELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTAR 296 (367)
T ss_pred CCcceEEEeeecccHHHHHHHHHhc-ccchhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhH
Confidence 4556677777788888777655442 111 1 13455666777788888877766666666767888888888888
Q ss_pred HHHHHHHHHHHHhhccccccccccchhhhhhheeccceeee
Q 019995 113 PAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVVT 153 (332)
Q Consensus 113 Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll~ 153 (332)
-..|.+++.+++.++++... .-|.++.+.|+.+=.
T Consensus 297 KavTi~lSfllFsKPfT~qy------~~~gllv~lgI~Ln~ 331 (367)
T KOG1582|consen 297 KAVTILLSFLLFSKPFTEQY------VWSGLLVVLGIYLNM 331 (367)
T ss_pred hHHHHHHHHHHHcCchHHHH------hhhhHHHHHHHHhhc
Confidence 89999999999999998653 456667788887643
No 105
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=33.93 E-value=1.9e+02 Score=29.32 Aligned_cols=48 Identities=2% Similarity=-0.090 Sum_probs=29.8
Q ss_pred HHHhhhhhHHHHHHHHHHH--Hhhcccc-ccccccchhhhhhheeccceee
Q 019995 105 STAMLNLIPAFTFVLAIIF--RLEKLNW-ENKSSQAKSLGTFASIGGAFVV 152 (332)
Q Consensus 105 asii~~~~Pv~~~ila~l~--~~E~l~~-~~~~~~~k~iGi~l~~~Gv~ll 152 (332)
++-+++..|+++.+++.++ .-.|+.+ ++.++..+..++.+.++|+..+
T Consensus 310 ~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~ 360 (493)
T PRK15462 310 TAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFC 360 (493)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHH
Confidence 6778899999988877543 2233322 2335555666666666666554
No 106
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=33.88 E-value=4.3e+02 Score=25.28 Aligned_cols=133 Identities=18% Similarity=0.083 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCC----CChHHHHHHHHHHHHHHHHHHHHHhhcCCCC-------CCCHH-HHHHHH
Q 019995 13 PSVGMVIVLLAQVSNMEVIKAAMSKG----INKYVIIVYSDALSSLFFLFCSFLFHRSERP-------QLTFS-ILCSFF 80 (332)
Q Consensus 13 ~~l~li~~~~iwg~~~v~~K~~~~~~----~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~-------~~~~~-~~~~~~ 80 (332)
+......+.++=|.-+.+.+..++.+ -+|+.....-.-...+.++|.....++-.+- ..... .+....
T Consensus 165 Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g 244 (349)
T KOG1443|consen 165 GFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIG 244 (349)
T ss_pred hHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHH
Confidence 34444455555566667777666652 1466666555556666667766665542211 11111 112222
Q ss_pred HHHHHHHHHHH---HHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheecccee
Q 019995 81 LLSVFGCSSQI---FSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFV 151 (332)
Q Consensus 81 ~~gl~g~~~~~---~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~l 151 (332)
.+++.|...+. +-+.=+..|+.-..++..---=+.+.+++..+.+|+++.- .|.|..++..|+..
