Query 019997
Match_columns 332
No_of_seqs 274 out of 2408
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 10:13:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019997.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019997hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lhh_A CBS domain protein; str 100.0 3.3E-28 1.1E-32 211.2 12.6 139 64-208 5-144 (172)
2 3oi8_A Uncharacterized protein 99.9 7.8E-27 2.7E-31 199.2 14.6 138 65-208 2-140 (156)
3 3ocm_A Putative membrane prote 99.9 6.9E-26 2.4E-30 198.0 13.5 124 82-208 13-137 (173)
4 3lv9_A Putative transporter; C 99.9 1.6E-25 5.6E-30 188.4 11.9 123 84-208 2-125 (148)
5 3oco_A Hemolysin-like protein 99.9 4.9E-25 1.7E-29 187.0 7.1 119 88-208 3-123 (153)
6 3lfr_A Putative metal ION tran 99.9 1.1E-22 3.8E-27 169.4 11.3 103 104-208 2-107 (136)
7 3jtf_A Magnesium and cobalt ef 99.9 3.6E-22 1.2E-26 164.6 13.4 105 102-208 2-106 (129)
8 3hf7_A Uncharacterized CBS-dom 99.9 2.7E-22 9.4E-27 165.9 10.7 103 104-208 1-107 (130)
9 3kxr_A Magnesium transporter, 99.9 4.5E-21 1.5E-25 172.1 18.6 127 66-208 25-154 (205)
10 3i8n_A Uncharacterized protein 99.9 4.4E-22 1.5E-26 164.0 8.9 106 101-208 2-109 (130)
11 3k6e_A CBS domain protein; str 99.9 1E-21 3.6E-26 168.6 10.2 110 95-208 4-122 (156)
12 3nqr_A Magnesium and cobalt ef 99.9 2.7E-21 9.2E-26 158.7 12.0 103 104-208 2-106 (127)
13 4esy_A CBS domain containing m 99.8 7.8E-21 2.7E-25 163.9 12.8 111 92-208 7-143 (170)
14 2yvy_A MGTE, Mg2+ transporter 99.8 7.8E-20 2.7E-24 170.6 14.3 137 66-208 91-237 (278)
15 2zy9_A Mg2+ transporter MGTE; 99.8 4.3E-19 1.5E-23 178.2 16.8 134 65-208 110-257 (473)
16 2oux_A Magnesium transporter; 99.8 1.7E-18 5.8E-23 162.7 16.2 117 86-208 118-239 (286)
17 4gqw_A CBS domain-containing p 99.8 1.4E-18 4.9E-23 144.7 12.6 104 103-208 3-123 (152)
18 2emq_A Hypothetical conserved 99.8 1.9E-18 6.4E-23 145.8 12.5 109 96-208 2-119 (157)
19 3kpb_A Uncharacterized protein 99.8 9.8E-19 3.3E-23 141.2 10.0 100 105-208 1-100 (122)
20 3lqn_A CBS domain protein; csg 99.8 1.2E-18 4E-23 146.1 10.5 106 99-208 9-123 (150)
21 3ctu_A CBS domain protein; str 99.8 9.4E-19 3.2E-23 147.9 9.7 109 96-208 6-122 (156)
22 3gby_A Uncharacterized protein 99.8 3.2E-18 1.1E-22 140.2 12.4 101 103-208 3-106 (128)
23 2ef7_A Hypothetical protein ST 99.8 6.2E-18 2.1E-22 138.7 12.5 102 102-208 1-105 (133)
24 3sl7_A CBS domain-containing p 99.8 3.2E-18 1.1E-22 147.0 11.2 103 104-208 3-136 (180)
25 2yzi_A Hypothetical protein PH 99.8 1.5E-17 5.2E-22 137.2 14.4 104 100-208 2-109 (138)
26 2qrd_G Protein C1556.08C; AMPK 99.8 3.8E-18 1.3E-22 161.0 12.0 125 87-212 3-151 (334)
27 3k2v_A Putative D-arabinose 5- 99.7 3.3E-18 1.1E-22 143.9 9.5 102 105-208 28-133 (149)
28 2rc3_A CBS domain; in SITU pro 99.7 9E-18 3.1E-22 138.3 12.0 100 106-208 7-112 (135)
29 3fhm_A Uncharacterized protein 99.7 6.5E-18 2.2E-22 144.6 10.2 110 97-208 16-131 (165)
30 2p9m_A Hypothetical protein MJ 99.7 2.5E-17 8.6E-22 135.7 12.5 103 102-208 5-116 (138)
31 2rih_A Conserved protein with 99.7 1.9E-17 6.4E-22 137.6 11.7 99 105-208 5-108 (141)
32 2j9l_A Chloride channel protei 99.7 2.7E-17 9.2E-22 142.0 12.0 105 103-208 9-146 (185)
33 3fv6_A YQZB protein; CBS domai 99.7 4.1E-17 1.4E-21 138.8 12.9 103 102-209 14-122 (159)
34 1yav_A Hypothetical protein BS 99.7 1.7E-17 5.7E-22 140.8 10.3 105 100-208 9-122 (159)
35 1pbj_A Hypothetical protein; s 99.7 2.5E-17 8.5E-22 133.2 10.8 99 105-208 1-103 (125)
36 2pfi_A Chloride channel protei 99.7 2.4E-17 8.2E-22 139.4 11.1 109 97-208 5-128 (164)
37 1o50_A CBS domain-containing p 99.7 4E-17 1.4E-21 138.4 12.3 102 101-208 12-133 (157)
38 2v8q_E 5'-AMP-activated protei 99.7 8E-18 2.7E-22 158.8 8.4 123 83-208 15-156 (330)
39 4fry_A Putative signal-transdu 99.7 4.9E-17 1.7E-21 137.4 11.8 101 105-208 7-116 (157)
40 3t4n_C Nuclear protein SNF4; C 99.7 1.2E-17 4.2E-22 156.8 8.7 128 84-212 8-156 (323)
41 2o16_A Acetoin utilization pro 99.7 5.3E-17 1.8E-21 138.4 11.7 102 103-208 3-116 (160)
42 1y5h_A Hypothetical protein RV 99.7 2.4E-17 8.1E-22 135.2 8.9 102 103-208 6-112 (133)
43 2nyc_A Nuclear protein SNF4; b 99.7 4.6E-17 1.6E-21 134.5 10.7 103 102-208 5-121 (144)
44 1pvm_A Conserved hypothetical 99.7 7E-17 2.4E-21 140.7 11.6 100 105-208 9-113 (184)
45 2uv4_A 5'-AMP-activated protei 99.7 1.6E-16 5.6E-21 133.9 10.8 102 101-208 19-131 (152)
46 1vr9_A CBS domain protein/ACT 99.6 1.8E-15 6.2E-20 135.6 14.5 100 103-208 11-110 (213)
47 1zfj_A Inosine monophosphate d 99.6 1.2E-15 4.2E-20 153.2 14.4 131 65-208 54-191 (491)
48 3ddj_A CBS domain-containing p 99.6 8.9E-16 3E-20 142.4 12.4 129 65-208 64-194 (296)
49 3kh5_A Protein MJ1225; AMPK, A 99.6 3.5E-15 1.2E-19 136.2 13.8 100 106-208 4-122 (280)
50 3t4n_C Nuclear protein SNF4; C 99.6 2.1E-15 7.3E-20 141.5 12.1 104 101-208 183-300 (323)
51 3usb_A Inosine-5'-monophosphat 99.6 4.1E-15 1.4E-19 150.8 14.8 131 65-208 77-214 (511)
52 3kh5_A Protein MJ1225; AMPK, A 99.6 3E-15 1E-19 136.6 12.2 133 65-208 51-186 (280)
53 3ddj_A CBS domain-containing p 99.6 2.1E-15 7.3E-20 139.8 10.0 103 102-208 153-265 (296)
54 3org_A CMCLC; transporter, tra 99.6 6.6E-16 2.2E-20 160.1 7.2 104 103-208 451-606 (632)
55 4fxs_A Inosine-5'-monophosphat 99.6 3.8E-16 1.3E-20 157.8 5.0 132 64-209 52-190 (496)
56 3pc3_A CG1753, isoform A; CBS, 99.6 3.7E-15 1.3E-19 151.2 11.6 103 102-209 381-488 (527)
57 2d4z_A Chloride channel protei 99.6 5.2E-15 1.8E-19 137.2 11.4 60 101-163 9-69 (250)
58 3l2b_A Probable manganase-depe 99.6 2.6E-15 9E-20 136.4 9.2 101 104-208 6-224 (245)
59 2yzq_A Putative uncharacterize 99.6 1E-14 3.4E-19 133.7 11.4 102 103-208 124-259 (282)
60 2yzq_A Putative uncharacterize 99.5 7E-15 2.4E-19 134.8 8.6 98 105-208 1-98 (282)
61 1me8_A Inosine-5'-monophosphat 99.5 1.4E-15 4.8E-20 153.8 2.8 132 65-209 61-202 (503)
62 2qrd_G Protein C1556.08C; AMPK 99.5 4.8E-14 1.6E-18 132.9 12.7 102 103-208 180-295 (334)
63 2cu0_A Inosine-5'-monophosphat 99.5 2.7E-15 9.2E-20 151.0 2.6 130 65-211 57-191 (486)
64 4avf_A Inosine-5'-monophosphat 99.5 2.3E-15 7.9E-20 151.9 2.0 131 64-209 51-188 (490)
65 2v8q_E 5'-AMP-activated protei 99.5 2.1E-13 7.1E-18 128.4 12.6 101 105-208 190-303 (330)
66 1vrd_A Inosine-5'-monophosphat 99.3 2.2E-13 7.7E-18 137.0 2.0 111 88-208 82-195 (494)
67 4af0_A Inosine-5'-monophosphat 99.2 1.7E-12 5.8E-17 131.0 1.8 110 90-209 128-239 (556)
68 1jcn_A Inosine monophosphate d 99.2 7.3E-13 2.5E-17 134.0 -3.7 107 106-215 109-220 (514)
69 3ghd_A A cystathionine beta-sy 98.9 6.3E-09 2.2E-13 77.8 7.5 65 116-183 1-70 (70)
70 3fio_A A cystathionine beta-sy 98.7 2.9E-08 9.8E-13 72.2 7.5 64 117-183 2-70 (70)
71 1vr9_A CBS domain protein/ACT 98.7 1.4E-08 4.7E-13 90.6 4.7 104 104-212 71-175 (213)
72 4esy_A CBS domain containing m 98.4 2.1E-07 7.3E-12 79.3 4.6 40 169-208 17-56 (170)
73 4fry_A Putative signal-transdu 98.2 1E-06 3.5E-11 73.6 5.5 59 102-165 75-133 (157)
74 3ghd_A A cystathionine beta-sy 98.2 2.3E-06 7.8E-11 63.7 6.7 29 180-208 2-30 (70)
75 3kpb_A Uncharacterized protein 98.2 2.4E-06 8.2E-11 67.9 7.0 59 103-165 60-118 (122)
76 3l2b_A Probable manganase-depe 98.2 2.7E-06 9.2E-11 76.6 7.9 40 169-208 6-45 (245)
77 1pbj_A Hypothetical protein; s 98.2 1.3E-06 4.6E-11 69.5 5.3 60 101-165 61-120 (125)
78 3fv6_A YQZB protein; CBS domai 98.2 2.3E-06 7.8E-11 71.9 6.5 62 101-164 77-141 (159)
79 3lhh_A CBS domain protein; str 98.1 7.2E-06 2.5E-10 70.0 8.8 72 86-164 90-161 (172)
80 2rc3_A CBS domain; in SITU pro 98.1 4.2E-06 1.4E-10 67.9 6.9 59 102-165 71-129 (135)
81 2ef7_A Hypothetical protein ST 98.1 3.1E-06 1.1E-10 68.4 5.8 59 103-165 65-123 (133)
82 3lv9_A Putative transporter; C 98.1 6.4E-06 2.2E-10 68.1 7.8 72 86-164 71-142 (148)
83 3fio_A A cystathionine beta-sy 98.1 5.9E-06 2E-10 59.7 6.7 30 179-208 1-30 (70)
84 3k2v_A Putative D-arabinose 5- 98.1 5.9E-06 2E-10 68.5 7.4 39 170-208 28-68 (149)
85 1pvm_A Conserved hypothetical 98.1 7.9E-06 2.7E-10 70.3 8.4 61 102-166 72-132 (184)
86 3oco_A Hemolysin-like protein 98.1 5.6E-06 1.9E-10 69.1 7.1 73 86-165 69-141 (153)
87 3lfr_A Putative metal ION tran 98.1 4.9E-06 1.7E-10 68.1 6.7 59 102-165 67-125 (136)
88 3fhm_A Uncharacterized protein 98.1 5.8E-06 2E-10 69.8 7.2 61 101-166 89-149 (165)
89 3gby_A Uncharacterized protein 98.1 3.3E-06 1.1E-10 68.1 5.4 40 169-208 4-43 (128)
90 2rih_A Conserved protein with 98.1 1.2E-05 4E-10 65.8 8.8 57 103-164 69-125 (141)
91 4gqw_A CBS domain-containing p 98.1 2.6E-06 9E-11 69.9 4.8 60 102-165 82-141 (152)
92 2yzi_A Hypothetical protein PH 98.1 7.7E-06 2.6E-10 66.4 7.3 39 170-208 7-45 (138)
93 1y5h_A Hypothetical protein RV 98.1 3.9E-06 1.3E-10 67.8 5.4 59 102-165 71-129 (133)
94 3jtf_A Magnesium and cobalt ef 98.1 5.6E-06 1.9E-10 67.0 6.2 57 103-164 67-123 (129)
95 2o16_A Acetoin utilization pro 98.0 7.9E-06 2.7E-10 68.7 7.0 39 170-208 5-43 (160)
96 3sl7_A CBS domain-containing p 98.0 4.8E-06 1.6E-10 70.5 5.6 60 101-164 94-153 (180)
97 3ctu_A CBS domain protein; str 98.0 7.8E-06 2.7E-10 68.0 6.7 39 170-208 15-55 (156)
98 2nyc_A Nuclear protein SNF4; b 98.0 8.2E-06 2.8E-10 66.4 6.6 61 102-164 74-138 (144)
99 2p9m_A Hypothetical protein MJ 98.0 1.1E-05 3.7E-10 65.4 7.1 39 170-208 8-46 (138)
100 1o50_A CBS domain-containing p 98.0 7.3E-06 2.5E-10 68.5 6.2 60 101-165 92-151 (157)
101 3i8n_A Uncharacterized protein 98.0 1.2E-05 4E-10 65.1 7.1 57 103-164 70-126 (130)
102 2uv4_A 5'-AMP-activated protei 98.0 1.4E-05 5E-10 66.3 7.7 60 103-164 85-148 (152)
103 3nqr_A Magnesium and cobalt ef 98.0 7.5E-06 2.6E-10 66.0 5.7 58 103-165 67-124 (127)
104 3lqn_A CBS domain protein; csg 98.0 1.2E-05 4.2E-10 66.3 6.8 58 102-165 84-141 (150)
105 3hf7_A Uncharacterized CBS-dom 98.0 1.1E-05 3.6E-10 65.7 6.1 57 103-164 68-124 (130)
106 3kxr_A Magnesium transporter, 97.9 9.6E-06 3.3E-10 72.0 6.1 60 102-165 113-172 (205)
107 2pfi_A Chloride channel protei 97.9 1.4E-05 4.6E-10 66.6 6.7 40 169-208 12-51 (164)
108 3k6e_A CBS domain protein; str 97.9 1.2E-05 4.2E-10 68.0 6.2 38 171-208 16-55 (156)
109 2d4z_A Chloride channel protei 97.9 1.6E-05 5.5E-10 73.2 7.4 40 169-208 12-51 (250)
110 3oi8_A Uncharacterized protein 97.9 1.1E-05 3.9E-10 67.6 5.8 55 103-162 101-155 (156)
111 2emq_A Hypothetical conserved 97.9 1.7E-05 6E-10 65.7 6.3 40 169-208 10-51 (157)
112 1yav_A Hypothetical protein BS 97.9 1.7E-05 5.7E-10 66.3 5.8 39 170-208 14-54 (159)
113 2j9l_A Chloride channel protei 97.9 1.7E-05 5.8E-10 67.5 6.0 58 102-164 105-162 (185)
114 1me8_A Inosine-5'-monophosphat 97.8 1E-05 3.5E-10 81.6 4.3 100 103-206 159-260 (503)
115 3usb_A Inosine-5'-monophosphat 97.8 6.3E-05 2.2E-09 76.0 9.9 107 101-211 171-279 (511)
116 3ocm_A Putative membrane prote 97.8 4.8E-05 1.6E-09 65.4 7.2 40 169-208 35-76 (173)
117 2yvy_A MGTE, Mg2+ transporter 97.7 3E-05 1E-09 71.5 5.7 61 102-166 196-256 (278)
118 2oux_A Magnesium transporter; 97.6 3.9E-05 1.3E-09 71.4 5.2 60 102-165 198-257 (286)
119 3pc3_A CG1753, isoform A; CBS, 97.5 0.00013 4.5E-09 73.6 6.5 39 170-208 384-423 (527)
120 2zy9_A Mg2+ transporter MGTE; 97.4 0.00015 5.1E-09 72.5 5.9 60 102-165 216-275 (473)
121 4avf_A Inosine-5'-monophosphat 97.4 0.00013 4.5E-09 73.3 5.1 99 103-204 145-245 (490)
122 3org_A CMCLC; transporter, tra 97.4 0.00016 5.6E-09 74.7 5.7 56 106-166 569-624 (632)
123 1vrd_A Inosine-5'-monophosphat 97.1 0.00025 8.7E-09 70.9 4.2 100 103-206 153-255 (494)
124 4fxs_A Inosine-5'-monophosphat 97.1 0.0002 7E-09 72.0 3.3 61 103-165 147-207 (496)
125 4af0_A Inosine-5'-monophosphat 97.1 0.00014 5E-09 73.5 1.8 99 103-208 198-300 (556)
126 2cu0_A Inosine-5'-monophosphat 97.0 0.00057 2E-08 68.4 5.5 98 103-208 148-247 (486)
127 1jcn_A Inosine monophosphate d 96.9 0.00045 1.5E-08 69.5 3.2 61 103-165 171-231 (514)
128 1zfj_A Inosine monophosphate d 96.9 0.0038 1.3E-07 62.2 9.9 100 103-206 150-251 (491)
No 1
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.95 E-value=3.3e-28 Score=211.22 Aligned_cols=139 Identities=24% Similarity=0.462 Sum_probs=92.5
Q ss_pred cccCHHHHHHHHHhhccccccCCCCCHHHHHHHHHHhcCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEE
Q 019997 64 ALFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVP 143 (332)
Q Consensus 64 ~~ls~eEL~~lv~~~~~e~~e~G~L~~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriP 143 (332)
..+|++||+.+++ ++.+.|.++++|++++++++.|...+|+++|+|+.+++++++++|+. ++++.|.+++++++|
T Consensus 5 ~~~t~~el~~l~~----~~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~p 79 (172)
T 3lhh_A 5 DNVTQEDIQAMLQ----EGSSAGVIEHNEHAMVKNVFRLDERTISSLMVPRSDIVFLDLNLPLD-ANLRTVMQSPHSRFP 79 (172)
T ss_dssp ------------------------------------------CTTTTSEEGGGCCCEETTSCHH-HHHHHHHTCCCSEEE
T ss_pred ccCCHHHHHHHHH----HHHHcCCCCHHHHHHHHHHhccCCCCHHHhCccHHHeEEEcCCCCHH-HHHHHHHhCCCCEEE
Confidence 4689999999998 45567999999999999999999999999999888999999999998 999999999999999
Q ss_pred EEecCCCcEEEEEEhhhHhccCCc-cccccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 144 VYYEEPTNIIGLILVKNLLTIHPE-DEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 144 Vvd~~~~~ivGIVt~rDLl~~~~~-~~~~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
|++++.++++|+|+.+|++.+... ...+++++| +++++|++++++.+|++.|.+++.+.+||+|
T Consensus 80 Vvd~~~~~lvGivt~~dl~~~~~~~~~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd 144 (172)
T 3lhh_A 80 VCRNNVDDMVGIISAKQLLSESIAGERLELVDLV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVD 144 (172)
T ss_dssp EESSSTTSEEEEEEHHHHHHHHHTTCCCCGGGGC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEEC
T ss_pred EEeCCCCeEEEEEEHHHHHHHHhhcCcccHHHHh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEe
Confidence 998543799999999999875432 256899998 9999999999999999999999999999999
No 2
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.94 E-value=7.8e-27 Score=199.23 Aligned_cols=138 Identities=23% Similarity=0.386 Sum_probs=125.8
Q ss_pred ccCHHHHHHHHHhhccccccCCCCCHHHHHHHHHHhcCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEE
Q 019997 65 LFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPV 144 (332)
Q Consensus 65 ~ls~eEL~~lv~~~~~e~~e~G~L~~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPV 144 (332)
.+|++||+.+++. +.++|.++.+|++++++++.|.+.+|+++|+|+.+++++++++|+. ++++.|.+++++++||
T Consensus 2 ~~t~~el~~li~~----~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~i~-~a~~~m~~~~~~~~pV 76 (156)
T 3oi8_A 2 NASAEDVLNLLRQ----AHEQEVFDADTLLRLEKVLDFSDLEVRDAMITRSRMNVLKENDSIE-RITAYVIDTAHSRFPV 76 (156)
T ss_dssp CCCHHHHHHHHHH----HHHTTSSCHHHHHHHHHHHHHTTCBGGGTCEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEE
T ss_pred CCCHHHHHHHHHh----HHhcCCcCHHHHHHHHHHhccCCCCHhheeeeHHHeEEECCCCCHH-HHHHHHHHCCCCEEEE
Confidence 3799999999984 4567999999999999999999999999999988899999999998 9999999999999999
Q ss_pred EecCCCcEEEEEEhhhHhccCCc-cccccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 145 YYEEPTNIIGLILVKNLLTIHPE-DEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 145 vd~~~~~ivGIVt~rDLl~~~~~-~~~~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
++++.++++|+|+.+|++.+... ...++.++| +++++|++++++.+|++.|.+++.+.+||+|
T Consensus 77 vd~~~~~lvGivt~~dl~~~~~~~~~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd 140 (156)
T 3oi8_A 77 IGEDKDEVLGILHAKDLLKYMFNPEQFHLKSIL-RPAVFVPEGKSLTALLKEFREQRNHMAIVID 140 (156)
T ss_dssp ESSSTTCEEEEEEGGGGGGGSSCGGGCCHHHHC-BCCCEEETTSBHHHHHHHHHHTTCCEEEEEC
T ss_pred EcCCCCcEEEEEEHHHHHHHHHcCCcccHHHHc-CCCEEECCCCCHHHHHHHHHhcCCeEEEEEC
Confidence 98554699999999999987544 456899996 6789999999999999999999999999999
No 3
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.93 E-value=6.9e-26 Score=197.95 Aligned_cols=124 Identities=17% Similarity=0.288 Sum_probs=109.1
Q ss_pred cccCCCCCHHHHHHHHHHhcCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhH
Q 019997 82 AGKGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNL 161 (332)
Q Consensus 82 ~~e~G~L~~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDL 161 (332)
+.++|.|+++|++++++++.|.+.+|+++|+|+.+++++++++|+. ++++.|.+++++++||++++.++++|+|+.+||
T Consensus 13 ~~~~g~l~~~e~~~i~~~l~l~~~~v~diM~~~~~v~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl 91 (173)
T 3ocm_A 13 MPAVPAFGVEERNMVSGVLTLAERSIRSIMTPRTDVSWVNIDDDAA-TIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDL 91 (173)
T ss_dssp -----CCCHHHHHHHHHHHHHTTSCSTTTSEEGGGCCCEETTSCHH-HHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHH
T ss_pred HHhcCCcCHHHHHHHHHHhccCCCCHHHhCCcHHHeEEEeCCCCHH-HHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHH
Confidence 4467999999999999999999999999999988899999999998 999999999999999998554799999999999
Q ss_pred hccCCc-cccccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 162 LTIHPE-DEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 162 l~~~~~-~~~~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
+.+... ...++. |++++++|++++++.+|++.|.+++.+++||+|
T Consensus 92 ~~~~~~~~~~~v~--~~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvd 137 (173)
T 3ocm_A 92 VADLITEGRVRRN--RLRDPIIVHESIGILRLMDTLKRSRGQLVLVAD 137 (173)
T ss_dssp HHHHHHHSSCCGG--GSBCCCEECGGGCHHHHHHHHHHSTTCCEEEEC
T ss_pred HHHHhcCCcchhH--hcCCCeEECCCCcHHHHHHHHHHcCCeEEEEEe
Confidence 875322 245677 579999999999999999999999999999999
No 4
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.93 E-value=1.6e-25 Score=188.38 Aligned_cols=123 Identities=20% Similarity=0.434 Sum_probs=98.5
Q ss_pred cCCCCCHHHHHHHHHHhcCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhc
Q 019997 84 KGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLT 163 (332)
Q Consensus 84 e~G~L~~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~ 163 (332)
++|.|+++|++++++++.+.+.+|+++|+|+.+++++++++|+. ++++.|.+++++++||++++.|+++|+|+.+|++.
