BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 019999
         (332 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9FKA5|Y5957_ARATH Uncharacterized protein At5g39570 OS=Arabidopsis thaliana
           GN=At5g39570 PE=1 SV=1
          Length = 381

 Score = 58.2 bits (139), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 74/154 (48%), Positives = 86/154 (55%), Gaps = 35/154 (22%)

Query: 58  QPQPAYGFQPGMGRPEPYGSGRPESEYASGYA--------KRPDSQEYGSGYGKRPESE- 108
           +P P YG + G GR       +PESEY SGY         +RP+ Q YGSGYG R E+E 
Sbjct: 105 RPNPGYGSESGYGR-------KPESEYGSGYGGQTEVEYGRRPE-QSYGSGYGGRTETES 156

Query: 109 EYGSGYGRKPDSEVHGSGYGRRPESG-ESGFGGRTESEYGGS-AYGRKPEYESG-----Y 161
           EYGSG G + + E     YGRRPESG  SG+GGR+ESEY    +YGR  E E G     Y
Sbjct: 157 EYGSGGGGRTEVE-----YGRRPESGLGSGYGGRSESEYERKPSYGRSEEQEEGYRKPSY 211

Query: 162 GQKPEYESGYGGKPGYESGYGSKPEFESGYGRKP 195
           G+  E E GY  KP     YG   E E GY RKP
Sbjct: 212 GRSEEQEEGY-RKP----SYGRSEEQEEGY-RKP 239



 Score = 32.7 bits (73), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 43/94 (45%), Positives = 53/94 (56%), Gaps = 10/94 (10%)

Query: 117 KPDSEVHGSGYGRRPESG---ESGFGGRTESEYGGSAYGRKPEYESGYGQKPE--YESGY 171
           +PDS   G   G RP  G   ESG+G + ESEYG S YG + E E  YG++PE  Y SGY
Sbjct: 92  RPDSGGGGHVQGERPNPGYGSESGYGRKPESEYG-SGYGGQTEVE--YGRRPEQSYGSGY 148

Query: 172 GGKPGYESGYGSKPEF--ESGYGRKPDMSPATGV 203
           GG+   ES YGS      E  YGR+P+    +G 
Sbjct: 149 GGRTETESEYGSGGGGRTEVEYGRRPESGLGSGY 182


>sp|A9KNW4|IF2_CLOPH Translation initiation factor IF-2 OS=Clostridium phytofermentans
           (strain ATCC 700394 / DSM 18823 / ISDg) GN=infB PE=3
           SV=1
          Length = 1131

 Score = 47.8 bits (112), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 79/148 (53%), Gaps = 20/148 (13%)

Query: 52  SYPGRPQPQPAYGFQP-GMGRPEPYGSGRPESEYASGYAKRPDSQEYGSGYGKRPESEEY 110
           SY  RPQ Q +YG +P G G    YG  RP+ + + G  +RP  Q     YG RP+ +  
Sbjct: 298 SYGDRPQGQGSYGDRPQGQG---SYGDRRPQGQGSYG-DRRPQGQ---GSYGDRPQGQ-- 348

Query: 111 GSGYGRKPDSEVHGSG-YGRRPESGESGFGGRTESEYGGSAYG-RKPEYESGYGQKPEYE 168
           GS   R+P     G G YG RP+ G+  +G R     G  +YG R+P+ +  YG +P+ +
Sbjct: 349 GSYGDRRP----QGQGSYGDRPQ-GQGNYGDRRPG--GQGSYGDRRPQGQGSYGDRPQGQ 401

Query: 169 SGYGGK-PGYESGYGSKPEFESGYGRKP 195
             +G + P  + GYG +P+ +  YG +P
Sbjct: 402 GNFGDRRPQGQGGYGGRPQGQGSYGGRP 429



 Score = 35.0 bits (79), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 70/150 (46%), Gaps = 23/150 (15%)

Query: 56  RPQPQPAYGFQPGMGRPEPYGSGRPESEYASGYAKRPDSQEYGSGYGKRPESEEYGSGYG 115
           RPQ Q +       G   PY   RP+ +   G  +RP  Q  G    +RP + +   G G
Sbjct: 199 RPQGQNS-------GDRRPYNGDRPQGQGNYG-DRRPQGQNSGD---RRPYNGDRPQGQG 247

