BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020008
(332 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O65251|FEN1_ARATH Flap endonuclease 1 OS=Arabidopsis thaliana GN=FEN1 PE=2 SV=2
Length = 383
Score = 602 bits (1552), Expect = e-171, Method: Compositional matrix adjust.
Identities = 286/333 (85%), Positives = 311/333 (93%), Gaps = 3/333 (0%)
Query: 1 MLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDL 60
MLTNEAGEVTSHLQGMF RTIRLLEAG+KP+YVFDG+PP+LK+QELAKRYSKRADAT DL
Sbjct: 53 MLTNEAGEVTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADL 112
Query: 61 AEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQ 120
A+EAGNKEDIEK+SKRTVKVTKQHNDDCKRLL+LMGVPVVEA SEAEAQCAALCKSG+
Sbjct: 113 TGAIEAGNKEDIEKYSKRTVKVTKQHNDDCKRLLRLMGVPVVEATSEAEAQCAALCKSGK 172
Query: 121 VYAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSG 180
VY VASEDMDSLTFGAP+FLRHLMDPSSRKIPVMEFEVAKILEEL LTMDQFIDLCILSG
Sbjct: 173 VYGVASEDMDSLTFGAPKFLRHLMDPSSRKIPVMEFEVAKILEELQLTMDQFIDLCILSG 232
Query: 181 CDYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTD 240
CDYCDSIRGIGGQTALKLIRQHGSIETILEN+N+ERYQIPE+WPY EAR+LFKEP+V+TD
Sbjct: 233 CDYCDSIRGIGGQTALKLIRQHGSIETILENLNKERYQIPEEWPYNEARKLFKEPDVITD 292
Query: 241 EEQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANT 300
EEQL IKW++PDEEG++ FLV+ENGFN DRVTKAIEKIK AKNKSSQGRLESFFKPVAN+
Sbjct: 293 EEQLDIKWTSPDEEGIVQFLVNENGFNIDRVTKAIEKIKTAKNKSSQGRLESFFKPVANS 352
Query: 301 SAPIKRKE-PENTPKATTNKKSKAGGGGGRKRK 332
S P KRKE PE+T K NKK+K G GGRK+K
Sbjct: 353 SVPAKRKEIPESTTKGAANKKTK--GAGGRKKK 383
>sp|C6TEX6|FEN1_SOYBN Flap endonuclease 1 OS=Glycine max GN=FEN1 PE=2 SV=1
Length = 382
Score = 580 bits (1494), Expect = e-165, Method: Compositional matrix adjust.
Identities = 274/317 (86%), Positives = 297/317 (93%), Gaps = 1/317 (0%)
Query: 1 MLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDL 60
MLTNEAGEVTSHLQGMF+RTIRLLEAG+KP+YVFDG+PPDLKKQELAKRYSKRA+AT+DL
Sbjct: 53 MLTNEAGEVTSHLQGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRAEATEDL 112
Query: 61 AEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQ 120
+EA+E NKEDIEKFSKRTVKVTKQHNDDCKRLL+LMGVPVVEAPSEAEAQCAALCK+G+
Sbjct: 113 SEALETANKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVVEAPSEAEAQCAALCKAGK 172
Query: 121 VYAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSG 180
VY V SEDMDSLTFGAP+FLRHLMDPSS+KIPVMEFEVAKILEELN+TMDQFIDLCILSG
Sbjct: 173 VYGVVSEDMDSLTFGAPKFLRHLMDPSSKKIPVMEFEVAKILEELNMTMDQFIDLCILSG 232
Query: 181 CDYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTD 240
CDYCDSIRGIGG TALKLIRQHGSIE I EN+N+ERYQIP++WPYQEARRLFKEP V+TD
Sbjct: 233 CDYCDSIRGIGGLTALKLIRQHGSIENIPENLNKERYQIPDNWPYQEARRLFKEPLVITD 292
Query: 241 EEQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANT 300
E++L IKWS+PDEEGLI FLV+ENGFN DRVTKAIEKIK AKNKSSQGRLESFFKP AN
Sbjct: 293 EKELDIKWSSPDEEGLITFLVNENGFNRDRVTKAIEKIKVAKNKSSQGRLESFFKPTANP 352
Query: 301 SAPIKRKE-PENTPKAT 316
S PIKRKE P N K T
Sbjct: 353 SVPIKRKETPVNNAKET 369
>sp|Q9SXQ6|FEN11_ORYSJ Flap endonuclease 1-A OS=Oryza sativa subsp. japonica GN=FEN-1a
PE=2 SV=1
Length = 380
Score = 550 bits (1417), Expect = e-156, Method: Compositional matrix adjust.
Identities = 264/318 (83%), Positives = 287/318 (90%), Gaps = 3/318 (0%)
Query: 2 LTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLA 61
LTNEAGEVTSHLQGMF RTIRLLEAG+KP+YVFDG+PPDLKKQELAKRYSKR DAT +L
Sbjct: 54 LTNEAGEVTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKREDATKELT 113
Query: 62 EAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQV 121
EAVE G+K+ IEKFSKRTVKVTKQHN++CKRLL+LMGVPVVEAP EAEA+CAALC + V
Sbjct: 114 EAVEEGDKDAIEKFSKRTVKVTKQHNEECKRLLRLMGVPVVEAPCEAEAECAALCINDMV 173
Query: 122 YAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSGC 181
YAVASEDMDSLTFGAPRFLRHLMDPSS+KIPVMEFEVAK+LEEL LTMDQFIDLCILSGC
Sbjct: 174 YAVASEDMDSLTFGAPRFLRHLMDPSSKKIPVMEFEVAKVLEELELTMDQFIDLCILSGC 233
Query: 182 DYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTDE 241
DYCDSI+GIGGQTALKLIRQHGSIE+ILENIN++RYQIPEDWPYQEARRLFKEP V D
Sbjct: 234 DYCDSIKGIGGQTALKLIRQHGSIESILENINKDRYQIPEDWPYQEARRLFKEPNVTLDI 293
Query: 242 EQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANTS 301
+L KW+APDEEGL+ FLV ENGFN DRVTKAIEKIK AKNKSSQGRLESFFKPV +TS
Sbjct: 294 PEL--KWNAPDEEGLVEFLVKENGFNQDRVTKAIEKIKFAKNKSSQGRLESFFKPVVSTS 351
Query: 302 APIKRKEPENTP-KATTN 318
P+KRK+ P KA N
Sbjct: 352 VPLKRKDTSEKPTKAVAN 369
>sp|B8AW67|FEN11_ORYSI Flap endonuclease 1-A OS=Oryza sativa subsp. indica GN=FEN1a PE=3
SV=1
Length = 380
Score = 550 bits (1417), Expect = e-156, Method: Compositional matrix adjust.
Identities = 264/318 (83%), Positives = 287/318 (90%), Gaps = 3/318 (0%)
Query: 2 LTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLA 61
LTNEAGEVTSHLQGMF RTIRLLEAG+KP+YVFDG+PPDLKKQELAKRYSKR DAT +L
Sbjct: 54 LTNEAGEVTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKREDATKELT 113
Query: 62 EAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQV 121
EAVE G+K+ IEKFSKRTVKVTKQHN++CKRLL+LMGVPVVEAP EAEA+CAALC + V
Sbjct: 114 EAVEEGDKDAIEKFSKRTVKVTKQHNEECKRLLRLMGVPVVEAPCEAEAECAALCINDMV 173
Query: 122 YAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSGC 181
YAVASEDMDSLTFGAPRFLRHLMDPSS+KIPVMEFEVAK+LEEL LTMDQFIDLCILSGC
Sbjct: 174 YAVASEDMDSLTFGAPRFLRHLMDPSSKKIPVMEFEVAKVLEELELTMDQFIDLCILSGC 233
Query: 182 DYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTDE 241
DYCDSI+GIGGQTALKLIRQHGSIE+ILENIN++RYQIPEDWPYQEARRLFKEP V D
Sbjct: 234 DYCDSIKGIGGQTALKLIRQHGSIESILENINKDRYQIPEDWPYQEARRLFKEPNVTLDI 293
Query: 242 EQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANTS 301
+L KW+APDEEGL+ FLV ENGFN DRVTKAIEKIK AKNKSSQGRLESFFKPV +TS
Sbjct: 294 PEL--KWNAPDEEGLVQFLVKENGFNQDRVTKAIEKIKFAKNKSSQGRLESFFKPVVSTS 351
Query: 302 APIKRKEPENTP-KATTN 318
P+KRK+ P KA N
Sbjct: 352 VPLKRKDTSEKPTKAVAN 369
>sp|C5YUK3|FEN11_SORBI Flap endonuclease 1-A OS=Sorghum bicolor GN=FEN1-A PE=3 SV=1
Length = 380
Score = 549 bits (1415), Expect = e-156, Method: Compositional matrix adjust.