T Consensus 2 ~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~ 80 (148)
T 3lv9_A 2 NAGLIDESEQRLVDNIFEFEEKKIREIMVPRTDMVCIYESDSEE-KILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYN 80 (148)
T ss_dssp ----------------CGGGTCBGGGTSEETTTCCCEETTCCHH-HHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHH
T ss_pred CCCccCHHHHHHHHHHhccCCCCHHHccccHHHeEEECCCCCHH-HHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHH
Confidence 35899999999999999999999999999988899999999998 99999999999999999854379999999999987
Q ss_pred cCCcc-ccccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 164 IHPED-EVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 164 ~~~~~-~~~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
..... ..++.++| ++++++++++++.+|++.|.+++.+.+||+|
T Consensus 81 ~~~~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd 125 (148)
T 3lv9_A 81 QKINENKIELEEIL-RDIIYISENLTIDKALERIRKEKLQLAIVVD 125 (148)
T ss_dssp HHHHHSCCCGGGTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred HHhcCCCccHHHhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEe
Confidence 53322 57899998 9999999999999999999999999999999
No 5
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.91 E-value=4.9e-25 Score=186.97 Aligned_cols=119 Identities=24% Similarity=0.418 Sum_probs=104.4
Q ss_pred CCHHHHHHHHHHhcCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEE-ecCCCcEEEEEEhhhHhccCC
Q 019997 88 LTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVY-YEEPTNIIGLILVKNLLTIHP 166 (332)
Q Consensus 88 L~~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVv-d~~~~~ivGIVt~rDLl~~~~ 166 (332)
|+++|++++++++.|.+.+|+++|+|+.+++++++++|+. ++++.|.+++++++||+ +++.|+++|+|+.+|++.+..
T Consensus 3 l~~~e~~~i~~~~~l~~~~v~~iM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~ 81 (153)
T 3oco_A 3 ADEEDANFMQRAFEMNDKVASDVMVDRTSMSVVDVDETIA-DALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQAR 81 (153)
T ss_dssp -----CCHHHHHHHHHHCBHHHHSEEGGGCCCEETTSBHH-HHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHH
T ss_pred cCHHHHHHHHHhcccCCCEeeeEecchhheEEEcCCCCHH-HHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHh
Confidence 6788999999999999999999999988899999999998 99999999999999999 544479999999999987532
Q ss_pred c-cccccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 167 E-DEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 167 ~-~~~~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
. ...+++++| ++++++++++++.+|++.|.+++.+.+||+|
T Consensus 82 ~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd 123 (153)
T 3oco_A 82 IDDKAKISTIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVID 123 (153)
T ss_dssp HHTTSBGGGTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEEC
T ss_pred cCCCCcHHHHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEe
Confidence 2 256899998 9999999999999999999999999999999
No 6
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.88 E-value=1.1e-22 Score=169.35 Aligned_cols=103 Identities=31% Similarity=0.519 Sum_probs=92.2
Q ss_pred ccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCC---ccccccccccccCC
Q 019997 104 EKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP---EDEVPVKSVTIRRI 180 (332)
Q Consensus 104 ~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~---~~~~~V~dim~r~v 180 (332)
+.+|+++|+|+.+++++++++|+. ++++.|.+++++++||++++.++++|+|+.+|++++.. ....+++++| +++
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~~v~~~m-~~~ 79 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPR-EFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKADGDSDDVKKLL-RPA 79 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSSGGGCCGGGTC-BCC
T ss_pred CCChHhccccHHHEEEEcCCCCHH-HHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhccCCCcCHHHHc-CCC
Confidence 678999999988899999999998 99999999999999999854379999999999997643 2346899996 668
Q ss_pred ceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 181 PRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 181 ~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
+++++++++.+|++.|.+++.+.+||+|
T Consensus 80 ~~v~~~~~l~~~~~~m~~~~~~~~~Vvd 107 (136)
T 3lfr_A 80 TFVPESKRLNVLLREFRANHNHMAIVID 107 (136)
T ss_dssp CEEETTCBHHHHHHHHHHHTCCEEEEEC
T ss_pred eEECCCCcHHHHHHHHHhcCCeEEEEEe
Confidence 9999999999999999999999999999
No 7
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.88 E-value=3.6e-22 Score=164.60 Aligned_cols=105 Identities=35% Similarity=0.587 Sum_probs=94.5
Q ss_pred CcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCCccccccccccccCCc
Q 019997 102 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIP 181 (332)
Q Consensus 102 l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~~~~~~V~dim~r~v~ 181 (332)
..+.+|+++|+|+.+++++++++|+. ++++.|.+++++++||++++.++++|+|+.+|++++......+++++| ++++
T Consensus 2 ~~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~v~~~m-~~~~ 79 (129)
T 3jtf_A 2 NAERTVADIMVPRSRMDLLDISQPLP-QLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLEPALDIRSLV-RPAV 79 (129)
T ss_dssp --CCBHHHHCEEGGGCCCEETTSCHH-HHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTCTTSCGGGGC-BCCC
T ss_pred CCCCCHHHhCccHHHeEEECCCCCHH-HHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhccCCcCHHHHh-CCCe
Confidence 46789999999988899999999998 999999999999999998544799999999999987555567899996 6789
Q ss_pred eeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 182 RVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 182 ~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
++++++++.+|++.|.+++.+.+||+|
T Consensus 80 ~v~~~~~l~~~~~~m~~~~~~~~pVvd 106 (129)
T 3jtf_A 80 FIPEVKRLNVLLREFRASRNHLAIVID 106 (129)
T ss_dssp EEETTCBHHHHHHHHHTSSCCEEEEEC
T ss_pred EeCCCCcHHHHHHHHHhcCCeEEEEEe
Confidence 999999999999999999999999999
No 8
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.87 E-value=2.7e-22 Score=165.94 Aligned_cols=103 Identities=24% Similarity=0.396 Sum_probs=92.4
Q ss_pred ccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCCcc----ccccccccccC
Q 019997 104 EKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPED----EVPVKSVTIRR 179 (332)
Q Consensus 104 ~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~~~----~~~V~dim~r~ 179 (332)
+++|+++|+|+.+++++++++|+. ++++.|.+++++++||++++.++++|+|+.+|++++...+ ..++.++| ++
T Consensus 1 ~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~~~~~~v~~~m-~~ 78 (130)
T 3hf7_A 1 KVSVNDIMVPRNEIVGIDINDDWK-SIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKEFTKEIMLRAA-DE 78 (130)
T ss_dssp CCBHHHHSEEGGGCCEEETTSCHH-HHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSCCCHHHHHHHS-BC
T ss_pred CcCHHHhCccHHHEEEEcCCCCHH-HHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCccchhhHHHhc-cC
Confidence 368999999988899999999998 9999999999999999975557999999999998754332 24688986 88
Q ss_pred CceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 180 IPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 180 v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
++++++++++.+|++.|.+++.+.+||+|
T Consensus 79 ~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd 107 (130)
T 3hf7_A 79 IYFVPEGTPLSTQLVKFQRNKKKVGLVVD 107 (130)
T ss_dssp CCEEETTCBHHHHHHHHHHHCCCEEEEEC
T ss_pred CeEeCCCCcHHHHHHHHHhcCCeEEEEEc
Confidence 99999999999999999999999999999
No 9
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.87 E-value=4.5e-21 Score=172.14 Aligned_cols=127 Identities=7% Similarity=0.089 Sum_probs=113.9
Q ss_pred cCHHHHHHHHHhhccccccCCCCCHHHHHHHHHHhcCcccccccccccCcceEEEcCCCCHHHHHHHHHHHc---CCcEE
Q 019997 66 FRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEK---GHSRV 142 (332)
Q Consensus 66 ls~eEL~~lv~~~~~e~~e~G~L~~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~---~~Sri 142 (332)
+..++...++. .+++++++++++++.+++.+|+++|++ +++++++++|+. ++++.|.++ +++.+
T Consensus 25 l~~~~~~~~l~----------~l~~~e~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-eal~~~~~~~~~~~~~~ 91 (205)
T 3kxr_A 25 LPESFTDRALA----------QMGERQRQRFELYDQYSENEIGRYTDH--QMLVLSDKATVA-QAQRFFRRIELDCNDNL 91 (205)
T ss_dssp SCHHHHHHHHH----------HSCHHHHHHHHHHHHSCTTCGGGGCBC--CCCEEETTCBHH-HHHHHHHHCCCTTCCEE
T ss_pred CCHHHHHHHHH----------cCCHHHHHHHHHHhCCCcchHHhhccC--ceEEECCCCcHH-HHHHHHHhhCccCeeEE
Confidence 45566666665 379999999999999999999999997 788999999998 999999987 88999
Q ss_pred EEEecCCCcEEEEEEhhhHhccCCccccccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 143 PVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 143 PVvd~~~~~ivGIVt~rDLl~~~~~~~~~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
||++ +.++++|+|+.+|++.... ..+++++|.+++++|++++++.+|++.|.+++.+.+||+|
T Consensus 92 ~Vvd-~~~~lvGivt~~dll~~~~--~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD 154 (205)
T 3kxr_A 92 FIVD-EADKYLGTVRRYDIFKHEP--HEPLISLLSEDSRALTANTTLLDAAEAIEHSREIELPVID 154 (205)
T ss_dssp EEEC-TTCBEEEEEEHHHHTTSCT--TSBGGGGCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEEC
T ss_pred EEEc-CCCeEEEEEEHHHHHhCCC--cchHHHHhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEc
Confidence 9998 4579999999999987543 4679999989999999999999999999999999999999
No 10
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.86 E-value=4.4e-22 Score=164.01 Aligned_cols=106 Identities=23% Similarity=0.371 Sum_probs=91.6
Q ss_pred cCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCCc--ccccccccccc
Q 019997 101 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE--DEVPVKSVTIR 178 (332)
Q Consensus 101 ~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~~--~~~~V~dim~r 178 (332)
+|.+.+|+++|+|+.+++++++++|+. ++++.|.+++++++||++++.++++|+|+.+|++..... ...+++++| +
T Consensus 2 ~l~~~~v~~iM~~~~~v~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~~~v~~~m-~ 79 (130)
T 3i8n_A 2 NAQDVPVTQVMTPRPVVFRVDATMTIN-EFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGSGQKQLGAVM-R 79 (130)
T ss_dssp -----CCTTTSCCBCCCCEEETTSBHH-HHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTTTTSBHHHHS-E
T ss_pred CcCcCCHhhCCCcHHHEEEEcCCCCHH-HHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCCCcCCHHHHh-c
Confidence 468899999999988889999999998 999999999999999998544799999999999875322 246799997 7
Q ss_pred CCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 179 RIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 179 ~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
+++++++++++.+|++.|.+++.+.+||+|
T Consensus 80 ~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd 109 (130)
T 3i8n_A 80 PIQVVLNNTALPKVFDQMMTHRLQLALVVD 109 (130)
T ss_dssp ECCEEETTSCHHHHHHHHHHHTCCEEEEEC
T ss_pred CCcCcCCCCcHHHHHHHHHHcCCeEEEEEc
Confidence 889999999999999999999999999999
No 11
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.86 E-value=1e-21 Score=168.64 Aligned_cols=110 Identities=17% Similarity=0.258 Sum_probs=93.9
Q ss_pred HHHHHh-cCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCCc------
Q 019997 95 IIAGAL-ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE------ 167 (332)
Q Consensus 95 ~I~~vl-~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~~------ 167 (332)
|+.+.+ +|-..+++++|+|+.+++++++++|+. ++++.|.+++++++||+| +.++++|+|+.+|++++...
T Consensus 4 mi~~~~e~~l~~~~~~iM~P~~~v~~v~~~~t~~-~a~~~m~~~~~s~~pVvd-~~~~lvGiit~~Di~~~~~~~~~~~~ 81 (156)
T 3k6e_A 4 MIAKEFETFLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYTRVPVVT-DEKQFVGTIGLRDIMAYQMEHDLSQE 81 (156)
T ss_dssp HHHHHHHHHHHTTGGGGEEETTSSCCEETTSBHH-HHHHHHTTSSSSEEEEEC-C-CBEEEEEEHHHHHHHHHHHTCCHH
T ss_pred hHHHHHHHHhhccHHHhCcchhHeEEECCcCCHH-HHHHHHHHcCCcEEEEEc-CCCcEEEEEEecchhhhhhhcccccc
Confidence 444444 355668999999999999999999998 999999999999999998 45799999999999764211
Q ss_pred --cccccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 168 --DEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 168 --~~~~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
...++.++|.++++++++++++.+|++.|.+++ ++||+|
T Consensus 82 ~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd 122 (156)
T 3k6e_A 82 IMADTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVD 122 (156)
T ss_dssp HHTTSBGGGTCBCSCCCBCTTCCHHHHHHHTTTSS--EEEEEC
T ss_pred cccccCHHHhhcCCceecccccHHHHHHHHHHHcC--CeEEEe
Confidence 246899999999999999999999999998764 699999
No 12
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.86 E-value=2.7e-21 Score=158.67 Aligned_cols=103 Identities=31% Similarity=0.550 Sum_probs=91.6
Q ss_pred ccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCC--ccccccccccccCCc
Q 019997 104 EKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP--EDEVPVKSVTIRRIP 181 (332)
Q Consensus 104 ~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~--~~~~~V~dim~r~v~ 181 (332)
+.+|+++|+|+.+++++++++|+. ++++.|.+++++++||++++.|+++|+|+.+|+++... ....+++++| ++++
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~v~~~m-~~~~ 79 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLD-ECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVL-RTAV 79 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTTCCCCCHHHHC-BCCC
T ss_pred CcCHHHhcccHHHeEEEcCCCCHH-HHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhccCCCCCHHHHc-CCCe
Confidence 578999999877789999999998 99999999999999999854379999999999997542 2356899996 6688
Q ss_pred eeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 182 RVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 182 ~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
++++++++.+|++.|.+++.+.+||+|
T Consensus 80 ~v~~~~~l~~a~~~m~~~~~~~lpVvd 106 (127)
T 3nqr_A 80 VVPESKRVDRMLKEFRSQRYHMAIVID 106 (127)
T ss_dssp EEETTCBHHHHHHHHHHTTCCEEEEEC
T ss_pred EECCCCcHHHHHHHHHhcCCeEEEEEe
Confidence 999999999999999999999999999
No 13
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.84 E-value=7.8e-21 Score=163.88 Aligned_cols=111 Identities=17% Similarity=0.243 Sum_probs=96.0
Q ss_pred HHHHHHHHhcCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCCc----
Q 019997 92 ETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE---- 167 (332)
Q Consensus 92 E~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~~---- 167 (332)
++..+.+. +.+++|+|+|++ +++++++++|+. ++++.|.+++++++||+|+ +|+++|+|+.+|+++....
T Consensus 7 ~~~~~~~~--l~~~~V~diM~~--~v~~v~~~~tl~-~a~~~m~~~~~~~~pVvd~-~g~lvGiit~~Dll~~~~~~~~~ 80 (170)
T 4esy_A 7 RRRAIARA--IRQVPIRDILTS--PVVTVREDDTLD-AVAKTMLEHQIGCAPVVDQ-NGHLVGIITESDFLRGSIPFWIY 80 (170)
T ss_dssp HHHHHHHH--HHTSBGGGGCCS--CCCCEETTSBHH-HHHHHHHHTTCSEEEEECT-TSCEEEEEEGGGGGGGTCCTTHH
T ss_pred HHHHHHHH--HcCCCHHHhcCC--CCcEECCcCcHH-HHHHHHHHcCCeEEEEEcC-CccEEEEEEHHHHHHHHhhcccc
Confidence 34444444 468899999986 788999999998 9999999999999999984 5799999999999874321
Q ss_pred ----------------------cccccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 168 ----------------------DEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 168 ----------------------~~~~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
...+++++|.+++++|++++++.+|++.|.+++.+.+||+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd 143 (170)
T 4esy_A 81 EASEILSRAIPAPEVEHLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ 143 (170)
T ss_dssp HHHHHHTTTSCHHHHHHHHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE
T ss_pred chhhhhhhccchhhHHhhhccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE
Confidence 12478899999999999999999999999999999999999
No 14
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.82 E-value=7.8e-20 Score=170.58 Aligned_cols=137 Identities=15% Similarity=0.145 Sum_probs=116.3
Q ss_pred cCHHHHHHHHHhhccc---ccc--CCCCCHHHHHHHHHHhcCcccccccccccCcceEEEcCCCCHHHHHHHHHHHc---
Q 019997 66 FRRAELKTLVNLHGNE---AGK--GGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEK--- 137 (332)
Q Consensus 66 ls~eEL~~lv~~~~~e---~~e--~G~L~~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~--- 137 (332)
++.+++..+++....+ ..+ -|.++..++..+.+++.+.+.+|+++|++ +++++++++|+. ++++.|.++
T Consensus 91 l~~d~~~~ll~~l~~~~~~~~~~ll~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~~~~ 167 (278)
T 2yvy_A 91 LSLDDLADALQAVRKEDPAYFQRLKDLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLRRAAPD 167 (278)
T ss_dssp SCHHHHHHHHHHHHHHCHHHHHHHHHHSCHHHHHHHHHHHHSCTTBGGGTCBS--CCCEECTTSBHH-HHHHHHHHHTTT
T ss_pred CCHHHHHHHHHhCCCccHHHHHHHHHcCCHHHHHHHHHHHCCCcchHHhhcCC--CceEECCCCcHH-HHHHHHHHccCC
Confidence 5666666666532111 000 15789999999999999999999999997 788999999998 999999987
Q ss_pred --CCcEEEEEecCCCcEEEEEEhhhHhccCCccccccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 138 --GHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 138 --~~SriPVvd~~~~~ivGIVt~rDLl~~~~~~~~~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
+++++||+++ .++++|+|+.+|++... ...+++++|.+++++|++++++.+|++.|++++.+.+||+|
T Consensus 168 ~~~~~~~~Vvd~-~~~lvGivt~~dll~~~--~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 237 (278)
T 2yvy_A 168 AETIYYIYVVDE-KGRLKGVLSLRDLIVAD--PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVD 237 (278)
T ss_dssp CSCSSEEEEECT-TCBEEEEEEHHHHHHSC--TTCBSTTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred ccceeEEEEECC-CCCEEEEEEHHHHhcCC--CCCcHHHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEe
Confidence 7899999984 47999999999998753 34689999889999999999999999999999999999999
No 15
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.80 E-value=4.3e-19 Score=178.24 Aligned_cols=134 Identities=15% Similarity=0.154 Sum_probs=119.3
Q ss_pred ccCHHHHHHHHHhhccccccC---------CCCCHHHHHHHHHHhcCcccccccccccCcceEEEcCCCCHHHHHHHHHH
Q 019997 65 LFRRAELKTLVNLHGNEAGKG---------GELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLIL 135 (332)
Q Consensus 65 ~ls~eEL~~lv~~~~~e~~e~---------G~L~~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~ 135 (332)
.++.+++..+++.. .++ +.+++++++.+++++++++.+|+++|++ +++++++++|+. ++++.++
T Consensus 110 ~l~~dd~~~ll~~l----~~~~~~~~~~ll~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~v~v~~~~tv~-ea~~~~~ 182 (473)
T 2zy9_A 110 ELSLDDLADALQAV----RKEDPAYFQRLKDLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLR 182 (473)
T ss_dssp HSCHHHHHHHHHHH----HHSCHHHHHHHTTSSCHHHHHHHHHHHTSCTTBSTTTCBS--CEEEECTTCBHH-HHHHHHH
T ss_pred hCCHHHHHHHHHhC----CHhHHHHHHHHHhcCCHHHHHHHHHHhcCCCCCHHHhCCC--CceEeCCCCcHH-HHHHHHH
Confidence 36778888888742 234 7899999999999999999999999997 799999999998 9999999
Q ss_pred Hc-----CCcEEEEEecCCCcEEEEEEhhhHhccCCccccccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 136 EK-----GHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 136 ~~-----~~SriPVvd~~~~~ivGIVt~rDLl~~~~~~~~~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
++ +++++||+|+ .++++|+|+.+|++... ...+++++|.+++++|++++++.++++.|++++.+.+||+|
T Consensus 183 ~~~~~~~~~~~ipVvd~-~~~lvGiVt~~Dll~~~--~~~~v~dim~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVD 257 (473)
T 2zy9_A 183 RAAPDAETIYYIYVVDE-KGRLKGVLSLRDLIVAD--PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVD 257 (473)
T ss_dssp HHGGGCSEEEEEEEECT-TSBEEEEEEHHHHHHSC--TTSBGGGTSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEEC
T ss_pred hccCCcCceeEEEEECC-CCcEEEEEEHHHHhcCC--CCCcHHHHhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEc
Confidence 86 5799999984 47999999999998753 34689999989999999999999999999999999999999
No 16
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.79 E-value=1.7e-18 Score=162.66 Aligned_cols=117 Identities=17% Similarity=0.181 Sum_probs=107.6
Q ss_pred CCCCHHHHHHHHHHhcCcccccccccccCcceEEEcCCCCHHHHHHHHHHHc-----CCcEEEEEecCCCcEEEEEEhhh
Q 019997 86 GELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEK-----GHSRVPVYYEEPTNIIGLILVKN 160 (332)
Q Consensus 86 G~L~~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~-----~~SriPVvd~~~~~ivGIVt~rD 160 (332)
+.++.+++..+.+++.+.+.+|+++|++ +++++++++|+. ++++.|.++ +++++||+|+ .++++|+|+.+|
T Consensus 118 ~~l~~~e~~~i~~ll~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~~~~~~~~~~~pVvd~-~~~lvGivt~~d 193 (286)
T 2oux_A 118 SLLSSEEAGEIKELLHYEDETAGAIMTT--EFVSIVANQTVR-SAMYVLKNQADMAETIYYVYVVDQ-ENHLVGVISLRD 193 (286)
T ss_dssp HTSCHHHHHHHHHHTTSCTTBHHHHCBS--CCCEECSSSBHH-HHHHHHHHHCSSCSCCSEEEEECT-TCBEEEEEEHHH
T ss_pred HcCCHHHHHHHHHHhcCChHHHHHhCCC--CceEECCCCcHH-HHHHHHHHcccCccceeEEEEEcC-CCeEEEEEEHHH
Confidence 4688899999999999999999999997 788999999998 999999988 8999999984 579999999999
Q ss_pred HhccCCccccccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 161 LLTIHPEDEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 161 Ll~~~~~~~~~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
++.... ..+++++|.+++++|++++++.+|++.|.+++.+.+||+|
T Consensus 194 ll~~~~--~~~v~~im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd 239 (286)
T 2oux_A 194 LIVNDD--DTLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTD 239 (286)
T ss_dssp HTTSCT--TSBHHHHSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred HHcCCC--CCcHHHHcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEc
Confidence 987643 4679999989999999999999999999999999999999
No 17
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.78 E-value=1.4e-18 Score=144.71 Aligned_cols=104 Identities=19% Similarity=0.201 Sum_probs=92.2
Q ss_pred cccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCC----------------
Q 019997 103 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP---------------- 166 (332)
Q Consensus 103 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~---------------- 166 (332)
...+|+++|+++.+++++++++|+. ++++.|.+++++++||+++ .++++|+|+.+|++.+..
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~-~~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~ 80 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVD-EALELLVENRITGFPVIDE-DWKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLS 80 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHH-HHHHHHHHTTCSEEEEECT-TCBEEEEEEHHHHTTCC----CCHHHHHHHTC--
T ss_pred ceEEhhhccCCCCCCeEECCCCcHH-HHHHHHHHcCCceEEEEeC-CCeEEEEEEHHHHHHhhcccCcccchHHHHHHHH
Confidence 4678999999877889999999998 9999999999999999984 479999999999986421
Q ss_pred -ccccccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 167 -EDEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 167 -~~~~~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
....++.++|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 81 ~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd 123 (152)
T 4gqw_A 81 KTNGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVD 123 (152)
T ss_dssp ---CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEEC
T ss_pred HhccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEEC
Confidence 123679999988899999999999999999999999999999
No 18
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.77 E-value=1.9e-18 Score=145.76 Aligned_cols=109 Identities=18% Similarity=0.210 Sum_probs=90.7
Q ss_pred HHHHhcCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCCc--------
Q 019997 96 IAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE-------- 167 (332)
Q Consensus 96 I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~~-------- 167 (332)
.++...+...+|+++|+++.+++++++++|+. ++++.|.+++++++||+++ .|+++|+|+.+|++.....
