BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020005
(332 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|147819141|emb|CAN68957.1| hypothetical protein VITISV_015733 [Vitis vinifera]
Length = 330
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/332 (68%), Positives = 266/332 (80%), Gaps = 7/332 (2%)
Query: 6 LTVSVNTLNYPSCTLGFVNSYRTLSRTRLNSNPLLAMPPSSVLLQTDESGKFQESKKSFG 65
+ +S ++L YPS +G V+ + L RT NP+LA+PPSS LLQTDESG ESK S G
Sbjct: 1 MAMSFHSLKYPSHMMGNVHKHXILXRTM--KNPILAVPPSSTLLQTDESGNLPESKNSSG 58
Query: 66 SKAAPFCSDA---LLNQANTVGIVGGASVDSTLNLLGKLVQLSGEE--NDFPFLLCSDPL 120
S AA SD+ +NQA TVGI+GG SVDSTLN L KLVQ S ++ + PF+LCSDP+
Sbjct: 59 SDAASTNSDSASLFINQATTVGIIGGVSVDSTLNFLKKLVQWSSKDGGDSLPFVLCSDPV 118
Query: 121 LNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWH 180
LNK+LLSH+RS F L+ K ++D + IV NL+ KR FLE++G +CIVMPCH+SH WH
Sbjct: 119 LNKQLLSHERSHFPLLSTKRESSRMDHTPIVGNLQSKRAFLERSGVQCIVMPCHISHSWH 178
Query: 181 DEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEG 240
DE+ +G SVPFLH+ ECVA+ELK A +KPLEAGSPLRIGVLA NA LTAGFYQEKLQ EG
Sbjct: 179 DEISRGXSVPFLHMGECVARELKNAKLKPLEAGSPLRIGVLATNATLTAGFYQEKLQREG 238
Query: 241 FEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLL 300
FEVVLPDKATMEHT+IPA++ALNRKD+EGARNLLRIALQVLLVRAVNTVILASDDM DLL
Sbjct: 239 FEVVLPDKATMEHTVIPAIEALNRKDMEGARNLLRIALQVLLVRAVNTVILASDDMHDLL 298
Query: 301 PPDDPLLKKCIDPMDALARSTIKWVKSAEKGT 332
P DDPLLKKC+DPMDALARSTI W +S EKGT
Sbjct: 299 PRDDPLLKKCVDPMDALARSTIHWAQSVEKGT 330
>gi|255553111|ref|XP_002517598.1| racemase and epimerase, acting on amino acids and derivatives,
putative [Ricinus communis]
gi|223543230|gb|EEF44762.1| racemase and epimerase, acting on amino acids and derivatives,
putative [Ricinus communis]
Length = 330
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/334 (70%), Positives = 274/334 (82%), Gaps = 6/334 (1%)
Query: 1 MFDRSLTVSVNTLNYPSCTLGFVNSYRTLSRTRLNSNPLLAMPPSSVLLQTDESGKFQES 60
MFD SL +S ++LNYPS VN+++T + R SN + A+PPSSV+L TDESG+F+ S
Sbjct: 1 MFDGSLIMSFHSLNYPSHRFNNVNTHKTSYKAR--SNLVQAVPPSSVILHTDESGRFRGS 58
Query: 61 KKSFGSKAAPFCSDALLNQANTVGIVGGASVDSTLNLLGKLVQLSGEE--NDFPFLLCSD 118
KKS GS + SD LLNQANTVGI+GG SV+ LN L KLVQ S E+ + PF+LCSD
Sbjct: 59 KKSSGSTSD--SSDLLLNQANTVGIIGGTSVNCALNFLKKLVQWSSEDGKDSLPFVLCSD 116
Query: 119 PLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHI 178
P+LNKELLSH+R F S+ + +LD + IVENLR KRVFLE++GARCIVMPCH+SH
Sbjct: 117 PVLNKELLSHERDFFPSIGRQKEYSKLDHAQIVENLRSKRVFLERSGARCIVMPCHISHS 176
Query: 179 WHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQH 238
WH++V KGCS+ FLH+ ECVA+ELKEA +KPLEAGSPLRIGVLA NA LTAGFYQEKLQ
Sbjct: 177 WHEQVSKGCSIHFLHMGECVARELKEAKLKPLEAGSPLRIGVLAANATLTAGFYQEKLQS 236
Query: 239 EGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQD 298
EGFEVVLPDKATMEHT+IPA+ ALNRKD+EGARNLLRIALQVLLVRAVNTVILASDDM+D
Sbjct: 237 EGFEVVLPDKATMEHTIIPAIGALNRKDMEGARNLLRIALQVLLVRAVNTVILASDDMRD 296
Query: 299 LLPPDDPLLKKCIDPMDALARSTIKWVKSAEKGT 332
LLP +DPLLKKCIDPMDAL R+TIKW K+AEK T
Sbjct: 297 LLPQNDPLLKKCIDPMDALVRATIKWAKAAEKDT 330
>gi|224070839|ref|XP_002303258.1| predicted protein [Populus trichocarpa]
gi|222840690|gb|EEE78237.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/334 (67%), Positives = 271/334 (81%), Gaps = 6/334 (1%)
Query: 1 MFDRSLTVSVNTLNYPSCTLGFVNSYRTLSRTRLNSNPLLAMPPSSVLLQTDESGKFQES 60
MFD SL + +TL +P LG VN++R L ++RL P+LA+PPSS+LL TDESGKF +S
Sbjct: 1 MFDGSLAMPFHTL-HPCHLLGHVNTHRALHKSRLQ--PVLAIPPSSILLHTDESGKFPDS 57
Query: 61 KKSFGSKAAPFCSDALLNQANTVGIVGGASVDSTLNLLGKLVQLSGEEND--FPFLLCSD 118
KK G + SD+LL+QANTVGI+GG SV+S LN L KLVQ S +E FPF+LCSD
Sbjct: 58 KKGSGLRGRD-SSDSLLSQANTVGIIGGISVNSALNFLKKLVQGSSKEGKDCFPFVLCSD 116
Query: 119 PLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHI 178
P+LNKELLSH+R+S D S I ENL+ KRVFLEK+G +CIVMPCH+ H
Sbjct: 117 PVLNKELLSHERNSCPCPRRHNEKSPSDHSAIAENLQNKRVFLEKSGVQCIVMPCHILHS 176
Query: 179 WHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQH 238
WHDEV KGCS+PFLH+ ECVA+ELKEA +KPLEAGSPLRIG+LA NA L AGFYQEKLQ+
Sbjct: 177 WHDEVSKGCSLPFLHMGECVARELKEAKLKPLEAGSPLRIGLLASNATLAAGFYQEKLQN 236
Query: 239 EGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQD 298
EGFEVVLPDKATMEHT+IPA++AL+R D+EGA+NLLRIALQVLLVRAVNTVILAS++M+D
Sbjct: 237 EGFEVVLPDKATMEHTIIPAIEALDRNDMEGAQNLLRIALQVLLVRAVNTVILASEEMRD 296
Query: 299 LLPPDDPLLKKCIDPMDALARSTIKWVKSAEKGT 332
+LP DDPLLKKCIDPMDALARSTIKW ++A+KGT
Sbjct: 297 VLPEDDPLLKKCIDPMDALARSTIKWAQAADKGT 330
>gi|225442873|ref|XP_002281753.1| PREDICTED: uncharacterized protein LOC100249822 [Vitis vinifera]
Length = 305
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/300 (71%), Positives = 247/300 (82%), Gaps = 5/300 (1%)
Query: 37 NPLLAMPPSSVLLQTDESGKFQESKKSFGSKAAPFCSDA---LLNQANTVGIVGGASVDS 93
NP+LA+PPSS LLQTDESG ESK S GS AA SD+ +NQA TVGI+GG SVDS
Sbjct: 3 NPILAVPPSSTLLQTDESGNLPESKNSSGSDAASTNSDSASLFINQATTVGIIGGVSVDS 62
Query: 94 TLNLLGKLVQLSGEE--NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIV 151
TLN L KLVQ S ++ + PF+LCSDP+LNK+LLSH+RS F L+ K ++D + IV
Sbjct: 63 TLNFLKKLVQWSSKDGGDSLPFVLCSDPVLNKQLLSHERSHFPLLSTKRESSRMDHTPIV 122
Query: 152 ENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLE 211
NL+ KR FLE++G +CIVMPCH+SH WHDE+ +G SVPFLH+ ECVA+ELK A +KPLE
Sbjct: 123 GNLQSKRAFLERSGVQCIVMPCHISHSWHDEISRGSSVPFLHMGECVARELKNAKLKPLE 182
Query: 212 AGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGAR 271
AGSPLRIGVLA NA LTAGFYQEKLQ EGFEVVLPDKATMEHT+IPA++A NRKD+EGAR
Sbjct: 183 AGSPLRIGVLATNATLTAGFYQEKLQREGFEVVLPDKATMEHTVIPAIEAFNRKDMEGAR 242
Query: 272 NLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIKWVKSAEKG 331
NLLRIALQVLLVRAVNTVILASDDM DLLP DDPLLKKC+DPMDALARSTI W +S EKG
Sbjct: 243 NLLRIALQVLLVRAVNTVILASDDMHDLLPRDDPLLKKCVDPMDALARSTIHWAQSVEKG 302
>gi|449469004|ref|XP_004152211.1| PREDICTED: uncharacterized protein LOC101217164 [Cucumis sativus]
gi|449532820|ref|XP_004173376.1| PREDICTED: uncharacterized protein LOC101225587 [Cucumis sativus]
Length = 327
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/325 (63%), Positives = 258/325 (79%), Gaps = 11/325 (3%)
Query: 13 LNYPSCTLGFVNSYRTLSRTRLNSNPLLAMPPSSVLLQTDESGKFQESKKSFGS----KA 68
L+ SC +VN+ R + RLN P+ A+PPS+ LL TDES F ESKK+ G K
Sbjct: 6 LSSQSCISAYVNTRRIQLQWRLN--PVQALPPST-LLHTDESEHFPESKKTSGFSSVLKT 62
Query: 69 APFCSDALLNQANTVGIVGGASVDSTLNLLGKLVQLSGEEND----FPFLLCSDPLLNKE 124
+ LL+Q+NTVGI+GG+SV+ST+N LGKLV+ S ++ + PF+LCSDP L+ E
Sbjct: 63 NKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESQSGLPFVLCSDPTLSNE 122
Query: 125 LLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVC 184
L D+SS LN K + LD L+VE+L+ KR FLE +GARCIVMPCH+SH+W+++V
Sbjct: 123 LQVFDKSSHPVLNYKSEDLGLDSELVVESLKSKRTFLENSGARCIVMPCHISHLWYEDVS 182
Query: 185 KGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVV 244
KGC V FLH+++CVA+ELKEA +KPLEAGSPLRIGVLA NAIL+AG+YQEKLQ+EGFEVV
Sbjct: 183 KGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFEVV 242
Query: 245 LPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
LPDKATMEHT+IPA++ALNRKD+EGARNLLRIALQVLLVRAVN+VILASDD++D+LP DD
Sbjct: 243 LPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKDILPLDD 302
Query: 305 PLLKKCIDPMDALARSTIKWVKSAE 329
PLL++CIDPMDALARSTI W + AE
Sbjct: 303 PLLRRCIDPMDALARSTINWAQCAE 327
>gi|357455147|ref|XP_003597854.1| Aspartate racemase [Medicago truncatula]
gi|355486902|gb|AES68105.1| Aspartate racemase [Medicago truncatula]
Length = 318
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/334 (64%), Positives = 256/334 (76%), Gaps = 30/334 (8%)
Query: 12 TLNYPSCTL-GFVN------SYRTLSRTRLNSNPLLAMPPSSVLLQTDESGKFQESKKSF 64
+L Y S TL GFV+ + R L ++R S +L+ PPSSV+L DESGKF SK
Sbjct: 2 SLCYQSQTLFGFVSILNPNLNPRYLCKSR--SWKVLSTPPSSVILNADESGKF--SKNLV 57
Query: 65 GS----KAAPFCSDALLNQANTVGIVGGASVDSTLNLLGKLVQLSGE--ENDFPFLLCSD 118
GS +PF Q TVGI+GG SVD+TLN L KLV+LS + +N PFLLCSD
Sbjct: 58 GSVRNDSVSPFGY-----QGTTVGIIGGMSVDATLNFLRKLVELSSQDGQNPIPFLLCSD 112
Query: 119 PLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHI 178
P+LNKELLS++RS S ++D S IV++LR KRVFLE +GARCIVMPC++SH
Sbjct: 113 PILNKELLSYERSLES--------FKVDSSQIVQSLRNKRVFLENSGARCIVMPCNVSHS 164
Query: 179 WHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQH 238
W+++V GCSVPFLH++ECVAKELKEA +KPLEAGSPLRIGVLA NA L AGFY+EKLQ+
Sbjct: 165 WYEQVSIGCSVPFLHMAECVAKELKEAKLKPLEAGSPLRIGVLATNATLAAGFYKEKLQN 224
Query: 239 EGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQD 298
EGFEV+LPD+ATMEHT+IPA +AL+RKD+EGA NLLRIALQVLLVRAVN VILASD+M+D
Sbjct: 225 EGFEVILPDRATMEHTVIPATEALSRKDMEGACNLLRIALQVLLVRAVNFVILASDEMRD 284
Query: 299 LLPPDDPLLKKCIDPMDALARSTIKWVKSAEKGT 332
+LP DDPLLKKCIDPMDALARSTIKWV+S T
Sbjct: 285 VLPHDDPLLKKCIDPMDALARSTIKWVRSCGDNT 318
>gi|87162592|gb|ABD28387.1| Asp/Glu racemase [Medicago truncatula]
Length = 321
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/334 (64%), Positives = 256/334 (76%), Gaps = 30/334 (8%)
Query: 12 TLNYPSCTL-GFVN------SYRTLSRTRLNSNPLLAMPPSSVLLQTDESGKFQESKKSF 64
+L Y S TL GFV+ + R L ++R S +L+ PPSSV+L DESGKF SK
Sbjct: 5 SLCYQSQTLFGFVSILNPNLNPRYLCKSR--SWKVLSTPPSSVILNADESGKF--SKNLV 60
Query: 65 GS----KAAPFCSDALLNQANTVGIVGGASVDSTLNLLGKLVQLSGE--ENDFPFLLCSD 118
GS +PF Q TVGI+GG SVD+TLN L KLV+LS + +N PFLLCSD
Sbjct: 61 GSVRNDSVSPFGY-----QGTTVGIIGGMSVDATLNFLRKLVELSSQDGQNPIPFLLCSD 115
Query: 119 PLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHI 178
P+LNKELLS++RS S ++D S IV++LR KRVFLE +GARCIVMPC++SH
Sbjct: 116 PILNKELLSYERSLES--------FKVDSSQIVQSLRNKRVFLENSGARCIVMPCNVSHS 167
Query: 179 WHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQH 238
W+++V GCSVPFLH++ECVAKELKEA +KPLEAGSPLRIGVLA NA L AGFY+EKLQ+
Sbjct: 168 WYEQVSIGCSVPFLHMAECVAKELKEAKLKPLEAGSPLRIGVLATNATLAAGFYKEKLQN 227
Query: 239 EGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQD 298
EGFEV+LPD+ATMEHT+IPA +AL+RKD+EGA NLLRIALQVLLVRAVN VILASD+M+D
Sbjct: 228 EGFEVILPDRATMEHTVIPATEALSRKDMEGACNLLRIALQVLLVRAVNFVILASDEMRD 287
Query: 299 LLPPDDPLLKKCIDPMDALARSTIKWVKSAEKGT 332
+LP DDPLLKKCIDPMDALARSTIKWV+S T
Sbjct: 288 VLPHDDPLLKKCIDPMDALARSTIKWVRSCGDNT 321
>gi|297743412|emb|CBI36279.3| unnamed protein product [Vitis vinifera]
Length = 443
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/257 (72%), Positives = 216/257 (84%), Gaps = 2/257 (0%)
Query: 77 LNQANTVGIVGGASVDSTLNLLGKLVQLSGEE--NDFPFLLCSDPLLNKELLSHDRSSFS 134
L + TVGI+GG SVDSTLN L KLVQ S ++ + PF+LCSDP+LNK+LLSH+RS F
Sbjct: 184 LMRTTTVGIIGGVSVDSTLNFLKKLVQWSSKDGGDSLPFVLCSDPVLNKQLLSHERSHFP 243
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
L+ K ++D + IV NL+ KR FLE++G +CIVMPCH+SH WHDE+ +G SVPFLH+
Sbjct: 244 LLSTKRESSRMDHTPIVGNLQSKRAFLERSGVQCIVMPCHISHSWHDEISRGSSVPFLHM 303
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHT 254
ECVA+ELK A +KPLEAGSPLRIGVLA NA LTAGFYQEKLQ EGFEVVLPDKATMEHT
Sbjct: 304 GECVARELKNAKLKPLEAGSPLRIGVLATNATLTAGFYQEKLQREGFEVVLPDKATMEHT 363
Query: 255 LIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPM 314
+IPA++A NRKD+EGARNLLRIALQVLLVRAVNTVILASDDM DLLP DDPLLKKC+DPM
Sbjct: 364 VIPAIEAFNRKDMEGARNLLRIALQVLLVRAVNTVILASDDMHDLLPRDDPLLKKCVDPM 423
Query: 315 DALARSTIKWVKSAEKG 331
DALARSTI W +S EKG
Sbjct: 424 DALARSTIHWAQSVEKG 440
>gi|356557255|ref|XP_003546933.1| PREDICTED: probable amino-acid racemase-like [Glycine max]
Length = 363
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/329 (64%), Positives = 252/329 (76%), Gaps = 10/329 (3%)
Query: 10 VNTLNYPSCTL--GFVN--SYRTLSRTRLNSNPLLAMPPSSVLLQTDESGKFQESKKSFG 65
V +L+YP TL G V S R LS+TR + A PPSS++L DESGKF E K G
Sbjct: 39 VMSLSYPFQTLLLGCVTTPSRRYLSKTRWYQ--VQATPPSSLILNADESGKFSE--KLHG 94
Query: 66 SKAAPFCSDALLNQANTVGIVGGASVDSTLNLLGKLVQLSGEE--NDFPFLLCSDPLLNK 123
S A + Q + VGI+GG S+D+TL L KLV+ S E+ N PF+LCSDPLL+K
Sbjct: 95 SNLASGRGAPFVTQGSAVGIIGGVSMDATLKFLRKLVEFSSEDGANSIPFVLCSDPLLSK 154
Query: 124 ELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEV 183
ELLS++RS F+S K ++ D S IV+ LR KRVFLE G C VMPC++SH W+++V
Sbjct: 155 ELLSYERSIFASSTSKAENLKQDSSPIVQTLRNKRVFLENFGTSCTVMPCNVSHSWYEQV 214
Query: 184 CKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEV 243
+GCSVP LH++ECVAKELKEA +KPLEAGSPLRIGVLA NA L AG Y+EKLQ+EGF+V
Sbjct: 215 SEGCSVPVLHMAECVAKELKEAKLKPLEAGSPLRIGVLATNATLAAGVYKEKLQNEGFDV 274
Query: 244 VLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPD 303
VLPD+ATMEHT+IPA++ALNRKD+EGA NLLRIALQVLLVRA N+VILASDDM+DLLPPD
Sbjct: 275 VLPDRATMEHTVIPAMEALNRKDMEGACNLLRIALQVLLVRAANSVILASDDMRDLLPPD 334
Query: 304 DPLLKKCIDPMDALARSTIKWVKSAEKGT 332
DPLLKKCIDPMDALARSTIKWVKS+ T
Sbjct: 335 DPLLKKCIDPMDALARSTIKWVKSSGHNT 363
>gi|15218160|ref|NP_172993.1| aspartate-glutamate racemase-like protein [Arabidopsis thaliana]
gi|5103839|gb|AAD39669.1|AC007591_34 Is a member of the PF|01177 Aspartate-glutamate racemase family.
EST gb|T43554 comes from this gene [Arabidopsis
thaliana]
gi|26983862|gb|AAN86183.1| unknown protein [Arabidopsis thaliana]
gi|332191198|gb|AEE29319.1| aspartate-glutamate racemase-like protein [Arabidopsis thaliana]
Length = 330
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/327 (58%), Positives = 241/327 (73%), Gaps = 11/327 (3%)
Query: 10 VNTLNYPSCTLGFV-NSYRTLSRTRLNSNPLLAMPPSSVLLQTDESGKFQESKKSF---- 64
+ N PS L + S R R RL+ +LAMPPSSVLL DES + KK F
Sbjct: 3 LQIFNNPSHGLAHLCYSSRVSCRVRLSR--VLAMPPSSVLLHMDESNDLPKPKKGFCLSE 60
Query: 65 --GSKAAPFCSDALLNQANTVGIVGGASVDSTLNLLGKLVQLSGEE--NDFPFLLCSDPL 120
+ +D+LL QANTVGI+GG S DSTL + KLV S + + PF+LCSDP
Sbjct: 61 DSRNSLNSLPADSLLRQANTVGIIGGVSTDSTLKFVKKLVDWSSNDGKSSLPFVLCSDPA 120
Query: 121 LNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWH 180
LNKELL ++ +S+ SL + +D LIVENLR KR +LE+ GA+ I+MPCH++HIW+
Sbjct: 121 LNKELLLYEENSYPSLYHREESTPVDPKLIVENLRNKRRYLERCGAKLILMPCHIAHIWY 180
Query: 181 DEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEG 240
+EVC+G VP LH+ EC+AKEL+EA MKPLEAG+PLR+GV+A +A L+AGFYQEKLQ G
Sbjct: 181 EEVCEGSLVPLLHMGECIAKELQEAKMKPLEAGNPLRVGVMATSATLSAGFYQEKLQSNG 240
Query: 241 FEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLL 300
FE VLPDKATMEHT+IP+++A+ RKD+EGARNLLRIALQVLLV+AVN V+L SD+M+DLL
Sbjct: 241 FEAVLPDKATMEHTVIPSIEAMKRKDMEGARNLLRIALQVLLVQAVNVVMLGSDEMRDLL 300
Query: 301 PPDDPLLKKCIDPMDALARSTIKWVKS 327
P DDPLLKKC+DPMDALARS IKW ++
Sbjct: 301 PGDDPLLKKCVDPMDALARSAIKWAEN 327
>gi|297844444|ref|XP_002890103.1| aspartate-glutamate racemase family [Arabidopsis lyrata subsp.
lyrata]
gi|297335945|gb|EFH66362.1| aspartate-glutamate racemase family [Arabidopsis lyrata subsp.
lyrata]
Length = 330
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/327 (58%), Positives = 241/327 (73%), Gaps = 11/327 (3%)
Query: 10 VNTLNYPSCTLGFV-NSYRTLSRTRLNSNPLLAMPPSSVLLQTDESGKFQESKKSF---- 64
+ N P L V S R + RL+ +LAMPPSS+LL DES + KK F
Sbjct: 3 LQIFNNPCHGLAHVCYSSRVSCKVRLSR--VLAMPPSSILLHMDESNDLPKPKKGFCPSE 60
Query: 65 --GSKAAPFCSDALLNQANTVGIVGGASVDSTLNLLGKLVQLSGEE--NDFPFLLCSDPL 120
+ +D+LL QANTVGI+GG S DSTL + KLV S ++ + PF+LCSDP
Sbjct: 61 DSRNSLNSLSADSLLRQANTVGIIGGVSTDSTLKFVKKLVDWSSKDGKSSLPFVLCSDPA 120
Query: 121 LNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWH 180
LNKELL ++ +S+ SL + +D LIV NLR KR +LEK GA+ I+MPCH++HIW+
Sbjct: 121 LNKELLLYEENSYPSLYHRAESTPVDPKLIVGNLRNKRRYLEKCGAKLILMPCHIAHIWY 180
Query: 181 DEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEG 240
+EVC+G SVP LH+ EC+AKEL+EA MKPLEAG+PLR+GV+A +A L+AGFYQEKLQ G
Sbjct: 181 EEVCEGSSVPLLHMGECIAKELQEAKMKPLEAGNPLRVGVMATSATLSAGFYQEKLQSNG 240
Query: 241 FEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLL 300
FE VLPDKATMEHT+IP+++A+ R+D+EGARNLLRIALQVLLV+AVN V+L SD+M+DLL
Sbjct: 241 FEAVLPDKATMEHTVIPSIEAMKREDMEGARNLLRIALQVLLVQAVNVVMLGSDEMRDLL 300
Query: 301 PPDDPLLKKCIDPMDALARSTIKWVKS 327
P DDPLLKKC+DPMDALARS IKW ++
Sbjct: 301 PGDDPLLKKCVDPMDALARSAIKWAEN 327
>gi|110740155|dbj|BAF01976.1| hypothetical protein [Arabidopsis thaliana]
Length = 330
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/327 (58%), Positives = 240/327 (73%), Gaps = 11/327 (3%)
Query: 10 VNTLNYPSCTLGFV-NSYRTLSRTRLNSNPLLAMPPSSVLLQTDESGKFQESKKSF---- 64
+ N PS L + S R R RL+ +LAMPPSSVLL DES + KK F
Sbjct: 3 LQIFNNPSHGLAHLCYSSRVSCRVRLSR--VLAMPPSSVLLHMDESNDLPKPKKGFCLSE 60
Query: 65 --GSKAAPFCSDALLNQANTVGIVGGASVDSTLNLLGKLVQLSGEE--NDFPFLLCSDPL 120
+ +D+LL QANTVGI+GG S DSTL + KLV S + + PF+LCSDP
Sbjct: 61 DSRNSLNSLPADSLLRQANTVGIIGGVSTDSTLKFVKKLVDWSSNDGKSSLPFVLCSDPA 120
Query: 121 LNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWH 180
LNKELL ++ +S+ SL + +D LIVENLR KR +LE+ GA+ I+MPCH++HIW+
Sbjct: 121 LNKELLLYEENSYPSLYHREESTPVDPKLIVENLRNKRRYLERCGAKLILMPCHIAHIWY 180
Query: 181 DEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEG 240
+EVC+G VP LH+ EC+AKEL+EA MKPLEAG+PLR+GV+A +A L+AGFYQEKLQ G
Sbjct: 181 EEVCEGSLVPLLHMGECIAKELQEAKMKPLEAGNPLRVGVMATSATLSAGFYQEKLQSNG 240
Query: 241 FEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLL 300
FE V PDKATMEHT+IP+++A+ RKD+EGARNLLRIALQVLLV+AVN V+L SD+M+DLL
Sbjct: 241 FEAVPPDKATMEHTVIPSIEAMKRKDMEGARNLLRIALQVLLVQAVNVVMLGSDEMRDLL 300
Query: 301 PPDDPLLKKCIDPMDALARSTIKWVKS 327
P DDPLLKKC+DPMDALARS IKW ++
Sbjct: 301 PGDDPLLKKCVDPMDALARSAIKWAEN 327
>gi|359484398|ref|XP_003633103.1| PREDICTED: uncharacterized protein LOC100853647 [Vitis vinifera]
gi|147821411|emb|CAN63506.1| hypothetical protein VITISV_011681 [Vitis vinifera]
Length = 324
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/325 (62%), Positives = 233/325 (71%), Gaps = 15/325 (4%)
Query: 11 NTLNYPSCTLGFVNSYRTLSRTRLNSNPLLAMPPSSVLLQTDESGKFQESKKSFGSKAA- 69
LN+P+ F+N RT R SNP A+ SSV +QTDESG ESKK G AA
Sbjct: 5 TVLNFPA----FLN--RTWCSGR--SNPSAAVQLSSVFIQTDESGNTPESKKILGPVAAV 56
Query: 70 PFCS--DALLNQANTVGIVGGASVDSTLNLLGKLVQLSGE--ENDFPFLLCSDPLLNKEL 125
C ++LL QANTVGI+GG SV STL L KLV S E PF++CSDP LN+EL
Sbjct: 57 ARCQAPNSLLTQANTVGILGGVSVFSTLIFLEKLVWWSSRHGEESLPFVVCSDPTLNREL 116
Query: 126 LSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCK 185
S S F K QLD IVENLR KR FLE++GARCIVMPCHL+H WH EV K
Sbjct: 117 ASPSLSPF--FRGKNAQFQLDHGPIVENLRCKRAFLEQSGARCIVMPCHLAHAWHSEVSK 174
Query: 186 GCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVL 245
GC +PFLHV ECVA ELK+A KPLEAGS +RIGVLA L AGFYQEKLQ +GFEVVL
Sbjct: 175 GCPLPFLHVGECVASELKKAKFKPLEAGSNVRIGVLAPGETLMAGFYQEKLQSQGFEVVL 234
Query: 246 PDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDP 305
PD ATMEH ++PA++AL+RKD+EGARNLLRIA+ + L+RAVN VILASD+MQDLLP DDP
Sbjct: 235 PDMATMEHIVVPAIEALHRKDMEGARNLLRIAVHIFLMRAVNIVILASDEMQDLLPRDDP 294
Query: 306 LLKKCIDPMDALARSTIKWVKSAEK 330
L KKCI+PMDALARSTI W KS E+
Sbjct: 295 LSKKCINPMDALARSTIGWAKSIEE 319
>gi|255566957|ref|XP_002524461.1| racemase and epimerase, acting on amino acids and derivatives,
putative [Ricinus communis]
gi|223536249|gb|EEF37901.1| racemase and epimerase, acting on amino acids and derivatives,
putative [Ricinus communis]
Length = 302
Score = 340 bits (871), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 167/277 (60%), Positives = 211/277 (76%), Gaps = 5/277 (1%)
Query: 59 ESKKSFGSKAAPF---CSDALLNQANTVGIVGGASVDSTLNLLGKLVQLSGE--ENDFPF 113
+S K+ GS AP S++LL +ANTVGI+GG SV STL L KLV +S E PF
Sbjct: 21 QSNKNSGSGRAPTEYQKSNSLLKRANTVGIIGGVSVLSTLIFLEKLVWMSSRNGEESIPF 80
Query: 114 LLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPC 173
++CSDP + +EL S S S + K ++L+ I+ENLR KR FL+++GARCIVMPC
Sbjct: 81 VVCSDPSITRELSSQSHVSCHSFSSKNAEIELNADEIIENLRCKRKFLDQSGARCIVMPC 140
Query: 174 HLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQ 233
HLSH W++E+ +GC +PF HV +CVA EL+EA +KPLEAGS +RIG+LA +A LTAGFYQ
Sbjct: 141 HLSHAWYNEISEGCLLPFFHVGDCVASELREAELKPLEAGSEVRIGMLASSATLTAGFYQ 200
Query: 234 EKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILAS 293
EKLQ +GFEVVLPDKAT +H LIPA++AL R+D+EGA+NLLR+A+Q+LL+RA N VILAS
Sbjct: 201 EKLQSQGFEVVLPDKATTDHILIPAIEALRRRDIEGAQNLLRVAIQILLMRAANIVILAS 260
Query: 294 DDMQDLLPPDDPLLKKCIDPMDALARSTIKWVKSAEK 330
D++Q LLP +DPL KKCIDPMDALARS IKW K K
Sbjct: 261 DELQGLLPQNDPLQKKCIDPMDALARSIIKWAKHKAK 297
>gi|357477995|ref|XP_003609283.1| hypothetical protein MTR_4g114000 [Medicago truncatula]
gi|355510338|gb|AES91480.1| hypothetical protein MTR_4g114000 [Medicago truncatula]
Length = 401
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 165/336 (49%), Positives = 218/336 (64%), Gaps = 14/336 (4%)
Query: 1 MFDRSLTVSVNTLNYPSCTLG--FVNSYRTLSRTRLNSNPLLAMPPSSVLLQTDESGKFQ 58
M +R + +S+ TLN+P G F N +T RTR +++ S + TDESG ++
Sbjct: 69 MLERGMLMSIQTLNHPQFLFGVAFRNRTQTQYRTRSSNSS------ISSVFLTDESGNYE 122
Query: 59 ESKKSFGSKAAPFCSDAL--LNQANTVGIVGGASVDSTLNLLGKLVQLSGEENDF--PFL 114
E S + L+Q NT+G++GG SV STL L KL S PF+
Sbjct: 123 EPGNGTSLMRGHISSASCIKLSQQNTIGVIGGVSVLSTLVFLEKLACWSSRNGKECPPFV 182
Query: 115 LCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCH 174
+CSDP+L+K L R SF S + ++L+ L+++NLR K L+++GAR + +PCH
Sbjct: 183 VCSDPVLSKAL--SLRGSFPSTRTRIDHIELNQELMIQNLRHKINVLQQSGARGLALPCH 240
Query: 175 LSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQE 234
LSH WH E+ K S+PFLHV +CVA ELK A MKP+ A S +RIG+L ++ +Y+E
Sbjct: 241 LSHAWHKEISKDSSLPFLHVGDCVAMELKNAKMKPIHATSTVRIGLLTTDSSFVVCYYKE 300
Query: 235 KLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASD 294
KLQ +GFEVVL DKAT EH L+PA+DAL RKD+EGARNLLRIA+ VLLVR VN VILASD
Sbjct: 301 KLQSQGFEVVLLDKATEEHILVPAVDALQRKDIEGARNLLRIAIHVLLVRGVNVVILASD 360
Query: 295 DMQDLLPPDDPLLKKCIDPMDALARSTIKWVKSAEK 330
D+ +LP +DPLLKKCIDPMDALARS I W ++ K
Sbjct: 361 DLLGILPHNDPLLKKCIDPMDALARSIINWAETTAK 396
>gi|356565195|ref|XP_003550829.1| PREDICTED: uncharacterized protein LOC100792806 [Glycine max]
Length = 306
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 158/321 (49%), Positives = 212/321 (66%), Gaps = 23/321 (7%)
Query: 13 LNYPSCTLGFVNSYRTLSRTRLNSNPLLAMPPSSVLLQTDESGKFQESKKSFGSKAAPFC 72
+N+P G RT +R R +N A+ L +DESG + E C
Sbjct: 1 MNHPPFLTGDAFRKRTQTRCRGRANSSTALQ-----LSSDESGNYAEP-----------C 44
Query: 73 SDALLNQANTVGIVGGASVDSTLNLLGKLV---QLSGEENDFPFLLCSDPLLNKELLSHD 129
+ +LL+Q NT+G++GG S+ STL L KL +G+E PF++ SDP L+K L
Sbjct: 45 T-SLLSQPNTIGVIGGVSLLSTLIFLEKLACWGSRNGKECP-PFVVSSDPALSKML--SL 100
Query: 130 RSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSV 189
R S + ++L+ L++ENLR KR FL+++GAR + MPCHLSH WH E+ + S+
Sbjct: 101 RGPLPSARTRFDRIKLNQDLVIENLRCKRNFLQQSGARGLAMPCHLSHAWHSEISEDSSL 160
Query: 190 PFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
PFLHV +CVA ELK A +KP+ A +RIG+L ++ A +YQE+LQ +GFEVVL DKA
Sbjct: 161 PFLHVGDCVAMELKNAKLKPIHAAGIVRIGLLTTDSNFVASYYQERLQSQGFEVVLLDKA 220
Query: 250 TMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKK 309
T EH L+PA++AL RKD+EGARNLLRIA+ VLLVRAVN V+LASDD+ +LP +DPLL+K
Sbjct: 221 TEEHVLVPAMEALYRKDIEGARNLLRIAIHVLLVRAVNLVLLASDDLLGVLPHNDPLLRK 280
Query: 310 CIDPMDALARSTIKWVKSAEK 330
CIDPMDALARSTI W ++ K
Sbjct: 281 CIDPMDALARSTIHWAETMVK 301
>gi|194693798|gb|ACF80983.1| unknown [Zea mays]
gi|413948266|gb|AFW80915.1| asp/Glu racemase isoform 1 [Zea mays]
gi|413948267|gb|AFW80916.1| asp/Glu racemase isoform 2 [Zea mays]
Length = 328
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 153/341 (44%), Positives = 209/341 (61%), Gaps = 26/341 (7%)
Query: 1 MFDRSLTVSVNTLNYPSCTLG-----FVNSYRTLSRTRLNSNPL-LAMPPSSVLLQTDES 54
M SL S+ YP C+L S R + R S+ PS ++L+TD +
Sbjct: 1 MVQMSLQRSIAV--YPRCSLSDSFHRVGGSRRRWASCRSQSSRFAYNARPSPIVLKTDHA 58
Query: 55 GKFQESK----KSFGSKAAPFCSDALLNQANTVGIVGGASVDSTLNLLGKLVQLS--GEE 108
E K S S++ P+ + + VG++G AS S L L K V S G E
Sbjct: 59 IDPPEPKDLDASSSASRSGPYI--GTCHPSGAVGVMG-ASSSSCLRFLEKFVSWSTGGGE 115
Query: 109 NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARC 168
PF++C+DPL+ KELL S S + S+ + LR+KR+FLE++GA C
Sbjct: 116 EAPPFIICNDPLVKKELLPSGTQSTSGCSA---------SIALGKLRQKRLFLEQSGACC 166
Query: 169 IVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILT 228
IVMPC H WHDE+ +GCSVPF+HV +CV KELK AN+KP+E GS +R+GVL + L
Sbjct: 167 IVMPCQFLHAWHDEISQGCSVPFIHVGDCVVKELKAANLKPVEYGSNVRVGVLFTDNKLA 226
Query: 229 AGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNT 288
Y +KL+ +GFEV+ PDKA+ME T++P++ A + D+EGARNLLR++LQVLLVRAVN+
Sbjct: 227 TNCYLDKLESQGFEVLCPDKASMERTVLPSVAAFGKGDMEGARNLLRVSLQVLLVRAVNS 286
Query: 289 VILASDDMQDLLPPDDPLLKKCIDPMDALARSTIKWVKSAE 329
+ILASDD+ +LP DDPLLKKCIDP+DAL R I ++ +
Sbjct: 287 IILASDDLVGILPDDDPLLKKCIDPLDALVREAIACARAPQ 327
>gi|242053261|ref|XP_002455776.1| hypothetical protein SORBIDRAFT_03g024890 [Sorghum bicolor]
gi|241927751|gb|EES00896.1| hypothetical protein SORBIDRAFT_03g024890 [Sorghum bicolor]
Length = 326
Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 153/334 (45%), Positives = 205/334 (61%), Gaps = 28/334 (8%)
Query: 1 MFDRSLTVSVNTLNYPSCTLG-----FVNSYRTLSRTRLNSNPLLA-MPPSSVLLQTDES 54
M SL SV YP C L S R + R S+ + PS ++L+TD +
Sbjct: 1 MVQMSLQRSVPV--YPRCCLSDSLHRVGGSRRRWASCRSQSSRFVYNARPSPIVLKTDHA 58
Query: 55 GKFQESK----KSFGSKAAPFCSDALLNQANTVGIVGGASVDSTLNLLGKLVQLS--GEE 108
E K S S++ P+ + + G++G AS S+L L K V S G E
Sbjct: 59 IDPSEPKNLDASSSASRSGPYI--GTCHPSGAAGVMG-ASSSSSLRFLEKFVSWSTRGGE 115
Query: 109 NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARC 168
PF++C+DPL+ KELL S S S+ + +R+KR+FLE++GA C
Sbjct: 116 EAPPFIICNDPLVKKELLPSGTQSTSGC-----------SIALGKIRQKRLFLEQSGACC 164
Query: 169 IVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILT 228
IVMPC H WH E+ +GCSVPFLHV +CV KELK AN+KP+E GS +R+GVL+ + L
Sbjct: 165 IVMPCQFLHAWHHEISQGCSVPFLHVGDCVVKELKAANLKPVEYGSNVRVGVLSTDNTLA 224
Query: 229 AGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNT 288
Y +KL+ +GFEV+ PDKA+ME T++P++DA + D+EGARNLLR++LQVLLVRAVN
Sbjct: 225 TNCYLDKLESQGFEVLCPDKASMERTVLPSVDAFRKGDMEGARNLLRVSLQVLLVRAVNK 284
Query: 289 VILASDDMQDLLPPDDPLLKKCIDPMDALARSTI 322
+ILASDD+ +LP DDPLLKKCIDP+DAL R I
Sbjct: 285 IILASDDLVGILPDDDPLLKKCIDPLDALVREAI 318
>gi|212721920|ref|NP_001132219.1| uncharacterized protein LOC100193653 [Zea mays]
gi|195642844|gb|ACG40890.1| asp/Glu racemase [Zea mays]
Length = 328
Score = 267 bits (683), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 153/339 (45%), Positives = 208/339 (61%), Gaps = 26/339 (7%)
Query: 1 MFDRSLTVSVNTLNYPSCTLG-----FVNSYRTLSRTRLNSNPL-LAMPPSSVLLQTDES 54
M SL S+ YP C+L S R + R S+ PS ++L+TD +
Sbjct: 1 MVQMSLQRSIAV--YPRCSLSDSFHRVGGSRRRWASCRSQSSRFAYNARPSPIVLKTDHA 58
Query: 55 GKFQESK----KSFGSKAAPFCSDALLNQANTVGIVGGASVDSTLNLLGKLVQLS--GEE 108
E K S S++ P+ + + VG++G AS S L L K V S G E
Sbjct: 59 IDPPEPKDLDASSSASRSGPYI--GTCHPSGAVGVMG-ASSSSCLRFLEKFVSWSTGGGE 115
Query: 109 NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARC 168
PF++C+DPL+ KELL S S + S+ + LR+KR+FLE++GA C
Sbjct: 116 EAPPFIICNDPLVKKELLPSGTQSTSGCSA---------SIALGKLRQKRLFLEQSGACC 166
Query: 169 IVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILT 228
IVMPC H WHDE+ +GCSVPF+HV +CV KELK AN+KP+E GS +R+GVL + L
Sbjct: 167 IVMPCQFLHAWHDEISQGCSVPFIHVGDCVVKELKAANLKPVEYGSNVRVGVLFTDNKLA 226
Query: 229 AGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNT 288
Y +KL+ +GFEV+ PDKA+ME T++P++ A + D+EGARNLLR++LQVLLVRAVN+
Sbjct: 227 TNCYLDKLESQGFEVLCPDKASMERTVLPSVAAFGKGDMEGARNLLRVSLQVLLVRAVNS 286
Query: 289 VILASDDMQDLLPPDDPLLKKCIDPMDALARSTIKWVKS 327
+ILASDD+ +LP DDPLLKKCIDP+DAL R I ++
Sbjct: 287 IILASDDLVGILPDDDPLLKKCIDPLDALVREAIACARA 325
>gi|297738924|emb|CBI28169.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 118/160 (73%), Positives = 135/160 (84%)
Query: 171 MPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAG 230
MPCHL+H WH EV KGC +PFLHV ECVA ELK+A KPLEAGS +RIGVLA L AG
Sbjct: 1 MPCHLAHAWHSEVSKGCPLPFLHVGECVASELKKAKFKPLEAGSNVRIGVLAPGETLMAG 60
Query: 231 FYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVI 290
FYQEKLQ +GFEVVLPD ATMEH ++PA++AL+RKD+EGARNLLRIA+ + L+RAVN VI
Sbjct: 61 FYQEKLQSQGFEVVLPDMATMEHIVVPAIEALHRKDMEGARNLLRIAVHIFLMRAVNIVI 120
Query: 291 LASDDMQDLLPPDDPLLKKCIDPMDALARSTIKWVKSAEK 330
LASD+MQDLLP DDPL KKCI+PMDALARSTI W KS E+
Sbjct: 121 LASDEMQDLLPRDDPLSKKCINPMDALARSTIGWAKSIEE 160
>gi|115437536|ref|NP_001043319.1| Os01g0555200 [Oryza sativa Japonica Group]
gi|57900000|dbj|BAD87936.1| unknown protein [Oryza sativa Japonica Group]
gi|113532850|dbj|BAF05233.1| Os01g0555200 [Oryza sativa Japonica Group]
gi|222618665|gb|EEE54797.1| hypothetical protein OsJ_02201 [Oryza sativa Japonica Group]
Length = 329
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 134/256 (52%), Positives = 175/256 (68%), Gaps = 15/256 (5%)
Query: 75 ALLNQANTVGIVGGASVDSTLNLLGKLVQLS---GEENDFPFLLCSDPLLNKELLSHDRS 131
A + + T+G++G S S+L L KLV S GEE PFL+C+DPLL KEL+S S
Sbjct: 81 ATTHLSGTIGVMG-ISASSSLRFLQKLVHWSTRDGEEAP-PFLVCNDPLLKKELMSSQNS 138
Query: 132 SFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPF 191
S D + + LR +R+ LEK+G CI MPC+ H +HDE+ +GCSVP
Sbjct: 139 QRPS----------DCNTALGKLRLRRLLLEKSGVCCIAMPCNTLHAYHDEISQGCSVPS 188
Query: 192 LHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATM 251
LH+ +CV KELK AN+KP+E GS + +G+L + L A Y KL+ +GFEV+LPDKA++
Sbjct: 189 LHIGDCVVKELKSANLKPVEYGSNVCVGILCTDNTLNAKCYLNKLESQGFEVLLPDKASL 248
Query: 252 EHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCI 311
EHT++PA+ A R D+EGARNLLRI+LQV+ VRAVNT+ILASDD +LP DDPLLKKCI
Sbjct: 249 EHTVLPAIGAFRRGDMEGARNLLRISLQVMFVRAVNTIILASDDFVGILPDDDPLLKKCI 308
Query: 312 DPMDALARSTIKWVKS 327
DPMDAL R TI ++
Sbjct: 309 DPMDALVRETIMCART 324
>gi|218188447|gb|EEC70874.1| hypothetical protein OsI_02398 [Oryza sativa Indica Group]
Length = 329
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 134/256 (52%), Positives = 175/256 (68%), Gaps = 15/256 (5%)
Query: 75 ALLNQANTVGIVGGASVDSTLNLLGKLVQLS---GEENDFPFLLCSDPLLNKELLSHDRS 131
A + + T+G++G S S+L L KLV S GEE PFL+C+DPLL KEL+S S
Sbjct: 81 ATTHLSGTIGVMG-ISASSSLRFLQKLVHWSTRDGEEAP-PFLVCNDPLLKKELMSSQNS 138
Query: 132 SFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPF 191
S D + + LR +R+ LEK+G CI MPC+ H +HDE+ +GCSVP
Sbjct: 139 QRPS----------DCNTALGKLRLRRLLLEKSGVCCIAMPCNTLHAYHDEISQGCSVPS 188
Query: 192 LHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATM 251
LH+ +CV KELK AN+KP+E GS + +G+L + L A Y KL+ +GFEV+LPDKA++
Sbjct: 189 LHIGDCVVKELKSANLKPVEYGSNVCVGILCTDNTLNAKCYLNKLESQGFEVLLPDKASL 248
Query: 252 EHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCI 311
EHT++PA+ A R D+EGARNLLRI+LQV+ VRAVNT+ILASDD +LP DDPLLKKCI
Sbjct: 249 EHTVLPAIGAFRRGDMEGARNLLRISLQVMFVRAVNTIILASDDFVGILPDDDPLLKKCI 308
Query: 312 DPMDALARSTIKWVKS 327
DPMDAL R TI ++
Sbjct: 309 DPMDALVRETIMCART 324
>gi|357135211|ref|XP_003569205.1| PREDICTED: uncharacterized protein LOC100831643 [Brachypodium
distachyon]
Length = 325
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 138/263 (52%), Positives = 180/263 (68%), Gaps = 18/263 (6%)
Query: 63 SFGSKAAPFCSDALLNQANTVGIVGGASVDSTLNLLGKLVQLS---GEENDFPFLLCSDP 119
S S++ P+ +A + + T+G++G S S+L L KLV S GEE PF++ +DP
Sbjct: 70 SSASRSGPY--NATSHLSGTIGVMG-TSAASSLRFLEKLVYWSTRDGEETP-PFIISNDP 125
Query: 120 LLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIW 179
L+ KEL C+ + D + + LR KR+ LE++GA CIVMPC L H W
Sbjct: 126 LVKKELF-----------CENSQLSSDCNPALGKLRHKRIVLEQSGASCIVMPCQLLHAW 174
Query: 180 HDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE 239
HDEV +GCSVPFL V CV KELK A+ KP+E GS +R+G+LA + I+T Y +KL+ +
Sbjct: 175 HDEVSQGCSVPFLDVGACVLKELKAASFKPVEYGSNVRVGILATDNIMTTNCYLDKLESQ 234
Query: 240 GFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDL 299
GFEVV PDKA+MEH ++PA+ A + D+EGARNLL+IALQ+LLVRA N +ILASDD D+
Sbjct: 235 GFEVVCPDKASMEHVVLPAVSAFRKGDMEGARNLLQIALQLLLVRAANVIILASDDFVDI 294
Query: 300 LPPDDPLLKKCIDPMDALARSTI 322
LP DDPLLKKCIDPMDAL R TI
Sbjct: 295 LPDDDPLLKKCIDPMDALVRETI 317
>gi|215695275|dbj|BAG90466.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 238
Score = 240 bits (612), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 131/243 (53%), Positives = 167/243 (68%), Gaps = 14/243 (5%)
Query: 88 GASVDSTLNLLGKLVQLS---GEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQ 144
G S S+L L KLV S GEE PFL+C+DPLL KEL+S S S
Sbjct: 2 GISASSSLRFLQKLVHWSTRDGEEAP-PFLVCNDPLLKKELMSSQNSQRPS--------- 51
Query: 145 LDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKE 204
D + + LR +R+ LEK+G CI MPC+ H +HDE+ +GCSVP LH+ +CV KELK
Sbjct: 52 -DCNTALGKLRLRRLLLEKSGVCCIAMPCNTLHAYHDEISQGCSVPSLHIGDCVVKELKS 110
Query: 205 ANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNR 264
AN+KP+E GS + +G+L + L A Y KL+ +GFEV+LPDKA++EHT++PA+ A R
Sbjct: 111 ANLKPVEYGSNVCVGILCTDNTLNAKCYLNKLESQGFEVLLPDKASLEHTVLPAIGAFRR 170
Query: 265 KDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIKW 324
D+EGARNLLRI+LQV+ VRAVNT+ILASDD +LP DDPLLKKCIDPMDAL R TI
Sbjct: 171 GDMEGARNLLRISLQVMFVRAVNTIILASDDFVGILPDDDPLLKKCIDPMDALVRETIMC 230
Query: 325 VKS 327
++
Sbjct: 231 ART 233
>gi|351722949|ref|NP_001235214.1| uncharacterized protein LOC100306705 [Glycine max]
gi|255629325|gb|ACU15007.1| unknown [Glycine max]
Length = 229
Score = 200 bits (508), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 144/218 (66%), Gaps = 17/218 (7%)
Query: 10 VNTLNYPSCTLGF-----VNSYRTLSRTRLNSNPLLAMPPSSVLLQTDESGKFQES---K 61
V +L+YP TL S R LS+TR + A PPSSV+L D SGKF E
Sbjct: 4 VMSLSYPFQTLLLGCCVTTPSRRYLSKTR--RCLVQATPPSSVILNADGSGKFSEKLHVP 61
Query: 62 KSFGSKAAPFCSDALLNQANTVGIVGGASVDSTLNLLGKLVQLSGEE--NDFPFLLCSDP 119
+ APF + Q + VGI+GG SVD+TL L KLV+ S ++ N PF+LCSDP
Sbjct: 62 NLDSGRGAPF-----VIQRSAVGIIGGVSVDATLKFLRKLVEFSSQDGVNSTPFVLCSDP 116
Query: 120 LLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIW 179
LL+KELLS++RS F S K ++LD S IV+ LR KRVFLE +G CIVMPC++SH W
Sbjct: 117 LLSKELLSYERSYFVSSTSKAENLKLDSSPIVQTLRNKRVFLENSGTSCIVMPCNVSHSW 176
Query: 180 HDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLR 217
+++V +GCSVP H++ECVAKELKEA +KPLEAGSPLR
Sbjct: 177 YEQVSEGCSVPVFHMAECVAKELKEAKLKPLEAGSPLR 214
>gi|302806146|ref|XP_002984823.1| hypothetical protein SELMODRAFT_121154 [Selaginella moellendorffii]
gi|300147409|gb|EFJ14073.1| hypothetical protein SELMODRAFT_121154 [Selaginella moellendorffii]
Length = 250
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/257 (39%), Positives = 146/257 (56%), Gaps = 37/257 (14%)
Query: 76 LLNQANTVGIVGGA--SVDSTLNLLGKLVQLSGEENDF---PFLLCSDPLLNKELLSHDR 130
LL+ ++VG++GG SV TL L +L + + E D P +LC DP + L
Sbjct: 9 LLHYPHSVGVLGGGFHSV-PTLQFLKRLREATAAEGDLLRIPLVLCGDPNASHHL----- 62
Query: 131 SSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVP 190
G +Q +R FLE AGA+CI +PC S W + G S
Sbjct: 63 ---------GALIQ------------QREFLEDAGAKCIALPCPSSLRWFTCLDSGSSAK 101
Query: 191 FLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKAT 250
L+V + + +EL A ++PL+ + RIG+L + FYQEKL+ EGFEVVLPDKA+
Sbjct: 102 LLNVVDSLVEELHRAELRPLQGAARPRIGILTCQGL---EFYQEKLEQEGFEVVLPDKAS 158
Query: 251 MEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKC 310
+ ++PA+ AL R+D +G R+L+R+A+ +LLV AVN VI DD+ L DDPLL +C
Sbjct: 159 KDRLIVPAMAALERRDFQGHRSLIRVAIHMLLVNAVNRVI--GDDLTAALWADDPLLLQC 216
Query: 311 IDPMDALARSTIKWVKS 327
IDP ++LA++T+ W K
Sbjct: 217 IDPANSLAKATVNWAKQ 233
>gi|388520181|gb|AFK48152.1| unknown [Lotus japonicus]
Length = 84
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/82 (79%), Positives = 75/82 (91%)
Query: 251 MEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKC 310
MEHT++PA++AL+RKD+EGA NL RIALQVLLVRAVN+VILASDDM+DLLP DDPLLKKC
Sbjct: 1 MEHTVMPAIEALDRKDMEGACNLFRIALQVLLVRAVNSVILASDDMRDLLPKDDPLLKKC 60
Query: 311 IDPMDALARSTIKWVKSAEKGT 332
IDPMDALA STIKW +S+E T
Sbjct: 61 IDPMDALAWSTIKWARSSEDNT 82
>gi|163856639|ref|YP_001630937.1| aspartate racemase [Bordetella petrii DSM 12804]
gi|163260367|emb|CAP42669.1| putative aspartate racemase [Bordetella petrii]
Length = 245
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 113/229 (49%), Gaps = 28/229 (12%)
Query: 107 EENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSL--IVENLRRKRVFLEKA 164
++ P LL +DP + DRS +GG +D L +VE LR FL A
Sbjct: 36 DQQHIPTLLRNDPRIP------DRSDA---RMRGG----EDPLPYMVEGLR----FLHAA 78
Query: 165 GARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKN 224
GAR I +PC+ +H+W+D++C +P LH+ + VA++L+ + + RIG++
Sbjct: 79 GARVIAIPCNTAHLWYDQLCAATPLPILHIIDAVAQDLRRLGL------AHGRIGLMGTP 132
Query: 225 AILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVR 284
A L G YQ +L+ G++ ++PD +E + + A+ D+ A +++L R
Sbjct: 133 ATLALGLYQTRLERHGYQCIVPDADEIERYCVAPIRAVKAGDLPAAVEPAMQGVRLLRAR 192
Query: 285 AVNTVILASDDMQDLLPPDD--PLLKKCIDPMDALARSTIK-WVKSAEK 330
+ V+L ++ +P L D +DALAR+ I W ++ E
Sbjct: 193 GADAVVLGCTELPLAIPHAQRAALGVLLTDSIDALARAAIDYWRQTPEH 241
>gi|269138277|ref|YP_003294977.1| aspartate racemase [Edwardsiella tarda EIB202]
gi|387867000|ref|YP_005698469.1| Putative aspartate racemase [Edwardsiella tarda FL6-60]
gi|267983937|gb|ACY83766.1| putative aspartate racemase [Edwardsiella tarda EIB202]
gi|304558313|gb|ADM40977.1| Putative aspartate racemase [Edwardsiella tarda FL6-60]
Length = 239
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 113/251 (45%), Gaps = 34/251 (13%)
Query: 83 VGIVGGASVDSTLNLLGKLVQL---SGEENDFPFLLCSDPLL---NKELLSHDRSSFSSL 136
+G++GG +T+++ K V S ++ P L+ S P + L+ S ++
Sbjct: 5 IGVLGGMGPAATVDMFNKFVTFTSASSDQQHIPLLISSIPDIPDRTAALMQEGHSPLPAM 64
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+ L+R LE+AGA CIV+PC+ +H W DE+ + C V L++
Sbjct: 65 R--------------DYLQR----LEQAGAECIVIPCNTAHFWFDELRQSCHVELLNIV- 105
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
EA + + A IG+LA NA L G YQ+ ++ G + PD+ E +
Sbjct: 106 -------EATLNEVCASGQHHIGLLATNATLYMGLYQQAIEAHGLRCIAPDREGQEQVM- 157
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLL-KKCIDPMD 315
++ AL D E AR L+ L R ++L ++ +L ++ I+
Sbjct: 158 ESIYALKAGDAEHARRLMERQADALFARGAQIIVLGCTEVPVILAEAQRAQPERYIESTG 217
Query: 316 ALARSTIKWVK 326
AL R+ I+W +
Sbjct: 218 ALVRAGIRWYE 228
>gi|417836338|ref|ZP_12482656.1| putative aspartate racemase [Escherichia coli O104:H4 str.
01-09591]
gi|422997526|ref|ZP_16988283.1| aspartate racemase [Escherichia coli O104:H4 str. 09-7901]
gi|423002599|ref|ZP_16993345.1| aspartate racemase [Escherichia coli O104:H4 str. 04-8351]
gi|340731013|gb|EGR60272.1| putative aspartate racemase [Escherichia coli O104:H4 str.
01-09591]
gi|354871675|gb|EHF32072.1| aspartate racemase [Escherichia coli O104:H4 str. 04-8351]
gi|354878092|gb|EHF38449.1| aspartate racemase [Escherichia coli O104:H4 str. 09-7901]
Length = 239
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 117/254 (46%), Gaps = 38/254 (14%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLL---NKELLSHDRSSFSSL 136
+G++GG +T++L K V + + D P ++ S P + L+ H RS F
Sbjct: 5 IGVLGGMGPAATVDLFNKFVTFTAAQCDQEHIPLIISSIPDIPDRTDALMHHGRSPFP-- 62
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
++ + K LE AGA CIV+PC+ +H W E+ C + L + E
Sbjct: 63 -------------VMRDYMHK---LEDAGAECIVIPCNTAHYWFKELKDACHIDILSIVE 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
E++ A RIG+LA NA L G YQ+ ++ GF V PD A + ++
Sbjct: 107 TTINEVR--------ACGKTRIGLLATNATLYMGLYQKGIESLGFTCVSPD-ADGQKKVM 157
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLP---PDDPLLKKCIDP 313
++ +L ++ A+ L+ ++L R ++L ++ +L + P + ID
Sbjct: 158 ESIYSLKAGNIAHAQKLMNEQAEILFSRGAEILVLGCTEIPVILAQAVKEQP--SRYIDS 215
Query: 314 MDALARSTIKWVKS 327
+L R+ IKW ++
Sbjct: 216 TASLVRAGIKWYEN 229
>gi|365108369|ref|ZP_09336270.1| aspartate racemase [Citrobacter freundii 4_7_47CFAA]
gi|363640725|gb|EHL80175.1| aspartate racemase [Citrobacter freundii 4_7_47CFAA]
Length = 239
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 113/253 (44%), Gaps = 38/253 (15%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLL---NKELLSHDRSSFSSL 136
+G++GG +T++L K V + + D P ++ S P + L+ H S ++
Sbjct: 5 IGVLGGMGPAATVDLFNKFVTFTAAQRDQEHIPLIISSIPDIPDRTDALMHHGHSPLPAM 64
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
R LE AGA CIV+PC+ +H W +E+ + C L + E
Sbjct: 65 ------------------RDYMHKLEDAGAECIVIPCNTAHFWFNELKECCHTELLSIVE 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
E+K RIG+LA NA L G YQ+ ++ G + PD + E ++
Sbjct: 107 TTMNEVKNCGKS--------RIGLLATNATLYMGLYQKGIESLGLTCISPDSSDQE-KVM 157
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK---KCIDP 313
++ L D++ A+ L+ +VL R ++L ++ +L D + K K ID
Sbjct: 158 ESIYCLKAGDLKRAQTLMNEQAEVLFSRGAQIIVLGCTEVPVILA--DAVRKSPDKYIDS 215
Query: 314 MDALARSTIKWVK 326
+L R+ IKW +
Sbjct: 216 TGSLVRAGIKWYE 228
>gi|451967009|ref|ZP_21920256.1| putative aspartate racemase [Edwardsiella tarda NBRC 105688]
gi|451314162|dbj|GAC65618.1| putative aspartate racemase [Edwardsiella tarda NBRC 105688]
Length = 239
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 111/251 (44%), Gaps = 34/251 (13%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLL---NKELLSHDRSSFSSL 136
+G++GG +T +L K + S +D P L+ S P + L+ RS +
Sbjct: 5 IGVLGGMGPAATADLFNKFITFSNARSDQQHIPLLISSIPDIPDRTAALMQSGRSPLPEM 64
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+ L+R LE+AGA CIV+PC+ +H W E+ + C V L++
Sbjct: 65 --------------CDYLQR----LEQAGAECIVIPCNTAHFWFKELRQSCHVELLNIV- 105
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
EA M+ + A +IG+LA +A L G YQ+ ++ G + PDK E +
Sbjct: 106 -------EATMEEVCASGQQKIGLLATDATLYMGLYQQAIEARGLCCIRPDKPGQEQVM- 157
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPD-DPLLKKCIDPMD 315
++ AL D AR ++ L R ++L ++ +L + I+
Sbjct: 158 ASIYALKAGDAARARAMMEQQAAALFARGAQLIVLGCTEVPVILAEAMKAQPSRYIESTG 217
Query: 316 ALARSTIKWVK 326
AL R+ I+W +
Sbjct: 218 ALVRAGIRWYE 228
>gi|397166366|ref|ZP_10489811.1| aspartate racemase family protein [Enterobacter radicincitans DSM
16656]
gi|396092121|gb|EJI89686.1| aspartate racemase family protein [Enterobacter radicincitans DSM
16656]
Length = 253
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 114/245 (46%), Gaps = 31/245 (12%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLL---NKELLSHDRSSFSSL 136
+G++GG +TL+ KL+Q + ++D P ++ + P + K L S L
Sbjct: 10 LGVLGGMGPLATLDFQHKLLQATPADSDQQQLPSVVWNVPQIADRQKALAGLGPSPLPQL 69
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
++ + + L +AGA I +PC+ +H W+DE+ + + P LH+ +
Sbjct: 70 --------------LQGIEK----LNQAGASHIAIPCNTAHHWYDELSRASNAPLLHIVD 111
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
L AN+ A P R+GV+A L AG+YQ++L +G EV+LP+ ++ +
Sbjct: 112 ATMASL--ANL----AHKPQRVGVIATQGTLDAGWYQQRLTQQGIEVLLPNDDELQQWFV 165
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD-PLLKKCIDPMD 315
P A+ R + LL LL R +ILA ++ L P L + DP
Sbjct: 166 PGCYAVKRGALHEGGELLAKQANALLERGAQQLILACTEVPVALEAIAVPFLAQTCDPSQ 225
Query: 316 ALARS 320
ALA+
Sbjct: 226 ALAQQ 230
>gi|294635246|ref|ZP_06713748.1| putative aspartate racemase [Edwardsiella tarda ATCC 23685]
gi|291091363|gb|EFE23924.1| putative aspartate racemase [Edwardsiella tarda ATCC 23685]
Length = 316
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 112/251 (44%), Gaps = 34/251 (13%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLL---NKELLSHDRSSFSSL 136
+G++GG +T +L K + S +D P L+ S P + L+ RS +
Sbjct: 82 IGVLGGMGPAATADLFNKFITFSNARSDQQHIPLLISSIPDIPDRTAALMQSGRSPLPEM 141
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+ L+R LE+AGA CIV+PC+ +H W E+ + C V L++
Sbjct: 142 --------------CDYLQR----LEQAGAECIVIPCNTAHFWFKELRQSCHVELLNIV- 182
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
EA M+ + A +IG+LA +A L G YQ+ ++ G + PDK E ++
Sbjct: 183 -------EATMEEVCASGQQKIGLLATDATLYMGLYQQAIEARGLCCIRPDKPGQEQ-VM 234
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPD-DPLLKKCIDPMD 315
++ AL D AR ++ L R ++L ++ +L + I+
Sbjct: 235 ASIYALKAGDAARARAMMEQQAAALFARGAQLIVLGCTEVPVILAEAMKAQPSRYIESTG 294
Query: 316 ALARSTIKWVK 326
AL R+ I+W +
Sbjct: 295 ALVRAGIRWYE 305
>gi|395230557|ref|ZP_10408861.1| aspartate racemase [Citrobacter sp. A1]
gi|424731382|ref|ZP_18159966.1| aspartate racemase [Citrobacter sp. L17]
gi|394715942|gb|EJF21727.1| aspartate racemase [Citrobacter sp. A1]
gi|422894033|gb|EKU33848.1| aspartate racemase [Citrobacter sp. L17]
Length = 239
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 112/256 (43%), Gaps = 44/256 (17%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLL---NKELLSHDRSSFSSL 136
+G++GG +T++L K V + + D P ++ S P + L+ H S ++
Sbjct: 5 IGVLGGMGPAATVDLFNKFVTFTAAQRDQEHIPLIISSIPDIPDRTDALMHHGHSPLPAM 64
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
R LE AGA CIV+PC+ +H W +E+ + C L + E
Sbjct: 65 ------------------RDYMHKLEDAGAECIVIPCNTAHFWFNELKECCHTELLSIVE 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
E+K RIG+LA NA L G YQ+ ++ G V PD + E ++
Sbjct: 107 TTMNEVKNCGKS--------RIGLLATNATLYMGLYQKGIESLGLTCVSPDSSGQE-KVM 157
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLP------PDDPLLKKC 310
++ L D++ A+ L+ ++L R ++L ++ +L PD K
Sbjct: 158 DSIYCLKAGDLKRAQTLMNEQAEMLFSRGAEVIVLGCTEVPVILANAVKNSPD-----KY 212
Query: 311 IDPMDALARSTIKWVK 326
ID +L R+ IKW +
Sbjct: 213 IDSTGSLVRAGIKWYE 228
>gi|407468617|ref|YP_006784941.1| aspartate racemase [Escherichia coli O104:H4 str. 2009EL-2071]
gi|407482652|ref|YP_006779801.1| aspartate racemase [Escherichia coli O104:H4 str. 2011C-3493]
gi|410483206|ref|YP_006770752.1| aspartate racemase [Escherichia coli O104:H4 str. 2009EL-2050]
gi|417711822|ref|ZP_12360818.1| aspartate racemase [Shigella flexneri K-272]
gi|417715885|ref|ZP_12364818.1| aspartate racemase [Shigella flexneri K-227]
gi|417808808|ref|ZP_12455561.1| putative aspartate racemase [Escherichia coli O104:H4 str.
LB226692]
gi|417865084|ref|ZP_12510129.1| hypothetical protein C22711_2016 [Escherichia coli O104:H4 str.
C227-11]
gi|419147285|ref|ZP_13691975.1| aspartate racemase family protein [Escherichia coli DEC6B]
gi|419163370|ref|ZP_13707842.1| aspartate racemase family protein [Escherichia coli DEC6E]
gi|422991872|ref|ZP_16982643.1| aspartate racemase [Escherichia coli O104:H4 str. C227-11]
gi|422993821|ref|ZP_16984585.1| aspartate racemase [Escherichia coli O104:H4 str. C236-11]
gi|423009136|ref|ZP_16999874.1| aspartate racemase [Escherichia coli O104:H4 str. 11-3677]
gi|423023327|ref|ZP_17014030.1| aspartate racemase [Escherichia coli O104:H4 str. 11-4404]
gi|423028477|ref|ZP_17019170.1| aspartate racemase [Escherichia coli O104:H4 str. 11-4522]
gi|423029342|ref|ZP_17020030.1| aspartate racemase [Escherichia coli O104:H4 str. 11-4623]
gi|423037181|ref|ZP_17027855.1| aspartate racemase [Escherichia coli O104:H4 str. 11-4632 C1]
gi|423042296|ref|ZP_17032963.1| aspartate racemase [Escherichia coli O104:H4 str. 11-4632 C2]
gi|423048988|ref|ZP_17039645.1| aspartate racemase [Escherichia coli O104:H4 str. 11-4632 C3]
gi|423052568|ref|ZP_17041376.1| aspartate racemase [Escherichia coli O104:H4 str. 11-4632 C4]
gi|423059535|ref|ZP_17048331.1| aspartate racemase [Escherichia coli O104:H4 str. 11-4632 C5]
gi|429723379|ref|ZP_19258263.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-9450]
gi|429771244|ref|ZP_19303268.1| aspartate racemase [Escherichia coli O104:H4 str. 11-02030]
gi|429776454|ref|ZP_19308434.1| aspartate racemase [Escherichia coli O104:H4 str. 11-02033-1]
gi|429781677|ref|ZP_19313604.1| aspartate racemase [Escherichia coli O104:H4 str. 11-02092]
gi|429786872|ref|ZP_19318763.1| aspartate racemase [Escherichia coli O104:H4 str. 11-02093]
gi|429792050|ref|ZP_19323902.1| aspartate racemase [Escherichia coli O104:H4 str. 11-02281]
gi|429797263|ref|ZP_19329068.1| aspartate racemase [Escherichia coli O104:H4 str. 11-02318]
gi|429802469|ref|ZP_19334230.1| aspartate racemase [Escherichia coli O104:H4 str. 11-02913]
gi|429807676|ref|ZP_19339399.1| aspartate racemase [Escherichia coli O104:H4 str. 11-03439]
gi|429812891|ref|ZP_19344571.1| aspartate racemase [Escherichia coli O104:H4 str. 11-04080]
gi|429818098|ref|ZP_19349734.1| aspartate racemase [Escherichia coli O104:H4 str. 11-03943]
gi|429907721|ref|ZP_19373689.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-9990]
gi|429911925|ref|ZP_19377881.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-9941]
gi|429917767|ref|ZP_19383707.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-4984]
gi|429922807|ref|ZP_19388728.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-5604]
gi|429923657|ref|ZP_19389573.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-4986]
gi|429932551|ref|ZP_19398445.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-4987]
gi|429934154|ref|ZP_19400044.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-4988]
gi|429939815|ref|ZP_19405689.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-5603]
gi|429947454|ref|ZP_19413309.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-6006]
gi|429950089|ref|ZP_19415937.1| aspartate racemase [Escherichia coli O104:H4 str. Ec12-0465]
gi|429958360|ref|ZP_19424189.1| aspartate racemase [Escherichia coli O104:H4 str. Ec12-0466]
gi|432434806|ref|ZP_19677212.1| aspartate racemase [Escherichia coli KTE188]
gi|432526711|ref|ZP_19763814.1| aspartate racemase [Escherichia coli KTE230]
gi|432967143|ref|ZP_20156059.1| aspartate racemase [Escherichia coli KTE203]
gi|433215653|ref|ZP_20399161.1| aspartate racemase [Escherichia coli KTE99]
gi|433327250|ref|ZP_20403725.1| aspartate racemase [Escherichia coli J96]
gi|333008508|gb|EGK27978.1| aspartate racemase [Shigella flexneri K-272]
gi|333020629|gb|EGK39889.1| aspartate racemase [Shigella flexneri K-227]
gi|340736616|gb|EGR71043.1| putative aspartate racemase [Escherichia coli O104:H4 str.
LB226692]
gi|341918373|gb|EGT67987.1| hypothetical protein C22711_2016 [Escherichia coli O104:H4 str.
C227-11]
gi|354857105|gb|EHF17561.1| aspartate racemase [Escherichia coli O104:H4 str. C227-11]
gi|354864896|gb|EHF25325.1| aspartate racemase [Escherichia coli O104:H4 str. C236-11]
gi|354877425|gb|EHF37784.1| aspartate racemase [Escherichia coli O104:H4 str. 11-4404]
gi|354882958|gb|EHF43280.1| aspartate racemase [Escherichia coli O104:H4 str. 11-3677]
gi|354883305|gb|EHF43626.1| aspartate racemase [Escherichia coli O104:H4 str. 11-4522]
gi|354899259|gb|EHF59408.1| aspartate racemase [Escherichia coli O104:H4 str. 11-4632 C1]
gi|354901082|gb|EHF61210.1| aspartate racemase [Escherichia coli O104:H4 str. 11-4623]
gi|354903220|gb|EHF63329.1| aspartate racemase [Escherichia coli O104:H4 str. 11-4632 C2]
gi|354904930|gb|EHF65015.1| aspartate racemase [Escherichia coli O104:H4 str. 11-4632 C3]
gi|354916155|gb|EHF76129.1| aspartate racemase [Escherichia coli O104:H4 str. 11-4632 C5]
gi|354921319|gb|EHF81244.1| aspartate racemase [Escherichia coli O104:H4 str. 11-4632 C4]
gi|377999941|gb|EHV63016.1| aspartate racemase family protein [Escherichia coli DEC6B]
gi|378014565|gb|EHV77467.1| aspartate racemase family protein [Escherichia coli DEC6E]
gi|406778368|gb|AFS57792.1| aspartate racemase [Escherichia coli O104:H4 str. 2009EL-2050]
gi|407054949|gb|AFS75000.1| aspartate racemase [Escherichia coli O104:H4 str. 2011C-3493]
gi|407064652|gb|AFS85699.1| aspartate racemase [Escherichia coli O104:H4 str. 2009EL-2071]
gi|429359172|gb|EKY95837.1| aspartate racemase [Escherichia coli O104:H4 str. 11-02092]
gi|429361503|gb|EKY98157.1| aspartate racemase [Escherichia coli O104:H4 str. 11-02030]
gi|429363074|gb|EKY99717.1| aspartate racemase [Escherichia coli O104:H4 str. 11-02033-1]
gi|429373421|gb|EKZ09965.1| aspartate racemase [Escherichia coli O104:H4 str. 11-02093]
gi|429377161|gb|EKZ13685.1| aspartate racemase [Escherichia coli O104:H4 str. 11-02281]
gi|429378765|gb|EKZ15272.1| aspartate racemase [Escherichia coli O104:H4 str. 11-02318]
gi|429389913|gb|EKZ26329.1| aspartate racemase [Escherichia coli O104:H4 str. 11-02913]
gi|429393169|gb|EKZ29566.1| aspartate racemase [Escherichia coli O104:H4 str. 11-03439]
gi|429393752|gb|EKZ30139.1| aspartate racemase [Escherichia coli O104:H4 str. 11-03943]
gi|429395812|gb|EKZ32175.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-9450]
gi|429397883|gb|EKZ34229.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-9990]
gi|429403738|gb|EKZ40019.1| aspartate racemase [Escherichia coli O104:H4 str. 11-04080]
gi|429408844|gb|EKZ45078.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-4984]
gi|429418079|gb|EKZ54226.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-4987]
gi|429421749|gb|EKZ57870.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-4988]
gi|429423489|gb|EKZ59597.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-4986]
gi|429425560|gb|EKZ61649.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-5603]
gi|429433043|gb|EKZ69078.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-5604]
gi|429442555|gb|EKZ78511.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-6006]
gi|429448376|gb|EKZ84290.1| aspartate racemase [Escherichia coli O104:H4 str. Ec12-0466]
gi|429452510|gb|EKZ88392.1| aspartate racemase [Escherichia coli O104:H4 str. Ec12-0465]
gi|429454510|gb|EKZ90369.1| aspartate racemase [Escherichia coli O104:H4 str. Ec11-9941]
gi|430967927|gb|ELC85178.1| aspartate racemase [Escherichia coli KTE188]
gi|431046281|gb|ELD56396.1| aspartate racemase [Escherichia coli KTE230]
gi|431473115|gb|ELH52949.1| aspartate racemase [Escherichia coli KTE203]
gi|431727682|gb|ELJ91423.1| aspartate racemase [Escherichia coli KTE99]
gi|432345006|gb|ELL39549.1| aspartate racemase [Escherichia coli J96]
Length = 239
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 116/254 (45%), Gaps = 38/254 (14%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLL---NKELLSHDRSSFSSL 136
+G++GG +T++L K V + + D P ++ S P + L+ H RS
Sbjct: 5 IGVLGGMGPAATVDLFNKFVTFTAAQCDQEHIPLIISSIPDIPDRTDALMHHGRSPLP-- 62
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
++ + K LE AGA CIV+PC+ +H W E+ C + L + E
Sbjct: 63 -------------VMRDYMHK---LEDAGAECIVIPCNTAHYWFKELKDACHIDILSIVE 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
E++ A RIG+LA NA L G YQ+ ++ GF V PD A + ++
Sbjct: 107 TTINEVR--------ACGKTRIGLLATNATLYMGLYQKGIESLGFTCVSPD-ADGQKKVM 157
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLP---PDDPLLKKCIDP 313
++ +L ++ A+ L+ ++L R ++L ++ +L + P + ID
Sbjct: 158 ESIYSLKAGNIAHAQKLMNEQAEILFSRGAEILVLGCTEIPVILAQAVKEQP--SRYIDS 215
Query: 314 MDALARSTIKWVKS 327
+L R+ IKW ++
Sbjct: 216 TASLVRAGIKWYEN 229
>gi|422022845|ref|ZP_16369351.1| aspartate racemase [Providencia sneebia DSM 19967]
gi|414094575|gb|EKT56239.1| aspartate racemase [Providencia sneebia DSM 19967]
Length = 242
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 120/259 (46%), Gaps = 48/259 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLL---NKELLSHDRSSFSSL 136
+G++GG +T++L K V + D P ++ S P + + LL+H +S
Sbjct: 5 IGVLGGMGPAATVDLFNKFVTYTVANKDQEHIPLIISSIPDIPDRTEALLNHGKSPLP-- 62
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
L+ + L++ LE AGA CIV+PC+ +H W +E+ + C V L++ E
Sbjct: 63 ------------LMTDYLKK----LENAGAECIVIPCNTAHFWFNELKEACHVDILNIVE 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTL- 255
E+ K IG+LA NA ++ G YQ+ ++ + + PDKA+ E +
Sbjct: 107 TTMNEVLATKKK--------NIGLLATNATMSMGLYQKNIESKHLNCITPDKASQEQVMK 158
Query: 256 -IPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLP------PDDPLLK 308
I L + N+K A +++ +L + ++L ++ +L PD
Sbjct: 159 SIYLLKSGNKK---MAERIMKEQANLLFQKGAEVIVLGCTEVPVILENETREYPD----- 210
Query: 309 KCIDPMDALARSTIKWVKS 327
K ID +L R++I W ++
Sbjct: 211 KYIDSTSSLVRASIHWYEN 229
>gi|238918933|ref|YP_002932447.1| aspartate racemase, putative [Edwardsiella ictaluri 93-146]
gi|238868501|gb|ACR68212.1| aspartate racemase, putative [Edwardsiella ictaluri 93-146]
Length = 239
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 113/253 (44%), Gaps = 38/253 (15%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLL---NKELLSHDRSSFSSL 136
+G++GG +T+++ K V + D P L+ S P + + L+ S ++
Sbjct: 5 IGVLGGMGPAATVDMFNKFVTFTSARRDQQHIPLLISSIPDIPDRSAALMQEGHSPLPAM 64
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+ L+R LE+AGA CIV+PC+ +H W DE+ + C V L++
Sbjct: 65 R--------------DYLQR----LEQAGAECIVIPCNTAHFWFDELRQSCHVELLNIVG 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
E+ + + IG+LA +A L G YQ+ ++ G + PD+ E +
Sbjct: 107 ATLNEVCASGQR--------HIGLLATDATLYMGLYQQAIEAHGLRCIAPDRGGQEQVM- 157
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPP---DDPLLKKCIDP 313
++ AL D AR L+ L R ++L ++ +L + P ++ I+
Sbjct: 158 ESIYALKAGDAGHARRLMARQADALFARGAQIIVLGCTEVPVILAKALREQP--ERYIES 215
Query: 314 MDALARSTIKWVK 326
AL R+ I+W +
Sbjct: 216 TGALVRAGIRWYE 228
>gi|421846527|ref|ZP_16279674.1| aspartate racemase [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|411772121|gb|EKS55759.1| aspartate racemase [Citrobacter freundii ATCC 8090 = MTCC 1658]
Length = 239
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 112/256 (43%), Gaps = 44/256 (17%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLL---NKELLSHDRSSFSSL 136
+G++GG +T++L K V + + D P ++ S P + L+ H S ++
Sbjct: 5 IGVLGGMGPAATVDLFNKFVTFTAAQRDQEHIPLIISSIPDIPDRTDALMHHGHSPLPAM 64
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
R LE AGA CIV+PC+ +H W +E+ + C L + E
Sbjct: 65 ------------------RDYMHKLEDAGAECIVIPCNTAHFWFNELKECCHTELLSIVE 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
E+K RIG+LA NA L G YQ+ ++ G V PD + E ++
Sbjct: 107 TTMDEVKNCGKS--------RIGLLATNATLYMGLYQKGIESLGLTCVSPDSSGQE-KVM 157
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLP------PDDPLLKKC 310
++ L D++ A+ L+ ++L R ++L ++ +L PD K
Sbjct: 158 DSIYCLKAGDLKRAQTLMNEQAEMLFSRGAEVIVLGCTEVPVILANAVKNSPD-----KY 212
Query: 311 IDPMDALARSTIKWVK 326
ID +L R+ IKW +
Sbjct: 213 IDSTGSLVRAGIKWYE 228
>gi|420373839|ref|ZP_14873902.1| aspartate racemase family protein [Shigella flexneri 1235-66]
gi|391316862|gb|EIQ74247.1| aspartate racemase family protein [Shigella flexneri 1235-66]
Length = 241
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 110/251 (43%), Gaps = 34/251 (13%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLL---NKELLSHDRSSFSSL 136
+G++GG +T++L K V + + D P ++ S P + L+ H S ++
Sbjct: 5 IGVLGGMGPAATVDLFNKFVTFTAVQRDQEHIPLIISSIPDIPDRTDALMHHGNSPLPAM 64
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
R LE AGA CIV+PC+ +H W E+ + C L + E
Sbjct: 65 ------------------RDYMHKLEDAGAECIVIPCNTAHFWFKELKECCHTELLSIVE 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
E++ RIG+LA NA L G YQ+ ++ G V PD A E ++
Sbjct: 107 TTISEVRNCGKS--------RIGLLATNATLYMGLYQKGIESLGLTCVSPDPAGQE-KVM 157
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLL-KKCIDPMD 315
++ L DV+ A+ L+ + L R ++L ++ +L + +K ID
Sbjct: 158 ESIYCLKAGDVKRAQTLMNEQAEALFSRGAQVIVLGCTEVPVILAEAVKMSPEKYIDSTG 217
Query: 316 ALARSTIKWVK 326
+L R+ IKW +
Sbjct: 218 SLVRAGIKWYE 228
>gi|419039954|ref|ZP_13586989.1| aspartate racemase family protein [Escherichia coli DEC2E]
gi|419263462|ref|ZP_13805867.1| aspartate racemase family protein [Escherichia coli DEC10B]
gi|377892696|gb|EHU57138.1| aspartate racemase family protein [Escherichia coli DEC2E]
gi|378102248|gb|EHW63927.1| aspartate racemase family protein [Escherichia coli DEC10B]
Length = 239
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 114/252 (45%), Gaps = 34/252 (13%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLL---NKELLSHDRSSFSSL 136
+G++GG +T++L K V + + D P ++ S P + L+ H RS
Sbjct: 5 IGVLGGMGPAATVDLFNKFVTFTAAQCDQEHIPLIISSIPDIPDRTDALMHHGRSPLP-- 62
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
++ + K LE AGA CIV+PC+ +H W E+ C + L + E
Sbjct: 63 -------------VMRDYMHK---LEDAGAECIVIPCNTAHYWFKELKDACHIDILSIVE 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
E++ A RIG+LA NA L G YQ+ ++ GF V PD A + ++
Sbjct: 107 TTINEVR--------ACGKTRIGLLATNATLYMGLYQKGIESLGFTCVSPD-ADGQKKVM 157
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPD-DPLLKKCIDPMD 315
++ +L ++ A+ L+ ++L R ++L ++ +L + ID
Sbjct: 158 ESIYSLKAGNIAHAQKLMNEQAEILFSRGAEILVLGCTEIPVILAQAVKEQTSRYIDSTA 217
Query: 316 ALARSTIKWVKS 327
+L R+ IKW ++
Sbjct: 218 SLVRAGIKWYEN 229
>gi|455644521|gb|EMF23621.1| aspartate racemase [Citrobacter freundii GTC 09479]
Length = 239
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 111/256 (43%), Gaps = 44/256 (17%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLL---NKELLSHDRSSFSSL 136
+G++GG +T++L K V + + D P ++ S P + L+ H S ++
Sbjct: 5 IGVLGGMGPAATVDLFNKFVTFTAAQRDQEHIPLIISSIPDIPDRTDALMHHGHSPLPAM 64
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
R LE AGA CIV+PC+ +H W +E+ + C L + E
Sbjct: 65 ------------------RDYMHKLEDAGAECIVIPCNTAHFWFNELKECCHTELLSIVE 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
E+K RIG+LA NA L G YQ+ ++ G V PD + E ++
Sbjct: 107 TTMDEVKNCGKS--------RIGLLATNATLYMGLYQKGIESLGLTCVSPDSSGQE-KVM 157
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLP------PDDPLLKKC 310
++ L D + A+ L+ ++L R ++L ++ +L PD K
Sbjct: 158 DSIYCLKAGDFKRAQTLMNEQAEMLFSRGAEVIVLGCTEVPVILANAVKNSPD-----KY 212
Query: 311 IDPMDALARSTIKWVK 326
ID +L R+ IKW +
Sbjct: 213 IDSTGSLVRAGIKWYE 228
>gi|317492681|ref|ZP_07951108.1| aspartate racemase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316919431|gb|EFV40763.1| aspartate racemase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 245
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 114/251 (45%), Gaps = 29/251 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQL---SGEENDFPFLLCSDPLLNKELLSHDRSSFSSLN 137
+T+GI+GG +T ++L K V+ ++ P + CS P D S+
Sbjct: 3 HTIGILGGMGPAATADMLNKFVRFRHAGQDQQHIPIIACSIP---------DIPDRSACL 53
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
GG D L R LE AGA CIV+PC+ +H W D + +++ +
Sbjct: 54 LSGGPSPYD------YLERYLHMLETAGAECIVIPCNTAHYWFDRLQHSAHAEMINILDA 107
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIP 257
EL A+ +G+LA +A L G YQ KL +G + +P+ + ++
Sbjct: 108 TLAELPHASQT---------VGLLATDATLATGLYQHKLDQQGRTLCVPE-GDGQSAVMQ 157
Query: 258 ALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLL-PPDDPLLKKCIDPMDA 316
A+ A D+ +++LL ++ L+ R + +I+ ++ ++ +D ID A
Sbjct: 158 AIYAYKAGDIALSQSLLFPQVEALMTRGADIIIMGCTEIPLIIGAEEDRFNCGFIDSTAA 217
Query: 317 LARSTIKWVKS 327
L R+ I+W ++
Sbjct: 218 LVRAAIRWYEA 228
>gi|161504935|ref|YP_001572047.1| hypothetical protein SARI_03065 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:- str. RSK2980]
gi|160866282|gb|ABX22905.1| hypothetical protein SARI_03065 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 244
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 118/251 (47%), Gaps = 29/251 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQL---SGEENDFPFLLCSDPLLNKELLSHDRSSFSSLN 137
+T+GI+GG +T ++L K V+L S ++ P ++ S P + DR+++
Sbjct: 3 HTIGILGGMGPAATADMLEKFVELRHASCDQQHIPLIVSSIPDIP------DRTAYL--- 53
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
GG L R LE AGA CIV+PC+ +H W D++ + + +
Sbjct: 54 LSGGPSPY------RYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKARMISILDA 107
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIP 257
+++ S +G+LA NA L G YQ+K Q G ++ P+ A + ++
Sbjct: 108 TLEDIPP---------SARHVGLLATNATLATGLYQKKAQAHGLTLIQPEDAG-QALVMQ 157
Query: 258 ALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPP-DDPLLKKCIDPMDA 316
A+ L R D A+ LL + L+ R V +I+ ++ ++ +D + ID +
Sbjct: 158 AIYTLKRGDKPAAQALLLPQIDSLVARGVQAIIMGCTEIPLIVAGYEDAVACPMIDSTAS 217
Query: 317 LARSTIKWVKS 327
L R+ I+W +S
Sbjct: 218 LVRAAIRWYES 228
>gi|340001823|ref|YP_004732707.1| aspartate racemase [Salmonella bongori NCTC 12419]
gi|339515185|emb|CCC32969.1| putative aspartate racemase [Salmonella bongori NCTC 12419]
Length = 244
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 114/254 (44%), Gaps = 35/254 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQL---SGEENDFPFLLCSDPLLNKE---LLSHDRSSFS 134
+T+GI+GG +T ++L K V L S ++ P ++ S P + LLS S +
Sbjct: 3 HTIGILGGMGPAATADMLEKFVALRHASCDQQHIPLIVSSIPDIPDRTACLLSGGPSPY- 61
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
L R LE AGA CIV+PC+ +H W D++ V + +
Sbjct: 62 -----------------RYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKVRMISI 104
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHT 254
+ + + S R+G+LA +A L G YQ+K G ++ P+ A E
Sbjct: 105 LDATLEAIPR---------SARRVGLLATDATLATGLYQKKTLAHGLTLIQPEGAGQERV 155
Query: 255 LIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-KCIDP 313
+ A+ AL R D A+ LL + L+VR +I+ ++ ++ + + ID
Sbjct: 156 M-QAIYALKRGDKSAAQALLLPQIDSLIVRGAQAIIMGCTEIPLIVAGHESAIACPIIDS 214
Query: 314 MDALARSTIKWVKS 327
+L R+ I+W +S
Sbjct: 215 TASLVRAAIRWYES 228
>gi|170765513|ref|ZP_02900324.1| aspartate racemase [Escherichia albertii TW07627]
gi|170124659|gb|EDS93590.1| aspartate racemase [Escherichia albertii TW07627]
Length = 239
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 114/254 (44%), Gaps = 38/254 (14%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLL---NKELLSHDRSSFSSL 136
+G++GG +T++L K V + + D P ++ S P + L+ H RS
Sbjct: 5 IGVLGGMGPAATVDLFNKFVTFTAAQRDQEHIPLIISSIPNIPDRTDALMHHGRSPLP-- 62
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
++ + K LE AGA CIV+PC+ +H W E+ C + L + E
Sbjct: 63 -------------VMRDYMHK---LEDAGAECIVIPCNTAHYWFKELKDACHIDILSIVE 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
E+++ RIG+LA NA L G YQ+ ++ G + PD A + ++
Sbjct: 107 TTINEVRDCG--------KTRIGLLATNATLYMGLYQKGIESLGLTCIRPD-ADSQKKVM 157
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLL---PPDDPLLKKCIDP 313
++ +L D+ A+ L+ ++L R ++L ++ +L + P ID
Sbjct: 158 ESIYSLKAGDMTHAQQLMSEQAEILFSRGAEVLVLGCTEIPVILVQAVKERP--SHYIDS 215
Query: 314 MDALARSTIKWVKS 327
+L R+ IKW ++
Sbjct: 216 TASLVRAGIKWYEN 229
>gi|311106491|ref|YP_003979344.1| aspartate racemase family protein 2 [Achromobacter xylosoxidans A8]
gi|310761180|gb|ADP16629.1| aspartate racemase family protein 2 [Achromobacter xylosoxidans A8]
Length = 244
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 23/225 (10%)
Query: 107 EENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGA 166
++ P LL +DP + DRSS GG L + E +R FL+ AGA
Sbjct: 37 DQQHIPTLLRNDPRIP------DRSSAYM---AGGENPL--PYMQEGVR----FLQDAGA 81
Query: 167 RCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAI 226
R I +PC+ +H+W+D++ VP LH+ + V +L+ L AG RIG++ A
Sbjct: 82 RLIAIPCNTAHLWYDQIAASTGVPVLHIIQAVIDDLRRLG---LSAG---RIGLMGTAAT 135
Query: 227 LTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAV 286
L G YQ+ L+ +G++ ++PD +E + ++ A+ +E A + L R
Sbjct: 136 LKLGLYQQHLEAQGYQCIVPDDDEVERYCMGSIRAVKANRLEDAYAPAAECIARLKARGA 195
Query: 287 NTVILASDDMQDLLPPD-DPLLKKCI-DPMDALARSTIKWVKSAE 329
+ V+L ++ +P P L + D +DALAR+ I ++ E
Sbjct: 196 DAVVLGCTELPLAVPHALRPSLGVTLTDSIDALARAAIAHYQAEE 240
>gi|417701287|ref|ZP_12350415.1| aspartate racemase [Shigella flexneri K-218]
gi|333006274|gb|EGK25783.1| aspartate racemase [Shigella flexneri K-218]
Length = 239
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 115/254 (45%), Gaps = 38/254 (14%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLL---NKELLSHDRSSFSSL 136
+G++GG +T++L K V + + D P ++ S P + L+ H S
Sbjct: 5 IGVLGGMGPAATVDLFNKFVTFTAAQCDQEHIPLIISSIPDIPDRTDALMHHGCSPLP-- 62
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
++ + K LE AGA CIV+PC+ +H W E+ C + L + E
Sbjct: 63 -------------VMRDYMHK---LEDAGAECIVIPCNTAHYWFKELKDACHIDILSIVE 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
E++ A RIG+LA NA L G YQ+ ++ GF V PD A + ++
Sbjct: 107 TTINEVR--------ACGKTRIGLLATNATLYMGLYQKGIESLGFTCVSPD-ADGQKKVM 157
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLP---PDDPLLKKCIDP 313
++ +L ++ A+ L+ ++L R ++L ++ +L + P + ID
Sbjct: 158 ESIYSLKAGNIAHAQKLMNEQAEILFSRGAEILVLGCTEIPVILAQAVKEQP--SRYIDS 215
Query: 314 MDALARSTIKWVKS 327
+L R+ IKW ++
Sbjct: 216 TASLVRAGIKWYEN 229
>gi|365836247|ref|ZP_09377644.1| aspartate racemase [Hafnia alvei ATCC 51873]
gi|364564367|gb|EHM42135.1| aspartate racemase [Hafnia alvei ATCC 51873]
Length = 245
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 113/251 (45%), Gaps = 29/251 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQL---SGEENDFPFLLCSDPLLNKELLSHDRSSFSSLN 137
+T+GI+GG +T ++L K V+ ++ P + CS P D S+
Sbjct: 3 HTIGILGGMGPAATADMLNKFVRFRHAGQDQQHIPIIACSIP---------DIPDRSACL 53
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
GG D L R LE AGA CIV+PC+ +H W + + +++ +
Sbjct: 54 LSGGPSPYD------YLERYLHMLETAGAECIVIPCNTAHYWFERLQHSAHAEMINILDA 107
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIP 257
EL A+ +G+LA +A L G YQ +L +G + +P+ + ++
Sbjct: 108 TLAELPRASQT---------VGLLATDATLATGLYQRRLDQQGRGLCVPE-GDGQSAVMQ 157
Query: 258 ALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-KCIDPMDA 316
A+ A D+ ++ LL +Q L+ R + +I+ ++ ++ ++ ID A
Sbjct: 158 AIYAYKAGDIALSQALLFPQVQALITRGADIIIMGCTEIPLIIGAEETRFDCGFIDSTAA 217
Query: 317 LARSTIKWVKS 327
L R+ I+W ++
Sbjct: 218 LVRAAIRWYEA 228
>gi|211639250|emb|CAR94649.1| hypothetical protein [Escherichia coli]
Length = 229
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 111/244 (45%), Gaps = 38/244 (15%)
Query: 93 STLNLLGKLVQLSGEEND---FPFLLCSDPLL---NKELLSHDRSSFSSLNCKGGGVQLD 146
+T++L K V + + D P ++ S P + L+ H RS
Sbjct: 5 ATVDLFNKFVTFTAAQCDQEHIPLIISSIPDIPDRTDALMHHGRSPLP------------ 52
Query: 147 DSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEAN 206
++ + K LE AGA CIV+PC+ +H W E+ C + L + E E++
Sbjct: 53 ---VMRDYMHK---LEDAGAECIVIPCNTAHYWFKELKDACHIDILSIVETTINEVR--- 103
Query: 207 MKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKD 266
A RIG+LA NA L G YQ+ ++ GF V PD A + ++ ++ +L +
Sbjct: 104 -----ACGKTRIGLLATNATLYMGLYQKGIESLGFTCVSPD-ADGQKKVMESIYSLKAGN 157
Query: 267 VEGARNLLRIALQVLLVRAVNTVILASDDMQDLLP---PDDPLLKKCIDPMDALARSTIK 323
+ A+ L+ ++L R ++L ++ D+L + P + ID +L R+ IK
Sbjct: 158 IAHAQKLMNEQAEILFSRGAEILVLGCTEIPDILAQAVKEQP--SRYIDSAASLVRAGIK 215
Query: 324 WVKS 327
W ++
Sbjct: 216 WYEN 219
>gi|170683881|ref|YP_001743167.1| aspartate racemase [Escherichia coli SMS-3-5]
gi|301019514|ref|ZP_07183681.1| aspartate racemase [Escherichia coli MS 69-1]
gi|419370465|ref|ZP_13911585.1| aspartate racemase family protein [Escherichia coli DEC14A]
gi|419917444|ref|ZP_14435698.1| putative aspartate racemase [Escherichia coli KD2]
gi|422832209|ref|ZP_16880323.1| hypothetical protein ESNG_04828 [Escherichia coli B093]
gi|432815727|ref|ZP_20049511.1| aspartate racemase [Escherichia coli KTE115]
gi|450205576|ref|ZP_21893673.1| Putative aspartate racemase [Escherichia coli SEPT362]
gi|170521599|gb|ACB19777.1| aspartate racemase [Escherichia coli SMS-3-5]
gi|300399221|gb|EFJ82759.1| aspartate racemase [Escherichia coli MS 69-1]
gi|371615384|gb|EHO03793.1| hypothetical protein ESNG_04828 [Escherichia coli B093]
gi|378217850|gb|EHX78125.1| aspartate racemase family protein [Escherichia coli DEC14A]
gi|388394102|gb|EIL55419.1| putative aspartate racemase [Escherichia coli KD2]
gi|431363951|gb|ELG50495.1| aspartate racemase [Escherichia coli KTE115]
gi|449311563|gb|EMD01919.1| Putative aspartate racemase [Escherichia coli SEPT362]
Length = 239
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 112/251 (44%), Gaps = 32/251 (12%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+G++GG +T++L K V + + D P ++ S P + + + S L
Sbjct: 5 IGVLGGMGPAATVDLFNKFVTFTAAQRDQEHIPLIISSIPDIPDRTDALMHNGLSPLPV- 63
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
+R LE AGA CIV+PC+ +H W E+ C + L + +
Sbjct: 64 --------------MRDYMHKLEDAGAECIVIPCNTAHYWFKELKDACHIDILSIIDTTV 109
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
E++ RIG+LA +A L G YQ+ ++ GF + PD A + ++ ++
Sbjct: 110 DEVRVC--------GKTRIGLLATDATLYMGLYQKGIESLGFNYITPD-ADGQKNVMKSI 160
Query: 260 DALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLP---PDDPLLKKCIDPMDA 316
+L +V A+ L+ + L R +IL ++ +L D PL + ID +
Sbjct: 161 YSLKAGNVTHAQKLMEEQAENLFSRGAEILILGCTEIPIILSQAVKDQPL--RYIDSTAS 218
Query: 317 LARSTIKWVKS 327
L R+ IKW ++
Sbjct: 219 LVRAGIKWYEN 229
>gi|331655439|ref|ZP_08356434.1| aspartate racemase subfamily [Escherichia coli M718]
gi|331046871|gb|EGI18953.1| aspartate racemase subfamily [Escherichia coli M718]
Length = 239
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 112/251 (44%), Gaps = 32/251 (12%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+G++GG +T++L K V + + D P ++ S P + + + S L
Sbjct: 5 IGVLGGMGPAATVDLFNKFVTFTAAQRDQEHIPLIISSIPDIPDRTDALMHNGLSPLPV- 63
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
+R LE AGA CIV+PC+ +H W E+ C + L + +
Sbjct: 64 --------------MRDYMHKLEDAGAECIVIPCNTAHYWFTELKDACHIDILSIIDTTV 109
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
E++ RIG+LA +A L G YQ+ ++ GF + PD A + ++ ++
Sbjct: 110 DEVR--------VCGKTRIGLLATDATLYMGLYQKGIESLGFNYITPD-ADGQKNVMKSI 160
Query: 260 DALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLP---PDDPLLKKCIDPMDA 316
+L +V A+ L+ + L R +IL ++ +L D PL + ID +
Sbjct: 161 YSLKAGNVTHAQKLMEEQAENLFSRGAEILILGCTEIPIILSQAVKDQPL--RYIDSTAS 218
Query: 317 LARSTIKWVKS 327
L R+ IKW ++
Sbjct: 219 LVRAGIKWYEN 229
>gi|422009925|ref|ZP_16356907.1| aspartate racemase [Providencia rettgeri Dmel1]
gi|414092098|gb|EKT53777.1| aspartate racemase [Providencia rettgeri Dmel1]
Length = 242
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 114/254 (44%), Gaps = 38/254 (14%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLL---NKELLSHDRSSFSSL 136
+G++GG +T++L K V + D P ++ S P + + LL+H S
Sbjct: 5 IGVLGGMGPAATVDLFNKFVNYTVANRDQEHIPLIISSIPDIPDRTEALLNHGESPLP-- 62
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
L+ + L++ LE AGA CIV+PC+ +H W E+ C V L + E
Sbjct: 63 ------------LMTDYLKK----LENAGAECIVIPCNTAHYWFSELKDICHVDMLSIVE 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTL- 255
KE+ K IG+LA NA + G YQ+ ++++ + PDK + +
Sbjct: 107 TTMKEVLATKKK--------NIGLLATNATMYMGLYQKNIENKYLNCITPDKESQGKVME 158
Query: 256 -IPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPD-DPLLKKCIDP 313
I L + N+K E +++ + L R ++L ++ +L + + K ID
Sbjct: 159 SIYLLKSGNKKMAEA---IMKKQAEALFSRGAEIIVLGCTEVPVILENEINNYPDKYIDS 215
Query: 314 MDALARSTIKWVKS 327
L R++I W +S
Sbjct: 216 TSTLVRASIHWYES 229
>gi|354721952|ref|ZP_09036167.1| aspartate racemase [Enterobacter mori LMG 25706]
Length = 239
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 113/252 (44%), Gaps = 30/252 (11%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+G++GG +TL+ L +L++ + ++D P ++ + P + DR +
Sbjct: 7 LGVLGGMGPLATLDFLRRLLEATPAQSDQQQIPMVVWNVPQIA------DRQN----ALA 56
Query: 140 GGGVQLDDSLI--VENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
G G L+ VE L +AGA I +PC+ +H W+D + + S P LH+ +
Sbjct: 57 GTGPSPLPQLLHAVEKLN-------QAGASHIAIPCNTAHHWYDALSEASSAPILHIVDA 109
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIP 257
L +A+ KP R+GV+A L AG+YQE+L + EVV+P + +P
Sbjct: 110 TLDALSQADEKPQ------RVGVIATKGTLDAGWYQERLAAQAIEVVVPTPEELAEWFVP 163
Query: 258 ALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLL-PPDDPLLKKCIDPMDA 316
A+ R + LL + L R ++LA ++ L P DP A
Sbjct: 164 GCYAVKRGALVDGGELLVLQANALFARGAQKLVLACTEVPVALEAARAPFRHLTWDPAQA 223
Query: 317 LA-RSTIKWVKS 327
LA R + W S
Sbjct: 224 LAERCSQLWQTS 235
>gi|421481181|ref|ZP_15928767.1| aspartate racemase family protein 2 [Achromobacter piechaudii HLE]
gi|400200631|gb|EJO33581.1| aspartate racemase family protein 2 [Achromobacter piechaudii HLE]
Length = 247
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 110/223 (49%), Gaps = 23/223 (10%)
Query: 107 EENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGA 166
++ P LL +DP + DRSS GG L +V+ +R FLE+AGA
Sbjct: 37 DQQHIPTLLRNDPRIP------DRSSA---YMAGGESPLPH--MVDGVR----FLEQAGA 81
Query: 167 RCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAI 226
+ I +PC+ +H+W+DE+ +P LH+ + V +L+ L G RIG++ A
Sbjct: 82 QLIAIPCNTAHLWYDEIAASTGLPVLHIIQAVIDDLRRLG---LPRG---RIGLMGTAAT 135
Query: 227 LTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAV 286
L G YQ+ L+ +G+E ++PD +E + ++ A+ +E A + L R
Sbjct: 136 LKLGLYQKHLEAQGYECIVPDDDEVERYCMGSIRAVKGNQLEAAFAPAAECIARLKARGA 195
Query: 287 NTVILASDDMQDLLPPD-DPLLKKCI-DPMDALARSTIKWVKS 327
+ V+L ++ +P P L + D +DALAR+ I ++
Sbjct: 196 DAVVLGCTELPLAVPHALRPSLGVTLTDSIDALARAAIAHYEA 238
>gi|261344626|ref|ZP_05972270.1| putative aspartate racemase [Providencia rustigianii DSM 4541]
gi|282567542|gb|EFB73077.1| putative aspartate racemase [Providencia rustigianii DSM 4541]
Length = 235
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 44/256 (17%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLL---NKELLSHDRSSFSSL 136
+G++GG +T++L K V + D P ++ S P + + LL+H S
Sbjct: 5 IGVLGGMGPAATVDLFNKFVTFNHANKDQEHIPLIISSIPDIPDRTEALLNHGVSPLP-- 62
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
L+ + L+R LE AGA CIV+PC+ +H W DE+ K C V L +
Sbjct: 63 ------------LMEDYLQR----LEVAGAECIVIPCNTAHFWFDELKKSCHVEILSII- 105
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
EA M + + +IG+LA +A + G YQ+ ++ +G + PD + ++
Sbjct: 106 -------EATMNEVISTQKNKIGLLATDATMHMGLYQQSIEDQGLICIKPDNEN-QKMIM 157
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLP------PDDPLLKKC 310
++ L + A ++++ +L ++L ++ +L PD K
Sbjct: 158 KSIYLLKSGEFSLAEDIMKKQADILFSNGAEIIVLGCTEVPVILSNEVKSHPD-----KY 212
Query: 311 IDPMDALARSTIKWVK 326
ID AL R+ I W K
Sbjct: 213 IDSTGALVRAGINWYK 228
>gi|422320336|ref|ZP_16401398.1| aspartate racemase [Achromobacter xylosoxidans C54]
gi|317404913|gb|EFV85281.1| aspartate racemase [Achromobacter xylosoxidans C54]
Length = 247
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 23/218 (10%)
Query: 107 EENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGA 166
++ P LL +DP + DRSS GG L +VE +R FLE+AGA
Sbjct: 37 DQQHIPTLLRNDPRIP------DRSSAYM---AGGENPL--PYMVEGVR----FLERAGA 81
Query: 167 RCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAI 226
+ I +PC+ +H+W+D++ P LH+ + V +L+ L+ G RIG++ A
Sbjct: 82 QLIAIPCNTAHLWYDDIAAATLRPVLHIIQAVIDDLRRLG---LQQG---RIGLMGTAAT 135
Query: 227 LTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAV 286
L G YQ L+ +G+E ++PD +E + ++ A+ +E A + L R
Sbjct: 136 LKLGLYQRHLEAQGYECIVPDDDEVERYCMASIRAVKGNQLEAAFAPAADCIARLKARGA 195
Query: 287 NTVILASDDMQDLLPPD-DPLLKKCI-DPMDALARSTI 322
+ V+L ++ +P P L + D +DALAR+ I
Sbjct: 196 DAVVLGCTELPLAVPHALRPSLGITLTDSIDALARAAI 233
>gi|337280382|ref|YP_004619854.1| aspartate racemase [Ramlibacter tataouinensis TTB310]
gi|334731459|gb|AEG93835.1| aspartate racemase-like protein [Ramlibacter tataouinensis TTB310]
Length = 233
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 116/252 (46%), Gaps = 25/252 (9%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSG---EENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+G++GG +T + K++ L+ +E+ P L+ SDP + + S L
Sbjct: 2 IGVLGGMGPLATADFFRKVITLTDARRDEDHVPLLVQSDPRIPPRPAAILHGGESPLPAL 61
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G D LI AGA + MPC+ +H W+ ++ GC VPF+ + E
Sbjct: 62 LAG---RDRLI------------GAGATMLAMPCNTAHHWYAQLVSGCPVPFISIVEASC 106
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
+A + AG+ +G+LA A L A Y+ L+ G +LPD A ++ ++PA+
Sbjct: 107 ----DAAAGRVPAGA--AVGLLATRATLAARLYEPALRARGLRPMLPDDALLDTFVLPAI 160
Query: 260 DALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLP-PDDPLLKKCIDPMDALA 318
+ + ++ A +R A+ L R V+LA ++ L D L C+D LA
Sbjct: 161 EDVKAGRLDAAARQVRHAVAALSQRGAQAVVLACTELPIALQHGDTATLPACVDTTLELA 220
Query: 319 RSTIKWVKSAEK 330
R+ + ++A +
Sbjct: 221 RACVHQWQAASR 232
>gi|237732212|ref|ZP_04562693.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226907751|gb|EEH93669.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 229
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 38/243 (15%)
Query: 93 STLNLLGKLVQLSGEEND---FPFLLCSDPLL---NKELLSHDRSSFSSLNCKGGGVQLD 146
+T++L K V + + D P ++ S P + L+ H S ++
Sbjct: 5 ATVDLFNKFVTFTAAQRDQEHIPLIISSIPDIPDRTDALMHHGHSPLPAM---------- 54
Query: 147 DSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEAN 206
R LE AGA CIV+PC+ +H W +E+ + C L + E E+K
Sbjct: 55 --------RDYMHKLEDAGAECIVIPCNTAHFWFNELKECCHTELLSIVETTMNEVKNCG 106
Query: 207 MKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKD 266
RIG+LA NA L G YQ+ ++ G + PD + E ++ ++ L D
Sbjct: 107 KS--------RIGLLATNATLYMGLYQKGIESLGLTCISPDSSGQE-KVMESIYCLKAGD 157
Query: 267 VEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK---KCIDPMDALARSTIK 323
++ A+ L+ +VL R ++L ++ +L D + K K ID +L R+ IK
Sbjct: 158 LKRAQTLMNEQAEVLFSRGAQIIVLGCTEVPVILA--DAVRKSPDKYIDSTGSLVRAGIK 215
Query: 324 WVK 326
W +
Sbjct: 216 WYE 218
>gi|291085128|ref|ZP_06352145.2| putative aspartate racemase [Citrobacter youngae ATCC 29220]
gi|291072057|gb|EFE10166.1| putative aspartate racemase [Citrobacter youngae ATCC 29220]
Length = 229
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 105/243 (43%), Gaps = 38/243 (15%)
Query: 93 STLNLLGKLVQLSGEEND---FPFLLCSDPLL---NKELLSHDRSSFSSLNCKGGGVQLD 146
+T++L K V + + D P ++ S P + L+ H S ++
Sbjct: 5 ATVDLFNKFVTFTAAQRDQEHIPLIISSIPDIPDRTDALMRHGNSPLPAM---------- 54
Query: 147 DSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEAN 206
R LE AGA CIV+PC+ +H W +E+ + C L + E E+K
Sbjct: 55 --------RDYMHKLEDAGAECIVIPCNTAHFWFNELKESCHTELLSIVETTLNEVKNCG 106
Query: 207 MKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKD 266
RIG+LA NA L G YQ+ ++ G V PD ++ E ++ ++ L D
Sbjct: 107 KS--------RIGLLATNATLYMGLYQKGIESLGLTCVSPDSSSQEK-VMESIYCLKAGD 157
Query: 267 VEGARNLLRIALQVLLVRAVNTVILASDDMQDLLP---PDDPLLKKCIDPMDALARSTIK 323
++ A+ L+ + L R ++L ++ +L P K ID +L R+ IK
Sbjct: 158 IKRAQTLMNEQAEALFSRGAEVIVLGCTEVPVILAEAVKKSP--AKYIDSTGSLVRAGIK 215
Query: 324 WVK 326
W +
Sbjct: 216 WYE 218
>gi|359799349|ref|ZP_09301911.1| aspartate racemase family protein 2 [Achromobacter arsenitoxydans
SY8]
gi|359362653|gb|EHK64388.1| aspartate racemase family protein 2 [Achromobacter arsenitoxydans
SY8]
Length = 229
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 111/225 (49%), Gaps = 23/225 (10%)
Query: 105 SGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKA 164
S +++ P LL +DP + DRSS GG L +VE +R FLE+A
Sbjct: 17 SIDQHHIPTLLRNDPRIP------DRSSA---YMAGGENPL--PYMVEGVR----FLEQA 61
Query: 165 GARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKN 224
GA+ I +PC+ +H+W DE+ +P LH+ + V ++L+ L G RIG++
Sbjct: 62 GAQLIAIPCNTAHLWFDEIAASTRLPVLHIIQAVIEDLRRLG---LPRG---RIGLMGTA 115
Query: 225 AILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVR 284
A L G YQ L+ +G+E ++PD +E + ++ A+ +E A + L R
Sbjct: 116 ATLKLGLYQRHLEAQGYECIVPDDDEVERYCMGSIRAVKGNQLEDAFAPAAECIARLKAR 175
Query: 285 AVNTVILASDDMQDLLPPD-DPLLKKCI-DPMDALARSTIKWVKS 327
+ V+L ++ +P P L + D +DALAR+ I ++
Sbjct: 176 GADAVVLGCTELPLAVPHALRPSLGVTLTDSIDALARAAIAHYQA 220
>gi|90414492|ref|ZP_01222467.1| hypothetical aspartate racemase [Photobacterium profundum 3TCK]
gi|90324400|gb|EAS40962.1| hypothetical aspartate racemase [Photobacterium profundum 3TCK]
Length = 236
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 113/254 (44%), Gaps = 38/254 (14%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+GI+GG +T+ + K++ + ND P L+ ++P + DR+++ N +
Sbjct: 5 LGILGGMGPLATVEFMQKIISRTPAHNDQQHIPMLVSNNPQIP------DRTAYIISNGE 58
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
L++ L++AGA CIVMPC+ +H W+ + C+V + + + V
Sbjct: 59 DP---------YPALKQGMEQLQQAGAECIVMPCNTAHYWYTRLTNSCNVHTISIIDSVV 109
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
E K + +G+LA A + AG YQ KL + + + + ++ +
Sbjct: 110 SEAKHRRYQ--------TVGLLATTATMMAGMYQTKLAQQQINAIETTDSE-QQAIMNGI 160
Query: 260 DALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM------QDLLPPDDPLLKKCIDP 313
A+ +VE + L++ + +L R VI ++ Q + P + C+D
Sbjct: 161 YAVKAGNVEHGKQLMQPVFEAMLNRGAEAVIFGCTEIPVALAEQTISQP-----QHCLDS 215
Query: 314 MDALARSTIKWVKS 327
+D LA + W ++
Sbjct: 216 LDILAEQCVHWAQA 229
>gi|261821065|ref|YP_003259171.1| aspartate racemase [Pectobacterium wasabiae WPP163]
gi|261605078|gb|ACX87564.1| aspartate racemase [Pectobacterium wasabiae WPP163]
Length = 238
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 118/249 (47%), Gaps = 34/249 (13%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLS---GEENDFPFLLCSDPLL---NKELLSHDRSSFSSL 136
VGI+GG +T++ + KL++ + +++ P + S P + + +L H S +
Sbjct: 5 VGILGGMGPGATVDAMQKLIKNTPAYRDQDHIPMIAVSIPDIPDRTQCILQHSASPLGKM 64
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
L+ ++ LE AGA CI++PC+ +H W +E+ + C + + +
Sbjct: 65 -----------------LQYMKI-LENAGAECIIIPCNTAHYWFNELKQQCRAEMISIID 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
+ ++ AN R+G+LA A +TA YQ+ L ++ E PD+A +H ++
Sbjct: 107 VTCQAIRSANTT--------RVGLLATTATVTARIYQDNLINDNIECYTPDEAD-QHQVM 157
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPD-DPLLKKCIDPMD 315
++ A ++ GA ++L LL V +IL ++ +L + + +D +
Sbjct: 158 ESIYAYKSGNIAGAYSMLSPVKDRLLQAGVEKIILGCTELPLILEQEIKTTPQHYVDATE 217
Query: 316 ALARSTIKW 324
L + T++W
Sbjct: 218 ELIKKTVEW 226
>gi|385871263|gb|AFI89783.1| Aspartate racemase [Pectobacterium sp. SCC3193]
Length = 238
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 118/249 (47%), Gaps = 34/249 (13%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLS---GEENDFPFLLCSDPLL---NKELLSHDRSSFSSL 136
VGI+GG +T++ + KL++ + +++ P + S P + + +L H S +
Sbjct: 5 VGILGGMGPGATVDAMQKLIKNTPAYRDQDHIPMIAVSIPDIPDRTQCILQHSASPLGKM 64
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
L+ ++ LE AGA CI++PC+ +H W +E+ + C + + +
Sbjct: 65 -----------------LQYMKI-LENAGAECIIIPCNTAHYWFNELKQQCRAEMISIID 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
+ ++ AN R+G+LA A +TA YQ+ L ++ E PD+A +H ++
Sbjct: 107 VTCQAIRSANTT--------RVGLLATTATVTARIYQDNLINDNIECYTPDEAD-QHQVM 157
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPD-DPLLKKCIDPMD 315
++ A ++ GA ++L LL V +IL ++ +L + + +D +
Sbjct: 158 ESIYAYKSGNIAGAYSMLSPVKDRLLQAGVEKIILGCTELPLILEQEIKTTPQHYVDATE 217
Query: 316 ALARSTIKW 324
L + T++W
Sbjct: 218 ELIKKTVEW 226
>gi|421080749|ref|ZP_15541667.1| Aspartate racemase family protein [Pectobacterium wasabiae CFBP
3304]
gi|401704761|gb|EJS94966.1| Aspartate racemase family protein [Pectobacterium wasabiae CFBP
3304]
Length = 238
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 118/249 (47%), Gaps = 34/249 (13%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLS---GEENDFPFLLCSDPLL---NKELLSHDRSSFSSL 136
VGI+GG +T++ + KL++ + +++ P + S P + + +L H S +
Sbjct: 5 VGILGGMGPGATVDAMQKLIKNTPAYRDQDHIPMIAVSIPDIPDRTQCILQHSASPLDKM 64
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
L+ ++ LE AGA CI++PC+ +H W +E+ + C + + +
Sbjct: 65 -----------------LQYMKI-LENAGAECIIIPCNTAHYWFNELKQQCRAEMISIID 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
+ ++ AN R+G+LA A +TA YQ+ L ++ E PD+A +H ++
Sbjct: 107 VTCQAIRNANTT--------RVGLLATTATVTARIYQDNLINDDIECYTPDEAD-QHQVM 157
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPD-DPLLKKCIDPMD 315
++ A ++ GA ++L LL V +IL ++ +L + + +D +
Sbjct: 158 ESIYAYKSGNIAGAYSMLSPVKDRLLQAGVEKIILGCTELPLILEQEVKTTPQYYVDATE 217
Query: 316 ALARSTIKW 324
L + T++W
Sbjct: 218 ELIKKTVEW 226
>gi|300946728|ref|ZP_07160978.1| aspartate racemase [Escherichia coli MS 116-1]
gi|300976693|ref|ZP_07173549.1| aspartate racemase [Escherichia coli MS 200-1]
gi|15808704|gb|AAL08433.1|AF326777_8 unknown [Shigella flexneri 2a]
gi|300308501|gb|EFJ63021.1| aspartate racemase [Escherichia coli MS 200-1]
gi|300453611|gb|EFK17231.1| aspartate racemase [Escherichia coli MS 116-1]
Length = 229
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 110/244 (45%), Gaps = 38/244 (15%)
Query: 93 STLNLLGKLVQLSGEEND---FPFLLCSDPLL---NKELLSHDRSSFSSLNCKGGGVQLD 146
+T++L K V + + D P ++ S P + L+ H RS
Sbjct: 5 ATVDLFNKFVTFTAAQCDQEHIPLIISSIPDIPDRTDALMHHGRSPLP------------ 52
Query: 147 DSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEAN 206
++ + K LE AGA CIV+PC+ +H W E+ C + L + E E++
Sbjct: 53 ---VMRDYMHK---LEDAGAECIVIPCNTAHYWFKELKDACHIDILSIVETTINEVR--- 103
Query: 207 MKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKD 266
A RIG+LA NA L G YQ+ ++ GF V PD A + ++ ++ +L +
Sbjct: 104 -----ACGKTRIGLLATNATLYMGLYQKGIESLGFTCVSPD-ADGQKKVMESIYSLKAGN 157
Query: 267 VEGARNLLRIALQVLLVRAVNTVILASDDMQDLLP---PDDPLLKKCIDPMDALARSTIK 323
+ A+ L+ ++L R ++L ++ +L + P + ID +L R+ IK
Sbjct: 158 IAHAQKLMNEQAEILFSRGAEILVLGCTEIPVILAQAVKEQP--SRYIDSTASLVRAGIK 215
Query: 324 WVKS 327
W ++
Sbjct: 216 WYEN 219
>gi|170750685|ref|YP_001756945.1| aspartate racemase [Methylobacterium radiotolerans JCM 2831]
gi|170657207|gb|ACB26262.1| aspartate racemase [Methylobacterium radiotolerans JCM 2831]
Length = 250
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 119/252 (47%), Gaps = 21/252 (8%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLS--GEEND-FPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+G++GG +T++ L KLV+ + G + D P L+CS + DR+
Sbjct: 2 LGVLGGMGPMATVDFLAKLVRATPAGRDQDHIPTLVCS------AVDIPDRAD----AIL 51
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G G D L +R LE GA I +PC+ +H WH + G ++P LH+ + VA
Sbjct: 52 GAG---PDPL--PAMRAALARLEAGGATRIAIPCNTAHHWHAALQAGTALPILHIVDAVA 106
Query: 200 KELKEANMKP-LEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPA 258
+ L + + AG+ R+G+LA + L G Y+E+L G + PD + + A
Sbjct: 107 ETLARTETETGIAAGTGGRVGLLATDGTLRTGLYRERLARRGLTCLGPDP-EGQAAVAAA 165
Query: 259 LDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALA 318
+ + V AR LL ++ L + V++A ++ L DP + +D +ALA
Sbjct: 166 IRLVKAHRVAEARPLLEAQVRALAEAGCDRVVMACTEIPIALAGSDP-SGRLVDATEALA 224
Query: 319 RSTIKWVKSAEK 330
R+ + + ++
Sbjct: 225 RACVAACRPDQR 236
>gi|197251317|ref|YP_002149466.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|440762531|ref|ZP_20941588.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|440769873|ref|ZP_20948828.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
gi|440772041|ref|ZP_20950950.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|197215020|gb|ACH52417.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|436413270|gb|ELP11206.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
gi|436419954|gb|ELP17825.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|436423069|gb|ELP20888.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
Length = 244
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 113/254 (44%), Gaps = 35/254 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQL---SGEENDFPFLLCSDPLLNKE---LLSHDRSSFS 134
+T+GI+GG +T ++L K V+L S ++ P ++ S P + LLS S +
Sbjct: 3 HTIGILGGMGPAATADMLEKFVELRHASCDQQHIPLIVSSIPDIPDRTACLLSGGPSPY- 61
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
L R LE AGA CIV+PC+ +H W D++ + +
Sbjct: 62 -----------------RYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKARMISI 104
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHT 254
+ ++ S +G+LA NA L G YQ+K G ++ P+ A +
Sbjct: 105 LDATLGDIPP---------SARHVGLLATNATLATGLYQKKALARGLTLIQPEDAG-QAL 154
Query: 255 LIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-KCIDP 313
++ A+ L R D A+ LL + L+ R T+I+ ++ ++ + + ID
Sbjct: 155 VMQAIYTLKRGDKTAAQALLLPQIDSLIARGAQTIIMGCTEIPLIVAGHERAIACPMIDS 214
Query: 314 MDALARSTIKWVKS 327
+L R+ I+W +S
Sbjct: 215 TASLVRAAIRWYES 228
>gi|307130332|ref|YP_003882348.1| aspartate racemase [Dickeya dadantii 3937]
gi|306527861|gb|ADM97791.1| Probable aspartate racemase [Dickeya dadantii 3937]
Length = 256
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 113/248 (45%), Gaps = 18/248 (7%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
VG++GG +T++LL K++ + E D + + + N + + + + +
Sbjct: 10 VGVLGGMGPLATVDLLQKIIAATPAERDQQHVPVA--VWNVPQIPDRQRALAGIGASPLP 67
Query: 143 VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKEL 202
LD VE L R + +++PC+ +H W DE+ P LH+++ L
Sbjct: 68 ALLDG---VERLNRLDI-------SHLIIPCNTAHHWFDELQAASRAPVLHIADVT---L 114
Query: 203 KEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDAL 262
+A + SP R+G++A + L AG+YQ +L E VLPD+ M++ +P A+
Sbjct: 115 IQAQAALADTSSP-RVGLIATHGTLAAGWYQRRLAALDIETVLPDEQEMDNLFVPGCYAV 173
Query: 263 NRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQ-DLLPPDDPLLKKCIDPMDALARST 321
R DV L + L R +ILA ++ L L + ID +ALAR
Sbjct: 174 KRGDVAAGGGLFGQLAERLAARGATHLILACTEVAPGLAAMQSRWLARSIDSTEALARHC 233
Query: 322 IK-WVKSA 328
+ W + A
Sbjct: 234 VALWREQA 241
>gi|417441954|ref|ZP_12162261.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
gi|353611391|gb|EHC64056.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
Length = 244
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 113/254 (44%), Gaps = 35/254 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQL---SGEENDFPFLLCSDPLLNKE---LLSHDRSSFS 134
+T+GI+GG +T ++L K V+L S ++ P ++ S P + LLS S +
Sbjct: 3 HTIGILGGMGPAATADMLEKFVELRHVSCDQQHIPLIVSSIPDIPDRTACLLSGGPSPY- 61
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
L R LE AGA CIV+PC+ +H W D++ + +
Sbjct: 62 -----------------RYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKARMISI 104
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHT 254
+ E+ S +G+LA NA L G YQ+K G ++ P++A +
Sbjct: 105 LDATLGEIPP---------SARHVGLLATNATLATGLYQKKALARGLTLIQPEEAG-QAL 154
Query: 255 LIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-KCIDP 313
++ A+ L R D A+ LL + L+ R +I+ ++ ++ + + ID
Sbjct: 155 VMQAIYTLKRGDKTAAQALLLPQIDRLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDS 214
Query: 314 MDALARSTIKWVKS 327
+L R+ I+W +S
Sbjct: 215 TASLVRAAIRWYES 228
>gi|340708287|pdb|3S81|A Chain A, Crystal Structure Of Putative Aspartate Racemase From
Salmonella Typhimurium
gi|340708288|pdb|3S81|B Chain B, Crystal Structure Of Putative Aspartate Racemase From
Salmonella Typhimurium
gi|340708289|pdb|3S81|C Chain C, Crystal Structure Of Putative Aspartate Racemase From
Salmonella Typhimurium
gi|340708290|pdb|3S81|D Chain D, Crystal Structure Of Putative Aspartate Racemase From
Salmonella Typhimurium
Length = 268
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 121/275 (44%), Gaps = 38/275 (13%)
Query: 60 SKKSFGSKAAPFCSDALLNQANTVGIVGGASVDSTLNLLGKLVQL---SGEENDFPFLLC 116
S G++ F S+A+ +T+GI+GG +T ++L K V+L S ++ P ++
Sbjct: 9 SGVDLGTENLYFQSNAM---KHTIGILGGMGPAATADMLEKFVELRHASCDQQHIPLIVS 65
Query: 117 SDPLLNKE---LLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPC 173
S P + LLS S + L R LE AGA CIV+PC
Sbjct: 66 SIPDIPDRTACLLSGGPSPY------------------RYLERYLHMLEDAGAECIVIPC 107
Query: 174 HLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQ 233
+ +H W D++ + + + ++ S +G+LA NA L G YQ
Sbjct: 108 NTAHYWFDDLQNVAKARMISILDATLGDIPP---------SARHVGLLATNATLATGLYQ 158
Query: 234 EKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILAS 293
+K G ++ P+ A + ++ A+ L R D A+ LL + L+ R +I+
Sbjct: 159 KKALARGLTLIQPEDAG-QALVMQAIYTLKRGDKTAAQALLLPQIDSLIARGAQAIIMGC 217
Query: 294 DDMQDLLPPDDPLLK-KCIDPMDALARSTIKWVKS 327
++ ++ + + ID +L R+ I+W +S
Sbjct: 218 TEIPLIVAGHERAIACPMIDSTASLVRAAIRWYES 252
>gi|50120438|ref|YP_049605.1| aspartate racemase [Pectobacterium atrosepticum SCRI1043]
gi|49610964|emb|CAG74409.1| probable aspartate racemase [Pectobacterium atrosepticum SCRI1043]
Length = 238
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 116/249 (46%), Gaps = 34/249 (13%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLS---GEENDFPFLLCSDPLL---NKELLSHDRSSFSSL 136
VGI+GG +T++ + KL++ + +++ P + S P + + +L H S +
Sbjct: 5 VGILGGMGPGATVDAMQKLIKNTPAYRDQDHIPMIAVSIPDIPDRTQCILQHSASPLGKM 64
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
L+ ++ LE AGA CI++PC+ +H W +E+ + CS + + +
Sbjct: 65 -----------------LQYMKI-LENAGAECIIIPCNTAHYWFNELKQQCSAEMISIID 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
+ ++ N R+G+LA A + A YQ+ L + E PD A +H ++
Sbjct: 107 VTCQAIRNTNTT--------RVGLLATTATVKARIYQDNLITDNIECYTPDDAD-QHQVM 157
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLL-KKCIDPMD 315
++ A D+ GA ++L LL V +IL ++ +L + + + +D +
Sbjct: 158 ESIYAYKSGDIAGAYSMLSPVKDRLLQAGVEKIILGCTELPLILEQEVRISPQHYVDATE 217
Query: 316 ALARSTIKW 324
L + T++W
Sbjct: 218 ELIKKTVEW 226
>gi|186470782|ref|YP_001862100.1| aspartate racemase [Burkholderia phymatum STM815]
gi|184197091|gb|ACC75054.1| aspartate racemase [Burkholderia phymatum STM815]
Length = 233
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 125/259 (48%), Gaps = 44/259 (16%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+GI+GG +T++ + K+V+L+ D P L+ + P + DRSS N
Sbjct: 4 IGILGGMGPLATVDFMDKVVRLTEASRDQEHLPLLVANLPHIE------DRSSAILEN-- 55
Query: 140 GGGVQLDDSLI--VENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE- 196
GV +L+ ++ L R V L I +PC+ +H W+ ++C + P L+++E
Sbjct: 56 --GVDPLPALLAGIDMLNRNSVGL-------IAIPCNSAHHWYAQICAHSAAPVLNIAEI 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
CVA A R+ VLA L +GFYQ L E V PD+ T++ +
Sbjct: 107 CVAAVPPTAK----------RVAVLATGGALVSGFYQRALAERDIEPVTPDE-TVQPLVA 155
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM----QDLLPPDDPLLKKCID 312
+DA+ D++ A L AL +L+ + V +LA ++ Q + P PL+ ++
Sbjct: 156 VCIDAVKSGDLDAAAMHLETALAMLVKQGVTMALLACTEIPLAAQRIAAPALPLIDSSLE 215
Query: 313 PMDALARSTIKWVKSAEKG 331
LAR+T+K+ + E+G
Sbjct: 216 ----LARATVKY--ACERG 228
>gi|197264432|ref|ZP_03164506.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197242687|gb|EDY25307.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
Length = 244
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 35/254 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQL---SGEENDFPFLLCSDPLLNKE---LLSHDRSSFS 134
+T+GI+GG +T ++L K V+L S ++ P ++ S P + LLS S +
Sbjct: 3 HTIGILGGMGPAATADMLEKFVELRHASCDQQHIPLIVSSIPDIPDRTACLLSGGPSPY- 61
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
L R LE AGA CIV+PC+ +H W D++ + +
Sbjct: 62 -----------------RYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKARMISI 104
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHT 254
+ ++ S +G+LA NA L G YQ+K G ++ P++A +
Sbjct: 105 LDATLGDIPP---------SARHVGLLATNATLATGLYQKKALERGLTLIQPEEAG-QAL 154
Query: 255 LIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-KCIDP 313
++ A+ L R D A+ LL + L+ R +I+ ++ ++ + + ID
Sbjct: 155 VMQAIYTLKRGDKTAAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDS 214
Query: 314 MDALARSTIKWVKS 327
+L R+ I+W +S
Sbjct: 215 TASLVRAAIRWYES 228
>gi|227115199|ref|ZP_03828855.1| aspartate racemase [Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
Length = 238
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 116/251 (46%), Gaps = 38/251 (15%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLS---GEENDFPFLLCSDPLL---NKELLSHDRSSFSSL 136
VGI+GG +T++ + KL++ + +++ P + S P + K +L H S +
Sbjct: 5 VGILGGMGPGATVDAMQKLIKNTPAYRDQDHIPMIAVSIPDIPDRTKCILQHSASPLDKM 64
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
L+ ++ LE AGA CI++PC+ +H W +++ K C + + +
Sbjct: 65 -----------------LQYMKI-LENAGAECIIIPCNTAHYWFNDLKKQCRAEMISIID 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
+ +K AN R+G+LA A + A YQ+ L + E PD A +H ++
Sbjct: 107 VTCQAIKNANTT--------RVGLLATTATVKARIYQDNLTTDNIECYTPDDAD-QHQVM 157
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPD---DPLLKKCIDP 313
++ A D++ A +LL LL V +IL ++ +L + P + +D
Sbjct: 158 ESIYAYKSGDIDRAYSLLSPVKDRLLQAGVEKIILGCTELPLILEQEVKTSP--QHYVDA 215
Query: 314 MDALARSTIKW 324
+ L + T++W
Sbjct: 216 TEELIKKTVEW 226
>gi|315230092|ref|YP_004070528.1| aspartate racemase [Thermococcus barophilus MP]
gi|315183120|gb|ADT83305.1| aspartate racemase [Thermococcus barophilus MP]
Length = 230
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 121/250 (48%), Gaps = 28/250 (11%)
Query: 77 LNQANTVGIVGGASVDSTLNLLGKLV--QLSGEENDFP-FLLCSDPLLNKELLSHDRSSF 133
+ + +GI+GG +T+ L ++V + + D P ++ ++P + DR+++
Sbjct: 1 MGKEKIIGILGGMGPMATVELFKRIVLKTPAKRDQDHPRIIIYNNPKI------PDRTAY 54
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
+ +L DS K+ LE GA I+MPC+ +H + DE+ + ++P ++
Sbjct: 55 ILGKGENPLPELIDS-------AKK--LESWGADFIIMPCNTAHFFADEIQRAINIPLIN 105
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ E A+ +K+ +K R+G+LA + +G YQ L+ +G +V++P+K E+
Sbjct: 106 MIEETAEYVKQLGIK--------RVGLLATTGTVVSGIYQRALEKKGIKVIIPNKEEQEN 157
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDP 313
+ + + E R LL + + L + +I ++ L P+D L IDP
Sbjct: 158 VMRGIYEGIKANKFEFGRELL-LEIAKKLEKESEGIIAGCTEVSVALKPED-LEVPLIDP 215
Query: 314 MDALARSTIK 323
MD +A +K
Sbjct: 216 MDVIAEKAVK 225
>gi|423143009|ref|ZP_17130647.1| aspartate racemase [Salmonella enterica subsp. houtenae str. ATCC
BAA-1581]
gi|379049600|gb|EHY67495.1| aspartate racemase [Salmonella enterica subsp. houtenae str. ATCC
BAA-1581]
Length = 244
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 114/254 (44%), Gaps = 35/254 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQL---SGEENDFPFLLCSDPLLNKE---LLSHDRSSFS 134
+T+GI+GG +T ++L K V+L S ++ P ++ S P + LLS S +
Sbjct: 3 HTIGILGGMGPAATADMLEKFVELRHASCDQQHIPLIVSSIPDIPDRTACLLSGGPSPY- 61
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
L R LE AGA CIV+PC+ +H W D++ + +
Sbjct: 62 -----------------RYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKARMISI 104
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHT 254
+ +++ S IG+LA NA L G YQ+K G ++ P++A +
Sbjct: 105 LDATLEDIPP---------SARHIGLLATNATLATGLYQKKALAHGLTLIQPEEAG-QAL 154
Query: 255 LIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-KCIDP 313
++ A+ A R D A+ LL + L+ R +I+ ++ ++ + + ID
Sbjct: 155 VMQAIYARKRGDKPAAQALLLPQIDRLIARGAQAIIMGCTEIPLIVAEHEGAIACPMIDS 214
Query: 314 MDALARSTIKWVKS 327
+L R+ I+W +S
Sbjct: 215 TASLVRAAIRWYES 228
>gi|332286031|ref|YP_004417942.1| aspartate/glutamate racemase [Pusillimonas sp. T7-7]
gi|330429984|gb|AEC21318.1| putative aspartate/glutamate racemase [Pusillimonas sp. T7-7]
Length = 240
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 113/251 (45%), Gaps = 26/251 (10%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+G++GG ++ + +L L+ +D P +L SDP + H +
Sbjct: 11 LGVLGGMGPMASAVFMVRLTALTDAASDQHHVPTMLWSDPRIPDRPAGHAGTGTDPFPWM 70
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
GV+ +E+AGA I +PC+ +H+W+D++ S+ LH+ V
Sbjct: 71 LNGVR---------------HMERAGAGVIAIPCNTAHLWYDKLAASTSLTVLHIVRSVV 115
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
+L+ +K RIG+L L++G YQ +L+ +G+E VL + + A+
Sbjct: 116 VDLQRNGIK------RGRIGLLGTATTLSSGLYQRELEAQGYECVLLEHNDLLRYCAEAI 169
Query: 260 DALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLP-PDDPLLK-KCIDPMDAL 317
+ + A +Q+L + V+ V+L ++ LP P P L ID +DAL
Sbjct: 170 RLVKVNQADAALEPAVQCVQLLRQQGVDAVVLGCTELALALPAPARPSLGVAVIDSIDAL 229
Query: 318 ARSTIKWVKSA 328
A + + W + A
Sbjct: 230 ALAALDWYQDA 240
>gi|422014636|ref|ZP_16361246.1| aspartate racemase [Providencia burhodogranariea DSM 19968]
gi|414100856|gb|EKT62467.1| aspartate racemase [Providencia burhodogranariea DSM 19968]
Length = 246
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 91/181 (50%), Gaps = 14/181 (7%)
Query: 150 IVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKP 209
++E+LR LE AG CI+MPC+ +H W++E+ K S+PF+ + + ++ + N+K
Sbjct: 64 MIESLR----ILESAGVSCIIMPCNTAHYWYEELKKSVSIPFISIIDSACNKIIKENIK- 118
Query: 210 LEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEG 269
+ +LA A + AG YQ KL + ++PD ++ ++ ++ A D
Sbjct: 119 -------SVALLATTATIEAGLYQHKLAENNIKCLIPDDIE-QYKIMKSIIAYKAGDFHS 170
Query: 270 ARNLLRIALQVLLVRAVNTVILASDDMQDLLPP-DDPLLKKCIDPMDALARSTIKWVKSA 328
A+ ++ + L + +N ++ ++ +L +K ID D L + TI W + A
Sbjct: 171 AQEIMLSCVSKLEEKGINKFVMGCTEIPLILKNISRQYPEKFIDATDELIKETINWYQFA 230
Query: 329 E 329
+
Sbjct: 231 D 231
>gi|168234643|ref|ZP_02659701.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194735758|ref|YP_002117430.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|204926710|ref|ZP_03217912.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|375004454|ref|ZP_09728789.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Infantis str. SARB27]
gi|416506318|ref|ZP_11734536.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|416519817|ref|ZP_11740084.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|416526065|ref|ZP_11742119.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|416534638|ref|ZP_11747126.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|416555228|ref|ZP_11758713.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|416563986|ref|ZP_11763046.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|416569208|ref|ZP_11765396.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|417354709|ref|ZP_12131067.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
gi|417362422|ref|ZP_12136078.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|417387669|ref|ZP_12152037.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|417393092|ref|ZP_12155705.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|417471785|ref|ZP_12167682.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|417535904|ref|ZP_12189232.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|422006405|ref|ZP_16353429.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Senftenberg str. A4-543]
gi|194711260|gb|ACF90481.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197291651|gb|EDY31001.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|204323375|gb|EDZ08570.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|353073792|gb|EHB39557.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Infantis str. SARB27]
gi|353560953|gb|EHC28029.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
gi|353581513|gb|EHC42425.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|353599683|gb|EHC55793.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|353609824|gb|EHC63007.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|353621966|gb|EHC71651.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|353630590|gb|EHC78097.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Senftenberg str. A4-543]
gi|353655597|gb|EHC96565.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|363554916|gb|EHL39148.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|363557099|gb|EHL41308.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|363558130|gb|EHL42323.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|363560045|gb|EHL44192.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|363566744|gb|EHL50757.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|363571530|gb|EHL55441.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|363577215|gb|EHL61041.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
Length = 244
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 112/254 (44%), Gaps = 35/254 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQL---SGEENDFPFLLCSDPLLNKE---LLSHDRSSFS 134
+T+GI+GG +T ++L K V+L S ++ P ++ S P + LLS S F
Sbjct: 3 HTIGILGGMGPAATADMLEKFVELRHASCDQQHIPLIVSSIPDIPDRTACLLSGGPSPF- 61
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
L R LE AGA CIV+PC+ +H W D++ + +
Sbjct: 62 -----------------RYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKARMISI 104
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHT 254
+ ++ S +G+LA NA L G YQ+K G ++ P+ A +
Sbjct: 105 LDATLGDIPP---------SARHVGLLATNATLATGLYQKKALARGLTLIQPEDAG-QAL 154
Query: 255 LIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-KCIDP 313
++ A+ L R D A+ LL + L+ R +I+ ++ ++ + + ID
Sbjct: 155 VMQAIYTLKRGDKTAAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDS 214
Query: 314 MDALARSTIKWVKS 327
+L R+ I+W +S
Sbjct: 215 TASLVRAAIRWYES 228
>gi|296536291|ref|ZP_06898405.1| aspartate racemase [Roseomonas cervicalis ATCC 49957]
gi|296263380|gb|EFH09891.1| aspartate racemase [Roseomonas cervicalis ATCC 49957]
Length = 235
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 114/254 (44%), Gaps = 26/254 (10%)
Query: 77 LNQANTVGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSF 133
++ A +G++GG ++ + +L L+ E D P LL SDP + DR++
Sbjct: 1 MSGAPFLGVLGGMGPLASAQFMLRLTLLTPAERDQDHLPALLWSDPRIP------DRTAA 54
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
GG +D L L R LE AG I +PC+ +H W++ + +P LH
Sbjct: 55 ---RLAGG----EDPL--PWLLRGIAGLEAAGCGAIAIPCNTAHGWYEAMQAATPLPILH 105
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + A++L + + R+G+LA L YQ +L+ G+ V+ PD+A M
Sbjct: 106 IVDAAAEDLARQGV------ASGRVGLLATAGTLAMRLYQPRLEARGYSVITPDEAEMRE 159
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLP--PDDPLLKKCI 311
+ P + + V A L A L R V+L ++ + P + +
Sbjct: 160 LVSPGIALVKANRVAEAYAPLAEAATRLKARGAAAVVLGCTEIPLGIQAGPSAEIGLPLV 219
Query: 312 DPMDALARSTIKWV 325
D +DALA ++++W
Sbjct: 220 DTIDALALASLRWA 233
>gi|253687770|ref|YP_003016960.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum
PC1]
gi|251754348|gb|ACT12424.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum
PC1]
Length = 238
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 113/251 (45%), Gaps = 38/251 (15%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLS---GEENDFPFLLCSDPLL---NKELLSHDRSSFSSL 136
VGI+GG +T++ + KL++ + +++ P + S P + K +L H S
Sbjct: 5 VGILGGMGPGATVDAMQKLIKNTPAYRDQDHIPMIAVSIPDIPDRTKCILQHSASPL--- 61
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
E + + LE AGA CI++PC+ +H W +E+ + C + + +
Sbjct: 62 ---------------EKMLQYMKILENAGAECIIIPCNTAHYWFNELKQQCRAEMISIID 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
+ +K AN R+G+LA A + A YQ+ L + E P+ A +H ++
Sbjct: 107 VTCQAIKHANTT--------RVGLLATTATVKARIYQDNLITDNIECFTPNDAD-QHQVM 157
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPD---DPLLKKCIDP 313
++ A D+ GA +L LL V +IL ++ +L + P + +D
Sbjct: 158 ESIYAYKSGDIAGAYRMLSPVKDRLLHAGVEKIILGCTELPLILEQEVKTSP--QHYVDA 215
Query: 314 MDALARSTIKW 324
+ L + T++W
Sbjct: 216 TEELIKKTVEW 226
>gi|62182935|ref|YP_219352.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|161617810|ref|YP_001591776.1| hypothetical protein SPAB_05674 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|168464587|ref|ZP_02698490.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|194442279|ref|YP_002043753.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|198244578|ref|YP_002218382.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|200389289|ref|ZP_03215901.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|224586336|ref|YP_002640135.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|375117293|ref|ZP_09762463.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|375121922|ref|ZP_09767089.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|418762335|ref|ZP_13318464.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
gi|418767478|ref|ZP_13323542.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|418770646|ref|ZP_13326667.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|418775112|ref|ZP_13331072.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
gi|418778758|ref|ZP_13334666.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|418785188|ref|ZP_13341021.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
gi|418787419|ref|ZP_13343220.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
gi|418792941|ref|ZP_13348677.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|418796330|ref|ZP_13352022.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|418802922|ref|ZP_13358547.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
gi|418808119|ref|ZP_13363676.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|418811852|ref|ZP_13367377.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|418816602|ref|ZP_13372094.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21538]
gi|418822191|ref|ZP_13377604.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22425]
gi|418832969|ref|ZP_13387902.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|418834104|ref|ZP_13389015.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|418841468|ref|ZP_13396287.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|418843862|ref|ZP_13398657.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
gi|418848716|ref|ZP_13403454.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|418852907|ref|ZP_13407603.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|418859220|ref|ZP_13413825.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|418864342|ref|ZP_13418872.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
gi|418869143|ref|ZP_13423583.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
gi|419789967|ref|ZP_14315643.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|419794858|ref|ZP_14320466.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|445139302|ref|ZP_21384179.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
gi|445153096|ref|ZP_21391228.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
gi|62130568|gb|AAX68271.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|161367174|gb|ABX70942.1| hypothetical protein SPAB_05674 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194400942|gb|ACF61164.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|195632992|gb|EDX51446.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|197939094|gb|ACH76427.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|199606387|gb|EDZ04932.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|224470864|gb|ACN48694.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|322717439|gb|EFZ09010.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|326626189|gb|EGE32534.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|392614125|gb|EIW96576.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|392614391|gb|EIW96838.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|392734770|gb|EIZ91951.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|392736371|gb|EIZ93534.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
gi|392737240|gb|EIZ94401.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|392748910|gb|EJA05889.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
gi|392752285|gb|EJA09226.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
gi|392754965|gb|EJA11880.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|392765676|gb|EJA22460.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
gi|392765971|gb|EJA22754.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|392771199|gb|EJA27920.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|392776319|gb|EJA33007.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
gi|392777947|gb|EJA34629.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|392778420|gb|EJA35100.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|392787866|gb|EJA44404.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22425]
gi|392789963|gb|EJA46465.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21538]
gi|392796438|gb|EJA52770.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|392806012|gb|EJA62127.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|392808797|gb|EJA64845.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|392815911|gb|EJA71842.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
gi|392823016|gb|EJA78820.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|392828150|gb|EJA83847.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|392830388|gb|EJA86037.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|392830868|gb|EJA86511.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
gi|392836865|gb|EJA92441.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
gi|444853415|gb|ELX78486.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
gi|444853936|gb|ELX79002.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
Length = 244
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 35/254 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQL---SGEENDFPFLLCSDPLLNKE---LLSHDRSSFS 134
+T+GI+GG +T ++L K V+L S ++ P ++ S P + LLS S +
Sbjct: 3 HTIGILGGMGPAATADMLEKFVELRHASCDQQHIPLIVSSIPDIPDRTACLLSGGPSPY- 61
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
L R LE AGA CIV+PC+ +H W D++ + +
Sbjct: 62 -----------------RYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKARMISI 104
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHT 254
+ ++ S +G+LA NA L G YQ+K G ++ P++A +
Sbjct: 105 LDATLGDIPP---------SARHVGLLATNATLATGLYQKKALARGLTLIQPEEAG-QAL 154
Query: 255 LIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-KCIDP 313
++ A+ L R D A+ LL + L+ R +I+ ++ ++ + + ID
Sbjct: 155 VMQAIYTLKRGDKTAAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDS 214
Query: 314 MDALARSTIKWVKS 327
+L R+ I+W +S
Sbjct: 215 TASLVRAAIRWYES 228
>gi|168262443|ref|ZP_02684416.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|205348837|gb|EDZ35468.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
Length = 244
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 35/254 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQL---SGEENDFPFLLCSDPLLNKE---LLSHDRSSFS 134
+T+GI+GG +T ++L K V+L S ++ P ++ S P + LLS S +
Sbjct: 3 HTIGILGGMGPAATADMLEKFVELRHASCDQQHIPLIVSSIPDIPDRTACLLSGGPSPY- 61
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
L R LE AGA CIV+PC+ +H W D++ + +
Sbjct: 62 -----------------RYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKARMISI 104
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHT 254
+ ++ S +G+LA NA L G YQ+K G ++ P++A +
Sbjct: 105 LDATLGDIPP---------SARYVGLLATNATLATGLYQKKALARGLTLIQPEEAG-QAL 154
Query: 255 LIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-KCIDP 313
++ A+ L R D A+ LL + L+ R +I+ ++ ++ + + ID
Sbjct: 155 VMQAIYTLKRGDKTAAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDS 214
Query: 314 MDALARSTIKWVKS 327
+L R+ I+W +S
Sbjct: 215 TASLVRAAIRWYES 228
>gi|337279037|ref|YP_004618508.1| aspartate racemase [Ramlibacter tataouinensis TTB310]
gi|334730113|gb|AEG92489.1| aspartate racemase-like protein [Ramlibacter tataouinensis TTB310]
Length = 245
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 104/209 (49%), Gaps = 30/209 (14%)
Query: 100 KLVQLS--GEEND-FPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSL--IVENL 154
+LV L+ G + D P LLC+DP + DRSS + L Q +D L ++ L
Sbjct: 28 RLVALTPAGRDQDHVPALLCNDPRIP------DRSS-ARLG------QGEDPLQAMLAGL 74
Query: 155 RRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGS 214
R LE+AGA I +PC+ +H+W++++ + VP LH+ E V +L+ L A
Sbjct: 75 R----LLERAGASLIAIPCNTAHLWYEQMARRTRVPLLHIVEAVCDDLER-----LGARD 125
Query: 215 PLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLL 274
P IG++ A L G YQE L+ G+EV++PD+ + + A+ A+ A
Sbjct: 126 P--IGLMGTPATLKLGLYQEPLRARGYEVIVPDELGLAQC-VAAIAAVKANRPAEAFEPA 182
Query: 275 RIALQVLLVRAVNTVILASDDMQDLLPPD 303
++ L+ R V+L ++ +P D
Sbjct: 183 AACIRALVARGARAVVLGCTELPLAVPHD 211
>gi|423017595|ref|ZP_17008316.1| aspartate racemase family protein 2 [Achromobacter xylosoxidans
AXX-A]
gi|338779340|gb|EGP43786.1| aspartate racemase family protein 2 [Achromobacter xylosoxidans
AXX-A]
Length = 229
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 21/196 (10%)
Query: 106 GEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAG 165
++ P LL +DP + DRSS GG L +VE +R FLE+AG
Sbjct: 18 ADQQHIPTLLRNDPRIP------DRSSAY---MAGGENPL--PYMVEGVR----FLERAG 62
Query: 166 ARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNA 225
A+ I +PC+ +H+W+D++ P LH+ + V +L+ L G RIG++ A
Sbjct: 63 AQLIAIPCNTAHLWYDDIAAATERPVLHIIQAVIDDLRRLG---LHQG---RIGLMGTAA 116
Query: 226 ILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRA 285
L G YQ L+ +G+E ++PD +E + ++ A+ +E A + L R
Sbjct: 117 TLKLGLYQRHLEAQGYECIVPDDDEVERYCMASIRAVKGNQLEAAFAPAAECIARLKARG 176
Query: 286 VNTVILASDDMQDLLP 301
+ V+L ++ +P
Sbjct: 177 ADAVVLGCTELPLAVP 192
>gi|16767754|ref|NP_463369.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|56416294|ref|YP_153369.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|167551230|ref|ZP_02344985.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|167991305|ref|ZP_02572404.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168232862|ref|ZP_02657920.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|168243994|ref|ZP_02668926.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|194451334|ref|YP_002048531.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194469149|ref|ZP_03075133.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|197365218|ref|YP_002144855.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|238910673|ref|ZP_04654510.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|374982563|ref|ZP_09723884.1| Aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|378447817|ref|YP_005235449.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|378453484|ref|YP_005240844.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|378702344|ref|YP_005184302.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|378987178|ref|YP_005250334.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|378991772|ref|YP_005254936.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|379703751|ref|YP_005245479.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|383499069|ref|YP_005399758.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|386589803|ref|YP_006086203.1| Aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|417345877|ref|ZP_12125892.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|417370285|ref|ZP_12141202.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|417377778|ref|ZP_12146601.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|417494838|ref|ZP_12173401.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|417515337|ref|ZP_12178905.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
gi|417543629|ref|ZP_12194753.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
gi|418513029|ref|ZP_13079263.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
gi|419731747|ref|ZP_14258656.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|419733265|ref|ZP_14260165.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|419741159|ref|ZP_14267867.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|419742225|ref|ZP_14268902.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|419748637|ref|ZP_14275130.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|421572154|ref|ZP_16017813.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|421576643|ref|ZP_16022237.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|421581367|ref|ZP_16026913.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|421583956|ref|ZP_16029472.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|421886360|ref|ZP_16317534.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|422028752|ref|ZP_16375047.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|422033806|ref|ZP_16379867.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|427557956|ref|ZP_18930372.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|427576024|ref|ZP_18934960.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|427597655|ref|ZP_18939880.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|427622039|ref|ZP_18944762.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|427646259|ref|ZP_18949649.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|427658760|ref|ZP_18954364.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|427664046|ref|ZP_18959279.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|427682155|ref|ZP_18964166.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|427802274|ref|ZP_18969699.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
gi|437826226|ref|ZP_20843916.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|16423076|gb|AAL23328.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|56130551|gb|AAV80057.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|194409638|gb|ACF69857.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194455513|gb|EDX44352.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|197096695|emb|CAR62317.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|205323833|gb|EDZ11672.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|205330368|gb|EDZ17132.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205333029|gb|EDZ19793.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|205337028|gb|EDZ23792.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|261249596|emb|CBG27465.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267996863|gb|ACY91748.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301160993|emb|CBW20529.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312915607|dbj|BAJ39581.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|321222517|gb|EFX47589.1| Aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|323132850|gb|ADX20280.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|332991319|gb|AEF10302.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|353582151|gb|EHC42889.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|353588871|gb|EHC47804.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|353628761|gb|EHC76719.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|353655561|gb|EHC96541.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
gi|353656364|gb|EHC97133.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
gi|357952401|gb|EHJ79345.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|366082594|gb|EHN46526.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
gi|379983756|emb|CCF89807.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|380465890|gb|AFD61293.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|381290774|gb|EIC32030.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|381292639|gb|EIC33822.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|381300626|gb|EIC41685.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|381313491|gb|EIC54274.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|381314649|gb|EIC55417.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|383796847|gb|AFH43929.1| Aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|402517603|gb|EJW25001.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|402517893|gb|EJW25288.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|402518392|gb|EJW25776.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|402531857|gb|EJW39062.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|414011053|gb|EKS95031.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|414011801|gb|EKS95745.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|414012179|gb|EKS96108.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|414026230|gb|EKT09507.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|414026972|gb|EKT10227.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|414029456|gb|EKT12615.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|414040317|gb|EKT22944.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|414041092|gb|EKT23679.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|414045515|gb|EKT27905.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|414054567|gb|EKT36509.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|414059104|gb|EKT40712.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