Query: 116 RKPDSEVHGSG-YG-RRPESGES-----GFGGRTESEYGGSAYG-RKPEYESGYGQKPEY 167
              D    G G YG RRP SG+       +G R     G  +YG R+P+ +  YG +P+ 
Sbjct: 248 NYGDRRPQGQGSYGDRRPNSGDRPQGQGNYGDRRPQ--GQGSYGDRRPQGQGSYGDRPQG 305

Query: 168 ESGYGGKPGYESGYGS-KPEFESGYG-RKP 195
           +  YG +P  +  YG  +P+ +  YG R+P
Sbjct: 306 QGSYGDRPQGQGSYGDRRPQGQGSYGDRRP 335


>sp|Q27409|FP1_MYTGA Adhesive plaque matrix protein OS=Mytilus galloprovincialis GN=FP1
           PE=2 SV=1
          Length = 751

 Score = 39.7 bits (91), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 27/68 (39%)

Query: 148 GSAYGRKPEYESGYGQKPEYESGYGGKPGYESGYGSKPEFESGYGRKPDMSPATGVSMMI 207
            ++Y  KP Y S Y  KP Y   Y  KP Y   Y +KP + S Y  KP   P        
Sbjct: 276 PTSYRAKPSYPSTYKAKPSYPPTYKAKPSYPPTYKAKPTYPSTYKAKPSYPPTYKAKPSY 335

Query: 208 GPAMGVSP 215
            P     P
Sbjct: 336 PPTYKAKP 343



 Score = 38.1 bits (87), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 24/65 (36%)

Query: 151 YGRKPEYESGYGQKPEYESGYGGKPGYESGYGSKPEFESGYGRKPDMSPATGVSMMIGPA 210
           Y  KP Y S Y  KP Y   Y  KP Y   Y +KP +   Y  KP   P         P 
Sbjct: 489 YKAKPSYSSTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPT 548

Query: 211 MGVSP 215
               P
Sbjct: 549 YKAKP 553



 Score = 37.4 bits (85), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 24/65 (36%)

Query: 151 YGRKPEYESGYGQKPEYESGYGGKPGYESGYGSKPEFESGYGRKPDMSPATGVSMMIGPA 210
           Y  KP Y   Y  KP Y S Y  KP Y   Y +KP +   Y  KP   P         P 
Sbjct: 479 YKTKPSYPRTYKAKPSYSSTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPT 538

Query: 211 MGVSP 215
               P
Sbjct: 539 YKAKP 543



 Score = 37.4 bits (85), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 30/103 (29%), Gaps = 5/103 (4%)

Query: 151 YGRKPEYESGYGQKPEYESGYGGKPGYESGYGSKPEFESGYGRKPDMSPATGVSMMIGPA 210
           Y  KP Y   Y  KP Y   Y  KP Y   Y +KP +   Y  KP   P         P 
Sbjct: 589 YKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPT 648

Query: 211 MGVSPMNLA-----MGVNPIMSPGMAANRSMNLGMGVSQSMNP 248
               P   A         P   P   A  S         S  P
Sbjct: 649 YKAKPSYPATYPSTYKAKPSYPPTYKAKPSYPPTYKPKPSYPP 691



 Score = 37.0 bits (84), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 34/111 (30%), Gaps = 2/111 (1%)

Query: 141 RTESEYGGSAYGRKPEYESGYGQKPEYESGYGGKPGYESGYGSKPEFESGYGRKPDMSPA 200
           + +S Y  + Y  KP Y   Y  KP Y   Y  KP Y   Y +KP +   Y  KP   P 
Sbjct: 560 KAKSSYPPT-YKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPT 618

Query: 201 TGVSMMIGPAMGVSP-MNLAMGVNPIMSPGMAANRSMNLGMGVSQSMNPGM 250
                   P     P         P   P   A  S       +    P  
Sbjct: 619 YKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPATYPSTYKAKPSY 669



 Score = 36.2 bits (82), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 33/103 (32%), Gaps = 1/103 (0%)

Query: 151 YGRKPEYESGYGQKPEYESGYGGKPGYESGYGSKPEFESGYGRKPDMSPATGVSMMIGPA 210
           Y  KP Y S Y  KP Y   Y  KP Y   Y +KP +   Y  K    P+    +   P 
Sbjct: 309 YKAKPTYPSTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPSYKPKTTYPPSYKPKISYPPT 368