Identities = 258/307 (84%), Positives = 287/307 (93%), Gaps = 2/307 (0%)
Query: 2 LTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLA 61
LTNEAGEVTSHLQGMF RTIRLLEAG+KP+YVFDG+PPD+KK+ELAKR+SKR DAT+DL
Sbjct: 54 LTNEAGEVTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDMKKEELAKRFSKREDATNDLK 113
Query: 62 EAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQV 121
EAVEAG+K+ +EK SKRTVKVT QHNDDCKRLL+LMGVPVVEAPSEAEA+CAALCK+ +V
Sbjct: 114 EAVEAGDKDAVEKLSKRTVKVTAQHNDDCKRLLRLMGVPVVEAPSEAEAECAALCKNDKV 173
Query: 122 YAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSGC 181
+AVASEDMDSLTFGAPRFLRHLMDPSS+KIPVMEF+VAK+LEEL LTMDQFIDLCIL GC
Sbjct: 174 FAVASEDMDSLTFGAPRFLRHLMDPSSKKIPVMEFDVAKVLEELELTMDQFIDLCILCGC 233
Query: 182 DYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTDE 241
DYCDSI+GIGGQTALKLIRQHGSIE+ILEN+N++RYQIPEDWPYQEARRLFKEP V D
Sbjct: 234 DYCDSIKGIGGQTALKLIRQHGSIESILENLNKDRYQIPEDWPYQEARRLFKEPNVTLDV 293
Query: 242 EQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANTS 301
+L KW+ PDEEGLI+FLV +NGFN DRVTKAIEKIK+AKNKSSQGRLESFFKPVA TS
Sbjct: 294 PEL--KWTPPDEEGLISFLVKDNGFNEDRVTKAIEKIKSAKNKSSQGRLESFFKPVATTS 351
Query: 302 APIKRKE 308
AP+KRKE
Sbjct: 352 APLKRKE 358
>sp|B4FHY0|FEN1_MAIZE Flap endonuclease 1 OS=Zea mays GN=FEN1 PE=2 SV=1
Length = 379
Score = 548 bits (1412), Expect = e-155, Method: Compositional matrix adjust.
Identities = 258/307 (84%), Positives = 285/307 (92%), Gaps = 2/307 (0%)
Query: 2 LTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLA 61
LTNEAGEVTSHLQGMF RTIRLLEAG+KP+YVFDG+PPD+KKQELAKRYSKR DAT DL
Sbjct: 54 LTNEAGEVTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDMKKQELAKRYSKRDDATKDLT 113
Query: 62 EAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQV 121
EAVE G+K+ IEK SKRTVKVT+QHN+DCKRLL+LMGVPVVEAPSEAEA+CAALC + +V
Sbjct: 114 EAVEVGDKDAIEKLSKRTVKVTRQHNEDCKRLLRLMGVPVVEAPSEAEAECAALCINDKV 173
Query: 122 YAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSGC 181
+AVASEDMDSLTFGAPRFLRHLMDPSS+KIPVMEF+VAK+LEEL LTMDQFIDLCIL GC
Sbjct: 174 FAVASEDMDSLTFGAPRFLRHLMDPSSKKIPVMEFDVAKVLEELELTMDQFIDLCILCGC 233
Query: 182 DYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTDE 241
DYCDSI+GIGGQTALKLIRQHGSIE+ILEN+N++RYQIPEDWPYQEARRLFKEP V D
Sbjct: 234 DYCDSIKGIGGQTALKLIRQHGSIESILENLNKDRYQIPEDWPYQEARRLFKEPNVTLDI 293
Query: 242 EQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANTS 301
+L KW+APDEEGLI+FLV +NGFN DRVTKAIEKIK+AKNKSSQGRLESFFKP A TS
Sbjct: 294 PEL--KWTAPDEEGLISFLVKDNGFNEDRVTKAIEKIKSAKNKSSQGRLESFFKPTATTS 351
Query: 302 APIKRKE 308
AP+KRKE
Sbjct: 352 APLKRKE 358
>sp|A9S0B8|FEN11_PHYPA Flap endonuclease 1-A OS=Physcomitrella patens subsp. patens
GN=FEN1-A PE=3 SV=1
Length = 394
Score = 479 bits (1234), Expect = e-134, Method: Compositional matrix adjust.
Identities = 215/294 (73%), Positives = 263/294 (89%)
Query: 1 MLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDL 60
+LTN+AGEVTSHLQGMF RTIR+LEAG+KP+YVFDGQPPDLKK+ELAKR+++R DA +DL
Sbjct: 53 LLTNDAGEVTSHLQGMFNRTIRVLEAGLKPVYVFDGQPPDLKKRELAKRFARREDAAEDL 112
Query: 61 AEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQ 120
A E GN+ D+EK+SK+TVKVTKQHN+DC++LL+LMGVPVVEAPSEAEA+CA+LCK+ +
Sbjct: 113 VTAKETGNEADVEKYSKKTVKVTKQHNEDCRKLLRLMGVPVVEAPSEAEAECASLCKAEK 172
Query: 121 VYAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSG 180
V+AVASEDMDSLT+G+ RFLRHLM+P+SRK+PV+EF++AK+LE L L MDQF+DLCIL G
Sbjct: 173 VFAVASEDMDSLTYGSTRFLRHLMEPTSRKLPVLEFDIAKVLEGLGLNMDQFVDLCILCG 232
Query: 181 CDYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTD 240
CDYCD+IRGIG QTALK+IRQHGS+E +LEN+N++RYQ+P+ WPYQEARRLFKEP V
Sbjct: 233 CDYCDTIRGIGPQTALKMIRQHGSLEIVLENLNKDRYQVPDPWPYQEARRLFKEPLVTPP 292
Query: 241 EEQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFF 294
E+ + KW+APD EGL LV ENGFN+DRV KAIEK+K AKNK+SQGRLESFF
Sbjct: 293 EKVPEFKWTAPDTEGLRQLLVEENGFNNDRVMKAIEKLKVAKNKASQGRLESFF 346
>sp|A9U328|FEN12_PHYPA Flap endonuclease 1-B OS=Physcomitrella patens subsp. patens
GN=FEN1-B PE=3 SV=1
Length = 349
Score = 457 bits (1176), Expect = e-128, Method: Compositional matrix adjust.
Identities = 211/290 (72%), Positives = 252/290 (86%)
Query: 1 MLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDL 60
MLTN+AGEVTSHL GMF RTIR+LEAG+KP+YVFDG+PP++K ELAKR ++R +A + L
Sbjct: 53 MLTNDAGEVTSHLIGMFNRTIRVLEAGLKPVYVFDGKPPEMKGGELAKRLARREEAVESL 112
Query: 61 AEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQ 120
A A GN+ D+EK+SKRTVKVTKQHN+DC++LL+LMGVPVVEAPSEAEA+CA+LCK+G+
Sbjct: 113 ATAKLEGNEADMEKYSKRTVKVTKQHNEDCRKLLRLMGVPVVEAPSEAEAECASLCKTGK 172
Query: 121 VYAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSG 180
VYAVASEDMDSLTFG+ RFLRHLM+P SRK+PVMEF++ K+LE L+LTMDQF+DLCIL G
Sbjct: 173 VYAVASEDMDSLTFGSTRFLRHLMEPVSRKLPVMEFDMNKVLEGLSLTMDQFVDLCILCG 232
Query: 181 CDYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTD 240
CDY D+IRGIG QTALKLIRQHGS+E ILEN+N++RYQIP+ WPY+EARRLFKEP V
Sbjct: 233 CDYIDTIRGIGAQTALKLIRQHGSLEKILENLNKDRYQIPDPWPYEEARRLFKEPLVTQA 292
Query: 241 EEQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRL 290
E+ KW+APD EGLI FLV ENGFN DRV AI+KI+ AKNKSSQGR
Sbjct: 293 EDVPDFKWTAPDAEGLIKFLVEENGFNHDRVQTAIKKIQLAKNKSSQGRF 342
>sp|Q75LI2|FEN12_ORYSJ Flap endonuclease 1-B OS=Oryza sativa subsp. japonica GN=FEN-1b
PE=2 SV=1
Length = 412
Score = 439 bits (1128), Expect = e-122, Method: Compositional matrix adjust.