T Consensus 245 ~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~l------N~~Gl~i~~agi~~ 312 (349)
T KOG1443|consen 245 LISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLL------NWLGLAICLAGILL 312 (349)
T ss_pred HHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhh------HHHHHHHHHHHHHH
Confidence 33333422222 2222344455555555555556788899999999998744 49999999999865
No 107
>COG1968 BacA Undecaprenyl pyrophosphate phosphatase [Lipid transport and metabolism]
Probab=27.25 E-value=5.1e+02 Score=24.10 Aligned_cols=113 Identities=11% Similarity=0.098 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH--
Q 019995 13 PSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFGCSSQ-- 90 (332)
Q Consensus 13 ~~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~-- 90 (332)
-.+..+++.+-=+......|...+..+.....++.-....+++++..-...++.+.+..+.-.++..+.+|+.+++.-
T Consensus 86 l~l~ilvatiPa~v~Gl~~~d~i~~~l~~~~~va~~lIv~gi~li~~e~~~~~~~~~~~~~l~~~da~~IGlaQ~lAl~P 165 (270)
T COG1968 86 LWLKILVATIPAVVLGLLFKDFIKSHLFNPRVVAIALIVGGILLILAEKLNKKPRLRDLDDLTLRDALIIGLAQCLALIP 165 (270)
T ss_pred HHHHHHHHHHhHHHhhHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHhccccCcCChhhCCHHHHHHHHHHHHHHHcC
Confidence 345555555555566666665555544445566666666666665433222110111222222345567777774432
Q ss_pred ----------HHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhh
Q 019995 91 ----------IFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLE 126 (332)
Q Consensus 91 ----------~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E 126 (332)
.....|++.-.|..-|.+.+ .|.+.--.+.=+.|+
T Consensus 166 G~SRSGaTI~~~lllG~~r~~AaefSFlLa-IP~m~GA~~l~l~k~ 210 (270)
T COG1968 166 GTSRSGATISGGLLLGLSREAAAEFSFLLA-IPAMFGASALDLFKS 210 (270)
T ss_pred CCCccHHHHHHHHHcCCCHHHHHHHHHHHH-HHHHHHHHHHHHHhh
Confidence 34555666556655555544 454433333333443
No 108
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=26.85 E-value=86 Score=27.94 Aligned_cols=55 Identities=2% Similarity=-0.062 Sum_probs=43.0
Q ss_pred HHHHHHHHHhccc-h--hhhhhchHHHHHHHHHHHHhCCccccchhh---hhhheeeeeee
Q 019995 259 YWHWVSSWLVHMV-P--VENWTSLCINVQALGHCLLYCHGCRHCRRR---FLSWKVLLINF 313 (332)
Q Consensus 259 i~~~l~~~~l~~~-~--~s~~~~l~Pv~a~il~~~~LgE~~~~~~~~---~~~~~~~~~~~ 313 (332)
.+.++|..++++. | ++....-.-.+.-+++|+.||+++..-+-. .-+.|++.+-.
T Consensus 65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay 125 (290)
T KOG4314|consen 65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAY 125 (290)
T ss_pred cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEe
Confidence 3567788999999 6 777777788899999999999998765544 46778776654
No 109
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=26.16 E-value=4.5e+02 Score=23.03 Aligned_cols=45 Identities=22% Similarity=0.346 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHH
Q 019995 76 LCSFFLLSVFGCSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIF 123 (332)
Q Consensus 76 ~~~~~~~gl~g~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~ 123 (332)
+.+.+..++......+..+......++..- ..+.|....+++.+.
T Consensus 146 ~~k~~~~~~~~~~~w~~~~~~~~~lp~~in---p~l~~~~~iiig~i~ 190 (206)
T PF06570_consen 146 WWKYILISVLAMVLWIVIFVLTSFLPPVIN---PVLPPWVYIIIGVIA 190 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccccCC---cCCCHHHHHHHHHHH
Confidence 333344444443333333334343554422 223444444444433
No 110
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=25.48 E-value=1.1e+02 Score=28.53 Aligned_cols=136 Identities=9% Similarity=0.060 Sum_probs=80.4
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH
Q 019995 7 SMRAALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG 86 (332)
Q Consensus 7 ~~~~~~~~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g 86 (332)
.+...++-..++..+.++|.+++.-...... .|...+...--++++++-..- ...++++...+.+..-....+...+.