gi|435305205|gb|ELO80741.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
Length = 244
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 35/254 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQL---SGEENDFPFLLCSDPLLNKE---LLSHDRSSFS 134
+T+GI+GG +T ++L K V+L S ++ P ++ S P + LLS S +
Sbjct: 3 HTIGILGGMGPAATADMLEKFVELRHASCDQQHIPLIVSSIPDIPDRTACLLSGGPSPY- 61
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
L R LE AGA CIV+PC+ +H W D++ + +
Sbjct: 62 -----------------RYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKARMISI 104
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHT 254
+ ++ S +G+LA NA L G YQ+K G ++ P+ A +
Sbjct: 105 LDATLGDIPP---------SARHVGLLATNATLATGLYQKKALARGLTLIQPEDAG-QAL 154
Query: 255 LIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-KCIDP 313
++ A+ L R D A+ LL + L+ R +I+ ++ ++ + + ID
Sbjct: 155 VMQAIYTLKRGDKTAAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDS 214
Query: 314 MDALARSTIKWVKS 327
+L R+ I+W +S
Sbjct: 215 TASLVRAAIRWYES 228
>gi|213052215|ref|ZP_03345093.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E00-7866]
Length = 246
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 35/254 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQL---SGEENDFPFLLCSDPLLNKE---LLSHDRSSFS 134
+T+GI+GG +T ++L K V+L S ++ P ++ S P + LLS S +
Sbjct: 5 HTIGILGGMGPAATADMLEKFVELRHVSCDQQHIPLIVSSIPDIPDRTACLLSGGPSPY- 63
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
L R LE AGA CIV+PC+ +H W D++ + +
Sbjct: 64 -----------------RYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKARMISI 106
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHT 254
+ ++ S +G+LA NA L G YQ+K G ++ P+ A +
Sbjct: 107 LDATLGDIPP---------SARHVGLLATNATLATGLYQKKALARGLTLIQPEDAG-QAL 156
Query: 255 LIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-KCIDP 313
++ A+ L R D A+ LL + L+ R +I+ ++ ++ + + ID
Sbjct: 157 VMQAIYTLKRGDKTAAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDS 216
Query: 314 MDALARSTIKWVKS 327
+L R+ I+W +S
Sbjct: 217 TASLVRAAIRWYES 230
>gi|168821040|ref|ZP_02833040.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|409248761|ref|YP_006884600.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|205342298|gb|EDZ29062.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|320084589|emb|CBY94380.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
Length = 244
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 35/254 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQL---SGEENDFPFLLCSDPLLNKE---LLSHDRSSFS 134
+T+GI+GG +T ++L K V+L S ++ P ++ S P + LLS S +
Sbjct: 3 HTIGILGGMGPAATADMLEKFVELRHASCDQQHIPLIVSSIPDIPDRTACLLSGGPSPY- 61
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
L R LE AGA CIV+PC+ +H W D++ + +
Sbjct: 62 -----------------RYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKARMISI 104
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHT 254
+ ++ S +G+LA NA L G YQ+K G ++ P+ A +
Sbjct: 105 LDATLGDIPP---------SARHVGLLATNATLATGLYQKKALARGLTLIQPEDAG-QAL 154
Query: 255 LIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-KCIDP 313
++ A+ L R D A+ LL + L+ R +I+ ++ ++ + + ID
Sbjct: 155 VMQAIYTLKRGDKTAAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDS 214
Query: 314 MDALARSTIKWVKS 327
+L R+ I+W +S
Sbjct: 215 TASLVRAAIRWYES 228
>gi|16763318|ref|NP_458935.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. CT18]
gi|29144796|ref|NP_808138.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|213428375|ref|ZP_03361125.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E02-1180]
gi|213581046|ref|ZP_03362872.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-0664]
gi|213609708|ref|ZP_03369534.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-2068]
gi|289825451|ref|ZP_06544682.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-3139]
gi|378962738|ref|YP_005220224.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. P-stx-12]
gi|25512393|pir||AD1067 probable aspartate racemase [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16505627|emb|CAD03355.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29140435|gb|AAO71998.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|374356610|gb|AEZ48371.1| Aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. P-stx-12]
Length = 244
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 35/254 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQL---SGEENDFPFLLCSDPLLNKE---LLSHDRSSFS 134
+T+GI+GG +T ++L K V+L S ++ P ++ S P + LLS S +
Sbjct: 3 HTIGILGGMGPAATADMLEKFVELRHVSCDQQHIPLIVSSIPDIPDRTACLLSGGPSPY- 61
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
L R LE AGA CIV+PC+ +H W D++ + +
Sbjct: 62 -----------------RYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKARMISI 104
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHT 254
+ ++ S +G+LA NA L G YQ+K G ++ P+ A +
Sbjct: 105 LDATLGDIPP---------SARHVGLLATNATLATGLYQKKALARGLTLIQPEDAG-QAL 154
Query: 255 LIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-KCIDP 313
++ A+ L R D A+ LL + L+ R +I+ ++ ++ + + ID
Sbjct: 155 VMQAIYTLKRGDKTAAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDS 214
Query: 314 MDALARSTIKWVKS 327
+L R+ I+W +S
Sbjct: 215 TASLVRAAIRWYES 228
>gi|365882291|ref|ZP_09421543.1| Aspartate racemase [Bradyrhizobium sp. ORS 375]
gi|365289405|emb|CCD94074.1| Aspartate racemase [Bradyrhizobium sp. ORS 375]
Length = 236
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 116/248 (46%), Gaps = 32/248 (12%)
Query: 83 VGIVGGASVDSTLNLLGKLVQ---LSGEENDFPFLLCSD---PLLNKELLSHDRSSFSSL 136
+G++GG +T++ +GK+++ + +++ ++CS P +L R ++
Sbjct: 3 LGVLGGMGPMATVDFMGKVIRNTPAACDQDHIEMVVCSATSVPDRTAAILDQGRDPLPAM 62
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
++ L R LE++GA CI +PC+ +H WH + VP LH+
Sbjct: 63 --------------LDALDR----LERSGATCIAIPCNTAHHWHGALQARTRVPILHI-- 102
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
V + L+ + IGVLA + + AG YQ +L G+ +PD A + ++
Sbjct: 103 -VDALADALAARGLKGTT---IGVLATDGTVRAGIYQRRLAKRGYACAMPDGAG-QAEVM 157
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQ-DLLPPDDPLLKKCIDPMD 315
A+ + DV+ A +L Q L+ + + V +A ++ L L ++ +DP D
Sbjct: 158 RAIRLVKAGDVDAATTILSRQAQALVAKGCSHVAMACTEIPLALAAVQGELKQRMLDPTD 217
Query: 316 ALARSTIK 323
LA++ ++
Sbjct: 218 ILAQACVR 225
>gi|416423641|ref|ZP_11691030.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|416433321|ref|ZP_11696847.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|416441986|ref|ZP_11702073.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|416447001|ref|ZP_11705513.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|416455190|ref|ZP_11710815.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|416457981|ref|ZP_11712583.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|416465286|ref|ZP_11716758.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|416482014|ref|ZP_11723540.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|416487164|ref|ZP_11725474.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|416495963|ref|ZP_11728870.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|416543594|ref|ZP_11752376.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|416580499|ref|ZP_11771890.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|416587883|ref|ZP_11776419.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|416592293|ref|ZP_11779114.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|416600253|ref|ZP_11784200.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|416607727|ref|ZP_11788798.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|416615472|ref|ZP_11793384.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|416621202|ref|ZP_11796221.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|416633729|ref|ZP_11802117.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|416644041|ref|ZP_11806424.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|416646240|ref|ZP_11807506.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|416655857|ref|ZP_11812833.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|416669279|ref|ZP_11819245.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|416683573|ref|ZP_11824413.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|416694263|ref|ZP_11827076.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|416708368|ref|ZP_11833230.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|416710214|ref|ZP_11834319.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|416717645|ref|ZP_11839897.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|416726339|ref|ZP_11846400.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|416731219|ref|ZP_11849134.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|416740826|ref|ZP_11854699.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|416744802|ref|ZP_11856760.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|416752699|ref|ZP_11860511.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|416763692|ref|ZP_11867366.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|416770201|ref|ZP_11871553.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|418483522|ref|ZP_13052529.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|418488590|ref|ZP_13056195.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|418496676|ref|ZP_13063110.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|418500756|ref|ZP_13067147.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|418503872|ref|ZP_13070231.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|418508531|ref|ZP_13074834.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|418523967|ref|ZP_13089955.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|322615680|gb|EFY12600.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322618740|gb|EFY15629.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322621846|gb|EFY18696.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322627571|gb|EFY24362.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322630877|gb|EFY27641.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322637904|gb|EFY34605.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322642267|gb|EFY38874.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322643862|gb|EFY40410.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322651060|gb|EFY47445.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322656685|gb|EFY52973.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322659891|gb|EFY56134.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322661900|gb|EFY58116.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322666353|gb|EFY62531.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322672772|gb|EFY68883.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322676202|gb|EFY72273.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322680686|gb|EFY76724.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322684420|gb|EFY80424.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323194243|gb|EFZ79440.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323197389|gb|EFZ82529.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323201494|gb|EFZ86558.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323213019|gb|EFZ97821.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323215392|gb|EGA00136.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323219375|gb|EGA03860.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323226196|gb|EGA10413.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323228849|gb|EGA12978.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323236540|gb|EGA20616.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323239960|gb|EGA24007.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323241994|gb|EGA26023.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323247859|gb|EGA31796.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323251502|gb|EGA35373.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323258132|gb|EGA41809.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323263725|gb|EGA47246.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323265681|gb|EGA49177.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323270126|gb|EGA53574.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|366057106|gb|EHN21411.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|366061015|gb|EHN25268.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|366067288|gb|EHN31438.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|366069760|gb|EHN33882.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|366072200|gb|EHN36292.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|366079786|gb|EHN43768.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|366830930|gb|EHN57796.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|372208279|gb|EHP21775.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
Length = 244
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 112/254 (44%), Gaps = 35/254 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQL---SGEENDFPFLLCSDPLLNKE---LLSHDRSSFS 134
+T+GI+GG +T ++L K V+L S ++ P ++ S P + LLS S F
Sbjct: 3 HTIGILGGMGPAATADMLEKFVELRHASCDQQHIPLIVSSIPDIPDRTACLLSGGPSPF- 61
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
L R LE AGA CIV+PC+ +H W D++ + +
Sbjct: 62 -----------------RYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKARMISI 104
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHT 254
+ ++ S +G+LA NA L G YQ+K G ++ P+ A +
Sbjct: 105 LDATLGDIPP---------SARHVGLLATNATLATGLYQKKALARGLTLIQPEDAG-QAL 154
Query: 255 LIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-KCIDP 313
++ A+ L R D A+ LL + L+ R +I+ ++ ++ + + ID
Sbjct: 155 VMQAIYTLKRGDKTVAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDS 214
Query: 314 MDALARSTIKWVKS 327
+L R+ I+W +S
Sbjct: 215 TASLVRAAIRWYES 228
>gi|207859637|ref|YP_002246288.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|421356820|ref|ZP_15807135.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|421364125|ref|ZP_15814362.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|421365799|ref|ZP_15816010.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|421371770|ref|ZP_15821927.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|421375085|ref|ZP_15825201.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|421379143|ref|ZP_15829217.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|421384369|ref|ZP_15834396.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|421391362|ref|ZP_15841329.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|421394088|ref|ZP_15844031.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|421397555|ref|ZP_15847470.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|421401615|ref|ZP_15851486.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|421406635|ref|ZP_15856448.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|421413941|ref|ZP_15863690.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|421415179|ref|ZP_15864911.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|421420339|ref|ZP_15870017.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|421424612|ref|ZP_15874252.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|421429132|ref|ZP_15878731.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|421436403|ref|ZP_15885934.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|421438288|ref|ZP_15887786.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|421442727|ref|ZP_15892175.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|421450124|ref|ZP_15899500.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|436623940|ref|ZP_20514915.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|436713983|ref|ZP_20518745.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|436798464|ref|ZP_20523423.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|436805792|ref|ZP_20526312.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|436817451|ref|ZP_20534513.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|436846343|ref|ZP_20539274.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|436851922|ref|ZP_20542418.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|436858702|ref|ZP_20547107.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|436863960|ref|ZP_20550179.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|436869140|ref|ZP_20553512.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|436881266|ref|ZP_20560807.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|436884539|ref|ZP_20562183.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|436892689|ref|ZP_20566816.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|436900100|ref|ZP_20571180.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|436910372|ref|ZP_20576899.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|436916573|ref|ZP_20580420.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|436926337|ref|ZP_20586291.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|436935089|ref|ZP_20590639.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|436939450|ref|ZP_20593756.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|436952057|ref|ZP_20601087.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|436956816|ref|ZP_20602729.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|436972764|ref|ZP_20610350.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|436986938|ref|ZP_20615638.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|436995165|ref|ZP_20619179.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|437002630|ref|ZP_20621248.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|437015529|ref|ZP_20625815.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|437034573|ref|ZP_20633087.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|437040394|ref|ZP_20634643.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|437049850|ref|ZP_20640252.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|437057780|ref|ZP_20644702.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|437063346|ref|ZP_20648021.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|437072292|ref|ZP_20652464.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|437084508|ref|ZP_20659673.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|437093848|ref|ZP_20664086.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|437100750|ref|ZP_20666130.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|437123243|ref|ZP_20672853.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|437126794|ref|ZP_20674631.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|437136145|ref|ZP_20679695.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|437148401|ref|ZP_20687478.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|437149815|ref|ZP_20688368.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|437160529|ref|ZP_20694689.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|437172550|ref|ZP_20701162.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|437176434|ref|ZP_20703440.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|437180857|ref|ZP_20706202.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|437199522|ref|ZP_20711524.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|437262558|ref|ZP_20718947.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|437268578|ref|ZP_20722030.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|437280414|ref|ZP_20727844.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|437284588|ref|ZP_20729723.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|437312601|ref|ZP_20736547.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|437323193|ref|ZP_20739157.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|437345345|ref|ZP_20746488.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|437374922|ref|ZP_20749763.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|437410029|ref|ZP_20752592.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|437447712|ref|ZP_20758978.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|437465325|ref|ZP_20763891.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|437475442|ref|ZP_20766615.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|437493065|ref|ZP_20771839.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|437508461|ref|ZP_20776260.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|437523129|ref|ZP_20779248.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|437559233|ref|ZP_20785649.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|437569851|ref|ZP_20788098.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|437584512|ref|ZP_20792740.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|437610595|ref|ZP_20800906.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|437618557|ref|ZP_20803170.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|437637590|ref|ZP_20807351.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|437659828|ref|ZP_20812320.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|437671316|ref|ZP_20815902.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|437691345|ref|ZP_20820688.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|437706126|ref|ZP_20825328.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|437732883|ref|ZP_20831887.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|437754078|ref|ZP_20834101.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|437807106|ref|ZP_20839690.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|437939297|ref|ZP_20851548.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|438058814|ref|ZP_20856608.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
gi|438085245|ref|ZP_20858707.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|438103488|ref|ZP_20865403.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|438113612|ref|ZP_20869700.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|445175526|ref|ZP_21397381.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|445216939|ref|ZP_21402165.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|445227690|ref|ZP_21404386.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|445252658|ref|ZP_21409032.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
gi|445333869|ref|ZP_21415001.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|445346690|ref|ZP_21418897.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|445361177|ref|ZP_21423715.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|206711440|emb|CAR35824.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|395984899|gb|EJH94074.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|395992717|gb|EJI01828.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|395992994|gb|EJI02104.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|396002294|gb|EJI11286.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|396006254|gb|EJI15224.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|396007553|gb|EJI16500.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|396011770|gb|EJI20676.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|396016433|gb|EJI25301.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|396020003|gb|EJI28853.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|396033237|gb|EJI41948.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|396033321|gb|EJI42029.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|396034520|gb|EJI43210.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|396037750|gb|EJI46395.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|396045456|gb|EJI54049.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|396048253|gb|EJI56809.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|396053427|gb|EJI61922.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|396059414|gb|EJI67868.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|396059569|gb|EJI68022.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|396067566|gb|EJI75924.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|396072862|gb|EJI81170.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|396073458|gb|EJI81759.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|434960538|gb|ELL53912.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|434963346|gb|ELL56460.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|434969805|gb|ELL62479.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|434971389|gb|ELL63905.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|434977990|gb|ELL70068.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|434985969|gb|ELL77648.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|434988672|gb|ELL80258.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|434989014|gb|ELL80590.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|434996957|gb|ELL88252.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|435003172|gb|ELL94200.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|435004296|gb|ELL95272.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|435013382|gb|ELM04031.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|435020388|gb|ELM10792.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|435022427|gb|ELM12744.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|435027752|gb|ELM17852.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|435033062|gb|ELM22979.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|435037513|gb|ELM27317.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|435040124|gb|ELM29891.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|435047717|gb|ELM37290.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|435049826|gb|ELM39336.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|435055302|gb|ELM44719.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|435058024|gb|ELM47381.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|435060899|gb|ELM50141.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|435063247|gb|ELM52409.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|435073640|gb|ELM62496.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|435076075|gb|ELM64872.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|435084207|gb|ELM72794.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|435087372|gb|ELM75879.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|435095462|gb|ELM83776.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|435095634|gb|ELM83924.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|435102328|gb|ELM90433.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|435105942|gb|ELM93968.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|435110479|gb|ELM98397.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|435110763|gb|ELM98671.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|435121533|gb|ELN09066.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|435124525|gb|ELN11982.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|435129880|gb|ELN17149.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|435132118|gb|ELN19318.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|435136881|gb|ELN23954.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|435144915|gb|ELN31745.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|435146920|gb|ELN33701.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|435147360|gb|ELN34130.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|435155745|gb|ELN42274.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|435161738|gb|ELN47952.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|435167006|gb|ELN52948.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|435170561|gb|ELN56308.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|435173873|gb|ELN59340.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|435182615|gb|ELN67612.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|435185316|gb|ELN70196.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|435190160|gb|ELN74754.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|435194925|gb|ELN79339.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|435204537|gb|ELN88208.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|435205239|gb|ELN88855.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|435209323|gb|ELN92645.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|435216755|gb|ELN99227.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|435219669|gb|ELO02012.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|435223308|gb|ELO05342.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|435228202|gb|ELO09646.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|435233210|gb|ELO14252.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|435239654|gb|ELO20143.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|435249715|gb|ELO29476.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|435249778|gb|ELO29538.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|435252025|gb|ELO31622.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|435259176|gb|ELO38405.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|435262693|gb|ELO41776.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|435269584|gb|ELO48115.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|435279249|gb|ELO57052.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|435280271|gb|ELO57996.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|435280716|gb|ELO58404.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|435287531|gb|ELO64730.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|435291988|gb|ELO68778.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|435301053|gb|ELO77100.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|435309540|gb|ELO84222.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|435311080|gb|ELO85363.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|435313971|gb|ELO87473.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
gi|435319242|gb|ELO92096.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|435323125|gb|ELO95294.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|435329353|gb|ELP00777.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|444857920|gb|ELX82915.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|444857939|gb|ELX82933.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|444866784|gb|ELX91499.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|444875397|gb|ELX99599.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|444877787|gb|ELY01923.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|444884816|gb|ELY08631.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|444889498|gb|ELY12931.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
Length = 244
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 35/254 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQL---SGEENDFPFLLCSDPLLNKE---LLSHDRSSFS 134
+T+GI+GG +T ++L K V+L S ++ P ++ S P + LLS S +
Sbjct: 3 HTIGILGGMGPAATADMLEKFVELRHASCDQQHIPLIVSSIPDIPDRTACLLSGGPSPY- 61
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
L R LE AGA CIV+PC+ +H W D++ + +
Sbjct: 62 -----------------RYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKARMISI 104
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHT 254
+ ++ S +G+LA NA L G YQ+K G ++ P++A +
Sbjct: 105 LDATLGDIPP---------SARHVGLLATNATLATGLYQKKALARGLTLIQPEEAG-QAL 154
Query: 255 LIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-KCIDP 313
++ A+ L R D A+ LL + L+ R +I+ ++ ++ + + ID
Sbjct: 155 VMQAIYTLKRGDKTVAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDS 214
Query: 314 MDALARSTIKWVKS 327
+L R+ I+W +S
Sbjct: 215 TASLVRAAIRWYES 228
>gi|227327191|ref|ZP_03831215.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum
WPP14]
Length = 238
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 116/251 (46%), Gaps = 38/251 (15%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLS---GEENDFPFLLCSDPLL---NKELLSHDRSSFSSL 136
VGI+GG +T++ + KL++ + +++ P + S P + + +L H S +
Sbjct: 5 VGILGGMGPGATVDAMQKLIKNTPAYRDQDHIPMIAVSIPDIPDRTQCILQHSASPLDKM 64
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
L+ ++ LE AGA CI++PC+ +H W +++ + C + + +
Sbjct: 65 -----------------LQYMKI-LENAGAECIIIPCNTAHYWFNDLKQQCRAEMISIID 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
+ +K AN R+G+LA A + A YQ+ L + + PD A +H ++
Sbjct: 107 VTCQAIKHANTT--------RVGLLATTATVKARIYQDNLITDNIDCYTPDDAD-QHQVM 157
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPD---DPLLKKCIDP 313
++ A D+ GA +LL LL V +IL ++ +L + P + +D
Sbjct: 158 ESIYAYKSGDIAGAYSLLSPVKDRLLQAGVEKIILGCTELPLILEQEVRTSP--QHYVDA 215
Query: 314 MDALARSTIKW 324
+ L + T++W
Sbjct: 216 TEELIKKTVEW 226
>gi|300819053|ref|ZP_07099256.1| aspartate racemase [Escherichia coli MS 107-1]
gi|301328463|ref|ZP_07221533.1| aspartate racemase [Escherichia coli MS 78-1]
gi|415881415|ref|ZP_11545425.1| aspartate racemase [Escherichia coli MS 79-10]
gi|300528353|gb|EFK49415.1| aspartate racemase [Escherichia coli MS 107-1]
gi|300845127|gb|EFK72887.1| aspartate racemase [Escherichia coli MS 78-1]
gi|342926146|gb|EGU94868.1| aspartate racemase [Escherichia coli MS 79-10]
Length = 229
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 14/170 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE AGA CIV+PC+ +H W E+ C + L + + E++ RIG+
Sbjct: 61 LEDAGAECIVIPCNTAHYWFKELKDACHIDILSIIDTTVDEVR--------VCGKTRIGL 112
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQV 280
LA +A L G YQ+ ++ GF + PD A + ++ ++ +L +V A+ L+ +
Sbjct: 113 LATDATLYMGLYQKGIESLGFNYITPD-ADGQKNVMKSIYSLKAGNVTHAQKLMEEQAEN 171
Query: 281 LLVRAVNTVILASDDMQDLLP---PDDPLLKKCIDPMDALARSTIKWVKS 327
L R +IL ++ +L D PL + ID +L R+ IKW ++
Sbjct: 172 LFSRGAEILILGCTEIPIILSQAVKDQPL--RYIDSTASLVRAGIKWYEN 219
>gi|438144308|ref|ZP_20875429.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|434939274|gb|ELL46125.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
Length = 244
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 35/254 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQL---SGEENDFPFLLCSDPLLNKE---LLSHDRSSFS 134
+T+GI+GG +T ++L K V+L S ++ P ++ S P + LLS S +
Sbjct: 3 HTIGILGGMGPAATADMLEKFVELRHDSCDQQHIPLIVSSIPDIPDRTACLLSGGPSPY- 61
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
L R LE AGA CIV+PC+ +H W D++ + +
Sbjct: 62 -----------------RYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKARMISI 104
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHT 254
+ ++ S +G+LA NA L G YQ+K G ++ P++A +
Sbjct: 105 LDATLGDIPP---------SARHVGLLATNATLATGLYQKKALARGLTLIQPEEAG-QAL 154
Query: 255 LIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-KCIDP 313
++ A+ L R D A+ LL + L+ R +I+ ++ ++ + + ID
Sbjct: 155 VMQAIYTLKRGDKTVAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDS 214
Query: 314 MDALARSTIKWVKS 327
+L R+ I+W +S
Sbjct: 215 TASLVRAAIRWYES 228
>gi|48243626|gb|AAT40775.1| putative aspartate racemase [Haemophilus influenzae]
Length = 230
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 129/256 (50%), Gaps = 38/256 (14%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSG---EENDFPFLLCSDPLLNKELLSHDRSSFSSLN 137
N +GI+GG +T ++ K +Q + ++ P ++ S P + DR++ S L+
Sbjct: 3 NIIGILGGMGPAATADMFQKFIQFTPAHCDQEHIPLVISSIPDIP------DRTT-SILH 55
Query: 138 CKGGGVQLDDSLIVENLRRKRVF-LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
GG L L +E +R++ LE AGA+CI++ C+ +H W+DE+ + C V L++ +
Sbjct: 56 --GGESPL---LAME----ERIYGLENAGAKCILIACNTAHYWYDELKEKCHVDMLNIID 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH--T 254
E+ L+ G +IG+LA +A L YQ+ L+ G +LP++ EH +
Sbjct: 107 STINEV-------LQMGKT-KIGILATDATLATKLYQKTLEKYGLICLLPNE---EHQKS 155
Query: 255 LIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLP---PDDPLLKKCI 311
++ ++ +++ A L+ I L+ +IL ++ +L + P+L +
Sbjct: 156 VMESIYLYKSGEIQKAEELMLIQRDELIRHGSEVIILGCTEIPLILKNAMREQPILYE-- 213
Query: 312 DPMDALARSTIKWVKS 327
D AL R+ I+W ++
Sbjct: 214 DSTAALVRAAIRWYQT 229
>gi|417327996|ref|ZP_12113259.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
gi|353569098|gb|EHC33780.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
Length = 244
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 35/254 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQL---SGEENDFPFLLCSDPLLNKE---LLSHDRSSFS 134
+T+GI+GG +T ++L K V+L S ++ P ++ S P + LLS S +
Sbjct: 3 HTIGILGGMGPAATADMLEKFVELRHASCDQQHIPLIVSSIPDIPDRTACLLSGGPSPY- 61
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
L R LE AGA CIV+PC+ +H W D++ + +
Sbjct: 62 -----------------RYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKARMISI 104
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHT 254
+ ++ S +G+LA NA L G YQ+K G ++ P+ A +
Sbjct: 105 LDATLGDIPP---------SARHVGLLATNATLATGLYQKKALARGLTLIQPEDAG-QAL 154
Query: 255 LIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-KCIDP 313
++ A+ L R D A+ LL + L+ R +I+ ++ ++ + + ID
Sbjct: 155 VMQAIYTLKRGDKIAAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDS 214
Query: 314 MDALARSTIKWVKS 327
+L R+ I+W +S
Sbjct: 215 TASLVRAAIRWYES 228
>gi|293605594|ref|ZP_06687974.1| aspartate racemase [Achromobacter piechaudii ATCC 43553]
gi|292815974|gb|EFF75075.1| aspartate racemase [Achromobacter piechaudii ATCC 43553]
Length = 247
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 106/223 (47%), Gaps = 23/223 (10%)
Query: 107 EENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGA 166
++ P LL +DP + DRSS GG L +V+ +R FLE+AGA
Sbjct: 37 DQQHIPTLLRNDPRIP------DRSSA---YMAGGESPLPH--MVQGVR----FLEQAGA 81
Query: 167 RCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAI 226
+ I +PC+ +H+W+ ++ VP LH+ + V +L+ L G RIG++ A
Sbjct: 82 QLIAIPCNTAHLWYHDIAAATGVPVLHIIQAVIDDLRRLG---LPKG---RIGLMGTAAT 135
Query: 227 LTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAV 286
L G YQ+ L +G+E ++PD +E + ++ A+ +E A + L R
Sbjct: 136 LKLGLYQKHLLAQGYECIVPDDDEVERYCMGSIRAVKGNRLEEAFAPAAECISRLKARGA 195
Query: 287 NTVILASDDMQDLLPP--DDPLLKKCIDPMDALARSTIKWVKS 327
+ V+L ++ +P L D +DALAR+ I ++
Sbjct: 196 DAVVLGCTELPLAVPHALRASLGVTLTDSIDALARAAIAHYEA 238
>gi|417844331|ref|ZP_12490375.1| Putative DNA-binding transcriptional regulator [Haemophilus
haemolyticus M21639]
gi|341956784|gb|EGT83200.1| Putative DNA-binding transcriptional regulator [Haemophilus
haemolyticus M21639]
Length = 230
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 122/256 (47%), Gaps = 38/256 (14%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSG---EENDFPFLLCSDPLLNKELLSHDRSSFSSLN 137
N +GI+GG +T ++ K +Q + ++ P ++ S P + S R S L
Sbjct: 3 NIIGILGGMGPAATADMFQKFIQFTPAHCDQEHIPLVISSIPDIPDRTTSILRGGESPL- 61
Query: 138 CKGGGVQLDDSLIVENLRRKRVF-LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
L +E +R++ LE AGA+CI++ C+ +H W+DE+ + C V L++ +
Sbjct: 62 -----------LAME----ERIYGLENAGAKCILIACNTAHYWYDELKEKCHVDMLNIID 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH--T 254
E+ L+ G +IG+LA +A L YQ+ L+ G +LP++ EH +
Sbjct: 107 STINEV-------LQMGKT-KIGILATDATLATKLYQKTLEKYGLICLLPNE---EHQKS 155
Query: 255 LIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLP---PDDPLLKKCI 311
++ ++ +++ A L+ I L+ +IL ++ +L + P L +
Sbjct: 156 VMESIYLYKSGEIQKAEELMLIQRDELIRYGAEVIILGCTEIPLILKNAMREQPTLYE-- 213
Query: 312 DPMDALARSTIKWVKS 327
D AL R+ I+W ++
Sbjct: 214 DSTAALVRAAIRWYQT 229
>gi|145631325|ref|ZP_01787097.1| predicted DNA-binding transcriptional regulator [Haemophilus
influenzae R3021]
gi|144983110|gb|EDJ90610.1| predicted DNA-binding transcriptional regulator [Haemophilus
influenzae R3021]
Length = 230
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 128/256 (50%), Gaps = 38/256 (14%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSG---EENDFPFLLCSDPLLNKELLSHDRSSFSSLN 137
N +GI+GG +T ++ K +Q + ++ P ++ S P + DR++ S L+
Sbjct: 3 NIIGILGGMGPAATADMFQKFIQFTPAHCDQEHIPLVISSIPDIP------DRTT-SILH 55
Query: 138 CKGGGVQLDDSLIVENLRRKRVF-LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
GG L L +E +R++ LE AGA+CI++ C+ +H W+DE+ + C V L++ +
Sbjct: 56 --GGESPL---LAME----ERIYGLENAGAKCILIACNTAHYWYDELKEKCHVDMLNIID 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH--T 254
E+ L+ G +IG+LA +A L YQ+ L+ G +LP++ EH +
Sbjct: 107 STINEV-------LQMGKT-KIGILATDATLATKLYQKTLEKYGLICLLPNE---EHQKS 155
Query: 255 LIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLP---PDDPLLKKCI 311
++ ++ +++ A L+ I L+ +IL ++ +L + P L +
Sbjct: 156 VMESIYLYKSGEIQKAEELMLIQRDELIRHGAEVIILGCTEIPLILKNAMREQPTLYE-- 213
Query: 312 DPMDALARSTIKWVKS 327
D AL R+ I+W ++
Sbjct: 214 DSTAALVRAAIRWYQT 229
>gi|213648841|ref|ZP_03378894.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. J185]
Length = 226
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 111/252 (44%), Gaps = 35/252 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQL---SGEENDFPFLLCSDPLLNKE---LLSHDRSSFS 134
+T+GI+GG +T ++L K V+L S ++ P ++ S P + LLS S +
Sbjct: 3 HTIGILGGMGPAATADMLEKFVELRHVSCDQQHIPLIVSSIPDIPDRTACLLSGGPSPY- 61
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
L R LE AGA CIV+PC+ +H W D++ + +
Sbjct: 62 -----------------RYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKARMISI 104
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHT 254
+ ++ S +G+LA NA L G YQ+K G ++ P+ A +
Sbjct: 105 LDATLGDIPP---------SARHVGLLATNATLATGLYQKKALARGLTLIQPEDAG-QAL 154
Query: 255 LIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-KCIDP 313
++ A+ L R D A+ LL + L+ R +I+ ++ ++ + + ID
Sbjct: 155 VMQAIYTLKRGDKTAAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDS 214
Query: 314 MDALARSTIKWV 325
+L R+ I+W+
Sbjct: 215 TASLVRAAIRWL 226
>gi|33597484|ref|NP_885127.1| aspartate racemase [Bordetella parapertussis 12822]
gi|33601880|ref|NP_889440.1| aspartate racemase [Bordetella bronchiseptica RB50]
gi|412338033|ref|YP_006966788.1| aspartate racemase [Bordetella bronchiseptica 253]
gi|427814492|ref|ZP_18981556.1| putative aspartate racemase [Bordetella bronchiseptica 1289]
gi|427818883|ref|ZP_18985946.1| putative aspartate racemase [Bordetella bronchiseptica D445]
gi|427822492|ref|ZP_18989554.1| putative aspartate racemase [Bordetella bronchiseptica Bbr77]
gi|33573912|emb|CAE38228.1| putative aspartate racemase [Bordetella parapertussis]
gi|33576317|emb|CAE33396.1| putative aspartate racemase [Bordetella bronchiseptica RB50]
gi|408767867|emb|CCJ52624.1| putative aspartate racemase [Bordetella bronchiseptica 253]
gi|410565492|emb|CCN23049.1| putative aspartate racemase [Bordetella bronchiseptica 1289]
gi|410569883|emb|CCN18006.1| putative aspartate racemase [Bordetella bronchiseptica D445]
gi|410587757|emb|CCN02805.1| putative aspartate racemase [Bordetella bronchiseptica Bbr77]
Length = 247
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 117/230 (50%), Gaps = 31/230 (13%)
Query: 107 EENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSL--IVENLRRKRVFLEKA 164
++ P LL +DP + DRS+ + +GG +D L ++ +R FL +A
Sbjct: 37 DQQHIPTLLLNDPRIP------DRSNART---QGG----EDPLPAMIAGMR----FLREA 79
Query: 165 GARCIVMPCHLSHIWHDEVC--KGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLA 222
GAR I +PC+ +H+W++ + GC+V LH+ E VA++L+ L G RIG++
Sbjct: 80 GARLIAIPCNTAHLWYEPLAAVAGCTV--LHIIEAVAQDLRRQG---LHGG---RIGLMG 131
Query: 223 KNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLL 282
+A L G YQ+ LQ +G+ ++P+ +E + ++ A+ ++ A + L
Sbjct: 132 TSATLALGLYQQTLQRQGYSCIIPEPDEVERYCMGSIRAVKANRLDLAYEPAAECIARLK 191
Query: 283 VRAVNTVILASDDMQDLLPPD-DPLLK-KCIDPMDALARSTIKWVKSAEK 330
R + V+L ++ +P P L + D +DALA + I+ ++ ++
Sbjct: 192 ARGADAVVLGCTELPLAVPHALRPGLGIRLTDSIDALALAAIEHYEADQQ 241
>gi|410473216|ref|YP_006896497.1| aspartate racemase [Bordetella parapertussis Bpp5]
gi|408443326|emb|CCJ49971.1| putative aspartate racemase [Bordetella parapertussis Bpp5]
Length = 247
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 117/230 (50%), Gaps = 31/230 (13%)
Query: 107 EENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSL--IVENLRRKRVFLEKA 164
++ P LL +DP + DRS+ + +GG +D L ++ +R FL +A
Sbjct: 37 DQQHIPTLLLNDPRIP------DRSNART---QGG----EDPLPAMIAGMR----FLREA 79
Query: 165 GARCIVMPCHLSHIWHDEVC--KGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLA 222
GAR I +PC+ +H+W++ + GC+V LH+ E VA++L+ L G RIG++
Sbjct: 80 GARLIAIPCNTAHLWYEPLAAVAGCTV--LHIIEAVAQDLRRQG---LHGG---RIGLMG 131
Query: 223 KNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLL 282
+A L G YQ+ LQ +G+ ++P+ +E + ++ A+ ++ A + L
Sbjct: 132 TSATLALGLYQQTLQRQGYSCIIPEPDEVERYCMGSIRAVKANRLDLAYEPAAECIARLK 191
Query: 283 VRAVNTVILASDDMQDLLPPD-DPLLK-KCIDPMDALARSTIKWVKSAEK 330
R + V+L ++ +P P L + D +DALA + I+ ++ ++
Sbjct: 192 ARGADAVVLGCTELPLAVPHALRPGLGIRLTDSIDALALAAIEHYEADQQ 241
>gi|365855327|ref|ZP_09395381.1| aspartate racemase [Acetobacteraceae bacterium AT-5844]
gi|363719249|gb|EHM02559.1| aspartate racemase [Acetobacteraceae bacterium AT-5844]
Length = 234
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 119/250 (47%), Gaps = 26/250 (10%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+G++GG ++ + +L L+ E D P +L SDP + DR++ +
Sbjct: 6 LGVLGGMGPLASAQFMLRLTLLTPAERDQDHIPAVLWSDPRVP------DRTAA---RLQ 56
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
GG +D L R L+ AGA I +PC+ +H W+D++ +P LH+ + A
Sbjct: 57 GG----EDPL--PWFTRAIAELKAAGAGAIAIPCNTAHGWYDQMVAATDLPILHIVDAAA 110
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
++L ++ +G R+GV+ L YQ +L+ G+EV++PD+A M+ + P +
Sbjct: 111 EDLARQGIR---SG---RVGVMGTAGTLAMRLYQPRLEALGYEVIVPDEAEMQSLVSPGI 164
Query: 260 DALNRKDVEGARNLLRIALQVLLVRAVNTVILASDD--MQDLLPPDDPLLKKCIDPMDAL 317
+ V A L A L R V+L + + L P + +D +DAL
Sbjct: 165 ALVKANKVTEAYAPLAEAAGRLRDRGAAAVVLGCTEIPLGILAGPYAEIGVPLVDTIDAL 224
Query: 318 ARSTIKWVKS 327
A ++I+W +S
Sbjct: 225 ALASIRWARS 234
>gi|410420028|ref|YP_006900477.1| aspartate racemase [Bordetella bronchiseptica MO149]
gi|408447323|emb|CCJ58996.1| putative aspartate racemase [Bordetella bronchiseptica MO149]
Length = 247
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 117/230 (50%), Gaps = 31/230 (13%)
Query: 107 EENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSL--IVENLRRKRVFLEKA 164
++ P LL +DP + DRS+ + +GG +D L ++ +R FL +A
Sbjct: 37 DQQHIPTLLLNDPRIP------DRSNART---QGG----EDPLPAMIAGMR----FLREA 79
Query: 165 GARCIVMPCHLSHIWHDEVC--KGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLA 222
GAR I +PC+ +H+W++ + GC+V LH+ E VA++L+ L G RIG++
Sbjct: 80 GARLIAIPCNTAHLWYEPLAAVAGCTV--LHIIEAVAQDLRRQG---LHGG---RIGLMG 131
Query: 223 KNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLL 282
+A L G YQ+ LQ +G+ ++P+ +E + ++ A+ ++ A + L
Sbjct: 132 TSATLALGLYQQTLQRQGYSCIIPEPDEVERYCMGSIRAVKANRLDLAYEPAAECIARLN 191
Query: 283 VRAVNTVILASDDMQDLLPPD-DPLLK-KCIDPMDALARSTIKWVKSAEK 330
R + V+L ++ +P P L + D +DALA + I+ ++ ++
Sbjct: 192 ARGADAVVLGCTELPLAVPHALRPGLGIRLTDSIDALALAAIEHYEADQQ 241
>gi|311281614|ref|YP_003943845.1| aspartate racemase [Enterobacter cloacae SCF1]
gi|308750809|gb|ADO50561.1| aspartate racemase [Enterobacter cloacae SCF1]
Length = 244
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 115/254 (45%), Gaps = 35/254 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQL---SGEENDFPFLLCSDPLLNKE---LLSHDRSSFS 134
+T+GI+GG +T ++L K V L S ++ P ++ S P + LLS S F
Sbjct: 3 HTIGILGGMGPAATADMLEKFVALRRASCDQQHIPLIVSSIPDIPDRTACLLSGGPSPFH 62
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
SL + LE AGA CIV+PC+ +H W +++ V + +
Sbjct: 63 SLE------------------QYLHMLEAAGAECIVIPCNTAHYWFEDLQAVAKVEMISI 104
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHT 254
+A + + G +G+LA +A L A YQ+K G ++ P++ +
Sbjct: 105 --------LDATLNAIPDGVSC-VGLLATDATLAARLYQDKAAARGMTLIQPEREE-QAQ 154
Query: 255 LIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLP-PDDPLLKKCIDP 313
++ A+ AL R D A LL ++ L R +I+ ++ ++ +D + +D
Sbjct: 155 VMQAIYALKRGDKTAAEALLLPQIRQLAARGAQAIIMGCTEIPLIVAGHEDAFSCRFVDS 214
Query: 314 MDALARSTIKWVKS 327
+L R+ I+W +S
Sbjct: 215 TASLVRAAIRWYES 228
>gi|288353362|ref|YP_003422659.1| aspartate racemase [Zymomonas mobilis subsp. mobilis ZM4]
gi|285026763|gb|ADC33856.1| aspartate racemase [Zymomonas mobilis subsp. mobilis ZM4]
Length = 237
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 121/255 (47%), Gaps = 31/255 (12%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+G++GG +TL+LL K++ + E D P + + P + DR +L K
Sbjct: 7 IGVLGGMGPLATLDLLHKIIAATPAEKDQDHVPVVCWNVPQIA------DRQK--ALAGK 58
Query: 140 GGGVQLDDSL--IVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS-E 196
G D L ++E + + L + IV+PC+ +H W+ + + P LH++ E
Sbjct: 59 G-----DSPLPQLLEGIEK----LNRLDVSHIVIPCNTAHHWYHALVEVSHAPILHIADE 109
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
+ + L +EA P ++G++A L+AG+YQ+KL EV+ P + M +
Sbjct: 110 TITQILS------MEA-VPKKVGIIATQGTLSAGWYQKKLIAANIEVIFPTEGEMNRLFV 162
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD-PLLKKCIDPMD 315
A+ + + A LL L+ R ++LA ++ L ++ P LKK IDP +
Sbjct: 163 AGCYAVKQNKLATAAQLLEELSASLVNRGAEKLLLACTEVPLALAYNNSPFLKKSIDPTE 222
Query: 316 ALARSTIKWVKSAEK 330
LA+S + K +K
Sbjct: 223 MLAQSCVNIWKDQKK 237
>gi|441502376|ref|ZP_20984387.1| Aspartate racemase [Photobacterium sp. AK15]
gi|441430123|gb|ELR67574.1| Aspartate racemase [Photobacterium sp. AK15]
Length = 236
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 118/251 (47%), Gaps = 32/251 (12%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+GI+GG +T+ + K++ + ND P L+ ++P + DR+++
Sbjct: 5 LGILGGMGPLATVEFMQKIIARTPAHNDQQHIPMLVSNNPQIP------DRTAY----IL 54
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G G D V L++ L+ AGA CIV+PC+ +H W+ + + V + + + V
Sbjct: 55 GEG---QDPFPV--LKQGMEQLQNAGAECIVIPCNTAHYWYPRLTRCSKVHMISIIDSVV 109
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
E ++ + ++GV+A +A + YQ KL + + + PD+ + ++ +
Sbjct: 110 DEARQRQYR--------KVGVMATSATMMTRMYQTKLAQKQIDAIEPDEGA-QLAVMEGI 160
Query: 260 DALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPP---DDPLLKKCIDPMDA 316
A+ +VE + L+ + LL + VI ++ L + P + C+D +D
Sbjct: 161 YAVKAGEVERGKQLMLPVFRNLLEQGAEAVIFGCTEIPVALAEQAIEQP--EACLDSLDI 218
Query: 317 LARSTIKWVKS 327
LA+ I+W ++
Sbjct: 219 LAQQCIEWAQA 229
>gi|260582417|ref|ZP_05850209.1| aspartate racemase [Haemophilus influenzae NT127]
gi|260094568|gb|EEW78464.1| aspartate racemase [Haemophilus influenzae NT127]
Length = 230
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 127/256 (49%), Gaps = 38/256 (14%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSG---EENDFPFLLCSDPLLNKELLSHDRSSFSSLN 137
N +GI+GG +T ++ K +Q + ++ P ++ S P + DR++ S L+
Sbjct: 3 NIIGILGGMGPAATADMFQKFIQFTPAHCDQEHIPLVISSIPDIP------DRTT-SILH 55
Query: 138 CKGGGVQLDDSLIVENLRRKRVF-LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
GG L L +E +R++ LE AGA+CI++ C+ +H W+DE+ + C V L++ +
Sbjct: 56 --GGESPL---LAME----ERIYGLENAGAKCILIACNTAHYWYDELKEKCHVDMLNIID 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH--T 254
E+ L+ G +IG+LA +A L YQ+ L+ G +LP++ EH +
Sbjct: 107 STINEV-------LQMGKT-KIGILATDATLATKLYQKTLEKYGLICLLPNE---EHQKS 155
Query: 255 LIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLP---PDDPLLKKCI 311
++ ++ +++ A L+ I L+ +IL ++ +L + P L +
Sbjct: 156 VMESIYLYKSGEIQKAEELMLIQRDELIRHGAEVIILGCTEIPLILKNAMREQPTLYE-- 213
Query: 312 DPMDALARSTIKWVKS 327
D AL R+ I W ++
Sbjct: 214 DSTAALVRAAIHWYQT 229
>gi|54309523|ref|YP_130543.1| aspartate racemase [Photobacterium profundum SS9]
gi|46913959|emb|CAG20741.1| hypothetical aspartate racemase [Photobacterium profundum SS9]
Length = 226
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 107/247 (43%), Gaps = 44/247 (17%)
Query: 93 STLNLLGKLVQLSGEEND---FPFLLCSDPLL---NKELLSHDRSSFSSLNCKGGGVQLD 146
+T+ + K++ + ND P L+ ++P + L+S+ + +L K G QL
Sbjct: 5 ATVEFMQKIISRTPAHNDQQHIPMLVSNNPQIPDRTAYLISNGEDPYPAL--KEGMEQL- 61
Query: 147 DSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEAN 206
++AGA CIVMPC+ +H W+ + C+V + + + V E K
Sbjct: 62 ---------------QQAGAECIVMPCNTAHYWYTRLTNSCNVHTISIIDSVVDEAKHRR 106
Query: 207 MKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKD 266
+ +G+LA A + AG YQ KL + + + + ++ + A+ +
Sbjct: 107 YR--------TVGLLATTATMMAGMYQTKLAQQQINAIETTDSE-QQAIMNGIYAVKAGN 157
Query: 267 VEGARNLLRIALQVLLVRAVNTVILASDDM------QDLLPPDDPLLKKCIDPMDALARS 320
VE + L++ + +L R VI ++ Q + P + C+D +D LA
Sbjct: 158 VEHGKQLMQPVFEAMLNRGAEAVIFGCTEIPVALAEQTISQP-----QHCLDSLDILAEQ 212
Query: 321 TIKWVKS 327
+ W ++
Sbjct: 213 CVHWAQA 219
>gi|349587721|pdb|3S7Z|A Chain A, Crystal Structure Of Putative Aspartate Racemase From
Salmonella Typhimurium Complexed With Succinate
gi|349587722|pdb|3S7Z|B Chain B, Crystal Structure Of Putative Aspartate Racemase From
Salmonella Typhimurium Complexed With Succinate
Length = 268
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 112/254 (44%), Gaps = 35/254 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQL---SGEENDFPFLLCSDPLLNKE---LLSHDRSSFS 134
+T+GI+GG +T + L K V+L S ++ P ++ S P + LLS S +
Sbjct: 27 HTIGILGGXGPAATADXLEKFVELRHASCDQQHIPLIVSSIPDIPDRTACLLSGGPSPY- 85
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
L R LE AGA CIV+PC+ +H W D+ +V
Sbjct: 86 -----------------RYLERYLHXLEDAGAECIVIPCNTAHYWFDD--------LQNV 120
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHT 254
++ + +A + + S +G+LA NA L G YQ+K G ++ P+ A +
Sbjct: 121 AKARXISILDATLGDIPP-SARHVGLLATNATLATGLYQKKALARGLTLIQPEDAG-QAL 178
Query: 255 LIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-KCIDP 313
+ A+ L R D A+ LL + L+ R +I ++ ++ + + ID
Sbjct: 179 VXQAIYTLKRGDKTAAQALLLPQIDSLIARGAQAIIXGCTEIPLIVAGHERAIACPXIDS 238
Query: 314 MDALARSTIKWVKS 327
+L R+ I+W +S
Sbjct: 239 TASLVRAAIRWYES 252
>gi|50083589|ref|YP_045099.1| aspartate racemase [Acinetobacter sp. ADP1]
gi|49529565|emb|CAG67277.1| putative aspartate racemase [Acinetobacter sp. ADP1]
Length = 236
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 121/259 (46%), Gaps = 38/259 (14%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLL---NKELLSHDRSSFSSL 136
+GI+GG +T++ + K+++ + +D P ++ S P + K +++HD F
Sbjct: 5 IGILGGMGPQATVDAMNKIIKNTSAHSDQEHIPVIIVSIPDIPDRTKSIINHDDKPF--- 61
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
E +R LE A CI++PC+ +H W D++ + + + E
Sbjct: 62 ---------------EKMREYLKILENANVGCIIIPCNTAHFWFDQLQQQTHTKMISIIE 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
+ ++++N + I +LA +A + YQ++L + + LP+ ++ ++
Sbjct: 107 ATVRFIQKSNAQ--------EICILATSATINTELYQKELANHQIKFTLPE-LEIQQLVM 157
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKK---CIDP 313
++ + ++E A+N++ + + +LA ++ +L +D +++K ID
Sbjct: 158 QSIYSYKSGNIEEAKNIMINIINLYEYNPARKFLLACTEIPLIL--EDWIIEKPELFIDA 215
Query: 314 MDALARSTIKWVKSAEKGT 332
D L R+ I+W ++ + T
Sbjct: 216 TDVLIRNAIEWYQNGQPET 234
>gi|403057843|ref|YP_006646060.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum
PCC21]
gi|402805169|gb|AFR02807.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum
PCC21]
Length = 228
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 14/168 (8%)
Query: 160 FLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIG 219
LE AGA CI++PC+ +H W +++ K C + + + + +K AN R+G
Sbjct: 60 ILENAGAECIIIPCNTAHYWFNDLKKQCRAEMISIIDVTCQAIKHANTT--------RVG 111
Query: 220 VLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQ 279
+LA A + A YQ+ L + E PD A +H ++ ++ A D++ A NLL
Sbjct: 112 LLATTATVKARIYQDNLITDNIECYTPDDAD-QHQVMESIYAYKSGDIDRAYNLLSPVKD 170
Query: 280 VLLVRAVNTVILASDDMQDLLPPD---DPLLKKCIDPMDALARSTIKW 324
LL V +IL ++ +L + P + +D + L + T++W
Sbjct: 171 RLLQAGVEKIILGCTELPLILEQEVKTSP--QHYVDATEELIKKTVEW 216
>gi|302391310|ref|YP_003827130.1| aspartate racemase [Acetohalobium arabaticum DSM 5501]
gi|302203387|gb|ADL12065.1| aspartate racemase [Acetohalobium arabaticum DSM 5501]
Length = 248
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 18/171 (10%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGG 141
TVGI+GG +T+NL K++ + E D + L+N DR+ + G
Sbjct: 4 TVGILGGMGPQATVNLFQKVINFTDAECDQDHI---QALINNNPQIPDRTEY----ILGD 56
Query: 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
G L LI + + L++ GA + MPC+ +H ++DEV + +PFL++ E VA E
Sbjct: 57 GEDLTPHLI-----KGAIKLQQLGADYLAMPCNTAHYFYDEVVRYMDIPFLNMIEEVAAE 111
Query: 202 LKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
+ + G+ ++G+LA G Y++ LQ G ++ PD++ E
Sbjct: 112 VDR------KYGNDSKVGLLATTGTYQVGIYEKVLQESGVNLITPDESGKE 156
>gi|392954342|ref|ZP_10319894.1| aspartate racemase [Hydrocarboniphaga effusa AP103]
gi|391858241|gb|EIT68771.1| aspartate racemase [Hydrocarboniphaga effusa AP103]
Length = 263
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 122/252 (48%), Gaps = 28/252 (11%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+G++GG +T++ + K++ +G + D P ++CS + DR+++ N
Sbjct: 2 LGVLGGMGPAATVDFMEKVIDCTGADTDQENIPMIVCSASNIP------DRTAYILGN-- 53
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G L D ++ +RR LE AGA I +PC+ +H WH + S+P LH+ E V
Sbjct: 54 -GPDPLPDMIVA--VRR----LEVAGATRIAIPCNTAHYWHAALQAVTSLPILHIVEVVC 106
Query: 200 KEL-KEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPA 258
L +E N K A P IG+LA + L AG Y + L GF + P + +H ++ A
Sbjct: 107 DVLEREPNAK---ARGP--IGILATHGTLAAGIYSQHLAERGFSSLQP-QGDDQHEVMRA 160
Query: 259 LDALNRK-DVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-KCIDPMDA 316
+ + E L+R A Q L R + V++A ++ L + + + +D D
Sbjct: 161 IGLVKAGCTAEAIEPLMRQA-QKLWDRGCSVVVMACTEIPIALAHRPEVAQGRLLDATDE 219
Query: 317 LARSTIKWVKSA 328
LA++ + KSA
Sbjct: 220 LAKACVAIYKSA 231
>gi|121535491|ref|ZP_01667300.1| aspartate racemase [Thermosinus carboxydivorans Nor1]
gi|121305910|gb|EAX46843.1| aspartate racemase [Thermosinus carboxydivorans Nor1]
Length = 236
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 92/187 (49%), Gaps = 29/187 (15%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKEL---LSHDRSSFSS 135
TVGI+GG +T +L K++Q + +D P ++ ++P + + L H S S
Sbjct: 3 TVGILGGMGPMATADLFIKIIQNTPARSDQEHIPIIIYNNPQIPSRIDAILQHAESPRSE 62
Query: 136 LNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195
L R VFLE+AGA I MPC+ +H W++++ + ++P +++
Sbjct: 63 L------------------IRSAVFLEQAGADFIAMPCNTAHYWYNDIQQAINIPLINMI 104
Query: 196 ECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTL 255
+ + A+ P A SP I +LA A + G YQ++ G E+++P A + +
Sbjct: 105 DLTVDYI--ADKYPHAAVSP--IMLLATAATVKVGLYQQRFAARGMEILVP-TAQEQQII 159
Query: 256 IPALDAL 262
A+DA+
Sbjct: 160 SQAIDAV 166
>gi|242238745|ref|YP_002986926.1| aspartate racemase [Dickeya dadantii Ech703]
gi|242130802|gb|ACS85104.1| aspartate racemase [Dickeya dadantii Ech703]
Length = 241
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 104/243 (42%), Gaps = 30/243 (12%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+GI+GG +T +LL K++ + E D P ++ + P + + + S L
Sbjct: 10 LGILGGMGPLATADLLQKIIAATPAERDQQHVPLVVWNVPQIPDRQRALAGTGPSPLPAL 69
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
GV L + GA I + C+ +H W D++ P LH+++
Sbjct: 70 RDGVS---------------RLNRLGASHIAIACNTAHHWFDDLQASSEAPLLHIADAAL 114
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
+L A S RIG++A + L AG+YQ++L G VLPD +E +P
Sbjct: 115 SQLTTAAPP-----SERRIGLIATHGTLAAGWYQQRLAERGMTPVLPDADELETLFVPGC 169
Query: 260 DALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPL----LKKCIDPMD 315
A+ R +V L + L R +ILA ++ P D + L++ ID
Sbjct: 170 YAVKRGEVAAGGRLFEQLAERLAERGAERLILACTEVA---PGLDAIRSRWLQRSIDTTQ 226
Query: 316 ALA 318
ALA
Sbjct: 227 ALA 229
>gi|227114857|ref|ZP_03828513.1| putative aspartate racemase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 238
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 125/252 (49%), Gaps = 28/252 (11%)
Query: 83 VGIVGGASVDSTLNLLGKLVQ---LSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+G++GG +T++LL K+++ S +++ P + + P + DR
Sbjct: 6 IGVLGGMGPLATVDLLHKIIEETPASRDQDHVPVVAWNVPQIP------DRQ-----QAL 54
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G + +++ +R+ L + IV+PC+ +H W D + + P +H+++
Sbjct: 55 AGTGESPLPMLLHAVRQ----LNRLSVSHIVVPCNTAHHWFDALAEESHAPLVHIADATL 110
Query: 200 KELKEANMKPLEA-GSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEHTLIP 257
+K P EA +P +IG++A + L AG+YQ++ + G E V+PD+ M +P
Sbjct: 111 YAIK----PPAEAKKAPQKIGLIATHGTLNAGWYQQRFAAQLGAETVVPDEQEMTTLFVP 166
Query: 258 ALDALNRKDVE-GARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKC-IDPMD 315
A+ R +++ G R L ++A Q L+ R ++LA ++ L + IDP
Sbjct: 167 GCYAVKRGELQHGGRLLDQLAAQ-LVARGAERLVLACTEVPPALETVSSRWRGISIDPTR 225
Query: 316 ALARSTIK-WVK 326
ALA++ ++ W++
Sbjct: 226 ALAQACVRIWLQ 237
>gi|157146318|ref|YP_001453637.1| hypothetical protein CKO_02076 [Citrobacter koseri ATCC BAA-895]
gi|157083523|gb|ABV13201.1| hypothetical protein CKO_02076 [Citrobacter koseri ATCC BAA-895]
Length = 239
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 110/254 (43%), Gaps = 31/254 (12%)
Query: 83 VGIVGGASVDSTLNLLGKLVQL---SGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+GI+GG +TL+L+ KL++ S ++ P ++ + P + DR +L
Sbjct: 7 LGILGGMGPLATLDLMHKLLRATPASSDQQQIPHVVWNVPQIA------DRQQ--ALAGT 58
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G L VE L R AGA IV+ C+ +H W++ + + P LH+ +
Sbjct: 59 GPSPLPQLLLGVEQLNR-------AGASHIVIACNTAHHWYEALAQHSDAPLLHIVDATL 111
Query: 200 K--ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIP 257
E KE P R+G++A L AG++Q G E V P + +P
Sbjct: 112 AVFEGKE---------KPRRVGLIATQGTLDAGWFQHGFASMGIESVQPTPEELRQWFVP 162
Query: 258 ALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPP-DDPLLKKCIDPMDA 316
A+ R ++ LL + Q L R ++LA ++ L P L IDP +A
Sbjct: 163 GCYAVKRGELRTGGELLSLQAQALRDRGAERLVLACTEVPVALAEVTSPHLAVSIDPAEA 222
Query: 317 LARSTIK-WVKSAE 329
LA+ + W+ E
Sbjct: 223 LAQQCARLWLTQRE 236
>gi|423118296|ref|ZP_17105980.1| aspartate racemase [Klebsiella oxytoca 10-5246]
gi|376402140|gb|EHT14740.1| aspartate racemase [Klebsiella oxytoca 10-5246]
Length = 235
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 103/240 (42%), Gaps = 25/240 (10%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+G++GG +TL+ +L+ + +ND P ++ + P + + S S L
Sbjct: 7 LGVLGGMGPLATLDFQRRLLDATPAQNDRQQIPSVVWNVPQIADRQKALAGSGPSPL--- 63
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
++ + + L +AGA I +PC+ +H W+D + + P LH+ +
Sbjct: 64 --------PQLIHGIEK----LNQAGASHIAIPCNTAHHWYDALSQVSDAPILHIVDAAI 111
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
L + KP R+G++A L AG+YQ +L +G EVV P + + +P
Sbjct: 112 AALAQQADKPQ------RVGIIATQGTLEAGWYQRQLAAQGVEVVEPTEQELARWFVPGC 165
Query: 260 DALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPP-DDPLLKKCIDPMDALA 318
A+ R +E LL L R +ILA ++ L P DP ALA
Sbjct: 166 YAVKRGALEEGGELLVRQANALFTRGAQKLILACTEVPVALAAVKAPFNDLTFDPAQALA 225
>gi|220922696|ref|YP_002497998.1| aspartate racemase [Methylobacterium nodulans ORS 2060]
gi|219947303|gb|ACL57695.1| aspartate racemase [Methylobacterium nodulans ORS 2060]
Length = 236
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 111/248 (44%), Gaps = 35/248 (14%)
Query: 83 VGIVGGASVDSTLNLLGKLVQ---LSGEENDFPFLLC---SDPLLNKELLSHDRSSFSSL 136
+G++GG +T++ +GK+VQ + +++ ++C + P +L F ++
Sbjct: 2 LGVLGGMGPMATVDFMGKVVQNTPAACDQDHIQVVVCMAANIPDRTAAILGEGTDPFPAM 61
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
R +LE AGA CI +PC+ +H WH + SV LH+ +
Sbjct: 62 ------------------RATVRWLETAGATCIAIPCNTAHHWHAALQAETSVRILHIVD 103
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
VA L AG IGVLA + + AG YQ++L GF PD A + ++
Sbjct: 104 AVADTL---------AGQGGCIGVLATSGTVKAGIYQKRLALRGFSCRTPDAAG-QAEVM 153
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKC-IDPMD 315
A+ + + A +LR + ++ V++A ++ L + L+ +D +
Sbjct: 154 RAIRLVKAGQLAEATTILRAQAEAMVAAGCRQVVMACTEIPVALATVNGALRSVLVDATE 213
Query: 316 ALARSTIK 323
ALA + ++
Sbjct: 214 ALACACVE 221
>gi|197335438|ref|YP_002156361.1| aspartate racemase [Vibrio fischeri MJ11]
gi|197316928|gb|ACH66375.1| aspartate racemase [Vibrio fischeri MJ11]
Length = 236
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 115/251 (45%), Gaps = 38/251 (15%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+GI+GG +T+ + K++ + ND P ++ S P + DR++F
Sbjct: 5 LGILGGMGPLATVEFMLKIISQTPAHNDQEHIPMVVSSVPQIP------DRTAF----IM 54
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G G D L+ LE++GA CIV+PC+ +H W+ ++ +V + + + V
Sbjct: 55 GHG---QDPY--PELKHSFEQLEQSGAECIVIPCNTAHYWYPQLSATSNVHTISIIDSVV 109
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
+E + K +G+LA A + A YQ+KL +V+ D T + ++ +
Sbjct: 110 QEAQARRYK--------TVGLLATTATMKARMYQQKLNQYNIDVIETDD-TQQRDVMQGI 160
Query: 260 DALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM------QDLLPPDDPLLKKCIDP 313
+ +VE + L+ + +L + VIL ++ Q+L P ++C+D
Sbjct: 161 YEVKAGNVEKGKALMLPVFKSMLAQGAEAVILGCTEIPVALAEQNLKQP-----QQCLDS 215
Query: 314 MDALARSTIKW 324
++ LA+ + W
Sbjct: 216 LEILAKCCVDW 226
>gi|14521575|ref|NP_127051.1| aspartate racemase [Pyrococcus abyssi GE5]
gi|5458794|emb|CAB50281.1| racD-1 aspartate racemase [Pyrococcus abyssi GE5]
gi|380742185|tpe|CCE70819.1| TPA: aspartate racemase [Pyrococcus abyssi GE5]
Length = 228
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 116/246 (47%), Gaps = 27/246 (10%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLS--GEENDFP-FLLCSDPLLNKELLSHDRSSFSSLN 137
+GI+GG +T+ + ++V+ + ++ D P ++ ++P + DR++F
Sbjct: 2 KVIGILGGMGPLATVEMFKRIVEKTPAKKDQDHPKIIIFNNPQI------PDRTAF---- 51
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
G G LI + LE+ GA I+MPC+ +H + +++ K +P + + E
Sbjct: 52 ILGKGEDPRPELIKTAKK-----LEECGADFIIMPCNTAHAFIEDIRKAIRIPIISMIEE 106
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIP 257
AK++KE K ++G+LA + +G Y+++ G EV++P + E +
Sbjct: 107 TAKKVKELGFK--------KVGLLATTGTIASGVYEKEFSKYGIEVLIPREDEQEEVMKG 158
Query: 258 ALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDAL 317
D + ++E + LL + L R +I ++ +L D L IDPMD +
Sbjct: 159 IYDGVKAGNLELGKELLIKIARKLEERGAECIIAGCTEVSVVLSEKD-LKVPLIDPMDVI 217
Query: 318 ARSTIK 323
A + +K
Sbjct: 218 AEAAVK 223
>gi|393768383|ref|ZP_10356923.1| aspartate racemase [Methylobacterium sp. GXF4]
gi|392726209|gb|EIZ83534.1| aspartate racemase [Methylobacterium sp. GXF4]
Length = 237
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 108/239 (45%), Gaps = 26/239 (10%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+G++GG +T + L KLV+ + D P L+CS + S++ +
Sbjct: 2 LGVLGGMGPLATADFLAKLVRATPARRDQDHIPTLICSAADIPNR--------ASAILGR 53
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G D L +R LE AGA I +PC+ +H WH + G ++P LH+ + VA
Sbjct: 54 G-----PDPL--PAMRAALARLETAGATRIAIPCNTAHHWHAALQAGTALPILHIVDAVA 106
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
+L + + AG P IG+LA L G Y E+L GF + PD + ++ A+
Sbjct: 107 DDLDASGL----AGGP--IGLLASAGTLRVGLYPERLARHGFTGLSPDP-DGQDAVVAAI 159
Query: 260 DALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPP-DDPLLKKCIDPMDAL 317
D + V A +L + L+ V++A ++ L DD L +D ++L
Sbjct: 160 DLVKAGRVAEAALILEAQARALVAAGCRRVVMACTEIPVALSALDDELAGVMVDATESL 218
>gi|423686316|ref|ZP_17661124.1| aspartate racemase [Vibrio fischeri SR5]
gi|371494384|gb|EHN69982.1| aspartate racemase [Vibrio fischeri SR5]
Length = 236
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 114/251 (45%), Gaps = 38/251 (15%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+GI+GG +T+ + K++ + ND P ++ S P + DR++F
Sbjct: 5 LGILGGMGPLATVEFMLKIISQTPAHNDQEHIPMVVSSVPQIP------DRTAF----IM 54
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G G D L+ LE++GA CIV+PC+ +H W+ ++ V + + + V
Sbjct: 55 GHG---QDPY--PELKHSFEQLEQSGAECIVIPCNTAHYWYPQLSATSHVHTISIIDSVV 109
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
+E + K +G+LA A + A YQ+KL EV+ D T + ++ +
Sbjct: 110 QEAQTRRYK--------TVGLLATTATMKARMYQQKLNQYHIEVIETDD-TQQCDVMQGI 160
Query: 260 DALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM------QDLLPPDDPLLKKCIDP 313
+ +VE + L+ + +L + VIL ++ Q+L P ++C+D
Sbjct: 161 YEVKAGNVEKGKALMLPVFESMLAQGAEAVILGCTEIPVALAEQNLKQP-----QQCLDS 215
Query: 314 MDALARSTIKW 324
++ LA+ + W
Sbjct: 216 LEILAKCCVDW 226
>gi|227327218|ref|ZP_03831242.1| putative aspartate racemase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 238
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 119/247 (48%), Gaps = 25/247 (10%)
Query: 83 VGIVGGASVDSTLNLLGKLVQ---LSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+G++GG +T++LL K+V+ S +++ P + + P + DR
Sbjct: 6 IGVLGGMGPLATVDLLHKIVEETPASRDQDHVPVVAWNVPQIP------DRQ-----QAL 54
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G + ++ +R+ L + IV+PC+ +H W D + + P LH+++
Sbjct: 55 AGTGESPLPTLLHAIRQ----LNRLSVSHIVVPCNTAHHWFDALTEASDAPLLHIADATL 110
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEHTLIPA 258
L + + SP +IG++A + L AG+YQ++ + G E V+P++ M +P
Sbjct: 111 HALTQVDKA---KASPRKIGLIATHGTLNAGWYQQRFAAQLGAETVVPNEQEMTTLFVPG 167
Query: 259 LDALNRKDVE-GARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKC-IDPMDA 316
A+ R +++ G R L ++A Q L+ R ++LA ++ L + IDP A
Sbjct: 168 CYAVKRGELQHGGRLLDQLAAQ-LVERGAERLVLACTEVPPALEAVSSRWRDISIDPTRA 226
Query: 317 LARSTIK 323
LA++ ++
Sbjct: 227 LAQACVR 233
>gi|50120467|ref|YP_049634.1| aspartate racemase [Pectobacterium atrosepticum SCRI1043]
gi|49610993|emb|CAG74438.1| putative aspartate racemase [Pectobacterium atrosepticum SCRI1043]
Length = 238
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 114/247 (46%), Gaps = 25/247 (10%)
Query: 83 VGIVGGASVDSTLNLLGKLVQ---LSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+G++GG +T++LL K+V+ S ++ P ++ + P + + + S L
Sbjct: 6 IGVLGGMGPLATVDLLHKIVEETPASRDQEHVPVIVWNVPQIPDRQQALAGTGESPLPTL 65
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
VQ + L V + IV+PC+ +H W D + + P +H+++
Sbjct: 66 LHAVQQLNRLSVSH---------------IVVPCNTAHHWFDALSETSHAPLVHIADATL 110
Query: 200 KELKEANMKPLEAGS-PLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEHTLIP 257
A +P+E P +IG++A + L AG+YQ++ + G E V+PD+ M +P
Sbjct: 111 ----HAITQPVETKKIPQKIGLIATHGTLNAGWYQQRFAAQLGVETVVPDEQEMTTLFVP 166
Query: 258 ALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKC-IDPMDA 316
A+ R +++ LL L+ R ++LA ++ L + IDP A
Sbjct: 167 GCYAVKRGELQHGGRLLEQLAARLVERGAERLVLACTEVPPALEAVSSRWRDISIDPTRA 226
Query: 317 LARSTIK 323
LA++ ++
Sbjct: 227 LAQACVR 233
>gi|300725002|ref|YP_003714327.1| aspartate racemase [Xenorhabdus nematophila ATCC 19061]
gi|297631544|emb|CBJ92251.1| putative aspartate racemase [Xenorhabdus nematophila ATCC 19061]
Length = 230
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 109/255 (42%), Gaps = 48/255 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLVQ---LSGEENDFPFLLCSDPLL---NKELLSHDRSSFSSL 136
+GI+GG +T++ + K+++ + ++ P + S P + +L+ S F+ +
Sbjct: 5 IGILGGMGPAATVDAMDKIIKNTPANCDQEHIPVIAVSFPDIPDRTASILAGGESPFNKM 64
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+ LR LE AGA CI+MPC+ +H W+DE+ +PFL++ E
Sbjct: 65 --------------LAALR----ILEAAGAECIIMPCNTAHYWYDELKASTKIPFLNIVE 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
++ + + +LA + G YQ++L+ E V+PD + ++
Sbjct: 107 VTCNKIVSEGIN--------NVAILATTGTIKIGLYQDRLRKENVNFVVPDD-IQQRIIM 157
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLL-------KK 309
++ A D E A L+ + L V I+ ++ PL+ K+
Sbjct: 158 ESILAYKSGDGEKAYQLIESVITQLKHVGVEHFIMGCTEI--------PLILSGCGDKKE 209
Query: 310 CIDPMDALARSTIKW 324
ID L R ++W
Sbjct: 210 YIDATGELVRKAVEW 224
>gi|338708058|ref|YP_004662259.1| aspartate racemase [Zymomonas mobilis subsp. pomaceae ATCC 29192]
gi|336294862|gb|AEI37969.1| aspartate racemase [Zymomonas mobilis subsp. pomaceae ATCC 29192]
Length = 242
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 119/252 (47%), Gaps = 28/252 (11%)
Query: 84 GIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
G++GG +TL+LL K++ + D P + + P + DR +L KG
Sbjct: 8 GVLGGMGPLATLDLLQKIIAATPANRDQDHLPVVSWNVPQIA------DRQK--ALAGKG 59
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH-VSECVA 199
DS + + L + L + IV+PC+ +H W+D + + P LH V E VA
Sbjct: 60 ------DSPLPQLLNGIKK-LNQLEVSHIVIPCNTAHHWYDSLAEASQAPILHIVDETVA 112
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
+ L L P +IG++A + L AG+YQ+K++ EV+ P + M+ +
Sbjct: 113 QIL-------LTYPYPQKIGLIATHGTLAAGWYQQKIRAADIEVIFPTEEEMDKLFVAGC 165
Query: 260 DALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQ-DLLPPDDPLLKKCIDPMDALA 318
A+ + ++ A +LL +L+ R ++LA ++ L L+ IDP + LA
Sbjct: 166 YAVKQGEMALAGDLLEKLAALLVKRGAEKLLLACTEVPLALAAHHSSFLEISIDPTEMLA 225
Query: 319 RSTIK-WVKSAE 329
++ +K W++
Sbjct: 226 KACVKLWLEEGH 237
>gi|59712154|ref|YP_204930.1| aspartate racemase [Vibrio fischeri ES114]
gi|59480255|gb|AAW86042.1| aspartate racemase [Vibrio fischeri ES114]
Length = 236
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 113/251 (45%), Gaps = 38/251 (15%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+GI+GG +T+ + K++ + ND P ++ S P + DR++F
Sbjct: 5 LGILGGMGPLATVEFMLKIISQTPAHNDQEHIPMVVSSVPQIP------DRTAF----IM 54
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G G D L+ LE++GA CIV+PC+ +H W+ ++ V + + + V
Sbjct: 55 GHG---QDPY--PELKHSFEQLERSGAECIVIPCNTAHYWYPQLSATSHVHTISIIDSVV 109
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
+E + K +G+LA A + A YQ+KL EV+ D + ++ +
Sbjct: 110 QEAQNRRYK--------TVGLLATTATMKARMYQQKLNQYHIEVIETDD-IQQRDVMQGI 160
Query: 260 DALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM------QDLLPPDDPLLKKCIDP 313
+ +VE + L+ + +L + VIL ++ Q+L P ++C+D
Sbjct: 161 YEVKAGNVEKGKALMLPVFESMLAQGAEAVILGCTEIPVALAEQNLKQP-----QQCLDS 215
Query: 314 MDALARSTIKW 324
++ LA+ + W
Sbjct: 216 LEILAKCCVDW 226
>gi|187478383|ref|YP_786407.1| aspartate racemase [Bordetella avium 197N]
gi|115422969|emb|CAJ49499.1| aspartate racemase [Bordetella avium 197N]
Length = 243
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 112/237 (47%), Gaps = 29/237 (12%)
Query: 98 LGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRK 157
L L S ++ P LL +DP + DRS+ GG +++ R
Sbjct: 27 LAALTPASVDQQHIPTLLLNDPRIP------DRSTARLF----GGADPWPAML-----RG 71
Query: 158 RVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLR 217
L +GAR I +PC+ +H+W++++ LH+ E VA++L+ + + G R
Sbjct: 72 IRMLNASGARAIAVPCNTAHLWYEQMAAASDCEVLHIIEAVAQDLRR---QGIHRG---R 125
Query: 218 IGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIA 277
IG++ A L+ G YQ+ L+ G+ ++P + ++ + ++ A+ +E +
Sbjct: 126 IGLMGTAATLSMGLYQQTLEKHGYTCIVPTEEEIDTLCMASIRAVKANQLEESFAPAVEC 185
Query: 278 LQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCI-----DPMDALARSTIKWVKSAE 329
+Q L R + V+L ++ +P L+K + D +DALA + I+ ++AE
Sbjct: 186 IQRLRTRGADAVVLGCTELPLAVPHA---LRKGLGIPLTDSIDALALAAIEHYQAAE 239
>gi|205355237|ref|YP_002229038.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|375126150|ref|ZP_09771314.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|205275018|emb|CAR40102.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|326630400|gb|EGE36743.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
Length = 240
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 109/252 (43%), Gaps = 35/252 (13%)
Query: 83 VGIVGGASVDSTLNLLGKLVQL---SGEENDFPFLLCSDPLLNKE---LLSHDRSSFSSL 136
+G GG +T ++L K V+L S ++ P ++ S P + LLS S +
Sbjct: 1 MGYWGGMGPAATADMLEKFVELRHASCDQQHIPLIVSSIPDIPDRTACLLSGGPSPY--- 57
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
L R LE AGA CIV+PC+ +H W D++ + + +
Sbjct: 58 ---------------RYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKARMISILD 102
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
++ S +G+LA NA L G YQ+K G ++ P++A + ++
Sbjct: 103 ATLGDIPP---------SARHVGLLATNATLATGLYQKKALARGLTLIQPEEAG-QALVM 152
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-KCIDPMD 315
A+ L R D A+ LL + L+ R +I+ ++ ++ + + ID
Sbjct: 153 QAIYTLKRGDKTVAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTA 212
Query: 316 ALARSTIKWVKS 327
+L R+ I+W +S
Sbjct: 213 SLVRAAIRWYES 224
>gi|399087897|ref|ZP_10753321.1| aspartate racemase [Caulobacter sp. AP07]
gi|398031867|gb|EJL25238.1| aspartate racemase [Caulobacter sp. AP07]
Length = 259
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 110/256 (42%), Gaps = 35/256 (13%)
Query: 83 VGIVGGASVDSTLNLLGKL---VQLSGEENDFPFLLCSD---PLLNKELLSHDRSSFSSL 136
+G++GG +TL+ LGKL +++ +P L S P +L H S ++
Sbjct: 29 IGVLGGMGPAATLDFLGKLQANTPADVDQDHWPVLTFSASQVPDRTAAILGHGESPLPAM 88
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
R L +AGA C +PC+ +H W DE+ + +H+ +
Sbjct: 89 ------------------REGLAMLARAGASCAAIPCNTAHHWFDELQASTDLTLVHIVD 130
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
VA ELK + P +G+LA + A YQ +L G A + ++
Sbjct: 131 AVASELKARRL-------PGSVGLLATTGTVQARIYQRRLDAHGIAT---RTARDQAAVM 180
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKC-IDPMD 315
A++ + ++ A + ++ LL + V+L ++ L P P L+ ID D
Sbjct: 181 RAIEDIKAGRLDRALPAVIGQVRELLDAGCDAVVLGCTELPLLAPDFPPALRAVSIDTTD 240
Query: 316 ALARSTIKWVKSAEKG 331
ALAR+ ++ + + +G
Sbjct: 241 ALARACLRTIDAIARG 256
>gi|33603524|ref|NP_891084.1| aspartate/glutamate racemase [Bordetella bronchiseptica RB50]
gi|412341153|ref|YP_006969908.1| aspartate/glutamate racemase [Bordetella bronchiseptica 253]
gi|427816534|ref|ZP_18983598.1| putative aspartate/glutamate racemase [Bordetella bronchiseptica
1289]
gi|33577648|emb|CAE34913.1| putative aspartate/glutamate racemase [Bordetella bronchiseptica
RB50]
gi|408770987|emb|CCJ55786.1| putative aspartate/glutamate racemase [Bordetella bronchiseptica
253]
gi|410567534|emb|CCN25105.1| putative aspartate/glutamate racemase [Bordetella bronchiseptica
1289]
Length = 244
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 126/262 (48%), Gaps = 44/262 (16%)
Query: 79 QANTVGIVGGASVDSTLNLLGKLVQLSG---EENDFPFLLCSDPLLNKELLSHDRSSFSS 135
+ +G++GG + + + +LV L+ ++ P +L +DP + DR + S
Sbjct: 10 EGRFLGVLGGMGPMAGASFMQRLVALTEAACDQQHVPAILWNDPRVP------DRPAGQS 63
Query: 136 LNCKGGGVQLDDSL--IVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
G G D L + +RR LE+AGA I +PC+ +H+W+ ++ + SVP LH
Sbjct: 64 ----GQGA---DPLPWMRHGIRR----LEQAGAAAIAIPCNTAHVWYPQLAQSASVPVLH 112
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ E V +L+ + AG R+G+LA L G YQ ++ +G+E V+P
Sbjct: 113 IVEAVLDDLRRQG---IHAG---RVGLLATATTLRLGLYQHEMLAQGYEPVVPPV----- 161
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLL-----VRA--VNTVILASDDMQDLLPP--DD 304
LI L A + + V+ +NLL AL L +RA V+ ++L ++ LP
Sbjct: 162 DLIDGLCAQSIRLVK--QNLLPQALPPALACIDSLRAMGVDAIVLGCTELPLALPHALRA 219
Query: 305 PLLKKCIDPMDALARSTIKWVK 326
L D +DALA + + W +
Sbjct: 220 ELGVAMTDSIDALALAGLAWYR 241
>gi|427820029|ref|ZP_18987092.1| putative aspartate/glutamate racemase [Bordetella bronchiseptica
D445]
gi|427822618|ref|ZP_18989680.1| putative aspartate/glutamate racemase [Bordetella bronchiseptica
Bbr77]
gi|410571029|emb|CCN19237.1| putative aspartate/glutamate racemase [Bordetella bronchiseptica
D445]
gi|410587883|emb|CCN02931.1| putative aspartate/glutamate racemase [Bordetella bronchiseptica
Bbr77]
Length = 244
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 126/262 (48%), Gaps = 44/262 (16%)
Query: 79 QANTVGIVGGASVDSTLNLLGKLVQLSG---EENDFPFLLCSDPLLNKELLSHDRSSFSS 135
+ +G++GG + + + +LV L+ ++ P +L +DP + DR + S
Sbjct: 10 EGRFLGVLGGMGPMAGASFMQRLVALTEAACDQQHVPAILWNDPRVP------DRPAGQS 63
Query: 136 LNCKGGGVQLDDSL--IVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
G G D L + +RR LE+AGA I +PC+ +H+W+ ++ + SVP LH
Sbjct: 64 ----GQGA---DPLPWMRHGIRR----LEQAGAAAIAIPCNTAHVWYPQLAQSASVPVLH 112
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ E V +L+ + AG R+G+LA L G YQ ++ +G+E V+P
Sbjct: 113 IVEAVLDDLRRQG---IHAG---RVGLLATATTLRLGLYQHEMLAQGYEPVVPPV----- 161
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLL-----VRA--VNTVILASDDMQDLLPP--DD 304
LI L A + + V+ +NLL AL L +RA V+ ++L ++ LP
Sbjct: 162 DLIDGLCAQSIRLVK--QNLLPQALPPALACIDSLRAMGVDAIVLGCTELPLALPHALRA 219
Query: 305 PLLKKCIDPMDALARSTIKWVK 326
L D +DALA + + W +
Sbjct: 220 ELGVAMTDSIDALALAGLAWYR 241
>gi|33591318|ref|NP_878962.1| aspartate/glutamate racemase [Bordetella pertussis Tohama I]
gi|384202606|ref|YP_005588345.1| putative aspartate/glutamate racemase [Bordetella pertussis CS]
gi|408416984|ref|YP_006627691.1| aspartate/glutamate racemase [Bordetella pertussis 18323]
gi|33570960|emb|CAE40431.1| putative aspartate/glutamate racemase [Bordetella pertussis Tohama
I]
gi|332380720|gb|AEE65567.1| putative aspartate/glutamate racemase [Bordetella pertussis CS]
gi|401779154|emb|CCJ64641.1| putative aspartate/glutamate racemase [Bordetella pertussis 18323]
Length = 244
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 126/262 (48%), Gaps = 44/262 (16%)
Query: 79 QANTVGIVGGASVDSTLNLLGKLVQLSG---EENDFPFLLCSDPLLNKELLSHDRSSFSS 135
+ +G++GG + + + +LV L+ ++ P +L +DP + DR + S
Sbjct: 10 EGRFLGVLGGMGPMAGASFMQRLVALTEAACDQQHVPAILWNDPRVP------DRPAGQS 63
Query: 136 LNCKGGGVQLDDSL--IVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
G G D L + +RR LE+AGA I +PC+ +H+W+ ++ + SVP LH
Sbjct: 64 ----GQGA---DPLPWMRHGIRR----LEQAGATAIAIPCNTAHVWYPQLAQSASVPVLH 112
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ E V +L+ + AG R+G+LA L G YQ ++ +G+E V+P
Sbjct: 113 IVEAVLDDLRRQG---IHAG---RVGLLATATTLRLGLYQHEMLAQGYEPVVPPV----- 161
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLL-----VRA--VNTVILASDDMQDLLPP--DD 304
LI L A + + V+ +NLL AL L +RA V+ ++L ++ LP
Sbjct: 162 DLIDGLCAQSIRLVK--QNLLPQALPPALACIDSLRAMGVDAIVLGCTELPLALPHALRA 219
Query: 305 PLLKKCIDPMDALARSTIKWVK 326
L D +DALA + + W +
Sbjct: 220 ELGVAMTDSIDALALAGLGWYR 241
>gi|91790218|ref|YP_551170.1| aspartate racemase [Polaromonas sp. JS666]
gi|91699443|gb|ABE46272.1| aspartate racemase [Polaromonas sp. JS666]
Length = 241
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 104/220 (47%), Gaps = 24/220 (10%)
Query: 80 ANTVGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSL 136
A +G++GG + +L L+ ++D P LL +DP + DRS F+
Sbjct: 2 APMLGVLGGMGPAAGAYFAYRLALLTDVQSDQEHLPVLLINDPKIP------DRSEFA-- 53
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
G G+ + +RR FLE +G C V+PC+ +H W+ ++ +P +H+
Sbjct: 54 --LGRGLS-----PMPAMRRNLQFLESSGCSCAVIPCNTAHYWYPDLQMSVKMPLIHIVS 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
V + L + + ++ G RIG+L A + +G Y++KL + G+ V+ + + +
Sbjct: 107 SVVENL---HARGIDGG---RIGLLGTPATVNSGLYKDKLTNAGYTVLPYTEDDVLQLCV 160
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
+ A+ + + A L +++VL R VIL ++
Sbjct: 161 RPIQAVKQNRLREAGTALADSVRVLYDRGATAVILGCTEL 200
>gi|271501156|ref|YP_003334181.1| aspartate racemase [Dickeya dadantii Ech586]
gi|270344711|gb|ACZ77476.1| aspartate racemase [Dickeya dadantii Ech586]
Length = 238
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 108/249 (43%), Gaps = 34/249 (13%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLL---NKELLSHDRSSFSSL 136
+GI+GG +T++ + KL++ + D P + S P + + +L+H S +
Sbjct: 5 IGILGGMGPGATVDAMQKLIRQTPARKDQEHIPMIAVSIPDIPDRTQCILNHSPSPLKKM 64
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+E +R LE AGA CI++PC+ +H W +++ + V + + +
Sbjct: 65 --------------IEYMR----ILENAGATCIIIPCNTAHYWFEDLKRHTQVDMISIID 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
+++ E + +G+LA A + YQ L + LPD A + ++
Sbjct: 107 AACQQVAEQRVH--------HVGILATTATVRGNIYQHALSGQQVRSTLPDDA-QQQAVM 157
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPD-DPLLKKCIDPMD 315
++ A D +R LL + L + V +IL ++ +L + +D D
Sbjct: 158 NSIYAYKAGDFSQSRALLLPVVDSLRQQGVEKIILGCTELPLILEAEVSATPDAYLDATD 217
Query: 316 ALARSTIKW 324
AL + TI W
Sbjct: 218 ALIKQTIAW 226
>gi|1545809|dbj|BAA12209.1| aspartate racemase [Desulfurococcus sp. SY]
Length = 235
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 115/247 (46%), Gaps = 30/247 (12%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEEND--FP-FLLCSDPLLNKELLSHDRSSFSSLN 137
+GI+GG +T L ++V+ + + D P ++ ++P + DR+++
Sbjct: 4 RVIGILGGMGPLATAELFRRIVEKTPAKRDQEHPRIIIYNNPKIP------DRTAY---- 53
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
G G LI N RK LE GA I+MPC+ +H + +++ K +P + + E
Sbjct: 54 ILGRGEDPRPELI--NSARK---LESWGADFIIMPCNTAHFFAEDIQKAIRIPLVSMVEE 108
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIP 257
A+ +KE ++ ++G+LA + + Y L G +V PD+ E +
Sbjct: 109 TAERVKEMGLR--------KVGLLATDGTIKGLVYHRALLKRGIAIVTPDRTGQELVMEG 160
Query: 258 ALDALNRKDVEGARN-LLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDA 316
+ +V R LLR+A + L + V+ +I ++ L PDD L IDPMD
Sbjct: 161 IYRGVKAGNVAYGRELLLRVAKK--LEKRVDGIIAGCTEVSVALKPDD-LSVPLIDPMDV 217
Query: 317 LARSTIK 323
+A ++K
Sbjct: 218 IAEKSVK 224
>gi|410422000|ref|YP_006902449.1| aspartate/glutamate racemase [Bordetella bronchiseptica MO149]
gi|408449295|emb|CCJ60983.1| putative aspartate/glutamate racemase [Bordetella bronchiseptica
MO149]
Length = 244
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 126/262 (48%), Gaps = 44/262 (16%)
Query: 79 QANTVGIVGGASVDSTLNLLGKLVQLSG---EENDFPFLLCSDPLLNKELLSHDRSSFSS 135
+ +G++GG + + + +LV L+ ++ P +L +DP + DR + S
Sbjct: 10 EGRFLGVLGGMGPMAGASFMQRLVALTEAACDQQHVPAILWNDPRVP------DRPAGQS 63
Query: 136 LNCKGGGVQLDDSL--IVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
G G D L + +RR LE+AGA I +PC+ +H+W+ ++ + +VP LH
Sbjct: 64 ----GQGA---DPLPWMRHGIRR----LEQAGAAAIAIPCNTAHVWYPQLAQSANVPVLH 112
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ E V +L+ + AG R+G+LA L G YQ ++ +G+E V+P
Sbjct: 113 IVEAVLDDLRRQG---IHAG---RVGLLATATTLRLGLYQHEMLAQGYEPVVPPV----- 161
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLL-----VRA--VNTVILASDDMQDLLPP--DD 304
LI L A + + V+ +NLL AL L +RA V+ ++L ++ LP
Sbjct: 162 DLIDGLCAQSIRLVK--QNLLPQALPPALACIDSLRAMGVDAIVLGCTELPLALPHALRA 219
Query: 305 PLLKKCIDPMDALARSTIKWVK 326
L D +DALA + + W +
Sbjct: 220 ELGVAMTDSIDALALAGLAWYR 241
>gi|387770057|ref|ZP_10126248.1| aspartate racemase [Pasteurella bettyae CCUG 2042]
gi|386905404|gb|EIJ70172.1| aspartate racemase [Pasteurella bettyae CCUG 2042]
Length = 230
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 109/250 (43%), Gaps = 32/250 (12%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSG---EENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+GI+GG +T+++ K +QL+ ++ P L+ S P + DR++ N
Sbjct: 6 IGILGGMGPAATMDMFQKFIQLTPATCDQEHIPLLISSIPDIP------DRTTCILHNGA 59
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G +++E +R LE AGA CI++ C+ +H W DE+ K +V + + E A
Sbjct: 60 NPG-----PILIEQAKR----LESAGANCIIIACNTAHNWFDEIHKQVNVEMISMIESTA 110
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
K RIG+LA +A L G Y++K++ + + PD + +
Sbjct: 111 DAAVSTGKK--------RIGILATDATLETGLYKKKIEEFNLDYIAPDPDSQTQVMHSIY 162
Query: 260 DALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPD---DPLLKKCIDPMDA 316
K E +++ L+ + +IL ++ +L D P L +D
Sbjct: 163 LYKAGKIAESTEIMMK-QKDALIKKGAEIIILGCTEVPMILMTDINISPELY--VDSTLC 219
Query: 317 LARSTIKWVK 326
L +S I W +
Sbjct: 220 LVKSAINWYR 229
>gi|375260540|ref|YP_005019710.1| aspartate racemase [Klebsiella oxytoca KCTC 1686]
gi|397657634|ref|YP_006498336.1| Aspartate racemase [Klebsiella oxytoca E718]
gi|365910018|gb|AEX05471.1| aspartate racemase [Klebsiella oxytoca KCTC 1686]
gi|394346058|gb|AFN32179.1| Aspartate racemase [Klebsiella oxytoca E718]
Length = 239
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 105/254 (41%), Gaps = 31/254 (12%)
Query: 83 VGIVGGASVDSTLNLLGKLVQL---SGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+GI+GG +TL+L+ KL++ S ++ P ++ + P + DR
Sbjct: 7 LGILGGMGPLATLDLMHKLLRATPASSDQQQIPHVVWNVPQIA------DRQR----ALA 56
Query: 140 GGGVQLDDSLI--VENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
G G L+ VE L R G I + C+ +H W++ + + P LH+ +
Sbjct: 57 GTGPSPLPQLLYGVEQLNR-------VGVSHIAIACNTAHHWYEALAQHSDAPLLHIVDA 109
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIP 257
P R+G++A L AG++Q G E V P + + +P
Sbjct: 110 TLAVFDGKE-------KPRRVGIIATQGTLDAGWFQHGFTAMGIESVQPTQEELRQWFVP 162
Query: 258 ALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPP-DDPLLKKCIDPMDA 316
A+ R ++ LL + Q L R ++LA ++ L P L IDP +A
Sbjct: 163 GCYAVKRGELRTGGELLSLQAQALRDRGAERLVLACTEVPVALAEVTSPHLAVSIDPAEA 222
Query: 317 LARSTIK-WVKSAE 329
LAR + W+ E
Sbjct: 223 LARQCARLWLAQRE 236
>gi|209695461|ref|YP_002263390.1| aspartate racemase [Aliivibrio salmonicida LFI1238]
gi|208009413|emb|CAQ79689.1| aspartate racemase [Aliivibrio salmonicida LFI1238]
Length = 237
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 113/256 (44%), Gaps = 38/256 (14%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+GI+GG +T+ + K++ + ND P ++ S P + DR++F
Sbjct: 5 LGILGGMGPLATVEFMMKIITQTPAHNDQEHIPMVVSSVPQIP------DRTAF----IM 54
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G G L+ LE++GA CIV+PC+ +H W+ ++ V + + + V
Sbjct: 55 GHGTDP-----YPELKHSFDQLEQSGAECIVIPCNTAHYWYPQLSATSHVHTISIIDSVV 109
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
+E + K +G+LA A + YQ+KL +V+ D + ++ +
Sbjct: 110 QETQLRKHK--------IVGLLATTATMKTKMYQQKLNQYNIDVIETDD-LQQQAVMAGI 160
Query: 260 DALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM------QDLLPPDDPLLKKCIDP 313
+ +VE + ++ + +L + VI ++ Q++ P K+C+D
Sbjct: 161 YEVKAGNVEKGKAMMLPVFEDMLAQGAEAVIFGCTEIPVALAEQNMNSP-----KQCLDS 215
Query: 314 MDALARSTIKWVKSAE 329
++ LA+ ++W AE
Sbjct: 216 LEILAKYCVEWSYEAE 231
>gi|440288149|ref|YP_007340914.1| aspartate racemase [Enterobacteriaceae bacterium strain FGI 57]
gi|440047671|gb|AGB78729.1| aspartate racemase [Enterobacteriaceae bacterium strain FGI 57]
Length = 238
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 109/242 (45%), Gaps = 28/242 (11%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+G++GG +T++ + KL++ + +D P ++ + P + + S L
Sbjct: 7 LGVLGGMGPLATVDFMHKLLRATPATHDQQQIPHVVWNVPQIADRQRALAGEGPSPLPQL 66
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G+Q L + G IV+ C+ +H W++ + + P LH+++
Sbjct: 67 LHGIQQ---------------LNRLGVSHIVIACNTAHHWYEALKQESDAPILHIADATL 111
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
+ +++ P ++G++A L AG++Q++ G E +LP + + +P
Sbjct: 112 EAIED---------KPKKVGLIATQGTLDAGWFQQRFAAIGTESLLPTQDEITRWFVPGC 162
Query: 260 DALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPP-DDPLLKKCIDPMDALA 318
A+ R D++ LL + + L R ++LA ++ L P L + IDP +ALA
Sbjct: 163 YAVKRGDLQQGGELLTLQARALRERGAEKLVLACTEVPVALAAISSPYLNEAIDPAEALA 222
Query: 319 RS 320
+
Sbjct: 223 QQ 224
>gi|307130300|ref|YP_003882316.1| aspartate racemase [Dickeya dadantii 3937]
gi|306527829|gb|ADM97759.1| Probable aspartate racemase [Dickeya dadantii 3937]
Length = 238
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 110/251 (43%), Gaps = 38/251 (15%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLL---NKELLSHDRSSFSSL 136
VGI+GG +T++ + KL++ + D P + S P + + +L+H S +
Sbjct: 5 VGILGGMGPGATVDAMQKLIRQTPARKDQEHIPMIAVSIPDIPDRTQCILNHSVSPLQKM 64
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
VE ++ LE AGA CI++PC+ +H W +++ + + + + +
Sbjct: 65 --------------VEYMK----ILENAGASCIIIPCNTAHYWFEDLKRHTQLEMISIID 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
+++ E ++ + +LA A + YQ L + LP + ++
Sbjct: 107 ATCQQVAEQRVR--------HVAILATTATVRGEIYQHALAGQQVRCTLPTD-EQQDAVM 157
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPD---DPLLKKCIDP 313
++ A DV AR LL + L R V +IL ++ +L P+ +P +D
Sbjct: 158 NSIYAYKAGDVAQARALLLPVVASLRQRGVEKIILGCTELPLILEPEAVAEP--DAYLDA 215
Query: 314 MDALARSTIKW 324
DAL + TI W
Sbjct: 216 TDALIKKTIAW 226
>gi|354598292|ref|ZP_09016309.1| aspartate racemase [Brenneria sp. EniD312]
gi|353676227|gb|EHD22260.1| aspartate racemase [Brenneria sp. EniD312]
Length = 244
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 113/251 (45%), Gaps = 33/251 (13%)
Query: 83 VGIVGGASVDSTLNLLGKLVQ---LSGEENDFPFLLCSDPLL---NKELLSHDRSSFSSL 136
+G++GG +T++LL K+++ +S +++ P + + P + + L S +L
Sbjct: 11 IGVLGGMGPLATVDLLQKIIEETPVSRDQDHVPVVAWNVPQIPDRQQALAGTGESPLPAL 70
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
VE L R A IV+PC+ +H W D + + P +H+++
Sbjct: 71 LAA-----------VEQLNR-------LSASHIVIPCNTAHHWFDALAQKSEAPLIHIAD 112
Query: 197 CV---AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ L + K L +IG++A L AG+YQ++ G E + PD+ +
Sbjct: 113 ATLASVEYLVKNRAKVLR-----KIGLIATRGTLDAGWYQQRFAALGAETLEPDEQELAT 167
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPP-DDPLLKKCID 312
+P A+ R +++ LL Q L+ R ++LA ++ L + L +D
Sbjct: 168 LFVPGCYAVKRGELQQGGYLLEQLAQRLIDRGAEWLVLACTEVPPALAAINSRWLDISLD 227
Query: 313 PMDALARSTIK 323
P ALAR+ ++
Sbjct: 228 PTRALARACVR 238
>gi|33598574|ref|NP_886217.1| aspartate/glutamate racemase [Bordetella parapertussis 12822]
gi|33574703|emb|CAE39360.1| putative aspartate/glutamate racemase [Bordetella parapertussis]
Length = 244
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 122/257 (47%), Gaps = 41/257 (15%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
+G +G + S + L L + + ++ P +L +DP + DR + S G
Sbjct: 15 GVLGSMGPMAGASFMQRLVALTEAACDQQHVPAILWNDPRVP------DRPAGQS----G 64
Query: 141 GGVQLDDSL--IVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
G D L + +RR LE+AGA I +PC+ +H+W+ ++ + SVP LH+ E V
Sbjct: 65 QGA---DPLPWMRHGIRR----LEQAGAAAIAIPCNTAHVWYPQLAQSASVPVLHIVEAV 117
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPA 258
+L+ + AG R+G+LA L G YQ ++ +G+E V+P LI
Sbjct: 118 LDDLRRQG---IHAG---RVGLLATATTLRLGLYQHEMLAQGYEPVVPPV-----DLIDG 166
Query: 259 LDALNRKDVEGARNLLRIALQVLL-----VRA--VNTVILASDDMQDLLPP--DDPLLKK 309
L A + + V+ +NLL AL L +RA V+ ++L ++ LP L
Sbjct: 167 LCAQSIRLVK--QNLLPQALPPALACIDSLRAMGVDAIVLGCTELPLALPHALRAELGVA 224
Query: 310 CIDPMDALARSTIKWVK 326
D +DALA + + W +
Sbjct: 225 MTDSIDALALAGLAWYR 241
>gi|385871288|gb|AFI89808.1| Aspartate racemase [Pectobacterium sp. SCC3193]
Length = 238
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 116/249 (46%), Gaps = 29/249 (11%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+G++GG +T++LL K+V+ + D P ++ + P + + + S L
Sbjct: 6 IGVLGGMGPLATVDLLYKIVEETPARRDQDHVPVVVWNVPQIPDRQQALAGTGESPLPTL 65
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
+Q + L V + IV+PC+ +H W D + + P +H+++
Sbjct: 66 LNAIQQLNRLSVSH---------------IVVPCNTAHHWFDALAEASHAPLVHIADATL 110
Query: 200 KELKEANMKPL--EAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEHTLI 256
+ PL E P +IG++A + L AG+YQ++ + G E V+P++ M +
Sbjct: 111 HAI-----TPLVEEKEVPQKIGLIATHGTLNAGWYQQRFTTQLGAETVVPNEQEMTTLFV 165
Query: 257 PALDALNRKDVE-GARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKC-IDPM 314
P A+ R +++ G R L + A Q L+ R ++LA ++ L + IDP
Sbjct: 166 PGCYAVKRGELQHGGRLLEQFAAQ-LVERGAERLVLACTEVPPALEAVSSRWRDISIDPT 224
Query: 315 DALARSTIK 323
ALA++ ++
Sbjct: 225 RALAQACVR 233
>gi|452121774|ref|YP_007472022.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
gi|451910778|gb|AGF82584.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
Length = 234
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 104/242 (42%), Gaps = 35/242 (14%)
Query: 93 STLNLLGKLVQL---SGEENDFPFLLCSDPLLNKE---LLSHDRSSFSSLNCKGGGVQLD 146
+T ++L K V+L S ++ P ++ S P + LLS S F
Sbjct: 5 ATADMLEKFVELRHASCDQQHIPLIVSSIPDIPDRTACLLSGGPSPF------------- 51
Query: 147 DSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEAN 206
L R LE AGA CIV+PC+ +H W D++ + + + ++
Sbjct: 52 -----RYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKARMISILDATLGDIPP-- 104
Query: 207 MKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKD 266
S +G+LA NA L G YQ+K G ++ P+ A + ++ A+ L R D
Sbjct: 105 -------SARHVGLLATNATLATGLYQKKALARGLTLIQPEDAG-QALVMQAIYTLKRGD 156
Query: 267 VEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-KCIDPMDALARSTIKWV 325
A+ LL + L+ R +I+ ++ ++ + + ID +L R+ I+W
Sbjct: 157 KTAAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLVRAAIRWY 216
Query: 326 KS 327
+S
Sbjct: 217 ES 218
>gi|410474606|ref|YP_006897887.1| aspartate/glutamate racemase [Bordetella parapertussis Bpp5]
gi|408444716|emb|CCJ51484.1| putative aspartate/glutamate racemase [Bordetella parapertussis
Bpp5]
Length = 244
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 127/262 (48%), Gaps = 44/262 (16%)
Query: 79 QANTVGIVGGASVDSTLNLLGKLVQLSG---EENDFPFLLCSDPLLNKELLSHDRSSFSS 135
+ +G++GG + + + +LV L+ ++ P +L +DP + DR + S
Sbjct: 10 EGRFLGVLGGMGPMAGASFMQRLVALTEAACDQQHVPAILWNDPRVP------DRPAGQS 63
Query: 136 LNCKGGGVQLDDSL--IVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
G G D L + +RR LE+AGA I +PC+ +H+W+ ++ + +VP LH
Sbjct: 64 ----GQGA---DPLPWMRHGIRR----LEQAGAAAIAIPCNTAHVWYPQLAQSANVPVLH 112
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ E V +L+ + + AG R+G+LA L G YQ ++ +G+E V+P
Sbjct: 113 IVEAVLDDLR---CQGIHAG---RVGLLATATTLRLGLYQHEMLAQGYEPVVPPV----- 161
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLL-----VRA--VNTVILASDDMQDLLPP--DD 304
LI L A + + V+ +NLL AL L +RA V+ ++L ++ LP
Sbjct: 162 DLIDGLCAQSIRLVK--QNLLPQALPPALACIDSLRAMGVDAIVLGCTELPLALPHALRA 219
Query: 305 PLLKKCIDPMDALARSTIKWVK 326
L D +DALA + + W +
Sbjct: 220 ELGVAMTDSIDALALAGLAWYR 241
>gi|418824052|ref|ZP_13379436.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22462]
gi|392825148|gb|EJA80904.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22462]
Length = 234
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 11/175 (6%)
Query: 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAG 213
L R LE AGA CIV+PC+ +H W D++ + + + ++
Sbjct: 54 LERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKARMISILDATLGDIPP--------- 104
Query: 214 SPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNL 273
S +G+LA NA L G YQ+K G ++ P++A + ++ A+ L R D A+ L
Sbjct: 105 SARHVGLLATNATLATGLYQKKALARGLTLIQPEEAG-QALVMQAIYTLKRGDKTAAQAL 163
Query: 274 LRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-KCIDPMDALARSTIKWVKS 327
L + L+ R +I+ ++ ++ + + ID +L R+ I+W +S
Sbjct: 164 LLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLVRAAIRWYES 218
>gi|14590552|ref|NP_142620.1| aspartate racemase [Pyrococcus horikoshii OT3]
gi|21465704|pdb|1JFL|A Chain A, Crystal Structure Determination Of Aspartate Racemase From
An Archaea
gi|21465705|pdb|1JFL|B Chain B, Crystal Structure Determination Of Aspartate Racemase From
An Archaea
gi|3257078|dbj|BAA29761.1| 228aa long hypothetical aspartate racemase [Pyrococcus horikoshii
OT3]
Length = 228
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 112/246 (45%), Gaps = 27/246 (10%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDF---PFLLCSDPLLNKELLSHDRSSFSSLN 137
T+GI+GG +T L ++V + + D ++ ++P + DR+++
Sbjct: 2 KTIGILGGMGPLATAELFRRIVIKTPAKRDQEHPKVIIFNNPQIP------DRTAY---- 51
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
G G LI R LE+ GA I+MPC+ +H + +++ K +P + + E
Sbjct: 52 ILGKGEDPRPQLIWTAKR-----LEECGADFIIMPCNTAHAFVEDIRKAIKIPIISMIEE 106
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIP 257
AK++KE K + G+LA + +G Y+++ G E++ P + + +
Sbjct: 107 TAKKVKELGFK--------KAGLLATTGTIVSGVYEKEFSKYGVEIMTPTEDEQKDVMRG 158
Query: 258 ALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDAL 317
+ + +++ R LL ++L R +I ++ +L DD L IDPMD +
Sbjct: 159 IYEGVKAGNLKLGRELLLKTAKILEERGAECIIAGCTEVSVVLKQDD-LKVPLIDPMDVI 217
Query: 318 ARSTIK 323
A +K
Sbjct: 218 AEVAVK 223
>gi|422014409|ref|ZP_16361021.1| aspartate racemase [Providencia burhodogranariea DSM 19968]
gi|414101061|gb|EKT62666.1| aspartate racemase [Providencia burhodogranariea DSM 19968]
Length = 244
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 25/250 (10%)
Query: 84 GIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
G++GG +TL+LL K+++++ + D P + + P + DR + G
Sbjct: 8 GVLGGMGPLATLDLLQKIIEITPAKRDQEHLPVVTWNVPQIP------DRQKAYA----G 57
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
G DS + E L L K I +PC+ H W+ ++ + LH+ + +
Sbjct: 58 TG----DSPLPELLHAIEQ-LNKLNVSYIAIPCNTVHYWYPQLAQASKASILHIVDIATE 112
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALD 260
+ A+++P P ++G++A L G YQ++L G E ++ + + IP
Sbjct: 113 YI--ASLQP----RPKKVGIIATKVTLDTGMYQQRLAKLGIEAIILSEHELNELFIPGCY 166
Query: 261 ALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPP-DDPLLKKCIDPMDALAR 319
A+ R + L + L+ R +IL ++ L D PLL IDP ALA
Sbjct: 167 AVKRGENVLGGELFQELATALIDRGAEKLILGCTEIPVALKTIDSPLLSLSIDPAYALAE 226
Query: 320 STIKWVKSAE 329
+K + A+
Sbjct: 227 HCVKLWQQAQ 236
>gi|213029645|ref|ZP_03344092.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 199
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 11/175 (6%)
Query: 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAG 213
L R LE AGA CIV+PC+ +H W D++ + + + ++
Sbjct: 19 LERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKARMISILDATLGDIPP--------- 69
Query: 214 SPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNL 273
S +G+LA NA L G YQ+K G ++ P+ A + ++ A+ L R D A+ L
Sbjct: 70 SARHVGLLATNATLATGLYQKKALARGLTLIQPEDAG-QALVMQAIYTLKRGDKTAAQAL 128
Query: 274 LRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-KCIDPMDALARSTIKWVKS 327
L + L+ R +I+ ++ ++ + + ID +L R+ I+W +S
Sbjct: 129 LLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLVRAAIRWYES 183
>gi|126649551|ref|ZP_01721792.1| aspartate racemase [Bacillus sp. B14905]
gi|126593876|gb|EAZ87799.1| aspartate racemase [Bacillus sp. B14905]
Length = 233
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 19/182 (10%)
Query: 79 QANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
+ T+GI+GG +T+ + +V+ + + D L +++ + DR++F N
Sbjct: 2 KKQTLGIIGGVGPLATMFIGEMIVRRTKAQKDQEHL---HTIIDNDTNIPDRTAFILDNT 58
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
K V +I+E+ ++ L GA I +PC+ +H ++DE+ +G +P LH+
Sbjct: 59 KENPV----PVIIEDAKK----LASVGADMIAIPCNTAHTFYDEIQEGSPIPVLHM---- 106
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPA 258
++E + E G+ R+G+LA LT+ YQ+ L+ G V+PD H +
Sbjct: 107 ---IRETAKRASELGAE-RVGILATTGTLTSRMYQDALEEYGITPVVPDNEMRAHVMTII 162
Query: 259 LD 260
D
Sbjct: 163 YD 164
>gi|421080724|ref|ZP_15541642.1| putative aspartate racemase [Pectobacterium wasabiae CFBP 3304]
gi|401704736|gb|EJS94941.1| putative aspartate racemase [Pectobacterium wasabiae CFBP 3304]
Length = 238
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 113/247 (45%), Gaps = 25/247 (10%)
Query: 83 VGIVGGASVDSTLNLLGKLVQ---LSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+G++GG +T++LL K+V+ S +++ P ++ + P + + + S L
Sbjct: 6 IGVLGGMGPLATVDLLHKIVEETPASRDQDHVPVVVWNVPQIPDRQQALAGTGESPLPTL 65
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
+Q + L V + IV+PC+ +H W D + + P +H+++
Sbjct: 66 LSAIQQLNRLSVSH---------------IVVPCNTAHYWFDALAEASYAPLVHIADATL 110
Query: 200 KELKEANMKPLEA-GSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEHTLIP 257
A P E +P +IG++A + L AG+YQ++ + G E V+P++ M +P
Sbjct: 111 Y----AITPPAEVKKAPQKIGLIATHGTLNAGWYQQRFSAQLGAETVVPNEQEMTTLFVP 166
Query: 258 ALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLP-PDDPLLKKCIDPMDA 316
A+ R +++ LL L+ R ++LA ++ L IDP A
Sbjct: 167 GCYAVKRGELQHGGRLLEQLAARLVDRGAERLVLACTEVPLALEVVSSRWWDISIDPTRA 226
Query: 317 LARSTIK 323
LA++ ++
Sbjct: 227 LAQACVR 233
>gi|423614408|ref|ZP_17590266.1| aspartate racemase [Bacillus cereus VD107]
gi|401238529|gb|EJR44969.1| aspartate racemase [Bacillus cereus VD107]
Length = 234
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 111/249 (44%), Gaps = 25/249 (10%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
VGI+GG +T++L+ K++ + P + D + +++ + S G
Sbjct: 5 VGIIGGMGPLATVDLMNKIIFYT------PAMKDQDHI---HVIADNYSQIPDRTTAILG 55
Query: 143 VQLDDS-LIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
+D + I+++ +R L AGA +V+ C+ +H + V K SVP LH+ AK
Sbjct: 56 KGIDPTPYIIQSAQR----LHNAGADFLVIACNTAHFFFGSVEKSVSVPILHMPAETAKF 111
Query: 202 LKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDA 261
L+E N K ++G+LA + + YQ+ Q+ EV+ PD M+ ++ + A
Sbjct: 112 LQENNFK--------KVGLLATDGTINTNLYQQSCQNYDIEVIEPD-VEMQKEVMKGIYA 162
Query: 262 LNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARST 321
+ D+E L L R +I ++ +L + IDP + LA+
Sbjct: 163 IKSGDLETGLLCLSTVANKLTKRGAEAIIAGCTEVPLVLKSSKDIC--VIDPTEILAKMV 220
Query: 322 IKWVKSAEK 330
IK +K
Sbjct: 221 IKTANGTDK 229
>gi|169825878|ref|YP_001696036.1| aspartate racemase [Lysinibacillus sphaericus C3-41]
gi|168990366|gb|ACA37906.1| Aspartate racemase [Lysinibacillus sphaericus C3-41]
Length = 233
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 88/182 (48%), Gaps = 19/182 (10%)
Query: 79 QANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
+ T+GI+GG +T+ + +V+ + + D L +++ + DR++F N
Sbjct: 2 KKQTLGIIGGVGPLATMFIGEMIVRRTKAQKDQEHL---HTIIDNDTNIPDRTAFILDNT 58
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
K V +I+E+ ++ L GA I +PC+ +H ++DE+ G +P LH+
Sbjct: 59 KENPV----PVIMEDAKK----LASVGADMIAIPCNTAHTFYDEIQAGSPIPVLHM---- 106
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPA 258
++E + E G+ R+G+LA LT+ YQE L+ G V+PD H +
Sbjct: 107 ---IRETAKRASELGAE-RVGILATTGTLTSRMYQEALEEYGITPVVPDNEMRAHVMTII 162
Query: 259 LD 260
D
Sbjct: 163 YD 164
>gi|417338520|ref|ZP_12120322.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
gi|353561147|gb|EHC28168.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
Length = 175
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 11/169 (6%)
Query: 160 FLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIG 219
LE AGA CIV+PC+ +H W D++ + + + ++ S +G
Sbjct: 1 MLEDAGAECIVIPCNTAHYWFDDLQNVAKARMISILDATLGDIPP---------SARHVG 51
Query: 220 VLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQ 279
+LA NA L G YQ+K G ++ P++A + ++ A+ L R D A+ LL +
Sbjct: 52 LLATNATLATGLYQKKALARGLTLIQPEEAG-QALVMQAIYTLKRGDKTAAQALLLPQID 110
Query: 280 VLLVRAVNTVILASDDMQDLLPPDDPLLK-KCIDPMDALARSTIKWVKS 327
L+ R +I+ ++ ++ + + ID +L R+ I+W +S
Sbjct: 111 SLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLVRAAIRWYES 159
>gi|341581411|ref|YP_004761903.1| aspartate racemase [Thermococcus sp. 4557]
gi|340809069|gb|AEK72226.1| aspartate racemase [Thermococcus sp. 4557]
Length = 231
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 117/255 (45%), Gaps = 32/255 (12%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLS--GEENDFP-FLLCSDPLLNKELLSHDRSSFSSLN 137
+GI+GG +T +L ++V+ + + D P ++ +DP + DR++F N
Sbjct: 3 RVIGILGGMGPLATADLFRRIVEKTPAKRDQDHPRIIIYNDPKIP------DRTAFILGN 56
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
GG + +VE R+ LE GA I+MPC+ +H + + + + +P + + E
Sbjct: 57 --GGDPR---PALVEGARK----LESWGADFIIMPCNTAHFFAETIQRAVKIPLVSMIEA 107
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIP 257
A+E++ ++ R+G+LA + + Y L G + +P K E +
Sbjct: 108 TAEEIENLGLR--------RVGLLATDGTIKGLVYHRALLGRGVGIAVPGKNDQEKVMRA 159
Query: 258 ALDALNRKDVEGARNLLRIALQVL--LVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMD 315
+ ++E R L L+V+ L R V+ +I ++ L P+D L IDP+D
Sbjct: 160 IYRGVKAGNLELGRRLF---LEVVRRLERRVDGIIAGCTEVSVALKPED-LSVPLIDPLD 215
Query: 316 ALARSTIKWVKSAEK 330
+A ++ E+
Sbjct: 216 VIAEKAVRLALGLEE 230
>gi|390570895|ref|ZP_10251151.1| aspartate racemase [Burkholderia terrae BS001]
gi|420250776|ref|ZP_14753980.1| aspartate racemase [Burkholderia sp. BT03]
gi|389937051|gb|EIM98923.1| aspartate racemase [Burkholderia terrae BS001]
gi|398059842|gb|EJL51684.1| aspartate racemase [Burkholderia sp. BT03]
Length = 233
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 117/258 (45%), Gaps = 42/258 (16%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+GI+GG +T++ + K+V+L+ D P L+ + P + DRSS
Sbjct: 4 IGILGGMGPLATVDFMDKVVRLTEASRDQEHLPLLVANLPHIE------DRSSAI---LD 54
Query: 140 GGGVQLDDSLI-VENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE-C 197
G L L ++ L R V L I +PC+ +H W+ ++ + P L+++E C
Sbjct: 55 DGADPLPALLAGIDMLNRNSVGL-------IAIPCNSAHHWYAQIRAHSAAPVLNIAEIC 107
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIP 257
VA A R+ VLA L +GFYQ L E V PD+ TM+ +
Sbjct: 108 VAAVPSTAR----------RVAVLATGGALVSGFYQRALAERDIEPVTPDE-TMQPLVAD 156
Query: 258 ALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM----QDLLPPDDPLLKKCIDP 313
+D + D++ A L AL +L V ++A ++ Q + P L+ ++
Sbjct: 157 CIDEVKSGDLDAAATHLETALTMLAEEGVTMALMACTEIPLAAQRIAAPPLALIDSSLE- 215
Query: 314 MDALARSTIKWVKSAEKG 331
LAR+T+K+ + E+G
Sbjct: 216 ---LARATVKY--ACERG 228
>gi|375308738|ref|ZP_09774021.1| aspartate racemase [Paenibacillus sp. Aloe-11]
gi|375079365|gb|EHS57590.1| aspartate racemase [Paenibacillus sp. Aloe-11]
Length = 230
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 117/244 (47%), Gaps = 29/244 (11%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNC 138
TVGI+GG +T++L+ K+++L+ +ND ++ + P + DR+ S++
Sbjct: 4 TVGIMGGMGPLATVDLMNKIIRLTPAQNDQDHIHMIVDNYPQIP------DRT--SAIMG 55
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
KG D L KR LE AGA IV+ C+ +H + + + P +++ +
Sbjct: 56 KG-----SDPLPFMKQSAKR--LEDAGADLIVIACNTAHYYLQNIQETVRTPIVNMPKET 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPA 258
A + EA ++ R+ +LA + L YQ L+ +G V+ PD+ T + ++
Sbjct: 109 ASFIGEAGIR--------RVSLLATDGTLKTLLYQNALREKGITVLEPDEIT-QAIVMEG 159
Query: 259 LDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALA 318
+ ++ +E + LL A Q ++ + V+ A ++ +L D + K IDP LA
Sbjct: 160 IYSVKAGHIEKGKRLLVNAFQTMIAKGTEAVVAACTEIPIVLNEVDGI--KVIDPTYILA 217
Query: 319 RSTI 322
+ +
Sbjct: 218 KKVV 221
>gi|242238706|ref|YP_002986887.1| aspartate racemase [Dickeya dadantii Ech703]
gi|242130763|gb|ACS85065.1| aspartate racemase [Dickeya dadantii Ech703]
Length = 236
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 108/252 (42%), Gaps = 34/252 (13%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLL---NKELLSHDRSSFSSL 136
+GI+GG +T++ + KL+ + D P + S P + + +L S S +
Sbjct: 5 IGILGGMGPGATVDAMQKLINNTPAHTDQEHIPMIAVSIPDIPDRTRCILQQGTSPLSKM 64
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
++ LR LE AGA CI+MPC+ +H W D++ + + + +
Sbjct: 65 --------------LQYLR----ILENAGASCIIMPCNTAHYWFDDLKRHTRTEMISIID 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
+ + E +++ +G+LA A + A YQ L + LP +A + ++
Sbjct: 107 ATCQWIDEQSLR--------HVGLLATTATVRADIYQHALSRQQVRCTLPSQAEQD-AVM 157
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKC-IDPMD 315
++ A + AR LL L + V +IL ++ +L P+ +D +
Sbjct: 158 DSIYAYKAGNFALARQLLLPVQTELQRQGVEKIILGCTELPLILAPEILAAPAAYLDATE 217
Query: 316 ALARSTIKWVKS 327
AL R T+ W +
Sbjct: 218 ALVRKTVAWYYT 229
>gi|240103413|ref|YP_002959722.1| aspartate racemase [Thermococcus gammatolerans EJ3]
gi|239910967|gb|ACS33858.1| Aspartate racemase (racD) [Thermococcus gammatolerans EJ3]
Length = 226
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 23/223 (10%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEE-NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGG 141
+G++GG + +ST ++LS E+ F F EL+ + + LN GG
Sbjct: 4 IGLIGGTTPESTCYYYRNYIRLSREKFGSFTF---------PELIIYSINFNEFLNAPGG 54
Query: 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
LI N + LE+AGA I + + HI +V K SVP + + + + +E
Sbjct: 55 WEGRKKILI--NAAKA---LERAGAEIIALTANTPHIVFPDVQKAVSVPMVSIIDALIEE 109
Query: 202 LKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDA 261
+K ++ ++ +L +TAGFY++ L GFE V+P + +E +
Sbjct: 110 MKRRGVR--------KVLLLGTKTTMTAGFYKDALNRAGFEAVVPGREEIEEVNRIIFEE 161
Query: 262 LNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
L ++ + LL + + R + VIL ++ + PDD
Sbjct: 162 LAFENFKNKPYLLSLVEKYRKERGIEGVILGCTELPLAIRPDD 204
>gi|18977352|ref|NP_578709.1| aspartate racemase [Pyrococcus furiosus DSM 3638]
gi|397651486|ref|YP_006492067.1| aspartate racemase [Pyrococcus furiosus COM1]
gi|18893031|gb|AAL81104.1| putative aspartate racemase [Pyrococcus furiosus DSM 3638]
gi|393189077|gb|AFN03775.1| aspartate racemase [Pyrococcus furiosus COM1]
Length = 228
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 113/246 (45%), Gaps = 27/246 (10%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLS--GEENDFP-FLLCSDPLLNKELLSHDRSSFSSLN 137
+GI+GG +T+ L ++V+ + + D P ++ ++P + DR+++
Sbjct: 2 KVIGILGGMGPLATVELFKRIVEKTPAKRDQDHPKIIIYNNPQIP------DRTAY---- 51
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
G G LI + LEK GA IVMPC+ +H + D++ + +P + + E
Sbjct: 52 ILGRGEDPRPQLIWTAKK-----LEKCGADFIVMPCNTAHAFIDDIRREVGIPVISMIEE 106
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIP 257
AK + +K + G+LA + +G Y ++L+ G E++ P + E +
Sbjct: 107 TAKRIASLGIK--------KAGLLATTGTIVSGVYHKELEKYGLEILTPTEEEQELVMKG 158
Query: 258 ALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDAL 317
+ + +++ RNLL ++L R +I ++ ++ D L IDPM+ +
Sbjct: 159 IYEGVKAGNLDLGRNLLLQIARILEERGAEAIIAGCTEVSVVIKESD-LRVMLIDPMNVI 217
Query: 318 ARSTIK 323
A +K
Sbjct: 218 AEVAVK 223
>gi|445127964|ref|ZP_21379956.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|444855616|gb|ELX80661.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
Length = 234
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 11/175 (6%)
Query: 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAG 213
L R LE AGA CIV+PC+ +H W D++ + + + ++
Sbjct: 54 LERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKARMISILDATLGDIPP--------- 104
Query: 214 SPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNL 273
S +G+LA NA L G YQ+K G ++ P++A + ++ A+ L R D A+ L
Sbjct: 105 SARHVGLLATNATLATGLYQKKALARGLTLIQPEEAG-QALVMQAIYTLKRGDKTVAQAL 163
Query: 274 LRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-KCIDPMDALARSTIKWVKS 327
L + L+ R +I+ ++ ++ + + ID +L R+ I+W +S
Sbjct: 164 LLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLVRAAIRWYES 218
>gi|378958045|ref|YP_005215532.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|357208656|gb|AET56702.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
Length = 234
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 11/175 (6%)
Query: 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAG 213
L R LE AGA CIV+PC+ +H W D++ + + + ++
Sbjct: 54 LERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKARMISILDATLGDIPP--------- 104
Query: 214 SPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNL 273
S +G+LA NA L G YQ+K G ++ P++A + ++ A+ L R D A+ L
Sbjct: 105 SARHVGLLATNATLATGLYQKKALARGLTLIQPEEAG-QALVMQAIYTLKRGDKTVAQAL 163
Query: 274 LRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-KCIDPMDALARSTIKWVKS 327
L + L+ R +I+ ++ ++ + + ID +L R+ I+W +S
Sbjct: 164 LLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLVRAAIRWYES 218
>gi|343496243|ref|ZP_08734346.1| aspartate racemase [Vibrio nigripulchritudo ATCC 27043]
gi|342821490|gb|EGU56264.1| aspartate racemase [Vibrio nigripulchritudo ATCC 27043]
Length = 231
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 110/252 (43%), Gaps = 34/252 (13%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLL---NKELLSHDRSSFSSL 136
+G++GG +T + K++ + + D P L+ + P + L+ F++L
Sbjct: 5 IGVLGGMGPLATAEFMKKVIMKTPAQFDQEHIPMLIRNVPQVPDRTNYLMGFGSDPFAAL 64
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
N G L KAGA CIV+PC+ +H W++ + +G V + + E
Sbjct: 65 NHGFGE------------------LLKAGATCIVIPCNTAHHWYERLTRGKRVHTISIIE 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
V ++ + +G+LA +A + YQ L+ G + ++P + + +++
Sbjct: 107 SVVEQAVSREYQ--------CVGILATDATIQTNLYQSALEQHGIKAIVPGQ-LQQASVM 157
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPP-DDPLLKKCIDPMD 315
+ A+ D+ A N++ ++ + VI ++ L + +KC+D +
Sbjct: 158 EGIKAVKAGDLNIATNIIEPVFDDMVKHGADAVIFGCTEIPVALEKIEQKAPEKCLDSLG 217
Query: 316 ALARSTIKWVKS 327
LA+ + W KS
Sbjct: 218 ILAQKCVLWAKS 229
>gi|188585267|ref|YP_001916812.1| aspartate racemase [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349954|gb|ACB84224.1| aspartate racemase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 244
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 89/179 (49%), Gaps = 7/179 (3%)
Query: 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAG 213
LR LE GA +VMPC+ +H ++ ++ ++PF+++ EC A+ + + + G
Sbjct: 65 LRDMAKRLENMGADFLVMPCNTAHYFYKDIQDVVNIPFVNMLECTARYINKLIGNDSKQG 124
Query: 214 SPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDV-EGARN 272
++G+LA + L YQ +L GFEV+ P+ + ++ A+ A+ D+ R
Sbjct: 125 ---KVGLLATSGTLQTEIYQNQLSQFGFEVITPEP--YQQLVMEAIYAVKAGDIGTSTRE 179
Query: 273 LLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTI-KWVKSAEK 330
LL ++ L +I+ ++ + + + IDP + LA T+ + +K+ +K
Sbjct: 180 LLEKPIKQLENNGAKAIIMGCTEIPVIATTEQTTQAELIDPTEVLADETVSRALKTGDK 238
>gi|89095413|ref|ZP_01168326.1| aspartate racemase [Neptuniibacter caesariensis]
gi|89080320|gb|EAR59579.1| aspartate racemase [Oceanospirillum sp. MED92]
Length = 258
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 116/257 (45%), Gaps = 36/257 (14%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLL--NKELLSHDRSSFSS 135
T+G++GG +TL+ K++Q + + D P L+ S P + + L +D +S +
Sbjct: 25 KTLGVLGGMGPLATLDFAHKIIQNTPAQRDQEHIPMLIRSIPQIPDRTDCLMNDSASPLT 84
Query: 136 LNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195
+G L++ L AG I +PC+ +H W ++ VP H++
Sbjct: 85 AMLQG----LEELL-------------SAGVEAIAIPCNTAHFWQPDLQAKSPVPVFHIA 127
Query: 196 ECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTL 255
++ L++ + ++ ++A + L AGFY E L +G ++ LP A ++ +
Sbjct: 128 HACSESLQQLQIS--------KVTLMATDGTLKAGFYPEILSRQGIQLELP-PADIQQKI 178
Query: 256 IPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQ---DLLPPDDPLLKKCID 312
+ + ++ ++ LL A Q LL + VIL ++ D L + L + +D
Sbjct: 179 MRGIYSVKSGNIALGGKLLNNAFQSLLNQGFERVILGCTEIPLALDHLGAEH--LDRSLD 236
Query: 313 PMDALARSTIKWVKSAE 329
ALA + W SA+
Sbjct: 237 ATSALASFCVDWSISAQ 253
>gi|338814119|ref|ZP_08626163.1| aspartate racemase [Acetonema longum DSM 6540]
gi|337273888|gb|EGO62481.1| aspartate racemase [Acetonema longum DSM 6540]
Length = 237
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 111/255 (43%), Gaps = 45/255 (17%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND----FPFLLCSD--PLLNKELLSHDRSSFSSL 136
+GI+GG +T +L K++ ++ ++D F+ C+ P K +L
Sbjct: 5 IGILGGMGAAATCDLFNKIITMTDAKSDQDHIHIFIDCNTNIPDRTKAILGKGEDP---- 60
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
V + R + L+ GA +VMPC+ +H ++D + VP L++ +
Sbjct: 61 --------------VPEIVRSGIRLQSMGANVLVMPCNTAHYFYDRITPFFDVPLLNMLQ 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEH 253
A+ +++ +K RIG+LA + L +G Y L G E V+P D+A++
Sbjct: 107 LTAEAIQKRGIK--------RIGLLATDGTLQSGVYHAVLAQAGIEAVIPSLSDQASVMD 158
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQ---DLLPPDDPLLKKC 310
+ + NR +++ R + L R +IL ++ ++ D P
Sbjct: 159 VIYNGIKGANR-NIDLGR--FYDTIDGLFARGAEILILGCTELPIAFEIYRIDRP----A 211
Query: 311 IDPMDALARSTIKWV 325
IDP LA + I++V
Sbjct: 212 IDPTTVLAAAAIQFV 226
>gi|253687797|ref|YP_003016987.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum
PC1]
gi|251754375|gb|ACT12451.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum
PC1]
Length = 238
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 115/250 (46%), Gaps = 24/250 (9%)
Query: 83 VGIVGGASVDSTLNLLGKLVQ---LSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
VG++GG +T++LL K+++ S +++ P + + P + DR
Sbjct: 6 VGVLGGMGPLATVDLLHKIIEETPASRDQDHVPVVAWNVPQIP------DRQ-----QAL 54
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G + +++ +R+ L IV+PC+ +H W D + + P +H+++
Sbjct: 55 AGTGESPLPMLLHAVRQ----LNHLSVSHIVVPCNTAHHWFDALAEESYAPLIHIADAT- 109
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEHTLIPA 258
L + +P +IG++A + L G+YQ++ + G E V+PD+ M +P
Sbjct: 110 --LHAITLPADAKKAPQKIGLIATHGTLNVGWYQQRFAAQLGAETVVPDEQEMTTLFVPG 167
Query: 259 LDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKC-IDPMDAL 317
A+ R +++ LL L+ R ++LA ++ L + IDP AL
Sbjct: 168 CYAVKRGELQHGGRLLDQLAARLVARGAERLVLACTEVPPALETVSSRWRDISIDPTRAL 227
Query: 318 ARSTIK-WVK 326
A++ ++ W++
Sbjct: 228 AQACVRIWLQ 237
>gi|337284158|ref|YP_004623632.1| aspartate racemase [Pyrococcus yayanosii CH1]
gi|334900092|gb|AEH24360.1| aspartate racemase [Pyrococcus yayanosii CH1]
Length = 226
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 115/246 (46%), Gaps = 28/246 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQL--SGEENDFP-FLLCSDPLLNKELLSHDRSSFSSLN 137
T+GI+GG +T L ++V+ + + D P ++ S+P + DR++F
Sbjct: 2 KTIGILGGMGPLATAELFRRIVEKVPARRDQDHPKVIVISNPQIP------DRTAF---- 51
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
G G +L VE +R LE GA I+MPC+ +H + +++ + +P + + E
Sbjct: 52 ILGYGEDPRPAL-VETAKR----LEACGADFIIMPCNTAHAFIEDIQRAVKIPVVSMVEE 106
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIP 257
A+++ E +K R G+LA + + Y+ L EVV+PD+ E +
Sbjct: 107 TARKIAEMGVK--------RAGLLATTGTVVSRVYERALARWAVEVVVPDEEGQEKVMRA 158
Query: 258 ALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDAL 317
+ + ++E R L+ + L R V+ VI ++ L+ D L +DPMD +
Sbjct: 159 IYEGVKAGNIELGRRLILEVARSLEGR-VDCVIAGCTEVS-LVLHDGDLSVPIVDPMDVI 216
Query: 318 ARSTIK 323
A ++
Sbjct: 217 AERAVR 222
>gi|225574214|ref|ZP_03782824.1| hypothetical protein RUMHYD_02278 [Blautia hydrogenotrophica DSM
10507]
gi|225038582|gb|EEG48828.1| aspartate racemase [Blautia hydrogenotrophica DSM 10507]
Length = 237
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 111/258 (43%), Gaps = 43/258 (16%)
Query: 78 NQANTVGIVGGASVDSTLNLLGKLVQLS----GEENDFPFLLCSD--PLLNKELLSHDRS 131
++ TVGI+GG +T +L+ K+++L+ +EN + C+ P +L H S
Sbjct: 4 SEKKTVGIIGGMGPLATCDLMEKIIRLTKARTDQENLHLVVDCNTDIPDRTAAILEHGAS 63
Query: 132 SFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPF 191
V L R + L+ GA +VM C+ +H ++D + +P
Sbjct: 64 P------------------VPQLVRSGIKLQGMGADVLVMSCNTAHYFYDSIVPYFDIPL 105
Query: 192 LHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATM 251
LH+ AK LK ++ + G+LA + L G Y+E ++ EG E++ PD
Sbjct: 106 LHMIRETAKHLKAQEIQ--------KAGLLATSGTLNCGVYREAMKREGIELLTPDGEDQ 157
Query: 252 EHTLIPALDAL--NRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPP---DDPL 306
E + + R D++ R A++ LL R +IL ++ + D P+
Sbjct: 158 EAVMGMIYQGVKAGRTDLDTRR--FERAMEKLLERGAEVLILGCTELPVAVSRYGWDYPV 215
Query: 307 LKKCIDPMDALARSTIKW 324
DP LA S + +
Sbjct: 216 ----ADPTQILAESVVHY 229
>gi|390452632|ref|ZP_10238160.1| aspartate racemase [Paenibacillus peoriae KCTC 3763]
Length = 230
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 115/242 (47%), Gaps = 25/242 (10%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFL-LCSDPLLNKELLSHDRSSFSSLNCKG 140
TVGI+GG +T++L+ K+++L+ +ND + + D ++ + +L G
Sbjct: 4 TVGIMGGMGPLATVDLMNKIIRLTPAQNDQDHIHMIVD--------NYPQIPDRTLAIMG 55
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
G +D L KR LE AGA IV+ C+ +H + + + P +++ + A
Sbjct: 56 KG---NDPLPFMKQSAKR--LEDAGADLIVIACNTAHYYLQNIQETVRTPIVNMPKETAS 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALD 260
+ EA ++ R+ +LA + L YQ L+ +G V+ PD+ T + ++ +
Sbjct: 111 FIGEAGIR--------RVSLLATDGTLKTLLYQNALREKGITVLEPDEIT-QAIVMEGIY 161
Query: 261 ALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARS 320
++ +E + LL A Q ++ + V+ A ++ +L D + K IDP LA+
Sbjct: 162 SVKAGHIEKGKRLLVNACQTMIAKGTKAVVAACTEIPIVLSEVDGI--KVIDPTYILAKK 219
Query: 321 TI 322
+
Sbjct: 220 VV 221
>gi|452128656|ref|ZP_21941233.1| aspartate racemase [Bordetella holmesii H558]
gi|451925703|gb|EMD75841.1| aspartate racemase [Bordetella holmesii H558]
Length = 256
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 103/222 (46%), Gaps = 24/222 (10%)
Query: 83 VGIVGGASVDSTLNLLGKLVQL---SGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+GI+GG + +L L S ++ P LL +DP + DRS+
Sbjct: 18 LGILGGMGPLAGAAFAMRLAALTPASIDQQHIPALLLNDPRIP------DRSTARLY--- 68
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
GG ++ LR R L AGA+ I +PC+ +H+W++++ + LH+ E VA
Sbjct: 69 -GGADPWPAM----LRGIRT-LNNAGAKLIAVPCNTAHLWYEQMAQASECEVLHIIEAVA 122
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
++LK + + R+G++ A L G YQ+ L+ G+ ++P + ++ + ++
Sbjct: 123 QDLKRQGI------TRGRVGLMGTAATLGLGLYQQTLEKHGYTCIVPTEEEIDTLCMASI 176
Query: 260 DALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLP 301
A+ VE + ++ L R + V+L ++ +P
Sbjct: 177 RAVKGNQVEESFAPAAECIERLRTRGADAVVLGCTELPLAVP 218
>gi|261821090|ref|YP_003259196.1| aspartate racemase [Pectobacterium wasabiae WPP163]
gi|261605103|gb|ACX87589.1| aspartate racemase [Pectobacterium wasabiae WPP163]
Length = 238
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 116/249 (46%), Gaps = 29/249 (11%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+G++GG +T++LL K+V+ + D P ++ + P + + + S L
Sbjct: 6 IGVLGGMGPLATVDLLYKIVEETPARRDQDHVPVVVWNVPQIPDRQQALAGTGESPLPTL 65
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
+Q + L V + IV+PC+ +H W D + + P +H+++
Sbjct: 66 LNAIQQLNRLSVSH---------------IVVPCNTAHHWFDALAEASHAPLVHIADATL 110
Query: 200 KELKEANMKPL--EAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEHTLI 256
+ PL E P +IG++A + L AG+YQ++ + E V+P++ M +
Sbjct: 111 HAI-----TPLVEEKEVPQKIGLIATHGTLNAGWYQQRFTTQLSAETVVPNEQEMTTLFV 165
Query: 257 PALDALNRKDVE-GARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKC-IDPM 314
P A+ R +++ G R L ++A Q L+ R ++LA ++ L + IDP
Sbjct: 166 PGCYAVKRCELQHGGRLLEQLAAQ-LVERGAERLVLACTEVPPALEAVSSRWRDISIDPT 224
Query: 315 DALARSTIK 323
ALA++ ++
Sbjct: 225 RALAQACVR 233
>gi|28210540|ref|NP_781484.1| aspartate racemase [Clostridium tetani E88]
gi|28202977|gb|AAO35421.1| aspartate racemase [Clostridium tetani E88]
Length = 231
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 118/253 (46%), Gaps = 30/253 (11%)