Identities = 210/312 (67%), Positives = 254/312 (81%), Gaps = 5/312 (1%)
Query: 1 MLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDL 60
+LTNEAGEVTSHLQGM RT+R+LEAG+KP++VFDG+PPD+KK+ELAKR KR +++DL
Sbjct: 53 VLTNEAGEVTSHLQGMLNRTVRILEAGIKPVFVFDGEPPDMKKKELAKRSLKRDGSSEDL 112
Query: 61 AEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQ 120
A+E G+++ IEKFSKRTVKVTK+HN+DCKRLL LMGVPVV+AP EAEAQCAALC++ +
Sbjct: 113 NRAIEVGDEDLIEKFSKRTVKVTKKHNEDCKRLLSLMGVPVVQAPGEAEAQCAALCENHK 172
Query: 121 VYAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSG 180
V+A+ASEDMDSLTFGA RFLRHL D S ++ PV EFEV+K+LEEL LTMDQFIDLCILSG
Sbjct: 173 VFAIASEDMDSLTFGARRFLRHLTDLSFKRSPVTEFEVSKVLEELGLTMDQFIDLCILSG 232
Query: 181 CDYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTD 240
CDYC++IRGIGGQ ALKLIRQHG IE +++N+++ RY +PEDWPYQE R LFKEP V TD
Sbjct: 233 CDYCENIRGIGGQRALKLIRQHGYIEEVVQNLSQTRYSVPEDWPYQEVRALFKEPNVCTD 292
Query: 241 EEQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANT 300
W+ PDEEGLINFL +EN F+ DRV K++EKIKAA +K S GR PVAN
Sbjct: 293 IPDFL--WTPPDEEGLINFLAAENNFSPDRVVKSVEKIKAANDKFSLGR-GKLLAPVANL 349
Query: 301 --SAPIKRKEPE 310
S KEP+
Sbjct: 350 TGSTSTAGKEPK 361
>sp|B8AMS4|FEN12_ORYSI Flap endonuclease 1-B OS=Oryza sativa subsp. indica GN=FEN1b PE=3
SV=1
Length = 412
Score = 439 bits (1128), Expect = e-122, Method: Compositional matrix adjust.
Identities = 210/312 (67%), Positives = 254/312 (81%), Gaps = 5/312 (1%)
Query: 1 MLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDL 60
+LTNEAGEVTSHLQGM RT+R+LEAG+KP++VFDG+PPD+KK+ELAKR KR +++DL
Sbjct: 53 VLTNEAGEVTSHLQGMLNRTVRILEAGIKPVFVFDGEPPDMKKKELAKRSLKRDGSSEDL 112
Query: 61 AEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQ 120
A+E G+++ IEKFSKRTVKVTK+HN+DCKRLL LMGVPVV+AP EAEAQCAALC++ +
Sbjct: 113 NRAIEVGDEDLIEKFSKRTVKVTKKHNEDCKRLLSLMGVPVVQAPGEAEAQCAALCENHK 172
Query: 121 VYAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSG 180
V+A+ASEDMDSLTFGA RFLRHL D S ++ PV EFEV+K+LEEL LTMDQFIDLCILSG
Sbjct: 173 VFAIASEDMDSLTFGARRFLRHLTDLSFKRSPVTEFEVSKVLEELGLTMDQFIDLCILSG 232
Query: 181 CDYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTD 240
CDYC++IRGIGGQ ALKLIRQHG IE +++N+++ RY +PEDWPYQE R LFKEP V TD
Sbjct: 233 CDYCENIRGIGGQRALKLIRQHGYIEEVVQNLSQTRYSVPEDWPYQEVRALFKEPNVCTD 292
Query: 241 EEQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANT 300
W+ PDEEGLINFL +EN F+ DRV K++EKIKAA +K S GR PVAN
Sbjct: 293 IPDFL--WTPPDEEGLINFLAAENNFSPDRVVKSVEKIKAANDKFSLGR-GKLLAPVANL 349
Query: 301 --SAPIKRKEPE 310
S KEP+
Sbjct: 350 TGSTSTAGKEPK 361
>sp|C5WU23|FEN12_SORBI Flap endonuclease 1-B OS=Sorghum bicolor GN=FEN1-B PE=3 SV=2
Length = 428
Score = 429 bits (1103), Expect = e-119, Method: Compositional matrix adjust.
Identities = 204/312 (65%), Positives = 251/312 (80%), Gaps = 9/312 (2%)
Query: 2 LTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLA 61
LT E+ SHLQGM RT+R+LEAG+KP++VFDG+PP++KK+ELAKR KR DAT DL
Sbjct: 81 LTFHLCELCSHLQGMLNRTVRMLEAGIKPVFVFDGEPPEMKKKELAKRSLKRDDATKDLN 140
Query: 62 EAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQV 121
A+E G+++ +EKFSKRTVKVT++HNDDCKRLL+LMGVPVVEAP EAEAQCAALC++ QV
Sbjct: 141 RAIEIGDEDAVEKFSKRTVKVTRKHNDDCKRLLRLMGVPVVEAPGEAEAQCAALCENHQV 200
Query: 122 YAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSGC 181
YAVASEDMDSLTFGA RFLRHL D +K PV EF+V+K+LEEL LTMDQFIDLCILSGC
Sbjct: 201 YAVASEDMDSLTFGARRFLRHLTDLGYKKSPVTEFDVSKVLEELGLTMDQFIDLCILSGC 260
Query: 182 DYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEV---V 238
DYC++I+GIGGQ ALKLIRQHG IE +L+N+N+ R+ +PEDWPYQE R LFKEP V +
Sbjct: 261 DYCENIKGIGGQRALKLIRQHGCIEEVLQNLNQTRFSVPEDWPYQEVRTLFKEPNVSAGI 320
Query: 239 TDEEQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVA 298
+D W++PD EGL+ FL +EN F+ DRVTKA+EKIKAA+++ S GRL+ PVA
Sbjct: 321 SD-----FTWTSPDTEGLMGFLSTENSFSPDRVTKAVEKIKAARDRYSPGRLKH-LTPVA 374
Query: 299 NTSAPIKRKEPE 310
+ KEP+
Sbjct: 375 SLPGTHTGKEPK 386
>sp|A8J2Z9|FEN1_CHLRE Flap endonuclease 1 OS=Chlamydomonas reinhardtii GN=FEN1 PE=3 SV=1
Length = 396
Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust.
