Your job contains 1 sequence.
>020002
MGSLQGPVFCPAVRARQGGLYNTVPSTGPVMKARFFRSELWGFKGLTAVKTKVGVFTRQQ
NARKCKIVQCTFSSSSNGNGSMAENFNENDEDFVNSSVVEAVEVKSGADGFMIKMRDGRH
LRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVRTRDAKRVAYGGNAQCANCRPT
LYQVVKEMIEKMGYEVRLVRVTKRVHEAYFAQLYLTKVGNETECVSFDLRPSDAINIAVR
CKVPIQVNKYLAYSDGMRVIESGKLSTHSPGSDGLLFTELDKPSGQPCLDTKEFNLVRNM
LIAAVEERYRDAAQWRDKLGQLRAKRNLRKFT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020002
(332 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2018422 - symbol:BBD1 "AT1G75380" species:3702... 1106 4.6e-112 1
TAIR|locus:2013164 - symbol:BBD2 "bifunctional nuclease i... 1063 1.7e-107 1
TAIR|locus:2156842 - symbol:AT5G66050 species:3702 "Arabi... 289 1.8e-25 1
>TAIR|locus:2018422 [details] [associations]
symbol:BBD1 "AT1G75380" species:3702 "Arabidopsis
thaliana" [GO:0004518 "nuclease activity" evidence=IDA] [GO:0050832
"defense response to fungus" evidence=IMP] [GO:0031063 "regulation
of histone deacetylation" evidence=IGI] [GO:0043565
"sequence-specific DNA binding" evidence=IDA;IPI] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IGI]
InterPro:IPR001943 InterPro:IPR003729 Pfam:PF02151 Pfam:PF02577
PROSITE:PS50151 PROSITE:PS51658 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0050832 GO:GO:0004518
EMBL:AC023754 EMBL:AY054232 EMBL:AY066045 EMBL:AY087417
IPI:IPI00543627 PIR:C96784 RefSeq:NP_177671.1 RefSeq:NP_849890.1
RefSeq:NP_849891.1 UniGene:At.23222 ProteinModelPortal:Q9FWS6
SMR:Q9FWS6 STRING:Q9FWS6 EnsemblPlants:AT1G75380.1
EnsemblPlants:AT1G75380.2 EnsemblPlants:AT1G75380.3 GeneID:843874
KEGG:ath:AT1G75380 TAIR:At1g75380 eggNOG:COG1259
HOGENOM:HOG000029667 InParanoid:Q9FWS6 OMA:LQGPVIC PhylomeDB:Q9FWS6
ProtClustDB:CLSN2682514 Genevestigator:Q9FWS6 SUPFAM:SSF103256
Uniprot:Q9FWS6
Length = 325
Score = 1106 (394.4 bits), Expect = 4.6e-112, P = 4.6e-112
Identities = 230/335 (68%), Positives = 260/335 (77%)
Query: 1 MGSLQGPVFCPAVRARQ-GGLYNTVPSTGPVMKARFFRSELWGFKGLTAVKTKVGVFTRQ 59
M S+Q PV CPA+R RQ G + V TG +K R S+ WG + VK++ G T
Sbjct: 1 MRSVQAPVVCPAIRPRQVGACASLVNYTG--LKPR---SQFWGNR-TKGVKSQ-GT-TTT 52
Query: 60 QNARKC-KIVQCTFSSSSNGNGSMAXXXXXXXXXXVNSSVVEAVEVKSGADGFMIKMRDG 118
R C K ++C FSS S+GNGS A VNSSVVEAVEVKSGADGFM+KMRDG
Sbjct: 53 ITLRLCNKSIKCVFSSHSDGNGSTAENFNENDEEYVNSSVVEAVEVKSGADGFMVKMRDG 112
Query: 119 RHLRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIV-RTRDAKRVAYGGNAQCANC 177
R LRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIV +A N Q A
Sbjct: 113 RQLRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAMTNVQIA-- 170
Query: 178 RPTLYQVVKEMIEKMGYEVRLVRVTKRVHEAYFAQLYLTKVGNETECVSFDLRPSDAINI 237
RPT+YQVVKEM++KMGYEVRLVRVTKRVHEAYFAQL+L+KVGN +ECVSFDLRPSDAINI
Sbjct: 171 RPTMYQVVKEMVDKMGYEVRLVRVTKRVHEAYFAQLFLSKVGNASECVSFDLRPSDAINI 230
Query: 238 AVRCKVPIQVNKYLAYSDGMRVIESGKLSTHSPGSDGLLFTELDKPSGQPCLDTKEFNLV 297
AVRCK+PIQVNKYLAYSDGMRVIESGK+ST +P SDGLLFTE D+P+GQ CLDTKEFN++
Sbjct: 231 AVRCKIPIQVNKYLAYSDGMRVIESGKISTPAPASDGLLFTEQDRPNGQACLDTKEFNIL 290
Query: 298 RNMLIAAVEERYRDAAQWRDKLGQLRAKRNLRKFT 332
M+ A EERY +AA+WRDKLGQ RAKRNLRK+T
Sbjct: 291 SKMMQAVDEERYDEAAEWRDKLGQFRAKRNLRKYT 325
>TAIR|locus:2013164 [details] [associations]
symbol:BBD2 "bifunctional nuclease in basal defense
response 2" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0006289 "nucleotide-excision repair"
evidence=IEA] [GO:0009611 "response to wounding" evidence=ISS]
InterPro:IPR001943 InterPro:IPR003729 Pfam:PF02151 Pfam:PF02577
PROSITE:PS50151 PROSITE:PS51658 EMBL:CP002684 GO:GO:0005634
GO:GO:0090305 GO:GO:0004518 HOGENOM:HOG000029667
ProtClustDB:CLSN2682514 SUPFAM:SSF103256 EMBL:AC024609
EMBL:AY035016 EMBL:AY059082 EMBL:AK317508 EMBL:AY088015
IPI:IPI00546371 IPI:IPI00547716 PIR:D86329 RefSeq:NP_001031068.1
RefSeq:NP_564093.1 UniGene:At.16184 ProteinModelPortal:Q93VH2
SMR:Q93VH2 STRING:Q93VH2 EnsemblPlants:AT1G19660.1
EnsemblPlants:AT1G19660.2 GeneID:838553 KEGG:ath:AT1G19660
TAIR:At1g19660 InParanoid:Q93VH2 OMA:TRVHEAY PhylomeDB:Q93VH2
Genevestigator:Q93VH2 Uniprot:Q93VH2
Length = 329
Score = 1063 (379.3 bits), Expect = 1.7e-107, P = 1.7e-107
Identities = 214/333 (64%), Positives = 255/333 (76%)
Query: 1 MGSLQGPVFCPAVRARQGGLYNTVPSTGPVMKARFFRSELWGFKGLTAVKTKVGVFTRQQ 60
M SLQ PV CP+VR RQ G+ + + V K R R + WG + K++ +
Sbjct: 1 MRSLQAPVVCPSVRPRQLGVSALLVNCS-VSKTRSLRKQFWGNQTKND-KSQAATVNLRL 58
Query: 61 NARKCKIVQCTFSSSSNGNGSMAXXXXXXXXXXVNSSVVEAVEVKSGADGFMIKMRDGRH 120
+ R+ K ++C FSS S+G GS A V SSV+EAVEVKSG DGFM+KM+DGR
Sbjct: 59 HLRRYKSIKCLFSSHSDGTGSTAENFNENDEDYVKSSVLEAVEVKSGPDGFMVKMKDGRQ 118
Query: 121 LRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIV-RTRDAKRVAYGGNAQCANCRP 179
LRCVHNNPQGG+LP+YAPH AIVLKMEDGTGLLLPIIV +A N Q A RP
Sbjct: 119 LRCVHNNPQGGNLPNYAPHSAIVLKMEDGTGLLLPIIVLEMPSVLLMAAMTNVQIA--RP 176
Query: 180 TLYQVVKEMIEKMGYEVRLVRVTKRVHEAYFAQLYLTKVGNETECVSFDLRPSDAINIAV 239