Query: 211 MGVSPMNLAM-GVNPIMSPGMAANRSMNLGMGVSQSMNPGMVA 252
               P    +    P   P   A  S         S  P   A
Sbjct: 369 YKAKPSYPPIYKAKPSYPPTYKAKPSYLPTYKAKPSYPPTYKA 411



 Score = 34.7 bits (78), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 37/111 (33%), Gaps = 2/111 (1%)

Query: 141 RTESEYGGSAYGRKPEYESGYGQKPEYESGYGGKPGYESGYGSKPEFESGYGRKPDMSPA 200
           +T++ Y  S Y  K  Y S Y  K  Y   Y  KP Y + Y +KP + S Y  KP   P 
Sbjct: 240 KTKASYPSS-YKPKKTYPSTYKPKISYPPTYKAKPSYPTSYRAKPSYPSTYKAKPSYPPT 298

Query: 201 TGVSMMIGPAMGVSPMNLA-MGVNPIMSPGMAANRSMNLGMGVSQSMNPGM 250
                   P     P   +     P   P   A  S         S  P  
Sbjct: 299 YKAKPSYPPTYKAKPTYPSTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPSY 349


>sp|Q25460|FP1_MYTED Adhesive plaque matrix protein (Fragment) OS=Mytilus edulis GN=FP1
           PE=1 SV=1
          Length = 875

 Score = 39.7 bits (91), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 36/108 (33%), Gaps = 6/108 (5%)

Query: 148 GSAYGRKPEYESGYGQKPEYESGYGGKPGYESGYGSKPEFESGYGRKPDMSPATGVSMMI 207
            S Y  KP Y   Y  KP Y   Y  KP Y   Y +KP + S Y  KP   P     +  
Sbjct: 598 PSTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPTYPSTYKAKPSYPPTYKPKISY 657

Query: 208 GPAMGVSP-MNLAMGVNPIMSPGMAANRSMNLGMGVSQSMNPGMVASR 254
            P     P         P   P   A  +       ++  NP    ++
Sbjct: 658 PPTYKAKPSYPPTYKAKPSYPPTYKAKPTYK-----AKPTNPSTYKAK 700



 Score = 37.7 bits (86), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 30/102 (29%), Gaps = 3/102 (2%)

Query: 151 YGRKPEYESGYGQKPEYESGYGGKPGYESGYGSKPEFESGYGRKPDMSPATGVSMMIGPA 210
           Y  KP Y   Y  KP Y   Y  KP Y   Y +KP +   Y  KP   P         P 
Sbjct: 281 YKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPT 340

Query: 211 MGVSPMNLAMGVNPIMSPGMAANRSMNLGMGVSQSMNPGMVA 252
               P   A    P       A  S         S  P   A
Sbjct: 341 YKAKPTYKAKPTYPST---YKAKPSYPPTYKAKPSYPPTYKA 379



 Score = 36.2 bits (82), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 31/105 (29%), Gaps = 3/105 (2%)

Query: 151 YGRKPEYESGYGQKPEYESGYGGKPGYESGYGSKPEFESGYGRKPDMSPATGVSMMIGPA 210
           Y  KP Y   Y  KP Y S Y  KP Y   Y  K  +   Y  KP   P         P 
Sbjct: 621 YKAKPSYPPTYKAKPTYPSTYKAKPSYPPTYKPKISYPPTYKAKPSYPPTYKAKPSYPPT 680

Query: 211 MGVSPMNLAMGVNPIMSPGMAANRSMNLGMGVSQSMNPGMVASRS 255
               P   A   NP       A  S         S  P   A  S
Sbjct: 681 YKAKPTYKAKPTNPST---YKAKPSYPPTYKAKPSYPPTYKAKPS 722



 Score = 33.9 bits (76), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 25/74 (33%)

Query: 151 YGRKPEYESGYGQKPEYESGYGGKPGYESGYGSKPEFESGYGRKPDMSPATGVSMMIGPA 210
           Y  KP Y   Y  KP Y   Y  K  Y S Y +KP +   Y  KP   P         P 
Sbjct: 141 YKPKPSYPPTYKPKPSYPPSYKTKKTYPSSYKAKPSYPPTYKAKPSYPPTYKAKPSYPPT 200

Query: 211 MGVSPMNLAMGVNP 224
               P   A    P
Sbjct: 201 YKAKPTYKAKPTYP 214



 Score = 33.9 bits (76), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 28/80 (35%), Gaps = 6/80 (7%)