T Consensus 2 ~~~~~~l~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~-~~~~~Givt~~dl~~~~~~~~~~~~~~ 79 (157)
T 2emq_A 2 TWEHNEFMQMTVKPFLIPADKVAHVQPGNYLD-HALLVLTKTGYSAIPVLDT-SYKLHGLISMTMMMDAILGLERIEFER 79 (157)
T ss_dssp --------CCBSTTTCEEGGGSCCBCTTSBHH-HHHHHHHHSSSSEEEEECT-TCCEEEEEEHHHHHHHSBCSSSBCGGG
T ss_pred chhHhhHhhCcHHhhccCCccceEECCCCcHH-HHHHHHHHCCceEEEEEcC-CCCEEEEeeHHHHHHHHhcccccchHH
Confidence 35566788999999999866788999999998 9999999999999999984 4799999999999875432
Q ss_pred -cccccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 168 -DEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 168 -~~~~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
...++.++|.++++++++++++.+|++.|.+++. +||+|
T Consensus 80 ~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd 119 (157)
T 2emq_A 80 LETMKVEEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVEN 119 (157)
T ss_dssp GGTCBGGGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEEC
T ss_pred hcCCcHHHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEc
Confidence 2468999998999999999999999999999976 99999
No 19
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.77 E-value=9.8e-19 Score=141.23 Aligned_cols=100 Identities=13% Similarity=0.237 Sum_probs=90.5
Q ss_pred cccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCCccccccccccccCCceeC
Q 019997 105 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIPRVP 184 (332)
Q Consensus 105 ~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~~~~~~V~dim~r~v~~V~ 184 (332)
.+|+++|++ ++.++++++++. ++++.|.+++++.+||++ +.|+++|+|+.+|++.+......++.++|.+++++++
T Consensus 1 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~~~~~~G~vt~~dl~~~~~~~~~~v~~~~~~~~~~v~ 76 (122)
T 3kpb_A 1 TLVKDILSK--PPITAHSNISIM-EAAKILIKHNINHLPIVD-EHGKLVGIITSWDIAKALAQNKKTIEEIMTRNVITAH 76 (122)
T ss_dssp CBHHHHCCS--CCCCEETTSBHH-HHHHHHHHHTCSCEEEEC-TTSBEEEEECHHHHHHHHHTTCCBGGGTSBSSCCCEE
T ss_pred CchHHhhCC--CCEEeCCCCcHH-HHHHHHHHcCCCeEEEEC-CCCCEEEEEEHHHHHHHHHhcccCHHHHhcCCCeEEC
Confidence 368999997 678899999998 999999999999999998 4579999999999998644445589999989999999
Q ss_pred CCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 185 ETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 185 e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
+++++.++++.|.+++.+.+||+|
T Consensus 77 ~~~~l~~~~~~~~~~~~~~l~Vvd 100 (122)
T 3kpb_A 77 EDEPVDHVAIKMSKYNISGVPVVD 100 (122)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred CCCCHHHHHHHHHHhCCCeEEEEC
Confidence 999999999999999999999999
No 20
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.77 E-value=1.2e-18 Score=146.15 Aligned_cols=106 Identities=19% Similarity=0.189 Sum_probs=93.4
Q ss_pred HhcCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCCc---------cc
Q 019997 99 ALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE---------DE 169 (332)
Q Consensus 99 vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~~---------~~ 169 (332)
...|...+|+++|+|..+++++++++|+. ++++.|.+++++++||+|+ .|+++|+|+.+|++.+... ..
T Consensus 9 ~~~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~~~~~~~~~~pVvd~-~~~~~Givt~~dl~~~~~~~~~~~~~~~~~ 86 (150)
T 3lqn_A 9 KDEFQQIFVKDLMISSEKVAHVQIGNGLE-HALLVLVKSGYSAIPVLDP-MYKLHGLISTAMILDGILGLERIEFERLEE 86 (150)
T ss_dssp HHHHHHCBHHHHSEEGGGSCCBCTTSBHH-HHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHHHHTBCSSSBCGGGGGG
T ss_pred HHhhhcCChhhcccCCCceEEECCCCcHH-HHHHHHHHcCCcEEEEECC-CCCEEEEEEHHHHHHHHHhhcccchhHHhc
Confidence 34567889999999866789999999998 9999999999999999984 5799999999999875421 24
Q ss_pred cccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 170 VPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 170 ~~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
.++.++|.++++++++++++.+|++.|.+++. +||+|
T Consensus 87 ~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd 123 (150)
T 3lqn_A 87 MKVEQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVN 123 (150)
T ss_dssp CBGGGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEEC
T ss_pred CCHHHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEEC
Confidence 68999998899999999999999999999876 99999
No 21
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.77 E-value=9.4e-19 Score=147.92 Aligned_cols=109 Identities=16% Similarity=0.209 Sum_probs=94.9
Q ss_pred HHHHhcCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCCc--------
Q 019997 96 IAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE-------- 167 (332)
Q Consensus 96 I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~~-------- 167 (332)
..++..+...+|+++|+|+.+++++++++|+. ++++.|.+++++++||+|+ .|+++|+|+.+|++.....
T Consensus 6 ~~~~~~l~~~~v~dim~p~~~~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~-~~~~~Giit~~dl~~~~~~~~~~~~~~ 83 (156)
T 3ctu_A 6 AKEFETFLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYTRVPVVTD-EKQFVGTIGLRDIMAYQMEHDLSQEIM 83 (156)
T ss_dssp HHHHHHHHHTTGGGGEEEGGGCCCEETTSBHH-HHHHHHTTCSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCCHHHH
T ss_pred cHHHHHHHHHHHHHHcCcccCceEECCCCCHH-HHHHHHHHCCCceEeEECC-CCEEEEEEcHHHHHHHHHhcccccccc
Confidence 34555777889999999988999999999998 9999999999999999984 4799999999999875321
Q ss_pred cccccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 168 DEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 168 ~~~~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
...+++++|.++++++++++++.+|+..|.+++ .+||+|
T Consensus 84 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd 122 (156)
T 3ctu_A 84 ADTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVD 122 (156)
T ss_dssp TTSBGGGGCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEEC
T ss_pred ccCcHHHhccCCceeeCCCCcHHHHHHHHHHcC--eEEEEc
Confidence 146799999899999999999999999999886 699999
No 22
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.77 E-value=3.2e-18 Score=140.23 Aligned_cols=101 Identities=10% Similarity=0.093 Sum_probs=91.4
Q ss_pred cccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCCccc---cccccccccC
Q 019997 103 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDE---VPVKSVTIRR 179 (332)
Q Consensus 103 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~~~~---~~V~dim~r~ 179 (332)
...+|+++|++ ++.++++++++. ++++.|.+++++.+||+++ |+++|+|+.+|+++...++. .+++++|.++
T Consensus 3 ~s~~v~~~m~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~--~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~ 77 (128)
T 3gby_A 3 ASVTFSYLAET--DYPVFTLGGSTA-DAARRLAASGCACAPVLDG--ERYLGMVHLSRLLEGRKGWPTVKEKLGEELLET 77 (128)
T ss_dssp TTCBGGGGCBC--CSCCEETTSBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHTTCSSSCCTTCBCCGGGCBC
T ss_pred cceEHHHhhcC--CcceECCCCCHH-HHHHHHHHCCCcEEEEEEC--CEEEEEEEHHHHHHHHhhCCcccCcHHHHccCC
Confidence 56899999997 577899999998 9999999999999999984 79999999999998654322 5699999999
Q ss_pred CceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 180 IPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 180 v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
++++++++++.+|++.|.+++.+.+||+|
T Consensus 78 ~~~v~~~~~l~~~~~~~~~~~~~~lpVvd 106 (128)
T 3gby_A 78 VRSYRPGEQLFDNLISVAAAKCSVVPLAD 106 (128)
T ss_dssp CCCBCTTSBGGGSHHHHHHCSSSEEEEEC
T ss_pred CcEECCCCCHHHHHHHHHhCCCcEEEEEC
Confidence 99999999999999999999999999999
No 23
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.76 E-value=6.2e-18 Score=138.73 Aligned_cols=102 Identities=17% Similarity=0.238 Sum_probs=91.2
Q ss_pred CcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCC---cccccccccccc
Q 019997 102 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP---EDEVPVKSVTIR 178 (332)
Q Consensus 102 l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~---~~~~~V~dim~r 178 (332)
|.+.+|+++|++ ++.++++++|+. ++++.|.+++++++||++ .|+++|+|+.+|++.... ....++.++|.+
T Consensus 1 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd--~~~~~Givt~~dl~~~~~~~~~~~~~v~~~~~~ 75 (133)
T 2ef7_A 1 MEEEIVKEYMKT--QVISVTKDAKLN-DIAKVMTEKNIGSVIVVD--GNKPVGIITERDIVKAIGKGKSLETKAEEFMTA 75 (133)
T ss_dssp CCCCBGGGTSBC--SCCEEETTCBHH-HHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHHTTCCTTCBGGGTSEE
T ss_pred CCcccHHHhccC--CCEEECCCCcHH-HHHHHHHhcCCCEEEEEE--CCEEEEEEcHHHHHHHHhcCCCcccCHHHHcCC
Confidence 467899999997 678899999998 999999999999999998 469999999999986422 124689999888
Q ss_pred CCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 179 RIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 179 ~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
++.++++++++.++++.|.+++.+.+||+|
T Consensus 76 ~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd 105 (133)
T 2ef7_A 76 SLITIREDSPITGALALMRQFNIRHLPVVD 105 (133)
T ss_dssp CCCCEETTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred CCEEECCCCCHHHHHHHHHHcCCCEEEEEC
Confidence 999999999999999999999999999999
No 24
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.76 E-value=3.2e-18 Score=147.00 Aligned_cols=103 Identities=18% Similarity=0.214 Sum_probs=91.5
Q ss_pred ccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccC------------------
Q 019997 104 EKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH------------------ 165 (332)
Q Consensus 104 ~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~------------------ 165 (332)
.++|+++|+++.+++++++++|+. ++++.|.+++++++||+++ .++++|+|+.+|++++.
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~-~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~ 80 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVD-DALELLVEKKVTGLPVIDD-NWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDS 80 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHH-HHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHTCC-------------------
T ss_pred ceeHHHhcCCCCCceeeCCCCcHH-HHHHHHHHcCCCeEEEECC-CCeEEEEEEHHHHHhhhhhccccCCcccccccccc
Confidence 468999999877889999999998 9999999999999999984 57999999999998531
Q ss_pred -------------CccccccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 166 -------------PEDEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 166 -------------~~~~~~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
.....+++++|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 136 (180)
T 3sl7_A 81 TWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVD 136 (180)
T ss_dssp CCCSHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEEC
T ss_pred hhhhhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEEC
Confidence 1124579999988899999999999999999999999999999
No 25
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.75 E-value=1.5e-17 Score=137.24 Aligned_cols=104 Identities=14% Similarity=0.260 Sum_probs=91.7
Q ss_pred hcCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHh-ccCCc---cccccccc
Q 019997 100 LELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLL-TIHPE---DEVPVKSV 175 (332)
Q Consensus 100 l~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl-~~~~~---~~~~V~di 175 (332)
+.|...+|+++|++ ++.++++++|+. ++++.|.+++++.+||+++ .|+++|+|+.+|++ .+... ...++.++
T Consensus 2 ~~l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~ 77 (138)
T 2yzi_A 2 VMDMKAPIKVYMTK--KLLGVKPSTSVQ-EASRLMMEFDVGSLVVIND-DGNVVGFFTKSDIIRRVIVPGLPYDIPVERI 77 (138)
T ss_dssp -CCTTSBGGGTCBC--CCCEECTTSBHH-HHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHTTTTCCCTTSBGGGT
T ss_pred cchhhhhHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcC-CCcEEEEEeHHHHHHHHHhcCCcccCCHHHH
Confidence 46788999999985 778899999998 9999999999999999984 57999999999997 33321 24689999
Q ss_pred cccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 176 TIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 176 m~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
|.++++++++++++.+|++.|.+++.+.+ |+|
T Consensus 78 m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd 109 (138)
T 2yzi_A 78 MTRNLITANVNTPLGEVLRKMAEHRIKHI-LIE 109 (138)
T ss_dssp CBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEE
T ss_pred hhCCCeEECCCCcHHHHHHHHHhcCCCEE-EEC
Confidence 88999999999999999999999999999 999
No 26
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.75 E-value=3.8e-18 Score=160.99 Aligned_cols=125 Identities=9% Similarity=0.152 Sum_probs=105.5
Q ss_pred CCCHHHHHHHHHHhcC-cccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccC
Q 019997 87 ELTHDETTIIAGALEL-TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 165 (332)
Q Consensus 87 ~L~~eE~~~I~~vl~l-~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~ 165 (332)
-++++|+++++++++| .+.+|+++|+|+.+++++++++|+. ++++.|.+++++++||++++.++++|+|+.+|++...
T Consensus 3 ~~~~~~~~~~~~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~-~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~ 81 (334)
T 2qrd_G 3 DVQETQKGALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVK-TSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVI 81 (334)
T ss_dssp SHHHHHHHHHHHHHHHHHHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHhcCchhhhCCCCCCEEEEcCCCCHH-HHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHH
Confidence 4567889999999985 4599999999999999999999998 9999999999999999996657999999999998632
Q ss_pred --------Ccc------ccccc-------cccccCC--ceeCCCCCHHHHHHHHHhCCCcEEEEEEcCCC
Q 019997 166 --------PED------EVPVK-------SVTIRRI--PRVPETLPLYEILNEFQKGHSHMAVVVRQYNK 212 (332)
Q Consensus 166 --------~~~------~~~V~-------dim~r~v--~~V~e~~~l~eaL~~M~~~~~~~a~VVDEyG~ 212 (332)
... ..++. ++|.+++ +++++++++.++++.|.+++.+.+||+|++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~ 151 (334)
T 2qrd_G 82 KYYYQSSSFPEAIAEIDKFRLLGLREVERKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGE 151 (334)
T ss_dssp HHHHHHCSCGGGGGGGGSCBHHHHHHHHHHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETT
T ss_pred HHHhhccCCccHHHHHhhhchhhHHHHHHhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCC
Confidence 111 22222 3467777 89999999999999999999999999996543
No 27
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.75 E-value=3.3e-18 Score=143.93 Aligned_cols=102 Identities=20% Similarity=0.205 Sum_probs=92.2
Q ss_pred cccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCCc----cccccccccccCC
Q 019997 105 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE----DEVPVKSVTIRRI 180 (332)
Q Consensus 105 ~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~~----~~~~V~dim~r~v 180 (332)
.+|+++|+++.+++++++++|+. ++++.|.+++++.+||+++ .|+++|+|+.+|+++.... ...++.++|.+++
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~ 105 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLR-DALLEITRKNLGMTAICDD-DMNIIGIFTDGDLRRVFDTGVDMRDASIADVMTRGG 105 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHH-HHHHHHHHHTSSEEEEECT-TCBEEEEEEHHHHHHHHCSSSCCTTCBHHHHSEESC
T ss_pred cCHHHHhcCCCCCeEECCCCcHH-HHHHHHHhCCCcEEEEECC-CCcEEEEecHHHHHHHHhcCCCcccCcHHHHcCCCC
Confidence 58999999866788999999998 9999999999999999984 4799999999999875322 2468999998999
Q ss_pred ceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 181 PRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 181 ~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
+++++++++.+|++.|.+++.+.+||+|
T Consensus 106 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd 133 (149)
T 3k2v_A 106 IRIRPGTLAVDALNLMQSRHITCVLVAD 133 (149)
T ss_dssp CEECTTCBHHHHHHHHHHHTCSEEEEEE
T ss_pred eEECCCCCHHHHHHHHHHcCCCEEEEec
Confidence 9999999999999999999999999999
No 28
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.75 E-value=9e-18 Score=138.31 Aligned_cols=100 Identities=11% Similarity=0.105 Sum_probs=89.6
Q ss_pred ccccccccC-cceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhc-cCC----ccccccccccccC
Q 019997 106 TASDAMTPI-AETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLT-IHP----EDEVPVKSVTIRR 179 (332)
Q Consensus 106 tV~dIMtPr-~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~-~~~----~~~~~V~dim~r~ 179 (332)
+|+++|+|+ .++.++++++|+. ++++.|.+++++++||++ +|+++|+|+.+|+++ ... ....++.++|.++
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd--~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~ 83 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVF-NAMQKMAADNIGALLVMK--DEKLVGILTERDFSRKSYLLDKPVKDTQVKEIMTRQ 83 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHH-HHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHGGGSSSCGGGSBGGGTSBCS
T ss_pred eHHHHHhcCCCCcEEECCCCcHH-HHHHHHHhcCCCEEEEEE--CCEEEEEEehHHHHHHHHHcCCCcccCCHHHhccCC
Confidence 899999965 5788999999998 999999999999999997 469999999999985 321 1356899999899
Q ss_pred CceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 180 IPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 180 v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
++++++++++.+|++.|.+++.+.+||+|
T Consensus 84 ~~~v~~~~~l~~~~~~m~~~~~~~lpVvd 112 (135)
T 2rc3_A 84 VAYVDLNNTNEDCMALITEMRVRHLPVLD 112 (135)
T ss_dssp CCCBCTTCBHHHHHHHHHHHTCSEEEEEE
T ss_pred CeEECCCCcHHHHHHHHHHhCCCEEEEEe
Confidence 99999999999999999999999999999
No 29
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.74 E-value=6.5e-18 Score=144.63 Aligned_cols=110 Identities=9% Similarity=0.093 Sum_probs=96.5
Q ss_pred HHHhcCcccccccccccC-cceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCC-----cccc
Q 019997 97 AGALELTEKTASDAMTPI-AETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP-----EDEV 170 (332)
Q Consensus 97 ~~vl~l~~~tV~dIMtPr-~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~-----~~~~ 170 (332)
.....+..++|+++|+|+ .+++++++++|+. ++++.|.+++++.+||+| +.|+++|+|+.+|++++.. ....
T Consensus 16 ~~~~~l~~~~v~dim~~~~~~~~~v~~~~~l~-~a~~~~~~~~~~~~~Vvd-~~~~~~Givt~~dl~~~~~~~~~~~~~~ 93 (165)
T 3fhm_A 16 NLYFQGMATFVKDLLDRKGRDVVTVGPDVSIG-EAAGTLHAHKIGAVVVTD-ADGVVLGIFTERDLVKAVAGQGAASLQQ 93 (165)
T ss_dssp CCCCSSSSCBHHHHHHHHCSCCCEECTTSBHH-HHHHHHHHHTCSEEEEEC-TTSCEEEEEEHHHHHHHHHHHGGGGGTS
T ss_pred hhhHhhhhcCHHHHhccCCCCCeEECCCCCHH-HHHHHHHHcCCCEEEEEc-CCCeEEEEEEHHHHHHHHHhcCCccccC
Confidence 344577889999999974 4678999999998 999999999999999998 4479999999999987422 1246
Q ss_pred ccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 171 PVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 171 ~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
++.++|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 94 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 131 (165)
T 3fhm_A 94 SVSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEE 131 (165)
T ss_dssp BGGGTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE
T ss_pred CHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEE
Confidence 89999999999999999999999999999999999999
No 30
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.73 E-value=2.5e-17 Score=135.66 Aligned_cols=103 Identities=17% Similarity=0.270 Sum_probs=90.6
Q ss_pred CcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhH-hccCCc---cccccccccc
Q 019997 102 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNL-LTIHPE---DEVPVKSVTI 177 (332)
Q Consensus 102 l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDL-l~~~~~---~~~~V~dim~ 177 (332)
|.+.+|+++|++ ++.++++++|+. ++++.|.+++++++||+++ .++++|+|+.+|+ +..... ...++.++|.
T Consensus 5 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~ 80 (138)
T 2p9m_A 5 LKNIKVKDVMTK--NVITAKRHEGVV-EAFEKMLKYKISSLPVIDD-ENKVIGIVTTTDIGYNLIRDKYTLETTIGDVMT 80 (138)
T ss_dssp CTTCBGGGTSBC--SCCCEETTSBHH-HHHHHHHHHTCCEEEEECT-TCBEEEEEEHHHHHHHHTTTCCCSSCBHHHHSC
T ss_pred cccCCHHHhhcC--CceEECCCCcHH-HHHHHHHHCCCcEEEEECC-CCeEEEEEEHHHHHHHHHhhcccCCcCHHHHhC
Confidence 568899999986 678899999998 9999999999999999984 4799999999999 764322 2467999988
Q ss_pred cCCceeCCCCCHHHHHHHHHhCC-----CcEEEEEE
Q 019997 178 RRIPRVPETLPLYEILNEFQKGH-----SHMAVVVR 208 (332)
Q Consensus 178 r~v~~V~e~~~l~eaL~~M~~~~-----~~~a~VVD 208 (332)
+++.++++++++.++++.|.+++ .+.+||+|
T Consensus 81 ~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd 116 (138)
T 2p9m_A 81 KDVITIHEDASILEAIKKMDISGKKEEIINQLPVVD 116 (138)
T ss_dssp SSCCCEETTSBHHHHHHHHTCC-----CCCEEEEEC
T ss_pred CCcEEECCCCCHHHHHHHHHhcCCccccccEEEEEC
Confidence 89999999999999999999999 99999999
No 31
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.73 E-value=1.9e-17 Score=137.60 Aligned_cols=99 Identities=10% Similarity=0.154 Sum_probs=88.8
Q ss_pred cccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCC--cEEEEEEhhhHhccCC---ccccccccccccC
Q 019997 105 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPT--NIIGLILVKNLLTIHP---EDEVPVKSVTIRR 179 (332)
Q Consensus 105 ~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~--~ivGIVt~rDLl~~~~---~~~~~V~dim~r~ 179 (332)
.+|+++|++ ++.++++++|+. ++++.|.+++++++||+++ .+ +++|+|+.+|++.... ....++.++|.++
T Consensus 5 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~-~~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~ 80 (141)
T 2rih_A 5 IRTSELLKR--PPVSLPETATIR-EVATELAKNRVGLAVLTAR-DNPKRPVAVVSERDILRAVAQRLDLDGPAMPIANSP 80 (141)
T ss_dssp CBGGGGCCS--CCEEEETTCBHH-HHHHHHHHHTCSEEEEEET-TEEEEEEEEEEHHHHHHHHHTTCCTTSBSGGGCBCC
T ss_pred eEHHHHhcC--CCeEeCCCCcHH-HHHHHHHHcCCCEEEEEcC-CCcceeEEEEEHHHHHHHHhcCCCCCCCHHHHcCCC
Confidence 689999986 788999999998 9999999999999999984 45 8999999999987521 1246899999899
Q ss_pred CceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 180 IPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 180 v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
+++++++ ++.+|++.|.+++.+.+||+|
T Consensus 81 ~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd 108 (141)
T 2rih_A 81 ITVLDTD-PVHVAAEKMRRHNIRHVVVVN 108 (141)
T ss_dssp CEEETTS-BHHHHHHHHHHHTCSEEEEEC
T ss_pred CeEEcCC-CHHHHHHHHHHcCCeEEEEEc
Confidence 9999999 999999999999999999999
No 32
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.72 E-value=2.7e-17 Score=142.02 Aligned_cols=105 Identities=17% Similarity=0.280 Sum_probs=91.4
Q ss_pred cccccccccccCcc--eEEE--cCCCCHHHHHHHHHHHcCCcEEEEEe-cCCCcEEEEEEhhhHhccCC-----------
Q 019997 103 TEKTASDAMTPIAE--TFAI--DINAKLDKELMNLILEKGHSRVPVYY-EEPTNIIGLILVKNLLTIHP----------- 166 (332)
Q Consensus 103 ~~~tV~dIMtPr~~--VvtV--~~d~tv~~eal~~m~~~~~SriPVvd-~~~~~ivGIVt~rDLl~~~~----------- 166 (332)
...+|+++|++..+ ++++ ++++|+. ++++.|.+++++++||++ ++.|+++|+|+.+|++....
T Consensus 9 ~~~~v~dim~~~~~~~~~~v~~~~~~~~~-~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~~~ 87 (185)
T 2j9l_A 9 HKTLAMDVMKPRRNDPLLTVLTQDSMTVE-DVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVS 87 (185)
T ss_dssp CCCBHHHHSBSCTTSCCCCCEESSCEEHH-HHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCCCT
T ss_pred ccCcHHHHhcccccCceEEEecCCCccHH-HHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCccc
Confidence 67899999998533 6777 9999998 999999999999999993 25579999999999986421
Q ss_pred -----------------ccccccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 167 -----------------EDEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 167 -----------------~~~~~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
....++.++|.+++++|++++++.+|+..|.+++.+.+||+|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd 146 (185)
T 2j9l_A 88 TSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH 146 (185)
T ss_dssp TCEEECSSSCCCCCTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE
T ss_pred cceeecccCCcccccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE
Confidence 224679999889999999999999999999999999999999
No 33
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.72 E-value=4.1e-17 Score=138.77 Aligned_cols=103 Identities=16% Similarity=0.187 Sum_probs=90.6
Q ss_pred CcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccC----Cccccccccccc
Q 019997 102 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH----PEDEVPVKSVTI 177 (332)
Q Consensus 102 l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~----~~~~~~V~dim~ 177 (332)
+..++|+++|++ . +++++++|+. ++++.|.+++++++||+++ .|+++|+|+.+|++... .....++.++|.
T Consensus 14 l~~~~v~~im~~--~-~~v~~~~~~~-~a~~~m~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~ 88 (159)
T 3fv6_A 14 LKKLQVKDFQSI--P-VVIHENVSVY-DAICTMFLEDVGTLFVVDR-DAVLVGVLSRKDLLRASIGQQELTSVPVHIIMT 88 (159)
T ss_dssp HTTCBGGGSCBC--C-CEEETTSBHH-HHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHHTSCSCTTTCBGGGTSE
T ss_pred HhhCCHHHHcCC--C-EEECCCCcHH-HHHHHHHHCCCCEEEEEcC-CCcEEEEEeHHHHHHHhhccCcccCcCHHHHHc
Confidence 467899999985 3 4899999998 9999999999999999984 47999999999998743 113468999988
Q ss_pred c--CCceeCCCCCHHHHHHHHHhCCCcEEEEEEc
Q 019997 178 R--RIPRVPETLPLYEILNEFQKGHSHMAVVVRQ 209 (332)
Q Consensus 178 r--~v~~V~e~~~l~eaL~~M~~~~~~~a~VVDE 209 (332)
+ +++++++++++.+|++.|.+++.+.+||+|+
T Consensus 89 ~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 122 (159)
T 3fv6_A 89 RMPNITVCRREDYVMDIAKHLIEKQIDALPVIKD 122 (159)
T ss_dssp ETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEE
T ss_pred CCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeC
Confidence 7 8899999999999999999999999999993
No 34
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.72 E-value=1.7e-17 Score=140.83 Aligned_cols=105 Identities=18% Similarity=0.256 Sum_probs=91.3
Q ss_pred hcCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCCc---------ccc
Q 019997 100 LELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE---------DEV 170 (332)
Q Consensus 100 l~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~~---------~~~ 170 (332)
..+...+|+++|+++.+++++++++|+. ++++.|.+++++++||+|+ .++++|+|+.+|++..... ...