Identities = 185/311 (59%), Positives = 242/311 (77%)
Query: 1 MLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDL 60
+LTNEAGE+TSHLQGMF RT ++LEAG+KP+YVFDG+PP LK+ +LA+R +RADA + L
Sbjct: 53 LLTNEAGEITSHLQGMFFRTAKMLEAGIKPVYVFDGKPPQLKQDQLAQRTERRADANEAL 112
Query: 61 AEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQ 120
+A EAG++E IEK+SKR+V+VT++HND+CKRLL+LMGVPVVEAP+EAEAQCA + KSG
Sbjct: 113 EKAKEAGDQEAIEKYSKRSVRVTREHNDECKRLLRLMGVPVVEAPTEAEAQCAEMAKSGL 172
Query: 121 VYAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSG 180
VY +A+EDMD+LTFGAPR +RHLM PSS+ +PV EF+ L EL LT DQFIDLCIL G
Sbjct: 173 VYGLATEDMDALTFGAPRVIRHLMAPSSQNVPVQEFDREVALRELELTDDQFIDLCILMG 232
Query: 181 CDYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTD 240
CDYC +IRGIG AL++I++HGSIE +L+ ++ +Y +PE +P++E+ FK PEV
Sbjct: 233 CDYCGTIRGIGAVRALQMIKKHGSIEGMLKELDPAKYPVPEPFPHKESHEFFKNPEVTPS 292
Query: 241 EEQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANT 300
E +KW+APDEEGL+ FLV+E FN RV A+ +IKA K K++QGRLESFF +
Sbjct: 293 AEIPPLKWTAPDEEGLVQFLVNEKQFNEQRVRNAVGRIKANKTKANQGRLESFFTSLPKP 352
Query: 301 SAPIKRKEPEN 311
+ K K E+
Sbjct: 353 ATADKAKPKED 363
>sp|C1BM18|FEN1_OSMMO Flap endonuclease 1 OS=Osmerus mordax GN=fen1 PE=2 SV=1
Length = 380
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/332 (56%), Positives = 245/332 (73%), Gaps = 5/332 (1%)
Query: 1 MLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDL 60
+L NE GE TSHL GMF RTIR+LE G+KP+YVFDG+PP LK EL KR +RA+A L
Sbjct: 52 VLQNEDGETTSHLMGMFYRTIRMLENGIKPVYVFDGKPPQLKSGELEKRGERRAEAEKLL 111
Query: 61 AEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQ 120
A+A EAG +E+I+KFSKR VKVT+QHND+CK+LL LMGVP VEAP EAEA CAAL K+G+
Sbjct: 112 AQAQEAGEQENIDKFSKRLVKVTRQHNDECKKLLTLMGVPYVEAPCEAEASCAALVKAGK 171
Query: 121 VYAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSG 180
V+A A+EDMD LTFG LRHL ++K+P+ EF ++IL+++ L+ +QFIDLCIL G
Sbjct: 172 VFATATEDMDGLTFGTGVLLRHLTASEAKKLPIQEFHFSRILQDIGLSHEQFIDLCILLG 231
Query: 181 CDYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTD 240
CDYC +I+GIG + A+ LIRQHGSIE IL+NI+ ++ +PEDW Y+EAR LF P+VV D
Sbjct: 232 CDYCGTIKGIGPKRAMDLIRQHGSIEEILDNIDLSKHPVPEDWLYKEARGLFLTPDVV-D 290
Query: 241 EEQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANT 300
L++KWS PDEEGL+ F+ +E F+ DR+ +KI ++ S+QGRL+SFF +
Sbjct: 291 CSCLELKWSEPDEEGLVQFMCAEKQFSEDRMRNGCKKILKSRQGSTQGRLDSFFSVTGSL 350
Query: 301 SAPIKRKEPENTPKATTNKKSKAGGGGGRKRK 332
S+ KRKEPE K +T KK K G G+ +K
Sbjct: 351 SS--KRKEPEM--KGSTKKKLKTGATAGKFKK 378
>sp|Q7Q323|FEN1_ANOGA Flap endonuclease 1 OS=Anopheles gambiae GN=Fen1 PE=3 SV=2
Length = 383
Score = 384 bits (986), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/331 (56%), Positives = 240/331 (72%), Gaps = 2/331 (0%)
Query: 2 LTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLA 61
LT+ GE TSHL G F RTIRLLE G+KP+YVFDG+PPDLK EL KR +R +A L
Sbjct: 53 LTSVDGETTSHLMGTFYRTIRLLENGIKPVYVFDGKPPDLKSGELNKRAERREEAQKALD 112
Query: 62 EAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQV 121
+A EAG EDIEKF++R VKVTK H ++ K LL+LMGVP VEAP EAEAQCAAL ++G+V
Sbjct: 113 KATEAGATEDIEKFNRRLVKVTKHHANEAKELLRLMGVPYVEAPCEAEAQCAALVRAGKV 172
Query: 122 YAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSGC 181
YA A+EDMD+LTFG+ LRHL +RK+PV EF K+L+ LT D+FIDLCIL GC
Sbjct: 173 YATATEDMDALTFGSNILLRHLTFSEARKMPVQEFAYEKVLKGFELTQDEFIDLCILLGC 232
Query: 182 DYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTDE 241
DYCD+IRGIG + A++LI +H SIE ILE+++R++Y +PE W Y++AR+LFKEPE V D
Sbjct: 233 DYCDTIRGIGPKKAIELINKHRSIEKILEHLDRQKYIVPEGWNYEQARKLFKEPE-VQDA 291
Query: 242 EQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANTS 301
+ +++KWS PDEEGL+ FL + FN DR+ +KI KN ++QGRL+SFFK + +T
Sbjct: 292 DTIELKWSEPDEEGLVKFLCGDRQFNEDRIRSGAKKILKTKNTATQGRLDSFFKVLPSTG 351
Query: 302 APIKRKEPENTPKATTNKKSKAGGGGGRKRK 332
P KRK E P A ++ K GG R RK
Sbjct: 352 TP-KRKVDEKKPLAGSSAKKAKTGGATRGRK 381
>sp|Q6TNU4|FEN1A_DANRE Flap endonuclease 1 OS=Danio rerio GN=fen1 PE=2 SV=1
Length = 380
Score = 384 bits (986), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/332 (56%), Positives = 242/332 (72%), Gaps = 3/332 (0%)
Query: 1 MLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDL 60
+L NE GE TSHL GMF RTIR+LE+G+KP+YVFDG+PP LK EL KR +RA+A L
Sbjct: 52 VLQNEDGETTSHLMGMFYRTIRMLESGIKPVYVFDGKPPQLKSGELEKRVERRAEAEKLL 111
Query: 61 AEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQ 120
A+A EAG +E+I+KFSKR VKVTKQHN++CK+LL LMGVP +EAP EAEA CAAL K+G+
Sbjct: 112 AQAQEAGEQENIDKFSKRLVKVTKQHNEECKKLLSLMGVPYIEAPCEAEASCAALVKAGK 171
Query: 121 VYAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSG 180
VYA A+EDMD LTFG LRHL ++K+P+ EF ++IL+++ LT QFIDLCIL G
Sbjct: 172 VYATATEDMDGLTFGTTVLLRHLTASEAKKLPIQEFHFSRILQDMELTHQQFIDLCILLG 231
Query: 181 CDYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTD 240
CDYC +I+GIG + A+ LI+QHGSIE ILENI+ ++ PEDW Y+EAR LF EPEVV D
Sbjct: 232 CDYCGTIKGIGPKRAIDLIKQHGSIEEILENIDPNKHPAPEDWLYKEARGLFLEPEVV-D 290
Query: 241 EEQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANT 300
+ +KW+ PDE+GLI F+ +E F+ DR+ +KI ++ S+QGRL++FF +
Sbjct: 291 GTSVDLKWNEPDEDGLIQFMCAEKQFSEDRIRNGCKKITKSRQGSTQGRLDTFFTVTGSI 350
Query: 301 SAPIKRKEPENTPKATTNKKSKAGGGGGRKRK 332
S+ KRKEPE A +K+ A G +K K
Sbjct: 351 SS--KRKEPETKGSAKKKQKTSATPGKFKKGK 380
>sp|C3ZBT0|FEN1_BRAFL Flap endonuclease 1 OS=Branchiostoma floridae GN=FEN1 PE=3 SV=1
Length = 380
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/332 (56%), Positives = 251/332 (75%), Gaps = 3/332 (0%)
Query: 1 MLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDL 60
MLTN+AGE TSHL GMF RTIR+++ G+KP+YVFDG+PP++K ELAKR +R +A L
Sbjct: 52 MLTNDAGEATSHLMGMFYRTIRMVDNGIKPVYVFDGKPPNMKSGELAKRAERREEAQKAL 111
Query: 61 AEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQ 120
+A EAG ED+ KF KR VKVTK+HN +CK+LL LMG+P V+AP EAEAQCA L K G+
Sbjct: 112 EKAEEAGEAEDVNKFQKRLVKVTKEHNAECKKLLTLMGIPYVDAPCEAEAQCAELAKKGK 171
Query: 121 VYAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSG 180