Query: 80 ANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+ VGI+GG +T++L K+V + +D L +++ DR+S+
Sbjct: 2 SKIVGIIGGMGPKATVDLYNKIVDYTDASSDQDHLHV---VIDGNAKIPDRTSY----IL 54
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G G D L+ R L+ AGA ++MPC+ +H ++DE+ + ++PF+++ E V
Sbjct: 55 GNGKSPLDELVKTGER-----LKNAGADFLIMPCNTAHYFYDELYEKLNMPFINMIEEVG 109
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
K + + K +++G+LA Y+ + G ++++P K +
Sbjct: 110 KYIVTKHGK-------IKVGLLATLGTYQGKIYERYCKELGLDIIIPSKEVRQK----VS 158
Query: 260 DALNRKDVEGARNLLR-IALQVLL---VRAVNTVILASDDMQDLLPPDDPLLK--KCIDP 313
DA+ G RN + A+ +L + VN VIL ++ + P + LK + I
Sbjct: 159 DAVYIVK-SGQRNFTKEFAMDMLKEFNEKDVNAVILGCTELPLIFQPLENDLKDFEFISS 217
Query: 314 MDALARSTIKWVK 326
D LA+ TIK VK
Sbjct: 218 TDILAKETIKRVK 230
>gi|452125246|ref|ZP_21937830.1| aspartate racemase [Bordetella holmesii F627]
gi|451924476|gb|EMD74617.1| aspartate racemase [Bordetella holmesii F627]
Length = 233
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 98 LGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRK 157
L L S ++ P LL +DP + DRS+ GG ++ LR
Sbjct: 13 LAALTPASIDQQHIPALLLNDPRIP------DRSTARLY----GGADPWPAM----LRGI 58
Query: 158 RVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLR 217
R L AGA+ I +PC+ +H+W++++ + LH+ E VA++LK + + R
Sbjct: 59 RT-LNNAGAKLIAVPCNTAHLWYEQMAQASECEVLHIIEAVAQDLKRQGI------TRGR 111
Query: 218 IGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIA 277
+G++ A L G YQ+ L+ G+ ++P + ++ + ++ A+ VE +
Sbjct: 112 VGLMGTAATLGLGLYQQTLEKHGYTCIVPTEEEIDTLCMASIRAVKGNQVEESFAPAAEC 171
Query: 278 LQVLLVRAVNTVILASDDMQDLLP 301
++ L R + V+L ++ +P
Sbjct: 172 IERLRTRGADAVVLGCTELPLAVP 195
>gi|389870904|ref|YP_006378323.1| aspartate racemase family protein 2 [Advenella kashmirensis WT001]
gi|388536153|gb|AFK61341.1| aspartate racemase family protein 2 [Advenella kashmirensis WT001]
Length = 270
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 108/245 (44%), Gaps = 26/245 (10%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLS---GEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+G++GG + +LVQL+ ++ P LL +DP + DRS+
Sbjct: 23 LGVLGGMGPLAGATFAARLVQLTPVTADQAHIPVLLRNDPRIP------DRSA---AQLA 73
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
GG L +R+ L++ GA+CI +PC+ +H+W +++ VP LH+ E V
Sbjct: 74 GGPSPL------PAMRQGMQDLQRWGAQCIAIPCNTAHLWFEQLRDSVQVPVLHIVESVI 127
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
++L+ + P +GV+ A + YQ+ L+ G+E + ++ + A+
Sbjct: 128 QDLQRNGI----CDGP--VGVMGTPATMQLELYQKALRAAGYEPFTGNDNSIRDWSVQAI 181
Query: 260 DALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPD--DPLLKKCIDPMDAL 317
A+ E A A+ L VIL ++ +PP D D +DAL
Sbjct: 182 AAVKSNQNELAFAPAAAAVNRLAQMGARAVILGCTELPLAIPPSRRDAFDVVISDSIDAL 241
Query: 318 ARSTI 322
A + +
Sbjct: 242 AHAVL 246
>gi|422008326|ref|ZP_16355310.1| aspartate racemase [Providencia rettgeri Dmel1]
gi|414094799|gb|EKT56462.1| aspartate racemase [Providencia rettgeri Dmel1]
Length = 242
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 160 FLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIG 219
LE AG CI+MPC+ +H W++++ K + F+ + ++ + N+K ++
Sbjct: 70 ILENAGVSCIIMPCNTAHFWYEDLIKETEIHFISIINAACNKILKDNVK--------KVA 121
Query: 220 VLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQ 279
+LA A + YQ KL G E + PD+ ++ ++ ++ + D A+ L+ +
Sbjct: 122 LLATTATIQTKLYQNKLSLHGVECIEPDEMN-QYKIMQSIISYKSGDFRKAKKLIYPYIN 180
Query: 280 VLLVRAVNTVILASDDMQDLL---PPDDPLLKKCIDPMDALARSTIKW 324
L V+ ++ ++ +L D P ++ ID +AL I W
Sbjct: 181 QLKSIGVDKFVMGCTEIPLILEDVSKDSP--EQFIDATEALINEAIDW 226
>gi|251790314|ref|YP_003005035.1| aspartate racemase [Dickeya zeae Ech1591]
gi|247538935|gb|ACT07556.1| aspartate racemase [Dickeya zeae Ech1591]
Length = 252
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 108/249 (43%), Gaps = 34/249 (13%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLL---NKELLSHDRSSFSSL 136
+GI+GG +T++ + KL++ + D P + S P + + +L+H S +
Sbjct: 19 IGILGGMGPGATVDAMQKLIRQTPARKDQEHIPVIAVSIPDIPDRTQCILNHSPSPLKKM 78
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+E +R LE AGA CI++PC+ +H W +++ + V + + E
Sbjct: 79 --------------IEYMR----ILENAGATCIIIPCNTAHYWFEDLKQHTQVDMISIIE 120
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
+++ E ++ + +LA A + + YQ L + LP + ++
Sbjct: 121 AACQQVAEQRVR--------HVAILATTATVRSDIYQHALADQQVRCTLPTNE-QQDAVM 171
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKC-IDPMD 315
++ A DV +R LL + L + V +IL ++ +L + +D D
Sbjct: 172 NSIYAYKAGDVAQSRALLLPVVASLRQQGVEKMILGCTELPLILETEVSTTPDIYLDATD 231
Query: 316 ALARSTIKW 324
AL + TI W
Sbjct: 232 ALIKKTIAW 240
>gi|158428132|pdb|2DX7|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Ot3 Aspartate
Racemase Complex With Citric Acid
gi|158428133|pdb|2DX7|B Chain B, Crystal Structure Of Pyrococcus Horikoshii Ot3 Aspartate
Racemase Complex With Citric Acid
Length = 228
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 111/246 (45%), Gaps = 27/246 (10%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDF---PFLLCSDPLLNKELLSHDRSSFSSLN 137
T+GI+GG +T L ++V + + D ++ ++P + DR+++
Sbjct: 2 KTIGILGGMGPLATAELFRRIVIKTPAKRDQEHPKVIIFNNPQIP------DRTAY---- 51
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
G G LI R LE+ GA I+MP + +H + +++ K +P + + E
Sbjct: 52 ILGKGEDPRPQLIWTAKR-----LEECGADFIIMPANTAHAFVEDIRKAIKIPIISMIEE 106
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIP 257
AK++KE K + G+LA + +G Y+++ G E++ P + + +
Sbjct: 107 TAKKVKELGFK--------KAGLLATTGTIVSGVYEKEFSKYGVEIMTPTEDEQKDVMRG 158
Query: 258 ALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDAL 317
+ + +++ R LL ++L R +I ++ +L DD L IDPMD +
Sbjct: 159 IYEGVKAGNLKLGRELLLKTAKILEERGAECIIAGCTEVSVVLKQDD-LKVPLIDPMDVI 217
Query: 318 ARSTIK 323
A +K
Sbjct: 218 AEVAVK 223
>gi|291326871|ref|ZP_06126146.2| putative aspartate racemase [Providencia rettgeri DSM 1131]
gi|291312313|gb|EFE52766.1| putative aspartate racemase [Providencia rettgeri DSM 1131]
Length = 155
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 32/159 (20%)
Query: 83 VGIVGGASVDSTLNLLGKLVQ---LSGEENDFPFLLCSDPLL---NKELLSHDRSSFSSL 136
+G++GG +T++L K V ++ ++ P ++ S P + LL+H S
Sbjct: 23 IGVLGGMGPAATVDLFNKFVNYTVVNRDQEHIPLIISSIPDIPDRTDALLNHGESPLP-- 80
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
L+ + LR+ LE AGA CIV+PC+ +H W E+ + C V L + E
Sbjct: 81 ------------LMTDYLRK----LENAGAECIVIPCNTAHFWFSELKEVCHVDMLSIVE 124
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEK 235
KE+ K IG+LA NA + G YQ+K
Sbjct: 125 TTMKEVLVTKKK--------NIGLLATNATMYMGLYQKK 155
>gi|374324115|ref|YP_005077244.1| aspartate racemase [Paenibacillus terrae HPL-003]
gi|357203124|gb|AET61021.1| aspartate racemase [Paenibacillus terrae HPL-003]
Length = 230
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 114/242 (47%), Gaps = 25/242 (10%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFL-LCSDPLLNKELLSHDRSSFSSLNCKG 140
TVGI+GG +T++L+ K+++L+ +ND + + D ++ + +L G
Sbjct: 4 TVGIMGGMGPLATVDLMNKIIRLTPAQNDQDHIHMIVD--------NYPQIPDRTLAIMG 55
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
G +D L KR LE AG IV+ C+ +H + + + P +++ + A
Sbjct: 56 KG---NDPLPFMKQSAKR--LEDAGTDLIVIACNTAHYYLQNIQETVRTPIVNMPKETAS 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALD 260
+ EA ++ R+ +LA + L YQ L+ +G V+ PD+ T + ++ +
Sbjct: 111 FIGEAGIR--------RVSLLATDGTLKTLLYQNALREKGITVLEPDEIT-QAIVMEGIY 161
Query: 261 ALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARS 320
++ +E + LL A Q ++ + V+ A ++ +L D + K IDP LA+
Sbjct: 162 SVKAGHIEKGKRLLVNACQTMIAKGTKAVVAACTEIPIVLSEVDGI--KVIDPTYILAKK 219
Query: 321 TI 322
+
Sbjct: 220 VV 221
>gi|407796495|ref|ZP_11143448.1| aspartate racemase [Salimicrobium sp. MJ3]
gi|407019011|gb|EKE31730.1| aspartate racemase [Salimicrobium sp. MJ3]
Length = 235
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 87/178 (48%), Gaps = 10/178 (5%)
Query: 146 DDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV-SECVAKELKE 204
DD + + + LEK + I +PC+ +H +++ + + SVP +H+ E VA +
Sbjct: 57 DDEEFINRIVQDIQLLEKINVQNIAIPCNTTHYFYNIIQEETSVPIIHMPKESVASAV-- 114
Query: 205 ANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNR 264
+N ++ +IG++A + G Y+++ + G E+V P +A E + D + +
Sbjct: 115 SNFDDVK-----KIGIMATTGTIRTGIYRKECEEMGVELVAPSEAGQEDVMSLIYDEI-K 168
Query: 265 KDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTI 322
K + G R+ A Q L+ + +ILA ++ + + L C+D M+ L + I
Sbjct: 169 KGLPGDRSKFDRAYQELIAAGSDVIILACTELS-VFGEKNELYDNCLDAMEVLVKEVI 225
>gi|299770779|ref|YP_003732805.1| aspartate racemase [Acinetobacter oleivorans DR1]
gi|298700867|gb|ADI91432.1| aspartate racemase [Acinetobacter oleivorans DR1]
Length = 241
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 120 LLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRV--------FLEKAGARCIVM 171
LL+ + D+ ++ GG+ D L ++NL + LE++G I +
Sbjct: 28 LLDASPATKDQEHIPTIAWNHGGIP-DRQLALKNLGESPLNAMLHGLKILERSGVSKIAI 86
Query: 172 PCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGF 231
PC+ +H WH ++ + + L++ E +++ +K ++G ++G+LA L+
Sbjct: 87 PCNTAHFWHSDLQQHTPIEILNMVEITVQQI----LKNYQSGD--KVGILATKGALSTQL 140
Query: 232 YQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVIL 291
YQ +L V+ +E +PA+ A+ R + A + + Q L+ + ++IL
Sbjct: 141 YQHELSKHDIPFVINSDEEIEQEFMPAVYAVKRNESAKAGIVFQELSQRLIDQGAGSIIL 200
Query: 292 ASDDMQ-DLLPPDDPLLKKCIDPMDALARSTIKW 324
A ++ L P+L D LA + + W
Sbjct: 201 ACTEIPIGLHAIQSPILDVSFDTTQILADACVHW 234
>gi|319784854|ref|YP_004144330.1| aspartate racemase [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317170742|gb|ADV14280.1| aspartate racemase [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 265
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAG 213
L+ L G C+ MPC+ +H W+D++ +H+ + V E + + LE G
Sbjct: 69 LKAAVATLNALGVACVAMPCNTAHHWYDQLAANSRAEIIHIGDAVVAETR----RSLERG 124
Query: 214 SPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
R+ VLA L +GFYQ+++ GFE+ LP +
Sbjct: 125 ---RVAVLATQGTLVSGFYQDRMSAAGFELCLPSNTEFQ 160
>gi|445443774|ref|ZP_21442720.1| aspartate racemase [Acinetobacter baumannii WC-A-92]
gi|444762437|gb|ELW86801.1| aspartate racemase [Acinetobacter baumannii WC-A-92]
Length = 226
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 97/214 (45%), Gaps = 16/214 (7%)
Query: 120 LLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRV--------FLEKAGARCIVM 171
LL+ + D+ ++ GG+ D L ++NL + LE++G I +
Sbjct: 13 LLDTSPATKDQEHIPTIVWNHGGIP-DRQLALKNLGESPLNAMLHGLKILERSGVSKIAI 71
Query: 172 PCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGF 231
PC+ +H WH ++ + + L++ E +++ +K ++G ++G+LA L+
Sbjct: 72 PCNTAHFWHSDLQQHTHIQILNMVEITVQQI----LKNYQSGD--KVGILATKGALSTQL 125
Query: 232 YQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVIL 291
YQ +L ++ +E +PA+ A+ R + A + + Q L+ + +++IL
Sbjct: 126 YQIELSKHSIPFIINSDEEIEQEFMPAVYAVKRNETAKAGIVFQELSQRLIDKGADSIIL 185
Query: 292 ASDDMQ-DLLPPDDPLLKKCIDPMDALARSTIKW 324
A ++ L P+L D LA + + W
Sbjct: 186 ACTEIPIGLHAIQSPILDVSFDTTQILADACVNW 219
>gi|365922090|ref|ZP_09446327.1| aspartate racemase [Cardiobacterium valvarum F0432]
gi|364574940|gb|EHM52371.1| aspartate racemase [Cardiobacterium valvarum F0432]
Length = 228
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 22/171 (12%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+GI+GG +T++L K+ + D L L++ DR++ C
Sbjct: 2 KTLGIIGGMGPQATIDLYQKITDHTAASRDQDHLHI---LIDSYPQIPDRTAHI---CGN 55
Query: 141 GGVQLDDSL--IVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
G DD L +V + RR LE AGA ++MPC+ +H + + + +PFLH+++C
Sbjct: 56 G----DDPLPYLVRSARR----LEAAGAELLLMPCNAAHHYIRALRERTILPFLHIADCA 107
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
L P GS R+ VLA +G Y++ LQ G++ V PD+A
Sbjct: 108 IAALST-RCPP---GS--RVAVLATRGTRHSGIYRDALQQAGYQAVEPDEA 152
>gi|421694401|ref|ZP_16134026.1| aspartate racemase [Acinetobacter baumannii WC-692]
gi|424060430|ref|ZP_17797921.1| aspartate racemase [Acinetobacter baumannii Ab33333]
gi|404568403|gb|EKA73507.1| aspartate racemase [Acinetobacter baumannii WC-692]
gi|404668382|gb|EKB36291.1| aspartate racemase [Acinetobacter baumannii Ab33333]
Length = 241
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 120 LLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRV--------FLEKAGARCIVM 171
LL+ + D+ ++ GG+ D L ++NL + LE++G I +
Sbjct: 28 LLDTSPATKDQEHIPTIVWNHGGIP-DRQLALKNLGESPLNAMLHGLKILERSGVSKIAI 86
Query: 172 PCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGF 231
PC+ +H WH ++ + + L++ E +++ +K ++G ++G+LA L+
Sbjct: 87 PCNTAHFWHSDLQQHTHIQILNMVEITVQQI----LKNYQSGD--KVGILATKGALSTQL 140
Query: 232 YQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVIL 291
YQ +L ++ +E +PA+ A+ R + A + + Q L+ + ++IL
Sbjct: 141 YQIELSKHSIPFIINSDEEIEQEFMPAVYAVKRNETAKAGIVFQELSQRLIDKGAGSIIL 200
Query: 292 ASDDMQ-DLLPPDDPLLKKCIDPMDALARSTIKW 324
A ++ L P+L D LA + + W
Sbjct: 201 ACTEIPIGLHAIQSPILDVSFDTTQILADACVNW 234
>gi|453069668|ref|ZP_21972923.1| aspartate racemase [Rhodococcus qingshengii BKS 20-40]
gi|452762809|gb|EME21099.1| aspartate racemase [Rhodococcus qingshengii BKS 20-40]
Length = 243
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 116/253 (45%), Gaps = 28/253 (11%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND--FP-FLLCSDPLLNKELLSHDRSSFSSLNCK 139
+GI+GG +T + KLV L+ D P ++ +DP + DR+ + N
Sbjct: 6 IGILGGMGPAATADFYSKLVALTPGSTDQEHPKVVIWADPTVP------DRTLALTENGP 59
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
L +R RV L ++GA + +PC+ +H + + +P +H+ + VA
Sbjct: 60 DPTPWL--------IRGARV-LRESGATTLAIPCNTAHAFLPAISSQLGLPVVHMIDEVA 110
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
+ ++ + P + +G+LA + G YQ+ L +V++P A + ++PA+
Sbjct: 111 RHIR--TLSP----AVTSVGLLATTGTVRTGLYQQWLSEHSIDVLVPGPAIQDELVMPAI 164
Query: 260 DALNRKDV--EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDAL 317
A+ +V E L+R A LLV + V++A L P D + IDP L
Sbjct: 165 RAIKSGNVGDETTDKLVRAA--DLLVESGAQVVVAGCTEIPLGLPADATTCQIIDPATIL 222
Query: 318 ARSTIKWVKSAEK 330
AR+ ++ V A +
Sbjct: 223 ARALLRRVADARR 235
>gi|310778942|ref|YP_003967275.1| aspartate racemase [Ilyobacter polytropus DSM 2926]
gi|309748265|gb|ADO82927.1| aspartate racemase [Ilyobacter polytropus DSM 2926]
Length = 233
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 120/248 (48%), Gaps = 30/248 (12%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGG 141
TVGI+GG +T +L K+V L+ ++D + +LN + DR+++ N +
Sbjct: 3 TVGILGGMGPLATSDLFNKIVTLTDAKDDNDHIHI---ILNNYPIIPDRTNYILGNGENP 59
Query: 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
V+ + + L+ G+ I+MPC+ +H ++ E+ + ++PF+++ E AKE
Sbjct: 60 ---------VKYMLEAALKLQVMGSDVIIMPCNTAHYFYKELTEHLTIPFINMIEETAKE 110
Query: 202 LKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDA 261
+KE + +I + + A Y + ++ G E++ P+K+ ++ + + +
Sbjct: 111 IKEID------PETKKIFLFSTQGTYKAKIYDKVFENYGLEILRPEKS-VQSVVTDIIYS 163
Query: 262 LNRKDVEGARNLLRIALQVLL--VRAVNTVILASDDMQDLLPPDDPLL---KKCIDPMDA 316
+ + D +N+ + L + + N ++ ++ LP +L K CIDP
Sbjct: 164 IKKGDT-ALKNIDKNILTSYIESIEGKNIILGCTE-----LPVAFDILGIKKNCIDPTKI 217
Query: 317 LARSTIKW 324
LA+S I++
Sbjct: 218 LAKSAIRF 225
>gi|354598328|ref|ZP_09016345.1| aspartate racemase [Brenneria sp. EniD312]
gi|353676263|gb|EHD22296.1| aspartate racemase [Brenneria sp. EniD312]
Length = 238
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 109/249 (43%), Gaps = 34/249 (13%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLS---GEENDFPFLLCSDPLL---NKELLSHDRSSFSSL 136
VGI+GG +T++ + KL++ + +++ P + S P + + +L H S
Sbjct: 5 VGILGGMGPGATVDAMQKLIKNTPAYRDQDHIPMIAVSIPDIPDRTQCILDHSASPL--- 61
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
E + + LE AGA CI++PC+ +H W +E+ V + + +
Sbjct: 62 ---------------EKMIQYMKILENAGAECIIIPCNTAHYWFNELKLHSRVEMISIID 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
+ +++ + + +LA A + A YQ L G + +P A + ++
Sbjct: 107 AACQVIRDKKIA--------SVALLATTATIKAQIYQRHLAESGIDCHIPPAAE-QSAVM 157
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLL-KKCIDPMD 315
++ A D + A +LL LL V +IL ++ +L + L + ID +
Sbjct: 158 ESIYAYKSGDAQRAHSLLTPIKDRLLQSGVEKIILGCTELPLILQQEIKLAPENYIDATE 217
Query: 316 ALARSTIKW 324
AL + T++W
Sbjct: 218 ALIKKTVEW 226
>gi|421664801|ref|ZP_16104937.1| aspartate racemase [Acinetobacter baumannii OIFC110]
gi|408711972|gb|EKL57164.1| aspartate racemase [Acinetobacter baumannii OIFC110]
Length = 226
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 120 LLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRV--------FLEKAGARCIVM 171
LL+ + D+ ++ GG+ D L ++NL + LE++G I +
Sbjct: 13 LLDTSPATKDQEHIPTIVWNHGGIP-DRQLALKNLGESPLNAMLHGLKILERSGVSKIAI 71
Query: 172 PCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGF 231
PC+ +H WH ++ + + L++ E +++ +K ++G ++G+LA L+
Sbjct: 72 PCNTAHFWHSDLQQHTHIQILNMVEITVQQI----LKNYQSGD--KVGILATKGALSTQL 125
Query: 232 YQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVIL 291
YQ +L ++ +E +PA+ A+ R + A + + Q L+ + ++IL
Sbjct: 126 YQIELSKHSIPFIINSDEEIEQEFMPAVYAVKRNETAKAGIVFQELSQRLIDKGAGSIIL 185
Query: 292 ASDDMQ-DLLPPDDPLLKKCIDPMDALARSTIKW 324
A ++ L P+L D LA + + W
Sbjct: 186 ACTEIPIGLHAIQSPILDVSFDTTQILADACVNW 219
>gi|410583554|ref|ZP_11320660.1| aspartate racemase [Thermaerobacter subterraneus DSM 13965]
gi|410506374|gb|EKP95883.1| aspartate racemase [Thermaerobacter subterraneus DSM 13965]
Length = 309
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 110/250 (44%), Gaps = 20/250 (8%)
Query: 78 NQANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLN 137
+ +GI+GG ++T++L K+V+ + D + +++ DR++F
Sbjct: 64 DPGPAIGILGGMGPEATVDLFAKIVRATPARVDQDHVRI---VIDNNPKIPDRTAF---- 116
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
+G G +++ L GA I++PC+ +H++ D + VP LH+
Sbjct: 117 LRGAGPDPVPAMVASIQ-----GLVSLGASLILIPCNTAHVYFDRLQAASPVPILHIMRE 171
Query: 198 VAKELKEANMKPL-EAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD---KATMEH 253
VA+ L L AG P G+LA + +G Y L G EVV+P +A +
Sbjct: 172 VARALVAGGAPGLPPAGGP--AGLLATELTVESGLYHRALAEVGLEVVVPAPEYQAEVTR 229
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDP 313
+ A D + E AR L A L+ R +I ++ +L P D +DP
Sbjct: 230 AIFGA-DGIKAGVYEPARQRLLEAGTHLVERGARVLIAGCTELPLVLRPGD-FPVPWVDP 287
Query: 314 MDALARSTIK 323
+ LAR+ ++
Sbjct: 288 AEILARAALQ 297
>gi|213864776|ref|ZP_03386895.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. M223]
Length = 172
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 164 AGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAK 223
AGA CIV+PC+ +H W D++ + + + ++ S +G+LA
Sbjct: 2 AGAECIVIPCNTAHYWFDDLQNVAKARMISILDATLGDIPP---------SARHVGLLAT 52
Query: 224 NAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLV 283
NA L G YQ+K G ++ P+ A + ++ A+ L R D A+ LL + L+
Sbjct: 53 NATLATGLYQKKALARGLTLIQPEDAG-QALVMQAIYTLKRGDKTAAQALLLPQIDSLIA 111
Query: 284 RAVNTVILASDDMQDLLPPDDPLLK-KCIDPMDALARSTIKWVKS 327
R +I+ ++ ++ + + ID +L R+ I+W +S
Sbjct: 112 RGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLVRAAIRWYES 156
>gi|299535194|ref|ZP_07048518.1| aspartate racemase [Lysinibacillus fusiformis ZC1]
gi|424737793|ref|ZP_18166241.1| aspartate racemase [Lysinibacillus fusiformis ZB2]
gi|298729315|gb|EFI69866.1| aspartate racemase [Lysinibacillus fusiformis ZC1]
gi|422948267|gb|EKU42651.1| aspartate racemase [Lysinibacillus fusiformis ZB2]
Length = 233
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 19/177 (10%)
Query: 79 QANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
+ T+GI+GG +T+ + +V+ + + D L +++ + DR+++ N
Sbjct: 2 KKQTLGIIGGVGPLATMFIGEMIVRRTKAQKDQDHL---HTIIDNDTNIPDRTAYILDNT 58
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
K V +I+E+ ++ L GA I +PC+ +H ++ E+ +G +P LH+
Sbjct: 59 KENPV----PVIIEDAKK----LASVGAHIIAIPCNTAHTFYQEIEEGSPIPVLHMIRET 110
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTL 255
AK + K R+G+LA LT+ YQE L+ G V+PD + +
Sbjct: 111 AKRAADLGAK--------RVGILATTGTLTSRMYQEALEQFGITPVVPDNEMRSYVM 159
>gi|89098523|ref|ZP_01171406.1| aspartate racemase [Bacillus sp. NRRL B-14911]
gi|89086768|gb|EAR65886.1| aspartate racemase [Bacillus sp. NRRL B-14911]
Length = 237
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 46/218 (21%)
Query: 79 QANTVGIVGGASVDST---LNLLGKLVQ--LSGEENDFPFLLCSDPLLNKELLSHDRSSF 133
+ T+G++GG S +ST + + +LVQ L G + S L L S D
Sbjct: 3 EMKTIGLIGGMSWESTSVYYSYINRLVQEKLGG--------IHSARCL---LYSFDFEEI 51
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
++L G + + +I E R FLE GA CIV+ + H+ +++ K C +P +H
Sbjct: 52 AALQRSGNWEKATEKMI-EAAR----FLETGGADCIVICTNTMHLMAEDLQKACRIPVIH 106
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME- 252
+ ECV +E+K+ ++ +G+L + FY++ L+ G +V++P++ E
Sbjct: 107 IVECVVEEIKKQGIEA--------VGLLGTKFTMEQTFYKKILEEHGIKVLVPEEGDRER 158
Query: 253 -HTLI---------------PALDALNRKDVEGARNLL 274
H +I LD ++R + +GA+ ++
Sbjct: 159 VHEVIFEELCRGKFKEDSKAAYLDIIHRLEKKGAQGII 196
>gi|421652183|ref|ZP_16092546.1| aspartate racemase [Acinetobacter baumannii OIFC0162]
gi|425750834|ref|ZP_18868788.1| aspartate racemase [Acinetobacter baumannii WC-348]
gi|445457298|ref|ZP_21446443.1| aspartate racemase [Acinetobacter baumannii OIFC047]
gi|408506456|gb|EKK08164.1| aspartate racemase [Acinetobacter baumannii OIFC0162]
gi|425484619|gb|EKU51019.1| aspartate racemase [Acinetobacter baumannii WC-348]
gi|444776878|gb|ELX00915.1| aspartate racemase [Acinetobacter baumannii OIFC047]
Length = 226
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 120 LLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRV--------FLEKAGARCIVM 171
LL+ + D+ ++ GG+ D L ++NL + LE++G I +
Sbjct: 13 LLDTSPATKDQEHIPTIVWNHGGIP-DRQLALKNLGESPLNAMLHGLKILERSGVSKIAI 71
Query: 172 PCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGF 231
PC+ +H WH ++ + + L++ E +++ +K ++G ++G+LA L+
Sbjct: 72 PCNTAHFWHSDLQQHTHIQILNMVEITVQQI----LKNYQSGD--KVGILATKGALSTQL 125
Query: 232 YQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVIL 291
YQ +L ++ +E +PA+ A+ R + A + + Q L+ + ++IL
Sbjct: 126 YQIELSKHSIPFIINSDEEIEQEFMPAVYAVKRNETAKAGIVFQELSQRLIDKGAGSIIL 185
Query: 292 ASDDMQ-DLLPPDDPLLKKCIDPMDALARSTIKW 324
A ++ L P+L D LA + + W
Sbjct: 186 ACTEIPIGLHAIQSPILDVSFDTTQILADACVNW 219
>gi|223477013|ref|YP_002581419.1| aspartate racemase [Thermococcus sp. AM4]
gi|214032239|gb|EEB73069.1| aspartate racemase [Thermococcus sp. AM4]
Length = 226
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 97/222 (43%), Gaps = 21/222 (9%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
+G++GG + +ST ++LS E+ P EL+ + + LN G
Sbjct: 4 IGLIGGTTPESTCYYYRNYIRLSREK--------FGPFTFPELIVYSINFDEFLNAPDGW 55
Query: 143 VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKEL 202
LI N R LE+AGA I + + HI +V + SVP + + + + +E+
Sbjct: 56 EGRKRILI--NAARA---LERAGAEVIALTANTPHIVFPDVQRAVSVPMVSIIDALIEEM 110
Query: 203 KEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDAL 262
K ++ ++ +L +TA FY+E L GFEVV+P+ +E + L
Sbjct: 111 KRRGVR--------KVLLLGTKTTMTADFYREALLKAGFEVVVPEGDEIEEVNRIIFEEL 162
Query: 263 NRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
+D+ LL + + R + VIL ++ + P D
Sbjct: 163 AFEDLRSKPYLLSLVERYREERGIEGVILGCTELPLAIRPGD 204
>gi|261492724|ref|ZP_05989272.1| putative aspartate racemase [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261495661|ref|ZP_05992107.1| putative aspartate racemase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261308768|gb|EEY10025.1| putative aspartate racemase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261311577|gb|EEY12732.1| putative aspartate racemase [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 231
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 113/257 (43%), Gaps = 40/257 (15%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLN 137
N +GI+GG +T ++ K ++L+ + D P L+ S P + DR+ + N
Sbjct: 4 NIIGILGGMGPAATADMFQKFIRLTPADCDQAHIPLLISSIPDIP------DRTRYILAN 57
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
+ ++ +E L E AGA CI++ C+ +H W + + V L + +C
Sbjct: 58 GENPAPVMEKY--IEGL-------ESAGATCIIIACNTAHYWFEHLKAKSQVEMLSMIDC 108
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP----DKATMEH 253
V E+ + + R+G+LA +A L Y+++L+ +G + P KA M+
Sbjct: 109 VVDEVLKCGKR--------RVGLLATDATLAVELYKKQLEAQGLTFICPTENGQKAVMDS 160
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPD---DPLLKKC 310
+ L ++E A L+ L+ +IL ++ +L + +P+ +
Sbjct: 161 IYL-----LKSGELEKATELMLQQRDELIRLGAEVIILGCTEVPIILAQEIEREPM--RY 213
Query: 311 IDPMDALARSTIKWVKS 327
+D L + I W ++
Sbjct: 214 VDSTLVLVKKAIDWYQT 230
>gi|254362765|ref|ZP_04978847.1| possible aspartate racemase [Mannheimia haemolytica PHL213]
gi|452744228|ref|ZP_21944076.1| aspartate racemase [Mannheimia haemolytica serotype 6 str. H23]
gi|153094394|gb|EDN75243.1| possible aspartate racemase [Mannheimia haemolytica PHL213]
gi|452087724|gb|EME04099.1| aspartate racemase [Mannheimia haemolytica serotype 6 str. H23]
Length = 231
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 116/257 (45%), Gaps = 40/257 (15%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLN 137
N +GI+GG +T ++ K ++L+ + D P L+ S P + DR+ + N
Sbjct: 4 NIIGILGGMGPAATADMFQKFIRLTPADCDQAHIPLLISSIPDIP------DRTRYILAN 57
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
+ ++ +E L E AGA CI++ C+ +H W + + V L + +C
Sbjct: 58 GENPAPVMEKY--IEGL-------ESAGATCIIIACNTAHYWFEHLKAKSQVEMLSMIDC 108
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP----DKATMEH 253
V E+ L+ G R+G+LA +A L Y+++L+ +G + P KA M+
Sbjct: 109 VVDEV-------LKCGK-WRVGLLATDATLAVDLYKKQLEAQGLTFICPTENGQKAVMDS 160
Query: 254 TLIPALDALNRKD---VEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKC 310
+ L + ++ L+R+ +V+++ I+ + +++ +P+ +
Sbjct: 161 IYLLKSGELEKATELMLQQRDELIRLGAEVIILGCTEVPIILAQEIE-----REPM--RY 213
Query: 311 IDPMDALARSTIKWVKS 327
+D L + I W ++
Sbjct: 214 VDSTLVLVKKAIDWYQT 230
>gi|332158923|ref|YP_004424202.1| aspartate racemase [Pyrococcus sp. NA2]
gi|331034386|gb|AEC52198.1| aspartate racemase [Pyrococcus sp. NA2]
Length = 228
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 112/245 (45%), Gaps = 27/245 (11%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEE--NDFP-FLLCSDPLLNKELLSHDRSSFSSLNC 138
+GI+GG +T +L ++V+ + E D P ++ ++P + DR+++
Sbjct: 3 VIGILGGMGPLATADLFRRIVEKTPAEKDQDHPKIIIFNNPQIP------DRTAY----I 52
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
G G LI + LE+ GA IVMPC+ +H + +++ K +P + + E
Sbjct: 53 LGKGEDPRPQLIWTAKK-----LEECGADFIVMPCNTAHAFIEDIRKSVKIPVISMIEET 107
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPA 258
AK +K+ K ++G++A + + Y +L G EV+ P + + +
Sbjct: 108 AKRVKDEGCK--------KVGLIATTGTIVSKVYHNELNKLGIEVLTPSEHEQDEVMKGI 159
Query: 259 LDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALA 318
+ ++E R +L + L R + +I ++ ++ +D L K IDPMD +A
Sbjct: 160 YQGVKAGNLELGRKILLGIAKKLEERGADCIIAGCTEVSVVINQED-LKAKLIDPMDIIA 218
Query: 319 RSTIK 323
+K
Sbjct: 219 EVAVK 223
>gi|398308384|ref|ZP_10511858.1| aspartate racemase [Bacillus mojavensis RO-H-1]
Length = 235
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 115/253 (45%), Gaps = 48/253 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST L K++ +L G +D +P ++ C P + HD
Sbjct: 2 IGILAGMGPKSTSPFLDKVIDYCQKLYGASHDIDYPQMMIYSCPTPFYVDRPIDHDEMKK 61
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
+ ++ G V+L EK GA I +PC+ +H++ +++ + S+P LH
Sbjct: 62 AIID---GAVKL----------------EKTGADFISLPCNTAHVYFEDIQQALSIPLLH 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME- 252
+ E KEL ++ K + VL +A + + YQ+ L+ G+E + E
Sbjct: 103 IIEETMKELPDSAQK---------VAVLGTDATIQSCLYQKGLKAGGYEFIHETHWQREV 153
Query: 253 HTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQ---DLLPPDDPLLKK 309
+ LI A+ N V+ +++ R L + + + + +I A D+ D + D P+
Sbjct: 154 NQLIAAIKQPNH--VQKTQDIWR-ELYLEIGKRADLIISACTDLNTVLDHVHGDIPI--- 207
Query: 310 CIDPMDALARSTI 322
ID D LA+ST+
Sbjct: 208 -IDSSDCLAKSTV 219
>gi|295676959|ref|YP_003605483.1| aspartate racemase [Burkholderia sp. CCGE1002]
gi|295436802|gb|ADG15972.1| aspartate racemase [Burkholderia sp. CCGE1002]
Length = 231
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 115/255 (45%), Gaps = 42/255 (16%)
Query: 82 TVGIVGGASVDST------LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSS 135
T+G++GG S +S+ LN K +L G N LL D F+S
Sbjct: 3 TIGVIGGMSWESSSEYYRLLNRHAK-TRLGGHHNARSLLLTVD--------------FAS 47
Query: 136 L--NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
+ N + G Q + + R+ LE+ GA +++ + H ++ + + +VPFLH
Sbjct: 48 IEANQRAGDWQALGEQMADAARQ----LERGGADLVILATNTMHRVYESIEQAITVPFLH 103
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLP--DKAT 250
+++ L+ A ++ R+G+L + FY +L+ G + ++P D+ T
Sbjct: 104 IADPTGAALRAAGVE--------RVGLLGTRYTMEQTFYTGRLRERYGLDTLVPDDDERT 155
Query: 251 MEHTLIPALDALNRKDVEGA-RNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKK 309
H +I D L +V+ A R + + ++ L R VIL ++ L+ P+D +L
Sbjct: 156 DVHRII--YDELCHGNVDDASRKVYQRVIEHLAARGAQAVILGCTEITLLIKPEDSVL-P 212
Query: 310 CIDPMDALARSTIKW 324
D A++ ++W
Sbjct: 213 VFDTTALHAQAAVEW 227
>gi|378764482|ref|YP_005193098.1| hypothetical protein SFHH103_06500 [Sinorhizobium fredii HH103]
gi|365184110|emb|CCF00959.1| hypothetical protein SFHH103_06500 [Sinorhizobium fredii HH103]
Length = 265
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 82/182 (45%), Gaps = 28/182 (15%)
Query: 74 DALLNQANTVGIVGGASVDSTLNLLGKLVQLSG---EENDFPFLLCSDPLLNKELLSHDR 130
D + +GI+GG +T++ + K++ + +++ P ++ P + DR
Sbjct: 24 DHQVRHKRLIGILGGMGPTATVDFMSKVISYTPAAVDQDHIPLIVHDVPQIP------DR 77
Query: 131 SSFSSLNCKGGGVQLDDSLI--VENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCS 188
SS V DD + + +R L+ AG I +PC+ +H WH+ + +GC
Sbjct: 78 SSAIE-------VGRDDPFLPMLSGVR----LLDAAGVEFIAIPCNTAHYWHERLSRGCR 126
Query: 189 VPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDK 248
LH+SE V +L E G P I V+A ++A Y ++L ++PD+
Sbjct: 127 AKILHISEAVVDQLLEL------PGKPRSIAVMATRGTISADIYGDQLLTAVDRRLIPDE 180
Query: 249 AT 250
T
Sbjct: 181 ET 182
>gi|323526636|ref|YP_004228789.1| aspartate racemase [Burkholderia sp. CCGE1001]
gi|323383638|gb|ADX55729.1| aspartate racemase [Burkholderia sp. CCGE1001]
Length = 232
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 111/258 (43%), Gaps = 36/258 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKL-----VQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSS 135
T+G++GG S +S++ L +L G N +L D F+
Sbjct: 2 KTIGVIGGMSWESSVEYYKLLNRHAKARLGGHHNARSLMLTVD--------------FAP 47
Query: 136 L--NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
+ N + G D + E + LE+ GA +++ + H ++ + + VPFLH
Sbjct: 48 IEANQRAG----DWHALGEQMADAARQLERGGAELVMLATNTMHRVYESIERAIHVPFLH 103
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATME 252
+++ L++A ++ R+G+L + FY +L+ G E ++PD+A
Sbjct: 104 IADPTGSALRKAGVE--------RVGLLGTRYTMEQTFYTGRLRERYGLETLVPDEAQRA 155
Query: 253 HTLIPALDALNRKDVEG-ARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCI 311
D L +V+ +R + + ++ L R VIL ++ L+ P+D L
Sbjct: 156 DVHRIIYDELCHGNVKSESRMVYQTVIESLRARGAEAVILGCTEITLLIKPEDSAL-PVF 214
Query: 312 DPMDALARSTIKWVKSAE 329
D A++ ++W ++E
Sbjct: 215 DTTALHAQAAVEWAVASE 232
>gi|398304928|ref|ZP_10508514.1| aspartate racemase [Bacillus vallismortis DV1-F-3]
Length = 227
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 109/253 (43%), Gaps = 48/253 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + K++ +L G +D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTSPFIDKVIDYCQKLYGASHDIDFPHMMIYSCPTPFYTDRPIDHEEMKR 61
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
+ ++ G V+L EK G I +PC+ +H++++EV + +VP LH
Sbjct: 62 AIID---GAVKL----------------EKTGVDFIALPCNTAHVYYEEVQQALAVPLLH 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME- 252
+++ KE+ K VL + + +G YQ+ L+ G EVV D
Sbjct: 103 ITKETVKEMPHTAKKA---------AVLGTESTIQSGIYQKGLKANGQEVVHKDHWQQAV 153
Query: 253 HTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQ---DLLPPDDPLLKK 309
+ LI A+ N + A L L + + + +I A D+ D + + P+
Sbjct: 154 NQLIAAIKQPNHTEQTHA---LWQKLYAEISQHADIIISACTDLNAVLDHIQSEIPI--- 207
Query: 310 CIDPMDALARSTI 322
ID D LA+ST+
Sbjct: 208 -IDSSDCLAKSTV 219
>gi|407714082|ref|YP_006834647.1| aspartate racemase [Burkholderia phenoliruptrix BR3459a]
gi|407236266|gb|AFT86465.1| aspartate racemase [Burkholderia phenoliruptrix BR3459a]
Length = 232
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 114/260 (43%), Gaps = 40/260 (15%)
Query: 81 NTVGIVGGASVDSTLNLLGKL-----VQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSS 135
T+G++GG S +S++ L +L G N +L D F+
Sbjct: 2 KTIGVIGGMSWESSVEYYKLLNRHAKARLGGHHNARSLMLTVD--------------FAP 47
Query: 136 L--NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
+ N + G D + E + LE+ GA +++ + H ++ + + VPFLH
Sbjct: 48 IEANQRAG----DWHALGEQMADAARQLERGGAELVMLATNTMHRVYESIERAIHVPFLH 103
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATME 252
+++ L++A ++ R+G+L + FY +L+ G E ++PD+A
Sbjct: 104 IADPTGSALRKAGVE--------RVGLLGTRYTMEQTFYTGRLRERYGLETLVPDEAERA 155
Query: 253 --HTLIPALDALNRKDVEG-ARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKK 309
H +I D L +V+ +R + + ++ L R VIL ++ L+ P+D L
Sbjct: 156 GVHRII--YDELCHGNVKSESRAVYQTVIESLRARGAEAVILGCTEITLLIKPEDSAL-P 212
Query: 310 CIDPMDALARSTIKWVKSAE 329
D A++ ++W ++E
Sbjct: 213 VFDTTALHAQAAVEWAIASE 232
>gi|298529163|ref|ZP_07016566.1| aspartate racemase [Desulfonatronospira thiodismutans ASO3-1]
gi|298510599|gb|EFI34502.1| aspartate racemase [Desulfonatronospira thiodismutans ASO3-1]
Length = 248
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 117/258 (45%), Gaps = 31/258 (12%)
Query: 77 LNQANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSL 136
+NQ VGI+GG ++T++L+ ++++L+ +D + C ++ ++ S +
Sbjct: 4 VNQEKIVGIIGGMGPEATVDLMSRVIRLTPALDDADHIRC--------IVDNNPKVPSRI 55
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
G ++++ R LE GA + MPC+ SH + ++ S+P L++ E
Sbjct: 56 KALIDGAGESPVPELQDMAR---CLEAWGADFLAMPCNTSHYYFQDIQGAVSIPMLNLIE 112
Query: 197 CVAKEL--KEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHT 254
+E+ ++ + ++G+L A++ G YQ+ G VV P+ A +
Sbjct: 113 ITVQEVLRQQPGID--------KVGILGSTALILTGLYQQAFAASGVRVVYPETACQDRV 164
Query: 255 LIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPM 314
++ D + + ++ A + ++ L + +++A ++ LLP D L P+
Sbjct: 165 MVLIKD-IKKGAMDLAFPVFESSVSSLETQGAQALVIACTELS-LLP--DASLSSAHQPL 220
Query: 315 ------DALARSTIKWVK 326
D LAR I+ K
Sbjct: 221 PRYDSSDILARDIIRTCK 238
>gi|390962188|ref|YP_006426022.1| putative aspartate racemase 2 [Thermococcus sp. CL1]
gi|390520496|gb|AFL96228.1| putative aspartate racemase 2 [Thermococcus sp. CL1]
Length = 235
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 111/246 (45%), Gaps = 28/246 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEEND--FP-FLLCSDPLLNKELLSHDRSSFSSLN 137
+GI+GG +T L ++V+ + + D P ++ ++P + DR++F
Sbjct: 4 KVIGILGGMGPLATAELFRRIVEKTPAKRDQEHPRIIIYNNPKIP------DRTAFILGK 57
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
+ +L DS RK LE GA I+MPC+ +H + + + + +P + + E
Sbjct: 58 GEDPRPELIDSA------RK---LESWGADFIIMPCNTAHFFAETIQRAIRIPLVSMVEE 108
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIP 257
A+ + ++ ++G+LA + + Y L G +V +P++ +
Sbjct: 109 TAERIARMGLR--------KVGLLATDGTIKGLVYHRALLRRGIQVAVPNRKDQGLVMKA 160
Query: 258 ALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDAL 317
D + +VE R LL + + L R V+ +I ++ L P+D L IDP+D +
Sbjct: 161 IYDGVKAGNVELGRKLL-LDVARRLERRVDGIIAGCTEVSVALKPED-LKVPLIDPLDVI 218
Query: 318 ARSTIK 323
A +K
Sbjct: 219 AERVVK 224
>gi|172063017|ref|YP_001810668.1| aspartate racemase [Burkholderia ambifaria MC40-6]
gi|171995534|gb|ACB66452.1| aspartate racemase [Burkholderia ambifaria MC40-6]
Length = 233
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 111/251 (44%), Gaps = 28/251 (11%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
VG++GG +T++ + ++++L+ D L P++ L S + L+ GG
Sbjct: 4 VGVLGGMGPLATVDFMHRVIRLTRARCDQEHL----PMIVANLTRTPDRSRAILD--GGA 57
Query: 143 VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKEL 202
L L L + G I +PC+ +H W+ + + + P LH+ +
Sbjct: 58 DPL------PALLDGVALLNRCGVDVIAIPCNSAHHWYAPLRECSAAPVLHIVD------ 105
Query: 203 KEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDAL 262
A++ + AG R+ VLA L +GFYQ L+ GFE V+P T + + + A+
Sbjct: 106 --ASVAAVPAGV-RRVAVLATGGTLVSGFYQAALRARGFEPVMP-AVTAQRDIAACIAAV 161
Query: 263 NRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPP--DDPLLKKCIDPMDALARS 320
V+ + L AL L R V ++ ++ D P ID LAR+
Sbjct: 162 KAGKVDASVRRLSRALATLARRDVGVAVMGCTEIPIAARALRDAPF--ALIDSTQELARA 219
Query: 321 TIKWVKSAEKG 331
T+ + +AE+G
Sbjct: 220 TVAY--AAERG 228
>gi|402569266|ref|YP_006618610.1| aspartate racemase [Burkholderia cepacia GG4]
gi|402250463|gb|AFQ50916.1| aspartate racemase [Burkholderia cepacia GG4]
Length = 233
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 113/251 (45%), Gaps = 28/251 (11%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
VG++GG +T++ + ++++L+ D L P++ L S + ++ GG
Sbjct: 4 VGVLGGMGPLATVDFMHRVIRLTRARCDQEHL----PMIVANLTQTPDRSRAIVD--GGA 57
Query: 143 VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKEL 202
L L L L + G I +PC+ +H W++ + + + P LH+ +
Sbjct: 58 DPLPALLDGVGL------LNRCGVDVIAIPCNSAHHWYEPMRERSAAPILHIVD------ 105
Query: 203 KEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDAL 262
A++ L AG R+ VLA L +GFYQ L+ GFE V+P A + + + A+
Sbjct: 106 --ASVAALPAGV-RRVAVLATGGTLVSGFYQAALRARGFEPVMPGAAA-QRDIAACIAAV 161
Query: 263 NRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPP--DDPLLKKCIDPMDALARS 320
++ + L AL L+ R V ++ ++ D P ID LAR+
Sbjct: 162 KAGRIDASVRCLSRALATLVRRDVGVAVMGCTEIPIAARALRDAPF--ALIDSTQELARA 219
Query: 321 TIKWVKSAEKG 331
T+ + + E+G
Sbjct: 220 TVTY--ALERG 228
>gi|317121724|ref|YP_004101727.1| aspartate racemase [Thermaerobacter marianensis DSM 12885]
gi|315591704|gb|ADU51000.1| aspartate racemase [Thermaerobacter marianensis DSM 12885]
Length = 296
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 110/251 (43%), Gaps = 19/251 (7%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGG 141
+GI+GG ++T++L K+V+ + D + +++ DR+++ +G
Sbjct: 54 AIGILGGMGPEATVDLFAKIVRATPARVDQDHVRV---IIDNNPKIPDRTAY----LRGC 106
Query: 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
G ++ V +R L GA I++PC+ +H++ D + VP LH+ VA+
Sbjct: 107 GPDPVPAM-VAGIR----GLVSLGATLILIPCNTAHVYFDRLQAESPVPILHIMREVARA 161
Query: 202 LKEAN--MKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTL--IP 257
L L AG P +G+LA + +G Y L G +V++P+ A I
Sbjct: 162 LAPGGDPAAGLAAGGP--VGLLATELTVASGLYHRALAEVGLQVLVPEPAYQAQVTRAIF 219
Query: 258 ALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDAL 317
D + AR L A L+ R +I ++ +L P D +DP + L
Sbjct: 220 GPDGIKAGVYGPARQRLLEAGAHLVERGARVLIAGCTELPLVLRPGD-FPVPWVDPAEIL 278
Query: 318 ARSTIKWVKSA 328
AR+ + V A
Sbjct: 279 ARAALARVLGA 289
>gi|296129577|ref|YP_003636827.1| aspartate racemase [Cellulomonas flavigena DSM 20109]
gi|296021392|gb|ADG74628.1| aspartate racemase [Cellulomonas flavigena DSM 20109]
Length = 244
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 114/248 (45%), Gaps = 22/248 (8%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
VG++GG +T+ L +V+ + E D + D ++ + DR+++ L G
Sbjct: 15 VGVIGGVGPAATVCFLDLVVRHTAAERDQDHV---DLVVLQHATIPDRTAYI-LGTSG-- 68
Query: 143 VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKEL 202
+ ++ + RR LE+ G +V+PC+ +H + DEV VP L + V + +
Sbjct: 69 -EDPGPVMAADARR----LERLGVGFVVVPCNTAHHFTDEVAAAVDVPVLSI---VDETV 120
Query: 203 KEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDAL 262
E +P A R+GVLA + L A YQ ++ G E V+PD A + + D +
Sbjct: 121 DEVAARPGVA----RVGVLATSGTLAARVYQRAIEARGLEAVVPDDADQDVVMGIIYDQV 176
Query: 263 NRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLL--KKCIDPMDALARS 320
L +A + L R + V+L ++ ++ + LL + +D +D LAR
Sbjct: 177 KAGRPADVAALHAVADR-LRERGADVVVLGCTELS-VVAAEHRLLDDARYVDSLDVLARR 234
Query: 321 TIKWVKSA 328
T++ A
Sbjct: 235 TVERAGHA 242
>gi|229491591|ref|ZP_04385412.1| aspartate racemase [Rhodococcus erythropolis SK121]
gi|229321272|gb|EEN87072.1| aspartate racemase [Rhodococcus erythropolis SK121]
Length = 265
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 114/253 (45%), Gaps = 28/253 (11%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND--FP-FLLCSDPLLNKELLSHDRSSFSSLNCK 139
+GI+GG +T + KLV L+ D P ++ +DP + DR+ L
Sbjct: 25 IGILGGMGPAATADFYSKLVALTPGSTDQEHPKVVIWADPTVP------DRT----LALT 74
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G LI R RV L ++GA + +PC+ +H + + P +H+ + VA
Sbjct: 75 ENGPDPTPWLI----RGARV-LRESGATTLAIPCNTAHAFLPAISSQLGHPVVHMIDEVA 129
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
+ ++ + P +G+LA + G YQ+ L +V++P A + ++PA+
Sbjct: 130 RHIR--TLSPAVTS----VGLLATTGTVRTGLYQQWLSEYSIDVLVPGPAIQDELVMPAI 183
Query: 260 DALNRKDV--EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDAL 317
A+ +V E L+R A LLV + V++A L P D + IDP L
Sbjct: 184 RAIKSGNVGDETTDKLVRAA--DLLVESGAQVVVAGCTEIPLGLPADATTCQIIDPATIL 241
Query: 318 ARSTIKWVKSAEK 330
AR+ ++ V A +
Sbjct: 242 ARALLRRVADARR 254
>gi|421656776|ref|ZP_16097073.1| aspartate racemase [Acinetobacter baumannii Naval-72]
gi|408503769|gb|EKK05522.1| aspartate racemase [Acinetobacter baumannii Naval-72]
Length = 241
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 95/214 (44%), Gaps = 16/214 (7%)
Query: 120 LLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRV--------FLEKAGARCIVM 171
LL+ + D+ ++ GG+ D L ++NL + LE++G I +
Sbjct: 28 LLDTSPATKDQEHIPTIVWNHGGIP-DRQLALKNLGESPLNAMLHGLKILERSGVSKIAI 86
Query: 172 PCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGF 231
PC+ +H WH ++ + + L++ E +++ + ++G +IG+LA L+
Sbjct: 87 PCNTAHFWHSDLQQHTHIQILNMVEITVQQI----LMNYQSGD--KIGILATKGALSTQL 140
Query: 232 YQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVIL 291
YQ +L ++ +E +PA+ A+ R + A + + Q L+ + ++IL
Sbjct: 141 YQIELSKHSIPFIINSDEEIEQEFMPAVYAVKRNETAKAGIVFQELSQRLIDKGAGSIIL 200
Query: 292 ASDDMQ-DLLPPDDPLLKKCIDPMDALARSTIKW 324
A ++ L P+L D LA + + W
Sbjct: 201 ACTEIPIGLHAIQSPILDVSFDTTKILADACVNW 234
>gi|226188079|dbj|BAH36183.1| probable aspartate racemase [Rhodococcus erythropolis PR4]
Length = 243
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 111/253 (43%), Gaps = 28/253 (11%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND--FP-FLLCSDPLLNKELLSHDRSSFSSLNCK 139
+GI+GG +T + KLV L+ D P ++ +DP + L+
Sbjct: 6 IGILGGMGPAATADFYSKLVALTPGSTDQEHPKVVIWADPTVPDRTLA------------ 53
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
+ D L R L ++GA + +PC+ +H + + +P +H+ + VA
Sbjct: 54 ---LTEDGPDPTPWLLRGARVLRESGATTLAIPCNTAHAFLPAISSQLGLPVVHMIDEVA 110
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
+ ++ + P + +G+LA + G YQ+ L +V++P A + ++PA+
Sbjct: 111 RHIR--TLSP----AVTSVGLLATTGTVRTGLYQQWLSEYSIDVLVPGPAIQDELVMPAI 164
Query: 260 DALNRKDV--EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDAL 317
A+ +V E L+R A LLV + V++A L P D + IDP L
Sbjct: 165 RAIKSGNVGDETTDKLVRAA--DLLVESGAQVVVAGCTEIPLGLPADATTCQIIDPATIL 222
Query: 318 ARSTIKWVKSAEK 330
AR+ + V A K
Sbjct: 223 ARALLLRVADARK 235
>gi|330819549|ref|YP_004348411.1| Aspartate racemase [Burkholderia gladioli BSR3]
gi|327371544|gb|AEA62899.1| Aspartate racemase [Burkholderia gladioli BSR3]
Length = 504
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 119/272 (43%), Gaps = 42/272 (15%)
Query: 59 ESKKSFGSKAAPFCSDALLNQANTVGIVGGASVDSTLNLLGKLVQ---LSGEENDFPFLL 115
+ + + G +A PF +G+VGG +T++ L KLV + +++ ++
Sbjct: 237 DREGAHGGQAEPF----------RIGVVGGVGPAATVDFLRKLVHHTPAARDQDHLKLIV 286
Query: 116 CSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHL 175
+P + DR++ + G G SL R LE+ GA+ + +PC+
Sbjct: 287 EQNPQIP------DRTA----HLVGEGPDPTVSLYAACKR-----LEQGGAKLVAIPCNT 331
Query: 176 SHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEK 235
+H + + + S+P +++ A+ L+E + E IGVLA + L +G Y+E
Sbjct: 332 AHAFVERIQPRLSIPIVNMLTVTARHLRERFPEARE------IGVLATSGTLASGVYREA 385
Query: 236 LQHEGFEVVLPDKATMEHTLIPALDALNRKD--VEG-ARNLLRIALQVLLVRAVNTVILA 292
L EGF ++P A + K V+G R + AL L+ V+L
Sbjct: 386 LAAEGFVQLVPPPALQARVMAAIYGEAGVKAGFVQGRCREDIEAALDALVAAGARVVLLG 445
Query: 293 SDDMQDLLPPDD---PLLKKC--IDPMDALAR 319
++ LLP + P + +DP + LAR
Sbjct: 446 CTELPLLLPAGEIAGPGGARVSLVDPTEVLAR 477
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 99/256 (38%), Gaps = 28/256 (10%)
Query: 80 ANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
A +GIVGG + +L KL++ +G +L PL + DR + +
Sbjct: 12 ARRLGIVGGLGPLAGADLYAKLMRAAGT-TPIDAILAQHPLCGA---APDREASA----- 62
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
+ L V +L R+ E+ G +V+PC LSH + DE+ S+ + + E V
Sbjct: 63 ------ERKLHVFDLIRE---FEQRGVTTVVLPCFLSHTFLDELRANTSLAIVDLVEAVR 113
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEHTLI 256
+ ++ A RIGVLA A ++ F + P D +
Sbjct: 114 EHVRRAWP------GARRIGVLASAATRERRLFERYFAAPEFSLCHPGEVDGIDAVTEAV 167
Query: 257 PALDALNRKDVEG-ARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMD 315
+D + ++G LLR A L+ + ++ ++ +L L +DP
Sbjct: 168 YGVDGIREGALDGRPVELLRRACASLIEQGAEVIVPGLTEIALVLDALGLLPVPLVDPNQ 227
Query: 316 ALARSTIKWVKSAEKG 331
AR + + G
Sbjct: 228 VYARRVLAADREGAHG 243
>gi|218234088|ref|YP_002367372.1| aspartate racemase [Bacillus cereus B4264]
gi|218162045|gb|ACK62037.1| aspartate racemase family protein [Bacillus cereus B4264]
Length = 226
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 77/148 (52%), Gaps = 15/148 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV + S+P LH+ + AKE+ E N+K RIG+
Sbjct: 69 VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLIPALDALNRKDVE--GARNLLRI 276
L + FY+ +L E ++P ++ T H +I LD L+R + + LL+I
Sbjct: 121 LGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVI--LDELSRGIISETSKKRLLQI 178
Query: 277 ALQVLLVRAVNTVILASDDMQDLLPPDD 304
+ L+ ++L ++ L+ +D
Sbjct: 179 T-KSLIQNGAEGILLGCTEIPLLISQND 205
>gi|297585520|ref|YP_003701300.1| aspartate racemase [Bacillus selenitireducens MLS10]
gi|297143977|gb|ADI00735.1| aspartate racemase [Bacillus selenitireducens MLS10]
Length = 232
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 27/170 (15%)
Query: 83 VGIVGGASVDSTLNL---LGKLVQL-SGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
+G++GG S +ST++ + +LV+ G + P + S D + ++ +
Sbjct: 4 IGLIGGMSWESTVSYYEAMNRLVRTRKGGLHSLPVYMASV----------DFAPYAHMQK 53
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
+G D + I L ++ + LEKAGA IV+ + H D++ G S+PFLH+ +
Sbjct: 54 EG-----DWNGIGRQLNQEALRLEKAGAEAIVLATNTMHAVADDIASGLSIPFLHIGDVA 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDK 248
AK++ +K +G+L + + FY E+L G + ++P +
Sbjct: 109 AKKISSQGLK--------TVGLLGTSFTMEQPFYHERLNANGIQTLIPSE 150
>gi|228958869|ref|ZP_04120575.1| Aspartate racemase [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|229110094|ref|ZP_04239670.1| Aspartate racemase [Bacillus cereus Rock1-15]
gi|229148078|ref|ZP_04276413.1| Aspartate racemase [Bacillus cereus BDRD-ST24]
gi|296503209|ref|YP_003664909.1| aspartate racemase [Bacillus thuringiensis BMB171]
gi|423586946|ref|ZP_17563033.1| aspartate racemase [Bacillus cereus VD045]
gi|423627712|ref|ZP_17603461.1| aspartate racemase [Bacillus cereus VD154]
gi|423642353|ref|ZP_17617971.1| aspartate racemase [Bacillus cereus VD166]
gi|423648523|ref|ZP_17624093.1| aspartate racemase [Bacillus cereus VD169]
gi|228635383|gb|EEK91878.1| Aspartate racemase [Bacillus cereus BDRD-ST24]
gi|228673286|gb|EEL28554.1| Aspartate racemase [Bacillus cereus Rock1-15]
gi|228800806|gb|EEM47717.1| Aspartate racemase [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|296324261|gb|ADH07189.1| aspartate racemase [Bacillus thuringiensis BMB171]
gi|401229098|gb|EJR35614.1| aspartate racemase [Bacillus cereus VD045]
gi|401271009|gb|EJR77027.1| aspartate racemase [Bacillus cereus VD154]
gi|401277296|gb|EJR83240.1| aspartate racemase [Bacillus cereus VD166]
gi|401284021|gb|EJR89887.1| aspartate racemase [Bacillus cereus VD169]
Length = 226
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 77/148 (52%), Gaps = 15/148 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV + S+P LH+ + AKE+ E N+K RIG+
Sbjct: 69 VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLIPALDALNRKDVE--GARNLLRI 276
L + FY+ +L E ++P ++ T H +I LD L+R + + LL+I
Sbjct: 121 LGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVI--LDELSRGIISETSKKRLLQI 178
Query: 277 ALQVLLVRAVNTVILASDDMQDLLPPDD 304
+ L+ ++L ++ L+ +D
Sbjct: 179 T-KSLIQNGAEGILLGCTEIPLLISQND 205
>gi|57640439|ref|YP_182917.1| aspartate racemase [Thermococcus kodakarensis KOD1]
gi|57158763|dbj|BAD84693.1| aspartate racemase [Thermococcus kodakarensis KOD1]
Length = 232
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 112/252 (44%), Gaps = 28/252 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLS--GEENDFP-FLLCSDPLLNKELLSHDRSSFSSLN 137
+GI+GG +T +L ++V+ + + D P ++ ++P + DR++F
Sbjct: 4 RVIGILGGMGPLATADLFRRIVERTPARRDQDHPRIIIYNNPKIP------DRTAF---- 53
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
G G LI + LE GA I+MPC+ +H + + + + ++P + + E
Sbjct: 54 ILGNGPDPRPELIASAKK-----LESWGADFIIMPCNTAHFFAETIQRAINIPLVSMIEE 108
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIP 257
AK+++ ++ ++G+LA + + Y L G + +P+K +
Sbjct: 109 TAKKIESMGLR--------KVGLLATDGTIKGMVYHRALLKRGIHIAVPNKKDQGLVMKA 160
Query: 258 ALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDAL 317
+ + ++E R LL + + L R +I ++ +L +D L IDPMD +
Sbjct: 161 IYEGVKAGNLELGRELL-LKVAKKLERRSEGIIAGCTEVSVVLKSED-LNVPLIDPMDVI 218
Query: 318 ARSTIKWVKSAE 329
A +K AE
Sbjct: 219 AERAVKLALGAE 230
>gi|228965574|ref|ZP_04126656.1| Aspartate racemase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|402560108|ref|YP_006602832.1| aspartate racemase [Bacillus thuringiensis HD-771]
gi|228794167|gb|EEM41688.1| Aspartate racemase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|401788760|gb|AFQ14799.1| aspartate racemase [Bacillus thuringiensis HD-771]
Length = 226
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 79/148 (53%), Gaps = 15/148 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV + S+P LH+ + AKE+ + N+K RIG+
Sbjct: 69 VEKSGADCLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMVKQNIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKA--TMEHTLIPALDALNRKDVEGA--RNLLRI 276
L + FY+ +L E ++P++ T+ H +I LD L++ + A LL+I
Sbjct: 121 LGTKQTMEQDFYKSRLAKYNIETIIPNEEERTVIHHVI--LDELSKGIISEASKEKLLQI 178
Query: 277 ALQVLLVRAVNTVILASDDMQDLLPPDD 304
+ L+ ++L ++ L+ P+D
Sbjct: 179 T-KSLIQNGAEGILLGCTEIPLLISPND 205
>gi|4001718|dbj|BAA35091.1| aspartate racemase [Thermococcus sp. KS-8]
Length = 232
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 108/252 (42%), Gaps = 28/252 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLS--GEENDFP-FLLCSDPLLNKELLSHDRSSFSSLN 137
+GI+GG +T +L ++V+ + + D P ++ ++P + DR++F
Sbjct: 4 RVIGILGGMGPLATADLFRRIVEKTPAKRDQDHPRIIIYNNPKIP------DRTAF---- 53
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
G G LI + LE+ GA I+MPC+ +H + + P + + E
Sbjct: 54 ILGNGPDPRPELITSARK-----LEECGADFIIMPCNTAHFFAGTIQSSVIYPLVSMIEE 108
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIP 257
AK ++E ++ ++G+LA + + Y L G + +P+K +
Sbjct: 109 TAKRIEEMGLR--------KVGLLATDGTIKGMVYHRALLKRGIHIAVPNKKDQGLVMKA 160
Query: 258 ALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDAL 317
+ + ++E R LL + + L R +I ++ +L P D L IDPMD +
Sbjct: 161 IYEGVKAGNLELGRELL-LKVAKKLERRSEGIIAGCTEVSVVLKPGD-LTVPLIDPMDVI 218
Query: 318 ARSTIKWVKSAE 329
A +K E
Sbjct: 219 AERAVKLALGVE 230
>gi|206972488|ref|ZP_03233433.1| aspartate racemase family protein [Bacillus cereus AH1134]
gi|229178917|ref|ZP_04306276.1| Aspartate racemase [Bacillus cereus 172560W]
gi|423413595|ref|ZP_17390715.1| aspartate racemase [Bacillus cereus BAG3O-2]
gi|423430620|ref|ZP_17407624.1| aspartate racemase [Bacillus cereus BAG4O-1]
gi|423580919|ref|ZP_17557030.1| aspartate racemase [Bacillus cereus VD014]
gi|423636651|ref|ZP_17612304.1| aspartate racemase [Bacillus cereus VD156]
gi|206732648|gb|EDZ49825.1| aspartate racemase family protein [Bacillus cereus AH1134]
gi|228604570|gb|EEK62032.1| Aspartate racemase [Bacillus cereus 172560W]
gi|401100322|gb|EJQ08317.1| aspartate racemase [Bacillus cereus BAG3O-2]
gi|401119243|gb|EJQ27066.1| aspartate racemase [Bacillus cereus BAG4O-1]
gi|401215684|gb|EJR22399.1| aspartate racemase [Bacillus cereus VD014]
gi|401274479|gb|EJR80451.1| aspartate racemase [Bacillus cereus VD156]
Length = 226
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 12/106 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV + S+P LH+ + AKE+ E N+K RIG+
Sbjct: 69 VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLIPALDALNR 264
L + FY+ +L E ++P ++ T H +I LD L+R
Sbjct: 121 LGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVI--LDELSR 164
>gi|228939755|ref|ZP_04102335.1| Aspartate racemase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228972637|ref|ZP_04133239.1| Aspartate racemase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228979226|ref|ZP_04139567.1| Aspartate racemase [Bacillus thuringiensis Bt407]
gi|384186694|ref|YP_005572590.1| aspartate racemase [Bacillus thuringiensis serovar chinensis CT-43]
gi|410675000|ref|YP_006927371.1| aspartate racemase [Bacillus thuringiensis Bt407]
gi|452199048|ref|YP_007479129.1| aspartate racemase family protein [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|228780502|gb|EEM28728.1| Aspartate racemase [Bacillus thuringiensis Bt407]
gi|228787078|gb|EEM35055.1| Aspartate racemase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228819914|gb|EEM65959.1| Aspartate racemase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|326940403|gb|AEA16299.1| aspartate racemase [Bacillus thuringiensis serovar chinensis CT-43]
gi|409174129|gb|AFV18434.1| aspartate racemase [Bacillus thuringiensis Bt407]
gi|452104441|gb|AGG01381.1| aspartate racemase family protein [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 226
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 12/106 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV + S+P LH+ + AKE+ E N+K RIG+
Sbjct: 69 VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLIPALDALNR 264
L + FY+ +L E ++P ++ T H +I LD L+R
Sbjct: 121 LGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVI--LDELSR 164
>gi|228921319|ref|ZP_04084644.1| Aspartate racemase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228838333|gb|EEM83649.1| Aspartate racemase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
Length = 226
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 12/106 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV + S+P LH+ + AKE+ E N+K RIG+
Sbjct: 69 VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLIPALDALNR 264
L + FY+ +L E ++P ++ T H +I LD L+R
Sbjct: 121 LGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVI--LDELSR 164
>gi|229153749|ref|ZP_04281890.1| Aspartate racemase [Bacillus cereus m1550]
gi|228629702|gb|EEK86389.1| Aspartate racemase [Bacillus cereus m1550]
Length = 226
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 77/148 (52%), Gaps = 15/148 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +E+ + S+P LH+ + AKE+ E N+K RIG+
Sbjct: 69 VEKSGAECLLMCSNTVHLFAEEIEQAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLIPALDALNRKDVE--GARNLLRI 276
L + FY+ +L E ++P ++ T H +I LD L+R + + LL+I
Sbjct: 121 LGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVI--LDELSRGIISETSKKRLLQI 178
Query: 277 ALQVLLVRAVNTVILASDDMQDLLPPDD 304
+ L+ ++L ++ L+ +D
Sbjct: 179 T-KSLIQNGAEGILLGCTEIPLLISQND 205
>gi|229190733|ref|ZP_04317728.1| Aspartate racemase [Bacillus cereus ATCC 10876]
gi|228592758|gb|EEK50582.1| Aspartate racemase [Bacillus cereus ATCC 10876]
Length = 226
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 12/106 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV + S+P LH+ + AKE+ E N+K RIG+
Sbjct: 69 VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLIPALDALNR 264
L + FY+ +L E ++P ++ T H +I LD L+R
Sbjct: 121 LGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVI--LDELSR 164
>gi|228908369|ref|ZP_04072213.1| Aspartate racemase [Bacillus thuringiensis IBL 200]
gi|228851277|gb|EEM96087.1| Aspartate racemase [Bacillus thuringiensis IBL 200]
Length = 226
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 12/106 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV + S+P LH+ + AKE+ E N+K RIG+
Sbjct: 69 VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLIPALDALNR 264
L + FY+ +L E ++P ++ T H +I LD L+R
Sbjct: 121 LGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVI--LDELSR 164
>gi|295701003|ref|YP_003608896.1| aspartate racemase [Burkholderia sp. CCGE1002]
gi|295440216|gb|ADG19385.1| aspartate racemase [Burkholderia sp. CCGE1002]
Length = 233
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 119/257 (46%), Gaps = 40/257 (15%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+GI+GG +T++ + K+V+L+ +D P L+ + P + DRSS
Sbjct: 4 IGILGGMGPLATVDFMDKIVRLTHANSDQEHLPLLVANLPHIE------DRSSAI---ID 54
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE-CV 198
GG L L +L L + G I +PC+ +H W++ + P LH+++ CV
Sbjct: 55 GGADPLPALLDGIDL------LNRNGVGLIAIPCNSAHHWYEPMRARSKAPVLHIAQTCV 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPA 258
A + A R+ +LA L +GFYQ+ L E VLPD+ +M+ +
Sbjct: 109 AAVPRAAR----------RVALLATGGALVSGFYQQALADLDIEPVLPDE-SMQLRVAAC 157
Query: 259 LDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM----QDLLPPDDPLLKKCIDPM 314
+ + ++ A L L L + V T ++A ++ + + P PL+ +D
Sbjct: 158 IREVKAGKLDAAGAHLEDVLIALASQGVGTALMACTEIPLAARHIASP--PLI--LVDSS 213
Query: 315 DALARSTIKWVKSAEKG 331
LAR+T+K+ + E+G
Sbjct: 214 LELARATVKY--ACERG 228
>gi|171321276|ref|ZP_02910240.1| aspartate racemase [Burkholderia ambifaria MEX-5]
gi|171093448|gb|EDT38627.1| aspartate racemase [Burkholderia ambifaria MEX-5]
Length = 233
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 160 FLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIG 219
L + G I +PC+ +H W+ + + +VP LH+ + A++ L AG R+
Sbjct: 69 LLNRCGVDVIAIPCNTAHHWYAPLRERSAVPILHIVD--------ASVAALPAGL-RRVA 119
Query: 220 VLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQ 279
VLA L +G YQ L+ GFE V+P A + ++ + A+ ++ + L AL
Sbjct: 120 VLATGGTLVSGLYQAALRARGFEPVMPGVAA-QRDIVACIAAVKAGKIDASARCLTRALA 178
Query: 280 VLLVRAVNTVILASDDMQDLLPP--DDPLLKKCIDPMDALARSTIKWVKSAEKG 331
L R V ++ ++ D P ID LAR+T+ + +AE+G
Sbjct: 179 TLARRDVGVAVMGCTEIPIAARALRDAPF--ALIDSTQELARATVAY--AAERG 228
>gi|337270251|ref|YP_004614306.1| aspartate racemase [Mesorhizobium opportunistum WSM2075]
gi|336030561|gb|AEH90212.1| aspartate racemase [Mesorhizobium opportunistum WSM2075]
Length = 269
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
L + G CI +PC+ +H W+D++ LH+ + V E + + L+ G ++ +
Sbjct: 76 LNELGVSCIAVPCNTAHHWYDQLAANSQARILHIGDAVVAETR----RSLDRG---QVAI 128
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
LA L +GFYQ+++ GF + LP +H + A+
Sbjct: 129 LATRGTLVSGFYQDRMSAAGFGLCLPADTEFQHCVDSAI 167
>gi|223477144|ref|YP_002581435.1| aspartate racemase [Thermococcus sp. AM4]
gi|214032370|gb|EEB73200.1| Aspartate racemase [Thermococcus sp. AM4]
Length = 234
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 108/246 (43%), Gaps = 28/246 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLV--QLSGEENDFP-FLLCSDPLLNKELLSHDRSSFSSLN 137
T+GI+GG +T L ++V + + D P ++ ++P + DR++F
Sbjct: 3 RTIGILGGMGPLATAELFRRIVVKTPAKRDQDHPRIIIYNNPKIP------DRTAF---- 52
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
G G LI + LE GA I+MPC+ +H + + + + +P + + E
Sbjct: 53 ILGKGPDPRPELIDSAKK-----LESWGADFIIMPCNTAHFFAETIQRAIRIPLVSMVEE 107
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIP 257
A+ +KE ++ ++G+LA + + Y L G + +P K +
Sbjct: 108 TAERVKEMGLR--------KVGLLATDGTVKGLVYHRALLKRGISIAVPGKNDQRLVMRG 159
Query: 258 ALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDAL 317
+ + ++E R LL + + L + V +I ++ L P+D L IDPMD +
Sbjct: 160 IYEGVKAGNLELGRELL-LKVAKKLEKRVEGIIAGCTEVSVALRPED-LSVPLIDPMDVI 217
Query: 318 ARSTIK 323
A +K
Sbjct: 218 AEKAVK 223
>gi|115358254|ref|YP_775392.1| aspartate racemase [Burkholderia ambifaria AMMD]
gi|115283542|gb|ABI89058.1| aspartate racemase [Burkholderia ambifaria AMMD]
Length = 233
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 111/251 (44%), Gaps = 28/251 (11%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
VG++GG +T++ + ++++L+ D L P++ L S + L+ GG
Sbjct: 4 VGVLGGMGPLATVDFMHRVIRLTRARCDQEHL----PMIVANLTRTPDRSRAILD--GGA 57
Query: 143 VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKEL 202
L L L + G I +PC+ +H W+ + + + P LH+ +
Sbjct: 58 DPL------PALLDGVALLNRCGVDVIAIPCNSAHHWYAPLRERSAAPVLHIVD------ 105
Query: 203 KEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDAL 262
A++ + AG R+ VLA L +GFYQ L+ GFE V+P A + + + A+
Sbjct: 106 --ASVAAVPAGV-RRVAVLATGGTLVSGFYQAALRARGFEPVMPAVAA-QRDIAACIAAV 161
Query: 263 NRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPP--DDPLLKKCIDPMDALARS 320
++ + L AL L R V ++ ++ D P ID LAR+
Sbjct: 162 KAGKIDASVRRLSRALATLARRDVGVAVMGCTEIPIAARALRDAPF--ALIDSTQELARA 219
Query: 321 TIKWVKSAEKG 331
T+ + +AE+G
Sbjct: 220 TVAY--AAERG 228
>gi|225573795|ref|ZP_03782550.1| hypothetical protein RUMHYD_01997 [Blautia hydrogenotrophica DSM
10507]
gi|225038823|gb|EEG49069.1| aspartate racemase [Blautia hydrogenotrophica DSM 10507]
Length = 235
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 111/254 (43%), Gaps = 29/254 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFL-LCSDPLLNKELLSHDRSSFSSLNCK 139
T+GI+GG +T +L K++Q++ D + +C D N E+ DR++ + K
Sbjct: 3 KTIGILGGMGPLATCDLFSKIIQITDASCDQEHVRICIDN--NTEI--SDRTNAIIRHGK 58
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
V + + V L+ GA ++MPC+ +H ++D + +PFL + + A
Sbjct: 59 DP---------VPEMVKSAVRLQSFGADVLIMPCNTAHYFYDRILPFVDIPFLSMIDETA 109
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
K + + ++ +IG+LA + L Y++ + G +V+P H +
Sbjct: 110 KAISDRGLR--------KIGLLATDGTLQTAVYEKAFKKRGISIVVPPPENQVHIMDLIY 161
Query: 260 DALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQ---DLLPPDDPLLKKCIDPMDA 316
+ + + E + ++ L + T++L ++ DL D P DP
Sbjct: 162 NGVKAGNKEIDTKPTKKTIEDLFRKGAQTLVLGCTELPVAFDLYGFDYPK----TDPTLI 217
Query: 317 LARSTIKWVKSAEK 330
LA +++V + K
Sbjct: 218 LASRAVQFVGAKVK 231
>gi|423398915|ref|ZP_17376115.1| aspartate racemase [Bacillus cereus BAG2X1-1]
gi|423481285|ref|ZP_17457975.1| aspartate racemase [Bacillus cereus BAG6X1-2]
gi|401146045|gb|EJQ53565.1| aspartate racemase [Bacillus cereus BAG6X1-2]
gi|401645765|gb|EJS63404.1| aspartate racemase [Bacillus cereus BAG2X1-1]
Length = 241
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 112/250 (44%), Gaps = 25/250 (10%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGG 141
VGI+GG +T++L+ K++ + P + D + +++ + S
Sbjct: 11 VVGIIGGMGPLATVDLMNKIISYT------PAMKDQDHI---HIIADNYSQIPDRTTAIL 61
Query: 142 GVQLDDS-LIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
G +D + IV++ +R L+ AGA +V+ C+ +H ++ K ++P LH+ A+
Sbjct: 62 GKGIDPTPYIVQSAQR----LQNAGADFLVIACNTAHFFYKAAKKSVNIPILHMPLETAR 117
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALD 260
++E N + ++G+LA + + YQ Q +V+ PD+ M+ ++ +
Sbjct: 118 FVQENNFR--------KVGLLATDGTIKTELYQNSCQRYRIDVIEPDR-KMQEKVMEGIY 168
Query: 261 ALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARS 320
A+ D+E L + L +I ++ +L + + IDP + +A+
Sbjct: 169 AIKSGDLETGFLYLSMVANKLKDSGAEAIIAGCTEIPLVLKSSENIC--VIDPTEIVAKM 226
Query: 321 TIKWVKSAEK 330
IK EK
Sbjct: 227 VIKKANRKEK 236
>gi|47569596|ref|ZP_00240273.1| aspartate racemase [Bacillus cereus G9241]
gi|47553711|gb|EAL12085.1| aspartate racemase [Bacillus cereus G9241]
Length = 226
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 72/145 (49%), Gaps = 9/145 (6%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV S+P LH+ + AKE+ E N+K RIG+
Sbjct: 69 VEKSGAECLLMCSNTVHLFAEEVESAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDV-EGARNLLRIALQ 279
L + FY+ +L + E ++P+K L+ L++ + E ++ L +
Sbjct: 121 LGTKQTMEQDFYKSRLANYNIETIIPNKEERNFIHHVILNELSKGIISETSKEKLLQITK 180
Query: 280 VLLVRAVNTVILASDDMQDLLPPDD 304
L+ ++L ++ L+ DD
Sbjct: 181 SLIQNGAEGILLGCTEIPLLISQDD 205
>gi|384180536|ref|YP_005566298.1| putative racemase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324326620|gb|ADY21880.1| putative racemase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 226
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV S+P LH+ + AKE+ + N+K RIG+
Sbjct: 69 VEKSGAECLLMCSNTVHLFAEEVENAISIPLLHIGDVSAKEMVDQNIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDK 248
L + FY+ +L H E ++P++
Sbjct: 121 LGTKQTMEQDFYKSRLAHYNIETIIPNE 148
>gi|42781724|ref|NP_978971.1| aspartate racemase [Bacillus cereus ATCC 10987]
gi|402557146|ref|YP_006598417.1| aspartate racemase [Bacillus cereus FRI-35]
gi|423372541|ref|ZP_17349881.1| aspartate racemase [Bacillus cereus AND1407]
gi|42737647|gb|AAS41579.1| aspartate racemase family protein [Bacillus cereus ATCC 10987]
gi|401098978|gb|EJQ06988.1| aspartate racemase [Bacillus cereus AND1407]
gi|401798356|gb|AFQ12215.1| aspartate racemase [Bacillus cereus FRI-35]
Length = 226
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV S+P LH+ + AKE+ E N+K RIG+
Sbjct: 69 VEKSGAECLLMCSNTVHLFAEEVESAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDK 248
L + FY+ +L + E ++P+K
Sbjct: 121 LGTKQTMEQDFYKSRLANYSIETIIPNK 148
>gi|402301090|ref|ZP_10820499.1| aspartate racemase [Bacillus alcalophilus ATCC 27647]
gi|401723779|gb|EJS97209.1| aspartate racemase [Bacillus alcalophilus ATCC 27647]
Length = 245
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 85/175 (48%), Gaps = 26/175 (14%)
Query: 77 LNQANTVGIVGGASVDSTLNLLGKLV---QLSGEENDFPFLLCSDPLLNKELLSHDRSSF 133
+NQ T+GI+GG +T++L K++ ++S +++ P L+ + N + S +
Sbjct: 1 MNQ--TIGILGGMGPLATVDLAEKIILLTKVSRDQDHIPLLIYN----NTRIPSRVNAIM 54
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
+S +VE ++ +V LEKAG IVMPCH +H W +++ K P L+
Sbjct: 55 DQ----------QESPVVELIKTAKV-LEKAGVDFIVMPCHTAHYWLEDIQKHIHTPILN 103
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDK 248
+ E +K + +I +LA + + A YQ+ Q E ++ +P K
Sbjct: 104 MIENTVHFVKNS------INGEKQILLLATSGTVKAQLYQKAFQSEDVQLAIPTK 152
>gi|409096862|ref|ZP_11216886.1| aspartate racemase [Thermococcus zilligii AN1]
Length = 235
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 114/254 (44%), Gaps = 28/254 (11%)
Query: 80 ANTVGIVGGASVDSTLNLLGKLVQLS--GEENDFP-FLLCSDPLLNKELLSHDRSSFSSL 136
+GI+GG +T +L ++V+ + + D P ++ ++P + DR++F
Sbjct: 3 GRVIGILGGMGPLATADLFRRIVEKTPAKRDQDHPRIIIYNNPKIP------DRTAF--- 53
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
G G LI + LE GA IVMPC+ +H + + + + S+P + + E
Sbjct: 54 -ILGHGDDPRPELIASARK-----LESWGADFIVMPCNTAHFFAETIQRAISIPLVSMVE 107
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
AK ++E ++ ++G++A + + Y L G ++ +P+K E +
Sbjct: 108 ETAKVVREMGLR--------KVGLIATDGTIKGLIYHRALLEHGVQIAVPNKTNQEKVMR 159
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDA 316
+ + ++E R LL + L R+ + +I + L P+D L IDPMD
Sbjct: 160 GIYEGVKAGNLELGRRLLLEVAKRLEKRS-DGIIAGCTEASVALKPED-LSAPLIDPMDI 217
Query: 317 LARSTIKWVKSAEK 330
+A +K E+
Sbjct: 218 IAEKAVKLALGEEE 231
>gi|296330339|ref|ZP_06872820.1| aspartate racemase [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305676056|ref|YP_003867728.1| aspartate racemase [Bacillus subtilis subsp. spizizenii str. W23]
gi|296152607|gb|EFG93475.1| aspartate racemase [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305414300|gb|ADM39419.1| aspartate racemase [Bacillus subtilis subsp. spizizenii str. W23]
Length = 227
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 110/252 (43%), Gaps = 46/252 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + K++ +L G ND +P ++ C P + H
Sbjct: 2 IGILAGMGPRSTSPFIDKVIDYCQKLYGASNDIDYPHMMICSCPTPFYADRPIDHGEMKR 61
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
+ ++ G V+L EK G I +PC+ +H++++E+ + SVP LH
Sbjct: 62 AIID---GAVKL----------------EKTGVDFIALPCNTAHVYYEEIQQVLSVPLLH 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ E KE+ + K + VL ++ + + YQ+ L+ G EVV D +H
Sbjct: 103 IIEETIKEIPHSAKKGV---------VLGTDSTIQSAIYQKGLKANGQEVVHKDH--WQH 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQ---DLLPPDDPLLKKC 310
++ + A+ + + L L + + + +I A D+ D + + P+
Sbjct: 152 SVNQLIAAIKQPNHTQHTQALWQTLYEEISQHADIIISACTDLNAVLDHIQSEIPI---- 207
Query: 311 IDPMDALARSTI 322
ID D LA+ST+
Sbjct: 208 IDSSDCLAKSTV 219
>gi|228985744|ref|ZP_04145894.1| Aspartate racemase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|229156233|ref|ZP_04284329.1| Aspartate racemase [Bacillus cereus ATCC 4342]
gi|228627108|gb|EEK83839.1| Aspartate racemase [Bacillus cereus ATCC 4342]
gi|228773916|gb|EEM22332.1| Aspartate racemase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 226
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 72/145 (49%), Gaps = 9/145 (6%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV S+P LH+ + AKE+ E N+K RIG+
Sbjct: 69 VEKSGAECLLMCSNTVHLFAEEVENAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDV-EGARNLLRIALQ 279
L + FY+ +L + E ++P+K L+ L++ + E ++ L +
Sbjct: 121 LGTKQTMEQDFYKSRLANFNIETIIPNKEERNFIHHVILNELSKGIISETSKEKLLQITK 180
Query: 280 VLLVRAVNTVILASDDMQDLLPPDD 304
L+ ++L ++ L+ DD
Sbjct: 181 SLIQNGAEGILLGCTEIPLLISQDD 205
>gi|424741902|ref|ZP_18170237.1| aspartate racemase [Acinetobacter baumannii WC-141]
gi|422944334|gb|EKU39330.1| aspartate racemase [Acinetobacter baumannii WC-141]
Length = 241
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 94/214 (43%), Gaps = 16/214 (7%)
Query: 120 LLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRV--------FLEKAGARCIVM 171
LL+ + D+ ++ GG+ D L ++NL + LE++G I +
Sbjct: 28 LLDASPATKDQEHIPTIVWNHGGIP-DRQLALKNLGESPLNAMLHGLKILERSGVSKIAI 86
Query: 172 PCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGF 231
PC+ +H WH ++ + + L++ E +++ +K ++G ++G+LA L+
Sbjct: 87 PCNTAHFWHSDLQQHTPIEILNMVEITVQQI----LKNYQSGD--KVGILATKGALSTQL 140
Query: 232 YQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVIL 291
YQ +L V +E +PA+ A+ R + A + + Q L+ + ++IL
Sbjct: 141 YQRELSKHNIPFVTNSDEEIEQEFMPAVYAVKRNESAKAGIVFQELSQKLIDKGAGSIIL 200
Query: 292 ASDDMQ-DLLPPDDPLLKKCIDPMDALARSTIKW 324
A ++ L +L D LA + + W
Sbjct: 201 ACTEIPIGLHAIQSLILNVSFDTTQILADACVNW 234
>gi|423655446|ref|ZP_17630745.1| aspartate racemase [Bacillus cereus VD200]
gi|401292989|gb|EJR98639.1| aspartate racemase [Bacillus cereus VD200]
Length = 226
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 77/148 (52%), Gaps = 15/148 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV + S+P LH+ + AK++ E N+K RIG+
Sbjct: 69 VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKKMVEQNIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLIPALDALNRKDVE--GARNLLRI 276
L + FY+ +L E ++P ++ T H +I LD L+R + + LL+I
Sbjct: 121 LGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVI--LDELSRGIISETSKKRLLQI 178
Query: 277 ALQVLLVRAVNTVILASDDMQDLLPPDD 304
+ L+ ++L ++ L+ +D
Sbjct: 179 T-KSLIQNGAEGILLGCTEIPLLISQND 205
>gi|254253826|ref|ZP_04947143.1| Aspartate racemase [Burkholderia dolosa AUO158]
gi|124898471|gb|EAY70314.1| Aspartate racemase [Burkholderia dolosa AUO158]
Length = 233
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 113/257 (43%), Gaps = 40/257 (15%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSG---EENDFPFL---LCSDPLLNKELLSHDRSSFSSL 136
+G++GG +T++ + ++++L+ +++ P L L P ++ + D +L
Sbjct: 4 IGVLGGMGPLATVDFMHRVIRLTRARCDQDHLPMLVANLTRMPDRSRAITDGDTDPLPAL 63
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
G+ L L ++G I +PC+ +H W+ + + P LH+ +
Sbjct: 64 L---DGIDL---------------LNRSGVDLIAIPCNTAHHWYAPLRARSAAPILHIVD 105
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
L A ++ R+ VLA L +G YQ L+ G E V+P AT + +
Sbjct: 106 TAVAAL-PAGVR--------RVAVLATGGTLASGLYQSALRARGIEPVMP-GATAQRDIA 155
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPP--DDPLLKKCIDPM 314
+ A+ V+ A L AL L+ R V+ ++ ++ D PL +D
Sbjct: 156 ACIAAVKAGRVDAAGRQLSRALATLVRRDVDVAVMGCTEIPIAAHALGDAPL--ALVDTT 213
Query: 315 DALARSTIKWVKSAEKG 331
LAR+T+ + +AE+G
Sbjct: 214 HELARATVAY--AAERG 228
>gi|406706495|ref|YP_006756848.1| aspartate racemase [alpha proteobacterium HIMB5]
gi|406652271|gb|AFS47671.1| aspartate racemase [alpha proteobacterium HIMB5]
Length = 248
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 100/229 (43%), Gaps = 33/229 (14%)
Query: 83 VGIVGGASVDSTLNLLGKL-VQLSGE-ENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
+GI+GG + L+ KL Q G+ + D+P L NK + S
Sbjct: 2 IGILGGMGTQAGLDFCNKLATQYRGKIDQDYPLFF----LYNKSNIPGRPESI------- 50
Query: 141 GGVQLDDSLIVENLRRKRVF-------------LEKAGARCIVMPCHLSHIWHDEVCKGC 187
G S EN+ KR + LEKA R IV+PC+ +H W+D++ K
Sbjct: 51 GKTTGALSNRFENISSKRKYEKVLKSLIDGCKKLEKAKCRFIVIPCNTAHYWYDDLQKKI 110
Query: 188 SVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD 247
+P ++ + KE+ K + S +IG+LA L Y +K+ + +E+ P
Sbjct: 111 GIPIIN----MPKEVFNHTKKTCKKNS--KIGLLATEGTLKTKVY-DKIFSKDYELCFPT 163
Query: 248 KATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
+ ++ A+ + +V+ A +++ +++ L+ +IL ++
Sbjct: 164 NKLQKQSVNKAIKEVKMGNVKKAAKVIQSSIKYLIKNKCKKIILGCTEL 212
>gi|293402558|ref|ZP_06646693.1| aspartate racemase [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|373453072|ref|ZP_09544970.1| aspartate racemase [Eubacterium sp. 3_1_31]
gi|291304072|gb|EFE45326.1| aspartate racemase [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|371964219|gb|EHO81749.1| aspartate racemase [Eubacterium sp. 3_1_31]
Length = 231
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 115/252 (45%), Gaps = 29/252 (11%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSH----DRSSFSSLNC 138
+GI+GG +++ L K+++ + D LN +L+H DR+S+ +
Sbjct: 5 LGIIGGVGSEASAYLYEKILRATKAPTD-------QDHLNMVILNHAEIADRTSYILDHT 57
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
+ +E+L L + G + I++PC+ SH ++DE K P H+ +
Sbjct: 58 NDNPL----PYFMEDLH----LLNQIGVKLILIPCNTSHFFYDEFQKVSHAPIYHLIDHT 109
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPA 258
+ LK+ +K R+G+LA + + + YQ+ + + E V+P++ +H +
Sbjct: 110 TERLKKEGIK--------RVGILATDGTIKSQLYQKSCESQQLEWVIPNQENQQHVMSLI 161
Query: 259 LDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALA 318
D + L+ I ++ + + V +ILA ++ +L + L ++ +DP++
Sbjct: 162 YDDIKAGKPIHKDKLISI-IKEMEEQQVERMILACTEL-SILKEREQLDERFVDPLEIAI 219
Query: 319 RSTIKWVKSAEK 330
T++ ++
Sbjct: 220 DYTLEMFHKQKR 231
>gi|421786619|ref|ZP_16223014.1| aspartate racemase [Acinetobacter baumannii Naval-82]
gi|410411961|gb|EKP63829.1| aspartate racemase [Acinetobacter baumannii Naval-82]
Length = 242
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 27/180 (15%)
Query: 82 TVGIVGGASVDST---LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG S +ST + ++VQ N L + +LN S D ++L
Sbjct: 3 TIGLLGGMSWESTALYYQQINRMVQ-----NKLGKLHSAKIILN----SVDFEEIAALQA 53
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
KG Q + + E + LEKAGA CI++ + H ++ +VPF+H+++
Sbjct: 54 KGLW-QEAGAYLAEQAQN----LEKAGADCILVCTNTMHKVAPQIEDAITVPFIHIADAT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME--HTLI 256
AKE+ N++ ++ +L + FY+ +LQ G EV++P+ A + H++I
Sbjct: 109 AKEILSQNIR--------KVALLGTAFTMEQDFYKARLQDRGIEVIIPNDANRKIVHSII 160
>gi|30020750|ref|NP_832381.1| aspartate racemase [Bacillus cereus ATCC 14579]
gi|229130822|ref|ZP_04259771.1| Aspartate racemase [Bacillus cereus BDRD-Cer4]
gi|29896302|gb|AAP09582.1| Aspartate racemase [Bacillus cereus ATCC 14579]
gi|228652627|gb|EEL08516.1| Aspartate racemase [Bacillus cereus BDRD-Cer4]
Length = 226
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 12/106 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV + S+P LH+ + AK++ E N+K RIG+
Sbjct: 69 VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKKMVEQNIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLIPALDALNR 264
L + FY+ +L E ++P ++ T H +I LD L+R
Sbjct: 121 LGTKQTMEQDFYKSRLAKYNIETIIPNDEERTFIHHVI--LDELSR 164
>gi|312796799|ref|YP_004029721.1| aspartate racemase [Burkholderia rhizoxinica HKI 454]
gi|312168574|emb|CBW75577.1| Aspartate racemase (EC 5.1.1.13) [Burkholderia rhizoxinica HKI 454]
Length = 253
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 106/250 (42%), Gaps = 28/250 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLN 137
+ +GI+GG ++T L L Q +G + D PFLL S P + DRS+
Sbjct: 10 DRLGILGGMGSEATAYFLRLLAQRAGAQVDQDHVPFLLLSCPEIP------DRST----- 58
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
++ D+++ + + L +AG + + C+ +H W DE +PF+ +
Sbjct: 59 ----AIENGDTIVPTMIHARLAQLARAGCGAVAIACNTAHYWCDEFAAALRIPFIDMISA 114
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIP 257
A++ + AGS + VL + + Y L G ++ PD +E T
Sbjct: 115 TARQTALSG-----AGSAI---VLGTRSTIRYRLYDHALNDAGVHLIEPDDEIVELT-SA 165
Query: 258 ALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDAL 317
A+ D+ GA L +L + VIL ++ ++P + ID + L
Sbjct: 166 AISLSKAGDLPGASAQLARSLAACGALHADAVILGCTELPMVVPAGIRGI-HLIDSVSCL 224
Query: 318 ARSTIKWVKS 327
A + ++W ++
Sbjct: 225 AEACVQWWRA 234
>gi|452947440|gb|EME52928.1| aspartate racemase [Amycolatopsis decaplanina DSM 44594]
Length = 277
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 106/243 (43%), Gaps = 27/243 (11%)
Query: 83 VGIVGGASVDSTLNLLGKLVQ---LSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
VG++GG +T + +LV+ + +++ LL DP + DRS
Sbjct: 27 VGVLGGMGPAATADFYTRLVRETPATTDQDHLRVLLWCDPTVP------DRSR----ALL 76
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
GG L LR RV L AG+ I +PC+ +H + V + VP +H++E
Sbjct: 77 EGGTDPTPWL----LRGARV-LAAAGSDVIAVPCNTAHAFLPAVAEEAGVPLVHMTERTG 131
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
+ L A P S R+G+LA L Y L G V+ PD + ++ A+
Sbjct: 132 RYL--ARHHP----SVRRVGLLATTGTLRTKLYDGWLTDAGISVLEPDPVSQADEVMAAI 185
Query: 260 DALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALAR 319
++ K E + LLR A + L+ R VI ++ L D LL IDP+ L R
Sbjct: 186 RSI--KAGETSSQLLRTAARRLVGRGAQAVIAGCSEVPLGLDSRD-LLVPLIDPVQVLVR 242
Query: 320 STI 322
+ +
Sbjct: 243 TLV 245
>gi|240103398|ref|YP_002959707.1| aspartate racemase [Thermococcus gammatolerans EJ3]
gi|239910952|gb|ACS33843.1| Aspartate racemase (racD) [Thermococcus gammatolerans EJ3]
Length = 234
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 107/246 (43%), Gaps = 28/246 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLS--GEENDFP-FLLCSDPLLNKELLSHDRSSFSSLN 137
T+GI+GG +T L ++V+ + + D P ++ ++P + DR++F
Sbjct: 3 RTIGILGGMGPLATAELFRRIVEKTPAKRDQDHPRIIIYNNPKIP------DRTAF---- 52
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
G G LI + LE GA I+MPC+ +H + D + + +P + + E
Sbjct: 53 ILGRGPDPRPELIDSAKK-----LESWGADFIIMPCNTAHFFADTIQRAIRIPLVSMIEE 107
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIP 257
A+ +K ++ + G+LA + + Y L G + +P K +
Sbjct: 108 TAERVKGMGLR--------KAGLLATDGTIKGLIYHRALLKRGVSIAVPGKKDQRLVMKA 159
Query: 258 ALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDAL 317
+ + ++E R LL + + L R + +I ++ L P+D L IDP+D +
Sbjct: 160 IYEGIKAGNLELGRELL-LKVAGKLQRRSDVIIAGCTEVSVALKPED-LSVPLIDPLDVI 217
Query: 318 ARSTIK 323
A +K
Sbjct: 218 AEKAVK 223
>gi|118478023|ref|YP_895174.1| aspartate racemase [Bacillus thuringiensis str. Al Hakam]
gi|196043544|ref|ZP_03110782.1| aspartate racemase family protein [Bacillus cereus 03BB108]
gi|225864623|ref|YP_002750001.1| aspartate racemase family protein [Bacillus cereus 03BB102]
gi|229184870|ref|ZP_04312061.1| Aspartate racemase [Bacillus cereus BGSC 6E1]
gi|118417248|gb|ABK85667.1| aspartate racemase [Bacillus thuringiensis str. Al Hakam]
gi|196025853|gb|EDX64522.1| aspartate racemase family protein [Bacillus cereus 03BB108]
gi|225785651|gb|ACO25868.1| aspartate racemase family protein [Bacillus cereus 03BB102]
gi|228598523|gb|EEK56152.1| Aspartate racemase [Bacillus cereus BGSC 6E1]
Length = 226
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV S+P LH+ + AKE+ + N+K RIG+
Sbjct: 69 VEKSGADCLLMCSNTVHLFAEEVESAISIPLLHIGDVSAKEMVDQNIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDK 248
L + FY+ +L H E ++P++
Sbjct: 121 LGTKQTMEQDFYKSRLAHYNIETIIPNE 148
>gi|260554538|ref|ZP_05826759.1| aspartate racemase [Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|260411080|gb|EEX04377.1| aspartate racemase [Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|452955934|gb|EME61328.1| aspartate racemase [Acinetobacter baumannii MSP4-16]
Length = 242
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 27/180 (15%)
Query: 82 TVGIVGGASVDST---LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG S +ST + ++VQ N L + +LN S D ++L
Sbjct: 3 TIGLLGGMSWESTALYYQQINRMVQ-----NKLGKLHSAKIILN----SVDFEEIAALQA 53
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
KG Q + + E + LEKAGA CI++ + H ++ +VPF+H+++
Sbjct: 54 KGLW-QEAGAYLAEQAQN----LEKAGADCILVCTNTMHKVAPQIEDAITVPFIHIADAT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME--HTLI 256
AKE+ N++ ++ +L + FY+ +LQ G EV++P+ A + H++I
Sbjct: 109 AKEILSQNIR--------KVALLGTAFTMEQDFYKARLQDRGIEVIIPNDANRKIVHSII 160
>gi|423384167|ref|ZP_17361423.1| aspartate racemase [Bacillus cereus BAG1X1-2]
gi|423529455|ref|ZP_17505900.1| aspartate racemase [Bacillus cereus HuB1-1]
gi|401640776|gb|EJS58504.1| aspartate racemase [Bacillus cereus BAG1X1-2]
gi|402448884|gb|EJV80723.1| aspartate racemase [Bacillus cereus HuB1-1]
Length = 226
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 12/106 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV + S+P LH+ + AKE+ E N+K RIG+
Sbjct: 69 VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKA--TMEHTLIPALDALNR 264
L + FY+ +L + ++P++ T H +I LD L+R
Sbjct: 121 LGTKQTMEQDFYKSRLAKYNIKTIIPNEEERTFIHHVI--LDELSR 164
>gi|210635501|ref|ZP_03298582.1| hypothetical protein COLSTE_02521 [Collinsella stercoris DSM 13279]
gi|210158356|gb|EEA89327.1| aspartate racemase [Collinsella stercoris DSM 13279]
Length = 238
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 25/180 (13%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNC 138
+G++GG +T + +++ + E D P ++ +DP + DR++F
Sbjct: 5 VLGVLGGVGPLATAYFMELVIKKTPAERDQDNIPMIVFNDPQIP------DRTAFILDRT 58
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
+ D L + R ++LE AGA I +PC+ +H +++++ VP L++
Sbjct: 59 QP------DPL--PEMERVVLWLEDAGADYIAIPCNTAHFFYEQINAVAHVPVLNI---- 106
Query: 199 AKELKEANMKPLEA-GSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIP 257
++E + +EA G IG+LA + LT+G +Q L G VV P T++P
Sbjct: 107 ---MRETTSRIVEAYGEHATIGLLATDGTLTSGVFQNYLSEAGLSVVAPSDEDQAKTVMP 163
>gi|385208935|ref|ZP_10035803.1| aspartate racemase [Burkholderia sp. Ch1-1]
gi|385181273|gb|EIF30549.1| aspartate racemase [Burkholderia sp. Ch1-1]
Length = 232
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 113/255 (44%), Gaps = 40/255 (15%)
Query: 81 NTVGIVGGASVDST------LNLLGKLVQLSGEENDFPFLLCSD--PLLNKELLSHDRSS 132
T+G++GG S +S+ LN K +L G N +L D P+ E L
Sbjct: 2 KTIGVIGGMSWESSTEYYKLLNRHAK-ARLGGHHNARSLMLSVDFAPI---EALQRA-GD 56
Query: 133 FSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFL 192
+S+L G Q+ D+ RR LE+ GA +++ + H ++ + VPFL
Sbjct: 57 WSAL-----GQQMADAA-----RR----LEQGGADLVMLATNTMHRVYESIEAAIDVPFL 102
Query: 193 HVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE--GFEVVLPDKAT 250
H+++ L+ A ++ R+G+L + FY +L HE G E ++PD+A
Sbjct: 103 HIADPTGSALRAAGIE--------RVGLLGTRYTMEQTFYTGRL-HERYGLETLVPDQAE 153
Query: 251 MEHTLIPALDALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKK 309
D L V + +R + + ++ L R VIL ++ L+ P+D ++
Sbjct: 154 RADVHRIIYDELCHGKVNDASRAVYQRVIEALAARGAQAVILGCTEITLLIKPEDSVV-P 212
Query: 310 CIDPMDALARSTIKW 324
D A++ ++W
Sbjct: 213 VFDTTALHAQAAVEW 227
>gi|417552976|ref|ZP_12204046.1| aspartate racemase [Acinetobacter baumannii Naval-81]
gi|417562697|ref|ZP_12213576.1| aspartate racemase [Acinetobacter baumannii OIFC137]
gi|421198122|ref|ZP_15655289.1| aspartate racemase [Acinetobacter baumannii OIFC109]
gi|421457205|ref|ZP_15906542.1| aspartate racemase [Acinetobacter baumannii IS-123]
gi|421633504|ref|ZP_16074133.1| aspartate racemase [Acinetobacter baumannii Naval-13]
gi|421804529|ref|ZP_16240439.1| aspartate racemase [Acinetobacter baumannii WC-A-694]
gi|395525279|gb|EJG13368.1| aspartate racemase [Acinetobacter baumannii OIFC137]
gi|395566090|gb|EJG27735.1| aspartate racemase [Acinetobacter baumannii OIFC109]
gi|400206929|gb|EJO37900.1| aspartate racemase [Acinetobacter baumannii IS-123]
gi|400393235|gb|EJP60281.1| aspartate racemase [Acinetobacter baumannii Naval-81]
gi|408706034|gb|EKL51358.1| aspartate racemase [Acinetobacter baumannii Naval-13]
gi|410411900|gb|EKP63769.1| aspartate racemase [Acinetobacter baumannii WC-A-694]
Length = 242
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 27/180 (15%)
Query: 82 TVGIVGGASVDST---LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG S +ST + ++VQ N L + +LN S D ++L
Sbjct: 3 TIGLLGGMSWESTALYYQQINRMVQ-----NKLGKLHSAKIILN----SVDFEEIAALQA 53
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
KG Q + + E + LEKAGA CI++ + H ++ +VPF+H+++
Sbjct: 54 KGLW-QEAGAYLAEQAQN----LEKAGADCILVCTNTMHKVAPQIEDAITVPFIHIADAT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME--HTLI 256
AKE+ N++ ++ +L + FY+ +LQ G EV++P+ A + H++I
Sbjct: 109 AKEILSQNIR--------KVALLGTAFTMEQDFYKARLQDRGIEVIIPNDANRKIVHSII 160
>gi|229116159|ref|ZP_04245550.1| Aspartate racemase [Bacillus cereus Rock1-3]
gi|407705078|ref|YP_006828663.1| hypothetical protein MC28_1842 [Bacillus thuringiensis MC28]
gi|423379543|ref|ZP_17356827.1| aspartate racemase [Bacillus cereus BAG1O-2]
gi|423447198|ref|ZP_17424077.1| aspartate racemase [Bacillus cereus BAG5O-1]
gi|423545955|ref|ZP_17522313.1| aspartate racemase [Bacillus cereus HuB5-5]
gi|228667276|gb|EEL22727.1| Aspartate racemase [Bacillus cereus Rock1-3]
gi|401131194|gb|EJQ38848.1| aspartate racemase [Bacillus cereus BAG5O-1]
gi|401181768|gb|EJQ88915.1| aspartate racemase [Bacillus cereus HuB5-5]
gi|401633191|gb|EJS50973.1| aspartate racemase [Bacillus cereus BAG1O-2]
gi|407382763|gb|AFU13264.1| Aspartate racemase [Bacillus thuringiensis MC28]
Length = 227
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 74/147 (50%), Gaps = 13/147 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV + S+P LH+ + AKE+ E N+K RIG+
Sbjct: 70 VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMVEQNIK--------RIGL 121
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLIPALDALNRKDV-EGARNLLRIA 277
L + FY +L E ++P ++ T H +I L+ L+R + E +R L
Sbjct: 122 LGTKQTMEQDFYTSRLAKYNIETIIPNDEERTFIHHVI--LNELSRGIISETSREKLIQI 179
Query: 278 LQVLLVRAVNTVILASDDMQDLLPPDD 304
L+ ++L ++ L+ +D
Sbjct: 180 TNSLIQNGAEGILLGCTEIPLLISQND 206
>gi|389852507|ref|YP_006354741.1| aspartate racemase [Pyrococcus sp. ST04]
gi|388249813|gb|AFK22666.1| aspartate racemase [Pyrococcus sp. ST04]
Length = 228
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 116/248 (46%), Gaps = 35/248 (14%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLS--GEENDFP-FLLCSDPLLNKELLSHDRSSFSSLNCK 139
+GI+GG +T+ L ++V+ + + D P ++ ++P + DR++F + K
Sbjct: 4 IGILGGMGPLATVELFKRIVEKTPAKRDQDHPKIVIYNNPQIP------DRTAF--ILGK 55
Query: 140 GGGVQLDDSLIVENLRRKRVF----LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195
G E+ R ++ LE+ G I+MPC+ +H + +++ + VP + +
Sbjct: 56 G-----------EDPRPYLIWTAKELEECGVDFIIMPCNTAHAFIEDIQREIKVPIISMV 104
Query: 196 ECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTL 255
E AK+L+E + G+LA + +G Y + L+ G +++P + E +
Sbjct: 105 EETAKKLREIGCN--------KAGLLATTGTIVSGVYHKALKKFGISLLIPSEKEQEIVM 156
Query: 256 IPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMD 315
D + ++E R LL + L R + +I ++ +L P+D L IDPMD
Sbjct: 157 KGIYDGVKAGNLELGRELLLGIAKTLEKRGADCIIAGCTEVSVVLKPED-LDVPLIDPMD 215
Query: 316 ALARSTIK 323
+A +K
Sbjct: 216 VIAEVAVK 223
>gi|147828322|emb|CAN62184.1| hypothetical protein VITISV_014122 [Vitis vinifera]
Length = 236
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 31/37 (83%)
Query: 296 MQDLLPPDDPLLKKCIDPMDALARSTIKWVKSAEKGT 332
M+DLLP DDPLL+KCID MDALARSTI W +S E+ T
Sbjct: 1 MRDLLPRDDPLLRKCIDLMDALARSTINWARSVEQVT 37
>gi|365839650|ref|ZP_09380883.1| aspartate racemase [Anaeroglobus geminatus F0357]
gi|364564071|gb|EHM41847.1| aspartate racemase [Anaeroglobus geminatus F0357]
Length = 230
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Query: 152 ENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLE 211
E L + LE+AGA IV+ + H E+ + +VP LH+++ A ELK++N+K
Sbjct: 62 EVLAQAASALERAGADFIVICTNTMHKVAPEISRKITVPLLHIADMTAIELKKSNIK--- 118
Query: 212 AGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
++G+L + FY+ LQ G EV++PD A +E
Sbjct: 119 -----KVGLLGTKYTMQQAFYKNVLQANGIEVIVPDDAGIE 154
>gi|228927696|ref|ZP_04090745.1| Aspartate racemase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|229125032|ref|ZP_04254197.1| Aspartate racemase [Bacillus cereus 95/8201]
gi|228658408|gb|EEL14083.1| Aspartate racemase [Bacillus cereus 95/8201]
gi|228831946|gb|EEM77534.1| Aspartate racemase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
Length = 226
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 11/102 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV S+P LH+ + AKE+ E N+K RIG+
Sbjct: 69 VEKSGADCLLMCSNTVHLFAEEVESAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEHTLIPAL 259
L + FY+ +L + E ++P D+ + H ++ L
Sbjct: 121 LGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVILNEL 162
>gi|445440566|ref|ZP_21441821.1| aspartate racemase [Acinetobacter baumannii WC-A-92]
gi|444765861|gb|ELW90144.1| aspartate racemase [Acinetobacter baumannii WC-A-92]
Length = 242
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 27/180 (15%)
Query: 82 TVGIVGGASVDST---LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG S +ST + ++VQ N L + +LN S D ++L
Sbjct: 3 TIGLLGGMSWESTSLYYQQINRMVQ-----NKLGKLHSAKIILN----SVDFEEIAALQA 53
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
KG Q + + E + LEKAGA CI++ + H ++ +VPF+H+++
Sbjct: 54 KGLW-QEAGAYLAEQAQN----LEKAGADCILVCTNTMHKVAPQIEDAITVPFIHIADAT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME--HTLI 256
AKE+ N++ ++ +L + FY+ +LQ G EV++P+ A + H++I
Sbjct: 109 AKEILSQNIR--------KVALLGTAFTMEQDFYKARLQDRGIEVIIPNDANRKIVHSII 160
>gi|170703014|ref|ZP_02893844.1| aspartate racemase [Burkholderia ambifaria IOP40-10]
gi|170132072|gb|EDT00570.1| aspartate racemase [Burkholderia ambifaria IOP40-10]
Length = 233
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 112/251 (44%), Gaps = 28/251 (11%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
VG++GG +T++ + +++ L+ D L P++ L S + ++ GG
Sbjct: 4 VGVLGGMGPLATVDFMHRVICLTRARCDQEHL----PMIVANLTQTPDRSRAIID---GG 56
Query: 143 VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKEL 202
+L+ L + G I +PC+ +H W+ + + + P LH+ +
Sbjct: 57 TDPLPALL-----DGVALLNRCGVDVIAIPCNSAHHWYAPLRERSAAPVLHIVD------ 105
Query: 203 KEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDAL 262
A++ + AG R+ VLA L +GFYQ L+ GFE V+P A + + + A+
Sbjct: 106 --ASVAAVPAGV-RRVAVLATGGTLVSGFYQAALRARGFEPVMPAVAA-QRDIAACIAAV 161
Query: 263 NRKDVEGARNLLRIALQVLLVRAVNTVILASDD--MQDLLPPDDPLLKKCIDPMDALARS 320
++ + L AL L R V ++ + + + D P ID LAR+
Sbjct: 162 KAGKIDASVRRLSRALATLARRDVGVAVMGCTEIPLAARVLRDAPF--ALIDSTQELARA 219
Query: 321 TIKWVKSAEKG 331
T+ + +AE+G
Sbjct: 220 TVAY--AAERG 228
>gi|423614383|ref|ZP_17590241.1| aspartate racemase [Bacillus cereus VD107]
gi|401238698|gb|EJR45133.1| aspartate racemase [Bacillus cereus VD107]
Length = 227
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 80/176 (45%), Gaps = 35/176 (19%)
Query: 80 ANTVGIVGGASVDSTLNLLGKLV---QLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSL 136
+ T+GI+GG +TL+L K++ + E+ ++ ++P ++ + S+
Sbjct: 2 SKTIGILGGMGPAATLDLFHKIILNTPVQTEQEHHRIIIYNNP----KIPPRTQHSYP-- 55
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+ L + + LEKAGA I+MPC+ +HIW +++ +PF + E
Sbjct: 56 --------------LPELIKSAILLEKAGADFIIMPCNTAHIWLEQIKATIQIPFYSIIE 101
Query: 197 CVAK----ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDK 248
+ E K++ K +I +LA + G YQ+ + +E++ P K
Sbjct: 102 TTVESIFLEEKDSTNK--------KILLLATETTINDGLYQKAFHNTPYEIITPIK 149
>gi|228952962|ref|ZP_04115024.1| Aspartate racemase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|229070097|ref|ZP_04203364.1| Aspartate racemase [Bacillus cereus F65185]
gi|229079818|ref|ZP_04212350.1| Aspartate racemase [Bacillus cereus Rock4-2]
gi|365161022|ref|ZP_09357176.1| aspartate racemase [Bacillus sp. 7_6_55CFAA_CT2]
gi|423424758|ref|ZP_17401789.1| aspartate racemase [Bacillus cereus BAG3X2-2]
gi|423504205|ref|ZP_17480797.1| aspartate racemase [Bacillus cereus HD73]
gi|449090027|ref|YP_007422468.1| Aspartate racemase [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|228703402|gb|EEL55856.1| Aspartate racemase [Bacillus cereus Rock4-2]
gi|228713011|gb|EEL64919.1| Aspartate racemase [Bacillus cereus F65185]
gi|228806683|gb|EEM53240.1| Aspartate racemase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|363621850|gb|EHL73035.1| aspartate racemase [Bacillus sp. 7_6_55CFAA_CT2]
gi|401113530|gb|EJQ21399.1| aspartate racemase [Bacillus cereus BAG3X2-2]
gi|402457346|gb|EJV89114.1| aspartate racemase [Bacillus cereus HD73]
gi|449023784|gb|AGE78947.1| Aspartate racemase [Bacillus thuringiensis serovar kurstaki str.
HD73]
Length = 226
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 12/106 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV + S+P LH+ + AKE+ E ++K RIG+
Sbjct: 69 VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMVEQSIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKA--TMEHTLIPALDALNR 264
L + FY+ +L E ++P++ T H +I LD L+R
Sbjct: 121 LGTKQTMEQDFYKSRLAKYNIETIIPNEEERTFIHHVI--LDELSR 164
>gi|196032514|ref|ZP_03099928.1| aspartate racemase family protein [Bacillus cereus W]
gi|195995265|gb|EDX59219.1| aspartate racemase family protein [Bacillus cereus W]
Length = 226
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 11/102 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV S+P LH+ + AKE+ E N+K RIG+
Sbjct: 69 VEKSGADCLLMCSNTVHLFAEEVESAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEHTLIPAL 259
L + FY+ +L + E ++P D+ + H ++ L
Sbjct: 121 LGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVILNEL 162
>gi|417549222|ref|ZP_12200302.1| aspartate racemase [Acinetobacter baumannii Naval-18]
gi|417567292|ref|ZP_12218164.1| aspartate racemase [Acinetobacter baumannii OIFC143]
gi|395552964|gb|EJG18972.1| aspartate racemase [Acinetobacter baumannii OIFC143]
gi|400387190|gb|EJP50263.1| aspartate racemase [Acinetobacter baumannii Naval-18]
Length = 242
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 27/180 (15%)
Query: 82 TVGIVGGASVDST---LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG S +ST + ++VQ N L + +LN S D ++L
Sbjct: 3 TIGLLGGMSWESTALYYQQINRMVQ-----NKLGKLHSAKIILN----SVDFEEIAALQS 53
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
KG Q + + E + LEKAGA CI++ + H ++ +VPF+H+++
Sbjct: 54 KGLW-QEAGAYLAEQAKN----LEKAGADCILVCTNTMHKVAPQIEDAITVPFIHIADAT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME--HTLI 256
AKE+ N++ ++ +L + FY+ +LQ G EV++P+ A + H++I
Sbjct: 109 AKEILSQNIR--------KVALLGTAFTMEQDFYKARLQDRGIEVIIPNDANRKIVHSII 160
>gi|218903772|ref|YP_002451606.1| aspartate racemase family protein [Bacillus cereus AH820]
gi|218538671|gb|ACK91069.1| aspartate racemase family protein [Bacillus cereus AH820]
Length = 226
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 11/102 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV S+P LH+ + AKE+ E N+K RIG+
Sbjct: 69 VEKSGADCLLMCSNTVHLFAEEVESAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEHTLIPAL 259
L + FY+ +L + E ++P D+ + H ++ L
Sbjct: 121 LGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVILNEL 162
>gi|196040325|ref|ZP_03107626.1| aspartate racemase family protein [Bacillus cereus NVH0597-99]
gi|196028810|gb|EDX67416.1| aspartate racemase family protein [Bacillus cereus NVH0597-99]
Length = 226
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 11/102 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV S+P LH+ + AKE+ E N+K RIG+
Sbjct: 69 VEKSGADCLLMCSNTVHLFAEEVESAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEHTLIPAL 259
L + FY+ +L + E ++P D+ + H ++ L
Sbjct: 121 LGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVILNEL 162
>gi|30262624|ref|NP_845001.1| aspartate racemase [Bacillus anthracis str. Ames]
gi|47527931|ref|YP_019280.1| aspartate racemase [Bacillus anthracis str. 'Ames Ancestor']
gi|49185467|ref|YP_028719.1| aspartate racemase [Bacillus anthracis str. Sterne]
gi|65319945|ref|ZP_00392904.1| COG1794: Aspartate racemase [Bacillus anthracis str. A2012]
gi|165868472|ref|ZP_02213132.1| aspartate racemase family protein [Bacillus anthracis str. A0488]
gi|167632270|ref|ZP_02390597.1| aspartate racemase family protein [Bacillus anthracis str. A0442]
gi|167637551|ref|ZP_02395830.1| aspartate racemase family protein [Bacillus anthracis str. A0193]
gi|170685313|ref|ZP_02876537.1| aspartate racemase family protein [Bacillus anthracis str. A0465]
gi|170704650|ref|ZP_02895116.1| aspartate racemase family protein [Bacillus anthracis str. A0389]
gi|177649807|ref|ZP_02932809.1| aspartate racemase family protein [Bacillus anthracis str. A0174]
gi|190565232|ref|ZP_03018152.1| aspartate racemase family protein [Bacillus anthracis str.
Tsiankovskii-I]
gi|227814544|ref|YP_002814553.1| aspartate racemase family protein [Bacillus anthracis str. CDC 684]
gi|228915256|ref|ZP_04078850.1| Aspartate racemase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228933925|ref|ZP_04096768.1| Aspartate racemase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|229601854|ref|YP_002866941.1| aspartate racemase family protein [Bacillus anthracis str. A0248]
gi|254685210|ref|ZP_05149070.1| aspartate racemase family protein [Bacillus anthracis str.
CNEVA-9066]
gi|254722617|ref|ZP_05184405.1| aspartate racemase family protein [Bacillus anthracis str. A1055]
gi|254737661|ref|ZP_05195364.1| aspartate racemase family protein [Bacillus anthracis str. Western
North America USA6153]
gi|254743159|ref|ZP_05200844.1| aspartate racemase family protein [Bacillus anthracis str. Kruger
B]
gi|254751976|ref|ZP_05204013.1| aspartate racemase family protein [Bacillus anthracis str. Vollum]
gi|254760497|ref|ZP_05212521.1| aspartate racemase family protein [Bacillus anthracis str.
Australia 94]
gi|301054176|ref|YP_003792387.1| aspartate racemase [Bacillus cereus biovar anthracis str. CI]
gi|386736387|ref|YP_006209568.1| Aspartate racemase [Bacillus anthracis str. H9401]
gi|421510973|ref|ZP_15957855.1| aspartate racemase [Bacillus anthracis str. UR-1]
gi|421636435|ref|ZP_16077034.1| aspartate racemase [Bacillus anthracis str. BF1]
gi|423551604|ref|ZP_17527931.1| aspartate racemase [Bacillus cereus ISP3191]
gi|30257256|gb|AAP26487.1| aspartate racemase family protein [Bacillus anthracis str. Ames]
gi|47503079|gb|AAT31755.1| aspartate racemase family protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49179394|gb|AAT54770.1| aspartate racemase family protein [Bacillus anthracis str. Sterne]
gi|164715198|gb|EDR20715.1| aspartate racemase family protein [Bacillus anthracis str. A0488]
gi|167514100|gb|EDR89467.1| aspartate racemase family protein [Bacillus anthracis str. A0193]
gi|167532568|gb|EDR95204.1| aspartate racemase family protein [Bacillus anthracis str. A0442]
gi|170130451|gb|EDS99312.1| aspartate racemase family protein [Bacillus anthracis str. A0389]
gi|170670673|gb|EDT21412.1| aspartate racemase family protein [Bacillus anthracis str. A0465]
gi|172084881|gb|EDT69939.1| aspartate racemase family protein [Bacillus anthracis str. A0174]
gi|190563259|gb|EDV17224.1| aspartate racemase family protein [Bacillus anthracis str.
Tsiankovskii-I]
gi|227005097|gb|ACP14840.1| aspartate racemase family protein [Bacillus anthracis str. CDC 684]
gi|228825621|gb|EEM71411.1| Aspartate racemase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228844373|gb|EEM89430.1| Aspartate racemase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|229266262|gb|ACQ47899.1| aspartate racemase family protein [Bacillus anthracis str. A0248]
gi|300376345|gb|ADK05249.1| aspartate racemase [Bacillus cereus biovar anthracis str. CI]
gi|384386239|gb|AFH83900.1| Aspartate racemase [Bacillus anthracis str. H9401]
gi|401187442|gb|EJQ94515.1| aspartate racemase [Bacillus cereus ISP3191]
gi|401818977|gb|EJT18165.1| aspartate racemase [Bacillus anthracis str. UR-1]
gi|403396963|gb|EJY94200.1| aspartate racemase [Bacillus anthracis str. BF1]
Length = 226
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 11/102 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV S+P LH+ + AKE+ E N+K RIG+
Sbjct: 69 VEKSGADCLLMCSNTVHLFAEEVESAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEHTLIPAL 259
L + FY+ +L + E ++P D+ + H ++ L
Sbjct: 121 LGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVILNEL 162
>gi|423436133|ref|ZP_17413114.1| aspartate racemase [Bacillus cereus BAG4X12-1]
gi|401122747|gb|EJQ30531.1| aspartate racemase [Bacillus cereus BAG4X12-1]
Length = 226
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 12/106 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV + S+P LH+ + AKE+ E ++K RIG+
Sbjct: 69 VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEIVEQSIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKA--TMEHTLIPALDALNR 264
L + FY+ +L E ++P++ T H +I LD L+R
Sbjct: 121 LGTKQTMEQDFYKSRLAKYNIETIIPNEEERTFIHHVI--LDELSR 164
>gi|421664325|ref|ZP_16104465.1| aspartate racemase [Acinetobacter baumannii OIFC110]
gi|408712622|gb|EKL57805.1| aspartate racemase [Acinetobacter baumannii OIFC110]
Length = 242
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 27/180 (15%)
Query: 82 TVGIVGGASVDST---LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG S +ST + ++VQ N L + +LN S D ++L
Sbjct: 3 TIGLLGGMSWESTALYYQQINRMVQ-----NKLGKLHSAKIILN----SVDFEEIAALQS 53
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
KG Q + + E + LEKAGA CI++ + H ++ +VPF+H+++
Sbjct: 54 KGLW-QEAGAYLAEQAQN----LEKAGADCILVCTNTMHKVAPQIEDAITVPFIHIADAT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME--HTLI 256
AKE+ N++ ++ +L + FY+ +LQ G EV++P+ A + H++I
Sbjct: 109 AKEILSQNIR--------KVALLGTAFTMEQDFYKARLQDRGIEVIIPNDANRKIVHSII 160
>gi|209520721|ref|ZP_03269470.1| aspartate racemase [Burkholderia sp. H160]
gi|209498846|gb|EDZ98952.1| aspartate racemase [Burkholderia sp. H160]
Length = 232
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 110/259 (42%), Gaps = 38/259 (14%)
Query: 81 NTVGIVGGASVDST------LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFS 134
T+G++GG S +S+ LN K +L G N LL D F+
Sbjct: 2 KTIGVIGGMSWESSTEYYRLLNRHAK-ARLGGHHNARSLLLTVD--------------FA 46
Query: 135 SL--NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFL 192
S+ N + G D + E + LE+ GA +++ + H + + + +VPFL
Sbjct: 47 SIEANQRAG----DWHALGEQMADAARQLERGGADLVILATNTMHRVCESIEQAITVPFL 102
Query: 193 HVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATM 251
H+++ L+ A ++ R+G+L + FY +L+ G + ++PD
Sbjct: 103 HIADPTGAALRAAGVE--------RVGLLGTRYTMEQTFYTGRLRERYGLDTLVPDDDER 154
Query: 252 EHTLIPALDALNRKDVEGA-RNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKC 310
D L +V+ A R + + ++ L R VIL ++ L+ P+D +L
Sbjct: 155 ADVHRIIYDELCHGNVDDASRKVYQRVIEHLAARGAQAVILGCTEITLLIKPEDSVL-PV 213
Query: 311 IDPMDALARSTIKWVKSAE 329
D A++ ++W AE
Sbjct: 214 FDTTALHAQAAVEWAIGAE 232
>gi|228946256|ref|ZP_04108585.1| Aspartate racemase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228813420|gb|EEM59712.1| Aspartate racemase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
Length = 226
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 11/102 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV S+P LH+ + AKE+ E N+K RIG+
Sbjct: 69 VEKSGADCLLMCSNTVHLFAEEVESAISIPLLHIGDISAKEMVEQNIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEHTLIPAL 259
L + FY+ +L + E ++P D+ + H ++ L
Sbjct: 121 LGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVILNEL 162
>gi|443630840|ref|ZP_21115021.1| amino acid racemase [Bacillus subtilis subsp. inaquosorum KCTC
13429]
gi|443348645|gb|ELS62701.1| amino acid racemase [Bacillus subtilis subsp. inaquosorum KCTC
13429]
Length = 227
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 108/253 (42%), Gaps = 48/253 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + K++ +L G ND +P ++ C P + HD
Sbjct: 2 IGILAGMGPKSTSPFIDKVIDYCQKLYGAANDIDYPHMMIYSCPTPFYADRPVDHDEMKR 61
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
+ +N G V+L EK G I +PC+ +H++++E+ + SVP LH
Sbjct: 62 AIIN---GAVKL----------------EKTGVDFIALPCNTAHVYYEEIQQALSVPLLH 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME- 252
+ E KE+ K + VL + + YQ+ L+ G EVV D
Sbjct: 103 IIEETIKEIPHPAKKAV---------VLGTEPTIQSAIYQKGLEANGQEVVHKDHWQQAV 153
Query: 253 HTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQ---DLLPPDDPLLKK 309
+ LI + N ++ + L + L + + + +I A D+ D + + P+
Sbjct: 154 NQLIAGIKQPNH--IQHTQALWQ-KLYEEISQHADLIISACTDLNAVLDHIQSEIPI--- 207
Query: 310 CIDPMDALARSTI 322
ID D LA+ST+
Sbjct: 208 -IDSADCLAKSTV 219
>gi|422348224|ref|ZP_16429117.1| aspartate racemase [Sutterella wadsworthensis 2_1_59BFAA]
gi|404659477|gb|EKB32324.1| aspartate racemase [Sutterella wadsworthensis 2_1_59BFAA]
Length = 461
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 119/263 (45%), Gaps = 37/263 (14%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNC- 138
VG++GG +T++L K+V+ + +ND F ++ +P ++ DR++ C
Sbjct: 218 VGLIGGLGPAATVDLYDKIVKATPAKNDQEHFKLVVEQNPQIS------DRTA-----CL 266
Query: 139 -KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
KGG D +L + R+ L+K G I++PC+ +H + + + +PF+++
Sbjct: 267 LKGGA---DPTLAMYGCARR---LQKDGCDAIIVPCNTAHAFVPYLERHLDIPFINMQIA 320
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIP 257
+E+K + G RIG+LA + + G Y +K + + +PD+ E +
Sbjct: 321 TMEEIKA------KLGDKARIGLLATSGTVQTGIYGDKAKALNLPMFVPDELHQERVMAA 374
Query: 258 ALDALNRK----DVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLL----KK 309
L K D + +L+ A ++ N +IL ++ +L D + +
Sbjct: 375 IYGPLGAKAGYTDGQCREDLVSAAEYLVKTYDCNCLILGCTELPLILDECDDFVCAGKEV 434
Query: 310 C-IDPMDALARSTIKWVKSAEKG 331
C +DP ALAR ++ K
Sbjct: 435 CVVDPTSALARKVVRIATETNKA 457
>gi|169795477|ref|YP_001713270.1| aspartate/glutamate racemase [Acinetobacter baumannii AYE]
gi|213158584|ref|YP_002319882.1| aspartate racemase [Acinetobacter baumannii AB0057]
gi|215482962|ref|YP_002325167.1| aspartate racemase [Acinetobacter baumannii AB307-0294]
gi|301345799|ref|ZP_07226540.1| aspartate racemase [Acinetobacter baumannii AB056]
gi|301513552|ref|ZP_07238789.1| aspartate racemase [Acinetobacter baumannii AB058]
gi|301597162|ref|ZP_07242170.1| aspartate racemase [Acinetobacter baumannii AB059]
gi|332855204|ref|ZP_08435755.1| aspartate racemase [Acinetobacter baumannii 6013150]
gi|332872017|ref|ZP_08440404.1| aspartate racemase [Acinetobacter baumannii 6013113]
gi|417572492|ref|ZP_12223346.1| aspartate racemase [Acinetobacter baumannii Canada BC-5]
gi|421622913|ref|ZP_16063805.1| aspartate racemase [Acinetobacter baumannii OIFC074]
gi|421644441|ref|ZP_16084923.1| aspartate racemase [Acinetobacter baumannii IS-235]
gi|421648816|ref|ZP_16089215.1| aspartate racemase [Acinetobacter baumannii IS-251]
gi|421660038|ref|ZP_16100246.1| aspartate racemase [Acinetobacter baumannii Naval-83]
gi|421698972|ref|ZP_16138511.1| aspartate racemase [Acinetobacter baumannii IS-58]
gi|421795421|ref|ZP_16231504.1| aspartate racemase [Acinetobacter baumannii Naval-21]
gi|421802396|ref|ZP_16238349.1| aspartate racemase [Acinetobacter baumannii Canada BC1]
gi|169148404|emb|CAM86269.1| putative Aspartate/Glutamate racemase [Acinetobacter baumannii AYE]
gi|213057744|gb|ACJ42646.1| aspartate racemase [Acinetobacter baumannii AB0057]
gi|213985943|gb|ACJ56242.1| aspartate racemase [Acinetobacter baumannii AB307-0294]
gi|332727581|gb|EGJ59003.1| aspartate racemase [Acinetobacter baumannii 6013150]
gi|332731050|gb|EGJ62353.1| aspartate racemase [Acinetobacter baumannii 6013113]
gi|400208060|gb|EJO39030.1| aspartate racemase [Acinetobacter baumannii Canada BC-5]
gi|404572291|gb|EKA77336.1| aspartate racemase [Acinetobacter baumannii IS-58]
gi|408505225|gb|EKK06950.1| aspartate racemase [Acinetobacter baumannii IS-235]
gi|408514985|gb|EKK16584.1| aspartate racemase [Acinetobacter baumannii IS-251]
gi|408694039|gb|EKL39627.1| aspartate racemase [Acinetobacter baumannii OIFC074]
gi|408706431|gb|EKL51749.1| aspartate racemase [Acinetobacter baumannii Naval-83]
gi|410401918|gb|EKP54053.1| aspartate racemase [Acinetobacter baumannii Naval-21]
gi|410404193|gb|EKP56266.1| aspartate racemase [Acinetobacter baumannii Canada BC1]
Length = 242
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 27/180 (15%)
Query: 82 TVGIVGGASVDST---LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG S +ST + ++VQ N L + +LN S D ++L
Sbjct: 3 TIGLLGGMSWESTALYYQQINRMVQ-----NKLGKLHSAKIILN----SVDFEEIAALQS 53
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
KG Q + + E + LEKAGA CI++ + H ++ +VPF+H+++
Sbjct: 54 KGLW-QEAGAYLAEQAQN----LEKAGADCILVCTNTMHKVAPQIEDAITVPFIHIADAT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME--HTLI 256
AKE+ N++ ++ +L + FY+ +LQ G EV++P+ A + H++I
Sbjct: 109 AKEILSQNIR--------KVALLGTAFTMEQDFYKARLQDRGIEVIIPNDANRKIVHSII 160
>gi|49479190|ref|YP_036748.1| aspartate racemase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|49330746|gb|AAT61392.1| aspartate racemase [Bacillus thuringiensis serovar konkukian str.
97-27]
Length = 226
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 11/102 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV S+P LH+ + AKE+ E N+K RIG+
Sbjct: 69 VEKSGADCLLMCSNTVHLFAEEVESAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEHTLIPAL 259
L + FY+ +L + E ++P D+ + H ++ L
Sbjct: 121 LGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVILNEL 162
>gi|271965998|ref|YP_003340194.1| aspartate racemase [Streptosporangium roseum DSM 43021]
gi|270509173|gb|ACZ87451.1| aspartate racemase [Streptosporangium roseum DSM 43021]
Length = 301
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 116/271 (42%), Gaps = 43/271 (15%)
Query: 71 FCSDALLNQANTVGIVGGASVDSTLNLLGKLVQLSG---EENDFPFLLCSDPLLNKELLS 127
F A L+ VG++GG +T++ GKLV+ + ++ P ++ DP +
Sbjct: 4 FHDRAPLSATRLVGVLGGMGPAATVDFYGKLVEETAATCDQGHVPVVIWGDPRVP----- 58
Query: 128 HDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGC 187
DRS L+ GGG +D LRR L++AG + +PC+ +H + +
Sbjct: 59 -DRS----LSLLGGG---EDP--TPYLRRGVEALKQAGCELLAVPCNTAHAFVPRLADEA 108
Query: 188 SVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD 247
+ + + E A L ++ GVLA + L AG Y + L+ G V+ PD
Sbjct: 109 GLELVSIIEVTADALAADGVRA--------AGVLATSGTLHAGLYADALRRRGVAVIEPD 160
Query: 248 KATMEHTLIPALDALNRKDVEGA--RNLLRIALQVL------LVRAVNTVILASDDMQDL 299
+ + + A+ A+ V+ A R L ++ + +V A ++LA D +
Sbjct: 161 EPG-QRQVTAAIGAVKSGGVQPAHRRALAELSRSLADRGAERVVTACTELVLALDRSRVP 219
Query: 300 LPPDDPLLKKCIDPMDALARSTIKWVKSAEK 330
+P +DP LAR + A++
Sbjct: 220 VP--------VLDPARLLARRVVGLALGAQR 242
>gi|217960099|ref|YP_002338657.1| aspartate racemase family protein [Bacillus cereus AH187]
gi|229139289|ref|ZP_04267861.1| Aspartate racemase [Bacillus cereus BDRD-ST26]
gi|375284614|ref|YP_005105053.1| aspartate racemase family protein [Bacillus cereus NC7401]
gi|423352408|ref|ZP_17330035.1| aspartate racemase [Bacillus cereus IS075]
gi|423568483|ref|ZP_17544730.1| aspartate racemase [Bacillus cereus MSX-A12]
gi|217065312|gb|ACJ79562.1| aspartate racemase family protein [Bacillus cereus AH187]
gi|228644145|gb|EEL00405.1| Aspartate racemase [Bacillus cereus BDRD-ST26]
gi|358353141|dbj|BAL18313.1| aspartate racemase family protein [Bacillus cereus NC7401]
gi|401091507|gb|EJP99647.1| aspartate racemase [Bacillus cereus IS075]
gi|401210771|gb|EJR17522.1| aspartate racemase [Bacillus cereus MSX-A12]
Length = 226
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 72/145 (49%), Gaps = 9/145 (6%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV S+P LH+ + AKE+ E N+K RIG+
Sbjct: 69 VEKSGAECLLMCSNTVHLFAEEVESAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDV-EGARNLLRIALQ 279
L + FY+ +L + E ++P++ L+ L++ + E ++ L +
Sbjct: 121 LGTKQTMEQDFYKSRLANYNIETIIPNEEERNFIHHVILNELSKGIISETSKEKLLQITK 180
Query: 280 VLLVRAVNTVILASDDMQDLLPPDD 304
L+ ++L ++ L+ DD
Sbjct: 181 SLIQNGAEGILLGCTEIPLLISKDD 205
>gi|423617078|ref|ZP_17592912.1| aspartate racemase [Bacillus cereus VD115]
gi|401256263|gb|EJR62473.1| aspartate racemase [Bacillus cereus VD115]
Length = 227
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 12/106 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV + S+P LH+ + AKE+ E N+K RIG+
Sbjct: 70 VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMVEQNIK--------RIGL 121
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLIPALDALNR 264
L + FY +L E ++P ++ T H +I L+ L+R
Sbjct: 122 LGTKQTMEQDFYTSRLAKYNIETIIPNDEERTFIHHVI--LNELSR 165
>gi|206973563|ref|ZP_03234481.1| aspartate racemase family protein [Bacillus cereus H3081.97]
gi|423575702|ref|ZP_17551821.1| aspartate racemase [Bacillus cereus MSX-D12]
gi|206747719|gb|EDZ59108.1| aspartate racemase family protein [Bacillus cereus H3081.97]
gi|401209027|gb|EJR15787.1| aspartate racemase [Bacillus cereus MSX-D12]
Length = 226
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 72/145 (49%), Gaps = 9/145 (6%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV S+P LH+ + AKE+ E N+K RIG+
Sbjct: 69 VEKSGAECLLMCSNTVHLFAEEVESAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDV-EGARNLLRIALQ 279
L + FY+ +L + E ++P++ L+ L++ + E ++ L +
Sbjct: 121 LGTKQTMEQDFYKSRLANYNIETIIPNEEERNFIHHVILNELSKGIISETSKEKLLQITK 180
Query: 280 VLLVRAVNTVILASDDMQDLLPPDD 304
L+ ++L ++ L+ DD
Sbjct: 181 SLIQNGAEGILLGCTEIPLLISQDD 205
>gi|171315873|ref|ZP_02905103.1| aspartate racemase [Burkholderia ambifaria MEX-5]
gi|171098969|gb|EDT43757.1| aspartate racemase [Burkholderia ambifaria MEX-5]
Length = 500
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 118/284 (41%), Gaps = 62/284 (21%)
Query: 65 GSKAAPFCSDALLNQANTVGIVGGASVDSTLNLLGKLVQ---LSGEENDFPFLLCSDPLL 121
GS+AA F +G+VGG +T++ L K+V+ + +++ L+ +P +
Sbjct: 241 GSRAATF----------KIGVVGGVGPAATVDFLDKIVRNTPAARDQDHIKLLVEQNPQI 290
Query: 122 NKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHD 181
DR+ N GGG SL + LE A I +PC+ +H + +
Sbjct: 291 P------DRTE----NLVGGGADPTISLYATCKK-----LEDGDADVIAIPCNTAHAFVE 335
Query: 182 EVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLR-IGVLAKNAILTAGFYQEKLQHEG 240
+ +P +++ L++ LR +GVLA + + +G YQ+ L+ +G
Sbjct: 336 WIQPWLGIPIINMLTVTVAHLRDTY-------PALRQVGVLATSGTIQSGVYQKALESQG 388
Query: 241 FEVVLPDKATMEHTLIPALDALNRKDVEGARNL------------LRIALQVLLVRAVNT 288
V P PAL A + + G + + A+ L+ V+
Sbjct: 389 LRQVAP---------APALQARVMEAIYGTHGVKAGFTTGRCEEDIGAAIDALMDEGVSV 439
Query: 289 VILASDDMQDLLPPDDPLLKK-----CIDPMDALARSTIKWVKS 327
++L ++ LLP + + + +DP D LAR+ I + S
Sbjct: 440 IVLGCTELPILLPGGEYVARNGRRATLVDPTDVLARTCIGYAMS 483
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 17/171 (9%)
Query: 128 HDRSSFSSLNCKGGG----VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEV 183
H F KG G ++ L V ++ R EK G +V+PC LSH + DE+
Sbjct: 43 HVEMIFEQYPFKGSGSGSAATIERKLYVFDMIRA---FEKRGVTTVVLPCFLSHTFIDEL 99
Query: 184 CKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEV 243
S+P + + E V ++ + RIGVLA + + + FE+
Sbjct: 100 KANTSLPIVDIVEAVRSHVRR------KYPDATRIGVLASDYVRDRRLFDAYFTSPPFEI 153
Query: 244 VLP---DKATMEHTLIPALDALNRKDVEG-ARNLLRIALQVLLVRAVNTVI 290
V P + + I D + R ++ G LLR A + L + V ++
Sbjct: 154 VYPRSHEGIDLVTEAIYGADGIKRGNLRGRPVELLRRACEDLADQGVQVIV 204
>gi|386857894|ref|YP_006262071.1| Aspartate racemase family protein [Deinococcus gobiensis I-0]
gi|380001423|gb|AFD26613.1| Aspartate racemase family protein [Deinococcus gobiensis I-0]
Length = 237
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 107/251 (42%), Gaps = 22/251 (8%)
Query: 77 LNQANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSL 136
+ T+GI+GG S ST Q++ D L S PLL L S D + +L
Sbjct: 1 MKTTRTLGILGGMSWTSTAEYY---RQINTAYADREGGLHSAPLL---LHSFDFAQVVAL 54
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
K G L+ RR L+ AGA +++ + H+ ++ +P LH+ +
Sbjct: 55 Q-KAGAWDEAAELLGGAARR----LQDAGAGAMLIATNTMHLVAPQIADMLDIPLLHIVD 109
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEHTL 255
LK A ++ R+G++A + FY+++L+ G E ++P+ A
Sbjct: 110 STGAALKAAGVE--------RVGLIATAFTMEQSFYKDRLRERFGIETIVPEAAERAEVH 161
Query: 256 IPALDALNRKDVE-GARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPM 314
D L R D+ AR R + L+ + +IL ++ L+ P+D + D
Sbjct: 162 RVIFDELCRNDIRPEAREGYRAVMAGLVAQGAQGIILGCTEIPLLVGPEDTTV-PTFDTT 220
Query: 315 DALARSTIKWV 325
A++ + W+
Sbjct: 221 ALHAQAAVNWL 231
>gi|222096164|ref|YP_002530221.1| aspartate racemase [Bacillus cereus Q1]
gi|229196823|ref|ZP_04323564.1| Aspartate racemase [Bacillus cereus m1293]
gi|423605649|ref|ZP_17581542.1| aspartate racemase [Bacillus cereus VD102]
gi|221240222|gb|ACM12932.1| aspartate racemase [Bacillus cereus Q1]
gi|228586546|gb|EEK44623.1| Aspartate racemase [Bacillus cereus m1293]
gi|401243004|gb|EJR49375.1| aspartate racemase [Bacillus cereus VD102]
Length = 226
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV S+P LH+ + AKE+ E N+K RIG+
Sbjct: 69 VEKSGAECLLMCSNTVHLFAEEVESAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDK 248
L + FY+ +L + E ++P++
Sbjct: 121 LGTKQTMEQDFYKSRLANYNIETIIPNE 148
>gi|450115581|ref|ZP_21864009.1| putative amino acid recemase [Streptococcus mutans ST1]
gi|449227865|gb|EMC27263.1| putative amino acid recemase [Streptococcus mutans ST1]
Length = 233
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 23/175 (13%)
Query: 77 LNQANTVGIVGGASVDSTLNLLGKLVQLSGE--ENDFPFLLCSDPLLNKELLSHDRSSFS 134
+N T+G++GG S +ST + QL E + + L + LL S D +
Sbjct: 1 MNTMKTIGLIGGMSWESTTSYY----QLINETIKKELGGLHSAKILL----YSVDFAEIE 52
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
G D + E L + LEKAGA IV+ + H ++ K ++P LH+
Sbjct: 53 HYQASG-----DWAKSAEVLSQIAQKLEKAGADFIVICTNTMHKVAPQIQKQIAIPILHI 107
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
++ A+ L E ++ ++G+L +T FY+EKL G EV++PD+A
Sbjct: 108 AQATAEALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQA 154
>gi|229048455|ref|ZP_04194020.1| amino-acid racemase [Bacillus cereus AH676]
gi|228722885|gb|EEL74265.1| amino-acid racemase [Bacillus cereus AH676]
Length = 235
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 72/137 (52%), Gaps = 14/137 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE GA I MPC+ +H++ +E+ + S+P L++ + + + E N K R+ +
Sbjct: 81 LESTGASFIAMPCNTAHLYFEELQRSLSIPILNIVDETLQSIPE-NTK--------RVAL 131
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDK-ATMEHTLIPALDALNRKDVEGARNLLRIALQ 279
LA A + AG YQ+ + E + +K TM + +I + + +VE AR L AL
Sbjct: 132 LATEATVQAGIYQDGIAKRNIEYIHYEKWQTMINQIITYIKS---GEVEKARKLWS-ALV 187
Query: 280 VLLVRAVNTVILASDDM 296
V L V+TVI+A D+
Sbjct: 188 VQLKDEVDTVIIACTDL 204
>gi|229075088|ref|ZP_04208089.1| Aspartate racemase [Bacillus cereus Rock4-18]
gi|228708019|gb|EEL60191.1| Aspartate racemase [Bacillus cereus Rock4-18]
Length = 227
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 13/147 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV + S+P LH+ + AKE+ E N+K RIG+
Sbjct: 70 VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMVEQNIK--------RIGL 121
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLIPALDALNRKDV-EGARNLLRIA 277
+ + FY +L E ++P ++ T H +I L+ L+R + E +R L
Sbjct: 122 IGTKQTMEQDFYTSRLAKYNIETIIPNDEERTFIHHVI--LNELSRGIISETSREKLIQI 179
Query: 278 LQVLLVRAVNTVILASDDMQDLLPPDD 304
L+ ++L ++ L+ +D
Sbjct: 180 TNSLIQNGAEGILLGCTEIPLLISQND 206
>gi|339008069|ref|ZP_08640643.1| aspartate racemase [Brevibacillus laterosporus LMG 15441]
gi|338775272|gb|EGP34801.1| aspartate racemase [Brevibacillus laterosporus LMG 15441]
Length = 251
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 103/225 (45%), Gaps = 20/225 (8%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGG 141
T+G++GG S +ST + Q+ + L + + + + + + C+
Sbjct: 20 TIGLLGGMSWESTTEYYKNINQMVNQR--------VGALASAKCVVYSVNFEEIVQCQKE 71
Query: 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
G + DD+ + L + LEKAGA C+++ + H ++ ++PFLH+++ A++
Sbjct: 72 G-RWDDATAI--LGQAAQHLEKAGAECLLVCTNTMHKIAKQISASVTIPFLHIADATAEK 128
Query: 202 LKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDA 261
++E ++ +IG+L + F+ EK++ G E+++P++ + D
Sbjct: 129 IREQKLR--------KIGLLGTKFTMEQDFFIEKMKDHGIEIIVPEEKERDIVHQVIFDE 180
Query: 262 LNRKDVEGA-RNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDP 305
L + + A R R + L+ +IL ++ L+ +D
Sbjct: 181 LCKGIITSASRQAYREIMDSLVKAGAEGIILGCTEITLLVNAEDA 225
>gi|229097169|ref|ZP_04228131.1| Aspartate racemase [Bacillus cereus Rock3-29]
gi|423442586|ref|ZP_17419492.1| aspartate racemase [Bacillus cereus BAG4X2-1]
gi|423465653|ref|ZP_17442421.1| aspartate racemase [Bacillus cereus BAG6O-1]
gi|423534999|ref|ZP_17511417.1| aspartate racemase [Bacillus cereus HuB2-9]
gi|423539735|ref|ZP_17516126.1| aspartate racemase [Bacillus cereus HuB4-10]
gi|423624244|ref|ZP_17600022.1| aspartate racemase [Bacillus cereus VD148]
gi|228685980|gb|EEL39896.1| Aspartate racemase [Bacillus cereus Rock3-29]
gi|401173270|gb|EJQ80482.1| aspartate racemase [Bacillus cereus HuB4-10]
gi|401257556|gb|EJR63755.1| aspartate racemase [Bacillus cereus VD148]
gi|402414438|gb|EJV46771.1| aspartate racemase [Bacillus cereus BAG4X2-1]
gi|402417468|gb|EJV49770.1| aspartate racemase [Bacillus cereus BAG6O-1]
gi|402462730|gb|EJV94435.1| aspartate racemase [Bacillus cereus HuB2-9]
Length = 227
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 74/147 (50%), Gaps = 13/147 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV + S+P LH+ + AKE+ E N+K RIG+
Sbjct: 70 VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMVEQNIK--------RIGL 121
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLIPALDALNRKDV-EGARNLLRIA 277
L + FY +L E ++P ++ T H +I L+ L+R + E +R L
Sbjct: 122 LGTKQTMEQDFYTSRLAKYNIETLIPNDEERTFIHHVI--LNELSRGIISETSREKLIQI 179
Query: 278 LQVLLVRAVNTVILASDDMQDLLPPDD 304
L+ ++L ++ L+ +D
Sbjct: 180 TNSLIQNGAEGILLGCTEIPLLISQND 206
>gi|423459312|ref|ZP_17436109.1| aspartate racemase [Bacillus cereus BAG5X2-1]
gi|401144390|gb|EJQ51920.1| aspartate racemase [Bacillus cereus BAG5X2-1]
Length = 226
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 11/102 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV S+P LH+ + AKE+ E N+K RIG+
Sbjct: 69 VEKSGADCLLMCSNTIHLFAEEVENAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEHTLIPAL 259
L + FY+ +L + E ++P D+ + H ++ L
Sbjct: 121 LGTKQTMEQDFYKSRLANFNIETIIPTEEDRNFIHHVILNEL 162
>gi|421669323|ref|ZP_16109350.1| aspartate racemase [Acinetobacter baumannii OIFC099]
gi|410389066|gb|EKP41488.1| aspartate racemase [Acinetobacter baumannii OIFC099]
Length = 242
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 27/180 (15%)
Query: 82 TVGIVGGASVDST---LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG S +ST + ++VQ N L + +LN S D + L
Sbjct: 3 TIGLLGGMSWESTALYYQQINRMVQ-----NKLGKLHSAKIILN----SVDFEEIAVLQS 53
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
KG Q + + E + LEKAGA CI++ + H ++ +VPF+H+++
Sbjct: 54 KGLW-QEAGAYLAEQAQN----LEKAGADCILVCTNTMHKVAPQIEDAITVPFIHIADAT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME--HTLI 256
AKE+ N++ ++ +L L FY+ +LQ G EV++P+ A + H++I
Sbjct: 109 AKEILSQNIR--------KVALLGTAFTLEQDFYKARLQDHGIEVIIPNDANRKIVHSII 160
>gi|229103249|ref|ZP_04233932.1| Aspartate racemase [Bacillus cereus Rock3-28]
gi|228680088|gb|EEL34282.1| Aspartate racemase [Bacillus cereus Rock3-28]
Length = 227
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 74/147 (50%), Gaps = 13/147 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV + S+P LH+ + AKE+ E N+K RIG+
Sbjct: 70 VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEIVEQNIK--------RIGL 121
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLIPALDALNRKDV-EGARNLLRIA 277
L + FY +L E ++P ++ T H +I L+ L+R + E +R L
Sbjct: 122 LGTKQTMEQDFYTSRLAKYNIETLIPNDEERTFIHHVI--LNELSRGIISETSREKLIQI 179
Query: 278 LQVLLVRAVNTVILASDDMQDLLPPDD 304
L+ ++L ++ L+ +D
Sbjct: 180 TNSLIQNGAEGILLGCTEIPLLISQND 206
>gi|218897646|ref|YP_002446057.1| aspartate racemase [Bacillus cereus G9842]
gi|228905578|ref|ZP_04069526.1| Aspartate racemase [Bacillus thuringiensis IBL 4222]
gi|423360386|ref|ZP_17337889.1| aspartate racemase [Bacillus cereus VD022]
gi|434375556|ref|YP_006610200.1| aspartate racemase [Bacillus thuringiensis HD-789]
gi|218542682|gb|ACK95076.1| aspartate racemase family protein [Bacillus cereus G9842]
gi|228854053|gb|EEM98763.1| Aspartate racemase [Bacillus thuringiensis IBL 4222]
gi|401082476|gb|EJP90746.1| aspartate racemase [Bacillus cereus VD022]
gi|401874113|gb|AFQ26280.1| aspartate racemase [Bacillus thuringiensis HD-789]
Length = 226
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 78/148 (52%), Gaps = 15/148 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV + S+P LH+ + AKE+ + N+K RIG+
Sbjct: 69 VEKSGADCLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMVKQNIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKA--TMEHTLIPALDALNRKDVEGA--RNLLRI 276
L + FY+ +L E ++P++ T+ H +I LD L++ + A LL+I
Sbjct: 121 LGTKQTMEQDFYKSRLAKYNIETIIPNEEERTVIHHVI--LDELSKGIISEASKEKLLQI 178
Query: 277 ALQVLLVRAVNTVILASDDMQDLLPPDD 304
+ L+ ++L ++ L+ +D
Sbjct: 179 T-KSLIQNGAEGILLGCTEIPLLISQND 205
>gi|261886484|ref|ZP_06010523.1| aspartate racemase [Campylobacter fetus subsp. venerealis str.