T Consensus 9 ~~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~-~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~ 86 (159)
T 1yav_A 9 DQLLEATVGQFMIEADKVAHVQVGNNLE-HALLVLTKTGYTAIPVLDP-SYRLHGLIGTNMIMNSIFGLERIEFEKLDQI 86 (159)
T ss_dssp --CTTCBHHHHSEEGGGSCCEETTCBHH-HHHHHHHHHCCSEEEEECT-TCBEEEEEEHHHHHHHHBCSSSBCGGGTTTS
T ss_pred HHHhHhhHHHHhCCccceEEECCCCcHH-HHHHHHHhCCCcEEEEECC-CCCEEEEeEHHHHHHHhhhhcccchhhhccC
Confidence 3677899999999866788999999998 9999999999999999984 4699999999999874321 246
Q ss_pred ccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 171 PVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 171 ~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
++.++|.++++++++++++.+|++.|.+++. +||+|
T Consensus 87 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd 122 (159)
T 1yav_A 87 TVEEVMLTDIPRLHINDPIMKGFGMVINNGF--VCVEN 122 (159)
T ss_dssp BHHHHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEEC
T ss_pred CHHHhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEe
Confidence 8999988899999999999999999998865 99999
No 35
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.72 E-value=2.5e-17 Score=133.24 Aligned_cols=99 Identities=20% Similarity=0.236 Sum_probs=88.2
Q ss_pred cccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCCc----cccccccccccCC
Q 019997 105 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE----DEVPVKSVTIRRI 180 (332)
Q Consensus 105 ~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~~----~~~~V~dim~r~v 180 (332)
++|+++|++ ++.++++++|+. ++++.|.+++++++||+| +|+++|+|+.+|+++.... ...++.++|.+++
T Consensus 1 m~v~~~m~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd--~~~~~G~it~~dl~~~~~~~~~~~~~~v~~~m~~~~ 75 (125)
T 1pbj_A 1 MRVEDVMVT--DVDTIDITASLE-DVLRNYVENAKGSSVVVK--EGVRVGIVTTWDVLEAIAEGDDLAEVKVWEVMERDL 75 (125)
T ss_dssp -CHHHHCBC--SCCEEETTCBHH-HHHHHHHHHCCCEEEEEE--TTEEEEEEEHHHHHHHHHHTCCTTTSBHHHHCBCGG
T ss_pred CCHHHhcCC--CceEECCCCcHH-HHHHHHHHcCCCEEEEEe--CCeeEEEEeHHHHHHHHhcCCcccccCHHHHcCCCC
Confidence 478999986 678899999998 999999999999999998 4799999999999864311 2467999988899
Q ss_pred ceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 181 PRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 181 ~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
.++++++++.++++.|.+++.+.+||+|
T Consensus 76 ~~v~~~~~l~~~~~~~~~~~~~~l~Vvd 103 (125)
T 1pbj_A 76 VTISPRATIKEAAEKMVKNVVWRLLVEE 103 (125)
T ss_dssp GEECTTSCHHHHHHHHHHHTCSEEEEEE
T ss_pred eEECCCCCHHHHHHHHHhcCCcEEEEEE
Confidence 9999999999999999999999999999
No 36
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.72 E-value=2.4e-17 Score=139.44 Aligned_cols=109 Identities=11% Similarity=0.146 Sum_probs=91.1
Q ss_pred HHHhcCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEec-CCCcEEEEEEhhhHhccCCc--------
Q 019997 97 AGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYE-EPTNIIGLILVKNLLTIHPE-------- 167 (332)
Q Consensus 97 ~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~-~~~~ivGIVt~rDLl~~~~~-------- 167 (332)
.+.+.+...+|+++|++ +++++++++|+. ++++.|.+++++++||+|+ +.|+++|+|+.+|++.....
T Consensus 5 ~~~~~~~~~~v~dim~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~~ 81 (164)
T 2pfi_A 5 GRNIGSHHVRVEHFMNH--SITTLAKDTPLE-EVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPG 81 (164)
T ss_dssp -----CCSCBHHHHCBC--CCCCEETTCBHH-HHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------C
T ss_pred cccccccCCCHHHHcCC--CCeEECCCCcHH-HHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCCc
Confidence 45567888999999997 678899999998 9999999999999999985 25799999999999864311
Q ss_pred cccccccccccC------CceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 168 DEVPVKSVTIRR------IPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 168 ~~~~V~dim~r~------v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
...++.++|..+ +.++++++++.+|++.|.+++.+.+||+|
T Consensus 82 ~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd 128 (164)
T 2pfi_A 82 HQQCLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS 128 (164)
T ss_dssp CCCBHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE
T ss_pred ccchhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE
Confidence 124688887666 78999999999999999999999999999
No 37
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.72 E-value=4e-17 Score=138.41 Aligned_cols=102 Identities=20% Similarity=0.253 Sum_probs=90.8
Q ss_pred cCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcE-EEEEecCCCcEEEEEEhhhHhccC--------------
Q 019997 101 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSR-VPVYYEEPTNIIGLILVKNLLTIH-------------- 165 (332)
Q Consensus 101 ~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~Sr-iPVvd~~~~~ivGIVt~rDLl~~~-------------- 165 (332)
.+...+|+++|++ ++.++++++|+. ++++.|.++++++ +||+|+ . +++|+|+.+|++.+.
T Consensus 12 ~~~~~~v~~im~~--~~~~v~~~~tl~-ea~~~m~~~~~~~~~~Vvd~-~-~~vGivt~~dl~~~~~~~~~~~~~~~~~~ 86 (157)
T 1o50_A 12 HMKVKDVCKLISL--KPTVVEEDTPIE-EIVDRILEDPVTRTVYVARD-N-KLVGMIPVMHLLKVSGFHFFGFIPKEELI 86 (157)
T ss_dssp TCBHHHHTTSSCC--CCEEECTTCBHH-HHHHHHHHSTTCCEEEEEET-T-EEEEEEEHHHHHHHHHHHHHCCCC-----
T ss_pred hhccccHhhcccC--CCceECCCCCHH-HHHHHHHhCCCCccEEEEEC-C-EEEEEEEHHHHHHHHhhhHHhhhccHHHH
Confidence 4678899999986 788999999998 9999999999999 999984 3 899999999998641
Q ss_pred -----CccccccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 166 -----PEDEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 166 -----~~~~~~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
.....++.++|.+ ++++++++++.+|++.|.+++.+.+||+|
T Consensus 87 ~~~~~~~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 133 (157)
T 1o50_A 87 RSSMKRLIAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVD 133 (157)
T ss_dssp --CCCCCSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEc
Confidence 1234679999877 99999999999999999999999999999
No 38
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.71 E-value=8e-18 Score=158.76 Aligned_cols=123 Identities=9% Similarity=0.257 Sum_probs=99.6
Q ss_pred ccCCCCCHHHHHHHHHHhcCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHh
Q 019997 83 GKGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLL 162 (332)
Q Consensus 83 ~e~G~L~~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl 162 (332)
+++|.+.+.+++.+++.| .+.+|+++|+|+.+++++++++|+. ++++.|.+++++++||++++.++++|+|+.+|++
T Consensus 15 ~~~~~~~~~~~~~~~~~l--~~~~v~dim~p~~~v~~v~~~~~v~-~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll 91 (330)
T 2v8q_E 15 EHSQETPESNSSVYTTFM--KSHRCYDLIPTSSKLVVFDTSLQVK-KAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFI 91 (330)
T ss_dssp --------CCSCHHHHHH--HHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHH
T ss_pred hHhhhccchhhHHHHHHH--HcCcHhhhccCCCcEEEEeCCCcHH-HHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHH
Confidence 345777777888888885 6889999999999999999999998 9999999999999999996657899999999997
Q ss_pred ccCCc------------ccc-------ccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 163 TIHPE------------DEV-------PVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 163 ~~~~~------------~~~-------~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
..... ... .++++|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 92 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd 156 (330)
T 2v8q_E 92 NILHRYYKSALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVID 156 (330)
T ss_dssp HHHHHHHHHHTTTCCCGGGCBHHHHHHHHSSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEEC
T ss_pred HHHHHHHhccccchhHHhhccHHHHHHHHhhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEe
Confidence 63210 011 23467889999999999999999999999999999999
No 39
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.71 E-value=4.9e-17 Score=137.43 Aligned_cols=101 Identities=13% Similarity=0.164 Sum_probs=90.3
Q ss_pred cccccccccC----cceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCCc-----cccccccc
Q 019997 105 KTASDAMTPI----AETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE-----DEVPVKSV 175 (332)
Q Consensus 105 ~tV~dIMtPr----~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~~-----~~~~V~di 175 (332)
.+|+++|+++ .++.++++++|+. ++++.|.+++++++||.+ .|+++|+|+.+|++++... ...+++++
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~V~~--~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~ 83 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVY-DAIKLMAEKGIGALLVVD--GDDIAGIVTERDYARKVVLQERSSKATRVEEI 83 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHH-HHHHHHHHHTCSEEEEES--SSSEEEEEEHHHHHHHSGGGTCCSSSCBHHHH
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHH-HHHHHHHHcCCCEEEEee--CCEEEEEEEHHHHHHHHHhccCCccccCHHHH
Confidence 5799999976 6788999999998 999999999999999954 5799999999999875321 24689999
Q ss_pred cccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 176 TIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 176 m~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 84 m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd 116 (157)
T 4fry_A 84 MTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD 116 (157)
T ss_dssp SBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE
T ss_pred cCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE
Confidence 989999999999999999999999999999999
No 40
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.71 E-value=1.2e-17 Score=156.84 Aligned_cols=128 Identities=13% Similarity=0.242 Sum_probs=107.2
Q ss_pred cCCCCCHHHHHHHHHHhcC-cccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHh
Q 019997 84 KGGELTHDETTIIAGALEL-TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLL 162 (332)
Q Consensus 84 e~G~L~~eE~~~I~~vl~l-~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl 162 (332)
+.|.++.+|+++++++++| .+.+|+|+|+|+.++++++.+.|+. ++++.|.+++++++||++++.++++|+++.+|++
T Consensus 8 ~~~~~~~~~~~~~~~i~~~l~~~~~~d~m~~~~~~v~v~~~~sv~-~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl~ 86 (323)
T 3t4n_C 8 SQEKVSIEQQLAVESIRKFLNSKTSYDVLPVSYRLIVLDTSLLVK-KSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFI 86 (323)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSBHHHHSCSEEEEEEEETTSBHH-HHHHHHHHTTCSCEEEEETTTTEEEEEECHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHHhCchHhhCCCCCcEEEEcCCCcHH-HHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHHH
Confidence 4467889999999999998 9999999999999999999999998 9999999999999999997667999999999998
Q ss_pred ccCC------c--------cccccc------cccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEEcCCC
Q 019997 163 TIHP------E--------DEVPVK------SVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNK 212 (332)
Q Consensus 163 ~~~~------~--------~~~~V~------dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVDEyG~ 212 (332)
.... . ....+. ++|.++++++++++++.+|++.|.+++.+.+||+|++|.
T Consensus 87 ~~l~~~~~~~~~~~~l~~~~~~~v~~i~~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~ 156 (323)
T 3t4n_C 87 NVIQYYFSNPDKFELVDKLQLDGLKDIERALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEE 156 (323)
T ss_dssp HHHHHHHHCGGGGGGGGGCBHHHHHHHHHHTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTT
T ss_pred HHHHHHHcCcchhHHHHHHHHHHHHHHHHHhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCC
Confidence 6320 0 011223 344688999999999999999999999999999996554
No 41
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.71 E-value=5.3e-17 Score=138.42 Aligned_cols=102 Identities=20% Similarity=0.196 Sum_probs=90.4
Q ss_pred cccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCC------------cccc
Q 019997 103 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP------------EDEV 170 (332)
Q Consensus 103 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~------------~~~~ 170 (332)
...+|+++|++ +++++++++|+. ++++.|.+++++++||+|+ .|+++|+|+.+||+.... ....
T Consensus 3 ~~~~v~dim~~--~~~~v~~~~tl~-~a~~~m~~~~~~~~pVvd~-~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~ 78 (160)
T 2o16_A 3 LMIKVEDMMTR--HPHTLLRTHTLN-DAKHLMEALDIRHVPIVDA-NKKLLGIVSQRDLLAAQESSLQRSAQGDSLAFET 78 (160)
T ss_dssp CCCBGGGTSEE--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHHHHHHHHCC---------CCC
T ss_pred CcCcHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcC-CCcEEEEEeHHHHHHHHHHhhcccccccchhccc
Confidence 45789999986 678899999998 9999999999999999984 479999999999986421 1246
Q ss_pred ccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 171 PVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 171 ~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
++.++|.++++++++++++.+|+..|.+++.+.+||+|
T Consensus 79 ~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 116 (160)
T 2o16_A 79 PLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVA 116 (160)
T ss_dssp BHHHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEE
T ss_pred CHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEE
Confidence 79999988999999999999999999999999999999
No 42
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.71 E-value=2.4e-17 Score=135.21 Aligned_cols=102 Identities=15% Similarity=0.209 Sum_probs=89.0
Q ss_pred cccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHh-ccCCc----cccccccccc
Q 019997 103 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLL-TIHPE----DEVPVKSVTI 177 (332)
Q Consensus 103 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl-~~~~~----~~~~V~dim~ 177 (332)
.-.+|+++|++ ++.++++++|+. ++++.|.+++++++||+|+ .++++|+|+.+|++ ++... ...+++++|.
T Consensus 6 ~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~ 81 (133)
T 1y5h_A 6 TMTTARDIMNA--GVTCVGEHETLT-AAAQYMREHDIGALPICGD-DDRLHGMLTDRDIVIKGLAAGLDPNTATAGELAR 81 (133)
T ss_dssp --CCHHHHSEE--TCCCEETTSBHH-HHHHHHHHHTCSEEEEECG-GGBEEEEEEHHHHHHTTGGGTCCTTTSBHHHHHT
T ss_pred hhcCHHHHhcC--CceEeCCCCCHH-HHHHHHHHhCCCeEEEECC-CCeEEEEEeHHHHHHHHHhcCCCccccCHHHHhc
Confidence 44689999986 678899999998 9999999999999999974 47999999999998 33221 2467999988
Q ss_pred cCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 178 RRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 178 r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
++++++++++++.++++.|.+++.+.+||+|
T Consensus 82 ~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd 112 (133)
T 1y5h_A 82 DSIYYVDANASIQEMLNVMEEHQVRRVPVIS 112 (133)
T ss_dssp TCCCCEETTCCHHHHHHHHHHHTCSEEEEEE
T ss_pred CCCEEECCCCCHHHHHHHHHHcCCCEEEEEE
Confidence 9999999999999999999999999999999
No 43
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.70 E-value=4.6e-17 Score=134.54 Aligned_cols=103 Identities=15% Similarity=0.203 Sum_probs=87.5
Q ss_pred Cccccccc---ccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCCc-----cccccc
Q 019997 102 LTEKTASD---AMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE-----DEVPVK 173 (332)
Q Consensus 102 l~~~tV~d---IMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~~-----~~~~V~ 173 (332)
+-+.++++ +|++ +++++++++|+. ++++.|.+++++++||+++ .++++|+|+.+|++..... ...++.
T Consensus 5 ~~~~~v~~~~~~~~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~ 80 (144)
T 2nyc_A 5 FLKIPIGDLNIITQD--NMKSCQMTTPVI-DVIQMLTQGRVSSVPIIDE-NGYLINVYEAYDVLGLIKGGIYNDLSLSVG 80 (144)
T ss_dssp GGGSBGGGSSCCBCS--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHHHHHHTC----CCSBHH
T ss_pred hhhcchhhcCCCCCC--CceEECCCCcHH-HHHHHHHHcCcceeeEEcC-CCcEEEEEcHHHHHHHhcccccccCCccHH
Confidence 45667888 7874 788899999998 9999999999999999984 4799999999999874321 245789
Q ss_pred ccccc------CCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 174 SVTIR------RIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 174 dim~r------~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
++|.+ +++++++++++.+|++.|.+++.+.+||+|
T Consensus 81 ~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd 121 (144)
T 2nyc_A 81 EALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVD 121 (144)
T ss_dssp HHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEEC
Confidence 98866 688999999999999999999999999999
No 44
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.70 E-value=7e-17 Score=140.72 Aligned_cols=100 Identities=17% Similarity=0.248 Sum_probs=90.2
Q ss_pred cccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCC-----ccccccccccccC
Q 019997 105 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP-----EDEVPVKSVTIRR 179 (332)
Q Consensus 105 ~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~-----~~~~~V~dim~r~ 179 (332)
.+|+++|++ +++++++++|+. ++++.|.+++++++||+++ .|+++|+|+.+|++.... ....+++++|.++
T Consensus 9 ~~v~~im~~--~~~~v~~~~~l~-ea~~~~~~~~~~~~pVvd~-~g~~vGivt~~dl~~~~~~~~~~~~~~~v~~im~~~ 84 (184)
T 1pvm_A 9 MRVEKIMNS--NFKTVNWNTTVF-DAVKIMNENHLYGLVVKDD-NGNDVGLLSERSIIKRFIPRNKKPDEVPIRLVMRKP 84 (184)
T ss_dssp CBGGGTSBT--TCCEEETTCBHH-HHHHHHHHHTCCEEEEECT-TSCEEEEEEHHHHHHHTGGGCCCGGGSBGGGTSBSS
T ss_pred cCHHHhcCC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcC-CCcEEEEEeHHHHHHHHhhcccCcccCCHHHHhCCC
Confidence 789999985 788999999998 9999999999999999984 479999999999987532 2346899998889
Q ss_pred CceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 180 IPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 180 v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
++++++++++.+|++.|.+++.+.+||+|
T Consensus 85 ~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 113 (184)
T 1pvm_A 85 IPKVKSDYDVKDVAAYLSENGLERCAVVD 113 (184)
T ss_dssp CCEEETTCBHHHHHHHHHHHTCSEEEEEC
T ss_pred CcEECCCCCHHHHHHHHHHcCCcEEEEEc
Confidence 99999999999999999999999999999
No 45
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.68 E-value=1.6e-16 Score=133.90 Aligned_cols=102 Identities=17% Similarity=0.199 Sum_probs=87.8
Q ss_pred cCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCCc-----cccccccc
Q 019997 101 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE-----DEVPVKSV 175 (332)
Q Consensus 101 ~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~~-----~~~~V~di 175 (332)
.+...+|+++ .++.++++++|+. ++++.|.+++++.+||+|+ .|+++|+|+.+|++..... ...++.++
T Consensus 19 ~l~~~~v~~~----~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~-~~~~vGivt~~dl~~~~~~~~~~~~~~~v~~~ 92 (152)
T 2uv4_A 19 SLEELQIGTY----ANIAMVRTTTPVY-VALGIFVQHRVSALPVVDE-KGRVVDIYSKFDVINLAAEKTYNNLDVSVTKA 92 (152)
T ss_dssp BHHHHTCSBC----SSCCCEETTCBHH-HHHHHHHHHCCSEEEEECT-TSBEEEEEEHHHHHHHHHCSSCCCTTSBGGGG
T ss_pred hHHHccCCcc----CCceEeCCCCcHH-HHHHHHHHcCCceEeEECC-CCcEEEEEeHHHHHHHhcchhhhhhcchHHHH
Confidence 3366778887 3678899999998 9999999999999999984 4799999999999874321 23578898
Q ss_pred cc------cCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 176 TI------RRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 176 m~------r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
|. ++++++++++++.+|++.|.+++.+.+||+|
T Consensus 93 m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 131 (152)
T 2uv4_A 93 LQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVD 131 (152)
T ss_dssp GGTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred HhhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEEC
Confidence 75 7899999999999999999999999999999
No 46
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.65 E-value=1.8e-15 Score=135.65 Aligned_cols=100 Identities=14% Similarity=0.053 Sum_probs=89.5
Q ss_pred cccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCCccccccccccccCCce
Q 019997 103 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIPR 182 (332)
Q Consensus 103 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~~~~~~V~dim~r~v~~ 182 (332)
..-+++++|++ +++++++++|+. ++++.|.+++++++||+|+ .++++|+|+.+|++.... ..+++++|.+++++
T Consensus 11 ~~~~~~~~~~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~-~~~l~Givt~~dl~~~~~--~~~v~~im~~~~~~ 84 (213)
T 1vr9_A 11 HHMKVKKWVTQ--DFPMVEESATVR-ECLHRMRQYQTNECIVKDR-EGHFRGVVNKEDLLDLDL--DSSVFNKVSLPDFF 84 (213)
T ss_dssp --CBGGGGCBS--CSCEEETTCBHH-HHHHHHHHTTSSEEEEECT-TSBEEEEEEGGGGTTSCT--TSBSGGGCBCTTCC
T ss_pred cccCHHHhhcC--CCeEECCCCcHH-HHHHHHHHCCCCEEEEEcC-CCEEEEEEEHHHHHhhcC--CCcHHHHccCCCEE
Confidence 34578999986 778899999998 9999999999999999984 479999999999987654 46799999899999
Q ss_pred eCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 183 VPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 183 V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
+++++++.+|++.|.+++.+.+||+|
T Consensus 85 v~~~~~l~~a~~~m~~~~~~~lpVvd 110 (213)
T 1vr9_A 85 VHEEDNITHALLLFLEHQEPYLPVVD 110 (213)
T ss_dssp EETTSBHHHHHHHHHHCCCSEEEEEC
T ss_pred ECCCCcHHHHHHHHHHhCCCEEEEEc
Confidence 99999999999999999999999999
No 47
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.64 E-value=1.2e-15 Score=153.23 Aligned_cols=131 Identities=12% Similarity=0.166 Sum_probs=110.9
Q ss_pred ccCHHHHHHHHHhhccccccCCCCC-----HHHHHHHHHHhcCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCC
Q 019997 65 LFRRAELKTLVNLHGNEAGKGGELT-----HDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGH 139 (332)
Q Consensus 65 ~ls~eEL~~lv~~~~~e~~e~G~L~-----~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~ 139 (332)
.++.++|..++.. ++..|.|. +++++++.+++.+ +++|++ +++++++++|+. ++++.|.++++
T Consensus 54 ~vt~~eLa~av~~----~Gg~G~i~~~~~~e~~~~~i~~v~~~-----~~im~~--~~~~v~~~~tv~-ea~~~m~~~~~ 121 (491)
T 1zfj_A 54 TVTGSKMAIAIAR----AGGLGVIHKNMSITEQAEEVRKVKRS-----ENGVII--DPFFLTPEHKVS-EAEELMQRYRI 121 (491)
T ss_dssp TTCSHHHHHHHHH----TTCEEEECCSSCHHHHHHHHHHHHHH-----TTTTSS--SCCCBCSSSBHH-HHHHHHHHTTC
T ss_pred hccHHHHHHHHHH----cCCceEEeCCCCHHHHHHHHHHHhhH-----HhcCcC--CCeEECCCCcHH-HHHHHHHHcCC
Confidence 4677899988873 33334454 6778888888764 679997 778899999998 99999999999
Q ss_pred cEEEEEec-CCCcEEEEEEhhhHhccCCcccccccccccc-CCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 140 SRVPVYYE-EPTNIIGLILVKNLLTIHPEDEVPVKSVTIR-RIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 140 SriPVvd~-~~~~ivGIVt~rDLl~~~~~~~~~V~dim~r-~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
+++||+++ +.++++|+|+.+|++... ....++.++|.+ +++++++++++.++++.|.+++.+.+||+|
T Consensus 122 ~~~pVvd~~~~~~lvGivt~~Dl~~~~-~~~~~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd 191 (491)
T 1zfj_A 122 SGVPIVETLANRKLVGIITNRDMRFIS-DYNAPISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVD 191 (491)
T ss_dssp SEEEEESCTTTCBEEEEEEHHHHHHCS-CSSSBTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEEC
T ss_pred CEEEEEEeCCCCEEEEEEEHHHHhhhc-cCCCcHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEc
Confidence 99999982 357999999999998753 345789999887 899999999999999999999999999999
No 48
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.64 E-value=8.9e-16 Score=142.37 Aligned_cols=129 Identities=14% Similarity=0.215 Sum_probs=105.8
Q ss_pred ccCHHHHHHHHHhhccccccCCCCCHHHHHHHHHHhcCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEE
Q 019997 65 LFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPV 144 (332)
Q Consensus 65 ~ls~eEL~~lv~~~~~e~~e~G~L~~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPV 144 (332)
.+|..||...+.. +... .+...+++.+.+.+|+++|++ +++++.+++++. ++++.|.+++++++||
T Consensus 64 ivT~~Di~~~~~~----~~~~-------~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~~~lpV 129 (296)
T 3ddj_A 64 LLTTRDLLSTVES----YCKD-------SCSQGDLYHISTTPIIDYMTP--NPVTVYNTSDEF-TAINIMVTRNFGSLPV 129 (296)
T ss_dssp EEEHHHHHGGGTT----CC----------CCHHHHHHHHTSBGGGTSEE--SCCCEETTSCHH-HHHHHHHHHTCSEEEE
T ss_pred EEeHHHHHHHhcc----cccc-------cccchhhHHHhcccHHHhccC--CCEEEcCCCCHH-HHHHHHHHcCCCEEEE
Confidence 3677777765531 1000 334556667778899999997 678899999998 9999999999999999
Q ss_pred EecCCCcEEEEEEhhhHhccCCc--cccccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 145 YYEEPTNIIGLILVKNLLTIHPE--DEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 145 vd~~~~~ivGIVt~rDLl~~~~~--~~~~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
+|+ .++++|+++.+|++..... ...+++++|.++++++++++++.++++.|.+++.+.+||+|
T Consensus 130 vd~-~~~lvGivt~~dl~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd 194 (296)
T 3ddj_A 130 VDI-NDKPVGIVTEREFLLLYKDLDEIFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVID 194 (296)
T ss_dssp ECT-TSCEEEEEEHHHHGGGGGGSCCCCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred EcC-CCcEEEEEeHHHHHHhhhcccccccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEc
Confidence 974 4799999999999875432 24589999989999999999999999999999999999999
No 49
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.62 E-value=3.5e-15 Score=136.19 Aligned_cols=100 Identities=14% Similarity=0.228 Sum_probs=87.2
Q ss_pred cccc-ccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCCcc----------------
Q 019997 106 TASD-AMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPED---------------- 168 (332)
Q Consensus 106 tV~d-IMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~~~---------------- 168 (332)
++++ +|++ +++++++++|+. ++++.|.+++++++||++++.|+++|+++.+|++......