T Consensus 161 gsnp~~GD~lvi~GATlYaVSNv~EEflvkn-~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~w~~~i~~yl~f~L~ 238 (336)
T KOG2766|consen 161 GSNPVKGDFLVIAGATLYAVSNVSEEFLVKN-ADRVELMGFLGLFGAIISAIQ-FIFERHHVSTLHWDSAIFLYLRFALT 238 (336)
T ss_pred CCCCccCcEEEEecceeeeeccccHHHHHhc-CcHHHHHHHHHHHHHHHHHHH-HhhhccceeeEeehHHHHHHHHHHHH
Confidence 3445667778888899999999988877654 898988888888888876554 45566554455443111111222222
Q ss_pred -HHHHHHHHHhhcccChhhHHHhhhhhHHHHHHHHHHHHhhccccccccccchhhhhhheeccceee
Q 019995 87 -CSSQIFSFVGIQYSSPTLSTAMLNLIPAFTFVLAIIFRLEKLNWENKSSQAKSLGTFASIGGAFVV 152 (332)
Q Consensus 87 -~~~~~~~~~gl~~t~a~~asii~~~~Pv~~~ila~l~~~E~l~~~~~~~~~k~iGi~l~~~Gv~ll 152 (332)
++.+-+.-.=++..+++.-.+-.-++-+|..++ .. ++-++.|- -.++-.....|..+-
T Consensus 239 MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i-~~-FgYhv~wL------Y~laF~~i~~GliiY 297 (336)
T KOG2766|consen 239 MFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI-RT-FGYHVDWL------YFLAFATIATGLIIY 297 (336)
T ss_pred HHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH-HH-Hhcchhhh------hHHHHHHHHHhhEEe
Confidence 333333334456666665544444556666555 33 34445442 256666677777553
No 111
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=25.04 E-value=6.3e+02 Score=24.39 Aligned_cols=277 Identities=13% Similarity=0.042 Sum_probs=145.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHh--hcCC---CCCCCHHHHHHHHHHHH
Q 019995 10 AALPSVGMVIVLLAQVSNMEVIKAAMSKGINKYVIIVYSDALSSLFFLFCSFLF--HRSE---RPQLTFSILCSFFLLSV 84 (332)
Q Consensus 10 ~~~~~l~li~~~~iwg~~~v~~K~~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~--~~~~---~~~~~~~~~~~~~~~gl 84 (332)
-..+.+.-.+..+.=|+.++-.|..-+-....+.++ ...++ -++.|..... -++. -...+.+.+....+.|+
T Consensus 5 ii~Gii~h~iGg~~~~sfy~P~kkvk~WsWEs~Wlv--~gi~s-wli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~ 81 (344)
T PF06379_consen 5 IILGIIFHAIGGFASGSFYVPFKKVKGWSWESYWLV--QGIFS-WLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGV 81 (344)
T ss_pred HHHHHHHHHHHHHHhhhhccchhhcCCccHHHHHHH--HHHHH-HHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence 345677777888888999999998533223333333 33443 3344543332 1111 12334456667777888
Q ss_pred HHHHHHHHHHHhhcccChhhHH-HhhhhhHHHHHHHHHHHHhh--ccccccccccchhhhhhheeccceeeeecCCCCCc
Q 019995 85 FGCSSQIFSFVGIQYSSPTLST-AMLNLIPAFTFVLAIIFRLE--KLNWENKSSQAKSLGTFASIGGAFVVTFYKGPPLI 161 (332)
Q Consensus 85 ~g~~~~~~~~~gl~~t~a~~as-ii~~~~Pv~~~ila~l~~~E--~l~~~~~~~~~k~iGi~l~~~Gv~ll~~~~g~~~~ 161 (332)
+-.+....|=.+++|...+... +...+.-++-.++-.++.++ .+. .+...+.-.+|++++++|+.+... .|. .
T Consensus 82 lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~-~~~~g~~vL~Gv~v~LiGIai~g~-AG~-~- 157 (344)
T PF06379_consen 82 LWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELL-ATPSGQIVLLGVAVCLIGIAICGK-AGS-M- 157 (344)
T ss_pred HHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccc-cCCCchhhhhHHHHHHHHHHHHhH-HHH-h-
Confidence 7766667777888888766643 33445545555444444321 111 112345679999999999988642 121 0
Q ss_pred CCCCCCCCCCc-ccCCCCccchhHHHHHHHHHHHHHHHHHHHHHH-------HHhcchhHHH----HHHHHHHHHHHHHH
Q 019995 162 GELSHSGSPRR-LLLSPQLSWILGGFFLAAEAFMNSAWFILQALI-------LRKFAAVLII----MFYLFFFNTILSTA 229 (332)
Q Consensus 162 ~~~~~~~~~~~-~~~~~~~~~~~G~~l~L~aa~~~A~~~vl~~~~-------~~~~~~~~~~----~~~~~~~g~i~l~~ 229 (332)
+ +++ ++...+.+.-.|.+.++.|.+.-|++..-...- .+.-.+|... ....+.-|.+..+.