Azul-94]
Length = 232
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 23/169 (13%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLN--CKG 140
VG++GG S +STL L+ E D L S + L H+ F S N K
Sbjct: 7 VGLIGGMSWESTLTYYK---VLNEEIRDRLGGLHSAKCIVYSLDFHEIEKFQSQNEWQKS 63
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
G V LD +L LEKAGA C+++ + H D + +PF+H+++ A+
Sbjct: 64 GKVLLDAAL----------NLEKAGAECVMICTNTMHKVADMITASLKIPFIHIADVTAQ 113
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
LK+ K + +L +T FY++K+ + EVV+P+K+
Sbjct: 114 ALKQNGSK--------KALLLGTKYTMTESFYKDKISNNSIEVVVPNKS 154
>gi|327401693|ref|YP_004342532.1| aspartate racemase [Archaeoglobus veneficus SNP6]
gi|327317201|gb|AEA47817.1| aspartate racemase [Archaeoglobus veneficus SNP6]
Length = 229
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 21/178 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +STL +++ + +E L + ++ S D L +G
Sbjct: 2 KTIGLIGGMSWESTLEYY-RIINETVKEK-LGGLHSAKCII----YSVDFEEIEKLQHEG 55
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
+L + +I R LEKAGA +++ + H +EV +G S+P LH+++ A+
Sbjct: 56 KWKELTEVMIDAAQR-----LEKAGADFVIICTNTMHKVAEEVQEGISIPLLHIADVTAE 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLI 256
++KE ++ +G+L + FY++KL G EV++P D+ + H++I
Sbjct: 111 KIKEKGLR--------NVGLLGTKFTMEEDFYKKKLGESGIEVIIPEEDERVVVHSVI 160
>gi|75762859|ref|ZP_00742675.1| Aspartate racemase [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|74489652|gb|EAO53052.1| Aspartate racemase [Bacillus thuringiensis serovar israelensis ATCC
35646]
Length = 246
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 78/148 (52%), Gaps = 15/148 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV + S+P LH+ + AKE+ + N+K RIG+
Sbjct: 89 VEKSGADCLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMVKQNIK--------RIGL 140
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKA--TMEHTLIPALDALNRKDVEGA--RNLLRI 276
L + FY+ +L E ++P++ T+ H +I LD L++ + A LL+I
Sbjct: 141 LGTKQTMEQDFYKSRLAKYNIETIIPNEEERTVIHHVI--LDELSKGIISEASKEKLLQI 198
Query: 277 ALQVLLVRAVNTVILASDDMQDLLPPDD 304
+ L+ ++L ++ L+ +D
Sbjct: 199 T-KSLIQNGAEGILLGCTEIPLLISQND 225
>gi|421874559|ref|ZP_16306162.1| putative aspartate/glutamate racemase [Brevibacillus laterosporus
GI-9]
gi|372456415|emb|CCF15711.1| putative aspartate/glutamate racemase [Brevibacillus laterosporus
GI-9]
Length = 234
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 103/226 (45%), Gaps = 20/226 (8%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +ST + Q+ + L + + + + + + C+
Sbjct: 2 KTIGLLGGMSWESTTEYYKHINQMVNQR--------VGALASAKCVVYSVNFEEIVQCQK 53
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
G + DD+ + L + LEKAGA C+++ + H ++ ++PFLH+++ A+
Sbjct: 54 EG-RWDDAAAI--LGQAAQHLEKAGAECLLVCTNTMHKIAKQISASVTIPFLHIADATAE 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALD 260
+++E ++ +IG+L + F+ EK++ G E+++P++ + D
Sbjct: 111 KIREQKLR--------KIGLLGTKFTMEQDFFIEKMKDHGIEIIVPEEKERDIVHQVIFD 162
Query: 261 ALNRKDVEGA-RNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDP 305
L + + A R R + L+ +IL ++ L+ +D
Sbjct: 163 ELCKGIITSASRQAYREIMDSLVKAGAEGIILGCTEITLLVNAEDA 208
>gi|229091655|ref|ZP_04222856.1| Aspartate racemase [Bacillus cereus Rock3-42]
gi|228691600|gb|EEL45352.1| Aspartate racemase [Bacillus cereus Rock3-42]
Length = 226
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ EV S+P LH+ + AKE+ E N+K RIG+
Sbjct: 69 VEKSGADCLLMCSNTVHLFAKEVESAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEHTLIPAL 259
L + FY+ +L + E ++P D+ + H ++ L
Sbjct: 121 LGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVILNEL 162
>gi|421626343|ref|ZP_16067172.1| aspartate racemase [Acinetobacter baumannii OIFC098]
gi|421651917|ref|ZP_16092284.1| aspartate racemase [Acinetobacter baumannii OIFC0162]
gi|421695016|ref|ZP_16134630.1| aspartate racemase [Acinetobacter baumannii WC-692]
gi|425750196|ref|ZP_18868163.1| aspartate racemase [Acinetobacter baumannii WC-348]
gi|445460018|ref|ZP_21447927.1| aspartate racemase [Acinetobacter baumannii OIFC047]
gi|404566584|gb|EKA71726.1| aspartate racemase [Acinetobacter baumannii WC-692]
gi|408507850|gb|EKK09544.1| aspartate racemase [Acinetobacter baumannii OIFC0162]
gi|408695614|gb|EKL41169.1| aspartate racemase [Acinetobacter baumannii OIFC098]
gi|425487598|gb|EKU53956.1| aspartate racemase [Acinetobacter baumannii WC-348]
gi|444773253|gb|ELW97349.1| aspartate racemase [Acinetobacter baumannii OIFC047]
Length = 242
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 27/180 (15%)
Query: 82 TVGIVGGASVDST---LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG S +ST + ++VQ N L + +LN S D + L
Sbjct: 3 TIGLLGGMSWESTALYYQQINRMVQ-----NKLGKLHSAKIILN----SVDFEEIAVLQS 53
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
KG Q + + E + LEKAGA CI++ + H ++ +VPF+H+++
Sbjct: 54 KGLW-QEAGAYLAEQAQN----LEKAGADCILVCTNTMHKVAPQIEDAITVPFIHIADAT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME--HTLI 256
AKE+ N++ ++ +L + FY+ +LQ G EV++P+ A + H++I
Sbjct: 109 AKEILSQNIR--------KVALLGTAFTMEQDFYKARLQDHGIEVIIPNDANRKIVHSII 160
>gi|423611092|ref|ZP_17586953.1| aspartate racemase [Bacillus cereus VD107]
gi|401248545|gb|EJR54867.1| aspartate racemase [Bacillus cereus VD107]
Length = 227
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 75/149 (50%), Gaps = 17/149 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+E +GA C+++ + H++ +EV K S+P LH+ + AK++ E N+K RIG+
Sbjct: 70 VENSGAECLLICSNTVHLFAEEVEKAISIPLLHIGDVSAKKMVEHNIK--------RIGL 121
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEHTLIPALDALNRKDVEGA--RNLLR 275
L + FY+ +L + E ++P D+ + H + L L+R + A LL+
Sbjct: 122 LGTKQTMEQDFYKSRLANYNIETIIPNEEDRTFIHHVI---LSELSRGIISHASKEKLLQ 178
Query: 276 IALQVLLVRAVNTVILASDDMQDLLPPDD 304
IA L+ ++L ++ L+ +D
Sbjct: 179 IA-NTLIKNGAEGILLGCTEIPLLISQND 206
>gi|421806679|ref|ZP_16242541.1| aspartate racemase [Acinetobacter baumannii OIFC035]
gi|410417222|gb|EKP68992.1| aspartate racemase [Acinetobacter baumannii OIFC035]
Length = 242
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 82/171 (47%), Gaps = 25/171 (14%)
Query: 82 TVGIVGGASVDST---LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG S +ST + ++VQ N L + +LN S D ++L
Sbjct: 3 TIGLLGGMSWESTALYYQQINRMVQ-----NKLGKLHSAKIILN----SVDFEEIATLQA 53
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
KG + L + + LEKAGA CI++ + H ++ +VPF+H+++
Sbjct: 54 KGLWQEAGAYLAEQAMN-----LEKAGADCILVCTNTMHKVAPQIENAITVPFIHIADAT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
AKE+ N++ ++ +L + FY+ +LQ + EV++P +A
Sbjct: 109 AKEILSQNIR--------KVALLGTAFTMEQDFYKARLQEQRIEVIIPSEA 151
>gi|450072328|ref|ZP_21848549.1| putative amino acid recemase [Streptococcus mutans M2A]
gi|449211358|gb|EMC11763.1| putative amino acid recemase [Streptococcus mutans M2A]
Length = 233
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 27/177 (15%)
Query: 77 LNQANTVGIVGGASVDST---LNLLGKLVQLS-GEENDFPFLLCSDPLLNKELLSHDRSS 132
+N T+G++GG S +ST L+ + ++ GE + LL S E H ++S
Sbjct: 1 MNTMKTIGLIGGMSWESTTSYYQLINETIKKELGELHSAKILLYSVDFAEIE---HYQAS 57
Query: 133 FSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFL 192
G + ++ + +K LE+AGA IV+ + H ++ K ++P L
Sbjct: 58 ---------GDWAKSAEVLSQIAQK---LEQAGADFIVICTNTMHKVAPQIQKQIAIPIL 105
Query: 193 HVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
H+++ A+ L E ++ ++G+L +T FY+EKL G EV++PD+A
Sbjct: 106 HIAQATAEALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQA 154
>gi|403676295|ref|ZP_10938294.1| aspartate racemase [Acinetobacter sp. NCTC 10304]
Length = 242
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 27/180 (15%)
Query: 82 TVGIVGGASVDST---LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG S +ST + ++VQ N L + +LN S D + L
Sbjct: 3 TIGLLGGMSWESTALYYQQINRMVQ-----NKLGKLHSAKIILN----SVDFEEIAVLQS 53
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
KG Q + + E + LEKAGA CI++ + H ++ +VPF+H+++
Sbjct: 54 KGLW-QEAGAYLAEQAQN----LEKAGADCILVCTNTMHKVAPQIEDAITVPFIHIADAT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME--HTLI 256
AKE+ N++ ++ +L + FY+ +LQ G EV++P+ A + H++I
Sbjct: 109 AKEILSQNIR--------KVALLGTAFTMEQDFYKARLQDHGIEVIIPNDANRKIVHSII 160
>gi|423402731|ref|ZP_17379904.1| aspartate racemase [Bacillus cereus BAG2X1-2]
gi|423476639|ref|ZP_17453354.1| aspartate racemase [Bacillus cereus BAG6X1-1]
gi|401650323|gb|EJS67895.1| aspartate racemase [Bacillus cereus BAG2X1-2]
gi|402432946|gb|EJV65001.1| aspartate racemase [Bacillus cereus BAG6X1-1]
Length = 226
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV S+P LH+ + AKE+ E N+K RIG+
Sbjct: 69 VEKSGADCLLMCSNTVHLFAEEVENAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDK 248
L + FY+ +L + E ++P++
Sbjct: 121 LGTKQTMEQDFYKSRLTNFNIETIIPNE 148
>gi|424821208|ref|ZP_18246246.1| aspartate racemase [Campylobacter fetus subsp. venerealis NCTC
10354]
gi|342327987|gb|EGU24471.1| aspartate racemase [Campylobacter fetus subsp. venerealis NCTC
10354]
Length = 232
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 23/169 (13%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLN--CKG 140
VG++GG S +STL L+ E D L S + L H+ F S N K
Sbjct: 7 VGLIGGMSWESTLTYYK---VLNEEIRDRLGGLHSAKCIVYSLDFHEIEKFQSQNEWQKS 63
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
G V LD +L LEKAGA C+++ + H D + +PF+H+++ A+
Sbjct: 64 GKVLLDAAL----------NLEKAGAECVMICTNTMHKVADMITASLKIPFIHIADVTAQ 113
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
LK+ K + +L +T FY++K+ EVV+P+K+
Sbjct: 114 ALKQNGSK--------KALLLGTKYTMTESFYKDKISKNSIEVVVPNKS 154
>gi|445405410|ref|ZP_21431387.1| aspartate racemase [Acinetobacter baumannii Naval-57]
gi|444782160|gb|ELX06071.1| aspartate racemase [Acinetobacter baumannii Naval-57]
Length = 242
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 27/180 (15%)
Query: 82 TVGIVGGASVDST---LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG S +ST + ++VQ N L + +LN S D ++L
Sbjct: 3 TIGLLGGMSWESTSLYYQQINRMVQ-----NKLGKLHSAKIILN----SVDFEEIAALQA 53
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
KG Q + + E + LEKAGA CI++ + H ++ +VPF+H+++
Sbjct: 54 KGLW-QEAGAYLAEQAQN----LEKAGADCILVCTNTMHKVAPQIEDAITVPFIHIADAT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME--HTLI 256
AKE+ N++ ++ +L + FY+ +LQ G EV++P+ A + H++I
Sbjct: 109 AKEILSQNIR--------KVALLGTAFTMEQDFYKARLQDLGIEVIIPNDANRKIVHSII 160
>gi|428205457|ref|YP_007089810.1| aspartate racemase [Chroococcidiopsis thermalis PCC 7203]
gi|428007378|gb|AFY85941.1| aspartate racemase [Chroococcidiopsis thermalis PCC 7203]
Length = 257
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 98/228 (42%), Gaps = 28/228 (12%)
Query: 82 TVGIVGGASVDSTLNLL----GKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLN 137
T+GI+GG S +T + Q+ G N L+CS +F+++
Sbjct: 15 TIGILGGMSSQATAEYYRLINAGINQVRGGWNAAELLICS-------------VNFANIE 61
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
Q DD+ L K + LE+AGA IVM + H ++ +P +H+ +
Sbjct: 62 AFVRREQWDDA--ANYLVDKALKLEQAGADFIVMATNTLHRVAPQIEAAIEIPLIHIVDV 119
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIP 257
A E+++ + ++G+L ++ A FY+++ + G E++ P +
Sbjct: 120 TAAEIRQQGIT--------KVGILGTKPVMQADFYRDRFKLHGIELIAPSDRQCQIIDTI 171
Query: 258 ALDALNRKDVEG-ARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
D L + ++ +R + +Q L R ++L ++ L+ P+D
Sbjct: 172 IFDELVHRSIQDESRQIYIEIMQDLGDRGAQVMVLGCTEISLLVEPED 219
>gi|423640182|ref|ZP_17615800.1| aspartate racemase [Bacillus cereus VD166]
gi|401281581|gb|EJR87488.1| aspartate racemase [Bacillus cereus VD166]
Length = 224
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 14/137 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE GA I MPC+ +H++ +E+ + S+P L++ + + + E N K R+ +
Sbjct: 70 LESTGASFIAMPCNTAHLYFEELQRSLSIPILNIVDETLQSIPE-NTK--------RVAL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDK-ATMEHTLIPALDALNRKDVEGARNLLRIALQ 279
LA A + AG YQ+ + E + +K TM + +I + + +VE AR L + L
Sbjct: 121 LATEATVQAGIYQDGIAKRNIEYIHYEKWQTMINQIITYIKS---GEVEKARKLWSV-LV 176
Query: 280 VLLVRAVNTVILASDDM 296
V L V+TVI+A D+
Sbjct: 177 VQLKDEVDTVIIACTDL 193
>gi|336450530|ref|ZP_08620977.1| aspartate racemase [Idiomarina sp. A28L]
gi|336282353|gb|EGN75585.1| aspartate racemase [Idiomarina sp. A28L]
Length = 229
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 31/173 (17%)
Query: 81 NTVGIVGGASVDST---LNLLGKLV-QLSGEENDFPFLLCSDPLLNKELLSH--DRSSFS 134
T+G++GG S +ST LL + V Q G + +L S L H D + +
Sbjct: 2 KTIGLIGGMSWESTQVYYRLLNENVKQRLGGHHSAKVVLVSVDFAEIAELQHAGDWQATA 61
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
+ C LE+AGA I++ + H DEV SVP LH+
Sbjct: 62 DILCDAAQA-----------------LERAGADFILIGTNTMHKIADEVAAAVSVPLLHI 104
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD 247
+ A LK ++K R+G+L + GFY+ +LQ G EVV+P+
Sbjct: 105 IDVTAAALKARSIK--------RVGLLGTQFTMEQGFYRARLQAHGIEVVIPE 149
>gi|193077759|gb|ABO12629.2| Aspartate racemase [Acinetobacter baumannii ATCC 17978]
Length = 242
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 27/180 (15%)
Query: 82 TVGIVGGASVDST---LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG S +ST + ++VQ N L + +LN S D ++L
Sbjct: 3 TIGLLGGMSWESTSLYYQQINRMVQ-----NKLGKLHSAKIILN----SVDFEEIAALQS 53
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
KG Q + + E + LEKAGA CI++ + H ++ +VPF+H+++
Sbjct: 54 KGLW-QEAGAYLAEQAQN----LEKAGADCILVCTNTMHKVAPQIEDAITVPFIHIADAT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME--HTLI 256
AKE+ N++ ++ +L + FY+ +LQ G EV++P+ A + H++I
Sbjct: 109 AKEILSQNIR--------KVALLGTAFTMEQDFYKARLQDLGIEVIIPNDANRKIVHSII 160
>gi|229030333|ref|ZP_04186379.1| Aspartate racemase [Bacillus cereus AH1271]
gi|228730965|gb|EEL81901.1| Aspartate racemase [Bacillus cereus AH1271]
Length = 196
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 11/102 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+E +GA C++M + H++ +EV + S+P LH+ + AKE+ E N+K RIG+
Sbjct: 70 VENSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMVEQNIK--------RIGL 121
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEHTLIPAL 259
L + FY+ +L + E ++P D+ + H ++ L
Sbjct: 122 LGTRQTMEQDFYKSRLANYNIETIIPIKEDRDFIHHVILNEL 163
>gi|423562959|ref|ZP_17539235.1| aspartate racemase [Bacillus cereus MSX-A1]
gi|401199642|gb|EJR06540.1| aspartate racemase [Bacillus cereus MSX-A1]
Length = 226
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV + S+P LH+ + AKE+ + N+K RIG+
Sbjct: 69 VEKSGADCLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMVKQNIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKA--TMEHTLIPALDALNRKDVEGA--RNLLRI 276
L + FY+ +L E ++P++ T+ H +I LD L++ + A LL+I
Sbjct: 121 LGTKQTMEQDFYKSRLAKYNIETIIPNEEERTVIHHVI--LDELSKGIISEASKEKLLQI 178
Query: 277 A 277
Sbjct: 179 T 179
>gi|229161526|ref|ZP_04289506.1| Aspartate racemase [Bacillus cereus R309803]
gi|228621771|gb|EEK78617.1| Aspartate racemase [Bacillus cereus R309803]
Length = 226
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV S+P LH+ + AKE+ E ++K RIG+
Sbjct: 69 VEKSGAECLLMCSNTVHLFAEEVESAISIPLLHIGDVSAKEMVEQDIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDK 248
L + FY +L + E ++P+K
Sbjct: 121 LGTKQTMEQDFYTSRLANYNIETIIPNK 148
>gi|425899330|ref|ZP_18875921.1| aspartate racemase [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|397889940|gb|EJL06422.1| aspartate racemase [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
Length = 234
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 110/250 (44%), Gaps = 31/250 (12%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNC-- 138
T+G++GG S +S+ +L+ + PL + LL + F +
Sbjct: 2 RTIGLIGGMSWESSAEYY-RLINQQVRDR-------LGPLRSARLLMYS-VDFGPVEQAQ 52
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
G L ++V+ RR LE GA C+V+ + H DE+ SVPFLH+++
Sbjct: 53 HAGRWDLAAGILVDAARR----LEAGGAECVVLCTNTMHKVADEIQAVLSVPFLHIADPT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPA 258
A+ LEAG+ LR+G+L + F +++L G +V++PD +
Sbjct: 109 AE-------AALEAGT-LRVGLLGTAFTMEQDFLKQRLLDRGLKVLVPDAVDRQAVHRII 160
Query: 259 LDALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD---PLLKKCIDPM 314
D L + E +R + +Q L R +IL ++ LL P+ PLL D
Sbjct: 161 YDELCVGVISEASRQRYQQVIQALRERGAQAIILGCTEIGLLLKPEHSPLPLL----DTT 216
Query: 315 DALARSTIKW 324
+ AR+ + +
Sbjct: 217 ELHARAAVAF 226
>gi|118475485|ref|YP_892551.1| aspartate racemase [Campylobacter fetus subsp. fetus 82-40]
gi|118414711|gb|ABK83131.1| aspartate racemase [Campylobacter fetus subsp. fetus 82-40]
Length = 229
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 23/169 (13%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLN--CKG 140
VG++GG S +STL L+ E D L S + L H+ F S N K
Sbjct: 4 VGLIGGMSWESTLTYYK---VLNEEIRDRLGGLHSAKCIVYSLDFHEIEKFQSQNEWQKS 60
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
G V LD +L LEKAGA C+++ + H D + +PF+H+++ A+
Sbjct: 61 GKVLLDAAL----------NLEKAGAECVMICTNTMHKVADMITASLKIPFIHIADVTAQ 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
LK+ K + +L +T FY++K+ EVV+P+K+
Sbjct: 111 ALKQNGSK--------KALLLGTKYTMTESFYKDKISKNSIEVVVPNKS 151
>gi|184158722|ref|YP_001847061.1| aspartate racemase [Acinetobacter baumannii ACICU]
gi|332873715|ref|ZP_08441658.1| aspartate racemase [Acinetobacter baumannii 6014059]
gi|384131247|ref|YP_005513859.1| Aspartate racemase [Acinetobacter baumannii 1656-2]
gi|387123343|ref|YP_006289225.1| aspartate racemase [Acinetobacter baumannii MDR-TJ]
gi|407933347|ref|YP_006848990.1| aspartate racemase [Acinetobacter baumannii TYTH-1]
gi|417569283|ref|ZP_12220141.1| aspartate racemase [Acinetobacter baumannii OIFC189]
gi|417578366|ref|ZP_12229203.1| aspartate racemase [Acinetobacter baumannii Naval-17]
gi|417869036|ref|ZP_12514031.1| aspartate racemase [Acinetobacter baumannii ABNIH1]
gi|417873997|ref|ZP_12518858.1| aspartate racemase [Acinetobacter baumannii ABNIH2]
gi|417879303|ref|ZP_12523877.1| aspartate racemase [Acinetobacter baumannii ABNIH3]
gi|417880925|ref|ZP_12525297.1| aspartate racemase [Acinetobacter baumannii ABNIH4]
gi|421629795|ref|ZP_16070510.1| aspartate racemase [Acinetobacter baumannii OIFC180]
gi|421686427|ref|ZP_16126182.1| aspartate racemase [Acinetobacter baumannii IS-143]
gi|421705264|ref|ZP_16144701.1| aspartate racemase [Acinetobacter baumannii ZWS1122]
gi|421709053|ref|ZP_16148419.1| aspartate racemase [Acinetobacter baumannii ZWS1219]
gi|421792897|ref|ZP_16229042.1| aspartate racemase [Acinetobacter baumannii Naval-2]
gi|424051775|ref|ZP_17789307.1| aspartate racemase [Acinetobacter baumannii Ab11111]
gi|424063322|ref|ZP_17800807.1| aspartate racemase [Acinetobacter baumannii Ab44444]
gi|425751288|ref|ZP_18869236.1| aspartate racemase [Acinetobacter baumannii Naval-113]
gi|445473451|ref|ZP_21452776.1| aspartate racemase [Acinetobacter baumannii OIFC338]
gi|445483657|ref|ZP_21456427.1| aspartate racemase [Acinetobacter baumannii Naval-78]
gi|183210316|gb|ACC57714.1| Aspartate racemase [Acinetobacter baumannii ACICU]
gi|322507467|gb|ADX02921.1| Aspartate racemase [Acinetobacter baumannii 1656-2]
gi|332738103|gb|EGJ68987.1| aspartate racemase [Acinetobacter baumannii 6014059]
gi|342228939|gb|EGT93810.1| aspartate racemase [Acinetobacter baumannii ABNIH3]
gi|342229937|gb|EGT94782.1| aspartate racemase [Acinetobacter baumannii ABNIH2]
gi|342231443|gb|EGT96252.1| aspartate racemase [Acinetobacter baumannii ABNIH1]
gi|342239410|gb|EGU03815.1| aspartate racemase [Acinetobacter baumannii ABNIH4]
gi|385877835|gb|AFI94930.1| aspartate racemase [Acinetobacter baumannii MDR-TJ]
gi|395553506|gb|EJG19512.1| aspartate racemase [Acinetobacter baumannii OIFC189]
gi|395569063|gb|EJG29733.1| aspartate racemase [Acinetobacter baumannii Naval-17]
gi|404569029|gb|EKA74124.1| aspartate racemase [Acinetobacter baumannii IS-143]
gi|404665331|gb|EKB33294.1| aspartate racemase [Acinetobacter baumannii Ab11111]
gi|404674499|gb|EKB42243.1| aspartate racemase [Acinetobacter baumannii Ab44444]
gi|407188533|gb|EKE59772.1| aspartate racemase [Acinetobacter baumannii ZWS1122]
gi|407188626|gb|EKE59864.1| aspartate racemase [Acinetobacter baumannii ZWS1219]
gi|407901928|gb|AFU38759.1| aspartate racemase [Acinetobacter baumannii TYTH-1]
gi|408699144|gb|EKL44624.1| aspartate racemase [Acinetobacter baumannii OIFC180]
gi|410398988|gb|EKP51191.1| aspartate racemase [Acinetobacter baumannii Naval-2]
gi|425500231|gb|EKU66256.1| aspartate racemase [Acinetobacter baumannii Naval-113]
gi|444768225|gb|ELW92442.1| aspartate racemase [Acinetobacter baumannii Naval-78]
gi|444769290|gb|ELW93486.1| aspartate racemase [Acinetobacter baumannii OIFC338]
Length = 242
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 27/180 (15%)
Query: 82 TVGIVGGASVDST---LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG S +ST + ++VQ N L + +LN S D ++L
Sbjct: 3 TIGLLGGMSWESTALYYQQINRMVQ-----NKLGKLHSAKIILN----SVDFEEIAALQS 53
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
KG Q + + E + LEKAGA CI++ + H ++ +VPF+H+++
Sbjct: 54 KGLW-QEAGAYLAEQAQN----LEKAGADCILVCTNTMHKVAPQIEDAITVPFIHIADAT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME--HTLI 256
AKE+ N++ ++ +L + FY+ +LQ G EV++P+ A + H++I
Sbjct: 109 AKEILSQNIR--------KVALLGTAFTMEQDFYKARLQDLGIEVIIPNDANRKIVHSII 160
>gi|374293714|ref|YP_005040737.1| putative aspartate racemase [Azospirillum lipoferum 4B]
gi|357427117|emb|CBS90055.1| Putative aspartate racemase [Azospirillum lipoferum 4B]
Length = 244
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 19/184 (10%)
Query: 125 LLSHDRSSFSSLNCKGGGVQLDDS--LIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDE 182
+ S D + +L G + DD+ L+++ RR LE+ GA +V+ + H D+
Sbjct: 52 MWSFDFAEIEALQHAG---RWDDATALMIDAARR----LERGGADFVVICTNTMHRMADQ 104
Query: 183 VCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKL-QHEGF 241
V +P LH+++ A+ ++ A ++ R+G+L + FY+ +L Q G
Sbjct: 105 VQAAIGLPLLHIADPTAERIRAAGLR--------RVGLLGTAFTMEQDFYKGRLVQKHGL 156
Query: 242 EVVLPDKATMEHTLIPALDALNRKDVEGA-RNLLRIALQVLLVRAVNTVILASDDMQDLL 300
EV++PD A D L + +E A R R + L+ R VIL ++ L+
Sbjct: 157 EVLVPDDADRSTVHRVIYDELVQGRIEEASRQAYRGVIARLVERGAEAVILGCTEIMLLV 216
Query: 301 PPDD 304
P+D
Sbjct: 217 RPED 220
>gi|449995365|ref|ZP_21822956.1| putative amino acid recemase [Streptococcus mutans A9]
gi|449184552|gb|EMB86488.1| putative amino acid recemase [Streptococcus mutans A9]
Length = 233
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 23/175 (13%)
Query: 77 LNQANTVGIVGGASVDSTLNLLGKLVQLSGE--ENDFPFLLCSDPLLNKELLSHDRSSFS 134
+N T+G++GG S +ST QL E + + L + LL S D +
Sbjct: 1 MNNMKTIGLIGGMSWEST----ATYYQLINETIKKELGGLHSAKILL----YSVDFAEIE 52
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
G D + E L + LE+AGA IV+ + H ++ K ++P LH+
Sbjct: 53 HYQASG-----DWAKSAEVLSQIAQKLEQAGADFIVICTNTMHKVAPQIQKQIAIPILHI 107
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
++ A+ L E ++ ++G+L +T FY+EKL G EV++PD+A
Sbjct: 108 AQATAEALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQA 154
>gi|418031341|ref|ZP_12669826.1| amino acid racemase [Bacillus subtilis subsp. subtilis str. SC-8]
gi|351472400|gb|EHA32513.1| amino acid racemase [Bacillus subtilis subsp. subtilis str. SC-8]
Length = 230
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 107/250 (42%), Gaps = 42/250 (16%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + K++ +L G ND +P ++ C P + HD
Sbjct: 5 IGILAGMGPKSTSPFIDKVIDYCQKLYGASNDIDYPHMMIYSCPTPFYADRPIDHDEMKK 64
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
+ ++ G V+L EK G I +PC+ +H++++E+ + SVP LH
Sbjct: 65 AIID---GAVKL----------------EKTGVDFIALPCNTAHVYYEEIQQALSVPMLH 105
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME- 252
+ E KE+ K + VL + + YQ+ L+ G EVV D
Sbjct: 106 IVEETIKEIPHPAKKAV---------VLGTEPTIQSAIYQKVLKANGQEVVHKDHWQQAV 156
Query: 253 HTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCID 312
+ LI A+ N +E ++ L + + + A + +I A D+ +L + ID
Sbjct: 157 NQLIAAIKQPNH--MEHSKALWQTLYEEISQHA-DIIISACTDLNAVLDHTQSEI-PIID 212
Query: 313 PMDALARSTI 322
LA+ST+
Sbjct: 213 SSACLAKSTV 222
>gi|450061213|ref|ZP_21843670.1| putative amino acid recemase [Streptococcus mutans NLML5]
gi|449207554|gb|EMC08225.1| putative amino acid recemase [Streptococcus mutans NLML5]
Length = 233
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 23/175 (13%)
Query: 77 LNQANTVGIVGGASVDSTLNLLGKLVQLSGE--ENDFPFLLCSDPLLNKELLSHDRSSFS 134
+N T+G++GG S +ST + QL E + + L + LL S D +
Sbjct: 1 MNNMKTIGLIGGMSWESTTSYY----QLINETIKKELGGLHSAKILL----YSVDFAEIE 52
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
G D + E L + LE+AGA IV+ + H ++ K ++P LH+
Sbjct: 53 HYQASG-----DWAKSAEVLSQIAQKLEQAGADFIVICTNTMHKVAPQIQKQIAIPILHI 107
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
++ A+ L E ++ ++G+L +T FY+EKL G EV++PD+A
Sbjct: 108 AQATAEALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQA 154
>gi|423453897|ref|ZP_17430750.1| aspartate racemase [Bacillus cereus BAG5X1-1]
gi|423468986|ref|ZP_17445730.1| aspartate racemase [Bacillus cereus BAG6O-2]
gi|423559652|ref|ZP_17535954.1| aspartate racemase [Bacillus cereus MC67]
gi|401136867|gb|EJQ44451.1| aspartate racemase [Bacillus cereus BAG5X1-1]
gi|401187821|gb|EJQ94892.1| aspartate racemase [Bacillus cereus MC67]
gi|402440337|gb|EJV72330.1| aspartate racemase [Bacillus cereus BAG6O-2]
Length = 227
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 73/147 (49%), Gaps = 13/147 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+E +GA C++M + H++ +EV + S+P LH+ + AKE+ E N+K RIG+
Sbjct: 70 VENSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMVEQNIK--------RIGL 121
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLIPALDALNRKDV-EGARNLLRIA 277
L + FY +L E ++P ++ T H +I L+ L+R + E +R L
Sbjct: 122 LGTKQTMEQDFYTSRLAKYNIETIIPNDEERTFIHHVI--LNELSRGIISETSREKLIQI 179
Query: 278 LQVLLVRAVNTVILASDDMQDLLPPDD 304
L+ ++L ++ L+ +D
Sbjct: 180 TNSLIQNGAEGILLGCTEIPLLISQND 206
>gi|187919407|ref|YP_001888438.1| aspartate racemase [Burkholderia phytofirmans PsJN]
gi|187717845|gb|ACD19068.1| aspartate racemase [Burkholderia phytofirmans PsJN]
Length = 233
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 30/218 (13%)
Query: 83 VGIVGGASVDSTLNLLGKLVQL---SGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+GI+GG +T++ + K+VQL S ++ P L+ + P + DRS
Sbjct: 4 IGILGGMGPLATVDFMAKVVQLTDASCDQQHLPMLVANLPHIP------DRSR------- 50
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE-CV 198
+ D + L L + G I +PC+ +H W+ ++ + P LH++E CV
Sbjct: 51 --AILGDGEDCLGPLLEGIDLLNRNGVGLIAIPCNSAHHWYAQIAARSAAPVLHIAEACV 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPA 258
A A R+ VL L +GFYQ L E ++P A ++ ++
Sbjct: 109 AAVPASAR----------RVAVLGTGGTLKSGFYQAALSARDIEPLVPG-ADLQQSIATC 157
Query: 259 LDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
+ + +E A L L L + V ++A ++
Sbjct: 158 IREVKAGALEQAAGHLSTVLGALAAQDVRAAVMACTEI 195
>gi|229147323|ref|ZP_04275673.1| amino-acid racemase [Bacillus cereus BDRD-ST24]
gi|228636155|gb|EEK92635.1| amino-acid racemase [Bacillus cereus BDRD-ST24]
Length = 225
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 19/171 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE GA I MPC+ +H++ +E+ + S+P L++ + + + E N K R+ +
Sbjct: 70 LESTGASFIAMPCNTAHLYFEELQRSLSIPILNIVDETLQSIPE-NTK--------RVAL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDK-ATMEHTLIPALDALNRKDVEGARNLLRIALQ 279
LA A + AG YQ+ + E + +K TM + +I + + +VE AR L AL
Sbjct: 121 LATEATVQAGIYQDGIAKRNIEYIHYEKWQTMINQIITYIKS---GEVENARKLWS-ALV 176
Query: 280 VLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIKWVKSAEK 330
V L V+T I+A D+ + ++ +D LA++ ++ S K
Sbjct: 177 VQLKDEVDTAIIACTDLNVVAASEN-----FVDSSQCLAKAVVRMYLSNTK 222
>gi|449990103|ref|ZP_21821346.1| putative amino acid recemase [Streptococcus mutans NVAB]
gi|449182106|gb|EMB84152.1| putative amino acid recemase [Streptococcus mutans NVAB]
Length = 233
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 23/175 (13%)
Query: 77 LNQANTVGIVGGASVDSTLNLLGKLVQLSGE--ENDFPFLLCSDPLLNKELLSHDRSSFS 134
+N T+G++GG S +ST + QL E + + L + LL S D +
Sbjct: 1 MNTMKTIGLIGGMSWESTTSYY----QLINETIKKELGGLHSAKILL----YSVDFAEIE 52
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
G D + E L + LE+AGA IV+ + H ++ K ++P LH+
Sbjct: 53 HYQASG-----DWAKSAEVLSQIAQKLEQAGADFIVICTNTMHKVAPQIQKQIAIPILHI 107
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
++ A+ L E ++ ++G+L +T FY+EKL G EV++PD+A
Sbjct: 108 AQATAEALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQA 154
>gi|91784270|ref|YP_559476.1| aspartate racemase [Burkholderia xenovorans LB400]
gi|91688224|gb|ABE31424.1| Aspartate racemase [Burkholderia xenovorans LB400]
Length = 232
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 108/257 (42%), Gaps = 34/257 (13%)
Query: 81 NTVGIVGGASVDST------LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFS 134
T+G++GG S +S+ LN K +L G N +L D + L +
Sbjct: 2 KTIGVIGGMSWESSTEYYRLLNRHAK-ARLGGHHNARSLMLTVDFAPVEAL--QRAGDWD 58
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
+L G Q+ D+ R+ LE+ GA +++ + H ++ + VPFLH+
Sbjct: 59 AL-----GRQMADAA------RQ---LERGGADLVMLATNTMHRVYESIEAAIDVPFLHI 104
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEH 253
++ L+ A ++ R+G+L + FY +L+ G ++PD+A
Sbjct: 105 ADPTGNALRAAGVE--------RVGLLGTRYTMEQTFYTGRLRERYGLTTLVPDEAERAD 156
Query: 254 TLIPALDALNRKDVEGA-RNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCID 312
D L V GA R + + ++ L R VIL ++ L+ P+D L D
Sbjct: 157 VHRIIYDELCHGKVNGASRAVYQRVIEALAARGAQAVILGCTEITLLIKPEDSAL-PVFD 215
Query: 313 PMDALARSTIKWVKSAE 329
A++ ++W E
Sbjct: 216 TTALHAQAAVEWAIGVE 232
>gi|42779389|ref|NP_976636.1| aspartate racemase [Bacillus cereus ATCC 10987]
gi|42735305|gb|AAS39244.1| aspartate racemase [Bacillus cereus ATCC 10987]
Length = 234
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 111/248 (44%), Gaps = 25/248 (10%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
VGI+GG +T++L+ K++ + D + +++ + S G
Sbjct: 5 VGIIGGMGPLATVDLMNKIISYTPAMKDQDHI---------HIIADNYSQIPDRTTAILG 55
Query: 143 VQLDDS-LIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
+D + IV++ +R L+ AGA +V+ C+ +H ++ V + ++P LH+ A+
Sbjct: 56 KGIDPTPYIVQSAQR----LQNAGADFLVIACNTAHFFYKAVKRSVNIPILHMPLETARF 111
Query: 202 LKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDA 261
++E N + ++G+LA + + A YQ Q +V+ PDK M+ ++ + A
Sbjct: 112 VQENNFR--------KVGLLATDGTVKAELYQNSCQDYRIDVIDPDKE-MQKKVMEGIYA 162
Query: 262 LNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARST 321
+ D++ L + L +I ++ +L + + IDP + +A+
Sbjct: 163 IKSGDLKTGCLHLSMVADKLKESGAEAIIAGCTEVPLVLKSSENIC--VIDPTEIVAKVV 220
Query: 322 IKWVKSAE 329
IK E
Sbjct: 221 IKIANKTE 228
>gi|255632384|gb|ACU16542.1| unknown [Glycine max]
Length = 58
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 31/43 (72%)
Query: 171 MPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAG 213
MPCHLSH WH E+ + S+PFLH +CVA ELK A +KP+ A
Sbjct: 1 MPCHLSHAWHSEISEDSSLPFLHDGDCVAMELKNAMLKPIHAA 43
>gi|163759130|ref|ZP_02166216.1| Aspartate racemase [Hoeflea phototrophica DFL-43]
gi|162283534|gb|EDQ33819.1| Aspartate racemase [Hoeflea phototrophica DFL-43]
Length = 233
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 108/238 (45%), Gaps = 45/238 (18%)
Query: 81 NTVGIVGGASVDST---LNLLGKLVQ--LSGEENDFPFLLCSDPLLNKELLSHDRSSFSS 135
T+GI+GG S +ST LL ++V+ L G L +D LL S D + +
Sbjct: 2 KTIGILGGMSWESTTTYYQLLNQMVRARLGG-------LHSADILLR----SFDFAPIAE 50
Query: 136 LNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195
L +G E + + LEKAGA C+++ + HI D V SVP LH++
Sbjct: 51 LQSEGNWAH-----AAEVMTEAAIALEKAGAGCLLIGTNTMHICADAVQAALSVPLLHIA 105
Query: 196 ECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATME-- 252
+ A ++ + K SPL +LA + FY+ +L + G +V +PD +
Sbjct: 106 DVTAASIQASGSK-----SPL---LLATRFTMEKDFYKGRLSDKHGIKVQIPDAVERQDV 157
Query: 253 HTLI------PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
H++I A+ A++R AR L IA R + VI ++ L+ P+D
Sbjct: 158 HSIIYEELCQGAISAVSR-----ARYLDIIA--AAKARGADGVIFGCTEVGLLISPED 208
>gi|389575022|ref|ZP_10165072.1| aspartate racemase [Bacillus sp. M 2-6]
gi|388425077|gb|EIL82912.1| aspartate racemase [Bacillus sp. M 2-6]
Length = 232
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 117/254 (46%), Gaps = 29/254 (11%)
Query: 80 ANTVGIVGGASVDSTLNLLGKLVQLS---GEENDFPFLLCSDPLLNKELLSHDRSSFSSL 136
+ T+GI+GG +T++L+ K++ + +++ + +DP + DR+
Sbjct: 2 STTIGIMGGMGPLATIDLMKKIISHTPAIKDQDHLHVIADNDPQIP------DRT----- 50
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
N G + ++ + +R LE+AGA I++ C+ +H + + V + +P +++
Sbjct: 51 NAIFGKGEDPTEYMIASAKR----LERAGADFILIACNTAHFFLENVQQSTHIPIMNMPL 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
AK LK+ + +G+L + L YQ+ H +V+ P + T++ ++
Sbjct: 107 ETAKHLKKHHYT--------SVGLLCTDGTLKTQLYQKACAHHKIDVMTPSE-TLQKNVM 157
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDA 316
+ A+ + + L +A ++L+ + +I ++ +L + K IDP
Sbjct: 158 NGIYAVKAGKLSKGESELALAAEILINQGAEAIIAGCTEIPLVLRSTKAV--KVIDPTVI 215
Query: 317 LARSTIKWVKSAEK 330
LA+ +K V EK
Sbjct: 216 LAKEAVKLVYELEK 229
>gi|186474121|ref|YP_001861463.1| aspartate racemase [Burkholderia phymatum STM815]
gi|184196453|gb|ACC74417.1| aspartate racemase [Burkholderia phymatum STM815]
Length = 487
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 122/273 (44%), Gaps = 53/273 (19%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLS---GEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+G+VGG +T + + K+V+ + +++ ++ +P + DR+ L K
Sbjct: 227 LGVVGGVGPAATADFMHKVVRNTPAVRDQDHIKVIVEQNPQIP------DRTD--CLTGK 278
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G D +L + RK LE GA I +PC+ +H + + +P +++ A
Sbjct: 279 GP----DPTLALYATCRK---LEDGGANLIAIPCNTAHAFIAPIEARLRIPIVNMMSVTA 331
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
L+ S LRIG+LA + + +G Y+E L+ G VLP PA+
Sbjct: 332 DFLRATFP------SVLRIGLLATDGTIASGVYREALEARGLAEVLPP---------PAM 376
Query: 260 DALNRKDVEGARNL------------LRIALQVLLVRAVNTVILASDDMQDLLPPDDPLL 307
A + GAR + + A++ LL++ V ++LA ++ L P +
Sbjct: 377 QARVTNAIYGARGVKAGFTSGECVDDIIAAVESLLLQQVEIILLACTELPLLFPQAITVT 436
Query: 308 K-----KCIDPMDALARSTIKWVKS---AEKGT 332
+ + +DP D LA+S +++ + AE+ T
Sbjct: 437 RHGRTAQFVDPADVLAKSCVEFARGKPLAERKT 469
>gi|374308015|ref|YP_005054446.1| aspartate racemase [Filifactor alocis ATCC 35896]
gi|291165619|gb|EFE27668.1| aspartate racemase [Filifactor alocis ATCC 35896]
Length = 233
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 86/176 (48%), Gaps = 25/176 (14%)
Query: 77 LNQANTVGIVGGASVDSTLNLLGKLVQL---SGEENDFPFLLCSDPLLNKELLSHDRSSF 133
+ +G++GG +T++ K+V+ S ++ P ++ + + DR+++
Sbjct: 1 MKHKKKMGVIGGMGPLATMDFATKVVRFTEASCDQEHIPMII------DNRIQIPDRTNY 54
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
LN G L + L FLE++GA +VMPC+ +H ++DE+ K +PFLH
Sbjct: 55 I-LN--GTNSPLSE------LIASATFLEESGAEFLVMPCNTAHYFYDEIKKHIHIPFLH 105
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKL-QHEGFEVVLPDK 248
+ E KE+ + + ++ +++ + G YQ+ + + +++LPD+
Sbjct: 106 IVEETTKEILK------HKDTVHKVALISTTGTYSCGLYQDAFAKQKDVDLLLPDE 155
>gi|430758154|ref|YP_007208053.1| Amino acid racemase [Bacillus subtilis subsp. subtilis str. BSP1]
gi|430022674|gb|AGA23280.1| Amino acid racemase [Bacillus subtilis subsp. subtilis str. BSP1]
Length = 227
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 37/174 (21%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + K++ +L G ND +P ++ C P + HD
Sbjct: 2 IGILAGMGPKSTSPFIDKVIDYCQKLYGASNDIDYPHMMIYSCPTPFYADRPIDHDEMKK 61
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
+ ++ G V+L EK G I +PC+ +H++++E+ + SVP LH
Sbjct: 62 AIID---GAVKL----------------EKTGVDFIALPCNTAHVYYEEIQQALSVPMLH 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD 247
+ E KE+ K + VL + + YQ+ L+ G EVV D
Sbjct: 103 IVEETIKEIPHPAKKAV---------VLGTEPTIQSAIYQKVLKANGQEVVHKD 147
>gi|346983359|emb|CCD10846.1| RacX protein [Bacillus subtilis]
Length = 227
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 109/253 (43%), Gaps = 48/253 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + K++ +L G ND +P ++ C P + HD
Sbjct: 2 IGILAGMGPKSTSPFIDKVIDYCQKLYGASNDIDYPHMMIYSCPTPFYADRPIDHDEMKK 61
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
+ ++ G V+L EK G I +PC+ +H++++E+ + SVP LH
Sbjct: 62 AIID---GAVKL----------------EKTGVDFIALPCNTAHVYYEEIQQALSVPMLH 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDK-ATME 252
+ E KE+ K + VL + + YQ+ L+ G EVV D +
Sbjct: 103 IVEETIKEIPHPAKKAV---------VLGTEPTIQSAIYQKVLKANGQEVVHKDHWQQVV 153
Query: 253 HTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQ---DLLPPDDPLLKK 309
+ LI A+ N +E + L + + + A + +I A D+ D + + P+
Sbjct: 154 NQLIAAIKQPNH--MEHTQALWQTLYEEISQHA-DIIISACTDLNAVLDHIQSEIPI--- 207
Query: 310 CIDPMDALARSTI 322
ID LA+ST+
Sbjct: 208 -IDSSACLAKSTV 219
>gi|227329729|ref|ZP_03833753.1| putative aspartate/glutamate racemase [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 236
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 106/232 (45%), Gaps = 31/232 (13%)
Query: 80 ANTVGIVGGASVDSTL---NLLGKLV--QLSGEENDFPFLLCSDPLLNKELLSHDRSSFS 134
+ T+G++GG S +ST+ ++ + V QL G L S ++ L S D
Sbjct: 3 SKTLGLIGGMSWESTIPYYRIINEYVKSQLGG--------LHSAKII---LHSVDFHEIE 51
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
L +G Q + ++ N+ V L +AGA IV+ + H D+V + C +P LH+
Sbjct: 52 RLQSQGDWEQ--SAAVLSNIA---VGLRQAGAEAIVICTNTMHKVADDVERACQLPLLHI 106
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEH 253
++ LK+ +K ++G+L + FY++++Q G EV++PD E
Sbjct: 107 ADATGTSLKQHGLK--------KVGLLGTRYTMEQDFYRQRIQERFGVEVMVPDHEGKEA 158
Query: 254 TLIPALDALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
D L ++ + +R + R +Q L + +IL ++ L+ D
Sbjct: 159 VNRIIYDELCLGNINDASRQIYRDIIQQLEQQGAEGIILGCTEIPLLISAQD 210
>gi|115360958|ref|YP_778095.1| aspartate racemase [Burkholderia ambifaria AMMD]
gi|115286286|gb|ABI91761.1| aspartate racemase [Burkholderia ambifaria AMMD]
Length = 484
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 113/266 (42%), Gaps = 50/266 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLVQ---LSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+G+VGG +T++ L K+V+ S +++ L+ +P + DR+ N
Sbjct: 248 IGVVGGVGPAATVDFLDKIVRNTPASRDQDHIKLLVEQNPQIP------DRTE----NLV 297
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G G SL + LE A I +PC+ +H + + + +P +++
Sbjct: 298 GAGADPTISLYATCKK-----LEDGDADIIAIPCNTAHAFVERIQPWLRIPIVNMLSVTV 352
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
L++ E +GVLA + + +G Y++ L+ +G V P PAL
Sbjct: 353 AHLRDTYPALQE------VGVLATSGTIESGVYRKALESQGLRQVAP---------APAL 397
Query: 260 DALNRKDVEGARNL------------LRIALQVLLVRAVNTVILASDDMQDLLPPDDPLL 307
A + + GA+ + + A+ L+ V+ ++L ++ LLP D+ +
Sbjct: 398 QARVMEAIYGAQGVKAGFTTGQCEEDIGAAIDALMDEGVSVIVLGCTELPILLPGDEYVG 457
Query: 308 KK-----CIDPMDALARSTIKWVKSA 328
+ +DP D LAR+ I +A
Sbjct: 458 RNGRRATLVDPTDVLARTCIAHAMAA 483
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 17/166 (10%)
Query: 133 FSSLNCKGGG----VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCS 188
F KG G ++ L V +L R EK G +V+PC LSH + DE+
Sbjct: 47 FEQYPFKGAGSGSAATIERKLYVFDLIRA---FEKRGVTTVVLPCFLSHTFIDELKANTR 103
Query: 189 VPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP-- 246
+P + + E V ++ + RIGVLA + + ++ FEVV P
Sbjct: 104 LPIVDIVEAVRSHVRR------KYPDATRIGVLASDYVRGKRLFEAYFPTPQFEVVHPRP 157
Query: 247 -DKATMEHTLIPALDALNRKDVEG-ARNLLRIALQVLLVRAVNTVI 290
D + I D + R ++ G LLR A + L + V ++
Sbjct: 158 CDGIDLVTEAIYGADGIKRGNLRGRPVELLRRACEDLADQGVQVIV 203
>gi|187924576|ref|YP_001896218.1| aspartate racemase [Burkholderia phytofirmans PsJN]
gi|187715770|gb|ACD16994.1| aspartate racemase [Burkholderia phytofirmans PsJN]
Length = 232
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 108/258 (41%), Gaps = 38/258 (14%)
Query: 82 TVGIVGGASVDST------LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSS 135
T+G++GG S +S+ LN K +L G N +L D F+
Sbjct: 3 TIGVIGGMSWESSTEYYKLLNRHAK-ARLGGHHNARSLMLTLD--------------FAP 47
Query: 136 L--NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
+ N + G D + + + + LE+ GA +++ + H ++ + VPFLH
Sbjct: 48 IEANQRAG----DWTALGQQMADAARQLERGGADLVMLATNTMHRVYESIEAAIDVPFLH 103
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATME 252
+++ L+ A ++ R+G+L + FY +L+ G E V+PD+A
Sbjct: 104 IADPTGSALRAAGIE--------RVGLLGTRYTMEQTFYTGRLRERYGLETVIPDEAERA 155
Query: 253 HTLIPALDALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCI 311
D L +V + +R + + ++ L R VIL ++ L+ +D L
Sbjct: 156 DVHRIIYDELCHGNVNDASRAVYQRVIEALAARGAQAVILGCTEITLLIKAEDSAL-PVF 214
Query: 312 DPMDALARSTIKWVKSAE 329
D A++ ++W E
Sbjct: 215 DTTALHAQAAVEWAIDGE 232
>gi|384177067|ref|YP_005558452.1| putative amino acid racemase [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|349596291|gb|AEP92478.1| putative amino acid racemase [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
Length = 227
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 107/253 (42%), Gaps = 48/253 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + K++ +L G ND +P ++ C P + HD
Sbjct: 2 IGILAGMGPKSTSPFIDKVIDYCQKLYGASNDIDYPHMMIYSCQTPFYADRPIDHDEMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I++ + R LEK G I +PC+ +H++++E+ + +VP LH
Sbjct: 61 --------------KAIIDGVAR----LEKTGVDFIALPCNTAHVYYEEIQQALTVPMLH 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME- 252
+ E KE+ K + VL + + YQ+ L+ G EVV D
Sbjct: 103 IVEETIKEIPHPAKKAV---------VLGTEPTIQSAIYQKVLKANGKEVVHKDHWQQAV 153
Query: 253 HTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQ---DLLPPDDPLLKK 309
+ LI A+ N +E + L + + + A + +I A D+ D + + P+
Sbjct: 154 NQLIAAIKQPNH--MEHTQALWQTLYEEISQHA-DIIISACTDLNAVLDHIQSEIPI--- 207
Query: 310 CIDPMDALARSTI 322
ID LA+ST+
Sbjct: 208 -IDSSACLAKSTV 219
>gi|52142858|ref|YP_083972.1| aspartate racemase [Bacillus cereus E33L]
gi|51976327|gb|AAU17877.1| aspartate racemase [Bacillus cereus E33L]
Length = 226
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV S+P LH+ + AKE+ E ++K RIG+
Sbjct: 69 VEKSGAECLLMCSNTVHLFAEEVESAISIPLLHIGDVSAKEMVEQDIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDK 248
L + FY+ +L + E ++P++
Sbjct: 121 LGTKQTMEQDFYKSRLANYNIETIIPNE 148
>gi|423510681|ref|ZP_17487212.1| aspartate racemase [Bacillus cereus HuA2-1]
gi|402453634|gb|EJV85434.1| aspartate racemase [Bacillus cereus HuA2-1]
Length = 227
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+E +GA C++M + H++ +EV + S+P LH+ + AKE+ E N+K RIG+
Sbjct: 70 VENSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMVEQNIK--------RIGL 121
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLIPALDALNR 264
L + FY +L E ++P ++ T H +I L+ L+R
Sbjct: 122 LGTKQTMEQDFYTSRLAKYNIETIIPNDEERTFIHHVI--LNELSR 165
>gi|390570670|ref|ZP_10250930.1| aspartate racemase [Burkholderia terrae BS001]
gi|420252331|ref|ZP_14755461.1| aspartate racemase [Burkholderia sp. BT03]
gi|389937368|gb|EIM99236.1| aspartate racemase [Burkholderia terrae BS001]
gi|398055584|gb|EJL47646.1| aspartate racemase [Burkholderia sp. BT03]
Length = 234
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 110/257 (42%), Gaps = 34/257 (13%)
Query: 82 TVGIVGGASVDST------LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSS 135
T+G++GG S +S+ LN K +L G N ++ D + ++ +
Sbjct: 3 TIGVIGGMSWESSAEYYRLLNRYAK-ARLGGHHNARSLMVTVD-------FAPVEANQRA 54
Query: 136 LNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195
+ GVQ+ D+ R+ LE+ GA +++ + H H+ + +VPFLH++
Sbjct: 55 GDWHALGVQMADAA------RQ---LERGGADIVLLATNTMHRVHEAIEAAIAVPFLHIA 105
Query: 196 ECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEHT 254
+ + L+ A ++ R+G+L + FY +L+ G + ++PD H
Sbjct: 106 DPTGEALRAAGIE--------RVGLLGTRYTMEQTFYAGRLRERFGLDTLIPDDEGRAHV 157
Query: 255 LIPALDALNRKDVE-GARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDP 313
D L ++E +R + + ++ L R VIL ++ L+ +D L D
Sbjct: 158 HRIIYDELCHGNIEPSSRAIYQNVIEDLKARGAQAVILGCTEITLLIRQEDSAL-PVFDT 216
Query: 314 MDALARSTIKWVKSAEK 330
A+ + W ++
Sbjct: 217 TALHAQKAVDWAIETDR 233
>gi|163940450|ref|YP_001645334.1| aspartate racemase [Bacillus weihenstephanensis KBAB4]
gi|163862647|gb|ABY43706.1| aspartate racemase [Bacillus weihenstephanensis KBAB4]
Length = 227
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+E +GA C++M + H++ +EV + S+P LH+ + AKE+ E N+K RIG+
Sbjct: 70 VENSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMVEQNIK--------RIGL 121
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLIPALDALNR 264
L + FY +L E ++P ++ T H +I L+ L+R
Sbjct: 122 LGTKQTMEQDFYTSRLAKYNIETIIPNDEERTFIHHVI--LNELSR 165
>gi|421676137|ref|ZP_16116049.1| aspartate racemase [Acinetobacter baumannii OIFC065]
gi|421691586|ref|ZP_16131245.1| aspartate racemase [Acinetobacter baumannii IS-116]
gi|404562195|gb|EKA67419.1| aspartate racemase [Acinetobacter baumannii IS-116]
gi|410380433|gb|EKP33019.1| aspartate racemase [Acinetobacter baumannii OIFC065]
Length = 242
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 27/180 (15%)
Query: 82 TVGIVGGASVDST---LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG S +ST + + VQ N L + +LN S D ++L
Sbjct: 3 TIGLLGGMSWESTALYYQQINRTVQ-----NKLGKLHSAKIILN----SVDFEEIAALQA 53
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
KG Q + + E + LEKAGA CI++ + H ++ +VPF+H+++
Sbjct: 54 KGLW-QEAGAYLAEQAQN----LEKAGADCILVCTNTMHKVAPQIEDAITVPFIHIADAT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME--HTLI 256
AKE+ N++ ++ +L + FY+ +LQ G EV++P+ A + H++I
Sbjct: 109 AKEILSQNIR--------KVALLGTAFTMEQDFYKARLQDLGIEVIIPNDANRKIVHSII 160
>gi|229017933|ref|ZP_04174811.1| Aspartate racemase [Bacillus cereus AH1273]
gi|229024154|ref|ZP_04180621.1| Aspartate racemase [Bacillus cereus AH1272]
gi|423391052|ref|ZP_17368278.1| aspartate racemase [Bacillus cereus BAG1X1-3]
gi|228737150|gb|EEL87678.1| Aspartate racemase [Bacillus cereus AH1272]
gi|228743358|gb|EEL93480.1| Aspartate racemase [Bacillus cereus AH1273]
gi|401636885|gb|EJS54638.1| aspartate racemase [Bacillus cereus BAG1X1-3]
Length = 227
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+E +GA C++M + H++ +EV + S+P LH+ + AKE+ E N+K RIG+
Sbjct: 70 VENSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMVEQNIK--------RIGL 121
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLIPALDALNR 264
L + FY +L E ++P ++ T H +I L+ L+R
Sbjct: 122 LGTKQTMEQDFYTSRLAKYNIETIIPNDEERTFIHHVI--LNELSR 165
>gi|406573470|ref|ZP_11049220.1| aspartate racemase [Janibacter hoylei PVAS-1]
gi|404557066|gb|EKA62518.1| aspartate racemase [Janibacter hoylei PVAS-1]
Length = 222
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 19/150 (12%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
L GA I++ + H D + +PF H++E A+ + A+ + R+G+
Sbjct: 62 LRAGGAEGILLAANTMHAVADRISADLDIPFFHIAEATAERVAGAHQR--------RVGL 113
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDV------EGARNLL 274
LA + FY + G +VVLPD A P +D + +++ + +R L
Sbjct: 114 LATATTMGGDFYTTPFERRGIDVVLPDPADR-----PEVDRMIYEELVPGIIKDSSRKEL 168
Query: 275 RIALQVLLVRAVNTVILASDDMQDLLPPDD 304
R +Q + R V+LA ++ LL DD
Sbjct: 169 RRIMQGMADRGAEGVVLAGTELGLLLEEDD 198
>gi|399009616|ref|ZP_10712041.1| aspartate racemase [Pseudomonas sp. GM17]
gi|398111361|gb|EJM01248.1| aspartate racemase [Pseudomonas sp. GM17]
Length = 233
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 110/250 (44%), Gaps = 31/250 (12%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNC-- 138
T+G++GG S +S+ +L+ + PL + LL + F +
Sbjct: 2 RTIGLIGGMSWESSAEYY-RLINQQVRDR-------LGPLRSARLLMYS-VDFGPVEQAQ 52
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
G L ++V+ RR LE GA C+V+ + H DE+ SVPFLH+++
Sbjct: 53 HAGRWDLAAGILVDAARR----LEAGGAECVVLCTNTMHKVADEIQAVLSVPFLHIADPT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPA 258
A+ LEAG+ L +G+L + F +++L G +V++PD +
Sbjct: 109 AE-------AALEAGT-LSVGLLGTAFTMEQDFLKQRLVDRGLKVLVPDATDRQAVHRII 160
Query: 259 LDALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD---PLLKKCIDPM 314
D L + E +R + +Q L+ R +IL ++ LL P+ PLL D
Sbjct: 161 YDELCVGVISEASRQRYQQVIQALMERGAQAIILGCTEIGLLLKPEHSPLPLL----DTT 216
Query: 315 DALARSTIKW 324
+ AR+ + +
Sbjct: 217 ELHARAAVAF 226
>gi|48477221|ref|YP_022927.1| aspartate racemase [Picrophilus torridus DSM 9790]
gi|48429869|gb|AAT42734.1| aspartate racemase [Picrophilus torridus DSM 9790]
Length = 232
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 28/169 (16%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
VGI+GG +T+ + KL ++ E D ++L +DP + + ++ + S +N
Sbjct: 5 VGIIGGMGPVATVKFIEKLTSMTDAEIDQDHVRYVLYNDPEIPDRIEAYFENMESPVNAI 64
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G++ +LE G I M C+ +HIW E + FL++ + A
Sbjct: 65 NNGIK---------------YLESIGIDTIGMACNTAHIWFKEFVYKSN--FLNMIDLTA 107
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDK 248
LK++ K + +L+ NA +++G Y KL+ V+PD+
Sbjct: 108 SVLKKSGFK--------NVLLLSTNATVSSGIYTGKLRDYNINTVIPDQ 148
>gi|307729191|ref|YP_003906415.1| aspartate racemase [Burkholderia sp. CCGE1003]
gi|307583726|gb|ADN57124.1| aspartate racemase [Burkholderia sp. CCGE1003]
Length = 232
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 111/257 (43%), Gaps = 34/257 (13%)
Query: 81 NTVGIVGGASVDST------LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFS 134
T+G++GG S +S+ LN K +L G N +L D + +
Sbjct: 2 KTIGVIGGMSWESSAEYYRLLNRHAK-ARLGGHHNARSLMLTVD-------FARVEADQR 53
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
+ + G Q+ D+ R+ LE+ GA+ +++ + H ++ + + VPFLH+
Sbjct: 54 AGHWDALGEQMADAA------RQ---LERGGAQLVMLATNTMHRVYESIERAIHVPFLHI 104
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEH 253
++ L+ A ++ R+G+L + FY +L+ G + + PD+A
Sbjct: 105 ADPTGSALRAAGVE--------RVGLLGTRYTMEQTFYTGRLRERYGLDTLAPDEADRAD 156
Query: 254 TLIPALDALNRKDVE-GARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCID 312
D L DV+ +R + + ++ L R VIL ++ L+ P+ +L D
Sbjct: 157 VHRIIYDELCHGDVKRESREVYQGVIESLRERGAQAVILGCTEITLLIKPEHSVL-PVFD 215
Query: 313 PMDALARSTIKWVKSAE 329
A++ ++W AE
Sbjct: 216 TTALHAQAAVEWAIEAE 232
>gi|229133473|ref|ZP_04262300.1| Aspartate racemase [Bacillus cereus BDRD-ST196]
gi|423668351|ref|ZP_17643380.1| aspartate racemase [Bacillus cereus VDM034]
gi|423675520|ref|ZP_17650459.1| aspartate racemase [Bacillus cereus VDM062]
gi|228649873|gb|EEL05881.1| Aspartate racemase [Bacillus cereus BDRD-ST196]
gi|401302342|gb|EJS07922.1| aspartate racemase [Bacillus cereus VDM034]
gi|401308544|gb|EJS13939.1| aspartate racemase [Bacillus cereus VDM062]
Length = 227
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+E +GA C++M + H++ +EV + S+P LH+ + AKE+ E N+K RIG+
Sbjct: 70 VENSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMVEQNIK--------RIGL 121
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLIPALDALNR 264
L + FY +L E ++P ++ T H +I L+ L+R
Sbjct: 122 LGTKQTMEEDFYTSRLAKYNIETIIPNDEERTFIHHVI--LNELSR 165
>gi|229193040|ref|ZP_04319996.1| amino-acid racemase [Bacillus cereus ATCC 10876]
gi|228590487|gb|EEK48350.1| amino-acid racemase [Bacillus cereus ATCC 10876]
Length = 224
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 108/251 (43%), Gaps = 48/251 (19%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I MPC+ +H++ E+ + S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGASFIAMPCNTAHLYFKELQRSLSIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDK-ATME 252
+ + K + E + R+ +LA A + AG YQ+ + E + +K TM
Sbjct: 103 IVDETLKAIPE---------TAKRVALLATEATVQAGIYQDGIAKRNIEYIHYEKWQTMI 153
Query: 253 HTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCID 312
+ +I + + +VE AR L AL V L V+T I+A D+ + D +D
Sbjct: 154 NQIITYIKS---GEVEEARKLWS-ALVVQLKDEVDTAIIACTDLNVVASED------FVD 203
Query: 313 PMDALARSTIK 323
LA++ ++
Sbjct: 204 SSQCLAKAVVR 214
>gi|172065222|ref|YP_001815934.1| aspartate racemase [Burkholderia ambifaria MC40-6]
gi|171997464|gb|ACB68381.1| aspartate racemase [Burkholderia ambifaria MC40-6]
Length = 489
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 118/284 (41%), Gaps = 60/284 (21%)
Query: 65 GSKAAPFCSDALLNQANTVGIVGGASVDSTLNLLGKLVQ---LSGEENDFPFLLCSDPLL 121
GS+AA F +G+VGG +T++ L K+V+ S +++ L+ +P +
Sbjct: 240 GSRAATF----------KIGVVGGVGPAATVDFLDKIVRNTPASRDQDHIKLLVEQNPQI 289
Query: 122 NKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHD 181
DR+ N G G SL + LE A I +PC+ +H + +
Sbjct: 290 P------DRTE----NLVGAGADPTISLYATCKK-----LEDGDADVIAIPCNTAHAFVE 334
Query: 182 EVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGF 241
+ +P +++ L++ E +GVLA + + +G Y++ L+ +G
Sbjct: 335 RIQPWLGIPIVNMLSVTVAHLRDTYPALRE------VGVLATSGTVESGVYRKALESQGL 388
Query: 242 EVVLPDKATMEHTLIPALDALNRKDVEGARNL------------LRIALQVLLVRAVNTV 289
V P PAL A + + G + + + A+ L+ V+ +
Sbjct: 389 RQVAP---------APALQARVMEAIYGPQGVKAGFTTGRCEEDIGAAIDALMDEGVSVI 439
Query: 290 ILASDDMQDLLPPDDPLLKK-----CIDPMDALARSTIKWVKSA 328
+L ++ LLP + + + +DP D LAR+ I + +A
Sbjct: 440 VLGCTELPILLPGGEYVARNGRRATLVDPTDVLARTCIGYAMAA 483
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 70/171 (40%), Gaps = 17/171 (9%)
Query: 128 HDRSSFSSLNCKGGG----VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEV 183
H F KG G ++ L V ++ R EK G +V+PC LSH + DE+
Sbjct: 42 HVEMIFEQYPFKGSGSGSAATIERKLYVFDMIRA---FEKRGVTTVVLPCFLSHTFIDEL 98
Query: 184 CKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEV 243
+P + + E V ++ + RIGVLA + + ++ F++
Sbjct: 99 KANTRLPIVDIVEAVRSHVRR------KYPDATRIGVLASDYVRDKRLFEAYFPTPQFDI 152
Query: 244 VL---PDKATMEHTLIPALDALNRKDVEG-ARNLLRIALQVLLVRAVNTVI 290
V PD + I D + R ++ G LLR A + L + V ++
Sbjct: 153 VHPRSPDGIDLVTEAIYGRDGIKRGNLRGRPVELLRRACEDLADQGVQVIV 203
>gi|397648851|ref|YP_006489378.1| amino acid recemase [Streptococcus mutans GS-5]
gi|392602420|gb|AFM80584.1| putative amino acid recemase [Streptococcus mutans GS-5]
Length = 229
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 23/171 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGE--ENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG S +ST + QL E + + L + LL S D +
Sbjct: 2 KTIGLIGGMSWESTTSYY----QLINETIKKELGGLHSAKILL----YSVDFAEIEHYQA 53
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
G D + E L + LEKAGA IV+ + H ++ K ++P LH+++
Sbjct: 54 SG-----DWAKSAEVLSQIAQKLEKAGADFIVICTNTMHKVAPQIQKQIAIPILHITQAT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
A+ L E ++ ++G+L +T FY+EKL G EV++PD+A
Sbjct: 109 AEALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQA 151
>gi|448671106|ref|ZP_21687098.1| aspartate racemase [Haloarcula amylolytica JCM 13557]
gi|445766188|gb|EMA17322.1| aspartate racemase [Haloarcula amylolytica JCM 13557]
Length = 234
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE AGA +VM + H ++ + SVPFLH+ + A+ ++ A ++ +GV
Sbjct: 71 LEAAGADFVVMATNTMHRVAPQLVEALSVPFLHIVDVAAEAIRAAGIET--------VGV 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
L + +++ FY ++ G E V+PD + E
Sbjct: 123 LGTDTVMSGAFYHDRFASHGIETVVPDPSARE 154
>gi|402554137|ref|YP_006595408.1| aspartate racemase [Bacillus cereus FRI-35]
gi|401795347|gb|AFQ09206.1| aspartate racemase [Bacillus cereus FRI-35]
Length = 234
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 110/249 (44%), Gaps = 25/249 (10%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
VGI+GG +T++L+ K++ + D + +++ + S G
Sbjct: 5 VGIIGGMGPLATVDLMNKIISYTPAMKDQEHI---------HIIADNYSQIPDRTTAILG 55
Query: 143 VQLDDS-LIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
+D + IV++ +R L+ AGA +V+ C+ +H ++ V + ++P LH+ A+
Sbjct: 56 KGIDPTPYIVQSAQR----LQNAGADFLVIACNTAHFFYKAVKRSVNIPILHMPLETARF 111
Query: 202 LKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDA 261
++E N + ++G+LA + + YQ Q +V+ PDK M+ ++ + A
Sbjct: 112 VQENNFR--------KVGLLATDGTVKTELYQNSCQDYRIDVIDPDKE-MQKKVMEGIYA 162
Query: 262 LNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARST 321
+ D++ L + L +I ++ +L + IDP + +A+
Sbjct: 163 IKSGDLKTGCLHLSMVADKLKESGAEAIIAGCTEVPLVLKSSKNIC--VIDPTEIVAKVV 220
Query: 322 IKWVKSAEK 330
IK EK
Sbjct: 221 IKIANKTEK 229
>gi|450106325|ref|ZP_21860449.1| putative amino acid recemase [Streptococcus mutans SF14]
gi|449223431|gb|EMC23120.1| putative amino acid recemase [Streptococcus mutans SF14]
Length = 229
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 23/171 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGE--ENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG S +ST + QL E + + L + LL S D +
Sbjct: 2 KTIGLIGGMSWESTTSYY----QLINETIKKELGGLHSAKILL----YSVDFAEIEHYQA 53
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
G D + E L + LEKAGA IV+ + H ++ K ++P LH+++
Sbjct: 54 SG-----DWAKSAEVLSQIAQKLEKAGADFIVICTNTMHKVAPQIQKQIAIPILHIAQAT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
A+ L E ++ ++G+L +T FY+EKL G EV++PD+A
Sbjct: 109 AEALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQA 151
>gi|229173304|ref|ZP_04300848.1| Aspartate racemase [Bacillus cereus MM3]
gi|228609998|gb|EEK67276.1| Aspartate racemase [Bacillus cereus MM3]
Length = 226
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 11/102 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV S+P LH+ + AKE+ E N+K RIG+
Sbjct: 69 VEKSGADCLLMCSNTIHLFAEEVENAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEHTLIPAL 259
L + FY+ +L + E ++P ++ + H ++ L
Sbjct: 121 LGTKQTMEQDFYKSRLANFNIETIIPTEEERNFIHHVILNEL 162
>gi|242398533|ref|YP_002993957.1| Aspartate racemase [Thermococcus sibiricus MM 739]
gi|242264926|gb|ACS89608.1| Aspartate racemase [Thermococcus sibiricus MM 739]
Length = 231
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 117/249 (46%), Gaps = 28/249 (11%)
Query: 78 NQANTVGIVGGASVDSTLNLLGKLVQLS--GEENDFPFLLCSDPLLNKELLSHDRSSFSS 135
+ +GI+GG +T++L ++V + ++ D P ++ + N ++ DR+++
Sbjct: 3 DMEKIIGILGGMGPLATVDLFRRIVMKTPAKKDQDHPRIIIYN---NSKV--PDRTAYIL 57
Query: 136 LNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195
K +L DS RK LEK GA I+MPC+ +H + +++ K ++P +++
Sbjct: 58 GRGKDPLPELLDSA------RK---LEKWGADFIIMPCNTAHFFAEDIQKAINIPLINMI 108
Query: 196 ECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTL 255
E A+ +K +K + G+LA + Y L G E+ +P++ + +
Sbjct: 109 EEAAEHIKNLGLK--------KAGLLATEGTVKGLVYHRALLKRGIEIAVPNEKDQKALM 160
Query: 256 IPALDALNRKDVE-GARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPM 314
+ + ++E G + +L +A + L + + +I ++ L +D IDPM
Sbjct: 161 DAIYEGIKAGNLEWGRQKMLEVAKK--LEKRCDGLIAGCTEVSVALRQED-FEVPFIDPM 217
Query: 315 DALARSTIK 323
D +A +K
Sbjct: 218 DVIAEKAVK 226
>gi|227114407|ref|ZP_03828063.1| putative aspartate/glutamate racemase [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 236
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 31/232 (13%)
Query: 80 ANTVGIVGGASVDSTL---NLLGKLV--QLSGEENDFPFLLCSDPLLNKELLSHDRSSFS 134
+ T+G++GG S +ST+ ++ + V QL G L S ++ L S D
Sbjct: 3 SKTLGLIGGMSWESTIPYYRIINEYVKSQLGG--------LHSAKII---LHSVDFHEIE 51
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
L +G Q + ++ N+ V L +AGA IV+ + H D+V C +P LH+
Sbjct: 52 RLQSQGDWEQ--SAAVLSNIA---VGLRQAGAEAIVICTNTMHKVADDVEHACQLPLLHI 106
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEH 253
++ LK+ +K ++G+L + FY++++Q G EV++PD E
Sbjct: 107 ADATGASLKQHGLK--------KVGLLGTRYTMEQDFYRQRIQERFGVEVIVPDHEGKEA 158
Query: 254 TLIPALDALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
D L ++ + +R + R +Q L + +IL ++ L+ D
Sbjct: 159 VNRIIYDELCLGNINDASRQIYRDIIQQLEQQGAEGIILGCTEIPLLISAQD 210
>gi|449975304|ref|ZP_21815750.1| putative amino acid recemase [Streptococcus mutans 11VS1]
gi|449177167|gb|EMB79481.1| putative amino acid recemase [Streptococcus mutans 11VS1]
Length = 233
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 23/175 (13%)
Query: 77 LNQANTVGIVGGASVDSTLNLLGKLVQLSGE--ENDFPFLLCSDPLLNKELLSHDRSSFS 134
+N T+G++GG S +ST + QL E + + L + LL S D +
Sbjct: 1 MNTMKTIGLIGGMSWESTTSYY----QLINETIKKELGGLHSAKILL----YSVDFAEIE 52
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
G D + E L + LE+AGA IV+ + H ++ K ++P LH+
Sbjct: 53 HYQANG-----DWAKSAEVLSQIAQKLEQAGADFIVICTNTMHKVAPQIQKQIAIPILHI 107
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
++ A+ + E ++ ++G+L +T FY+EKL G EV++PD+A
Sbjct: 108 AQATAEAILENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQA 154
>gi|423365557|ref|ZP_17342990.1| aspartate racemase [Bacillus cereus VD142]
gi|401090290|gb|EJP98449.1| aspartate racemase [Bacillus cereus VD142]
Length = 227
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+E +GA C++M + H++ +EV + S+P LH+ + AKE+ E N+K RIG+
Sbjct: 70 VEHSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMVEQNIK--------RIGL 121
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLIPALDALNR 264
L + FY +L E ++P ++ T H +I L+ L+R
Sbjct: 122 LGTKQTMEQDFYTSRLAKYNIETIIPNDEERTFIHHVI--LNELSR 165
>gi|170694718|ref|ZP_02885869.1| aspartate racemase [Burkholderia graminis C4D1M]
gi|170140349|gb|EDT08526.1| aspartate racemase [Burkholderia graminis C4D1M]
Length = 232
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 109/258 (42%), Gaps = 38/258 (14%)
Query: 82 TVGIVGGASVDST------LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSS 135
T+G++GG S +S+ LN K +L G N +L D F+
Sbjct: 3 TIGVIGGMSWESSAEYYRLLNRHAK-ARLGGHHNARSLMLTVD--------------FAP 47
Query: 136 L--NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
+ N + G D + E + LE+ GA +++ + H ++ + + VPFLH
Sbjct: 48 IEANQRAG----DWHALGEQMADAARQLERGGAGLVMLATNTMHRVYESIERAIHVPFLH 103
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATME 252
+++ L+ A ++ R+G+L + FY +L+ G E ++P++A
Sbjct: 104 IADPTGNALRAAGVE--------RVGLLGTRYTMEQAFYTGRLRERYGLETLVPEEAQRA 155
Query: 253 HTLIPALDALNRKDVEG-ARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCI 311
D L +V+ +R + + ++ L R VIL ++ L+ +D +L
Sbjct: 156 DVHRIIYDELCHGNVKSESRAIYQGVIESLAARGAQAVILGCTEITLLIKAEDSVL-PVF 214
Query: 312 DPMDALARSTIKWVKSAE 329
D A++ ++W E
Sbjct: 215 DTTALHAQAAVEWAIGGE 232
>gi|229011906|ref|ZP_04169086.1| Aspartate racemase [Bacillus mycoides DSM 2048]
gi|423487827|ref|ZP_17464509.1| aspartate racemase [Bacillus cereus BtB2-4]
gi|423493549|ref|ZP_17470193.1| aspartate racemase [Bacillus cereus CER057]
gi|423499659|ref|ZP_17476276.1| aspartate racemase [Bacillus cereus CER074]
gi|423662450|ref|ZP_17637619.1| aspartate racemase [Bacillus cereus VDM022]
gi|228749320|gb|EEL99165.1| Aspartate racemase [Bacillus mycoides DSM 2048]
gi|401153220|gb|EJQ60647.1| aspartate racemase [Bacillus cereus CER057]
gi|401156917|gb|EJQ64319.1| aspartate racemase [Bacillus cereus CER074]
gi|401298069|gb|EJS03674.1| aspartate racemase [Bacillus cereus VDM022]
gi|402435892|gb|EJV67925.1| aspartate racemase [Bacillus cereus BtB2-4]
Length = 227
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+E +GA C++M + H++ +EV + S+P LH+ + AKE+ E N+K RIG+
Sbjct: 70 VEHSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMVEQNIK--------RIGL 121
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLIPALDALNR 264
L + FY +L E ++P ++ T H +I L+ L+R
Sbjct: 122 LGTKQTMEEDFYTSRLAKYNIETIIPNDEERTFIHHVI--LNELSR 165
>gi|450098111|ref|ZP_21857832.1| putative amino acid recemase [Streptococcus mutans SF1]
gi|450171457|ref|ZP_21884004.1| putative amino acid recemase [Streptococcus mutans SM4]
gi|449221859|gb|EMC21611.1| putative amino acid recemase [Streptococcus mutans SF1]
gi|449244002|gb|EMC42396.1| putative amino acid recemase [Streptococcus mutans SM4]
Length = 233
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 19/173 (10%)
Query: 77 LNQANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSL 136
+N T+G++GG S +ST + + + +E L S +L L S D +
Sbjct: 1 MNTMKTIGLIGGMSWESTTSYYQFINETIKKELGG---LHSAKIL---LYSVDFAEIEHY 54
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
G D + E L + LE+AGA IV+ + H ++ K ++P LH+++
Sbjct: 55 QASG-----DWAKSAEVLSQIAQKLEQAGADFIVICTNTMHKVAPQIQKQIAIPILHIAQ 109
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
A+ L E ++ ++G+L +T FY+EKL G EV++PD+A
Sbjct: 110 ATAEALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQA 154
>gi|229060327|ref|ZP_04197693.1| Aspartate racemase [Bacillus cereus AH603]
gi|229167481|ref|ZP_04295219.1| Aspartate racemase [Bacillus cereus AH621]
gi|423593377|ref|ZP_17569408.1| aspartate racemase [Bacillus cereus VD048]
gi|228616043|gb|EEK73130.1| Aspartate racemase [Bacillus cereus AH621]
gi|228718917|gb|EEL70534.1| Aspartate racemase [Bacillus cereus AH603]
gi|401227043|gb|EJR33573.1| aspartate racemase [Bacillus cereus VD048]
Length = 227
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+E +GA C++M + H++ +EV + S+P LH+ + AKE+ E N+K RIG+
Sbjct: 70 VEHSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMVEQNIK--------RIGL 121
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLIPALDALNR 264
L + FY +L E ++P ++ T H +I L+ L+R
Sbjct: 122 LGTKQTMEEDFYTSRLAKYNIETIIPNDEERTFIHHVI--LNELSR 165
>gi|423517431|ref|ZP_17493912.1| aspartate racemase [Bacillus cereus HuA2-4]
gi|401163703|gb|EJQ71048.1| aspartate racemase [Bacillus cereus HuA2-4]
Length = 227
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+E +GA C++M + H++ +EV + S+P LH+ + AKE+ E N+K RIG+
Sbjct: 70 VEHSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMVEQNIK--------RIGL 121
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLIPALDALNR 264
L + FY +L E ++P ++ T H +I L+ L+R
Sbjct: 122 LGTKQTMEEDFYTSRLAKYNIETIIPNDEERTFIHHVI--LNELSR 165
>gi|170699320|ref|ZP_02890368.1| aspartate racemase [Burkholderia ambifaria IOP40-10]
gi|170135750|gb|EDT04030.1| aspartate racemase [Burkholderia ambifaria IOP40-10]
Length = 490
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 118/284 (41%), Gaps = 60/284 (21%)
Query: 65 GSKAAPFCSDALLNQANTVGIVGGASVDSTLNLLGKLVQ---LSGEENDFPFLLCSDPLL 121
GS+AA F +G+VGG +T++ L K+V+ S +++ L+ +P +
Sbjct: 241 GSRAATF----------KIGVVGGVGPAATVDFLDKIVRNTPASRDQDHIKLLVEQNPQI 290
Query: 122 NKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHD 181
DR+ N G G SL + LE A I +PC+ +H + +
Sbjct: 291 P------DRTE----NLVGAGADPTISLYATCKK-----LEDGDADVIAIPCNTAHAFVE 335
Query: 182 EVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGF 241
+ +P +++ L++ E +GVLA + + +G Y++ L+ +G
Sbjct: 336 RIQPWLGIPIVNMLTVTVAHLRDTYPALRE------VGVLATSGTIESGVYRKALESQGL 389
Query: 242 EVVLPDKATMEHTLIPALDALNRKDVEGARNL------------LRIALQVLLVRAVNTV 289
V P PAL A + + G+ + + A+ L+ V+ +
Sbjct: 390 RQVAP---------APALQARVMEAIYGSHGVKAGFTTGRCEEDIGAAIDALMDEGVSVI 440
Query: 290 ILASDDMQDLLPPDDPLLKK-----CIDPMDALARSTIKWVKSA 328
+L ++ LLP + + + +DP D LAR+ I + +A
Sbjct: 441 VLGCTELPILLPGGEYVGRNGRRATLVDPTDVLARTCIGYAMAA 484
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 13/155 (8%)
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G ++ L V ++ R EK G +V+PC LSH + DE+ +P + + E V
Sbjct: 59 GSAATIERKLYVFDMIRA---FEKRGVTTVVLPCFLSHTFIDELKANTRLPIVDIVEAVR 115
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEHTLI 256
++ + RIGVLA + + ++ F++V P D + I
Sbjct: 116 SHVRR------KYPDATRIGVLASDYVRDKRLFEAYFPAPQFDIVHPRSHDGIDLVTEAI 169
Query: 257 PALDALNRKDVEG-ARNLLRIALQVLLVRAVNTVI 290
D + R ++ G LLR A + L + V ++
Sbjct: 170 YGRDGIKRGNLRGRPVELLRRACEDLADQRVQVIV 204
>gi|423599992|ref|ZP_17575992.1| aspartate racemase [Bacillus cereus VD078]
gi|401234679|gb|EJR41157.1| aspartate racemase [Bacillus cereus VD078]
Length = 227
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+E +GA C++M + H++ +EV + S+P LH+ + AKE+ E N+K RIG+
Sbjct: 70 VEYSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAKEMVEQNIK--------RIGL 121
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLIPALDALNR 264
L + FY +L E ++P ++ T H +I L+ L+R
Sbjct: 122 LGTKQTMEEDFYTSRLAKYNIETIIPNNEERTFIHHVI--LNELSR 165
>gi|16080496|ref|NP_391323.1| amino acid racemase [Bacillus subtilis subsp. subtilis str. 168]
gi|221311392|ref|ZP_03593239.1| amino acid racemase [Bacillus subtilis subsp. subtilis str. 168]
gi|221320634|ref|ZP_03601928.1| amino acid racemase [Bacillus subtilis subsp. subtilis str. JH642]
gi|221324919|ref|ZP_03606213.1| amino acid racemase [Bacillus subtilis subsp. subtilis str. SMY]
gi|402777606|ref|YP_006631550.1| amino acid racemase [Bacillus subtilis QB928]
gi|452913706|ref|ZP_21962334.1| aspartate racemase family protein [Bacillus subtilis MB73/2]
gi|226693554|sp|P32960.2|RACX_BACSU RecName: Full=Probable amino-acid racemase
gi|1945684|emb|CAB08017.1| amino acid racemase [Bacillus subtilis]
gi|2635956|emb|CAB15448.1| amino acid racemase [Bacillus subtilis subsp. subtilis str. 168]
gi|402482785|gb|AFQ59294.1| Amino acid racemase [Bacillus subtilis QB928]
gi|407966292|dbj|BAM59531.1| amino acid racemase [Bacillus subtilis BEST7003]
gi|452118734|gb|EME09128.1| aspartate racemase family protein [Bacillus subtilis MB73/2]
Length = 227
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 37/174 (21%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + K++ +L G ND +P ++ C P + HD
Sbjct: 2 IGILAGMGPKSTSPFIDKVIDYCQKLYGASNDIDYPHMMIYSCPTPFYADRPIDHDEMKK 61
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
+ ++ G V+L EK G I +PC+ +H++++E+ + SVP LH
Sbjct: 62 AIID---GAVKL----------------EKTGVDFIALPCNTAHVYYEEIQQALSVPMLH 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD 247
+ E KE+ K + VL + + YQ+ L+ G EV+ D
Sbjct: 103 IVEETIKEIPHPAKKAV---------VLGTEPTIQSAIYQKVLKGNGQEVIHKD 147
>gi|225017475|ref|ZP_03706667.1| hypothetical protein CLOSTMETH_01402 [Clostridium methylpentosum
DSM 5476]
gi|224949714|gb|EEG30923.1| hypothetical protein CLOSTMETH_01402 [Clostridium methylpentosum
DSM 5476]
Length = 239
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 109/249 (43%), Gaps = 35/249 (14%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
++G++GG +T L +VQ++ + D L D ++ DR+++ K
Sbjct: 2 RSLGVIGGLGPMATAYFLELIVQMTDAKTDQEHL---DVIVFNRPDVPDRTAYILGKSK- 57
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH-VSECVA 199
DS LR LE GA C+ PC SH ++++ VPFL+ V+E VA
Sbjct: 58 ------DSPFEPMLRTAHT-LETLGASCLAAPCITSHCFYEDFQAAVRVPFLNMVAETVA 110
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTL---- 255
LK+ +K R G+LA + +Q++L+ +G E V+P + E +
Sbjct: 111 -HLKQNGVK--------RAGILATTGTIHTQLFQKELEKQGLEWVIPCEIGQEQVMHLIY 161
Query: 256 --IPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDP 313
+ A + E + LR A +IL ++ L+ D P+ C+D
Sbjct: 162 NNVKAGQPVELDRFELVSSKLREA-------GAECLILGCTEL-SLIKRDYPVGPGCLDA 213
Query: 314 MDALARSTI 322
++ LA+ +I
Sbjct: 214 LEVLAQRSI 222
>gi|56697504|ref|YP_167872.1| aspartate racemase [Ruegeria pomeroyi DSS-3]
gi|56679241|gb|AAV95907.1| aspartate racemase, putative [Ruegeria pomeroyi DSS-3]
Length = 485
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 16/174 (9%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE+AGA+ I +PC+ +H + D + K +P + + A+ + + P E G ++ V
Sbjct: 312 LERAGAQAIAIPCNTAHAFVDRIQKNLDIPIISILTETARFI--GALHP-EIG---KVAV 365
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQV 280
LA + + +G YQ L+ +G + VLPD A M+ ++ + V+ R A Q+
Sbjct: 366 LATSGTIQSGLYQSALRDQGLDPVLPD-AGMQEMVMEVI--YGPSGVKAGFTTGRCAAQL 422
Query: 281 LLVRAVNT------VILASDDMQDLLPPDDPLLKKCIDPMDALARSTIKWVKSA 328
V A T IL ++ + P P + IDP + LAR+ ++ SA
Sbjct: 423 AQVIAAMTGQGAQAAILGCTELPLVHLP-APAAIRLIDPTEVLARACVQAAISA 475
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 76/180 (42%), Gaps = 25/180 (13%)
Query: 83 VGIVGGASVDSTLNLLGKLVQ---LSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+GIVGG ++L KLV + E + L PL E + R + + K
Sbjct: 8 LGIVGGLGARGGADILNKLVAATPVKSESDHREILFEQKPL--SEPIPVSRPDYLPTHRK 65
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
+ + L R +E+ G ++PC ++H + +E+ + + + + +
Sbjct: 66 --------FYVFDTLTR----MEQNGCDAALLPCFITHTFLEELAAELPIELISIGDAIV 113
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
EL + G+ RIGVL + GF+Q L + +V+ PD T E L+ A+
Sbjct: 114 AELARHH------GAARRIGVLTTPYVRRNGFFQRMLTADQ-QVLYPDAGT-EAALLEAI 165
>gi|239501409|ref|ZP_04660719.1| aspartate racemase [Acinetobacter baumannii AB900]
gi|421679711|ref|ZP_16119580.1| aspartate racemase [Acinetobacter baumannii OIFC111]
gi|445492075|ref|ZP_21460022.1| aspartate racemase [Acinetobacter baumannii AA-014]
gi|410390887|gb|EKP43267.1| aspartate racemase [Acinetobacter baumannii OIFC111]
gi|444763314|gb|ELW87650.1| aspartate racemase [Acinetobacter baumannii AA-014]
Length = 242
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 87/180 (48%), Gaps = 27/180 (15%)
Query: 82 TVGIVGGASVDST---LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG S +ST + ++VQ N L + +LN S D ++L
Sbjct: 3 TIGLLGGMSWESTALYYQQINRMVQ-----NKLGKLHSAKIILN----SVDFEEIAALQA 53
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
KG Q + + E + LEKAGA CI++ + H ++ +VPF+H+++
Sbjct: 54 KGLW-QEAGAYLAEQAQN----LEKAGADCILVCTNTMHKVAPQIEDAITVPFIHIADAT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME--HTLI 256
AKE+ N++ ++ +L + FY+ +LQ EV++P+ A + H++I
Sbjct: 109 AKEILSQNIR--------KVALLGTAFTMEQDFYKARLQDREIEVIIPNDANRKIVHSII 160
>gi|56460878|ref|YP_156159.1| aspartate racemase [Idiomarina loihiensis L2TR]
gi|56179888|gb|AAV82610.1| Aspartate racemase [Idiomarina loihiensis L2TR]
Length = 229
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 104/247 (42%), Gaps = 25/247 (10%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGG 141
TVGI+GG S +ST +L QL E L S LL L S D + + +G
Sbjct: 3 TVGIIGGMSWESTSTYYRRLNQLVNERLGG---LHSAELL---LASVDFAPIEKMQSQG- 55
Query: 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
D + L K LE AGA CIV+ + H ++ ++P LH+ + VA
Sbjct: 56 ----DWDAAAQALIGKARQLESAGAECIVIATNTMHKVAPQIETAVTIPLLHIVDAVAAH 111
Query: 202 LKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEHTLIPA 258
LK+ ++ +G+L + FY+E+L+ +V++P D T++ +
Sbjct: 112 LKQNSVH--------NVGLLGTRFTMQQPFYKERLEQNNVQVLVPEEEDSITVDSIIFKE 163
Query: 259 LDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALA 318
L + + E AR + L R VIL ++ L+ + L D +
Sbjct: 164 L--CHGQFTEKAREHYLRVIDSLAERGAQGVILGCTEIGLLVQQEHSAL-PLFDTTELHC 220
Query: 319 RSTIKWV 325
R+ W+
Sbjct: 221 RAIADWM 227
>gi|221315719|ref|ZP_03597524.1| amino acid racemase [Bacillus subtilis subsp. subtilis str. NCIB
3610]
gi|143291|gb|AAA22641.1| amino acid racemase [Bacillus subtilis]
gi|407962278|dbj|BAM55518.1| amino acid racemase [Bacillus subtilis BEST7613]
Length = 230
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 37/174 (21%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + K++ +L G ND +P ++ C P + HD
Sbjct: 5 IGILAGMGPKSTSPFIDKVIDYCQKLYGASNDIDYPHMMIYSCPTPFYADRPIDHDEMKK 64
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
+ ++ G V+L EK G I +PC+ +H++++E+ + SVP LH
Sbjct: 65 AIID---GAVKL----------------EKTGVDFIALPCNTAHVYYEEIQQALSVPMLH 105
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD 247
+ E KE+ K + VL + + YQ+ L+ G EV+ D
Sbjct: 106 IVEETIKEIPHPAKKAV---------VLGTEPTIQSAIYQKVLKGNGQEVIHKD 150
>gi|227513566|ref|ZP_03943615.1| aspartate racemase [Lactobacillus buchneri ATCC 11577]
gi|227083439|gb|EEI18751.1| aspartate racemase [Lactobacillus buchneri ATCC 11577]
Length = 242
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Query: 169 IVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILT 228
V+PC+ +H D++ SVP LH+ KE+K + S R+G++A L
Sbjct: 80 FVIPCNTAHYSFDDLQALTSVPILHMPRETVKEIKH------DVPSAKRVGLIATRGTLH 133
Query: 229 AGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKD-VEG 269
G Y ++++H G+++V PD+ T T+ D + K+ V+G
Sbjct: 134 DGIYDQEIRHAGYDLVKPDEKTANQTMELIYDDIKEKNQVDG 175
>gi|403381829|ref|ZP_10923886.1| aspartate racemase [Paenibacillus sp. JC66]
Length = 231
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 117/253 (46%), Gaps = 29/253 (11%)
Query: 77 LNQANTVGIVGGASVDSTLNLLGKLVQLS---GEENDFPFLLCSDPLLNKELLSHDRSSF 133
++++ TVGI+GG +T++L+ K++Q + E+ ++ P + DR++
Sbjct: 1 MSKSRTVGIIGGMGPLATVDLMNKIIQQTPARQEQEHLHLIVDQYPQIP------DRTA- 53
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
++ +G +VE+ RR LE AGA I + C+ +H + ++ + ++P LH
Sbjct: 54 -AILGRGSD---PVPYLVESARR----LESAGAELIAIACNTAHYYVRQLEETVAIPILH 105
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ L++ +K + G+LA + L + YQ+ L + V+P+ A +H
Sbjct: 106 MPRQTVAHLEKRGVK--------KAGLLATDGTLQSRLYQDLLASREIDAVVPEPAVQQH 157
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDP 313
+ + A+ D+E +LL A L VI ++ +L + L I+P
Sbjct: 158 VM-QGIYAVKIGDLEMGVSLLAEAANSLAAAGAEVVIAGCTEVPIVLSTSEQL--HIINP 214
Query: 314 MDALARSTIKWVK 326
+ LA+ I +
Sbjct: 215 TEILAKEVIAQAR 227
>gi|423482465|ref|ZP_17459155.1| aspartate racemase [Bacillus cereus BAG6X1-2]
gi|401143769|gb|EJQ51303.1| aspartate racemase [Bacillus cereus BAG6X1-2]
Length = 234
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+E +GA C++M + H++ +EV K S+P LH+ + A+ + E N+K RIG+
Sbjct: 70 VENSGAECLLMCSNTIHLFAEEVEKAISIPLLHIGDVSAETMIEYNIK--------RIGL 121
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEHTLIPAL 259
L + FY+ +L + E ++P D+ + H ++ L
Sbjct: 122 LGTKQTMEQDFYKSRLANYNIESIIPNEEDRTFIHHVILQEL 163
>gi|428281019|ref|YP_005562754.1| amino acid racemase [Bacillus subtilis subsp. natto BEST195]
gi|291485976|dbj|BAI87051.1| amino acid racemase [Bacillus subtilis subsp. natto BEST195]
Length = 227
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 109/253 (43%), Gaps = 48/253 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + K++ +L G ND +P ++ C P + HD
Sbjct: 2 IGILAGMGPKSTSPFIDKVIDYCQKLYGASNDIDYPHMMIYSCPTPFYADRPIDHDEMKK 61
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
+ ++ G V+L EK I +PC+ +H++++E+ + SVP LH
Sbjct: 62 AIID---GAVKL----------------EKTDVDFIALPCNTAHVYYEEIQQALSVPMLH 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME- 252
+ E KE+ K + VL + + YQ+ L+ G EVV D
Sbjct: 103 IVEETIKEIPHPAKKAV---------VLGTEPTIQSAIYQKVLEENGQEVVHKDHWQQAV 153
Query: 253 HTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQ---DLLPPDDPLLKK 309
+ LI A+ N +E +++L + + + A + +I A D+ D + + P+
Sbjct: 154 NQLIAAIKQPNH--MEYSQSLWQTLYEEISQHA-DIIISACTDLNAVLDHIQSEIPM--- 207
Query: 310 CIDPMDALARSTI 322
ID LA+ST+
Sbjct: 208 -IDSSACLAKSTV 219
>gi|423396782|ref|ZP_17373983.1| aspartate racemase [Bacillus cereus BAG2X1-1]
gi|423407633|ref|ZP_17384782.1| aspartate racemase [Bacillus cereus BAG2X1-3]
gi|401651358|gb|EJS68923.1| aspartate racemase [Bacillus cereus BAG2X1-1]
gi|401658959|gb|EJS76448.1| aspartate racemase [Bacillus cereus BAG2X1-3]
Length = 227
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 56/102 (54%), Gaps = 11/102 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+EK+GA C++M + H++ +EV + S+P LH+ + A+++ E N+K RIG+
Sbjct: 70 VEKSGAECLLMCSNTVHLFAEEVEQAISIPLLHIGDVSAEKMVEQNIK--------RIGL 121
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEHTLIPAL 259
L + FY+ +L + E ++P ++ + H ++ L
Sbjct: 122 LGTKQTMEQDFYKSRLANYNIETIIPNDEERTFIHHVILNEL 163
>gi|302386999|ref|YP_003822821.1| aspartate racemase [Clostridium saccharolyticum WM1]
gi|302197627|gb|ADL05198.1| aspartate racemase [Clostridium saccharolyticum WM1]
Length = 230
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 83/177 (46%), Gaps = 31/177 (17%)
Query: 82 TVGIVGGASVDSTLNLLGKLV------QLSGEENDFPFLLCSDPLLNKELLSHDRSSFSS 135
T+G++GG S +ST+ K+V QL G L S +L L S D S
Sbjct: 3 TIGLLGGMSWESTVTYY-KIVNETVKKQLGG--------LHSAKVL---LYSVDFSEIE- 49
Query: 136 LNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195
C+ G ++I+ + LEKAGA IV+ + H + + S+P +H++
Sbjct: 50 -KCQAEGDWEKSAVILSTAAKN---LEKAGADFIVICTNTMHKVASRIQENISIPIIHIA 105
Query: 196 ECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
E A ELK N+ ++ +L +T FY+EKL + G V++PD+ +E
Sbjct: 106 EATADELKRHNIT--------KVALLGTKYTMTQDFYKEKLINAGITVLIPDEQEIE 154
>gi|296505218|ref|YP_003666918.1| aspartate racemase [Bacillus thuringiensis BMB171]
gi|296326270|gb|ADH09198.1| aspartate racemase [Bacillus thuringiensis BMB171]
Length = 224
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 16/160 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE GA I MPC+ +H++ +E+ S+P L++ + + + + N+K R+ +
Sbjct: 70 LESTGASFIAMPCNTAHLYFEELQHSLSIPILNIVDETLQAIPK-NVK--------RVAL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDK-ATMEHTLIPALDALNRKDVEGARNLLRIALQ 279
LA A + AG YQ+ + E + +K TM + +I + + +VE AR L AL
Sbjct: 121 LATEATVQAGIYQDGIAKRNIEYIHYEKWQTMINQIITYIKS---GEVEKARKLWS-ALV 176
Query: 280 VLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALAR 319
V L V+TVI+A D+ + D +C+ DA+ R
Sbjct: 177 VQLKDEVDTVIIACTDLNVVASEDFVDSSQCL--ADAVVR 214
>gi|227524709|ref|ZP_03954758.1| aspartate racemase [Lactobacillus hilgardii ATCC 8290]
gi|227088193|gb|EEI23505.1| aspartate racemase [Lactobacillus hilgardii ATCC 8290]
Length = 242
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Query: 169 IVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILT 228
V+PC+ +H D++ SVP LH+ KE+K + S R+G++A L
Sbjct: 80 FVIPCNTAHYSFDDLQALTSVPILHMPRETVKEIKH------DVPSAKRVGLIATRGTLH 133
Query: 229 AGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKD-VEG 269
G Y ++++H G+++V PD+ T T+ D + K+ V+G
Sbjct: 134 DGIYDQEIRHAGYDLVKPDEKTANQTMELIYDDIKEKNQVDG 175
>gi|450052209|ref|ZP_21841189.1| putative amino acid recemase [Streptococcus mutans NFSM1]
gi|449201057|gb|EMC02070.1| putative amino acid recemase [Streptococcus mutans NFSM1]
Length = 229
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 23/171 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGE--ENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG S +ST QL E + +F L + LL S D +
Sbjct: 2 KTIGLIGGMSWESTTTYY----QLINETIKKEFGGLHSAKILL----YSVDFAEIERYQA 53
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
G D + E L + LE+AGA IV+ + H ++ + +VP LH+++
Sbjct: 54 SG-----DWAKSAEVLSQIAQKLEQAGADFIVICTNTMHKVAPQIQEKITVPILHIAQAT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
A+ + E ++ ++G+L +T FY+EKL G EV++PD+A
Sbjct: 109 AEAILENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQA 151
>gi|57237092|ref|YP_178104.1| aspartate racemase [Campylobacter jejuni RM1221]
gi|384442438|ref|YP_005658690.1| Aspartate racemase [Campylobacter jejuni subsp. jejuni S3]
gi|419634364|ref|ZP_14166754.1| aspartate racemase [Campylobacter jejuni subsp. jejuni LMG 23269]
gi|424847335|ref|ZP_18271914.1| putative racemase [Campylobacter jejuni subsp. jejuni NW]
gi|57165896|gb|AAW34675.1| aspartate racemase, putative [Campylobacter jejuni RM1221]
gi|315057525|gb|ADT71854.1| Aspartate racemase [Campylobacter jejuni subsp. jejuni S3]
gi|356485353|gb|EHI15348.1| putative racemase [Campylobacter jejuni subsp. jejuni NW]
gi|380609340|gb|EIB29015.1| aspartate racemase [Campylobacter jejuni subsp. jejuni LMG 23269]
Length = 231
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 29/170 (17%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEE----NDFPFLLCSDPLLNKE-LLSHDRSSFSSL 136
T+GI+GG S +ST+ + Q ++ N LL S E L S D+
Sbjct: 3 TIGIIGGMSFESTITYYKTINQAINDKLKSLNSAKILLYSVNFEEIENLQSQDKWQ---- 58
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+ + I+ +K LE AGA I++ + H DE+ + ++P LH+++
Sbjct: 59 ---------EAAQILTQCAKK---LELAGANFIIIATNTMHKVFDEIQQNINIPILHIAK 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
AK LK+ N++ +IG+L +T FY++ L E V++P
Sbjct: 107 SSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKMLIEENISVIIP 148
>gi|302543198|ref|ZP_07295540.1| aspartate racemase [Streptomyces hygroscopicus ATCC 53653]
gi|302460816|gb|EFL23909.1| aspartate racemase [Streptomyces himastatinicus ATCC 53653]
Length = 241
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 111/254 (43%), Gaps = 36/254 (14%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLS---GEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+GI+GG +T + KLV ++ +++ ++ SDP + DR+ N
Sbjct: 11 IGILGGMGPAATADFYAKLVSMTPGRSDQDHLTTVIWSDPTIP------DRTEALLGNGP 64
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
D + + N R L +AGA I +PC+ +H + + +P +H+ VA
Sbjct: 65 ------DPTPWLLNGSR---VLREAGATVIAIPCNTAHAFVPRIADHVGLPIIHMIGEVA 115
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
+ L ++P + G+LA + AG YQE L G +VLPD+ ++ A+
Sbjct: 116 RHLT--TVRPAVRTA----GLLATTGTVRAGLYQEWLDRYGIRLVLPDEDDQHREVMAAI 169
Query: 260 DALNRKDVEGA---RNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD---PLLKKCIDP 313
A+ + GA +L R A + L R +I ++ LP D PL IDP
Sbjct: 170 RAV-KAGTGGAAVTASLARAARR-LTDRGAEAIIAGCTEIPLGLPADAVDVPL----IDP 223
Query: 314 MDALARSTIKWVKS 327
LA + + +S
Sbjct: 224 AAILAGALVHRARS 237
>gi|254514559|ref|ZP_05126620.1| aspartate racemase [gamma proteobacterium NOR5-3]
gi|219676802|gb|EED33167.1| aspartate racemase [gamma proteobacterium NOR5-3]
Length = 237
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 83/173 (47%), Gaps = 23/173 (13%)
Query: 77 LNQANTVGIVGGASVDSTLNLLGKLVQLSGEENDFP---FLLCSDPLLNKELLSHDRSSF 133
+ + TVGI+GG +T++L+ +++ + +D L+ ++P + S
Sbjct: 1 MTTSKTVGILGGMGPAATVDLMQRIIAATPAADDIDHIRMLVDNNPKVP--------SRM 52
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
+L K G + ++ + R+ L GA + MPC+ +H ++DEV G +PFL+
Sbjct: 53 KALVDKNGP---SPAPVLRAMARQ---LRDQGADLLAMPCNTAHHYYDEVSAGVDIPFLN 106
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
+ E V+ + A +P R+G+LA +A+ Y+ G EVV P
Sbjct: 107 MMELVSSHI--AKHQP----GVQRVGLLASSALSQIRLYEPWFDALGVEVVYP 153
>gi|229124324|ref|ZP_04253514.1| amino-acid racemase [Bacillus cereus 95/8201]
gi|228659147|gb|EEL14797.1| amino-acid racemase [Bacillus cereus 95/8201]
Length = 224
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 106/250 (42%), Gaps = 46/250 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I MPC+ +H++ DE+ + S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGASFIAMPCNTAHLYFDELQQSLSIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + K + E + R+ +LA A + AG YQ+ + E ++ +
Sbjct: 103 IVDETLKAIPE---------TAKRVALLATEATVQAGIYQDGIAKRNIEYTHYEQ--WQE 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDP 313
++ + + +VE AR L AL + L V+T I+A D+ + D +D
Sbjct: 152 SINQIITYIKSGEVEEARELWS-ALVLQLKDEVDTAIIACTDLNVVASED------FVDS 204
Query: 314 MDALARSTIK 323
LA++ ++
Sbjct: 205 AQCLAKAVVR 214
>gi|229112217|ref|ZP_04241757.1| amino-acid racemase [Bacillus cereus Rock1-15]
gi|228671201|gb|EEL26505.1| amino-acid racemase [Bacillus cereus Rock1-15]
Length = 224
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 14/137 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE GA I MPC+ +H++ +E+ S+P L++ + + + + N+K R+ +
Sbjct: 70 LESTGASFIAMPCNTAHLYFEELQHSLSIPILNIVDETLQAIPK-NIK--------RVAL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDK-ATMEHTLIPALDALNRKDVEGARNLLRIALQ 279
LA A + AG YQ+ + E + +K TM + +I + + +VE AR L AL
Sbjct: 121 LATEATVQAGIYQDGIAKRNIEYIHYEKWQTMINQIITYIKS---GEVEKARKLWS-ALV 176
Query: 280 VLLVRAVNTVILASDDM 296
V L V+TVI+A D+
Sbjct: 177 VQLKDEVDTVIIACTDL 193
>gi|403057634|ref|YP_006645851.1| aspartate/glutamate racemase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402804960|gb|AFR02598.1| putative aspartate/glutamate racemase [Pectobacterium carotovorum
subsp. carotovorum PCC21]
Length = 234
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 105/230 (45%), Gaps = 27/230 (11%)
Query: 80 ANTVGIVGGASVDSTL---NLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSL 136
+ T+G++GG S +ST+ ++ + V+ N L + +L+ S D L
Sbjct: 3 SKTLGLIGGMSWESTIPYYRIINEYVK-----NQLGGLHSAKIILH----SVDFHEIERL 53
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+G Q + ++ N+ V L +AGA IV+ + H D+V + C +P LH+++
Sbjct: 54 QSQGDWEQ--SAAVLSNIA---VGLRQAGAEAIVICTNTMHKVADDVERACQLPLLHIAD 108
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEHTL 255
LK+ +K ++G+L + FY++++Q G EV++PD E
Sbjct: 109 ATGASLKQHGLK--------KVGLLGTRYTMEQDFYRQRIQERFGVEVIVPDHEGKEAVN 160
Query: 256 IPALDALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
D L ++ + +R + + +Q L + +IL ++ L+ D
Sbjct: 161 RIIYDELCLGNINDASRQVYKDIIQQLEQQGAEGIILGCTEIPLLISAQD 210
>gi|229085488|ref|ZP_04217726.1| Aspartate racemase [Bacillus cereus Rock3-44]
gi|228697793|gb|EEL50540.1| Aspartate racemase [Bacillus cereus Rock3-44]
Length = 226
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+E +GA CI+M + H + +EV K S+P LH+ + A+E+ E ++K RIG+
Sbjct: 69 VEHSGADCILMCSNTVHQFAEEVEKAISIPLLHIGDVSAEEIIEKDVK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDK 248
L + FY+ KL + G E ++P++
Sbjct: 121 LGTKQTMEQDFYKTKLTNYGIETIIPEE 148
>gi|423426890|ref|ZP_17403921.1| aspartate racemase [Bacillus cereus BAG3X2-2]
gi|423502559|ref|ZP_17479151.1| aspartate racemase [Bacillus cereus HD73]
gi|449091718|ref|YP_007424159.1| aspartate racemase [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|401109805|gb|EJQ17723.1| aspartate racemase [Bacillus cereus BAG3X2-2]
gi|402460400|gb|EJV92122.1| aspartate racemase [Bacillus cereus HD73]
gi|449025475|gb|AGE80638.1| aspartate racemase [Bacillus thuringiensis serovar kurstaki str.
HD73]
Length = 224
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 109/251 (43%), Gaps = 48/251 (19%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAGCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I MPC+ +H++ +E+ + S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGASFIAMPCNTAHLYFEELQRSLSIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDK-ATME 252
+ + + + E + R+ +LA A + AG YQ+ + E + +K TM
Sbjct: 103 IVDETLQAIPE---------TAKRVALLATEATVQAGIYQDGIAKRNIEYIHYEKWQTMI 153
Query: 253 HTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCID 312
+ +I + + +VE AR L AL V L V+T I+A D+ + D +D
Sbjct: 154 NQIIMYIKS---GEVEEARKLWS-ALIVQLKDEVDTAIIACTDLNVVASED------FVD 203
Query: 313 PMDALARSTIK 323
LA++ ++
Sbjct: 204 SSQCLAKAVVR 214
>gi|149180603|ref|ZP_01859107.1| aspartate racemase [Bacillus sp. SG-1]
gi|148851756|gb|EDL65902.1| aspartate racemase [Bacillus sp. SG-1]
Length = 231
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 9/145 (6%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LEKAGA I++ + H D + + S+P LH+++ A ++ +K +G+
Sbjct: 71 LEKAGADFIILCTNTMHKVIDLISEHISIPVLHIADAAAVHIRSQGIKS--------VGL 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEG-ARNLLRIALQ 279
L + FY+E+L+ G EVV+PD E D L +EG +R ++ ++
Sbjct: 123 LGTRYTMEQDFYKERLRMNGIEVVVPDGKEREKINTIIFDELCVGRIEGESREYMKDIIE 182
Query: 280 VLLVRAVNTVILASDDMQDLLPPDD 304
L + ++L ++ L+ D
Sbjct: 183 SLQTKGAEGIVLGCTEIGLLIKEKD 207
>gi|431792245|ref|YP_007219150.1| aspartate racemase [Desulfitobacterium dichloroeliminans LMG
P-21439]
gi|430782471|gb|AGA67754.1| aspartate racemase [Desulfitobacterium dichloroeliminans LMG
P-21439]
Length = 236
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 83/168 (49%), Gaps = 24/168 (14%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSG---EENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+GI+GG +T+++ K+V ++ E+ ++ ++P + DR +F +
Sbjct: 5 IGIIGGMGPLATVDIFHKIVSMTEATIEQEHIHIIVDNNPGIP------DRLNFLLRD-- 56
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G + +L+ +R L+ GA ++MPCH +H ++D+V K + F+++ + A
Sbjct: 57 --GESPEKALVQSAIR-----LQCMGAAVLIMPCHTAHYFYDDVKKYVDIDFINMVDETA 109
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD 247
KE+ +A + RIG+LA AG Y + G EVV P+
Sbjct: 110 KEVVKA------LPTCKRIGLLATKGTYNAGVYDKIFAPYGIEVVKPN 151
>gi|365858670|ref|ZP_09398589.1| aspartate racemase [Acetobacteraceae bacterium AT-5844]
gi|363713797|gb|EHL97369.1| aspartate racemase [Acetobacteraceae bacterium AT-5844]
Length = 232
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 104/233 (44%), Gaps = 39/233 (16%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLS----GEENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
+G++GG S +S+ + QL G + L+ S E L H R
Sbjct: 4 IGLLGGMSWESSAEYYRIINQLMRDRLGGLHSARCLMWSFDFAEVEALQHAR-------- 55
Query: 139 KGGGVQLDDS--LIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+ DD+ L++E RR LE+ GA +V+ + H D V +P LH+++
Sbjct: 56 -----RWDDATALMIEATRR----LERGGADVVVICTNTMHRMADAVQAAIGIPVLHIAD 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKL-QHEGFEVVLP---DKATME 252
A+ +K A + R+G+L + FY+ +L G EV++P D+AT+
Sbjct: 107 PTAERIKGAGLG--------RVGLLGTAFTMEQDFYKGRLVARHGLEVLVPEEADRATV- 157
Query: 253 HTLIPALDALNRKDVEGA-RNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
H +I D L + VE A R R + L+ R VIL ++ L+ P+D
Sbjct: 158 HRII--YDELVQGRVEPASRAAYREIIARLVDRGAEAVILGCTEIMLLVKPED 208
>gi|284161291|ref|YP_003399914.1| aspartate racemase [Archaeoglobus profundus DSM 5631]
gi|284011288|gb|ADB57241.1| aspartate racemase [Archaeoglobus profundus DSM 5631]
Length = 227
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 31/174 (17%)
Query: 81 NTVGIVGGASVDSTLNLLGKLV------QLSGEENDFPFLLCSDPLLNKELLSHDRSSFS 134
T+G++GG S +STL K++ +L+G L S ++ L S D S +
Sbjct: 2 KTIGLLGGMSWESTLEYY-KIINEEVAKRLNG--------LHSAKII---LYSFDFSEIA 49
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
L + +L E L K LE AGA I++ + H D V +VP L +
Sbjct: 50 ELQSQNRWNELG-----EILAEKAKILENAGADFILICTNTMHKVADYVQSRINVPLLSI 104
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDK 248
+CVA+E+ + +K R+G+L + GFY++ L+ G EVV+PD+
Sbjct: 105 IDCVAREVVKRGIK--------RVGLLGTKFTMEDGFYEDGLRKYGLEVVIPDE 150
>gi|355574231|ref|ZP_09044074.1| hypothetical protein HMPREF1008_00051 [Olsenella sp. oral taxon 809
str. F0356]
gi|354818521|gb|EHF03010.1| hypothetical protein HMPREF1008_00051 [Olsenella sp. oral taxon 809
str. F0356]
Length = 242
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 78/179 (43%), Gaps = 29/179 (16%)
Query: 83 VGIVGGASVDSTLNLLGKLVQ---LSGEENDFPFLLCSDPLL---NKELLSHDRSSFSSL 136
+GI+GG +T + +++ + ++++ P ++ +DP + +L H R
Sbjct: 6 LGIIGGVGPLATAYFMEAIIKKTPAATDQDNIPMIVFNDPQIPDRTAYILDHSRPDPQP- 64
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+R+ +LE AGA + + C+ +H ++D + VP L++ E
Sbjct: 65 ----------------EMRKVARWLEDAGADYLAIACNTAHYFYDAISDAVDVPVLNIME 108
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTL 255
AK + L+ G R+G++A + + +G +Q L G V+P T +
Sbjct: 109 ETAKHIA------LDVGRGGRVGLMATDGTVQSGVFQGYLAERGLVGVVPRAQTQRRIM 161
>gi|419627473|ref|ZP_14160375.1| aspartate racemase, partial [Campylobacter jejuni subsp. jejuni LMG
23263]
gi|419661039|ref|ZP_14191383.1| aspartate racemase, partial [Campylobacter jejuni subsp. jejuni
2008-979]
gi|380606652|gb|EIB26550.1| aspartate racemase, partial [Campylobacter jejuni subsp. jejuni LMG
23263]
gi|380633328|gb|EIB51296.1| aspartate racemase, partial [Campylobacter jejuni subsp. jejuni
2008-979]
Length = 229
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 29/170 (17%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEE----NDFPFLLCSDPLLNKE-LLSHDRSSFSSL 136
T+GI+GG S +ST+ + Q ++ N LL S E L S D+
Sbjct: 3 TIGIIGGMSFESTITYYKTINQAINDKLKSLNSAKILLYSVNFEEIENLQSQDKWQ---- 58
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+ + I+ +K LE AGA I++ + H DE+ + ++P LH+++
Sbjct: 59 ---------EAAQILTQCAKK---LELAGANFIIIATNTMHKVFDEIQQNINIPILHIAK 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
AK LK+ N++ +IG+L +T FY++ L E V++P
Sbjct: 107 SSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKVLIEENISVIIP 148
>gi|450028756|ref|ZP_21832379.1| putative amino acid recemase [Streptococcus mutans G123]
gi|449195315|gb|EMB96645.1| putative amino acid recemase [Streptococcus mutans G123]
Length = 230
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 19/169 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +ST + + + +E L S +L L S D + G
Sbjct: 2 KTIGLIGGMSWESTTSYYQFINETIKKELGG---LHSAKIL---LYSVDFAEIEHYQASG 55
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
D + E L + LEKAGA IV+ + H ++ K ++P LH+++ A+
Sbjct: 56 -----DWAKSAEVLSQIAQKLEKAGADFIVICTNTMHKVAPQIQKQIAIPILHIAQATAE 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
L E ++ ++G+L +T FY+EKL G EV++PD+A
Sbjct: 111 TLLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQA 151
>gi|419645247|ref|ZP_14176803.1| putative racemase [Campylobacter jejuni subsp. jejuni LMG 9081]
gi|380620648|gb|EIB39516.1| putative racemase [Campylobacter jejuni subsp. jejuni LMG 9081]
Length = 231
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 29/170 (17%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEE----NDFPFLLCSDPLLNKE-LLSHDRSSFSSL 136
T+GI+GG S +ST+ + Q ++ N LL S E L S D+
Sbjct: 3 TIGIIGGMSFESTITYYKTINQAINDKLKSLNSAKILLYSVNFEEIENLQSQDKWQ---- 58
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+ + I+ +K LE AGA I++ + H DE+ + ++P LH+++
Sbjct: 59 ---------EAAQILTQCAKK---LELAGANFIIIATNTMHKVFDEIQQNINIPILHIAK 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
AK LK+ N++ +IG+L +T FY++ L E V++P
Sbjct: 107 SSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKVLIEENISVIIP 148
>gi|238023769|ref|YP_002908001.1| Aspartate racemase [Burkholderia glumae BGR1]
gi|237878434|gb|ACR30766.1| Aspartate racemase [Burkholderia glumae BGR1]
Length = 509
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 104/248 (41%), Gaps = 26/248 (10%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
+G+VGG +T++ L KLV + D L L+ + DR++ + G G
Sbjct: 262 IGVVGGVGPAATVDFLRKLVDHTPAARDQDHLKV---LVEQNPQIPDRTA----HLIGDG 314
Query: 143 VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKEL 202
SL R LE+ GA + +PC+ +H + + + +P +++ A+ L
Sbjct: 315 PDPTVSLYAACKR-----LEQGGADLVAIPCNTAHAFVERIQPHLGIPIINMLTVTARRL 369
Query: 203 KEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDAL 262
+E E +GVLA + L +G Y++ L EGF +P A +
Sbjct: 370 RERFPALRE------VGVLATSGTLASGVYRDALAAEGFAQQVPPPALQARVMAAIYGKF 423
Query: 263 NRKD--VEG-ARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKK-----CIDPM 314
K EG R + AL L+ V+L ++ LLP D + +DP
Sbjct: 424 GVKAGFTEGRCREDIGAALDALIAAGAAVVLLGCTELPLLLPMADYVAPDGAHAVLVDPT 483
Query: 315 DALARSTI 322
+ LA++ I
Sbjct: 484 EVLAKACI 491
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 156 RKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSP 215
R R F E+ G +V+PC LSH + DE+ + + + E V + ++ A +
Sbjct: 74 RIREF-ERRGVTIVVLPCFLSHTFLDELRANTPLAIVDIVEAVREHVRRAYP------AA 126
Query: 216 LRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHT 254
RIGVLA A A ++ F +V P + EH
Sbjct: 127 RRIGVLASAATREARLFERYFTAPDFVLVHPARDAAEHV 165
>gi|229072257|ref|ZP_04205463.1| amino-acid racemase [Bacillus cereus F65185]
gi|229082009|ref|ZP_04214498.1| amino-acid racemase [Bacillus cereus Rock4-2]
gi|228701308|gb|EEL53805.1| amino-acid racemase [Bacillus cereus Rock4-2]
gi|228710865|gb|EEL62834.1| amino-acid racemase [Bacillus cereus F65185]
Length = 224
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 107/251 (42%), Gaps = 48/251 (19%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAGCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I MPC+ +H++ +E+ S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGASFIAMPCNTAHLYFEELQHSLSIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDK-ATME 252
+ + + + E R+ +LA A + AG YQ+ + E + +K TM
Sbjct: 103 IVDETLQAIPETTK---------RVALLATEATVQAGIYQDGIAKRNIEYIHYEKWQTMI 153
Query: 253 HTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCID 312
+ +I + + +VE AR L AL V L V+T I+A D+ + D +D
Sbjct: 154 NQIITYIKS---GEVEEARKLWN-ALVVQLKDEVDTAIIACTDLNVVASED------FVD 203
Query: 313 PMDALARSTIK 323
LA++ ++
Sbjct: 204 SSQCLAKAVVR 214
>gi|450047018|ref|ZP_21839266.1| putative amino acid recemase [Streptococcus mutans N34]
gi|450177018|ref|ZP_21886175.1| putative amino acid recemase [Streptococcus mutans SM1]
gi|449198017|gb|EMB99149.1| putative amino acid recemase [Streptococcus mutans N34]
gi|449244308|gb|EMC42689.1| putative amino acid recemase [Streptococcus mutans SM1]
Length = 229
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 23/171 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGE--ENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG S +ST + QL E + + L + LL S D +
Sbjct: 2 KTIGLIGGMSWESTTSYY----QLINETIKKELGGLHSAKILL----YSVDFAEIEHYQA 53
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
G D + E L + LE+AGA IV+ + H ++ K ++P LH+++
Sbjct: 54 SG-----DWAKSAEVLSQIAQKLEQAGADFIVICTNTMHKVAPQIQKQTAIPILHIAQAT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
A+ L E ++ ++G+L +T FY+EKL G EV++PD+A
Sbjct: 109 AEALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQA 151
>gi|424849639|ref|ZP_18274083.1| putative racemase [Campylobacter jejuni subsp. jejuni D2600]
gi|356487277|gb|EHI17232.1| putative racemase [Campylobacter jejuni subsp. jejuni D2600]
Length = 231
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 29/170 (17%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEE----NDFPFLLCSDPLLNKE-LLSHDRSSFSSL 136
T+GI+GG S +ST+ + Q ++ N LL S E L S D+
Sbjct: 3 TIGIIGGMSFESTITYYKTINQAINDKLKSLNSAKILLYSVNFEEIENLQSQDKWQ---- 58
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+ + I+ +K LE AGA I++ + H DE+ + ++P LH+++
Sbjct: 59 ---------EAAQILTQCAKK---LELAGANFIIIATNTMHKVFDEIQQNINIPILHIAK 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
AK LK+ N++ +IG+L +T FY++ L E V++P
Sbjct: 107 SSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKVLIEENISVIIP 148
>gi|423523432|ref|ZP_17499905.1| aspartate racemase [Bacillus cereus HuA4-10]
gi|401171674|gb|EJQ78900.1| aspartate racemase [Bacillus cereus HuA4-10]
Length = 227
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+E +GA C++M + H++ +EV K S+P LH+ + AK++ E N+K RIG+
Sbjct: 70 VEHSGAECLLMCSNTVHLFAEEVEKAISIPLLHIGDVSAKKMVEHNIK--------RIGL 121
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLIPALDALNR 264
L + FY +L E ++P ++ T H +I L+ L+R
Sbjct: 122 LGTKQTMEQDFYTSRLAKYNIETIIPNDEERTFIHHVI--LNELSR 165
>gi|390434663|ref|ZP_10223201.1| aspartate racemase [Pantoea agglomerans IG1]
Length = 243
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 10/106 (9%)
Query: 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEV-CKGCSVPFLHVSECVAK 200
G ++DD+ ++ L++ L +A I +PC+L+H + E+ +P LH+++ +
Sbjct: 54 GKKVDDNAMIATLQQGITELVRAKVSLIAVPCNLAHCYFAEMKAVSSGIPLLHIADIALE 113
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
L P EA RI VLA L AGFYQ +++ G E++ P
Sbjct: 114 SL------PAEA---TRIAVLATEPTLEAGFYQARIEASGKEIIDP 150
>gi|228955032|ref|ZP_04117048.1| amino-acid racemase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|228804658|gb|EEM51261.1| amino-acid racemase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
Length = 235
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 109/251 (43%), Gaps = 48/251 (19%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 13 IGILAGMGPKSTGPFVDTVVAGCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 71
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I MPC+ +H++ +E+ + S+P L+
Sbjct: 72 --------------KAIIEGAQK----LESTGASFIAMPCNTAHLYFEELQRSLSIPILN 113
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDK-ATME 252
+ + + + E + R+ +LA A + AG YQ+ + E + +K TM
Sbjct: 114 IVDETLQAIPE---------TAKRVALLATEATVQAGIYQDGIAKRNIEYIHYEKWQTMI 164
Query: 253 HTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCID 312
+ +I + + +VE AR L AL V L V+T I+A D+ + D +D
Sbjct: 165 NQIIMYIKS---GEVEEARKLWS-ALIVQLKDEVDTAIIACTDLNVVASED------FVD 214
Query: 313 PMDALARSTIK 323
LA++ ++
Sbjct: 215 SSQCLAKAVVR 225
>gi|423455146|ref|ZP_17431999.1| aspartate racemase [Bacillus cereus BAG5X1-1]
gi|423472718|ref|ZP_17449461.1| aspartate racemase [Bacillus cereus BAG6O-2]
gi|401134929|gb|EJQ42536.1| aspartate racemase [Bacillus cereus BAG5X1-1]
gi|402427279|gb|EJV59388.1| aspartate racemase [Bacillus cereus BAG6O-2]
Length = 234
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 112/249 (44%), Gaps = 25/249 (10%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
VGI+GG +T++L+ K++ + P + D + +++ + S G
Sbjct: 5 VGIIGGMGPLATVDLMNKIISYT------PAMKDQDHI---HIIADNYSQIPDRTTAILG 55
Query: 143 VQLDDS-LIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
+D + IV++ +R L+ AGA +V+ C+ +H ++ + ++P LH+ A+
Sbjct: 56 KGMDPTPYIVQSAQR----LQNAGADFLVIACNTAHFFYKAAKRSVNIPILHMPLETARF 111
Query: 202 LKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDA 261
+++ N + ++G+LA + + YQ Q +V+ PDK M+ ++ + A
Sbjct: 112 VQKNNFR--------KVGLLATDGTIKTELYQNSCQSCRIDVIEPDK-EMQEKVMEGIYA 162
Query: 262 LNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARST 321
+ ++E L + L +I ++ +L + + IDP + +A+
Sbjct: 163 IKSGNLEKGFLYLSMVADKLKDSGAEAIIAGCTEVPLVLKSSENIC--VIDPTEIVAKMV 220
Query: 322 IKWVKSAEK 330
IK EK
Sbjct: 221 IKIANRTEK 229
>gi|421602940|ref|ZP_16045435.1| aspartate racemase [Bradyrhizobium sp. CCGE-LA001]
gi|404264947|gb|EJZ30132.1| aspartate racemase [Bradyrhizobium sp. CCGE-LA001]
Length = 229
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 19/166 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +ST + KL+ + D L S PLL + S+D + G
Sbjct: 2 RTIGLIGGMSWESTAHYY-KLI--NERVRDRMGKLHSAPLL---MYSYDFQGIKEMQYAG 55
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
+ SL E RR LE AGAR IV+ + H E+ +VPF+H+ + A+
Sbjct: 56 RWSEAAASL-AEVARR----LENAGARAIVLCTNTMHKVAPEIISSLTVPFIHIGDATAQ 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
++ + R+G+L + FY ++L+ +V++P
Sbjct: 111 RIRSKGYR--------RVGLLGTKFTMEEQFYIDRLRAHDLDVLIP 148
>gi|254362280|ref|ZP_04978393.1| aspartate racemase [Mannheimia haemolytica PHL213]
gi|261492806|ref|ZP_05989353.1| aspartate racemase [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261494828|ref|ZP_05991306.1| aspartate racemase [Mannheimia haemolytica serotype A2 str. OVINE]
gi|452746021|ref|ZP_21945853.1| RacX protein [Mannheimia haemolytica serotype 6 str. H23]
gi|153093857|gb|EDN74789.1| aspartate racemase [Mannheimia haemolytica PHL213]
gi|261309539|gb|EEY10764.1| aspartate racemase [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261311488|gb|EEY12644.1| aspartate racemase [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|452086160|gb|EME02551.1| RacX protein [Mannheimia haemolytica serotype 6 str. H23]
Length = 229
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 103/234 (44%), Gaps = 40/234 (17%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSF--SSLN-- 137
T+GI+GG S +ST++ + L + +NK L + + SS+N
Sbjct: 3 TLGILGGMSAESTVS----------------YYLDINRSVNKVLGGNSSAKILISSVNFE 46
Query: 138 ----C-KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFL 192
C K G Q ++ E R LE+AGA I++ + H D++ SVPFL
Sbjct: 47 EIVQCQKQGNWQAAAEILSEQAR----LLEQAGAEGILLATNTMHKIADQISSHISVPFL 102
Query: 193 HVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
H+ +CVA+ + ++ ++ +L ++ FY++ L G ++PD+ T +
Sbjct: 103 HILDCVAEAISAQGLQ--------KVALLGTKFTMSDNFYKDGLLERGITSIVPDEETQQ 154
Query: 253 --HTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
H +I L K E A+ +Q L + VIL ++ L+ +D
Sbjct: 155 EIHRIIFEELCLG-KITESAKAFYLQTIQQLSEQGAEGVILGCTEIGLLINQND 207
>gi|49478746|ref|YP_038797.1| aspartate racemase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|49330302|gb|AAT60948.1| aspartate racemase [Bacillus thuringiensis serovar konkukian str.
97-27]
Length = 224
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 108/250 (43%), Gaps = 46/250 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I MPC+ +H++ +E+ + S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGASFIAMPCNTAHLYFEELQQSLSIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + K + E N K R+ +LA A + +G YQ+ + E + ++ +
Sbjct: 103 IVDETLKAIPE-NTK--------RVALLATEATVQSGIYQDGIAKRNIEYIHYEQ--WQE 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDP 313
++ + + +VE AR L AL + L V+T I+A D+ L D ID
Sbjct: 152 SINQIITYIKSGEVEEARELWS-ALVLQLKDEVDTAIIACTDLNVLASED------FIDS 204
Query: 314 MDALARSTIK 323
LA++ ++
Sbjct: 205 SQCLAKAVVR 214
>gi|445419274|ref|ZP_21435154.1| aspartate racemase [Acinetobacter sp. WC-743]
gi|444759940|gb|ELW84400.1| aspartate racemase [Acinetobacter sp. WC-743]
Length = 263
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 27/174 (15%)
Query: 80 ANTVGIVGGASVDST---LNLLGKLVQLS-GEENDFPFLLCSDPLLNKELLSHDRSSFSS 135
T+G++GG S +ST L K VQ G+ + +L S E+L
Sbjct: 35 VKTIGLLGGMSWESTDLYYQQLNKSVQQKLGKLHSAKVVLISVDFAEIEILQRQ------ 88
Query: 136 LNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195
G+ D + L+ K V LE+AGA I++ + H + S+PF+H++
Sbjct: 89 ------GLWEDAGI---YLKEKAVQLEQAGAEGILLCTNTMHKVASYIEHSISIPFIHIA 139
Query: 196 ECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
+ AKE+ N++ ++G+L + FY+++L+ +G V++P +A
Sbjct: 140 DATAKEILNQNIR--------KVGLLGTRFTMEQDFYKQRLEQQGINVLIPHQA 185
>gi|229032411|ref|ZP_04188381.1| amino-acid racemase [Bacillus cereus AH1271]
gi|228728913|gb|EEL79919.1| amino-acid racemase [Bacillus cereus AH1271]
Length = 225
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 42/224 (18%)
Query: 83 VGIVGGASVDSTL----NLLGKLVQLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST ++ K + G ++D FP ++ C P L+ H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAKCQTIYGAKHDMDFPHMMIYSCPTPFYMDRLIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE G I MPC+ +H++ +E+ S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGVEFIAMPCNTAHLYFEELQHSLSIPVLN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDK-ATME 252
+ + + + E N K R+ +LA A + AG YQ+ + E + +K TM
Sbjct: 103 IVDETLQAIPE-NTK--------RVALLATEATIQAGIYQDGITKRNIEYIHHEKWQTMI 153
Query: 253 HTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
+ +I + ++E AR L + L V L V+T I+A D+
Sbjct: 154 NQIITCIKG---GEIEEARELWSV-LVVQLKAEVDTAIIACTDL 193
>gi|449095894|ref|YP_007428385.1| amino acid racemase [Bacillus subtilis XF-1]
gi|449029809|gb|AGE65048.1| amino acid racemase [Bacillus subtilis XF-1]
Length = 230
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 37/174 (21%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + K++ +L G ND +P ++ C P + H
Sbjct: 5 IGILAGMGPKSTSPFIDKVIDYCQKLYGASNDIDYPHMMIYSCPTPFYADRPIDHAEMKK 64
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
+ ++ G V+L EK G I +PC+ +H++++E+ + SVP LH
Sbjct: 65 AIID---GAVKL----------------EKTGVDFIALPCNTAHVYYEEIQQALSVPMLH 105
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD 247
+ E KE+ + K + VL + + YQ+ L+ G EVV D
Sbjct: 106 IVEETIKEIPQPAKKAV---------VLGTEPTIQSAIYQKVLKENGKEVVHKD 150
>gi|205356462|ref|ZP_03223226.1| putative amino-acid recemase [Campylobacter jejuni subsp. jejuni
CG8421]
gi|205345649|gb|EDZ32288.1| putative amino-acid recemase [Campylobacter jejuni subsp. jejuni
CG8421]
Length = 193
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 29/170 (17%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEE----NDFPFLLCSDPLLNKE-LLSHDRSSFSSL 136
T+GI+GG S +ST+ + Q ++ N LL S E L S D+
Sbjct: 3 TIGIIGGMSFESTITYYKTINQAINDKLKSLNSAKILLYSVNFEEIENLQSQDKWQ---- 58
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+ + I+ +K LE AGA I++ + H DE+ + ++P LH+++
Sbjct: 59 ---------EAAQILTQCAKK---LELAGANFIIIATNTMHKVFDEIQQNINIPILHIAK 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
AK LK+ N++ +IG+L +T FY++ L E V++P
Sbjct: 107 SSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKVLIEENISVIIP 148
>gi|390962038|ref|YP_006425872.1| putative aspartate racemase 1 [Thermococcus sp. CL1]
gi|390520346|gb|AFL96078.1| putative aspartate racemase 1 [Thermococcus sp. CL1]
Length = 226
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 29/182 (15%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
+GI+GG S ++T K +++S E+ +P + EL+ + +F G
Sbjct: 4 IGIIGGTSPEATCYYYKKYLEISREK--------FEPYVFPELIIYS-INFKEFIHNPNG 54
Query: 143 VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKEL 202
+ +++ + LE+AGA I + + HI +V + +VP + + + + +E+
Sbjct: 55 WEGRKEILINAAKA----LERAGAEIISLSANTPHIVFPDVQRTINVPMVSIIDALIEEM 110
Query: 203 KEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDAL 262
K ++ R+ +L +TA FY+ L+ GFEVV P + M D L
Sbjct: 111 KRRGVR--------RVLLLGTKTTMTADFYKNALREAGFEVVTPSEEEM--------DEL 154
Query: 263 NR 264
NR
Sbjct: 155 NR 156
>gi|449937117|ref|ZP_21804384.1| putative amino acid recemase [Streptococcus mutans 2ST1]
gi|450155368|ref|ZP_21878217.1| putative amino acid recemase [Streptococcus mutans 21]
gi|449164800|gb|EMB67841.1| putative amino acid recemase [Streptococcus mutans 2ST1]
gi|449237245|gb|EMC36116.1| putative amino acid recemase [Streptococcus mutans 21]
Length = 230
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 19/169 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +ST + + + +E L S +L L S D + G
Sbjct: 2 KTIGLIGGMSWESTTSYYQFINETIKKELGG---LHSAKIL---LYSVDFAEIEHYQASG 55
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
D + E L + LEKAGA IV+ + H ++ K ++P LH+++ A+
Sbjct: 56 -----DWAKSAEVLSQIAQKLEKAGADFIVICTNTMHKVAPQIQKQIAIPILHIAQATAE 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
L E ++ ++G+L +T FY+EKL G EV++PD+A
Sbjct: 111 ALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQA 151
>gi|423549493|ref|ZP_17525820.1| aspartate racemase [Bacillus cereus ISP3191]
gi|401191246|gb|EJQ98269.1| aspartate racemase [Bacillus cereus ISP3191]
Length = 224
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 107/250 (42%), Gaps = 46/250 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I MPC+ +H++ DE+ + S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGASFIAMPCNTAHLYFDELQQSLSIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + K + + + R+ +LA A + AG YQ+ + E + ++ +
Sbjct: 103 IVDETLKAIPK---------TAKRVALLATEATVQAGIYQDGIAKRNIEYIHYEQ--WQE 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDP 313
++ + + +VE AR L AL + L V+T I+A D+ + D +D
Sbjct: 152 SINQIITYIKSGEVEEARELWS-ALVLQLKDEVDTAIIACTDLNVVASED------FVDS 204
Query: 314 MDALARSTIK 323
LA++ ++
Sbjct: 205 AQCLAKAVVR 214
>gi|449916618|ref|ZP_21796953.1| putative amino acid recemase [Streptococcus mutans 15JP3]
gi|449981106|ref|ZP_21817611.1| putative amino acid recemase [Streptococcus mutans 5SM3]
gi|450087952|ref|ZP_21854546.1| putative amino acid recemase [Streptococcus mutans NV1996]
gi|450125704|ref|ZP_21867787.1| putative amino acid recemase [Streptococcus mutans U2A]
gi|450131320|ref|ZP_21869411.1| putative amino acid recemase [Streptococcus mutans NLML8]
gi|450158902|ref|ZP_21879095.1| putative amino acid recemase [Streptococcus mutans 66-2A]
gi|449153915|gb|EMB57542.1| putative amino acid recemase [Streptococcus mutans NLML8]
gi|449154990|gb|EMB58526.1| putative amino acid recemase [Streptococcus mutans 15JP3]
gi|449176063|gb|EMB78429.1| putative amino acid recemase [Streptococcus mutans 5SM3]
gi|449217064|gb|EMC17139.1| putative amino acid recemase [Streptococcus mutans NV1996]
gi|449232226|gb|EMC31352.1| putative amino acid recemase [Streptococcus mutans U2A]
gi|449241761|gb|EMC40379.1| putative amino acid recemase [Streptococcus mutans 66-2A]
Length = 230
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 23/171 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGE--ENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG S +ST + QL E + + L + LL S D +
Sbjct: 2 KTIGLIGGMSWESTTSYY----QLINETIKKELGGLHSAKILL----YSVDFAEIEHYQA 53
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
G D + E L + LE+AGA IV+ + H ++ K ++P LH+++
Sbjct: 54 SG-----DWAKSAEVLSQIAQKLEQAGADFIVICTNTMHKVAPQIQKQIAIPILHIAQAT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
A+ L E ++ ++G+L +T FY+EKL G EV++PD+A
Sbjct: 109 AEALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQA 151
>gi|423419291|ref|ZP_17396380.1| aspartate racemase [Bacillus cereus BAG3X2-1]
gi|401105897|gb|EJQ13864.1| aspartate racemase [Bacillus cereus BAG3X2-1]
Length = 227
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 12/106 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+E +GA C++M H++ +EV + S+P LH+ + AKE+ E N+K RIG+
Sbjct: 70 VENSGAECLLMCSITVHLFAEEVEQAISIPLLHIGDVSAKEMVEKNIK--------RIGL 121
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLIPALDALNR 264
L + FY +L E ++P ++ T H +I L+ L+R
Sbjct: 122 LGTKQTMEQDFYTSRLAKYNIETIIPNDEERTFIHHVI--LNELSR 165
>gi|450120580|ref|ZP_21865776.1| putative amino acid recemase [Streptococcus mutans ST6]
gi|449230073|gb|EMC29352.1| putative amino acid recemase [Streptococcus mutans ST6]
Length = 230
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 23/171 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGE--ENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG S +ST + QL E + + L + LL S D +
Sbjct: 2 KTIGLIGGMSWESTTSYY----QLINETIKKELGGLHSAKILL----YSVDFAEIEHYQA 53
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
G D + E L + LE+AGA IV+ + H ++ K ++P LH+++
Sbjct: 54 SG-----DWAKSAEVLSQIAQKLEQAGADFIVICTNTMHKVAPQIQKQIAIPILHIAQAT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
A+ L E ++ ++G+L +T FY+EKL G EV++PD+A
Sbjct: 109 AEALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQA 151
>gi|86154055|ref|ZP_01072256.1| aspartate racemase [Campylobacter jejuni subsp. jejuni HB93-13]
gi|419669695|ref|ZP_14199467.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1997-11]
gi|85842469|gb|EAQ59683.1| aspartate racemase [Campylobacter jejuni subsp. jejuni HB93-13]
gi|380646543|gb|EIB63505.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1997-11]
Length = 231
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 29/170 (17%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEE----NDFPFLLCSDPLLNKE-LLSHDRSSFSSL 136
T+GI+GG S +ST+ + Q ++ N LL S E L S D+
Sbjct: 3 TIGIIGGMSFESTITYYKTINQAINDKLKSLNSAKILLYSVNFEEIENLQSQDKWQ---- 58
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+ + I+ +K LE AGA I++ + H DE+ + ++P LH+++
Sbjct: 59 ---------EAAQILTQCAKK---LELAGANFIIIATNTMHKVFDEIQQNINIPILHIAK 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
AK LK+ N++ +IG+L +T FY++ L E V+ P
Sbjct: 107 SSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKMLIEENISVITP 148
>gi|228929809|ref|ZP_04092825.1| amino-acid racemase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228829866|gb|EEM75487.1| amino-acid racemase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
Length = 224
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 107/250 (42%), Gaps = 46/250 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I MPC+ +H++ +E+ + S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGASFIAMPCNTAHLYFEELQQSLSIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + K + E + R+ +LA A + AG YQ+ + E + ++ +
Sbjct: 103 IVDETLKAIPE---------TAKRVALLATEATVQAGIYQDGIAKRNIEYIHYEQ--WQE 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDP 313
++ + + +VE AR L AL + L V+T I+A D+ + D +D
Sbjct: 152 SINQIITYIKSGEVEEARELWS-ALVLQLKDEVDTAIIACTDLNVVASED------FVDS 204
Query: 314 MDALARSTIK 323
LA++ ++
Sbjct: 205 AQCLAKAVVR 214
>gi|212223817|ref|YP_002307053.1| aspartate racemase [Thermococcus onnurineus NA1]
gi|212008774|gb|ACJ16156.1| aspartate racemase [Thermococcus onnurineus NA1]
Length = 229
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 113/246 (45%), Gaps = 28/246 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLS--GEENDFP-FLLCSDPLLNKELLSHDRSSFSSLN 137
+GI+GG +T L ++++ + + D P ++ ++P + DR++F
Sbjct: 4 RVIGILGGMGPLATAELFRRIIEKTPAKRDQDHPRIIIYNNPKIP------DRTAF---- 53
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
G G L VE+ R+ LE GA I+MPC+ +H + + + + S+P + + E
Sbjct: 54 ILGEGEDPRPEL-VESARK----LESWGADFIIMPCNTAHFFAESIQRKISIPLVSMVEE 108
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIP 257
AK ++E +K ++G+LA + + Y L G ++ +P K E +
Sbjct: 109 TAKRIEEMGLK--------KVGLLATDGTIKGLVYHRALLDRGIQIAVPIKKDQELVMKG 160
Query: 258 ALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDAL 317
+ + ++E R LL + L R+ +I ++ L P+D L IDP+D +
Sbjct: 161 IYEGVKAGNLELGRELLLRVARRLEKRS-EGIIAGCTEVSVALKPED-LSVPLIDPLDVI 218
Query: 318 ARSTIK 323
A ++
Sbjct: 219 AEMAVR 224
>gi|423584720|ref|ZP_17560807.1| aspartate racemase [Bacillus cereus VD045]
gi|401235946|gb|EJR42413.1| aspartate racemase [Bacillus cereus VD045]
Length = 224
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 14/137 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE G I MPC+ +H++ +E+ + S+P L++ + + + E N K R+ +
Sbjct: 70 LESTGVSFIAMPCNTAHLYFEELQRSLSIPILNIVDETLQSIPE-NTK--------RVAL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDK-ATMEHTLIPALDALNRKDVEGARNLLRIALQ 279
LA A + AG YQ+ + E + +K TM + +I + + +VE AR L AL
Sbjct: 121 LATEATVQAGIYQDGIAKRNIEYIHYEKWQTMINQIITYIKS---GEVEKARKLWS-ALV 176
Query: 280 VLLVRAVNTVILASDDM 296
V L V+T I+A D+
Sbjct: 177 VQLKDEVDTAIIACTDL 193
>gi|419693776|ref|ZP_14221758.1| aspartate racemase [Campylobacter jejuni subsp. jejuni LMG 9872]
gi|380672071|gb|EIB87253.1| aspartate racemase [Campylobacter jejuni subsp. jejuni LMG 9872]
Length = 230
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 29/170 (17%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEE----NDFPFLLCSDPLLNKE-LLSHDRSSFSSL 136
T+GI+GG S +ST+ + Q ++ N LL S E L S D+
Sbjct: 3 TIGIIGGMSFESTITYYKTINQAINDKLKSLNSAKILLYSVNFEEIENLQSQDKWQ---- 58
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+ + I+ +K LE AGA I++ + H DE+ + ++P LH+++
Sbjct: 59 ---------EAAQILTQCAKK---LELAGANFIIIATNTMHKVFDEIQQNINIPILHIAK 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
AK LK+ N++ +IG+L +T FY++ L E V+ P
Sbjct: 107 SSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKMLIEENISVITP 148
>gi|301056262|ref|YP_003794473.1| aspartate racemase [Bacillus cereus biovar anthracis str. CI]
gi|300378431|gb|ADK07335.1| aspartate racemase [Bacillus cereus biovar anthracis str. CI]
Length = 224
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 107/250 (42%), Gaps = 46/250 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDIDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I MPC+ +H++ +E+ + S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGASFIAMPCNTAHLYFEELQQSLSIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + K + E + R+ +LA A + AG YQ+ + E + ++ +
Sbjct: 103 IVDETLKAIPE---------TAKRVALLATEATVQAGIYQDGIAKRNIEYIHYEQ--WQE 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDP 313
++ + + +VE AR L AL + L V+T I+A D+ + D +D
Sbjct: 152 SINQIITYIKSGEVEEARELWS-ALVLQLKDEVDTAIIACTDLNVVASED------FVDS 204
Query: 314 MDALARSTIK 323
LA++ ++
Sbjct: 205 AQCLAKAVVR 214
>gi|419634990|ref|ZP_14167311.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 55037]
gi|380613761|gb|EIB33229.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 55037]
Length = 231
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 29/170 (17%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEE----NDFPFLLCSDPLLNKE-LLSHDRSSFSSL 136
T+GI+GG S +ST+ + Q ++ N LL S E L S D+ ++
Sbjct: 3 TIGIIGGMSFESTITYYKTINQAINDKLKSLNSAKILLYSVNFEEIENLQSQDKWQEAA- 61
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
++ + +R LE AGA I++ + H DE+ + ++P LH+++
Sbjct: 62 -----------QILTQCAKR----LELAGANFIIIATNTMHKVFDEIQQNINIPILHIAK 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
AK LK+ N++ +IG+L +T FY++ L E V+ P
Sbjct: 107 SSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKILIEENISVITP 148
>gi|206969422|ref|ZP_03230376.1| aspartate racemase family protein [Bacillus cereus AH1134]
gi|206735110|gb|EDZ52278.1| aspartate racemase family protein [Bacillus cereus AH1134]
Length = 224
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 20/164 (12%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE GA I MPC+ +H++ +E+ + S+P L++ + K + E + R+ +
Sbjct: 70 LESTGASFIAMPCNTAHLYFEELQRSLSIPILNIVDETLKAIPE---------TAKRVAL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDK-ATMEHTLIPALDALNRKDVEGARNLLRIALQ 279
LA A + AG YQ+ + E + +K TM + +I + + +VE A L AL
Sbjct: 121 LATEATVQAGIYQDGIAKRNIEYIHYEKWQTMINQIITYIKS---GEVEEAHKLWN-ALV 176
Query: 280 VLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIK 323
V L V+T I+A D+ + D +D LA++ ++
Sbjct: 177 VQLKDEVDTAIIACTDLNVVASED------FVDSSQCLAKAVVR 214
>gi|225866744|ref|YP_002752122.1| aspartate racemase family protein [Bacillus cereus 03BB102]
gi|225790790|gb|ACO31007.1| aspartate racemase family protein [Bacillus cereus 03BB102]
Length = 224
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 107/250 (42%), Gaps = 46/250 (18%)
Query: 83 VGIVGGASVDSTL----NLLGKLVQLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST ++ K + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAKCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I MPC+ +H++ E+ + S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGASFIAMPCNTAHLYFKELQQSISIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + + + E N K R+ +LA A + AG YQ+ + E + +K +
Sbjct: 103 IVDETLQVIPE-NTK--------RVALLATEATVQAGIYQDGIAKRNIEYIHHEK--WQE 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDP 313
++ + + ++E AR L AL + L V+T I+A D+ + D +D
Sbjct: 152 SINQIISCIKGGEIEKARELWN-ALVLQLKDEVDTAIIACTDLNVVASED------FVDS 204
Query: 314 MDALARSTIK 323
LA++ +K
Sbjct: 205 AQCLAKAVVK 214
>gi|449885706|ref|ZP_21785747.1| putative amino acid recemase [Streptococcus mutans SA41]
gi|449254982|gb|EMC52864.1| putative amino acid recemase [Streptococcus mutans SA41]
Length = 230
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 23/171 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGE--ENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG S +ST QL E + + L + LL S D +
Sbjct: 2 KTIGLIGGMSWEST----ATYYQLINETIKKELGGLHSAKILL----YSVDFAEIEHYQA 53
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
G D + E L + LE+AGA IV+ + H ++ K ++P LH+++
Sbjct: 54 SG-----DWAKSAEVLSQIAQKLEQAGADFIVICTNTMHKVAPQIQKQIAIPILHIAQAT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
A+ L E ++ ++G+L +T FY+EKL G EV++PD+A
Sbjct: 109 AEALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQA 151
>gi|424059414|ref|ZP_17796905.1| aspartate racemase [Acinetobacter baumannii Ab33333]
gi|404670152|gb|EKB38044.1| aspartate racemase [Acinetobacter baumannii Ab33333]
Length = 242
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 27/180 (15%)
Query: 82 TVGIVGGASVDST---LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG S +ST + ++VQ N L + +LN S D + L
Sbjct: 3 TIGLLGGMSWESTALYYQQINRMVQ-----NKLGKLHSAKIILN----SVDFEEIAVLQA 53
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
KG Q + + E + LEKAGA CI++ + H ++ +VPF+H+++
Sbjct: 54 KGLW-QEAGAYLAEQAQN----LEKAGADCILVCTNTMHKVAPQIEDAITVPFIHIADAT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME--HTLI 256
AKE+ N++ ++ +L + FY+ +LQ EV++P+ A + H++I
Sbjct: 109 AKEILSQNIR--------KVALLGTAFTMEQDFYKARLQDREIEVIIPNDANRKIVHSII 160
>gi|377807839|ref|YP_004979031.1| aspartate racemase [Burkholderia sp. YI23]
gi|357939036|gb|AET92593.1| aspartate racemase [Burkholderia sp. YI23]
Length = 489
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 77/175 (44%), Gaps = 14/175 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE GA I +PC+ +H + + + +VP +++ + L+E L A +GV
Sbjct: 314 LEAGGADIIAIPCNTAHAFVERIQPYLAVPIVNMLTVTVRYLRE-TFPALRA-----VGV 367
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTL--IPALDALNRKDVEGA-RNLLRIA 277
LA + +G Y+ L+ +G ++P A + I + + GA + + A
Sbjct: 368 LATTGTVASGVYERALESQGLRQIVPGPALQARVMAAIYGKEGVKAGFTTGACQEDIAAA 427
Query: 278 LQVLLVRAVNTVILASDDMQDLLPPDD-----PLLKKCIDPMDALARSTIKWVKS 327
++ L+ V +IL ++ L P D + +DP D LAR + + +
Sbjct: 428 IEGLIAEGVEVIILGCTELPLLFPRTDFTGAGGARVRLVDPTDVLARQCVTYASA 482
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 10/134 (7%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
EK G +V+PC LSH + DE+ + + + E V ++ + + RIGV
Sbjct: 76 FEKRGVTTVVLPCFLSHTFIDELKANSPLQIVDMVEAVRSHVRR------KFPAVRRIGV 129
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARN----LLRI 276
LA G ++ F+V+ P A + A+ N R LLR
Sbjct: 130 LASAYARRKGLFETYFAAPEFDVIHPRLAEGRDLVNEAVYGPNGVKSGNLRGRPVELLRE 189
Query: 277 ALQVLLVRAVNTVI 290
A + L+ + N ++
Sbjct: 190 ACEDLIAQGANVIV 203
>gi|209520237|ref|ZP_03269006.1| aspartate racemase [Burkholderia sp. H160]
gi|209499312|gb|EDZ99398.1| aspartate racemase [Burkholderia sp. H160]
Length = 512
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 109/264 (41%), Gaps = 46/264 (17%)
Query: 79 QANTVGIVGGASVDSTLNLLGKLVQ---LSGEENDFPFLLCSDPLL---NKELLSHDRSS 132
+A +G+VGG +T++ +GK+V+ + +++ ++ +P + LL H
Sbjct: 254 RAFRLGVVGGIGPAATVDFMGKVVRNTPAARDQDHLRIIVEQNPQIPDRTAALLGHGDDP 313
Query: 133 FSSLN--CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVP 190
+L CK LE GA I +PC+ +H + + + VP
Sbjct: 314 TLALYAACKN--------------------LEDGGADLIAIPCNTAHAFVERIRPALRVP 353
Query: 191 FLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKAT 250
+++ C A L+E E +GVLA + L + Y++ L GF V P A
Sbjct: 354 VVNMPGCTADYLRETFPGLRE------VGVLATSGTLASRVYEQALDARGFVQVAPSAAA 407
Query: 251 MEHTLIPALDALNRKDVEGARNL---LRIALQVLLVRAVNTVILASDDMQDLLPPDDPLL 307
+ K + L A+ L+ + V ++LA ++ LL +P+L
Sbjct: 408 QARLMNAIYGPHGAKAGHTSGECCDDLAAAVDDLVAQGVQVIVLACTELPLLL--REPVL 465
Query: 308 K-------KCIDPMDALARSTIKW 324
+ +DP D LAR +++
Sbjct: 466 ACPGGRVVRLVDPTDVLARRCVEY 489
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 13/143 (9%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGS------ 214
EK G IV+PC LSH + DE+ +VP ++ ++ ++ G+
Sbjct: 71 FEKRGVDAIVLPCFLSHTFIDELSANLTVPVANIMTALSAHVRRTYPSARRNGARRNGAR 130
Query: 215 ---PLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL---DALNRKDVE 268
RIGVL AI +G ++ F+V+ P T + A+ + ++ +
Sbjct: 131 RNGARRIGVLTSAAIRASGLFERYFDAGQFDVLYPRNDTGFDCVTSAVYGDEGIHHGRLY 190
Query: 269 G-ARNLLRIALQVLLVRAVNTVI 290
G + LLR A L+ + V+ ++
Sbjct: 191 GRSVELLRAACADLVAQGVDVIV 213
>gi|86149571|ref|ZP_01067801.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88597747|ref|ZP_01100980.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
84-25]
gi|218561766|ref|YP_002343545.1| amino acid recemase [Campylobacter jejuni subsp. jejuni NCTC 11168
= ATCC 700819]
gi|317509641|ref|ZP_07967211.1| aspartate racemase family protein [Campylobacter jejuni subsp.
jejuni 305]
gi|384447395|ref|YP_005655446.1| putative aspartate racemase [Campylobacter jejuni subsp. jejuni
IA3902]
gi|403054889|ref|YP_006632294.1| amino acid recemase [Campylobacter jejuni subsp. jejuni NCTC
11168-BN148]
gi|407941552|ref|YP_006857192.1| aspartate racemase [Campylobacter jejuni subsp. jejuni PT14]
gi|415731130|ref|ZP_11473362.1| aspartate racemase family protein [Campylobacter jejuni subsp.
jejuni DFVF1099]
gi|419624048|ref|ZP_14157164.1| aspartate racemase [Campylobacter jejuni subsp. jejuni LMG 23218]
gi|419626529|ref|ZP_14159509.1| putative racemase [Campylobacter jejuni subsp. jejuni LMG 23223]
gi|419629994|ref|ZP_14162704.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 60004]
gi|419631054|ref|ZP_14163652.1| aspartate racemase [Campylobacter jejuni subsp. jejuni LMG 23264]
gi|419637862|ref|ZP_14170005.1| aspartate racemase [Campylobacter jejuni subsp. jejuni LMG 9879]
gi|419639908|ref|ZP_14171900.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 86605]
gi|419642122|ref|ZP_14173931.1| aspartate racemase [Campylobacter jejuni subsp. jejuni ATCC 33560]
gi|419647034|ref|ZP_14178478.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 53161]
gi|419647667|ref|ZP_14179024.1| aspartate racemase [Campylobacter jejuni subsp. jejuni LMG 9217]
gi|419650229|ref|ZP_14181453.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 2008-1025]
gi|419656611|ref|ZP_14187396.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 2008-988]
gi|419658440|ref|ZP_14189069.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1997-1]
gi|419661962|ref|ZP_14192276.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 2008-831]
gi|419663847|ref|ZP_14194033.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1997-4]
gi|419666500|ref|ZP_14196500.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1997-10]
gi|419671000|ref|ZP_14200678.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1997-14]
gi|419673380|ref|ZP_14202848.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 51037]
gi|419675895|ref|ZP_14205151.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 110-21]
gi|419677086|ref|ZP_14206246.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 87330]
gi|419680028|ref|ZP_14208964.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 87459]
gi|419683411|ref|ZP_14212112.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1213]
gi|419684772|ref|ZP_14213353.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1577]
gi|419689367|ref|ZP_14217659.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1854]
gi|419692197|ref|ZP_14220290.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1928]
gi|419695114|ref|ZP_14223013.1| aspartate racemase [Campylobacter jejuni subsp. jejuni LMG 23210]
gi|85839839|gb|EAQ57098.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88190051|gb|EAQ94027.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
84-25]
gi|112359472|emb|CAL34256.1| putative amino acid recemase [Campylobacter jejuni subsp. jejuni
NCTC 11168 = ATCC 700819]
gi|284925378|gb|ADC27730.1| putative aspartate racemase [Campylobacter jejuni subsp. jejuni
IA3902]
gi|315927766|gb|EFV07093.1| aspartate racemase family protein [Campylobacter jejuni subsp.
jejuni DFVF1099]
gi|315930862|gb|EFV09852.1| aspartate racemase family protein [Campylobacter jejuni subsp.
jejuni 305]
gi|380599602|gb|EIB19966.1| aspartate racemase [Campylobacter jejuni subsp. jejuni LMG 23218]
gi|380603211|gb|EIB23345.1| putative racemase [Campylobacter jejuni subsp. jejuni LMG 23223]
gi|380606649|gb|EIB26549.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 60004]
gi|380611597|gb|EIB31143.1| aspartate racemase [Campylobacter jejuni subsp. jejuni LMG 23264]
gi|380614640|gb|EIB33985.1| aspartate racemase [Campylobacter jejuni subsp. jejuni LMG 9879]
gi|380614812|gb|EIB34129.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 86605]
gi|380622192|gb|EIB40958.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 53161]
gi|380625311|gb|EIB43905.1| aspartate racemase [Campylobacter jejuni subsp. jejuni ATCC 33560]
gi|380627329|gb|EIB45730.1| aspartate racemase [Campylobacter jejuni subsp. jejuni LMG 9217]
gi|380628725|gb|EIB47018.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 2008-1025]
gi|380633426|gb|EIB51382.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1997-1]
gi|380634520|gb|EIB52396.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 2008-988]
gi|380639053|gb|EIB56564.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 2008-831]
gi|380642129|gb|EIB59416.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1997-4]
gi|380647714|gb|EIB64614.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1997-10]
gi|380649909|gb|EIB66578.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1997-14]
gi|380651076|gb|EIB67655.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 110-21]
gi|380653737|gb|EIB70137.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 51037]
gi|380655139|gb|EIB71466.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 87330]
gi|380656172|gb|EIB72447.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 87459]
gi|380658925|gb|EIB74917.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1213]
gi|380663180|gb|EIB78837.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1854]
gi|380666339|gb|EIB81884.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1577]
gi|380670360|gb|EIB85616.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1928]
gi|380679813|gb|EIB94652.1| aspartate racemase [Campylobacter jejuni subsp. jejuni LMG 23210]
gi|401780541|emb|CCK66233.1| amino acid recemase [Campylobacter jejuni subsp. jejuni NCTC
11168-BN148]
gi|407905390|gb|AFU42219.1| aspartate racemase [Campylobacter jejuni subsp. jejuni PT14]
Length = 231
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 29/170 (17%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEE----NDFPFLLCSDPLLNKE-LLSHDRSSFSSL 136
T+GI+GG S +ST+ + Q ++ N LL S E L S D+
Sbjct: 3 TIGIIGGMSFESTITYYKTINQAINDKLKSLNSAKILLYSVNFEEIENLQSQDKWQ---- 58
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+ + I+ +K LE AGA I++ + H DE+ + ++P LH+++
Sbjct: 59 ---------EAAQILTQCAKK---LELAGANFIIIATNTMHKVFDEIQQNINIPILHIAK 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
AK LK+ N++ +IG+L +T FY++ L E V+ P
Sbjct: 107 SSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKMLIEENISVITP 148
>gi|450035820|ref|ZP_21835225.1| putative amino acid recemase [Streptococcus mutans M21]
gi|449195035|gb|EMB96372.1| putative amino acid recemase [Streptococcus mutans M21]
Length = 230
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 23/170 (13%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGE--ENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
T+G++GG S +ST QL E + + L + LL S D +
Sbjct: 3 TIGLIGGMSWESTTTYY----QLINETIKKELGGLHSAKILL----YSVDFAEIEHYQAS 54
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G D + E L + LE+AGA IV+ + H ++ K ++P LH+++ A
Sbjct: 55 G-----DWAKSAEVLSQIAQKLEQAGADFIVICTNTMHKVAPQIQKQIAIPILHIAQATA 109
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
+ L E ++ ++G+L +T FY+EKL G EV++PD+A
Sbjct: 110 EALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQA 151
>gi|419652928|ref|ZP_14183972.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 2008-894]
gi|380627626|gb|EIB46000.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 2008-894]
Length = 231
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 29/170 (17%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEE----NDFPFLLCSDPLLNKE-LLSHDRSSFSSL 136
T+GI+GG S +ST+ + Q ++ N LL S E L S D+
Sbjct: 3 TIGIIGGMSFESTITYYKTINQAINDKLKSLNSAKILLYSVNFEEIENLQSQDKWQ---- 58
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+ + I+ +K LE AGA I++ + H DE+ + ++P LH+++
Sbjct: 59 ---------EAAQILTQCAKK---LELAGASFIIIATNTMHKVFDEIQQNINIPILHIAK 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
AK LK+ N++ +IG+L +T FY++ L E V+ P
Sbjct: 107 SSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKMLIEENISVITP 148
>gi|229164447|ref|ZP_04292374.1| Aspartate racemase [Bacillus cereus R309803]
gi|228619020|gb|EEK75919.1| Aspartate racemase [Bacillus cereus R309803]
Length = 238
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 111/249 (44%), Gaps = 25/249 (10%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
VGI+GG +T++L+ K++ + D + +++ + S G
Sbjct: 9 VGIIGGMGPLATVDLMNKIISYTPAMKDQDHI---------HIIADNYSQIPDRTTAILG 59
Query: 143 VQLDDS-LIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
+D + IV++ +R L+ AGA +V+ C+ +H ++ V + ++P LH+ A+
Sbjct: 60 KGIDPTPYIVQSAQR----LQNAGADFLVIACNTAHFFYKAVKRSVNIPILHMPLETARF 115
Query: 202 LKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDA 261
++E N + ++G+LA + + YQ Q+ +V+ PDK M+ ++ + A
Sbjct: 116 VQENNFR--------KVGLLATDGTIKTELYQNSCQNCRIDVIEPDKE-MQKKVMKGIYA 166
Query: 262 LNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARST 321
+ +++ L + L +I ++ +L + I+P + +A+
Sbjct: 167 IKSGNLKTGCLYLSMVADKLKESGAEAIIAGCTEVPLVLKSSKNIC--VINPTEIVAKVV 224
Query: 322 IKWVKSAEK 330
IK EK
Sbjct: 225 IKIANKTEK 233
>gi|365158458|ref|ZP_09354652.1| aspartate racemase [Bacillus sp. 7_6_55CFAA_CT2]
gi|363626732|gb|EHL77704.1| aspartate racemase [Bacillus sp. 7_6_55CFAA_CT2]
Length = 224
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 42/231 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAGCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I MPC+ +H++ +E+ + S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGASFIAMPCNTAHLYFEELQRSLSIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDK-ATME 252
+ + K + E + R+ +LA A + AG YQ+ + E + +K TM
Sbjct: 103 IVDETLKAIPE---------TAKRVALLATEATVQAGIYQDGIAKRNIEYIHYEKWQTMI 153
Query: 253 HTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPD 303
+ +I + + +VE A L AL V L V+T I+A D+ + D
Sbjct: 154 NQIITYIKS---GEVEEAHKLWN-ALVVQLKDEVDTAIIACTDLNVVASED 200
>gi|376295836|ref|YP_005167066.1| aspartate racemase [Desulfovibrio desulfuricans ND132]
gi|323458397|gb|EGB14262.1| aspartate racemase [Desulfovibrio desulfuricans ND132]
Length = 229
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 107/247 (43%), Gaps = 25/247 (10%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +S+L + Q E L + L+N S D + L C G
Sbjct: 2 KTIGLIGGMSWESSLEYYRVMNQAVKAE--LGGLHSARILMN----SVDFAPLRELMCAG 55
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
D + + L LE AGA +V+ + H D V + SVP +H++
Sbjct: 56 -----DWAGVGNRLADAARTLESAGAELMVIGTNTMHKVADRVAEAVSVPLVHIA----- 105
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALD 260
+A + AG R+ +L + FY +LQ GFEV++P+ + D
Sbjct: 106 ---DATAEAARAGGYARVALLGTIFTMEDDFYVGRLQDHGFEVLVPEAGDRKLVDRVIFD 162
Query: 261 ALNRKD-VEGAR-NLLRIALQVLLVRAVNTVILASDDMQDLLPPDD---PLLKKCIDPMD 315
L R + ++G+R LRI ++ L R VIL ++ L+ P D P L C +
Sbjct: 163 ELCRGEFLDGSRAEFLRI-IEELAARGAEAVILGCTEIGLLVRPGDTDVPTLDTCRIHAE 221
Query: 316 ALARSTI 322
+ R+ +
Sbjct: 222 TVVRAAL 228
>gi|341581273|ref|YP_004761765.1| aspartate racemase [Thermococcus sp. 4557]
gi|340808931|gb|AEK72088.1| aspartate racemase [Thermococcus sp. 4557]
Length = 229
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 29/182 (15%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
+GI+GG S ++T K +++S E+ +P + EL+ + +F G
Sbjct: 4 IGIIGGTSPEATCYYYKKYLEISREK--------FEPYVFPELIIYS-INFKEFIHNPNG 54
Query: 143 VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKEL 202
+ ++++ + LE AGA I + + HI E+ K SVP + + + + +E+
Sbjct: 55 WEGRKEILIKAAKA----LENAGAEIISLSANTPHIVFPEIQKAVSVPMVSIIDALIEEM 110
Query: 203 KEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDAL 262
+ ++ ++ +L +TA FY+ L+ GF+V+ P++ M D L
Sbjct: 111 ERRGVR--------KVLLLGTKTTMTADFYKNALREAGFDVITPNEGEM--------DEL 154
Query: 263 NR 264
NR
Sbjct: 155 NR 156
>gi|148926885|ref|ZP_01810563.1| putative amino acid recemase [Campylobacter jejuni subsp. jejuni
CG8486]
gi|145844462|gb|EDK21570.1| putative amino acid recemase [Campylobacter jejuni subsp. jejuni
CG8486]
Length = 193
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 29/170 (17%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEE----NDFPFLLCSDPLLNKE-LLSHDRSSFSSL 136
T+GI+GG S +ST+ + Q ++ N LL S E L S D+
Sbjct: 3 TIGIIGGMSFESTITYYKTINQAINDKLKSLNSAKILLYSVNFEEIENLQSQDKWQ---- 58
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+ + I+ +K LE AGA I++ + H DE+ + ++P LH+++
Sbjct: 59 ---------EAAQILTQCAKK---LELAGANFIIIATNTMHKVFDEIQQNINIPILHIAK 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
AK LK+ N++ +IG+L +T FY++ L E V+ P
Sbjct: 107 SSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKMLIEENISVITP 148
>gi|423411450|ref|ZP_17388570.1| aspartate racemase [Bacillus cereus BAG3O-2]
gi|423432764|ref|ZP_17409768.1| aspartate racemase [Bacillus cereus BAG4O-1]
gi|401107505|gb|EJQ15452.1| aspartate racemase [Bacillus cereus BAG3O-2]
gi|401114220|gb|EJQ22082.1| aspartate racemase [Bacillus cereus BAG4O-1]
Length = 224
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 42/231 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I MPC+ +H++ +E+ + S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGASFIAMPCNTAHLYFEELQRSLSIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDK-ATME 252
+ + K + E + R+ +LA A + AG YQ+ + E + +K TM
Sbjct: 103 IVDETLKAIPE---------TAKRVALLATEATVQAGIYQDGIAKRNIEYIHYEKWQTMI 153
Query: 253 HTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPD 303
+ +I + + +VE A L AL V L V+T I+A D+ + D
Sbjct: 154 NQIITYIKS---GEVEEAHKLWN-ALVVQLKDEVDTAIIACTDLNVVASED 200
>gi|421654078|ref|ZP_16094409.1| aspartate racemase [Acinetobacter baumannii Naval-72]
gi|408511928|gb|EKK13575.1| aspartate racemase [Acinetobacter baumannii Naval-72]
Length = 242
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 86/180 (47%), Gaps = 27/180 (15%)
Query: 82 TVGIVGGASVDST---LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG S +ST + K+V L + ++N S D ++L
Sbjct: 3 TIGLLGGMSWESTALYYQQINKMVH-----RKLGKLHSAKVIIN----SVDFEEIAALQA 53
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
KG Q + + E + LEKAGA CI++ + H ++ +VPF+H+++
Sbjct: 54 KGLW-QEAGAYLAEQAQN----LEKAGADCILVCTNTMHKVAPQIEDAITVPFIHIADAT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME--HTLI 256
AKE+ N++ ++ +L + FY+ +LQ G EV++P+ A + H++I
Sbjct: 109 AKEILSQNIR--------KVALLGTAFTMEQDFYKARLQDRGIEVIIPNDANRKIVHSII 160
>gi|420157707|ref|ZP_14664536.1| aspartate racemase [Clostridium sp. MSTE9]
gi|394755758|gb|EJF38946.1| aspartate racemase [Clostridium sp. MSTE9]
Length = 237
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 78/172 (45%), Gaps = 19/172 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +ST+ + ++ +E L S +L L S D + C+
Sbjct: 9 KTIGLIGGMSWESTVTYYQVINEIVNQELGG---LHSAKIL---LYSVDFAEIE--KCQA 60
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
G + I+ R LEKAGA IV+ + H +V +P LH++E A
Sbjct: 61 DGDWDKSADILSAAARN---LEKAGADFIVICTNTMHKVAPQVQSKIGIPILHIAEATAD 117
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
ELK N+ + +L +T FY+EKL G V++PD+ +E
Sbjct: 118 ELKRCNITT--------VALLGTKYTMTQDFYKEKLTRAGITVLIPDEQEIE 161
>gi|345888184|ref|ZP_08839296.1| hypothetical protein HMPREF0178_02070 [Bilophila sp. 4_1_30]
gi|345041004|gb|EGW45208.1| hypothetical protein HMPREF0178_02070 [Bilophila sp. 4_1_30]
Length = 238
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 95/230 (41%), Gaps = 30/230 (13%)
Query: 81 NTVGIVGGASVDSTLN---LLGKLVQ--LSGEENDFPFLLCSDPLLNKELLSHDRSSFSS 135
T+G++GG S +ST+ ++ +LVQ L G F C L S D +
Sbjct: 2 KTIGLIGGMSWESTVTYYRIINRLVQERLGG----FHSAKCI-------LHSVDFHEIEA 50
Query: 136 LNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195
+ G + L+ E R LE+AGA C+++ + H D V S+P LH++
Sbjct: 51 CQ-RAGDWERSGELLAEAARG----LERAGADCVLICTNTMHKVADAVQAATSLPLLHIA 105
Query: 196 ECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTL 255
E A EL+ A + +G+L + FY KL G V++P++
Sbjct: 106 ELTADELEAAGVST--------VGLLGTRYTMEQDFYTRKLVERGITVLIPEEDGRAFVN 157
Query: 256 IPALDALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
D L V E +R + L R VIL ++ L+ P D
Sbjct: 158 RVIFDELCLGTVSESSRRAFAAIIGGLTARGAQGVILGCTEIGLLVRPGD 207
>gi|315230222|ref|YP_004070658.1| aspartate racemase [Thermococcus barophilus MP]
gi|315183250|gb|ADT83435.1| aspartate racemase [Thermococcus barophilus MP]
Length = 226
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 101/222 (45%), Gaps = 21/222 (9%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
+GI+GG S +STL K +++S E+ +P EL+ + +F G
Sbjct: 4 IGIIGGMSPESTLYYYKKFIEISREK--------FEPYFYPELIIYS-INFREFKDNPEG 54
Query: 143 VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKEL 202
+ +++ + LE+AGA I + + SHI +V + +V + + + VA+E
Sbjct: 55 WEGRKKILINAAKA----LERAGAEVIGISANTSHIVFPDVQRAVNVEMVSIIDAVAEEA 110
Query: 203 KEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDAL 262
K ++ L L +T FY+E L+ +GF+V++P + +E + L
Sbjct: 111 KRRGLRKLLL--------LGTKTTMTMSFYKEALKEKGFDVIVPSENEIEEINRIIFEEL 162
Query: 263 NRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
+++ L+ + + + R + VIL ++ + P+D
Sbjct: 163 MFENLNSKLWLIELIERYVERREIEGVILGCTELPLAIKPED 204
>gi|149185927|ref|ZP_01864242.1| Aspartate racemase [Erythrobacter sp. SD-21]
gi|148830488|gb|EDL48924.1| Aspartate racemase [Erythrobacter sp. SD-21]
Length = 222
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 20/140 (14%)
Query: 115 LCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDD--SLIVENLRRKRVFLEKAGARCIVMP 172
+ S P+L + L +S + G D S++VE+ RR LE AGA+ IV+
Sbjct: 24 MASAPMLIESL------DYSRIAAAKGQDDWDGIASILVESARR----LEAAGAQGIVIA 73
Query: 173 CHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFY 232
+ H +D V +G S+P LH+++ V + EA + +L ++T FY
Sbjct: 74 ANTMHKVYDRVAEGISIPVLHIADAVGVAMAEAKCE--------NAALLGTRFVMTESFY 125
Query: 233 QEKLQHEGFEVVLPDKATME 252
+++L G +++ PD +E
Sbjct: 126 RQRLVSHGVDLLPPDPNDVE 145
>gi|372277543|ref|ZP_09513579.1| aspartate racemase [Pantoea sp. SL1_M5]
Length = 243
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 90/184 (48%), Gaps = 13/184 (7%)
Query: 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEV-CKGCSVPFLHVSECVAK 200
G ++DD+ ++ L++ L +A I +PC+L+H + E+ ++P LH+++ +
Sbjct: 54 GKKVDDNAMIATLQQGIAELVRAKVSLIAVPCNLAHCYFAEMKAVSFAIPLLHIADSALE 113
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVV-LPDKATMEHTLIPAL 259
+ P EA RI VLA L A FYQE+++ G E++ P M +LI +
Sbjct: 114 SV------PAEA---TRIAVLATEPTLEASFYQERIEASGKEIIDSPLLREMTTSLIGRV 164
Query: 260 DALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALAR 319
D G ++ + V+ + V +++A D+ L+ ++ +D +L+
Sbjct: 165 KKKGFHD-SGVQSEWMNLMSVVAILKVEALLIACTDLSPLI-TENTFSFVIVDTAASLSS 222
Query: 320 STIK 323
+TIK
Sbjct: 223 ATIK 226
>gi|218905985|ref|YP_002453819.1| amino acid racemase [Bacillus cereus AH820]
gi|218539387|gb|ACK91785.1| probable amino-acid racemase [Bacillus cereus AH820]
Length = 224
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 107/250 (42%), Gaps = 46/250 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFIDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I MPC+ +H++ +E+ + S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGASFIAMPCNTAHLYFEELQQSLSIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + K + E + R+ +LA A + +G YQ+ + E + ++ +
Sbjct: 103 IVDETLKAIPE---------TAKRVALLATEATVQSGIYQDGIAKRNIEYIHYEQ--WQE 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDP 313
++ + + +VE AR L AL + L V+T I+A D+ L D +D
Sbjct: 152 SINQIITYIKSGEVEEARELWS-ALVLQLKDEVDTAIIACTDLNVLASED------FVDS 204
Query: 314 MDALARSTIK 323
LA++ ++
Sbjct: 205 SQCLAKAVVR 214
>gi|116696357|ref|YP_841933.1| aspartate racemase [Ralstonia eutropha H16]
gi|113530856|emb|CAJ97203.1| aspartate racemase [Ralstonia eutropha H16]
Length = 240
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 29/168 (17%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSG---EENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+G++GG +T++ L ++V+L+ +++ P ++ P + DRS
Sbjct: 11 IGVLGGMGPLATVDFLDRVVRLTDAVRDQDHLPMVVAHLPQ------TPDRSR------- 57
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE-CV 198
+ D+L + L R L + +V+PC+ SH W+ ++ + P LH++ CV
Sbjct: 58 --SILAGDALPLPYLLRGIELLNRNQVGLVVIPCNTSHHWYAQLSAHSAAPILHIARICV 115
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
A P + GS + +LA L +G YQ L G V+P
Sbjct: 116 AA-------LPADTGS---VAILATRGALASGIYQAALDARGIAAVVP 153
>gi|325266150|ref|ZP_08132834.1| aspartate racemase [Kingella denitrificans ATCC 33394]
gi|324982380|gb|EGC18008.1| aspartate racemase [Kingella denitrificans ATCC 33394]
Length = 229
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 100/237 (42%), Gaps = 35/237 (14%)
Query: 81 NTVGIVGGASVDST----LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSL 136
NT+GI+GG S +ST L++ ++ Q+ G + P LL S F +
Sbjct: 2 NTLGIIGGMSPESTAAYYLHINRRVNQIKGGNHSAPLLLHS-------------VEFQHI 48
Query: 137 -NC-KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
+C K G SL+ ++ R L+ AGA+ I++ + H + SVPFLH+
Sbjct: 49 ADCQKSGDWPQAGSLLAQSART----LQNAGAQGILLATNTMHKVAVPIAAAVSVPFLHI 104
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHT 254
+ VA+ ++ +G+L + GFY + L G ++PD+A
Sbjct: 105 LDAVAQAVRVQGFAT--------VGLLGTRFTMQDGFYTDGLAERGIRTLVPDEAEQAEI 156
Query: 255 LIPALDALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD---PLL 307
D L + E ++ A+ L R VIL ++ L+ D PLL
Sbjct: 157 HRIIFDELCTGQIREDSKRRYLNAIAALAKRGAQAVILGCTEIGLLVQQGDTPVPLL 213
>gi|339502316|ref|YP_004689736.1| aspartate racemase [Roseobacter litoralis Och 149]
gi|338756309|gb|AEI92773.1| aspartate racemase-like protein [Roseobacter litoralis Och 149]
Length = 235
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 113/260 (43%), Gaps = 44/260 (16%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
VG++GG V++T+ L+ ++ + ++D P ++ +N ++ S R
Sbjct: 8 VGVLGGMGVEATIALMQRVHGATAGQDDQDHVPLIVD----MNPQVPSRIRHLIEKDGPD 63
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC-- 197
G V L V LE+AGA+ + MPC+ +H++ ++ + S+P LH+ E
Sbjct: 64 PGPV----------LAEMAVRLEQAGAKALAMPCNTAHLYAPQIKRSVSIPLLHMPELAC 113
Query: 198 --VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTL 255
A+ +K+ + +G+LA A + G +++ G + P++ E+ +
Sbjct: 114 AYAARSMKQGEI----------VGILASPATNSTGLFKDLCAQNGTVSIFPEE---ENDI 160
Query: 256 IPALDAL-NRKDVEGARNLLRIALQVLLVRAVNTVILASDDM----QDLLPPDDPLLKKC 310
+ A+ + N + +LL Q L R VI+ + Q L P
Sbjct: 161 LAAIRRIKNAGPGDADIDLLEREAQKLQSRGATCVIIGCSEFSLASQRLASP-----VPV 215
Query: 311 IDPMDALARSTIKWVKSAEK 330
+D +D LA + + + + K
Sbjct: 216 VDTLDVLAHAVVAFSGARAK 235
>gi|419588944|ref|ZP_14124757.1| aspartate racemase [Campylobacter coli 317/04]
gi|169640262|gb|ACA61184.1| aspartate racemase [Campylobacter coli]
gi|169640269|gb|ACA61190.1| putative aspartate racemase [Campylobacter coli]
gi|380568843|gb|EIA91302.1| aspartate racemase [Campylobacter coli 317/04]
Length = 231
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 29/170 (17%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEE----NDFPFLLCSDPLLNKE-LLSHDRSSFSSL 136
T+GI+GG S +ST+ + Q ++ N LL S E L S D+
Sbjct: 3 TIGIIGGMSFESTITYYKTINQAINDKLKSLNSAKILLYSVNFEEIENLQSQDKWQ---- 58
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+ + I+ +K LE AGA I++ + H DE+ + ++P LH+++
Sbjct: 59 ---------EAAQILTQCAKK---LELAGANFIIIATNTMHKVFDEIQQNINIPILHIAK 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
AK LK+ N++ +IG+L +T FY++ L E V+ P
Sbjct: 107 SSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKILIEENISVITP 148
>gi|350267675|ref|YP_004878982.1| amino acid racemase [Bacillus subtilis subsp. spizizenii TU-B-10]
gi|349600562|gb|AEP88350.1| putative amino acid racemase [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 227
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 109/253 (43%), Gaps = 48/253 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + K++ +L G ND +P ++ C P + H
Sbjct: 2 IGILAGMGPKSTSPFIDKVIDYCQKLYGASNDADYPHMMIYSCPTPFYADRPIDHGEMKR 61
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
+ ++ G V+L EK G I +PC+ +H++++E+ + SVP LH
Sbjct: 62 AIID---GAVKL----------------EKTGVDFIALPCNTAHVYYEEIQQALSVPLLH 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME- 252
+ E KE+ K + VL ++ + + YQ+ L+ G E V D
Sbjct: 103 IIEETIKEIPHPAKKAV---------VLGTDSTIQSVIYQKGLKANGQEAVHKDHWQQAV 153
Query: 253 HTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQ---DLLPPDDPLLKK 309
+ LI A+ N ++ + L + + + A + +I A D+ D + + P+
Sbjct: 154 NQLIAAIKQPNH--MQHTQALWQTLYEEISQHA-DIIISACTDLNAVLDHIQSEIPI--- 207
Query: 310 CIDPMDALARSTI 322
ID D LA+ST+
Sbjct: 208 -IDSSDCLAKSTV 219
>gi|283955529|ref|ZP_06373024.1| putative amino acid recemase [Campylobacter jejuni subsp. jejuni
1336]
gi|419622332|ref|ZP_14155566.1| aspartate racemase [Campylobacter jejuni subsp. jejuni LMG 23216]
gi|283792990|gb|EFC31764.1| putative amino acid recemase [Campylobacter jejuni subsp. jejuni
1336]
gi|380599668|gb|EIB20028.1| aspartate racemase [Campylobacter jejuni subsp. jejuni LMG 23216]
Length = 231
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 29/170 (17%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEE----NDFPFLLCSDPLLNKE-LLSHDRSSFSSL 136
T+GI+GG S +ST+ + Q ++ N LL S E L S D+
Sbjct: 3 TIGIIGGMSFESTITYYKTINQAINDKLKSLNSAKILLYSVNFEEIENLQSQDKWQ---- 58
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+ + I+ +K LE AGA I++ + H DE+ + ++P LH+++
Sbjct: 59 ---------EAAQILTQCAKK---LELAGANFIIIATNTMHKVFDEIQQNINIPILHIAK 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
AK LK+ N++ +IG+L +T FY++ L E V+ P
Sbjct: 107 SSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKILIEENISVITP 148
>gi|254169000|ref|ZP_04875839.1| aspartate racemase subfamily [Aciduliprofundum boonei T469]
gi|197622106|gb|EDY34682.1| aspartate racemase subfamily [Aciduliprofundum boonei T469]
Length = 225
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 32/175 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGE--ENDF-PFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+GIVGG + +S++ +++S E ENDF P ++ + + + F S
Sbjct: 4 IGIVGGTTPESSVYYYRNFIEVSRELFENDFYPEMI---------IFNLNFKKFKSAK-- 52
Query: 140 GGGVQLDDSLI--VENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
DD I +E ++ LE AGA I + + HI D + K + + + +
Sbjct: 53 ----DWDDREIYLLEIIKA----LEHAGAEIIALSANTPHIVFDSLAKKTNAKMISIIDA 104
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
+A+E K K L ++ +T+GFY+ KL+ GFEV++P++ E
Sbjct: 105 LAEEAKNKGYKKL--------LLMGTKTTMTSGFYKRKLEEHGFEVIVPEEYVDE 151
>gi|403050553|ref|ZP_10905037.1| aspartate racemase [Acinetobacter bereziniae LMG 1003]
Length = 229
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 27/173 (15%)
Query: 81 NTVGIVGGASVDST---LNLLGKLVQLS-GEENDFPFLLCSDPLLNKELLSHDRSSFSSL 136
T+G++GG S +ST L K VQ G+ + +L S E+L
Sbjct: 2 KTIGLLGGMSWESTDLYYQQLNKSVQQKLGKLHSAKVVLISVDFAEIEILQRQ------- 54
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
G+ D + L+ K V LE+AGA I++ + H + S+PF+H+++
Sbjct: 55 -----GLWEDAGI---YLKEKAVQLEQAGAEGILLCTNTMHKVASYIEHSISIPFIHIAD 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
AKE+ N++ ++G+L + FY+++L+ +G V++P +A
Sbjct: 107 ATAKEILNQNIR--------KVGLLGTRFTMEQDFYKQRLEQQGINVLIPHQA 151
>gi|383455230|ref|YP_005369219.1| aspartate racemase [Corallococcus coralloides DSM 2259]
gi|380734953|gb|AFE10955.1| aspartate racemase [Corallococcus coralloides DSM 2259]
Length = 230
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE+AGA +V+ + H ++ +PFLH++E A+E+ AN+K +G+
Sbjct: 71 LERAGAEALVLCTNTMHKLAPDIASAIRIPFLHIAEATAQEVLRANVKT--------VGL 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATME--HTLIPALDALNRKDVEGARNLLRIAL 278
L + FY+ +L G EV++P + H +I L + G+R + +
Sbjct: 123 LGTRYTMEQDFYKGRLAGSGLEVLVPTDEERQGVHDVIYQELCLGQVKA-GSRERYQRIM 181
Query: 279 QVLLVRAVNTVILASDDMQDLLPPDDP 305
+ L+ R +IL ++ L+ P D
Sbjct: 182 EGLVRRGAQGIILGCTEITLLVKPGDA 208
>gi|157414398|ref|YP_001481654.1| putative amino acid recemase [Campylobacter jejuni subsp. jejuni
81116]
gi|384440759|ref|YP_005657062.1| Putative aspartate racemase [Campylobacter jejuni subsp. jejuni M1]
gi|419654469|ref|ZP_14185403.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 2008-872]
gi|419665928|ref|ZP_14195982.1| putative racemase [Campylobacter jejuni subsp. jejuni 1997-7]
gi|419680266|ref|ZP_14209129.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 140-16]
gi|419687014|ref|ZP_14215430.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1798]
gi|419697617|ref|ZP_14225347.1| putative racemase [Campylobacter jejuni subsp. jejuni LMG 23211]
gi|157385362|gb|ABV51677.1| putative amino acid recemase [Campylobacter jejuni subsp. jejuni
81116]
gi|307747042|gb|ADN90312.1| Putative aspartate racemase [Campylobacter jejuni subsp. jejuni M1]
gi|380630989|gb|EIB49203.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 2008-872]
gi|380642274|gb|EIB59550.1| putative racemase [Campylobacter jejuni subsp. jejuni 1997-7]
gi|380660757|gb|EIB76695.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 140-16]
gi|380663167|gb|EIB78825.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 1798]
gi|380677537|gb|EIB92402.1| putative racemase [Campylobacter jejuni subsp. jejuni LMG 23211]
Length = 231
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 29/170 (17%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEE----NDFPFLLCSDPLLNKE-LLSHDRSSFSSL 136
T+GI+GG S +ST+ + Q ++ N LL S E L S D+
Sbjct: 3 TIGIIGGMSFESTITYYKTINQAINDKLKSLNSAKILLYSVNFEEIENLQSQDKWQ---- 58
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+ + I+ +K LE AGA I++ + H DE+ + ++P LH+++
Sbjct: 59 ---------EAAQILTQCAKK---LELAGANFIIIATNTMHKVFDEIQQNINIPILHIAK 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
AK LK+ N++ +IG+L +T FY++ L E V+ P
Sbjct: 107 SSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKILIEENISVITP 148
>gi|449999219|ref|ZP_21824389.1| putative amino acid recemase [Streptococcus mutans N29]
gi|449187140|gb|EMB88937.1| putative amino acid recemase [Streptococcus mutans N29]
Length = 230
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 23/171 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGE--ENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG S +ST + QL E + + L + LL S D +
Sbjct: 2 KTIGLIGGMSWESTTSYY----QLINETIKKELGGLHSAKILL----YSVDFAEIEHYQA 53
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
G + + ++ + +K LE+AGA IV+ + H ++ K ++P LH+++
Sbjct: 54 SGDWAK--SAKVLSQIAQK---LEQAGADFIVICTNTMHKVAPQIQKQIAIPILHIAQAT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
A+ L E ++ ++G+L +T FY+EKL G EV++PD+A
Sbjct: 109 AEALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQA 151
>gi|317486428|ref|ZP_07945255.1| aspartate racemase [Bilophila wadsworthia 3_1_6]
gi|316922338|gb|EFV43597.1| aspartate racemase [Bilophila wadsworthia 3_1_6]
Length = 238
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 95/230 (41%), Gaps = 30/230 (13%)
Query: 81 NTVGIVGGASVDSTL---NLLGKLVQ--LSGEENDFPFLLCSDPLLNKELLSHDRSSFSS 135
T+G++GG S +ST+ ++ +LVQ L G F C L S D +
Sbjct: 2 KTIGLIGGMSWESTVTYYQIVNRLVQERLGG----FHSAKCI-------LHSVDFHEIEA 50
Query: 136 LNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195
+ G + L+ E R LE+AGA C+++ + H D V S+P LH++
Sbjct: 51 CQ-RAGDWERSGELLAEAARG----LERAGADCVLICTNTMHKVADAVQAATSLPLLHIA 105
Query: 196 ECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTL 255
E A EL+ A + +G+L + FY KL G V++P++
Sbjct: 106 ELTADELEAAGVST--------VGLLGTRYTMEQDFYTRKLVERGITVLIPEEDGRAFVN 157
Query: 256 IPALDALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
D L V E +R + L R VIL ++ L+ P D
Sbjct: 158 RVIFDELCLGTVSESSRRAFAAIIGGLTARGAQGVILGCTEIGLLVRPGD 207
>gi|419621324|ref|ZP_14154623.1| aspartate racemase, partial [Campylobacter jejuni subsp. jejuni
51494]
gi|380596153|gb|EIB16857.1| aspartate racemase, partial [Campylobacter jejuni subsp. jejuni
51494]
Length = 229
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 29/170 (17%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEE----NDFPFLLCSDPLLNKE-LLSHDRSSFSSL 136
T+GI+GG S +ST+ + Q ++ N LL S E L S D+
Sbjct: 3 TIGIIGGMSFESTITYYKTINQAINDKLKSLNSAKILLYSVNFEEIENLQSQDKWQ---- 58
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+ + I+ +K LE AGA I++ + H DE+ + ++P LH+++
Sbjct: 59 ---------EAAQILTQCAKK---LELAGANFIIIATNTMHKVFDEIQQNINIPILHIAK 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
AK LK+ N++ +IG+L +T FY++ L E V+ P
Sbjct: 107 SSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKILIEENISVITP 148
>gi|228923509|ref|ZP_04086791.1| amino-acid racemase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228836147|gb|EEM81506.1| amino-acid racemase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
Length = 235
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 108/251 (43%), Gaps = 48/251 (19%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 13 IGILAGMGPKSTGPFVDTVVANCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 71
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I MPC+ +H++ +E+ S+P L+
Sbjct: 72 --------------KAIIEGAQK----LESTGASFIAMPCNTAHLYFEELQHSLSIPILN 113
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDK-ATME 252
+ + + + + N K R+ +LA A + AG YQ+ + E + +K TM
Sbjct: 114 IVDETLQAIPK-NTK--------RVALLATEATIQAGIYQDGIAKRNIEYIYYEKWQTMI 164
Query: 253 HTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCID 312
+ +I + + +VE AR L AL V L V T I+A D+ + D +D
Sbjct: 165 NQIITYIKS---GEVEEARKLWS-ALVVQLKDEVATAIIACTDLNVVASED------FVD 214
Query: 313 PMDALARSTIK 323
LA++ ++
Sbjct: 215 SSQCLAKAVVR 225
>gi|398797728|ref|ZP_10557047.1| aspartate racemase [Pantoea sp. GM01]
gi|398102275|gb|EJL92459.1| aspartate racemase [Pantoea sp. GM01]
Length = 229
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 11/156 (7%)
Query: 152 ENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLE 211
E L + LEK GA IV+ + H ++ S+P LH+++ A+ +++A +K
Sbjct: 62 EILAAAAISLEKGGADFIVLCTNTMHKVAQQITDAVSIPLLHIADATAQRIRQAGVK--- 118
Query: 212 AGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME--HTLIPALDALNRKDVEG 269
++G+LA + FY+ +L G EV++P+ A + H +I L E
Sbjct: 119 -----KVGLLATAFTMEQEFYKGRLHRSGIEVLVPEAAERKVVHDIIYQELCLGVIRNE- 172
Query: 270 ARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDP 305
+R R + L+V+ +IL ++ L+ P+D
Sbjct: 173 SRARYREIIAGLVVQGAEAIILGCTEITLLVKPEDA 208
>gi|387785224|ref|YP_006250320.1| putative amino acid recemase [Streptococcus mutans LJ23]
gi|449876455|ref|ZP_21782786.1| putative amino acid recemase [Streptococcus mutans S1B]
gi|449903223|ref|ZP_21792018.1| putative amino acid recemase [Streptococcus mutans M230]
gi|449911399|ref|ZP_21795117.1| putative amino acid recemase [Streptococcus mutans OMZ175]
gi|449943096|ref|ZP_21806293.1| putative amino acid recemase [Streptococcus mutans 11A1]
gi|450041002|ref|ZP_21837135.1| putative amino acid recemase [Streptococcus mutans T4]
gi|450077686|ref|ZP_21850603.1| putative amino acid recemase [Streptococcus mutans N3209]
gi|450180388|ref|ZP_21887212.1| putative amino acid recemase [Streptococcus mutans 24]
gi|379131625|dbj|BAL68377.1| putative amino acid recemase [Streptococcus mutans LJ23]
gi|449149705|gb|EMB53496.1| putative amino acid recemase [Streptococcus mutans 11A1]
gi|449198177|gb|EMB99302.1| putative amino acid recemase [Streptococcus mutans T4]
gi|449210906|gb|EMC11333.1| putative amino acid recemase [Streptococcus mutans N3209]
gi|449248364|gb|EMC46614.1| putative amino acid recemase [Streptococcus mutans 24]
gi|449252290|gb|EMC50273.1| putative amino acid recemase [Streptococcus mutans S1B]
gi|449258342|gb|EMC55926.1| putative amino acid recemase [Streptococcus mutans OMZ175]
gi|449261401|gb|EMC58877.1| putative amino acid recemase [Streptococcus mutans M230]
Length = 230
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 23/171 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGE--ENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG S +ST + QL E + + L + LL S D +
Sbjct: 2 KTIGLIGGMSWESTTSYY----QLINETIKKELGGLHSAKILL----YSVDFAEIEHYQA 53
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
G D + E L + LE+AGA IV+ + H ++ K ++P LH+++
Sbjct: 54 SG-----DWAKSAEVLSQIAQKLEQAGADFIVICTNTMHKVAPQIQKQIAIPILHIAQAT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
A+ + E ++ ++G+L +T FY+EKL G EV++PD+A
Sbjct: 109 AEAILENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQA 151
>gi|452959243|gb|EME64583.1| aspartate racemase [Amycolatopsis decaplanina DSM 44594]
Length = 237
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 18/183 (9%)
Query: 125 LLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVC 184
L S D + ++ +G + DD+ L R LE AGA +V+ + H D +
Sbjct: 40 LYSVDFAEIEAMQAEG---RWDDA--GRELNRAARGLEAAGADFVVLCTNTMHKVADRLT 94
Query: 185 KGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVV 244
G VP LH+++ A +K ++K R+G+L + FY+E+L G +V+
Sbjct: 95 DGLGVPLLHLADTTAAAIKAVDVK--------RVGLLGTGFTMAQPFYRERLAAHGLDVL 146
Query: 245 LP---DKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLP 301
+P D+ T+ + L ++ E +R R + L+ +I +++ L+
Sbjct: 147 VPGERDRETVHRVIYDEL--VHGVVTEDSRERYREVIARLVEEGAEGIIYGCTEIELLVG 204
Query: 302 PDD 304
P+D
Sbjct: 205 PED 207
>gi|168185453|ref|ZP_02620088.1| aspartate racemase [Clostridium botulinum C str. Eklund]
gi|169296186|gb|EDS78319.1| aspartate racemase [Clostridium botulinum C str. Eklund]
Length = 252
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 116/259 (44%), Gaps = 33/259 (12%)
Query: 80 ANTVGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSL 136
+ TVGI+GG +T LL K+++ + E D ++ +P + DR+S+
Sbjct: 3 SKTVGILGGMGPAATAELLKKIIEYTQVEKDQEHIHIIVEDNPKI------PDRTSY--- 53
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
G ++LI ++ L+ GA I+MPC+ +H + D++ K ++PF+++ +
Sbjct: 54 -ILGNSEDPTNALIETAMK-----LKLMGADIIIMPCNTAHFFLDKIQKVVNIPFINMID 107
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
VAK + L S RIG+LA Y+ ++ +V+ P + + ++
Sbjct: 108 EVAKYI-------LNICSDKRIGLLATQGTYKGKVYETCFKNYNIDVITP-REKYKDIIL 159
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-----KCI 311
+ + + +L++ L+ + + T++L ++ L +D + I
Sbjct: 160 DLIYQVKKGVKSFDESLVKRILKEFKDKNIKTIVLGCTELPILF--NDIRFNELKDFRFI 217
Query: 312 DPMDALARSTIKWVKSAEK 330
D LAR T+K E+
Sbjct: 218 SSTDILARETVKRALELER 236
>gi|421667667|ref|ZP_16107729.1| aspartate racemase [Acinetobacter baumannii OIFC087]
gi|410383613|gb|EKP36141.1| aspartate racemase [Acinetobacter baumannii OIFC087]
Length = 233
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LEKAGA CI++ + H ++ +VPF+H+++ AKE+ N++ ++ +
Sbjct: 62 LEKAGADCILVCTNTMHKVAPQIEDAITVPFIHIADATAKEILSQNIR--------KVAL 113
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATME--HTLI 256
L L FY+ +LQ G EV++P+ A + H++I
Sbjct: 114 LGTAFTLEQDFYKARLQDHGIEVIIPNDANRKIVHSII 151
>gi|415744811|ref|ZP_11474725.1| aspartate racemase family protein [Campylobacter jejuni subsp.