T Consensus 4 ~v~~~i~~~--~~~~v~~~~sl~-~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~~~~~~~~~~~~~~~ 80 (280)
T 3kh5_A 4 RVMKIAQNK--KIVTVYPTTTIR-KALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSKYNLIREKHERNFLA 80 (280)
T ss_dssp BGGGTSCCS--CCCCBCTTSBHH-HHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGGGHHHHTTSTTCHHH
T ss_pred hHHHHhcCC--CcEEECCCCcHH-HHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccchhhhhhhccccchhH
Confidence 4555 4554 789999999998 9999999999999999985468999999999998754211
Q ss_pred --ccccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 169 --EVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 169 --~~~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
..+++++|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 81 ~~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd 122 (280)
T 3kh5_A 81 AINEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVN 122 (280)
T ss_dssp HTTSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEEC
T ss_pred HhhhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEc
Confidence 2478999988999999999999999999999999999999
No 50
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.62 E-value=2.1e-15 Score=141.48 Aligned_cols=104 Identities=14% Similarity=0.214 Sum_probs=91.0
Q ss_pred cCcccccccc---cccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCCcc-----cccc
Q 019997 101 ELTEKTASDA---MTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPED-----EVPV 172 (332)
Q Consensus 101 ~l~~~tV~dI---MtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~~~-----~~~V 172 (332)
.+...+++++ |++ +++++++++++. ++++.|.+++++++||+|+ .|+++|+|+.+|++.+...+ ..++
T Consensus 183 ~~~~~~v~~~~~~m~~--~~~~v~~~~~~~-~~~~~m~~~~~~~~pVvd~-~~~~~Giit~~dl~~~~~~~~~~~~~~~v 258 (323)
T 3t4n_C 183 HFLKIPIGDLNIITQD--NMKSCQMTTPVI-DVIQMLTQGRVSSVPIIDE-NGYLINVYEAYDVLGLIKGGIYNDLSLSV 258 (323)
T ss_dssp GGCCSBGGGTTCSBCT--TCCCBCTTSBHH-HHHHHHHHHTCSEEEEECT-TCBEEEEEETTHHHHHHHTTHHHHTTSBH
T ss_pred hhhhCcHHHcCCCCCC--CcEEECCCCcHH-HHHHHHHHcCCCEEEEECC-CCeEEEEEeHHHHHHHHhhchhhhccCCH
Confidence 3556789999 764 778999999998 9999999999999999984 57999999999998753221 3578
Q ss_pred cccccc------CCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 173 KSVTIR------RIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 173 ~dim~r------~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
.++|.+ +++++++++++.+|++.|.+++.+.+||+|
T Consensus 259 ~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd 300 (323)
T 3t4n_C 259 GEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVD 300 (323)
T ss_dssp HHHGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEEC
T ss_pred HHHHhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEEC
Confidence 999877 789999999999999999999999999999
No 51
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.61 E-value=4.1e-15 Score=150.81 Aligned_cols=131 Identities=15% Similarity=0.200 Sum_probs=106.5
Q ss_pred ccCHHHHHHHHHhhccccccCCCCC-----HHHHHHHHHHhcCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCC
Q 019997 65 LFRRAELKTLVNLHGNEAGKGGELT-----HDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGH 139 (332)
Q Consensus 65 ~ls~eEL~~lv~~~~~e~~e~G~L~-----~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~ 139 (332)
.+|+++|...+.. .+.-|.|. +++.+++.+++. .+++|++ +++++++++|+. ++++.|.++++
T Consensus 77 tvTe~~lAia~a~----~GgiGvIh~~~~~~~q~~~V~~V~~-----~~~~m~~--d~v~l~~~~tv~-ea~~~m~~~~~ 144 (511)
T 3usb_A 77 TVTEADMAIAMAR----QGGLGIIHKNMSIEQQAEQVDKVKR-----SESGVIS--DPFFLTPEHQVY-DAEHLMGKYRI 144 (511)
T ss_dssp TTCSHHHHHHHHH----HTCEEEECSSSCHHHHHHHHHHHHT-----SSSCSSS--SCCCBCTTSBHH-HHHHHHHHHCC
T ss_pred hhcHHHHHHHHHh----cCCceeecccCCHHHHHHHHHHhhc-----ccccccc--CCEEECCCCCHH-HHHHHHHHcCC
Confidence 4678888876653 22223343 455667888774 4567875 678899999998 99999999999
Q ss_pred cEEEEEecC-CCcEEEEEEhhhHhccCCcccccccccccc-CCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 140 SRVPVYYEE-PTNIIGLILVKNLLTIHPEDEVPVKSVTIR-RIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 140 SriPVvd~~-~~~ivGIVt~rDLl~~~~~~~~~V~dim~r-~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
+++||++++ .++++|+|+.+|++.. .....++.++|.+ +++++++++++.++++.|++++.+.+||+|
T Consensus 145 s~~pVvd~g~~~~lvGiVt~rDl~~~-~~~~~~V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVD 214 (511)
T 3usb_A 145 SGVPVVNNLDERKLVGIITNRDMRFI-QDYSIKISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVD 214 (511)
T ss_dssp SEEEEESCTTTCBEEEEEEHHHHTTC-CCSSSBHHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEEC
T ss_pred cEEEEEecCCCCEEEEEEEehHhhhh-ccCCCcHHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEe
Confidence 999999841 5799999999999863 3345789999887 899999999999999999999999999999
No 52
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.61 E-value=3e-15 Score=136.59 Aligned_cols=133 Identities=13% Similarity=0.190 Sum_probs=103.5
Q ss_pred ccCHHHHHHHHHhhccccccCCCCCHHHHHHHHHHhcCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEE
Q 019997 65 LFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPV 144 (332)
Q Consensus 65 ~ls~eEL~~lv~~~~~e~~e~G~L~~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPV 144 (332)
.+|.++|...+.. +...+.+. .....+++...+.+|+++|++ +++++++++++. ++++.|.+++++++||
T Consensus 51 ivt~~di~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~V 120 (280)
T 3kh5_A 51 IITSMDIVDFMGG----GSKYNLIR---EKHERNFLAAINEPVREIMEE--NVITLKENADID-EAIETFLTKNVGGAPI 120 (280)
T ss_dssp EEEHHHHHHHTTT----SGGGHHHH---TTSTTCHHHHTTSBGGGTSBC--SCCCEETTCBHH-HHHHHHHHTTCSEEEE
T ss_pred EEEHHHHHHHhcc----cchhhhhh---hccccchhHHhhhhHHHhcCC--CCEEECCCCCHH-HHHHHHHhCCCCEEEE
Confidence 3688888876641 11111111 111223334447899999997 778899999998 9999999999999999
Q ss_pred EecCCCcEEEEEEhhhHhccCCc---cccccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 145 YYEEPTNIIGLILVKNLLTIHPE---DEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 145 vd~~~~~ivGIVt~rDLl~~~~~---~~~~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
+|+ .|+++|+++.+|+++.... ...++.++|.++++++++++++.++++.|.+++.+.+||++
T Consensus 121 vd~-~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv~ 186 (280)
T 3kh5_A 121 VND-ENQLISLITERDVIRALLDKIDENEVIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVVS 186 (280)
T ss_dssp ECT-TCBEEEEEEHHHHHHHHGGGSCTTCBSGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE
T ss_pred EcC-CCEEEEEEEHHHHHHHHhhcCCCCCCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEE
Confidence 984 5799999999999875322 23479999989999999999999999999999999999996
No 53
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.60 E-value=2.1e-15 Score=139.80 Aligned_cols=103 Identities=17% Similarity=0.246 Sum_probs=91.5
Q ss_pred CcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCCc----------cccc
Q 019997 102 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE----------DEVP 171 (332)
Q Consensus 102 l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~~----------~~~~ 171 (332)
....+|+++|++ ++.++++++++. ++++.|.+++++++||+|+ .|+++|+|+.+|++..... ...+
T Consensus 153 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~ 228 (296)
T 3ddj_A 153 DEIFPVKVFMST--KVQTIYKEVRLD-QAVKLMLRRGFRRLPVIDD-DNKVVGIVTVVNAIKQLAKAVDKLDPDYFYGKV 228 (296)
T ss_dssp CCCCBHHHHSBC--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHHHHHHHHTCTHHHHTCB
T ss_pred cccccHHHhhcC--CCeEECCCCCHH-HHHHHHHHcCCCEEEEEcC-CCEEEEEEEHHHHHHHHHHHHhhcChhhhcCcC
Confidence 456789999985 678899999998 9999999999999999984 5799999999999875321 2467
Q ss_pred cccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 172 VKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 172 V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
+.++|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 229 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd 265 (296)
T 3ddj_A 229 VKDVMVTNLVTIDELASVNRAAAEMIVKRIGSLLILN 265 (296)
T ss_dssp HHHHSBCCCCBCCTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEC
Confidence 9999989999999999999999999999999999999
No 54
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.60 E-value=6.6e-16 Score=160.14 Aligned_cols=104 Identities=14% Similarity=0.047 Sum_probs=91.2
Q ss_pred cccccccccccCcceEEEcCCCCHHHHHHHHHH-HcCCcEEEEEecCCCcEEEEEEhhhHhccCCcc-------------
Q 019997 103 TEKTASDAMTPIAETFAIDINAKLDKELMNLIL-EKGHSRVPVYYEEPTNIIGLILVKNLLTIHPED------------- 168 (332)
Q Consensus 103 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~-~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~~~------------- 168 (332)
.+++|+|+|+|++++.++++++|++ ++.+.|. +++++++||+|+ +++++|+|+.+|+++.....
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~-e~~~~~~~~~~~~~~PVvd~-~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~ 528 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQ-HIKGILEKFPNRLVFPVIDA-NGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRT 528 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHH-HHHHHHHHSTTCCEECBBCT-TCBBCCEESHHHHTTTTTTC-------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHH-HHHHHHHhcCCcceEEEEec-CCeEEEEEEHHHHHHHHHHHhhhcccccccccc
Confidence 6789999999988999999999998 9999999 799999999985 57999999999998753211
Q ss_pred --------------------------------------ccccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 169 --------------------------------------EVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 169 --------------------------------------~~~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
..++.++|.+++.+|++++++.++++.|++++.+.+||+|
T Consensus 529 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVve 606 (632)
T 3org_A 529 LVLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVTE 606 (632)
T ss_dssp ------------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEEE
T ss_pred eeccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEEE
Confidence 0027789999999999999999999999999999999996
No 55
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.59 E-value=3.8e-16 Score=157.84 Aligned_cols=132 Identities=17% Similarity=0.255 Sum_probs=101.9
Q ss_pred cccCHHHHHHHHHhhccccccCCCC-----CHHHHHHHHHHhcCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcC
Q 019997 64 ALFRRAELKTLVNLHGNEAGKGGEL-----THDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKG 138 (332)
Q Consensus 64 ~~ls~eEL~~lv~~~~~e~~e~G~L-----~~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~ 138 (332)
..+|++++...+.. .+.-|.| .+++.+++.++ ++++++|++ +++++++++|+. ++++.|.+++
T Consensus 52 dtVTe~~ma~a~a~----~GGiGvI~~n~s~e~qa~~V~~V-----k~~~~~m~~--d~v~v~~~~tv~-ea~~~m~~~~ 119 (496)
T 4fxs_A 52 DTVTEARLAIALAQ----EGGIGFIHKNMSIEQQAAQVHQV-----KIFEAGVVT--HPVTVRPEQTIA-DVMELTHYHG 119 (496)
T ss_dssp TTTCSHHHHHHHHH----HTCEEEECSSSCHHHHHHHHHHH-----HHCCC--CB--CCCCBCSSSBHH-HHHHHHTSSC
T ss_pred chhhHHHHHHHHHH----cCCcceecCCCCHHHHHHHHHhc-----ccccccccc--CceEECCCCCHH-HHHHHHHHcC
Confidence 34788999887763 2333445 66778899998 456888985 778999999998 9999999999
Q ss_pred CcEEEEEecCCCcEEEEEEhhhHhccCCccccccccccc-c-CCceeCCCCCHHHHHHHHHhCCCcEEEEEEc
Q 019997 139 HSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTI-R-RIPRVPETLPLYEILNEFQKGHSHMAVVVRQ 209 (332)
Q Consensus 139 ~SriPVvd~~~~~ivGIVt~rDLl~~~~~~~~~V~dim~-r-~v~~V~e~~~l~eaL~~M~~~~~~~a~VVDE 209 (332)
++++||+++ .++++|+|+.+||+... ....++.++|. + +++++++++++.++++.|++++.+.+||+|+
T Consensus 120 ~s~~PVvd~-~~~lvGiVt~rDL~~~~-~~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe 190 (496)
T 4fxs_A 120 FAGFPVVTE-NNELVGIITGRDVRFVT-DLTKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVND 190 (496)
T ss_dssp CCEEEEECS-SSBEEEEEEHHHHTTCC-CTTSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECT
T ss_pred CcEEEEEcc-CCEEEEEEEHHHHhhcc-cCCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcC
Confidence 999999985 57999999999998533 34578999986 4 6999999999999999999999999999994
No 56
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.59 E-value=3.7e-15 Score=151.16 Aligned_cols=103 Identities=15% Similarity=0.205 Sum_probs=89.1
Q ss_pred CcccccccccccCcceEEEcCC-CCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccC----Ccccccccccc
Q 019997 102 LTEKTASDAMTPIAETFAIDIN-AKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH----PEDEVPVKSVT 176 (332)
Q Consensus 102 l~~~tV~dIMtPr~~VvtV~~d-~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~----~~~~~~V~dim 176 (332)
+...+|+++|++ +++++.++ +|+. ++++.|.+++++++||+|++.++++|+|+.+||++.. .....+|.++|
T Consensus 381 l~~~~V~diM~~--~~vtv~~~~~tv~-ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~~~~~V~~im 457 (527)
T 3pc3_A 381 WWSLAIAELELP--APPVILKSDATVG-EAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQSDPAIKAL 457 (527)
T ss_dssp TTTSBGGGGCCC--CCSCCEETTCBHH-HHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCCCTTSBGGGGE
T ss_pred ccCCcHHHhCcC--CCeEEcCCCCcHH-HHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccCcCCCcHHHHh
Confidence 557899999996 67889999 9998 9999999999999999983457999999999998642 12346899999
Q ss_pred ccCCceeCCCCCHHHHHHHHHhCCCcEEEEEEc
Q 019997 177 IRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQ 209 (332)
Q Consensus 177 ~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVDE 209 (332)
.+++++|++++++.++++.|.+++ ++||+|+
T Consensus 458 ~~~~~~v~~~~~l~~a~~~m~~~~--~~pVVd~ 488 (527)
T 3pc3_A 458 NKRVIRLNESEILGKLARVLEVDP--SVLILGK 488 (527)
T ss_dssp ETTCCEEETTSBHHHHHHHHTTCS--EEEEEEE
T ss_pred cCCCeEECCCCcHHHHHHHHhhCC--EEEEEeC
Confidence 999999999999999999997665 5799994
No 57
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.59 E-value=5.2e-15 Score=137.16 Aligned_cols=60 Identities=12% Similarity=0.163 Sum_probs=53.5
Q ss_pred cCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecC-CCcEEEEEEhhhHhc
Q 019997 101 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEE-PTNIIGLILVKNLLT 163 (332)
Q Consensus 101 ~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~-~~~ivGIVt~rDLl~ 163 (332)
....++|+|+|++ +++++.+++++. ++.+.|.+++++++||++++ .++++|+|+.+||+.
T Consensus 9 ~~~~~~v~diMt~--~vvtv~~~~tv~-~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~ 69 (250)
T 2d4z_A 9 NKYNIQVGDIMVR--DVTSIASTSTYG-DLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEG 69 (250)
T ss_dssp CCSSCBTTSSSBS--SCCCEETTCBHH-HHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHH
T ss_pred ccCCCChHHhcCC--CCeEECCCCCHH-HHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHH
Confidence 4567899999996 789999999998 99999999999999999854 367999999999975
No 58
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.59 E-value=2.6e-15 Score=136.44 Aligned_cols=101 Identities=13% Similarity=0.175 Sum_probs=88.0
Q ss_pred ccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCCc----------------
Q 019997 104 EKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE---------------- 167 (332)
Q Consensus 104 ~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~~---------------- 167 (332)
..+|+++|++ ++.++++++++. ++++.|.+++++++||+|+ .|+++|+|+.+|+++....
T Consensus 6 ~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~~~lpVvd~-~~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~ 81 (245)
T 3l2b_A 6 KLKVEDLEMD--KIAPLAPEVSLK-MAWNIMRDKNLKSIPVADG-NNHLLGMLSTSNITATYMDIWDSNILAKSATSLDN 81 (245)
T ss_dssp CCBGGGSCCB--CCCCBCTTCBHH-HHHHHHHHTTCSEEEEECT-TCBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHH
T ss_pred cCcHHHhcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEcC-CCEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHH
Confidence 4689999986 678899999998 9999999999999999984 4799999999999753100
Q ss_pred --------------------------------------------------------------------------------
Q 019997 168 -------------------------------------------------------------------------------- 167 (332)
Q Consensus 168 -------------------------------------------------------------------------------- 167 (332)
T Consensus 82 v~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgdr~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~ 161 (245)
T 3l2b_A 82 ILDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAK 161 (245)
T ss_dssp HHHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECSCHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHH
T ss_pred HHHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHH
Confidence
Q ss_pred ---------------------cccccccccc-cCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 168 ---------------------DEVPVKSVTI-RRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 168 ---------------------~~~~V~dim~-r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
...+++++|. +++.++++++++.+|++.|.+++.+.+||+|
T Consensus 162 ~~~~~~i~t~~d~~~~~~~~~~~~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd 224 (245)
T 3l2b_A 162 KNNITVITTPHDSFTASRLIVQSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVID 224 (245)
T ss_dssp HHTCEEEECSSCHHHHHHHGGGGSBHHHHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEEC
T ss_pred HcCCeEEEeCCChHHHHHHHhcCCceeeEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEc
Confidence 0235778888 8999999999999999999999999999999
No 59
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.57 E-value=1e-14 Score=133.73 Aligned_cols=102 Identities=16% Similarity=0.163 Sum_probs=88.9
Q ss_pred cccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHh------ccCC----------
Q 019997 103 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLL------TIHP---------- 166 (332)
Q Consensus 103 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl------~~~~---------- 166 (332)
.+.+++++|++ ++.++++++++. ++++.|.+++++++||+++ .|+++|+++.+|++ +...