Query: 151 YGRKPEYESGYGQKPEYESGYGGKPGY------ESGYGSKPEFESGYGRKPDMSPATGVS 204
           Y  KP Y   Y  KP Y   Y  KP Y      +  Y +KP + S Y  KP   P+    
Sbjct: 383 YKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPTYKAKPTYPSTYKAKPSYPPSYKAK 442

Query: 205 MMIGPAMGVSPMNLAMGVNP 224
               P     P   A    P
Sbjct: 443 PSYPPTYKAKPTYKAKPTYP 462



 Score = 33.1 bits (74), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 27/80 (33%), Gaps = 6/80 (7%)

Query: 151 YGRKPEYESGYGQKPEYESGYGGKPGYE------SGYGSKPEFESGYGRKPDMSPATGVS 204
           Y  KP Y   Y  KP Y   Y  KP Y+      S Y +KP +   Y  KP   P     
Sbjct: 661 YKAKPSYPPTYKAKPSYPPTYKAKPTYKAKPTNPSTYKAKPSYPPTYKAKPSYPPTYKAK 720

Query: 205 MMIGPAMGVSPMNLAMGVNP 224
               P     P   A    P
Sbjct: 721 PSYPPTYKAKPTYKAKPTYP 740



 Score = 31.6 bits (70), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 16/43 (37%), Positives = 20/43 (46%)

Query: 147 GGSAYGRKPEYESGYGQKPEYESGYGGKPGYESGYGSKPEFES 189
             S Y  KP Y   Y  KP Y   Y  KP Y   Y +KP +++
Sbjct: 693 NPSTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPTYKA 735


>sp|Q12816|TROP_HUMAN Trophinin OS=Homo sapiens GN=TRO PE=1 SV=3
          Length = 1431

 Score = 39.3 bits (90), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 65/159 (40%), Gaps = 9/159 (5%)

Query: 127  YGRRPESGESGFGGR--TESEYGGSA-----YGRKPEYESGYGQKPEYESGYGGKPGYES 179
            +G  P +  +GFGG   T   +GGS+     +G        +   P   +G+GG     +
Sbjct: 919  FGGSPCT-STGFGGTLSTSVSFGGSSSTSANFGGTLSTSICFDGSPSTGAGFGGALNTSA 977

Query: 180  GYGSKPEFESGYGRKPDMSPATGVSMMIGPAMGVSP-MNLAMGVNPIMSPGMAANRSMNL 238
             +GS     +G+G     S   G ++      G SP  +++ G     + G     S N 
Sbjct: 978  SFGSVLNTSTGFGGAMSTSADFGGTLSTSVCFGGSPGTSVSFGSALNTNAGYGGAVSTNT 1037

Query: 239  GMGVSQSMNPGMVASRSTSRGMGGNLNLNTKAGTAVVRS 277
              G + S +     S STS G GG LN N   G AV  S
Sbjct: 1038 DFGGTLSTSVCFGGSPSTSAGFGGALNTNASFGCAVSTS 1076


>sp|Q79FW4|PPE12_MYCTU Uncharacterized PPE family protein PPE12 OS=Mycobacterium
           tuberculosis GN=ppe12 PE=3 SV=1
          Length = 645

 Score = 33.9 bits (76), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 43/106 (40%), Gaps = 17/106 (16%)

Query: 112 SGYGRKPDSEVHGSGYGRRPESGESGFGGRTESEYGG--------SAYGRKPEYESGYGQ 163
           +G+G   D     SG+G    SG SGF        G         S +    +  +GY  
Sbjct: 515 TGFGNTTDGLGENSGFGN-AGSGNSGFNNSGRGNSGAQNVGNLQISGFANSGQSVTGYNN 573

Query: 164 KPEYESGYGGK-----PGYESGYGSKPEFESGYGR---KPDMSPAT 201
                SG+G K      G+ SG+G+    +SG+G     PD + AT
Sbjct: 574 SVSVTSGFGNKGTGLFSGFMSGFGNTGFLQSGFGNLEANPDNNSAT 619


>sp|P02672|FIBA_BOVIN Fibrinogen alpha chain OS=Bos taurus GN=FGA PE=1 SV=5
          Length = 615

 Score = 32.7 bits (73), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 7/60 (11%)