jejuni 327]
gi|315932541|gb|EFV11475.1| aspartate racemase family protein [Campylobacter jejuni subsp.
jejuni 327]
Length = 231
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 29/170 (17%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEE----NDFPFLLCSDPLLNKE-LLSHDRSSFSSL 136
T+GI+GG S +ST+ + Q ++ N LL S E L S D+
Sbjct: 3 TIGIIGGMSFESTITYYKTINQAINDKLKSLNSAKILLYSVNFEEIENLQSQDKWQ---- 58
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+ + I+ +K LE AGA I++ + H DE+ + ++P LH+++
Sbjct: 59 ---------EAAQILTQCAKK---LELAGANFIIIATNTMHKVFDEIQQNINIPILHIAK 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
AK LK+ N++ +IG+L +T FY++ L E V+ P
Sbjct: 107 SSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKILIEENISVITP 148
>gi|392392806|ref|YP_006429408.1| aspartate racemase [Desulfitobacterium dehalogenans ATCC 51507]
gi|390523884|gb|AFL99614.1| aspartate racemase [Desulfitobacterium dehalogenans ATCC 51507]
Length = 233
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 13/150 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE AGA CIV+ + H DE+ G +P LH+++ AK+ N+K IG+
Sbjct: 71 LEAAGAECIVLCTNTMHKVADEIQAGMRIPLLHIADITAKQALTHNIKT--------IGL 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEHTLIPALDALNRKDVEGARNLLRIA 277
L + FY +L+ +G +V+ P D+ + + L L E +RN +
Sbjct: 123 LGTRYTMEQDFYTSRLETQGLKVLTPEEGDRGIVNEVIYHEL-CLGEISNE-SRNQFKRM 180
Query: 278 LQVLLVRAVNTVILASDDMQDLLPPDDPLL 307
+Q L+ + ++L ++ L+ +D +
Sbjct: 181 IQSLVEQGAEGIVLGCTEIGLLIKQEDSFV 210
>gi|253687565|ref|YP_003016755.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum
PC1]
gi|251754143|gb|ACT12219.1| aspartate racemase [Pectobacterium carotovorum subsp. carotovorum
PC1]
Length = 235
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 105/235 (44%), Gaps = 35/235 (14%)
Query: 80 ANTVGIVGGASVDSTL---NLLGKLV--QLSGEENDFPFLLCSDPLLNKELLSHDRSSFS 134
+ T+G++GG S +ST+ ++ + V QL G L S ++ L S D
Sbjct: 3 SKTLGLIGGMSWESTIPYYRIINEYVKGQLGG--------LHSAKII---LHSVDFHEIE 51
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
L +G Q + ++ N+ V L +AGA IV+ + H D+V + C +P LH+
Sbjct: 52 RLQAQGDWEQ--SAAVLGNIA---VGLRQAGADAIVICTNTMHKVADDVERACQLPLLHI 106
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEH 253
++ LK+ +K ++G+L + FY++++Q G EVV+PD E
Sbjct: 107 ADATGASLKQHGLK--------KVGLLGTRYTMEQDFYRQRIQERFGVEVVVPDHEGKEI 158
Query: 254 TLIPALDAL---NRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDP 305
D L N DV +R R +Q L + +IL ++ L+ D
Sbjct: 159 VNRIIYDELCLGNINDV--SRQAYRDIIQQLEQQGAEGIILGCTEIPLLIGDQDA 211
>gi|326793009|ref|YP_004310830.1| aspartate racemase [Clostridium lentocellum DSM 5427]
gi|326543773|gb|ADZ85632.1| aspartate racemase [Clostridium lentocellum DSM 5427]
Length = 229
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 21/172 (12%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEE-NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +ST+ + Q+ E F C L S D + KG
Sbjct: 3 TIGMIGGMSWESTVTYYQMVNQVVKERLGGFHSAKCI-------LYSVDFDEIEACQAKG 55
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
+ + S E L V LE++GA I++ + H D++ ++P LH++E A
Sbjct: 56 ---EWEKS--GEILADAAVNLERSGADFIIICTNTMHKVADQIQAKVNIPILHIAEVTAG 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
LKE ++ ++ +L + FY+ KL +G EV++P++A +E
Sbjct: 111 RLKENTIE--------KVALLGTKYTMQQDFYKSKLIEQGIEVLIPNEADIE 154
>gi|225574246|ref|ZP_03782856.1| hypothetical protein RUMHYD_02310 [Blautia hydrogenotrophica DSM
10507]
gi|225038536|gb|EEG48782.1| aspartate racemase [Blautia hydrogenotrophica DSM 10507]
Length = 236
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 22/217 (10%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFL-LCSDPLLNKELLSHDRSSFSSLNCK 139
T+GIVGG +T +L K++Q++ + D + +C D N + DR++ ++ K
Sbjct: 3 KTIGIVGGMGPLATCDLYQKIIQVTQADKDQEHVRVCIDG--NTRI--PDRTA--AILHK 56
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G D L + + V LE GA ++MPC+ +H ++ ++ +PFL++ E
Sbjct: 57 G-----RDPL--PQMIKSAVRLEGMGADVLIMPCNTAHYFYKKLLPFVDIPFLNMLE--- 106
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
E +A +K + G+LA + + +G Y++ Q G + LP K E +
Sbjct: 107 -ETADAAVKM----GITKAGLLATDGTVKSGVYEKAFQERGISLELPAKEEQESVMELIY 161
Query: 260 DALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
D + + A+ LL R ++L ++
Sbjct: 162 DGVKAGNYSLDTKKFERAMDKLLQRGAQVLVLGCTEL 198
>gi|254166829|ref|ZP_04873683.1| aspartate racemase subfamily [Aciduliprofundum boonei T469]
gi|289596545|ref|YP_003483241.1| aspartate racemase [Aciduliprofundum boonei T469]
gi|197624439|gb|EDY37000.1| aspartate racemase subfamily [Aciduliprofundum boonei T469]
gi|289534332|gb|ADD08679.1| aspartate racemase [Aciduliprofundum boonei T469]
Length = 225
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 32/175 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGE--ENDF-PFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+GIVGG + +S++ +++S E ENDF P ++ + + + F S
Sbjct: 4 IGIVGGTTPESSVYYYRNFIEVSRELFENDFYPEMI---------IFNLNFKKFKSAK-- 52
Query: 140 GGGVQLDDSLI--VENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
DD I +E ++ LE AGA I + + HI D + K + + + +
Sbjct: 53 ----DWDDREIYLLEIIKA----LEHAGAEIIALSANTPHIVFDSLAKKTNAKMISIIDA 104
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
+A+E K K L ++ +T+GFY+ KL+ GFEV++P++ E
Sbjct: 105 LAEEAKNKGYKKL--------LLMGTKTTMTSGFYKRKLEEHGFEVIVPEEYVDE 151
>gi|295676130|ref|YP_003604654.1| aspartate racemase [Burkholderia sp. CCGE1002]
gi|295435973|gb|ADG15143.1| aspartate racemase [Burkholderia sp. CCGE1002]
Length = 519
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 118/270 (43%), Gaps = 38/270 (14%)
Query: 78 NQANTVGIVGGASVDSTLNLLGKLVQ---LSGEENDFPFLLCSDPLLNKELLSHDRSSFS 134
+A +G+VGG +T++ +GK+V+ + +++ ++ +P + DR++
Sbjct: 253 QRAFRLGVVGGIGPAATVDFMGKVVRNTPAARDQDHIRIMVEQNPQIP------DRTA-- 304
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
+L +G DD + K LE+ GA I +PC+ +H + + + VP +++
Sbjct: 305 ALLGRG-----DDPTLALYAACK--TLEEGGADLIAIPCNTAHAFVERLQPALRVPIVNM 357
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHT 254
C A L+E E +GVLA + L + Y++ L G + P A
Sbjct: 358 LTCTADYLRETFPGLRE------VGVLATSGTLASRVYEQVLDARGLAQIAPSAAAQARL 411
Query: 255 LIPALDALNRKDVEGARNL---LRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK--- 308
+ K + L A+ L+ + V ++LA ++ LL +P+L
Sbjct: 412 MNAIYGPRGAKAGHTSGECCDDLAAAVDDLVAQGVQVIVLACTELPLLL--REPVLASPG 469
Query: 309 ----KCIDPMDALARSTIKWV--KSAEKGT 332
+ +DP D LAR + + SA +GT
Sbjct: 470 GRVVRLVDPTDVLARRCVAYALGDSAARGT 499
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 17/145 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGS------ 214
EK G IV+PC LSH + DE+ +VP ++ +++ ++ G+
Sbjct: 71 FEKRGVDAIVLPCFLSHTFIDELTTNVTVPVANIMTALSEHVRCTYPSARRGGARRDGAR 130
Query: 215 ---PLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGAR 271
RIGVL AI G ++ + F+V P T + A+ + + R
Sbjct: 131 RDGARRIGVLTSAAIRANGLFERYFEAGQFDVCYPRNDTDFDCVTSAV--FGTEGIRAGR 188
Query: 272 ------NLLRIALQVLLVRAVNTVI 290
LLR A L+ + V+ ++
Sbjct: 189 LHGRPVELLRTACADLVAQGVDVIV 213
>gi|228948505|ref|ZP_04110786.1| amino-acid racemase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228811185|gb|EEM57525.1| amino-acid racemase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
Length = 224
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE GA I MPC+ +H++ +E+ + S+P L++ + K + E + R+ +
Sbjct: 70 LESTGASFIAMPCNTAHLYFEELQQSLSIPILNIVDETLKAIPE---------TAKRVAL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQV 280
LA A + AG YQ+ + E + ++ + ++ + + +VE AR L AL +
Sbjct: 121 LATEATVQAGIYQDGIAKRNIEYIHYEQ--WQESINQIITYIKSGEVEEARELWS-ALVL 177
Query: 281 LLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIK 323
L V+T I+A D+ + D +D LA++ ++
Sbjct: 178 QLKDEVDTAIIACTDLNVVASED------FVDSAQCLAKAVVR 214
>gi|392961931|ref|ZP_10327378.1| aspartate racemase [Pelosinus fermentans DSM 17108]
gi|421056214|ref|ZP_15519141.1| aspartate racemase [Pelosinus fermentans B4]
gi|421058031|ref|ZP_15520770.1| aspartate racemase [Pelosinus fermentans B3]
gi|421065643|ref|ZP_15527363.1| aspartate racemase [Pelosinus fermentans A12]
gi|421072807|ref|ZP_15533911.1| aspartate racemase [Pelosinus fermentans A11]
gi|392438630|gb|EIW16453.1| aspartate racemase [Pelosinus fermentans B4]
gi|392445234|gb|EIW22566.1| aspartate racemase [Pelosinus fermentans A11]
gi|392452689|gb|EIW29594.1| aspartate racemase [Pelosinus fermentans DSM 17108]
gi|392458439|gb|EIW34973.1| aspartate racemase [Pelosinus fermentans A12]
gi|392461633|gb|EIW37805.1| aspartate racemase [Pelosinus fermentans B3]
Length = 233
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 108/249 (43%), Gaps = 29/249 (11%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFL-LCSDPLLNKELLSHDRSSFSSLNCKG 140
++GI+GG +T +L K++ ++ + D + +C D N + ++ G
Sbjct: 4 SIGIIGGMGSLATCDLFKKIIDMTDAKCDQEHIHICID--CNTNIPDRTKAIL------G 55
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
GG + + R V L+ GA ++MPC+ +H ++D++ +P L++ + +
Sbjct: 56 GGKDP-----IPEMVRSGVRLQSMGADVLIMPCNTAHYFYDKITPFFDIPLLNMLKETVQ 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALD 260
E++ ++ +IG+LA + + + Y L G ++V+P + +
Sbjct: 111 EIQRRKIR--------KIGLLATDGTIKSRVYHTALADAGIDLVIPSPIGQRSVMDIIYN 162
Query: 261 ALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQ---DLLPPDDPLLKKCIDPMDAL 317
+ + N A+ L + ++L ++ +L + P IDP L
Sbjct: 163 GIKASNRNINLNQFYGAIDELFEKGAEILVLGCTELSVAFELFHIERP----SIDPTSVL 218
Query: 318 ARSTIKWVK 326
A + I++V+
Sbjct: 219 AAAAIRFVE 227
>gi|449892228|ref|ZP_21788346.1| putative amino acid recemase [Streptococcus mutans SF12]
gi|449256282|gb|EMC54112.1| putative amino acid recemase [Streptococcus mutans SF12]
Length = 230
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 23/170 (13%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGE--ENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
T+G++GG S +ST + QL E + + L + LL S D +
Sbjct: 3 TIGLIGGMSWESTTSYY----QLINETIKKELGGLHSAKILL----YSVDFAEIEHYQAS 54
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G D + E L + LE+AGA IV+ + H ++ K ++P LH+++ A
Sbjct: 55 G-----DWAKSAEVLSQIAQKLEQAGADFIVICTNTMHKVAPQIQKQIAIPILHIAQATA 109
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
+ + E ++ ++G+L +T FY+EKL G EV++PD+A
Sbjct: 110 EAILENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQA 151
>gi|14520631|ref|NP_126106.1| aspartate racemase [Pyrococcus abyssi GE5]
gi|5457847|emb|CAB49337.1| racD-2 aspartate racemase [Pyrococcus abyssi GE5]
gi|380741161|tpe|CCE69795.1| TPA: aspartate racemase [Pyrococcus abyssi GE5]
Length = 232
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 80/171 (46%), Gaps = 21/171 (12%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
+GI+GG + +STL K +++S E+ + + EL+ + +F G
Sbjct: 4 IGIIGGTTPESTLYYYQKYIEISREK--------FEKYVYPELIIYS-INFREFFQNPEG 54
Query: 143 VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKEL 202
+ +++ + LE+AGA I + HI D+V + +VP + + + VA+E+
Sbjct: 55 WEGRKKILINAAKA----LERAGAELIAFSANTPHIVFDDVQREVNVPMVSIIDAVAEEV 110
Query: 203 KEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+K R+ +L ++A FY + L+ +G EVV+P+ E
Sbjct: 111 IRRGVK--------RVLLLGTKTTMSADFYIKALEKKGLEVVVPNDEEKEE 153
>gi|407710361|ref|YP_006794225.1| aspartate racemase [Burkholderia phenoliruptrix BR3459a]
gi|407239044|gb|AFT89242.1| aspartate racemase [Burkholderia phenoliruptrix BR3459a]
Length = 483
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 112/259 (43%), Gaps = 32/259 (12%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+G+VGG +T++ L K+V+ + D L+ +P + DR+ N
Sbjct: 244 LGVVGGVGPAATVDFLDKIVRNTPARRDQDHVKLLVEQNPQIP------DRTE----NLI 293
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G G SL R LE+ GA I +PC+ +H + + + VP +++
Sbjct: 294 GEGADPTVSLYATCKR-----LEEGGADIIAIPCNTAHAFVERIQPYLRVPIVNMLTETV 348
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTL--IP 257
+ + E + +IGVLA + + +G Y++ L+ +G + + P+ A + I
Sbjct: 349 RYVHE------HYPAQRKIGVLATSGTMASGVYEKALEAQGLQQIAPEPALQSRVMQAIY 402
Query: 258 ALDALNRKDVEGA-RNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-----KCI 311
+ GA + + A++ L+ V ++L ++ LLP + + I
Sbjct: 403 GKQGVKAGFTAGACHDDIAAAVEGLIDEGVEVIVLGCTELPLLLPHAEFVGSGGARVTLI 462
Query: 312 DPMDALARSTIKWVKSAEK 330
DP D LAR I + +A +
Sbjct: 463 DPTDVLARRCIAYALAARE 481
>gi|229175471|ref|ZP_04302982.1| amino-acid racemase [Bacillus cereus MM3]
gi|228608003|gb|EEK65314.1| amino-acid racemase [Bacillus cereus MM3]
Length = 224
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 105/250 (42%), Gaps = 46/250 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTAPFVDTVVAGCQTIYGAKHDIDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE G I MPC+ +H++ +E+ + S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGVSFIAMPCNTAHLYFEELQRSISIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + + + E K + +LA A + AG YQ+ + E + +K +
Sbjct: 103 IVDETLQAIPETAKK---------VTLLATEATIQAGIYQDGITKRNIEYIHHEK--WQE 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDP 313
+ + + +VE AR L AL + L V+TVI+A D+ + D +D
Sbjct: 152 MISQIITFIKSGEVEEARELWN-ALVLQLREEVDTVIIACTDLNVVASED------FVDS 204
Query: 314 MDALARSTIK 323
LA++ ++
Sbjct: 205 SQCLAKAVVR 214
>gi|227510557|ref|ZP_03940606.1| aspartate racemase [Lactobacillus brevis subsp. gravesensis ATCC
27305]
gi|227190209|gb|EEI70276.1| aspartate racemase [Lactobacillus brevis subsp. gravesensis ATCC
27305]
Length = 242
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 7/102 (6%)
Query: 169 IVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILT 228
V+PC+ +H D++ SVP LH+ K++K + S R+G++A L
Sbjct: 80 FVIPCNTAHYSFDDLQALTSVPILHMPRETVKDIKH------DVPSAKRVGLIATRGTLH 133
Query: 229 AGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKD-VEG 269
G Y +++H G+++V PD+ T T+ D + K+ V+G
Sbjct: 134 DGIYDREIRHAGYDLVKPDEKTANQTMELIYDDIKEKNQVDG 175
>gi|449883682|ref|ZP_21785322.1| putative amino acid recemase [Streptococcus mutans SA38]
gi|449925928|ref|ZP_21800500.1| putative amino acid recemase [Streptococcus mutans 4SM1]
gi|449931493|ref|ZP_21802406.1| putative amino acid recemase [Streptococcus mutans 3SN1]
gi|450066075|ref|ZP_21845772.1| putative amino acid recemase [Streptococcus mutans NLML9]
gi|450092846|ref|ZP_21856287.1| putative amino acid recemase [Streptococcus mutans W6]
gi|450111924|ref|ZP_21862920.1| putative amino acid recemase [Streptococcus mutans SM6]
gi|450148094|ref|ZP_21875451.1| putative amino acid recemase [Streptococcus mutans 14D]
gi|450164062|ref|ZP_21881099.1| putative amino acid recemase [Streptococcus mutans B]
gi|449161065|gb|EMB64282.1| putative amino acid recemase [Streptococcus mutans 4SM1]
gi|449162590|gb|EMB65720.1| putative amino acid recemase [Streptococcus mutans 3SN1]
gi|449209233|gb|EMC09765.1| putative amino acid recemase [Streptococcus mutans NLML9]
gi|449217848|gb|EMC17879.1| putative amino acid recemase [Streptococcus mutans W6]
gi|449223128|gb|EMC22832.1| putative amino acid recemase [Streptococcus mutans SM6]
gi|449236336|gb|EMC35259.1| putative amino acid recemase [Streptococcus mutans 14D]
gi|449242306|gb|EMC40899.1| putative amino acid recemase [Streptococcus mutans B]
gi|449249554|gb|EMC47667.1| putative amino acid recemase [Streptococcus mutans SA38]
Length = 230
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 19/169 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +ST + + + +E L S +L L S D + G
Sbjct: 2 KTIGLIGGMSWESTTSYYQFINETIKKELGG---LHSAKIL---LYSVDFAEIEHYQASG 55
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
D + E L + LE+AGA IV+ + H ++ K ++P LH+++ A+
Sbjct: 56 -----DWAKSAEVLSQIAQKLEQAGADFIVICTNTMHKVAPQIQKQIAIPILHIAQATAE 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
L E ++ ++G+L +T FY+EKL G EV++PD+A
Sbjct: 111 ALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQA 151
>gi|420246718|ref|ZP_14750151.1| aspartate racemase [Burkholderia sp. BT03]
gi|398073628|gb|EJL64797.1| aspartate racemase [Burkholderia sp. BT03]
Length = 497
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 118/257 (45%), Gaps = 34/257 (13%)
Query: 83 VGIVGGASVDSTLNLLGKLVQ---LSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+G+VGG +T++ + K+V+ + +++ ++ +P + DR+ +
Sbjct: 227 LGVVGGVGPAATVDFMHKVVRNTPAARDQDHIKVIVEQNPQIP------DRTD----HLT 276
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G G D +L + +K LE GA I +PC+ +H + + VP +++ A
Sbjct: 277 GDGA--DPTLALYATCKK---LEDGGADLIAIPCNTAHAFIGPIEARLRVPIINMMNVTA 331
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
L+ A ++ RIG+LA + + +G Y+ L+ G VLP A +
Sbjct: 332 DYLRTA-FPAVD-----RIGLLATDGTIASGVYRTALEARGMTQVLPPLAMQARVMNAIY 385
Query: 260 DALNRK----DVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKK-----C 310
A K + E A +++ A++ LL++ V ++LA ++ L P + +K
Sbjct: 386 GARGVKAGFTNGECADDII-AAVESLLLQQVEVILLACTELPLLFPQAATVTRKGRSAHL 444
Query: 311 IDPMDALARSTIKWVKS 327
+DP D LAR +++ +
Sbjct: 445 VDPTDVLARCCVEFARG 461
>gi|86151206|ref|ZP_01069421.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
260.94]
gi|315123688|ref|YP_004065692.1| aspartate racemase [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
gi|85841553|gb|EAQ58800.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
260.94]
gi|315017410|gb|ADT65503.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 230
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 29/170 (17%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEE----NDFPFLLCSDPLLNKE-LLSHDRSSFSSL 136
T+GI+GG S +ST+ + Q ++ N LL S E L S D+
Sbjct: 3 TIGIIGGMSFESTITYYKTINQAINDKLKSLNSAKILLYSVNFEEIENLQSQDKWQ---- 58
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+ + I+ +K LE AGA I++ + H DE+ + ++P LH+ +
Sbjct: 59 ---------EAAQILTQCAKK---LELAGANFIIITTNTMHKVFDEIQQNINIPILHIVK 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
AK LK+ N++ +IG+L +T FY++ L E V+ P
Sbjct: 107 SSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKMLIEENISVITP 148
>gi|423071601|ref|ZP_17060375.1| hypothetical protein HMPREF9177_01692 [Streptococcus intermedius
F0413]
gi|355364075|gb|EHG11810.1| hypothetical protein HMPREF9177_01692 [Streptococcus intermedius
F0413]
Length = 230
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 23/170 (13%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGE--ENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
T+G++GG S +ST + QL E + + L + LL S D +
Sbjct: 3 TIGLIGGMSWESTADYY----QLINETIKKELGGLQSAKILL----YSVDFAEIEHYQAS 54
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G D + E L + LE+AGA IV+ + H ++ K ++P LH+++ A
Sbjct: 55 G-----DWAKSAEVLSQIAQKLEQAGADFIVICTNTMHKVDPQIQKQIAIPILHIAQATA 109
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
+ L E ++ ++G L +T FY+EKL G EV++PD+A
Sbjct: 110 EALLENGIQ--------KVGPLGTKYTMTQDFYKEKLLEAGLEVLIPDQA 151
>gi|229152950|ref|ZP_04281132.1| amino-acid racemase [Bacillus cereus m1550]
gi|228630563|gb|EEK87210.1| amino-acid racemase [Bacillus cereus m1550]
Length = 235
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 95/223 (42%), Gaps = 40/223 (17%)
Query: 83 VGIVGGASVDSTLNLLGKLVQL------SGEENDFPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + + + DFP ++ C P + H+
Sbjct: 13 IGILAGMGPKSTGPFVDTVVAMCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHETMK- 71
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE G I MPC+ +H++ +E+ + S+P L+
Sbjct: 72 --------------KAIIEGAQK----LESTGVDFIAMPCNTAHLYFEELQRSLSIPILN 113
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + K + E N K R+ +LA A + AG YQ+ + E + +K +
Sbjct: 114 IVDETLKTIPE-NTK--------RVALLATEATIQAGIYQDGIIKRNIEYIHHEK--WQE 162
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
+ + ++ +VE AR L L + L V+T I+A D+
Sbjct: 163 MISQIITSIKSGEVEEARELWN-TLVLQLKDEVDTAIIACTDL 204
>gi|150018009|ref|YP_001310263.1| aspartate racemase [Clostridium beijerinckii NCIMB 8052]
gi|149904474|gb|ABR35307.1| aspartate racemase [Clostridium beijerinckii NCIMB 8052]
Length = 229
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAG 213
L + LEKAGA IV+ + H D+V + S+P LH++E A+ LK N+
Sbjct: 64 LSEAALTLEKAGADFIVICTNTMHKVADKVQEAISIPILHIAEVTAQVLKAENIT----- 118
Query: 214 SPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
+I +L + FY+ KL +G V++PDK +E
Sbjct: 119 ---KIALLGTKYTMEQDFYKSKLIEDGIRVLIPDKEDIE 154
>gi|116513165|ref|YP_812072.1| aspartate racemase [Lactococcus lactis subsp. cremoris SK11]
gi|125625258|ref|YP_001033741.1| RacD protein [Lactococcus lactis subsp. cremoris MG1363]
gi|385839561|ref|YP_005877191.1| Aspartate racemase [Lactococcus lactis subsp. cremoris A76]
gi|389855646|ref|YP_006357890.1| aspartate racemase [Lactococcus lactis subsp. cremoris NZ9000]
gi|414075222|ref|YP_007000439.1| Aspartate racemase [Lactococcus lactis subsp. cremoris UC509.9]
gi|116108819|gb|ABJ73959.1| Aspartate racemase [Lactococcus lactis subsp. cremoris SK11]
gi|124494066|emb|CAL99067.1| RacD protein [Lactococcus lactis subsp. cremoris MG1363]
gi|300072068|gb|ADJ61468.1| aspartate racemase [Lactococcus lactis subsp. cremoris NZ9000]
gi|358750789|gb|AEU41768.1| Aspartate racemase [Lactococcus lactis subsp. cremoris A76]
gi|413975142|gb|AFW92606.1| Aspartate racemase [Lactococcus lactis subsp. cremoris UC509.9]
Length = 240
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 19/111 (17%)
Query: 167 RCIVMPCHLSHIWHDEVCKGCSVPFLHVS----ECVAKELKEANMKPLEAGSPLRIGVLA 222
+ V+PC+ +H + DE+ K +P LH+ + + + +A R+ VLA
Sbjct: 78 KFFVVPCNTAHYYFDEMQKATEIPILHMPRIAVDSIGRHFSDAK----------RVAVLA 127
Query: 223 KNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNL 273
+ G Y+E L+ +G+E V+PD+ E ++ L ++V+ RNL
Sbjct: 128 TEGTILTGVYREALEEQGYEAVIPDEELQE-----KVNRLIYQEVKENRNL 173
>gi|217962242|ref|YP_002340812.1| putative amino-acid racemase [Bacillus cereus AH187]
gi|229141490|ref|ZP_04270026.1| amino-acid racemase [Bacillus cereus BDRD-ST26]
gi|375286756|ref|YP_005107195.1| aspartate racemase family protein [Bacillus cereus NC7401]
gi|423355239|ref|ZP_17332864.1| aspartate racemase [Bacillus cereus IS075]
gi|423373290|ref|ZP_17350629.1| aspartate racemase [Bacillus cereus AND1407]
gi|423570979|ref|ZP_17547224.1| aspartate racemase [Bacillus cereus MSX-A12]
gi|217067288|gb|ACJ81538.1| probable amino-acid racemase [Bacillus cereus AH187]
gi|228641975|gb|EEK98270.1| amino-acid racemase [Bacillus cereus BDRD-ST26]
gi|358355283|dbj|BAL20455.1| aspartate racemase family protein [Bacillus cereus NC7401]
gi|401084356|gb|EJP92603.1| aspartate racemase [Bacillus cereus IS075]
gi|401096785|gb|EJQ04823.1| aspartate racemase [Bacillus cereus AND1407]
gi|401202961|gb|EJR09809.1| aspartate racemase [Bacillus cereus MSX-A12]
Length = 224
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 95/223 (42%), Gaps = 40/223 (17%)
Query: 83 VGIVGGASVDSTL----NLLGKLVQLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST ++ K + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAKCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I MPC+ +H++ +E+ + S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGASFIAMPCNTAHLYFEELQQSLSIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + K + E + R+ +LA A + AG YQ+ + E + +K +
Sbjct: 103 IVDETLKAIPE---------TAKRVALLATEATVQAGIYQDGIAKRNIEYIHHEK--WQD 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
+ + + VE AR L AL + L V+T I+A D+
Sbjct: 152 MINQIITYIKSGKVEEARELWN-ALVLQLREEVDTAIIACTDL 193
>gi|229087301|ref|ZP_04219443.1| amino-acid racemase [Bacillus cereus Rock3-44]
gi|228696003|gb|EEL48846.1| amino-acid racemase [Bacillus cereus Rock3-44]
Length = 227
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE G I MPC+ +H++ D++ SVP L++ + KE+ ++K R+ +
Sbjct: 70 LESTGVDFIAMPCNTAHLYFDQLQNSVSVPVLNMVDETLKEIPN-HIK--------RVAL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQV 280
LA +A + +G YQ+ + + + K + + T+ + + ++ A N L L
Sbjct: 121 LATDATIQSGIYQDGIAKRDMDYI--HKNSWQTTITQIISNIKTGNINKA-NELWYTLCT 177
Query: 281 LLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIKWVKSAEKG 331
L AV+ VI+A D+ ++L P +D LA++ + S +KG
Sbjct: 178 ELSEAVDAVIVACTDL-NVLSNTAPYNYYLVDSSTCLAQAVVSTYLSFQKG 227
>gi|350272252|ref|YP_004883560.1| aspartate racemase [Oscillibacter valericigenes Sjm18-20]
gi|348597094|dbj|BAL01055.1| aspartate racemase [Oscillibacter valericigenes Sjm18-20]
Length = 231
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGE--ENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG S +ST++ Q+ E + + L + LL S D S
Sbjct: 2 KTIGLIGGMSWESTVSYY----QIVNEVIKKELGGLHSAKVLL----YSVDFSEIEEYQS 53
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
KG + D L + LEKAGA IV+ + H ++ K S+P LH++E
Sbjct: 54 KGDWEKSGDVL-----SEAAMNLEKAGADFIVVCTNTMHKVAPQIQKKISIPILHIAEAT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
A L +N++ ++ +L +T FY+EKL G EV+ P + +E
Sbjct: 109 ADALHRSNIQ--------KVALLGTKYTMTQDFYKEKLIDAGIEVLTPGEDEIE 154
>gi|449896828|ref|ZP_21789945.1| putative amino acid recemase [Streptococcus mutans R221]
gi|449261524|gb|EMC58996.1| putative amino acid recemase [Streptococcus mutans R221]
Length = 230
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 19/169 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +ST + + + +E L S +L L S D + G
Sbjct: 2 KTIGLIGGMSWESTTSYYQFINETIKKELGG---LHSAKIL---LYSVDFAEIEHYQASG 55
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
D + E L + LE+AGA IV+ + H ++ K ++P LH+++ A+
Sbjct: 56 -----DWAKSAEVLSQIAQKLEQAGADFIVICTNTMHKVAPQIQKQIAIPILHIAQATAE 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
L E ++ ++G+L +T FY+EKL G EV++PD+A
Sbjct: 111 ALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQA 151
>gi|398824705|ref|ZP_10583026.1| aspartate racemase [Bradyrhizobium sp. YR681]
gi|398224572|gb|EJN10873.1| aspartate racemase [Bradyrhizobium sp. YR681]
Length = 229
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 19/166 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +ST L KL+ + D L S PLL + S+D + + G
Sbjct: 2 QTIGLIGGMSWEST-ALYYKLI--NERVRDRMGKLHSAPLL---MYSYDFQAIKEMQYAG 55
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
+ SL + RR LE AGAR IV+ + H E+ ++PF+H+ + A+
Sbjct: 56 RWDEAAASL-ADVARR----LENAGARAIVLCTNTMHKLAPEIAANVTIPFIHIGDATAE 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
++ + R+G+L + FY ++L+ +V++P
Sbjct: 111 RIRSKGYR--------RVGLLGTKFTMEEDFYIDRLRAHDLDVLVP 148
>gi|390570421|ref|ZP_10250686.1| aspartate racemase [Burkholderia terrae BS001]
gi|389937601|gb|EIM99464.1| aspartate racemase [Burkholderia terrae BS001]
Length = 491
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 119/260 (45%), Gaps = 34/260 (13%)
Query: 83 VGIVGGASVDSTLNLLGKLVQ---LSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+G+VGG +T++ + K+V+ + +++ ++ +P + DR+ +
Sbjct: 221 LGVVGGVGPAATVDFMHKVVRNTPAARDQDHIKVIVEQNPQIP------DRTD----HLT 270
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G G D +L + +K LE GA I +PC+ +H + + VP +++ A
Sbjct: 271 GDGA--DPTLALYATCKK---LEDGGADLIAIPCNTAHAFIGPIEARLRVPIINMMNVTA 325
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
L+ A ++ RIG+LA + + +G Y+ L+ G VLP A +
Sbjct: 326 DYLRTA-FPAVD-----RIGLLATDGTIASGVYRTALEARGMTQVLPPLAMQARVMNAIY 379
Query: 260 DALNRK----DVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKK-----C 310
A K + E A +++ A++ LL++ V ++LA ++ L P + +K
Sbjct: 380 GARGVKAGFTNGECADDII-AAVESLLLQQVEVILLACTELPLLFPQAATVTRKGRSAHL 438
Query: 311 IDPMDALARSTIKWVKSAEK 330
+DP D LAR +++ + +
Sbjct: 439 VDPTDVLARCCVEFARGTPR 458
>gi|283955428|ref|ZP_06372926.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
414]
gi|283793055|gb|EFC31826.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
414]
Length = 227
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEE----NDFPFLLCSDPLLNKELLSHDRSSFSSLN 137
T+GI+GG S +ST+ + Q ++ N LL S E+L
Sbjct: 3 TIGIIGGMSFESTITYYKIINQAINDKLKSLNSAKILLYSVNFEEIEILQ---------- 52
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
K Q ++ E ++ LE AG I++ + H DE+ K ++P LH+++
Sbjct: 53 -KQDKWQEAAQILSECAKK----LELAGVDFIIITTNTMHKVFDEIQKSINIPVLHIAKS 107
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
AK LK+ N++ ++G+L +T FY++ L+ E ++P
Sbjct: 108 TAKALKQENIQ--------KVGLLGTKYTMTQDFYKKILEEENISTIIP 148
>gi|404369431|ref|ZP_10974770.1| aspartate racemase [Fusobacterium ulcerans ATCC 49185]
gi|313690630|gb|EFS27465.1| aspartate racemase [Fusobacterium ulcerans ATCC 49185]
Length = 230
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 29/172 (16%)
Query: 81 NTVGIVGGASVDSTLN---LLGKLVQ--LSGEENDFPFLLCSDPLLNKELLSHDRSSFSS 135
T+G++GG S +ST+ ++ ++++ L G L S L+ L S D
Sbjct: 2 KTIGLIGGMSWESTVTYYEIINRIIKEKLGG--------LHSGKLV---LFSVDFQEIEE 50
Query: 136 LNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195
KG + D S + L LEKAGA IV+ + H ++ K ++P LH++
Sbjct: 51 CQAKG---EWDKSAKI--LTEAAQSLEKAGADFIVICTNTMHKIAPDIQKNINIPILHIA 105
Query: 196 ECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD 247
E A EL + +K ++ +L + FY+ KL G EVV+PD
Sbjct: 106 EATADELDKKEIK--------KVALLGTKYTMEQDFYKNKLIDRGIEVVIPD 149
>gi|448450776|ref|ZP_21592509.1| aspartate racemase [Halorubrum litoreum JCM 13561]
gi|445811287|gb|EMA61295.1| aspartate racemase [Halorubrum litoreum JCM 13561]
Length = 231
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 111/255 (43%), Gaps = 40/255 (15%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLL---NKELLSHDRSSFSSL 136
+GI+GG ++T+N +L+ + E D L+ +DP + N +L S
Sbjct: 11 LGILGGMGPEATINFQRELLAETPAEIDQDHIVTLVSNDPKIPDRNAAILDGSESPLP-- 68
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
L++ L++AGA I MPC+ +H ++ ++ F+++ +
Sbjct: 69 ----------------RLQKNAKTLKEAGADVIAMPCNTAHYYYGDLKDSIEAEFINMIQ 112
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
+ L++ ++ R G+LA +L G Y + ++V P+ T L+
Sbjct: 113 TASNTLEQNGVE--------RAGLLATKTVLDVGIYDSYFANSPVDLVAPENKTR---LM 161
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDA 316
A+ A+ R D A L ++ L R +++ D+ +L + L + DP+
Sbjct: 162 EAIYAVKRGDHREATQTLIPVIEYLERRGCEALLIGCSDLS-VLSIESELTE--YDPITL 218
Query: 317 LARSTIKWVKSAEKG 331
LAR +++ V E+G
Sbjct: 219 LARESVERV--TERG 231
>gi|340759522|ref|ZP_08696091.1| aspartate racemase [Fusobacterium varium ATCC 27725]
gi|251835644|gb|EES64183.1| aspartate racemase [Fusobacterium varium ATCC 27725]
Length = 230
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 29/172 (16%)
Query: 81 NTVGIVGGASVDSTLN---LLGKLVQ--LSGEENDFPFLLCSDPLLNKELLSHDRSSFSS 135
T+G++GG S +ST+ ++ + ++ L G L S ++ L S D
Sbjct: 2 KTIGLIGGMSWESTVTYYEIINRTIKEKLGG--------LHSGKIV---LFSVDFQEIEE 50
Query: 136 LNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195
KG + D S E L LEKAGA IV+ + H ++ + S+P LH++
Sbjct: 51 CQAKG---EWDKS--AEILTEAAQNLEKAGADFIVICTNTMHKIAPDIQEKISIPILHIA 105
Query: 196 ECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD 247
E A EL + N+K ++ +L + FY+ KL G EV++PD
Sbjct: 106 EATADELDKKNIK--------KVALLGTKYTMEQDFYKNKLVDRGIEVIVPD 149
>gi|423691678|ref|ZP_17666198.1| aspartate racemase [Pseudomonas fluorescens SS101]
gi|388000855|gb|EIK62184.1| aspartate racemase [Pseudomonas fluorescens SS101]
Length = 241
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 102/233 (43%), Gaps = 27/233 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +S+ + Q ++ PL + ++L + +
Sbjct: 2 RTIGLIGGMSWESSAEYYRLINQRVRDQ--------LGPLRSAQVLMYSVDFGPVEQAQH 53
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
G D +LI+E+ R+ L+ GA C+V+ + H+ + S+PFLH+++ A
Sbjct: 54 AGRWDDAALILEDAARR---LQAGGADCVVLCTNTMHLVAPRIEAAVSIPFLHIADATAT 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD---KATMEHTLIP 257
LEAG+ L +G+L + F + +L +G V++PD + + +
Sbjct: 111 -------AALEAGT-LTVGLLGTAFTMEQDFLKSRLAAQGLTVLVPDADERKAVHRIIYE 162
Query: 258 ALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD---PLL 307
L D +R + + +Q L R +IL ++ L+ P+ PLL
Sbjct: 163 ELCVGVISD--ASRQVYQRVIQTLAARGAQAIILGCTEICLLIQPEHSALPLL 213
>gi|449918388|ref|ZP_21797307.1| putative amino acid recemase [Streptococcus mutans 1SM1]
gi|449160397|gb|EMB63666.1| putative amino acid recemase [Streptococcus mutans 1SM1]
Length = 230
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 19/169 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +ST + + + +E L S +L L S D + G
Sbjct: 2 KTIGLIGGMSWESTTSYYQFINETIKKELGG---LHSAKIL---LYSVDFAEIEHYQASG 55
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
D + E L + LE+AGA IV+ + H ++ K ++P LH+++ A+
Sbjct: 56 -----DWAKSAEVLSQIAQKLEQAGADFIVICTNTMHKVAPQIQKQIAIPILHIAQATAE 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
L E ++ ++G L +T FY+EKL G EV++PD+A
Sbjct: 111 ALLENGIQ--------KVGFLGTKYTMTQDFYKEKLLEAGLEVLIPDQA 151
>gi|383815508|ref|ZP_09970920.1| putative aspartate/glutamate racemase [Serratia sp. M24T3]
gi|383295746|gb|EIC84068.1| putative aspartate/glutamate racemase [Serratia sp. M24T3]
Length = 230
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 11/147 (7%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
L KAGA IV+ + H D + + +P LH+++ + +++ N+ RIG+
Sbjct: 71 LRKAGAEIIVVCTNTMHKVADAIERIGGLPLLHIADATGQAIQQQNIG--------RIGL 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATME--HTLIPALDALNRKDVEGARNLLRIAL 278
L + FY+ +L+ +G EV+ P++A E H +I L K ++G+R R +
Sbjct: 123 LGTRFTMEQTFYRGRLEAQGIEVLTPNEADREIIHRIIYEELCLG-KILDGSREEYRRII 181
Query: 279 QVLLVRAVNTVILASDDMQDLLPPDDP 305
Q L + +IL ++ L+ D
Sbjct: 182 QSLEQQGAQGIILGCTEITLLIGQQDA 208
>gi|392392204|ref|YP_006428806.1| aspartate racemase [Desulfitobacterium dehalogenans ATCC 51507]
gi|390523282|gb|AFL99012.1| aspartate racemase [Desulfitobacterium dehalogenans ATCC 51507]
Length = 236
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 81/169 (47%), Gaps = 24/169 (14%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSG---EENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+GI+GG +T+++ K+V L+ +++ ++ + P + +R F
Sbjct: 5 IGILGGMGPLATVDMFNKIVTLTEATRDQDHIHLIIDNYPGI------PNRLDF----LL 54
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G G + +++ L+ L+ GA I+MPC+ +H ++D + K + F+++ E A
Sbjct: 55 GDGESPEKAMVESALK-----LQSMGADAIIMPCNTAHYFYDAIKKHLRIDFINMIEETA 109
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDK 248
KE+K+ E+ +IG+LA G Y + EV+ PD+
Sbjct: 110 KEIKK------ESTRCKKIGLLATRGTYNTGVYDKTFASYDMEVIKPDE 152
>gi|153951898|ref|YP_001397342.1| putative aspartate racemase [Campylobacter jejuni subsp. doylei
269.97]
gi|152939344|gb|ABS44085.1| putative aspartate racemase [Campylobacter jejuni subsp. doylei
269.97]
Length = 231
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 29/170 (17%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEE----NDFPFLLCSDPLLNKE-LLSHDRSSFSSL 136
T+GI+GG S +ST+ + Q ++ N LL S E L S D+
Sbjct: 3 TIGIIGGMSFESTITYYKTINQAINDKLKSLNSANILLYSVNFEEIENLQSQDKWQ---- 58
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+ + I+ +K LE AGA I++ + H DE+ + ++P LH+++
Sbjct: 59 ---------EAAQILSQCAKK---LELAGASFIIIATNTMHKVFDEIQQNINIPILHIAK 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
AK LK+ N++ +IG+L + FY++ L E V++P
Sbjct: 107 SSAKALKQENIQ--------KIGLLGTKYTMAQDFYKKMLIEENISVIIP 148
>gi|452854530|ref|YP_007496213.1| putative amino-acid racemase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|452078790|emb|CCP20541.1| putative amino-acid racemase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 226
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 101/225 (44%), Gaps = 44/225 (19%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSG--EENDFPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + K+V ++ G + DFP ++ C P + L+H
Sbjct: 2 IGILAGMGPKSTGPFVDKVVDECQKIYGAIHDMDFPHMMIYSCPTPFYMNKPLNH----- 56
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
++ ++I L+ LEK G I +PC+ +HI+ +++ K SVP L+
Sbjct: 57 ---------TDMEKAIIEGALK-----LEKTGVDFIAIPCNTAHIYFNQIKKSLSVPLLN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD--KATM 251
+ + K++ + + K +LA + +G +QE L EG++ + D + +
Sbjct: 103 MVDETIKKIPKGSKKA---------ALLATVPTVQSGIFQEALNREGYDFLHQDSWQIYV 153
Query: 252 EHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
+H ++ + + + A L L L V+TVI+A D+
Sbjct: 154 DHI----IEKIKQGQINAASTLYD-ELHRELAEKVDTVIIACTDL 193
>gi|375135318|ref|YP_004995968.1| aspartate racemase [Acinetobacter calcoaceticus PHEA-2]
gi|325122763|gb|ADY82286.1| aspartate racemase [Acinetobacter calcoaceticus PHEA-2]
Length = 250
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 27/180 (15%)
Query: 82 TVGIVGGASVDST---LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG S +ST + K+V L + ++N S D ++L
Sbjct: 3 TIGLLGGMSWESTALYYQQINKMVH-----RKLGKLHSAKVIIN----SVDFEEIAALQA 53
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
KG Q + + E + LEKAGA CI++ + H ++ +VPFLH+++
Sbjct: 54 KGLW-QEAGAYLAEQAQN----LEKAGANCILVCTNTMHKVAAQIEDSITVPFLHIADAT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA--TMEHTLI 256
AKE+ N+ ++ +L + FY+ +LQ G +VV+P++A + H++I
Sbjct: 109 AKEILSQNIG--------KVALLGTAFTMEQDFYKARLQDYGIDVVIPNEADRKIVHSII 160
>gi|398832558|ref|ZP_10590716.1| aspartate racemase [Herbaspirillum sp. YR522]
gi|398223074|gb|EJN09428.1| aspartate racemase [Herbaspirillum sp. YR522]
Length = 486
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 117/266 (43%), Gaps = 34/266 (12%)
Query: 74 DALLNQANTVGIVGGASVDSTLNLLGKLVQ---LSGEENDFPFLLCSDPLLNKELLSHDR 130
D L + +G+VGG +T++ + K+V+ + +++ + +P + DR
Sbjct: 240 DHLATRPFKLGVVGGVGPAATVDFMQKIVRNTPAARDQDHIKLHVEQNPQIP------DR 293
Query: 131 SSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVP 190
+ N G G LD ++ + +K LE GA I +PC+ +H + + + ++P
Sbjct: 294 TE----NLVGDG--LDPTIALYATCKK---LEDGGADLIAIPCNTAHAYVERIQGSLAIP 344
Query: 191 FLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKAT 250
+++ A+ ++ R+G+LA + + +G YQ +L G ++P A
Sbjct: 345 IVNMLTVTAEAIRT------RFAQLTRVGLLATSGTIGSGVYQRELAAHGLAQLVPSPAM 398
Query: 251 MEHTL--IPALDALNRKDVEGA-RNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLL 307
+ + I + +G ++ +R AL L+ + +IL ++ LL P P
Sbjct: 399 QQRVMNAIYGPQGVKAGFTQGQCQDDIRAALDDLVQQGAEVIILGCTEL-PLLLPSGPWA 457
Query: 308 KK------CIDPMDALARSTIKWVKS 327
+ +DP + LAR + + +
Sbjct: 458 HQGGSTLTLVDPTETLARRCVAYASA 483
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 90/214 (42%), Gaps = 24/214 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
+ G++GG ++ ++ KL++ N +D + + + SS S+
Sbjct: 11 RSYGVIGGLGPLASADVFFKLMRSIAGRN---MADSADVVFEQHPFKGNHSSTSATT--- 64
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
+ L V +L R E+ IV+PC LSH + DE+ ++P + + +A
Sbjct: 65 -----ERKLYVFDLIRA---FEQRHIDVIVLPCFLSHTFLDELSANTTLPIVDLMAALAL 116
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL- 259
++ + RIGVLA + A ++ GFEVV P + + A+
Sbjct: 117 HVRS------QYPHARRIGVLASDFTREARLFERYFAAPGFEVVYPRPHEGRNLVSEAVY 170
Query: 260 --DALNRKDVEGAR-NLLRIALQVLLVRAVNTVI 290
+ R ++GA LLR A L + V+ ++
Sbjct: 171 GEQGIKRGQLDGAPLALLRQAAHDLAAQQVDLIL 204
>gi|375148634|ref|YP_005011075.1| aspartate racemase [Niastella koreensis GR20-10]
gi|361062680|gb|AEW01672.1| aspartate racemase [Niastella koreensis GR20-10]
Length = 229
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
L++AGA CI++ + H+ D++ + +PF+H++E AK +KE +K ++ +
Sbjct: 71 LKQAGADCIILAANTPHLIADKIKQAVQLPFIHIAEATAKAIKETGIK--------KVAL 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
L + FY + L +G ++P++A
Sbjct: 123 LGTRFTMENSFYTDALAAKGISTLVPNEA 151
>gi|152975643|ref|YP_001375160.1| aspartate racemase [Bacillus cytotoxicus NVH 391-98]
gi|152024395|gb|ABS22165.1| aspartate racemase [Bacillus cytotoxicus NVH 391-98]
Length = 226
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+E +GA CI+M + H + DEV K S+P LH+ + A+++ + +K RIG+
Sbjct: 69 VESSGADCILMCSNTVHQFADEVEKAVSIPLLHIGDVSAEKIVKQQIK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDK 248
L + FY+ +L + G E ++P K
Sbjct: 121 LGTKQTMEKDFYKARLANYGIETMIPHK 148
>gi|52140751|ref|YP_086078.1| aspartate racemase [Bacillus cereus E33L]
gi|51974220|gb|AAU15770.1| aspartate racemase [Bacillus cereus E33L]
Length = 224
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 107/250 (42%), Gaps = 46/250 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I MPC+ +H++ +E+ + S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGASFIAMPCNTAHLYFEELQRSLSIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + K + E K + +LA A + +G YQ+ + E + ++ +
Sbjct: 103 IVDETLKAIPETAKK---------VALLATEATVQSGIYQDGIAKRNIEYIHYEQ--WQE 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDP 313
++ + + +VE AR L AL + L V+TVI+A D+ + D +D
Sbjct: 152 SINQIITYIKSGEVEEARELWS-ALVLQLKDEVDTVIIACTDLNVVANED------FVDS 204
Query: 314 MDALARSTIK 323
LA++ ++
Sbjct: 205 SQCLAKAVVR 214
>gi|418473141|ref|ZP_13042750.1| hypothetical protein SMCF_5752 [Streptomyces coelicoflavus ZG0656]
gi|371546257|gb|EHN74808.1| hypothetical protein SMCF_5752 [Streptomyces coelicoflavus ZG0656]
Length = 269
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 111/258 (43%), Gaps = 34/258 (13%)
Query: 83 VGIVGGASVDSTLNLLGKLVQ---LSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
VGI+GG +T KL++ ++ +++ + +DP + DR +
Sbjct: 8 VGILGGMGPAATAEFYAKLIRRTPVTRDQDHLRVAIWADPTVP------DR-----VGAV 56
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH-VSECV 198
GG ++E RR L GA VMPCH +H++ + + FL V E V
Sbjct: 57 LGGTTDPYPAMLEGARR----LRDLGATVAVMPCHTAHVFLPALVGDSGLRFLDMVGETV 112
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPA 258
A EL+ + G L A L +G YQ +L+ E F+VVLP + T + A
Sbjct: 113 A-ELERRDGAAGGIGL------LGTRATLASGLYQNRLRAERFDVVLPQETTQWQVDL-A 164
Query: 259 LDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM----QDLLPPDDPLLKKCIDPM 314
+ + + + A L A++ + + ++LA ++ + L P P L +DP
Sbjct: 165 IKKVKQGNPRAAGQHLDNAVRAMARTDASPIVLACTELPLAARHLTPAGGPEL---LDPT 221
Query: 315 DALARSTIKWVKSAEKGT 332
D LA + I+ + T
Sbjct: 222 DLLADAVIRECRGTPPAT 239
>gi|262279604|ref|ZP_06057389.1| aspartate racemase [Acinetobacter calcoaceticus RUH2202]
gi|262259955|gb|EEY78688.1| aspartate racemase [Acinetobacter calcoaceticus RUH2202]
Length = 247
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 81/171 (47%), Gaps = 25/171 (14%)
Query: 82 TVGIVGGASVDST---LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG S +ST + K+V L + ++N S D ++L
Sbjct: 3 TIGLLGGMSWESTALYYQQINKMVH-----GKLGKLHSAKVIIN----SVDFEEIATLQA 53
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
KG + L + L LEKAGA CI++ + H ++ +VPF+H+++
Sbjct: 54 KGLWQEAGAYLAEQALN-----LEKAGAECILVCTNTMHKIAPQIEDAITVPFIHIADAT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
AKE+ +++ ++ +L + FY+ +LQ G +V++P++A
Sbjct: 109 AKEIVSQDIR--------KVALLGTAFTMEQDFYKARLQDHGIDVIIPNEA 151
>gi|229198914|ref|ZP_04325604.1| amino-acid racemase [Bacillus cereus m1293]
gi|423573550|ref|ZP_17549669.1| aspartate racemase [Bacillus cereus MSX-D12]
gi|228584551|gb|EEK42679.1| amino-acid racemase [Bacillus cereus m1293]
gi|401214668|gb|EJR21393.1| aspartate racemase [Bacillus cereus MSX-D12]
Length = 224
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 95/223 (42%), Gaps = 40/223 (17%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I MPC+ +H++ +E+ + S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGASFIAMPCNTAHLYFEELQQSLSIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + K + E + R+ +LA A + AG YQ+ + E + +K +
Sbjct: 103 IVDETLKAIPE---------TAKRVALLATEATVQAGIYQDGIAKRNIEYIHHEK--WQD 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
+ + + VE AR L AL + L V+T I+A D+
Sbjct: 152 MINQIITYIKSGKVEEARELWN-ALVLQLREEVDTAIIACTDL 193
>gi|394993679|ref|ZP_10386421.1| aspartate racemase [Bacillus sp. 916]
gi|393805473|gb|EJD66850.1| aspartate racemase [Bacillus sp. 916]
Length = 226
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 102/226 (45%), Gaps = 46/226 (20%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSG--EENDFPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + K+V ++ G + DFP ++ C P + L+H
Sbjct: 2 IGILAGMGPKSTGPFVDKVVDECQKIYGAIHDMDFPHMMIYSCPTPFYMNKPLNH----- 56
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
++ ++I V LEK G I +PC+ +HI+ +++ K SVP L+
Sbjct: 57 ---------TDMEKAII-----EGAVKLEKTGVDFIAIPCNTAHIYFNQIKKSISVPLLN 102
Query: 194 -VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD--KAT 250
V E + K + GS + +LA + +G +QE L EG++ + D +
Sbjct: 103 MVDETINK---------IPKGSK-KAALLATVPTVQSGIFQEALNREGYDFLHQDSWQIY 152
Query: 251 MEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
++H ++ + + ++ AR L L L V+TVI+A D+
Sbjct: 153 VDHI----IEKIKQGQIDEARTLYD-ELHRDLAEKVDTVIIACTDL 193
>gi|70730197|ref|YP_259936.1| aspartate racemase [Pseudomonas protegens Pf-5]
gi|68344496|gb|AAY92102.1| aspartate racemase [Pseudomonas protegens Pf-5]
Length = 230
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 108/247 (43%), Gaps = 25/247 (10%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +S+ +L+ + PL + LL + F +
Sbjct: 2 RTIGLIGGMSWESSAEYY-RLINQQVRDR-------LGPLRSARLLMYS-VDFGPVEQAQ 52
Query: 141 GGVQLDDS--LIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
+ DD+ ++VE RR LE GA C+V+ + H ++ VPF+H+++ V
Sbjct: 53 HAGRWDDAAAILVEAARR----LEAGGAECVVLCTNTMHKVAGQIEAAIGVPFVHIADPV 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPA 258
++ +A L +G+L + F + +L+ +G +V++PD A +
Sbjct: 109 --------VQAAQAAGTLSVGLLGTAFTMEQAFLKGRLEDQGLKVLVPDAAQRQAVHRII 160
Query: 259 LDALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDAL 317
+ L V E +R L + + L R +IL ++ LL P+ L +D +
Sbjct: 161 YEELCVGVVSESSRRLYQHVIDGLQARGAEAIILGCTEIGLLLKPEHSAL-PLLDTTELH 219
Query: 318 ARSTIKW 324
AR+ + +
Sbjct: 220 ARAAVDF 226
>gi|390572113|ref|ZP_10252338.1| aspartate racemase [Burkholderia terrae BS001]
gi|389935901|gb|EIM97804.1| aspartate racemase [Burkholderia terrae BS001]
Length = 493
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 14/178 (7%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE+ A I +PC+ +H + + + +P +++ + L+E+ E IGV
Sbjct: 314 LEEGDADIIAIPCNTAHAFVERIQPYLGIPIVNMLTETVRYLRESYPAQRE------IGV 367
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTL--IPALDALNRKDVEGA-RNLLRIA 277
LA + + +G Y++ L+ +G V P A + I D + G + + A
Sbjct: 368 LATSGTIASGVYEKALESQGLRQVAPGPALQARVMEAIYGKDGVKAGFTTGQCQEDIAAA 427
Query: 278 LQVLLVRAVNTVILASDDMQDLLPPDDPLLK-----KCIDPMDALARSTIKWVKSAEK 330
++ L+ V ++L ++ LLP + + + IDP D LAR I + +A +
Sbjct: 428 VEGLIAEGVEIIVLGCTELPLLLPQSEFAGRNGARVRLIDPTDVLARQCIAYATAASE 485
>gi|378823358|ref|ZP_09846007.1| aspartate racemase [Sutterella parvirubra YIT 11816]
gi|378597819|gb|EHY31058.1| aspartate racemase [Sutterella parvirubra YIT 11816]
Length = 221
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 19/172 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S++ST+ +L+ + E L + E +R C+
Sbjct: 2 KTIGLIGGMSLESTVTYY-QLINRAVRERLGGLHSAKIVLWSVEFDEIER-------CQS 53
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
G + I+ + + LE AGA +++ + H DE SVP LH++E +
Sbjct: 54 SGDWEKAARILADCAKG---LEAAGADMVLICTNTMHKVADETAAVVSVPLLHIAEATGR 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
L +K R+ +L LT FY+++L +GFEV++P A +E
Sbjct: 111 ALGRDGVK--------RVALLGTKYTLTEPFYKDRLATQGFEVMIPSAADVE 154
>gi|225023584|ref|ZP_03712776.1| hypothetical protein EIKCOROL_00443 [Eikenella corrodens ATCC
23834]
gi|224943679|gb|EEG24888.1| hypothetical protein EIKCOROL_00443 [Eikenella corrodens ATCC
23834]
Length = 235
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 100/231 (43%), Gaps = 32/231 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQL----SGEENDFPFLLCSDPLLNKELLSHDRSSFSSL 136
NT+GI+GG S +ST ++ +L G + P LL S +E++
Sbjct: 2 NTLGIIGGMSPESTAAYYTQINRLINRQKGGNHSAPILLASVEF--QEIV---------- 49
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+C+ G D E L + LE+AGA +++ + H + VPFLH+ +
Sbjct: 50 DCQQRG---DWHKAGEILAQAARTLEQAGADAVLLATNTMHKVAAPIQAVIGVPFLHILD 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD---KATMEH 253
VA+ ++ ++ +G+L + FY+E L G + ++PD +A +
Sbjct: 107 SVAERIRAQGIRT--------VGLLGTRFTMQDAFYREGLAARGIQAIVPDECVQAEIHR 158
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
+ L N E +R A++ L + +IL ++ L+ P+D
Sbjct: 159 IIFEELCVGNF--TENSRRFYVQAIERLAAQGAQGIILGCTEIGLLVRPED 207
>gi|449971415|ref|ZP_21814364.1| putative amino acid recemase, partial [Streptococcus mutans 2VS1]
gi|450060086|ref|ZP_21843599.1| putative amino acid recemase, partial [Streptococcus mutans NLML4]
gi|449172199|gb|EMB74834.1| putative amino acid recemase, partial [Streptococcus mutans 2VS1]
gi|449202405|gb|EMC03325.1| putative amino acid recemase, partial [Streptococcus mutans NLML4]
Length = 227
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 8/89 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE+AGA IV+ + H ++ K ++P LH+++ A+ L E ++ ++G+
Sbjct: 68 LEQAGADFIVICTNTMHKVAPQIQKQIAIPILHIAQATAEALLENGIQ--------KVGL 119
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
L +T FY+EKL G EV++PD+A
Sbjct: 120 LGTKYTMTQDFYKEKLLEAGLEVLIPDQA 148
>gi|420251564|ref|ZP_14754728.1| aspartate racemase [Burkholderia sp. BT03]
gi|398057445|gb|EJL49406.1| aspartate racemase [Burkholderia sp. BT03]
Length = 493
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 14/178 (7%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE+ A I +PC+ +H + + + +P +++ + L+E+ E IGV
Sbjct: 314 LEEGDADIIAIPCNTAHAFVERIQPYLGIPIVNMLTETVRYLRESYPAQRE------IGV 367
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTL--IPALDALNRKDVEGA-RNLLRIA 277
LA + + +G Y++ L+ +G V P A + I D + G + + A
Sbjct: 368 LATSGTIASGVYEKALESQGLRQVAPGPALQARVMEAIYGKDGVKAGFTTGQCQEDIAAA 427
Query: 278 LQVLLVRAVNTVILASDDMQDLLPPDDPLLK-----KCIDPMDALARSTIKWVKSAEK 330
++ L+ V ++L ++ LLP + + + IDP D LAR I + +A +
Sbjct: 428 VEGLIAEGVEIIVLGCTELPLLLPHSEFTGRNGARVRLIDPTDVLARQCIAYATAASE 485
>gi|421078065|ref|ZP_15539024.1| aspartate racemase [Pelosinus fermentans JBW45]
gi|392523650|gb|EIW46817.1| aspartate racemase [Pelosinus fermentans JBW45]
Length = 236
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 107/249 (42%), Gaps = 29/249 (11%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFL-LCSDPLLNKELLSHDRSSFSSLNCKG 140
++GI+GG +T +L K++ ++ + D + +C D N + ++ G
Sbjct: 4 SIGIIGGMGSLATCDLFKKIIDMTDAKCDQEHIHICID--CNTNIPDRTKAIL------G 55
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
GG + + R V L+ GA ++MPC+ +H ++D++ +P L++ + +
Sbjct: 56 GGKDP-----IPEMVRSGVRLQSMGANVLIMPCNTAHYFYDKITPFFDIPLLNMLKETVQ 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALD 260
E++ +K +IG+LA + + + Y L G ++V+P + +
Sbjct: 111 EIQRRKIK--------KIGLLATDGTIKSRVYHTALADPGIDLVIPSPKRQMSVMDVIYN 162
Query: 261 ALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQ---DLLPPDDPLLKKCIDPMDAL 317
+ + N + L + ++L ++ +L + P IDP L
Sbjct: 163 GIKASNRNINLNQFYGTIDELFEKGAEILVLGCTELPVAFELFHIERP----SIDPTSVL 218
Query: 318 ARSTIKWVK 326
A + I++V+
Sbjct: 219 AAAAIRFVE 227
>gi|218236145|ref|YP_002369551.1| aspartate racemase [Bacillus cereus B4264]
gi|218164102|gb|ACK64094.1| aspartate racemase family protein [Bacillus cereus B4264]
Length = 224
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 98/224 (43%), Gaps = 42/224 (18%)
Query: 83 VGIVGGASVDSTLNLLG------KLVQLSGEENDFPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +++ + + DFP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVARCQIIYGAKYDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I MPC+ +H++ +E+ S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGASFIAMPCNTAHLYFEELQHSLSIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDK-ATME 252
+ + + + + N K R+ +LA A + AG YQ+ + E + +K TM
Sbjct: 103 IVDETLQAIPK-NAK--------RVALLATEATVQAGIYQDGIAKRNIEYIHYEKWQTMI 153
Query: 253 HTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
+ +I + + +VE AR L AL V L V+T I+A D+
Sbjct: 154 NQIITYIKS---GEVEKARKLWS-ALVVQLKDEVDTAIIACTDL 193
>gi|196044013|ref|ZP_03111250.1| probable amino-acid racemase [Bacillus cereus 03BB108]
gi|229187012|ref|ZP_04314163.1| amino-acid racemase [Bacillus cereus BGSC 6E1]
gi|196025349|gb|EDX64019.1| probable amino-acid racemase [Bacillus cereus 03BB108]
gi|228596464|gb|EEK54133.1| amino-acid racemase [Bacillus cereus BGSC 6E1]
Length = 224
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 107/250 (42%), Gaps = 46/250 (18%)
Query: 83 VGIVGGASVDSTL----NLLGKLVQLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST ++ K + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAKCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I MPC+ +H++ E+ + S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGASFIAMPCNTAHLYFKELQQSISIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + + + E N K R+ +LA A + AG YQ+ + E + +K +
Sbjct: 103 IVDETLQVIPE-NTK--------RVALLATEATVQAGIYQDGIAKRNIEYIHHEK--WQE 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDP 313
++ + + ++E AR L AL + L V+T I+A D+ + D +D
Sbjct: 152 SINQIISCIKGGEIEKARELWN-ALVLQLKDEVDTAIIACTDLNVVASED------FVDS 204
Query: 314 MDALARSTIK 323
LA++ ++
Sbjct: 205 SQCLAKAVVR 214
>gi|423557672|ref|ZP_17533974.1| aspartate racemase [Bacillus cereus MC67]
gi|401192682|gb|EJQ99694.1| aspartate racemase [Bacillus cereus MC67]
Length = 224
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 18/186 (9%)
Query: 145 LDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKE 204
+DD+ + + + LE G I MPC+ +H++ +E+ S+P L++ V + LKE
Sbjct: 54 IDDAAMKKAIIEGAQKLESTGVDFIAMPCNTAHLYFEELQHSISIPILNI---VVETLKE 110
Query: 205 ANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNR 264
G+ R+ +LA A + AG YQ+ + E + +K + + + +
Sbjct: 111 I------PGTAKRVALLATEATVQAGIYQDGIAQRNIEYIHNEK--WQEMINQIITCIKG 162
Query: 265 KDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIKW 324
+VE A L AL + L V+T I+A D+ + D +D +LA + ++
Sbjct: 163 GEVEEAHKLWS-ALVLQLKDEVDTAIIACTDLNVVANED------FVDSSQSLAEAVVRM 215
Query: 325 VKSAEK 330
S K
Sbjct: 216 YLSNTK 221
>gi|121612261|ref|YP_999809.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
81-176]
gi|167004784|ref|ZP_02270542.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
81-176]
gi|419617564|ref|ZP_14151136.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 129-258]
gi|87249036|gb|EAQ71998.1| aspartate racemase, putative [Campylobacter jejuni subsp. jejuni
81-176]
gi|380597090|gb|EIB17758.1| aspartate racemase [Campylobacter jejuni subsp. jejuni 129-258]
Length = 231
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 29/170 (17%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEE----NDFPFLLCSDPLLNKE-LLSHDRSSFSSL 136
T+GI+GG S +ST+ + Q ++ N LL S E L S D+
Sbjct: 3 TIGIIGGMSFESTITYYKTINQAINDKLKSLNSAKILLYSVNFEEIENLQSQDKWQ---- 58
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+ + I+ +K LE AGA I++ + H +E+ + ++P LH+++
Sbjct: 59 ---------EAAQILTQCAKK---LELAGANFIIIATNTMHKVFNEIQQNINIPILHIAK 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
AK LK+ N++ +IG+L +T FY++ L E V+ P
Sbjct: 107 SSAKALKQENIQ--------KIGLLGTKYTMTQDFYKKMLIEENISVITP 148
>gi|403236695|ref|ZP_10915281.1| aspartate racemase [Bacillus sp. 10403023]
Length = 235
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 9/164 (5%)
Query: 160 FLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIG 219
LE AG I +PC+ SH +++E+ K +P +++ E KE+ + G +IG
Sbjct: 72 LLEAAGVSNIAIPCNTSHYFYEELQKLTKIPIINMVEETIKEIHDM------YGDDTKIG 125
Query: 220 VLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTL-IPALDALNRKDVEGARNLLRIAL 278
+LA N + +G Y + + E+++P+ + E + I + + DV+ + L ++
Sbjct: 126 ILATNGTIRSGIYADVCKKYKLELLVPNDSLQEKVMDIIYNNVKSDLDVDSSE-LEQLIK 184
Query: 279 QVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTI 322
++ TVILA ++ + D + ID M+ L +I
Sbjct: 185 HLVEKENCKTVILACTELS-CIKLSDEAERHTIDAMNVLVERSI 227
>gi|409438827|ref|ZP_11265890.1| putative racemase [Rhizobium mesoamericanum STM3625]
gi|408749487|emb|CCM77066.1| putative racemase [Rhizobium mesoamericanum STM3625]
Length = 239
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 88/173 (50%), Gaps = 14/173 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
L+ AGARC+++ + H+ D+V SVP +H+ + AK LK + K PL +
Sbjct: 71 LQIAGARCVLICTNTMHLIADQVAARISVPLVHIIDETAKSLKASGRK-----RPL---L 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLIPALDALNRKDVEGARNLLRIAL 278
LA + GFY +++ G ++++P D T+ H +I + K + +R+ L +
Sbjct: 123 LATRYTMEHGFYASRMKSFGIDIIVPEADDRTVVHDIIFN-ELCAGKVLNSSRDKLMQII 181
Query: 279 QVLLVRAVNTVILASDDMQDLLPPDD-PLLKKCIDPMDALARSTIKWVKSAEK 330
+ V+ +++IL ++ +L P + PL D + AR+ +++ S E+
Sbjct: 182 ERERVKGADSIILGCTEICLILDPKNLPL--PGFDTTEIHARAAVEFALSDEE 232
>gi|399044511|ref|ZP_10738114.1| aspartate racemase [Rhizobium sp. CF122]
gi|398056931|gb|EJL48911.1| aspartate racemase [Rhizobium sp. CF122]
Length = 239
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 31/183 (16%)
Query: 81 NTVGIVGGASVDST---LNLLGKLVQ--LSGEENDFPFLLCSDPLLNKELLSHDRSSFSS 135
T+G++GG S +S+ L+ ++V+ L G L + +LL H +
Sbjct: 2 QTIGLIGGMSFESSAVYYRLINEMVRERLGG-------------LASADLLMHSVNFDEI 48
Query: 136 LNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195
+ + G D L + L+ AGARC+++ + H+ D+V SVP +H+
Sbjct: 49 VAMQRAG---DWDAAANRLGDVALHLQIAGARCMLICTNTMHLIADQVASRISVPLIHII 105
Query: 196 ECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA--TMEH 253
+ AK LK A K PL +LA + GFY ++++ G +VV+P+ A T H
Sbjct: 106 DETAKSLKAAGRK-----RPL---LLATRYTMEHGFYADRMKSLGVDVVVPEAADRTSVH 157
Query: 254 TLI 256
+I
Sbjct: 158 DII 160
>gi|229181072|ref|ZP_04308405.1| amino-acid racemase [Bacillus cereus 172560W]
gi|228602400|gb|EEK59888.1| amino-acid racemase [Bacillus cereus 172560W]
Length = 224
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 104/238 (43%), Gaps = 40/238 (16%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAGCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I MPC+ +H++ +E+ + S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGASFIAMPCNTAHLYFEELQRSLSIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + + + E N+K R+ +LA A + + YQ+ + E + +K +
Sbjct: 103 IVDETLQAIPE-NIK--------RVALLATEATVQSRIYQDGITKRNIEYIHHEK--WQE 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCI 311
++ + + ++E AR L AL + L V+TVI+A D+ + D +C+
Sbjct: 152 SINQIITCIKSGEIEEARELWN-ALVLQLREEVDTVIIACTDLNVVASEDFVASSQCL 208
>gi|374674299|dbj|BAL52190.1| aspartate racemase [Lactococcus lactis subsp. lactis IO-1]
Length = 240
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 167 RCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAI 226
+ V+PC+ +H + DE+ K +P LH+ + K R+ VLA
Sbjct: 78 KFFVVPCNTAHYYFDEMQKATEIPILHMPRIAVDSISHHFPKAK------RVAVLATEGT 131
Query: 227 LTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNL 273
+ G Y+E L+ +G+E V+PD E ++ L ++V+ RNL
Sbjct: 132 ILTGVYREALEEQGYEAVIPDDQLQE-----KVNRLIYQEVKENRNL 173
>gi|423603563|ref|ZP_17579456.1| aspartate racemase [Bacillus cereus VD102]
gi|401247542|gb|EJR53878.1| aspartate racemase [Bacillus cereus VD102]
Length = 224
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 107/250 (42%), Gaps = 46/250 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I MPC+ +H++ +E+ + S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGASFIAMPCNTAHLYFEELQQSLSIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + K + E + R+ +LA A + AG YQ+ + E + ++ +
Sbjct: 103 IVDETLKAIPE---------TAKRVALLATEATVQAGIYQDGIAKCNIEYIHYER--WQE 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDP 313
++ + + +VE AR L AL + L V+T I+A D+ + D +D
Sbjct: 152 SINQIITYIKSGEVEEARELWN-ALVLQLKDEVDTAIIACTDLNVVASED------FVDS 204
Query: 314 MDALARSTIK 323
LA++ ++
Sbjct: 205 SQCLAKAVVR 214
>gi|400289631|ref|ZP_10791659.1| putative amino acid recemase [Streptococcus ratti FA-1 = DSM 20564]
gi|399922016|gb|EJN94832.1| putative amino acid recemase [Streptococcus ratti FA-1 = DSM 20564]
Length = 230
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 23/169 (13%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGE--ENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
T+G++GG S +ST + QL E +N+ L + LL S D +
Sbjct: 3 TIGLIGGMSWESTTSYY----QLINETIKNELGGLHSAKILL----YSVDFAEIEHYQAS 54
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G D + E L + LE+AGA IV+ + H ++ + ++P LH+++ A
Sbjct: 55 G-----DWAKSAEVLSKIAQKLEQAGADFIVICTNTMHKVAPQIQEKITIPILHIAQATA 109
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDK 248
+ L E ++ ++G+L +T FY++KL G EV++PD+
Sbjct: 110 ESLLENGIQ--------KVGLLGTKYTMTQDFYKDKLLEAGLEVLVPDQ 150
>gi|84498424|ref|ZP_00997194.1| putative aspartate racemase [Janibacter sp. HTCC2649]
gi|84381167|gb|EAP97051.1| putative aspartate racemase [Janibacter sp. HTCC2649]
Length = 235
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 108/243 (44%), Gaps = 24/243 (9%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
VGI+GG +T+ + ++++++ D + D L+ DR+++ G
Sbjct: 6 VGILGGVGPMATVYFMQRVLEMTDAGRDQDHV---DMLVWNHASIPDRTAY----IVGDS 58
Query: 143 VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKEL 202
+ ++ ++ R LE+AGA+ I +PC+ + + DEV ++P + + V E
Sbjct: 59 DESPGPVMAQDARE----LERAGAKFIALPCNTAQAFQDEVAAAVTIPVIDIV-AVTVEA 113
Query: 203 KEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDAL 262
+A + L +G+LA + L A Y + G + PD + + D +
Sbjct: 114 AKAAVPGLTT-----LGILATDGTLRAETYHRAAEAAGLTPIAPDDVVQKDVMSMIYDGV 168
Query: 263 NRKDVEGARNLLRIALQVLLVRAVNTVILASDD---MQDLLPPDDPLLKKCIDPMDALAR 319
+ + +R+ A++ L + ++L + +Q L D+P +D +DALA
Sbjct: 169 -KAGMPVSRDRFDAAVEHLRTKGAGAIVLGCTELSILQTDLKVDEP---DVVDSLDALAA 224
Query: 320 STI 322
T+
Sbjct: 225 RTV 227
>gi|14591491|ref|NP_143571.1| aspartate racemase [Pyrococcus horikoshii OT3]
gi|209870333|pdb|2ZSK|A Chain A, Crystal Structure Of Ph1733, An Aspartate Racemase
Homologue, From Pyrococcus Horikoshii Ot3
gi|209870334|pdb|2ZSK|B Chain B, Crystal Structure Of Ph1733, An Aspartate Racemase
Homologue, From Pyrococcus Horikoshii Ot3
gi|3258164|dbj|BAA30847.1| 226aa long hypothetical aspartate racemase [Pyrococcus horikoshii
OT3]
Length = 226
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 81/171 (47%), Gaps = 21/171 (12%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
+GI+GG + +STL K +++S E+ + F EL+ + +F G
Sbjct: 4 IGIIGGTTPESTLYYYKKYIEISREKFEKYFY--------PELIIYS-INFKEFFQNPEG 54
Query: 143 VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKEL 202
+ +++ + LE+AGA I + H+ D+V + +VP + + + VA+E+
Sbjct: 55 WEGRKKILINAAKA----LERAGAELIAFAANTPHLVFDDVQREVNVPMVSIIDAVAEEI 110
Query: 203 KEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ ++ ++ +L +TA FY + L+ +G EVV+P+ E
Sbjct: 111 LKRGVR--------KVLLLGTKTTMTADFYIKTLEEKGLEVVVPNDEEKEE 153
>gi|228994390|ref|ZP_04154269.1| Aspartate racemase [Bacillus pseudomycoides DSM 12442]
gi|228765351|gb|EEM14026.1| Aspartate racemase [Bacillus pseudomycoides DSM 12442]
Length = 226
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+E +GA CI+M + H + +EV + S+P LH+ + A+E+ E ++K RIG+
Sbjct: 69 IECSGADCILMCSNTVHQFAEEVEQAISIPLLHIGDVSAEEIVEHDVK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDK 248
L + FY+ +L + G E ++P K
Sbjct: 121 LGTKQTMEQDFYKTRLANYGVETIIPKK 148
>gi|450007345|ref|ZP_21827720.1| putative amino acid recemase [Streptococcus mutans NMT4863]
gi|449186420|gb|EMB88251.1| putative amino acid recemase [Streptococcus mutans NMT4863]
Length = 230
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 23/170 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGE--ENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG S +ST + QL E + + L + LL S D +
Sbjct: 2 KTIGLIGGMSWESTTSYY----QLINETIKKELGGLHSAKILL----YSVDFAEIEHYQA 53
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
G D + E L + LE+AGA IV+ + H ++ K ++P LH+++
Sbjct: 54 SG-----DWAKSAEVLSQIAQKLEQAGADFIVICTNTMHKVVPQIQKQIAIPILHIAQAT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDK 248
A+ L E ++ ++G+L +T FY+EKL G EV++PD+
Sbjct: 109 AEALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGLEVLIPDQ 150
>gi|303257154|ref|ZP_07343168.1| putative aspartate racemase [Burkholderiales bacterium 1_1_47]
gi|302860645|gb|EFL83722.1| putative aspartate racemase [Burkholderiales bacterium 1_1_47]
Length = 484
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 111/253 (43%), Gaps = 33/253 (13%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
+GIVGG +T++L K+ + + +ND + + + + DR+ + GG
Sbjct: 241 IGIVGGLGPAATVDLYDKITKATPAKNDQEHIKVA---VEQNPQIPDRTKY----LLHGG 293
Query: 143 VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKEL 202
V D +L + RK LEK IV+ C+ +H + + + SVP +++ + +E+
Sbjct: 294 V--DPTLSLYAACRK---LEKDAVDAIVIACNTAHAYFETIVPHLSVPLINMQQVTLEEI 348
Query: 203 KEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDAL 262
++ + G + IG++A + + G Y K + +V+PDK EH +
Sbjct: 349 RD------KFGPDVVIGLMATDGTIETGIYGRKAKSMKLAMVVPDK---EHQAMVMEAIY 399
Query: 263 NRKDVEGARN-------LLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLL-----KKC 310
K V+ LL+ A ++ + +IL ++ +L D +
Sbjct: 400 GEKGVKAGFTDGHCKEVLLKAAEHLVRDKGAQALILGCTELPLILEETDNIKLGDGHAAI 459
Query: 311 IDPMDALARSTIK 323
+DP +LAR +K
Sbjct: 460 VDPTASLARRVVK 472
>gi|163756473|ref|ZP_02163586.1| aspartate racemase [Kordia algicida OT-1]
gi|161323581|gb|EDP94917.1| aspartate racemase [Kordia algicida OT-1]
Length = 229
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 19/171 (11%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGG 141
T+G++GG + ST+ L L+ + P + ++N S D L G
Sbjct: 3 TIGLIGGITSQSTILYYQILNNLAAKHKGEPH--AAKCIIN----SVDFGEIQKLQHDGR 56
Query: 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
LDD ++ E + LEKAGA CI++ + H+ D V K S+P +H++E A++
Sbjct: 57 WDLLDD-IMAETAKS----LEKAGAECILICANTMHLTIDAVRKSVSIPVIHIAEATAEK 111
Query: 202 LKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
+ E + I +L + FY+ L G + ++P++A E
Sbjct: 112 ILEKKLNT--------IALLGTKYTMEKDFYKAVLASFGIKTLIPNEAERE 154
>gi|196041448|ref|ZP_03108741.1| probable amino-acid racemase [Bacillus cereus NVH0597-99]
gi|196027696|gb|EDX66310.1| probable amino-acid racemase [Bacillus cereus NVH0597-99]
Length = 224
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 107/250 (42%), Gaps = 46/250 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I MPC+ +H++ +E+ + S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGASFIAMPCNTAHLYFEELQQSLSIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + K + E + R+ +LA A + +G YQ+ + E + ++ +
Sbjct: 103 IVDETLKAIPE---------TAKRVALLATEATVQSGIYQDGIAKRNIEYIHYEQ--WQE 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDP 313
++ + + ++E AR L AL + L V+T I+A D+ + D +D
Sbjct: 152 SINQIISYIKGGEIEKARKLWN-ALVLQLRDEVDTAIIACTDLNVVASED------FVDS 204
Query: 314 MDALARSTIK 323
LA++ ++
Sbjct: 205 SQCLAKAVVR 214
>gi|389684085|ref|ZP_10175416.1| aspartate racemase [Pseudomonas chlororaphis O6]
gi|388552424|gb|EIM15686.1| aspartate racemase [Pseudomonas chlororaphis O6]
Length = 232
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 113/257 (43%), Gaps = 35/257 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNC-- 138
T+G++GG S +S+ + Q N PL + LL + F +
Sbjct: 2 RTIGLIGGMSWESSAEYYRLINQQV--RNRL------GPLRSARLLMYS-VDFGPVEQAQ 52
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
G L ++V+ RR LE GA C+V+ + H +++ SVPFLH+++
Sbjct: 53 HAGRWDLAAEILVDAARR----LEAGGAECVVLCTNTMHKVAEQIQAVLSVPFLHIADPT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME--HTLI 256
A+ LEAG+ L +G+L + F +++L G +V++PD + H +I
Sbjct: 109 AE-------AALEAGT-LSVGLLGTAFTMEQDFLKQRLVDRGLKVLVPDAVDRQVVHRII 160
Query: 257 PALDALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD---PLLKKCID 312
D L + E +R + +Q L+ R +IL ++ LL P+ PLL D
Sbjct: 161 --YDELCVGVISETSRQRYQQVIQALMDRGAQVIILGCTEIGLLLKPEHSPLPLL----D 214
Query: 313 PMDALARSTIKWVKSAE 329
+ AR+ + + E
Sbjct: 215 TTELHARAAVAFALEGE 231
>gi|229169488|ref|ZP_04297193.1| amino-acid racemase [Bacillus cereus AH621]
gi|423591264|ref|ZP_17567295.1| aspartate racemase [Bacillus cereus VD048]
gi|228613987|gb|EEK71107.1| amino-acid racemase [Bacillus cereus AH621]
gi|401233411|gb|EJR39904.1| aspartate racemase [Bacillus cereus VD048]
Length = 224
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 108/254 (42%), Gaps = 46/254 (18%)
Query: 83 VGIVGGASVDSTL----NLLGKLVQLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST ++ K + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAKCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE G I MPC+ +H++ +E+ + ++P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGVDFIAMPCNTAHLYFEELQRSITIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + K + E N K R+ ++A A + AG YQ+ + E V ++ +
Sbjct: 103 IVDETLKAIPE-NTK--------RVAIIATEATVQAGIYQDGIAKRNIEYVHNEQ--WQE 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDP 313
+ + + ++E AR L + L + L V+T I+A D+ ++ D +D
Sbjct: 152 MINQIISCIKGGEIEEARKLWSV-LVLQLKDEVDTAIIACTDLNVVVSED------FVDS 204
Query: 314 MDALARSTIKWVKS 327
LA++ ++ S
Sbjct: 205 AQCLAKAVVRMYAS 218
>gi|424885049|ref|ZP_18308660.1| aspartate racemase [Rhizobium leguminosarum bv. trifolii WSM2012]
gi|424886423|ref|ZP_18310031.1| aspartate racemase [Rhizobium leguminosarum bv. trifolii WSM2012]
gi|393175774|gb|EJC75816.1| aspartate racemase [Rhizobium leguminosarum bv. trifolii WSM2012]
gi|393176811|gb|EJC76852.1| aspartate racemase [Rhizobium leguminosarum bv. trifolii WSM2012]
Length = 239
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 27/181 (14%)
Query: 81 NTVGIVGGASVDST---LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLN 137
+T+G++GG S +S+ L+ ++V+ L + EL+ H + + +
Sbjct: 2 DTIGLIGGMSFESSAVYYRLVNEMVRAR-----------KGGLASAELILHSVNFEAIVA 50
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
+ G D + L + L+ GA C+++ + H+ DEV SVP +H+ +
Sbjct: 51 LQKAG---DWDMAARRLADVALRLQVGGAGCVLICTNTMHLIADEVAAKISVPLIHIIDE 107
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA--TMEHTL 255
AK L A K PL +LA + GFY E+++ G ++++PD A T H +
Sbjct: 108 TAKSLHAAGRK-----RPL---LLATRYTMEHGFYAERMKGLGIDIMVPDAADRTTVHDI 159
Query: 256 I 256
I
Sbjct: 160 I 160
>gi|212223950|ref|YP_002307186.1| aspartate racemase [Thermococcus onnurineus NA1]
gi|212008907|gb|ACJ16289.1| hypothetical aspartate racemase [Thermococcus onnurineus NA1]
Length = 226
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 21/171 (12%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
+GI+GG + +ST + +++S E+ F EL+ + +F G
Sbjct: 4 IGIIGGMTPESTCYYYRRYIEISREKFGKHFY--------PELIIYS-INFKEFFENPEG 54
Query: 143 VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKEL 202
+ +++ + L++AGA I M + H +V K +VP + + E VA+E+
Sbjct: 55 WEGRKKILINAAKA----LKRAGAEIIAMSANTPHKVFPDVQKEVNVPMVSIIEAVAEEI 110
Query: 203 KEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
K +K R+ +L +++ FY L+ EGFEVV+P + E
Sbjct: 111 KRRGIK--------RVLLLGTKTTMSSDFYVNALREEGFEVVVPSEEEQER 153
>gi|320332988|ref|YP_004169699.1| aspartate racemase [Deinococcus maricopensis DSM 21211]
gi|319754277|gb|ADV66034.1| aspartate racemase [Deinococcus maricopensis DSM 21211]
Length = 243
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 30/175 (17%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLS---GEENDFPFLLCSDPLL---NKELLSHDRSSFS 134
TVG++GG D+TL+ K+++ S E++ L+ ++P + N L S
Sbjct: 3 RTVGVLGGLGPDATLDFFAKVLRASRAEREQDHLRLLIDNNPQVPDRNAALTGRGASPGP 62
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
+L G LE AGA +VM C+ +H + ++ VPF+ +
Sbjct: 63 ALAGMARG------------------LEAAGADFLVMVCNTAHAYQADIEAAVRVPFVSL 104
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
+ E A ++ + +G+LA L AG YQ G ++ PD A
Sbjct: 105 ID----ETVHATLRAVPGARA--VGLLATTTCLDAGLYQRAFAPHGVRMIEPDAA 153
>gi|126642247|ref|YP_001085231.1| aspartate racemase [Acinetobacter baumannii ATCC 17978]
Length = 218
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LEKAGA CI++ + H ++ +VPF+H+++ AKE+ N++ ++ +
Sbjct: 47 LEKAGADCILVCTNTMHKVAPQIEDAITVPFIHIADATAKEILSQNIR--------KVAL 98
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKAT--MEHTLI 256
L + FY+ +LQ G EV++P+ A + H++I
Sbjct: 99 LGTAFTMEQDFYKARLQDLGIEVIIPNDANRKIVHSII 136
>gi|410866856|ref|YP_006981467.1| Aspartate/glutamate racemase [Propionibacterium acidipropionici
ATCC 4875]
gi|410823497|gb|AFV90112.1| Aspartate/glutamate racemase [Propionibacterium acidipropionici
ATCC 4875]
Length = 229
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 100/231 (43%), Gaps = 32/231 (13%)
Query: 81 NTVGIVGGASVDSTLNLL----GKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSL 136
T+G++GG S S+ + ++ + G + P LL S E L
Sbjct: 2 KTIGVLGGMSWKSSADWYRMANEQVHETLGGYHSTPILLDSLDFAEIEALQ--------- 52
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+ G + +++ E+ +R LE AGA IV+ + HI D + VPFLH+ +
Sbjct: 53 --ESGDWEDAGAILAEHAKR----LEAAGAGLIVLCTNTMHIVADRITAAIGVPFLHIGD 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEH 253
A+ + A + +GVL + + FY+++L G ++P D+AT+
Sbjct: 107 TTAEAITAAGLST--------VGVLGTSFTMEQPFYRDRLAAHGITSLVPEDADRATVHR 158
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
+ L ++ + +R R ++ L+ R +IL +++ L+ D
Sbjct: 159 IIFDEL--VHGIVTDQSRRAYREVIRRLVDRGAEGIILGCTEIELLIGRAD 207
>gi|118479884|ref|YP_897035.1| aspartate racemase [Bacillus thuringiensis str. Al Hakam]
gi|376268690|ref|YP_005121402.1| Amino acid racemase RacX [Bacillus cereus F837/76]
gi|118419109|gb|ABK87528.1| aspartate racemase [Bacillus thuringiensis str. Al Hakam]
gi|364514490|gb|AEW57889.1| Amino acid racemase RacX [Bacillus cereus F837/76]
Length = 224
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 97/223 (43%), Gaps = 40/223 (17%)
Query: 83 VGIVGGASVDSTL----NLLGKLVQLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST ++ K + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAKCQTIYGAKHDIDFPHMMIYSCPTPFYMDHPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I MPC+ +H++ E+ + S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGASFIAMPCNTAHLYFKELQQSISIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + + + E N K R+ +LA A + AG YQ+ + E + +K +
Sbjct: 103 IVDETLQVIPE-NTK--------RVALLATEATVQAGIYQDGIAKRNIEYIHHEK--WQE 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
++ + + ++E AR L AL + L V+T I+A D+
Sbjct: 152 SINQIISCIKGGEIEKARELWN-ALVLQLKDEVDTAIIACTDL 193
>gi|1061000|dbj|BAA32489.1| fomE [Streptomyces wedmorensis]
Length = 233
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 93/226 (41%), Gaps = 27/226 (11%)
Query: 73 SDALLNQANTVGIVGGASVDSTLNLLGKLVQ--LSGEENDFP-FLLCSDPLLNKELLSHD 129
S+A ++ +GI+GG + N +LV+ +G + + P LL S P + L H
Sbjct: 2 SNAAIDHWQKIGIIGGLGPLACANFYMRLVEQTTAGSDQEHPEVLLLSSPAIPSRL-DHL 60
Query: 130 RSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSV 189
S D VE L+ L+ AGA+ I MP + ++DEV V
Sbjct: 61 LS--------------DGPSPVEQLQAVARRLQDAGAQLIAMPSVTTQAYYDEVSAAVDV 106
Query: 190 PFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
P + + VA L+EA + LR + + L G L G V PD A
Sbjct: 107 PVVDMLRVVAAGLREAGV--------LRPALAVTDGALKLGLLHRALVDAGLTPVYPDPA 158
Query: 250 TMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDD 295
T + + ++ + V+ A LR A++ R + V++ D
Sbjct: 159 T-QREIQECVEMVKSGRVQEASAQLRKAVEGEWTRPGDGVVVGCTD 203
>gi|397652676|ref|YP_006493257.1| aspartate racemase [Pyrococcus furiosus COM1]
gi|393190267|gb|AFN04965.1| aspartate racemase [Pyrococcus furiosus COM1]
Length = 228
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEE---NDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+G++GG + +ST K +++S ++ ++P LL + S + F +N +
Sbjct: 4 IGLIGGMTPESTCYYYRKYIEISRKKFRKYEYPELL---------IYSINFRDFF-MNPE 53
Query: 140 GGGVQLDDSLIVENLRRKRVF------LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
G RKR+ LE+AGA I + + HI D++ K SVP +
Sbjct: 54 GWE------------GRKRILINAAKALERAGAELIALTANTPHIVFDDIQKEISVPMVS 101
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + VA+E+ +K ++ +L +++GFY L+++G EVV+P++ E
Sbjct: 102 IIDAVAEEILSHGLK--------KVLLLETKTTMSSGFYVNALKNKGLEVVVPNEEEQEE 153
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
+ L ++++ R ++ + + V VIL ++
Sbjct: 154 LNRIIFEELAFENLKSKRWIIDLIERYAKEEGVEGVILGCTEL 196
>gi|206977308|ref|ZP_03238205.1| probable amino-acid racemase [Bacillus cereus H3081.97]
gi|206744459|gb|EDZ55869.1| probable amino-acid racemase [Bacillus cereus H3081.97]
Length = 224
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 95/223 (42%), Gaps = 40/223 (17%)
Query: 83 VGIVGGASVDSTL----NLLGKLVQLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST ++ K + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAKCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I MPC+ +H++ +E+ + S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGASFIAMPCNTAHLYFEELQQSLSIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + + + E + R+ +LA A + AG YQ+ + E + +K +
Sbjct: 103 IVDETLQAIPE---------TAKRVALLATEATVQAGIYQDGIAKRNIEYIHHEK--WQD 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
+ + + VE AR L AL + L V+T I+A D+
Sbjct: 152 MINQIITYIKSGKVEEARELWN-ALVLQLREEVDTAIIACTDL 193
>gi|289806464|ref|ZP_06537093.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. AG3]
Length = 115
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAG 213
L R LE AGA CIV+PC+ +H W D++ + + + ++
Sbjct: 25 LERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKARMISILDATLGDIPP--------- 75
Query: 214 SPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
S +G+LA NA L G YQ+K G ++ P+ A
Sbjct: 76 SARHVGLLATNATLATGLYQKKALARGLTLIQPEDA 111
>gi|423657700|ref|ZP_17632999.1| aspartate racemase [Bacillus cereus VD200]
gi|401288872|gb|EJR94607.1| aspartate racemase [Bacillus cereus VD200]
Length = 224
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 93/223 (41%), Gaps = 40/223 (17%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFIDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I MPC+ +H++ +E+ S+P LH
Sbjct: 61 --------------KAIIEGAQK----LESTGASFIAMPCNTAHLYFEELQDSLSIPILH 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + + + E + R+ +LA A + A YQ+ + E + T +
Sbjct: 103 IVDETLQAIPE---------TAKRVALLATEATVQADIYQDGIAKRNIEYI--HHETWQE 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
+ + + ++E A L AL + L V+TVI+A D+
Sbjct: 152 MINQIITCIKSGEIEKAHELWN-ALVLQLREEVDTVIIACTDL 193
>gi|335358001|ref|ZP_08549871.1| aspartate racemase [Lactobacillus animalis KCTC 3501]
Length = 238
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 107/256 (41%), Gaps = 27/256 (10%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSH----DRSSFSSL 136
N I+GG +T + + +L + D + N L++H DR+++
Sbjct: 3 NFFTIIGGMGTMATESYIHQLNLRTKAHQDQDYY-------NYTLVNHATVPDRTAYILD 55
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
N K + ++E+ ++ G +PC+ +H ++DE+ K VP LH+ +
Sbjct: 56 NTKPNPL----PELIEDFKQYATL----GPDFFTLPCNTAHYFYDELAKAVDVPILHMPK 107
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
E+K+ + EA ++G++A + Y +++ G+++ P A + T
Sbjct: 108 ETVAEIKK---RYPEAK---KVGLVATQGTIRDQIYDKEILAAGYDLAKPSPAVQKMTDE 161
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-KCIDPMD 315
D + +DV + + Q++ + VIL ++ L +P+ +D
Sbjct: 162 LIYDDIKEQDVVDGKLFHDLVAQMIQETGCDVVILGCTELS-LAQEREPITDLPIVDSQS 220
Query: 316 ALARSTIKWVKSAEKG 331
L TI+W +K
Sbjct: 221 TLVDRTIEWADKTQKS 236
>gi|384264093|ref|YP_005419800.1| aspartate racemase [Bacillus amyloliquefaciens subsp. plantarum YAU
B9601-Y2]
gi|387897006|ref|YP_006327302.1| putative amino-acid racemase [Bacillus amyloliquefaciens Y2]
gi|380497446|emb|CCG48484.1| aspartate racemase [Bacillus amyloliquefaciens subsp. plantarum YAU
B9601-Y2]
gi|387171116|gb|AFJ60577.1| putative amino-acid racemase [Bacillus amyloliquefaciens Y2]
Length = 226
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 101/225 (44%), Gaps = 44/225 (19%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSG--EENDFPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + K+V ++ G + DFP ++ C P + L+H
Sbjct: 2 IGILAGMGPKSTGPFVDKVVDECQKIYGAIHDMDFPHMMIYSCPTPFYMNKPLNH----- 56
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
+++++I V LEK G I +PC+ +HI+ +++ K SVP L+
Sbjct: 57 ---------TDMENAII-----EGAVKLEKTGVNFIAIPCNTAHIYFNQIKKSLSVPLLN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD--KATM 251
+ + K++ + + K +LA + +G +QE L EG++ + D + +
Sbjct: 103 MVDETIKKIPKGSKKA---------ALLATVPTVQSGIFQEALNREGYDFLHQDSWQIYV 153
Query: 252 EHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
+H ++ + + + A L L L V+TVI+A D+
Sbjct: 154 DHI----IEKIKQGQTDEAGTLYD-ELHRELAEKVDTVIIACTDL 193
>gi|423438197|ref|ZP_17415178.1| aspartate racemase [Bacillus cereus BAG4X12-1]
gi|401118577|gb|EJQ26407.1| aspartate racemase [Bacillus cereus BAG4X12-1]
Length = 224
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 110/250 (44%), Gaps = 46/250 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLVQ----LSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVTGCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMKK 61
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
+ I+E ++ LE GA I MPC+ +H++ +E+ + S+P L+
Sbjct: 62 A---------------IIEGAQK----LESTGASFIAMPCNTAHLYLEELQRSLSIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + + + E N+K R+ +LA A + + YQ+ + E + +K +
Sbjct: 103 IVDETLQAIPE-NIK--------RVALLATEATVQSRIYQDGITKRNIEYIHHEK--WQE 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDP 313
++ + + ++E AR L AL + L V+TVI+A D+ + D +D
Sbjct: 152 SINQIITCIKSGEIEEARELWN-ALVLQLREEVDTVIIACTDLNVVASED------FVDS 204
Query: 314 MDALARSTIK 323
LA++ ++
Sbjct: 205 SQCLAKAVVR 214
>gi|397697617|ref|YP_006535500.1| aspartate racemase protein [Pseudomonas putida DOT-T1E]
gi|397334347|gb|AFO50706.1| aspartate racemase protein [Pseudomonas putida DOT-T1E]
Length = 230
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELK-EANMKPLEAGSPLRIG 219
LE AGA C+++ H+ D V S+PF+H+ + VA LK + KPL
Sbjct: 71 LENAGADCVMICAVTMHLVADAVMAATSLPFIHIVDVVADRLKLVGHKKPL--------- 121
Query: 220 VLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
++A + GFY ++Q+ G +V++PD A
Sbjct: 122 LIATRYTMENGFYPARMQNHGIDVLVPDSA 151
>gi|331000797|ref|ZP_08324443.1| aspartate racemase [Parasutterella excrementihominis YIT 11859]
gi|329570325|gb|EGG52058.1| aspartate racemase [Parasutterella excrementihominis YIT 11859]
Length = 484
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 110/253 (43%), Gaps = 33/253 (13%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
+GIVGG +T++L K+ + + +ND + + + + DR+ + GG
Sbjct: 241 IGIVGGLGPAATVDLYDKITKATPAKNDQEHIKVA---VEQNPQIPDRTKY----LLHGG 293
Query: 143 VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKEL 202
V D +L + RK LEK IV+ C+ +H + + + SVP +++ + +E+
Sbjct: 294 V--DPTLSLYAACRK---LEKDAVDAIVIACNTAHAYFETIVPHLSVPLINMQQVTLEEI 348
Query: 203 KEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDAL 262
++ G + IG++A + + G Y K + +V+PDK EH +
Sbjct: 349 RD------RFGPDVVIGLMATDGTIETGIYGRKAKSMKLAMVVPDK---EHQAMVMEAIY 399
Query: 263 NRKDVEGARN-------LLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLL-----KKC 310
K V+ LL+ A ++ + +IL ++ +L D +
Sbjct: 400 GEKGVKAGFTDGHCKEVLLKAAEHLVRDKGAQALILGCTELPLILEETDNIKLGDGHAAI 459
Query: 311 IDPMDALARSTIK 323
+DP +LAR +K
Sbjct: 460 VDPTASLARRVVK 472
>gi|226325276|ref|ZP_03800794.1| hypothetical protein COPCOM_03068 [Coprococcus comes ATCC 27758]
gi|225206624|gb|EEG88978.1| aspartate racemase [Coprococcus comes ATCC 27758]
Length = 234
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 108/246 (43%), Gaps = 31/246 (12%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
+G++GG ++T +++ + E+D +N +LSH +++ +
Sbjct: 5 LGVIGGMGPEATSFYYARVIARTKAESD-------QEHINMIILSH-----ATMPDRTQA 52
Query: 143 VQLDDSL-IVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
+ + L ++ + + LE G I +PC+ SH + +++ K SVP +++ E +
Sbjct: 53 ILTGNKLPFLKAITQDARDLEMLGVENIAIPCNTSHYFLEDIQKSTSVPIINMVEESVRY 112
Query: 202 LKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDA 261
+ EA+ K +IG++ + + A Y + G V+P +A + + D
Sbjct: 113 VVEAHPK------VKKIGIMGTDGTMQAKTYHRACEKFGITPVVPGEACQKDVMSLIYDD 166
Query: 262 LNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDL-----LPPDDPLLKKCIDPMDA 316
+ +K G +N A L + + VILA ++ +P D C+D MD
Sbjct: 167 I-KKGKPGDKNKFDRAYNDLKAKGCDAVILACTEISVFKEYYQVPAD------CMDAMDV 219
Query: 317 LARSTI 322
L R +I
Sbjct: 220 LVRESI 225
>gi|452994003|emb|CCQ94473.1| putative racemase [Clostridium ultunense Esp]
Length = 232
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 30/183 (16%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEE----NDFPFLLCSDPLLNKELLSHDRSSFSSL 136
T+G++GG S +ST+ L Q E+ + +L S E L H+ + SL
Sbjct: 2 KTIGLIGGMSWESTMEYYRILNQKVKEKLGGFHSAELVLYSVDFEEIERLQHE-GDWESL 60
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
L+VE +R +E+ GA +++ + H DE+ K +PFLH+++
Sbjct: 61 T----------KLMVEAAKR----VERGGADFLLLCTNTMHKMADEMEKAIQIPFLHIAD 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKL-QHEGFEVVLP--DKATMEH 253
A +K A +K ++G+L + FY+ +L + G EV++P ++ M H
Sbjct: 107 ATAGRIKNAGLK--------KVGLLGTRFTMEQDFYKGRLIKKHGLEVIVPYDEEREMIH 158
Query: 254 TLI 256
+I
Sbjct: 159 HVI 161
>gi|56965360|ref|YP_177092.1| aspartate racemase [Bacillus clausii KSM-K16]
gi|56911604|dbj|BAD66131.1| aspartate racemase [Bacillus clausii KSM-K16]
Length = 226
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 75/174 (43%), Gaps = 37/174 (21%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + K V ++ G ND FP ++ C P + L+H
Sbjct: 2 IGILAGMGPKSTGPFVDKTVDQCQKIYGAVNDIDFPHMMIYSCPTPFYIDKPLNHKDMEM 61
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
+ +N KR LEK G I +PC+ +H++ D+V S+P L+
Sbjct: 62 AIIN-----------------GAKR--LEKTGVDFIAIPCNTAHVYFDQVKNSLSIPLLN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD 247
+ E K + E + K + +LA + +G +QE L EG+E + D
Sbjct: 103 MVEETIKRVPEHSKK---------VALLATIPTVQSGIFQEALAKEGYEFLHQD 147
>gi|24378582|ref|NP_720537.1| amino acid recemase [Streptococcus mutans UA159]
gi|449866516|ref|ZP_21779538.1| putative amino acid recemase [Streptococcus mutans U2B]
gi|449869698|ref|ZP_21780224.1| putative amino acid recemase [Streptococcus mutans 8ID3]
gi|449985942|ref|ZP_21819944.1| putative amino acid recemase [Streptococcus mutans NFSM2]
gi|450083304|ref|ZP_21852854.1| putative amino acid recemase [Streptococcus mutans N66]
gi|24376434|gb|AAN57843.1|AE014857_7 putative amino acid recemase [Streptococcus mutans UA159]
gi|449157834|gb|EMB61268.1| putative amino acid recemase [Streptococcus mutans 8ID3]
gi|449178550|gb|EMB80806.1| putative amino acid recemase [Streptococcus mutans NFSM2]
gi|449213560|gb|EMC13892.1| putative amino acid recemase [Streptococcus mutans N66]
gi|449263686|gb|EMC61051.1| putative amino acid recemase [Streptococcus mutans U2B]
Length = 230
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 8/89 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE+AGA IV+ + H ++ K ++P LH+++ A+ + E ++ ++G+
Sbjct: 71 LEQAGADFIVICTNTMHKVAPQIQKQIAIPILHIAQATAEAILENGIQ--------KVGL 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
L +T FY+EKL G EV++PD+A
Sbjct: 123 LGTKYTMTQDFYKEKLLEAGLEVLIPDQA 151
>gi|422338523|ref|ZP_16419483.1| putative aspartate racemase [Fusobacterium nucleatum subsp.
polymorphum F0401]
gi|355372439|gb|EHG19780.1| putative aspartate racemase [Fusobacterium nucleatum subsp.
polymorphum F0401]
Length = 231
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 100/228 (43%), Gaps = 26/228 (11%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGE--ENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
T+G++GG S +ST+ Q+ E +N L + +L S D K
Sbjct: 3 TIGLIGGMSWESTVTYY----QIINEVVKNKLGGLHSAKCVL----YSVDFEEIEECQKK 54
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G D E L + + LEKAGA IV+ + H + K +P LH++E A
Sbjct: 55 G-----DWDRSAEILGKVALSLEKAGADFIVICTNTMHKVVSGIKKYTKLPILHIAEMTA 109
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME--HTLIP 257
ELK+A +K +IG+L + FY++ L G EVV+P+ +E +++I
Sbjct: 110 IELKKAGIK--------KIGLLGTKYTMQQDFYKQILIDNGIEVVIPNSKDIEIVNSVIF 161
Query: 258 ALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDP 305
L + E LRI ++ L VIL ++ L+ +D
Sbjct: 162 NELCLGKIKKESKEEYLRI-IKDLSKAGAKGVILGCTEIGLLIKQEDT 208
>gi|423582962|ref|ZP_17559073.1| aspartate racemase [Bacillus cereus VD014]
gi|401210271|gb|EJR17023.1| aspartate racemase [Bacillus cereus VD014]
Length = 224
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 108/251 (43%), Gaps = 48/251 (19%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVANCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I MPC+ +H++ +E+ S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGASFIAMPCNTAHLYFEELQHSLSIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDK-ATME 252
+ + + + + N K R+ +LA A + +G YQ+ + E + +K TM
Sbjct: 103 IVDETLQAIPK-NTK--------RVALLATEATIQSGIYQDGIAKRNIEYIHYEKWQTMI 153
Query: 253 HTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCID 312
+ +I + + +VE AR L AL V L V T I+A D+ + D +D
Sbjct: 154 NQIITYIKS---GEVEEARKLWS-ALVVQLKDEVATAIIACTDLNVVASED------FVD 203
Query: 313 PMDALARSTIK 323
LA++ ++
Sbjct: 204 SSQCLAKAVVR 214
>gi|300767167|ref|ZP_07077079.1| aspartate racemase [Lactobacillus plantarum subsp. plantarum ATCC
14917]
gi|308180386|ref|YP_003924514.1| aspartate racemase [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|380032371|ref|YP_004889362.1| aspartate racemase [Lactobacillus plantarum WCFS1]
gi|418275047|ref|ZP_12890459.1| aspartate racemase [Lactobacillus plantarum subsp. plantarum NC8]
gi|300494986|gb|EFK30142.1| aspartate racemase [Lactobacillus plantarum subsp. plantarum ATCC
14917]
gi|308045877|gb|ADN98420.1| aspartate racemase [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|342241614|emb|CCC78848.1| aspartate racemase [Lactobacillus plantarum WCFS1]
gi|376009518|gb|EHS82846.1| aspartate racemase [Lactobacillus plantarum subsp. plantarum NC8]
Length = 248
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 106/252 (42%), Gaps = 22/252 (8%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
N GI+GG +T + + + +L+ D +L + +LN + + NC
Sbjct: 3 NCFGIIGGMGTMATEDFVHTVNRLTVTHRDQDYL--NYVILNDAEIPDRTAYILDHNCAN 60
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
+ +L L + G IVM C+ +H + + +VP L++ +A
Sbjct: 61 P---------LPSLEADVQLLNQLGVMFIVMTCNTAHYFIPALTALSNVPILNMP-ALAV 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALD 260
+ +P PLRIG+LA L + YQ+ ++ G V+P+K + D
Sbjct: 111 TAACRSQQP----RPLRIGILATTGTLESQLYQQLIRSNGHIPVIPNKQQQAQVMTLIYD 166
Query: 261 ALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM---QDLLPPDDPLLKKCIDPMDAL 317
+ ++D + Q+L + VIL ++ QD P D ++ ID L
Sbjct: 167 DIKQRDFVDRVKFHGLIDQLLNAADCDAVILGCTELSVAQDAAPYDS---ERIIDAQYEL 223
Query: 318 ARSTIKWVKSAE 329
AR+T++ ++ +
Sbjct: 224 ARATVQRAQATK 235
>gi|302542803|ref|ZP_07295145.1| aspartate racemase [Streptomyces hygroscopicus ATCC 53653]
gi|302460421|gb|EFL23514.1| aspartate racemase [Streptomyces himastatinicus ATCC 53653]
Length = 257
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 87/213 (40%), Gaps = 36/213 (16%)
Query: 78 NQANTVGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLL---NKELLSH--D 129
+A VGI+GG +T + KL++ + D P ++ +DP + LL H D
Sbjct: 14 GRALKVGILGGMGPAATADFYAKLIRATPAARDQDHVPVVIWADPTIPDRTAALLDHGAD 73
Query: 130 RSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEV-CKGCS 188
S + L+R ++ AGA I +PC+ +H + V
Sbjct: 74 PSPW--------------------LKRGAHYVALAGANLIAVPCNTAHAFLGAVRSAAAP 113
Query: 189 VPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDK 248
VP L + A+E+ A +P +G+LA LTA YQ L G + ++PD
Sbjct: 114 VPVLDMVAETAEEV--ARSQPGAT-----VGILATTGTLTAELYQNALSRCGLKPLIPDS 166
Query: 249 ATMEHTLIPALDALNRKDVEGARNLLRIALQVL 281
+ + D+ AR L+ AL+ L
Sbjct: 167 TAQQAVMSAIRQVKAGGDLAHARRLMSPALRSL 199
>gi|22125487|ref|NP_668910.1| resistance protein [Yersinia pestis KIM10+]
gi|21958382|gb|AAM85161.1|AE013762_3 putative resistance protein [Yersinia pestis KIM10+]
Length = 276
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 103/234 (44%), Gaps = 41/234 (17%)
Query: 83 VGIVGGASVDSTL---NLLGKLV--QLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLN 137
+G++GG S +ST+ ++ + V QL G L S ++ L S D L
Sbjct: 50 LGLIGGMSWESTIPYYRMINQHVKAQLGG--------LHSAKII---LYSVDFHEIEQLQ 98
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
KG D + L + L+ AGA IV+ + H D++ C +P LH+++
Sbjct: 99 AKG-----DWQTAAQLLSNAAISLKHAGAEVIVVCTNTMHKVADDIEAACGLPLLHIADA 153
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKL-QHEGFEVVLPDKATMEHTLI 256
A ++K+ + +IG+L + GFY+ +L + G EV+ PD E
Sbjct: 154 TAVQIKQQGID--------KIGLLGTRYTMEQGFYRGRLTEKHGIEVITPDDTDRE---- 201
Query: 257 PALDALNRKDV------EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
A++ + +++ E +R+ R ++ L + V +I ++ L+ D
Sbjct: 202 -AVNRIIYEELCLGIISETSRDAYRRVIKKLEAQGVQGIIFGCTEITLLVNAQD 254
>gi|116492431|ref|YP_804166.1| aspartate racemase [Pediococcus pentosaceus ATCC 25745]
gi|421894573|ref|ZP_16325060.1| aspartate racemase [Pediococcus pentosaceus IE-3]
gi|116102581|gb|ABJ67724.1| Aspartate racemase [Pediococcus pentosaceus ATCC 25745]
gi|385272488|emb|CCG90432.1| aspartate racemase [Pediococcus pentosaceus IE-3]
Length = 235
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 169 IVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILT 228
V+ C+ +H ++D++ K VP +H+ K +KE + + +IG++ +
Sbjct: 80 FVIACNTAHFFYDDLQKATDVPIVHMPRETVKHIKE------QYPNAKKIGIIGTPGTTS 133
Query: 229 AGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNT 288
G Y +L EGFEVV P KA + T D + +++ A I ++ + +
Sbjct: 134 DGIYDRELLAEGFEVVKPTKAIQDLTSKLIFDDIKEQNLVDAELFYHILKMMVEEQGADV 193
Query: 289 VILA 292
VIL
Sbjct: 194 VILG 197
>gi|18978047|ref|NP_579404.1| aspartate racemase [Pyrococcus furiosus DSM 3638]
gi|18893834|gb|AAL81799.1| putative aspartate racemase [Pyrococcus furiosus DSM 3638]
Length = 231
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEE---NDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+G++GG + +ST K +++S ++ ++P LL + S + F +N +
Sbjct: 7 IGLIGGMTPESTCYYYRKYIEISRKKFRKYEYPELL---------IYSINFRDFF-MNPE 56
Query: 140 GGGVQLDDSLIVENLRRKRVF------LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
G RKR+ LE+AGA I + + HI D++ K SVP +
Sbjct: 57 GWE------------GRKRILINAAKALERAGAELIALTANTPHIVFDDIQKEISVPMVS 104
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + VA+E+ +K ++ +L +++GFY L+++G EVV+P++ E
Sbjct: 105 IIDAVAEEILSHGLK--------KVLLLETKTTMSSGFYVNALKNKGLEVVVPNEEEQEE 156
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
+ L ++++ R ++ + + V VIL ++
Sbjct: 157 LNRIIFEELAFENLKSKRWIIDLIERYAKEEGVEGVILGCTEL 199
>gi|190892490|ref|YP_001979032.1| aspartate racemase [Rhizobium etli CIAT 652]
gi|190697769|gb|ACE91854.1| probable aspartate racemase protein [Rhizobium etli CIAT 652]
Length = 239
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
L+ AGA CI++ + H+ DEV SVP +H+ + AK L+ A K PL +
Sbjct: 71 LQAAGAGCILICTNTMHLIADEVAAKVSVPLIHIIDETAKSLQAAGRK-----RPL---L 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKA--TMEHTLI 256
LA + GFY E+++ G ++++P+ A T H +I
Sbjct: 123 LATRYTMEHGFYGERMKSLGLDIMVPEAADRTTVHDII 160
>gi|320528690|ref|ZP_08029842.1| aspartate racemase [Solobacterium moorei F0204]
gi|320130900|gb|EFW23478.1| aspartate racemase [Solobacterium moorei F0204]
Length = 236
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 78/179 (43%), Gaps = 10/179 (5%)
Query: 146 DDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEA 205
+++ + E + LE G+ CI +PC+ SH + D + K S+P +H+ K L +
Sbjct: 60 NENAVYERMLHDCHLLESCGSCCIAIPCNTSHYFADRLQKEISIPIIHMPRETVKRLVKT 119
Query: 206 NMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRK 265
N K ++ +LA + + G Y+ +++ G + PD + + D + R
Sbjct: 120 NHK--------KVAILATDGTIMTGVYRREIEAAGMQAWQPDAEIQKKVMSLIYDEIKRG 171
Query: 266 DVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIKW 324
+ +G R+ + + + IL ++ + L ID M+ LA I++
Sbjct: 172 E-KGNRHTFAAIDRAVRDAGCDCAILGCTELS-VYREYHGLPSFYIDAMEVLAEECIRF 228
>gi|213416637|ref|ZP_03349781.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E01-6750]
Length = 120
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAG 213
L R LE AGA CIV+PC+ +H W D++ + + + ++
Sbjct: 34 LERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKARMISILDATLGDIPP--------- 84
Query: 214 SPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
S +G+LA NA L G YQ+K G ++ P+ A
Sbjct: 85 SARHVGLLATNATLATGLYQKKALARGLTLIQPEDA 120
>gi|257077294|ref|ZP_05571655.1| aspartate racemase [Ferroplasma acidarmanus fer1]
Length = 230
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 96/215 (44%), Gaps = 31/215 (14%)
Query: 93 STLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSL 149
+T L ++ +L+ ND ++L SDP + + ++ + S ++ G+
Sbjct: 15 ATNQFLDRITELTDAANDQEHVRYILYSDPEIPDRIGAYFNGTKSPVDAINKGID----- 69
Query: 150 IVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKP 209
FLE+ G I +PC+ +HIW E G V L++ + K + ++ K
Sbjct: 70 ----------FLERNGITTIAIPCNTAHIWFSEFKAG--VNLLNMVDLTVKAILDSGYK- 116
Query: 210 LEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEG 269
G LA A + + Y + L+ G ++P++ E T++ A+ + ++
Sbjct: 117 -------HPGFLATTATIKSRLYIKNLEEAGISAIIPEQ---EDTVMQAVKLVKLGEISR 166
Query: 270 ARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
A+ L+ ++ L +++I+A ++ +L +D
Sbjct: 167 AKATLKPVVKELEDNGSDSIIMACTEIPVILNRED 201
>gi|384182567|ref|YP_005568329.1| aspartate racemase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324328651|gb|ADY23911.1| aspartate racemase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 224
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE GA I MPC+ +H++ +E+ + S+P L++ + + + + N+K R+ +
Sbjct: 70 LESTGASFIAMPCNTAHLYFEELQRSLSIPILNIVDETLQAIPK-NVK--------RVAL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQV 280
LA A + AG YQ+ + E + T + + + + ++E AR L AL +
Sbjct: 121 LATEATVQAGIYQDGITKRDIEYI--HHETWQEMINQIITWIKSGEIEEARELWN-ALVL 177
Query: 281 LLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIK 323
L V+T I+A D+ + D +D LA++ ++
Sbjct: 178 KLREEVDTAIIACTDLNVVASED------FVDSSQCLAKAIVR 214
>gi|269956674|ref|YP_003326463.1| aspartate racemase [Xylanimonas cellulosilytica DSM 15894]
gi|269305355|gb|ACZ30905.1| aspartate racemase [Xylanimonas cellulosilytica DSM 15894]
Length = 242
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 14/175 (8%)
Query: 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAG 213
L R LE GA +VMPC+ +H + +V + +VPF+ + + V E A + L A
Sbjct: 66 LARDAARLEGFGAELLVMPCNTAHYFTQQVLEAITVPFVSIID-VTVEAALARVPGLTA- 123
Query: 214 SPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDK--ATMEHTLIPAL--DALNRKDVEG 269
+G+LA + + Y + G EV+ PD T + +I A+ D + + +
Sbjct: 124 ----VGLLATAGTVASRVYHDAFAARGVEVLTPDDDGTTGDQAIINAVIYDQV-KAGLPA 178
Query: 270 ARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKC--IDPMDALARSTI 322
+ LR L+ R V+L ++ + D LL + +D MD L R+TI
Sbjct: 179 DADALRAVAARLVERGAGVVVLGCTELS-VAAVDHDLLDEAPFLDSMDQLVRATI 232
>gi|429081675|ref|ZP_19144777.1| Aspartate racemase [Cronobacter condimenti 1330]
gi|426549810|emb|CCJ70818.1| Aspartate racemase [Cronobacter condimenti 1330]
Length = 234
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 108/234 (46%), Gaps = 37/234 (15%)
Query: 81 NTVGIVGGASVDSTL---NLLGKLVQ--LSGEENDFPFLLCSDPLLNKELLSHDRSSFSS 135
TVG++GG S +ST+ L+ + V+ L G L S PLL + HD +
Sbjct: 2 KTVGLLGGMSWESTIPYYRLINEGVRDSLGG--------LHSAPLLLHSVDFHDIEA--- 50
Query: 136 LNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195
C+ G + E L + + LE+AGA+ IV+ + H ++ CS+PFLH++
Sbjct: 51 --CQASG---EWEKAGEILAQAALGLERAGAQAIVLCTNTMHKVAHQIEARCSLPFLHIA 105
Query: 196 ECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEV--VLPD---KAT 250
+ + ++ A ++ ++ +L + FY+ +L+ +GF V ++PD +A
Sbjct: 106 DATGRAIEHAGLR--------QVALLGTRYTMEQDFYRARLE-QGFGVTSLIPDETARAR 156
Query: 251 MEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
+ + L K ++ + +Q+L + VIL ++ LL P D
Sbjct: 157 INQIIFEEL--CLGKITPASKRYFQQQIQILADQGAQGVILGCTEIGLLLGPQD 208
>gi|27383265|ref|NP_774794.1| aspartate racemase [Bradyrhizobium japonicum USDA 110]
gi|27356439|dbj|BAC53419.1| aspartate racemase [Bradyrhizobium japonicum USDA 110]
Length = 229
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 19/166 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +ST L KL+ + D L S PLL + S+D + G
Sbjct: 2 RTIGLIGGMSWEST-ALYYKLI--NERVRDRMGKLHSAPLL---MYSYDFQEIKEMQYAG 55
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
+ SL E +R LE AGAR IV+ + H E+ ++PF+H+ + A+
Sbjct: 56 RWQEAASSL-AEVAQR----LESAGARAIVLCTNTMHKLAPEIVAKLTIPFVHIGDSTAQ 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
++ + R+G+L + FY ++L+ +V++P
Sbjct: 111 RIRSKGYR--------RVGLLGTKFTMEEDFYIDRLRAHDLDVLVP 148
>gi|332157981|ref|YP_004423260.1| aspartate racemase [Pyrococcus sp. NA2]
gi|331033444|gb|AEC51256.1| aspartate racemase [Pyrococcus sp. NA2]
Length = 226
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 80/171 (46%), Gaps = 21/171 (12%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
+GI+GG + +STL K +++S E+ F + P EL+ + +F G
Sbjct: 4 IGIIGGMTPESTLYYYQKYIEISREK----FEKYTYP----ELIIYS-INFREFFQNPDG 54
Query: 143 VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKEL 202
+ +++ + LE+AGA I M + H+ D+V K +VP + + + VA+ +
Sbjct: 55 WEGRKKILINAAKA----LERAGADIIAMSANTPHMVFDDVQKEVNVPMVSIIDAVAENV 110
Query: 203 KEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
K +K ++ +L +++ FY L+ G EVV+P+ E
Sbjct: 111 KRRGVK--------KVLLLGTKTTMSSDFYINALKERGLEVVVPNDEEKEE 153
>gi|294504656|ref|YP_003568718.1| resistance protein [Yersinia pestis Z176003]
gi|384123121|ref|YP_005505741.1| resistance protein [Yersinia pestis D106004]
gi|384126980|ref|YP_005509594.1| resistance protein [Yersinia pestis D182038]
gi|262362717|gb|ACY59438.1| resistance protein [Yersinia pestis D106004]
gi|262366644|gb|ACY63201.1| resistance protein [Yersinia pestis D182038]
gi|294355115|gb|ADE65456.1| resistance protein [Yersinia pestis Z176003]
Length = 263
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 103/234 (44%), Gaps = 41/234 (17%)
Query: 83 VGIVGGASVDSTL---NLLGKLV--QLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLN 137
+G++GG S +ST+ ++ + V QL G L S ++ L S D L
Sbjct: 37 LGLIGGMSWESTIPYYRMINQHVKAQLGG--------LHSAKII---LYSVDFHEIEQLQ 85
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
KG D + L + L+ AGA IV+ + H D++ C +P LH+++
Sbjct: 86 AKG-----DWQTAAQLLSNAAISLKHAGAEVIVVCTNTMHKVADDIEAACGLPLLHIADA 140
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKL-QHEGFEVVLPDKATMEHTLI 256
A ++K+ + +IG+L + GFY+ +L + G EV+ PD E
Sbjct: 141 TAVQIKQQGID--------KIGLLGTRYTMEQGFYRGRLTEKHGIEVITPDDTDRE---- 188
Query: 257 PALDALNRKDV------EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
A++ + +++ E +R+ R ++ L + V +I ++ L+ D
Sbjct: 189 -AVNRIIYEELCLGIISETSRDAYRRVIKKLEAQGVQGIIFGCTEITLLVNAQD 241
>gi|409993081|ref|ZP_11276237.1| aspartate racemase [Arthrospira platensis str. Paraca]
gi|409936052|gb|EKN77560.1| aspartate racemase [Arthrospira platensis str. Paraca]
Length = 262
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 14/171 (8%)
Query: 160 FLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIG 219
LE AGA +V+ C+ SH ++D V ++P++H+ + + +K L R+G
Sbjct: 81 ILEVAGADFLVITCNTSHGFYDLVQSQLNIPWIHIMQATVRFIK------LHYPELNRVG 134
Query: 220 VLAKNAILTAGFYQEKLQHEGFEVVLP--------DKATMEHTLIPALDALNRKDVEGAR 271
+LA N L A YQ+ L G + P D + I + A + +
Sbjct: 135 ILATNGTLQAHLYQDSLTAAGLTAIAPILNSELQQDIMNAIYHPIWGIKATGVQILPPPI 194
Query: 272 NLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTI 322
N+L+ A++ L + + +I ++ +L D IDP++ LA T+
Sbjct: 195 NILKTAVKWLENQGADLLIAGCTEISVVLKLLDTSSLIAIDPLEILANLTL 245
>gi|336315222|ref|ZP_08570133.1| aspartate racemase [Rheinheimera sp. A13L]
gi|335880199|gb|EGM78087.1| aspartate racemase [Rheinheimera sp. A13L]
Length = 239
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 105/227 (46%), Gaps = 23/227 (10%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +ST+ ++ Q ++ L S ++ L S D + L G
Sbjct: 2 KTIGLIGGMSWESTIPYYRQINQCIKQQLGG---LHSGKII---LYSVDFAEIEQLQRSG 55
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
+ + L LR L+ AGA CIV+ + H + ++P LH+++ A+
Sbjct: 56 EWDKAGEVLAHAALR-----LQAAGADCIVLCTNTMHKVAASIEAAVTIPLLHIADATAE 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKL-QHEGFEVVLPDKATME--HTLIP 257
+++A +K ++ +L + FY+++L +H G EV++PD+A H +I
Sbjct: 111 AIEQAGLK--------KVALLGTRFTMEQDFYKKRLTEHYGLEVLVPDEAARAGVHQVIY 162
Query: 258 ALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
L E +R L + + L+V+ +IL ++ L+ +D
Sbjct: 163 QELCLGIVKPE-SRLLYQQIMADLVVQGAEAIILGCTEIGLLVSAED 208
>gi|116252958|ref|YP_768796.1| aspartate racemase [Rhizobium leguminosarum bv. viciae 3841]
gi|115257606|emb|CAK08703.1| putative aspartate racemase [Rhizobium leguminosarum bv. viciae
3841]
Length = 239
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
L+ AGA CI++ + H+ D+V + SVP +H+ + AK L A K PL +
Sbjct: 71 LQIAGAGCILICTNTMHLIADKVAEKISVPLIHIIDETAKSLHAAGRK-----RPL---L 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKA--TMEHTLI 256
LA + GFY ++++ GF++++PD + T H +I
Sbjct: 123 LATRYTMEHGFYSDRMKSLGFDIMVPDASDRTTVHDII 160
>gi|423634357|ref|ZP_17610010.1| aspartate racemase [Bacillus cereus VD156]
gi|401281143|gb|EJR87057.1| aspartate racemase [Bacillus cereus VD156]
Length = 224
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 108/251 (43%), Gaps = 48/251 (19%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVANCQTIYGAKHDMEFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I MPC+ +H++ +E+ S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGASFIAMPCNTAHLYFEELQHSLSIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDK-ATME 252
+ + + + + N K R+ +LA A + +G YQ+ + E + +K TM
Sbjct: 103 IVDETLQAIPK-NTK--------RVALLATEATIQSGIYQDGIAKRNIEYIHYEKWQTMI 153
Query: 253 HTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCID 312
+ +I + + +VE AR L + L V L V T I+A D+ + D +D
Sbjct: 154 NQIITYIQS---GEVEEARKLWSV-LVVQLKDEVATAIIACTDLNVVASED------FVD 203
Query: 313 PMDALARSTIK 323
LA++ ++
Sbjct: 204 SSQCLAKAVVR 214
>gi|237745210|ref|ZP_04575691.1| aspartate racemase [Fusobacterium sp. 7_1]
gi|289764682|ref|ZP_06524060.1| aspartate racemase [Fusobacterium sp. D11]
gi|422933113|ref|ZP_16966037.1| aspartate racemase [Fusobacterium nucleatum subsp. animalis ATCC
51191]
gi|229432439|gb|EEO42651.1| aspartate racemase [Fusobacterium sp. 7_1]
gi|289716237|gb|EFD80249.1| aspartate racemase [Fusobacterium sp. D11]
gi|339891724|gb|EGQ80672.1| aspartate racemase [Fusobacterium nucleatum subsp. animalis ATCC
51191]
Length = 231
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 78/173 (45%), Gaps = 23/173 (13%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGE--ENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
T+G++GG S +ST+ Q+ E +N L + +L S D K
Sbjct: 3 TIGLIGGMSWESTVTYY----QIINEVVKNKLGGLHSAKCVL----YSVDFEEIEECQKK 54
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G D E L + + LEKAGA IV+ + H + K +P LH++E A
Sbjct: 55 G-----DWDRSAEILGKVALSLEKAGADFIVICTNTMHKVVSGIKKYTKLPILHIAEMTA 109
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
ELK+A +K +IG+L + FY++ L G EVV+P+ +E
Sbjct: 110 IELKKAGIK--------KIGLLGTKYTMQQDFYKQILIDNGIEVVIPNSKDIE 154
>gi|45442194|ref|NP_993733.1| aspartate/glutamate racemase [Yersinia pestis biovar Microtus str.