T Consensus 124 ~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~-~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~ 199 (282)
T 2yzq_A 124 KGVEIEPYYQR--YVSIVWEGTPLK-AALKALLLSNSMALPVVDS-EGNLVGIVDETDLLRDSEIVRIMKSTELAASSEE 199 (282)
T ss_dssp GGCBSTTTSBS--CCCCEETTSBHH-HHHHHHHTCSSSEEEEECT-TSCEEEEEEGGGGGGCGGGCC-------------
T ss_pred ccCcHHHHhCC--CCEEECCCCCHH-HHHHHHHHcCCcEEEEEcC-CCeEEEEEEHHHHhhhhhhhhhhccchhhhhhhh
Confidence 46789999975 677899999998 9999999999999999974 46899999999998 4321
Q ss_pred ------------------ccccccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 167 ------------------EDEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 167 ------------------~~~~~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
....+++++|.+++.++++++++.+|++.|.+++.+.+||+|
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 259 (282)
T 2yzq_A 200 EWILESHPTLLFEKFELQLPNKPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQLPVIR 259 (282)
T ss_dssp -------------------CCCBGGGTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE
T ss_pred hhhcccchHHHHhHhhhhhccCCHHHhcCCCCceeCCCCCHHHHHHHHHHcCcceeEEEC
Confidence 013579999999999999999999999999999999999999
No 60
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.55 E-value=7e-15 Score=134.78 Aligned_cols=98 Identities=21% Similarity=0.237 Sum_probs=70.5
Q ss_pred cccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCCccccccccccccCCceeC
Q 019997 105 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIPRVP 184 (332)
Q Consensus 105 ~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~~~~~~V~dim~r~v~~V~ 184 (332)
++|+++|++ +++++++++|+. ++++.|.+++++++||+++ .|+++|+++.+|++.... ..+++++|.+++++++
T Consensus 1 m~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~pV~d~-~~~~~Giv~~~dl~~~~~--~~~v~~~m~~~~~~v~ 74 (282)
T 2yzq_A 1 MRVKTIMTQ--NPVTITLPATRN-YALELFKKYKVRSFPVVNK-EGKLVGIISVKRILVNPD--EEQLAMLVKRDVPVVK 74 (282)
T ss_dssp CBHHHHSEE--SCCCEESSCC-------------CCEEEEECT-TCCEEEEEESSCC------------CCCBSCCCEEE
T ss_pred CchHHhccC--CCeEECCCCcHH-HHHHHHHHcCCCeEEEEcC-CCcEEEEEEHHHHHhhhc--cCCHHHHcCCCCcEEC
Confidence 468999995 778899999998 9999999999999999984 579999999999987543 3579999888899999
Q ss_pred CCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 185 ETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 185 e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
+++++.+|++.|.+++.+.+||+|
T Consensus 75 ~~~~l~~a~~~m~~~~~~~~~Vvd 98 (282)
T 2yzq_A 75 ENDTLKKAAKLMLEYDYRRVVVVD 98 (282)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred CCCcHHHHHHHHHHcCCCEEEEEc
Confidence 999999999999999999999999
No 61
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.53 E-value=1.4e-15 Score=153.80 Aligned_cols=132 Identities=8% Similarity=0.095 Sum_probs=19.9
Q ss_pred ccCHHHHHHHHHhhccccccCCC----CC-HHHHHHHHHHhcCcccccccc-cccCcceEEEcCCCCHHHHHHHHHHHcC
Q 019997 65 LFRRAELKTLVNLHGNEAGKGGE----LT-HDETTIIAGALELTEKTASDA-MTPIAETFAIDINAKLDKELMNLILEKG 138 (332)
Q Consensus 65 ~ls~eEL~~lv~~~~~e~~e~G~----L~-~eE~~~I~~vl~l~~~tV~dI-MtPr~~VvtV~~d~tv~~eal~~m~~~~ 138 (332)
..+++++...+... +..|. ++ +++.+++.++.. .++ |++ +++++++++|+. ++++.|.+++
T Consensus 61 ~vt~~~la~~la~~----gg~G~I~~~~~~e~~~~~v~~V~~------~e~gM~~--~~~~v~~~~tv~-eal~~m~~~~ 127 (503)
T 1me8_A 61 SVSGEKMAIALARE----GGISFIFGSQSIESQAAMVHAVKN------FKAGFVV--SDSNVKPDQTFA-DVLAISQRTT 127 (503)
T ss_dssp TTCSHHHHHHHHHT----TCEEEECCSSCHHHHHHHHHHHHT------TTC-----------------------------
T ss_pred hhhHHHHHHHHHhC----CCcceeeCCCCHHHHHHHHhhhhh------cccCccc--CCeEECCCCcHH-HHHHHHHHcC
Confidence 45778888777632 11122 23 456777766654 345 987 788999999998 9999999999
Q ss_pred CcEEEEEecC--CCcEEEEEEhhhHhccCCccccccccccccC--CceeCCCCCHHHHHHHHHhCCCcEEEEEEc
Q 019997 139 HSRVPVYYEE--PTNIIGLILVKNLLTIHPEDEVPVKSVTIRR--IPRVPETLPLYEILNEFQKGHSHMAVVVRQ 209 (332)
Q Consensus 139 ~SriPVvd~~--~~~ivGIVt~rDLl~~~~~~~~~V~dim~r~--v~~V~e~~~l~eaL~~M~~~~~~~a~VVDE 209 (332)
++++||++++ .++++|+|+.+|++........+++++|.++ ++++++++++.+|++.|++++.+.+||+|+
T Consensus 128 ~s~~pVvd~~~~~g~lvGiVt~~Dl~~~~~~~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe 202 (503)
T 1me8_A 128 HNTVAVTDDGTPHGVLLGLVTQRDYPIDLTQTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDD 202 (503)
T ss_dssp ---------------------------------------------------------------------------
T ss_pred ceEEEEEECCCcCCeEEEEEEHHHHHhhhccccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcC
Confidence 9999999853 2799999999999863223356899998776 999999999999999999999999999993
No 62
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.53 E-value=4.8e-14 Score=132.85 Aligned_cols=102 Identities=13% Similarity=0.218 Sum_probs=88.4
Q ss_pred ccccccc---ccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCCc-----ccccccc
Q 019997 103 TEKTASD---AMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE-----DEVPVKS 174 (332)
Q Consensus 103 ~~~tV~d---IMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~~-----~~~~V~d 174 (332)
...++++ +|++ ++.++++++++. ++++.|.+++++++||+++ .|+++|+|+.+|++..... ...++.+
T Consensus 180 ~~~~v~~l~~~m~~--~~~~v~~~~~~~-~~~~~m~~~~~~~~~Vvd~-~~~~~Giit~~dl~~~~~~~~~~~~~~~v~~ 255 (334)
T 2qrd_G 180 LRVPLNQMTIGTWS--NLATASMETKVY-DVIKMLAEKNISAVPIVNS-EGTLLNVYESVDVMHLIQDGDYSNLDLSVGE 255 (334)
T ss_dssp CCCBGGGSSCSBCS--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEECT-TCBEEEEEETHHHHHHHTTSCGGGGGSBHHH
T ss_pred hhCcHHHhCCcccC--CceEECCCCcHH-HHHHHHHHcCCcEEEEEcC-CCcEEEEEEHHHHHHHhhccccccccCcHHH
Confidence 4577889 4875 678899999998 9999999999999999984 4799999999999874322 2357889
Q ss_pred cccc------CCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 175 VTIR------RIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 175 im~r------~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
+|.+ +++++++++++.+|++.|.+++.+.+||+|
T Consensus 256 ~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd 295 (334)
T 2qrd_G 256 ALLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVD 295 (334)
T ss_dssp HHTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEEC
T ss_pred HHhcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEC
Confidence 9874 899999999999999999999999999999
No 63
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.51 E-value=2.7e-15 Score=151.01 Aligned_cols=130 Identities=16% Similarity=0.256 Sum_probs=23.3
Q ss_pred ccCHHHHHHHHHhhccccccCCCCC-----HHHHHHHHHHhcCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCC
Q 019997 65 LFRRAELKTLVNLHGNEAGKGGELT-----HDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGH 139 (332)
Q Consensus 65 ~ls~eEL~~lv~~~~~e~~e~G~L~-----~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~ 139 (332)
..+..++...+.. .+..|.|. +++++++.+++++.+ +|++ +++++++++|+. ++++.|.++++
T Consensus 57 ~vt~~ela~ava~----~GglG~i~~~~~~e~~~~~I~~v~~~~~-----~m~~--~~~~v~~~~tv~-ea~~~~~~~~~ 124 (486)
T 2cu0_A 57 TVTEWEMAVAMAR----EGGLGVIHRNMGIEEQVEQVKRVKRAER-----LIVE--DVITIAPDETVD-FALFLMEKHGI 124 (486)
T ss_dssp TTCSHHHHHHHHH----TTCEEEECSSSCHHHHHHHHHHHHTCC------------------------------------
T ss_pred eecHHHHHHHHHh----cCCceeecCCCCHHHHHHHHHhhcchhh-----cccc--CceEECCCCCHH-HHHHHHHHcCC
Confidence 4577888877763 23334443 577899999987744 6875 789999999998 99999999999
Q ss_pred cEEEEEecCCCcEEEEEEhhhHhccCCccccccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEEcCC
Q 019997 140 SRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYN 211 (332)
Q Consensus 140 SriPVvd~~~~~ivGIVt~rDLl~~~~~~~~~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVDEyG 211 (332)
+++||+++ ++++|+|+.+|++. ....++.++|.++++++++++++.++++.|++++.+.+||+|++|
T Consensus 125 ~~~pVvd~--~~lvGivt~~Dl~~---~~~~~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g 191 (486)
T 2cu0_A 125 DGLPVVED--EKVVGIITKKDIAA---REGKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERG 191 (486)
T ss_dssp ------------------------------------------------------------------------
T ss_pred cEEEEEEC--CEEEEEEEHHHhcc---CCCCCHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCC
Confidence 99999985 79999999999986 345689999888999999999999999999999999999999544
No 64
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.51 E-value=2.3e-15 Score=151.88 Aligned_cols=131 Identities=17% Similarity=0.255 Sum_probs=23.4
Q ss_pred cccCHHHHHHHHHhhccccccCCCCC-----HHHHHHHHHHhcCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcC
Q 019997 64 ALFRRAELKTLVNLHGNEAGKGGELT-----HDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKG 138 (332)
Q Consensus 64 ~~ls~eEL~~lv~~~~~e~~e~G~L~-----~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~ 138 (332)
..+|+++|...+... +..|.|. +++.+++.++. +++++|++ +++++++++|+. ++++.|.+++
T Consensus 51 ~tVTe~~lA~ala~~----GGiGvI~~~~~~e~~a~~v~~vk-----~~~~~m~~--~~v~v~~~~tv~-ea~~~m~~~~ 118 (490)
T 4avf_A 51 DTVTEARLAIAMAQE----GGIGIIHKNMGIEQQAAEVRKVK-----KHETAIVR--DPVTVTPSTKII-ELLQMAREYG 118 (490)
T ss_dssp TTTCSHHHHHHHHHH----TSEEEECCSSCHHHHHHHHHHHH-----HCCC-----------------------------
T ss_pred hhhCHHHHHHHHHHc----CCCccccCCCCHHHHHHHhhhhc-----ccccCccc--CceEeCCCCcHH-HHHHHHHHhC
Confidence 346889998777632 2234444 55677777774 46888985 778999999998 9999999999
Q ss_pred CcEEEEEecCCCcEEEEEEhhhHhccCCccccccccccc-c-CCceeCCCCCHHHHHHHHHhCCCcEEEEEEc
Q 019997 139 HSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTI-R-RIPRVPETLPLYEILNEFQKGHSHMAVVVRQ 209 (332)
Q Consensus 139 ~SriPVvd~~~~~ivGIVt~rDLl~~~~~~~~~V~dim~-r-~v~~V~e~~~l~eaL~~M~~~~~~~a~VVDE 209 (332)
++++||++ .++++|+|+.+||.... ....++.++|. + +++++++++++.++++.|++++.+.+||+|+
T Consensus 119 ~s~~pVvd--~g~lvGIVt~rDl~~~~-~~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe 188 (490)
T 4avf_A 119 FSGFPVVE--QGELVGIVTGRDLRVKP-NAGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDE 188 (490)
T ss_dssp -------------------------------------------------------------------------
T ss_pred CCEEEEEE--CCEEEEEEEhHHhhhcc-ccCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcC
Confidence 99999998 47999999999997532 33568999987 4 6999999999999999999999999999993
No 65
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.48 E-value=2.1e-13 Score=128.43 Aligned_cols=101 Identities=17% Similarity=0.227 Sum_probs=85.7
Q ss_pred cccccc--cccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCCcc-----cccccccc-
Q 019997 105 KTASDA--MTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPED-----EVPVKSVT- 176 (332)
Q Consensus 105 ~tV~dI--MtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~~~-----~~~V~dim- 176 (332)
.+++++ |+ ..++.++++++++. ++++.|.+++++++||+++ .|+++|+|+.+|++...... ..++.++|
T Consensus 190 ~~v~~~~v~~-~~~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~-~~~l~Giit~~dl~~~~~~~~~~~~~~~v~~~~~ 266 (330)
T 2v8q_E 190 KSLEELQIGT-YANIAMVRTTTPVY-VALGIFVQHRVSALPVVDE-KGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQ 266 (330)
T ss_dssp SBHHHHTCSB-CSSCCCEETTCBHH-HHHHHHHHHCCSEEEEECT-TSBEEEEEEGGGTGGGGGSSCCCCCSSBHHHHGG
T ss_pred CCHHHhcccC-cCCceEECCCCCHH-HHHHHHHHcCCCeEEEECC-CCcEEEEEEHHHHHHHHhccccccccCcHHHHHh
Confidence 455665 54 14678899999998 9999999999999999984 47999999999998754321 35788887
Q ss_pred -----ccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 177 -----IRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 177 -----~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 267 ~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd 303 (330)
T 2v8q_E 267 HRSHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVD 303 (330)
T ss_dssp GCCSCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred ccccccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEc
Confidence 47899999999999999999999999999999
No 66
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.33 E-value=2.2e-13 Score=136.97 Aligned_cols=111 Identities=14% Similarity=0.217 Sum_probs=7.6
Q ss_pred CCHHH-HHHHHHHhcCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCC
Q 019997 88 LTHDE-TTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP 166 (332)
Q Consensus 88 L~~eE-~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~ 166 (332)
++.++ ++.+.+++ +++++|++ +++++++++|+. ++++.|.+++++.+||+|+ .++++|+|+.+|++...
T Consensus 82 ~~~e~~~~~v~~v~-----~~~~iM~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~-~~~lvGivt~~Dl~~~~- 151 (494)
T 1vrd_A 82 LTPDEQARQVSIVK-----KTENGIIY--DPITVTPDMTVK-EAIDLMAEYKIGGLPVVDE-EGRLVGLLTNRDVRFEK- 151 (494)
T ss_dssp SCHHHHHHHHHHHH-----TC-----------------------------------------------------------
T ss_pred CChHHHHHHHHhhh-----hHhhcCcc--CCeEECCCCCHH-HHHHHHHHcCceEEEEEcC-CCEEEEEEEHHHHHhhc-
Confidence 45543 45566554 35788986 788999999998 9999999999999999984 46999999999998642
Q ss_pred cccccccccccc--CCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 167 EDEVPVKSVTIR--RIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 167 ~~~~~V~dim~r--~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
....++.++|.+ +++++++++++.++++.|.+++.+.+||+|
T Consensus 152 ~~~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd 195 (494)
T 1vrd_A 152 NLSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVS 195 (494)
T ss_dssp --------------------------------------------
T ss_pred CCCCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEc
Confidence 234689999887 899999999999999999999999999999
No 67
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.22 E-value=1.7e-12 Score=130.95 Aligned_cols=110 Identities=11% Similarity=0.266 Sum_probs=9.9
Q ss_pred HHHHHHHHHHhcCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecC--CCcEEEEEEhhhHhccCCc
Q 019997 90 HDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEE--PTNIIGLILVKNLLTIHPE 167 (332)
Q Consensus 90 ~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~--~~~ivGIVt~rDLl~~~~~ 167 (332)
+++.++++.+-++.. .|+. +.+++.++.|+. ++.+++.+++++.+||+++. +++++|||+.+|+... +
T Consensus 128 e~Qa~~V~~VKr~e~-----g~i~--dPvtl~P~~Tv~-da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~--d 197 (556)
T 4af0_A 128 EEQAAMVRRVKKYEN-----GFIT--DPLCLGPDATVG-DVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ--D 197 (556)
T ss_dssp HHHHHHHHHHHHCCC-----------------------------------------------------------------
T ss_pred HHHHHHHHHHHhccc-----CccC--CCeEcCCCCCHH-HHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc--c
Confidence 345677888876654 3442 568899999998 99999999999999999843 4689999999999763 3
Q ss_pred cccccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEEc
Q 019997 168 DEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQ 209 (332)
Q Consensus 168 ~~~~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVDE 209 (332)
...+|+++|+.++++++++.++.+|.+.|++++...+||||+
T Consensus 198 ~~~~V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~ 239 (556)
T 4af0_A 198 AETPIKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDS 239 (556)
T ss_dssp ------------------------------------------
T ss_pred cceEhhhhcccceEEecCCCCHHHHHHHHHHccccceeEEcc
Confidence 457899999999999999999999999999999999999994
No 68
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.17 E-value=7.3e-13 Score=134.02 Aligned_cols=107 Identities=9% Similarity=0.231 Sum_probs=61.5
Q ss_pred ccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecC--CCcEEEEEEhhhHhccCC-cccccccccccc--CC
Q 019997 106 TASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEE--PTNIIGLILVKNLLTIHP-EDEVPVKSVTIR--RI 180 (332)
Q Consensus 106 tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~--~~~ivGIVt~rDLl~~~~-~~~~~V~dim~r--~v 180 (332)
+++++|++ +++++++++|+. ++++.|.+++++++||+|++ .++++|+|+.+|+..... ....++.++|.+ ++
T Consensus 109 ~~~~im~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~~~~~~~v~~vm~~~~~~ 185 (514)
T 1jcn_A 109 NFEQGFIT--DPVVLSPSHTVG-DVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEKDHTTLLSEVMTPRIEL 185 (514)
T ss_dssp TCCTTSCS--SCCCCCC------------------CEESCC--------CCEECTTTTC----------------CCBCC
T ss_pred hhhhcccc--CCEEECCCCCHH-HHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhhccCCCCHHHHhCCCCCC
Confidence 68899986 567899999998 99999999999999999853 479999999999986421 234689999887 89
Q ss_pred ceeCCCCCHHHHHHHHHhCCCcEEEEEEcCCCCCC
Q 019997 181 PRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAE 215 (332)
Q Consensus 181 ~~V~e~~~l~eaL~~M~~~~~~~a~VVDEyG~~~~ 215 (332)
+++++++++.++++.|.+++.+.+||||+.|...|
T Consensus 186 ~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvG 220 (514)
T 1jcn_A 186 VVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVA 220 (514)
T ss_dssp CCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC-
T ss_pred eEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEE
Confidence 99999999999999999999999999996555433
No 69
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.85 E-value=6.3e-09 Score=77.75 Aligned_cols=65 Identities=12% Similarity=0.298 Sum_probs=54.6
Q ss_pred ceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccC-Cc----cccccccccccCCcee
Q 019997 116 ETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH-PE----DEVPVKSVTIRRIPRV 183 (332)
Q Consensus 116 ~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~-~~----~~~~V~dim~r~v~~V 183 (332)
+++++.+++|+. ++++.|.+++++++||+++ |+++|+++.+|+++.. .. ...+++++|.+++.+|
T Consensus 1 k~vtv~p~~tv~-ea~~~M~~~~i~~~~V~d~--~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~~~iTV 70 (70)
T 3ghd_A 1 KAIVVQPKDTVD-RVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp CEEEECTTCBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CCEEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCCCCeEC
Confidence 367899999998 9999999999999999973 6899999999997532 21 2468999999988764
No 70
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.73 E-value=2.9e-08 Score=72.22 Aligned_cols=64 Identities=13% Similarity=0.277 Sum_probs=54.0
Q ss_pred eEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCC-----ccccccccccccCCcee
Q 019997 117 TFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP-----EDEVPVKSVTIRRIPRV 183 (332)
Q Consensus 117 VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~-----~~~~~V~dim~r~v~~V 183 (332)
++++++++++. ++++.|.+++++++||+++ ++++|+|+.+|++++.. ....+++++|.+++.+|
T Consensus 2 ~~~v~~~~~~~-~a~~~m~~~~~~~~pV~d~--~~l~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~~~v 70 (70)
T 3fio_A 2 AIVVQPKDTVD-RVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp EEEECTTCBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CeEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHHcCCCcccCCHHHhcCCCCeEC
Confidence 57899999998 9999999999999999984 79999999999987532 12467999988777653
No 71
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.66 E-value=1.4e-08 Score=90.64 Aligned_cols=104 Identities=13% Similarity=0.196 Sum_probs=52.5
Q ss_pred ccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCCccccccccccccCCc-e
Q 019997 104 EKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIP-R 182 (332)
Q Consensus 104 ~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~~~~~~V~dim~r~v~-~ 182 (332)
+.+|+++|++ +++++++++++. ++++.|.+++++++||+|+ .|+++|+|+.+|++...... ..+.+.+.+-.+ +
T Consensus 71 ~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~-~g~lvGiit~~Dil~~~~~~-~~~~~~~~~l~~~~ 145 (213)
T 1vr9_A 71 DSSVFNKVSL--PDFFVHEEDNIT-HALLLFLEHQEPYLPVVDE-EMRLKGAVSLHDFLEALIEA-LAMDVPGIRFSVLL 145 (213)
T ss_dssp TSBSGGGCBC--TTCCEETTSBHH-HHHHHHHHCCCSEEEEECT-TCBEEEEEEHHHHHHHHHHS-CC------------
T ss_pred CCcHHHHccC--CCEEECCCCcHH-HHHHHHHHhCCCEEEEEcC-CCEEEEEEEHHHHHHHHHHH-hcCCCCcEEEEEEe
Confidence 4569999997 678899999998 9999999999999999984 47999999999998753221 112333222111 1
Q ss_pred eCCCCCHHHHHHHHHhCCCcEEEEEEcCCC
Q 019997 183 VPETLPLYEILNEFQKGHSHMAVVVRQYNK 212 (332)
Q Consensus 183 V~e~~~l~eaL~~M~~~~~~~a~VVDEyG~ 212 (332)
.....++.++++.|.+++.+.++|++.+|.
T Consensus 146 ~~~~~~l~~~~~~l~~~~~~~l~V~~~~~~ 175 (213)
T 1vr9_A 146 EDKPGELRKVVDALALSNINILSVITTRSG 175 (213)
T ss_dssp ------------------------------
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEEEEecC
Confidence 133445999999999999999999885554
No 72
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.38 E-value=2.1e-07 Score=79.32 Aligned_cols=40 Identities=20% Similarity=0.253 Sum_probs=38.3
Q ss_pred ccccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 169 EVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 169 ~~~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
+.+|+++|.+++++|++++++.+|++.|.+++.+.+||+|
T Consensus 17 ~~~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd 56 (170)
T 4esy_A 17 QVPIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVD 56 (170)
T ss_dssp TSBGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEc
Confidence 4689999999999999999999999999999999999999
No 73
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.24 E-value=1e-06 Score=73.60 Aligned_cols=59 Identities=24% Similarity=0.332 Sum_probs=53.1
Q ss_pred CcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccC
Q 019997 102 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 165 (332)
Q Consensus 102 l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~ 165 (332)
....+++++|++ ++.++++++++. ++++.|.+++++++||+| + |+++|+|+.+|++...
T Consensus 75 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd-~-g~~~Giit~~dil~~l 133 (157)
T 4fry_A 75 SKATRVEEIMTA--KVRYVEPSQSTD-ECMALMTEHRMRHLPVLD-G-GKLIGLISIGDLVKSV 133 (157)
T ss_dssp SSSCBHHHHSBS--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHH
T ss_pred ccccCHHHHcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEE-C-CEEEEEEEHHHHHHHH
Confidence 467899999997 678899999998 999999999999999998 3 7999999999998753
No 74
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.23 E-value=2.3e-06 Score=63.66 Aligned_cols=29 Identities=14% Similarity=0.098 Sum_probs=27.7
Q ss_pred CceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 180 IPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 180 v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
+++|.+++++.+|++.|.+++.+.+||+|
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d 30 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME 30 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE
Confidence 57899999999999999999999999999
No 75
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.22 E-value=2.4e-06 Score=67.89 Aligned_cols=59 Identities=17% Similarity=0.289 Sum_probs=51.8
Q ss_pred cccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccC
Q 019997 103 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 165 (332)
Q Consensus 103 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~ 165 (332)
...+++++|++ ++.++++++++. ++++.|.+++.+++||++ +.|+++|+|+.+|++.+.
T Consensus 60 ~~~~v~~~~~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd-~~g~~~Givt~~dl~~~l 118 (122)
T 3kpb_A 60 NKKTIEEIMTR--NVITAHEDEPVD-HVAIKMSKYNISGVPVVD-DYRRVVGIVTSEDISRLF 118 (122)
T ss_dssp TCCBGGGTSBS--SCCCEETTSBHH-HHHHHHHHHTCSEEEEEC-TTCBEEEEEEHHHHHHHH
T ss_pred cccCHHHHhcC--CCeEECCCCCHH-HHHHHHHHhCCCeEEEEC-CCCCEEEEEeHHHHHHHh
Confidence 34489999986 667899999998 999999999999999998 457999999999998753
No 76
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.21 E-value=2.7e-06 Score=76.64 Aligned_cols=40 Identities=13% Similarity=0.186 Sum_probs=37.9
Q ss_pred ccccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 169 EVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 169 ~~~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
..+++++|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 6 ~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd 45 (245)
T 3l2b_A 6 KLKVEDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVAD 45 (245)
T ss_dssp CCBGGGSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEEC
T ss_pred cCcHHHhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEc
Confidence 3579999999999999999999999999999999999999
No 77
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.21 E-value=1.3e-06 Score=69.54 Aligned_cols=60 Identities=22% Similarity=0.298 Sum_probs=53.4
Q ss_pred cCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccC
Q 019997 101 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 165 (332)
Q Consensus 101 ~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~ 165 (332)
.+.+.+++++|++ ++.++++++++. ++++.|.+++++++||+++ |+++|+|+.+|++...
T Consensus 61 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~--~~~~Gvit~~dl~~~l 120 (125)
T 1pbj_A 61 DLAEVKVWEVMER--DLVTISPRATIK-EAAEKMVKNVVWRLLVEED--DEIIGVISATDILRAK 120 (125)
T ss_dssp CTTTSBHHHHCBC--GGGEECTTSCHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHH
T ss_pred cccccCHHHHcCC--CCeEECCCCCHH-HHHHHHHhcCCcEEEEEEC--CEEEEEEEHHHHHHHH
Confidence 3467889999986 677899999998 9999999999999999984 7999999999998753
No 78
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.19 E-value=2.3e-06 Score=71.93 Aligned_cols=62 Identities=21% Similarity=0.281 Sum_probs=55.0
Q ss_pred cCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCC---cEEEEEEhhhHhcc
Q 019997 101 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPT---NIIGLILVKNLLTI 164 (332)
Q Consensus 101 ~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~---~ivGIVt~rDLl~~ 164 (332)
.....+|+++|+++.+++++++++++. ++++.|.+++++++||+++ .| +++|+|+.+|++.+
T Consensus 77 ~~~~~~v~~~m~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~-~g~~~~~vGiit~~dil~~ 141 (159)
T 3fv6_A 77 ELTSVPVHIIMTRMPNITVCRREDYVM-DIAKHLIEKQIDALPVIKD-TDKGFEVIGRVTKTNMTKI 141 (159)
T ss_dssp CTTTCBGGGTSEETTSCCCBCTTSBHH-HHHHHHHHHTCSEEEEEEE-CSSSEEEEEEEEHHHHHHH
T ss_pred cccCcCHHHHHcCCCCcEEECCCCCHH-HHHHHHHHcCCcEEEEEeC-CCcceeEEEEEEHHHHHHH
Confidence 456789999999766788899999998 9999999999999999984 45 89999999999874
No 79
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.14 E-value=7.2e-06 Score=70.02 Aligned_cols=72 Identities=14% Similarity=0.185 Sum_probs=58.0
Q ss_pred CCCCHHHHHHHHHHhcCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhcc
Q 019997 86 GELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 164 (332)
Q Consensus 86 G~L~~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~ 164 (332)
|.++..+ ++.....-...+++++| + ++.++++++++. ++++.|.+++..++||+| +.|+++|+|+.+|++..
T Consensus 90 Givt~~d--l~~~~~~~~~~~v~~im-~--~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd-~~g~lvGiit~~Dil~~ 161 (172)
T 3lhh_A 90 GIISAKQ--LLSESIAGERLELVDLV-K--NCNFVPNSLSGM-ELLEHFRTTGSQMVFVVD-EYGDLKGLVTLQDMMDA 161 (172)
T ss_dssp EEEEHHH--HHHHHHTTCCCCGGGGC-B--CCEEEETTCCHH-HHHHHHHHHTCSEEEEEC-TTSCEEEEEEHHHHHHH
T ss_pred EEEEHHH--HHHHHhhcCcccHHHHh-c--CCeEeCCCCCHH-HHHHHHHHcCCeEEEEEe-CCCCEEEEeeHHHHHHH
Confidence 4455433 44444444578899999 4 678999999998 999999999999999998 45799999999999874
No 80
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.13 E-value=4.2e-06 Score=67.89 Aligned_cols=59 Identities=24% Similarity=0.406 Sum_probs=52.9
Q ss_pred CcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccC
Q 019997 102 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 165 (332)
Q Consensus 102 l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~ 165 (332)
....+++++|++ ++.++++++++. ++++.|.+++.+++||++ + |+++|+|+.+|++...