VYA +EDMD LTFG LRHL +RK+P+ E+ ++L EL+LT DQFIDLCIL G
Sbjct: 172 VYAAGTEDMDVLTFGTNIMLRHLTFSEARKMPIKEYYYDRLLAELDLTQDQFIDLCILLG 231
Query: 181 CDYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTD 240
CDYCDSIRGIG + A++LIRQ+ SIE IL++I+ +++ +PEDWPY +AR+LFKEPE VT
Sbjct: 232 CDYCDSIRGIGPKRAIELIRQYKSIEEILKHIDTKKFPVPEDWPYDQARKLFKEPE-VTP 290
Query: 241 EEQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANT 300
+Q+++KW PDEEGL+ ++ +E GF+ DR+ +K+K A++ S+QGRL+SFFK +++
Sbjct: 291 ADQVELKWVDPDEEGLVQYMSNEKGFSEDRIKNGAKKLKNARHTSTQGRLDSFFKVMSSP 350
Query: 301 SAPIKRKEPENTPKATTNKKSKAGGGGGRKRK 332
S +KRKEP K + +KK+K GG +K K
Sbjct: 351 S--VKRKEPPKGAKGSASKKAKMSGGKFKKPK 380
>sp|Q5I4H3|FEN1_XIPMA Flap endonuclease 1 OS=Xiphophorus maculatus GN=fen1 PE=2 SV=1
Length = 380
Score = 382 bits (981), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/332 (56%), Positives = 238/332 (71%), Gaps = 5/332 (1%)
Query: 1 MLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDL 60
+L +E GE TSHL GMF RTIR+LE G+KP+YVFDG+PP LK EL KR +RA+A L
Sbjct: 52 VLQSEDGETTSHLMGMFYRTIRMLENGIKPVYVFDGKPPQLKSAELEKRGERRAEAEKML 111
Query: 61 AEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQ 120
A+A E G +E+I+KFSKR VKVTKQHNDDCK+LL LMGVP +EAP EAEA CAAL K G+
Sbjct: 112 AKAQELGEQENIDKFSKRLVKVTKQHNDDCKKLLTLMGVPYIEAPCEAEASCAALVKEGK 171
Query: 121 VYAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSG 180
V+A A+EDMD LTFG LRHL ++K+PV EF +IL+++ LT +QFIDLCIL G
Sbjct: 172 VFATATEDMDGLTFGTNVLLRHLTASEAKKLPVQEFHFNRILQDIGLTSEQFIDLCILLG 231
Query: 181 CDYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTD 240
CDYC +I+GIG + A+ LIRQHGSIE ILENI+ ++ PEDW Y+EAR LF +PEVV D
Sbjct: 232 CDYCGTIKGIGPKRAIDLIRQHGSIEEILENIDTSKHPAPEDWLYKEARNLFLKPEVV-D 290
Query: 241 EEQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANT 300
+ +KW PDEE LI F+ SE F+ DR+ +K+ ++ S+QGRL+SFF +
Sbjct: 291 SSTVDLKWREPDEEALIQFMCSEKQFSEDRIRNGCKKMMKSRQGSTQGRLDSFFSVTGSL 350
Query: 301 SAPIKRKEPENTPKATTNKKSKAGGGGGRKRK 332
S+ KRKEPE K + KK K G G+ RK
Sbjct: 351 SS--KRKEPET--KGSAKKKQKTGATPGKFRK 378
>sp|B9EMY6|FEN1_SALSA Flap endonuclease 1 OS=Salmo salar GN=fen1 PE=2 SV=1
Length = 380
Score = 382 bits (981), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/332 (55%), Positives = 243/332 (73%), Gaps = 5/332 (1%)
Query: 1 MLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDL 60
+L NE GE TSHL GMF RTIR+LE G+KP+YVFDG+PP LK EL KR +RA+A L
Sbjct: 52 VLQNENGETTSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQLKSGELEKRGERRAEAEKLL 111
Query: 61 AEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQ 120
A+A EAG +E+I+KFSKR VKVT+QHND+CK+LL LMGVP +EAP EAEA CAAL K+G+
Sbjct: 112 AQAQEAGEQENIDKFSKRLVKVTQQHNDECKKLLTLMGVPYIEAPCEAEASCAALVKAGK 171
Query: 121 VYAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSG 180
V+A A+EDMD LTFG LRHL ++K+P+ EF+ ++L+++NLT +QFIDLCIL G
Sbjct: 172 VFATATEDMDGLTFGTGVLLRHLTASEAKKLPIQEFQFTRLLQDINLTHEQFIDLCILLG 231
Query: 181 CDYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTD 240
CDYC +I+GIG + A+ LIRQHGSIE ILENI+ ++ PEDW Y+EAR LF +P+VV D
Sbjct: 232 CDYCGTIKGIGPKRAIDLIRQHGSIEEILENIDSSKHPAPEDWLYKEARGLFLQPDVV-D 290
Query: 241 EEQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANT 300
+ +KWS PDE+ LI F+ +E F+ DR+ +KI ++ S+QGRL++FF +
Sbjct: 291 CSTVDLKWSEPDEDALIQFMCAEKQFSEDRIKNGCKKILKSRQGSTQGRLDTFFTITGSL 350
Query: 301 SAPIKRKEPENTPKATTNKKSKAGGGGGRKRK 332
S+ KRKEPE K + KK K G G+ +K
Sbjct: 351 SS--KRKEPET--KGSNKKKQKTGATPGKFKK 378
>sp|C1E3X9|FEN1_MICSR Flap endonuclease 1 OS=Micromonas sp. (strain RCC299 / NOUM17)
GN=FEN1 PE=3 SV=1
Length = 384
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/310 (57%), Positives = 237/310 (76%), Gaps = 2/310 (0%)
Query: 2 LTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLA 61
LTNEAGEVTSHLQGMFTRT+R+L+AG+KP+YVFDG+PP +K ELAKR KR A L
Sbjct: 54 LTNEAGEVTSHLQGMFTRTLRMLKAGIKPVYVFDGKPPTMKGGELAKRKDKREAAESALE 113
Query: 62 EAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQV 121
+A EAG++E+IEK SKRTV+V+K H+++ +L + +G+PV EAP EAEA CAALCK+G V
Sbjct: 114 KAKEAGDQEEIEKLSKRTVRVSKVHSEEVMKLARFLGLPVFEAPCEAEATCAALCKAGLV 173
Query: 122 YAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSGC 181
YA ASEDMD+L F P+ R+LM PSS++ P++EF+ K+L L LT DQFID+CIL GC
Sbjct: 174 YAAASEDMDTLCFSTPKLARNLMAPSSQEKPILEFDFDKLLAGLELTWDQFIDVCILCGC 233
Query: 182 DYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTDE 241
DYCDSI+GIG ALK I+Q+G+IE +LE++++E+Y +P+DWPY+EAR LFK PEVV
Sbjct: 234 DYCDSIKGIGPVNALKYIKQYGNIEGLLEHLDKEKYPVPDDWPYKEARVLFKNPEVV-QT 292
Query: 242 EQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANTS 301
+ L +KW+APDEE ++ FL E FN DR+ K + +K A+++ Q RLE+FF S
Sbjct: 293 DGLTLKWTAPDEEAVVAFLCGEKSFNEDRIRKQLADLKKARSQGGQNRLETFFGAATVKS 352
Query: 302 API-KRKEPE 310
+ + KRKEPE
Sbjct: 353 STVGKRKEPE 362
>sp|Q178M1|FEN1_AEDAE Flap endonuclease 1 OS=Aedes aegypti GN=Fen1 PE=3 SV=1
Length = 380
Score = 380 bits (975), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/331 (57%), Positives = 240/331 (72%), Gaps = 3/331 (0%)
Query: 2 LTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLA 61
LT+ GE TSHL G F RTIRLLE G+KP+YVFDG+PPDLK EL KR KR +A L
Sbjct: 53 LTSVDGETTSHLMGTFYRTIRLLENGIKPVYVFDGKPPDLKSGELTKRAEKREEAQKALD 112
Query: 62 EAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQV 121
+A EAG EDI+KF++R VKVTKQH+++ K LLKLMGVP V+AP EAEAQCAAL K G+V
Sbjct: 113 KATEAGVTEDIDKFNRRLVKVTKQHSNEAKELLKLMGVPYVDAPCEAEAQCAALVKGGKV 172
Query: 122 YAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSGC 181
YA A+EDMD+LTFG+ LRHL +RK+PV EF KIL+ L LT D+FIDLCIL GC
Sbjct: 173 YATATEDMDALTFGSNILLRHLTFSEARKMPVQEFNYDKILQGLELTRDEFIDLCILLGC 232
Query: 182 DYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTDE 241
DYCDSIRGIG + A++LI +H +IE ILEN++ ++Y +PE+W YQ+AR LFKEPEV E
Sbjct: 233 DYCDSIRGIGPKKAVELINKHRTIEKILENLDTKKYVVPENWNYQQARVLFKEPEVANPE 292
Query: 242 EQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANTS 301