91001]
gi|108808080|ref|YP_651996.1| putative aspartate/glutamate racemase [Yersinia pestis Antiqua]
gi|108812350|ref|YP_648117.1| aspartate/glutamate racemase [Yersinia pestis Nepal516]
gi|145599280|ref|YP_001163356.1| aspartate/glutamate racemase [Yersinia pestis Pestoides F]
gi|149365232|ref|ZP_01887267.1| putative aspartate/glutamate racemase [Yersinia pestis CA88-4125]
gi|162419967|ref|YP_001604978.1| aspartate racemase family protein [Yersinia pestis Angola]
gi|165925365|ref|ZP_02221197.1| aspartate racemase family protein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|166008162|ref|ZP_02229060.1| aspartate racemase family protein [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166214217|ref|ZP_02240252.1| aspartate racemase family protein [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167399552|ref|ZP_02305076.1| aspartate racemase family protein [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167421217|ref|ZP_02312970.1| aspartate racemase family protein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167424711|ref|ZP_02316464.1| aspartate racemase family protein [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167469270|ref|ZP_02333974.1| resistance protein [Yersinia pestis FV-1]
gi|186896025|ref|YP_001873137.1| aspartate racemase [Yersinia pseudotuberculosis PB1/+]
gi|218929830|ref|YP_002347705.1| aspartate/glutamate racemase [Yersinia pestis CO92]
gi|229838326|ref|ZP_04458485.1| putative aspartate/glutamate racemase [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229895356|ref|ZP_04510529.1| putative aspartate/glutamate racemase [Yersinia pestis Pestoides A]
gi|229898892|ref|ZP_04514037.1| putative aspartate/glutamate racemase [Yersinia pestis biovar
Orientalis str. India 195]
gi|229902707|ref|ZP_04517824.1| putative aspartate/glutamate racemase [Yersinia pestis Nepal516]
gi|384414054|ref|YP_005623416.1| putative aspartate/glutamate racemase [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|45437058|gb|AAS62610.1| putative aspartate/glutamate racemase [Yersinia pestis biovar
Microtus str. 91001]
gi|108775998|gb|ABG18517.1| aspartate/glutamate racemase [Yersinia pestis Nepal516]
gi|108779993|gb|ABG14051.1| putative aspartate/glutamate racemase [Yersinia pestis Antiqua]
gi|115348441|emb|CAL21377.1| putative aspartate/glutamate racemase [Yersinia pestis CO92]
gi|145210976|gb|ABP40383.1| aspartate/glutamate racemase [Yersinia pestis Pestoides F]
gi|149291645|gb|EDM41719.1| putative aspartate/glutamate racemase [Yersinia pestis CA88-4125]
gi|162352782|gb|ABX86730.1| aspartate racemase family protein [Yersinia pestis Angola]
gi|165922972|gb|EDR40123.1| aspartate racemase family protein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165992544|gb|EDR44845.1| aspartate racemase family protein [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166204573|gb|EDR49053.1| aspartate racemase family protein [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166960706|gb|EDR56727.1| aspartate racemase family protein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167052056|gb|EDR63464.1| aspartate racemase family protein [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167056593|gb|EDR66362.1| aspartate racemase family protein [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|186699051|gb|ACC89680.1| aspartate racemase [Yersinia pseudotuberculosis PB1/+]
gi|229680154|gb|EEO76253.1| putative aspartate/glutamate racemase [Yersinia pestis Nepal516]
gi|229688440|gb|EEO80511.1| putative aspartate/glutamate racemase [Yersinia pestis biovar
Orientalis str. India 195]
gi|229694692|gb|EEO84739.1| putative aspartate/glutamate racemase [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229701664|gb|EEO89690.1| putative aspartate/glutamate racemase [Yersinia pestis Pestoides A]
gi|320014558|gb|ADV98129.1| putative aspartate/glutamate racemase [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 231
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 103/235 (43%), Gaps = 41/235 (17%)
Query: 83 VGIVGGASVDSTL---NLLGKLV--QLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLN 137
+G++GG S +ST+ ++ + V QL G L S ++ L S D L
Sbjct: 5 LGLIGGMSWESTIPYYRMINQHVKAQLGG--------LHSAKII---LYSVDFHEIEQLQ 53
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
KG D + L + L+ AGA IV+ + H D++ C +P LH+++
Sbjct: 54 AKG-----DWQTAAQLLSNAAISLKHAGAEVIVVCTNTMHKVADDIEAACGLPLLHIADA 108
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKL-QHEGFEVVLPDKATMEHTLI 256
A ++K+ + +IG+L + GFY+ +L + G EV+ PD E
Sbjct: 109 TAVQIKQQGID--------KIGLLGTRYTMEQGFYRGRLTEKHGIEVITPDDTDRE---- 156
Query: 257 PALDALNRKDV------EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDP 305
A++ + +++ E +R+ R ++ L + V +I ++ L+ D
Sbjct: 157 -AVNRIIYEELCLGIISETSRDAYRRVIKKLEAQGVQGIIFGCTEITLLVNAQDA 210
>gi|261822403|ref|YP_003260509.1| aspartate racemase [Pectobacterium wasabiae WPP163]
gi|261606416|gb|ACX88902.1| aspartate racemase [Pectobacterium wasabiae WPP163]
Length = 236
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 106/231 (45%), Gaps = 27/231 (11%)
Query: 80 ANTVGIVGGASVDSTL---NLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSL 136
+ T+G++GG S +ST+ ++ + V +N L + +L+ S D L
Sbjct: 3 SKTLGLIGGMSWESTIPYYRIINEYV-----KNQLGGLHSAKIILH----SVDFHEIEQL 53
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+G Q + ++ N+ V L +AGA IV+ + H D+V + +P LH+++
Sbjct: 54 QSQGDWAQA--AAVLGNIA---VGLRQAGADAIVICTNTMHKVADDVERASQLPLLHIAD 108
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEHTL 255
LK+ +K ++G+L + FY++++Q G +V++PD+A E
Sbjct: 109 ATGASLKQHGLK--------KVGLLGTRYTMEQDFYRQRIQERFGVDVIVPDQAGKEAVN 160
Query: 256 IPALDALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDP 305
D L ++ + +R + R +Q L + +IL ++ L+ D
Sbjct: 161 RIIYDELCLGNINDTSRLVYRGIIQQLEQQGAEGIILGCTEIPLLISAQDA 211
>gi|448821053|ref|YP_007414215.1| Aspartate racemase [Lactobacillus plantarum ZJ316]
gi|448274550|gb|AGE39069.1| Aspartate racemase [Lactobacillus plantarum ZJ316]
Length = 248
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 22/252 (8%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
N GI+GG +T + + + +L+ D +L + +LN + + NC
Sbjct: 3 NCFGIIGGMGTMATEDFVHTVNRLTVTHRDQDYL--NYVILNDAEIPDRTAYILDHNCAN 60
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
+ +L L + G IVM C+ +H + + +VP L++ +A
Sbjct: 61 P---------LPSLEADVQLLNQLGVMFIVMTCNTAHYFIPALTALSNVPILNMP-ALAV 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALD 260
+ +P PLRIG+LA L + YQ+ ++ G V+P+K + D
Sbjct: 111 TAACRSQQP----RPLRIGILATTGTLESQLYQQLIRSNGHIPVIPNKQQQAQVMTLIYD 166
Query: 261 ALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM---QDLLPPDDPLLKKCIDPMDAL 317
+ ++D + Q+L VIL ++ QD P D ++ ID L
Sbjct: 167 DIKQRDFVDRVKFHGLIDQLLNAADCGAVILGCTELSVAQDAAPYDS---ERIIDAQYEL 223
Query: 318 ARSTIKWVKSAE 329
AR+T++ ++ +
Sbjct: 224 ARATVQRAQATK 235
>gi|444377761|ref|ZP_21176969.1| Aspartate racemase [Enterovibrio sp. AK16]
gi|443678132|gb|ELT84805.1| Aspartate racemase [Enterovibrio sp. AK16]
Length = 236
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 76/171 (44%), Gaps = 27/171 (15%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLS----GEENDFPFLLCSDPLLNKELLSHDRSSFSSL 136
T+G++GG S +ST L Q + G + L+ S F+ +
Sbjct: 2 KTIGLIGGMSWESTATYYRLLNQYTREALGGHHSAKILMSS-------------VDFAEI 48
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+ D+S + L + LE AGA +++ + H EV S+P LH+++
Sbjct: 49 EAQQRADAWDES--AKQLAGEARKLEAAGADFMLIGTNTMHKVASEVQDAISIPLLHIAD 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD 247
A++LKE ++K +G+L ++ FY+E+L G +V +P+
Sbjct: 107 ATAQKLKEDDIK--------HVGLLGTRFTMSQPFYKERLTSHGIQVTVPE 149
>gi|423138332|ref|ZP_17125975.1| aspartate racemase [Fusobacterium nucleatum subsp. animalis F0419]
gi|371958370|gb|EHO76089.1| aspartate racemase [Fusobacterium nucleatum subsp. animalis F0419]
Length = 231
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 99/228 (43%), Gaps = 26/228 (11%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGE--ENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
T+G++GG S +ST+ Q+ E +N L + +L S D K
Sbjct: 3 TIGLIGGMSWESTVTYY----QIINEVVKNKLGGLHSAKCVL----YSVDFEEIEECQKK 54
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G D E L + + LEKAGA IV+ + H + K +P LH++E A
Sbjct: 55 G-----DWDRSAEILGKVALSLEKAGADFIVICTNTMHKVVSGIKKYTKLPILHIAEMTA 109
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME--HTLIP 257
ELK+A +K +IG+L + FY++ L G EVV+P+ +E +++I
Sbjct: 110 IELKKAGIK--------KIGLLGTKYTMQQDFYKQILIDNGIEVVIPNSKDIEIVNSVIF 161
Query: 258 ALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDP 305
L E LRI ++ L VIL ++ L+ +D
Sbjct: 162 NELCLGEIKKESKEEYLRI-IKELSKAGAKGVILGCTEIGLLIKQEDT 208
>gi|390434540|ref|ZP_10223078.1| aspartate/glutamate racemase [Pantoea agglomerans IG1]
Length = 230
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 30/174 (17%)
Query: 81 NTVGIVGGASVDST---LNLLGKLVQ--LSGEENDFPFLLCSDPLLNKELLSHDRSSFSS 135
+G++GG S +ST +L +LV+ L G L S L+ L S D
Sbjct: 2 KVIGLLGGMSWESTALYYRILNQLVKQRLGG--------LHSAELV---LYSVDFQRIEQ 50
Query: 136 LNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195
L G Q + ++ E R LE+AGA+ I++ + H ++ +P LH++
Sbjct: 51 LQAAGEWQQAGE-ILAEAARN----LERAGAQFIILCTNTMHKVAAQISAATGIPLLHIA 105
Query: 196 ECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDK 248
+ + +++A ++ +IG+LA + FY+ +LQ + G EV+ PD+
Sbjct: 106 DATGRRIQQAGVR--------KIGLLATRFTMEQDFYRGRLQQQFGLEVITPDR 151
>gi|385263632|ref|ZP_10041719.1| Asp/Glu/Hydantoin racemase [Bacillus sp. 5B6]
gi|385148128|gb|EIF12065.1| Asp/Glu/Hydantoin racemase [Bacillus sp. 5B6]
Length = 226
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 101/225 (44%), Gaps = 44/225 (19%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSG--EENDFPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + K+V ++ G + DFP ++ C P + L+H
Sbjct: 2 IGILAGMGPKSTGPFVDKVVDECQKIYGAIHDMDFPHMMIYSCPTPFYMNKPLNH----- 56
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
++ ++I V LEK G I +PC+ +HI+ +++ K SVP L+
Sbjct: 57 ---------TDMEKAII-----EGAVKLEKTGVDFIAIPCNTAHIYFNQIKKSLSVPLLN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD--KATM 251
+ + K++ + + K +LA + +G +QE L EG++ + D + +
Sbjct: 103 MVDETIKKIPKGSKKA---------ALLATVPTVQSGIFQEALNREGYDFLHQDSWQIFV 153
Query: 252 EHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
+H ++ + + ++ A L L L V+TVI+A D+
Sbjct: 154 DHI----IEKIKQGQIDEAGTLYD-ELHRELAEKVDTVIIACTDL 193
>gi|429504025|ref|YP_007185209.1| aspartate racemase [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
gi|429485615|gb|AFZ89539.1| aspartate racemase [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
Length = 226
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 101/225 (44%), Gaps = 44/225 (19%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSG--EENDFPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + K+V ++ G + DFP ++ C P + L+H
Sbjct: 2 IGILAGMGPKSTGPFVEKVVDECQKIYGAIHDMDFPHMMIYSCPTPFYMNKPLNH----- 56
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
++ ++I V LEK G I +PC+ +HI+ +++ K SVP L+
Sbjct: 57 ---------TDMEKAII-----EGAVKLEKTGVDFIAIPCNTAHIYFNQIKKSISVPLLN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD--KATM 251
+ + K++ + + K +LA + +G +QE L EG++ + D + +
Sbjct: 103 MIDETIKKIPKGSKKA---------ALLATVPTVQSGIFQEALNREGYDFLHQDSWQIYV 153
Query: 252 EHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
+H ++ + + ++ A L L L V+TVI+A D+
Sbjct: 154 DHI----IEKIKQGQIDEAGTLYD-ELHRELAEKVDTVIIACTDL 193
>gi|165937010|ref|ZP_02225575.1| aspartate racemase family protein [Yersinia pestis biovar
Orientalis str. IP275]
gi|384139400|ref|YP_005522102.1| putative aspartate/glutamate racemase [Yersinia pestis A1122]
gi|420547766|ref|ZP_15045633.1| putative aspartate/glutamate racemase [Yersinia pestis PY-01]
gi|420553094|ref|ZP_15050399.1| putative aspartate/glutamate racemase [Yersinia pestis PY-02]
gi|420558654|ref|ZP_15055261.1| putative aspartate/glutamate racemase [Yersinia pestis PY-03]
gi|420564111|ref|ZP_15060120.1| putative aspartate/glutamate racemase [Yersinia pestis PY-04]
gi|420569151|ref|ZP_15064697.1| putative aspartate/glutamate racemase [Yersinia pestis PY-05]
gi|420574807|ref|ZP_15069815.1| putative aspartate/glutamate racemase [Yersinia pestis PY-06]
gi|420580119|ref|ZP_15074640.1| putative aspartate/glutamate racemase [Yersinia pestis PY-07]
gi|420585465|ref|ZP_15079488.1| putative aspartate/glutamate racemase [Yersinia pestis PY-08]
gi|420590593|ref|ZP_15084101.1| putative aspartate/glutamate racemase [Yersinia pestis PY-09]
gi|420595984|ref|ZP_15088949.1| putative aspartate/glutamate racemase [Yersinia pestis PY-10]
gi|420601628|ref|ZP_15093975.1| putative aspartate/glutamate racemase [Yersinia pestis PY-11]
gi|420607056|ref|ZP_15098871.1| putative aspartate/glutamate racemase [Yersinia pestis PY-12]
gi|420612455|ref|ZP_15103723.1| putative aspartate/glutamate racemase [Yersinia pestis PY-13]
gi|420617828|ref|ZP_15108428.1| aspartate racemase family protein [Yersinia pestis PY-14]
gi|420623134|ref|ZP_15113183.1| putative aspartate/glutamate racemase [Yersinia pestis PY-15]
gi|420628223|ref|ZP_15117802.1| putative aspartate/glutamate racemase [Yersinia pestis PY-16]
gi|420633338|ref|ZP_15122395.1| putative aspartate/glutamate racemase [Yersinia pestis PY-19]
gi|420638540|ref|ZP_15127070.1| putative aspartate/glutamate racemase [Yersinia pestis PY-25]
gi|420644042|ref|ZP_15132076.1| putative aspartate/glutamate racemase [Yersinia pestis PY-29]
gi|420649297|ref|ZP_15136839.1| putative aspartate/glutamate racemase [Yersinia pestis PY-32]
gi|420654944|ref|ZP_15141916.1| putative aspartate/glutamate racemase [Yersinia pestis PY-34]
gi|420660424|ref|ZP_15146833.1| putative aspartate/glutamate racemase [Yersinia pestis PY-36]
gi|420665736|ref|ZP_15151596.1| putative aspartate/glutamate racemase [Yersinia pestis PY-42]
gi|420670614|ref|ZP_15156034.1| aspartate racemase family protein [Yersinia pestis PY-45]
gi|420675957|ref|ZP_15160896.1| putative aspartate/glutamate racemase [Yersinia pestis PY-46]
gi|420681566|ref|ZP_15165972.1| putative aspartate/glutamate racemase [Yersinia pestis PY-47]
gi|420686876|ref|ZP_15170702.1| putative aspartate/glutamate racemase [Yersinia pestis PY-48]
gi|420692089|ref|ZP_15175283.1| putative aspartate/glutamate racemase [Yersinia pestis PY-52]
gi|420697862|ref|ZP_15180359.1| putative aspartate/glutamate racemase [Yersinia pestis PY-53]
gi|420703603|ref|ZP_15184989.1| aspartate racemase family protein [Yersinia pestis PY-54]
gi|420709081|ref|ZP_15189754.1| putative aspartate/glutamate racemase [Yersinia pestis PY-55]
gi|420714522|ref|ZP_15194610.1| putative aspartate/glutamate racemase [Yersinia pestis PY-56]
gi|420720025|ref|ZP_15199352.1| putative aspartate/glutamate racemase [Yersinia pestis PY-58]
gi|420725511|ref|ZP_15204153.1| putative aspartate/glutamate racemase [Yersinia pestis PY-59]
gi|420731108|ref|ZP_15209169.1| putative aspartate/glutamate racemase [Yersinia pestis PY-60]
gi|420736166|ref|ZP_15213744.1| putative aspartate/glutamate racemase [Yersinia pestis PY-61]
gi|420741610|ref|ZP_15218635.1| putative aspartate/glutamate racemase [Yersinia pestis PY-63]
gi|420747263|ref|ZP_15223449.1| putative aspartate/glutamate racemase [Yersinia pestis PY-64]
gi|420752766|ref|ZP_15228321.1| putative aspartate/glutamate racemase [Yersinia pestis PY-65]
gi|420758422|ref|ZP_15232941.1| putative aspartate/glutamate racemase [Yersinia pestis PY-66]
gi|420763806|ref|ZP_15237592.1| putative aspartate/glutamate racemase [Yersinia pestis PY-71]
gi|420769025|ref|ZP_15242279.1| putative aspartate/glutamate racemase [Yersinia pestis PY-72]
gi|420774022|ref|ZP_15246793.1| putative aspartate/glutamate racemase [Yersinia pestis PY-76]
gi|420779606|ref|ZP_15251723.1| putative aspartate/glutamate racemase [Yersinia pestis PY-88]
gi|420785197|ref|ZP_15256619.1| putative aspartate/glutamate racemase [Yersinia pestis PY-89]
gi|420790388|ref|ZP_15261262.1| aspartate racemase family protein [Yersinia pestis PY-90]
gi|420795902|ref|ZP_15266221.1| putative aspartate/glutamate racemase [Yersinia pestis PY-91]
gi|420800953|ref|ZP_15270757.1| putative aspartate/glutamate racemase [Yersinia pestis PY-92]
gi|420806324|ref|ZP_15275618.1| putative aspartate/glutamate racemase [Yersinia pestis PY-93]
gi|420811668|ref|ZP_15280428.1| aspartate racemase family protein [Yersinia pestis PY-94]
gi|420817198|ref|ZP_15285412.1| putative aspartate/glutamate racemase [Yersinia pestis PY-95]
gi|420822507|ref|ZP_15290181.1| putative aspartate/glutamate racemase [Yersinia pestis PY-96]
gi|420827591|ref|ZP_15294745.1| putative aspartate/glutamate racemase [Yersinia pestis PY-98]
gi|420833294|ref|ZP_15299900.1| putative aspartate/glutamate racemase [Yersinia pestis PY-99]
gi|420838147|ref|ZP_15304289.1| putative aspartate/glutamate racemase [Yersinia pestis PY-100]
gi|420843332|ref|ZP_15308989.1| putative aspartate/glutamate racemase [Yersinia pestis PY-101]
gi|420848984|ref|ZP_15314072.1| putative aspartate/glutamate racemase [Yersinia pestis PY-102]
gi|420854569|ref|ZP_15318840.1| putative aspartate/glutamate racemase [Yersinia pestis PY-103]
gi|420859849|ref|ZP_15323454.1| putative aspartate/glutamate racemase [Yersinia pestis PY-113]
gi|421764255|ref|ZP_16201047.1| aspartate/glutamate racemase [Yersinia pestis INS]
gi|165914873|gb|EDR33485.1| aspartate racemase family protein [Yersinia pestis biovar
Orientalis str. IP275]
gi|342854529|gb|AEL73082.1| putative aspartate/glutamate racemase [Yersinia pestis A1122]
gi|391424427|gb|EIQ86798.1| putative aspartate/glutamate racemase [Yersinia pestis PY-01]
gi|391425610|gb|EIQ87854.1| putative aspartate/glutamate racemase [Yersinia pestis PY-02]
gi|391426353|gb|EIQ88541.1| putative aspartate/glutamate racemase [Yersinia pestis PY-03]
gi|391439583|gb|EIR00221.1| putative aspartate/glutamate racemase [Yersinia pestis PY-04]
gi|391440949|gb|EIR01471.1| putative aspartate/glutamate racemase [Yersinia pestis PY-05]
gi|391444538|gb|EIR04749.1| putative aspartate/glutamate racemase [Yersinia pestis PY-06]
gi|391456438|gb|EIR15463.1| putative aspartate/glutamate racemase [Yersinia pestis PY-07]
gi|391457363|gb|EIR16305.1| putative aspartate/glutamate racemase [Yersinia pestis PY-08]
gi|391459778|gb|EIR18530.1| putative aspartate/glutamate racemase [Yersinia pestis PY-09]
gi|391472533|gb|EIR29984.1| putative aspartate/glutamate racemase [Yersinia pestis PY-10]
gi|391474421|gb|EIR31717.1| putative aspartate/glutamate racemase [Yersinia pestis PY-11]
gi|391474975|gb|EIR32216.1| putative aspartate/glutamate racemase [Yersinia pestis PY-12]
gi|391488737|gb|EIR44548.1| putative aspartate/glutamate racemase [Yersinia pestis PY-13]
gi|391489935|gb|EIR45628.1| putative aspartate/glutamate racemase [Yersinia pestis PY-15]
gi|391491491|gb|EIR47046.1| aspartate racemase family protein [Yersinia pestis PY-14]
gi|391504304|gb|EIR58407.1| putative aspartate/glutamate racemase [Yersinia pestis PY-16]
gi|391504928|gb|EIR58979.1| putative aspartate/glutamate racemase [Yersinia pestis PY-19]
gi|391509772|gb|EIR63360.1| putative aspartate/glutamate racemase [Yersinia pestis PY-25]
gi|391520262|gb|EIR72825.1| putative aspartate/glutamate racemase [Yersinia pestis PY-29]
gi|391522441|gb|EIR74830.1| putative aspartate/glutamate racemase [Yersinia pestis PY-34]
gi|391523435|gb|EIR75746.1| putative aspartate/glutamate racemase [Yersinia pestis PY-32]
gi|391535339|gb|EIR86418.1| putative aspartate/glutamate racemase [Yersinia pestis PY-36]
gi|391538071|gb|EIR88904.1| putative aspartate/glutamate racemase [Yersinia pestis PY-42]
gi|391540299|gb|EIR90941.1| aspartate racemase family protein [Yersinia pestis PY-45]
gi|391553303|gb|EIS02639.1| putative aspartate/glutamate racemase [Yersinia pestis PY-46]
gi|391553838|gb|EIS03131.1| putative aspartate/glutamate racemase [Yersinia pestis PY-47]
gi|391554723|gb|EIS03941.1| putative aspartate/glutamate racemase [Yersinia pestis PY-48]
gi|391568378|gb|EIS16105.1| putative aspartate/glutamate racemase [Yersinia pestis PY-52]
gi|391569516|gb|EIS17093.1| putative aspartate/glutamate racemase [Yersinia pestis PY-53]
gi|391575137|gb|EIS21906.1| aspartate racemase family protein [Yersinia pestis PY-54]
gi|391582311|gb|EIS28079.1| putative aspartate/glutamate racemase [Yersinia pestis PY-55]
gi|391585037|gb|EIS30484.1| putative aspartate/glutamate racemase [Yersinia pestis PY-56]
gi|391595683|gb|EIS39696.1| putative aspartate/glutamate racemase [Yersinia pestis PY-58]
gi|391598311|gb|EIS42044.1| putative aspartate/glutamate racemase [Yersinia pestis PY-60]
gi|391599813|gb|EIS43395.1| putative aspartate/glutamate racemase [Yersinia pestis PY-59]
gi|391612664|gb|EIS54705.1| putative aspartate/glutamate racemase [Yersinia pestis PY-61]
gi|391613322|gb|EIS55301.1| putative aspartate/glutamate racemase [Yersinia pestis PY-63]
gi|391617199|gb|EIS58773.1| putative aspartate/glutamate racemase [Yersinia pestis PY-64]
gi|391625540|gb|EIS66018.1| putative aspartate/glutamate racemase [Yersinia pestis PY-65]
gi|391631882|gb|EIS71462.1| putative aspartate/glutamate racemase [Yersinia pestis PY-66]
gi|391636434|gb|EIS75463.1| putative aspartate/glutamate racemase [Yersinia pestis PY-71]
gi|391638695|gb|EIS77466.1| putative aspartate/glutamate racemase [Yersinia pestis PY-72]
gi|391648451|gb|EIS85961.1| putative aspartate/glutamate racemase [Yersinia pestis PY-76]
gi|391652314|gb|EIS89383.1| putative aspartate/glutamate racemase [Yersinia pestis PY-88]
gi|391656995|gb|EIS93551.1| putative aspartate/glutamate racemase [Yersinia pestis PY-89]
gi|391661407|gb|EIS97453.1| aspartate racemase family protein [Yersinia pestis PY-90]
gi|391669237|gb|EIT04383.1| putative aspartate/glutamate racemase [Yersinia pestis PY-91]
gi|391678581|gb|EIT12779.1| putative aspartate/glutamate racemase [Yersinia pestis PY-93]
gi|391679577|gb|EIT13697.1| putative aspartate/glutamate racemase [Yersinia pestis PY-92]
gi|391680410|gb|EIT14456.1| aspartate racemase family protein [Yersinia pestis PY-94]
gi|391692548|gb|EIT25377.1| putative aspartate/glutamate racemase [Yersinia pestis PY-95]
gi|391695402|gb|EIT27975.1| putative aspartate/glutamate racemase [Yersinia pestis PY-96]
gi|391697128|gb|EIT29541.1| putative aspartate/glutamate racemase [Yersinia pestis PY-98]
gi|391708529|gb|EIT39778.1| putative aspartate/glutamate racemase [Yersinia pestis PY-99]
gi|391713000|gb|EIT43822.1| putative aspartate/glutamate racemase [Yersinia pestis PY-100]
gi|391713613|gb|EIT44373.1| putative aspartate/glutamate racemase [Yersinia pestis PY-101]
gi|391725066|gb|EIT54566.1| putative aspartate/glutamate racemase [Yersinia pestis PY-102]
gi|391726789|gb|EIT56089.1| putative aspartate/glutamate racemase [Yersinia pestis PY-103]
gi|391728969|gb|EIT58007.1| putative aspartate/glutamate racemase [Yersinia pestis PY-113]
gi|411175569|gb|EKS45595.1| aspartate/glutamate racemase [Yersinia pestis INS]
Length = 230
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 103/235 (43%), Gaps = 41/235 (17%)
Query: 83 VGIVGGASVDSTL---NLLGKLV--QLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLN 137
+G++GG S +ST+ ++ + V QL G L S ++ L S D L
Sbjct: 4 LGLIGGMSWESTIPYYRMINQHVKAQLGG--------LHSAKII---LYSVDFHEIEQLQ 52
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
KG D + L + L+ AGA IV+ + H D++ C +P LH+++
Sbjct: 53 AKG-----DWQTAAQLLSNAAISLKHAGAEVIVVCTNTMHKVADDIEAACGLPLLHIADA 107
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKL-QHEGFEVVLPDKATMEHTLI 256
A ++K+ + +IG+L + GFY+ +L + G EV+ PD E
Sbjct: 108 TAVQIKQQGID--------KIGLLGTRYTMEQGFYRGRLTEKHGIEVITPDDTDRE---- 155
Query: 257 PALDALNRKDV------EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDP 305
A++ + +++ E +R+ R ++ L + V +I ++ L+ D
Sbjct: 156 -AVNRIIYEELCLGIISETSRDAYRRVIKKLEAQGVQGIIFGCTEITLLVNAQDA 209
>gi|410464673|ref|ZP_11318080.1| aspartate racemase [Desulfovibrio magneticus str. Maddingley MBC34]
gi|409982217|gb|EKO38699.1| aspartate racemase [Desulfovibrio magneticus str. Maddingley MBC34]
Length = 229
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE+AGA +++ +L H +HD V + VP LH+ + VA +KEA + +
Sbjct: 71 LERAGADGVMLCSNLIHRYHDAVAQAIGVPILHIGDAVAAAVKEAGYAA--------VAL 122
Query: 221 LAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEH 253
L ++ FY+++++ + G V+ PD+A ++
Sbjct: 123 LGARPLMEEAFYRDRIREKAGVTVLTPDQADRDY 156
>gi|298717599|ref|YP_003730241.1| aspartate/glutamate racemase [Pantoea vagans C9-1]
gi|298361788|gb|ADI78569.1| putative aspartate/glutamate racemase [Pantoea vagans C9-1]
Length = 246
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 105/243 (43%), Gaps = 39/243 (16%)
Query: 70 PFCSDALLNQANTVGIVGGASVDST---LNLLGKLV--QLSGEENDFPFLLCSDPLLNKE 124
P CS +G++GG S +ST +L + V QL G L S L+
Sbjct: 13 PECS------VKVIGLLGGMSWESTALYYRILNQQVKQQLGG--------LHSAELV--- 55
Query: 125 LLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVC 184
L S D L G Q + ++ E R LE+AGA+ IV+ + H ++
Sbjct: 56 LWSVDFQRIEQLQAAGEWQQAGE-ILAEAARN----LERAGAQFIVLCTNTMHKVAAQIS 110
Query: 185 KGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEV 243
+P LH+++ + +++A ++ ++G+LA + FY +LQ + G EV
Sbjct: 111 AATGIPLLHIADATGRRIQQAGIR--------KVGLLATRFTMEQDFYHGRLQQQFGLEV 162
Query: 244 VLPDKA--TMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLP 301
+ PD+A H +I L + +R R +Q L+ + +IL ++ L+
Sbjct: 163 MTPDEADRLFVHEVIYHELCLGEIN-PASRRRYREIMQSLVAQGAEAIILGCTEITLLVD 221
Query: 302 PDD 304
D
Sbjct: 222 ATD 224
>gi|209518824|ref|ZP_03267637.1| aspartate racemase [Burkholderia sp. H160]
gi|209500709|gb|EEA00752.1| aspartate racemase [Burkholderia sp. H160]
Length = 486
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 90/216 (41%), Gaps = 32/216 (14%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
+G+VGG ++ ++ K+V+ + +D H F KG G
Sbjct: 12 LGVVGGLGPLASADVFFKIVKATPASSD---------------AEHAEVIFEQRPFKGAG 56
Query: 143 V----QLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
+ L + N+ R EK G V+PC LSH + DE+ S+P + + E V
Sbjct: 57 AGSAATTERKLYIFNMIRD---FEKRGVTMAVLPCFLSHTFIDELTANTSLPIVDIVEAV 113
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPA 258
++ + A RIGVLA + + ++ FEVV P A T+ A
Sbjct: 114 RSHVQ----RKFPAAK--RIGVLASDYVREKRLFERYFASPEFEVVHPRTADDTDTVTKA 167
Query: 259 L---DALNRKDVEG-ARNLLRIALQVLLVRAVNTVI 290
+ D + ++ G LLR A + L+ + V+ ++
Sbjct: 168 IYGSDGIKSGNLRGRPVELLRAACESLVDQGVDVIV 203
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 79/177 (44%), Gaps = 16/177 (9%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLR-IG 219
LE GA I +PC+ +H + D + +P +++ + L+++ LR G
Sbjct: 314 LEDGGADIIAIPCNTAHAFVDRIQPYLGIPIVNMLTVTVRYLRDSF-------PGLRDFG 366
Query: 220 VLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTL--IPALDALNRKDVEGA-RNLLRI 276
VLA + + +G YQ+ L+ +G + P A + I + + G + +
Sbjct: 367 VLATSGTIGSGVYQKALESQGLHQIAPGAALQARVMDAIYGNNGVKAGFTTGQCQEDIIA 426
Query: 277 ALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-----KCIDPMDALARSTIKWVKSA 328
A++ L+ V V+L ++ LLP + + + + +DP + LAR I + K
Sbjct: 427 AVEGLIAEGVEVVLLGCTELPILLPAGEFVGRNGGRVQLVDPTEVLARQCIAYAKGG 483
>gi|431799192|ref|YP_007226096.1| aspartate racemase [Echinicola vietnamensis DSM 17526]
gi|430789957|gb|AGA80086.1| aspartate racemase [Echinicola vietnamensis DSM 17526]
Length = 267
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 71/142 (50%), Gaps = 18/142 (12%)
Query: 169 IVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILT 228
IV+ + +H++ DE+ VP +H++E AK +K+ N+ ++G+LA +
Sbjct: 102 IVLGANTAHLFADEIQAHLDVPIIHIAEATAKAIKKENLS--------KVGLLATKFTME 153
Query: 229 AGFYQEKLQHEGFEVVLP----DKATMEHTLIPALDALNRKDVEGA--RNLLRIALQVLL 282
FY++KL E ++P D T+++ L + L + V A R +R A ++L+
Sbjct: 154 MDFYKDKLLQNNIETIIPAENKDVETIQYIL---KNELGKGIVSEASKRKFIRFA-EMLV 209
Query: 283 VRAVNTVILASDDMQDLLPPDD 304
R ++L ++ L+ P D
Sbjct: 210 DRGAQGIVLGCTEIPMLIHPSD 231
>gi|228961020|ref|ZP_04122648.1| amino-acid racemase [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|423631476|ref|ZP_17607223.1| aspartate racemase [Bacillus cereus VD154]
gi|228798653|gb|EEM45638.1| amino-acid racemase [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|401263613|gb|EJR69735.1| aspartate racemase [Bacillus cereus VD154]
Length = 224
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 14/137 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE G I MPC+ +H++ +E+ + S+P L++ + + + E N K R+ +
Sbjct: 70 LESTGVSFIAMPCNTAHLYFEELQRSLSIPILNIVDETLQAIPE-NTK--------RVAL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDK-ATMEHTLIPALDALNRKDVEGARNLLRIALQ 279
LA A + AG YQ+ + E + +K TM + +I + + +VE AR L AL
Sbjct: 121 LATEATVQAGIYQDGIAKRNIEYIHYEKWQTMINQIITYIKS---GEVEKARKLWS-ALV 176
Query: 280 VLLVRAVNTVILASDDM 296
L V+T I+A D+
Sbjct: 177 GQLKDEVDTAIIACTDL 193
>gi|323529527|ref|YP_004231679.1| aspartate racemase [Burkholderia sp. CCGE1001]
gi|323386529|gb|ADX58619.1| aspartate racemase [Burkholderia sp. CCGE1001]
Length = 487
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 111/259 (42%), Gaps = 32/259 (12%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+G+VGG +T++ L K+V+ + D L+ +P + DR+ N
Sbjct: 248 LGVVGGVGPAATVDFLDKIVRNTPARRDQDHVKLLVEQNPQIP------DRTE----NLI 297
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G G SL R LE+ GA I +PC+ +H + + + VP +++
Sbjct: 298 GEGADPTVSLYATCKR-----LEEGGADIIAIPCNTAHAFVERIQPYLRVPIVNMLTETV 352
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTL--IP 257
+ + E + +IGVLA + + +G Y++ L+ +G + + P+ A + I
Sbjct: 353 RYVHE------HYPAQRKIGVLATSGTMASGVYEKALEAQGLQQIAPEPALQSRVMQAIY 406
Query: 258 ALDALNRKDVEGA-RNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-----KCI 311
+ GA + + A++ L+ V ++L ++ LLP + + I
Sbjct: 407 GKQGVKAGFTAGACHDDIAAAVEGLIDEGVEVIVLGCTELPLLLPHAEFVGSGGARVTLI 466
Query: 312 DPMDALARSTIKWVKSAEK 330
DP LAR I + +A +
Sbjct: 467 DPTHVLARRCIAYALAARE 485
>gi|358064019|ref|ZP_09150614.1| hypothetical protein HMPREF9473_02677 [Clostridium hathewayi
WAL-18680]
gi|356697805|gb|EHI59370.1| hypothetical protein HMPREF9473_02677 [Clostridium hathewayi
WAL-18680]
Length = 229
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 37/181 (20%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKEL--LSHDRSSFSSLN- 137
T+G++GG S +ST+ + + ++ KEL L R S++
Sbjct: 2 KTIGMIGGMSWESTVT----------------YYQIINEVVKKELGGLHSARILLYSVDF 45
Query: 138 -----CKGGG-VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPF 191
C+ G + ++ E R LEKAGA I++ + H ++ + +P
Sbjct: 46 AEIEQCQADGDWERSGEILAEAARS----LEKAGADFIIICTNTMHKVVPQMQRQIQIPI 101
Query: 192 LHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATM 251
LH++E A EL N++ ++ +L +T FY+EKL G EV++PD +
Sbjct: 102 LHIAEATAAELLHHNIR--------KVALLGTKYTMTQEFYKEKLTAAGIEVLIPDAQGI 153
Query: 252 E 252
E
Sbjct: 154 E 154
>gi|224367434|ref|YP_002601597.1| protein RacD1 [Desulfobacterium autotrophicum HRM2]
gi|223690150|gb|ACN13433.1| RacD1 [Desulfobacterium autotrophicum HRM2]
Length = 241
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 79/173 (45%), Gaps = 17/173 (9%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
VGI+GG ++T++L+ +++ L+ +D + C ++ ++ S + G
Sbjct: 9 VGILGGMGPEATVDLMQRIISLTPATDDLDHIRC--------IVDNNPKVPSRIKAIIEG 60
Query: 143 VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKEL 202
+ D + ++ R+ LE GA +V+ C+ +H ++ V ++P +H+ V L
Sbjct: 61 IGEDPGPCMADMGRR---LETWGADFLVIACNTAHHYYQAVQDAVNIPVIHIVGLVTDHL 117
Query: 203 KEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTL 255
+ + +IG+LA A+ G Y ++ Q +G + P + L
Sbjct: 118 IQ------KYPEHKKIGMLASPAVAMTGLYTKRFQSKGLIDIWPKPEVQQQML 164
>gi|293609488|ref|ZP_06691790.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|427425342|ref|ZP_18915438.1| aspartate racemase [Acinetobacter baumannii WC-136]
gi|292827940|gb|EFF86303.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|425697833|gb|EKU67493.1| aspartate racemase [Acinetobacter baumannii WC-136]
Length = 229
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 86/181 (47%), Gaps = 27/181 (14%)
Query: 81 NTVGIVGGASVDST---LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLN 137
T+G++GG S +ST + K+V L + ++N S D ++L
Sbjct: 2 KTIGLLGGMSWESTALYYQQINKMVH-----RKLGKLHSAKVIIN----SVDFEEIAALQ 52
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
KG Q + + E + LEKAGA CI++ + H ++ S+PFLH+++
Sbjct: 53 AKGLW-QEAGTYLAEQAQN----LEKAGADCILVCTNTMHKIAAQIEDSISIPFLHIADA 107
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA--TMEHTL 255
AKE+ N+ ++ +L + FY+ +L+ G +VV+P++A + H++
Sbjct: 108 TAKEILSQNIG--------KVALLGTAFTMEQDFYKARLRDYGIDVVIPNEADRKIVHSI 159
Query: 256 I 256
I
Sbjct: 160 I 160
>gi|375361159|ref|YP_005129198.1| aspartate racemase [Bacillus amyloliquefaciens subsp. plantarum CAU
B946]
gi|421732850|ref|ZP_16171966.1| aspartate racemase [Bacillus amyloliquefaciens subsp. plantarum
M27]
gi|451348136|ref|YP_007446767.1| aspartate racemase [Bacillus amyloliquefaciens IT-45]
gi|371567153|emb|CCF04003.1| aspartate racemase [Bacillus amyloliquefaciens subsp. plantarum CAU
B946]
gi|407073211|gb|EKE46208.1| aspartate racemase [Bacillus amyloliquefaciens subsp. plantarum
M27]
gi|449851894|gb|AGF28886.1| aspartate racemase [Bacillus amyloliquefaciens IT-45]
Length = 226
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 100/223 (44%), Gaps = 40/223 (17%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSG--EENDFPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + K+V ++ G + DFP ++ C P + L+H
Sbjct: 2 IGILAGMGPKSTGPFVDKVVDECQKIYGAIHDTDFPHMMIYSCPTPFYMNKPLNH----- 56
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
+++++I + V LEK G I +PC+ +H++ +++ K SVP L+
Sbjct: 57 ---------TDMENAII-----KGAVKLEKTGVDFIAIPCNTAHLYFNQIKKSISVPLLN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + K++ + + K +LA + +G +QE L EG++ + D +
Sbjct: 103 MIDETIKKIPKGSKKA---------ALLATVPTVQSGIFQEALNREGYDFLHQDSWQIYV 153
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
I ++ + + ++ A L L L +TVI+A D+
Sbjct: 154 DQI--IEKIKQGQIDEAGTLYD-ELHHDLAEKADTVIIACTDL 193
>gi|228997618|ref|ZP_04157228.1| Aspartate racemase [Bacillus mycoides Rock3-17]
gi|228762127|gb|EEM11063.1| Aspartate racemase [Bacillus mycoides Rock3-17]
Length = 226
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 11/102 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+E +GA CI+M + H + +EV + S+P LH+ + A+E+ E ++K RIG+
Sbjct: 69 IECSGADCILMCSNTVHQFAEEVEQAISIPLLHIGDVSAEEIVEHDVK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEHTLIPAL 259
L + FY+ +L + G E ++P ++ + H ++ L
Sbjct: 121 LGTKQTMEQDFYKTRLANYGVETIIPKEDERNFIHHVILHEL 162
>gi|292494120|ref|YP_003533263.1| aspartate racemase [Haloferax volcanii DS2]
gi|448289602|ref|ZP_21480772.1| aspartate racemase [Haloferax volcanii DS2]
gi|291369140|gb|ADE01370.1| aspartate racemase [Haloferax volcanii DS2]
gi|445582050|gb|ELY36396.1| aspartate racemase [Haloferax volcanii DS2]
Length = 245
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE GA +VM + H + S+PFLH+ V LE +GV
Sbjct: 81 LEAGGADFVVMATNTMHRVAPRIEAALSIPFLHI---VDAAADAILADGLET-----VGV 132
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDV-EGARNLLRIALQ 279
L A + FY+E+ + G +V++P+++ + + L + ++ E +R+ A+
Sbjct: 133 LGTRATMDGAFYRERFEEHGIDVIVPEESRRDEIDRIVFEELTKGEIREASRDYYLKAVD 192
Query: 280 VLLVRAVNTVILASDDMQDLLP----PDDPLL 307
L+ R + ++L +++ L+ PD PL
Sbjct: 193 QLVERGADGIVLGCTEIELLVEQADRPDVPLF 224
>gi|218513623|ref|ZP_03510463.1| probable aspartate racemase protein [Rhizobium etli 8C-3]
Length = 289
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
L+ AGA CI++ + H+ DEV SVP +H+ + AK L+ A K PL +
Sbjct: 113 LQAAGAGCILICTNTMHLIADEVAAKVSVPLIHIIDETAKSLQAAGRK-----RPL---L 164
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKA--TMEHTLI 256
LA + GFY E+++ G ++++P+ A T H +I
Sbjct: 165 LATRYTMEHGFYGERMKSLGLDIMVPEAADRTTVHDII 202
>gi|206896546|ref|YP_002247561.1| aspartate racemase [Coprothermobacter proteolyticus DSM 5265]
gi|206739163|gb|ACI18241.1| aspartate racemase [Coprothermobacter proteolyticus DSM 5265]
Length = 239
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 109/245 (44%), Gaps = 26/245 (10%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
+GI+GG ++TL+L K+++ + D L +++ DR+ + G G
Sbjct: 8 IGIIGGMGPEATLDLFRKILRNTPANKDQDHLHL---IIDNNTSIPDRTDY----ILGKG 60
Query: 143 VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKEL 202
+ I+E+ R LE AG I M C+ +HI+ ++ V F+ + + V EL
Sbjct: 61 -ENPLPFILESAR----LLESAGVNAICMACNTAHIFESDIKAHIHVDFISIVDSVLNEL 115
Query: 203 KEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDAL 262
K IG+ + ++ Y E L G++++LP E L+ + ++
Sbjct: 116 KGT------FSQAKSIGLAGTMGVFSSHLYDEPLMQRGYKLILPTNELQEE-LMKVIYSI 168
Query: 263 NRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQ---DLLPPDDPLLKKCIDPMDALAR 319
+ ++ + LQ + + +I+A ++ D L P P+ +D +ALA+
Sbjct: 169 KQGCIKEVIDKAEELLQWYKDQKADVLIMACTELPLVLDYLVPPIPV----VDSTEALAK 224
Query: 320 STIKW 324
S +++
Sbjct: 225 SVVRY 229
>gi|254302674|ref|ZP_04970032.1| aspartate racemase [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
gi|148322866|gb|EDK88116.1| aspartate racemase [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
Length = 231
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 100/228 (43%), Gaps = 26/228 (11%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGE--ENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
T+G++GG S +ST+ Q+ E +N L + +L S D K
Sbjct: 3 TMGLIGGMSWESTVTYY----QIINEVVKNKLGGLHSAKCVL----YSVDFEEIEECQKK 54
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G D E L + + LEKAGA IV+ + H + K +P LH++E A
Sbjct: 55 G-----DWDRSAEILGKVALSLEKAGADFIVICTNTMHKVVSGIKKYTKLPILHIAEMTA 109
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME--HTLIP 257
ELK+A +K +IG+L + FY++ L G EVV+P+ +E +++I
Sbjct: 110 IELKKAGIK--------KIGLLGTKYTMQQDFYKQILIDNGIEVVIPNSKDIEIVNSVIF 161
Query: 258 ALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDP 305
L + E LRI ++ L VIL ++ L+ +D
Sbjct: 162 NELCLGKIKKESKEEYLRI-IKDLSKAGAKGVILGCTEIGLLIKQEDT 208
>gi|448357073|ref|ZP_21545780.1| aspartate racemase [Natrialba chahannaoensis JCM 10990]
gi|445650246|gb|ELZ03172.1| aspartate racemase [Natrialba chahannaoensis JCM 10990]
Length = 222
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 9/145 (6%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE+ GA ++M + H ++ + S+PFLH+ + A + +++ +GV
Sbjct: 62 LERGGADFLIMATNTMHKVAPQLTEALSIPFLHIVDVAADAILTEDIQT--------VGV 113
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDV-EGARNLLRIALQ 279
L + A FY+++ G EVV PD E D L V E +R L +
Sbjct: 114 LGTKTTMEAPFYRDRFASHGIEVVTPDAEEREAVDTIIFDELTNGLVREDSRELYLSVID 173
Query: 280 VLLVRAVNTVILASDDMQDLLPPDD 304
L + ++L +++ L+ D
Sbjct: 174 TLTAKGAEGLVLGCTEIEMLVEQSD 198
>gi|228917407|ref|ZP_04080958.1| amino-acid racemase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228842249|gb|EEM87346.1| amino-acid racemase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
Length = 230
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 106/250 (42%), Gaps = 46/250 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 8 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDIEFPHMMIYSCPTPFYMDRPIDHEAMK- 66
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I MPC+ +H++ +E+ + S+P L+
Sbjct: 67 --------------KAIIEGAQK----LESTGASFIAMPCNTAHLYFEELQQSLSIPILN 108
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + K + E + R+ +LA A + +G YQ+ + E + ++ +
Sbjct: 109 IVDETLKAIPE---------TAKRVALLATEATVQSGIYQDGIAKRNIEYIHYEQ--WQE 157
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDP 313
++ + + +VE A L AL + L V+T I+A D+ + D +D
Sbjct: 158 SINKIITYIKSGEVEEAHRLWE-ALVLQLKDEVDTAIIACTDLNVVASED------FVDS 210
Query: 314 MDALARSTIK 323
LA++ ++
Sbjct: 211 AQCLAKAVVR 220
>gi|423368774|ref|ZP_17346206.1| aspartate racemase [Bacillus cereus VD142]
gi|401079714|gb|EJP88009.1| aspartate racemase [Bacillus cereus VD142]
Length = 224
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 83/174 (47%), Gaps = 22/174 (12%)
Query: 150 IVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKP 209
I+E +R LE G I MPC+ +H++ +E+ + ++P L++ + K + E N K
Sbjct: 63 IIEGAQR----LESTGVDFIAMPCNTAHLYFEELQRSITIPILNIVDETLKAIPE-NTK- 116
Query: 210 LEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEG 269
R+ +LA A + AG YQ+ + E + ++ + + + + ++E
Sbjct: 117 -------RVALLATEATVQAGIYQDGITKRNIEYIHNEQ--WQEMINQIITCIKGGEIEE 167
Query: 270 ARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIK 323
AR L + L + L V+T I+A D+ ++ D +D LA++ ++
Sbjct: 168 ARKLWSL-LVLQLKDEVDTAIIACTDLNVVVSED------FVDSAQCLAKAVVR 214
>gi|90961008|ref|YP_534924.1| aspartate racemase [Lactobacillus salivarius UCC118]
gi|301299506|ref|ZP_07205779.1| aspartate racemase [Lactobacillus salivarius ACS-116-V-Col5a]
gi|90820202|gb|ABD98841.1| Aspartate racemase [Lactobacillus salivarius UCC118]
gi|300852896|gb|EFK80507.1| aspartate racemase [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 237
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 29/218 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSH----DRSSFSSL 136
N I+GG +T + + +L + ND +L N L++H DR+++
Sbjct: 3 NFFTIIGGMGTMATESYIHQLNLRTPANNDQEYL-------NYILVNHATVPDRTAYI-- 53
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGAR--CIVMPCHLSHIWHDEVCKGCSVPFLHV 194
LD+S + F ++A + +PC+ +H ++DE+ VP LH+
Sbjct: 54 --------LDNSKPNPKIPLLEDFKQQASLKPDFFTLPCNTAHYFYDELQAAVDVPVLHM 105
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHT 254
+++K+ + + R+G++A N L G Y +++ G+E+V P T
Sbjct: 106 PRLAVEQIKQ------DYPNAKRVGIVATNGTLHDGVYDKEILDAGYELVKPTAEIQAKT 159
Query: 255 LIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILA 292
+ D + KD + + ++ + VIL
Sbjct: 160 MELIYDDIKEKDYVDGKLFYELVEDMVKDEKCDAVILG 197
>gi|229005219|ref|ZP_04162937.1| Aspartate racemase [Bacillus mycoides Rock1-4]
gi|228756030|gb|EEM05357.1| Aspartate racemase [Bacillus mycoides Rock1-4]
Length = 226
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 11/102 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+E +GA CI+M + H + +EV + S+P LH+ + A+E+ E ++K RIG+
Sbjct: 69 IECSGADCILMCSNTVHQFAEEVEQAISIPLLHIGDVSAEEIVEHDVK--------RIGL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEHTLIPAL 259
L + FY+ +L + G E ++P ++ + H ++ L
Sbjct: 121 LGTKQTMEQDFYKTRLANYGVETIIPKEDERNFIHHVILHEL 162
>gi|385872712|gb|AFI91232.1| Aspartate racemase [Pectobacterium sp. SCC3193]
Length = 236
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 85/177 (48%), Gaps = 26/177 (14%)
Query: 80 ANTVGIVGGASVDSTL---NLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSL 136
+ T+G++GG S +ST+ ++ + V+ N L + +L+ S D L
Sbjct: 3 SKTLGLIGGMSWESTIPYYRIINEYVK-----NQLGGLHSAKIILH----SVDFHEIEQL 53
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+G Q + ++ N+ V L +AGA IV+ + H D+V + +P LH+++
Sbjct: 54 QSQGDWAQA--AAVLGNIA---VGLRQAGADAIVICTNTMHKVADDVERASQLPLLHIAD 108
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATME 252
LK+ +K ++G+L + FY++++Q G +V++PD+A E
Sbjct: 109 ATGASLKQHGLK--------KVGLLGTRYTMEQDFYRQRIQERFGVDVIVPDQAGKE 157
>gi|115384100|ref|XP_001208597.1| predicted protein [Aspergillus terreus NIH2624]
gi|114196289|gb|EAU37989.1| predicted protein [Aspergillus terreus NIH2624]
Length = 237
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 104/246 (42%), Gaps = 22/246 (8%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGG 141
T+GI+GG + ST + + +L+ + + C+ +L + D +L G
Sbjct: 3 TIGIIGGIAWPSTASYYRTINELTAKRMGGSGVHCAKLVL----IQTDFDEIENLQQVG- 57
Query: 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
Q D + E L LE AGA ++ C+ H+ ++ ++P LH+ + A++
Sbjct: 58 --QWDK--LAELLGELASRLEAAGADFFLVACNTMHMVAAQIAAHTTIPMLHIVDATAQK 113
Query: 202 LKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKL-QHEGFEVVLPDKATMEHTLIPALD 260
+ EA K +G+L +T ++ +L + G +V++PD+ E +
Sbjct: 114 IVEAGHKT--------VGLLGSRYTMTGDYFSGRLSSNYGLDVLVPDEKQQEDVHSALFN 165
Query: 261 ALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD---PLLKKCIDPMDA 316
L R + R L + ++ L+ R +IL + L+ +D P+L DA
Sbjct: 166 ELARGVFRDETRMLFKGVMESLVERGAQVIILGCTEFGLLVREEDSPVPILDTGAVHADA 225
Query: 317 LARSTI 322
I
Sbjct: 226 AVEMAI 231
>gi|15674208|ref|NP_268383.1| aspartate racemase [Lactococcus lactis subsp. lactis Il1403]
gi|281492904|ref|YP_003354884.1| aspartate racemase [Lactococcus lactis subsp. lactis KF147]
gi|385831807|ref|YP_005869620.1| aspartate racemase [Lactococcus lactis subsp. lactis CV56]
gi|418038843|ref|ZP_12677159.1| Aspartate racemase [Lactococcus lactis subsp. cremoris CNCM I-1631]
gi|12725293|gb|AAK06324.1|AE006451_5 aspartate racemase [Lactococcus lactis subsp. lactis Il1403]
gi|281376556|gb|ADA66042.1| Aspartate racemase [Lactococcus lactis subsp. lactis KF147]
gi|326407815|gb|ADZ64886.1| aspartate racemase [Lactococcus lactis subsp. lactis CV56]
gi|354692850|gb|EHE92655.1| Aspartate racemase [Lactococcus lactis subsp. cremoris CNCM I-1631]
Length = 240
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 167 RCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAI 226
+ V+PC+ +H + DE+ K +P LH+ + K R+ VLA
Sbjct: 78 KFFVVPCNTAHYYFDEMQKATEIPILHMPRIAVDSISHHFPKAK------RVAVLATEGT 131
Query: 227 LTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNL 273
+ G Y++ L+ +G+E V+PD E ++ L ++V+ RNL
Sbjct: 132 ILTGVYRKALEEQGYEAVIPDDQLQE-----KVNRLIYQEVKENRNL 173
>gi|418960421|ref|ZP_13512309.1| aspartate racemase [Lactobacillus salivarius SMXD51]
gi|380345097|gb|EIA33442.1| aspartate racemase [Lactobacillus salivarius SMXD51]
Length = 237
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 29/218 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSH----DRSSFSSL 136
N I+GG +T + + +L + ND +L N L++H DR+++
Sbjct: 3 NFFTIIGGMGTMATESYIHQLNLRTPANNDQEYL-------NYILVNHATVPDRTAYI-- 53
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGAR--CIVMPCHLSHIWHDEVCKGCSVPFLHV 194
LD+S + F ++A + +PC+ +H ++DE+ VP LH+
Sbjct: 54 --------LDNSKPNPKIPLLEDFKQQASLKPDFFTLPCNTAHYFYDELQAAVDVPVLHM 105
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHT 254
+++K+ + + R+G++A N L G Y +++ G+E+V P T
Sbjct: 106 PRLAVEQIKQ------DYPNTKRVGIVATNGTLHDGVYDKEILDAGYELVKPTAEIQAKT 159
Query: 255 LIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILA 292
+ D + KD + + ++ + VIL
Sbjct: 160 MELIYDDIKEKDYVDGKLFYELVEDMVKDEKCDAVILG 197
>gi|358400681|gb|EHK50007.1| hypothetical protein TRIATDRAFT_297369 [Trichoderma atroviride IMI
206040]
Length = 230
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 19/169 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+GI+GG S ST +L L+ + L S LL + L D + L G
Sbjct: 2 KTIGILGGMSASSTQIYYQELCNLTRQRLGG---LHSPELLIRSL---DFARIEELQVSG 55
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
+ +D+ + N K LE+ GA I++ + H D++ KG S+P LH+++ A
Sbjct: 56 ---KWEDAGDILNKEAKA--LERGGADFIILATNTMHKLSDQMMKGVSIPLLHIADATAA 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
+K+ + SP G++A + FY+++L G ++P++A
Sbjct: 111 SIKDQKFQ-----SP---GLMATAFTMEQPFYKDRLIASGLSPIIPNEA 151
>gi|306992071|pdb|3OJC|A Chain A, Crystal Structure Of A Putative AspGLU RACEMASE FROM
YERSINIA PESTIS
gi|306992072|pdb|3OJC|B Chain B, Crystal Structure Of A Putative AspGLU RACEMASE FROM
YERSINIA PESTIS
gi|306992073|pdb|3OJC|C Chain C, Crystal Structure Of A Putative AspGLU RACEMASE FROM
YERSINIA PESTIS
gi|306992074|pdb|3OJC|D Chain D, Crystal Structure Of A Putative AspGLU RACEMASE FROM
YERSINIA PESTIS
Length = 231
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 99/235 (42%), Gaps = 41/235 (17%)
Query: 83 VGIVGGASVDSTLNLLGKL-----VQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLN 137
+G++GG S +ST+ + QL G L S ++ L S D L
Sbjct: 5 LGLIGGXSWESTIPYYRXINQHVKAQLGG--------LHSAKII---LYSVDFHEIEQLQ 53
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
KG D + L + L+ AGA IV+ + H D++ C +P LH+++
Sbjct: 54 AKG-----DWQTAAQLLSNAAISLKHAGAEVIVVCTNTXHKVADDIEAACGLPLLHIADA 108
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKL-QHEGFEVVLPDKATMEHTLI 256
A ++K+ + +IG+L GFY+ +L + G EV+ PD E
Sbjct: 109 TAVQIKQQGID--------KIGLLGTRYTXEQGFYRGRLTEKHGIEVITPDDTDRE---- 156
Query: 257 PALDALNRKDV------EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDP 305
A++ + +++ E +R+ R ++ L + V +I ++ L+ D
Sbjct: 157 -AVNRIIYEELCLGIISETSRDAYRRVIKKLEAQGVQGIIFGCTEITLLVNAQDA 210
>gi|430004021|emb|CCF19812.1| conserved protein of unknown function [Rhizobium sp.]
Length = 238
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 114/257 (44%), Gaps = 35/257 (13%)
Query: 81 NTVGIVGGASVDST---LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLN 137
++G++GG S +ST L+ + V+ L +D LL+ S D + +
Sbjct: 2 KSIGLIGGMSFESTAVYYRLINETVRAR-----RGGLASADILLH----SVDFAKIVEMQ 52
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
K G L ++ ++ RR LE AGA C+++ + H+ DEV +P +H+ +
Sbjct: 53 -KAGRWDLATKVLADSARR----LEAAGASCVLICTNTMHLIADEVAGAVRIPLIHIIDE 107
Query: 198 VAKELKEANM-KPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA--TMEHT 254
A L+ + +PL +LA + GFY ++++ G +V++PD T H
Sbjct: 108 TAAALRAQGLTRPL---------LLATRYTMEHGFYTDRMKTLGIDVMVPDSEDRTAMHD 158
Query: 255 LIPALDALNRKDVEG-ARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD-PLLKKCID 312
+I L V G +R+ ++ ++VIL ++ LL P PL CID
Sbjct: 159 II--FSELCAGSVRGDSRDRALAMIEKAKAAGADSVILGCTEICLLLDPKTLPL--PCID 214
Query: 313 PMDALARSTIKWVKSAE 329
A + + + S E
Sbjct: 215 STTVHAGAAVDFALSPE 231
>gi|423478909|ref|ZP_17455624.1| aspartate racemase [Bacillus cereus BAG6X1-1]
gi|402426438|gb|EJV58562.1| aspartate racemase [Bacillus cereus BAG6X1-1]
Length = 222
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 105/250 (42%), Gaps = 46/250 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P ++H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAGCQTIYGAKHDMDFPHMMIYSCPTPFYMDHPINHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE G I MPC+ +H++ +E+ + S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGVEFIAMPCNTAHLYFEELQRSISIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + + + E + R+ +LA A + AG YQ+ + E + +K +
Sbjct: 103 IVDETLQAIPE---------TAKRVALLATEATIQAGIYQDGIAKRNIEYIHHEK--WQE 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDP 313
+ + + +++ AR L AL + L V+T I+A D+ + D +D
Sbjct: 152 MINQIITYIKSGEIKEARKLWN-ALILQLEDEVDTAIIACTDLNVVASED------FVDS 204
Query: 314 MDALARSTIK 323
LA + +K
Sbjct: 205 SQCLAEAVVK 214
>gi|423400387|ref|ZP_17377560.1| aspartate racemase [Bacillus cereus BAG2X1-2]
gi|401655744|gb|EJS73273.1| aspartate racemase [Bacillus cereus BAG2X1-2]
Length = 222
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 105/250 (42%), Gaps = 46/250 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P ++H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAGCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPINHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE G I MPC+ +H++ +E+ + S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGVEFIAMPCNTAHLYFEELQRSISIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + + + E + R+ +LA A + AG YQ+ + E + +K +
Sbjct: 103 IVDETLQAIPE---------TAKRVALLATEATIQAGIYQDGIAKRNIEYIHHEK--WQE 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDP 313
+ + + +++ AR L AL + L V+T I+A D+ + D +D
Sbjct: 152 MINQIITYIKSGEIKEARKLWN-ALILQLEDEVDTAIIACTDLNVVASED------FVDS 204
Query: 314 MDALARSTIK 323
LA + +K
Sbjct: 205 SQCLAEAVVK 214
>gi|51596944|ref|YP_071135.1| aspartate/glutamate racemase [Yersinia pseudotuberculosis IP 32953]
gi|51590226|emb|CAH21863.1| putative aspartate/glutamate racemase [Yersinia pseudotuberculosis
IP 32953]
Length = 231
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 101/231 (43%), Gaps = 33/231 (14%)
Query: 83 VGIVGGASVDSTLNLLGKLVQ-LSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGG 141
+G++GG S +ST+ + Q + + D L S ++ L S D L KG
Sbjct: 5 LGLIGGMSWESTIPYYRMINQHVKAQLGD----LHSAKII---LYSVDFHEIEQLQAKG- 56
Query: 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
D + L + L+ AGA IV+ + H D++ C +P LH+++ A +
Sbjct: 57 ----DWQTAAQLLSNAAISLKHAGAEVIVVCTNTMHKVADDIEAACGLPLLHIADATAVQ 112
Query: 202 LKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKL-QHEGFEVVLPDKATMEHTLIPALD 260
+K+ + +IG+L + GFY+ +L + G EV+ PD E A++
Sbjct: 113 IKQQGID--------KIGLLGTRYTMEQGFYRGRLTEKHGIEVITPDDTDRE-----AVN 159
Query: 261 ALNRKDV------EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDP 305
+ +++ E +R+ R ++ L + V +I ++ L+ D
Sbjct: 160 RIIYEELCLGIISETSRDAYRRVIKKLEAQGVQGIIFGCTEITLLVNAQDA 210
>gi|134101592|ref|YP_001107253.1| aspartate racemase [Saccharopolyspora erythraea NRRL 2338]
gi|291009953|ref|ZP_06567926.1| aspartate racemase [Saccharopolyspora erythraea NRRL 2338]
gi|133914215|emb|CAM04328.1| aspartate racemase [Saccharopolyspora erythraea NRRL 2338]
Length = 251
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 106/245 (43%), Gaps = 29/245 (11%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG +T + KL++ + D ++ SDP + DR+
Sbjct: 23 TIGVLGGMGPAATADFYAKLIRATPATTDQEHLRVIIWSDPT------TPDRTR----AL 72
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
GG L+ RV L GA I +PC+ +H + V + VP +H+ E
Sbjct: 73 LEGGTDPTPWLVYG----ARV-LAAGGADVIAVPCNTAHAFLPAVVERVGVPLVHMIEQT 127
Query: 199 AKELKEANMKPLEAGSPLR-IGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIP 257
++ L A ++P P+R +G+LA + A Y+ L G +++PD + ++
Sbjct: 128 SRHL--AALRP-----PVRKVGLLATTGTVRARLYETWLATAGIALLVPDSTSQAEEVMA 180
Query: 258 ALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDAL 317
A+ ++ K + R LL A + L+ R +I ++ L L +DP L
Sbjct: 181 AIRSI--KAGKDDRGLLARAARRLVDRDARAIIAGCTEIPLGLETGQ-LPVPVVDPTQVL 237
Query: 318 ARSTI 322
A + I
Sbjct: 238 AEAVI 242
>gi|126739826|ref|ZP_01755517.1| aspartate racemase [Roseobacter sp. SK209-2-6]
gi|126719058|gb|EBA15769.1| aspartate racemase [Roseobacter sp. SK209-2-6]
Length = 230
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
+GI+GG ++T+ ++ +++ + +D C L + + S +L + G
Sbjct: 6 IGILGGMGPEATVLMMQRIIAGTDASDD-----CDHVPLIVDNNTQVPSRIDALVHEAGE 60
Query: 143 VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKEL 202
D +++ + R L AGA ++MPC+ +H + ++ + VPFL++ E A+++
Sbjct: 61 ---DPGVVLAEMARG---LSAAGAEALIMPCNTAHHYAPQIIEASDVPFLNMVELTARKI 114
Query: 203 KEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVV-LPDKATM 251
E S +G+LA A+ G ++ L G + V L + AT+
Sbjct: 115 AS------EVASGALVGILASPAVRKTGLFERTLAEVGLQAVYLSEDATL 158
>gi|417102980|ref|ZP_11960905.1| putative aspartate racemase protein [Rhizobium etli CNPAF512]
gi|327191448|gb|EGE58470.1| putative aspartate racemase protein [Rhizobium etli CNPAF512]
Length = 281
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 10/98 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
L+ AGA CI++ + H+ DEV SVP +H+ + AK L A K PL +
Sbjct: 113 LQAAGAGCILICTNTMHLIADEVAAKVSVPLIHIIDETAKSLHAAGRK-----RPL---L 164
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKA--TMEHTLI 256
LA + GFY E+++ G ++++P+ A T H +I
Sbjct: 165 LATRYTMEHGFYAERMKSLGLDIMVPEAADRTTVHDII 202
>gi|88704993|ref|ZP_01102705.1| aspartate racemase [Congregibacter litoralis KT71]
gi|88700688|gb|EAQ97795.1| aspartate racemase [Congregibacter litoralis KT71]
Length = 234
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 113/261 (43%), Gaps = 38/261 (14%)
Query: 77 LNQANTVGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSF 133
+N++ TVGI+GG +T++L+ +++ + +D L+ ++P + S
Sbjct: 1 MNRSKTVGILGGMGPAATVDLMQRVIAATPASDDCDHIRMLVDNNPRVP--------SRI 52
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
+L K G V L L GA + MPC+ +H ++ E+ VPFL+
Sbjct: 53 KALIEKTGPSP------VPALTAMAQQLVSQGADFLAMPCNTAHHFYPELAAAVDVPFLN 106
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD--KATM 251
+ E VA+ + + +P A R+G+LA +A+ Y+ G V P+ + T
Sbjct: 107 IMELVARHICAS--QPGTA----RVGLLASSALSQIRLYEGSFDARGMTAVYPEASQQTR 160
Query: 252 EHTLIPALDALNRKD-----VEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPL 306
LI A+ A +D + +LL A L+ A + + S +++ LP
Sbjct: 161 LMALIQAIKANRGEDCGYTAFQDCADLLASAGVDCLLIACTELSVVSRQLKNALP----- 215
Query: 307 LKKCIDPMDALARSTIKWVKS 327
D D LAR + + +
Sbjct: 216 ---VYDAADILAREVVAYAGT 233
>gi|421190809|ref|ZP_15648093.1| aspartate racemase [Oenococcus oeni AWRIB548]
gi|399973505|gb|EJO07670.1| aspartate racemase [Oenococcus oeni AWRIB548]
Length = 233
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 110/245 (44%), Gaps = 17/245 (6%)
Query: 84 GIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGV 143
GI+GG +T N + L +L+ +D FL + + N +S DR+++ K +
Sbjct: 6 GILGGMGTMATENFVRTLDRLTEAHSDQNFL--NYLVFNHACIS-DRTAYIFDRTKDNPL 62
Query: 144 QLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELK 203
S + E++++ L A +V+ C+ +H + E+ +P L++ + K
Sbjct: 63 ----SFLKEDIQQ----LNSLSADFVVITCNTAHYFLPELTAIAKMPILNMPSLAVQACK 114
Query: 204 EANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALN 263
+ AG+ L+I +LA + I+ +G YQEK+ + + ++PDK + +
Sbjct: 115 KRT-----AGT-LKISILATDGIIASGLYQEKISAQSDQAIIPDKELQIQVMKFIYQDIK 168
Query: 264 RKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIK 323
+ + A + ++L+ + + VIL + + + + ID LA + +
Sbjct: 169 QNNRIEADKYHHLVEKLLIKQKCDYVILGCTEFSVAQEREPYISDRVIDAQQVLANTAVS 228
Query: 324 WVKSA 328
K++
Sbjct: 229 MAKNS 233
>gi|380509595|ref|ZP_09853002.1| putative resistance protein [Xanthomonas sacchari NCPPB 4393]
Length = 229
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 9/142 (6%)
Query: 164 AGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAK 223
GA +V+ + H D + +P LH+++ A L+ A + +R+G+L
Sbjct: 74 GGADFLVLCTNTMHCVADAIAAAVPLPLLHIADATADALQAAGI--------VRVGLLGT 125
Query: 224 NAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNL-LRIALQVLL 282
+ FY+E+LQ GFEV++PD E + L + V+ + L R + L
Sbjct: 126 RFTMEQAFYRERLQRRGFEVLIPDAPAREDVHRIIYEELCQGVVQTSSRLRYREVIAGLQ 185
Query: 283 VRAVNTVILASDDMQDLLPPDD 304
+ VIL ++ L+ P D
Sbjct: 186 AQGAEAVILGCTEIGLLVGPAD 207
>gi|229163751|ref|ZP_04291696.1| amino-acid racemase [Bacillus cereus R309803]
gi|228619718|gb|EEK76599.1| amino-acid racemase [Bacillus cereus R309803]
Length = 224
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 98/224 (43%), Gaps = 42/224 (18%)
Query: 83 VGIVGGASVDSTL----NLLGKLVQLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST ++ K + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAKCQTVYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE G I MPC+ +H++ +E+ + S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGVEFIAMPCNTAHLYFEELQRSLSIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDK-ATME 252
+ + + + E N K R+ +LA A + AG YQ+ + E + +K TM
Sbjct: 103 IVDETLQAIPE-NTK--------RVALLATEATVQAGIYQDGIAKRNIEYIHHEKWQTMI 153
Query: 253 HTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
+ +I + + +VE AR L L + L V+T I+A D+
Sbjct: 154 NQIIIYIKS---GEVEEARKLWS-TLVLQLKDEVDTAIIACTDL 193
>gi|421189734|ref|ZP_15647048.1| aspartate racemase [Oenococcus oeni AWRIB422]
gi|399972824|gb|EJO07023.1| aspartate racemase [Oenococcus oeni AWRIB422]
Length = 233
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 109/249 (43%), Gaps = 25/249 (10%)
Query: 84 GIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSH----DRSSFSSLNCK 139
GI+GG +T N + L +L+ +D FL N + +H DR+++ K
Sbjct: 6 GILGGMGTMATENFVRTLDRLTEAHSDQNFL-------NYLVFNHACIPDRTAYIFDRTK 58
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
+ S + E++++ L A +V+ C+ +H + E+ +P L++
Sbjct: 59 DNPL----SFLKEDIQQ----LNSLSADFVVITCNTAHYFLPELTAIAKMPILNMPSLAV 110
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
+ K+ AG+ L+I +LA + I+ +G YQEK+ + + ++PDK +
Sbjct: 111 QACKKRT-----AGT-LKISILATDGIIASGLYQEKISAQSDQAIIPDKELQIQVMKFIY 164
Query: 260 DALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALAR 319
+ + + A + ++L+ + + VIL + + + + ID LA
Sbjct: 165 QDIKQNNRIEADKYHHLVEKLLIKQKCDYVILGCTEFSVAQEREPYISDRVIDAQQVLAN 224
Query: 320 STIKWVKSA 328
+ + K++
Sbjct: 225 TAVSMAKNS 233
>gi|269836715|ref|YP_003318943.1| aspartate racemase [Sphaerobacter thermophilus DSM 20745]
gi|269785978|gb|ACZ38121.1| aspartate racemase [Sphaerobacter thermophilus DSM 20745]
Length = 247
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 113/256 (44%), Gaps = 37/256 (14%)
Query: 77 LNQANTVGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLL--NKELLSHDRS 131
+ T+G++GG +T +L K+++ + D ++ +DP + E L H
Sbjct: 1 MTTKRTIGVLGGMGPLATADLYRKIIEATPARRDQDHLHVIIDADPSVPDRTEALLH--- 57
Query: 132 SFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPF 191
GG LI R LE AGA IV+PC+ +H + V ++P
Sbjct: 58 ---------GGPDPTPWLIAGAQR-----LEGAGASFIVIPCNTAHAFLGAVRDAVAIPI 103
Query: 192 LHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVL--PDKA 249
+ + + A E+ A + P A + G+LA + ++AG YQ+ L G ++ PD
Sbjct: 104 ISMIDETAAEV--AALLPRGAAA----GILATSGTVSAGLYQDALAAAGLRALVPSPDAQ 157
Query: 250 TMEHTLIPALDA--LNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLL 307
I A+ A L+R E A +A L+ + ++ A ++ +L P+D +
Sbjct: 158 AQVMAAIAAVKAGDLSRATTEKA----LVAAYELIEQGAGALLAACTELPLILQPND-IP 212
Query: 308 KKCIDPMDALARSTIK 323
IDP LAR+ ++
Sbjct: 213 VPLIDPTAVLARAAVR 228
>gi|398879859|ref|ZP_10634941.1| aspartate racemase [Pseudomonas sp. GM67]
gi|398195309|gb|EJM82358.1| aspartate racemase [Pseudomonas sp. GM67]
Length = 230
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 99/228 (43%), Gaps = 20/228 (8%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +S+ +L+ + PL + +LL + +
Sbjct: 2 RTIGLIGGMSWESSAEYY-RLINQQVRDR-------LGPLRSAKLLMYSVDFGPVEQAQH 53
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
G D +LI+ + R+ LE GA C+V+ + H ++ ++PFLH+++
Sbjct: 54 AGRWDDAALILVDAARR---LEAGGADCVVLCTNTMHKVAGQIQAAINIPFLHIAD---- 106
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALD 260
A ++AG+ L +G+L + F +E+L G V++PD + D
Sbjct: 107 ---PAGQAAVDAGA-LNVGLLGTAFTMEQDFLKERLTSMGLTVLVPDAEERQAVHRIIYD 162
Query: 261 ALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLL 307
L + E +R + R ++ L R +IL ++ L+ P+ L
Sbjct: 163 ELCVGVISEASRRIYRQVIESLSQRGAQVIILGCTEIGLLIKPEHSTL 210
>gi|228910604|ref|ZP_04074416.1| amino-acid racemase [Bacillus thuringiensis IBL 200]
gi|228849019|gb|EEM93861.1| amino-acid racemase [Bacillus thuringiensis IBL 200]
Length = 224
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 97/223 (43%), Gaps = 40/223 (17%)
Query: 83 VGIVGGASVDSTL----NLLGKLVQLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST ++ K + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAKCQTIYGAKHDMAFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE G I MPC+ +H++ +E+ S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGVEFIAMPCNTAHLYFEELQHSLSIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + + + E N+K R+ +LA A + AG YQ+ + E + ++ +
Sbjct: 103 IVDETLQTIPE-NIK--------RVTLLATEATIQAGIYQDGIAKRNIEYIHNEQ--WQE 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
++ + + ++E AR L + L V L V+T I+A D+
Sbjct: 152 SINQIITCIKGGEIEEARKLWSV-LVVQLKAEVDTAIIACTDL 193
>gi|30022823|ref|NP_834454.1| aspartate racemase [Bacillus cereus ATCC 14579]
gi|229130032|ref|ZP_04258996.1| amino-acid racemase [Bacillus cereus BDRD-Cer4]
gi|29898382|gb|AAP11655.1| Aspartate racemase [Bacillus cereus ATCC 14579]
gi|228653476|gb|EEL09350.1| amino-acid racemase [Bacillus cereus BDRD-Cer4]
Length = 224
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 92/223 (41%), Gaps = 40/223 (17%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFIDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I MPC+ +H++ +E+ S+P LH
Sbjct: 61 --------------KAIIEGAQK----LESTGASFIAMPCNTAHLYFEELQDSLSIPILH 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + + + E + R+ +LA A + A YQ+ + E + T +
Sbjct: 103 IVDETLQAIPE---------TAKRVALLATEATVQADIYQDGIAKRNIEYI--HHETWQE 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
+ + + ++E A L AL + L V+T I+A D+
Sbjct: 152 MINQIITCIKSGEIEKAHELWN-ALVLQLREEVDTAIIACTDL 193
>gi|225182088|ref|ZP_03735517.1| aspartate racemase [Dethiobacter alkaliphilus AHT 1]
gi|225167207|gb|EEG76029.1| aspartate racemase [Dethiobacter alkaliphilus AHT 1]
Length = 230
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 15/166 (9%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE AGA I++ + H + +E+ + LH++E A E+ AN+K ++G+
Sbjct: 71 LESAGADFILLCTNTMHKFAEEIQGAIDIELLHIAEATAVEVNRANIK--------KVGL 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATME--HTLIPALDALNRKDVEGARNLLRIAL 278
L + FY + LQ G +VV+P E H +I L E ++N + +
Sbjct: 123 LGTRPTMEQDFYTKTLQQNGIQVVIPSHTDREITHNVIFQELCLGIITPE-SKNEYKKII 181
Query: 279 QVLLVRAVNTVILASDDMQDLLPPDD---PLLKKC-IDPMDALARS 320
L+ + +IL ++ L+ P+D PL I M A+ ++
Sbjct: 182 NGLIKQGAEGIILGCTEIPLLIKPEDSPVPLFDTTYIHAMQAVNKA 227
>gi|227891689|ref|ZP_04009494.1| aspartate racemase [Lactobacillus salivarius ATCC 11741]
gi|417787842|ref|ZP_12435525.1| aspartate racemase [Lactobacillus salivarius NIAS840]
gi|417809397|ref|ZP_12456078.1| aspartate racemase [Lactobacillus salivarius GJ-24]
gi|227866492|gb|EEJ73913.1| aspartate racemase [Lactobacillus salivarius ATCC 11741]
gi|334308019|gb|EGL99005.1| aspartate racemase [Lactobacillus salivarius NIAS840]
gi|335350321|gb|EGM51817.1| aspartate racemase [Lactobacillus salivarius GJ-24]
Length = 237
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 29/218 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSH----DRSSFSSL 136
N I+GG +T + + +L + ND +L N L++H DR+++
Sbjct: 3 NFFTIIGGMGTMATESYIHQLNLRTPANNDQEYL-------NYILVNHATVPDRTAYI-- 53
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGAR--CIVMPCHLSHIWHDEVCKGCSVPFLHV 194
LD+S + F ++A + +PC+ +H ++DE+ VP LH+
Sbjct: 54 --------LDNSKPNPKIPLLEDFKQQASLKPDFFTLPCNTAHYFYDELQAAVDVPVLHM 105
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHT 254
+++K+ + + R+G++A N L G Y +++ G+E+V P T
Sbjct: 106 PRLAVEQIKK------DYPNAKRVGIVATNGTLHDGVYDKEILDAGYELVKPTAEIQAKT 159
Query: 255 LIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILA 292
+ D + KD + + ++ + VIL
Sbjct: 160 MELIYDDIKEKDYVDGKLFYELVEDMVKDEKCDAVILG 197
>gi|270490118|ref|ZP_06207192.1| aspartate racemase [Yersinia pestis KIM D27]
gi|270338622|gb|EFA49399.1| aspartate racemase [Yersinia pestis KIM D27]
Length = 232
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 30/176 (17%)
Query: 83 VGIVGGASVDSTL---NLLGKLV--QLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLN 137
+G++GG S +ST+ ++ + V QL G L S ++ L S D L
Sbjct: 5 LGLIGGMSWESTIPYYRMINQHVKAQLGG--------LHSAKII---LYSVDFHEIEQLQ 53
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
KG D + L + L+ AGA IV+ + H D++ C +P LH+++
Sbjct: 54 AKG-----DWQTAAQLLSNAAISLKHAGAEVIVVCTNTMHKVADDIEAACGLPLLHIADA 108
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKL-QHEGFEVVLPDKATME 252
A ++K+ + +IG+L + GFY+ +L + G EV+ PD E
Sbjct: 109 TAVQIKQQGID--------KIGLLGTRYTMEQGFYRGRLTEKHGIEVITPDDTDRE 156
>gi|423614798|ref|ZP_17590632.1| aspartate racemase [Bacillus cereus VD115]
gi|401262454|gb|EJR68596.1| aspartate racemase [Bacillus cereus VD115]
Length = 224
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 67/136 (49%), Gaps = 12/136 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE G + I MPC+ +H++ +E+ + S+P L++ + + + E + R+ +
Sbjct: 70 LESTGVKFIAMPCNTAHLYFEELQRSLSIPILNIVDETLRTIPE---------TVKRVAL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQV 280
LA A + AG YQ+ + E + +K + + + + +VE AR L AL +
Sbjct: 121 LATEATVQAGIYQDGIAKRNIEYLHNEK--WQEMINQIITCIKSGEVEEARKLWS-ALVL 177
Query: 281 LLVRAVNTVILASDDM 296
L ++T I+A D+
Sbjct: 178 QLKDEIDTAIIACTDL 193
>gi|423521363|ref|ZP_17497836.1| aspartate racemase [Bacillus cereus HuA4-10]
gi|401178569|gb|EJQ85746.1| aspartate racemase [Bacillus cereus HuA4-10]
Length = 221
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 24/182 (13%)
Query: 150 IVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKP 209
I+E ++ LE G I MPC+ +H++ +E+ S+P L++ + + + E N K
Sbjct: 63 IIEGAQK----LESTGVDFIAMPCNTAHLYFEELQCSISIPILNIVDETLQTIPE-NTK- 116
Query: 210 LEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDK-ATMEHTLIPALDALNRKDVE 268
R+ +LA A + AG YQ+ + E + +K TM + +I + + +VE
Sbjct: 117 -------RVALLATEATVQAGIYQDGIAKRNIEYIHNEKWQTMINQIITCIKS---GEVE 166
Query: 269 GARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIKWVKSA 328
AR L + L + L V+T I+A D+ + D +D LA++ +K S
Sbjct: 167 EARKLWSV-LVLQLKDEVDTAIIACTDLNVVASED------FVDSAQCLAQAIVKMYLSN 219
Query: 329 EK 330
K
Sbjct: 220 TK 221
>gi|424918999|ref|ZP_18342363.1| aspartate racemase [Rhizobium leguminosarum bv. trifolii WSM597]
gi|392855175|gb|EJB07696.1| aspartate racemase [Rhizobium leguminosarum bv. trifolii WSM597]
Length = 239
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE AGA CI++ + H+ DEV S P +H+ + AK L A K PL +
Sbjct: 71 LEAAGAGCILICTNTMHLIADEVAGKISAPLIHIIDETAKSLHAAGRK-----RPL---L 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKA--TMEHTLI 256
LA + GFY ++++ G ++++PD A T H +I
Sbjct: 123 LATRYTMEHGFYTDRMKSLGLDIMVPDAADRTTVHDII 160
>gi|354598561|ref|ZP_09016578.1| aspartate racemase [Brenneria sp. EniD312]
gi|353676496|gb|EHD22529.1| aspartate racemase [Brenneria sp. EniD312]
Length = 232
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 69/149 (46%), Gaps = 10/149 (6%)
Query: 159 VFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRI 218
V L KAGA IV+ + H D V +P LH+++ + + ++ ++
Sbjct: 69 VVLRKAGAEAIVICTNTMHKVADAVEHASQLPLLHIADATGENIYRQGIR--------KV 120
Query: 219 GVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEHTLIPALDALNRKDVE-GARNLLRI 276
G+L + FY+E+++ G EV++PD++ E + L + ++ G+R R
Sbjct: 121 GLLGTRYTMEQDFYRERIRRRYGIEVIIPDRSGRETINRIIFNELCQGKIDAGSRRKYRE 180
Query: 277 ALQVLLVRAVNTVILASDDMQDLLPPDDP 305
++ L + +IL ++ LL DD
Sbjct: 181 IIKGLEQQGAEGIILGCTEIPLLLSADDA 209
>gi|402555115|ref|YP_006596386.1| aspartate racemase [Bacillus cereus FRI-35]
gi|401796325|gb|AFQ10184.1| aspartate racemase [Bacillus cereus FRI-35]
Length = 225
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 18/163 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE G I MPC+ +H++ +E+ + S+P L++ + + + + N+K R+ +
Sbjct: 70 LESTGVDFIAMPCNTAHLYFEELQRSLSIPILNIVDETLQAIPK-NVK--------RVAL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQV 280
LA A + AG YQ+ + E + T + + + + +VE AR L + L +
Sbjct: 121 LATEATVQAGIYQDGITKRDIEYI--HHETWQEMINQIITYIKSGEVEKARELWNV-LVL 177
Query: 281 LLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIK 323
L V+T I+A D+ + D +D LA++ ++
Sbjct: 178 QLREEVDTAIIACTDLNVVASED------FVDSSQCLAKAVVR 214
>gi|262280271|ref|ZP_06058055.1| aspartate racemase [Acinetobacter calcoaceticus RUH2202]
gi|262258049|gb|EEY76783.1| aspartate racemase [Acinetobacter calcoaceticus RUH2202]
Length = 236
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/256 (17%), Positives = 108/256 (42%), Gaps = 40/256 (15%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSG---EENDFPFLLCSDPLL---NKELLSHDRSSFSSL 136
+GI+GG +T++ + K+++ + ++ P + S P + + +++HD +
Sbjct: 5 IGILGGMGPQATIDAMNKIIKNTPAHCDQEHIPVITVSIPDIPDRTQSIINHDDKPLEKM 64
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
E L+ LE A CI++PC+ +H W +++ + + + E
Sbjct: 65 --------------AEYLK----ILEAAQVGCIIIPCNTAHFWFNQLQQRTQTKMISIIE 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
++++ + + +LA +A ++ YQ + P M+H ++
Sbjct: 107 SAVHFIQDSQIA--------EVCILATSATISTQLYQSQFIQNNIRFSTPS-VEMQHKVM 157
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDD----MQDLLPPDDPLLKKCID 312
++ ++E ++ L+ + +LA + +QD + D+P L +D
Sbjct: 158 QSIYQYKAGNIEKSKQLMSEVIHFYRQNKSIKFLLACTEIPLILQDSI-QDNPEL--FVD 214
Query: 313 PMDALARSTIKWVKSA 328
D L ++ I W +++
Sbjct: 215 ATDLLIKNAIAWYQNS 230
>gi|88802581|ref|ZP_01118108.1| aspartate racemase [Polaribacter irgensii 23-P]
gi|88781439|gb|EAR12617.1| aspartate racemase [Polaribacter irgensii 23-P]
Length = 243
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 81/163 (49%), Gaps = 12/163 (7%)
Query: 144 QLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELK 203
QLD +VE L+ K LEK+ +V+ + H+ D++ + +V + + E K +
Sbjct: 68 QLDK--LVEFLKIKIQILEKSNVDYVVLASNTPHLVFDKLAESVNVKMISIVEETCKAIS 125
Query: 204 EANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALN 263
++ +K ++G+L + ++ GFYQ+ ++ G ++V+P+ + +D L
Sbjct: 126 KSGIK--------KVGLLGTKSTMSKGFYQKVGENNGIKIVIPNDENQNYIHEKYMDELV 177
Query: 264 RKDV--EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
++ E + L+RI ++ + + ++L ++ +L +D
Sbjct: 178 FNEIIPETKKELIRIINELEVNENIEGIVLGGTELPLILKQED 220
>gi|73541409|ref|YP_295929.1| aspartate racemase [Ralstonia eutropha JMP134]
gi|72118822|gb|AAZ61085.1| aspartate racemase [Ralstonia eutropha JMP134]
Length = 233
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 35/174 (20%)
Query: 83 VGIVGGASVDSTLNLLGKLVQL---SGEENDFPFL---LCSDPLLNKELLSHDRSSFSSL 136
+GI+GG +T++ + ++V+L S ++ P + L P ++ +L+ D L
Sbjct: 4 IGILGGMGPLATVDFMDRVVRLTDASCDQEHLPMVVAHLPHTPDRSRSILAGDELPLPHL 63
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV-S 195
G+ L L R +V L +V+PC+ SH W+ ++ + S P LH+ S
Sbjct: 64 L---AGIDL--------LNRNQVGL-------VVIPCNSSHHWYRQLRERSSAPILHIAS 105
Query: 196 ECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
CVA L G+ R+ VLA L + YQ+ L + V+PD+A
Sbjct: 106 TCVAA---------LPHGT-RRVAVLATRGALASRIYQDALAERDIQPVVPDEA 149
>gi|357235453|ref|ZP_09122796.1| hypothetical protein STRCR_0483 [Streptococcus criceti HS-6]
gi|356883435|gb|EHI73635.1| hypothetical protein STRCR_0483 [Streptococcus criceti HS-6]
Length = 230
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 29/172 (16%)
Query: 82 TVGIVGGASVDST---LNLLGKLV--QLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSL 136
T+G++GG S +ST L+ + + +L G L S +L L S D +
Sbjct: 3 TIGLIGGMSWESTTTYYQLINETIKKELGG--------LHSAKIL---LYSVDFAEIEHY 51
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
G D + E L + LE+AGA IV+ + H ++ + ++P LH+++
Sbjct: 52 QASG-----DWAKSAEVLSQIAQKLEQAGADFIVICTNTMHKVAPQIQEKITIPILHIAQ 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDK 248
A+ L E ++ ++G+L +T FY++KL G EV++PD+
Sbjct: 107 ATAETLLENGIQ--------KVGLLGTKYTMTQDFYKDKLLEAGLEVLIPDQ 150
>gi|421592972|ref|ZP_16037605.1| aspartate racemase, partial [Rhizobium sp. Pop5]
gi|403701221|gb|EJZ18131.1| aspartate racemase, partial [Rhizobium sp. Pop5]
Length = 166
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 19/146 (13%)
Query: 164 AGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAK 223
GA C+++ + H+ DEV K SVP +H+ + AK L + K PL +LA
Sbjct: 1 GGAGCVLICTNTMHLIADEVAKKISVPLIHIIDETAKSLNASGRK-----RPL---LLAT 52
Query: 224 NAILTAGFYQEKLQHEGFEVVLPDKA--TMEHTLIPALDALNRKDVEGARNLLRIALQVL 281
+ GFY E+++ G ++++PD A T+ H +I N N R L +
Sbjct: 53 RYTMEHGFYAERMKGLGLDIMVPDAADRTIVHDII-----FNELCAGRVHNSSREKLIAI 107
Query: 282 LVRAV----NTVILASDDMQDLLPPD 303
+ RA+ +++IL ++ +L PD
Sbjct: 108 IDRAMEKGADSIILGCTEICLILDPD 133
>gi|260495458|ref|ZP_05815584.1| aspartate racemase [Fusobacterium sp. 3_1_33]
gi|260196995|gb|EEW94516.1| aspartate racemase [Fusobacterium sp. 3_1_33]
Length = 231
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 100/228 (43%), Gaps = 26/228 (11%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGE--ENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
T+G++GG S +ST+ Q+ E +N L + +L S D C+
Sbjct: 3 TIGLIGGMSWESTVTYY----QIINEVVKNKLGGLHSAKCVL----YSVDFEEIEE--CQ 52
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G D E L + + LEKAGA IV+ + H + K +P LH++E A
Sbjct: 53 KNG---DWDRSAEILGKVALSLEKAGADFIVICTNTMHKVVSGIKKYTKLPILHIAEMTA 109
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME--HTLIP 257
ELK+A +K +IG+L + FY++ L G EVV+P+ +E +++I
Sbjct: 110 IELKKAGIK--------KIGLLGTKYTMQQDFYKQILIDNGIEVVIPNSKDIEIVNSVIF 161
Query: 258 ALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDP 305
L E LRI ++ L VIL ++ L+ +D
Sbjct: 162 NELCLGEIKKESKEEYLRI-IKELSKAGAKGVILGCTEIGLLIKQEDT 208
>gi|264679908|ref|YP_003279817.1| aspartate racemase [Comamonas testosteroni CNB-2]
gi|262210423|gb|ACY34521.1| aspartate racemase [Comamonas testosteroni CNB-2]
Length = 242
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 73/150 (48%), Gaps = 14/150 (9%)
Query: 162 EKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVL 221
+ GA C+++ + H D+V S+PFLH+++ V + A ++ L G+L
Sbjct: 83 QAGGADCVLLCTNTMHKVADQVAAAVSIPFLHIADPVGATARAAGVQVL--------GLL 134
Query: 222 AKNAILTAGFYQEKLQHE-GFEVVLP---DKATMEHTLIPALDALNRKDVEGARNLLRIA 277
+ F +E+L+ + G +V++P ++A + + L A DV +R L + A
Sbjct: 135 GTRFTMEQPFMRERLEQQFGLKVLVPGEAERAQVHRIIYEELCAGQISDV--SRKLYQRA 192
Query: 278 LQVLLVRAVNTVILASDDMQDLLPPDDPLL 307
++ L R V+L ++ L+ +D +L
Sbjct: 193 IESLAARGAQAVVLGCTEIGLLIKSEDSVL 222
>gi|260777724|ref|ZP_05886617.1| aspartate racemase [Vibrio coralliilyticus ATCC BAA-450]
gi|260605737|gb|EEX32022.1| aspartate racemase [Vibrio coralliilyticus ATCC BAA-450]
Length = 230
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGG 141
T+GI+GG S +ST + ++ Q E L + +LN S D + +L KG
Sbjct: 3 TIGIIGGMSWESTASYYKQINQRVKAEK--GGLHSAKLILN----SVDFAEIEALQHKG- 55
Query: 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
+ D + I+ L LEKAGA +++ + H +V + S+P LH+++ ++
Sbjct: 56 --EWDKTAII--LSEAAQSLEKAGADFLLIATNTMHKVASQVEEAVSIPLLHIADATGQQ 111
Query: 202 LKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPD 247
L E + ++G+L + FY+++L + G EV++P+
Sbjct: 112 LAEQGIN--------KVGLLGTAFTMEQLFYKQRLTDKFGIEVIVPN 150
>gi|423512859|ref|ZP_17489390.1| aspartate racemase [Bacillus cereus HuA2-1]
gi|423670323|ref|ZP_17645352.1| aspartate racemase [Bacillus cereus VDM034]
gi|423673469|ref|ZP_17648408.1| aspartate racemase [Bacillus cereus VDM062]
gi|401297262|gb|EJS02874.1| aspartate racemase [Bacillus cereus VDM034]
gi|401310650|gb|EJS15963.1| aspartate racemase [Bacillus cereus VDM062]
gi|402447372|gb|EJV79225.1| aspartate racemase [Bacillus cereus HuA2-1]
Length = 224
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 83/178 (46%), Gaps = 22/178 (12%)
Query: 150 IVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKP 209
I+E +R LE G I MPC+ +H++ +E+ + ++P L++ + K + E N K
Sbjct: 63 IIEGAQR----LESTGVDFIAMPCNTAHLYFEELQRSITIPILNIVDETLKAIPE-NTK- 116
Query: 210 LEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEG 269
R+ +LA A + AG YQ+ + E + ++ + + + + ++E
Sbjct: 117 -------RVALLATEATVQAGIYQDGITKRNIEYIHNEQ--WQEMINQIITCIKGGEIEE 167
Query: 270 ARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIKWVKS 327
AR L + L + L V+T I+A D+ ++ D +D LA + ++ S
Sbjct: 168 ARKLWSL-LVLQLKDEVDTAIIACTDLNVVVSED------FVDSAQCLAEAVVRIYAS 218
>gi|407473904|ref|YP_006788304.1| aspartate racemase [Clostridium acidurici 9a]
gi|407050412|gb|AFS78457.1| aspartate racemase [Clostridium acidurici 9a]
Length = 237
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 86/181 (47%), Gaps = 14/181 (7%)
Query: 144 QLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELK 203
++D+ L+ +++ LE GA I +PC+ +H + + + K VP L++ E
Sbjct: 57 KIDEELLKNSIKEGIEKLESCGADVIAVPCNSAHQYFEYITKDIKVPVLNIIE------- 109
Query: 204 EANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALN 263
L S R+ +LA +T+G YQEK++ + E V + + I L +
Sbjct: 110 ---ETTLLLESRTRVTILATEITMTSGLYQEKIKEKDCEFVFIKEWQLCINEI-ILKIKS 165
Query: 264 RKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-KCIDPMDALARSTI 322
++ + AR L + ++ + V+T+I+A D+ ++ D + K K +D LA +
Sbjct: 166 QESLSEARVLWKKLIEEIYCEDVDTIIIACTDLNVVI--DKEMTKVKFLDSSKQLASELV 223
Query: 323 K 323
K
Sbjct: 224 K 224
>gi|373498909|ref|ZP_09589406.1| aspartate racemase [Fusobacterium sp. 12_1B]
gi|371960032|gb|EHO77701.1| aspartate racemase [Fusobacterium sp. 12_1B]
Length = 230
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 29/171 (16%)
Query: 82 TVGIVGGASVDSTLN---LLGKLVQ--LSGEENDFPFLLCSDPLLNKELLSHDRSSFSSL 136
T+G++GG S +ST+ ++ + ++ L G L S L+ L S D
Sbjct: 3 TIGLIGGMSWESTVTYYEIINRTIKEKLGG--------LHSGKLV---LFSVDFQEIEEC 51
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
KG + + S + L LEKAGA IV+ + H ++ K ++P LH++E
Sbjct: 52 QAKG---EWNKSAKI--LTEAAQSLEKAGADFIVICTNTMHKIAPDIQKNINIPILHIAE 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD 247
A EL + +K ++ +L + FY+ KL G EVV+PD
Sbjct: 107 ATADELDKKEIK--------KVALLGTKYTMEQDFYKNKLIDRGIEVVIPD 149
>gi|340758182|ref|ZP_08694773.1| aspartate racemase subfamily protein [Fusobacterium varium ATCC
27725]
gi|251835097|gb|EES63640.1| aspartate racemase subfamily protein [Fusobacterium varium ATCC
27725]
Length = 235
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 77/169 (45%), Gaps = 30/169 (17%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSG---EENDFPFLLCSDPLL---NKELLSHDRSSFSS 135
VGI+GG ++T++L K+V+ + +E+ ++ ++P + ++ S ++
Sbjct: 5 VVGILGGMGPEATIDLFAKIVEETHAKCDEDHLRIIIDNNPKMPSRQDAIMKGTESPVAA 64
Query: 136 LNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195
+ ENL+ KAGA I++ + +H ++DEV +PFLH+
Sbjct: 65 MVATA-----------ENLK-------KAGADFIIIGANTAHYFYDEVASQVDIPFLHII 106
Query: 196 ECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVV 244
E KE+ + ++GV+A NA + Y + G EV+
Sbjct: 107 EEAVKEMMR------QVPGIKKVGVMATNAAVKIKLYDKCCAKFGIEVI 149
>gi|421083151|ref|ZP_15544030.1| Aspartate racemase family protein [Pectobacterium wasabiae CFBP
3304]
gi|401702377|gb|EJS92621.1| Aspartate racemase family protein [Pectobacterium wasabiae CFBP
3304]
Length = 236
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 103/231 (44%), Gaps = 27/231 (11%)
Query: 80 ANTVGIVGGASVDSTL---NLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSL 136
+ T+G++GG S +ST+ ++ + V+ N L + +L+ S D L
Sbjct: 3 SKTLGLIGGMSWESTIPYYRIINEYVK-----NQLGGLHSAKIILH----SVDFHEIEQL 53
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+G Q ++++ N+ + L +AGA IV+ + H DEV +P LH+++
Sbjct: 54 QSQGDWAQA--AIVLGNIA---IGLRQAGADAIVICTNTMHKVADEVEHASQLPLLHIAD 108
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEHTL 255
LK+ +K ++G+L + FY++++Q G +V++PD E
Sbjct: 109 ATGASLKQHGLK--------KVGLLGTRYTMEQDFYRQRIQERFGVDVIVPDTKGKELVN 160
Query: 256 IPALDALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDP 305
D L ++ + +R R +Q L + +IL ++ L+ D
Sbjct: 161 RIIYDELCLGNINDTSRQAYRDIIQQLEQQGAEGIILGCTEIPLLISAQDA 211
>gi|291568578|dbj|BAI90850.1| putative aspartate racemase [Arthrospira platensis NIES-39]
Length = 262
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 14/171 (8%)
Query: 160 FLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIG 219
LE AGA +V+ C+ SH ++D V ++P++H+ + + +K L R+G
Sbjct: 81 ILEVAGADFLVITCNTSHGFYDLVQSQLNIPWIHIMQETVRFIK------LHYPELNRVG 134
Query: 220 VLAKNAILTAGFYQEKLQHEGFEVVLP--------DKATMEHTLIPALDALNRKDVEGAR 271
+LA N L A YQ+ L G + P D + I + A + +
Sbjct: 135 ILATNGTLQAHLYQDSLTAAGLTAIAPILNSELQQDIMNAIYHPIWGIKATGVQILPPPI 194
Query: 272 NLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTI 322
N+L+ A++ L + + +I ++ +L D IDP++ LA T+
Sbjct: 195 NILKTAVKWLENQGADLLIAGCTEISVVLKLLDTSSLIAIDPLEILANLTL 245
>gi|218663207|ref|ZP_03519137.1| aspartate racemase [Rhizobium etli IE4771]
Length = 261
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 10/98 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
L+ AGA CI++ + H+ D+V SVP +H+ + AK L A K PL +
Sbjct: 93 LQAAGAGCILICTNTMHLIADKVAAKISVPLIHIIDETAKSLHAAGRK-----RPL---L 144
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKA--TMEHTLI 256
LA + GFY E+++ G ++++PD A T H +I
Sbjct: 145 LATRYTMEHGFYAERMKSLGLDIMVPDAADRTTVHDII 182
>gi|229019989|ref|ZP_04176779.1| amino-acid racemase [Bacillus cereus AH1273]
gi|229026224|ref|ZP_04182584.1| amino-acid racemase [Bacillus cereus AH1272]
gi|228735070|gb|EEL85705.1| amino-acid racemase [Bacillus cereus AH1272]
gi|228741310|gb|EEL91520.1| amino-acid racemase [Bacillus cereus AH1273]
Length = 224
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE G I MPC+ +H++ +E+ + ++P L++ + K + E N K ++ +
Sbjct: 70 LESTGVDFIAMPCNTAHLYFEELQRSITIPILNIVDETLKAIPE-NTK--------KVAL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQV 280
LA A + AG YQ+ + E + ++ + + + + ++E AR L + L +
Sbjct: 121 LATEATVQAGIYQDGITKRNIEYIHNEQ--WQEMINQIITCIKGGEIEKARKLWSV-LVL 177
Query: 281 LLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIK 323
L V+T I+A D+ +L D +D LA++ ++
Sbjct: 178 QLKDEVDTAIIACTDLNVVLSED------FVDSSQCLAKAVVR 214
>gi|398985615|ref|ZP_10691112.1| aspartate racemase [Pseudomonas sp. GM24]
gi|399014544|ref|ZP_10716834.1| aspartate racemase [Pseudomonas sp. GM16]
gi|398110810|gb|EJM00706.1| aspartate racemase [Pseudomonas sp. GM16]
gi|398153772|gb|EJM42265.1| aspartate racemase [Pseudomonas sp. GM24]
Length = 230
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 103/233 (44%), Gaps = 27/233 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +S+ +L+ + PL + +LL H F +
Sbjct: 2 RTIGLIGGMSWESSAEYY-RLINQQVRDR-------LGPLRSAQLLMHS-VDFGPVEQAQ 52
Query: 141 GGVQLDDS--LIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
+ DD+ ++V+ RR LE GA C+V+ + H +++ S+PFLH++E
Sbjct: 53 HAGRWDDAAAILVDAARR----LEAGGAECVVLCTNTMHKVAEQIQAAISIPFLHIAEPA 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPA 258
A+ + + +G+L + F +++L +G V++PD+ +
Sbjct: 109 AQAALNIDART--------VGLLGTAFTMEQDFLKQRLVAKGLTVLVPDETERKDVHRII 160
Query: 259 LDALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD---PLL 307
D L + + +R + + ++ L R +IL ++ L+ P+ PLL
Sbjct: 161 YDELCVGVISDQSRQIYQRVIESLTARGAQAIILGCTEIGMLVKPEHSALPLL 213
>gi|299769459|ref|YP_003731485.1| aspartate racemase [Acinetobacter oleivorans DR1]
gi|298699547|gb|ADI90112.1| aspartate racemase [Acinetobacter oleivorans DR1]
Length = 250
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 85/180 (47%), Gaps = 27/180 (15%)
Query: 82 TVGIVGGASVDST---LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG S +ST + K+V + P ++ + S D ++L
Sbjct: 3 TIGLLGGMSWESTALYYQQINKMVHRKLGKLHSPKVIIN---------SVDFEEIAALQA 53
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
KG Q + + E + LEKAGA CI++ + H ++ S+PFLH+++
Sbjct: 54 KGLW-QEAGAYLAEQAQN----LEKAGADCILVCTNTMHKVAAQIEDLISIPFLHIADAT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA--TMEHTLI 256
AKE+ N+ ++ +L + FY+ +LQ G VV+P++A + H++I
Sbjct: 109 AKEILSQNIG--------KVALLGTAFTMEQDFYKARLQDYGIHVVIPNEADRKIVHSII 160
>gi|407783196|ref|ZP_11130400.1| aspartate racemase [Oceanibaculum indicum P24]
gi|407202946|gb|EKE72935.1| aspartate racemase [Oceanibaculum indicum P24]
Length = 256
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 108/252 (42%), Gaps = 31/252 (12%)
Query: 83 VGIVGGASVDSTLNLLGKLVQ----LSGEENDFPFL-LCSDPLLNKELLSHDRSSFSSLN 137
VG++GG ++TL+ + KL++ L+G D L L D N ++ + +R+
Sbjct: 9 VGVLGGLGPEATLDFMAKLLERTTALTGASTDQEHLHLLVD--CNPKVPNRNRA------ 60
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
G G L R L+ AGA +VM C+ +H W ++ +PFL + +
Sbjct: 61 VAGTGPSPAPDLAAMARR-----LDAAGADLLVMACNTAHHWEADIRAATDLPFLSILDA 115
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH--TL 255
+ L+ +A +GVLA A Y+ L+ G+ V D A L
Sbjct: 116 TLEALRR------QAPEARTVGVLATEGTRAARLYETSLERAGYRPVGFDDAAQARFMEL 169
Query: 256 IPALDALNR-KDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPM 314
+ + A R D+ A +R + L + + ++ ++ +L PDD L ID
Sbjct: 170 LYRIKAGERGADIRAA---MRSLAEGLAEQGADAIVAGCTEVPLVLGPDD-LSLPFIDSS 225
Query: 315 DALARSTIKWVK 326
ALA T++ K
Sbjct: 226 LALADLTVRIAK 237
>gi|209550089|ref|YP_002282006.1| aspartate racemase [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209535845|gb|ACI55780.1| aspartate racemase [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 239
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE AGA CI++ + H+ DEV S P +H+ + AK L A K PL +
Sbjct: 71 LEAAGAGCILICTNTMHLIADEVAAKISAPLIHIIDETAKSLHAAGRK-----RPL---L 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKA--TMEHTLI 256
LA + GFY ++++ G ++++PD A T H +I
Sbjct: 123 LATRYTMEHGFYTDRMKSLGLDIMVPDAADRTSVHDII 160
>gi|398878942|ref|ZP_10634046.1| aspartate racemase [Pseudomonas sp. GM67]
gi|398197851|gb|EJM84823.1| aspartate racemase [Pseudomonas sp. GM67]
Length = 230
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE AGA C+++ H+ D V +PF+H+ + VA LK A K PL +
Sbjct: 71 LESAGADCVMICAVTMHLVADAVMAATPLPFIHIVDVVADHLKIAGHK-----KPL---L 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
+A + GFY +++ G EV++PD A
Sbjct: 123 IATRYTMENGFYPARMREHGIEVLVPDSA 151
>gi|421526773|ref|ZP_15973379.1| aspartate racemase [Fusobacterium nucleatum ChDC F128]
gi|402256881|gb|EJU07357.1| aspartate racemase [Fusobacterium nucleatum ChDC F128]
Length = 231
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 11/156 (7%)
Query: 152 ENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLE 211
E L + + LEKAGA IV+ + H + K +P LH++E A ELK+A ++
Sbjct: 62 EILGKVALSLEKAGADFIVICTNTMHKVVSGIKKYTKLPILHIAEMTAIELKKAGIR--- 118
Query: 212 AGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME--HTLIPALDALNRKDVEG 269
+IG+L + FY++ L G EVV+P+ +E +++I L + E
Sbjct: 119 -----KIGLLGTKYTMQQDFYKQILIDNGIEVVIPNSKDIEIVNSVIFNELCLGKIKKES 173
Query: 270 ARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDP 305
LRI ++ L V +IL ++ L+ +D
Sbjct: 174 KDKYLRI-IENLSKDGVEGIILGCTEIGLLVKQEDT 208
>gi|321312993|ref|YP_004205280.1| aspartate racemase [Bacillus subtilis BSn5]
gi|320019267|gb|ADV94253.1| aspartate racemase [Bacillus subtilis BSn5]
Length = 208
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 64/150 (42%), Gaps = 33/150 (22%)
Query: 103 QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRK 157
+L G ND +P ++ C P + HD + ++ G V+L
Sbjct: 7 KLYGASNDIDYPHMMIYSCPTPFYADRPIDHDEMKKAIID---GAVKL------------ 51
Query: 158 RVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLR 217
EK G I +PC+ +HI+++E+ + SVP LH+ E KE+ K +
Sbjct: 52 ----EKTGVDFIALPCNTAHIYYEEIQQALSVPMLHIVEETIKEIPHPAKKAV------- 100
Query: 218 IGVLAKNAILTAGFYQEKLQHEGFEVVLPD 247
VL + + YQ+ L+ G EV+ D
Sbjct: 101 --VLGTEPTIQSAIYQKVLKANGQEVIHKD 128
>gi|226312934|ref|YP_002772828.1| amino acid racemase [Brevibacillus brevis NBRC 100599]
gi|226095882|dbj|BAH44324.1| probable amino acid racemase [Brevibacillus brevis NBRC 100599]
Length = 228
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 37/175 (21%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + K+V ++ G ND FP ++ C P + L+H
Sbjct: 2 IGILAGMGPKSTGPFVDKVVDQCQKIYGAINDIDFPHMMIYSCPTPFYIDKPLNHTDMEM 61
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
+ I+ RR LEK I +PC+ +HI+ +++ SVP L+
Sbjct: 62 A---------------IINGARR----LEKTDVDFIAIPCNTAHIYFNQIKNSVSVPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDK 248
+ + +E+ + + K + +LA N + +G +Q+ L EG++ + D+
Sbjct: 103 MIDETIREIPKNSKK---------VALLATNPTVQSGIFQDALVREGYDFLHQDR 148
>gi|399003223|ref|ZP_10705891.1| aspartate racemase [Pseudomonas sp. GM18]
gi|398123244|gb|EJM12807.1| aspartate racemase [Pseudomonas sp. GM18]
Length = 230
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 110/247 (44%), Gaps = 25/247 (10%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +S+ +L+ + PL + +LL + F +
Sbjct: 2 RTIGLIGGMSWESSAEYY-RLINQQVRDR-------LGPLRSAKLLMYS-VDFGPVEQAQ 52
Query: 141 GGVQLDDS--LIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
+ DD+ ++V+ RR LE GA C+V+ + H ++ +PFLH+++
Sbjct: 53 HAGRWDDAAAILVDAARR----LEAGGADCVVLCTNTMHKVAGQIQAAIDIPFLHIAD-- 106
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPA 258
A L+AG+ +R+G+L + F +E+L +G V++P+ +
Sbjct: 107 -----PAGQAALDAGA-VRVGLLGTAFTMEQEFLKERLTAKGLTVLVPEAEERQAVHRII 160
Query: 259 LDALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDAL 317
D L + E +R + + ++ L R +IL ++ L+ P+ L +D +
Sbjct: 161 YDELCVGVISEASRQVYQRVIESLTERGAQAIILGCTEIGLLIKPEHSAL-PLLDTTELH 219
Query: 318 ARSTIKW 324
AR+ + +
Sbjct: 220 ARAAVAF 226
>gi|424744275|ref|ZP_18172573.1| aspartate racemase [Acinetobacter baumannii WC-141]
gi|422943014|gb|EKU38045.1| aspartate racemase [Acinetobacter baumannii WC-141]
Length = 247
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 81/175 (46%), Gaps = 33/175 (18%)
Query: 82 TVGIVGGASVDST---LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+G++GG S +ST + K++ + L + ++N S D ++L
Sbjct: 3 TIGLLGGMSWESTALYYQQINKMIH-----SKLGKLHSAKVIIN----SVDFEEIAALQA 53
Query: 139 KG----GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
KG G L + +NL EKAGA CI++ + H ++ + PFLH+
Sbjct: 54 KGLWKEAGTYLAEQ--AQNL-------EKAGADCILVCTNTMHKVAAQIEDSITTPFLHI 104
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
++ AKE+ N+ ++ +L + FY+ +LQ G +V++P++A
Sbjct: 105 ADATAKEIVSQNIG--------KVALLGTAFTMEQDFYKARLQDHGIDVIIPNEA 151
>gi|386723260|ref|YP_006189586.1| hypothetical protein B2K_14035 [Paenibacillus mucilaginosus K02]
gi|384090385|gb|AFH61821.1| hypothetical protein B2K_14035 [Paenibacillus mucilaginosus K02]
Length = 230
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
L++AGA C+++ + H E+ +PFLH++ A E++ A RIG+
Sbjct: 71 LQRAGADCLLLCTNTMHRLAAEIRGSVEIPFLHIAHAAADEIR--------AKGCGRIGL 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDV-EGARNLLRIALQ 279
L + FY+ +L+ G V++PD+ + D L R + +R ++
Sbjct: 123 LGTVYTMEGDFYRSELEERGIGVLIPDEEDRQTVNAVIYDELCRGIILPESREKFVTVIR 182
Query: 280 VLLVRAVNTVILASDDMQDLLPPDD 304
L R V+L ++ LL DD
Sbjct: 183 RLQARGAEGVVLGCTEIGLLLRQDD 207
>gi|423388935|ref|ZP_17366161.1| aspartate racemase [Bacillus cereus BAG1X1-3]
gi|401643010|gb|EJS60716.1| aspartate racemase [Bacillus cereus BAG1X1-3]
Length = 224
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE G I MPC+ +H++ +E+ + ++P L++ + K + E N K ++ +
Sbjct: 70 LESTGVDFIAMPCNTAHLYFEELQRSITIPILNIVDETLKAIPE-NTK--------KVAL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQV 280
LA A + AG YQ+ + E + ++ + + + + ++E AR L + L +
Sbjct: 121 LATEATVQAGIYQDGITKRNIEYIHNEQ--WQEMINQIITCIKGGEIEEARKLWSV-LVL 177
Query: 281 LLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIK 323
L V+T I+A D+ +L D +D LA++ ++
Sbjct: 178 QLKDEVDTAIIACTDLNVVLSED------FVDSSQCLAKAVVR 214
>gi|89896850|ref|YP_520337.1| hypothetical protein DSY4104 [Desulfitobacterium hafniense Y51]
gi|89336298|dbj|BAE85893.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 231
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 17/152 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE AGA IV+ + H DE+ G +P LH+++ A++ N++ IG+
Sbjct: 71 LEAAGAEFIVLCTNTMHKVADEIQAGLQIPLLHIADMTAQQALTNNIRT--------IGL 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEHTLIPA--LDALNRKDVEGARNLLR 275
L + FY+ +L+ +G +V+ P DKA + + L +N++ +RN +
Sbjct: 123 LGTRYTMEQDFYRSRLEAQGIKVLTPEEGDKAVVNEVIYQELCLGIINQE----SRNQFK 178
Query: 276 IALQVLLVRAVNTVILASDDMQDLLPPDDPLL 307
+ L+ + ++L ++ L+ +D ++
Sbjct: 179 RIIADLVEQGAQGIVLGCTEIGLLIKQEDSIV 210
>gi|158421727|ref|YP_001523019.1| aspartate racemase [Azorhizobium caulinodans ORS 571]
gi|158328616|dbj|BAF86101.1| aspartate racemase [Azorhizobium caulinodans ORS 571]
Length = 232
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 148 SLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANM 207
+L+V+ RR LE+ GA +++ + H EV VP LH+++ A +K A +
Sbjct: 64 ALMVDAARR----LERGGADVLLICSNTMHRMAGEVAGAVGVPLLHIADPTAARVKAAGL 119
Query: 208 KPLEAGSPLRIGVLAKNAILTAGFYQEKL-QHEGFEVVLP---DKATMEHTLIPALDALN 263
R+G+L + FY+ +L G +V++P D+A + H +I + L
Sbjct: 120 T--------RVGLLGTAFTMEQDFYKGRLAARHGLDVLVPEAEDRAVV-HRII--YEELV 168
Query: 264 RKDVEGA-RNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
+ +E A R R + L+ R VIL ++ L+ P+D
Sbjct: 169 QGRIEAASREAYRAVIARLVARGAEAVILGCTEIMLLVKPED 210
>gi|219667320|ref|YP_002457755.1| aspartate racemase [Desulfitobacterium hafniense DCB-2]
gi|219537580|gb|ACL19319.1| aspartate racemase [Desulfitobacterium hafniense DCB-2]
Length = 231
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 20/174 (11%)
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
C+ G + I+ N R LE AGA IV+ + H DE+ G +P LH+++
Sbjct: 50 TCQSSGEWGKAAEILANAARS---LEAAGAEFIVLCTNTMHKVADEIQAGLQIPLLHIAD 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEH 253
A++ +N++ IG+L + FY +L+ +G +V+ P DKA +
Sbjct: 107 MTAQQALTSNIRT--------IGLLGTRYTMEQEFYSSRLEAQGIKVLTPEEGDKAVVNE 158
Query: 254 TLIPA--LDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDP 305
+ L +N++ +RN + + L+ + ++L ++ L+ +D
Sbjct: 159 VIYQELCLGIINQE----SRNQFKRIIADLVEQGAQGIVLGCTEIGLLIKQEDS 208
>gi|386760058|ref|YP_006233275.1| amino acid racemase [Bacillus sp. JS]
gi|384933341|gb|AFI30019.1| amino acid racemase [Bacillus sp. JS]
Length = 227
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 103/252 (40%), Gaps = 46/252 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + K++ +L G ND +P ++ C P + HD
Sbjct: 2 IGILAGMGPKSTSPFIDKVIDYCQKLYGASNDIDYPHMMIYSCPTPFYADRPIDHDEMKK 61
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
+ ++ G V+L EK G I +PC+ +H++++E+ + SV L+
Sbjct: 62 AIID---GAVKL----------------EKTGVDFIALPCNTAHVYYEEIQQSLSVSLLN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ E KE+ K + VL + + YQ L+ G EVV D +H
Sbjct: 103 IVEETIKEIPHLAKKAV---------VLGTEPTIQSAIYQNGLKANGQEVVHKDH--WQH 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQ---DLLPPDDPLLKKC 310
+ + A+ + + L L + + + +I A D+ D + P+
Sbjct: 152 AVNRLIAAIKQPNHMQHTQALWQTLYEEISQHADIIISACTDLNAVLDHFQSEIPM---- 207
Query: 311 IDPMDALARSTI 322
ID LA+ST+
Sbjct: 208 IDSSACLAKSTV 219
>gi|47565179|ref|ZP_00236222.1| aspartate racemase, putative [Bacillus cereus G9241]
gi|47557965|gb|EAL16290.1| aspartate racemase, putative [Bacillus cereus G9241]
Length = 224
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 101/250 (40%), Gaps = 46/250 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLV------QLSGEENDFPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + + DFP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAGCQTIYRAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE G I MPC+ +H++ +E+ + SVP L+
Sbjct: 61 --------------KAIIEGAQK----LESTGVEFIAMPCNTAHLYFEELQRSLSVPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + + + E N K R+ +LA A + AG YQ+ + E + T +
Sbjct: 103 IVDETLQAIPE-NTK--------RVALLATEATVQAGIYQDGIAKRNIEYI--HHETWQE 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDP 313
+ + + ++E A L L + L V+T I+A D+ + D +D
Sbjct: 152 MINQIITCIKSGEIEKAHELWN-TLVLQLRDEVDTAIIACTDLNVVASED------FVDS 204
Query: 314 MDALARSTIK 323
LA++ +K
Sbjct: 205 AQCLAKAVVK 214
>gi|355628628|ref|ZP_09049889.1| hypothetical protein HMPREF1020_03968 [Clostridium sp. 7_3_54FAA]
gi|354819699|gb|EHF04138.1| hypothetical protein HMPREF1020_03968 [Clostridium sp. 7_3_54FAA]
Length = 230
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 82/172 (47%), Gaps = 19/172 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +ST+ + + G+E L S +L L S D F +
Sbjct: 2 KTIGMIGGMSWESTVLYYQIINETVGKELGG---LHSAKIL---LYSVD---FDEIEKYQ 52
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
G + + + E L V LEKAGA +V+ + H ++ +P +H++E A
Sbjct: 53 AGGEWEKA--GEVLSEAAVNLEKAGADYLVICTNTMHKVVPQIQTHIQIPIIHIAEATAD 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
LKE+ ++ ++ +L +T FY++KL G EV++P++ +E
Sbjct: 111 MLKESRIR--------KVALLGTKYTMTQDFYKKKLTDAGIEVLIPEQPDIE 154
>gi|421488088|ref|ZP_15935483.1| aspartate racemase [Streptococcus oralis SK304]
gi|400369249|gb|EJP22251.1| aspartate racemase [Streptococcus oralis SK304]
Length = 230
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE+AGA IV+ + H +V + ++P LH+++ A+ L ++ ++G+
Sbjct: 71 LEQAGADFIVICTNTMHKVASQVQELITIPILHIAQATAQSLLADGIQ--------KVGL 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
L +T FY+EKL G EV++PD+A
Sbjct: 123 LGTKYTMTQDFYKEKLIESGLEVLIPDQA 151
>gi|270291607|ref|ZP_06197827.1| aspartate racemase [Pediococcus acidilactici 7_4]
gi|418068867|ref|ZP_12706148.1| aspartate racemase [Pediococcus acidilactici MA18/5M]
gi|427442246|ref|ZP_18925587.1| aspartate racemase [Pediococcus lolii NGRI 0510Q]
gi|270279926|gb|EFA25764.1| aspartate racemase [Pediococcus acidilactici 7_4]
gi|357538525|gb|EHJ22546.1| aspartate racemase [Pediococcus acidilactici MA18/5M]
gi|425786787|dbj|GAC46375.1| aspartate racemase [Pediococcus lolii NGRI 0510Q]
Length = 235
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 169 IVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILT 228
V+ C+ +H ++D++ K +P +H+ K++K+ E + RIG++ T
Sbjct: 80 FVIACNTAHYFYDDLQKATEIPIVHMPRETVKQIKK------EFPAAKRIGIIGTPGTTT 133
Query: 229 AGFYQEKLQHEGFEVVLPDKATMEHT---LIPALDALNRKDVEGARNLLRIALQVLLVRA 285
G Y +L EG+EVV P + T + + A N+ D + +LR+ + R
Sbjct: 134 DGIYDRELIAEGYEVVKPTPEIQDLTSKLIFEDIKAQNKVDAQLFYQILRLMTE---ERG 190
Query: 286 VNTVILA 292
VIL
Sbjct: 191 AQVVILG 197
>gi|423650650|ref|ZP_17626220.1| aspartate racemase [Bacillus cereus VD169]
gi|401281321|gb|EJR87233.1| aspartate racemase [Bacillus cereus VD169]
Length = 224
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE GA I MPC+ +H++ +E+ S+P LH+ + + + E + R+ +
Sbjct: 70 LESTGASFIAMPCNTAHLYFEELQDSLSIPILHIVDETLQAIPE---------TAKRVAL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQV 280
LA A + A YQ+ + E + T + + + + ++E A L AL +
Sbjct: 121 LATEATVQADIYQDGIAKRNIEYI--HHETWQEMINQIITCIKSGEIEKAHELWN-ALVL 177
Query: 281 LLVRAVNTVILASDDM 296
L V+T I+A D+
Sbjct: 178 QLREEVDTAIIACTDL 193
>gi|239904859|ref|YP_002951597.1| Asp/Glu racemase family protein [Desulfovibrio magneticus RS-1]
gi|239794722|dbj|BAH73711.1| Asp/Glu racemase family protein [Desulfovibrio magneticus RS-1]
Length = 229
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 32/180 (17%)
Query: 81 NTVGIVGGASVDSTLNLLGKL-----VQLSGEENDFPFLLCSD-PLLNKELLSHDRSSFS 134
T+G++GG S ST+ L V+L G + L D L + + + DRS
Sbjct: 2 KTLGLLGGTSWTSTVEYYRFLNEEVAVRLGGLHSARLVLASIDFAELEQAMRADDRSGAE 61
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
++ G QL E+AGA +++ +L H +HD V + VP LH+
Sbjct: 62 AI-LAGAARQL----------------ERAGADGVMLCSNLIHRYHDAVAQAIGVPILHI 104
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVL-PDKATMEH 253
+ VA +K A + +L ++ FY+++++ +G VL PD+ E+
Sbjct: 105 GDAVAAAVKNAGYAA--------VALLGARPLMEEAFYRDRIREKGGVTVLTPDQPDREY 156
>gi|424882375|ref|ZP_18306007.1| aspartate racemase [Rhizobium leguminosarum bv. trifolii WU95]
gi|392518738|gb|EIW43470.1| aspartate racemase [Rhizobium leguminosarum bv. trifolii WU95]
Length = 239
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 74/146 (50%), Gaps = 13/146 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
L+ AGA CI++ + H+ D+V + SVP +H+ + AK L A K PL +
Sbjct: 71 LQIAGAGCILICTNTMHLIADKVAEKISVPLIHIIDETAKSLHAAGRK-----RPL---L 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEHTLIPALDALNRKDVEGARNLLRIA 277
LA + GFY ++++ G ++++P D+ T+ + L A K ++ +R+ L
Sbjct: 123 LATRYTMEHGFYSDRMKSLGVDIMVPNANDRTTVHDIIFNELCA--GKVLDSSRDKLMAV 180
Query: 278 LQVLLVRAVNTVILASDDMQDLLPPD 303
+ + +++IL ++ +L PD
Sbjct: 181 ISRAVENGADSIILGCTEICLILDPD 206
>gi|153864530|ref|ZP_01997405.1| aspartate racemase [Beggiatoa sp. SS]
gi|152145974|gb|EDN72594.1| aspartate racemase [Beggiatoa sp. SS]
Length = 216
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 160 FLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIG 219
FLE AG IV+PC+ +H +H++V +P++H+ +C + L + N + + ++G
Sbjct: 80 FLESAGVDFIVVPCNTAHAFHEQVQSQLQIPWIHLIDCTTQFLVD-NYQDTK-----KVG 133
Query: 220 VLAKNAILTAGFYQEKLQHEGF 241
+LA + L + Y L + GF
Sbjct: 134 ILATDGTLQSQLYHNSLLNAGF 155
>gi|91782822|ref|YP_558028.1| aspartate racemase [Burkholderia xenovorans LB400]
gi|91686776|gb|ABE29976.1| Aspartate racemase [Burkholderia xenovorans LB400]
Length = 518
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 112/254 (44%), Gaps = 34/254 (13%)
Query: 83 VGIVGGASVDSTLNLLGKLVQ---LSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
VG++GG +T++ + KLV+ + +++ ++ +P + DR++
Sbjct: 243 VGVLGGVGPAATVDFMAKLVRNTPAACDQDHIKVMVEQNPQIP------DRTA----ALL 292
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G G D +L + R LE GA I +PC+ +H + + + +P +++ C A
Sbjct: 293 GSGE--DPTLALYAACRT---LEDGGADLIAIPCNTAHAFVERIQPSLGIPIVNMLTCTA 347
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD---KATMEHTLI 256
L+E E IGVLA L + Y++ L+ GF ++P +A + H +
Sbjct: 348 DYLRETFPGLRE------IGVLATTGTLASRVYEQSLEARGFVQIVPGEQAQARLMHAVY 401
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPL------LKKC 310
A R+ L A+ L+ + V ++L ++ LL D L + +
Sbjct: 402 GPKGAKAGFTSGECRDDLAAAVDDLIAQGVQVIVLGCTEL-PLLLRDAALACAAGRVVRL 460
Query: 311 IDPMDALARSTIKW 324
+DP + LA+ + +
Sbjct: 461 VDPTEVLAKRCVAY 474
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 26/173 (15%)
Query: 77 LNQANTVGIVGGASVDSTLNLLGKLV---QLSGEENDFPFLLCSDPLLNKELLSHDRSSF 133
+N+ ++G+V GA+ ++ ++L ++ Q G F LL +R S+
Sbjct: 1 MNRYRSLGVVTGAAQVASADVLCRMSAAWQRRGAARPFDLLL-------------ERHSW 47
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
+ ++D + R F EK G IV+PC LSH + DE+ +VP +
Sbjct: 48 QGPASQR---EVDAQFKIHVFDTMRAF-EKRGVEAIVLPCFLSHTFIDELSANVAVPVAN 103
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
+ ++ ++ A S R+GVL +AI G ++ F+V+ P
Sbjct: 104 IMTALSAHVRRAFP------SVRRVGVLTSDAIRDNGLFERYFDAARFDVLHP 150
>gi|345022591|ref|ZP_08786204.1| aspartate racemase [Ornithinibacillus scapharcae TW25]
Length = 247
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 72/174 (41%), Gaps = 8/174 (4%)
Query: 151 VENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPL 210
+E +++ E AG I +PC+ SH + DE+ ++ +++ E A ++
Sbjct: 63 LEAVKKDFELFEVAGVDNIAIPCNTSHYYFDEMQAMTNIKIINMIEETANYIRS------ 116
Query: 211 EAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGA 270
G ++G+LA + + G YQ++L + +PD + + D K +
Sbjct: 117 NYGPDAKVGILATDGTINTGIYQDELHKYNMKAHIPDVHGQKQVMQTIYDFKADKPI-NI 175
Query: 271 RNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIKW 324
RI +L + VIL ++ + LL C+D M L I +
Sbjct: 176 PEFERIIQNMLATEDCDCVILGCTELS-CIEIGANLLPYCVDAMQVLVNRAITY 228
>gi|418936429|ref|ZP_13490147.1| aspartate racemase [Rhizobium sp. PDO1-076]
gi|375056857|gb|EHS53063.1| aspartate racemase [Rhizobium sp. PDO1-076]
Length = 237
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 13/147 (8%)
Query: 159 VFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRI 218
V LEKAGA C+++ + H+ EV +VP +++ + A LK+ K PL
Sbjct: 69 VGLEKAGASCVLICTNTMHLVAGEVQARINVPLINIIDETATALKKNGAK-----RPL-- 121
Query: 219 GVLAKNAILTAGFYQEKLQHEGFEVVLPDKA--TMEHTLIPALDAL-NRKDVEGARNLLR 275
+LA + GFY E+++ G E+++PD T H +I D L + ++ +R L
Sbjct: 122 -LLATRYTMEHGFYAERMRRNGVEIMVPDAGGRTATHNII--FDELCAGRVIDSSREKLM 178
Query: 276 IALQVLLVRAVNTVILASDDMQDLLPP 302
++ ++VIL ++ +L P
Sbjct: 179 AIIEQAKAEGADSVILGCTEICLILDP 205
>gi|71083965|ref|YP_266685.1| aspartate racemase [Candidatus Pelagibacter ubique HTCC1062]
gi|71063078|gb|AAZ22081.1| Aspartate racemase [Candidatus Pelagibacter ubique HTCC1062]
Length = 248
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 102/230 (44%), Gaps = 35/230 (15%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND--FPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
+GI+GG + L+ KL L+ ++D +P + L NK + S
Sbjct: 2 IGILGGMGTQAGLDFCNKLAMLNRGKSDQEYPLFM----LYNKSNIPGRPESI------- 50
Query: 141 GGVQLDD-SLIVENLRRKRVF-------------LEKAGARCIVMPCHLSHIWHDEVCKG 186
GVQ S I N + + + LEK+G + IV+PC+ +H W++++ K
Sbjct: 51 -GVQTKSLSTIPRNSKNTKKYNRVLKSLLDGCKSLEKSGCKFIVIPCNTAHYWYEDLRKK 109
Query: 187 CSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
+P +++ + V + K++ K +IG+LA L Y +K+ + + ++ P
Sbjct: 110 IKIPIINMPKEVFIQTKKSCKK------NSKIGLLATEGTLKTEIY-DKIFKKDYVLIKP 162
Query: 247 DKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
++ + + +++ A ++ A++ L+ + +IL ++
Sbjct: 163 LSNLQTSSVNKTIKHVKMGNIKLAEKTIKPAIKYLIKQKCKKIILGCTEI 212
>gi|365850875|ref|ZP_09391329.1| aspartate racemase [Lactobacillus parafarraginis F0439]
gi|363718124|gb|EHM01479.1| aspartate racemase [Lactobacillus parafarraginis F0439]
Length = 239
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 169 IVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILT 228
V+PC+ +H D++ +P LH+ K++ P + R+G++A L
Sbjct: 80 FVIPCNTAHYRFDDLQSMTDIPILHMPRETVKDI------PNYVPNAKRVGLIATKGTLH 133
Query: 229 AGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKD 266
G Y +++++ G+E+V PD+ T + T+ D + K+
Sbjct: 134 DGIYDQEIKNAGYELVKPDEKTADQTMELIYDDIKEKN 171
>gi|218507901|ref|ZP_03505779.1| probable aspartate racemase protein [Rhizobium etli Brasil 5]
Length = 261
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 22/162 (13%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
L+ AGA CI++ + H+ DEV SVP +H+ + AK L A K PL +
Sbjct: 103 LQAAGAGCILICTNTMHLIADEVAAKVSVPLIHIIDETAKSLHAAGRK-----RPL---L 154
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKA--TMEHTLIPALDALNRKDVEGARNLLRIAL 278
LA + GFY E+++ G ++++P+ A T H +I N + R L
Sbjct: 155 LATRYTMEHGFYAERMKSLGLDIMVPEAADRTTVHDII-----FNELCAGRVHDRSREKL 209
Query: 279 QVLLVRAV----NTVILASDDMQDLLPPDD---PLLKKCIDP 313
++ RAV +++IL ++ +L PD P L+ DP
Sbjct: 210 IDIIDRAVENGADSIILGCTEICLILDPDRLPLPGLRHHHDP 251
>gi|152977116|ref|YP_001376633.1| aspartate racemase [Bacillus cytotoxicus NVH 391-98]
gi|152025868|gb|ABS23638.1| aspartate racemase [Bacillus cytotoxicus NVH 391-98]
Length = 238
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 92/223 (41%), Gaps = 40/223 (17%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V Q+ G +ND FP ++ C P + + H+
Sbjct: 10 IGILAGMGPKSTGPFIDTVVEQCQQIYGAKNDIDFPHMMIYSCPTPFYIDKPIDHEAMK- 68
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
IV +R LE G I MPC+ +H++ +E+ ++P L+
Sbjct: 69 --------------QAIVTGAQR----LENIGVDFIAMPCNTAHLYFNEIQNAVALPLLN 110
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + KEL K + +LA NA + + YQ ++ G E + K + +
Sbjct: 111 IIDETLKELPNHIHK---------VTLLATNATVQSRIYQNEITKLGIEYI--HKESWQK 159
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
I + ++ + + A L L + L V+ I+A D+
Sbjct: 160 DTIQIISSIKKGHLHKANELWN-TLSIELAETVDAAIIACTDL 201
>gi|392550041|ref|ZP_10297178.1| aspartate racemase [Pseudoalteromonas spongiae UST010723-006]
Length = 231
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 108/248 (43%), Gaps = 26/248 (10%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGG 141
T+G++GG S +STLN + Q G + L ++ LL H L G
Sbjct: 3 TIGLLGGMSWESTLNYYKAINQ--GVKAALGGLNSAEILLYSVNFDH----IEKLQRAGE 56
Query: 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
++ D L + LE AGA C+++ + H ++ + S+P LH+++ A +
Sbjct: 57 WQKMGDML-----AKSAQDLEAAGAHCLLICTNTMHKVAHQIEENISIPLLHIADATAAQ 111
Query: 202 LKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATME--HTLIPA 258
L + ++ R+G+L + GFY+ +L G +V++P++ + H++I
Sbjct: 112 LIQDDIS--------RVGLLGTAFTMEQGFYKNRLTERFGIDVIVPNQEDRDCVHSVIYN 163
Query: 259 LDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD---PLLKKCIDPMD 315
L ++E L I + L + +IL ++ L+ +D PL D
Sbjct: 164 ELCLGEINLESKERYLAI-INKLHRQGAQAIILGCTEIALLVSQNDTEIPLYDTTGIHAD 222
Query: 316 ALARSTIK 323
A + +K
Sbjct: 223 AAVKFALK 230
>gi|326387882|ref|ZP_08209488.1| aspartate racemase [Novosphingobium nitrogenifigens DSM 19370]
gi|326207928|gb|EGD58739.1| aspartate racemase [Novosphingobium nitrogenifigens DSM 19370]
Length = 230
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 33/232 (14%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQ----LSGEENDFPFLLCSDPLLNKELLSHDRSSFSSL 136
T+G++GG S +S+ + Q G + LL S E L H
Sbjct: 2 KTLGLIGGMSWESSAEYYRIINQGVRDALGPTHSARLLLWSFDFAEIEALQH-------- 53
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
C + S +V+ RR LE AGA +++ + H D + +VP LH+++
Sbjct: 54 ACDWDALA---SRMVDAARR----LETAGAEALLICTNTMHRCADLIAANVAVPLLHIAD 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKL-QHEGFEVVLPDKATME--H 253
++ A ++ R+G+L + FY+E+L + G +V++P+ A + H
Sbjct: 107 PTGAAVRAAGIE--------RVGLLGTRFTMEQAFYRERLAERHGLDVIVPEDADRQIVH 158
Query: 254 TLIPALDALNRKDVE-GARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
+I + L +E +R R AL L R +IL ++ L+ P+D
Sbjct: 159 RVI--YEELVAGRIEPRSREAYRGALARLAERGAQGIILGCTEIMLLVRPED 208
>gi|385839832|ref|YP_005863156.1| Aspartate racemase [Lactobacillus salivarius CECT 5713]
gi|300213953|gb|ADJ78369.1| Aspartate racemase [Lactobacillus salivarius CECT 5713]
Length = 224
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
Query: 169 IVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILT 228
+PC+ +H ++DE+ VP LH+ +++K+ + + R+G++A N L
Sbjct: 67 FTLPCNTAHYFYDELQAAVDVPVLHMPRLAVEQIKK------DYPNAKRVGIVATNGTLH 120
Query: 229 AGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKD-VEG 269
G Y +++ G+E+V P T+ D + KD V+G
Sbjct: 121 DGVYDKEILDAGYELVKPTAEIQAKTMELIYDDIKEKDYVDG 162
>gi|85703003|ref|ZP_01034107.1| aspartate racemase [Roseovarius sp. 217]
gi|85671931|gb|EAQ26788.1| aspartate racemase [Roseovarius sp. 217]
Length = 233
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 80/185 (43%), Gaps = 27/185 (14%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLN 137
TVGI+GG ++T+ L+ KL+ +D P ++ +P + S +
Sbjct: 2 KTVGILGGMGPEATILLMQKLLAAVPARDDSDHIPLIVHQNPQVP-----------SRIK 50
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
G D + + R LE AGA+ + MPC+ +H + V S+PFL++ +
Sbjct: 51 ALIEGTGEDPGPTLARMARD---LEAAGAQALAMPCNTAHHYAPAVVAATSLPFLNMLDL 107
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFE-VVLPDKATMEHTLI 256
A L + RIG+LA A AG + G V LPD + + TLI
Sbjct: 108 TAAALAAQGAR--------RIGMLASPATRLAGVFAAPFAAHGLTPVFLPDDSDLL-TLI 158
Query: 257 PALDA 261
A+ A
Sbjct: 159 RAVKA 163
>gi|229099232|ref|ZP_04230164.1| amino-acid racemase [Bacillus cereus Rock3-29]
gi|229118246|ref|ZP_04247603.1| amino-acid racemase [Bacillus cereus Rock1-3]
gi|228665218|gb|EEL20703.1| amino-acid racemase [Bacillus cereus Rock1-3]
gi|228684213|gb|EEL38159.1| amino-acid racemase [Bacillus cereus Rock3-29]
Length = 235
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 95/223 (42%), Gaps = 40/223 (17%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 13 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDIDFPHMMIYSCPTPFYMDRPIDHEAMK- 71
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE AG I MPC+ +H++ +E+ S+P L+
Sbjct: 72 --------------KAIIEGAQK----LESAGVDFIAMPCNTAHLYFEELQHSLSIPILN 113
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + + + E + R+ +LA A + AG YQ+ + E + +K +
Sbjct: 114 IVDETLRAIPE---------TVKRVALLATEATVQAGIYQDGIAKRNIEYLHNEK--WQE 162
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
+ + + +VE AR L AL + L ++T I+A D+
Sbjct: 163 MINQIITCIKSGEVEEARKLWS-ALVLQLKDEIDTAIIACTDL 204
>gi|86358367|ref|YP_470259.1| aspartate racemase [Rhizobium etli CFN 42]
gi|86282469|gb|ABC91532.1| probable aspartate racemase protein [Rhizobium etli CFN 42]
Length = 239
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 84/181 (46%), Gaps = 27/181 (14%)
Query: 81 NTVGIVGGASVDST---LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLN 137
T+G++GG S +S+ L+ ++V+ L + EL+ H + +
Sbjct: 2 ETIGLIGGMSFESSAVYYRLINEMVRAR-----------KGGLASAELILHSVNFEEIVA 50
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
+ G D + + ++ + L+ GA C+++ + H+ ++V SVP +H+ +
Sbjct: 51 LQKAGDWADAARRLGDVAER---LQAGGAGCVLICTNTMHLIAEQVAARISVPLIHIIDE 107
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA--TMEHTL 255
AK L A K PL +LA + GFY E+++ G ++++PD A T H +
Sbjct: 108 TAKSLHAAGRK-----RPL---LLATRYTMEHGFYAERMKGLGLDIIVPDAADRTTVHDI 159
Query: 256 I 256
I
Sbjct: 160 I 160
>gi|423377396|ref|ZP_17354680.1| aspartate racemase [Bacillus cereus BAG1O-2]
gi|423440505|ref|ZP_17417411.1| aspartate racemase [Bacillus cereus BAG4X2-1]
gi|423532921|ref|ZP_17509339.1| aspartate racemase [Bacillus cereus HuB2-9]
gi|401639205|gb|EJS56945.1| aspartate racemase [Bacillus cereus BAG1O-2]
gi|402419648|gb|EJV51927.1| aspartate racemase [Bacillus cereus BAG4X2-1]
gi|402464643|gb|EJV96333.1| aspartate racemase [Bacillus cereus HuB2-9]
Length = 224
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 95/223 (42%), Gaps = 40/223 (17%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDIDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE AG I MPC+ +H++ +E+ S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESAGVDFIAMPCNTAHLYFEELQHSLSIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + + + E + R+ +LA A + AG YQ+ + E + +K +
Sbjct: 103 IVDETLRAIPE---------TVKRVALLATEATVQAGIYQDGIAKRNIEYLHNEK--WQE 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
+ + + +VE AR L AL + L ++T I+A D+
Sbjct: 152 MINQIITCIKSGEVEEARKLWS-ALVLQLKDEIDTAIIACTDL 193
>gi|241205465|ref|YP_002976561.1| aspartate racemase [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240859355|gb|ACS57022.1| aspartate racemase [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 239
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 74/146 (50%), Gaps = 13/146 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
L+ AGA CI++ + H+ D+V + SVP +H+ + AK L A K PL +
Sbjct: 71 LQIAGAGCILICTNTMHLIADKVAEKISVPLIHIIDETAKSLHAAGRK-----RPL---L 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKA--TMEHTLIPALDAL-NRKDVEGARNLLRIA 277
LA + GFY ++++ G ++++PD T H +I D L K ++ +R+ L
Sbjct: 123 LATRYTMEHGFYSDRMKSLGLDIMVPDAGDRTTVHDII--FDELCAGKVLDSSRDKLMAV 180
Query: 278 LQVLLVRAVNTVILASDDMQDLLPPD 303
+ + +++IL ++ +L P+
Sbjct: 181 ISRAIDNGADSIILGCTEICLILDPN 206
>gi|23100846|ref|NP_694313.1| amino acid racemase [Oceanobacillus iheyensis HTE831]
gi|22779080|dbj|BAC15347.1| amino acid racemase [Oceanobacillus iheyensis HTE831]
Length = 231
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LEKAGA I++ + H +++ K S+P LH+++ A ++K N+ IG+
Sbjct: 71 LEKAGADFIIICTNTMHKTVEDIEKAISIPILHIADATATKIKSTNINT--------IGL 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPD 247
L + FY+ +++ G V++PD
Sbjct: 123 LGTTYTMQHDFYKNRIKMSGINVIIPD 149
>gi|221065474|ref|ZP_03541579.1| aspartate racemase [Comamonas testosteroni KF-1]
gi|220710497|gb|EED65865.1| aspartate racemase [Comamonas testosteroni KF-1]
Length = 252
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 14/150 (9%)
Query: 162 EKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVL 221
+ GA C+++ + H D+V S+PF+H+++ V + A ++ L G+L
Sbjct: 93 QAGGADCVLLCTNTMHKVADQVAAAVSIPFVHIADPVGAAARAAGVQVL--------GLL 144
Query: 222 AKNAILTAGFYQEKLQHE-GFEVVLPDKA--TMEHTLI-PALDALNRKDVEGARNLLRIA 277
+ F +E+L+ + G +V++P +A T H +I L A DV +R L + A
Sbjct: 145 GTRFTMEQPFMRERLEQQFGLKVLVPGEAERTQVHRIIYEELCAGQISDV--SRKLYQRA 202
Query: 278 LQVLLVRAVNTVILASDDMQDLLPPDDPLL 307
++ L R V+L ++ L+ P D LL
Sbjct: 203 IESLAARGAQAVVLGCTEIGLLIKPQDSLL 232
>gi|398835367|ref|ZP_10592730.1| aspartate racemase [Herbaspirillum sp. YR522]
gi|398216357|gb|EJN02905.1| aspartate racemase [Herbaspirillum sp. YR522]
Length = 375
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
L++AGA IV PC+ H W D + +P LH++E L++A P +P +IG+
Sbjct: 198 LKQAGAHFIVFPCNTWHAWFDVIAAEVKLPMLHIAEATVLSLQKAT--PKLPDNP-KIGL 254
Query: 221 LAKNAILTAGFYQ------EKLQHEGFEVVLPDKATMEHTLIPALDALNRKDV-EGARNL 273
+A + + YQ EK +LP + + D + D+ G + L
Sbjct: 255 IATTGTIDSELYQKAGARMEKFGGPHITWILPKPEFQDKAMSGIYDGVKAGDMAHGTKLL 314
Query: 274 LRIALQVL 281
+AL+V+
Sbjct: 315 NEVALEVI 322
>gi|299536870|ref|ZP_07050177.1| hypothetical protein BFZC1_12648 [Lysinibacillus fusiformis ZC1]
gi|424740022|ref|ZP_18168433.1| hypothetical protein C518_4255 [Lysinibacillus fusiformis ZB2]
gi|298727694|gb|EFI68262.1| hypothetical protein BFZC1_12648 [Lysinibacillus fusiformis ZC1]
gi|422946345|gb|EKU40757.1| hypothetical protein C518_4255 [Lysinibacillus fusiformis ZB2]
Length = 232
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 152 ENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLE 211
E L + LE+AGA I++ + H D + ++P LH+++ AK++KEA ++
Sbjct: 62 EVLAQAAQALERAGAELIIICTNTMHKVIDVIEPAITIPILHIADATAKQIKEAGLQ--- 118
Query: 212 AGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD 247
+I +L + FY+ +++ G EV++PD
Sbjct: 119 -----KIALLGTKYTMEQAFYKARVESFGIEVIVPD 149
>gi|424871455|ref|ZP_18295117.1| aspartate racemase [Rhizobium leguminosarum bv. viciae WSM1455]
gi|393167156|gb|EJC67203.1| aspartate racemase [Rhizobium leguminosarum bv. viciae WSM1455]
Length = 239
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGG 141
T+G++GG S +S+ + ++ + L + EL+ H + + +
Sbjct: 3 TIGLIGGMSFESSAVYYRAVNEMVRDRKG--------GLASAELILHSVNFEEIVALQKA 54
Query: 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
G D + L + L+ AGA CI++ + H+ D+V + SVP +H+ + AK
Sbjct: 55 G---DWDMAASRLADVALRLQIAGAGCILICTNTMHLIADKVAEKISVPLIHIIDETAKS 111
Query: 202 LKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA--TMEHTLI 256
L A K PL +LA + GFY ++++ G ++++PD + T H +I
Sbjct: 112 LHAAGRK-----RPL---LLATRYTMEHGFYSDRMKSLGLDIMVPDASDRTTVHDII 160
>gi|337746780|ref|YP_004640942.1| hypothetical protein KNP414_02511 [Paenibacillus mucilaginosus
KNP414]
gi|379720663|ref|YP_005312794.1| hypothetical protein PM3016_2769 [Paenibacillus mucilaginosus 3016]
gi|336297969|gb|AEI41072.1| YgeA [Paenibacillus mucilaginosus KNP414]
gi|378569335|gb|AFC29645.1| YgeA [Paenibacillus mucilaginosus 3016]
Length = 230
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
L++AGA C+++ + H E+ +PFLH++ A E++ A RIG+
Sbjct: 71 LQRAGADCLLLCTNTMHRLAAEIRGSVEIPFLHIAHAAADEIR--------AKGCGRIGL 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDV-EGARNLLRIALQ 279
L + FY+ +L+ G V++PD+ + D L R + +R ++
Sbjct: 123 LGTVYTMEGDFYRSELEERGIGVLIPDEEDRQTVNAVIYDELCRGIILPESREKFVSVIR 182
Query: 280 VLLVRAVNTVILASDDMQDLLPPDD 304
L R V+L ++ LL DD
Sbjct: 183 RLQARGAEGVVLGCTEIGLLLRQDD 207
>gi|442805114|ref|YP_007373263.1| aspartate racemase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740964|gb|AGC68653.1| aspartate racemase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 240
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 80/172 (46%), Gaps = 24/172 (13%)
Query: 160 FLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIG 219
LE+ GA I +PC ++ +++ +C+ +VP + + A LK + + R+G
Sbjct: 72 ILEELGADFIAVPCVTAYFFYERLCREINVPIIDMIGETAIYLKNSGVS--------RVG 123
Query: 220 VLAKNAILTAGFYQEKLQHEGFEVVLPDKA------TMEHTLIPALDALNRKDVEGARN- 272
++A + +T GF ++ L+ G EVV P + M + + A + + +N
Sbjct: 124 IMATDGTVTGGFLRKGLEKYGLEVVQPSASGQKLVMNMIYNGVKANMPIVMDEFYAVKNE 183
Query: 273 LLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIKW 324
LL +V+++ ++ D D+ P C+D M+ LA+ ++ +
Sbjct: 184 LLEAKAEVIVLGCTELSVIHRD--YDIGP-------GCLDAMEVLAQKSVLF 226
>gi|372324160|ref|ZP_09518749.1| Aspartate racemase [Oenococcus kitaharae DSM 17330]
gi|366982968|gb|EHN58367.1| Aspartate racemase [Oenococcus kitaharae DSM 17330]
Length = 236
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 111/258 (43%), Gaps = 35/258 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSH----DRSSFSSL 136
N GI+GG +T + + QL+ + D +L N + +H DR+++
Sbjct: 3 NFFGILGGMGTRATEAFIDSINQLARAQKDQDYL-------NYIVFNHAAIPDRTAYILG 55
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
K + ++E++++ + + I++ C+ +H + ++ K +P L +
Sbjct: 56 RSKKNPL----PFLIEDVQQ----MNQLSPDFILITCNTAHYFLPQLQKAAHMPILDMPS 107
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
A K+ + K L R+G+LA + + A YQ + G++ +LPD +
Sbjct: 108 LAAAACKQFSSKNL------RVGLLATSGTIDAAIYQPHIAALGYQTILPDPVWQQKV-- 159
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAV-----NTVILASDDMQDLLPPDDPLLKKCI 311
+D + KDV+ A + R+ L+ + + VILA ++ + + I
Sbjct: 160 --MDVI-YKDVKEADQVNRVRFHALIEHMLIDEKCDCVILACTELSVAQQREAYESDRVI 216
Query: 312 DPMDALARSTIKWVKSAE 329
D LAR ++ +S +
Sbjct: 217 DAQQLLARRAVQLARSLQ 234
>gi|401682704|ref|ZP_10814594.1| aspartate racemase [Streptococcus sp. AS14]
gi|400183944|gb|EJO18191.1| aspartate racemase [Streptococcus sp. AS14]
Length = 230
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE+AGA IV+ + H ++ + ++P LH+++ A+ L ++ ++G+
Sbjct: 71 LEQAGADFIVICTNTMHKVAPQIQEQITIPILHIAQATAQALLTDGIQ--------KVGL 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
L +T FY+EKL G EV++PD+A
Sbjct: 123 LGTKYTMTQDFYKEKLIESGLEVLIPDQA 151
>gi|418399194|ref|ZP_12972745.1| aspartate racemase [Sinorhizobium meliloti CCNWSX0020]
gi|359506927|gb|EHK79438.1| aspartate racemase [Sinorhizobium meliloti CCNWSX0020]
Length = 229
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 93/222 (41%), Gaps = 22/222 (9%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+GI+GG S ST +L +L+ E L + ELL F +
Sbjct: 2 KTIGILGGMSAASTQIYYRELCRLTRES--------LGGLHSPELLIRS-VDFDEIEKLQ 52
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
+ D + + L K + LE+ GA ++M + H D++ G S+PF+H+++ A
Sbjct: 53 ASSEWDAA--ADILNEKAIALERGGADLLIMATNTMHKVADKILSGVSIPFVHIADATAT 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALD 260
+ + + R G++A + FY ++L G +PD T D
Sbjct: 111 AILDGGFR--------RPGLMATAFTMEQNFYTDRLTARGLSPTVPDADDRAETHRIIYD 162
Query: 261 ALNRKDVEGARNLL--RIALQVLLVRAVNTVILASDDMQDLL 300
L R V L RIA Q L+ + + +IL ++ LL
Sbjct: 163 ELCRDVVREESRLTYERIA-QGLIDQGSDCLILGCTEVGMLL 203
>gi|260890046|ref|ZP_05901309.1| hypothetical protein GCWU000323_01208 [Leptotrichia hofstadii
F0254]
gi|260860069|gb|EEX74569.1| aspartate racemase [Leptotrichia hofstadii F0254]
Length = 231
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LEKAGA IV+ + H +++ + S+P LH++E A+++ E +K I +
Sbjct: 73 LEKAGADFIVICTNTMHKVVNQIKEKISIPILHIAEMTAEKILEKGLK--------NIAL 124
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
L + FY+ KL +G V++PDK +E
Sbjct: 125 LGTKYTMEQDFYKSKLIEKGINVIIPDKNDIE 156
>gi|146300252|ref|YP_001194843.1| aspartate racemase [Flavobacterium johnsoniae UW101]
gi|146154670|gb|ABQ05524.1| aspartate racemase [Flavobacterium johnsoniae UW101]
Length = 230
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 64/126 (50%), Gaps = 18/126 (14%)
Query: 160 FLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIG 219
FL+ GA IV+ + H+ D++ + +P +H++ A E+++ N+K ++G
Sbjct: 70 FLKSGGAEAIVLCANTMHLIADKLQEAIGLPVIHIAAETAIEIQKQNLK--------KVG 121
Query: 220 VLAKNAILTAGFYQEKLQHEGFEVVLP----DKATMEHTLIPAL------DALNRKDVEG 269
+L + F+++KL+ +G E V+P DK + +T+ L D ++ +E
Sbjct: 122 LLGTKFTMELDFFKDKLKQKGIEAVIPASQEDKDFVHYTIFEELGRGIVTDETKKRYLEI 181
Query: 270 ARNLLR 275
A L++
Sbjct: 182 ADELIK 187
>gi|257126498|ref|YP_003164612.1| aspartate racemase [Leptotrichia buccalis C-1013-b]
gi|257050437|gb|ACV39621.1| aspartate racemase [Leptotrichia buccalis C-1013-b]
Length = 231
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LEKAGA IV+ + H +++ + S+P LH++E A+++ E +K I +
Sbjct: 73 LEKAGADFIVICTNTMHKVVNQIKEKISIPILHIAEMTAEKILEKGLK--------NIAL 124
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
L + FY+ KL +G V++PDK +E
Sbjct: 125 LGTKYTMEQDFYKSKLIEKGINVIIPDKNDIE 156
>gi|229076262|ref|ZP_04209229.1| amino-acid racemase [Bacillus cereus Rock4-18]
gi|228706911|gb|EEL59117.1| amino-acid racemase [Bacillus cereus Rock4-18]
Length = 235
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 12/136 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE AG I MPC+ +H++ +E+ S+P L++ + + + E + R+ +
Sbjct: 81 LESAGVDFIAMPCNTAHLYFEELQHSLSIPILNIVDETLRAIPE---------TVKRVAL 131
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQV 280
LA A + AG YQ+ + E + +K + + + + +VE AR L AL +
Sbjct: 132 LATEATVQAGIYQDGIAKRNIEYLHNEK--WQEMINQIITCIKSGEVEEARKLWS-ALVL 188
Query: 281 LLVRAVNTVILASDDM 296
L ++T I+A D+
Sbjct: 189 QLKDEIDTAIIACTDL 204
>gi|167637972|ref|ZP_02396250.1| aspartate racemase family protein [Bacillus anthracis str. A0193]
gi|177651115|ref|ZP_02933946.1| aspartate racemase family protein [Bacillus anthracis str. A0174]
gi|254736866|ref|ZP_05194572.1| aspartate racemase family protein [Bacillus anthracis str. Western
North America USA6153]
gi|167513789|gb|EDR89157.1| aspartate racemase family protein [Bacillus anthracis str. A0193]
gi|172082941|gb|EDT68003.1| aspartate racemase family protein [Bacillus anthracis str. A0174]
Length = 224
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 105/250 (42%), Gaps = 46/250 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I M C+ +H++ +E+ + S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGAGFIAMSCNTAHLYFEELQQSLSIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + K + E + R+ +L A + AG YQ+ + E + ++ +
Sbjct: 103 IVDETLKAIPE---------TAKRVALLETEATVQAGIYQDGIAKRNIEYIHYEQ--WQE 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDP 313
++ + + +VE AR L AL + L V+T I+A D+ + D +D
Sbjct: 152 SINQIITYIKSGEVEEARELWS-ALVLQLKDEVDTAIIACTDLNVVASED------FVDS 204
Query: 314 MDALARSTIK 323
LA++ ++
Sbjct: 205 TQCLAKAVVR 214
>gi|228941934|ref|ZP_04104478.1| amino-acid racemase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228974865|ref|ZP_04135427.1| amino-acid racemase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228981458|ref|ZP_04141756.1| amino-acid racemase [Bacillus thuringiensis Bt407]
gi|384188830|ref|YP_005574726.1| aspartate racemase [Bacillus thuringiensis serovar chinensis CT-43]
gi|410677153|ref|YP_006929524.1| putative amino-acid racemase RacX [Bacillus thuringiensis Bt407]
gi|452201231|ref|YP_007481312.1| Aspartate racemase [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
gi|228778283|gb|EEM26552.1| amino-acid racemase [Bacillus thuringiensis Bt407]
gi|228784869|gb|EEM32886.1| amino-acid racemase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228817767|gb|EEM63848.1| amino-acid racemase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|326942539|gb|AEA18435.1| aspartate racemase [Bacillus thuringiensis serovar chinensis CT-43]
gi|409176282|gb|AFV20587.1| putative amino-acid racemase RacX [Bacillus thuringiensis Bt407]
gi|452106624|gb|AGG03564.1| Aspartate racemase [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
Length = 224
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 95/223 (42%), Gaps = 40/223 (17%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVARCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHETMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE G I MPC+ +H++ +E+ + S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGVDFIAMPCNTAHLYFEELQRSLSIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + + + E N K ++ +LA A + AG YQ + E + +K +
Sbjct: 103 IVDETLQAIPE-NTK--------KVALLATEATVQAGIYQNGIAKRNIEYIHHEK--WQE 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
+ + + +VE AR L AL + L V+T I+A D+
Sbjct: 152 MINQIITYIKSGEVEEARELWN-ALVLQLKDEVDTAIIACTDL 193
>gi|241896564|ref|ZP_04783860.1| aspartate racemase [Weissella paramesenteroides ATCC 33313]
gi|241870286|gb|EER74037.1| aspartate racemase [Weissella paramesenteroides ATCC 33313]
Length = 241
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 87/193 (45%), Gaps = 22/193 (11%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGG 141
+ GI+GG +T N + + +L+ D +L D ++ DR+++ S + K
Sbjct: 11 SFGIIGGMGTIATENFVHIINELTVTHKDQDYL---DYIVFNHASIPDRTAYISDHTKQN 67
Query: 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
+ + ++ + L G IV+ C+ +H + E+ K VP + E K
Sbjct: 68 PL----PFLASDVEK----LNYLGVSFIVITCNTAHYFLPELQKQSEVPIFSMPELAVKA 119
Query: 202 LKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL-- 259
K+ E +R+G++A N ++AG YQ+ L + V+PD+ + L+ +L
Sbjct: 120 CKK------ETNKSIRVGIMATNGTISAGIYQKALIGKNVTPVIPDE--YQQNLVMSLIY 171
Query: 260 -DALNRKDVEGAR 271
D NR V+ +
Sbjct: 172 EDIKNRNFVDQEK 184
>gi|440228622|ref|YP_007335706.1| aspartate/glutamate racemase family protein [Rhizobium tropici CIAT
899]
gi|440040330|gb|AGB73160.1| aspartate/glutamate racemase family protein [Rhizobium tropici CIAT
899]
Length = 229
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 93/226 (41%), Gaps = 24/226 (10%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELL--SHDRSSFSSLNCK 139
T+GI+GG S ST +L +L+ E L + ELL S D L
Sbjct: 3 TIGILGGMSAASTQIYYRELCRLTREN--------LGGLHSPELLIRSVDFDEIEKLQAS 54
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
D ++ L K + LE+ GA ++M + H D + G S+PF+H+++ A
Sbjct: 55 S-----DWNVAANILNEKAIALERGGADLLIMATNTMHKVADTILDGVSIPFIHIADATA 109
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
+ + + R G++A + FY +L G +P+ T
Sbjct: 110 TAILNSGFR--------RPGLMATAFTMEQNFYTARLSALGLLPTIPEAGDRAETHRIIY 161
Query: 260 DALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
D L R V E +R + + L+ R + +IL ++ LL D+
Sbjct: 162 DELCRDVVREESRLTYELIARRLIDRGCDCLILGCTEVGMLLNQDN 207
>gi|419586279|ref|ZP_14122243.1| putative racemase [Campylobacter coli 67-8]
gi|380566300|gb|EIA88978.1| putative racemase [Campylobacter coli 67-8]
Length = 230
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 27/175 (15%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLS----GEENDFPFLLCSDPLLNKELLSHDRSSFSSLN 137
T+GI+GG S +ST+ + + G N LL S +N E ++ N
Sbjct: 3 TIGIIGGMSFESTITYYKTINETINNQLGNLNSAKILLYS---VNFEEIA---------N 50
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
+ G + I+ +K LE GA I++ + H D++ K +P +H+++
Sbjct: 51 LQKNGEWEKAAQILGECAKK---LELGGADFILIATNTMHKIFDQIQKNIKIPLIHIAQS 107
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
AK LK+ N+ IG+L + FY+ L+ E + P+++ M+
Sbjct: 108 TAKILKQQNIHT--------IGLLGTQYTMMEDFYKNTLKKENINTITPNQSDMQ 154
>gi|385331144|ref|YP_005885095.1| aspartate racemase [Marinobacter adhaerens HP15]
gi|311694294|gb|ADP97167.1| aspartate racemase [Marinobacter adhaerens HP15]
Length = 231
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 19/169 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +ST +L+ G +N L + +L S D + +L KG
Sbjct: 2 KTIGLLGGMSWESTQTYY-RLIN-EGVKNRLGGLHSAKLVL----FSVDFAEIEALQHKG 55
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
D + L + ++KAGA +V+ + H E+ + +P LH+++ A+
Sbjct: 56 -----DWPATADILTGAALSVQKAGADFLVIGTNTMHKVAPEIEQAIGIPLLHIADATAQ 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
LK+ + R G+L + FY+E+L+ G +V+ PD++
Sbjct: 111 LLKKEGVT--------RAGLLGTRFTMEQAFYRERLEAAGIDVLTPDES 151
>gi|402848871|ref|ZP_10897118.1| Aspartate racemase [Rhodovulum sp. PH10]
gi|402500885|gb|EJW12550.1| Aspartate racemase [Rhodovulum sp. PH10]
Length = 236
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 35/236 (14%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLN----KELLSHDRSSFSSL 136
T+G++GG S +ST ++ + E L +D L+ +E+ + R+
Sbjct: 2 RTIGLIGGMSWESTQGYYRRINEQVRERR--GGLRSADILMRSVDFEEVAALQRAG---- 55
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+ G G L + I +N LE+ GA C+++ + H D V + VP +H+ +
Sbjct: 56 DWDGAGRML--AGIAKN-------LEQGGAGCVLICTNTMHKVADAVERAIGVPLVHIVD 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLP---DKATME 252
A+ L+ A K PL +LA + FY+ +++ G E ++P D+A +
Sbjct: 107 ATAEGLRRAGAKK-----PL---LLATRFTMEEAFYRGRMRERYGIEALVPETDDRAMLH 158
Query: 253 HTLIPALDALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLL 307
H + D L R V E +R R + + ++VIL ++ L+ D +L
Sbjct: 159 HVI---FDELCRGVVEESSREKFRTVIARGREQGADSVILGCTEIGMLIGAADSVL 211
>gi|154496370|ref|ZP_02035066.1| hypothetical protein BACCAP_00658 [Bacteroides capillosus ATCC
29799]
gi|150274453|gb|EDN01530.1| aspartate racemase [Pseudoflavonifractor capillosus ATCC 29799]
Length = 235
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 101/248 (40%), Gaps = 21/248 (8%)
Query: 77 LNQANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSL 136
+N+A +GI+GG +T + +++ D C L +LS R +
Sbjct: 1 MNEAK-LGILGGMGPQATQDFYQRIL-------DRTDAACDQEHLPTVILSDTRMPDRTS 52
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
GG D L + LE+ G I +PC+ SH + D + S+P +H+
Sbjct: 53 AILGG----DAEGCYRRLLQDAKTLEQVGCTAIAIPCNTSHFFADRLQGELSIPIIHM-- 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
V + +K + P ++G+LA + + G YQ + + +G P + +
Sbjct: 107 -VRETVKVLSSDP----GVHKVGILATDGTVRTGVYQRECEAQGLTAFSPPPEVQKVVMS 161
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDA 316
D + +K +G+R + + L + IL ++ + PL + +D MD
Sbjct: 162 IIYDEI-KKGEKGSREKFAVMDRCLREAGCDAAILGCTELS-VYRTYHPLPEFYVDAMDI 219
Query: 317 LARSTIKW 324
LA I +
Sbjct: 220 LAERCITY 227
>gi|390952284|ref|YP_006416043.1| aspartate racemase [Thiocystis violascens DSM 198]
gi|390428853|gb|AFL75918.1| aspartate racemase [Thiocystis violascens DSM 198]
Length = 232
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 30/170 (17%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSG---EENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+G++GG +T++ + KLV L+ +++ P ++ + P + DRS+ ++ +
Sbjct: 4 IGVLGGMGPAATVDFMAKLVALTPACCDQDHLPVVVVTLPRVP------DRSA--AILGR 55
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G D L L+ L +A +V+PC SH W+DE+ P LH++
Sbjct: 56 G-----QDPL--PALKEGIALLNRADVGLVVIPCSTSHHWYDELSAASHAPILHIARAAV 108
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQ--HEGFEVVLPD 247
+ R +LA L +GF+Q +L F++ PD
Sbjct: 109 SRVPRGE----------RALILATRGALASGFFQRELAAWETPFDIPSPD 148
>gi|303325617|ref|ZP_07356060.1| aspartate racemase [Desulfovibrio sp. 3_1_syn3]
gi|345892211|ref|ZP_08843034.1| hypothetical protein HMPREF1022_01694 [Desulfovibrio sp.
6_1_46AFAA]
gi|302863533|gb|EFL86464.1| aspartate racemase [Desulfovibrio sp. 3_1_syn3]
gi|345047350|gb|EGW51215.1| hypothetical protein HMPREF1022_01694 [Desulfovibrio sp.
6_1_46AFAA]
Length = 230
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 27/157 (17%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLR-IG 219
LEK GA IV+ + H + S+P LH+++ A E+ G LR +G
Sbjct: 71 LEKGGADFIVICTNTMHKVAHRIQAAVSIPLLHIADVTAAEI---------LGRGLRSVG 121
Query: 220 VLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDV---------EGA 270
+L + FY +L+ +G EV++PD P D +N+ E +
Sbjct: 122 LLGTRYTMEEDFYCGRLRRQGLEVLIPDA--------PERDMINKVIFEELCLGVIREDS 173
Query: 271 RNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLL 307
R + A+ L R VIL ++ LL P+D L
Sbjct: 174 RKKFQAAMAGLAGRGARGVILGCTEIGLLLRPEDAEL 210
>gi|305432494|ref|ZP_07401656.1| aspartate racemase [Campylobacter coli JV20]
gi|419536734|ref|ZP_14076211.1| aspartate racemase [Campylobacter coli 111-3]
gi|419537909|ref|ZP_14077274.1| aspartate racemase [Campylobacter coli 90-3]
gi|419541055|ref|ZP_14080277.1| aspartate racemase [Campylobacter coli Z163]
gi|419543353|ref|ZP_14082418.1| aspartate racemase [Campylobacter coli 2548]
gi|419543869|ref|ZP_14082842.1| putative racemase [Campylobacter coli 2553]
gi|419547450|ref|ZP_14086170.1| aspartate racemase [Campylobacter coli 2680]
gi|419549371|ref|ZP_14087968.1| aspartate racemase [Campylobacter coli 2685]
gi|419550373|ref|ZP_14088880.1| aspartate racemase [Campylobacter coli 2688]
gi|419552788|ref|ZP_14091076.1| aspartate racemase [Campylobacter coli 2692]
gi|419554806|ref|ZP_14092934.1| aspartate racemase [Campylobacter coli 2698]
gi|419556880|ref|ZP_14094853.1| aspartate racemase [Campylobacter coli 84-2]
gi|419558438|ref|ZP_14096303.1| aspartate racemase [Campylobacter coli 80352]
gi|419560539|ref|ZP_14098180.1| aspartate racemase [Campylobacter coli 86119]
gi|419563238|ref|ZP_14100702.1| aspartate racemase [Campylobacter coli 1091]
gi|419563690|ref|ZP_14101087.1| aspartate racemase [Campylobacter coli 1098]
gi|419566633|ref|ZP_14103887.1| aspartate racemase [Campylobacter coli 1148]
gi|419568822|ref|ZP_14105951.1| aspartate racemase [Campylobacter coli 1417]
gi|419570407|ref|ZP_14107451.1| aspartate racemase [Campylobacter coli 7--1]
gi|419571892|ref|ZP_14108830.1| aspartate racemase [Campylobacter coli 132-6]
gi|419573707|ref|ZP_14110497.1| aspartate racemase [Campylobacter coli 1891]
gi|419575069|ref|ZP_14111767.1| aspartate racemase [Campylobacter coli 1909]
gi|419578097|ref|ZP_14114631.1| aspartate racemase [Campylobacter coli 59-2]
gi|419579667|ref|ZP_14116069.1| aspartate racemase [Campylobacter coli 1948]
gi|419581784|ref|ZP_14118074.1| aspartate racemase [Campylobacter coli 1957]
gi|419583444|ref|ZP_14119625.1| aspartate racemase [Campylobacter coli 1961]
gi|419585164|ref|ZP_14121225.1| aspartate racemase [Campylobacter coli 202/04]
gi|419591069|ref|ZP_14126428.1| aspartate racemase [Campylobacter coli 37/05]
gi|419592750|ref|ZP_14127994.1| aspartate racemase [Campylobacter coli LMG 9854]
gi|419595404|ref|ZP_14130507.1| aspartate racemase [Campylobacter coli LMG 23336]
gi|419597327|ref|ZP_14132306.1| aspartate racemase [Campylobacter coli LMG 23341]
gi|419599178|ref|ZP_14134044.1| aspartate racemase [Campylobacter coli LMG 23342]
gi|419599983|ref|ZP_14134759.1| aspartate racemase [Campylobacter coli LMG 23344]
gi|419602802|ref|ZP_14137376.1| aspartate racemase [Campylobacter coli 151-9]
gi|419604045|ref|ZP_14138520.1| putative racemase [Campylobacter coli LMG 9853]
gi|419606514|ref|ZP_14140876.1| aspartate racemase [Campylobacter coli LMG 9860]
gi|419609194|ref|ZP_14143355.1| aspartate racemase [Campylobacter coli H6]
gi|419612502|ref|ZP_14146378.1| putative racemase [Campylobacter coli H9]
gi|419614850|ref|ZP_14148619.1| aspartate racemase [Campylobacter coli H56]
gi|419617102|ref|ZP_14150733.1| aspartate racemase [Campylobacter coli Z156]
gi|169640255|gb|ACA61178.1| aspartate racemase [Campylobacter coli]
gi|304444533|gb|EFM37184.1| aspartate racemase [Campylobacter coli JV20]
gi|380515391|gb|EIA41559.1| aspartate racemase [Campylobacter coli Z163]
gi|380517578|gb|EIA43689.1| aspartate racemase [Campylobacter coli 111-3]
gi|380519456|gb|EIA45534.1| aspartate racemase [Campylobacter coli 90-3]
gi|380520338|gb|EIA46192.1| aspartate racemase [Campylobacter coli 2548]
gi|380520617|gb|EIA46424.1| aspartate racemase [Campylobacter coli 2680]
gi|380526009|gb|EIA51496.1| putative racemase [Campylobacter coli 2553]
gi|380526036|gb|EIA51519.1| aspartate racemase [Campylobacter coli 2685]
gi|380530497|gb|EIA55572.1| aspartate racemase [Campylobacter coli 2692]
gi|380530713|gb|EIA55772.1| aspartate racemase [Campylobacter coli 2688]
gi|380531869|gb|EIA56876.1| aspartate racemase [Campylobacter coli 2698]
gi|380534211|gb|EIA59026.1| aspartate racemase [Campylobacter coli 84-2]
gi|380537029|gb|EIA61614.1| aspartate racemase [Campylobacter coli 86119]
gi|380538787|gb|EIA63223.1| aspartate racemase [Campylobacter coli 1091]
gi|380539354|gb|EIA63732.1| aspartate racemase [Campylobacter coli 80352]
gi|380543627|gb|EIA67807.1| aspartate racemase [Campylobacter coli 1098]
gi|380544804|gb|EIA68810.1| aspartate racemase [Campylobacter coli 1417]
gi|380545984|gb|EIA69947.1| aspartate racemase [Campylobacter coli 1148]
gi|380547118|gb|EIA71046.1| aspartate racemase [Campylobacter coli 7--1]
gi|380550887|gb|EIA74515.1| aspartate racemase [Campylobacter coli 1891]
gi|380552645|gb|EIA76200.1| aspartate racemase [Campylobacter coli 132-6]
gi|380554344|gb|EIA77818.1| aspartate racemase [Campylobacter coli 1909]
gi|380555870|gb|EIA79155.1| aspartate racemase [Campylobacter coli 59-2]
gi|380556642|gb|EIA79886.1| aspartate racemase [Campylobacter coli 1948]
gi|380558517|gb|EIA81695.1| aspartate racemase [Campylobacter coli 1957]
gi|380562581|gb|EIA85437.1| aspartate racemase [Campylobacter coli 202/04]
gi|380563035|gb|EIA85881.1| aspartate racemase [Campylobacter coli 1961]
gi|380569259|gb|EIA91706.1| aspartate racemase [Campylobacter coli 37/05]
gi|380571817|gb|EIA94175.1| aspartate racemase [Campylobacter coli LMG 9854]
gi|380573707|gb|EIA95843.1| aspartate racemase [Campylobacter coli LMG 23336]
gi|380573817|gb|EIA95945.1| aspartate racemase [Campylobacter coli LMG 23341]
gi|380575793|gb|EIA97861.1| aspartate racemase [Campylobacter coli LMG 23342]
gi|380580532|gb|EIB02280.1| aspartate racemase [Campylobacter coli 151-9]
gi|380581025|gb|EIB02757.1| putative racemase [Campylobacter coli LMG 9853]
gi|380583678|gb|EIB05200.1| aspartate racemase [Campylobacter coli LMG 23344]
gi|380584359|gb|EIB05812.1| aspartate racemase [Campylobacter coli H6]
gi|380586848|gb|EIB08113.1| aspartate racemase [Campylobacter coli LMG 9860]
gi|380590174|gb|EIB11199.1| putative racemase [Campylobacter coli H9]
gi|380592271|gb|EIB13183.1| aspartate racemase [Campylobacter coli H56]
gi|380594203|gb|EIB15009.1| aspartate racemase [Campylobacter coli Z156]
Length = 230
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 27/175 (15%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLS----GEENDFPFLLCSDPLLNKELLSHDRSSFSSLN 137
T+GI+GG S +ST+ + + G N LL S +N E ++ N
Sbjct: 3 TIGIIGGMSFESTITYYKTINETINNQLGNLNSAKILLYS---VNFEEIA---------N 50
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
+ G + I+ +K LE GA I++ + H D++ K +P +H+++
Sbjct: 51 LQKNGEWEKAAQILGECAKK---LELGGADFILIATNTMHKIFDQIQKNIKIPLIHIAQS 107
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
AK LK+ N+ IG+L + FY+ L+ E + P+++ M+
Sbjct: 108 TAKILKQQNIHT--------IGLLGTQYTMMEDFYKNALKKENINTITPNQSDMQ 154
>gi|372274399|ref|ZP_09510435.1| putative aspartate/glutamate racemase [Pantoea sp. SL1_M5]
Length = 230
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE+AGA+ IV+ + H ++ +P LH+++ + +++A ++ ++G+
Sbjct: 71 LERAGAQFIVLCTNTMHKVAAQISAATGIPLLHIADATGRRIQQAGVR--------KVGL 122
Query: 221 LAKNAILTAGFYQEKLQHE-GFEVVLPDK 248
LA + FY+ +LQ + G EV+ PD+
Sbjct: 123 LATRFTMEQDFYRGRLQQQFGLEVITPDR 151
>gi|423072005|ref|ZP_17060768.1| aspartate racemase [Desulfitobacterium hafniense DP7]
gi|361857291|gb|EHL09138.1| aspartate racemase [Desulfitobacterium hafniense DP7]
Length = 238
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 70/150 (46%), Gaps = 17/150 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE AGA IV+ + H DE+ G +P LH+++ A++ N++ IG+
Sbjct: 78 LEAAGAEFIVLCTNTMHKVADEIQAGLQIPLLHIADMTAQQALTNNIRT--------IGL 129
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEHTLIPA--LDALNRKDVEGARNLLR 275
L + FY +L+ +G +V+ P DKA + + L +N++ +RN +
Sbjct: 130 LGTRYTMEQDFYSSRLEAQGIKVLTPEEGDKAVVNEVIYQELCLGIINQE----SRNQFK 185
Query: 276 IALQVLLVRAVNTVILASDDMQDLLPPDDP 305
+ L+ + ++L ++ L+ +D
Sbjct: 186 RIIADLVEQGAQGIVLGCTEIGLLIKQEDS 215
>gi|229051548|ref|ZP_04195025.1| Aspartate racemase [Bacillus cereus AH676]
gi|228721790|gb|EEL73257.1| Aspartate racemase [Bacillus cereus AH676]
Length = 148
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 12/90 (13%)
Query: 177 HIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKL 236
H++ +EV + S+P LH+ + AKE+ E N+K RIG+L + FY+ +L
Sbjct: 7 HLFAEEVEQAISIPLLHIGDVSAKEMVEQNIK--------RIGLLGTKQTMEQDFYKSRL 58
Query: 237 QHEGFEVVLP--DKATMEHTLIPALDALNR 264
E ++P ++ T H +I LD L+R
Sbjct: 59 AKYNIETIIPNDEERTFIHHVI--LDELSR 86
>gi|375136204|ref|YP_004996854.1| putative aspartate racemase [Acinetobacter calcoaceticus PHEA-2]
gi|325123649|gb|ADY83172.1| putative aspartate racemase [Acinetobacter calcoaceticus PHEA-2]
Length = 236
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/250 (17%), Positives = 106/250 (42%), Gaps = 28/250 (11%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSG---EENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+GI+GG +T++ + K+++ + ++ P + S P + DR+
Sbjct: 5 IGILGGMGPQATIDAMNKIIRNTPAHCDQEHIPVVTVSIPDI------PDRTQ------- 51
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
+ D+ +E + LE A CI++PC+ +H W +++ K + + E
Sbjct: 52 --AIINQDNKPLEKMAEYLKILEAAQVGCIIIPCNTAHFWFNQLQKRTQTKMISIVESAV 109
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
++++ + + +LA +A + YQ + P A M++ ++ ++
Sbjct: 110 HFIQDSQID--------EVCILATSATINTELYQSQFIENSIGFSTPS-AEMQNKVMQSI 160
Query: 260 DALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPD-DPLLKKCIDPMDALA 318
+++ AR +++ + + +LA ++ +L + + ID D L
Sbjct: 161 YQYKAGNIQQAREMMKEVINFYTNKRNIKFLLACTEIPLILEESIEAYPELFIDTTDVLI 220
Query: 319 RSTIKWVKSA 328
++ I W ++A
Sbjct: 221 KNAIAWYQNA 230
>gi|30264822|ref|NP_847199.1| aspartate racemase [Bacillus anthracis str. Ames]
gi|47530307|ref|YP_021656.1| aspartate racemase [Bacillus anthracis str. 'Ames Ancestor']
gi|49187641|ref|YP_030894.1| aspartate racemase [Bacillus anthracis str. Sterne]
gi|65322123|ref|ZP_00395082.1| COG1794: Aspartate racemase [Bacillus anthracis str. A2012]
gi|165869772|ref|ZP_02214430.1| aspartate racemase family protein [Bacillus anthracis str. A0488]
gi|167633792|ref|ZP_02392115.1| aspartate racemase family protein [Bacillus anthracis str. A0442]
gi|170685960|ref|ZP_02877183.1| aspartate racemase family protein [Bacillus anthracis str. A0465]
gi|170705467|ref|ZP_02895931.1| aspartate racemase family protein [Bacillus anthracis str. A0389]
gi|190568295|ref|ZP_03021203.1| aspartate racemase family protein [Bacillus anthracis str.