T Consensus 71 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd-~-g~~~Giit~~dll~~~ 129 (135)
T 2rc3_A 71 VKDTQVKEIMTR--QVAYVDLNNTNE-DCMALITEMRVRHLPVLD-D-GKVIGLLSIGDLVKDA 129 (135)
T ss_dssp GGGSBGGGTSBC--SCCCBCTTCBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHH
T ss_pred cccCCHHHhccC--CCeEECCCCcHH-HHHHHHHHhCCCEEEEEe-C-CEEEEEEEHHHHHHHH
Confidence 467889999987 678899999998 999999999999999998 4 7999999999998753
No 81
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.12 E-value=3.1e-06 Score=68.38 Aligned_cols=59 Identities=19% Similarity=0.303 Sum_probs=52.0
Q ss_pred cccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccC
Q 019997 103 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 165 (332)
Q Consensus 103 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~ 165 (332)
...+++++|++ ++.++++++++. ++++.|.+++.+++||+++ .|+++|+|+.+|++...
T Consensus 65 ~~~~v~~~~~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~-~g~~~Giit~~dll~~~ 123 (133)
T 2ef7_A 65 LETKAEEFMTA--SLITIREDSPIT-GALALMRQFNIRHLPVVDD-KGNLKGIISIRDITRAI 123 (133)
T ss_dssp TTCBGGGTSEE--CCCCEETTSBHH-HHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHH
T ss_pred cccCHHHHcCC--CCEEECCCCCHH-HHHHHHHHcCCCEEEEECC-CCeEEEEEEHHHHHHHH
Confidence 35789999986 677899999998 9999999999999999984 47999999999998753
No 82
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.12 E-value=6.4e-06 Score=68.07 Aligned_cols=72 Identities=13% Similarity=0.172 Sum_probs=56.7
Q ss_pred CCCCHHHHHHHHHHhcCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhcc
Q 019997 86 GELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 164 (332)
Q Consensus 86 G~L~~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~ 164 (332)
|.++..+ ++.....-...+++++| + ++.++++++++. ++++.|.+++..++||+| +.|+++|+|+..|++..
T Consensus 71 Givt~~d--l~~~~~~~~~~~v~~~m-~--~~~~v~~~~~l~-~~~~~m~~~~~~~l~Vvd-~~g~~~Giit~~dil~~ 142 (148)
T 3lv9_A 71 GFVHIRD--LYNQKINENKIELEEIL-R--DIIYISENLTID-KALERIRKEKLQLAIVVD-EYGGTSGVVTIEDILEE 142 (148)
T ss_dssp EEEEHHH--HHHHHHHHSCCCGGGTC-B--CCEEEETTSBHH-HHHHHHHHHTCSEEEEEC-TTSSEEEEEEHHHHHHH
T ss_pred EEEEHHH--HHHHHhcCCCccHHHhc-C--CCeEECCCCCHH-HHHHHHHhcCCeEEEEEe-CCCCEEEEEEHHHHHHH
Confidence 5555443 33332222278899999 3 568899999998 999999999999999998 45799999999999864
No 83
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.11 E-value=5.9e-06 Score=59.66 Aligned_cols=30 Identities=13% Similarity=0.124 Sum_probs=28.1
Q ss_pred CCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 179 RIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 179 ~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
++.++++++++.+|++.|.+++.+.+||+|
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d 30 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVME 30 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEE
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEE
Confidence 357899999999999999999999999999
No 84
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.11 E-value=5.9e-06 Score=68.47 Aligned_cols=39 Identities=21% Similarity=0.284 Sum_probs=36.8
Q ss_pred ccccccccc--CCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 170 VPVKSVTIR--RIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 170 ~~V~dim~r--~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
.+++++|.+ +++++++++++.+|++.|.+++.+.+||+|
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd 68 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICD 68 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEEC
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEEC
Confidence 379999888 899999999999999999999999999999
No 85
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=98.10 E-value=7.9e-06 Score=70.32 Aligned_cols=61 Identities=15% Similarity=0.254 Sum_probs=53.9
Q ss_pred CcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCC
Q 019997 102 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP 166 (332)
Q Consensus 102 l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~ 166 (332)
....+++++|++ ++.++++++++. ++++.|.+++.+++||+|+ .|+++|+|+.+|++....
T Consensus 72 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~-~g~~~Givt~~dll~~~~ 132 (184)
T 1pvm_A 72 PDEVPIRLVMRK--PIPKVKSDYDVK-DVAAYLSENGLERCAVVDD-PGRVVGIVTLTDLSRYLS 132 (184)
T ss_dssp GGGSBGGGTSBS--SCCEEETTCBHH-HHHHHHHHHTCSEEEEECT-TCCEEEEEEHHHHTTTSC
T ss_pred cccCCHHHHhCC--CCcEECCCCCHH-HHHHHHHHcCCcEEEEEcC-CCeEEEEEEHHHHHHHHH
Confidence 467789999986 678899999998 9999999999999999984 479999999999997643
No 86
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.10 E-value=5.6e-06 Score=69.07 Aligned_cols=73 Identities=18% Similarity=0.122 Sum_probs=57.3
Q ss_pred CCCCHHHHHHHHHHhcCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccC
Q 019997 86 GELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 165 (332)
Q Consensus 86 G~L~~eE~~~I~~vl~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~ 165 (332)
|.++..+ ++.....-...+++++| + ++.++++++++. ++++.|.+++..++||++ +.|+++|+|+.+|++...
T Consensus 69 Givt~~d--l~~~~~~~~~~~v~~~m-~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd-~~g~~vGivt~~dil~~l 141 (153)
T 3oco_A 69 GYAYNYD--IVRQARIDDKAKISTIM-R--DIVSVPENMKVP-DVMEEMSAHRVPMAIVID-EYGGTSGIITDKDVYEEL 141 (153)
T ss_dssp EEEEHHH--HHHHHHHHTTSBGGGTC-B--CCEEEETTSBHH-HHHHHHHHTTCSCEEEEC-TTSCEEEEECHHHHHHHH
T ss_pred EEEEHHH--HHhHHhcCCCCcHHHHh-C--CCeEECCCCCHH-HHHHHHHHcCCcEEEEEe-CCCCEEEEeeHHHHHHHH
Confidence 4454433 33333322378899999 4 678999999998 999999999999999998 457999999999998753
No 87
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.10 E-value=4.9e-06 Score=68.14 Aligned_cols=59 Identities=14% Similarity=0.178 Sum_probs=52.1
Q ss_pred CcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccC
Q 019997 102 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 165 (332)
Q Consensus 102 l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~ 165 (332)
....+++++|++ +.++++++++. ++++.|.+++..++||+| +.|+++|+|+.+|++...
T Consensus 67 ~~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd-~~g~lvGiit~~Dil~~l 125 (136)
T 3lfr_A 67 GDSDDVKKLLRP---ATFVPESKRLN-VLLREFRANHNHMAIVID-EYGGVAGLVTIEDVLEQI 125 (136)
T ss_dssp GGGCCGGGTCBC---CCEEETTCBHH-HHHHHHHHHTCCEEEEEC-TTSCEEEEEEHHHHHTTC
T ss_pred CCCcCHHHHcCC---CeEECCCCcHH-HHHHHHHhcCCeEEEEEe-CCCCEEEEEEHHHHHHHH
Confidence 356789999974 67899999998 999999999999999998 457999999999999754
No 88
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=98.09 E-value=5.8e-06 Score=69.83 Aligned_cols=61 Identities=21% Similarity=0.305 Sum_probs=54.3
Q ss_pred cCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCC
Q 019997 101 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP 166 (332)
Q Consensus 101 ~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~ 166 (332)
.....+|+++|++ ++.++++++++. ++++.|.+++++++||+++ |+++|+|+.+|++.+..
T Consensus 89 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~--g~~~Giit~~dil~~~~ 149 (165)
T 3fhm_A 89 ASLQQSVSVAMTK--NVVRCQHNSTTD-QLMEIMTGGRFRHVPVEEN--GRLAGIISIGDVVKARI 149 (165)
T ss_dssp GGGTSBGGGTSBS--SCCCBCTTCBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHTT
T ss_pred ccccCCHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHH
Confidence 4567899999985 678899999998 9999999999999999984 79999999999998643
No 89
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.09 E-value=3.3e-06 Score=68.13 Aligned_cols=40 Identities=10% Similarity=0.007 Sum_probs=38.1
Q ss_pred ccccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 169 EVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 169 ~~~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
+.+++++|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 4 s~~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd 43 (128)
T 3gby_A 4 SVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLD 43 (128)
T ss_dssp TCBGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEE
T ss_pred ceEHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEE
Confidence 4679999999999999999999999999999999999999
No 90
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.09 E-value=1.2e-05 Score=65.84 Aligned_cols=57 Identities=11% Similarity=0.152 Sum_probs=51.1
Q ss_pred cccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhcc
Q 019997 103 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 164 (332)
Q Consensus 103 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~ 164 (332)
.+.+++++|++ ++.+++++ ++. ++++.|.+++.+++||++ +.|+++|+|+.+|+++.
T Consensus 69 ~~~~v~~~m~~--~~~~v~~~-~l~-~a~~~m~~~~~~~l~Vvd-~~g~~~Giit~~dll~~ 125 (141)
T 2rih_A 69 LDGPAMPIANS--PITVLDTD-PVH-VAAEKMRRHNIRHVVVVN-KNGELVGVLSIRDLCFE 125 (141)
T ss_dssp TTSBSGGGCBC--CCEEETTS-BHH-HHHHHHHHHTCSEEEEEC-TTSCEEEEEEHHHHHSC
T ss_pred CCCCHHHHcCC--CCeEEcCC-CHH-HHHHHHHHcCCeEEEEEc-CCCcEEEEEEHHHHHHH
Confidence 36789999986 67899999 998 999999999999999998 45799999999999874
No 91
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=98.08 E-value=2.6e-06 Score=69.86 Aligned_cols=60 Identities=23% Similarity=0.432 Sum_probs=52.0
Q ss_pred CcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccC
Q 019997 102 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 165 (332)
Q Consensus 102 l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~ 165 (332)
....+++++|++ ++.++++++++. ++++.|.+++++++||++ +.|+++|+|+.+|++...
T Consensus 82 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~~~~~~~~~l~Vvd-~~g~~~Giit~~dil~~~ 141 (152)
T 4gqw_A 82 TNGKLVGDLMTP--APLVVEEKTNLE-DAAKILLETKYRRLPVVD-SDGKLVGIITRGNVVRAA 141 (152)
T ss_dssp --CCBHHHHSEE--SCCCEESSSBHH-HHHHHHHHSSCCEEEEEC-TTSBEEEEEEHHHHHHHH
T ss_pred hccccHHHhcCC--CceEECCCCcHH-HHHHHHHHCCCCEEEEEC-CCCcEEEEEEHHHHHHHH
Confidence 456789999997 567899999998 999999999999999998 457999999999998753
No 92
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=98.07 E-value=7.7e-06 Score=66.44 Aligned_cols=39 Identities=15% Similarity=0.164 Sum_probs=37.0
Q ss_pred cccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 170 VPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 170 ~~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
.+++++|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 7 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd 45 (138)
T 2yzi_A 7 APIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVIN 45 (138)
T ss_dssp SBGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred hhHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEc
Confidence 578999989999999999999999999999999999999
No 93
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=98.07 E-value=3.9e-06 Score=67.76 Aligned_cols=59 Identities=24% Similarity=0.410 Sum_probs=52.7
Q ss_pred CcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccC
Q 019997 102 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 165 (332)
Q Consensus 102 l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~ 165 (332)
....+++++|++ ++.++++++++. ++++.|.+++.+++||+++ |+++|+|+.+|++...
T Consensus 71 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~l~Vvd~--g~~~Giit~~dil~~l 129 (133)
T 1y5h_A 71 PNTATAGELARD--SIYYVDANASIQ-EMLNVMEEHQVRRVPVISE--HRLVGIVTEADIARHL 129 (133)
T ss_dssp TTTSBHHHHHTT--CCCCEETTCCHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHTC
T ss_pred ccccCHHHHhcC--CCEEECCCCCHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHH
Confidence 356789999986 677899999998 9999999999999999984 7999999999998754
No 94
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.06 E-value=5.6e-06 Score=67.04 Aligned_cols=57 Identities=18% Similarity=0.191 Sum_probs=50.2
Q ss_pred cccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhcc
Q 019997 103 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 164 (332)
Q Consensus 103 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~ 164 (332)
...+++++|++ +.++++++++. ++++.|.+++..++||+| +.|+++|+|+.+|++..
T Consensus 67 ~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~pVvd-~~g~~~Giit~~Dil~~ 123 (129)
T 3jtf_A 67 PALDIRSLVRP---AVFIPEVKRLN-VLLREFRASRNHLAIVID-EHGGISGLVTMEDVLEQ 123 (129)
T ss_dssp TTSCGGGGCBC---CCEEETTCBHH-HHHHHHHTSSCCEEEEEC-C-CCEEEEEEHHHHHHH
T ss_pred CCcCHHHHhCC---CeEeCCCCcHH-HHHHHHHhcCCeEEEEEe-CCCCEEEEEEHHHHHHH
Confidence 56789999974 57899999998 999999999999999998 45799999999999864
No 95
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.04 E-value=7.9e-06 Score=68.74 Aligned_cols=39 Identities=13% Similarity=0.102 Sum_probs=36.9
Q ss_pred cccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 170 VPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 170 ~~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
.+++++|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 5 ~~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd 43 (160)
T 2o16_A 5 IKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVD 43 (160)
T ss_dssp CBGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred CcHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEc
Confidence 568999988999999999999999999999999999999
No 96
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=98.04 E-value=4.8e-06 Score=70.50 Aligned_cols=60 Identities=25% Similarity=0.429 Sum_probs=53.4
Q ss_pred cCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhcc
Q 019997 101 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 164 (332)
Q Consensus 101 ~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~ 164 (332)
.....+|+++|++ ++.++++++++. ++++.|.+++++++||++ +.|+++|+|+.+|+++.
T Consensus 94 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd-~~g~~vGiit~~dil~~ 153 (180)
T 3sl7_A 94 KTYGKVVGDLMTP--SPLVVRDSTNLE-DAARLLLETKFRRLPVVD-ADGKLIGILTRGNVVRA 153 (180)
T ss_dssp TTTTCBHHHHSEE--SCCCEETTSBHH-HHHHHHTTSTTCEEEEEC-TTCBEEEEEEHHHHHHH
T ss_pred ccccccHHHHhCC--CceEeCCCCcHH-HHHHHHHHcCCCEEEEEC-CCCeEEEEEEHHHHHHH
Confidence 4567889999996 567899999998 999999999999999998 45799999999999875
No 97
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=98.03 E-value=7.8e-06 Score=68.05 Aligned_cols=39 Identities=8% Similarity=-0.078 Sum_probs=36.4
Q ss_pred cccccccc--cCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 170 VPVKSVTI--RRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 170 ~~V~dim~--r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
.+++++|. ++++++++++++.+|++.|.+++.+.+||+|
T Consensus 15 ~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd 55 (156)
T 3ctu_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVT 55 (156)
T ss_dssp TTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEEC
T ss_pred HHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEEC
Confidence 46889987 7899999999999999999999999999999
No 98
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=98.02 E-value=8.2e-06 Score=66.36 Aligned_cols=61 Identities=16% Similarity=0.248 Sum_probs=51.3
Q ss_pred CcccccccccccCc----ceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhcc
Q 019997 102 LTEKTASDAMTPIA----ETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 164 (332)
Q Consensus 102 l~~~tV~dIMtPr~----~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~ 164 (332)
....+++++|++.. ++.++++++++. ++++.|.+++.+++||+++ .|+++|+|+.+|++..
T Consensus 74 ~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~~~~~m~~~~~~~l~Vvd~-~g~~~Giit~~dil~~ 138 (144)
T 2nyc_A 74 DLSLSVGEALMRRSDDFEGVYTCTKNDKLS-TIMDNIRKARVHRFFVVDD-VGRLVGVLTLSDILKY 138 (144)
T ss_dssp -CCSBHHHHHHHCC------CEECTTSBHH-HHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHHH
T ss_pred cCCccHHHHHhcCccccCCCeEECCCCcHH-HHHHHHHHCCCCEEEEECC-CCCEEEEEEHHHHHHH
Confidence 34678999998642 578999999998 9999999999999999984 4799999999999864
No 99
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=98.01 E-value=1.1e-05 Score=65.39 Aligned_cols=39 Identities=15% Similarity=0.152 Sum_probs=36.9
Q ss_pred cccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 170 VPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 170 ~~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
.+++++|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 8 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd 46 (138)
T 2p9m_A 8 IKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVID 46 (138)
T ss_dssp CBGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEEC
T ss_pred CCHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEEC
Confidence 578999888999999999999999999999999999999
No 100
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.01 E-value=7.3e-06 Score=68.54 Aligned_cols=60 Identities=23% Similarity=0.381 Sum_probs=52.7
Q ss_pred cCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccC
Q 019997 101 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 165 (332)
Q Consensus 101 ~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~ 165 (332)
.....+++++|++ +.++++++++. ++++.|.+++++++||+| +.|+++|+|+.+|++...
T Consensus 92 ~~~~~~v~~im~~---~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd-~~g~~vGiit~~dll~~l 151 (157)
T 1o50_A 92 RLIAKNASEIMLD---PVYVHMDTPLE-EALKLMIDNNIQEMPVVD-EKGEIVGDLNSLEILLAL 151 (157)
T ss_dssp CCSSCBHHHHCBC---CCCBCTTSBHH-HHHHHHHHHTCSEEEEEC-TTSCEEEEEEHHHHHHHH
T ss_pred HHcCCcHHHHcCC---CeEECCCCCHH-HHHHHHHHCCCcEEEEEc-CCCEEEEEEEHHHHHHHH
Confidence 3467889999986 67899999998 999999999999999998 347999999999998753
No 101
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.00 E-value=1.2e-05 Score=65.12 Aligned_cols=57 Identities=16% Similarity=0.261 Sum_probs=50.5
Q ss_pred cccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhcc
Q 019997 103 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 164 (332)
Q Consensus 103 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~ 164 (332)
...+++++|++ +.++++++++. ++++.|.+++..++||+| +.|+++|+|+..|+++.
T Consensus 70 ~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd-~~g~~vGivt~~dil~~ 126 (130)
T 3i8n_A 70 GQKQLGAVMRP---IQVVLNNTALP-KVFDQMMTHRLQLALVVD-EYGTVLGLVTLEDIFEH 126 (130)
T ss_dssp TTSBHHHHSEE---CCEEETTSCHH-HHHHHHHHHTCCEEEEEC-TTSCEEEEEEHHHHHHH
T ss_pred CcCCHHHHhcC---CcCcCCCCcHH-HHHHHHHHcCCeEEEEEc-CCCCEEEEEEHHHHHHH
Confidence 46789999963 57899999998 999999999999999998 45799999999999864
No 102
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=98.00 E-value=1.4e-05 Score=66.32 Aligned_cols=60 Identities=15% Similarity=0.282 Sum_probs=51.8
Q ss_pred cccccccccccC----cceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhcc
Q 019997 103 TEKTASDAMTPI----AETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 164 (332)
Q Consensus 103 ~~~tV~dIMtPr----~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~ 164 (332)
.+.+++++|.++ .++.++++++++. ++++.|.+++.+++||+|+ .|+++|+|+.+|++..
T Consensus 85 ~~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~-~g~~vGiit~~dil~~ 148 (152)
T 2uv4_A 85 LDVSVTKALQHRSHYFEGVLKCYLHETLE-TIINRLVEAEVHRLVVVDE-NDVVKGIVSLSDILQA 148 (152)
T ss_dssp TTSBGGGGGGTCCHHHHTCSEECTTSBHH-HHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHHH
T ss_pred hcchHHHHHhhhhcccCCCeEECCCCcHH-HHHHHHHHcCCeEEEEECC-CCeEEEEEEHHHHHHH
Confidence 356799999743 3678899999998 9999999999999999984 4799999999999864
No 103
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=97.99 E-value=7.5e-06 Score=65.99 Aligned_cols=58 Identities=10% Similarity=0.202 Sum_probs=51.0
Q ss_pred cccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccC
Q 019997 103 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 165 (332)
Q Consensus 103 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~ 165 (332)
...+++++|++ +.++++++++. ++++.|.+++..++||+| +.|+++|+|+.+|+++..
T Consensus 67 ~~~~v~~~m~~---~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd-~~g~~~Giit~~dll~~l 124 (127)
T 3nqr_A 67 EAFSMDKVLRT---AVVVPESKRVD-RMLKEFRSQRYHMAIVID-EFGGVSGLVTIEDILELI 124 (127)
T ss_dssp CCCCHHHHCBC---CCEEETTCBHH-HHHHHHHHTTCCEEEEEC-TTSCEEEEEEHHHHHHHC
T ss_pred CCCCHHHHcCC---CeEECCCCcHH-HHHHHHHhcCCeEEEEEe-CCCCEEEEEEHHHHHHHH
Confidence 56789999964 46899999998 999999999999999998 457999999999998753
No 104
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=97.97 E-value=1.2e-05 Score=66.27 Aligned_cols=58 Identities=10% Similarity=0.256 Sum_probs=50.6
Q ss_pred CcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccC
Q 019997 102 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 165 (332)
Q Consensus 102 l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~ 165 (332)
....+|+++|++ ++.++++++++. ++++.|.++++ +||++ +.|+++|+|+.+|++...
T Consensus 84 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~~~~~~~--l~Vvd-~~g~~~Giit~~dil~~l 141 (150)
T 3lqn_A 84 LEEMKVEQVMKQ--DIPVLKLEDSFA-KALEMTIDHPF--ICAVN-EDGYFEGILTRRAILKLL 141 (150)
T ss_dssp GGGCBGGGTCBS--SCCEEETTCBHH-HHHHHHHHCSE--EEEEC-TTCBEEEEEEHHHHHHHH
T ss_pred HhcCCHHHHhcC--CCceeCCCCCHH-HHHHHHHhCCE--EEEEC-CCCcEEEEEEHHHHHHHH
Confidence 357889999986 678899999998 99999999887 99998 457999999999998753
No 105
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=97.96 E-value=1.1e-05 Score=65.70 Aligned_cols=57 Identities=19% Similarity=0.172 Sum_probs=49.7
Q ss_pred cccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhcc
Q 019997 103 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 164 (332)
Q Consensus 103 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~ 164 (332)
...+++++|. ++.++++++++. ++++.|.+++...+||+| +.|+++|+|+.+|++..
T Consensus 68 ~~~~v~~~m~---~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd-~~g~lvGiit~~Dil~~ 124 (130)
T 3hf7_A 68 TKEIMLRAAD---EIYFVPEGTPLS-TQLVKFQRNKKKVGLVVD-EYGDIQGLVTVEDILEE 124 (130)
T ss_dssp CHHHHHHHSB---CCCEEETTCBHH-HHHHHHHHHCCCEEEEEC-TTSCEEEEEEHHHHHHH
T ss_pred chhhHHHhcc---CCeEeCCCCcHH-HHHHHHHhcCCeEEEEEc-CCCCEEEEeeHHHHHHH
Confidence 3457899994 467899999998 999999999999999998 45799999999999874
No 106
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=97.95 E-value=9.6e-06 Score=72.00 Aligned_cols=60 Identities=13% Similarity=0.210 Sum_probs=53.3
Q ss_pred CcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccC
Q 019997 102 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 165 (332)
Q Consensus 102 l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~ 165 (332)
..+.+|+++|++ +++++++++++. ++++.|.++++..+||+| +.|+++|+|+..|++...