E +++KW PDEEGL+ +L + FN DR+ +KI K+ ++QGRL+SFFK + +T
Sbjct: 293 E-VELKWGEPDEEGLVKYLCGDRQFNEDRIRAGAKKILKTKSTATQGRLDSFFKVLPSTP 351
Query: 302 APIKRKEPENTPKATTNKKSKAGGGGGRKRK 332
P ++ E + TP + K GG GRK K
Sbjct: 352 NPKRKIEDKKTP--ASKKAKTTGGKPGRKPK 380
>sp|A7RRJ0|FEN1_NEMVE Flap endonuclease 1 OS=Nematostella vectensis GN=FEN1 PE=3 SV=1
Length = 377
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/324 (55%), Positives = 243/324 (75%), Gaps = 5/324 (1%)
Query: 2 LTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLA 61
LTNEAGE TSHL G+F RTIR++E G+KP+YVFDG+PP LK ELAKR +R +A L+
Sbjct: 53 LTNEAGETTSHLMGLFYRTIRMVENGIKPVYVFDGKPPQLKSGELAKRTERREEAQKALS 112
Query: 62 EAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQV 121
+A EAG+ E+I+KFS+R V+VTK+HN++CK+LLKLMG+P VEAP EAEAQCAAL KSG+V
Sbjct: 113 KAEEAGDTENIDKFSRRLVRVTKEHNEECKQLLKLMGIPYVEAPCEAEAQCAALVKSGKV 172
Query: 122 YAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSGC 181
YA +EDMD+LTFG LRHL ++K+P+ EF + +L E L+ D+FIDLCIL GC
Sbjct: 173 YATGTEDMDALTFGTTVMLRHLTFSEAKKMPIKEFHLQNVLSEAGLSQDEFIDLCILLGC 232
Query: 182 DYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTDE 241
DYCDSI+GIG + ++ LIRQH SI+ ILENI+ ++ PE+W Y+EAR LFK PEV E
Sbjct: 233 DYCDSIKGIGPKRSVDLIRQHRSIDKILENIDTSKHPPPENWLYKEARELFKNPEVRNPE 292
Query: 242 EQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANTS 301
E +++KW P+EE L+ F+ E GF+ DR+ I+K+ A++ S+QGRL+SFFK +
Sbjct: 293 E-IELKWEEPNEEALVTFMCQEKGFSEDRIRSGIKKLTKARHGSTQGRLDSFFKVLP--- 348
Query: 302 APIKRKEPENTPKATTNKKSKAGG 325
+P +++ ++ K + NKK+K GG
Sbjct: 349 SPANKRKLQDG-KGSQNKKAKTGG 371
>sp|C3KJE6|FEN1_ANOFI Flap endonuclease 1 OS=Anoplopoma fimbria GN=fen1 PE=2 SV=1
Length = 380
Score = 374 bits (959), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/332 (56%), Positives = 239/332 (71%), Gaps = 5/332 (1%)
Query: 1 MLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDL 60
+L NE GE TSHL GMF RTIR+LE G+KP+YVFDG+PP LK EL KR KRA+A L
Sbjct: 52 VLQNEDGETTSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQLKSAELEKRGEKRAEAEKML 111
Query: 61 AEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQ 120
A+A E G +E+I+KFSKR VKVTKQHND+CK+LL LMGVP +EAP EAEA CAAL K+G+
Sbjct: 112 AQAQELGEQENIDKFSKRLVKVTKQHNDECKKLLTLMGVPYIEAPCEAEATCAALVKAGK 171
Query: 121 VYAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSG 180
V+A A+EDMD LTFG LRHL ++K+P+ E ++IL+++ LT +QFIDLCI G
Sbjct: 172 VFATATEDMDGLTFGTNVLLRHLTASEAKKLPIQELHYSRILQDIGLTNEQFIDLCIPLG 231
Query: 181 CDYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTD 240
CDYC +I+GIG + A+ LI+QHGSIE ILENI+ ++ PEDW Y+EAR LF + EVV D
Sbjct: 232 CDYCGTIKGIGPKRAIDLIKQHGSIEEILENIDSSKHPAPEDWLYKEARGLFLKAEVV-D 290
Query: 241 EEQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANT 300
+ +KWS PDEEGLI F+ +E F+ DR+ +KI ++ S+QGRL+SFF +
Sbjct: 291 CSTVDLKWSEPDEEGLIQFMCNEKQFSEDRMRNGCKKILKSRQGSTQGRLDSFFSITGSL 350
Query: 301 SAPIKRKEPENTPKATTNKKSKAGGGGGRKRK 332
S+ KRKEPE K + KK K G G+ +K
Sbjct: 351 SS--KRKEPE--LKGSAKKKQKTGATPGKFKK 378
>sp|A4S1G4|FEN1_OSTLU Flap endonuclease 1 OS=Ostreococcus lucimarinus (strain CCE9901)
GN=FEN1 PE=3 SV=1
Length = 389
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/337 (57%), Positives = 243/337 (72%), Gaps = 8/337 (2%)
Query: 2 LTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLA 61
LTNEAGEVTSHLQGM RT R+LEAG+KPIYVFDG+PP +K ELAKR KR +A L
Sbjct: 54 LTNEAGEVTSHLQGMLNRTCRMLEAGIKPIYVFDGKPPVMKGGELAKRKDKREEAEAALK 113
Query: 62 EAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQV 121
A EAGN+E++EK SKRTV+V+KQH+ + +L L+GVPV EAP EAEA CAA+CK+G V
Sbjct: 114 AAREAGNQEEVEKLSKRTVRVSKQHSQEVMKLASLLGVPVFEAPCEAEASCAAMCKAGLV 173
Query: 122 YAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSGC 181
+AVA+EDMD+LTF APR R+LM P S+ PV+EF+ K+L L LT +QFID+CIL GC
Sbjct: 174 WAVATEDMDTLTFAAPRLARNLMAPKSQDKPVLEFDYDKVLAGLGLTPEQFIDMCILCGC 233
Query: 182 DYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTDE 241
DYCD+IRGIG +TALKLI++HGSIE ILE I+ E+Y P+DW + AR LFK PEV+ D
Sbjct: 234 DYCDTIRGIGPKTALKLIKEHGSIEKILEEIDTEKYPPPQDWDFAGARELFKNPEVM-DT 292
Query: 242 EQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAK-NKSSQGRLESFFKPVANT 300
+ + W AP+EEGLI+FLV E FN +RV K+K A+ K+SQ RLESFF P
Sbjct: 293 TGIALSWKAPNEEGLIDFLVKEKQFNEERVRAVCAKVKKARQGKASQNRLESFFGPPTII 352
Query: 301 SAPIKRKEPE-----NTPKATTNKKSKAGGGGGRKRK 332
S+ I +++ E N NKKSK G G R+ K
Sbjct: 353 SSTIGKRKVEEKKGKNGKAGLANKKSK-GVSGFRRSK 388
>sp|Q5ZLN4|FEN1_CHICK Flap endonuclease 1 OS=Gallus gallus GN=FEN1 PE=2 SV=1
Length = 381
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 170/332 (51%), Positives = 245/332 (73%), Gaps = 4/332 (1%)
Query: 1 MLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDL 60
+L NE GE TSHL GMF RTIR++E G+KP+YVFDG+PP LK ELAKR +R++A L
Sbjct: 52 VLQNEEGETTSHLMGMFYRTIRMVENGIKPVYVFDGKPPQLKSGELAKRTERRSEAEKHL 111
Query: 61 AEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQ 120
EA EAG + +IEKFSKR VKVT+QH D+CK+LL LMG+P VEAP EAEA CA L K+G+
Sbjct: 112 QEAQEAGEEANIEKFSKRLVKVTQQHTDECKKLLMLMGIPYVEAPGEAEASCATLVKAGK 171
Query: 121 VYAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSG 180
VYA A+EDMD LTFG+P +RHL ++K+P+ EF + ++L++L LT +QF+DLCIL G
Sbjct: 172 VYAAATEDMDCLTFGSPVLMRHLTASEAKKLPIQEFHLNRVLQDLGLTWEQFVDLCILLG 231
Query: 181 CDYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTD 240
CDYC+SIRGIG + A++LI+QH +IE I+++I+ ++Y +PE+W ++EA++LF EP+V+
Sbjct: 232 CDYCESIRGIGPKRAVELIKQHKTIEEIIQHIDTKKYPLPENWLHKEAQKLFLEPDVINP 291
Query: 241 EEQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANT 300
++ +++KW+ P+EE L+ F+ E FN +R+ ++++ ++ S+QGRL+ FFK V +
Sbjct: 292 DD-VELKWTEPNEEELVQFMCGEKQFNEERIRNGVKRLSKSRQGSTQGRLDDFFK-VTGS 349
Query: 301 SAPIKRKEPENTPKATTNKKSKAGGGGGRKRK 332
KRKEPE K + KK+K + +K
Sbjct: 350 ITSAKRKEPET--KGSAKKKAKTNSATAKFKK 379
>sp|Q5XIP6|FEN1_RAT Flap endonuclease 1 OS=Rattus norvegicus GN=Fen1 PE=2 SV=1
Length = 380
Score = 368 bits (944), Expect = e-101, Method: Compositional matrix adjust.