Query: 54  PGRPQPQPAYGFQPGMGRPEPYGSGRPESEYASGYAKRPDSQEYGSGYGK-RPESEEYGS 112
           PGRP+P  A  + PG  RPEP  +G   +  +   + RPDS    SG+G  RP S ++G+
Sbjct: 354 PGRPEPGSAGTWNPG--RPEPGSAGTWNTGSSGSSSFRPDS----SGHGNIRPSSPDWGT 407



 Score = 31.6 bits (70), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 53/120 (44%), Gaps = 22/120 (18%)

Query: 54  PGRPQPQPAYGFQPGMGRPEP-----YGSGRPESEYASGYAK-RPDSQEYGSGYGKRPES 107
           PGRP+P  A  + P  GRPEP     +  GRPE   A  +   RP+    G+    RPE 
Sbjct: 315 PGRPEPGSAGTWNP--GRPEPGSAGTWNPGRPEPGSAGTWNPGRPEPGSAGTWNPGRPEP 372

Query: 108 EEYGSGY-------GRKPDSEVHGSGYGRRPESGESGFGGRTESEYGGSAYGRKPEYESG 160
              G+           +PDS  HG+    RP S + G    T  E G  + G K E+ +G
Sbjct: 373 GSAGTWNTGSSGSSSFRPDSSGHGN---IRPSSPDWG----TFREEGSVSSGTKQEFHTG 425


>sp|Q8BFW7|LPP_MOUSE Lipoma-preferred partner homolog OS=Mus musculus GN=Lpp PE=1 SV=1
          Length = 613

 Score = 31.6 bits (70), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 69/156 (44%), Gaps = 30/156 (19%)

Query: 31  TLTKLSITSTAPTPDQSLVPVSYPG--RPQPQP---AYGFQPGMGRPE---PYGSGRPES 82
           T TK S T   P P  + +PV+  G  +PQPQP   +Y       RP       S +P  
Sbjct: 174 TATKKSATKPQPAPQAAPIPVTPIGTLKPQPQPVPASYTTASTSSRPTFNVQVKSAQPSP 233

Query: 83  EYASGYAKRPDS-QEYGS---GYGKRPESEEYGSGYGRKPDSEVHGSGYGRRPESG---E 135
            Y +G    P S Q YG    GY  +P      SG    P + V G+ Y   P SG   E
Sbjct: 234 HYMAG----PSSGQIYGPGPRGYNNQPVPV---SGQCPPPPTCV-GTDYAYIPPSGHPPE 285

Query: 136 SGFG-----GRTESEY--GGSAYGRKPEYESGYGQK 164
           SG+G     GR    Y   G +YG + E ++ YGQ+
Sbjct: 286 SGYGYTSNQGRYYEPYYAAGPSYGGRSEGDTAYGQQ 321


>sp|A4J5X2|IF2_DESRM Translation initiation factor IF-2 OS=Desulfotomaculum reducens
           (strain MI-1) GN=infB PE=3 SV=1
          Length = 985

 Score = 31.6 bits (70), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 62/134 (46%), Gaps = 16/134 (11%)

Query: 55  GRPQPQPAYGFQPGMGRPEPYGSGRPESEYASGYAKRPDSQEYGSGYGKRPESEEYGSGY 114
           GRP     YG +P  G+  PYG  RP+      Y  RP   + G  YG RP+  +    Y
Sbjct: 209 GRP-----YGDRPQGGQGRPYGD-RPQGGQGRPYGDRPQGGQ-GRPYGDRPQGGQ-SRPY 260

Query: 115 GRKPDSEVHGSGYGRRPESGESG-FGGRTESEYGGSAYGRKPEYESG--YGQKPEYESGY 171
           G +P     G  YG RP+ G+S  +G R +    G  YG +P+   G  YG +P+   G 
Sbjct: 261 GDRPQGG-QGRPYGDRPQGGQSRPYGDRPQGGQ-GRPYGDRPQGGQGRHYGDRPQGGQGR 318

Query: 172 ---GGKPGYESGYG 182
               G+PG   G G
Sbjct: 319 PQGAGRPGANRGAG 332


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.311    0.131    0.381 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 143,063,805
Number of Sequences: 539616
Number of extensions: 7517440
Number of successful extensions: 22947
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 709
Number of HSP's that attempted gapping in prelim test: 17668
Number of HSP's gapped (non-prelim): 2791
length of query: 332
length of database: 191,569,459
effective HSP length: 118
effective length of query: 214
effective length of database: 127,894,771
effective search space: 27369480994
effective search space used: 27369480994
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)