T Consensus 113 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVVD-~~g~lvGiIT~~Dil~~i 172 (205)
T 3kxr_A 113 EPHEPLISLLSE--DSRALTANTTLL-DAAEAIEHSREIELPVID-DAGELIGRVTLRAATALV 172 (205)
T ss_dssp CTTSBGGGGCCS--SCCCEETTSCHH-HHHHHHHTSSCSEEEEEC-TTSBEEEEEEHHHHHHHH
T ss_pred CCcchHHHHhcC--CCeEECCCCCHH-HHHHHHHhcCCCEEEEEc-CCCeEEEEEEHHHHHHHH
Confidence 457789999986 678899999998 999999999999999998 457999999999998754
No 107
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=97.95 E-value=1.4e-05 Score=66.64 Aligned_cols=40 Identities=18% Similarity=0.205 Sum_probs=37.6
Q ss_pred ccccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 169 EVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 169 ~~~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
..+++++|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 12 ~~~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd 51 (164)
T 2pfi_A 12 HVRVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVE 51 (164)
T ss_dssp SCBHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEES
T ss_pred CCCHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEe
Confidence 4678999999999999999999999999999999999998
No 108
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=97.93 E-value=1.2e-05 Score=68.03 Aligned_cols=38 Identities=8% Similarity=-0.051 Sum_probs=34.6
Q ss_pred ccccccc--cCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 171 PVKSVTI--RRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 171 ~V~dim~--r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
.+.++|+ .++.+|++++++.+|++.|.+++.+.+||+|
T Consensus 16 ~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd 55 (156)
T 3k6e_A 16 QEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVT 55 (156)
T ss_dssp TGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEEC
T ss_pred cHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEc
Confidence 4678875 5789999999999999999999999999999
No 109
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=97.93 E-value=1.6e-05 Score=73.18 Aligned_cols=40 Identities=13% Similarity=0.270 Sum_probs=38.1
Q ss_pred ccccccccccCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 169 EVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 169 ~~~V~dim~r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
...++++|.+++.+|.+++++.+|.+.|.+++.+.+||||
T Consensus 12 ~~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd 51 (250)
T 2d4z_A 12 NIQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVD 51 (250)
T ss_dssp SCBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEES
T ss_pred CCChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEe
Confidence 4579999999999999999999999999999999999999
No 110
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=97.92 E-value=1.1e-05 Score=67.55 Aligned_cols=55 Identities=15% Similarity=0.198 Sum_probs=49.5
Q ss_pred cccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHh
Q 019997 103 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLL 162 (332)
Q Consensus 103 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl 162 (332)
...+++++|++ +.++++++++. ++++.|.+++..++||+| +.|+++|+|+.+|++
T Consensus 101 ~~~~v~~im~~---~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd-~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 101 EQFHLKSILRP---AVFVPEGKSLT-ALLKEFREQRNHMAIVID-EYGGTSGLVTFEDII 155 (156)
T ss_dssp GGCCHHHHCBC---CCEEETTSBHH-HHHHHHHHTTCCEEEEEC-TTSSEEEEEEHHHHC
T ss_pred CcccHHHHcCC---CEEECCCCCHH-HHHHHHHhcCCeEEEEEC-CCCCEEEEEEHHHhc
Confidence 56789999975 67899999998 999999999999999998 457999999999986
No 111
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=97.89 E-value=1.7e-05 Score=65.72 Aligned_cols=40 Identities=20% Similarity=0.140 Sum_probs=36.7
Q ss_pred cccccccccc--CCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 169 EVPVKSVTIR--RIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 169 ~~~V~dim~r--~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
..+++++|.+ +++++++++++.+|++.|.+++.+.+||+|
T Consensus 10 ~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd 51 (157)
T 2emq_A 10 QMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLD 51 (157)
T ss_dssp CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEEC
T ss_pred hCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEc
Confidence 3578899875 899999999999999999999999999999
No 112
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=97.87 E-value=1.7e-05 Score=66.33 Aligned_cols=39 Identities=18% Similarity=0.102 Sum_probs=36.5
Q ss_pred ccccccccc--CCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 170 VPVKSVTIR--RIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 170 ~~V~dim~r--~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
.+++++|.+ +++++++++++.+|++.|.+++.+.+||+|
T Consensus 14 ~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd 54 (159)
T 1yav_A 14 ATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLD 54 (159)
T ss_dssp CBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEEC
T ss_pred hhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEEC
Confidence 578899877 899999999999999999999999999999
No 113
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=97.86 E-value=1.7e-05 Score=67.47 Aligned_cols=58 Identities=12% Similarity=0.208 Sum_probs=52.1
Q ss_pred CcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhcc
Q 019997 102 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 164 (332)
Q Consensus 102 l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~ 164 (332)
....+++++|++ ++.++++++++. ++++.|.+++.+++||++ .|+++|+|+.+|+++.
T Consensus 105 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~l~Vvd--~g~~vGiit~~dll~~ 162 (185)
T 2j9l_A 105 PPTLKLRNILDL--SPFTVTDLTPME-IVVDIFRKLGLRQCLVTH--NGRLLGIITKKDVLKH 162 (185)
T ss_dssp CCCEECGGGEES--SCCEEETTSBHH-HHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHH
T ss_pred ccCccHHHhhCc--CCeEeCCCCCHH-HHHHHHHhCCCcEEEEEE--CCEEEEEEEHHHHHHH
Confidence 456789999986 678899999998 999999999999999998 4799999999999874
No 114
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.82 E-value=1e-05 Score=81.62 Aligned_cols=100 Identities=17% Similarity=0.210 Sum_probs=20.2
Q ss_pred cccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCCcccccccccccc--CC
Q 019997 103 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIR--RI 180 (332)
Q Consensus 103 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~~~~~~V~dim~r--~v 180 (332)
.+.+|+++|++..+++++++++++. ++++.|.+++.+.+||+|+ .++++|+|+.+|++....... ...+.+.+ ..
T Consensus 159 ~~~~V~diM~~~~~~~tv~~~~sl~-ea~~~m~~~~i~~lpVVDe-~g~lvGiIT~~Dil~~~~~~~-~~~d~~~~l~v~ 235 (503)
T 1me8_A 159 TETKVSDMMTPFSKLVTAHQDTKLS-EANKIIWEKKLNALPIIDD-DQHLRYIVFRKDYDRSQVCHN-ELVDSQKRYLVG 235 (503)
T ss_dssp -----------------------------------------------------------------CC-CCBCTTSCBCCE
T ss_pred ccCcHHHHhCCCCCCEEEcCCCcHH-HHHHHHHHcCCCEEEEEcC-CCeEEEEEEecHHHHhhhccc-chhccccccccc
Confidence 4567999999865589999999998 9999999999999999984 579999999999998543221 12222111 11
Q ss_pred ceeCCCCCHHHHHHHHHhCCCcEEEE
Q 019997 181 PRVPETLPLYEILNEFQKGHSHMAVV 206 (332)
Q Consensus 181 ~~V~e~~~l~eaL~~M~~~~~~~a~V 206 (332)
..++. ....+.++.|.+.+.+.+.|
T Consensus 236 a~v~~-~~~~e~~~~l~e~gv~~l~V 260 (503)
T 1me8_A 236 AGINT-RDFRERVPALVEAGADVLCI 260 (503)
T ss_dssp EEECS-SSHHHHHHHHHHHTCSEEEE
T ss_pred cccCc-hhHHHHHHHHHhhhccceEE
Confidence 23455 66777789998888887544
No 115
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.80 E-value=6.3e-05 Score=76.04 Aligned_cols=107 Identities=16% Similarity=0.140 Sum_probs=80.4
Q ss_pred cCcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCCccccccccccccCC
Q 019997 101 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRI 180 (332)
Q Consensus 101 ~l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~~~~~~V~dim~r~v 180 (332)
.-.+.+++++|++ .++++++++.++. ++++.|.+++...+||+| +.|+++|+|+.+|++...... ..+.+.+.+-.
T Consensus 171 ~~~~~~V~~vM~~-~~~vtv~~~~~l~-eal~~m~~~~i~~lpVVD-e~g~l~GiIT~~Dil~~~~~p-~a~~D~~~rl~ 246 (511)
T 3usb_A 171 QDYSIKISDVMTK-EQLITAPVGTTLS-EAEKILQKYKIEKLPLVD-NNGVLQGLITIKDIEKVIEFP-NSAKDKQGRLL 246 (511)
T ss_dssp CCSSSBHHHHCCC-CCCCCEETTCCHH-HHHHHHHHHTCSEEEEEC-TTSBEEEEEEHHHHHHHHHCT-TCCBCTTSCBC
T ss_pred ccCCCcHHHhccc-CCCEEECCCCCHH-HHHHHHHHcCCCEEEEEe-CCCCEeeeccHHHHHHhhhcc-cchhhhcccee
Confidence 3356789999996 4678999999998 999999999999999998 457999999999999753221 22334433333
Q ss_pred c--eeCCCCCHHHHHHHHHhCCCcEEEEEEcCC
Q 019997 181 P--RVPETLPLYEILNEFQKGHSHMAVVVRQYN 211 (332)
Q Consensus 181 ~--~V~e~~~l~eaL~~M~~~~~~~a~VVDEyG 211 (332)
+ .+.......+.+..+.+.+...+.|....|
T Consensus 247 V~aavg~~~d~~era~aLveaGvd~I~Id~a~g 279 (511)
T 3usb_A 247 VGAAVGVTADAMTRIDALVKASVDAIVLDTAHG 279 (511)
T ss_dssp CEEEECSSTTHHHHHHHHHHTTCSEEEEECSCT
T ss_pred eeeeeeeccchHHHHHHHHhhccceEEeccccc
Confidence 2 355555667778888899998887765443
No 116
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=97.77 E-value=4.8e-05 Score=65.44 Aligned_cols=40 Identities=15% Similarity=0.130 Sum_probs=36.5
Q ss_pred ccccccccc--cCCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 169 EVPVKSVTI--RRIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 169 ~~~V~dim~--r~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
..+++++|. ++++++++++++.+|++.|.+++...+||+|
T Consensus 35 ~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd 76 (173)
T 3ocm_A 35 ERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCR 76 (173)
T ss_dssp TSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEES
T ss_pred CCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEe
Confidence 467999985 4688999999999999999999999999998
No 117
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=97.73 E-value=3e-05 Score=71.54 Aligned_cols=61 Identities=16% Similarity=0.378 Sum_probs=53.4
Q ss_pred CcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCC
Q 019997 102 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP 166 (332)
Q Consensus 102 l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~ 166 (332)
..+.+++++|++ +++++++++++. ++++.|.+++...+||+|+ .|+++|+|+..|++....
T Consensus 196 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~-~g~lvGivT~~Dil~~i~ 256 (278)
T 2yvy_A 196 DPRTRVAEIMNP--KVVYVRTDTDQE-EVARLMADYDFTVLPVVDE-EGRLVGIVTVDDVLDVLE 256 (278)
T ss_dssp CTTCBSTTTSBS--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHHHC-
T ss_pred CCCCcHHHHhCC--CCeEEeCCCCHH-HHHHHHHhcCCCEEEEEeC-CCeEEEEEEHHHHHHHHH
Confidence 357789999986 678899999998 9999999999999999984 579999999999997543
No 118
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=97.65 E-value=3.9e-05 Score=71.40 Aligned_cols=60 Identities=12% Similarity=0.308 Sum_probs=53.1
Q ss_pred CcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccC
Q 019997 102 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 165 (332)
Q Consensus 102 l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~ 165 (332)
..+.+|+++|++ +++++++++++. ++++.|.+++++++||+| +.|+++|+|+..|++...
T Consensus 198 ~~~~~v~~im~~--~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVd-~~g~lvGiIT~~Dil~~i 257 (286)
T 2oux_A 198 DDDTLIADILNE--RVISVHVGDDQE-DVAQTIRDYDFLAVPVTD-YDDHLLGIVTVDDIIDVI 257 (286)
T ss_dssp CTTSBHHHHSBS--CCCCEETTSBHH-HHHHHHHHHTCSEEEEEC-TTCBEEEEEEHHHHHHHH
T ss_pred CCCCcHHHHcCC--CCeeecCCCCHH-HHHHHHHHcCCcEEEEEc-CCCeEEEEEEHHHHHHHH
Confidence 357789999986 678899999998 999999999999999998 457999999999998753
No 119
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=97.46 E-value=0.00013 Score=73.60 Aligned_cols=39 Identities=13% Similarity=0.182 Sum_probs=37.4
Q ss_pred cccccccccCCceeCCC-CCHHHHHHHHHhCCCcEEEEEE
Q 019997 170 VPVKSVTIRRIPRVPET-LPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 170 ~~V~dim~r~v~~V~e~-~~l~eaL~~M~~~~~~~a~VVD 208 (332)
.+|+++|.+++++++++ +++.+|++.|.+++.+.+||+|
T Consensus 384 ~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd 423 (527)
T 3pc3_A 384 LAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVD 423 (527)
T ss_dssp SBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEEC
T ss_pred CcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEE
Confidence 57999999999999999 9999999999999999999998
No 120
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=97.40 E-value=0.00015 Score=72.49 Aligned_cols=60 Identities=17% Similarity=0.387 Sum_probs=53.5
Q ss_pred CcccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccC
Q 019997 102 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 165 (332)
Q Consensus 102 l~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~ 165 (332)
-.+.+++++|++ +++++++++++. ++++.|.+++...+||+| +.|+++|+|+.+|++...
T Consensus 216 ~~~~~v~dim~~--~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVD-e~g~lvGiIT~~Dil~~i 275 (473)
T 2zy9_A 216 DPRTRVAEIMNP--KVVYVRTDTDQE-EVARLMADYDFTVLPVVD-EEGRLVGIVTVDDVLDVL 275 (473)
T ss_dssp CTTSBGGGTSBS--SCCCEESSSBHH-HHHHHHHHHTCSEEEEEC-TTSBEEEEEEHHHHHHHH
T ss_pred CCCCcHHHHhCC--CCeEEeCCCcHH-HHHHHHHhcCCcEEEEEc-CCCEEEEEEehHhhHHHH
Confidence 367789999986 678899999998 999999999999999998 457999999999998753
No 121
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.36 E-value=0.00013 Score=73.28 Aligned_cols=99 Identities=15% Similarity=0.123 Sum_probs=14.5
Q ss_pred cccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCCcccccccccc--ccCC
Q 019997 103 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVT--IRRI 180 (332)
Q Consensus 103 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~~~~~~V~dim--~r~v 180 (332)
.+.+|+++|+|+.+++++++++++. ++++.|.+++...+||+| +.++++|+|+.+|+++...... ...+.- .+-.
T Consensus 145 ~~~~V~~vMtp~~~~vtv~~~~~l~-ea~~~m~~~~i~~lpVVD-e~g~lvGiIT~~Dil~~~~~p~-a~kd~~grl~v~ 221 (490)
T 4avf_A 145 AGDTVAAIMTPKDKLVTAREGTPLE-EMKAKLYENRIEKMLVVD-ENFYLRGLVTFRDIEKAKTYPL-ASKDEQGRLRVG 221 (490)
T ss_dssp ----------------------------------------------------------------CTT-CCBCTTSCBCCE
T ss_pred cCCcHHHHhccCCCCEEECCCCcHH-HHHHHHHHcCCCEEEEEc-CCCcEEEEEehHHhhhhccCcc-hhhhccCcceee
Confidence 4668999999755688999999998 999999999999999998 4579999999999998542211 011110 0111
Q ss_pred ceeCCCCCHHHHHHHHHhCCCcEE
Q 019997 181 PRVPETLPLYEILNEFQKGHSHMA 204 (332)
Q Consensus 181 ~~V~e~~~l~eaL~~M~~~~~~~a 204 (332)
..+.......+.++.+.+.+...+
T Consensus 222 aavG~~~~~~~~a~~l~~aG~d~I 245 (490)
T 4avf_A 222 AAVGTGADTGERVAALVAAGVDVV 245 (490)
T ss_dssp EEECSSTTHHHHHHHHHHTTCSEE
T ss_pred eeeccccchHHHHHHHhhcccceE
Confidence 124444445556666666666644
No 122
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=97.35 E-value=0.00016 Score=74.69 Aligned_cols=56 Identities=9% Similarity=0.019 Sum_probs=48.7
Q ss_pred ccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCC
Q 019997 106 TASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP 166 (332)
Q Consensus 106 tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~ 166 (332)
+++++|++ +++++++++++. ++++.|.+++.+++||++ +|+++|+|+.+|+++...
T Consensus 569 ~v~~iMt~--~pitV~~~~~l~-ea~~~M~~~~i~~lpVve--~G~lvGIVT~~Dll~~~~ 624 (632)
T 3org_A 569 SLVVPCDV--SPIVVTSYSLVR-QLHFLFVMLMPSMIYVTE--RGKLVGIVEREDVAYGYS 624 (632)
T ss_dssp --CCSCCC--CCCEEETTCBHH-HHHHHHHHTCCSEEEEEE--TTEEEEEEEGGGTEECCC
T ss_pred ccchhhcC--CCceecCCCcHH-HHHHHHHhcCCCEEEEEE--CCEEEEEEehhhHHHHHh
Confidence 48999997 667899999998 999999999999999994 369999999999998654
No 123
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=97.13 E-value=0.00025 Score=70.90 Aligned_cols=100 Identities=16% Similarity=0.292 Sum_probs=22.6
Q ss_pred cccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCCccccccccccccCC-c
Q 019997 103 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRI-P 181 (332)
Q Consensus 103 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~~~~~~V~dim~r~v-~ 181 (332)
.+.+++++|+++.++.++++++++. ++++.|.+++..++||+|+ .++++|+|+.+|+++..... ...++. .... .
T Consensus 153 ~~~~v~~im~~~~~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVd~-~g~lvGiIt~~Dll~~~~~~-~~~~D~-~~~l~v 228 (494)
T 1vrd_A 153 LSKKIKDLMTPREKLIVAPPDISLE-KAKEILHQHRIEKLPLVSK-DNKLVGLITIKDIMSVIEHP-NAARDE-KGRLLV 228 (494)
T ss_dssp ----------------------------------------------------------CHHHHTCT-TCCBCT-TSCBCC
T ss_pred CCCcHHHHhCCCCCCeEECCCCCHH-HHHHHHHHcCCcEEEEEcC-CCeEEEEEEHHHHHhhhccc-cccccc-hhhhcc
Confidence 4568999999755788999999998 9999999999999999984 57999999999998753321 111121 0111 1
Q ss_pred --eeCCCCCHHHHHHHHHhCCCcEEEE
Q 019997 182 --RVPETLPLYEILNEFQKGHSHMAVV 206 (332)
Q Consensus 182 --~V~e~~~l~eaL~~M~~~~~~~a~V 206 (332)
-+.......+.+..+.+.+...+.+
T Consensus 229 ga~ig~~~~~~~~a~~l~~aGvd~v~i 255 (494)
T 1vrd_A 229 GAAVGTSPETMERVEKLVKAGVDVIVI 255 (494)
T ss_dssp EEEECSSTTHHHHHHHHHHTTCSEEEE
T ss_pred ccccCcCHhHHHHHHHHHHhCCCEEEE
Confidence 2344456677888888888777655
No 124
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=97.11 E-value=0.0002 Score=72.03 Aligned_cols=61 Identities=16% Similarity=0.210 Sum_probs=43.5
Q ss_pred cccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccC
Q 019997 103 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 165 (332)
Q Consensus 103 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~ 165 (332)
.+.+++++|+|+.++++++++.++. ++++.|.+++...+||+| +.|+++|+|+.+|+++..
T Consensus 147 ~~~~v~diM~p~~~~vtv~~~~~l~-ea~~~m~~~~i~~lpVVD-e~G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 147 LTKSVAAVMTPKERLATVKEGATGA-EVQEKMHKARVEKILVVN-DEFQLKGMITAKDFHKAE 207 (496)
T ss_dssp TTSBGGGTSEEGGGCCEEECC-----CGGGTCC---CCCEEEEC-TTSBCCEEECCC-----C
T ss_pred CCCcHHHHhcCCCCCEEECCCCCHH-HHHHHHHHcCCCEEEEEc-CCCCEEEeehHhHHHHhh
Confidence 5678999999765688999999998 999999999999999998 457999999999999754
No 125
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=97.08 E-value=0.00014 Score=73.51 Aligned_cols=99 Identities=15% Similarity=0.151 Sum_probs=18.6
Q ss_pred cccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCCcccc-cc---cccccc
Q 019997 103 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEV-PV---KSVTIR 178 (332)
Q Consensus 103 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~~~~~-~V---~dim~r 178 (332)
.+.+|+++||+ ++++++.+.+++ ++.++|.+++...+||+| +.++++|+|+.+|+++....... .+ +.+ +
T Consensus 198 ~~~~V~evMT~--~lvt~~~~~~le-eA~~iL~~~kieklpVVd-~~g~LvGlIT~kDi~k~~~~p~A~k~d~~grL--~ 271 (556)
T 4af0_A 198 AETPIKSVMTT--EVVTGSSPITLE-KANSLLRETKKGKLPIVD-SNGHLVSLVARSDLLKNQNYPYASKVPESKQL--Y 271 (556)
T ss_dssp ----------------------------------------------------------------CTTCCBCTTTCCB--C
T ss_pred cceEhhhhccc--ceEEecCCCCHH-HHHHHHHHccccceeEEc-cCCcEEEEEEechhhhhhhCCcchhcchhhce--e
Confidence 35689999997 699999999998 999999999999999998 45799999999999874321110 00 111 1
Q ss_pred CCceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 179 RIPRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 179 ~v~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
--..|.-...-.+-+..+.+.++..+ |+|
T Consensus 272 VgAAVgv~~d~~eR~~aLv~AGvD~i-viD 300 (556)
T 4af0_A 272 CGAAIGTRPGDKDRLKLLAEAGLDVV-VLD 300 (556)
T ss_dssp CEEEECSSHHHHHHHHHHHHTTCCEE-EEC
T ss_pred eEEEeccCccHHHHHHHHHhcCCcEE-EEe
Confidence 11224434445677778888998876 455
No 126
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=97.01 E-value=0.00057 Score=68.36 Aligned_cols=98 Identities=20% Similarity=0.318 Sum_probs=17.8
Q ss_pred cccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCCccccccccccccCC--
Q 019997 103 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRI-- 180 (332)
Q Consensus 103 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~~~~~~V~dim~r~v-- 180 (332)
.+.+++++|++ +++++++++++. ++++.|.+++...+||+| +.++++|+|+.+|+++...... ...+.+.+-.
T Consensus 148 ~~~~v~~im~~--~~~~v~~~~~l~-eal~~m~~~~~~~lpVVd-e~g~lvGiiT~~Dil~~~~~~~-~~~~~~g~~~v~ 222 (486)
T 2cu0_A 148 EGKLVKELMTK--EVITVPESIEVE-EALKIMIENRIDRLPVVD-ERGKLVGLITMSDLVARKKYKN-AVRDENGELLVA 222 (486)
T ss_dssp ---------------------------------------------------------------CCTT-CCBCTTSCBCCE
T ss_pred CCCCHHHHccC--CCeEECCcCcHH-HHHHHHHHcCCCEEEEEe-cCCeEEEEEEHHHHHHhhhccc-cccccCCceeec
Confidence 45689999986 678999999998 999999999999999998 4579999999999998654211 1111111100
Q ss_pred ceeCCCCCHHHHHHHHHhCCCcEEEEEE
Q 019997 181 PRVPETLPLYEILNEFQKGHSHMAVVVR 208 (332)
Q Consensus 181 ~~V~e~~~l~eaL~~M~~~~~~~a~VVD 208 (332)
..++. .. .+.+..|...+...+ |+|
T Consensus 223 ~~~~~-~~-~~~a~~l~~~gvd~l-vvd 247 (486)
T 2cu0_A 223 AAVSP-FD-IKRAIELDKAGVDVI-VVD 247 (486)
T ss_dssp EEECT-TC-HHHHHHHHHTTCSEE-EEE
T ss_pred ceech-hh-HHHHHHHHHhcCCce-EEE
Confidence 12333 33 566778888888875 555
No 127
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=96.86 E-value=0.00045 Score=69.55 Aligned_cols=61 Identities=16% Similarity=0.272 Sum_probs=41.7
Q ss_pred cccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccC
Q 019997 103 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 165 (332)
Q Consensus 103 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~ 165 (332)
...+++++|++..++.++++++++. ++++.|.+++..++||+| +.++++|+|+.+|+++..
T Consensus 171 ~~~~v~~vm~~~~~~~tv~~~~~l~-ea~~~m~~~~~~~lpVVd-~~g~lvGiIt~~Dll~~~ 231 (514)
T 1jcn_A 171 HTTLLSEVMTPRIELVVAPAGVTLK-EANEILQRSKKGKLPIVN-DCDELVAIIARTDLKKNR 231 (514)
T ss_dssp ----------CCBCCCCEETTCCST-TTTTHHHHHTCSCCCEES-SSSCCC----CCCCSSCC
T ss_pred CCCCHHHHhCCCCCCeEECCCCCHH-HHHHHHHHcCCCcccEEC-CCCeEEEEEEHHHHHHHh
Confidence 4568999999755778899999998 999999999999999998 457999999999998754
No 128
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=96.85 E-value=0.0038 Score=62.18 Aligned_cols=100 Identities=16% Similarity=0.196 Sum_probs=68.1
Q ss_pred cccccccccccCcceEEEcCCCCHHHHHHHHHHHcCCcEEEEEecCCCcEEEEEEhhhHhccCCccccccccccccC--C
Q 019997 103 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRR--I 180 (332)
Q Consensus 103 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~SriPVvd~~~~~ivGIVt~rDLl~~~~~~~~~V~dim~r~--v 180 (332)
.+.+++++|++ .+++++++++++. ++++.|.+++..++||+| +.++++|+++.+|++....... ...+...+- .
T Consensus 150 ~~~~v~~im~~-~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVVd-~~g~lvGivt~~Dil~~~~~~~-~~~d~~~~~~vg 225 (491)
T 1zfj_A 150 YNAPISEHMTS-EHLVTAAVGTDLE-TAERILHEHRIEKLPLVD-NSGRLSGLITIKDIEKVIEFPH-AAKDEFGRLLVA 225 (491)
T ss_dssp SSSBTTTSCCC-SCCCCEETTCCHH-HHHHHHHHTTCSEEEEEC-TTSBEEEEEEHHHHHHHHHCTT-CCBCTTSCBCCE
T ss_pred CCCcHHHHcCC-CCCEEECCCCCHH-HHHHHHHHcCCCEEEEEc-CCCcEEEEEEHHHHHHHHhccc-cccCcCCcEEEE
Confidence 56789999985 2567899999998 999999999999999998 4579999999999987532210 011110000 0
Q ss_pred ceeCCCCCHHHHHHHHHhCCCcEEEE
Q 019997 181 PRVPETLPLYEILNEFQKGHSHMAVV 206 (332)
Q Consensus 181 ~~V~e~~~l~eaL~~M~~~~~~~a~V 206 (332)
..++......+.+..+.+.+...+.+
T Consensus 226 ~~i~~~~~~~~~a~~l~~~G~d~ivi 251 (491)
T 1zfj_A 226 AAVGVTSDTFERAEALFEAGADAIVI 251 (491)
T ss_dssp EEECSSTTHHHHHHHHHHHTCSEEEE
T ss_pred EeccCchhHHHHHHHHHHcCCCeEEE
Confidence 12333344455566666667766543
Done!