Identities = 172/332 (51%), Positives = 244/332 (73%), Gaps = 5/332 (1%)
Query: 1 MLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDL 60
+L NE GE TSHL GMF RTIR++E G+KP+Y+FDG+PP LK ELAKR +RA+A L
Sbjct: 52 VLQNEEGETTSHLMGMFYRTIRMMENGIKPVYIFDGKPPQLKSGELAKRSERRAEAEKQL 111
Query: 61 AEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQ 120
+A EAG +E++EKF+KR VKVTKQHND+CK LL LMG+P ++APSEAEA CAAL K+G+
Sbjct: 112 QQAQEAGAEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALAKAGK 171
Query: 121 VYAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSG 180
VYA A+EDMD LTFG+P +RHL ++K+P+ EF ++++L+EL L +QF+DLCIL G
Sbjct: 172 VYAAATEDMDCLTFGSPVLMRHLTASEAKKLPIQEFHLSRVLQELGLNQEQFVDLCILLG 231
Query: 181 CDYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTD 240
DYC+S+RGIG + A+ LI++H SIE I+ ++ +Y +PE+W ++EAR+LF EPEV+ D
Sbjct: 232 SDYCESVRGIGPKRAVDLIQKHKSIEEIVRRLDPSKYPVPENWLHKEARQLFLEPEVL-D 290
Query: 241 EEQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANT 300
E +++KWS P+EE L+ F+ E F+ +R+ ++++ ++ S+QGRL+ FFK V +
Sbjct: 291 PESVELKWSEPNEEELVKFMCGEKQFSEERIRSGVKRLNKSRQGSTQGRLDDFFK-VTGS 349
Query: 301 SAPIKRKEPENTPKATTNKKSKAGGGGGRKRK 332
+ KRKEPE A K+ GG G+ R+
Sbjct: 350 LSSAKRKEPEPKGPAKKKAKT---GGAGKFRR 378
>sp|P39748|FEN1_HUMAN Flap endonuclease 1 OS=Homo sapiens GN=FEN1 PE=1 SV=1
Length = 380
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/331 (53%), Positives = 245/331 (74%), Gaps = 4/331 (1%)
Query: 1 MLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDL 60
+L NE GE TSHL GMF RTIR++E G+KP+YVFDG+PP LK ELAKR +RA+A L
Sbjct: 52 VLQNEEGETTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQL 111
Query: 61 AEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQ 120
+A AG ++++EKF+KR VKVTKQHND+CK LL LMG+P ++APSEAEA CAAL K+G+
Sbjct: 112 QQAQAAGAEQEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGK 171
Query: 121 VYAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSG 180
VYA A+EDMD LTFG+P +RHL ++K+P+ EF +++IL+EL L +QF+DLCIL G
Sbjct: 172 VYAAATEDMDCLTFGSPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLG 231
Query: 181 CDYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTD 240
DYC+SIRGIG + A+ LI++H SIE I+ ++ +Y +PE+W ++EA +LF EPEV+ D
Sbjct: 232 SDYCESIRGIGPKRAVDLIQKHKSIEEIVRRLDPNKYPVPENWLHKEAHQLFLEPEVL-D 290
Query: 241 EEQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANT 300
E +++KWS P+EE LI F+ E F+ +R+ ++++ ++ S+QGRL+ FFK V +
Sbjct: 291 PESVELKWSEPNEEELIKFMCGEKQFSEERIRSGVKRLSKSRQGSTQGRLDDFFK-VTGS 349
Query: 301 SAPIKRKEPENTPKATTNKKSKAGGGGGRKR 331
+ KRKEPE PK +T KK+K G G KR
Sbjct: 350 LSSAKRKEPE--PKGSTKKKAKTGAAGKFKR 378
>sp|D3TQJ5|FEN1_GLOMM Flap endonuclease 1 OS=Glossina morsitans morsitans GN=Fen1 PE=2
SV=1
Length = 382
Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/332 (55%), Positives = 229/332 (68%), Gaps = 6/332 (1%)
Query: 2 LTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLA 61
LTN GE TSHL GMF RTIRLLE G+KP+YVFDG+PP K ELAKR +R DA L
Sbjct: 53 LTNVDGETTSHLMGMFYRTIRLLENGIKPVYVFDGKPPISKSGELAKRAERREDAQKALE 112
Query: 62 EAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQV 121
+A EAGN+ D++KF++R VKVTK+H ++ K LLKLMGVP VEAP EAEAQCAAL K+G+V
Sbjct: 113 KATEAGNEADMDKFNRRLVKVTKEHANEAKELLKLMGVPYVEAPCEAEAQCAALVKAGKV 172
Query: 122 YAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSGC 181
YA A+EDMD+LTFG+ LRHL +RK+PV EF AK+L+ LT +FIDLCIL GC
Sbjct: 173 YATATEDMDALTFGSGILLRHLTFSEARKMPVKEFSYAKVLDGFGLTSQEFIDLCILLGC 232
Query: 182 DYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTDE 241
DYCD IRGIG + A +L+ + IETILE I+R++Y +PEDW YQ AR LF PE V D
Sbjct: 233 DYCDGIRGIGPKRATELMNSYKDIETILEKIDRKKYTVPEDWNYQIARELFVNPE-VADP 291
Query: 242 EQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFK--PVAN 299
L++KW PDE+GL+ F + FN DRV +KI K+ +QGRL+SFFK P A
Sbjct: 292 SSLELKWFDPDEDGLVRFFCGDRQFNEDRVRSGAKKILKCKSSQTQGRLDSFFKVIPAAC 351
Query: 300 TSAPIKRKEPENTPKATTNKKSKAGGGGGRKR 331
+ P ++ + +N KKSK G KR
Sbjct: 352 GTTPKRKADDKNN---VQQKKSKTAGNTKGKR 380
>sp|Q4R5U5|FEN1_MACFA Flap endonuclease 1 OS=Macaca fascicularis GN=FEN1 PE=2 SV=1
Length = 380
Score = 362 bits (928), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 175/331 (52%), Positives = 245/331 (74%), Gaps = 4/331 (1%)
Query: 1 MLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDL 60
+L NE GE TSHL GMF RTIR++E G+KP+YVFDG+PP LK ELAKR +RA+A L
Sbjct: 52 VLQNEEGETTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQL 111
Query: 61 AEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQ 120
+A AG ++++EKF+KR VKVTKQHND+CK LL LMG+P ++APSEAEA CAAL K+G+
Sbjct: 112 QQAQAAGAEQEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGK 171
Query: 121 VYAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSG 180
VYA A+EDMD LTFG+P +RHL ++K+P+ EF +++IL+EL L +QF+DLCIL G
Sbjct: 172 VYAAATEDMDCLTFGSPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLG 231
Query: 181 CDYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTD 240
DYC+SIRGIG + A+ LI++H SIE I+ ++ +Y +PE+W ++EA +LF +PEV+ D