Tsiankovskii-I]
gi|227817547|ref|YP_002817556.1| aspartate racemase family protein [Bacillus anthracis str. CDC 684]
gi|229603579|ref|YP_002869030.1| aspartate racemase family protein [Bacillus anthracis str. A0248]
gi|254687563|ref|ZP_05151419.1| aspartate racemase family protein [Bacillus anthracis str.
CNEVA-9066]
gi|254725128|ref|ZP_05186911.1| aspartate racemase family protein [Bacillus anthracis str. A1055]
gi|254741901|ref|ZP_05199588.1| aspartate racemase family protein [Bacillus anthracis str. Kruger
B]
gi|254754501|ref|ZP_05206536.1| aspartate racemase family protein [Bacillus anthracis str. Vollum]
gi|254757334|ref|ZP_05209361.1| aspartate racemase family protein [Bacillus anthracis str.
Australia 94]
gi|386738656|ref|YP_006211837.1| Aspartate racemase family protein [Bacillus anthracis str. H9401]
gi|421508620|ref|ZP_15955532.1| aspartate racemase [Bacillus anthracis str. UR-1]
gi|421639843|ref|ZP_16080432.1| aspartate racemase [Bacillus anthracis str. BF1]
gi|30259497|gb|AAP28685.1| aspartate racemase family protein [Bacillus anthracis str. Ames]
gi|47505455|gb|AAT34131.1| aspartate racemase family protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49181568|gb|AAT56944.1| aspartate racemase family protein [Bacillus anthracis str. Sterne]
gi|164714601|gb|EDR20120.1| aspartate racemase family protein [Bacillus anthracis str. A0488]
gi|167530593|gb|EDR93295.1| aspartate racemase family protein [Bacillus anthracis str. A0442]
gi|170129592|gb|EDS98455.1| aspartate racemase family protein [Bacillus anthracis str. A0389]
gi|170670424|gb|EDT21164.1| aspartate racemase family protein [Bacillus anthracis str. A0465]
gi|190560551|gb|EDV14528.1| aspartate racemase family protein [Bacillus anthracis str.
Tsiankovskii-I]
gi|227002401|gb|ACP12144.1| aspartate racemase family protein [Bacillus anthracis str. CDC 684]
gi|229267987|gb|ACQ49624.1| aspartate racemase family protein [Bacillus anthracis str. A0248]
gi|384388508|gb|AFH86169.1| Aspartate racemase family protein [Bacillus anthracis str. H9401]
gi|401821243|gb|EJT20401.1| aspartate racemase [Bacillus anthracis str. UR-1]
gi|403392931|gb|EJY90178.1| aspartate racemase [Bacillus anthracis str. BF1]
Length = 224
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 105/250 (42%), Gaps = 46/250 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I M C+ +H++ +E+ + S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGAGFIAMSCNTAHLYFEELQQSLSIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + K + E + R+ +L A + AG YQ+ + E + ++ +
Sbjct: 103 IVDETLKAIPE---------TAKRVALLETEATVQAGIYQDGIAKRNIEYIHYEQ--WQE 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDP 313
++ + + +VE AR L AL + L V+T I+A D+ + D +D
Sbjct: 152 SINQIITYIKSGEVEEARELWS-ALVLQLKDEVDTAIIACTDLNVVASED------FVDS 204
Query: 314 MDALARSTIK 323
LA++ ++
Sbjct: 205 AQCLAKAVVR 214
>gi|42783941|ref|NP_981188.1| aspartate racemase [Bacillus cereus ATCC 10987]
gi|42739871|gb|AAS43796.1| aspartate racemase family protein [Bacillus cereus ATCC 10987]
Length = 225
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 18/163 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE G I MPC+ +H++ +E+ S+P L++ + + + + N+K R+ +
Sbjct: 70 LESTGVDFIAMPCNTAHLYFEELQHSLSIPILNIVDETLQIIPK-NVK--------RVAL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQV 280
LA A + AG YQ+ + E + T + + + + +VE AR L AL +
Sbjct: 121 LATEATVQAGIYQDGITKRDIEYI--HHETWQEMINQIITYIKYGEVEEARELWN-ALVL 177
Query: 281 LLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIK 323
L V+T I+A D+ + D +D LA++ ++
Sbjct: 178 QLREEVDTAIIACTDLNVVASED------FVDSSQCLAKAVVR 214
>gi|334337242|ref|YP_004542394.1| aspartate racemase [Isoptericola variabilis 225]
gi|334107610|gb|AEG44500.1| aspartate racemase [Isoptericola variabilis 225]
Length = 238
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 105/252 (41%), Gaps = 39/252 (15%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSF--SSLNCKG 140
VG++GG +T L ++VQ + E D + D ++ DR+ F +
Sbjct: 8 VGVIGGVGPLATAYFLQRVVQRTRAERDQDHV---DMVVLNHATIPDRTDFVLGRSDADP 64
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
G V + + RR LE G +VMPC+ +H + +V +VPF+ + +
Sbjct: 65 GPV------LARDARR----LEDFGVSFLVMPCNTAHYFTQQVLDAITVPFVSIVDVTVA 114
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALD 260
+ + LE +G+LA + + Y + G V+ P+ D
Sbjct: 115 ASRR-RVPGLET-----VGLLATAGTVASRVYDDAFAQHGISVITPEPDGQ--------D 160
Query: 261 ALNR---KDVEGAR----NLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKK--CI 311
+NR + V+ R + LR L+ R + V+L ++ + D LL + +
Sbjct: 161 VVNRVIYEQVKAGRPSDPDALRTVAGRLVERGASVVVLGCTELS-VAAVDHGLLDEPPFL 219
Query: 312 DPMDALARSTIK 323
D MD L R+TI+
Sbjct: 220 DSMDELVRATIE 231
>gi|90418902|ref|ZP_01226813.1| aspartate racemase [Aurantimonas manganoxydans SI85-9A1]
gi|90336982|gb|EAS50687.1| aspartate racemase [Aurantimonas manganoxydans SI85-9A1]
Length = 231
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 25/228 (10%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +S++ L + G + + LL S D S +L +G
Sbjct: 2 RTIGLIGGMSWESSVEYYRILNE--GVRDRLGPTASARCLL----WSFDFSEIEALQHRG 55
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
+L L VE R+ LE AGA +++ + H + VP LH+++ A+
Sbjct: 56 DWDELTARL-VEAARK----LETAGADILLICTNTMHRMAPAIEAAVQVPLLHIADPTAE 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKL-QHEGFEVVLP---DKATMEHTLI 256
+K A ++ ++G+L + FY+ +L + G V++P D+AT+ +
Sbjct: 111 RIKAAGLQ--------KVGLLGTAFTMEQDFYKGRLAERHGLNVLVPNAEDRATIHRVIY 162
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
L A + V+ +R+ R + L+ +VIL ++ L+ P+D
Sbjct: 163 EELVA--GQIVDTSRDAYRAVIARLVDAGAQSVILGCTEIMLLVRPED 208
>gi|154148024|ref|YP_001406048.1| aspartate racemase [Campylobacter hominis ATCC BAA-381]
gi|153804033|gb|ABS51040.1| aspartate racemase [Campylobacter hominis ATCC BAA-381]
Length = 226
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 113/250 (45%), Gaps = 32/250 (12%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
VGI+GG +T++L K+V L+ ++D P ++ ++ L+ DR+++
Sbjct: 4 VGIIGGMGPLATIDLYKKVVFLTNAKSDQENIPLIIDNNTLI------PDRTAYIL---- 53
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G + + ++++ +R L+++G M C+ +H + D + + +P LH+++
Sbjct: 54 -GAKEDPFAELLKSAKR----LKQSGCDAFCMACNTAHFFADRLVEQSGLPILHIAKITV 108
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
+K+ E + ++ VL+ AG Y +L+ GF + M+ +
Sbjct: 109 NAIKK------EYKNVKKVAVLSTIGTQKAGIYDNELKKNGFLTADISQIAMKKLMSCIY 162
Query: 260 DALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLP--PDDPLLKKCIDPMDAL 317
D + +E + ++L + I A ++ LP DD ++ ID + L
Sbjct: 163 DGVKAGKIEDFVPKFK---EILNEIDADIYIAACTEIPLFLPYIGDDKII---IDATNEL 216
Query: 318 ARSTIKWVKS 327
A+ I++ KS
Sbjct: 217 AKEIIRFTKS 226
>gi|423548048|ref|ZP_17524406.1| aspartate racemase [Bacillus cereus HuB5-5]
gi|401176715|gb|EJQ83909.1| aspartate racemase [Bacillus cereus HuB5-5]
Length = 224
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 106/257 (41%), Gaps = 46/257 (17%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDIDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ L+ AG I MPC+ +H++ +E+ S+P L+
Sbjct: 61 --------------KAIIEGAQK----LKSAGVDFIAMPCNTAHLYFEELQHSLSIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + + + E + R+ +LA A + AG YQ+ + E + +K +
Sbjct: 103 IVDETLRAIPE---------TVKRVALLATEATVQAGIYQDGIAKRNIEYLHNEK--WQE 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDP 313
+ + + +VE AR L AL + L ++T I+A D+ + D +D
Sbjct: 152 MISQIITCIKSGEVEEARKLWS-ALVLQLKNEIDTAIIACTDLNVVASED------FVDS 204
Query: 314 MDALARSTIKWVKSAEK 330
LA + ++ S K
Sbjct: 205 AQCLAEAVVRMYLSNTK 221
>gi|196166518|gb|ACG70825.1| FomE [Streptomyces fradiae]
Length = 228
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 72/177 (40%), Gaps = 26/177 (14%)
Query: 77 LNQANTVGIVGGASVDSTLNLLGKLVQLS--GEENDFP-FLLCSDPLLNKELLSHDRSSF 133
++ +GI+GG + N +LV+++ G + + P L SDP + L H S
Sbjct: 1 MDHWQKIGIIGGLGPLACANFYMRLVEMTTAGSDQEHPEVFLLSDPAIPSRL-DHLLSDG 59
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
S VE L+ L++AGA+ I MP + ++DEV VP +
Sbjct: 60 PS--------------PVEQLQDVARRLQEAGAQLIAMPSVTTQAYYDEVSAAVDVPVVD 105
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKAT 250
+ VA L+EA + R + + L G L G V PD AT
Sbjct: 106 MLRVVAVGLREAGVT--------RPALAVTDGALKLGLLHRALVDGGLTPVYPDPAT 154
>gi|392989311|ref|YP_006487904.1| aspartate racemase [Enterococcus hirae ATCC 9790]
gi|392336731|gb|AFM71013.1| aspartate racemase [Enterococcus hirae ATCC 9790]
Length = 239
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 13/103 (12%)
Query: 169 IVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILT 228
IV+ C+ +H + DE+ +P LH+ A EL N + ++ +L +
Sbjct: 80 IVLTCNTAHYFFDELQAATEIPILHMPREAANELVRQN-------TTGKVAILGTEGSMK 132
Query: 229 AGFYQEKLQHEGFEVVLPD---KATMEHTL---IPALDALNRK 265
AG Y+++++ GFE V+PD +A + H + I D LN++
Sbjct: 133 AGIYEKEVRQLGFEAVIPDAQLQAKINHLIYHDIKESDYLNKE 175
>gi|229093861|ref|ZP_04224955.1| amino-acid racemase [Bacillus cereus Rock3-42]
gi|228689540|gb|EEL43351.1| amino-acid racemase [Bacillus cereus Rock3-42]
Length = 230
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 105/250 (42%), Gaps = 46/250 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 8 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 66
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I MPC+ +H++ +E+ + S+P L+
Sbjct: 67 --------------KAIIEGAQK----LESTGASFIAMPCNTAHLYFEELQQSLSIPILN 108
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + K + E + R+ +LA A + +G YQ+ + E + ++ +
Sbjct: 109 IVDETLKAIPE---------TAKRVALLATEATVQSGIYQDGIAKRNIEYIHYEQ--WQE 157
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDP 313
++ + + ++E A L L + L V+T I+A D+ + D +D
Sbjct: 158 SINQIISYIKGGEIEKAHELWN-TLVLQLRDEVDTAIIACTDLNVVASED------FVDS 210
Query: 314 MDALARSTIK 323
LA++ ++
Sbjct: 211 SQCLAKAVVR 220
>gi|229105387|ref|ZP_04236032.1| amino-acid racemase [Bacillus cereus Rock3-28]
gi|228678044|gb|EEL32276.1| amino-acid racemase [Bacillus cereus Rock3-28]
Length = 258
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 66/136 (48%), Gaps = 12/136 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE G I MPC+ +H++ +E+ + S+P L++ + + + E + R+ +
Sbjct: 104 LESTGVDFIAMPCNTAHLYFEELQRSLSIPILNIVDETLRAIPE---------TVKRVAL 154
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQV 280
LA A + AG YQ+ + E + +K + + + + +VE AR L AL +
Sbjct: 155 LATEATVQAGIYQDGIAKRNIEYLHNEK--WQEMINQIITCIKSGEVEEARKLWS-ALVL 211
Query: 281 LLVRAVNTVILASDDM 296
L ++T I+A D+
Sbjct: 212 QLKDEIDTAIIACTDL 227
>gi|423417329|ref|ZP_17394418.1| aspartate racemase [Bacillus cereus BAG3X2-1]
gi|401108057|gb|EJQ15990.1| aspartate racemase [Bacillus cereus BAG3X2-1]
Length = 224
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE G I MPC+ +H++ +E+ + ++P L++ + + + E + R+ +
Sbjct: 70 LESTGVDFIAMPCNTAHLYFEELQRSITIPILNIVDETLQAIPE---------TAKRVAL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQV 280
LA A + AG YQ+++ E + ++ + + + + ++E AR L + L +
Sbjct: 121 LATEATVQAGIYQDEIIKRNIEYIHNEQ--WQEMINQIITCIKGGEIEEARKLWSV-LVL 177
Query: 281 LLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIK 323
L V+T I+A D+ ++ D +D LA++ ++
Sbjct: 178 QLKDEVDTAIIACTDLNVVVSED------FVDSSQCLAKAVVR 214
>gi|125716925|ref|YP_001034058.1| amino acid recemase [Streptococcus sanguinis SK36]
gi|125496842|gb|ABN43508.1| Amino acid recemase, putative [Streptococcus sanguinis SK36]
Length = 232
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE+AGA IV+ + H ++ ++P LH+++ A+ L ++ ++G+
Sbjct: 71 LEQAGADFIVICTNTMHKVAPQIQDKITIPILHIAQATAQALLTDGIQ--------KVGL 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
L +T FY+EKL G EV++PD+A
Sbjct: 123 LGTKYTMTQDFYKEKLIESGLEVLIPDQA 151
>gi|157691918|ref|YP_001486380.1| aspartate racemase [Bacillus pumilus SAFR-032]
gi|157680676|gb|ABV61820.1| aspartate racemase [Bacillus pumilus SAFR-032]
Length = 232
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 114/254 (44%), Gaps = 29/254 (11%)
Query: 80 ANTVGIVGGASVDSTLNLLGKLVQLS---GEENDFPFLLCSDPLLNKELLSHDRSSFSSL 136
+ T+GI+GG +T++L+ K++ + +++ + + P + DR+
Sbjct: 2 STTIGIMGGMGPLATIDLMKKIISHTPAIKDQDHLHVIADNYPQIP------DRT----- 50
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
N G + ++ + +R LE+AGA I++ C+ +H + + V + +P +++
Sbjct: 51 NAIFGKGEDPTEYMIASAKR----LERAGADFILIACNTAHFFLENVQQSTHIPIMNMPL 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
AK L + + +G+L + L YQ+ H +V+ P + ++ ++
Sbjct: 107 ETAKHLNKHHYT--------SVGLLCTDGTLKTKLYQKACAHHKIDVMTPSEE-LQKNVM 157
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDA 316
+ A+ + + L +A ++L+ + +I ++ +L + K IDP
Sbjct: 158 NGIYAVKAGKLSKGESELALASKILINQGAEAIIAGCTEIPLVLRSTKAV--KVIDPTVI 215
Query: 317 LARSTIKWVKSAEK 330
LA+ +K V EK
Sbjct: 216 LAKEAVKLVYELEK 229
>gi|424895873|ref|ZP_18319447.1| aspartate racemase [Rhizobium leguminosarum bv. trifolii WSM2297]
gi|393180100|gb|EJC80139.1| aspartate racemase [Rhizobium leguminosarum bv. trifolii WSM2297]
Length = 238
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
L+ GA CI++ + H+ DEV SVP +++ + AK L A K PL +
Sbjct: 71 LQAGGAGCILICTNTMHLIADEVAAQVSVPLINIIDETAKSLHAAGRK-----RPL---L 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKA--TMEHTLI 256
LA + GFY ++++ G +V++PD A T H +I
Sbjct: 123 LATRYTMEHGFYADRMKRLGLDVMVPDAADRTTVHDII 160
>gi|308172351|ref|YP_003919056.1| amino acid racemase [Bacillus amyloliquefaciens DSM 7]
gi|384162887|ref|YP_005544266.1| amino acid racemase [Bacillus amyloliquefaciens LL3]
gi|307605215|emb|CBI41586.1| amino acid racemase [Bacillus amyloliquefaciens DSM 7]
gi|328910442|gb|AEB62038.1| amino acid racemase [Bacillus amyloliquefaciens LL3]
Length = 226
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 97/227 (42%), Gaps = 48/227 (21%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + K+V ++ G ND FP ++ C P + L+H
Sbjct: 2 IGILAGMGPKSTGPFVDKVVDECQKIYGAINDIDFPHMMIYSCPTPFYVNKPLNH----- 56
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
++ ++I V LEK G I +PC+ +HI+ +++ K SVP L+
Sbjct: 57 ---------TDMEKAII-----EGAVKLEKTGVDFIAIPCNTAHIYFNQLKKSISVPLLN 102
Query: 194 -VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
V E + K K++ +I +LA + + +G +QE L E ++ + D
Sbjct: 103 MVDETIKKIPKDSK----------KIALLATSPTVQSGIFQEALIRENYDFLHQDSWQT- 151
Query: 253 HTLIPALDALNRKDVEGARN---LLRIALQVLLVRAVNTVILASDDM 296
+D + K +G N L L L V+T I+A D+
Sbjct: 152 -----CVDQIIEKIKQGQINESITLFDELHRELAEKVDTAIIACTDL 193
>gi|229158366|ref|ZP_04286431.1| amino-acid racemase [Bacillus cereus ATCC 4342]
gi|228625113|gb|EEK81875.1| amino-acid racemase [Bacillus cereus ATCC 4342]
Length = 224
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 18/163 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE G + MPC+ +H++ +E+ + SVP L++ + + + E N K R+ +
Sbjct: 70 LESTGVEFLAMPCNTAHLYFEELQRSLSVPILNIVDETLQAIPE-NTK--------RVAL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQV 280
LA A + AG YQ+ + E + +K + ++ + + +E A L AL +
Sbjct: 121 LATEATVQAGIYQDGIIKRNIEYIHHEK--WQESINQIISCIKGGKIEKAHELWN-ALVL 177
Query: 281 LLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIK 323
L V+T I+A D+ + D +D LA++ +K
Sbjct: 178 QLRDEVDTAIIACTDLNVVASED------FVDSTQCLAKAVVK 214
>gi|304384561|ref|ZP_07366907.1| aspartate racemase [Pediococcus acidilactici DSM 20284]
gi|304328755|gb|EFL95975.1| aspartate racemase [Pediococcus acidilactici DSM 20284]
Length = 235
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 169 IVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILT 228
V+ C+ +H ++D++ K P +H+ K++K+ E + RIG++ T
Sbjct: 80 FVIACNTAHYFYDDLQKATEFPIVHMPRETVKQIKK------EFPAAKRIGIIGTPGTTT 133
Query: 229 AGFYQEKLQHEGFEVVLPDKATMEHT---LIPALDALNRKDVEGARNLLRIALQVLLVRA 285
G Y +L EG+EVV P + T + + A N+ D + +LR+ + R
Sbjct: 134 DGIYDRELIAEGYEVVKPTPEIQDLTSKLIFEDIKAQNKVDAQLFYQILRLMTE---ERG 190
Query: 286 VNTVILA 292
VIL
Sbjct: 191 AQVVILG 197
>gi|228936066|ref|ZP_04098875.1| amino-acid racemase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228823613|gb|EEM69436.1| amino-acid racemase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
Length = 224
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 93/223 (41%), Gaps = 40/223 (17%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAGCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I MPC+ +H++ +E+ + S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGASFIAMPCNTAHLYFEELQQSLSIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + K + E + R+ +LA + AG YQE + E + +K +
Sbjct: 103 IVDETLKAIPE---------TAKRVALLATETTVQAGIYQEGIIKRNIEYIHHEK--WQD 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
+ + + ++E A L L + L V+T I+A D+
Sbjct: 152 MINQIITCIKSGEIEKAHELWN-TLVLQLRDEVDTAIIACTDL 193
>gi|257460061|ref|ZP_05625165.1| aspartate racemase [Campylobacter gracilis RM3268]
gi|257442502|gb|EEV17641.1| aspartate racemase [Campylobacter gracilis RM3268]
Length = 226
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 83 VGIVGGASVDSTLNLLGKLVQ---LSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
VGI+GG ++ +L K+++ G++ + P ++ S P + DR++F + K
Sbjct: 4 VGIIGGMGPLASADLYMKIIEETAAGGDQENIPLVIDSYPQI------EDRTAF--ILGK 55
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G ++ L L V L+ AG R M C+ +H + D+V +P +H++E
Sbjct: 56 G-----ENPL--PRLSESAVRLKNAGCRAFAMACNTAHFFADDVEAAAEIPLIHIAEVTV 108
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGF 241
K +++ + +I VLA A Y + L+ G
Sbjct: 109 KAIRK------NYPNAHKIAVLATIGTKKAKIYDDPLKEAGL 144
>gi|374855845|dbj|BAL58700.1| aspartate racemase [uncultured candidate division OP1 bacterium]
Length = 238
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 105/249 (42%), Gaps = 38/249 (15%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSG---EENDFPFLLCSDPLLNKELLSHDRSSFSSLN 137
+GI+GG +T+ L ++V + +++ P L+ S+P + DR SF
Sbjct: 2 RVIGILGGMGPAATVELFRRIVLKTPAHCDQDHIPVLIDSNPKIP------DRGSF---- 51
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
GG +L R LE+ GA +VMPC+ +H + + + +PF+ +
Sbjct: 52 LLAGGPDPRPALC-----RSARKLERLGASFLVMPCNTAHAFLPSLREAVHIPFIDMIAE 106
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEHT 254
A+ ++E+ R+G+LA + Y + G EV+ P D+A +
Sbjct: 107 TARAIRES-----------RVGLLATETTIRTRLYHDACAAYGIEVITPFSDDQARVMEI 155
Query: 255 LIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPM 314
+ A+ R L IA + L R +++ ++ ++P D D +
Sbjct: 156 IY----AIKGGACGFTRELQAIAAR-LRERGARALVVGCTELSLVVPQGD-FAGPVYDAL 209
Query: 315 DALARSTIK 323
D LA + ++
Sbjct: 210 DILAEAAVR 218
>gi|90424471|ref|YP_532841.1| aspartate racemase [Rhodopseudomonas palustris BisB18]
gi|90106485|gb|ABD88522.1| aspartate racemase [Rhodopseudomonas palustris BisB18]
Length = 246
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 111/235 (47%), Gaps = 41/235 (17%)
Query: 81 NTVGIVGGASVDSTLNLLGKL-----VQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSS 135
T+G++GG S +ST +L +L G L +D L+ S D + S
Sbjct: 9 QTIGLIGGMSWESTAVYYRRLNEQIRTRLGG-------LHSADILMR----SIDFDAIVS 57
Query: 136 LNCKGGGVQLDDSL-IVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
L +G D++ I+ ++ R LE+ GA C+++ + H DEV + S+P LH+
Sbjct: 58 LQKQG---HWDEACQILADIAR---VLEQGGASCLLICTNTMHKLADEVQQAVSIPLLHI 111
Query: 195 SECVAKELK-EANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEV--VLPDK--A 249
++ A+ +K E +PL +LA + FY E+L+ EGF + V+PD
Sbjct: 112 ADVTAEAVKAEGLSRPL---------LLATRYTMEQDFYVERLR-EGFGLDPVIPDADGR 161
Query: 250 TMEHTLIPALDALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPD 303
T+ H +I D L + V + +RNL + + + VIL ++ L+ P+
Sbjct: 162 TVIHDII--FDELCQGIVSDASRNLYLDVIAEGKAKGADCVILGCTEIGLLVGPE 214
>gi|404367478|ref|ZP_10972841.1| aspartate racemase [Fusobacterium ulcerans ATCC 49185]
gi|313688570|gb|EFS25405.1| aspartate racemase [Fusobacterium ulcerans ATCC 49185]
Length = 235
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 78/172 (45%), Gaps = 30/172 (17%)
Query: 79 QANTVGIVGGASVDSTLNLLGKLVQLSG---EENDFPFLLCSDPLL---NKELLSHDRSS 132
+ VGI+GG ++T++L K+V+ + +E+ ++ ++P + ++ S
Sbjct: 2 KEKVVGILGGMGPEATIDLFAKIVEETHAKCDEDHLRIIVDNNPKMPSRQDAIMKGTESP 61
Query: 133 FSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFL 192
+++ ENL+ KAGA I++ + +H ++DEV +PFL
Sbjct: 62 VAAMVATA-----------ENLK-------KAGADFIIIGANTAHYFYDEVASQVDIPFL 103
Query: 193 HVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVV 244
H+ + KE+ + ++GV+A NA + Y + G EV+
Sbjct: 104 HIIDEAVKEMMR------QVPGIKKVGVMATNAAVKIKLYDKCCAKFGIEVI 149
>gi|398939952|ref|ZP_10668963.1| aspartate racemase [Pseudomonas sp. GM41(2012)]
gi|398163466|gb|EJM51625.1| aspartate racemase [Pseudomonas sp. GM41(2012)]
Length = 230
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 107/235 (45%), Gaps = 31/235 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +S+ +L+ + PL + +LL + F +
Sbjct: 2 RTIGLIGGMSWESSAEYY-RLINQQVRDR-------LGPLRSAKLLMYS-VDFGPVEQAQ 52
Query: 141 GGVQLDDS--LIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
+ DD+ ++V+ +R L+ GA C+V+ + H ++ S+PFLH+++
Sbjct: 53 HAGRWDDAAAILVDAAQR----LQAGGADCVVLCTNTMHKVAGQIQAAISIPFLHIAD-- 106
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLI 256
A +EAG+ L+IG+L + F +E+L G V++P D+ H +I
Sbjct: 107 -----PAGRAAVEAGA-LKIGLLGTAFTMEQDFLKERLTSMGLTVLVPEADERQAVHRII 160
Query: 257 PALDALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD---PLL 307
D L V E +R + + ++ L R +IL ++ L+ P+ PLL
Sbjct: 161 --YDELCVGVVSEASRKVYQQVIESLTRRGAQAIILGCTEIGLLIKPEHSALPLL 213
>gi|294793056|ref|ZP_06758202.1| putative aspartate racemase [Veillonella sp. 6_1_27]
gi|294794905|ref|ZP_06760040.1| putative aspartate racemase [Veillonella sp. 3_1_44]
gi|416999798|ref|ZP_11940218.1| aspartate racemase [Veillonella parvula ACS-068-V-Sch12]
gi|294454267|gb|EFG22641.1| putative aspartate racemase [Veillonella sp. 3_1_44]
gi|294456001|gb|EFG24365.1| putative aspartate racemase [Veillonella sp. 6_1_27]
gi|333976604|gb|EGL77471.1| aspartate racemase [Veillonella parvula ACS-068-V-Sch12]
Length = 231
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LEKAGA IV+ + H DE+ + +P LH++E A EL+++ + ++G+
Sbjct: 71 LEKAGADYIVICTNTMHKVADEIKRHIHIPLLHIAEMTAVELEKSGIT--------KVGL 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
L + FY+ L++ G VV+P++ +E
Sbjct: 123 LGTKYTMQQDFYKCILENRGIHVVIPNEDQVE 154
>gi|398795621|ref|ZP_10555450.1| aspartate racemase [Pantoea sp. YR343]
gi|398205800|gb|EJM92579.1| aspartate racemase [Pantoea sp. YR343]
Length = 229
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 152 ENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLE 211
E L + LEK GA IV+ + H ++ S+P LH+++ A+ +++A +K
Sbjct: 62 EILADAAISLEKGGADFIVLCTNTMHKVAQQITDAVSIPLLHIADATAQRIRQAGVK--- 118
Query: 212 AGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
++G+LA + FY+ +L EV++PD A
Sbjct: 119 -----KVGLLATAFTMEQEFYKGRLNQSEIEVLVPDAA 151
>gi|373498383|ref|ZP_09588897.1| aspartate racemase [Fusobacterium sp. 12_1B]
gi|371961892|gb|EHO79508.1| aspartate racemase [Fusobacterium sp. 12_1B]
Length = 235
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 78/172 (45%), Gaps = 30/172 (17%)
Query: 79 QANTVGIVGGASVDSTLNLLGKLVQLSG---EENDFPFLLCSDPLL---NKELLSHDRSS 132
+ VGI+GG ++T++L K+V+ + +E+ ++ ++P + ++ S
Sbjct: 2 KEKVVGILGGMGPEATIDLFAKIVEETHAKCDEDHLRIIVDNNPKMPSRQDAIMKGTESP 61
Query: 133 FSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFL 192
+++ ENL+ KAGA I++ + +H ++DEV +PFL
Sbjct: 62 VAAMVATA-----------ENLK-------KAGADFIIIGANTAHYFYDEVASQVDIPFL 103
Query: 193 HVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVV 244
H+ + KE+ + ++GV+A NA + Y + G EV+
Sbjct: 104 HIIDEAVKEMMR------QVPGIKKVGVMATNAAVKIKLYDKCCAKFGIEVI 149
>gi|398857040|ref|ZP_10612744.1| aspartate racemase [Pseudomonas sp. GM79]
gi|398241596|gb|EJN27245.1| aspartate racemase [Pseudomonas sp. GM79]
Length = 230
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 106/235 (45%), Gaps = 31/235 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +S+ +L+ + PL + +LL + F L
Sbjct: 2 RTIGLIGGMSWESSAEYY-RLINQQVRDR-------LGPLRSAKLLMYS-VDFGPLEQAQ 52
Query: 141 GGVQLDDS--LIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
+ DD+ ++V+ RR L+ GA C+V+ + H ++ +PFLH+++
Sbjct: 53 HAGRWDDAAEILVDAARR----LQAGGAECVVLCTNTMHKVAGQIQVAIDIPFLHIAD-- 106
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLI 256
A L+AG+ LR+G+L + F + +L +G V++P D+ H +I
Sbjct: 107 -----PAGQAALDAGA-LRVGLLGTAFTMEQDFIKTRLTAKGLTVLVPEADERLAVHRII 160
Query: 257 PALDALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD---PLL 307
D L + E +R + + ++ L R +IL ++ L+ P+ PLL
Sbjct: 161 --YDELCVGVISEASRQVYQRVIESLTERGAQAIILGCTEIGLLIKPEHSALPLL 213
>gi|345014876|ref|YP_004817230.1| aspartate racemase [Streptomyces violaceusniger Tu 4113]
gi|344041225|gb|AEM86950.1| aspartate racemase [Streptomyces violaceusniger Tu 4113]
Length = 238
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 19/155 (12%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE+AGA I + H + S+PFLH+++ +A + + L G+
Sbjct: 71 LERAGADFIACGSNTMHRVAPAIEAAVSIPFLHIADVIAHAAHQTRARTL--------GL 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLIPALDALNRKDV--EGARNLLRI 276
L ++ A FY+++L G V+P D T+ +I D L R + LR+
Sbjct: 123 LGTLPVMEANFYRDRLADHGLSAVVPEQDDRTLVDRII--FDELTRNIFTDDSRAQYLRV 180
Query: 277 ALQVLLVRAVNTVILASDDMQDLLPPDD----PLL 307
++ L R + +IL ++ L+ P D PLL
Sbjct: 181 -MEQLAARGADAIILGCTEITQLIGPQDFPSLPLL 214
>gi|170023762|ref|YP_001720267.1| aspartate racemase [Yersinia pseudotuberculosis YPIII]
gi|169750296|gb|ACA67814.1| aspartate racemase [Yersinia pseudotuberculosis YPIII]
Length = 231
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 102/235 (43%), Gaps = 41/235 (17%)
Query: 83 VGIVGGASVDSTL---NLLGKLV--QLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLN 137
+G++GG S +ST+ ++ + V QL G L S ++ L S D L
Sbjct: 5 LGLIGGMSWESTIPYYRMINQHVKAQLGG--------LHSAKII---LYSVDFHEIEQLQ 53
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
KG D + L + L+ AGA IV+ + H D++ C +P LH+++
Sbjct: 54 AKG-----DWQTAAQLLSNAAISLKHAGAEVIVVCTNTMHKVADDIEAACGLPLLHIADA 108
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKL-QHEGFEVVLPDKATMEHTLI 256
A ++K+ + +IG+L + FY+ +L + G EV+ PD E
Sbjct: 109 TAVQIKQQGID--------KIGLLGTRYTMEQDFYRGRLTEKHGIEVITPDDTDRE---- 156
Query: 257 PALDALNRKDV------EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDP 305
A++ + +++ E +R+ R ++ L + V +I ++ L+ D
Sbjct: 157 -AVNRIIYEELCLGIISETSRDAYRRVIKKLEAQGVQGIIFGCTEITLLVNAQDA 210
>gi|20808149|ref|NP_623320.1| aspartate racemase [Thermoanaerobacter tengcongensis MB4]
gi|254479423|ref|ZP_05092754.1| aspartate racemase subfamily protein [Carboxydibrachium pacificum
DSM 12653]
gi|20516738|gb|AAM24924.1| Aspartate racemase [Thermoanaerobacter tengcongensis MB4]
gi|214034647|gb|EEB75390.1| aspartate racemase subfamily protein [Carboxydibrachium pacificum
DSM 12653]
Length = 234
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 81/165 (49%), Gaps = 11/165 (6%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
L KAGA IV+PC+ +H + D + + +P +++ E A+ ++ N P +G+
Sbjct: 74 LVKAGADFIVIPCNTAHYFLDYLKREVDIPIINMIEETARYVR--NNYPYAEC----VGL 127
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPD-KATMEHTLIPALDALNRKDV-EGARNLLRIAL 278
LA + + + Y + + G V+ D K TME I + + ++ E R LL+ A
Sbjct: 128 LATSGTIKSNLYHKAFKKFGISVLAGDEKKTMEA--IYGEEGIKAGNLGEKPRRLLKEAA 185
Query: 279 QVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIK 323
Q L+ R +I ++ +L +D L +DP+ LA+ ++
Sbjct: 186 QELIRRGAQVIIAGCTEISLVLGEEDVSL-PLVDPLTILAKVAVE 229
>gi|317129519|ref|YP_004095801.1| aspartate racemase [Bacillus cellulosilyticus DSM 2522]
gi|315474467|gb|ADU31070.1| aspartate racemase [Bacillus cellulosilyticus DSM 2522]
Length = 236
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 73/174 (41%), Gaps = 23/174 (13%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNC 138
T+GI+GG +T++L K+V SG E D ++ ++P ++ S + +N
Sbjct: 7 TIGILGGMGPMATVDLFKKIVNESGAERDQDHHKIIIFNNP----KIPSRSEAILKGMNT 62
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
L + LE AGA I++PCH +H W E+ ++P +++ +
Sbjct: 63 A-----------FPQLLKSAKTLEAAGADFIIIPCHTAHYWFRELQDQLNIPIINMIDNT 111
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
+ L ++ +LA + + +Q + + V+P+ E
Sbjct: 112 VNYINS-----LTKNESQKVLILATRGTIYSKIFQNEFMIKRIPYVVPNSEEQE 160
>gi|423386270|ref|ZP_17363526.1| aspartate racemase [Bacillus cereus BAG1X1-2]
gi|423527398|ref|ZP_17503843.1| aspartate racemase [Bacillus cereus HuB1-1]
gi|401633700|gb|EJS51473.1| aspartate racemase [Bacillus cereus BAG1X1-2]
gi|402453073|gb|EJV84880.1| aspartate racemase [Bacillus cereus HuB1-1]
Length = 224
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 68/136 (50%), Gaps = 12/136 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE GA I MPC+ +H++ +E+ + S+P L++ + + + E N K R+ +
Sbjct: 70 LESTGASFIAMPCNTAHLYFEELQRSLSIPILNIVDETLQAIPE-NTK--------RVAL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQV 280
LA A + A YQ+ + + + +K + ++ + + ++E AR L AL +
Sbjct: 121 LATEATVQARIYQDGIAKRNIKYIHHEK--WQESINQIITCIKSGEIEEARELWN-ALVL 177
Query: 281 LLVRAVNTVILASDDM 296
L V+T I+A D+
Sbjct: 178 QLRDEVDTAIIACTDL 193
>gi|392309641|ref|ZP_10272175.1| aspartate racemase [Pseudoalteromonas citrea NCIMB 1889]
Length = 229
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 79/168 (47%), Gaps = 19/168 (11%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGG 141
T+G++GG S +ST + + Q G + L + +LN S D + ++ + G
Sbjct: 3 TIGLIGGMSWESTASYYRIINQ--GIKARLGGLHSAKIVLN----SVDFAEVEAMQ-QAG 55
Query: 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
QL L+ + R LE AGA+CI++ + H D++ S+P +H+++ A
Sbjct: 56 DWQLSADLLKGSARS----LEAAGAQCIMICTNTMHKVADDIAAAVSLPLIHIADATA-- 109
Query: 202 LKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
+ L A ++ +L ++ FY +L+ G +V++P A
Sbjct: 110 ------QVLIAKGVTKVALLGTRFTMSETFYTSRLEQRGVDVLVPTNA 151
>gi|423456991|ref|ZP_17433788.1| aspartate racemase [Bacillus cereus BAG5X2-1]
gi|401149210|gb|EJQ56686.1| aspartate racemase [Bacillus cereus BAG5X2-1]
Length = 224
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 93/223 (41%), Gaps = 40/223 (17%)
Query: 83 VGIVGGASVDSTL----NLLGKLVQLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST ++ K + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAKCQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE G I MPC+ +H++ +E+ + S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGVSFIAMPCNTAHLYFEELQRSISIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + + + E K + +LA A + AG YQ+ + + +K +
Sbjct: 103 IVDETLQAIPETAKK---------VALLATEATVQAGIYQDGIAKRNIGYIHHEK--WQE 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
+ + + +VE AR L AL V L V+T I+A D+
Sbjct: 152 MINHIITYIKNGEVEVARQLWS-ALVVQLKDEVDTAIIACTDL 193
>gi|313893945|ref|ZP_07827511.1| aspartate racemase [Veillonella sp. oral taxon 158 str. F0412]
gi|313441509|gb|EFR59935.1| aspartate racemase [Veillonella sp. oral taxon 158 str. F0412]
Length = 222
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LEKAGA IV+ + H DE+ + +P LH++E A EL+++ + ++G+
Sbjct: 62 LEKAGADYIVICTNTMHKVADEIERHIHIPLLHIAEMTAVELEKSGIT--------KVGL 113
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
L + FY+ L++ G VV+P++ +E
Sbjct: 114 LGTKYTMQQDFYKCILENRGIHVVIPNEDQVE 145
>gi|226357715|ref|YP_002787454.1| aspartate racemase [Deinococcus deserti VCD115]
gi|226319957|gb|ACO47950.1| putative aspartate racemase [Deinococcus deserti VCD115]
Length = 243
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 20/164 (12%)
Query: 77 LNQANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSL 136
+N+A VG++GG ++TL+ K+++ +G +D L LL +
Sbjct: 1 MNRA--VGVLGGMGPEATLDFFAKVLRRAGARSDQDHL---------RLLIDNNPGVPDR 49
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
N G ++ + R L+ +GA +VM C+ +H + +++ ++PF+ + E
Sbjct: 50 NAALSGRGESPGPVLAQMARG---LQASGADFLVMVCNTAHAFEEDILNATTLPFVSLIE 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEG 240
E ++A ++ E R+G+LA + L AG YQ G
Sbjct: 107 ----ETRDAALR--EQPGLQRVGLLATSTCLGAGLYQSAFAPYG 144
>gi|159044742|ref|YP_001533536.1| aspartate/glutamate racemase family protein [Dinoroseobacter shibae
DFL 12]
gi|157912502|gb|ABV93935.1| aspartate/glutamate racemase family protein [Dinoroseobacter shibae
DFL 12]
Length = 229
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 19/167 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+GI+GG S ST +L +L+ L S LL + L D + +L G
Sbjct: 2 KTIGILGGMSAASTQLYYSELCRLTRARLGG---LHSPQLLIRSL---DFAEIEALQAAG 55
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
+ L E LE+ GA +++ + H D + +G +P LH+++ A+
Sbjct: 56 AWTRAGTILNSEA-----QALERGGAGILLLATNTMHKLADRMMEGVGIPLLHIADATAQ 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD 247
+ +A ++ R G++A + FY +L+ G + VLPD
Sbjct: 111 AILQAGLR--------RPGLMATAFTMEQQFYTGRLRAAGLDPVLPD 149
>gi|85707890|ref|ZP_01038956.1| putative aspartate/glutamate racemase [Erythrobacter sp. NAP1]
gi|85689424|gb|EAQ29427.1| putative aspartate/glutamate racemase [Erythrobacter sp. NAP1]
Length = 236
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE AGA +++ + H +D+V G +P LH+++ V K LK A K +
Sbjct: 73 LEGAGAEALIIGANSMHKLYDDVSAGVDIPILHIADYVGKALKRAGHKTA--------AL 124
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
+ ++T FY+++L G +++ P+ +E
Sbjct: 125 IGTRNVMTESFYRKRLVAHGIDLLPPNMINVE 156
>gi|50120232|ref|YP_049399.1| aspartate/glutamate racemase [Pectobacterium atrosepticum SCRI1043]
gi|49610758|emb|CAG74203.1| putative aspartate/glutamate racemase [Pectobacterium atrosepticum
SCRI1043]
Length = 236
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 31/232 (13%)
Query: 80 ANTVGIVGGASVDSTL---NLLGKLV--QLSGEENDFPFLLCSDPLLNKELLSHDRSSFS 134
+ T+G++GG S +ST+ ++ + V QL G L S ++ L S D
Sbjct: 3 SKTLGLIGGMSWESTIPYYRIINEYVKSQLGG--------LHSAKII---LHSVDFHEIE 51
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
L +G Q + ++ N+ V L +AGA IV+ + H DEV + +P LH+
Sbjct: 52 QLQSQGDWEQA--AAVLGNIA---VGLRQAGADAIVICTNTMHKVADEVERASQLPLLHI 106
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEH 253
++ LK+ +K ++G+L + FY++++Q +V++PD+ E
Sbjct: 107 ADATGASLKQHGLK--------KVGLLGTRYTMEQDFYRQRIQERFSVDVIVPDQTGKEL 158
Query: 254 TLIPALDALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
D L ++ + +R + R +Q L + +IL ++ L+ D
Sbjct: 159 VNRIIYDELCLGNINDTSRQVYREIIQQLEQQGAEGIILGCTEIPLLIGAGD 210
>gi|402488484|ref|ZP_10835295.1| aspartate racemase [Rhizobium sp. CCGE 510]
gi|401812546|gb|EJT04897.1| aspartate racemase [Rhizobium sp. CCGE 510]
Length = 239
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 10/98 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE AGA C+++ + H+ ++V SVP +H+ + AK L A K PL +
Sbjct: 71 LEAAGAGCVLICTNTMHLIAEQVAAKISVPLIHIIDETAKSLHAAGRK-----RPL---L 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKA--TMEHTLI 256
LA + GFY ++++ G ++++PD A T H +I
Sbjct: 123 LATRYTMEHGFYGDRMKSLGLDILVPDAADRTTVHDII 160
>gi|341820422|emb|CCC56694.1| aspartate racemase [Weissella thailandensis fsh4-2]
Length = 247
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 99/243 (40%), Gaps = 23/243 (9%)
Query: 84 GIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGV 143
GI+GG +T N + + QL+ D +L D ++ DR+++ + K +
Sbjct: 22 GIIGGMGTVATENFVHTVNQLTETHKDQNYL---DYIVFNHASIPDRTAYIFDHTKPNPL 78
Query: 144 QLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELK 203
L S + + L G IVM C+ +H + E+ K P L + A +
Sbjct: 79 PLLQSDVEK--------LNDIGVSFIVMTCNTAHYFRSELQKASKAPILSMPNIAASACQ 130
Query: 204 EANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALN 263
+ K ++G++A + ++A YQ++L +G + V+PD + + D +
Sbjct: 131 TSTNKDS------KVGIMATDGTISAEIYQKELIDKGVQPVIPDAHHQQLVMSLIYDDIK 184
Query: 264 RKDV---EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARS 320
KD E L+ Q L +IL ++ + + ID + LA+
Sbjct: 185 NKDFVNREKYHQLITYFFQTL---DCEYIILGCTELSVAQEKEPYPSEYIIDAQNELAKY 241
Query: 321 TIK 323
+K
Sbjct: 242 VVK 244
>gi|158319598|ref|YP_001512105.1| aspartate racemase [Alkaliphilus oremlandii OhILAs]
gi|158139797|gb|ABW18109.1| aspartate racemase [Alkaliphilus oremlandii OhILAs]
Length = 234
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGG 141
T+GI+GG +T NL K+V + ++D + L++ + DR+++ G
Sbjct: 4 TLGIIGGMGPLATANLFNKIVLKTEAKSDQDHIHI---LIDNNIAIPDRTAY----LVGD 56
Query: 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
G D+ L E L + LE GA ++MPC+ +H ++ E+ ++ FL++ E
Sbjct: 57 G---DNPL--EELVKSAKRLENMGADFLIMPCNTAHYFYQEIKDVINIAFLNMIEETVMH 111
Query: 202 LKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDK 248
+KE + + ++G+LA + + + Y E E++ D+
Sbjct: 112 IKE------KYPTSKKVGLLATDGTVQSKIYDLYFNKENIEMINLDE 152
>gi|317053843|ref|YP_004117868.1| aspartate racemase [Pantoea sp. At-9b]
gi|316951838|gb|ADU71312.1| aspartate racemase [Pantoea sp. At-9b]
Length = 230
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 12/148 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE+ GA IV+ + H ++ ++P LH+++ A +++A +K R+G+
Sbjct: 71 LERGGADFIVLCTNTMHKLAAQITAAVNIPLLHIADATAARIRQAGVK--------RVGL 122
Query: 221 LAKNAILTAGFYQEKLQHE-GFEVVLP--DKATMEHTLIPALDALNRKDVEGARNLLRIA 277
LA + FY+ +LQ E G EV++P + + H +I L E +R R
Sbjct: 123 LATGFTMEQDFYKGRLQQEYGIEVLVPAATQRKVVHDIIYQELCLGIIR-EESRAHYREI 181
Query: 278 LQVLLVRAVNTVILASDDMQDLLPPDDP 305
+ L+ +IL ++ L+ P+D
Sbjct: 182 IAQLVAEGAEAIILGCTEITLLVKPEDA 209
>gi|153947122|ref|YP_001400391.1| aspartate racemase family protein [Yersinia pseudotuberculosis IP
31758]
gi|152958617|gb|ABS46078.1| aspartate racemase family protein [Yersinia pseudotuberculosis IP
31758]
Length = 230
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 102/235 (43%), Gaps = 41/235 (17%)
Query: 83 VGIVGGASVDSTL---NLLGKLV--QLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLN 137
+G++GG S +ST+ ++ + V QL G L S ++ L S D L
Sbjct: 4 LGLIGGMSWESTIPYYRMINQHVKAQLGG--------LHSAKII---LYSVDFHEIEQLQ 52
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
KG D + L + L+ AGA IV+ + H D++ C +P LH+++
Sbjct: 53 AKG-----DWQTAAQLLSNAAISLKHAGAEVIVVCTNTMHKVADDIEAACGLPLLHIADA 107
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKL-QHEGFEVVLPDKATMEHTLI 256
A ++K+ + +IG+L + FY+ +L + G EV+ PD E
Sbjct: 108 TAVQIKQQGID--------KIGLLGTRYTMEQDFYRGRLTEKHGIEVITPDDTDRE---- 155
Query: 257 PALDALNRKDV------EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDP 305
A++ + +++ E +R+ R ++ L + V +I ++ L+ D
Sbjct: 156 -AVNRIIYEELCLGIISETSRDAYRRVIKKLEAQGVQGIIFGCTEITLLVNAQDA 209
>gi|93004852|ref|YP_579289.1| aspartate racemase [Psychrobacter cryohalolentis K5]
gi|92392530|gb|ABE73805.1| Aspartate racemase [Psychrobacter cryohalolentis K5]
Length = 239
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 82/171 (47%), Gaps = 19/171 (11%)
Query: 77 LNQANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSL 136
+ + T+GI+GG S +ST + +L+ G + L +D L++ S D + L
Sbjct: 3 VQKQRTLGIIGGMSWESTQSYY-RLIN-EGIKAKLGNLHSADLLIH----SVDFAPIGEL 56
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+G +L D ++ R L+ AGA+ +++ + H ++V ++P +H+++
Sbjct: 57 QAQGKWEELGDIMVNSGKR-----LQAAGAQGLLIATNTMHKVAEQVQVATNLPLIHIAD 111
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD 247
A +K+ + +I +L +T FY++ L G +V++PD
Sbjct: 112 TTADAIKQQGLT--------KIALLGTQFTMTEDFYKQCLMDAGLQVLIPD 154
>gi|139437255|ref|ZP_01771415.1| Hypothetical protein COLAER_00394 [Collinsella aerofaciens ATCC
25986]
gi|133776902|gb|EBA40722.1| aspartate racemase [Collinsella aerofaciens ATCC 25986]
Length = 276
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 105/260 (40%), Gaps = 44/260 (16%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
+G++GG ++T ++V+ + C ++ +LS +L K G
Sbjct: 32 LGVIGGMGAEATSYYYDQVVRHTA-------AACDQEHIDMVVLSKSTMPDRTLAIKTG- 83
Query: 143 VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV-SECVAKE 201
+ + ++ ++ LE G I +PC+ SH ++D++ VP +H+ E V
Sbjct: 84 ---EHAKLLATMKECAQALESLGCAHIAIPCNTSHYFYDQIQSFTKVPIIHMPRESVRYA 140
Query: 202 LKEANMKPLE-------AGSPL-RIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
L A M E P+ +IG++ + + AG Y + + G EVV P +
Sbjct: 141 LAGAVMGECEFDPNLSMPAEPVHKIGIMGTDGTVGAGVYGRECKAAGVEVVYPSEKRQND 200
Query: 254 TLI-----------PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPP 302
+ P +D +R E AR+ + VILA ++ +L
Sbjct: 201 VMSLIYDDVKAGREPDMDKFDRVMWEFARS------------GCDRVILACTELS-VLQK 247
Query: 303 DDPLLKKCIDPMDALARSTI 322
+ + +D MD L R +I
Sbjct: 248 YREMPEITLDAMDVLVRESI 267
>gi|323484480|ref|ZP_08089846.1| aspartate racemase [Clostridium symbiosum WAL-14163]
gi|323692541|ref|ZP_08106774.1| aspartate racemase [Clostridium symbiosum WAL-14673]
gi|323402258|gb|EGA94590.1| aspartate racemase [Clostridium symbiosum WAL-14163]
gi|323503407|gb|EGB19236.1| aspartate racemase [Clostridium symbiosum WAL-14673]
Length = 225
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 152 ENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLE 211
E L V LEKAGA +V+ + H ++ +P +H++E A LKE+ ++
Sbjct: 57 EVLSEAAVNLEKAGADYLVICTNTMHKVVPQIQTHIQIPIIHIAEATADVLKESRIR--- 113
Query: 212 AGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
++ +L +T FY++KL G EV++P++ +E
Sbjct: 114 -----KVALLGTKYTMTQDFYKKKLTDAGIEVLIPEQPDIE 149
>gi|378582435|ref|ZP_09831074.1| amino acid racemase [Pantoea stewartii subsp. stewartii DC283]
gi|377815172|gb|EHT98288.1| amino acid racemase [Pantoea stewartii subsp. stewartii DC283]
Length = 236
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 145 LDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCS-VPFLHVSECVAKELK 203
++D+ + LR L KAG I +PC+++H + E+ + + +P LH+++C + L
Sbjct: 57 VEDAAMSAALRDGISDLVKAGVNLIAVPCNVAHCYFAEMQEASAGIPVLHIADCALEHL- 115
Query: 204 EANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD 247
P E + I V+A + L AGFYQ++L G V D
Sbjct: 116 -----PAETEN---IAVIATASTLDAGFYQQRLHIAGKRCVSSD 151
>gi|229817369|ref|ZP_04447651.1| hypothetical protein BIFANG_02631 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
gi|229785158|gb|EEP21272.1| hypothetical protein BIFANG_02631 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
Length = 241
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 9/109 (8%)
Query: 165 GARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKN 224
GA IV+ C+ +H +HD VP LH+ K L + + P AG R+G L
Sbjct: 77 GASFIVLTCNTAHYFHDRFQALTDVPILHMPREAVKRLSQ--LYP--AGRTTRVGFLGTV 132
Query: 225 AILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNL 273
+G Y+ ++ G+ V PD A L + +L DV+G+ L
Sbjct: 133 GSRASGVYKHAVEEAGYTFVEPDDA-----LQARITSLIYDDVKGSGEL 176
>gi|218463300|ref|ZP_03503391.1| aspartate racemase [Rhizobium etli Kim 5]
Length = 261
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
L+ AGA CI++ + H+ D+V SVP +H+ + AK L A K PL +
Sbjct: 93 LQAAGAGCILICTNTMHLIADKVAAKISVPLIHIIDETAKSLHAAGRK-----RPL---L 144
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKA--TMEHTLI 256
LA + GFY ++++ G +V++PD T H +I
Sbjct: 145 LATRYTMEHGFYTDRMKSLGLDVMVPDATDRTTVHDII 182
>gi|405378832|ref|ZP_11032743.1| aspartate racemase [Rhizobium sp. CF142]
gi|397324642|gb|EJJ28996.1| aspartate racemase [Rhizobium sp. CF142]
Length = 240
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 72/146 (49%), Gaps = 13/146 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
L+ AGA C+++ + H+ EV SVP +H+ + AK + EA K PL +
Sbjct: 71 LQIAGAHCVLICTNTMHLIAPEVSSHISVPLIHIIDETAKTIHEAGCK-----RPL---L 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEHTLIPALDALNRKDVEGARNLLRIA 277
LA + GFY ++++ G ++++P D+ T+ + L A K ++ +R L
Sbjct: 123 LATRYTMEHGFYTDRMKGLGLDIMVPEAADRTTVHDIIFNELCA--GKVLDSSRQKLMAV 180
Query: 278 LQVLLVRAVNTVILASDDMQDLLPPD 303
++ +++IL ++ +L PD
Sbjct: 181 IERARANGADSIILGCTEICLILNPD 206
>gi|167586722|ref|ZP_02379110.1| aspartate racemase [Burkholderia ubonensis Bu]
Length = 230
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 11/162 (6%)
Query: 165 GARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKN 224
GA IV+ + H HD + ++PFLH+++ K L A + R+G+L
Sbjct: 75 GADLIVLTTNTMHRVHDSIEAAVALPFLHIADPTGKALLSAGLS--------RVGLLGTR 126
Query: 225 AILTAGFYQEKLQHE-GFEVVLPDKATMEHTLIPALDALNRKDVE-GARNLLRIALQVLL 282
+ FY E+L+ + G +V++PD+ + D L V+ G+R ++ L
Sbjct: 127 YTMELPFYAERLREKFGLDVLVPDERERDDVHRIIYDELCHGVVDAGSRATYARIIEGLA 186
Query: 283 VRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIKW 324
R VIL ++ L+ +D L D A++ ++W
Sbjct: 187 KRGAQAVILGCTEITLLIGAEDSPL-PVFDTTALHAQAAVEW 227
>gi|114284|sp|P29079.1|RACD_ENTFC RecName: Full=Aspartate racemase
gi|47644|emb|CAA43598.1| aspartate racemase [Streptococcus thermophilus]
Length = 243
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 169 IVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILT 228
IV+ C+ +H + +E+ +P LH+ A EL + + R+ +L +
Sbjct: 80 IVLTCNTAHYFFEELQAATDIPILHMPREAANEL-------VRQHTTGRVAILGTEGSMK 132
Query: 229 AGFYQEKLQHEGFEVVLPDKATME 252
AG Y+ ++++ GFE V+PD A E
Sbjct: 133 AGIYEREVKNLGFETVIPDTALQE 156
>gi|392958948|ref|ZP_10324445.1| aspartate racemase [Bacillus macauensis ZFHKF-1]
gi|391875093|gb|EIT83716.1| aspartate racemase [Bacillus macauensis ZFHKF-1]
Length = 231
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 74/155 (47%), Gaps = 11/155 (7%)
Query: 152 ENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLE 211
E L ++ LE+AGA +++ + H + + S+PFLH++E A +++A++
Sbjct: 62 ELLGKQAAALEQAGADFLIICTNTMHSVIPTIKRFVSLPFLHIAEATATRIQQASLS--- 118
Query: 212 AGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME--HTLIPALDALNRKDVEG 269
++G+L + FY K++ G EV++P + + H +I L + V+
Sbjct: 119 -----KVGLLGTRYTMEQDFYSAKIEEAGIEVMIPSEQERQDVHRIIYEELCLGHQ-VDS 172
Query: 270 ARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
+R + ++ L R +IL ++ L+ D
Sbjct: 173 SRARYQEIIRSLQARGAEGIILGCTEIGLLISESD 207
>gi|425054596|ref|ZP_18458101.1| aspartate racemase [Enterococcus faecium 505]
gi|403035548|gb|EJY46934.1| aspartate racemase [Enterococcus faecium 505]
Length = 243
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 169 IVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILT 228
IV+ C+ +H + +E+ +P LH+ A EL + + R+ +L +
Sbjct: 80 IVLTCNTAHYFFEELQAATDIPILHMPREAANEL-------VRQHTTGRVAILGTEGSMK 132
Query: 229 AGFYQEKLQHEGFEVVLPDKATME 252
AG Y+ ++++ GFE V+PD A E
Sbjct: 133 AGIYEREVKNLGFETVIPDTALQE 156
>gi|385210165|ref|ZP_10037033.1| aspartate racemase [Burkholderia sp. Ch1-1]
gi|385182503|gb|EIF31779.1| aspartate racemase [Burkholderia sp. Ch1-1]
Length = 503
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 26/173 (15%)
Query: 77 LNQANTVGIVGGASVDSTLNLLGKLV---QLSGEENDFPFLLCSDPLLNKELLSHDRSSF 133
+N+ ++G+V GA+ ++ ++L ++ Q G F LL +R S+
Sbjct: 1 MNRYRSLGVVTGAAQFASADVLCRMSAAWQRRGAARPFDLLL-------------ERQSW 47
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
+ ++D + R F EK G IV+PC LSH + DE+ +VP +
Sbjct: 48 QGPASQR---EVDAQFKIHVFDTMRAF-EKRGVEAIVLPCFLSHTFIDELSANVAVPVAN 103
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
+ ++ ++ A S RIGVL +AI G ++ F+V+ P
Sbjct: 104 IMTALSAYVRRAFP------SVRRIGVLTSDAIRDNGLFERYFDAAQFDVLHP 150
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 110/255 (43%), Gaps = 36/255 (14%)
Query: 83 VGIVGGASVDSTLNLLGKLVQ---LSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
VG++GG +T++ + KLV+ + +++ ++ +P + DR++ N +
Sbjct: 243 VGVLGGVGPAATVDFMAKLVRNTPAACDQDHIKIMVEQNPQIP------DRTAALLGNGE 296
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
D +L + R LE GA I +PC+ +H + + + +P +++ C A
Sbjct: 297 ------DPTLALYAACRT---LEDGGADLIAIPCNTAHAFVERIQPSLGIPIVNMLTCTA 347
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD---KATMEHTLI 256
L+E E +GVLA L + Y++ L+ GF + P +A + H +
Sbjct: 348 DYLRETFPGLRE------VGVLATTGTLASRVYEQSLEARGFVQIAPGEQAQARLMHAVY 401
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-------K 309
A + L A+ L+ + V ++L ++ LL D +L +
Sbjct: 402 GPKGAKAGFTSGECCDDLAAAVDDLIAQGVQVIVLGCTELPLLL--RDAMLACAAGRVVR 459
Query: 310 CIDPMDALARSTIKW 324
+DP + LA+ + +
Sbjct: 460 LVDPTEVLAKRCVAY 474
>gi|418528619|ref|ZP_13094567.1| aspartate racemase [Comamonas testosteroni ATCC 11996]
gi|371454373|gb|EHN67377.1| aspartate racemase [Comamonas testosteroni ATCC 11996]
Length = 242
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 74/150 (49%), Gaps = 14/150 (9%)
Query: 162 EKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVL 221
+ GA C+++ + H D+V S+PFLH+++ V + A ++ L G+L
Sbjct: 83 QAGGADCVLLCTNTMHKVADQVAAAVSIPFLHIADPVGAAARAAGVQVL--------GLL 134
Query: 222 AKNAILTAGFYQEKLQHE-GFEVVLPDKA--TMEHTLI-PALDALNRKDVEGARNLLRIA 277
+ F +E+L+ + G +V++PD+A T H +I L DV +R L + A
Sbjct: 135 GTRFTMEQPFMRERLEQQFGLKVLVPDEAERTQVHRIIYEELCVGQISDV--SRKLYQRA 192
Query: 278 LQVLLVRAVNTVILASDDMQDLLPPDDPLL 307
++ L R V+L ++ L+ +D +L
Sbjct: 193 IESLAARGAQAVVLGCTEIGLLIKSEDSVL 222
>gi|398851924|ref|ZP_10608598.1| aspartate racemase [Pseudomonas sp. GM80]
gi|398245633|gb|EJN31148.1| aspartate racemase [Pseudomonas sp. GM80]
Length = 230
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 101/246 (41%), Gaps = 53/246 (21%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +S+ +L+ + PL + +LL + F +
Sbjct: 2 RTIGLIGGMSWESSAEYY-RLINQQVRDR-------LGPLRSAQLLMYS-VDFGPVEQAQ 52
Query: 141 GGVQLDDS--LIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
+ DD+ ++V+ RR L+ GA C+V+ + H +++ ++PFLH++E
Sbjct: 53 HAGRWDDAAAILVDAARR----LQAGGAECVVLCTNTMHKVAEQIQAAIAIPFLHIAEPA 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPA 258
A+ + + +G+L + F +++L G V++PD A
Sbjct: 109 AQAALDIEART--------VGLLGTAFTMEQDFLKQRLIARGLTVLIPDDA--------- 151
Query: 259 LDALNRKDV--------------EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
R+DV E +R R ++ L R +IL ++ L+ P+
Sbjct: 152 ----ERRDVHRIIYEELCVGVISETSRQTYRQVIESLTARGAQAIILGCTEIGLLIKPEH 207
Query: 305 ---PLL 307
PLL
Sbjct: 208 SAVPLL 213
>gi|389853054|ref|YP_006355288.1| aspartate racemase [Pyrococcus sp. ST04]
gi|388250360|gb|AFK23213.1| aspartate racemase [Pyrococcus sp. ST04]
Length = 227
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 21/164 (12%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
+GI+GG + +ST K +++S E+ + + EL+ + +F G
Sbjct: 4 IGIIGGTTPESTCYYYRKYIEISREK--------FEKYVYPELIIYS-INFKEFFENPEG 54
Query: 143 VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKEL 202
+ +++ + LE+AGA I + HI D+V K +VP + + + VA+E+
Sbjct: 55 WEGRKKILINAAKA----LERAGAELIAFSANTPHIVFDDVQKEVNVPMVSIIDAVAEEV 110
Query: 203 KEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
+K ++ +L ++A FY L+ +G EVV+P
Sbjct: 111 LRRGVK--------KVLLLGTKTTMSADFYINALKDKGLEVVVP 146
>gi|425042143|ref|ZP_18446501.1| aspartate racemase [Enterococcus faecium 511]
gi|403024183|gb|EJY36359.1| aspartate racemase [Enterococcus faecium 511]
Length = 243
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 169 IVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILT 228
IV+ C+ +H + +E+ +P LH+ A EL + + R+ +L +
Sbjct: 80 IVLTCNTAHYFFEELQAATDIPILHMPREAANEL-------VRQHTTGRVAILGTEGSMK 132
Query: 229 AGFYQEKLQHEGFEVVLPDKATME 252
AG Y+ ++++ GFE V+PD A E
Sbjct: 133 AGIYEREVKNLGFETVIPDTALQE 156
>gi|388469904|ref|ZP_10144113.1| aspartate racemase [Pseudomonas synxantha BG33R]
gi|388006601|gb|EIK67867.1| aspartate racemase [Pseudomonas synxantha BG33R]
Length = 230
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 100/231 (43%), Gaps = 23/231 (9%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +S+ + Q ++ PL + ++L + +
Sbjct: 2 RTIGLIGGMSWESSAEYYRLINQRVRDQ--------LGPLRSAQILLYSVDFGPVEQAQH 53
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
G D +LI+E+ R+ L+ GA C+V+ + H+ + S+PFLH+++ A
Sbjct: 54 AGRWDDTALILEDAARR---LQAGGAECVVLCTNTMHLVAPRIEAAVSIPFLHIADATAA 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALD 260
EA L++G+L + F + +L +G V++PD + +
Sbjct: 111 AALEAG--------TLKVGLLGTGFTMEQDFLKSRLAAQGLTVLIPDADERKQVHRIIYE 162
Query: 261 ALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD---PLL 307
L + + +R + + +Q L R VIL ++ L+ P+ PLL
Sbjct: 163 ELCVGVISDASRQVYQRVIQALAARGAQAVILGCTEICLLIQPEHSALPLL 213
>gi|228988009|ref|ZP_04148113.1| amino-acid racemase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|228771726|gb|EEM20188.1| amino-acid racemase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 224
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 18/163 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE G + MPC+ +H++ +E+ + SVP L++ + + + E N K R+ +
Sbjct: 70 LESTGVEFLAMPCNTAHLYFEELQRSLSVPILNIVDETLQAIPE-NTK--------RVAL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQV 280
LA A + AG YQ+ + E + +K + ++ + + +E A L + L +
Sbjct: 121 LATEATVQAGIYQDGIIKRNIEYIHHEK--WQESINQIISCIKGGKIEKAHELWNV-LVL 177
Query: 281 LLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIK 323
L V+T I+A D+ + D +D LA++ +K
Sbjct: 178 QLRDEVDTAIIACTDLNVVASED------FVDSAQCLAKAVVK 214
>gi|257878492|ref|ZP_05658145.1| aspartate racemase [Enterococcus faecium 1,230,933]
gi|257882913|ref|ZP_05662566.1| aspartate racemase [Enterococcus faecium 1,231,502]
gi|257884377|ref|ZP_05664030.1| aspartate racemase [Enterococcus faecium 1,231,501]
gi|257889308|ref|ZP_05668961.1| aspartate racemase [Enterococcus faecium 1,231,410]
gi|257894321|ref|ZP_05673974.1| aspartate racemase [Enterococcus faecium 1,231,408]
gi|260560081|ref|ZP_05832259.1| aspartate racemase [Enterococcus faecium C68]
gi|261207431|ref|ZP_05922117.1| aspartate racemase [Enterococcus faecium TC 6]
gi|289566469|ref|ZP_06446894.1| aspartate racemase [Enterococcus faecium D344SRF]
gi|293560166|ref|ZP_06676668.1| aspartate racemase [Enterococcus faecium E1162]
gi|294621572|ref|ZP_06700738.1| aspartate racemase [Enterococcus faecium U0317]
gi|314939955|ref|ZP_07847155.1| aspartate racemase [Enterococcus faecium TX0133a04]
gi|314942564|ref|ZP_07849398.1| aspartate racemase [Enterococcus faecium TX0133C]
gi|314947462|ref|ZP_07850877.1| aspartate racemase [Enterococcus faecium TX0082]
gi|314952486|ref|ZP_07855487.1| aspartate racemase [Enterococcus faecium TX0133A]
gi|314992417|ref|ZP_07857843.1| aspartate racemase [Enterococcus faecium TX0133B]
gi|314996257|ref|ZP_07861316.1| aspartate racemase [Enterococcus faecium TX0133a01]
gi|383329007|ref|YP_005354891.1| Aspartate racemase [Enterococcus faecium Aus0004]
gi|389868825|ref|YP_006376248.1| aspartate racemase [Enterococcus faecium DO]
gi|424781148|ref|ZP_18208009.1| aspartate racemase [Enterococcus faecium V689]
gi|424797103|ref|ZP_18222743.1| aspartate racemase [Enterococcus faecium S447]
gi|424834652|ref|ZP_18259349.1| aspartate racemase [Enterococcus faecium R501]
gi|424856433|ref|ZP_18280658.1| aspartate racemase [Enterococcus faecium R499]
gi|424884119|ref|ZP_18307744.1| aspartate racemase [Enterococcus faecium R497]
gi|424945046|ref|ZP_18360800.1| aspartate racemase [Enterococcus faecium R496]
gi|424954304|ref|ZP_18369209.1| aspartate racemase [Enterococcus faecium R494]
gi|424956054|ref|ZP_18370852.1| aspartate racemase [Enterococcus faecium R446]
gi|424960876|ref|ZP_18375353.1| aspartate racemase [Enterococcus faecium P1986]
gi|424963843|ref|ZP_18377994.1| aspartate racemase [Enterococcus faecium P1190]
gi|424966747|ref|ZP_18380504.1| aspartate racemase [Enterococcus faecium P1140]
gi|424970406|ref|ZP_18383924.1| aspartate racemase [Enterococcus faecium P1139]
gi|424975065|ref|ZP_18388255.1| aspartate racemase [Enterococcus faecium P1137]
gi|424976621|ref|ZP_18389696.1| aspartate racemase [Enterococcus faecium P1123]
gi|424980857|ref|ZP_18393622.1| aspartate racemase [Enterococcus faecium ERV99]
gi|424983785|ref|ZP_18396358.1| aspartate racemase [Enterococcus faecium ERV69]
gi|424988567|ref|ZP_18400879.1| aspartate racemase [Enterococcus faecium ERV38]
gi|424992676|ref|ZP_18404724.1| aspartate racemase [Enterococcus faecium ERV26]
gi|424993425|ref|ZP_18405417.1| aspartate racemase [Enterococcus faecium ERV168]
gi|424998396|ref|ZP_18410085.1| aspartate racemase [Enterococcus faecium ERV165]
gi|424999923|ref|ZP_18411515.1| aspartate racemase [Enterococcus faecium ERV161]
gi|425004594|ref|ZP_18415893.1| aspartate racemase [Enterococcus faecium ERV102]
gi|425007634|ref|ZP_18418755.1| aspartate racemase [Enterococcus faecium ERV1]
gi|425010413|ref|ZP_18421367.1| aspartate racemase [Enterococcus faecium E422]
gi|425013821|ref|ZP_18424529.1| aspartate racemase [Enterococcus faecium E417]
gi|425018303|ref|ZP_18428757.1| aspartate racemase [Enterococcus faecium C621]
gi|425021128|ref|ZP_18431406.1| aspartate racemase [Enterococcus faecium C497]
gi|425023181|ref|ZP_18433315.1| aspartate racemase [Enterococcus faecium C1904]
gi|425030834|ref|ZP_18435994.1| aspartate racemase [Enterococcus faecium 515]
gi|425036177|ref|ZP_18440962.1| aspartate racemase [Enterococcus faecium 514]
gi|425037509|ref|ZP_18442173.1| aspartate racemase [Enterococcus faecium 513]
gi|425045350|ref|ZP_18449459.1| aspartate racemase [Enterococcus faecium 510]
gi|425049260|ref|ZP_18453122.1| aspartate racemase [Enterococcus faecium 509]
gi|425051667|ref|ZP_18455323.1| aspartate racemase [Enterococcus faecium 506]
gi|425060125|ref|ZP_18463429.1| aspartate racemase [Enterococcus faecium 503]
gi|430830778|ref|ZP_19448834.1| aspartate racemase [Enterococcus faecium E0333]
gi|430843967|ref|ZP_19461865.1| aspartate racemase [Enterococcus faecium E1050]
gi|430845966|ref|ZP_19463831.1| aspartate racemase [Enterococcus faecium E1133]
gi|430851739|ref|ZP_19469474.1| aspartate racemase [Enterococcus faecium E1258]
gi|430854888|ref|ZP_19472600.1| aspartate racemase [Enterococcus faecium E1392]
gi|431370207|ref|ZP_19509906.1| aspartate racemase [Enterococcus faecium E1627]
gi|431541974|ref|ZP_19518203.1| aspartate racemase [Enterococcus faecium E1731]
gi|431750044|ref|ZP_19538771.1| aspartate racemase [Enterococcus faecium E2297]
gi|431754890|ref|ZP_19543550.1| aspartate racemase [Enterococcus faecium E2883]
gi|431767267|ref|ZP_19555721.1| aspartate racemase [Enterococcus faecium E1321]
gi|431770891|ref|ZP_19559286.1| aspartate racemase [Enterococcus faecium E1644]
gi|431772345|ref|ZP_19560686.1| aspartate racemase [Enterococcus faecium E2369]
gi|431775710|ref|ZP_19563981.1| aspartate racemase [Enterococcus faecium E2560]
gi|431778857|ref|ZP_19567062.1| aspartate racemase [Enterococcus faecium E4389]
gi|403399530|sp|H8L901.1|RACD_ENTFU RecName: Full=Aspartate racemase; AltName: Full=Rac(fm)
gi|257812720|gb|EEV41478.1| aspartate racemase [Enterococcus faecium 1,230,933]
gi|257818571|gb|EEV45899.1| aspartate racemase [Enterococcus faecium 1,231,502]
gi|257820215|gb|EEV47363.1| aspartate racemase [Enterococcus faecium 1,231,501]
gi|257825668|gb|EEV52294.1| aspartate racemase [Enterococcus faecium 1,231,410]
gi|257830700|gb|EEV57307.1| aspartate racemase [Enterococcus faecium 1,231,408]
gi|260073916|gb|EEW62240.1| aspartate racemase [Enterococcus faecium C68]
gi|260078322|gb|EEW66027.1| aspartate racemase [Enterococcus faecium TC 6]
gi|289161734|gb|EFD09609.1| aspartate racemase [Enterococcus faecium D344SRF]
gi|291598877|gb|EFF29928.1| aspartate racemase [Enterococcus faecium U0317]
gi|291605838|gb|EFF35270.1| aspartate racemase [Enterococcus faecium E1162]
gi|313589579|gb|EFR68424.1| aspartate racemase [Enterococcus faecium TX0133a01]
gi|313593052|gb|EFR71897.1| aspartate racemase [Enterococcus faecium TX0133B]
gi|313595392|gb|EFR74237.1| aspartate racemase [Enterococcus faecium TX0133A]
gi|313598668|gb|EFR77513.1| aspartate racemase [Enterococcus faecium TX0133C]
gi|313640789|gb|EFS05369.1| aspartate racemase [Enterococcus faecium TX0133a04]
gi|313646012|gb|EFS10592.1| aspartate racemase [Enterococcus faecium TX0082]
gi|378938701|gb|AFC63773.1| Aspartate racemase [Enterococcus faecium Aus0004]
gi|388534074|gb|AFK59266.1| aspartate racemase [Enterococcus faecium DO]
gi|402921907|gb|EJX42324.1| aspartate racemase [Enterococcus faecium S447]
gi|402921986|gb|EJX42393.1| aspartate racemase [Enterococcus faecium R501]
gi|402924295|gb|EJX44509.1| aspartate racemase [Enterococcus faecium V689]
gi|402929956|gb|EJX49666.1| aspartate racemase [Enterococcus faecium R499]
gi|402933859|gb|EJX53264.1| aspartate racemase [Enterococcus faecium R497]
gi|402935844|gb|EJX55056.1| aspartate racemase [Enterococcus faecium R496]
gi|402937183|gb|EJX56315.1| aspartate racemase [Enterococcus faecium R494]
gi|402945571|gb|EJX63910.1| aspartate racemase [Enterococcus faecium P1986]
gi|402946786|gb|EJX65036.1| aspartate racemase [Enterococcus faecium R446]
gi|402948025|gb|EJX66196.1| aspartate racemase [Enterococcus faecium P1190]
gi|402954807|gb|EJX72393.1| aspartate racemase [Enterococcus faecium P1137]
gi|402955842|gb|EJX73342.1| aspartate racemase [Enterococcus faecium P1140]
gi|402961969|gb|EJX78955.1| aspartate racemase [Enterococcus faecium P1139]
gi|402965212|gb|EJX81940.1| aspartate racemase [Enterococcus faecium ERV99]
gi|402968994|gb|EJX85439.1| aspartate racemase [Enterococcus faecium P1123]
gi|402970695|gb|EJX87013.1| aspartate racemase [Enterococcus faecium ERV69]
gi|402971589|gb|EJX87853.1| aspartate racemase [Enterococcus faecium ERV38]
gi|402972411|gb|EJX88617.1| aspartate racemase [Enterococcus faecium ERV26]
gi|402982495|gb|EJX97956.1| aspartate racemase [Enterococcus faecium ERV168]
gi|402983292|gb|EJX98703.1| aspartate racemase [Enterococcus faecium ERV165]
gi|402989075|gb|EJY04032.1| aspartate racemase [Enterococcus faecium ERV102]
gi|402990318|gb|EJY05192.1| aspartate racemase [Enterococcus faecium ERV161]
gi|402994665|gb|EJY09185.1| aspartate racemase [Enterococcus faecium ERV1]
gi|403000076|gb|EJY14227.1| aspartate racemase [Enterococcus faecium E422]
gi|403000145|gb|EJY14290.1| aspartate racemase [Enterococcus faecium E417]
gi|403002457|gb|EJY16430.1| aspartate racemase [Enterococcus faecium C621]
gi|403007715|gb|EJY21266.1| aspartate racemase [Enterococcus faecium C497]
gi|403010549|gb|EJY23919.1| aspartate racemase [Enterococcus faecium C1904]
gi|403015630|gb|EJY28508.1| aspartate racemase [Enterococcus faecium 514]
gi|403016948|gb|EJY29733.1| aspartate racemase [Enterococcus faecium 515]
gi|403021873|gb|EJY34292.1| aspartate racemase [Enterococcus faecium 513]
gi|403027225|gb|EJY39124.1| aspartate racemase [Enterococcus faecium 510]
gi|403028463|gb|EJY40285.1| aspartate racemase [Enterococcus faecium 509]
gi|403037170|gb|EJY48479.1| aspartate racemase [Enterococcus faecium 506]
gi|403042899|gb|EJY53835.1| aspartate racemase [Enterococcus faecium 503]
gi|430482367|gb|ELA59485.1| aspartate racemase [Enterococcus faecium E0333]
gi|430496557|gb|ELA72616.1| aspartate racemase [Enterococcus faecium E1050]
gi|430539786|gb|ELA80025.1| aspartate racemase [Enterococcus faecium E1133]
gi|430542321|gb|ELA82429.1| aspartate racemase [Enterococcus faecium E1258]
gi|430547767|gb|ELA87683.1| aspartate racemase [Enterococcus faecium E1392]
gi|430583954|gb|ELB22312.1| aspartate racemase [Enterococcus faecium E1627]
gi|430593021|gb|ELB31008.1| aspartate racemase [Enterococcus faecium E1731]
gi|430610517|gb|ELB47661.1| aspartate racemase [Enterococcus faecium E2297]
gi|430618718|gb|ELB55559.1| aspartate racemase [Enterococcus faecium E2883]
gi|430631071|gb|ELB67401.1| aspartate racemase [Enterococcus faecium E1321]
gi|430634456|gb|ELB70579.1| aspartate racemase [Enterococcus faecium E1644]
gi|430638033|gb|ELB74014.1| aspartate racemase [Enterococcus faecium E2369]
gi|430642557|gb|ELB78331.1| aspartate racemase [Enterococcus faecium E2560]
gi|430643338|gb|ELB79082.1| aspartate racemase [Enterococcus faecium E4389]
Length = 243
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 169 IVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILT 228
IV+ C+ +H + +E+ +P LH+ A EL + + R+ +L +
Sbjct: 80 IVLTCNTAHYFFEELQAATDIPILHMPREAANEL-------VRQHTTGRVAILGTEGSMK 132
Query: 229 AGFYQEKLQHEGFEVVLPDKATME 252
AG Y+ ++++ GFE V+PD A E
Sbjct: 133 AGIYEREVKNLGFETVIPDTALQE 156
>gi|149202517|ref|ZP_01879489.1| aspartate racemase [Roseovarius sp. TM1035]
gi|149143799|gb|EDM31833.1| aspartate racemase [Roseovarius sp. TM1035]
Length = 226
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 71/169 (42%), Gaps = 22/169 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSS-LNCK 139
TVGI+GG ++T+ L+ KL+ +D SD + L+ H S S +
Sbjct: 2 RTVGILGGMGPEATVLLMQKLLAAVPARDD------SD---HIPLIVHQNSQVPSRIKAL 52
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G D + L R L+ AGA + MPC+ +H + V +PFL++ + A
Sbjct: 53 IEGTGEDPGPV---LARMACDLQAAGAEALAMPCNTAHHYAPAVVAATPLPFLNMLDLTA 109
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFE-VVLPD 247
+ L + R+G+LA A A + G V LPD
Sbjct: 110 QSLARQGAR--------RVGMLASPATRLANVFAAPFAAHGLTPVFLPD 150
>gi|378823522|ref|ZP_09846145.1| aspartate racemase [Sutterella parvirubra YIT 11816]
gi|378597646|gb|EHY30911.1| aspartate racemase [Sutterella parvirubra YIT 11816]
Length = 475
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 111/265 (41%), Gaps = 41/265 (15%)
Query: 75 ALLNQANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFS 134
A L + VG++GG +T++L K+V+ + + D + K ++ + +
Sbjct: 225 ARLGKPFKVGLIGGLGPAATVDLYDKIVKATPAKTDQEHI--------KLVVEQNPQTPD 276
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
C G Q DD L + LE G +++PC+ +H + V + S+P +++
Sbjct: 277 RTACLLG--QGDDPTFA--LYGMAMKLEADGCDAVIVPCNTAHAFMPFVERHLSIPCINM 332
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHT 254
+ +E++ + G RIG+LA + + Y EK + G + +PD+ +
Sbjct: 333 QKAALEEIQA------KLGKDARIGLLATRGTVQSRIYAEKAEAMGLPMFVPDEERQDRV 386
Query: 255 LIPAL----------DALNRKD-VEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPD 303
+ D + R D + G L+R N +IL ++ +L
Sbjct: 387 MAAIYGPEGAKAGFTDGVCRDDLMSGVEYLVR-------TYDCNCLILGCTELPLILDES 439
Query: 304 D--PLLKKC---IDPMDALARSTIK 323
D P+ K IDP ALAR +K
Sbjct: 440 DAFPVAGKSVMMIDPTAALARKVVK 464
>gi|423612937|ref|ZP_17588798.1| aspartate racemase [Bacillus cereus VD107]
gi|401243641|gb|EJR50009.1| aspartate racemase [Bacillus cereus VD107]
Length = 223
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 12/136 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE G I MPC+ +H++ E+ S+P L++ + K + + N K R+ +
Sbjct: 70 LESTGVDFIAMPCNTAHLYFKELQHSLSIPILNIVDETLKAIPD-NTK--------RVAL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQV 280
LA A + AG YQ+ + E + +K + + + + +VE AR L AL +
Sbjct: 121 LATQATVQAGIYQDGITKRDIEYIHNEK--WQEMINQVITCIKCGEVEEARKLWS-ALVL 177
Query: 281 LLVRAVNTVILASDDM 296
L V+T I+A D+
Sbjct: 178 HLKNEVDTAIIACTDL 193
>gi|149913430|ref|ZP_01901963.1| arginine/ornithine transport system ATPase [Roseobacter sp.
AzwK-3b]
gi|149812550|gb|EDM72379.1| arginine/ornithine transport system ATPase [Roseobacter sp.
AzwK-3b]
Length = 226
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 26/175 (14%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLN 137
TVGI+GG ++T+ L+ K++ ++D P ++ +P + S +
Sbjct: 2 KTVGILGGMGPEATILLMQKVLDAVPAKDDADHIPLIVHQNPQVP-----------SRIK 50
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
G D ++ + R LE AGA + MPC+ +H + V + +PFL + E
Sbjct: 51 ALIEGTGEDPGPVLAKMARD---LEAAGAAALAMPCNTAHHYAKAVEEASDLPFLDMLEL 107
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFE-VVLPDKATM 251
A EL A + R+G+LA A G ++ +G E V LPD + +
Sbjct: 108 TAAELARAGAR--------RVGLLASPATRLTGVFEAPFAAQGLEPVTLPDDSGL 154
>gi|229062440|ref|ZP_04199756.1| amino-acid racemase [Bacillus cereus AH603]
gi|228716911|gb|EEL68598.1| amino-acid racemase [Bacillus cereus AH603]
Length = 224
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 78/167 (46%), Gaps = 18/167 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE G I MPC+ +H++ +E+ + ++P L++ + K + E N K + +
Sbjct: 70 LESTGVDFIAMPCNTAHLYFEELQRSITIPILNIVDETLKAIPE-NTK--------TVAL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQV 280
LA A + AG YQ+ + E V ++ + + + + ++E AR L + L +
Sbjct: 121 LATEATVQAGIYQDGIAKRNIEYVHNEQ--WQEMINQIISCIKGGEIEEARKLWSL-LVL 177
Query: 281 LLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIKWVKS 327
L V+T I+A D+ ++ D +D LA++ ++ S
Sbjct: 178 QLKDEVDTAIIACTDLNVVVSED------FVDSAQCLAKAFVRMYAS 218
>gi|194014592|ref|ZP_03053209.1| aspartate racemase [Bacillus pumilus ATCC 7061]
gi|194013618|gb|EDW23183.1| aspartate racemase [Bacillus pumilus ATCC 7061]
Length = 235
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 111/254 (43%), Gaps = 29/254 (11%)
Query: 80 ANTVGIVGGASVDSTLNLLGKLVQLS---GEENDFPFLLCSDPLLNKELLSHDRSSFSSL 136
+ T+GI+GG +T++L+ K++ + +++ + + P + DR++
Sbjct: 2 STTIGIMGGMGPLATIDLMKKIISHTPAIKDQDHIHVIADNYPQIP------DRTNA--- 52
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
G G D +I R LE+AGA I++ C+ +H + + V +P +++
Sbjct: 53 -IFGKGEDPTDDMIASAKR-----LERAGADFILIACNTAHFFLENVRHSTHIPIMNMP- 105
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
L+ AN L +G+L + L YQ H +V+ P + ++ ++
Sbjct: 106 -----LETANY--LNKHHYTSVGLLCTDGTLKTQLYQRACAHHKIDVMTPSE-NLQKNVM 157
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDA 316
+ A+ + + L +A ++L+ + +I ++ +L + K IDP
Sbjct: 158 NGIYAVKAGKLSEGESELALAAEILINQGAEAIIAGCTEIPLVLRSTKEV--KVIDPTVI 215
Query: 317 LARSTIKWVKSAEK 330
LA+ +K V EK
Sbjct: 216 LAKEAVKLVYELEK 229
>gi|430841455|ref|ZP_19459374.1| aspartate racemase [Enterococcus faecium E1007]
gi|431071708|ref|ZP_19494679.1| aspartate racemase [Enterococcus faecium E1604]
gi|431586039|ref|ZP_19520554.1| aspartate racemase [Enterococcus faecium E1861]
gi|431739954|ref|ZP_19528873.1| aspartate racemase [Enterococcus faecium E2039]
gi|430494231|gb|ELA70481.1| aspartate racemase [Enterococcus faecium E1007]
gi|430567341|gb|ELB06427.1| aspartate racemase [Enterococcus faecium E1604]
gi|430593217|gb|ELB31203.1| aspartate racemase [Enterococcus faecium E1861]
gi|430604081|gb|ELB41581.1| aspartate racemase [Enterococcus faecium E2039]
Length = 243
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 169 IVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILT 228
IV+ C+ +H + +E+ +P LH+ A EL + + R+ +L +
Sbjct: 80 IVLTCNTAHYFFEELQAATDIPILHMPREAANEL-------VRQHTTGRVAILGTEGSMK 132
Query: 229 AGFYQEKLQHEGFEVVLPDKATME 252
AG Y+ ++++ GFE V+PD A E
Sbjct: 133 AGIYEREVKNLGFETVIPDTALQE 156
>gi|399994490|ref|YP_006574730.1| aspartate racemase [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
gi|398659045|gb|AFO93011.1| putative aspartate racemase [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
Length = 238
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 107/255 (41%), Gaps = 36/255 (14%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+GI+GG ++ + L KLV+ +D C L ++ S + L +G
Sbjct: 5 QTIGILGGMGPEANILLQRKLVEAVPARDD-----CDHIPLQIDMNPQVPSRIAHL-IEG 58
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
G D + + R+ L+ AGA + MPC+ +H + + + +P L++ E A
Sbjct: 59 TGA--DPGPTLAAMARR---LQTAGAVALAMPCNTAHHYAEAITTAVDIPLLNMVELAAD 113
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP-DKATMEHTLIPAL 259
E GS +G+LA A+ ++ L+ G V+ P D M L
Sbjct: 114 HAAE------TLGSGGCVGMLASPAVRGTRLFETALEARGLFVIWPKDDDAM-------L 160
Query: 260 DALNRKDVEG----ARNLLRIALQVLLVRAVNTVILASDD---MQDLLPPDDPLLKKCID 312
A+ VEG R +L A Q L ++A + + D + P+ +D
Sbjct: 161 TAIRAIKVEGPTTAVRQILWAASQELAAAGGMLQLVACSEFSLIADSVAPN----VSAVD 216
Query: 313 PMDALARSTIKWVKS 327
+D LAR IK+ ++
Sbjct: 217 TVDLLARKIIKFAQA 231
>gi|398903488|ref|ZP_10651700.1| aspartate racemase [Pseudomonas sp. GM50]
gi|398176956|gb|EJM64654.1| aspartate racemase [Pseudomonas sp. GM50]
Length = 230
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 106/235 (45%), Gaps = 31/235 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +S+ +L+ + PL + +LL + F +
Sbjct: 2 RTIGLIGGMSWESSAEYY-RLINQQVRDR-------LGPLRSAKLLMYS-VDFGPVEQAQ 52
Query: 141 GGVQLDDS--LIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
+ DD+ ++V+ +R LE GA C+V+ + H ++ +PFLH+++
Sbjct: 53 HAGRWDDAAAILVDAAQR----LEAGGAECVVLCTNTMHKVAGQIQAAIDIPFLHIAD-- 106
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLI 256
A L+AG+ LR+G+L + F + +L +G V++P D+ H +I
Sbjct: 107 -----PAGQAALDAGA-LRVGLLGTAFTMEQDFLKARLTAKGLTVLVPEADERLAVHRII 160
Query: 257 PALDALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD---PLL 307
D L + E +R + + ++ L R +IL ++ L+ P+ PLL
Sbjct: 161 --YDELCVGVISEASRQVYQRVIESLTERGAQAIILGCTEISLLIKPEHSALPLL 213
>gi|421074337|ref|ZP_15535373.1| aspartate racemase [Pelosinus fermentans JBW45]
gi|392527564|gb|EIW50654.1| aspartate racemase [Pelosinus fermentans JBW45]
Length = 230
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 28/182 (15%)
Query: 81 NTVGIVGGASVDST---LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLN 137
T+G++GG S +S+ ++ +LV+ + S + S D + F L
Sbjct: 2 KTIGLIGGLSWESSAVYYRIINELVRDK---------VGSTHSAKSIMYSVDFAEFEKLQ 52
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
+G +L + +I +R L+K GA +V+ + H D V +P LH+++
Sbjct: 53 HQGDWDKLTELMIDAGMR-----LKKGGADFMVICTNTMHKMADAVESQVGIPLLHIADT 107
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKL-QHEGFEVVLPDKATME--HT 254
A E+K ++ ++ +L + FY+ +L Q G EVV+PD+ E H+
Sbjct: 108 AADEVKRRGLR--------KVALLGTKFTMEQDFYKGRLAQKHGIEVVIPDQDEREVIHS 159
Query: 255 LI 256
+I
Sbjct: 160 II 161
>gi|419960053|ref|ZP_14476100.1| putative racemase [Enterobacter cloacae subsp. cloacae GS1]
gi|388605064|gb|EIM34287.1| putative racemase [Enterobacter cloacae subsp. cloacae GS1]
Length = 230
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 21/225 (9%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +ST+ +L+ G + L + LL+ + SS
Sbjct: 2 KTIGLLGGMSWESTIPYY-RLIN-EGVKQRMGGLHSASLLLHSVDFHEIEACQSSGEWDK 59
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
G L D+ + LE+AGA+ I++ + H + CS+PFLH+++ +
Sbjct: 60 AGQILADAALG---------LERAGAQGILLCTNTMHKVASHIEDRCSLPFLHIADATGR 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEHTLIPAL 259
++ A M R+ +L + FY+ +L + G E ++P++A H
Sbjct: 111 AIRTAGMT--------RVALLGTRYTMEQDFYRGRLSSQFGIESLIPEEADRAHINQIIF 162
Query: 260 DALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPD 303
D L E +R ++ L + VI ++ L+P D
Sbjct: 163 DELCLGTFSEASRAWYVSVIEKLAQQGAEGVIFGCTEIGLLVPAD 207
>gi|227551698|ref|ZP_03981747.1| aspartate racemase [Enterococcus faecium TX1330]
gi|257887166|ref|ZP_05666819.1| aspartate racemase [Enterococcus faecium 1,141,733]
gi|257895703|ref|ZP_05675356.1| aspartate racemase [Enterococcus faecium Com12]
gi|293377687|ref|ZP_06623876.1| aspartate racemase [Enterococcus faecium PC4.1]
gi|293571882|ref|ZP_06682898.1| aspartate racemase [Enterococcus faecium E980]
gi|431033044|ref|ZP_19490890.1| aspartate racemase [Enterococcus faecium E1590]
gi|431106154|ref|ZP_19497311.1| aspartate racemase [Enterococcus faecium E1613]
gi|431737523|ref|ZP_19526476.1| aspartate racemase [Enterococcus faecium E1972]
gi|431752062|ref|ZP_19540748.1| aspartate racemase [Enterococcus faecium E2620]
gi|227179139|gb|EEI60111.1| aspartate racemase [Enterococcus faecium TX1330]
gi|257823220|gb|EEV50152.1| aspartate racemase [Enterococcus faecium 1,141,733]
gi|257832268|gb|EEV58689.1| aspartate racemase [Enterococcus faecium Com12]
gi|291608136|gb|EFF37442.1| aspartate racemase [Enterococcus faecium E980]
gi|292643687|gb|EFF61808.1| aspartate racemase [Enterococcus faecium PC4.1]
gi|430564145|gb|ELB03329.1| aspartate racemase [Enterococcus faecium E1590]
gi|430569686|gb|ELB08676.1| aspartate racemase [Enterococcus faecium E1613]
gi|430598610|gb|ELB36345.1| aspartate racemase [Enterococcus faecium E1972]
gi|430614671|gb|ELB51651.1| aspartate racemase [Enterococcus faecium E2620]
Length = 243
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 169 IVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILT 228
IV+ C+ +H + +E+ +P LH+ A EL + + R+ +L +
Sbjct: 80 IVLTCNTAHYFFEELQAATDIPILHMPREAANEL-------VRQHTTGRVAILGTEGSMK 132
Query: 229 AGFYQEKLQHEGFEVVLPDKATME 252
AG Y+ ++++ GFE V+PD A E
Sbjct: 133 AGIYEREVKNLGFETVIPDTALQE 156
>gi|257898273|ref|ZP_05677926.1| aspartate racemase [Enterococcus faecium Com15]
gi|257836185|gb|EEV61259.1| aspartate racemase [Enterococcus faecium Com15]
Length = 243
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 169 IVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILT 228
IV+ C+ +H + +E+ +P LH+ A EL + + R+ +L +
Sbjct: 80 IVLTCNTAHYFFEELQAATDIPILHMPREAANEL-------VRQHTTGRVAILGTEGSMK 132
Query: 229 AGFYQEKLQHEGFEVVLPDKATME 252
AG Y+ ++++ GFE V+PD A E
Sbjct: 133 AGIYEREVKNLGFETVIPDTALQE 156
>gi|154685011|ref|YP_001420172.1| hypothetical protein RBAM_005490 [Bacillus amyloliquefaciens FZB42]
gi|154350862|gb|ABS72941.1| RacX [Bacillus amyloliquefaciens FZB42]
Length = 226
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 42/224 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSG--EENDFPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + K+V ++ G + DFP ++ C P + L H
Sbjct: 2 IGILAGMGPKSTGPFVDKVVDECQKIYGAIHDMDFPHMMIYSCPTPFYMNKPLDH----- 56
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
++ ++I V LEK G I +PC+ +HI+ +++ K SVP L+
Sbjct: 57 ---------TDMEKAII-----EGAVKLEKTGVDFIAIPCNTAHIYFNQIKKSISVPLLN 102
Query: 194 -VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
V E + K + GS + +LA + +G +QE L EG++ + + + +
Sbjct: 103 MVDETINK---------IPKGSK-KAALLATVPTVQSGIFQEALNREGYDFL--HQVSWQ 150
Query: 253 HTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
+ ++ + + + A L L L V+TVI+A D+
Sbjct: 151 IYVDHIIEKIKQGQINEAGTLYD-ELHRELAEKVDTVIIACTDL 193
>gi|358449146|ref|ZP_09159636.1| aspartate racemase [Marinobacter manganoxydans MnI7-9]
gi|357226563|gb|EHJ05038.1| aspartate racemase [Marinobacter manganoxydans MnI7-9]
Length = 231
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 29/173 (16%)
Query: 81 NTVGIVGGASVDST---LNLLGKLVQ--LSGEENDFPFLLCSDPLLNKELLSHDRSSFSS 135
T+G++GG S +ST LL + V+ L G L S L+ L S D + +
Sbjct: 2 KTIGLLGGMSWESTQTYYRLLNEGVKGRLGG--------LHSAKLV---LFSVDFAEIEA 50
Query: 136 LNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195
L KG D + L + L++AGA +V+ + H E+ + +P LH++
Sbjct: 51 LQHKG-----DWPATADILSDAALSLQRAGADFLVIGTNTMHKVAPEIEQAIEIPLLHIA 105
Query: 196 ECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDK 248
+ A+ LK + R+G+L + FY+++L+ G +V+ PD+
Sbjct: 106 DATAQVLKNDGIN--------RVGLLGTRFTMEQAFYRDRLEAAGIDVLTPDE 150
>gi|448377524|ref|ZP_21560220.1| aspartate racemase [Halovivax asiaticus JCM 14624]
gi|445655468|gb|ELZ08313.1| aspartate racemase [Halovivax asiaticus JCM 14624]
Length = 252
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+E AGA +VM + H + + S+PF+H+ + A+ ++ ++ IGV
Sbjct: 86 IEAAGADFVVMATNTMHRVAPRLVEALSIPFVHIVDVAAEAIRTDGIET--------IGV 137
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDV 267
L A++ FY ++ G E ++P A E D L +V
Sbjct: 138 LGTAAVMEGEFYHDRFADHGIETLVPGAADREAVDRIIFDELTHGEV 184
>gi|11499017|ref|NP_070251.1| aspartate racemase [Archaeoglobus fulgidus DSM 4304]
gi|2649148|gb|AAB89824.1| aspartate racemase [Archaeoglobus fulgidus DSM 4304]
Length = 225
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Query: 159 VFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRI 218
V LE AGA+ +++ + H D V K +P +++ + A+ LK +K +
Sbjct: 67 VKLENAGAKAVLICTNTMHKVADAVEKRIGIPLINIIDVTAEALKGDGVK--------KA 118
Query: 219 GVLAKNAILTAGFYQEKLQHEGFEVVLPDK 248
G+L + GFYQE+++ G EV++P+K
Sbjct: 119 GLLGTKFTMEDGFYQERMKKHGIEVIVPEK 148
>gi|199597926|ref|ZP_03211351.1| Aspartate racemase [Lactobacillus rhamnosus HN001]
gi|258507253|ref|YP_003170004.1| aspartate racemase [Lactobacillus rhamnosus GG]
gi|385826974|ref|YP_005864746.1| aspartate racemase [Lactobacillus rhamnosus GG]
gi|418071654|ref|ZP_12708928.1| aspartate racemase [Lactobacillus rhamnosus R0011]
gi|423078158|ref|ZP_17066844.1| aspartate racemase [Lactobacillus rhamnosus ATCC 21052]
gi|199591183|gb|EDY99264.1| Aspartate racemase [Lactobacillus rhamnosus HN001]
gi|257147180|emb|CAR86153.1| Aspartate racemase [Lactobacillus rhamnosus GG]
gi|259648619|dbj|BAI40781.1| aspartate racemase [Lactobacillus rhamnosus GG]
gi|357539148|gb|EHJ23168.1| aspartate racemase [Lactobacillus rhamnosus R0011]
gi|357552086|gb|EHJ33863.1| aspartate racemase [Lactobacillus rhamnosus ATCC 21052]
Length = 250
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 79/172 (45%), Gaps = 26/172 (15%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSD---PLLNKELLSHDRSSFSSLN 137
+G +G + +S + LL + ++ ++L +D P +L H + SF
Sbjct: 6 TVIGGMGTPATESYVRLLNQRTHAHSDQEYLNYILVNDATVPDRTDYILDHSKPSF---- 61
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
D ++E++R + + IV+ C+ +H ++D++ SVP LH+
Sbjct: 62 -------FPD--LLEDVRAQSLL----QPEFIVIVCNTAHYFYDQLAAASSVPLLHMPRL 108
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
+++ E P E RIG++A + G Y ++++ G +V+L D+A
Sbjct: 109 AIRDMCERF--PNEE----RIGLIATQGTIKDGIYSHEIENTGRKVILGDQA 154
>gi|221198449|ref|ZP_03571495.1| aspartate racemase [Burkholderia multivorans CGD2M]
gi|221208602|ref|ZP_03581603.1| aspartate racemase [Burkholderia multivorans CGD2]
gi|221171593|gb|EEE04039.1| aspartate racemase [Burkholderia multivorans CGD2]
gi|221182381|gb|EEE14782.1| aspartate racemase [Burkholderia multivorans CGD2M]
Length = 230
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE AGA +V+ + H HD + ++PFLH+++ L++A ++ R+ +
Sbjct: 71 LEAAGADLVVLTTNTMHRVHDAIEAAVTLPFLHIADPTGAALRDAGVE--------RVAL 122
Query: 221 LAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEHTLIPALDALNRKDV--EGARNLLRIA 277
L + FY ++L+ G +V++PD+ D L V E +RI
Sbjct: 123 LGTRYTMELPFYAQRLRERFGIDVLVPDERERADVHRIIYDELCHGIVARESRGTYVRI- 181
Query: 278 LQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIKW 324
++ L R VIL ++ L+ DD L D A++ ++W
Sbjct: 182 IESLAQRGAQAVILGCTEITLLIGTDDSPL-PVFDTTALHAKAAVEW 227
>gi|404402664|ref|ZP_10994248.1| aspartate racemase [Pseudomonas fuscovaginae UPB0736]
Length = 230
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 97/231 (41%), Gaps = 23/231 (9%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +S+ + Q PL + LL + +
Sbjct: 2 RTIGLIGGMSWESSAEYYRIINQQVRSR--------LGPLRSAALLMYSVDFGPVEQAQH 53
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
G D LI+++ R+ L+ GA C+V+ + H ++ S+PFLH++ +
Sbjct: 54 AGRWDDAGLILQDAARR---LQAGGAECVVLCTNTMHRLAQQIEGAVSIPFLHIATPTGQ 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALD 260
L G+ R+G+L + F +++L +G EV++P+ + D
Sbjct: 111 -------AALARGAT-RVGLLGTAFTMEQDFLKQRLVAQGLEVLIPETEQRQAVHRIIYD 162
Query: 261 ALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD---PLL 307
L + E +R + + ++ L R +IL ++ L+ P+ PLL
Sbjct: 163 ELCVGVINEQSRQVYQRVIEGLAARGAEAIILGCTEIGLLIKPEHSPLPLL 213
>gi|238751301|ref|ZP_04612795.1| Aspartate racemase [Yersinia rohdei ATCC 43380]
gi|238710575|gb|EEQ02799.1| Aspartate racemase [Yersinia rohdei ATCC 43380]
Length = 233
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 32/172 (18%)
Query: 83 VGIVGGASVDSTL---NLLGKLV--QLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLN 137
+G++GG S +ST+ ++ + V QL G L S ++ L S D L
Sbjct: 4 LGLIGGMSWESTIPYYRMINQQVKEQLGG--------LHSAKII---LYSVDFHEIEQLQ 52
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
KG D + L V L++AGA IV+ + H D++ C +P LH+++
Sbjct: 53 AKG-----DWHTAAKVLSDAAVSLKRAGAEVIVVCTNTMHKVADDIEAACGLPLLHIADA 107
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKL--QHEGFEVVLPD 247
A ++K+ + +IG+L + FY+ +L QH+ EV+ PD
Sbjct: 108 TAAQIKQQGIN--------KIGLLGTRYTMEQDFYRGRLAEQHD-IEVITPD 150
>gi|150397172|ref|YP_001327639.1| aspartate racemase [Sinorhizobium medicae WSM419]
gi|150028687|gb|ABR60804.1| aspartate racemase [Sinorhizobium medicae WSM419]
Length = 239
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 85/177 (48%), Gaps = 23/177 (12%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
+G++GG S +S+ + ++V + E L + E+L H ++ + G
Sbjct: 6 IGLIGGMSFESS-AVYYRMVNEAVRER-------RGKLHSAEVLLHSVDFQGIVDLQKAG 57
Query: 143 VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKEL 202
+ +L + ++ R L GA CI++ + H+ D V + VP +++ + A+ L
Sbjct: 58 RWDEAALRLSDVARG---LVAGGADCILICTNTMHLIADAVQRSVDVPLINIIDETAQRL 114
Query: 203 KEA-NMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA--TMEHTLI 256
K A + KPL +LA + GFY E+++ G ++++PD A T+ H +I
Sbjct: 115 KSAGSRKPL---------LLATRYTMEHGFYAERMKTHGIDLMVPDAAGRTLTHNVI 162
>gi|418591|sp|P32968.1|YPNL_PECCC RecName: Full=Uncharacterized protein in pnlA 3'region
Length = 150
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 14/149 (9%)
Query: 179 WHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQH 238
W +++ + C + + + + +K AN R+G+LA A + A YQ+ L
Sbjct: 1 WFNDLKQQCRAEMISIIDVTCQAIKHANTT--------RVGLLATTATVKARIYQDNLIT 52
Query: 239 EGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQD 298
+ + PD A +H ++ ++ A D+ GA +LL LL V +IL ++
Sbjct: 53 DNIDCYTPDDAD-QHQVMESIYAYKSGDIAGAYSLLSPVKDRLLQAGVEKIILGCTELPL 111
Query: 299 LLPPD---DPLLKKCIDPMDALARSTIKW 324
+L + P + +D + L + T++W
Sbjct: 112 ILEQEVRTSP--QHYVDATEELIKKTVEW 138
>gi|374996712|ref|YP_004972211.1| aspartate racemase [Desulfosporosinus orientis DSM 765]
gi|357215078|gb|AET69696.1| aspartate racemase [Desulfosporosinus orientis DSM 765]
Length = 230
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 98/238 (41%), Gaps = 42/238 (17%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGG 141
T+G++GG S +ST + L + +N++L + S C
Sbjct: 3 TIGVIGGMSWESTT----------------TYYLELNRYINQKL-----GGYYSAKCILY 41
Query: 142 GVQLDDSLIV----------ENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPF 191
VQ D V E L + L+ +GA I++ + HI + + +PF
Sbjct: 42 NVQYQDIKDVHKNGDWDRAGEILVEAALSLKASGADFIILATNTMHIVAPRIKEAVDLPF 101
Query: 192 LHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATM 251
LH++E A L N+ + +L + FY++ L ++G V++P+K +
Sbjct: 102 LHIAEVTADRLLRDNINT--------VALLGTRFTMEKDFYKKVLVNQGINVLIPEKDQI 153
Query: 252 E--HTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLL 307
E H +I L R + +R + + L R+ VIL ++ L+ +D +L
Sbjct: 154 EKIHEIINKELILGRVE-SSSRECFKNIILSLQKRSAQGVILGCTEIGLLIRQEDSVL 210
>gi|269797360|ref|YP_003311260.1| aspartate racemase [Veillonella parvula DSM 2008]
gi|269093989|gb|ACZ23980.1| aspartate racemase [Veillonella parvula DSM 2008]
Length = 231
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 11/147 (7%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LEKAGA IV+ + H D++ + +P LH++E A EL+++ + ++G+
Sbjct: 71 LEKAGADYIVICTNTMHKVADKIERHIHIPLLHIAEMTAVELEKSGIT--------KVGL 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLIPALDALNRKDVEGARNLLRIAL 278
L + FY+ L++ G VV+P D+ + +++I L E + L I +
Sbjct: 123 LGTKYTMQQDFYKCILENRGIHVVIPNEDQVELVNSIIYNELCLGVISNESKQQYLDI-I 181
Query: 279 QVLLVRAVNTVILASDDMQDLLPPDDP 305
L+ V VIL ++ L+ DD
Sbjct: 182 GDLVKSGVQGVILGCTEIGLLIKQDDT 208
>gi|423449345|ref|ZP_17426224.1| aspartate racemase [Bacillus cereus BAG5O-1]
gi|423463569|ref|ZP_17440337.1| aspartate racemase [Bacillus cereus BAG6O-1]
gi|423541815|ref|ZP_17518206.1| aspartate racemase [Bacillus cereus HuB4-10]
gi|423622160|ref|ZP_17597938.1| aspartate racemase [Bacillus cereus VD148]
gi|401128232|gb|EJQ35931.1| aspartate racemase [Bacillus cereus BAG5O-1]
gi|401169635|gb|EJQ76879.1| aspartate racemase [Bacillus cereus HuB4-10]
gi|401262258|gb|EJR68402.1| aspartate racemase [Bacillus cereus VD148]
gi|402421770|gb|EJV54018.1| aspartate racemase [Bacillus cereus BAG6O-1]
Length = 224
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 95/223 (42%), Gaps = 40/223 (17%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDIDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE AG I +PC+ +H++ +E+ S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESAGVDFIAIPCNTAHLYFEELQHSLSIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + + + E + R+ +LA A + AG YQ+ + E + +K +
Sbjct: 103 IVDETLRAIPE---------TVKRVALLATEATVQAGIYQDGIAKRNIEYLHNEK--WQE 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
+ + + ++E AR L AL + L ++T I+A D+
Sbjct: 152 MINQIITCIKSGEIEEARKLWS-ALVLQLKDEIDTAIIACTDL 193
>gi|229550848|ref|ZP_04439573.1| aspartate racemase [Lactobacillus rhamnosus LMS2-1]
gi|258538440|ref|YP_003172939.1| aspartate racemase [Lactobacillus rhamnosus Lc 705]
gi|385834193|ref|YP_005871967.1| aspartate racemase [Lactobacillus rhamnosus ATCC 8530]
gi|421770496|ref|ZP_16207190.1| Aspartate racemase [Lactobacillus rhamnosus LRHMDP2]
gi|421773590|ref|ZP_16210232.1| Aspartate racemase [Lactobacillus rhamnosus LRHMDP3]
gi|229315798|gb|EEN81771.1| aspartate racemase [Lactobacillus rhamnosus LMS2-1]
gi|257150116|emb|CAR89088.1| Aspartate racemase [Lactobacillus rhamnosus Lc 705]
gi|355393684|gb|AER63114.1| aspartate racemase [Lactobacillus rhamnosus ATCC 8530]
gi|411181697|gb|EKS48862.1| Aspartate racemase [Lactobacillus rhamnosus LRHMDP3]
gi|411181883|gb|EKS49042.1| Aspartate racemase [Lactobacillus rhamnosus LRHMDP2]
Length = 250
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 79/172 (45%), Gaps = 26/172 (15%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSD---PLLNKELLSHDRSSFSSLN 137
+G +G + +S + LL + ++ ++L +D P +L H + SF
Sbjct: 6 TVIGGMGTPATESYVRLLNQRTHAHSDQEYLNYILVNDATVPDRTDYILDHSKPSF---- 61
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
D ++E++R + + IV+ C+ +H ++D++ SVP LH+
Sbjct: 62 -------FPD--LLEDVRAQSLL----QPEFIVIVCNTAHYFYDQLAAASSVPLLHMPRL 108
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
+++ E P E RIG++A + G Y ++++ G +V+L D+A
Sbjct: 109 AIRDMCERF--PNEE----RIGLIATQGTIKDGIYSHEIENTGRKVILGDQA 154
>gi|307244154|ref|ZP_07526272.1| aspartate racemase [Peptostreptococcus stomatis DSM 17678]
gi|306492525|gb|EFM64560.1| aspartate racemase [Peptostreptococcus stomatis DSM 17678]
Length = 239
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 75/166 (45%), Gaps = 21/166 (12%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGG 141
TVG++GG +T+ +V+++ D L D ++ + DR+++
Sbjct: 6 TVGVLGGLGPMATVYFYDMVVEMTDARRDQDHL---DMIIMNRATTPDRTAYI------- 55
Query: 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH-VSECVAK 200
+ D+ +E + LE AGA +V+ C+ +H ++ ++ +G VP ++ + E V
Sbjct: 56 -IGSSDASPLEYISSDAKRLEAAGADFLVLTCNTAHYFYKDIVEGLGVPLINMIEETVVH 114
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
K+ + K IG+LA + G YQ+ + + +P
Sbjct: 115 AKKQGHRK---------IGILATTGNIRTGLYQDMCVAQSMDYYVP 151
>gi|165976728|ref|YP_001652321.1| RacX protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|190150628|ref|YP_001969153.1| aspartate racemase [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|303250610|ref|ZP_07336807.1| RacX protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|303252061|ref|ZP_07338230.1| RacX protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|307248334|ref|ZP_07530358.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 2 str.
S1536]
gi|165876829|gb|ABY69877.1| RacX protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|189915759|gb|ACE62011.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|302649043|gb|EFL79230.1| RacX protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|302650598|gb|EFL80757.1| RacX protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|306855155|gb|EFM87334.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 2 str.