T+YQVVK+M++KMGYEVRLVRVT RVHEAYFA+LYL+KVG++++CVSFDLRPSDAINIAV
Sbjct: 177 TMYQVVKDMVDKMGYEVRLVRVTTRVHEAYFAELYLSKVGDKSDCVSFDLRPSDAINIAV 236
Query: 240 RCKVPIQVNKYLAYSDGMRVIESGKLSTHSPGSDGLLFTELDKPSGQPCLDTKEFNLVRN 299
RCKVPIQVNKYLAYSDGMRVI+SGKLS +P SDGLLFTELD+P+GQPC DTKEF+LVRN
Sbjct: 237 RCKVPIQVNKYLAYSDGMRVIDSGKLSKQTPASDGLLFTELDRPNGQPCFDTKEFDLVRN 296
Query: 300 MLIAAVEERYRDAAQWRDKLGQLRAKRNLRKFT 332
M+ A EERY +AA+WRDKLG+ +AKR LRK+T
Sbjct: 297 MMQAVDEERYDEAAEWRDKLGKFQAKRKLRKYT 329
>TAIR|locus:2156842 [details] [associations]
symbol:AT5G66050 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004518 "nuclease
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR001943 InterPro:IPR003729 Pfam:PF02151 Pfam:PF02577
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF103256 KO:K08999
EMBL:BT006066 EMBL:AK118771 IPI:IPI00525695 RefSeq:NP_201406.2
UniGene:At.28884 ProteinModelPortal:Q8GWL4 SMR:Q8GWL4 PaxDb:Q8GWL4
PRIDE:Q8GWL4 EnsemblPlants:AT5G66050.1 GeneID:836735
KEGG:ath:AT5G66050 TAIR:At5g66050 eggNOG:NOG292889
HOGENOM:HOG000131624 InParanoid:Q8GWL4 OMA:VGEFAIE PhylomeDB:Q8GWL4
ProtClustDB:CLSN2680621 ArrayExpress:Q8GWL4 Genevestigator:Q8GWL4
Uniprot:Q8GWL4
Length = 340
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 74/200 (37%), Positives = 112/200 (56%)
Query: 128 PQG-GHLPDYAPHPAIVLKMEDGTGLLLPIIVRTRDAKR---VAYGGNAQCANCRPTLYQ 183
P G G L + P I LK+ LLP+IV ++ V G+ + C P +Q
Sbjct: 132 PIGLGFLRQFK-QPTIFLKISCDGDYLLPVIVGDAAVEKLLDVPLQGHTE--EC-PDQFQ 187
Query: 184 VVKEMIEKMGYEVRLVRVTKRVHEAYFAQLYLTKVGNETECVSFDLRPSDAINIAVRCKV 243
V +++K+GYEV++V++T R+ Y+A L L K G + E + D RPSDAIN+A C+
Sbjct: 188 FVSAVVDKLGYEVKMVKLTGRIVNTYYASLCLGKPG-DIEAICIDSRPSDAINVARACQA 246
Query: 244 PIQVNKYLAYSDGMRVIESGKLSTHSPGSDGLLFTELDKPSGQPCLDTKEFNLVRNMLIA 303
PI VNK + + +++ G+ + P + +L + D P P ++E LVRNM +A
Sbjct: 247 PIYVNKAIVLEEAIKIGYGGRPQSAKPVFNVILDSAPDGPD--PL--SEELKLVRNMDLA 302
Query: 304 AVEERYRDAAQWRDKLGQLR 323
+ EERY DAA WRD+L L+
Sbjct: 303 SKEERYIDAAMWRDRLKNLQ 322
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.406 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 332 322 0.00085 116 3 11 22 0.37 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 611 (65 KB)
Total size of DFA: 216 KB (2120 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.31u 0.10s 23.41t Elapsed: 00:00:01
Total cpu time: 23.31u 0.10s 23.41t Elapsed: 00:00:01
Start: Mon May 20 22:30:18 2013 End: Mon May 20 22:30:19 2013