T Consensus 158 ----K---e~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~~ 230 (344)
T PF06379_consen 158 ----K---EKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNLI 230 (344)
T ss_pred ----h---hhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHHH
Confidence 0 001 111223455689999999999988887753321 1100012211 22223344555555
Q ss_pred HHHHHc---CCCCCccc-c-chhhH-HHHHHHh-h----HHHHHHHHHHhccc-h------hhhhhchHHHHHHHHHHHH
Q 019995 230 FALIVV---SEPSDWKL-G-LDIGL-VAVLYSV-S----SYWHWVSSWLVHMV-P------VENWTSLCINVQALGHCLL 291 (332)
Q Consensus 230 ~~~~~~---~~~~~~~~-~-~~~~~-~~l~~~g-t----~i~~~l~~~~l~~~-~------~s~~~~l~Pv~a~il~~~~ 291 (332)
.++... ++.+.+.. . ....+ -..+++. + -.++..|.++-.+. + -..+..+.-+++-++|. +
T Consensus 231 yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl-~ 309 (344)
T PF06379_consen 231 YCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVLWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGL-I 309 (344)
T ss_pred HHHHHHhhcCCCccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHH-H
Confidence 554431 11111111 0 00111 1122222 1 23334444554544 2 34667778899999996 5
Q ss_pred hCCccccchh
Q 019995 292 YCHGCRHCRR 301 (332)
Q Consensus 292 LgE~~~~~~~ 301 (332)
++|-=...+|
T Consensus 310 lkEWKg~s~k 319 (344)
T PF06379_consen 310 LKEWKGASKK 319 (344)
T ss_pred HHHhccCCcc
Confidence 9998777654
No 112
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=24.03 E-value=3.2e+02 Score=20.67 Aligned_cols=56 Identities=23% Similarity=0.276 Sum_probs=34.4
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHhhcccC
Q 019995 38 GINKYVIIVYSDALSSLFFLFCSFLFHRSERPQLTFSILCSFFLLSVFG-CSSQIFSFVGIQYSS 101 (332)
Q Consensus 38 ~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~gl~g-~~~~~~~~~gl~~t~ 101 (332)
+.+|..+.+.=..++++.+... |+.+|+.++++= +..+.+| ...-++++.|-+..+
T Consensus 4 ~~~~~~iLgi~l~~~~~~Ly~l-----r~~~Pev~Rd~D---~~fs~vgLl~g~IL~~~gwRldp 60 (84)
T PF07444_consen 4 GFGPSYILGIILILGGLALYFL-----RFFRPEVSRDYD---IFFSSVGLLYGLILWFQGWRLDP 60 (84)
T ss_pred ccCHHHHHHHHHHHHHHHHHHH-----HHHCcchhhhhh---HHHHHHHHHHHHHHHHHhhcccH
Confidence 4788888888888888776532 223344443321 2334444 556677788888766
No 113
>CHL00196 psbY photosystem II protein Y; Provisional
Probab=23.41 E-value=1.8e+02 Score=18.31 Aligned_cols=20 Identities=15% Similarity=-0.250 Sum_probs=16.4
Q ss_pred hHHHHHHHHHHHHHHHHHHH
Q 019995 183 LGGFFLAAEAFMNSAWFILQ 202 (332)
Q Consensus 183 ~G~~l~L~aa~~~A~~~vl~ 202 (332)
+=++..++.|.+||+|++..
T Consensus 6 liVl~Pil~A~~Wa~fNIg~ 25 (36)
T CHL00196 6 LVIAAPVLAAASWALFNIGR 25 (36)
T ss_pred HHHHHHHHHHHHHHHHHhHH
Confidence 34678899999999999863
Done!