S1536]
Length = 229
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 82 TVGIVGGASVDST----LNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSL- 136
T+GI+GG S +ST LN+ + Q+ G L+ S F+ +
Sbjct: 3 TLGILGGMSPESTISYYLNINRAVNQVLGGNASAKILMSS-------------VDFAEIV 49
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
NC+ G D E L ++ LE+AGA I++ + H + + SVPFLH+ +
Sbjct: 50 NCQKSG---DWQKAGEILVQQAKLLEQAGAEGILLATNTMHKVASPIVEAISVPFLHILD 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME--HT 254
VA +K + + +L ++ FY + L+ G ++PD+ T + H
Sbjct: 107 AVADSIKAKGLT--------TVALLGTAFTMSGNFYVDGLRQRGITPLVPDEQTQQEIHR 158
Query: 255 LI 256
+I
Sbjct: 159 II 160
>gi|313897176|ref|ZP_07830720.1| aspartate racemase [Clostridium sp. HGF2]
gi|373122783|ref|ZP_09536643.1| aspartate racemase [Erysipelotrichaceae bacterium 21_3]
gi|422327008|ref|ZP_16408036.1| aspartate racemase [Erysipelotrichaceae bacterium 6_1_45]
gi|312957897|gb|EFR39521.1| aspartate racemase [Clostridium sp. HGF2]
gi|371662735|gb|EHO27933.1| aspartate racemase [Erysipelotrichaceae bacterium 21_3]
gi|371664498|gb|EHO29671.1| aspartate racemase [Erysipelotrichaceae bacterium 6_1_45]
Length = 236
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 34/232 (14%)
Query: 81 NTVGIVGGASVDSTLNLL-----GKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSS 135
T+G++GG S +ST+ G QL G L + +++ H
Sbjct: 2 KTIGLIGGMSWESTIPYYQIINEGVKAQLGG-------------LHSAKIILHSVEFDEI 48
Query: 136 LNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195
C+ G D E L + LE AGA I++ + H ++ +P +H++
Sbjct: 49 EKCQSRG---DWKKSGEILGKAAQGLEAAGADFILICTNTMHKVAPQIASMIHIPIIHIA 105
Query: 196 ECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME--- 252
+ A+EL N+ ++G+L +T FY++KL G EV++P+ +E
Sbjct: 106 DATAEELLNHNIH--------KVGLLGTKYTMTQDFYKQKLVERGIEVIVPEATEIEVIN 157
Query: 253 HTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
H + L K E +R + ++ + R VIL ++ L+ D
Sbjct: 158 HIIFHELCVGQIK--EDSRKKFQSIIERMKSRGAEGVILGCTEIGLLIHQSD 207
>gi|57168765|ref|ZP_00367896.1| aspartate racemase [Campylobacter coli RM2228]
gi|57019812|gb|EAL56495.1| aspartate racemase [Campylobacter coli RM2228]
Length = 221
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE GA I++ + H D++ K +P +H+++ AK LK+ N+ IG+
Sbjct: 62 LELGGADFILIATNTMHKIFDQIQKNIKIPLIHIAQSTAKILKQQNIHT--------IGL 113
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
L + FY+ L+ E + P+++ M+
Sbjct: 114 LGTQYTMMEDFYKNALKKENINTITPNQSDMQ 145
>gi|429120329|ref|ZP_19181006.1| Aspartate racemase [Cronobacter sakazakii 680]
gi|426325072|emb|CCK11743.1| Aspartate racemase [Cronobacter sakazakii 680]
Length = 233
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 81/169 (47%), Gaps = 22/169 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
TVG++GG S +ST+ +L+ G + L + LL+ +S +S +
Sbjct: 2 KTVGLLGGMSWESTIPYY-RLIN-EGVRDRLGGLHSAQLLLHSVDFHDIEASQASGEWEK 59
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
G E L + + LE+AGA+ IV+ + H ++ C++PFLH+++ +
Sbjct: 60 AG---------EMLAQAALGLERAGAQAIVLCTNTMHKVAHQIEARCALPFLHIADATGR 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEV--VLPD 247
+ +A ++ ++ +L + FY+ +L+ EGF V ++PD
Sbjct: 111 AIAQAGLR--------QVALLGTRYTMEQNFYRARLE-EGFGVTSIIPD 150
>gi|366086616|ref|ZP_09453101.1| aspartate racemase [Lactobacillus zeae KCTC 3804]
Length = 249
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 78/172 (45%), Gaps = 26/172 (15%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSD---PLLNKELLSHDRSSFSSLN 137
+G +G + +S + LL + ++ ++L +D P +L H + SF
Sbjct: 6 TVIGGMGTPATESYVRLLNQRTHAHSDQEYLNYILVNDATVPDRTDYILDHSKPSFYPD- 64
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
++E+++ + + IV+ C+ +H ++D++ +P LH+
Sbjct: 65 ------------LLEDIQAQSLL----NPEFIVIVCNTAHYFYDQLAAATPIPLLHMPRL 108
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
+++ E P E RIG++A + G Y +++++ G EVVL D+A
Sbjct: 109 AIRDMCERF--PDEK----RIGLIATQGTIKDGIYSQEIENTGREVVLGDQA 154
>gi|366051950|ref|ZP_09449672.1| aspartate racemase [Lactobacillus suebicus KCTC 3549]
Length = 239
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 169 IVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILT 228
V+ C+ +H ++D++ +VP LH+ + E+K N K R+G+L +
Sbjct: 80 FVLTCNSAHYFYDDMINATTVPILHMPKLAVAEIKTINPK------AKRVGILGTPGTVK 133
Query: 229 AGFYQEKLQHEGFEVVLPDKATMEHT 254
G Y + ++ G+E+V P + ++ T
Sbjct: 134 TGIYDQFIKDAGYELVKPTQDILDET 159
>gi|420242333|ref|ZP_14746392.1| aspartate racemase [Rhizobium sp. CF080]
gi|398067892|gb|EJL59362.1| aspartate racemase [Rhizobium sp. CF080]
Length = 238
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 29/171 (16%)
Query: 82 TVGIVGGASVDST---LNLLGKLVQ--LSGEENDFPFLLCSDPLLNKELLSHDRSSFSSL 136
++G++GG S +ST L+ ++V+ L G L++ +LL H + +
Sbjct: 3 SIGLIGGMSFESTSVYYRLINEMVRDRLGG-------------LVSADLLLHSVNFAEVV 49
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+ + G L E+L L+ AGA C+++ + H+ +V +P +H+ +
Sbjct: 50 DMQKAGRW---DLAAEHLSNSARGLKAAGAECVLICTNTMHLVAPQVQAAIDIPLIHIID 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD 247
AK LK +K PL +LA + GFY + ++ G +V+ PD
Sbjct: 107 ETAKALKTQGLK-----RPL---LLATRYTMEHGFYTDHMKALGIDVMTPD 149
>gi|290890562|ref|ZP_06553637.1| hypothetical protein AWRIB429_1027 [Oenococcus oeni AWRIB429]
gi|419758779|ref|ZP_14285091.1| aspartate racemase [Oenococcus oeni AWRIB304]
gi|421195282|ref|ZP_15652491.1| aspartate racemase [Oenococcus oeni AWRIB568]
gi|421197395|ref|ZP_15654570.1| aspartate racemase [Oenococcus oeni AWRIB576]
gi|290479958|gb|EFD88607.1| hypothetical protein AWRIB429_1027 [Oenococcus oeni AWRIB429]
gi|399904234|gb|EJN91690.1| aspartate racemase [Oenococcus oeni AWRIB304]
gi|399975004|gb|EJO09072.1| aspartate racemase [Oenococcus oeni AWRIB576]
gi|399975988|gb|EJO10017.1| aspartate racemase [Oenococcus oeni AWRIB568]
Length = 233
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 107/249 (42%), Gaps = 25/249 (10%)
Query: 84 GIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSH----DRSSFSSLNCK 139
GI+GG +T N + L +L+ +D FL N + +H DR+++ K
Sbjct: 6 GILGGMGTMATENFVRTLDRLTETHSDQNFL-------NYLVFNHACIPDRTAYIFDRTK 58
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
+ + E++++ L A +V+ C+ +H + E+ +P L++
Sbjct: 59 DNPL----PFLKEDIQQ----LNSLSADFVVITCNTAHYFLPELTAIAKMPILNMPSLAV 110
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
+ K+ AG+ L+I +LA + + +G YQEK+ + + ++PDK +
Sbjct: 111 QACKKRT-----AGT-LKISILATDGTIASGLYQEKISAQSDQAIIPDKELQIQVMKFIY 164
Query: 260 DALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALAR 319
+ + + A + ++L+ + + VIL + + + + ID LA
Sbjct: 165 QDIKQNNRIEADKYHHLVEKLLIKQKCDYVILGCTEFSVAQEREPYISDRVIDAQQVLAN 224
Query: 320 STIKWVKSA 328
+ + K++
Sbjct: 225 TAVSMAKNS 233
>gi|332654847|ref|ZP_08420589.1| aspartate racemase [Ruminococcaceae bacterium D16]
gi|332516190|gb|EGJ45798.1| aspartate racemase [Ruminococcaceae bacterium D16]
Length = 239
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 46/114 (40%), Gaps = 8/114 (7%)
Query: 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
G Q + E L LE AG I +PC+ SH + D V + S+P +H+ A+
Sbjct: 56 GTQAQKDEVYERLLSDARMLEGAGCTAIAVPCNTSHYFLDRVQEQISIPIVHMIRETARL 115
Query: 202 LKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTL 255
L K R G+LA + + G YQ + G P A + +
Sbjct: 116 LVSQGKK--------RPGILATDGTIRTGLYQREFAAFGIYAAAPRPAAQKQVM 161
>gi|161524302|ref|YP_001579314.1| aspartate racemase [Burkholderia multivorans ATCC 17616]
gi|189350942|ref|YP_001946570.1| aspartate racemase [Burkholderia multivorans ATCC 17616]
gi|160341731|gb|ABX14817.1| aspartate racemase [Burkholderia multivorans ATCC 17616]
gi|189334964|dbj|BAG44034.1| aspartate racemase [Burkholderia multivorans ATCC 17616]
Length = 230
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE AGA +V+ + H HD + ++PFLH+++ L++A ++ R+ +
Sbjct: 71 LEAAGADLVVLTTNTMHRVHDAIEAAVTLPFLHIADPTGAALRDAGVE--------RVAL 122
Query: 221 LAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEHTLIPALDALNRKDV--EGARNLLRIA 277
L + FY ++L+ G +V++PD+ D L V E +RI
Sbjct: 123 LGTRYTMELPFYAQRLRERFGIDVLVPDERERADVHRIIYDELCHGIVARESRAAYVRI- 181
Query: 278 LQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIKW 324
++ L R VIL ++ L+ DD L D A++ ++W
Sbjct: 182 IESLAQRGAQAVILGCTEITLLIGADDSPL-PVFDTTALHAKAAVEW 227
>gi|317491295|ref|ZP_07949731.1| aspartate racemase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316920842|gb|EFV42165.1| aspartate racemase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 233
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 108/235 (45%), Gaps = 33/235 (14%)
Query: 81 NTVGIVGGASVDSTL---NLLGKLV--QLSGEENDFPFLLCSDPLLNKELLSHDRSSFSS 135
T+G++GG S +ST+ ++ + V QL G L S L+ L S D +
Sbjct: 2 KTLGLLGGMSWESTVPYYRIINETVKNQLGG--------LHSARLV---LYSVDFAEVEH 50
Query: 136 LNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195
L +G Q + L+ + +R L+ AGA IV+ + H +++ C +P LH++
Sbjct: 51 LQMRGEWAQAGE-LLADAAQR----LQAAGAEGIVVCTNTMHKVAEQIESRCGLPLLHIA 105
Query: 196 ECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATME-- 252
+ A +K + RIG+L + FY+ +L + G EV++P+++ E
Sbjct: 106 DATAARIKAQGLT--------RIGLLGTRFTMEQDFYRGRLTDKFGIEVIVPNESDREVI 157
Query: 253 HTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLL 307
H +I L + E +R R +Q L ++ +IL ++ L+ D ++
Sbjct: 158 HRIIYQELCLGQIRPE-SRQQYREIMQRLSEQSAQGIILGCTEIALLVAQTDAVV 211
>gi|421473271|ref|ZP_15921401.1| aspartate racemase [Burkholderia multivorans ATCC BAA-247]
gi|400221356|gb|EJO51816.1| aspartate racemase [Burkholderia multivorans ATCC BAA-247]
Length = 230
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE AGA +V+ + H HD + ++PFLH+++ L++A ++ R+ +
Sbjct: 71 LEAAGADLVVLTTNTMHRVHDAIEAAVTLPFLHIADPTGAALRDAGVE--------RVAL 122
Query: 221 LAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEHTLIPALDALNRKDV--EGARNLLRIA 277
L + FY ++L+ G +V++PD+ D L + E +RI
Sbjct: 123 LGTRYTMELPFYAQRLRERFGIDVLVPDERERADVHRIIYDELCHGIIARESRGTYVRI- 181
Query: 278 LQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIKW 324
++ L R VIL ++ L+ DD L D A++ ++W
Sbjct: 182 IESLAQRGAQAVILGCTEITLLIGTDDSPL-PVFDTTALHAKAAVEW 227
>gi|398840596|ref|ZP_10597830.1| aspartate racemase [Pseudomonas sp. GM102]
gi|398110178|gb|EJM00086.1| aspartate racemase [Pseudomonas sp. GM102]
Length = 230
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 106/235 (45%), Gaps = 31/235 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +S+ +L+ + PL + +LL + F +
Sbjct: 2 RTIGLIGGMSWESSAEYY-RLINQQVRDR-------LGPLRSAKLLMYS-VDFGPVEQAQ 52
Query: 141 GGVQLDDS--LIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
+ DD+ ++V+ +R LE GA C+V+ + H ++ +PFLH+++
Sbjct: 53 HAGRWDDAAAILVDAAQR----LEAGGAECVVLCTNTMHKVAGQIQAAIDIPFLHIAD-- 106
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLI 256
A L+AG+ LR+G+L + F + +L +G V++P D+ H +I
Sbjct: 107 -----PAGQAALDAGA-LRVGLLGTAFTMEQDFLKARLTAKGLTVLVPEADERLAVHRII 160
Query: 257 PALDALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD---PLL 307
D L + E +R + + ++ L R +IL ++ L+ P+ PLL
Sbjct: 161 --YDELCVGVISEASRQVYQRVIESLTERGAQAIILGCTEIGLLIKPEHSALPLL 213
>gi|366089853|ref|ZP_09456219.1| aspartate racemase [Lactobacillus acidipiscis KCTC 13900]
Length = 239
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 96/219 (43%), Gaps = 39/219 (17%)
Query: 85 IVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSH----DRSSFSSLNCKG 140
I+GG +T + +L + + +D +L N L++H DR+ + + K
Sbjct: 7 IIGGMGTSATETYIHQLNERTPANSDQDYL-------NYILVNHATVPDRTDYILDHTKP 59
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS----E 196
+ + ++E+ +++ +PC+ +H ++DE+ K +P LH+ +
Sbjct: 60 SPL----TPLLEDFKQQAAL----KPDFFTLPCNTAHYFYDELTKVTDIPILHMPREAVK 111
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHT-- 254
++K+L A R+G+++ Y +++Q G+E+VLPD + T
Sbjct: 112 WISKKLPTAK----------RVGLISTEGTRADHIYDDEIQSAGYELVLPDDKIQQQTTE 161
Query: 255 -LIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILA 292
+ + N D +LR Q+ + + +TV+L
Sbjct: 162 LIYGNVKEKNHVDRTLYHEILR---QMFVEKGCDTVVLG 197
>gi|229013961|ref|ZP_04171086.1| amino-acid racemase [Bacillus mycoides DSM 2048]
gi|423660394|ref|ZP_17635563.1| aspartate racemase [Bacillus cereus VDM022]
gi|228747334|gb|EEL97212.1| amino-acid racemase [Bacillus mycoides DSM 2048]
gi|401303064|gb|EJS08631.1| aspartate racemase [Bacillus cereus VDM022]
Length = 224
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 77/163 (47%), Gaps = 18/163 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE G I MPC+ +H++ +E+ + ++P L++ + K + E N K R+ +
Sbjct: 70 LESTGVDFIAMPCNTAHLYFEELQRSITIPILNIVDETLKAIPE-NTK--------RVAL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQV 280
LA A + A YQ+ + E + ++ + + + + ++E AR L + L +
Sbjct: 121 LATEATVQASIYQDGITKRDIEYIHNEQ--WQEMINQIITCIKGGEIEEARKLWSL-LVL 177
Query: 281 LLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIK 323
L V+T I+A D+ ++ D +D LA++ ++
Sbjct: 178 QLKDEVDTAIIACTDLNVVVSED------FVDSAQCLAKAVVR 214
>gi|116491073|ref|YP_810617.1| aspartate racemase [Oenococcus oeni PSU-1]
gi|118586271|ref|ZP_01543727.1| aspartate racemase [Oenococcus oeni ATCC BAA-1163]
gi|419857687|ref|ZP_14380391.1| aspartate racemase [Oenococcus oeni AWRIB202]
gi|421185472|ref|ZP_15642883.1| aspartate racemase [Oenococcus oeni AWRIB318]
gi|421186274|ref|ZP_15643667.1| aspartate racemase [Oenococcus oeni AWRIB418]
gi|421188950|ref|ZP_15646282.1| aspartate racemase [Oenococcus oeni AWRIB419]
gi|116091798|gb|ABJ56952.1| aspartate racemase [Oenococcus oeni PSU-1]
gi|118433287|gb|EAV39997.1| aspartate racemase [Oenococcus oeni ATCC BAA-1163]
gi|399964283|gb|EJN98937.1| aspartate racemase [Oenococcus oeni AWRIB419]
gi|399964653|gb|EJN99294.1| aspartate racemase [Oenococcus oeni AWRIB318]
gi|399967227|gb|EJO01709.1| aspartate racemase [Oenococcus oeni AWRIB418]
gi|410497464|gb|EKP88937.1| aspartate racemase [Oenococcus oeni AWRIB202]
Length = 233
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 107/249 (42%), Gaps = 25/249 (10%)
Query: 84 GIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSH----DRSSFSSLNCK 139
GI+GG +T N + L +L+ +D FL N + +H DR+++ K
Sbjct: 6 GILGGMGTMATENFVRTLDRLTEAHSDQNFL-------NYLVFNHACIPDRTAYIFDRTK 58
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
+ + E++++ L A +V+ C+ +H + E+ +P L++
Sbjct: 59 DNPL----PFLKEDIQQ----LNSLSADFVVITCNTAHYFLPELTAIAKMPILNMPSLAV 110
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
+ K+ AG+ L+I +LA + + +G YQEK+ + + ++PDK +
Sbjct: 111 QACKKRT-----AGT-LKISILATDGTIASGLYQEKISAQSDQAIIPDKELQIQVMKFIY 164
Query: 260 DALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALAR 319
+ + + A + ++L+ + + VIL + + + + ID LA
Sbjct: 165 QDIKQNNRIEADKYHHLVEKLLIKQKCDYVILGCTEFSVAQEREPYISDRVIDAQQVLAN 224
Query: 320 STIKWVKSA 328
+ + K++
Sbjct: 225 TAVSMAKNS 233
>gi|425736659|ref|ZP_18854959.1| aspartate racemase [Brevibacterium casei S18]
gi|425477914|gb|EKU45127.1| aspartate racemase [Brevibacterium casei S18]
Length = 226
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 16/173 (9%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
L GA + + +L H V VP +H+ + +A K+ L V
Sbjct: 62 LAAGGAEAVAIATNLMHKTAPTVEAEVDVPLIHIVDSIAAMAKDRGYSTL--------AV 113
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKAT---MEHTLIPALDALNRKDVEGARNLLRIA 277
L + GFY E+L+ +G ++PD+AT ++ + L D AR +
Sbjct: 114 LGTKWTMLDGFYTERLEAQGITTLIPDEATCLEVDRIIWDELTQGRFTDASRARYIE--I 171
Query: 278 LQVLLVRAVNTVILASDDMQDLLPPD-DPLLKKCIDPMDALARSTIKWVKSAE 329
++ L R + V L+ ++ L+PP+ PL ID +DA + ++W+ + E
Sbjct: 172 MESLADRGADAVALSCTEIGLLVPPEVAPL--PAIDSVDAHVAAIVEWMMADE 222
>gi|45358302|ref|NP_987859.1| Asp/Glu racemase:aspartate racemase [Methanococcus maripaludis S2]
gi|44921060|emb|CAF30295.1| Asp/Glu racemase:Aspartate racemase [Methanococcus maripaludis S2]
Length = 234
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 77/171 (45%), Gaps = 30/171 (17%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPF----LLCSDPLLNKELLSHDRSSFSSLN 137
T+G++GG S +ST + Q ++ P +L S + LSHD
Sbjct: 3 TIGLIGGLSWESTQEYYRIINQSIRDKLGAPHSAKCILYSVDFAEFDKLSHDEEW----- 57
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
+I E L LEKAGA I++ + H D V + ++P +H+ +
Sbjct: 58 ----------DVIAEKLTDIAKTLEKAGAEGILICTNTMHTVADSVSENINIPLVHIVDA 107
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKL--QHEGFEVVLP 246
VA+++K+ N+K ++G+L + FY +L +HE +V++P
Sbjct: 108 VAEDIKQKNIK--------KVGLLGTKFTMEQEFYSGRLKEKHE-IDVIIP 149
>gi|418975860|ref|ZP_13523757.1| aspartate racemase [Streptococcus oralis SK1074]
gi|383347009|gb|EID25015.1| aspartate racemase [Streptococcus oralis SK1074]
Length = 230
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE+AGA IV+ + H ++ + ++P LH++ A+ L ++ ++G+
Sbjct: 71 LEQAGADFIVICTNTMHKVAPQIQEKITIPVLHIAVATAQALLADGIQ--------KVGL 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
L +T FY+EKL G EV++PD+A
Sbjct: 123 LGTKYTMTQDFYKEKLIESGLEVLIPDQA 151
>gi|206560577|ref|YP_002231342.1| putative racemase [Burkholderia cenocepacia J2315]
gi|444356909|ref|ZP_21158513.1| aspartate racemase [Burkholderia cenocepacia BC7]
gi|444370005|ref|ZP_21169703.1| aspartate racemase [Burkholderia cenocepacia K56-2Valvano]
gi|198036619|emb|CAR52516.1| putative racemase [Burkholderia cenocepacia J2315]
gi|443598212|gb|ELT66589.1| aspartate racemase [Burkholderia cenocepacia K56-2Valvano]
gi|443606847|gb|ELT74596.1| aspartate racemase [Burkholderia cenocepacia BC7]
Length = 230
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 107/252 (42%), Gaps = 34/252 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQ----LSGEENDFPFLLCSDPLLNKELL--SHDRSSFS 134
T+G++GG S +S+ + + L G ++ +L + + E L +HD ++
Sbjct: 2 KTIGLIGGMSWESSAEYYRMINRHSKALHGGHHNAKSVLVTVDFADIEALQRTHDWAAL- 60
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
G ++ D+ R+ LE AGA +V+ + H HD + ++PFLH+
Sbjct: 61 -------GERMADAA------RQ---LEAAGADLVVLTTNTMHRVHDAIEAAVTLPFLHI 104
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEH 253
++ L+ A ++ R+ +L + FY +L+ + G +V++PD+ +
Sbjct: 105 ADPTGSALRAAGVE--------RVALLGTRYTMELPFYAARLREKFGLDVLVPDEPGRDD 156
Query: 254 TLIPALDALNRKDVEGARNLLRIA-LQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCID 312
D L + ++ + L R VIL ++ L+ DD L D
Sbjct: 157 VHRIIYDELCHGVISAQSRATYVSIIDALATRGAQAVILGCTEITLLIGADDSPL-PVFD 215
Query: 313 PMDALARSTIKW 324
A++ ++W
Sbjct: 216 TTALHAKAAVEW 227
>gi|300770584|ref|ZP_07080463.1| aspartate racemase [Sphingobacterium spiritivorum ATCC 33861]
gi|300763060|gb|EFK59877.1| aspartate racemase [Sphingobacterium spiritivorum ATCC 33861]
Length = 247
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 101/259 (38%), Gaps = 36/259 (13%)
Query: 83 VGIVGGASVDSTLNLLGKLVQ---LSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+GIVGG+ + L L+ K+++ S +++ P LL S P DR+ + N +
Sbjct: 2 IGIVGGSRPLAGLELIKKILEETIASTDQDHLPVLLSSQPHRIA-----DRTQYLLDNTR 56
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSH-------IWHDEVCKGCSVPFL 192
+I E LE++GA + +PCH +H I ++ K V L
Sbjct: 57 TNPAYAIAEIISE--------LEQSGATVVGIPCHTAHAVPIFDIIRYELQKKEHKVRLL 108
Query: 193 HVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
H+ E + + P+ +G+L I G Y +G +V+ P + E
Sbjct: 109 HMVEETSDYIAAHFTAPV-------VGILTTTGIRNTGLYNHVFAAKGLKVIQPPEEWQE 161
Query: 253 ------HTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPL 306
H + A + A+ L A+ L +IL ++ L +
Sbjct: 162 KIQAAIHDEQYGIKASSSPVTNRAKEELVAAIHELKKEGATVIILGCTELSGALREKEIS 221
Query: 307 LKKCIDPMDALARSTIKWV 325
+DP LAR+ I+ V
Sbjct: 222 GLPLVDPNRILARALIRTV 240
>gi|421598069|ref|ZP_16041565.1| aspartate racemase [Bradyrhizobium sp. CCGE-LA001]
gi|404269822|gb|EJZ34006.1| aspartate racemase [Bradyrhizobium sp. CCGE-LA001]
Length = 295
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 89/214 (41%), Gaps = 47/214 (21%)
Query: 73 SDALLNQANTVGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHD 129
S L + +G+VGG +T L L + E D PF+ S P ++ D
Sbjct: 44 SAGTLGRRRPLGVVGGMGSLATAKFLESLARKRQAEKDQDHIPFVALSLPDIS------D 97
Query: 130 RSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSV 189
RS S + D+ + + + R +LE+AG I +PC+ +H W E+ + S+
Sbjct: 98 RSQAIS--------EGSDAPLRQIVARAH-WLEQAGCGAIAIPCNTAHFWVGEIKRALSI 148
Query: 190 PFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
+ V+E AK++ +MK E E ++L KA
Sbjct: 149 DLIDVTEITAKKI--CDMKNDEI-------------------------REFRSILLGTKA 181
Query: 250 TMEHTLIPALD--ALNRKDVEGARNLLRIALQVL 281
TM+H+L P + + V + L R A+Q++
Sbjct: 182 TMQHSLYPQTNETSFGEGFVRCRKRLQREAIQII 215
>gi|187921369|ref|YP_001890401.1| aspartate racemase [Burkholderia phytofirmans PsJN]
gi|187719807|gb|ACD21030.1| aspartate racemase [Burkholderia phytofirmans PsJN]
Length = 497
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 22/174 (12%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLR-IG 219
LE A I +PC+ +H + + + S+P +++ + L+E LR +G
Sbjct: 314 LESGDADLIAIPCNTAHAFVERIQPYLSIPIVNMLTVTVRHLRETY-------PALRSVG 366
Query: 220 VLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNL------ 273
VLA + + +G Y++ L+ EG +P +A ++ ++ A+ K V+
Sbjct: 367 VLATSGTIASGVYEKALESEGLRQTVP-RAELQARVMEAI--YGNKGVKAGFTTGQCLDD 423
Query: 274 LRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLK-----KCIDPMDALARSTI 322
+ A+ L+ V +IL ++ LLP + +DP D LAR +
Sbjct: 424 ISAAIDGLVAEGVEVIILGCTELPLLLPKQSFVGTTGARVSLVDPTDVLARQCV 477
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
EK G +V+PC LSH + DE+ + + + E V ++ + + RIGV
Sbjct: 76 FEKRGVTTVVLPCFLSHTFIDELKANSPLQIVDMVEAVRSHVRR------KFPTARRIGV 129
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP 246
L + G +++ FEV+ P
Sbjct: 130 LTSDFTRRKGLFEKYFATPEFEVIHP 155
>gi|373116604|ref|ZP_09530756.1| aspartate racemase [Lachnospiraceae bacterium 7_1_58FAA]
gi|371669171|gb|EHO34274.1| aspartate racemase [Lachnospiraceae bacterium 7_1_58FAA]
Length = 234
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 88/217 (40%), Gaps = 26/217 (11%)
Query: 83 VGIVGGASVDSTLNLLGKLVQ---LSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+GI+GG +T + +++ S ++ P L+ SD + DR++
Sbjct: 6 LGILGGMGPQATQDFYQRILDRTDASCDQEHLPTLIWSDTSMP------DRTA----AIL 55
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
GG + +++ R LE+ G + +PC+ SH + D + ++P +H
Sbjct: 56 GGDAEGCYRRLLDGAR----LLERGGCTALAIPCNTSHYFADRLQGDIAIPLIH------ 105
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
+ + L A R+G+LA + + G YQ + G E V P + +
Sbjct: 106 --MPRETVAVLAADGKKRVGILATDGTVQTGIYQRECAARGIEAVAPPADVQKLVMSIIY 163
Query: 260 DALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
D + R + +G+R + L + IL ++
Sbjct: 164 DEIKRGE-KGSREKFAAIDRWLRASGCDAAILGCTEL 199
>gi|319652508|ref|ZP_08006623.1| aspartate racemase [Bacillus sp. 2_A_57_CT2]
gi|317395762|gb|EFV76485.1| aspartate racemase [Bacillus sp. 2_A_57_CT2]
Length = 240
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 72/150 (48%), Gaps = 17/150 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LEK GA I++ + H ++ ++P LH+++ A ++K+ +K +G+
Sbjct: 82 LEKGGADFIIICTNTMHKVIGDIQSKINIPILHIADATAAQIKKKGIKS--------VGL 133
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATME--HTLIPA---LDALNRKDVEGARNLLR 275
L + FY+ +L+ G +V++P+ E + +I L +++K +R+ +
Sbjct: 134 LGTRYTMEEDFYKSRLEFNGIQVIVPNDNEREIINKIIYEELCLGKIHQK----SRDYYK 189
Query: 276 IALQVLLVRAVNTVILASDDMQDLLPPDDP 305
+Q L+ +IL ++ L+ P+D
Sbjct: 190 KVIQGLIKSGAKGIILGCTEIGLLVKPEDS 219
>gi|163942483|ref|YP_001647367.1| aspartate racemase [Bacillus weihenstephanensis KBAB4]
gi|423519443|ref|ZP_17495924.1| aspartate racemase [Bacillus cereus HuA2-4]
gi|163864680|gb|ABY45739.1| aspartate racemase [Bacillus weihenstephanensis KBAB4]
gi|401158462|gb|EJQ65853.1| aspartate racemase [Bacillus cereus HuA2-4]
Length = 224
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 77/163 (47%), Gaps = 18/163 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE G I MPC+ +H++ +E+ + ++P L++ + K + E N K R+ +
Sbjct: 70 LESTGVDFIAMPCNTAHLYFEELQRSITIPILNIVDETLKAIPE-NTK--------RVAL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQV 280
LA A + A YQ+ + E + ++ + + + + ++E AR L + L +
Sbjct: 121 LATEATVQASIYQDGITKRDIEYIHNEQ--WQEMINQIITCIKGGEIEEARKLWSL-LVL 177
Query: 281 LLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIK 323
L V+T I+A D+ ++ D +D LA++ ++
Sbjct: 178 QLKDEVDTAIIACTDLNVVVSED------FVDSAQCLAKAVVR 214
>gi|289423113|ref|ZP_06424928.1| aspartate racemase [Peptostreptococcus anaerobius 653-L]
gi|289156444|gb|EFD05094.1| aspartate racemase [Peptostreptococcus anaerobius 653-L]
Length = 240
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 80/170 (47%), Gaps = 27/170 (15%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGG 141
T+G++GG +T+ +V+++ + D + D ++ + DR+++
Sbjct: 6 TIGVLGGLGPMATVYFYDLMVEMTDAKCDQDHV---DMIIVNRASTPDRTAYIV------ 56
Query: 142 GVQLDDS---LIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV-SEC 197
Q DDS I+E+ +R LE G +V+ C+ +H ++D++ +VP L++ E
Sbjct: 57 -GQSDDSPLDYIIEDAKR----LEACGVDFMVLTCNTAHYFYDKIKDSINVPILNMLEET 111
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD 247
V +K+ + K IG++A + G YQ Q +G + + D
Sbjct: 112 VGHAIKKGHKK---------IGIMATTGNIKTGLYQSMCQSKGVDYYILD 152
>gi|229828743|ref|ZP_04454812.1| hypothetical protein GCWU000342_00809 [Shuttleworthia satelles DSM
14600]
gi|229793337|gb|EEP29451.1| hypothetical protein GCWU000342_00809 [Shuttleworthia satelles DSM
14600]
Length = 237
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 10/179 (5%)
Query: 146 DDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEA 205
D+ + E L + LE G I +PC+ SH + D + +VP +H+ L +A
Sbjct: 61 DEGPVEERLLKDCKILETCGCSAIAIPCNTSHYFADRLQDQLTVPIIHMPRRTVLRLADA 120
Query: 206 NMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRK 265
K ++ +LA + + G Y++ L+ G PD T + + D +
Sbjct: 121 GKK--------KVAILATDGTIVTGVYRKALEAAGIVAYEPDSQTQKKVMSLIYDEIKAG 172
Query: 266 DVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIKW 324
+ +G R+ + + + IL ++ + L ID M+ LA IK+
Sbjct: 173 E-KGNRHTFAAIDRAVREAGCDGAILGCTELS-VYREYHGLSSFYIDAMEVLAEECIKF 229
>gi|221214797|ref|ZP_03587766.1| aspartate racemase [Burkholderia multivorans CGD1]
gi|421476109|ref|ZP_15924022.1| aspartate racemase [Burkholderia multivorans CF2]
gi|221165336|gb|EED97813.1| aspartate racemase [Burkholderia multivorans CGD1]
gi|400228950|gb|EJO58835.1| aspartate racemase [Burkholderia multivorans CF2]
Length = 230
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE AGA +V+ + H HD + ++PFLH+++ L++A ++ R+ +
Sbjct: 71 LEAAGADLVVLTTNTMHRVHDAIEAAITLPFLHIADPTGAALRDAGVE--------RVAL 122
Query: 221 LAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEHTLIPALDALNRKDV--EGARNLLRIA 277
L + FY ++L+ G +V++PD+ D L V E +RI
Sbjct: 123 LGTRYTMELPFYAQRLRERFGIDVLVPDERERADVHRIIYDELCHGIVARESRAAYVRI- 181
Query: 278 LQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIKW 324
++ L R VIL ++ L+ DD L D A++ ++W
Sbjct: 182 IESLAQRGAQAVILGCTEITLLIGADDSPL-PVFDTTALHAKAAVEW 227
>gi|429727313|ref|ZP_19262087.1| aspartate racemase [Peptostreptococcus anaerobius VPI 4330]
gi|429152765|gb|EKX95575.1| aspartate racemase [Peptostreptococcus anaerobius VPI 4330]
Length = 245
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 80/170 (47%), Gaps = 27/170 (15%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGG 141
T+G++GG +T+ +V+++ + D + D ++ + DR+++
Sbjct: 11 TIGVLGGLGPMATVYFYDLMVEMTDAKCDQDHV---DMIIVNRASTPDRTAYIV------ 61
Query: 142 GVQLDDS---LIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV-SEC 197
Q DDS I+E+ +R LE G +V+ C+ +H ++D++ +VP L++ E
Sbjct: 62 -GQSDDSPLDYIIEDAKR----LEACGVDFMVLTCNTAHYFYDKIKDSINVPILNMLEET 116
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD 247
V +K+ + K IG++A + G YQ Q +G + + D
Sbjct: 117 VGHAIKKGHKK---------IGIMATTGNIKTGLYQSMCQSKGVDYYILD 157
>gi|423391500|ref|ZP_17368726.1| aspartate racemase [Bacillus cereus BAG1X1-3]
gi|401637333|gb|EJS55086.1| aspartate racemase [Bacillus cereus BAG1X1-3]
Length = 236
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 72/152 (47%), Gaps = 17/152 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LEK GA I++ + H + S+P LH+++ AKE+K+ ++ +G+
Sbjct: 71 LEKGGADFIIVCTNTMHKVIKHIKNRISIPILHIADATAKEIKQQGIQS--------VGL 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEHTLIPA--LDALNRKDVEGARNLLR 275
L + FY+ +++ +V++P D+ T+ + L +N++ +R +
Sbjct: 123 LGTKYTMEQDFYKLRIEENDIKVIVPTEEDRETVNKIIYNELCLGKINQQ----SREYFK 178
Query: 276 IALQVLLVRAVNTVILASDDMQDLLPPDDPLL 307
++ L+ R +IL ++ L+ +D L+
Sbjct: 179 SVMEDLVQRGAKGIILGCTEIGLLVKQEDSLV 210
>gi|209963768|ref|YP_002296683.1| aspartate racemase [Rhodospirillum centenum SW]
gi|209957234|gb|ACI97870.1| aspartate racemase, putative [Rhodospirillum centenum SW]
Length = 232
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 26/228 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +ST + +L L+G D L S LL LLS D + ++L +G
Sbjct: 2 RTLGLIGGMSWEST-AVYYRL--LNGMVRDRLGGLHSARLL---LLSVDFAEIAALQAEG 55
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
S++ E + L GA +++ + H+ V + +P +H+++ A
Sbjct: 56 -----RWSVLTERMVDAGRHLRAGGAEALLICTNTMHLMAAAVEEAAGLPLIHIADTTAA 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEHTLIP 257
++A ++ PL +LA + FY E+L G E ++P D+ T+ H +I
Sbjct: 111 ACRKAGVR-----RPL---LLATRYTMEHPFYAERLHRHGLEPLVPGPEDRTTI-HRII- 160
Query: 258 ALDALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
+ L R ++ E +R R ++ + + VIL ++ L+ +D
Sbjct: 161 -YEELCRGEIREDSRAAYRAVIERMRAEGADGVILGCTEIGLLIRQED 207
>gi|157375863|ref|YP_001474463.1| hypothetical protein Ssed_2728 [Shewanella sediminis HAW-EB3]
gi|157318237|gb|ABV37335.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3]
Length = 230
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 95/227 (41%), Gaps = 21/227 (9%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +ST++ L + G + + L + L+S D + L G
Sbjct: 2 KTIGMIGGMSWESTVSYYKALNE--GVKQNLGGLHSA----KIALVSVDFAEIERLQHSG 55
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
+ D L V +E AGA ++ + H DE+ S+P LH+++ A+
Sbjct: 56 EWGKTADIL-----SDAAVSVEAAGADFFMICTNTMHKVADEISAKVSIPLLHIADATAE 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEHTLIPAL 259
+L +K ++G+L + FY+ +L G EVV+PD A E
Sbjct: 111 QLVSDGVK--------KVGLLGTQFTMEQEFYRGRLTDRFGIEVVIPDSAQRERVHQIIY 162
Query: 260 DALNRKDVE-GARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDP 305
+ L + V +R +Q L + VIL ++ L+ D
Sbjct: 163 EELCQGQVNTTSREAYLAIIQDLQAQGAEAVILGCTEIALLVSQQDT 209
>gi|451964716|ref|ZP_21917978.1| putative amino acid racemase [Edwardsiella tarda NBRC 105688]
gi|451316293|dbj|GAC63340.1| putative amino acid racemase [Edwardsiella tarda NBRC 105688]
Length = 230
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 100/228 (43%), Gaps = 25/228 (10%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +S+ +++ E+ P S L S + + +L +G
Sbjct: 2 KTIGLLGGMSWESSAEYY-RIINQGVREHLGPTASAS-----VVLWSFNFAEIEALQHQG 55
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
D S + E + L+ AGA +++ + H + S+P +H+++ A
Sbjct: 56 -----DWSTLSERMVDAAQRLQGAGADVLLICTNTMHRMAPALESALSIPLIHIADPTAA 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKL-QHEGFEVVLP---DKATMEHTLI 256
+K A ++ ++G+L + FY+ +L + G EV++P D+AT+ H +
Sbjct: 111 AIKAAGLR--------KVGLLGTAFTMEQDFYKGRLRERHGLEVIVPEADDRATVHHIIY 162
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
L A + +R R + L+ VIL ++ L+ P+D
Sbjct: 163 DELVA--GQITPSSRAAYRQVIARLVQAGAEAVILGCTEIMLLVQPED 208
>gi|402814946|ref|ZP_10864539.1| hypothetical protein PAV_3c02870 [Paenibacillus alvei DSM 29]
gi|402507317|gb|EJW17839.1| hypothetical protein PAV_3c02870 [Paenibacillus alvei DSM 29]
Length = 233
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 66/145 (45%), Gaps = 9/145 (6%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LEK GA I++ + H D + ++P +H+++ A +KE ++ +G+
Sbjct: 71 LEKGGADFIIICTNTMHKVIDNIQSKINIPIVHIADATASRIKENGLRT--------VGL 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDV-EGARNLLRIALQ 279
L + FY+ +L+ G +V++P EH + L + + +R+ + +
Sbjct: 123 LGTKYTMEQDFYKARLELNGIKVIVPHATEREHINKIIYEELCLGKIHQESRDYYKRVIH 182
Query: 280 VLLVRAVNTVILASDDMQDLLPPDD 304
L+ +IL ++ L+ P+D
Sbjct: 183 GLIKMGAEGIILGCTEIGLLVKPED 207
>gi|406977427|gb|EKD99590.1| hypothetical protein ACD_22C00226G0002 [uncultured bacterium]
Length = 237
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 114/257 (44%), Gaps = 35/257 (13%)
Query: 77 LNQANT--VGIVGGASVDSTLNLLGKLVQLS----GEEN--DFP-FLLCSDPLLNKELLS 127
+NQ N VGI+GG +T + GK++ LS G +N D+P L+ S P+
Sbjct: 1 MNQKNNKKVGIIGGVGPQATQFIYGKIIDLSQSKYGAKNNDDYPQILIESVPV------- 53
Query: 128 HDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGC 187
F S + ++ +++++++ L AGA + + + HI +E+ K
Sbjct: 54 ---PDFISDTSR---IEEAKEMLIKSVQS----LTNAGATRLCIGSNTVHILLEELKKIT 103
Query: 188 SVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD 247
V F+ + E VAK+ + ++G+L ++ +G Y+++L++ G E+VLP
Sbjct: 104 EVEFISMIELVAKKCVKHGFN--------KVGLLGTPVLVKSGLYEQELKNSGVELVLPT 155
Query: 248 KATMEHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLL 307
+ +E D L + ++ AL L R ++L ++ L + L
Sbjct: 156 EDEIEIADSIIRDVLAGQKAFDKKHEYIGALNDLFSRGAQAIVLGCTELP-LAINYEALG 214
Query: 308 KKCIDPMDALARSTIKW 324
+ I + LA + +
Sbjct: 215 NRTISSDEVLAEGIVDY 231
>gi|229017533|ref|ZP_04174433.1| hypothetical protein bcere0030_20860 [Bacillus cereus AH1273]
gi|229023751|ref|ZP_04180240.1| hypothetical protein bcere0029_20840 [Bacillus cereus AH1272]
gi|228737548|gb|EEL88055.1| hypothetical protein bcere0029_20840 [Bacillus cereus AH1272]
gi|228743758|gb|EEL93860.1| hypothetical protein bcere0030_20860 [Bacillus cereus AH1273]
Length = 236
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 72/152 (47%), Gaps = 17/152 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LEK GA I++ + H + S+P LH+++ AKE+K+ ++ +G+
Sbjct: 71 LEKGGADFIIVCTNTMHKVIKHIKNRISIPILHIADATAKEIKQQGIQS--------VGL 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEHTLIPA--LDALNRKDVEGARNLLR 275
L + FY+ +++ +V++P D+ T+ + L +N++ +R +
Sbjct: 123 LGTKYTMEQDFYKLRIEENDIKVIVPTEEDRETVNKIIYNELCLGKINQQ----SREYFK 178
Query: 276 IALQVLLVRAVNTVILASDDMQDLLPPDDPLL 307
++ L+ R +IL ++ L+ +D L+
Sbjct: 179 SVMEDLVQRGAKGIILGCTEIGLLVKQEDSLV 210
>gi|75763381|ref|ZP_00743116.1| Aspartate racemase [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|74489131|gb|EAO52612.1| Aspartate racemase [Bacillus thuringiensis serovar israelensis ATCC
35646]
Length = 235
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%), Gaps = 12/136 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE G I MPC+ +H++ +E+ + S+P L++ + + + E N K R+ +
Sbjct: 81 LESTGVSFIAMPCNTAHLYFEELQRSLSIPILNIVDETLQAIPE-NTK--------RVAL 131
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQV 280
LA A + A YQ+ + E + +K + ++ + + ++E AR L L +
Sbjct: 132 LATEATVQARIYQDGIAKRNIEYIHHEK--WQESINQIITCIKSGEIEEARELWN-TLVL 188
Query: 281 LLVRAVNTVILASDDM 296
L ++T I+A D+
Sbjct: 189 QLRDEIDTAIIACTDL 204
>gi|449051794|ref|ZP_21732067.1| racemase [Klebsiella pneumoniae hvKP1]
gi|448876160|gb|EMB11158.1| racemase [Klebsiella pneumoniae hvKP1]
Length = 237
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 30/173 (17%)
Query: 81 NTVGIVGGASVDSTLNLL-----GKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSS 135
T+G++GG S +ST+ G +L G L S L+ + HD +
Sbjct: 2 KTIGLLGGMSWESTIPYYRLINEGVKARLGG--------LHSASLVLHSVDFHDIEA--- 50
Query: 136 LNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195
C+ G D E L V L++AGA IV+ + H D + C VPFLH++
Sbjct: 51 --CQSAG---DWDRAGEILAEAAVGLQQAGAEGIVLCTNTMHKVADAIAARCQVPFLHIA 105
Query: 196 ECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPD 247
+ + + + R+ +L + FY+++LQ + E ++P+
Sbjct: 106 DATGRAIAAKGQR--------RVALLGTRYTMEQTFYRDRLQEQFAIETLIPE 150
>gi|196032953|ref|ZP_03100366.1| probable amino-acid racemase [Bacillus cereus W]
gi|195994382|gb|EDX58337.1| probable amino-acid racemase [Bacillus cereus W]
Length = 224
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 105/250 (42%), Gaps = 46/250 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLV----QLSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V + G ++D FP ++ C P + H+
Sbjct: 2 IGILAGMGPKSTGPFVDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK- 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
I+E ++ LE GA I MPC+ +H++ +E+ + S+P L+
Sbjct: 61 --------------KAIIEGAQK----LESTGASFIAMPCNTAHLYFEELQQSLSIPILN 102
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + K + E + R+ +LA A + A YQ+ + + + ++ +
Sbjct: 103 IVDETLKAIPE---------TAKRVALLATEATVRAEIYQDGIAKRNIDYIYYEQ--WQE 151
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDP 313
++ + + +V+ A L AL + L V+T I+A D+ + D +D
Sbjct: 152 SINQIITYIKSGEVKEAHRLWD-ALVLQLKDEVDTAIIACTDLNVVANED------FVDS 204
Query: 314 MDALARSTIK 323
LA++ +K
Sbjct: 205 AQCLAKAVVK 214
>gi|423419795|ref|ZP_17396884.1| aspartate racemase [Bacillus cereus BAG3X2-1]
gi|401103827|gb|EJQ11806.1| aspartate racemase [Bacillus cereus BAG3X2-1]
Length = 236
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 72/152 (47%), Gaps = 17/152 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LEK GA I++ + H + S+P LH+++ AKE+K+ ++ +G+
Sbjct: 71 LEKGGADFIIVCTNTMHKVIKHIKNRISIPILHIADATAKEIKQQGIQS--------VGL 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEHTLIPA--LDALNRKDVEGARNLLR 275
L + FY+ +++ +V++P D+ T+ + L +N++ +R +
Sbjct: 123 LGTKYTMEQDFYKLRIEENDIKVIVPTEEDRETVNKIIYNELCLGKINQQ----SREYFK 178
Query: 276 IALQVLLVRAVNTVILASDDMQDLLPPDDPLL 307
++ L+ R +IL ++ L+ +D L+
Sbjct: 179 SVMKDLVQRGAKGIILGCTEIGLLVKQEDSLV 210
>gi|81427712|ref|YP_394710.1| aspartate racemase [Lactobacillus sakei subsp. sakei 23K]
gi|78609352|emb|CAI54398.1| Aspartate racemase [Lactobacillus sakei subsp. sakei 23K]
Length = 238
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 85/188 (45%), Gaps = 33/188 (17%)
Query: 75 ALLNQANTV-GIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSH----D 129
A + Q TV G +G A+ +S + LL + + +++ LN +++H D
Sbjct: 3 ATMKQFFTVLGGMGTAATESYIRLLNQRTPTTKDQD----------FLNYIVVNHATIPD 52
Query: 130 RSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSV 189
RS++ + + + ++E+++++ + V+ C+ +H ++D++ S
Sbjct: 53 RSTYLMDHSQPSP----EPDLLEDIQQQSLL----KPAFFVIACNTAHYFYDDLQAAASA 104
Query: 190 PFLHVSECVAKELKEANMKPLEAGSP--LRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD 247
P +H + +K ++ P RIG+L +T G Y E L EG+EVV P
Sbjct: 105 PIVH--------MPRETVKSIQTTYPDAKRIGILGTKGTVTDGIYDEALLAEGYEVVKPS 156
Query: 248 KATMEHTL 255
E T+
Sbjct: 157 LDLQERTM 164
>gi|399031288|ref|ZP_10731355.1| aspartate racemase [Flavobacterium sp. CF136]
gi|398070411|gb|EJL61712.1| aspartate racemase [Flavobacterium sp. CF136]
Length = 230
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 85/168 (50%), Gaps = 20/168 (11%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGG 141
T+G++GG S +S+ L +++ G + + LL S D + + L +G
Sbjct: 3 TIGLIGGMSWESS-ALYYQIIN-RGIQEKLGGVHSGKSLL----YSVDFNEIAILQKEGN 56
Query: 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
+L L++E ++ LEK GA IV+ + H DE+ K S+P LH+ + A+E
Sbjct: 57 WEKLG-QLMIEAAQK----LEKGGADFIVLCTNTMHKLSDEIEKNVSIPLLHIVDAAAEE 111
Query: 202 LKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDK 248
+ + N+K +IG+L + + F++++L ++ E ++P++
Sbjct: 112 IVKDNIK--------KIGLLGTSFTMEQTFFKDRLLYKHKIETIIPNE 151
>gi|424922936|ref|ZP_18346297.1| aspartate racemase [Pseudomonas fluorescens R124]
gi|404304096|gb|EJZ58058.1| aspartate racemase [Pseudomonas fluorescens R124]
Length = 230
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 75/165 (45%), Gaps = 10/165 (6%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE GA C+V+ + H +++ S+PFLH++E A+ + + +G+
Sbjct: 71 LEAGGAECVVLCTNTMHKVAEQIQAAISIPFLHIAEPAAQAALDIDAHT--------VGL 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDV-EGARNLLRIALQ 279
L + F +++L +G V++PD A + D L + + +R + + ++
Sbjct: 123 LGTAFTMEQDFLKQRLIAQGLTVLVPDDAERKDVHRIIYDELCVGVISDESRQIYQRVIE 182
Query: 280 VLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIKW 324
L R +IL ++ LL P+ L +D + A+S + +
Sbjct: 183 TLTARGAQAIILGCTEIGLLLKPEHSAL-PLLDTTELHAQSAVAF 226
>gi|228903273|ref|ZP_04067405.1| amino-acid racemase [Bacillus thuringiensis IBL 4222]
gi|434377905|ref|YP_006612549.1| aspartate racemase [Bacillus thuringiensis HD-789]
gi|228856374|gb|EEN00902.1| amino-acid racemase [Bacillus thuringiensis IBL 4222]
gi|401876462|gb|AFQ28629.1| aspartate racemase [Bacillus thuringiensis HD-789]
Length = 224
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%), Gaps = 12/136 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE G I MPC+ +H++ +E+ + S+P L++ + + + E N K R+ +
Sbjct: 70 LESTGVSFIAMPCNTAHLYFEELQRSLSIPILNIVDETLQAIPE-NTK--------RVAL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQV 280
LA A + A YQ+ + E + +K + ++ + + ++E AR L L +
Sbjct: 121 LATEATVQARIYQDGIAKRNIEYIHHEK--WQESINQIITCIKSGEIEEARELWN-TLVL 177
Query: 281 LLVRAVNTVILASDDM 296
L ++T I+A D+
Sbjct: 178 QLRDEIDTAIIACTDL 193
>gi|251797250|ref|YP_003011981.1| aspartate racemase [Paenibacillus sp. JDR-2]
gi|247544876|gb|ACT01895.1| aspartate racemase [Paenibacillus sp. JDR-2]
Length = 240
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 114/259 (44%), Gaps = 30/259 (11%)
Query: 79 QANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSH----DRSSFS 134
+ ++G++GG +T +++ + + D +N +L+H DR+
Sbjct: 2 EHGSLGVIGGMGPKATSVFFERIINKTNADTD-------QNHINIVILNHTSLPDRTDV- 53
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
L K G + LD + + L AG I +PC+ +H +++E+ + ++P +++
Sbjct: 54 -LRKKEGDLFLD------KISKDMALLHDAGVSNIAIPCNTAHCFYNEMQEMTTIPIINM 106
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHT 254
V + LK + + GS ++G+LA + L G Y E+ ++ ++ P++ +
Sbjct: 107 ---VNETLK---LVADKFGSGSKVGILATDGTLHNGIYSEECENLKLKLYKPNEEIQKRI 160
Query: 255 LIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPM 314
+ L + + I ++L + ++A ++ +P + + CID +
Sbjct: 161 MSIIYKKLKKNQHVNPAEIEEIIEKLLSDFGCDCAVIACTELSS-IPLRKNIKRYCIDAL 219
Query: 315 DALARSTI----KWVKSAE 329
D L +I K VK+ +
Sbjct: 220 DVLVEQSILRSGKRVKATD 238
>gi|395795036|ref|ZP_10474349.1| aspartate racemase [Pseudomonas sp. Ag1]
gi|395340860|gb|EJF72688.1| aspartate racemase [Pseudomonas sp. Ag1]
Length = 231
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 99/231 (42%), Gaps = 23/231 (9%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +S+ + Q ++ PL + +LL + +
Sbjct: 2 RTIGLIGGMSWESSAEYYRIINQNVRDQ--------LGPLRSAQLLMYSVDFGPVEQAQH 53
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
G D +LI+E+ R+ L+ GA CIV+ + H+ ++ S+PFLH+++
Sbjct: 54 AGRWDDAALILEDAARR---LQAGGAECIVLCTNTMHLVAPQIEAAVSIPFLHIADAAGA 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALD 260
EA L +G+L + F + +L +G V++PD + +
Sbjct: 111 AAVEAG--------TLSVGLLGTAFTMEQEFLKSRLAAQGLTVLVPDAEERQAVHRIIYE 162
Query: 261 ALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPP---DDPLL 307
L + + +R + + ++ L R +IL ++ L+ P D PLL
Sbjct: 163 ELCVGVISDASREVYQRVIESLAARGAQAIILGCTEISLLIKPQHSDLPLL 213
>gi|407364667|ref|ZP_11111199.1| aspartate racemase [Pseudomonas mandelii JR-1]
Length = 230
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 107/235 (45%), Gaps = 31/235 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +S+ +L+ + PL + +LL + F +
Sbjct: 2 RTIGLIGGMSWESSAEYY-RLINQQVRDR-------LGPLRSAKLLMYS-VDFGPVEQAQ 52
Query: 141 GGVQLDDS--LIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
+ DD+ ++V+ +R L+ GA C+V+ + H ++ S+PFLH+++
Sbjct: 53 HAGRWDDAAAILVDAAQR----LQAGGAECVVLCTNTMHKVAGQIQAAISIPFLHIADPT 108
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD--KATMEHTLI 256
+ +EAG+ L++G+L + F +++L G V++PD + H +I
Sbjct: 109 GQ-------AAVEAGT-LKVGLLGTAFTMEQDFLKDRLSATGLTVLVPDAEERNAVHRII 160
Query: 257 PALDALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD---PLL 307
D L + E +R + + ++ L R +IL ++ L+ P+ PLL
Sbjct: 161 --YDELCVGVISEASRKVYQQVIESLTRRGAQAIILGCTEIGLLIKPEHSALPLL 213
>gi|334128319|ref|ZP_08502212.1| aspartate racemase [Centipeda periodontii DSM 2778]
gi|333387740|gb|EGK58933.1| aspartate racemase [Centipeda periodontii DSM 2778]
Length = 255
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE+AGA IV+ + H E+ + +P LH+++ A +LK+ ++ ++G+
Sbjct: 96 LERAGADYIVICTNTMHKVASEIGRNIHIPILHIADMTAVQLKKHGIR--------KVGL 147
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
L + FY+ L +G EV++P+ A ++
Sbjct: 148 LGTKYTMQQDFYKNILIEQGIEVLIPNDADVD 179
>gi|218899907|ref|YP_002448318.1| amino acid racemase [Bacillus cereus G9842]
gi|423560735|ref|ZP_17537011.1| aspartate racemase [Bacillus cereus MSX-A1]
gi|218545086|gb|ACK97480.1| probable amino-acid racemase [Bacillus cereus G9842]
gi|401203272|gb|EJR10112.1| aspartate racemase [Bacillus cereus MSX-A1]
Length = 224
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%), Gaps = 12/136 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE G I MPC+ +H++ +E+ + S+P L++ + + + E N K R+ +
Sbjct: 70 LESTGVSFIAMPCNTAHLYFEELQRSLSIPILNIVDETLQAIPE-NTK--------RVAL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQV 280
LA A + A YQ+ + E + +K + ++ + + ++E AR L L +
Sbjct: 121 LATEATVQARIYQDGIAKRNIEYIHHEK--WQESINQIITCIKSGEIEEARELWN-TLVL 177
Query: 281 LLVRAVNTVILASDDM 296
L ++T I+A D+
Sbjct: 178 QLRDEIDTAIIACTDL 193
>gi|299529910|ref|ZP_07043338.1| aspartate racemase [Comamonas testosteroni S44]
gi|298722082|gb|EFI63011.1| aspartate racemase [Comamonas testosteroni S44]
Length = 265
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 14/150 (9%)
Query: 162 EKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVL 221
+ GA C+++ + H D V S+PFLH+++ V + A ++ L G+L
Sbjct: 106 QAGGADCVLLCTNTMHKVADRVAAAVSIPFLHIADPVGAAARAAGVQVL--------GLL 157
Query: 222 AKNAILTAGFYQEKLQHE-GFEVVLP---DKATMEHTLIPALDALNRKDVEGARNLLRIA 277
+ F +E+L+ + G +V++P ++A + + L A DV +R L + A
Sbjct: 158 GTRFTMEQPFMRERLEQQFGLKVLVPGEAERAQVHRIIYEELCAGQISDV--SRKLYQRA 215
Query: 278 LQVLLVRAVNTVILASDDMQDLLPPDDPLL 307
++ L R V+L ++ L+ +D +L
Sbjct: 216 IESLAARGAQAVVLGCTEIGLLIKSEDSVL 245
>gi|257459814|ref|ZP_05624920.1| aspartate racemase family protein [Campylobacter gracilis RM3268]
gi|257442666|gb|EEV17803.1| aspartate racemase family protein [Campylobacter gracilis RM3268]
Length = 230
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 152 ENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLE 211
E L R L+ GA I + + H ++ + SVPF+H+++ EL++ ++
Sbjct: 62 EILARHARVLQSGGADYIFLCTNTMHKCYEAINAAISVPFVHIADATLSELRKRGVQ--- 118
Query: 212 AGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
++G+L +T FY+++L G EV++P+ ME
Sbjct: 119 -----KVGLLGTIYTMTQDFYKQRLIDGGVEVLVPNADEME 154
>gi|410647427|ref|ZP_11357859.1| aspartate racemase [Glaciecola agarilytica NO2]
gi|410133017|dbj|GAC06258.1| aspartate racemase [Glaciecola agarilytica NO2]
Length = 230
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 25/227 (11%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGG 141
T+G++GG S +ST + Q E N L S L+ L S D + + L KG
Sbjct: 3 TIGMLGGMSWESTAQYYRLINQ---EVNHRLKGLHSASLI---LRSVDFENIAFLQQKG- 55
Query: 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
D + L + + LEKAGA +++ + H E+ SVP LH+++ A+
Sbjct: 56 ----DWKEAGKILSEEAINLEKAGADFLIICTNTMHKVAPEITASISVPVLHIADTTAEV 111
Query: 202 LKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLP---DKATMEHTLIP 257
L++ N+ R+G+L + FY +L ++ G EV+ P D+A + + +
Sbjct: 112 LQQENIS--------RVGLLGTAFTMEQSFYTSRLTNKFGIEVITPNTDDRAVVHNIIYQ 163
Query: 258 ALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
L KD E + L I + L VIL ++ L+ D
Sbjct: 164 ELCKGKIKD-ESRKKYLNI-ISALAADGCQGVILGCTEISLLVKQID 208
>gi|408377935|ref|ZP_11175534.1| aspartate racemase [Agrobacterium albertimagni AOL15]
gi|407748049|gb|EKF59566.1| aspartate racemase [Agrobacterium albertimagni AOL15]
Length = 237
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 10/98 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LEKAGA C+++ + H+ DEV VP +++ + A LK K PL +
Sbjct: 71 LEKAGADCVLICTNTMHLVADEVQARIDVPLINIIDETAHALKAGGAK-----HPL---L 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKA--TMEHTLI 256
LA + FY E+++ G E+++PD T+ H +I
Sbjct: 123 LATRYTMEQPFYAERMKRHGIEIMVPDAEGRTVTHDVI 160
>gi|392556287|ref|ZP_10303424.1| aspartate racemase [Pseudoalteromonas undina NCIMB 2128]
Length = 231
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 102/224 (45%), Gaps = 23/224 (10%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGG 141
T+G++GG S +ST + L + G +N L + + +S D + +L +
Sbjct: 3 TIGMLGGMSWESTASYYKALNE--GVKNSLGGLHSAKICM----VSVDFAKIEALQHQSD 56
Query: 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
Q + ++ E + +E GA +++ + H DE+ ++P LH+++ A++
Sbjct: 57 WQQTAN-ILTEAAKS----VEAGGADFLLICTNTMHKVADEIASNITIPILHIADATAEQ 111
Query: 202 LKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKL-QHEGFEVVLPD--KATMEHTLIPA 258
LK N+ R+G+L + FY+E+L EV++P+ + H +I +
Sbjct: 112 LKHDNIT--------RVGLLGTQFTMEQNFYKERLTDKHNIEVLIPEPNERKRVHEVIYS 163
Query: 259 LDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPP 302
L D + + +RI ++ L + VIL ++ L+ P
Sbjct: 164 QLCLGIIDDDSRADYIRI-IERLFAQGAQAVILGCTEIALLVKP 206
>gi|421867642|ref|ZP_16299298.1| Aspartate racemase [Burkholderia cenocepacia H111]
gi|358072386|emb|CCE50176.1| Aspartate racemase [Burkholderia cenocepacia H111]
Length = 230
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 107/252 (42%), Gaps = 34/252 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQ----LSGEENDFPFLLCSDPLLNKELL--SHDRSSFS 134
T+G++GG S +S+ + + L G ++ +L + + E L +HD ++
Sbjct: 2 KTIGLIGGMSWESSAEYYRMINRHSKALHGGHHNAKSVLVTVDFADIEALQRTHDWAAL- 60
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
G ++ D+ R+ LE AGA +V+ + H HD + ++PFLH+
Sbjct: 61 -------GERMADAA------RQ---LEAAGADLVVLTTNTMHRVHDAIEAAVTLPFLHI 104
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEH 253
++ L+ A ++ R+ +L + FY +L+ + G +V++PD+ +
Sbjct: 105 ADPTGSALRAAGVE--------RVALLGTRYTMELPFYAARLREKFGLDVLVPDEPGRDD 156
Query: 254 TLIPALDALNRKDVEGARNLLRIA-LQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCID 312
D L + ++ + L R VIL ++ L+ DD L D
Sbjct: 157 VHRIIYDELCHGVISTQSRATYVSIIDALATRGAQAVILGCTEITLLIGADDSPL-PVFD 215
Query: 313 PMDALARSTIKW 324
A++ ++W
Sbjct: 216 TTALHAKAAVEW 227
>gi|172061098|ref|YP_001808750.1| aspartate racemase [Burkholderia ambifaria MC40-6]
gi|171993615|gb|ACB64534.1| aspartate racemase [Burkholderia ambifaria MC40-6]
Length = 230
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE AGA +V+ + H +D + ++PFLH+++ L+ A ++ R+ +
Sbjct: 71 LEAAGADLVVLTTNTMHRVYDAIEAAVALPFLHIADPTGAALRAAGVE--------RVAL 122
Query: 221 LAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIA-L 278
L + FY E+L+ + G +V++PD+A D L ++ A +A +
Sbjct: 123 LGTRYTMELPFYAERLRDKFGLDVLVPDEAARGDVHRIIYDELCHGVIDAASRATYVAII 182
Query: 279 QVLLVRAVNTVILASDDMQDLL-PPDDPLLKKCIDPMDALARSTIKW 324
L R VIL ++ L+ D PL D A++ ++W
Sbjct: 183 DELAKRGAQAVILGCTEITLLIGAADSPL--PVFDTTALHAKAAVEW 227
>gi|359393546|ref|ZP_09186599.1| hypothetical protein KUC_0185 [Halomonas boliviensis LC1]
gi|357970793|gb|EHJ93238.1| hypothetical protein KUC_0185 [Halomonas boliviensis LC1]
Length = 234
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
+E+AGA C+++ + H + K ++P LH+++ A++L+ + R+G+
Sbjct: 71 VERAGADCLLIATNTMHKVAPAIAKAITIPLLHIADATAEQLQTDGIT--------RVGL 122
Query: 221 LAKNAILTAGFYQEKLQHE-GFEVVLPDKA 249
L + FY +L+ + G EVV+PD++
Sbjct: 123 LGTRFTMEQDFYIGRLEEQFGIEVVVPDQS 152
>gi|266623105|ref|ZP_06116040.1| aspartate racemase [Clostridium hathewayi DSM 13479]
gi|288865142|gb|EFC97440.1| aspartate racemase [Clostridium hathewayi DSM 13479]
Length = 235
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
L+KAGA IV+ + H ++ +P LH++E A LK M R+G+
Sbjct: 71 LQKAGADFIVICTNTMHKVVPQIQSKIHIPILHIAEAAALRLKAERMD--------RVGL 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
L +T FY+ KL G EV++P+ + +E
Sbjct: 123 LGTKYTMTQDFYKGKLAEYGVEVLIPEASEIE 154
>gi|424800907|ref|ZP_18226449.1| Aspartate racemase [Cronobacter sakazakii 696]
gi|423236628|emb|CCK08319.1| Aspartate racemase [Cronobacter sakazakii 696]
Length = 233
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 82/169 (48%), Gaps = 22/169 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +ST+ +L+ G + L + +LL H C+
Sbjct: 2 KTIGLLGGMSWESTIPYY-RLIN-EGVRDRL------GGLHSAQLLLHSVDFHEIEACQA 53
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
G + D + E L + + LE+AGA+ IV+ + H ++ C++PFLH+++ +
Sbjct: 54 SG-EWDKA--GEMLAQAALGLERAGAQAIVLCTNTMHKVAHQIEARCALPFLHIADATGR 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEV--VLPD 247
+ +A ++ ++ +L + FY+ +L+ EGF V ++PD
Sbjct: 111 AIAQAGLR--------QVALLGTRYTMEQDFYRARLE-EGFGVTLIIPD 150
>gi|115352231|ref|YP_774070.1| aspartate racemase [Burkholderia ambifaria AMMD]
gi|115282219|gb|ABI87736.1| aspartate racemase [Burkholderia ambifaria AMMD]
Length = 230
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 11/166 (6%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE AGA +V+ + H + + ++PFLH+++ L+ A ++ R+ +
Sbjct: 71 LEAAGADLVVLTTNTMHRVYGAIEAAVALPFLHIADPTGAALRAAGVE--------RVAL 122
Query: 221 LAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIA-L 278
L + FY E+L+ + G +V++PD+A D L ++ A +A +
Sbjct: 123 LGTRYTMELPFYAERLRDKFGLDVLVPDEAARGDVHRIIYDELCHGVIDAASRATYVAII 182
Query: 279 QVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIKW 324
L R VIL ++ L+ DD L D A++ ++W
Sbjct: 183 DELAKRGAQAVILGCTEITLLIGADDSPL-PVFDTTALHAKAAVEW 227
>gi|440227020|ref|YP_007334111.1| aspartate racemase [Rhizobium tropici CIAT 899]
gi|440038531|gb|AGB71565.1| aspartate racemase [Rhizobium tropici CIAT 899]
Length = 239
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEAN-MKPLEAGSPLRIG 219
L+KAGA C+++ + H+ +V + S P +H+ + A LK A +KPL
Sbjct: 71 LQKAGAECVLICTNTMHLIAPQVAERVSAPLIHIIDETAAALKAAGRIKPL--------- 121
Query: 220 VLAKNAILTAGFYQEKLQHEGFEVVL--PDKATMEHTLI 256
+LA + GFY E++ G +++ P+ T+ H +I
Sbjct: 122 LLATRYTMEHGFYAERMAENGVSIMVPGPEDRTVTHDII 160
>gi|374329167|ref|YP_005079351.1| Aspartate racemase [Pseudovibrio sp. FO-BEG1]
gi|359341955|gb|AEV35329.1| Aspartate racemase [Pseudovibrio sp. FO-BEG1]
Length = 200
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEAN-MKPLEA 212
L++ + LE AGA CIV+ + H + G ++PF+H++E A +++ KPL
Sbjct: 25 LKQAALKLEGAGADCIVICANTMHKVASYIQDGLTIPFIHIAETTATAIQKVKRRKPL-- 82
Query: 213 GSPLRIGVLAKNAILTAGFYQEKLQH-EGFEVVLPDKATMEHTLIPALDALNRKDV--EG 269
+LA ++ FY ++L+ G VV+PD A + L R + +
Sbjct: 83 -------LLATRYLMEHDFYVKRLEELHGMSVVVPDNGGQAVVHDIAYNELCRGQINEDS 135
Query: 270 ARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
R LL+I + + ++VILA ++ L+ +D
Sbjct: 136 RRTLLQIVRKA-QDQGADSVILACTELGLLVGQED 169
>gi|429092273|ref|ZP_19154914.1| Aspartate racemase [Cronobacter dublinensis 1210]
gi|426743080|emb|CCJ81027.1| Aspartate racemase [Cronobacter dublinensis 1210]
Length = 233
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 99/235 (42%), Gaps = 39/235 (16%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
TVG++GG S +ST+ +L+ G + L + LL+ S D + G
Sbjct: 2 KTVGLLGGMSWESTIPYY-RLIN-EGVRDRLGGLHSAQLLLH----SVDFHEIEACQASG 55
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
+ D L + + LE+AGA+ IV+ + H ++ CS+PFLH+++ +
Sbjct: 56 EWEKAGD-----RLAQAALGLERAGAQAIVLCTNTMHKVAHQIEARCSLPFLHIADATGR 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEV--VLPDKATMEHTLIPA 258
+K A + ++ +L + FY+ +L EGF V ++PD+ PA
Sbjct: 111 AIKAAGLA--------QVALLGTRYTMEQDFYRARLS-EGFGVQTLIPDE--------PA 153
Query: 259 LDALNR---------KDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
+N+ K G++ + + +L VI ++ LL D
Sbjct: 154 RARINQIIFEELCLGKITAGSKRYFQQQIDILAADGAQGVIFGCTEIGLLLGAQD 208
>gi|107028677|ref|YP_625772.1| aspartate racemase [Burkholderia cenocepacia AU 1054]
gi|116690164|ref|YP_835787.1| aspartate racemase [Burkholderia cenocepacia HI2424]
gi|105897841|gb|ABF80799.1| Aspartate racemase [Burkholderia cenocepacia AU 1054]
gi|116648253|gb|ABK08894.1| aspartate racemase [Burkholderia cenocepacia HI2424]
Length = 230
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 106/252 (42%), Gaps = 34/252 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQ----LSGEENDFPFLLCSDPLLNKELLS--HDRSSFS 134
T+G++GG S +S+ + + L G ++ +L + E L HD ++
Sbjct: 2 KTIGLIGGMSWESSAEYYRMINRHSKALHGGHHNAKSVLVTVDFAEIEALQRMHDWAAL- 60
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
G ++ D+ RR LE AGA +V+ + H HD + ++PFLH+
Sbjct: 61 -------GERMADAA-----RR----LEAAGADLVVLTTNTMHRVHDAIEAAVTLPFLHI 104
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEH 253
++ L+ A ++ R+ +L + FY +L+ + G +V++PD+ +
Sbjct: 105 ADPTGSALRAAGVE--------RVALLGTRYTMELPFYAARLREKFGLDVLVPDERGRDD 156
Query: 254 TLIPALDALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCID 312
D L + E +R + L R VIL ++ L+ DD L D
Sbjct: 157 VHRIIYDELCHGVISEESRATYVSIIDGLAQRGAQAVILGCTEITLLIGADDSPL-PVFD 215
Query: 313 PMDALARSTIKW 324
A++ ++W
Sbjct: 216 TTALHAKAAVEW 227
>gi|392540807|ref|ZP_10287944.1| hypothetical protein PpisJ2_03133 [Pseudoalteromonas piscicida JCM
20779]
Length = 238
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 31/151 (20%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
L+ AG+ IV+ + H DE+ +P LH+++ AK LK+ +K RI +
Sbjct: 71 LKLAGSDAIVICTNTMHKISDEISAASGLPVLHIADATAKRLKDDGVK--------RIAL 122
Query: 221 LAKNAILTAGFYQEKLQH-EGFEVVLPD--------------------KATMEHTLIPAL 259
L + FY+ +LQ G EV+ PD A+ T + +
Sbjct: 123 LGTRFTMQQDFYKARLQDLHGIEVITPDGDQQALVHDIIYDELCCGEVNASSRQTYLDII 182
Query: 260 DALNRKDVEGARNLLRIALQVLLVRAVNTVI 290
DAL ++ EG +L LLV+ V+T +
Sbjct: 183 DALYQQGAEGV--ILGCTEIGLLVQQVHTQV 211
>gi|343499437|ref|ZP_08737409.1| hypothetical protein VITU9109_01887 [Vibrio tubiashii ATCC 19109]
gi|418480194|ref|ZP_13049258.1| hypothetical protein VT1337_17190 [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
gi|342822785|gb|EGU57464.1| hypothetical protein VITU9109_01887 [Vibrio tubiashii ATCC 19109]
gi|384572172|gb|EIF02694.1| hypothetical protein VT1337_17190 [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
Length = 230
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 83/167 (49%), Gaps = 20/167 (11%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGG 141
T+GI+GG S +ST +L + G ++ L + +LN S D + +L + G
Sbjct: 3 TIGIIGGMSWESTAIYYQQLNE--GVKSAKGGLHSAKIILN----SVDFAEVEALQ-RSG 55
Query: 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
Q + +++ + + +EKAGA I++ + H +V + S+P LH+++ E
Sbjct: 56 DWQANATILCQAAQS----IEKAGADFILIATNTMHKVAGQVEESISIPLLHIADATGVE 111
Query: 202 LKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPD 247
L++ + +IG+L + FY+++L + G EVV+P+
Sbjct: 112 LQQRGIT--------KIGLLGTAFTMEQAFYKQRLTDKFGIEVVVPN 150
>gi|304394921|ref|ZP_07376805.1| aspartate racemase [Pantoea sp. aB]
gi|304357174|gb|EFM21537.1| aspartate racemase [Pantoea sp. aB]
Length = 230
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 69/148 (46%), Gaps = 12/148 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE+AGA+ IV+ + H ++ +P LH+++ + +++A + ++G+
Sbjct: 71 LERAGAQFIVLCTNTMHKVAAQISAATDIPLLHIADATGRRIQQAGVH--------KVGL 122
Query: 221 LAKNAILTAGFYQEKLQHE-GFEVVLPDKA--TMEHTLIPALDALNRKDVEGARNLLRIA 277
LA + FY+ +L + G EV+ PD+A H +I L + +R R
Sbjct: 123 LATRFTMEQDFYRGRLHEQFGLEVITPDEADRLFVHEVIYQELCLGEIN-PASRRRYREI 181
Query: 278 LQVLLVRAVNTVILASDDMQDLLPPDDP 305
+Q L+ + +IL ++ L+ D
Sbjct: 182 MQRLVAQGAEAIILGCTEITLLVDATDA 209
>gi|424762837|ref|ZP_18190321.1| aspartate racemase [Enterococcus faecium TX1337RF]
gi|431762104|ref|ZP_19550666.1| aspartate racemase [Enterococcus faecium E3548]
gi|402423755|gb|EJV55958.1| aspartate racemase [Enterococcus faecium TX1337RF]
gi|430624796|gb|ELB61446.1| aspartate racemase [Enterococcus faecium E3548]
Length = 243
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 169 IVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILT 228
IV+ C+ +H + +E+ +P LH+ A EL + + ++ +L +
Sbjct: 80 IVLTCNTAHYFFEELQAATDIPILHMPREAANEL-------VRQHTTGKVAILGTEGSMK 132
Query: 229 AGFYQEKLQHEGFEVVLPDKATME 252
AG Y+ ++++ GFE V+PD A E
Sbjct: 133 AGIYEREVKNLGFETVIPDTALQE 156
>gi|431756877|ref|ZP_19545509.1| aspartate racemase [Enterococcus faecium E3083]
gi|430620731|gb|ELB57533.1| aspartate racemase [Enterococcus faecium E3083]
Length = 243
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 169 IVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILT 228
IV+ C+ +H + +E+ +P LH+ A EL + + ++ +L +
Sbjct: 80 IVLTCNTAHYFFEELQAATDIPILHMPREAANEL-------VRQHTTGKVAILGTEGSMK 132
Query: 229 AGFYQEKLQHEGFEVVLPDKATME 252
AG Y+ ++++ GFE V+PD A E
Sbjct: 133 AGIYEREVKNLGFETVIPDTALQE 156
>gi|423082748|ref|ZP_17071337.1| aspartate racemase [Clostridium difficile 002-P50-2011]
gi|423086958|ref|ZP_17075348.1| aspartate racemase [Clostridium difficile 050-P50-2011]
gi|357545541|gb|EHJ27512.1| aspartate racemase [Clostridium difficile 050-P50-2011]
gi|357547866|gb|EHJ29741.1| aspartate racemase [Clostridium difficile 002-P50-2011]
Length = 232
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 84/181 (46%), Gaps = 22/181 (12%)
Query: 150 IVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKP 209
I++ L++ LE G I MPC+ +HI+ E+ + ++P L++ E K+L + K
Sbjct: 67 IIDGLQK----LESTGVNFIAMPCNSAHIYFKELKESINIPLLNIVEETVKKLPTLSQK- 121
Query: 210 LEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME-HTLIP--ALDALNRKD 266
+ + + ++ + YQ + H G E + D+ ++ +TLI +D N +
Sbjct: 122 --------VTLFSTSSTFESTIYQNGIIHNGHEFIFKDEWQIKLNTLIQNIKIDKENPHN 173
Query: 267 VEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTI-KWV 325
++ L+ ++ +++A D+ +L P + +D LA S + K++
Sbjct: 174 IDIWNKLIEDVKN----ESIENIVIACTDLNVVLEKSYPSI-NIVDSSKCLAESVVNKYL 228
Query: 326 K 326
K
Sbjct: 229 K 229
>gi|423397136|ref|ZP_17374337.1| aspartate racemase [Bacillus cereus BAG2X1-1]
gi|423407974|ref|ZP_17385123.1| aspartate racemase [Bacillus cereus BAG2X1-3]
gi|401650663|gb|EJS68233.1| aspartate racemase [Bacillus cereus BAG2X1-1]
gi|401658412|gb|EJS75908.1| aspartate racemase [Bacillus cereus BAG2X1-3]
Length = 232
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 102/230 (44%), Gaps = 32/230 (13%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEE--NDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
T+G++GG S +ST + ++ EE + L + L+N SS +
Sbjct: 3 TIGLIGGMSWEST----SEYYRILNEEIKSRLGGLHSAKCLINSVDFEEIERYQSSGDWD 58
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G G E L L+K+GA I++ + H +++ + ++P LH+++ A
Sbjct: 59 GAG---------ELLGNAAYSLQKSGADFIIICTNTMHKVVEKIKENINIPVLHIADATA 109
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEHTLI 256
KE+K ++ R+G+L + FY+ +++ +V++P D+ + +
Sbjct: 110 KEIKRKGIQ--------RVGLLGTKYTMEQDFYKSRIEENDIKVMVPLVKDREKINEVIY 161
Query: 257 PA--LDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
L +N + +R + ++ L+ + V +IL ++ L+ +D
Sbjct: 162 TELCLGKINSQ----SREYYKSVIEELVQQGVQGIILGCTEIGLLIKQED 207
>gi|293557294|ref|ZP_06675840.1| aspartate racemase [Enterococcus faecium E1039]
gi|293568099|ref|ZP_06679436.1| aspartate racemase [Enterococcus faecium E1071]
gi|294616494|ref|ZP_06696275.1| aspartate racemase [Enterococcus faecium E1636]
gi|294617425|ref|ZP_06697059.1| aspartate racemase [Enterococcus faecium E1679]
gi|406580747|ref|ZP_11055936.1| aspartate racemase [Enterococcus sp. GMD4E]
gi|406583082|ref|ZP_11058175.1| aspartate racemase [Enterococcus sp. GMD3E]
gi|406585434|ref|ZP_11060424.1| aspartate racemase [Enterococcus sp. GMD2E]
gi|406590515|ref|ZP_11064880.1| aspartate racemase [Enterococcus sp. GMD1E]
gi|410937267|ref|ZP_11369128.1| aspartate racemase [Enterococcus sp. GMD5E]
gi|415893423|ref|ZP_11550156.1| aspartate racemase [Enterococcus faecium E4453]
gi|416129604|ref|ZP_11597345.1| aspartate racemase [Enterococcus faecium E4452]
gi|425058946|ref|ZP_18462303.1| aspartate racemase [Enterococcus faecium 504]
gi|427396246|ref|ZP_18889005.1| aspartate racemase [Enterococcus durans FB129-CNAB-4]
gi|430822599|ref|ZP_19441177.1| aspartate racemase [Enterococcus faecium E0120]
gi|430825558|ref|ZP_19443762.1| aspartate racemase [Enterococcus faecium E0164]
gi|430827688|ref|ZP_19445820.1| aspartate racemase [Enterococcus faecium E0269]
gi|430833021|ref|ZP_19451034.1| aspartate racemase [Enterococcus faecium E0679]
gi|430835727|ref|ZP_19453714.1| aspartate racemase [Enterococcus faecium E0680]
gi|430838172|ref|ZP_19456122.1| aspartate racemase [Enterococcus faecium E0688]
gi|430849612|ref|ZP_19467385.1| aspartate racemase [Enterococcus faecium E1185]
gi|430858069|ref|ZP_19475698.1| aspartate racemase [Enterococcus faecium E1552]
gi|430860270|ref|ZP_19477874.1| aspartate racemase [Enterococcus faecium E1573]
gi|430865159|ref|ZP_19480917.1| aspartate racemase [Enterococcus faecium E1574]
gi|430871416|ref|ZP_19483739.1| aspartate racemase [Enterococcus faecium E1575]
gi|430949078|ref|ZP_19485997.1| aspartate racemase [Enterococcus faecium E1576]
gi|431005399|ref|ZP_19489045.1| aspartate racemase [Enterococcus faecium E1578]
gi|431146210|ref|ZP_19499107.1| aspartate racemase [Enterococcus faecium E1620]
gi|431229850|ref|ZP_19502053.1| aspartate racemase [Enterococcus faecium E1622]
gi|431252313|ref|ZP_19504371.1| aspartate racemase [Enterococcus faecium E1623]
gi|431293373|ref|ZP_19506841.1| aspartate racemase [Enterococcus faecium E1626]
gi|431412519|ref|ZP_19511954.1| aspartate racemase [Enterococcus faecium E1630]
gi|431497625|ref|ZP_19514779.1| aspartate racemase [Enterococcus faecium E1634]
gi|431656302|ref|ZP_19523850.1| aspartate racemase [Enterococcus faecium E1904]
gi|431743056|ref|ZP_19531937.1| aspartate racemase [Enterococcus faecium E2071]
gi|431746247|ref|ZP_19535081.1| aspartate racemase [Enterococcus faecium E2134]
gi|431759407|ref|ZP_19548021.1| aspartate racemase [Enterococcus faecium E3346]
gi|431764182|ref|ZP_19552725.1| aspartate racemase [Enterococcus faecium E4215]
gi|431781833|ref|ZP_19569974.1| aspartate racemase [Enterococcus faecium E6012]
gi|431785789|ref|ZP_19573812.1| aspartate racemase [Enterococcus faecium E6045]
gi|447912506|ref|YP_007393918.1| Aspartate racemase [Enterococcus faecium NRRL B-2354]
gi|291589181|gb|EFF20992.1| aspartate racemase [Enterococcus faecium E1071]
gi|291590642|gb|EFF22370.1| aspartate racemase [Enterococcus faecium E1636]
gi|291596331|gb|EFF27590.1| aspartate racemase [Enterococcus faecium E1679]
gi|291600546|gb|EFF30852.1| aspartate racemase [Enterococcus faecium E1039]
gi|364092760|gb|EHM35097.1| aspartate racemase [Enterococcus faecium E4453]
gi|364094323|gb|EHM36512.1| aspartate racemase [Enterococcus faecium E4452]
gi|403037066|gb|EJY48392.1| aspartate racemase [Enterococcus faecium 504]
gi|404453502|gb|EKA00555.1| aspartate racemase [Enterococcus sp. GMD4E]
gi|404457237|gb|EKA03799.1| aspartate racemase [Enterococcus sp. GMD3E]
gi|404462721|gb|EKA08434.1| aspartate racemase [Enterococcus sp. GMD2E]
gi|404469213|gb|EKA14032.1| aspartate racemase [Enterococcus sp. GMD1E]
gi|410734378|gb|EKQ76298.1| aspartate racemase [Enterococcus sp. GMD5E]
gi|425722916|gb|EKU85807.1| aspartate racemase [Enterococcus durans FB129-CNAB-4]
gi|430443176|gb|ELA53173.1| aspartate racemase [Enterococcus faecium E0120]
gi|430446023|gb|ELA55722.1| aspartate racemase [Enterococcus faecium E0164]
gi|430484290|gb|ELA61311.1| aspartate racemase [Enterococcus faecium E0269]
gi|430486476|gb|ELA63312.1| aspartate racemase [Enterococcus faecium E0679]
gi|430489089|gb|ELA65722.1| aspartate racemase [Enterococcus faecium E0680]
gi|430492452|gb|ELA68866.1| aspartate racemase [Enterococcus faecium E0688]
gi|430537363|gb|ELA77706.1| aspartate racemase [Enterococcus faecium E1185]
gi|430546021|gb|ELA85987.1| aspartate racemase [Enterococcus faecium E1552]
gi|430552707|gb|ELA92435.1| aspartate racemase [Enterococcus faecium E1573]
gi|430553237|gb|ELA92938.1| aspartate racemase [Enterococcus faecium E1574]
gi|430557736|gb|ELA97173.1| aspartate racemase [Enterococcus faecium E1575]
gi|430557923|gb|ELA97359.1| aspartate racemase [Enterococcus faecium E1576]
gi|430561432|gb|ELB00700.1| aspartate racemase [Enterococcus faecium E1578]
gi|430573836|gb|ELB12614.1| aspartate racemase [Enterococcus faecium E1622]
gi|430575750|gb|ELB14447.1| aspartate racemase [Enterococcus faecium E1620]
gi|430578739|gb|ELB17291.1| aspartate racemase [Enterococcus faecium E1623]
gi|430582010|gb|ELB20445.1| aspartate racemase [Enterococcus faecium E1626]
gi|430588560|gb|ELB26752.1| aspartate racemase [Enterococcus faecium E1634]
gi|430589474|gb|ELB27602.1| aspartate racemase [Enterococcus faecium E1630]
gi|430600551|gb|ELB38191.1| aspartate racemase [Enterococcus faecium E1904]
gi|430607420|gb|ELB44740.1| aspartate racemase [Enterococcus faecium E2071]
gi|430609016|gb|ELB46222.1| aspartate racemase [Enterococcus faecium E2134]
gi|430626207|gb|ELB62793.1| aspartate racemase [Enterococcus faecium E3346]
gi|430631367|gb|ELB67689.1| aspartate racemase [Enterococcus faecium E4215]
gi|430646948|gb|ELB82409.1| aspartate racemase [Enterococcus faecium E6045]
gi|430648687|gb|ELB84091.1| aspartate racemase [Enterococcus faecium E6012]
gi|445188215|gb|AGE29857.1| Aspartate racemase [Enterococcus faecium NRRL B-2354]
Length = 243
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 169 IVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILT 228
IV+ C+ +H + +E+ +P LH+ A EL + + R+ +L +
Sbjct: 80 IVLTCNTAHYFFEELQAATDIPILHMPREAANEL-------VRQHTTGRVAILGTEGSMK 132
Query: 229 AGFYQEKLQHEGFEVVLPDKATME 252
AG Y+ ++++ GFE V+PD E
Sbjct: 133 AGIYEREVKNLGFETVIPDTVLQE 156
>gi|328955321|ref|YP_004372654.1| aspartate racemase [Coriobacterium glomerans PW2]
gi|328455645|gb|AEB06839.1| aspartate racemase [Coriobacterium glomerans PW2]
Length = 250
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 109/263 (41%), Gaps = 48/263 (18%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLS-----GEENDFPFLLCSD-PLLNKELLSHDRSSFSSL 136
+G++GG ++T ++++ + + D L C+ P + + S D S +L
Sbjct: 4 LGVIGGMGPEATAYFYEQVIRHTVATRDQDHVDMVILSCASMPDRTRSIRSGDSSELLAL 63
Query: 137 --NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH- 193
+C G LE G I +PC+ SH ++D++ +VP +H
Sbjct: 64 MRSCTGA-------------------LESLGCANIAIPCNTSHYYYDQIRASTNVPIIHM 104
Query: 194 VSECVAKEL-----KEANMKP-----LEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEV 243
V E V + A++ P P RIG++A + + +G Y + G E
Sbjct: 105 VREAVRYAVFGVLPDTASIDPACAPRAPRMPPRRIGIMATDGTIMSGVYHRACRAFGVEP 164
Query: 244 VLPDKATMEHTLIPALDALNRKDVEGAR--NLLRIALQVLLVRA--VNTVILASDDMQDL 299
+ PD++ + +L DV+ R ++ + V RA + VILA ++ +
Sbjct: 165 IEPDESRQRDVM-----SLIYDDVKAGRDPDMDKFDRVVRAFRADGCDRVILACTELS-V 218
Query: 300 LPPDDPLLKKCIDPMDALARSTI 322
+ + +D MDAL R I
Sbjct: 219 ISRSRAMPAYVLDAMDALVREAI 241
>gi|89092907|ref|ZP_01165859.1| hypothetical protein MED92_10614 [Neptuniibacter caesariensis]
gi|89082932|gb|EAR62152.1| hypothetical protein MED92_10614 [Oceanospirillum sp. MED92]
Length = 233
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 22/178 (12%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGG 141
T+G++GG S +ST + ++ + G + + L + +LN S D SL G
Sbjct: 3 TIGLLGGMSWESTTSYYQQINR--GVQKELGGLHSAKVILN----SVDFVEIESLQHVGD 56
Query: 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
D LI +E+AGA +++ + H D + + S+P LH+++ A++
Sbjct: 57 WQGTADILI-----EAAKGVERAGADFVLICTNTMHKVADAIQENISIPILHIADATAEK 111
Query: 202 LKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKL-QHEGFEVVLPDKATME--HTLI 256
LK A ++G+L + FY+++L G EVV+P+ E H++I
Sbjct: 112 LK--------ADGVSKVGLLGTRFTMEQDFYKQRLTDKHGIEVVVPEAEEREVVHSVI 161
>gi|319942626|ref|ZP_08016934.1| hypothetical protein HMPREF9464_02153 [Sutterella wadsworthensis
3_1_45B]
gi|319803805|gb|EFW00737.1| hypothetical protein HMPREF9464_02153 [Sutterella wadsworthensis
3_1_45B]
Length = 479
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 111/264 (42%), Gaps = 37/264 (14%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
VG++GG +T++L K+V+ + + D ++ +P + DR++ C
Sbjct: 236 VGLIGGLGPAATVDLYDKIVKATPAKTDQEHIKLVVEQNPQIP------DRTA-----CL 284
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G + D +L + + ++ LE G +++PC+ +H + + + +PF+++ +
Sbjct: 285 LNGGE-DPTLALFHCAQR---LEADGCSTLIVPCNTAHAFLPYLERFIKIPFINMQQAAL 340
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPAL 259
E++ + G+ +IG+LA + G Y +K G + +PD E +
Sbjct: 341 DEIQN------KLGTRAKIGLLATTGTVQTGIYGDKANAMGLPMFVPDDVHQERVMAAIY 394
Query: 260 DALNRKDVEGARN------LLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKK---- 309
K G N L+ A ++ N +IL ++ +L D
Sbjct: 395 GPQGAK--AGYTNGICREDLISAAEYLVKTHGCNCLILGCTELPLILDESDDFEVAGSRV 452
Query: 310 -CIDPMDALARSTIKWVKSAEKGT 332
+DP ALAR +K + A T
Sbjct: 453 IVVDPTAALARKVVKTAEDAYAAT 476
>gi|441500812|ref|ZP_20982961.1| Aspartate racemase [Fulvivirga imtechensis AK7]
gi|441435386|gb|ELR68781.1| Aspartate racemase [Fulvivirga imtechensis AK7]
Length = 267
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 114/277 (41%), Gaps = 49/277 (17%)
Query: 76 LLNQANTVGIVGGASVDSTLNLLGKLVQLS--GEENDFPFLLCSDPLLNKELLSHDRSSF 133
+L + +GIVGG + +NL +L+ L+ + + P ++ L+ DR+SF
Sbjct: 2 VLENSKVIGIVGGMGPRAGVNLYDRLISLTPANIDQEHPSVI----LMAFPWEIGDRTSF 57
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
G + + + + +K L +GA I + C+ SH S +
Sbjct: 58 LE-----GKISTNPGYSIAQVIKK---LTISGAEIIGIACNTSH----------SPAIFN 99
Query: 194 VSECVAKELKEANMKPLEAGSPL-------------RIGVLAKNAILTAGFYQEKLQHEG 240
V + E+++ + KP PL RIG++A N YQE L G
Sbjct: 100 V---IKSEMEKLDAKPKLLHMPLEVYKYISTNSNVSRIGIMATNGTYKTRLYQEILHDGG 156
Query: 241 FEVVLPD---KATMEHTLIP----ALDALNRKDVEGARNLLRIALQVLLVRAVNTVILAS 293
+EV++PD + + H +I + A + L A+ R +T+IL
Sbjct: 157 YEVIVPDPIFQNEVIHRMIYDAQFGIKAKPNTITKEVGQLWNEAMCFFRARNCDTIILGC 216
Query: 294 DDMQDLLPPDDPLLKKC-IDPMDALARSTIKWVKSAE 329
++ LL D + C ID D LA+ ++ ++ E
Sbjct: 217 TELS-LLLKDYGVDDMCIIDSTDCLAKGLLREMRPCE 252
>gi|304436557|ref|ZP_07396527.1| aspartate racemase [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304370427|gb|EFM24082.1| aspartate racemase [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 255
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE+AGA IV+ + H E+ + +P LH+++ A +LK+ ++ ++G+
Sbjct: 96 LERAGADYIVICTNTMHKVAPEIGRRIHIPILHIADMTAVQLKKHGIR--------KVGL 147
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
L + FY+ L +G EVV+P+ A ++
Sbjct: 148 LGTKYTMQQDFYKNILIEQGIEVVIPNDAGVD 179
>gi|433460614|ref|ZP_20418241.1| aspartate racemase [Halobacillus sp. BAB-2008]
gi|432191257|gb|ELK48225.1| aspartate racemase [Halobacillus sp. BAB-2008]
Length = 236
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LEK G V+PC +H + +EV K S P L+ + K +++ K +IGV
Sbjct: 72 LEKLGVEVAVIPCMTAHYFIEEVQKSVSFPLLNAFLELKKFIQDHYPK------VTKIGV 125
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALN-----RKDVEGARNLLR 275
LA L +G +Q+ H EVV P T ++ ++ A+ N D + L
Sbjct: 126 LATTGTLESGLFQKYFDH--LEVVTPTPLTQKNKVMDAIYGENGIKSGNTDHDPLDKLKE 183
Query: 276 IALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIK 323
+++ LL +I ++ +L P L IDPM+ +A +K
Sbjct: 184 ASME-LLNNGAELIISGCTEIGLVLKPYH-LSVPLIDPMEVVANVVVK 229
>gi|134296325|ref|YP_001120060.1| aspartate racemase [Burkholderia vietnamiensis G4]
gi|134139482|gb|ABO55225.1| aspartate racemase [Burkholderia vietnamiensis G4]
Length = 230
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 34/252 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLS-----GEENDFPFLLCSDPLLNKELLSHDRSSFSS 135
T+G++GG S +S+ + + S G N L+ D E+ + R+
Sbjct: 2 KTIGLIGGMSWESSAEYYRMINRYSKALHGGHHNAKSVLVTVD---FAEIEALQRAQ--- 55
Query: 136 LNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195
+ + G ++ D+ RR LE AGA IV+ + H HD + ++PFLH++
Sbjct: 56 -DWRALGERMADAA-----RR----LEAAGADLIVLTTNTMHRVHDAIEAAVTLPFLHIA 105
Query: 196 ECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEHT 254
+ L+ A ++ R+ +L + FY ++L+ G +V++PD+
Sbjct: 106 DPTGNALRAAGVE--------RVALLGTRYTMELPFYAQRLRDRFGLDVLVPDEPARADV 157
Query: 255 LIPALDALNRKDVEGARNLLRIA-LQVLLVRAVNTVILASDDMQDLL-PPDDPLLKKCID 312
D L ++ +A + L R VIL ++ L+ D PL D
Sbjct: 158 HRIIYDELCHGRIDAHSRATYVAIIDELARRGAQAVILGCTEITLLIGDADSPL--PVFD 215
Query: 313 PMDALARSTIKW 324
A++ ++W
Sbjct: 216 TTTLHAKAAVEW 227
>gi|440757101|ref|ZP_20936293.1| Aspartate racemase [Pantoea agglomerans 299R]
gi|436429171|gb|ELP26816.1| Aspartate racemase [Pantoea agglomerans 299R]
Length = 246
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 69/148 (46%), Gaps = 12/148 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE+AGA+ IV+ + H ++ +P LH+++ + +++A + ++G+
Sbjct: 87 LERAGAQFIVLCTNTMHKVAAQISAATDIPLLHIADATGRRIQQAGVH--------KVGL 138
Query: 221 LAKNAILTAGFYQEKLQHE-GFEVVLPDKAT--MEHTLIPALDALNRKDVEGARNLLRIA 277
LA + FY+ +L + G EV+ PD+A H +I L + +R R
Sbjct: 139 LATRFTMEQDFYRGRLHEQFGLEVITPDEADRLFVHEVIYQELCLGEIN-PASRRRYREI 197
Query: 278 LQVLLVRAVNTVILASDDMQDLLPPDDP 305
+Q L+ + +IL ++ L+ D
Sbjct: 198 MQRLVAQGAEAIILGCTEITLLVDATDA 225
>gi|395006986|ref|ZP_10390771.1| aspartate racemase [Acidovorax sp. CF316]
gi|394314983|gb|EJE51821.1| aspartate racemase [Acidovorax sp. CF316]
Length = 230
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 79/175 (45%), Gaps = 28/175 (16%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSH--DRSSFSSLNC 138
T+G++GG S +ST + +L +E PL + +LL H D +
Sbjct: 2 KTIGLIGGMSWEST----AEYYRLMNQEVRTRL----GPLRSAQLLIHSVDFGPIAQAQH 53
Query: 139 KGGGVQLDDS--LIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+G + DD+ L+ + RR L AGA IV+ + H + +PFLH++
Sbjct: 54 EG---RWDDAGELLAGSARR----LHAAGADAIVLCTNTMHKLAGTIAAATPLPFLHIAA 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKL-QHEGFEVVLPDKAT 250
V + ++ ++ R+G+LA + F ++KL Q G +VV PD T
Sbjct: 107 PVGEAARQCGLR--------RLGLLATAFTMEQPFLKDKLAQDHGLQVVTPDAPT 153
>gi|254247766|ref|ZP_04941087.1| Aspartate racemase [Burkholderia cenocepacia PC184]
gi|124872542|gb|EAY64258.1| Aspartate racemase [Burkholderia cenocepacia PC184]
Length = 230
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 108/252 (42%), Gaps = 34/252 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQ----LSGEENDFPFLLCSDPLLNKELL--SHDRSSFS 134
T+G++GG S +S+ + + L G ++ +L + E L +HD ++
Sbjct: 2 KTIGLIGGMSWESSAEYYRMINRHSKALHGGHHNAKSVLVTVDFAEIEALQRTHDWAAL- 60
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
G ++ D+ R+ LE AGA +V+ + H HD + ++PFLH+
Sbjct: 61 -------GERMADAA------RQ---LEAAGADLVVLTTNTMHRVHDAIEAAVTLPFLHI 104
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEH 253
++ L+ A ++ R+ +L + FY +L+ + G +V++PD+ +
Sbjct: 105 ADPTGSALRAAGVE--------RVALLGTRYTMELPFYAARLREKFGLDVLVPDERGRDD 156
Query: 254 TLIPALDALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCID 312
D L + E +R+ + L R VIL ++ L+ DD L D
Sbjct: 157 VHRIIYDELCHGVISEESRSTYVSIIDGLAQRGAQAVILGCTEITLLIGADDSPL-PVFD 215
Query: 313 PMDALARSTIKW 324
A++ ++W
Sbjct: 216 TTALHAKAAVEW 227
>gi|398884587|ref|ZP_10639518.1| aspartate racemase [Pseudomonas sp. GM60]
gi|398194145|gb|EJM81227.1| aspartate racemase [Pseudomonas sp. GM60]
Length = 230
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 98/228 (42%), Gaps = 20/228 (8%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +S+ +L+ + PL + +LL + +
Sbjct: 2 RTIGLIGGMSWESSAEYY-RLINQQVRDR-------LGPLRSAKLLMYSVDFGPVEQAQH 53
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
G D +LI+ + R+ LE GA C+V+ + H ++ ++PFLH+++
Sbjct: 54 AGRWDDAALILVDAARR---LEAGGADCVVLCTNTMHKVAGQIQAAINIPFLHIAD---- 106
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALD 260
A ++AG+ L +G+L + F +E+L G V++P + D
Sbjct: 107 ---PAGQAAVDAGA-LNVGLLGTAFTMEQDFLKERLTSMGLTVLVPGAEERQAVHRIIYD 162
Query: 261 ALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLL 307
L + E +R + + ++ L R +IL ++ L+ P+ L
Sbjct: 163 ELCVGVISEASRRIYQQVIESLHQRGAQVIILGCTEIGLLIKPEHSTL 210
>gi|312142817|ref|YP_003994263.1| aspartate racemase [Halanaerobium hydrogeniformans]
gi|311903468|gb|ADQ13909.1| aspartate racemase [Halanaerobium hydrogeniformans]
Length = 231
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 101/227 (44%), Gaps = 23/227 (10%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+ ++GG S +S+L L Q +E P S ++ + S D + F L +G
Sbjct: 2 KTIALIGGMSWESSLEYYRMLNQFVKKELGEPH---SAEII---MYSVDFAEFEKLQHQG 55
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
L + +I L+ LEKAG +++ + H EV ++P LH+++ +
Sbjct: 56 QWELLTEKMIEIALK-----LEKAGGDILLICTNTMHKMAAEVEAAINIPLLHIADSAGE 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQ-HEGFEVVLPDKATME--HTLIP 257
+KE + ++ +L + FY+++L+ + EV++P+ E H +I
Sbjct: 111 SIKEMGLN--------KVALLGTKFTMEEDFYKKRLKDNYQLEVLIPEAEEREIIHNVIY 162
Query: 258 ALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
+ ++ E +R + ++ L R V+L ++ L+ +D
Sbjct: 163 Q-ELISGIIKEQSRTKFKKIIEALKTRGAEGVVLGCTEIPLLIKDED 208
>gi|411002892|ref|ZP_11379221.1| aspartate racemase [Streptomyces globisporus C-1027]
Length = 233
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 70/147 (47%), Gaps = 13/147 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
++ AGA +++ + H D V SVP +H+++ A ++ A ++ ++G+
Sbjct: 71 VQSAGADMVLICTNTMHKVADTVASAVSVPLVHLADATADAVRAAGVR--------KVGL 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKA--TMEHTLIPALDALNRKDVEGA-RNLLRIA 277
L + FY+ +L+ G +V +PD A + H +I L +V A R R
Sbjct: 123 LGTAFTMEQDFYRGRLRDRGLDVRVPDAAGRALVHEVI--YGELCLGEVRAASREAYREI 180
Query: 278 LQVLLVRAVNTVILASDDMQDLLPPDD 304
++ L+ VIL +++ L+ P+D
Sbjct: 181 IRGLVADGAEGVILGCTEIELLIGPED 207
>gi|431792836|ref|YP_007219741.1| aspartate racemase [Desulfitobacterium dichloroeliminans LMG
P-21439]
gi|430783062|gb|AGA68345.1| aspartate racemase [Desulfitobacterium dichloroeliminans LMG
P-21439]
Length = 229
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 72/146 (49%), Gaps = 11/146 (7%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE AGA I++ + H DE+ G ++P LH+++ A+ + ++K +G+
Sbjct: 71 LEAAGADFILICTNTMHKVADEIQAGINIPILHIADITAQHVLANDIKT--------VGL 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATME--HTLIPALDALNRKDVEGARNLLRIAL 278
L + FY+ +L +G +V++P E +T+I L K V+ +R R +
Sbjct: 123 LGTKYTMEQDFYKSRLVAKGIKVLIPKDIDREIVNTVIYNELCLG-KIVDESRAKYRRII 181
Query: 279 QVLLVRAVNTVILASDDMQDLLPPDD 304
+ L+ + +IL ++ L+ P+D
Sbjct: 182 EGLIEQGAEGIILGCTEIGLLVKPED 207
>gi|295681452|ref|YP_003610026.1| aspartate racemase [Burkholderia sp. CCGE1002]
gi|295441347|gb|ADG20515.1| aspartate racemase [Burkholderia sp. CCGE1002]
Length = 488
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 28/177 (15%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLR-IG 219
LE GA I +PC+ +H + + + VP +++ + L+E+ LR +G
Sbjct: 317 LETGGADLIAIPCNTAHAFVERIQPYLGVPIVNMLTVTVRYLRESF-------PALRSVG 369
Query: 220 VLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGA-------RN 272
VLA + L +G YQ+ L+ +G V+P A +DA+ K A +
Sbjct: 370 VLATSGTLASGVYQKALESQGLRQVVPAPALQARV----MDAIYGKAGVKAGFTAGQCQQ 425
Query: 273 LLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLL-------KKCIDPMDALARSTI 322
L A+ L+ V ++L ++ LL +P + +DP D LA+ +
Sbjct: 426 DLAAAIDGLIAEGVEVIVLGCTELPLLL--REPYVIGANGARVSIVDPTDVLAKQCV 480
>gi|294787311|ref|ZP_06752564.1| aspartate racemase [Parascardovia denticolens F0305]
gi|315227130|ref|ZP_07868917.1| aspartate racemase [Parascardovia denticolens DSM 10105 = JCM
12538]
gi|294484667|gb|EFG32302.1| aspartate racemase [Parascardovia denticolens F0305]
gi|315119580|gb|EFT82713.1| aspartate racemase [Parascardovia denticolens DSM 10105 = JCM
12538]
Length = 241
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 164 AGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAK 223
AGA IV+ C+ +H ++D VP H+ + +++ P A R+G +A
Sbjct: 76 AGASFIVLTCNTAHYFYDRFQALTPVPIFHMPRRAVSRM--SSLYP--AARCPRVGFMAT 131
Query: 224 NAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNL 273
AG YQ++++ G+ V PD+ ++AL +DV+G+ L
Sbjct: 132 EGSRKAGVYQKEIEAAGYTYVEPDEDLQRQ-----INALIYQDVKGSGKL 176
>gi|229135597|ref|ZP_04264377.1| amino-acid racemase [Bacillus cereus BDRD-ST196]
gi|228647870|gb|EEL03925.1| amino-acid racemase [Bacillus cereus BDRD-ST196]
Length = 217
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 77/163 (47%), Gaps = 18/163 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE G I MPC+ +H++ +E+ + ++P L++ + K + E N K R+ +
Sbjct: 63 LESTGVDFIAMPCNTAHLYFEELQRSITIPILNIVDETLKAIPE-NTK--------RVAL 113
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQV 280
LA A + A YQ+ + E + ++ + + + + ++E AR L + L +
Sbjct: 114 LATEATVQASIYQDGITKRDIEYIHNEQ--WQEMINQIITCIKGGEIEEARKLWSL-LVL 170
Query: 281 LLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIK 323
L ++T I+A D+ ++ D +D LA++ ++
Sbjct: 171 QLKDEIDTAIIACTDLNVVVSED------FVDSAQCLAKAGVR 207
>gi|448579118|ref|ZP_21644395.1| aspartate racemase [Haloferax larsenii JCM 13917]
gi|445723797|gb|ELZ75433.1| aspartate racemase [Haloferax larsenii JCM 13917]
Length = 248
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE GA ++M + H ++ S+PF+H+ + A + +A + +GV
Sbjct: 83 LEAGGADFVIMATNTMHKVAPDITDALSIPFVHIVDAAADAILDAGIDT--------VGV 134
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDV-EGARNLLRIALQ 279
L + + FY+E+ G ++V+PD+A E + L + ++ + +R+ +
Sbjct: 135 LGTSVTMEDAFYRERFAQHGIDIVVPDEADREDVDRIVFEELTKGEIRDASRDRYLEVVD 194
Query: 280 VLLVRAVNTVILASDDMQDLLPPDD 304
L+ + V+L +++ L+ D
Sbjct: 195 DLVEQGAEGVVLGCTEIEQLIDQAD 219
>gi|343526520|ref|ZP_08763470.1| aspartate racemase domain protein [Streptococcus constellatus
subsp. pharyngis SK1060 = CCUG 46377]
gi|343394471|gb|EGV07019.1| aspartate racemase domain protein [Streptococcus constellatus
subsp. pharyngis SK1060 = CCUG 46377]
Length = 144
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 182 EVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGF 241
++ K ++P LH+++ A+ L E ++ ++G+L +T FY+EKL G
Sbjct: 7 QIQKQIAIPILHIAQATAEALLENGIQ--------KVGLLGTKYTMTQDFYKEKLLEAGL 58
Query: 242 EVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIAL 278
EV++PD+A + D L D++G+ +A+
Sbjct: 59 EVLIPDQAGITEVNRIIYDELCLGDIKGSSKQAYLAI 95
>gi|254522508|ref|ZP_05134563.1| aspartate racemase [Stenotrophomonas sp. SKA14]
gi|219720099|gb|EED38624.1| aspartate racemase [Stenotrophomonas sp. SKA14]
Length = 230
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 98/228 (42%), Gaps = 25/228 (10%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEE-NDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
T+G++GG S +S+ + +L EE D S LL L S D + L
Sbjct: 2 KTLGLIGGMSWESS----AQYYRLINEEIRDRLGGAHSAQLL---LWSVDFAGIKQLQHD 54
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G L D + + RR L+ GA +++ + H D + C +P LH+++ A
Sbjct: 55 GDWDALGDHM-ADAARR----LQAGGADLLLICTNTMHKLTDRIEAACPLPLLHIADPTA 109
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATME--HTLI 256
+ +A + R+G+L + FY+ +LQ G EV++PD H +I
Sbjct: 110 NAIVQAGAR--------RVGLLGTAFTMEQDFYRGRLQERFGLEVLVPDAEDRRSVHDII 161
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
+ + E +R + + L+ R +IL ++ L+ P+D
Sbjct: 162 YQ-ELIAGVVSEQSRRVYAAVIARLIARGAEAIILGCTEIMLLVRPED 208
>gi|315125973|ref|YP_004067976.1| aspartate racemase [Pseudoalteromonas sp. SM9913]
gi|315014487|gb|ADT67825.1| aspartate racemase [Pseudoalteromonas sp. SM9913]
Length = 231
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 79/167 (47%), Gaps = 20/167 (11%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGG 141
T+G++GG S +ST + L + G +N L + + +S D + +L +G
Sbjct: 3 TIGMLGGMSWESTASYYKVLNE--GVKNSLGGLHSAKICM----VSVDFAKIEALQHQG- 55
Query: 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
D + L + +E GA +++ + H DE+ ++P LH+++ A++
Sbjct: 56 ----DWQQTAKLLTKAAKSVEAGGAEFLLICTNTMHKVADEIASNITIPILHIADATAEQ 111
Query: 202 LKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPD 247
LK N+ R+G+L + FY+E+L ++ EV++P+
Sbjct: 112 LKHDNIT--------RVGLLGTQFTMEQNFYKERLTNKHNIEVLIPE 150
>gi|380302855|ref|ZP_09852548.1| putative aspartate racemase [Brachybacterium squillarum M-6-3]
Length = 229
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 15/132 (11%)
Query: 177 HIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKL 236
H+ +D+V SVP LH+++ A L A + R+G+L + + FY+E+L
Sbjct: 87 HVVYDQVAAAVSVPVLHLADATAARLTGAGLD--------RVGLLGTSFTMEQPFYRERL 138
Query: 237 QHEGFEVVLP---DKATMEHTLIPALDALNRKDV-EGARNLLRIALQVLLVRAVNTVILA 292
G ++P D+A + H +I + L R V + +R R + L+ + +IL
Sbjct: 139 AERGVTALVPGDEDRAEV-HRVI--YEELVRGVVADRSREAYRAVIARLVEQGSQGIILG 195
Query: 293 SDDMQDLLPPDD 304
+++ L+ P+D
Sbjct: 196 CTEIELLIGPED 207
>gi|365131420|ref|ZP_09341832.1| aspartate racemase [Subdoligranulum sp. 4_3_54A2FAA]
gi|363618789|gb|EHL70130.1| aspartate racemase [Subdoligranulum sp. 4_3_54A2FAA]
Length = 238
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 100/244 (40%), Gaps = 29/244 (11%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
+GI+GG +T+ L + + D + D ++N + DR+S+ G
Sbjct: 9 LGILGGLGPMATVYFYEMLTRHTQAARDQDHI---DVIINSRATTPDRTSY----ILGQS 61
Query: 143 VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKEL 202
+ ++ + R F GA I +PC+ +H ++D + + +P L+ +
Sbjct: 62 AENPFDIMAADAARLVTF----GADVIAIPCNTAHYFYDRLNETIPIPILN--------M 109
Query: 203 KEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDAL 262
E + +AG R+G+LA + YQ + G +PD A +D +
Sbjct: 110 VEETVLAAKAGGSARVGILATTGTVRTRTYQRMCEKHGLPCAVPDDAAQA----AVMDVI 165
Query: 263 NRKDVEGAR----NLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALA 318
D++ R + A L + + IL ++ L+ D+ L +D M+ LA
Sbjct: 166 Y-GDIKQGRPANMDAFERAAASLRSQGCDRAILGCTELS-LIKRDEGLGAFYLDSMEVLA 223
Query: 319 RSTI 322
R+ I
Sbjct: 224 RNAI 227
>gi|346312874|ref|ZP_08854409.1| hypothetical protein HMPREF9022_00066 [Erysipelotrichaceae
bacterium 2_2_44A]
gi|345906025|gb|EGX75759.1| hypothetical protein HMPREF9022_00066 [Erysipelotrichaceae
bacterium 2_2_44A]
Length = 236
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 15/148 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE AGA I++ + H ++ +P +H+++ A+EL N+ R+G+
Sbjct: 71 LEGAGADFILICTNTMHKVAPQIASMIHIPIIHIADATAEELLNHNIH--------RVGL 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATME---HTLIPALDALN-RKDVEGARNLLRI 276
L +T FY++KL G EV++P+ +E H + L +KD +R +
Sbjct: 123 LGTKYTMTQDFYKQKLVERGIEVIVPEATEIEVINHIIFHELCVGQIKKD---SRKKFQS 179
Query: 277 ALQVLLVRAVNTVILASDDMQDLLPPDD 304
++ + R VIL ++ L+ D
Sbjct: 180 IIERMKSRGAEGVILGCTEIGLLIHRSD 207
>gi|294102242|ref|YP_003554100.1| aspartate racemase [Aminobacterium colombiense DSM 12261]
gi|293617222|gb|ADE57376.1| aspartate racemase [Aminobacterium colombiense DSM 12261]
Length = 228
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 25/168 (14%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNC 138
++GI+GG S+ ST+ + L E N +P ++ S D F+ L
Sbjct: 4 SIGILGGISLASTIQYYKTITDLYYERNKDYYYPEMVIK---------SLDFQYFTDLEN 54
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
+ + D IV+ ++ LE AGA +M + H D+V + +P + + E
Sbjct: 55 ERRTEEYID-YIVKGIKS----LESAGADFAIMAANSPHSVFDKVVEKVELPIISIVETT 109
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
AK+ E N+K + L G+ + FYQ+ L+ EV+ P
Sbjct: 110 AKKAVELNLKKV-----LLTGI---KYTMQGRFYQDGLEKYDIEVITP 149
>gi|390957634|ref|YP_006421391.1| aspartate racemase [Terriglobus roseus DSM 18391]
gi|390412552|gb|AFL88056.1| aspartate racemase [Terriglobus roseus DSM 18391]
Length = 229
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 19/169 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+GI+GG S ST +L + E L S LL + L D + L KG
Sbjct: 2 KTIGILGGMSAASTQTYYRELCSRTRERLGG---LHSPELLIRSL---DFARIEELQMKG 55
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
D L R+ LE+ GA +++ + H +E+ +G ++P LH+++ A
Sbjct: 56 DWASAGDIL-----NREARALERGGADFLLLATNTMHKLAEEMMRGVTIPLLHIADATAA 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
+ ++ SP G++A + FY ++L G ++P +A
Sbjct: 111 SIVSKGLQ-----SP---GLMATAFTMEQTFYTDRLIAAGLAPIIPKEA 151
>gi|254456471|ref|ZP_05069900.1| aspartate racemase [Candidatus Pelagibacter sp. HTCC7211]
gi|207083473|gb|EDZ60899.1| aspartate racemase [Candidatus Pelagibacter sp. HTCC7211]
Length = 248
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 100/220 (45%), Gaps = 15/220 (6%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND--FPFLLCSD----PLLNKELLSHDRSSFSSL 136
+GI+GG + L+ KL L+ + D +P L + P + + RS +
Sbjct: 2 IGILGGMGTQAGLDFCNKLAILNRGKIDQEYPLFLLYNKSNIPGRPESIGIQTRSLSNKS 61
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
K ++ + ++++L R LEK + IV+PC+ +H W D++ K ++ +++ +
Sbjct: 62 TNKVSKIKYNK--VLKSLLRGCKLLEKNKCKFIVIPCNTAHYWFDDLQKKVNISIINMPK 119
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
V K K+ +IG+LA L G Y ++ +++V P + + ++
Sbjct: 120 EVFKFTKQ------NCKKNSKIGLLATEGTLNTGVYHN-FFNKNYDLVQPSQTLQKKSVN 172
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDM 296
A+ + +V+ A ++ A+ LL +IL ++
Sbjct: 173 KAIKLVKMGNVKAAAKAIKPAINSLLKMKCKKIILGCTEL 212
>gi|240948955|ref|ZP_04753311.1| RacX protein [Actinobacillus minor NM305]
gi|240296770|gb|EER47381.1| RacX protein [Actinobacillus minor NM305]
Length = 230
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 39/186 (20%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKEL-------LSHDRSSFS 134
T+GI+GG S +ST++ + L + +N+ L L F+
Sbjct: 3 TLGILGGMSPESTVS----------------YYLAINRAVNQHLGGNASAKLMISSVDFA 46
Query: 135 SL-NC-KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFL 192
+ C K G Q ++ E+ + LE+ G I++ + H ++ SVPFL
Sbjct: 47 EIVQCQKSGDWQKAGEILAEHAKS----LEQTGVDGILLATNTMHKVAKQIIDSISVPFL 102
Query: 193 HVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
H+ +CVA +K+ N+ ++ +L ++ FY++ L G ++P+ T +
Sbjct: 103 HILDCVANRIKQQNLT--------KVALLGTAFTMSDNFYRDGLAERGITAIVPEIETQQ 154
Query: 253 --HTLI 256
H +I
Sbjct: 155 EIHRII 160
>gi|149377025|ref|ZP_01894776.1| Aspartate racemase [Marinobacter algicola DG893]
gi|149358683|gb|EDM47154.1| Aspartate racemase [Marinobacter algicola DG893]
Length = 231
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 73/174 (41%), Gaps = 29/174 (16%)
Query: 81 NTVGIVGGASVDSTLNLL-----GKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSS 135
T+G++GG S +ST G +L G L S L+ L S D + +
Sbjct: 2 KTIGLLGGMSWESTQTYYRLINEGVKSRLGG--------LHSAKLV---LYSVDFAEIEA 50
Query: 136 LNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195
L +G D L + L+ AGA +++ + H E+ +P LH++
Sbjct: 51 LQHQG-----DWPATARILSSAALSLQNAGADFLMIGTNTMHKVAPEIELAVRIPLLHIA 105
Query: 196 ECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKA 249
+ A L E + R+G+L + FY+E+L+ G EVV PD A
Sbjct: 106 DATANVLTEDGIT--------RVGLLGTRFTMEQAFYRERLEAAGIEVVTPDAA 151
>gi|399024311|ref|ZP_10726353.1| aspartate racemase [Chryseobacterium sp. CF314]
gi|398080711|gb|EJL71510.1| aspartate racemase [Chryseobacterium sp. CF314]
Length = 226
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 72/148 (48%), Gaps = 14/148 (9%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
L+K+GA IV+ + +H++ D++ + +P +H+ AK + + K ++G+
Sbjct: 67 LKKSGADGIVLCANTAHLFADQLQETIKLPIIHIGAETAKAINKEGYK--------KVGL 118
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKA----TMEHTLIPALDALNRKDVEGARNLLRI 276
L + FY+ KL+ EV++P+K +++T+ L + + E N + I
Sbjct: 119 LGTKFTMEMDFYKNKLEEYNLEVLIPEKQETRDYIQYTVKEEL-GIGYINPETKTNYISI 177
Query: 277 ALQVLLVRAVNTVILASDDMQDLLPPDD 304
+ L+ + +IL ++ L+ DD
Sbjct: 178 -VNDLINQGAECIILGCTEIPMLISQDD 204
>gi|423597948|ref|ZP_17573948.1| aspartate racemase [Bacillus cereus VD078]
gi|401238150|gb|EJR44592.1| aspartate racemase [Bacillus cereus VD078]
Length = 224
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 76/163 (46%), Gaps = 18/163 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE G I MPC+ +H++ +E+ + ++P L++ + K + E N K R+ +
Sbjct: 70 LESTGVDFIAMPCNTAHLYFEELQRSITIPILNIVDETLKAIPE-NTK--------RVAL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQV 280
LA A + A YQ + E + ++ + + + + ++E AR L + L +
Sbjct: 121 LATEATVQASIYQGGITKRDIEYIHNEQ--WQEMINQIITCIKGGEIEEARKLWSL-LVL 177
Query: 281 LLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIK 323
L V+T I+A D+ ++ D +D LA++ ++
Sbjct: 178 QLKDEVDTAIIACTDLNVVVSED------FVDSAQCLAKAVVR 214
>gi|152968015|ref|YP_001363799.1| aspartate racemase [Kineococcus radiotolerans SRS30216]
gi|151362532|gb|ABS05535.1| aspartate racemase [Kineococcus radiotolerans SRS30216]
Length = 233
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 19/170 (11%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
+GI+GG S +ST L L Q G L + ++ + D ++ L G
Sbjct: 4 IGIIGGMSWESTAEYLRSLNQ--GVRERLGGLHSARLVVA----TVDFAAVEPLQVAGRW 57
Query: 143 VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKEL 202
+ D L E LE AGA +++ + H D V SVP LH+++ A +
Sbjct: 58 GEAGDLLAAEAR-----GLEAAGADLLLIATNTMHRVFDAVAGAVSVPVLHLADVTAVAV 112
Query: 203 KEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
+ A + R+G+LA + FY+ +L G ++P +A E
Sbjct: 113 RAAGLS--------RVGLLATRYTMEQDFYRARLAEGGVTTIVPGEADRE 154
>gi|323491837|ref|ZP_08097012.1| aspartate racemase [Vibrio brasiliensis LMG 20546]
gi|323313972|gb|EGA67061.1| aspartate racemase [Vibrio brasiliensis LMG 20546]
Length = 230
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 20/167 (11%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGG 141
T+GI+GG S +ST +L Q G + L + +LN S D + +L G
Sbjct: 3 TIGIIGGMSWESTATYYQQLNQ--GIKQAKGGLHSAKIILN----SVDFAQVEALQRSGD 56
Query: 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
+ D L + +EKAGA I++ + H ++V + ++P LH+++ E
Sbjct: 57 WLANADILC-----QAAQSIEKAGADFILIATNTMHKVAEQVEESVNLPLLHIADATGSE 111
Query: 202 LKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPD 247
LK+ + ++G+L + FY+++L + G EVV+P+
Sbjct: 112 LKQQGIT--------KVGLLGTVFTMEQDFYKQRLTDKFGIEVVVPN 150
>gi|429116710|ref|ZP_19177628.1| Aspartate racemase [Cronobacter sakazakii 701]
gi|449307010|ref|YP_007439366.1| hypothetical protein CSSP291_02395 [Cronobacter sakazakii SP291]
gi|426319839|emb|CCK03741.1| Aspartate racemase [Cronobacter sakazakii 701]
gi|449097043|gb|AGE85077.1| hypothetical protein CSSP291_02395 [Cronobacter sakazakii SP291]
Length = 233
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 22/169 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
TVG++GG S +ST+ +L+ G + L + +LL H C+
Sbjct: 2 KTVGLLGGMSWESTIPYY-RLIN-EGVRDRL------GGLHSAQLLLHSVDFHDIEACQA 53
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
G + E L + + LE+AGA+ IV+ + H ++ C++PFLH+++ +
Sbjct: 54 SG---EWEKAGEMLAQAALGLERAGAQAIVLCTNTMHKVAHQIEARCALPFLHIADATGR 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEV--VLPD 247
+ +A ++ ++ +L + FY+ +L+ EGF V ++PD
Sbjct: 111 AIAQAGLR--------QVALLGTRYTMEQAFYRARLE-EGFGVTSLIPD 150
>gi|421140365|ref|ZP_15600378.1| aspartate racemase [Pseudomonas fluorescens BBc6R8]
gi|404508424|gb|EKA22381.1| aspartate racemase [Pseudomonas fluorescens BBc6R8]
Length = 231
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 98/231 (42%), Gaps = 23/231 (9%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +S+ + Q ++ PL + +LL + +
Sbjct: 2 RTIGLIGGMSWESSAEYYRIINQNVRDQ--------LGPLRSAQLLMYSVDFGPVEQAQH 53
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
G D +LI+E+ R+ L+ GA CIV+ + H+ + S+PFLH+++
Sbjct: 54 AGRWDDAALILEDAARR---LQAGGAECIVLCTNTMHLVAPRIEAAVSIPFLHIADAAGA 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALD 260
EA L +G+L + F + +L +G V++PD + +
Sbjct: 111 AAVEAG--------TLSVGLLGTAFTMEQEFLKSRLAAQGLTVLVPDAEERQAVHRIIYE 162
Query: 261 ALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPP---DDPLL 307
L + + +R + + ++ L R +IL ++ L+ P D PLL
Sbjct: 163 ELCVGVISDASREVYQRVIESLAARGAQAIILGCTEISLLIKPQHSDLPLL 213
>gi|167773019|ref|ZP_02445072.1| hypothetical protein ANACOL_04408 [Anaerotruncus colihominis DSM
17241]
gi|167664952|gb|EDS09082.1| aspartate racemase [Anaerotruncus colihominis DSM 17241]
Length = 229
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 27/171 (15%)
Query: 81 NTVGIVGGASVDSTLN---LLGKLVQLS-GEENDFPFLLCSDPLLNKELLSHDRSSFSSL 136
T+G++GG S +ST+ ++ + V+ + G + LLCS H+ +F +
Sbjct: 2 KTIGLIGGMSWESTVTYYQIINETVRKALGGLHSAKCLLCSVDF-------HEIEAFQA- 53
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
G + L+ + R L +AGA CIV+ + H +V S+P +H+++
Sbjct: 54 ---SGAWEQSGELLADAART----LARAGADCIVICTNTMHKVAGQVQAAVSIPLIHIAD 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD 247
A L +A + +L +T FY+ +L G +V+ P+
Sbjct: 107 ATADTLTDAGIHTA--------ALLGTKYTMTQDFYKARLTSRGIDVLTPE 149
>gi|387902681|ref|YP_006333020.1| Aspartate racemase [Burkholderia sp. KJ006]
gi|387577573|gb|AFJ86289.1| Aspartate racemase [Burkholderia sp. KJ006]
Length = 230
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 106/253 (41%), Gaps = 36/253 (14%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLS-----GEENDFPFLLCSDPLLNKELLSHDRSSFSS 135
T+G++GG S +S+ + + S G N L+ D E+ + R+
Sbjct: 2 KTIGLIGGMSWESSAEYYRMINRYSKALHGGHHNAKSVLVTVD---FAEIEALQRAQ--- 55
Query: 136 LNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195
+ + G ++ D+ RR LE AGA IV+ + H HD + ++PFLH++
Sbjct: 56 -DWRALGERMADAA-----RR----LEAAGADLIVLTTNTMHRVHDAIEAAVTLPFLHIA 105
Query: 196 ECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATME-- 252
+ L+ A ++ R+ +L + FY ++L+ G +V +PD+
Sbjct: 106 DPTGNALRAAGVE--------RVALLGTRYTMELPFYAQRLRDRFGLDVRVPDEPARADV 157
Query: 253 HTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLL-PPDDPLLKKCI 311
H +I R D + + I + L R VIL ++ L+ D PL
Sbjct: 158 HRIIYDELCHGRIDAQSRATYVAI-IDELARRGAQAVILGCTEITLLIGDADSPL--PVF 214
Query: 312 DPMDALARSTIKW 324
D A++ ++W
Sbjct: 215 DTTTLHAKAAVEW 227
>gi|317484334|ref|ZP_07943255.1| aspartate racemase [Bilophila wadsworthia 3_1_6]
gi|316924412|gb|EFV45577.1| aspartate racemase [Bilophila wadsworthia 3_1_6]
Length = 250
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 75/180 (41%), Gaps = 29/180 (16%)
Query: 77 LNQANTVGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSF 133
+ Q +GIVGG + L+L KL + E D P +L S P E R +F
Sbjct: 1 MRQDERIGIVGGVGPHAGLDLTRKLFDHTRAEADQEHLPVMLYSFPDRIGE-----RPAF 55
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSH---IWHDEVCK----G 186
+ ++ E L +AGA I MPC+ +H I + K G
Sbjct: 56 LLGKTADNPGEAIGDIMAE--------LARAGATVIGMPCNTAHSPRILDAALEKLNATG 107
Query: 187 CSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
V F+H+ + V + +++ G R+G+L+ A L YQ+ L+ G E + P
Sbjct: 108 RPVRFVHMIDAVVRHVRQ------RCGEGARVGILSTLATLETRLYQDSLERAGLEALHP 161
>gi|21231234|ref|NP_637151.1| resistance protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66768759|ref|YP_243521.1| resistance protein [Xanthomonas campestris pv. campestris str.
8004]
gi|21112881|gb|AAM41075.1| putative resistance protein [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66574091|gb|AAY49501.1| putative resistance protein [Xanthomonas campestris pv. campestris
str. 8004]
Length = 234
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 27/170 (15%)
Query: 81 NTVGIVGGASVDSTLNLL----GKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSL 136
T+G++GG S +STL L G + LL S + E L H +
Sbjct: 6 KTIGLIGGMSWESTLPYYRIINQHLRHACGGLHSAKLLLYSVNFHDIERLQH------AG 59
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+ +G G + + L+ GA IV+ + H D + +P LH+++
Sbjct: 60 DWEGAG---------QAMATAARALQAGGADFIVLCTNTMHCVADAITAATPLPLLHIAD 110
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
A L A + LR+G+L + FY+E+L+ G +V++P
Sbjct: 111 ATADALVAAGI--------LRVGLLGTRFTMEQPFYRERLEARGLDVLVP 152
>gi|423489925|ref|ZP_17466607.1| aspartate racemase [Bacillus cereus BtB2-4]
gi|423495648|ref|ZP_17472292.1| aspartate racemase [Bacillus cereus CER057]
gi|423497557|ref|ZP_17474174.1| aspartate racemase [Bacillus cereus CER074]
gi|401150141|gb|EJQ57604.1| aspartate racemase [Bacillus cereus CER057]
gi|401162488|gb|EJQ69844.1| aspartate racemase [Bacillus cereus CER074]
gi|402430244|gb|EJV62322.1| aspartate racemase [Bacillus cereus BtB2-4]
Length = 224
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 76/163 (46%), Gaps = 18/163 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE G I MPC+ +H++ +E+ + ++P L++ + K + E N K R+ +
Sbjct: 70 LESTGVDFIAMPCNTAHLYFEELQRSITIPILNIVDETLKAIPE-NTK--------RVAL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQV 280
LA A + A YQ+ + E + ++ + + + + ++E R L + L +
Sbjct: 121 LATEATVQASIYQDGITKRDIEYIHNEQ--WQEMINQIITCIKGGEIEETRKLWSL-LVL 177
Query: 281 LLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIK 323
L V+T I+A D+ ++ D +D LA++ ++
Sbjct: 178 QLKDEVDTAIIACTDLNVVVSED------FVDSAQCLAKAVVR 214
>gi|334125455|ref|ZP_08499444.1| aspartate racemase [Enterobacter hormaechei ATCC 49162]
gi|333386918|gb|EGK58122.1| aspartate racemase [Enterobacter hormaechei ATCC 49162]
Length = 230
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 95/225 (42%), Gaps = 21/225 (9%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +ST+ +L+ ++ L + LL H C+
Sbjct: 2 KTIGLLGGMSWESTIPYY-RLINEGVKQR-------LGGLHSASLLLHSVDFHEIEACQS 53
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
GG + D + + L + LE+AGA+ I++ + H + CS+PFLH+++ +
Sbjct: 54 GG-EWDKA--GQMLADAALGLERAGAQGILLCTNTMHKVASHIEDRCSLPFLHIADATGR 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEHTLIPAL 259
++ M R+ +L + FY+ +L + G E ++PD+A
Sbjct: 111 AIRATGMT--------RVALLGTRYTMEQDFYRGRLSSQFGIESLIPDEADRARINQIIF 162
Query: 260 DALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPD 303
D L E +R ++ L + VI ++ L+P D
Sbjct: 163 DELCLGTFSETSRAWYVSVIEKLAQQGAEGVIFGCTEIGLLVPTD 207
>gi|332304391|ref|YP_004432242.1| aspartate racemase [Glaciecola sp. 4H-3-7+YE-5]
gi|410641016|ref|ZP_11351541.1| hypothetical protein GCHA_1777 [Glaciecola chathamensis S18K6]
gi|332171720|gb|AEE20974.1| aspartate racemase [Glaciecola sp. 4H-3-7+YE-5]
gi|410139376|dbj|GAC09728.1| hypothetical protein GCHA_1777 [Glaciecola chathamensis S18K6]
Length = 230
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 25/227 (11%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGG 141
T+G++GG S +ST + Q E N L S L+ L S D + + L KG
Sbjct: 3 TIGMLGGMSWESTAQYYRLINQ---EVNHRLKGLHSASLI---LRSVDFENIAFLQQKG- 55
Query: 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
D + L + + LEKAGA +++ + H E+ SVP LH+++ A+
Sbjct: 56 ----DWKEAGKILSEEAINLEKAGADFLLICTNTMHKVAPEITASISVPVLHIADTTAEV 111
Query: 202 LKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLP---DKATMEHTLIP 257
L++ N+ R+G+L + FY +L ++ G EV+ P D+A + + +
Sbjct: 112 LQQENIS--------RVGLLGTAFTMEQSFYTSRLTNKFGIEVITPNADDRAVVHNIIYQ 163
Query: 258 ALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
L KD E + L I + L VIL ++ L+ D
Sbjct: 164 ELCKGKIKD-ESRKKYLNI-ISALAADGCQGVILGCTEISLLVKQID 208
>gi|228993503|ref|ZP_04153412.1| amino-acid racemase [Bacillus pseudomycoides DSM 12442]
gi|228766218|gb|EEM14863.1| amino-acid racemase [Bacillus pseudomycoides DSM 12442]
Length = 235
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 12/140 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE G I MPC+ +H++ E+ SVP L++ + KE+ + K + +
Sbjct: 78 LENTGVDFIAMPCNTAHLYFYELQNSISVPILNMVDETIKEIPDHVRK---------VAL 128
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQV 280
LA +A + +G YQ+ + G + + K + + + + + D+ A R L +
Sbjct: 129 LATDATVQSGIYQDGIAKRGMDYI--HKNSWQTAITQIISNIKIGDLPDATKSWR-TLCI 185
Query: 281 LLVRAVNTVILASDDMQDLL 300
L V+ VI+A D+ +L
Sbjct: 186 ELAETVDGVIIACTDLNVVL 205
>gi|422343115|ref|ZP_16424043.1| hypothetical protein HMPREF9432_00103 [Selenomonas noxia F0398]
gi|355378422|gb|EHG25602.1| hypothetical protein HMPREF9432_00103 [Selenomonas noxia F0398]
Length = 230
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 16/104 (15%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE+AGA IV+ + H E+ + +P LH+++ A +LK+ ++ ++G+
Sbjct: 71 LERAGADYIVICTNTMHKVAPEIGRNIHIPILHIADMTAVQLKKHGIR--------KVGL 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNR 264
L + FY+ L +G EV++P+ A +D +NR
Sbjct: 123 LGTKYTMQQDFYKNILIEQGIEVLIPNDA--------GVDIVNR 158
>gi|307250562|ref|ZP_07532504.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 4 str.
M62]
gi|307252943|ref|ZP_07534831.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|307263975|ref|ZP_07545576.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 13 str.
N273]
gi|306857378|gb|EFM89492.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 4 str.
M62]
gi|306859581|gb|EFM91606.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|306870664|gb|EFN02407.1| Aspartate racemase [Actinobacillus pleuropneumoniae serovar 13 str.
N273]
Length = 220
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 13/123 (10%)
Query: 136 LNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195
+NC+ G D E L ++ LE+AGA I++ + H + + SVPFLH+
Sbjct: 40 VNCQKSG---DWQKAGEILVQQAKLLEQAGAEGILLATNTMHKVASPIVEAISVPFLHIL 96
Query: 196 ECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME--H 253
+ VA +K + + +L ++ FY + L+ G ++PD+ T + H
Sbjct: 97 DAVADSIKAKGLT--------TVALLGTAFTMSGNFYVDGLRQRGITPLVPDEQTQQEIH 148
Query: 254 TLI 256
+I
Sbjct: 149 RII 151
>gi|377809883|ref|YP_005005104.1| aspartate racemase [Pediococcus claussenii ATCC BAA-344]
gi|361056624|gb|AEV95428.1| aspartate racemase [Pediococcus claussenii ATCC BAA-344]
Length = 232
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 100/230 (43%), Gaps = 33/230 (14%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSH----DRSSFSSLNC 138
+G +G + +S + LL K +++ LN L++H DRS++ N
Sbjct: 8 IGGMGTPATESYIRLLNKRTPAHRDQD----------YLNYVLVNHASVPDRSTYLMDNS 57
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
K ++E++R + K + V+ C+ +H ++D++ K +P +H+
Sbjct: 58 KPNPY----PDLLEDIRDQ----SKLSPKFFVIACNTAHYFYDDLQKATEIPIVHMPRET 109
Query: 199 AKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPA 258
K++++ ++G++ + G Y +L+ G EV+ P + + T
Sbjct: 110 VKDIQK------RFPEVKKVGIIGTPGTTSDGIYDRELEAVGLEVIKPTQELQDMTSELI 163
Query: 259 LDALNRKDVEGARNLLRIALQVLL-VRAVNTVILASDDM---QDLLPPDD 304
D + ++ E +L + LQ ++ R VIL ++ Q++ P D
Sbjct: 164 FDDIKAQN-EVDADLFHVILQRMIEERGAEVVILGCTELSYAQEIAPDHD 212
>gi|409202784|ref|ZP_11230987.1| hypothetical protein PflaJ_15684 [Pseudoalteromonas flavipulchra
JG1]
Length = 238
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 29/130 (22%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
L+ AG+ IV+ + H DE+ +P LH+++ AK LK +K RI +
Sbjct: 71 LKLAGSDAIVICTNTMHKISDEISAASGLPVLHIADATAKRLKNDGIK--------RIAL 122
Query: 221 LAKNAILTAGFYQEKLQH-EGFEVVLPD--------------------KATMEHTLIPAL 259
L + FY+ +LQ G EV+ PD A+ T + +
Sbjct: 123 LGTRFTMQQDFYKARLQDLHGIEVITPDGDQQALVHNIIYDELCRGKVNASSRQTYLDII 182
Query: 260 DALNRKDVEG 269
DAL ++ EG
Sbjct: 183 DALYQQGAEG 192
>gi|328956897|ref|YP_004374283.1| aspartate racemase [Carnobacterium sp. 17-4]
gi|328673221|gb|AEB29267.1| aspartate racemase [Carnobacterium sp. 17-4]
Length = 234
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 11/88 (12%)
Query: 169 IVMPCHLSHIWHDEVCKGCSVPFLH-VSECVAKELKEANMKPLEAGSPLRIGVLAKNAIL 227
IVMPC+ +H + +++ S+P ++ + E VA + + + +IG+ L
Sbjct: 80 IVMPCNTAHYFINDLIDATSIPIINMIKETVAT---------IPSNTTKKIGLAVTQGTL 130
Query: 228 TAGFYQEKLQHEGFEVVLPDKATMEHTL 255
+ Y+ +L G+EV+LPD T++H +
Sbjct: 131 ESQLYERELLFNGYEVILPD-TTLQHKI 157
>gi|88799349|ref|ZP_01114927.1| putative resistance proteins [Reinekea blandensis MED297]
gi|88777888|gb|EAR09085.1| putative resistance proteins [Reinekea sp. MED297]
Length = 233
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 111/250 (44%), Gaps = 24/250 (9%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
+G++GG S +ST L + + G L +D L++ S D L +G
Sbjct: 4 LGLLGGMSWEST-ALYYQWIN-EGVREAMGGLHSADLLVS----SVDFHQIERLQDQG-- 55
Query: 143 VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKEL 202
Q D++ L ++ V L+ AGA +V+ + H D++ + +P LH+++C A +
Sbjct: 56 -QWDEA--GRTLAQRAVELKAAGAEGLVIATNTMHKVADQITQESQLPLLHIADCTADVI 112
Query: 203 KEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVL--PDKATMEHTLIPAL 259
+ + R+ +L + FY+ +L + G +V++ PD+ H +I
Sbjct: 113 VQQGRQ--------RVALLGTAFTMEQDFYRARLTEKYGLDVLIPEPDERADVHRIIYNE 164
Query: 260 DALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALAR 319
L +++ + + IA Q L R VIL ++ LL ++ ID A+
Sbjct: 165 LCLGKQNADSQARYVEIA-QRLQSRGAEAVILGCTEI-TLLLTEEVTEVPLIDTTRIHAQ 222
Query: 320 STIKWVKSAE 329
++W+ + E
Sbjct: 223 QAVQWMLNGE 232
>gi|398380306|ref|ZP_10538424.1| aspartate racemase [Rhizobium sp. AP16]
gi|397721622|gb|EJK82170.1| aspartate racemase [Rhizobium sp. AP16]
Length = 239
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEAN-MKPLEAGSPLRIG 219
L+ AGA C+++ + H+ EV SVP +++ + A LK A +KPL
Sbjct: 71 LQAAGAECVLICTNTMHLIAQEVAARISVPLINIIDETAAALKAAGRVKPL--------- 121
Query: 220 VLAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLI 256
+LA + GFY +++ G +++P D T+ H +I
Sbjct: 122 LLATRYTMEHGFYADRMARNGVSIMVPGADDRTLVHDII 160
>gi|399088964|ref|ZP_10753679.1| aspartate racemase [Caulobacter sp. AP07]
gi|398030080|gb|EJL23513.1| aspartate racemase [Caulobacter sp. AP07]
Length = 236
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Query: 162 EKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVL 221
E+ GA +V+ + H + +VP LH+++ A+ ++ A + R+G+L
Sbjct: 75 ERGGADFLVLCTNTMHRCAPAIEDAVAVPLLHIADPTAEAIRAAGLS--------RVGLL 126
Query: 222 AKNAILTAGFYQEKLQHE-GFEVVLP---DKATMEHTLIPALDALNRKDVEGARNLLRIA 277
+ FY+ +L+ G EV++P D+A + L + + ++ +R++ R
Sbjct: 127 GTAFTMEQDFYRGRLERRFGLEVLIPGPEDRAAAHGIIYREL--VTGQVLDASRDVYRAV 184
Query: 278 LQVLLVRAVNTVILASDDMQDLLPPDD 304
+Q L+ R VIL ++ L+ +D
Sbjct: 185 IQRLVARGAQGVILGCTEIMLLIGQED 211
>gi|170733497|ref|YP_001765444.1| aspartate racemase [Burkholderia cenocepacia MC0-3]
gi|169816739|gb|ACA91322.1| aspartate racemase [Burkholderia cenocepacia MC0-3]
Length = 230
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 107/252 (42%), Gaps = 34/252 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQ----LSGEENDFPFLLCSDPLLNKELL--SHDRSSFS 134
T+G++GG S +S+ + + L G ++ +L + E L +HD ++
Sbjct: 2 KTIGLIGGMSWESSAEYYRMINRHSKTLHGGHHNAKSVLVTVDFAEIEALQRTHDWAAL- 60
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
G ++ D+ R+ LE AGA +V+ + H HD + ++PFLH+
Sbjct: 61 -------GERMADAA------RQ---LEAAGADLVVLTTNTMHRVHDAIEAAVTLPFLHI 104
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEH 253
++ L+ A ++ R+ +L + FY +L+ + G +V++PD+ +
Sbjct: 105 ADPTGSALRAAGVE--------RVALLGTRYTMELPFYAARLREKFGLDVLVPDERGRDD 156
Query: 254 TLIPALDALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCID 312
D L + E +R + L R VIL ++ L+ DD L D
Sbjct: 157 VHRIIYDELCHGVISEESRATYVSIIDELARRGAQAVILGCTEITLLIGADDSPL-PVFD 215
Query: 313 PMDALARSTIKW 324
A++ ++W
Sbjct: 216 TTALHAKAAVEW 227
>gi|420369009|ref|ZP_14869740.1| hypothetical protein SF123566_10200 [Shigella flexneri 1235-66]
gi|391321780|gb|EIQ78497.1| hypothetical protein SF123566_10200 [Shigella flexneri 1235-66]
Length = 235
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 26/171 (15%)
Query: 81 NTVGIVGGASVDSTL---NLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLN 137
T+G++GG S +ST+ L+ + V+ S L + ++L H
Sbjct: 2 KTIGLLGGMSWESTIPYYRLINEGVKQS-----------LGGLHSAKILLHSVDFHEIEA 50
Query: 138 CKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC 197
C+ G D E L + V L++AGA IV+ + H + + C VPFLH+++
Sbjct: 51 CQSNG---DWPRAGEILAQAAVGLQQAGAEGIVLCTNTMHKVAEAIETACDVPFLHIADA 107
Query: 198 VAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPD 247
+ +++ M + +L + FY+ +LQ E G ++PD
Sbjct: 108 TGRAIQQQKMS--------NVALLGTRYTMEQDFYRGRLQTEFGISTLIPD 150
>gi|262039857|ref|ZP_06013130.1| aspartate racemase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|330011202|ref|ZP_08307021.1| aspartate racemase [Klebsiella sp. MS 92-3]
gi|424931949|ref|ZP_18350321.1| Aspartate racemase [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|259042762|gb|EEW43760.1| aspartate racemase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|328534256|gb|EGF60874.1| aspartate racemase [Klebsiella sp. MS 92-3]
gi|407806136|gb|EKF77387.1| Aspartate racemase [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
Length = 253
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 30/173 (17%)
Query: 81 NTVGIVGGASVDSTLNLL-----GKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSS 135
T+G++GG S +ST+ G +L G L S L+ + HD +
Sbjct: 18 KTIGLLGGMSWESTIPYYRLINEGVKARLGG--------LHSASLVLHSVDFHDIEA--- 66
Query: 136 LNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195
C+ G D E L V L++AGA IV+ + H D + C VPFLH++
Sbjct: 67 --CQSAG---DWDRAGEILAEAAVGLQQAGAEGIVLCTNTMHKVADAIAARCQVPFLHIA 121
Query: 196 ECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPD 247
+A + + A R+ +L + FY+ +LQ + E ++P+
Sbjct: 122 --------DATGRAIAAKGQRRVALLGTRYTMEQTFYRGRLQEQFAIETLIPE 166
>gi|429097767|ref|ZP_19159873.1| Aspartate racemase [Cronobacter dublinensis 582]
gi|426284107|emb|CCJ85986.1| Aspartate racemase [Cronobacter dublinensis 582]
Length = 233
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 98/229 (42%), Gaps = 27/229 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
TVG++GG S +ST+ +L+ G + L + +LL H C+
Sbjct: 2 KTVGLLGGMSWESTIPYY-RLIN-EGVRDRL------GGLHSAQLLLHSVDFHEIEACQA 53
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
G + E L + + LE+AGA+ IV+ + H ++ CS+PFLH+++ +
Sbjct: 54 SG---EWEKAGEMLAQAALGLERAGAQAIVLCTNTMHKVAHQIEARCSLPFLHIADATGR 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEV--VLPD---KATMEHTL 255
+K A + ++ +L + FY+ +L EGF V ++PD +A + +
Sbjct: 111 AIKAAGLA--------QVALLGTRYTMEQDFYRARLS-EGFGVQTLIPDEPARARINQII 161
Query: 256 IPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
L L + E R + + +L VI ++ LL D
Sbjct: 162 FEEL-CLGKTTAESKRYYQQ-QIDILAADGAQGVIFGCTEIGLLLGAQD 208
>gi|383755623|ref|YP_005434526.1| putative aspartate racemase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381367675|dbj|BAL84503.1| putative aspartate racemase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 236
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 114/264 (43%), Gaps = 44/264 (16%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSG---EENDFPFLL---CSDPLLNKELLSHDRSSFS 134
T+GI+GG +T++L+ K++ + ++ P L+ C+ P DR+
Sbjct: 2 KTIGIMGGMGPMATVDLMRKIIMATPARCDQEHIPMLVDNNCTIP---------DRTR-- 50
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
KG G + V+ +R L AGA I++ C+ +H + E+ ++P L +
Sbjct: 51 --AIKGLGASPAPEM-VKTAKR----LMMAGADFIIIACNTAHYFLPEILPQITIPVLSI 103
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHT 254
+ E + +G+LA + ++ G YQ+ L+ +G + + P A +H
Sbjct: 104 IDVTIASAWEKGYR--------SVGLLATSGTISTGLYQDGLEAKGIQCIAP-SAEKQH- 153
Query: 255 LIPAL--DALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQ---DLLPPDDPLLKK 309
LI L D + + +R L+ + V+ IL ++ D+ L
Sbjct: 154 LIDDLIYDGVKSTNKAYDTTAVRELLKEMQVQGAEAFILGCTEVPVAVDMY----GLEGT 209
Query: 310 CIDPMDALARSTIKWVK-SAEKGT 332
ID D LA++ +K+ K A GT
Sbjct: 210 FIDSTDELAKAAVKFAKMEATDGT 233
>gi|357419255|ref|YP_004932247.1| aspartate racemase [Thermovirga lienii DSM 17291]
gi|355396721|gb|AER66150.1| aspartate racemase [Thermovirga lienii DSM 17291]
Length = 231
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 102/247 (41%), Gaps = 33/247 (13%)
Query: 83 VGIVGG---ASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLL---NKELLSHDRSSFSSL 136
+G++GG A+ L LL + +++ L S+P + + +L F
Sbjct: 9 LGVLGGMGPAATAEFLRLLATMAPAQRDQDHPKIYLLSNPQIPDRTQAILGAGEDPFG-- 66
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
LI E L L K GA + +PC+ +H + D++ P +H+
Sbjct: 67 ------------LIKEGLET----LAKWGAHILAVPCNTAHFFIDKMGDLLPAPLVHI-- 108
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLI 256
V L EA K E G+ L LA + G Y +GF++ P+ ++ T+
Sbjct: 109 -VTSTLDEALNKD-ERGAWL----LATEGTIKTGLYDAHASQKGFQLYKPNP-NVQRTIT 161
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDA 316
A+ A+ + A+ LR A++ L VI A ++ ++ I ++A
Sbjct: 162 SAITAVKEGRPDKAKKALRNAVEELWSEQDLPVIAACTELPIAYEAASLPKERMISSLEA 221
Query: 317 LARSTIK 323
LAR+ IK
Sbjct: 222 LARACIK 228
>gi|401765059|ref|YP_006580066.1| racemase [Enterobacter cloacae subsp. cloacae ENHKU01]
gi|400176593|gb|AFP71442.1| racemase [Enterobacter cloacae subsp. cloacae ENHKU01]
Length = 230
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 20/169 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +ST+ +L+ G + L + LL+ + SS
Sbjct: 2 KTIGLIGGMSWESTIPYY-RLIN-EGVKQRLGGLHSASLLLHSVDFHEIEACQSSGEWDK 59
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
G L D+ + LE+AGA+ I++ + H + CS+PFLH+++ +
Sbjct: 60 AGEILADAALG---------LERAGAQGILLCTNTMHKVASHIEARCSLPFLHIADATGR 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDK 248
++ + M R+ +L + FY+ +L E G E ++PD+
Sbjct: 111 AIRSSGMS--------RVALLGTRYTMEQDFYRGRLHSEFGIESLIPDE 151
>gi|167577770|ref|ZP_02370644.1| aspartate racemase [Burkholderia thailandensis TXDOH]
Length = 226
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 152 ENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLE 211
+ L R+ E GA +V+ + H + SVPF+H+ + A+ L+ A ++
Sbjct: 58 DELGRRMRQAEAGGADFVVLCTNTMHKVAPAIEAALSVPFVHIVDPTARALRRAGVR--- 114
Query: 212 AGSPLRIGVLAKNAILTAGFYQEKL-QHEGFEVVLPDK--ATMEHTLIPALDALNRKDVE 268
R G+L + A FY+E++ G +V++PD+ + H +I D L V
Sbjct: 115 -----RAGLLGTRFTMEAAFYRERMASRHGIDVIVPDERDRAVIHDVI--YDELCHGVVR 167
Query: 269 GA-RNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLL 307
A R+ R ++ L VIL ++ L+ P+D L
Sbjct: 168 DASRDAYRRIIESLEAAGAQGVILGCTEIALLIGPEDSAL 207
>gi|152971773|ref|YP_001336882.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|365140314|ref|ZP_09346369.1| aspartate racemase [Klebsiella sp. 4_1_44FAA]
gi|378980478|ref|YP_005228619.1| aspartate racemase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|386036380|ref|YP_005956293.1| putative racemase [Klebsiella pneumoniae KCTC 2242]
gi|419975631|ref|ZP_14491039.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH1]
gi|419978883|ref|ZP_14494177.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH2]
gi|419986721|ref|ZP_14501850.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH4]
gi|419990648|ref|ZP_14505618.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH5]
gi|419996510|ref|ZP_14511312.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH6]
gi|420002384|ref|ZP_14517036.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH7]
gi|420008402|ref|ZP_14522892.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH8]
gi|420014256|ref|ZP_14528563.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH9]
gi|420019679|ref|ZP_14533871.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH10]
gi|420025275|ref|ZP_14539284.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
gi|420030849|ref|ZP_14544673.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
gi|420036561|ref|ZP_14550220.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
gi|420042651|ref|ZP_14556143.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
gi|420048577|ref|ZP_14561890.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
gi|420054338|ref|ZP_14567512.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
gi|420061659|ref|ZP_14574644.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH19]
gi|420065614|ref|ZP_14578419.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH20]
gi|420072324|ref|ZP_14584963.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH21]
gi|420077021|ref|ZP_14589489.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
gi|420085631|ref|ZP_14597848.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
gi|421912523|ref|ZP_16342238.1| Aspartate racemase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|421914949|ref|ZP_16344575.1| Aspartate racemase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|424832221|ref|ZP_18256949.1| aspartate racemase family protein [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|425093144|ref|ZP_18496228.1| aspartate racemase [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
gi|428149458|ref|ZP_18997273.1| Uncharacterized protein YgeA of aspartate/glutamate/hydantoin
racemase family [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|428938510|ref|ZP_19011636.1| racemase [Klebsiella pneumoniae VA360]
gi|150956622|gb|ABR78652.1| putative aspartate racemase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|339763508|gb|AEJ99728.1| putative racemase [Klebsiella pneumoniae KCTC 2242]
gi|363653630|gb|EHL92579.1| aspartate racemase [Klebsiella sp. 4_1_44FAA]
gi|364519889|gb|AEW63017.1| aspartate racemase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|397342534|gb|EJJ35693.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH1]
gi|397346889|gb|EJJ40000.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH4]
gi|397350461|gb|EJJ43549.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH2]
gi|397365199|gb|EJJ57825.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH6]
gi|397365892|gb|EJJ58512.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH5]
gi|397371220|gb|EJJ63763.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH7]
gi|397378357|gb|EJJ70569.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH9]
gi|397383455|gb|EJJ75596.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH8]
gi|397388892|gb|EJJ80851.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH10]
gi|397397279|gb|EJJ88955.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
gi|397401082|gb|EJJ92714.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
gi|397406387|gb|EJJ97807.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
gi|397415116|gb|EJK06307.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
gi|397415698|gb|EJK06878.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
gi|397423156|gb|EJK14097.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
gi|397430170|gb|EJK20869.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH19]
gi|397431486|gb|EJK22162.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH20]
gi|397439300|gb|EJK29753.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH21]
gi|397446597|gb|EJK36811.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
gi|397449007|gb|EJK39160.1| putative racemase [Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
gi|405611486|gb|EKB84254.1| aspartate racemase [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
gi|410113502|emb|CCM84863.1| Aspartate racemase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|410122677|emb|CCM87200.1| Aspartate racemase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|414709661|emb|CCN31365.1| aspartate racemase family protein [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426305546|gb|EKV67666.1| racemase [Klebsiella pneumoniae VA360]
gi|427540566|emb|CCM93411.1| Uncharacterized protein YgeA of aspartate/glutamate/hydantoin
racemase family [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
Length = 237
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 30/173 (17%)
Query: 81 NTVGIVGGASVDSTLNLL-----GKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSS 135
T+G++GG S +ST+ G +L G L S L+ + HD +
Sbjct: 2 KTIGLLGGMSWESTIPYYRLINEGVKARLGG--------LHSASLVLHSVDFHDIEA--- 50
Query: 136 LNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195
C+ G D E L V L++AGA IV+ + H D + C VPFLH++
Sbjct: 51 --CQSAG---DWDRAGEILAEAAVGLQQAGAEGIVLCTNTMHKVADAIAARCQVPFLHIA 105
Query: 196 ECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPD 247
+ + + + R+ +L + FY+ +LQ + E ++P+
Sbjct: 106 DATGRAIAAKGQR--------RVALLGTRYTMEQTFYRGRLQEQFAIETLIPE 150
>gi|357417940|ref|YP_004930960.1| putative resistance protein [Pseudoxanthomonas spadix BD-a59]
gi|355335518|gb|AER56919.1| putative resistance protein [Pseudoxanthomonas spadix BD-a59]
Length = 230
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
L++ GA IV+ + H D + +P LH+++ A L A + R+G+
Sbjct: 71 LQEGGADFIVLCTNTMHKVADAITGATPLPLLHIADGTADALAAAGIT--------RVGL 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPD 247
L + FY+++L+ GFEV+ P+
Sbjct: 123 LGTRFTMEQDFYRQRLEARGFEVITPN 149
>gi|375087938|ref|ZP_09734282.1| aspartate racemase [Dolosigranulum pigrum ATCC 51524]
gi|374563440|gb|EHR34756.1| aspartate racemase [Dolosigranulum pigrum ATCC 51524]
Length = 243
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 5/112 (4%)
Query: 169 IVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILT 228
V+ C+ +H +HD++ +P LH+ + + P A PLR+ VL +
Sbjct: 80 FVLTCNTAHYFHDQLQAMTDIPILHMPRIAVQAIPSE--LPHSAEHPLRVSVLGTEGTMK 137
Query: 229 AGFYQEKLQHEGFEVVLPD---KATMEHTLIPALDALNRKDVEGARNLLRIA 277
G YQ+ ++ +G++ P +A + H + + R +V ++R A
Sbjct: 138 IGVYQQAVEAQGYQYCPPSVDLQAKITHLIYHEVKGHKRLNVALLEEIIRQA 189
>gi|206579517|ref|YP_002236732.1| racemase [Klebsiella pneumoniae 342]
gi|206568575|gb|ACI10351.1| aspartate racemase family protein [Klebsiella pneumoniae 342]
Length = 237
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 30/173 (17%)
Query: 81 NTVGIVGGASVDSTLNLL-----GKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSS 135
T+G++GG S +ST+ G +L G L S L+ + HD +
Sbjct: 2 KTIGLLGGMSWESTIPYYRLINEGVKARLGG--------LHSASLVLHSVDFHDIEA--- 50
Query: 136 LNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195
C+ G D E L V L++AGA IV+ + H D + C VPFLH++
Sbjct: 51 --CQSAG---DWDRAGEILAEAAVGLQQAGAEGIVLCTNTMHKVADAIAARCQVPFLHIA 105
Query: 196 ECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPD 247
+ + + + R+ +L + FY+ +LQ + E ++P+
Sbjct: 106 DATGRAIAAKGQR--------RVALLGTRYTMEQTFYRGRLQEQFAIETLIPE 150
>gi|350570695|ref|ZP_08939042.1| aspartate racemase [Neisseria wadsworthii 9715]
gi|349795085|gb|EGZ48890.1| aspartate racemase [Neisseria wadsworthii 9715]
Length = 229
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 20/174 (11%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGG 141
T+GI+GG S +ST++ Q+ E + L + + + S D + L K G
Sbjct: 3 TIGIIGGMSPESTVSYY----QIINRETNAR--LGGNHSADIVMHSIDFETIVRLQ-KVG 55
Query: 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
++ + R+ LE GA +V+ + H D + +P LHV + A+
Sbjct: 56 DWAGAGRILAASARK----LESMGADVLVLATNTMHKIADAIQSAVGIPLLHVVDTTAQA 111
Query: 202 LKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTL 255
+K + +G+L ++ GFY E+++ G E ++P T +HT+
Sbjct: 112 VKAQGLNT--------VGLLGTRFTMSDGFYTERMKQHGIETLVPAD-TQQHTV 156
>gi|357029894|ref|ZP_09091870.1| aspartate racemase [Mesorhizobium amorphae CCNWGS0123]
gi|355533783|gb|EHH03102.1| aspartate racemase [Mesorhizobium amorphae CCNWGS0123]
Length = 231
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 30/183 (16%)
Query: 81 NTVGIVGGASVDST---LNLLGKLVQLS-GEENDFPFLLCSDPLLNKELLSHDRSSFSSL 136
T+G++GG S +ST LL ++V+ G + LL S H+
Sbjct: 2 KTLGLLGGMSWESTAIYYRLLNEIVRKRLGGLHSAKLLLWSFDFAEIAERQHEG------ 55
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
+ +G GV L+ E R LE AGA+ +++ + H DEV S+P +H+++
Sbjct: 56 DWQGAGV-----LLAEAARG----LEAAGAQGLLVCTNTMHKLADEVQAAVSIPLIHIAD 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKAT--MEH 253
A +K+A +K R +LA + FY+ +L + G + V+PD+A M H
Sbjct: 107 ATAVAVKDAGVK--------RPALLATRFTMEQDFYKGRLAGKYGLQPVVPDQAGRDMVH 158
Query: 254 TLI 256
+I
Sbjct: 159 RVI 161
>gi|170703494|ref|ZP_02894257.1| aspartate racemase [Burkholderia ambifaria IOP40-10]
gi|170131600|gb|EDT00165.1| aspartate racemase [Burkholderia ambifaria IOP40-10]
Length = 230
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 11/166 (6%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE AGA +V+ + H H + ++PFLH+++ L+ A ++ R+ +
Sbjct: 71 LEAAGADLVVLTTNTMHRVHGAIEAAVALPFLHIADPTGAALRAAGVE--------RVAL 122
Query: 221 LAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIA-L 278
L + FY E+L+ + +V++PD+A D L ++ A + +A +
Sbjct: 123 LGTRYTMELPFYAERLRDKFDLDVLVPDEAARNDVHRIIYDELCHGVIDAASRAIYVAII 182
Query: 279 QVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIKW 324
L R VIL ++ L+ DD L D A + ++W
Sbjct: 183 DELAKRGAQAVILGCTEITLLIGADDSPL-PVFDTTALHAMAAVEW 227
>gi|152977916|ref|YP_001343545.1| aspartate racemase [Actinobacillus succinogenes 130Z]
gi|150839639|gb|ABR73610.1| aspartate racemase [Actinobacillus succinogenes 130Z]
Length = 231
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 152 ENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLE 211
E L + LE+AGA I++ + H + + SVPFLH+ + VA +K +
Sbjct: 62 EILAEQAKLLERAGADGILLATNTMHKVANRITDRISVPFLHILDVVANRIKARGLT--- 118
Query: 212 AGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDK 248
+ +L ++ FY++ L G ++PDK
Sbjct: 119 -----HVALLGTAFTMSDNFYRDGLTQRGINAIVPDK 150
>gi|410636309|ref|ZP_11346903.1| aspartate racemase [Glaciecola lipolytica E3]
gi|410143921|dbj|GAC14108.1| aspartate racemase [Glaciecola lipolytica E3]
Length = 231
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 23/226 (10%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGG 141
T+G++GG S +ST++ K+ Q ++ L + +L+ S D + L +G
Sbjct: 3 TIGLIGGMSWESTVSYYQKINQEVKQQ--LGGLHSAKIILH----SVDFAQIERLQHQGQ 56
Query: 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
++L E L LE+AGA CIV+ + H D + +P +H+++ AK
Sbjct: 57 WLEL-----AEILCGAAQGLERAGADCIVICTNTMHKVADRIQNTTQLPLIHIADATAKV 111
Query: 202 LKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATME--HTLIPA 258
L N+ ++G+L + FY +L + EV+ P + E H +I
Sbjct: 112 LLADNIN--------KVGLLGTRFTMEQDFYTGRLVDKFAIEVITPPEQDRELVHQIIYN 163
Query: 259 LDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
L + + L I +Q L + VIL ++ L+ P+D
Sbjct: 164 ELCLGQINPTSRAAYLNI-IQNLYEQGAQGVILGCTEIAMLVGPED 208
>gi|146312927|ref|YP_001178001.1| racemase [Enterobacter sp. 638]
gi|145319803|gb|ABP61950.1| aspartate racemase [Enterobacter sp. 638]
Length = 230
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 30/175 (17%)
Query: 81 NTVGIVGGASVDSTLNLL-----GKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSS 135
T+G++GG S +ST+ G +L G L + LL H
Sbjct: 2 KTIGLIGGMSWESTIPYYRLINEGIKQRLGG-------------LHSASLLLHSVDFHEI 48
Query: 136 LNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195
C+ G + D + + L + + LE+AGA+ I++ + H + CS+PFLH++
Sbjct: 49 EACQASG-EWDKA--GDMLAQAALGLERAGAQGILLCTNTMHKVASHIETRCSLPFLHIA 105
Query: 196 ECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKA 249
+ + + M+ R+ +L + FY+ +L+ + G E ++PD+A
Sbjct: 106 DATGRAIAATGMQ--------RVALLGTRYTMEQDFYRGRLETQFGIESIVPDEA 152
>gi|407069027|ref|ZP_11099865.1| aspartate racemase [Vibrio cyclitrophicus ZF14]
Length = 231
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 103/248 (41%), Gaps = 34/248 (13%)
Query: 82 TVGIVGGASVDSTLNLL-----GKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSL 136
T+G++GG S +ST++ G L G N + S E L H +
Sbjct: 3 TIGLLGGMSWESTMSYYKSINEGVKANLGG-LNSAKICMYSVNFDEIERLQHQGRWSETA 61
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196
N L + +EK GA I++ + H E+ + ++P LH+++
Sbjct: 62 NI---------------LSDAALSVEKGGADFILICTNTMHKVVPEIEEKITIPILHIAD 106
Query: 197 CVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEHTL 255
A+ L E +K ++G+L + FY+ +L ++ G VV+PD++ E
Sbjct: 107 TTAQILLEQGVK--------KVGLLGTAFTMEQDFYKARLVNKFGIGVVIPDESDREQVH 158
Query: 256 IPALDALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLP---PDDPLLKKCI 311
L R +V E +R++ R ++ L + VIL ++ L+ D PLL
Sbjct: 159 NIIYQELCRGEVKEESRDVYRQIIEKLSQQGAEAVILGCTEIALLIQQQHTDVPLLDTTS 218
Query: 312 DPMDALAR 319
DA R
Sbjct: 219 VHADAAVR 226
>gi|251797252|ref|YP_003011983.1| aspartate racemase [Paenibacillus sp. JDR-2]
gi|247544878|gb|ACT01897.1| aspartate racemase [Paenibacillus sp. JDR-2]
Length = 251
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 93/217 (42%), Gaps = 31/217 (14%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSH----DRSSFSSLNC 138
+G++GG +T +++ + E D ++ +L+H DR+S S L
Sbjct: 10 LGVIGGTGPKATSVFFDRVIAFTEAEAD-------QDHIDMIILNHASLPDRTS-SILER 61
Query: 139 KGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECV 198
K D + ++ LE A IVMPC+ +H + D++ ++P +++
Sbjct: 62 K-------DQQFLRLIQADIALLEHAEVSNIVMPCNTAHRFFDDIQAMTAIPIVNMVRET 114
Query: 199 AKEL---KEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTL 255
+EL +AN K IG+LA +A + Y + L+ G E +P + + +
Sbjct: 115 VEELLAKHKANRK---------IGILATDATIQTDIYSDVLRQYGLEPFIPSPSMQQSIM 165
Query: 256 IPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILA 292
+ + + +R L I ++L + V+LA
Sbjct: 166 SIIYEDIKKTGHSDSRVLEGIMTEMLQREKCDGVVLA 202
>gi|254251950|ref|ZP_04945268.1| Aspartate racemase [Burkholderia dolosa AUO158]
gi|124894559|gb|EAY68439.1| Aspartate racemase [Burkholderia dolosa AUO158]
Length = 230
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 109/255 (42%), Gaps = 40/255 (15%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQ-----LSGEENDFPFLLCSDPLLNKELL--SHDRSSF 133
T+G++GG S +S+ +L+ L G ++ +L + E L +HD ++
Sbjct: 2 KTIGLIGGMSWESSAEYY-RLINRHSKALHGGHHNAKSVLVTVDFAEIEALQRAHDWAAL 60
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
G ++ D+ RR LE AGA +V+ + H HD + ++PFLH
Sbjct: 61 --------GERMADAA-----RR----LEAAGAELVVLTTNTMHRVHDAIEAAVTLPFLH 103
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATME 252
+++ L++A + R+ +L + FY ++L+ + +V+ PD+ +
Sbjct: 104 IADPTGAALRDAGIG--------RVALLGTRYTMELPFYAQRLRDKFDIDVLTPDERQRD 155
Query: 253 HTLIPALDALNRKDVEGAR--NLLRIALQVLLVRAVNTVILASDDMQDLL-PPDDPLLKK 309
D L VE +RI ++ L R VIL ++ L+ D PL
Sbjct: 156 DVHRIIYDELCHGIVEAESRATYVRI-IESLAQRGAQAVILGCTEITLLIGSADSPL--P 212
Query: 310 CIDPMDALARSTIKW 324
D A++ ++W
Sbjct: 213 VFDTTALHAKAAVEW 227
>gi|451946154|ref|YP_007466749.1| aspartate racemase [Desulfocapsa sulfexigens DSM 10523]
gi|451905502|gb|AGF77096.1| aspartate racemase [Desulfocapsa sulfexigens DSM 10523]
Length = 241
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 102/254 (40%), Gaps = 43/254 (16%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
+GI+GG +STL+ ++ ++ +P ++ LN + + +L
Sbjct: 4 IGILGGLGPESTLDYYRTIIGAFNHQHRKLAYPEIIVYSANLNAFMQMVTNKDWPAL--- 60
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
++ L K FL GA + M + HI +EV +P L + E
Sbjct: 61 -----------IKWLLEKIRFLHNGGADFVAMASNTPHIVFEEVSAKAPLPLLSIVEATC 109
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP---DKATMEHTLI 256
+ +K +IG+L + + A FY++ EG +VV+P ++ + H L
Sbjct: 110 SRAQTMGLK--------KIGLLGTSLTMEADFYKKPFILEGIKVVVPTVEEQQLIHHRLF 161
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPD------------- 303
++ KD LL I ++ + +++VIL ++ LL D
Sbjct: 162 SEIELGIIKD-STRDELLAIIKRMKEQQQIDSVILGCTELPLLLTEDMGRIPFLNTSAIH 220
Query: 304 -DPLLKKCIDPMDA 316
+ ++K CI+ A
Sbjct: 221 CESIIKYCINDFQA 234
>gi|408481811|ref|ZP_11188030.1| aspartate racemase [Pseudomonas sp. R81]
Length = 229
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 101/233 (43%), Gaps = 27/233 (11%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +S+ + Q ++ PL + +LL + +
Sbjct: 2 RTIGLIGGMSWESSAEYYRIINQRVRDQ--------LGPLRSAQLLMYSVDFGPVEQAQH 53
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
G D +LI+E+ R+ L+ GA C+V+ + H+ + S+PFLH+++
Sbjct: 54 AGRWDDTALILEDAARR---LQAGGAECVVLCTNTMHLVAPRIEAAVSIPFLHIADAAGA 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLIPA 258
+A L +G+L + F + +L +G V++P D+ H +I
Sbjct: 111 AAVKAG--------TLTVGLLGTAFTMEQDFLKSRLTAQGLTVLVPEADERQAVHRII-- 160
Query: 259 LDALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPP---DDPLL 307
+ L + + +R + + ++ L R +IL ++ L+ P D PLL
Sbjct: 161 YEELCVGVISDASRQVYQGVIESLAARGAQAIILGCTEISLLIKPEHSDLPLL 213
>gi|228967857|ref|ZP_04128869.1| amino-acid racemase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|402563734|ref|YP_006606458.1| aspartate racemase [Bacillus thuringiensis HD-771]
gi|423358157|ref|ZP_17335660.1| aspartate racemase [Bacillus cereus VD022]
gi|228791823|gb|EEM39413.1| amino-acid racemase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|401086650|gb|EJP94872.1| aspartate racemase [Bacillus cereus VD022]
gi|401792386|gb|AFQ18425.1| aspartate racemase [Bacillus thuringiensis HD-771]
Length = 224
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 12/136 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE G I MPC+ +H++ +E+ + S+P L++ + + + E N K R+ +
Sbjct: 70 LESTGVSFIAMPCNTAHLYFEELQRSLSIPILNIVDETLQAIPE-NTK--------RVAL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQV 280
LA A + A YQ+ + E + +K + ++ + ++E AR L L +
Sbjct: 121 LATEATVQARIYQDGIAKRNIEYIHHEK--WQESINQIITCSKSGEIEEARELWN-TLVL 177
Query: 281 LLVRAVNTVILASDDM 296
L ++T I+A D+
Sbjct: 178 QLRDEIDTAIIACTDL 193
>gi|425075081|ref|ZP_18478184.1| aspartate racemase [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
gi|425083058|ref|ZP_18486155.1| aspartate racemase [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
gi|425085717|ref|ZP_18488810.1| aspartate racemase [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
gi|428935741|ref|ZP_19009198.1| racemase [Klebsiella pneumoniae JHCK1]
gi|405595284|gb|EKB68674.1| aspartate racemase [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
gi|405599377|gb|EKB72553.1| aspartate racemase [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
gi|405606588|gb|EKB79568.1| aspartate racemase [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
gi|426299848|gb|EKV62162.1| racemase [Klebsiella pneumoniae JHCK1]
Length = 237
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 30/173 (17%)
Query: 81 NTVGIVGGASVDSTLNLL-----GKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSS 135
T+G++GG S +ST+ G +L G L S L+ + HD +
Sbjct: 2 KTIGLLGGMSWESTIPYYRLINEGVKARLGG--------LHSASLVLHSVDFHDIEA--- 50
Query: 136 LNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195
C+ G D E L + L++AGA IV+ + H D + C VPFLH++
Sbjct: 51 --CQSAG---DWDRAGEILAEAAIGLQQAGAEGIVLCTNTMHKVADAIAARCQVPFLHIA 105
Query: 196 ECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPD 247
+ + + + R+ +L + FY+ +LQ + E ++P+
Sbjct: 106 DATGRAIAAKGQR--------RVALLGTRYTMEQTFYRGRLQEQFAIETLIPE 150
>gi|228997316|ref|ZP_04156938.1| Aspartate racemase [Bacillus mycoides Rock3-17]
gi|229004941|ref|ZP_04162668.1| Aspartate racemase [Bacillus mycoides Rock1-4]
gi|228756289|gb|EEM05607.1| Aspartate racemase [Bacillus mycoides Rock1-4]
gi|228762408|gb|EEM11333.1| Aspartate racemase [Bacillus mycoides Rock3-17]
Length = 243
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LEKAGA IV+ + H + S+P LH+++ A E+K+ ++ +G+
Sbjct: 74 LEKAGADFIVICTNTMHKVISNIKDKVSIPILHIADATAMEIKKQGIRS--------VGL 125
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
L + FY+ +++ +G V++P++ E
Sbjct: 126 LGTKYTMEQDFYKSRIEEKGMRVMIPNETDRE 157
>gi|456736802|gb|EMF61528.1| Aspartate racemase [Stenotrophomonas maltophilia EPM1]
Length = 230
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 35/233 (15%)
Query: 81 NTVGIVGGASVDSTLNLLGKLV-----QLSGEENDFPFLLCSDPLLNKELLSHDRSSFSS 135
T+G++GG S +S+ +L+ Q G + LL S + L HD
Sbjct: 2 KTLGLIGGMSWESSAQYY-RLINEDVRQRLGGAHSAQLLLWSVDFAPIKQLQHD------ 54
Query: 136 LNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195
G L D + VE RR L+ GA +++ + H D + C +P LH++
Sbjct: 55 ----GDWDALGDHM-VEAARR----LQAGGADLLLVCTNTMHTLADRIEAACPLPLLHIA 105
Query: 196 ECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLP---DKATM 251
+ A+ + +A + ++G+L + FY+ +LQ G EV++P D+ ++
Sbjct: 106 DPTAQAIVQAGAR--------KVGLLGTAFTMEQDFYRGRLQDRFGLEVLVPEADDRRSV 157
Query: 252 EHTLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
+ L A E +R + + L+ R +IL ++ L+ P+D
Sbjct: 158 HDIIYQELIAGVVS--EHSRQVYAGVIARLVARGAEAIILGCTEIMLLVRPED 208
>gi|78066918|ref|YP_369687.1| aspartate racemase [Burkholderia sp. 383]
gi|77967663|gb|ABB09043.1| Aspartate racemase [Burkholderia sp. 383]
Length = 230
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 103/252 (40%), Gaps = 34/252 (13%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQ----LSGEENDFPFLLCSDPLLNKELL--SHDRSSFS 134
T+G++GG S +S+ + + L G ++ +L + E L +HD ++
Sbjct: 2 KTIGLIGGMSWESSAEYYRMINRHSKALHGGHHNAKSVLVTVDFAEIEALQRTHDWAALG 61
Query: 135 SLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194
G QL E AGA +V+ + H D + ++PFLH+
Sbjct: 62 E-RMAGAARQL----------------EAAGADLVVLTTNTMHRVCDAIEAAVTLPFLHI 104
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEH 253
++ L++A ++ R+ +L + FY E+L+ + G EV++PD+ +
Sbjct: 105 ADPTGSALRDAGVE--------RVALLGTRYTMELPFYAERLRGKFGMEVLVPDERGRDD 156
Query: 254 TLIPALDALNRKDVE-GARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCID 312
D L + +R ++ L R VIL ++ L+ DD L D
Sbjct: 157 VHRIIYDELCHGIISPESRATYVTIIEELARRGAQAVILGCTEITLLIGADDSPL-PVFD 215
Query: 313 PMDALARSTIKW 324
A++ ++W
Sbjct: 216 TTALHAKAAVEW 227
>gi|228999539|ref|ZP_04159117.1| amino-acid racemase [Bacillus mycoides Rock3-17]
gi|229007097|ref|ZP_04164723.1| amino-acid racemase [Bacillus mycoides Rock1-4]
gi|228754142|gb|EEM03561.1| amino-acid racemase [Bacillus mycoides Rock1-4]
gi|228760250|gb|EEM09218.1| amino-acid racemase [Bacillus mycoides Rock3-17]
Length = 235
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 95/227 (41%), Gaps = 40/227 (17%)
Query: 83 VGIVGGASVDSTLNLLGKLVQ----LSGEEND--FPFLL---CSDPLLNKELLSHDRSSF 133
+GI+ G ST + +V+ + G ++D FP ++ C P + + H
Sbjct: 10 IGILAGMGPKSTGPFVDTVVEQCQKIYGAKHDMDFPHMMIYSCPTPFYMDKPIDHKAMEN 69
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
+ +N G Q LE G I MPC+ +H++ E+ SVP L+
Sbjct: 70 AIIN----GAQK---------------LENTGVDFIAMPCNTAHLYFYELQNLISVPILN 110
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
+ + KE+ + K + +LA +A + +G YQ+ + G + + K + +
Sbjct: 111 MVDETIKEIPDHVRK---------VALLATDATVQSGIYQDGIAKRGMDYI--HKNSWQT 159
Query: 254 TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLL 300
+ + + D+ A R L + L V+ VI+A D+ +L
Sbjct: 160 AITQIISNIKIGDLPDATKSWR-TLCIELAETVDGVIIACTDLNVVL 205
>gi|254470848|ref|ZP_05084251.1| aspartate racemase [Pseudovibrio sp. JE062]
gi|211959990|gb|EEA95187.1| aspartate racemase [Pseudovibrio sp. JE062]
Length = 212
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEAN-MKPLEAGSPLRIG 219
LE AGA CIV+ + H + G ++PF+H++E A +++ KPL
Sbjct: 44 LESAGADCIVICANTMHKVASYIQDGLTIPFIHIAETTATAIQKVKRRKPL--------- 94
Query: 220 VLAKNAILTAGFYQEKLQH-EGFEVVLPDKATMEHTLIPALDALNRKDV--EGARNLLRI 276
+LA ++ FY ++L+ G VV+PD A + L R + + R LL+I
Sbjct: 95 LLATRYLMEHDFYVKRLEELHGMSVVVPDNGGQAVVHDIAYNELCRGQINEDSRRTLLQI 154
Query: 277 ALQVLLVRAVNTVILASDDMQDLLPPDD 304
+ + ++VIL ++ L+ +D
Sbjct: 155 VRKA-QDQGADSVILGCTELGLLVGQED 181
>gi|357417945|ref|YP_004930965.1| putative resistance protein [Pseudoxanthomonas spadix BD-a59]
gi|355335523|gb|AER56924.1| putative resistance protein [Pseudoxanthomonas spadix BD-a59]
Length = 236
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
L+ GA IV+ + H D + + +P LH+++ A L A + R+G+
Sbjct: 77 LQAGGADFIVLCTNTMHKVADAITEATPLPLLHIADGTADALAAAGIT--------RVGL 128
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPD 247
L + FY+++L+ GFEV+ P+
Sbjct: 129 LGTRFTMEQDFYRQRLEARGFEVITPN 155
>gi|291086213|ref|ZP_06355123.2| aspartate racemase [Citrobacter youngae ATCC 29220]
gi|291068551|gb|EFE06660.1| aspartate racemase [Citrobacter youngae ATCC 29220]
Length = 231
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGG 141
T+G++GG S +ST+ +L+ G + L + LL+ + SS +
Sbjct: 4 TIGLLGGMSWESTIPYY-RLIN-EGVKQQLGGLHSAQILLHSVDFHEIEACQSSSDWDKA 61
Query: 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
G SL L + V L++AGA+ IV+ + H + + C VPFLH+++ +
Sbjct: 62 G-----SL----LAQAAVGLQQAGAQGIVLCTNTMHKVAEAIEAACDVPFLHIADATGRA 112
Query: 202 LKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPD 247
+++ M + +L + FY+ +LQ E G V+PD
Sbjct: 113 IQKRQMN--------NVALLGTRYTMEQDFYRGRLQAEFGINTVIPD 151
>gi|222098225|ref|YP_002532282.1| aspartate racemase family protein [Bacillus cereus Q1]
gi|221242283|gb|ACM14993.1| aspartate racemase family protein [Bacillus cereus Q1]
Length = 224
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 77/163 (47%), Gaps = 18/163 (11%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE G I MPC+ +H++ +E+ + S+P L++ + + + + N+K R+ +
Sbjct: 70 LESTGVDFIAMPCNTAHLYFEELQQSLSIPILNIVDETLQTIPK-NVK--------RVAL 120
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIALQV 280
LA A + AG YQ+ + + + +K + + + + ++E A L AL +
Sbjct: 121 LATEATVQAGIYQDGITKRDIQYIHHEK--WQEMINQIITWIKSGELEEAHELWN-ALVL 177
Query: 281 LLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIK 323
L V+T I+A D+ + D +D LA++ ++
Sbjct: 178 QLRDEVDTAIIACTDLNVVASED------FVDSSQCLAKAVVR 214
>gi|221633082|ref|YP_002522307.1| aspartate racemase [Thermomicrobium roseum DSM 5159]
gi|221156758|gb|ACM05885.1| aspartate racemase [Thermomicrobium roseum DSM 5159]
Length = 245
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 99/229 (43%), Gaps = 26/229 (11%)
Query: 77 LNQANTVGIVGGASVDSTLNLLGKLVQLSGEEND---FPFLLCSDPLLNKELLSHDRSSF 133
+ + + +GI+GG +T++L K+++ + E D ++ +DP + DR++
Sbjct: 1 MTRRSIIGILGGMGPLATVDLYRKIIEATPAERDQDHLHVIIDADPSIP------DRTA- 53
Query: 134 SSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193
GG L+ R LE+AGA IV+PC+ +H + V S+P L
Sbjct: 54 ---ALLTGGPDPTPWLLAGAQR-----LERAGADFIVVPCNTAHAFLPRVRASISIPIL- 104
Query: 194 VSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEH 253
S A + A + P GS +G+LA + + YQ+ L ++PD E
Sbjct: 105 -SMIAATAERAAAVAP--TGS--VVGLLATPGTIASRLYQQALAERRLRCIVPDPQWQER 159
Query: 254 -TLIPALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLP 301
T AL R D E A +L Q L+ +IL ++ + P
Sbjct: 160 VTEAIALVKAGRTDREVAALVLETGRQ-LIAHGAAALILGCTELPIVFP 207
>gi|359408446|ref|ZP_09200916.1| aspartate racemase [SAR116 cluster alpha proteobacterium HIMB100]
gi|356676640|gb|EHI48991.1| aspartate racemase [SAR116 cluster alpha proteobacterium HIMB100]
Length = 238
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 22/136 (16%)
Query: 81 NTVGIVGGASVDSTLNLL-----GKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSS 135
+T+G++GG S ST + G +L G L S PLL + S D + +
Sbjct: 2 HTIGLLGGMSWQSTTSYYQLINEGVQARLGG--------LHSAPLL---IYSFDFAEIET 50
Query: 136 LNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195
L G Q D + + L R+ V LE AGA I++ + H D + SVP LH++
Sbjct: 51 LQMAG---QWDAA--GQMLARQAVRLEAAGAEAIILATNTMHKLADYITDAVSVPLLHIA 105
Query: 196 ECVAKE-LKEANMKPL 210
E A L ++ +PL
Sbjct: 106 EATADAILTSSSRQPL 121
>gi|228991217|ref|ZP_04151175.1| Aspartate racemase [Bacillus pseudomycoides DSM 12442]
gi|228768441|gb|EEM17046.1| Aspartate racemase [Bacillus pseudomycoides DSM 12442]
Length = 243
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LEKAGA IV+ + H + S+P LH+++ A E+K+ ++ +G+
Sbjct: 74 LEKAGADFIVICTNTMHKVISNIKDKVSIPILHIADATAMEIKKQGIRS--------VGL 125
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATME 252
L + FY+ +++ +G V++P++ E
Sbjct: 126 LGTKYTMEQDFYKSRIEEKGMRVMIPNETDRE 157
>gi|295097389|emb|CBK86479.1| aspartate racemase [Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 230
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 94/225 (41%), Gaps = 21/225 (9%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +ST+ +L+ G + L + LL+ + SS
Sbjct: 2 KTIGLLGGMSWESTIPYY-RLIN-EGVKQRLGGLHSASLLLHSVDFHEIEACQSSGEWDK 59
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
G L D+ + LE+AGA+ I++ + H + CS+PFLH+++ +
Sbjct: 60 AGQMLADAALG---------LERAGAQGILLCTNTMHKVASHIEDRCSLPFLHIADATGR 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEHTLIPAL 259
++ A M R+ +L + FY+ +L + G E ++P++A
Sbjct: 111 AIRAAGMT--------RVALLGTRYTMEQDFYRGRLNSQFGIESLIPEEADRARINQIIF 162
Query: 260 DALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPD 303
D L E +R ++ L + VI ++ L+P D
Sbjct: 163 DELCLGTFSETSRAWYVSVIEKLAQQGAEGVIFGCTEIGLLVPAD 207
>gi|190575240|ref|YP_001973085.1| aspartate/glutamate racemase [Stenotrophomonas maltophilia K279a]
gi|190013162|emb|CAQ46794.1| putative aspartate/glutamate racemase [Stenotrophomonas maltophilia
K279a]
Length = 230
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 100/228 (43%), Gaps = 25/228 (10%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +S+ + +L EE L L S D + L +G
Sbjct: 2 KTLGLIGGMSWESS----AQYYRLINEE--VRRRLGGAHSAQLLLWSVDFAGIKQLQHEG 55
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
L D + V+ RR L+ GA +++ + H D + C++P LH+++ A+
Sbjct: 56 DWDTLGDHM-VDGARR----LQAGGADLLLICTNTMHKLTDRIEAACTLPLLHIADPTAQ 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLP---DKATMEHTLI 256
+ +A + ++G+L + FY+ +LQ G EV++P D+ ++ +
Sbjct: 111 AIVQAGAR--------KVGLLGTAFTMEQDFYRGRLQDRFGLEVLVPEANDRRSVHDIIY 162
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
L A E +R + + L+ R +IL ++ L+ P+D
Sbjct: 163 QELIAGVVS--EHSRQVYAGVIARLVARGAEAIILGCTEIMLLVRPED 208
>gi|424669551|ref|ZP_18106576.1| aspartate racemase [Stenotrophomonas maltophilia Ab55555]
gi|401071622|gb|EJP80133.1| aspartate racemase [Stenotrophomonas maltophilia Ab55555]
Length = 230
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 100/228 (43%), Gaps = 25/228 (10%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +S+ + +L EE L L S D + L +G
Sbjct: 2 KTLGLIGGMSWESS----AQYYRLINEE--VRRRLGGAHSAQLLLWSVDFAGIKQLQHEG 55
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
L D + V+ RR L+ GA +++ + H D + C++P LH+++ A+
Sbjct: 56 DWDTLGDHM-VDGARR----LQAGGADLLLICTNTMHKLTDRIEAACTLPLLHIADPTAQ 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLP---DKATMEHTLI 256
+ +A + ++G+L + FY+ +LQ G EV++P D+ ++ +
Sbjct: 111 AIVQAGAR--------KVGLLGTAFTMEQDFYRGRLQDRFGLEVLVPEADDRRSVHDIIY 162
Query: 257 PALDALNRKDVEGARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD 304
L A E +R + + L+ R +IL ++ L+ P+D
Sbjct: 163 QELIAGVVS--EHSRQVYAGVIARLVARGAEAIILGCTEIMLLVRPED 208
>gi|348173285|ref|ZP_08880179.1| aspartate racemase [Saccharopolyspora spinosa NRRL 18395]
Length = 246
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 77/173 (44%), Gaps = 25/173 (14%)
Query: 148 SLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANM 207
L+ E RR L+ AGA ++ C+ H+ D V G +PFLH+ + ++L +
Sbjct: 64 ELLAEQGRR----LKAAGADFFLLACNTVHVAGDIVENGVDLPFLHIVDPTGEQLIRQGI 119
Query: 208 KPLEAGSPLRIGVLAKNAILTAGFYQEKL-QHEGFEVVLPDKATMEHTLIPALDALNRKD 266
+ +G+L +T ++ ++L Q G EV++ + ++ +AL ++
Sbjct: 120 RT--------VGLLGSRYTMTGTYFVDRLKQRYGMEVLIAEDEHQDNV----HNALYQEL 167
Query: 267 VEGA-----RNLLRIALQVLLVRAVNTVILASDDMQDLLPPDD---PLLKKCI 311
+G R+ R A+ L R V+L + L+ +D PLL +
Sbjct: 168 AKGVFLDQTRDKFRAAIADLAARGAEAVVLGCTEFGMLVSQEDSPVPLLDTTV 220
>gi|126650720|ref|ZP_01722936.1| aspartate racemase [Bacillus sp. B14905]
gi|126592385|gb|EAZ86403.1| aspartate racemase [Bacillus sp. B14905]
Length = 232
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 23/168 (13%)
Query: 82 TVGIVGGASVDSTLNLLGKLV--QLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCK 139
T+G++GG S +S+ KL+ Q+ + C L S D +
Sbjct: 3 TIGLIGGMSWESSAEYY-KLLNEQIKQKLGGLHSATCI-------LYSVDFQQIEHFQAR 54
Query: 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA 199
G Q D + V L + LE+AGA IV+ + H + + ++P LH+++ A
Sbjct: 55 G---QWDKAGFV--LAQAAQSLEQAGADFIVICTNTMHKVVAVIEEAITIPILHIADATA 109
Query: 200 KELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPD 247
++KEA ++ +I +L + FY+ +++ G EV++PD
Sbjct: 110 NQIKEAGLQ--------KIALLGTMYTMEQEFYKSRVEGYGIEVIVPD 149
>gi|345300681|ref|YP_004830039.1| aspartate racemase [Enterobacter asburiae LF7a]
gi|345094618|gb|AEN66254.1| aspartate racemase [Enterobacter asburiae LF7a]
Length = 230
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 78/174 (44%), Gaps = 30/174 (17%)
Query: 81 NTVGIVGGASVDSTL---NLLGKLVQ--LSGEENDFPFLLCSDPLLNKELLSHDRSSFSS 135
T+G++GG S +ST+ L+ + V+ L G L + LL H
Sbjct: 2 KTIGLLGGMSWESTIPYYRLINEGVKRRLGG-------------LHSASLLLHSVDFHEI 48
Query: 136 LNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195
C+ G + D + E L + + LE+AGA I++ + H + CS+PFLH++
Sbjct: 49 EACQASG-EWDKA--GEILAQAALGLERAGAEGILLCTNTMHKVASHIESRCSLPFLHIA 105
Query: 196 ECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE-GFEVVLPDK 248
+ + + + M R+ +L + FY+ +L E G E ++PD+
Sbjct: 106 DATGRAITASGMT--------RVALLGTRYTMEQDFYRRRLSREFGIESLIPDE 151
>gi|311033066|ref|ZP_07711156.1| aspartate racemase family protein [Bacillus sp. m3-13]
Length = 229
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE GA IV+ + H +E+ ++P LH+++ A ++KE + +G+
Sbjct: 71 LEMGGADFIVICTNTMHKVVNEIQSKITIPLLHIADATAAQIKEKGINS--------VGL 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDV-EGARNLLRIALQ 279
L + FY+ +L+ G +V++P + E + L + E +R+ + +
Sbjct: 123 LGTRYTMEQDFYKSRLEMNGIKVIVPSEQEREIINKVIYEELCLGKIQEKSRDYYKKVIH 182
Query: 280 VLLVRAVNTVILASDDMQDLLPPDD 304
L+ +IL ++ L+ P D
Sbjct: 183 GLIESGAKGIILGCTEIGLLVKPGD 207
>gi|395497457|ref|ZP_10429036.1| aspartate racemase [Pseudomonas sp. PAMC 25886]
Length = 231
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 98/231 (42%), Gaps = 23/231 (9%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKG 140
T+G++GG S +S+ +++ S + PL + +LL + +
Sbjct: 2 RTIGLIGGMSWESSAEYY-RIINQSVRDQ-------LGPLRSAQLLVYSVDFGPMEQAQH 53
Query: 141 GGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAK 200
G D +LI+E+ R+ L+ GA CIV+ + H+ + S+PFLH+++
Sbjct: 54 AGRWDDAALILEDAARR---LQAGGAECIVLCTNTMHLVAPRIEAAVSIPFLHIADAAGA 110
Query: 201 ELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALD 260
EA L +G+L + F + +L +G V++PD + +
Sbjct: 111 AAVEAG--------TLTVGLLGTAFTMEQEFLKSRLAAQGLTVLVPDADERQAVHRIIYE 162
Query: 261 ALNRKDV-EGARNLLRIALQVLLVRAVNTVILASDDMQDLLPP---DDPLL 307
L + + +R + + + L R +IL ++ L+ P D PLL
Sbjct: 163 ELCVGVISDASREVYQRVIGSLAARGAQAIILGCTEISLLIKPQHSDLPLL 213
>gi|375083247|ref|ZP_09730274.1| aspartate racemase [Thermococcus litoralis DSM 5473]
gi|374742063|gb|EHR78474.1| aspartate racemase [Thermococcus litoralis DSM 5473]
Length = 225
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 21/164 (12%)
Query: 83 VGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGG 142
+GI+GG S +STL K +++S E+ +P EL+ + +F G
Sbjct: 4 IGIIGGTSPESTLYYYRKYIEISREK--------FEPYFFPELIIYS-INFKDFKDNPNG 54
Query: 143 VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKEL 202
+ +++ + LEKAGA I + + HI EV + + + + VA+E
Sbjct: 55 WEGRKRILINAAKA----LEKAGAEVIGISANTPHIVFPEVKNEINAEMVSIIDAVAEEA 110
Query: 203 KEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
K N+K L L +T FY+ L+ +GFEV++P
Sbjct: 111 KRRNLKRLLL--------LGTKTTMTMPFYKNALEEKGFEVIVP 146
>gi|307700261|ref|ZP_07637301.1| aspartate racemase [Mobiluncus mulieris FB024-16]
gi|307614472|gb|EFN93701.1| aspartate racemase [Mobiluncus mulieris FB024-16]
Length = 237
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 82/165 (49%), Gaps = 17/165 (10%)
Query: 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGG 141
TVG++GG +T+ L +V + ++D + D ++ + + DR++ + L+
Sbjct: 4 TVGVLGGLGPLATVYFLKTVVDFTQAQSDQDNV---DLIITQHSSTPDRTA-ALLD---- 55
Query: 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE 201
G + ++ + R+ L+ AGA +V+PC+ + + V + + +++ VA+
Sbjct: 56 GGESPAPIMAADARK----LQDAGAEFLVIPCNTATNFLQAVVEAVDIEVVNI---VAET 108
Query: 202 LKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLP 246
+ E K AG R+ ++A + + YQE LQ G+E ++P
Sbjct: 109 VAEIGRK--NAGGIKRVAIMATEGTIASEIYQETLQLAGYEALVP 151
>gi|330827247|ref|YP_004390550.1| aspartate racemase [Alicycliphilus denitrificans K601]
gi|329312619|gb|AEB87034.1| aspartate racemase [Alicycliphilus denitrificans K601]
Length = 246
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 68/176 (38%), Gaps = 11/176 (6%)
Query: 151 VENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGC-SVPFLHVSECVAKELKEANMKP 209
+E + + L GAR + MPC+ +H WH + + V LH+ A L+ +
Sbjct: 74 LEAMAQGLAQLAGLGARAVAMPCNTAHAWHAALQERVPQVELLHMPRETAAALRAQGQE- 132
Query: 210 LEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHTLIPALDALNRKDVEG 269
R+ +LA G Y++ +G VLPD + + D + D+
Sbjct: 133 -------RVALLATEGSYRIGLYEQAFAAQGIACVLPDAKARQWLMQGIYDGVKAGDMAL 185
Query: 270 ARNLLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKC--IDPMDALARSTIK 323
A+ Q L + + + + L P P + IDP LAR+ +
Sbjct: 186 AQQRFVAVGQALRAQHGDIALAMACTEIPLALPQAPEAQGWTLIDPTAILARALAR 241
>gi|395005953|ref|ZP_10389808.1| aspartate racemase [Acidovorax sp. CF316]
gi|394316073|gb|EJE52818.1| aspartate racemase [Acidovorax sp. CF316]
Length = 253
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 85/223 (38%), Gaps = 22/223 (9%)
Query: 81 NTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSH----DRSSFSSL 136
TVGI+GG + + VQ GE + D + L+ DR++
Sbjct: 10 QTVGILGGMGPAAGADFARLFVQACGERMAQLGIPVHDQAYPEHWLAQVPIPDRTAAL-- 67
Query: 137 NCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGC-SVPFLH-V 194
G +L E + + L GAR + + C+ +H WH + + + LH V
Sbjct: 68 ----GDTRLGAHQPAEPMLQATGRLAALGARAVAIACNTAHAWHGLLQQRFPQLVVLHGV 123
Query: 195 SECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATMEHT 254
E VA L A +G+LA AG YQ +L+ G LP A E
Sbjct: 124 QEVVAG---------LAARQVRSVGLLATRGAYDAGLYQGELERAGIACCLPGVAGREQL 174
Query: 255 LIPALDALNRKDVEGARNLLRIALQVLLVR-AVNTVILASDDM 296
+ D + D AR R + L R + T+++ ++
Sbjct: 175 MQGIYDGVKAGDYALARERFRAVARALQQRHGITTLVMGCTEI 217
>gi|222086352|ref|YP_002544886.1| aspartate racemase [Agrobacterium radiobacter K84]
gi|221723800|gb|ACM26956.1| aspartate racemase protein [Agrobacterium radiobacter K84]
Length = 239
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEAN-MKPLEAGSPLRIG 219
L+ AGA C+++ + H+ EV SVP +++ + A LK A +KPL
Sbjct: 71 LQAAGAECVLICTNTMHLIAPEVAARISVPLINIIDETAAALKAAGRVKPL--------- 121
Query: 220 VLAKNAILTAGFYQEKLQHEGFEVVLP--DKATMEHTLI 256
+LA + GFY +++ G +++P D T+ H +I
Sbjct: 122 LLATRYTMEHGFYADRMARNGVSIMVPGADDRTLVHDII 160
>gi|402567013|ref|YP_006616358.1| aspartate racemase protein [Burkholderia cepacia GG4]
gi|402248210|gb|AFQ48664.1| aspartate racemase protein [Burkholderia cepacia GG4]
Length = 232
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE AGA C ++ H+ +V +VPF+HV + AK LK A + R +
Sbjct: 71 LETAGADCALICAVTMHLVAPDVEAAVTVPFIHVIDETAKHLKAAGCQ--------RPFL 122
Query: 221 LAKNAILTAGFYQEKLQHEGFEVVLPDK--ATMEHTLI 256
LA + G+Y E+++ +V++PD T+ H +I
Sbjct: 123 LATRYTMEHGYYHERMKQHDIDVMVPDADGRTLVHNII 160
>gi|381406162|ref|ZP_09930845.1| putative aspartate/glutamate racemase [Pantoea sp. Sc1]
gi|380735464|gb|EIB96528.1| putative aspartate/glutamate racemase [Pantoea sp. Sc1]
Length = 230
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 50/90 (55%), Gaps = 11/90 (12%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE+AGA+ IV+ + H ++ ++P LH+++ + +++A ++ ++G+
Sbjct: 71 LERAGAQFIVLCTNTMHKVAAQISAATTIPLLHIADATGRRIRQAGLR--------KVGL 122
Query: 221 LAKNAILTAGFYQEKLQHEGFE--VVLPDK 248
LA + FY+ +LQ E F+ V+ PD+
Sbjct: 123 LATRFTMEQAFYRGRLQ-EQFDLTVITPDE 151
>gi|171318536|ref|ZP_02907687.1| aspartate racemase [Burkholderia ambifaria MEX-5]
gi|171096278|gb|EDT41185.1| aspartate racemase [Burkholderia ambifaria MEX-5]
Length = 230
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 11/166 (6%)
Query: 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGV 220
LE AGA +V+ + H H + ++PFLH+++ L+ A ++ + +
Sbjct: 71 LEAAGADLVVLTTNTMHRVHGAIEAAVALPFLHIADPTGAALRAAGVE--------HVAL 122
Query: 221 LAKNAILTAGFYQEKLQHE-GFEVVLPDKATMEHTLIPALDALNRKDVEGARNLLRIA-L 278
L + FY ++L + G +V++PD+A D L ++ A +A +
Sbjct: 123 LGTRYTMELPFYAQRLGDKFGLDVLVPDEAARSDVHRIIYDELCHGVIDAASRATYVAII 182
Query: 279 QVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTIKW 324
L R VIL ++ L+ DD L D A++ ++W
Sbjct: 183 DELAKRGAQAVILGCTEITLLIGADDSPL-PVFDTTALHAKAAVEW 227
>gi|126699645|ref|YP_001088542.1| aspartate racemase RacX [Clostridium difficile 630]
gi|115251082|emb|CAJ68913.1| putative aspartate racemase RacX [Clostridium difficile 630]
Length = 232
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 84/181 (46%), Gaps = 22/181 (12%)
Query: 150 IVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKP 209
I++ L++ LE G I MPC+ +HI+ E+ + ++P L++ E K+L + K
Sbjct: 67 IIDGLQK----LESTGVNFIAMPCNSAHIYFKELKESINIPILNIVEETVKKLPTISQK- 121
Query: 210 LEAGSPLRIGVLAKNAILTAGFYQEKLQHEGFEVVLPDKATME-HTLIPALDALNRKDVE 268
+ + + ++ + YQ + H G E + D+ ++ + LI + + D E
Sbjct: 122 --------VTLFSTSSTFESTIYQNGIIHNGHEFIFKDEWQIKLNNLIQNI----KMDKE 169
Query: 269 GARN--LLRIALQVLLVRAVNTVILASDDMQDLLPPDDPLLKKCIDPMDALARSTI-KWV 325
N + ++ + ++ +++A D+ +L P + +D LA S + K++
Sbjct: 170 NPHNIDIWNKLIEDVKNESIENIVIACTDLNVVLEKSYPSI-NIVDSSKCLAESVVNKYL 228
Query: 326 K 326
K
Sbjct: 229 K 229
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.134 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,935,972,626
Number of Sequences: 23463169
Number of extensions: 193835365
Number of successful extensions: 478262
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 1239
Number of HSP's that attempted gapping in prelim test: 475951
Number of HSP's gapped (non-prelim): 1998
length of query: 332
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 189
effective length of database: 9,003,962,200
effective search space: 1701748855800
effective search space used: 1701748855800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)