Sbjct: 232 SDYCESIRGIGPKRAVDLIQKHKSIEEIVRRLDPSKYPVPENWLHKEAHQLFLKPEVL-D 290
Query: 241 EEQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANT 300
E +++KWS P+EE L+ F+ E F+ +R+ ++++ ++ S+QGRL+ FFK V +
Sbjct: 291 PESVELKWSEPNEEELVKFMCGEKQFSEERIRSGVKRLSKSRQGSTQGRLDDFFK-VTGS 349
Query: 301 SAPIKRKEPENTPKATTNKKSKAGGGGGRKR 331
+ KRKEPE PK +T KK+K G G KR
Sbjct: 350 LSSAKRKEPE--PKGSTKKKAKTGAAGKFKR 378
>sp|P39750|FEN1_SCHPO Flap endonuclease 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=rad2 PE=1 SV=1
Length = 380
Score = 361 bits (926), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 171/331 (51%), Positives = 233/331 (70%), Gaps = 6/331 (1%)
Query: 2 LTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLA 61
L NE GE TSHL GMF RT+R+++ G+KP +VFDG+PP LK ELAKR ++ A +D
Sbjct: 54 LMNEQGETTSHLMGMFYRTLRIVDNGIKPCFVFDGKPPTLKSGELAKRVARHQKAREDQE 113
Query: 62 EAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQV 121
E E G E +++F+KRTVKVT+QHND+ KRLL+LMG+P V AP EAEAQCAAL +SG+V
Sbjct: 114 ETKEVGTAEMVDRFAKRTVKVTRQHNDEAKRLLELMGIPFVNAPCEAEAQCAALARSGKV 173
Query: 122 YAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSGC 181
YA ASEDMD+L F AP LRHL RK P+ E+ + K L L+++++QF+DLCIL GC
Sbjct: 174 YAAASEDMDTLCFQAPVLLRHLTFSEQRKEPISEYNIEKALNGLDMSVEQFVDLCILLGC 233
Query: 182 DYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTDE 241
DYC+ IRG+G A++LIRQ+G+++ ++ +R +Y IPEDWPY++ARRLF + EV+ E
Sbjct: 234 DYCEPIRGVGPARAVELIRQYGTLDRFVKEADRSKYPIPEDWPYEDARRLFLDAEVLPGE 293
Query: 242 EQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANTS 301
E +++KW +PD +G+I FLV E GFN DRV I +++ A QGRL+SFFKPV
Sbjct: 294 E-IELKWKSPDADGIIQFLVKEKGFNEDRVKLGINRLEKASKTIPQGRLDSFFKPV---- 348
Query: 302 APIKRKEPENTPKATTNKKSKAGGGGGRKRK 332
P K+P +T + K+ + GG +K
Sbjct: 349 -PSSPKKPVDTKSKGSAKRKRDSNKGGESKK 378
>sp|C8BKD0|FEN1_SHEEP Flap endonuclease 1 OS=Ovis aries GN=FEN1 PE=2 SV=1
Length = 380
Score = 360 bits (924), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 174/331 (52%), Positives = 241/331 (72%), Gaps = 4/331 (1%)
Query: 1 MLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDL 60
+L NE GE TSHL GMF RTIR++E G+KP+YVFDG+PP LK ELAKR +RA+A L
Sbjct: 52 VLQNEEGETTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQL 111
Query: 61 AEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQ 120
+A AG + ++EKF+KR VKVTKQHND+CK LL LMG+P ++APSEAEA CAAL K+G+
Sbjct: 112 QQAQAAGAETEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGK 171
Query: 121 VYAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSG 180
VYA A+EDMD LTFG+P +RHL ++K+P+ EF +++IL+EL L +QF+DLCIL G
Sbjct: 172 VYAAATEDMDCLTFGSPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLG 231
Query: 181 CDYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTD 240
DYC+SIRGIG + A+ LI++H SIE I+ ++ +Y +PE+W ++EA++LF EPEV+ D
Sbjct: 232 SDYCESIRGIGPKRAVDLIQKHKSIEEIVRRLDPNKYPVPENWLHKEAQQLFLEPEVL-D 290
Query: 241 EEQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANT 300
E +++KWS P+EE L+ F+ E F+ +R+ + ++ ++ S+QGRL+ FFK V +
Sbjct: 291 PESVELKWSEPNEEELVRFMCGEKQFSEERIRSGVRRLSKSRQGSTQGRLDDFFK-VTGS 349
Query: 301 SAPIKRKEPENTPKATTNKKSKAGGGGGRKR 331
+ KRKEPE PK KK + G G KR
Sbjct: 350 LSSAKRKEPE--PKGAAKKKQRLGPAGKFKR 378
>sp|A8XL25|FEN1_CAEBR Flap endonuclease 1 OS=Caenorhabditis briggsae GN=crn-1 PE=3 SV=1
Length = 382
Score = 360 bits (923), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 162/293 (55%), Positives = 224/293 (76%), Gaps = 1/293 (0%)
Query: 2 LTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLA 61
+ +E GE TSHL GMF RTIR+++ G+KP+YVFDG+PPD+K EL KR +RA+A L
Sbjct: 53 MQSEDGETTSHLMGMFYRTIRMIDNGIKPVYVFDGKPPDMKSGELEKRTERRAEAEKALT 112
Query: 62 EAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQV 121
EA E G+ ++ EKF +R VKVTKQ N++ K+LL LMG+PVVEAP EAEAQCA L K+G+V
Sbjct: 113 EAKEKGDAKEAEKFERRLVKVTKQQNEEVKQLLGLMGIPVVEAPCEAEAQCANLVKAGKV 172
Query: 122 YAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSGC 181
Y A+EDMD+LTFG+ LRHL+ P ++KIP+ EF +A++LEE+ LT DQFIDLCIL GC
Sbjct: 173 YGTATEDMDALTFGSCVLLRHLLAPEAKKIPIKEFHLARVLEEMQLTKDQFIDLCILLGC 232
Query: 182 DYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTDE 241
DYC +IRGIG + A++LI+QH +IET+LENI++ +Y P DWPY+ AR LF EPEV+ +
Sbjct: 233 DYCGTIRGIGPKKAVELIKQHKNIETVLENIDQTKYPPPADWPYKRARELFHEPEVMKCD 292
Query: 242 EQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFF 294
E +++ W PD EG++ F+ E F+ DR+ A+ +++ ++N +QGR++SFF
Sbjct: 293 E-VELTWKDPDVEGIVKFMCGEKNFSEDRIRSAMVRMQKSRNAGTQGRIDSFF 344
>sp|Q013G9|FEN1_OSTTA Flap endonuclease 1 OS=Ostreococcus tauri GN=FEN1 PE=3 SV=2
Length = 389
Score = 359 bits (921), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 186/331 (56%), Positives = 234/331 (70%), Gaps = 7/331 (2%)
Query: 2 LTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLA 61
LTNEAGEVTSHLQGM RT R+LEAG+KP+YVFDG+PP +K ELAKR KR +A L
Sbjct: 54 LTNEAGEVTSHLQGMLMRTSRMLEAGIKPVYVFDGKPPTMKGGELAKRKDKREEAEAALK 113
Query: 62 EAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQV 121
A EAGN+E++EK SKRTV+V+K+ + + +L +L+G+P EAP EAEA CAA+CK+G V
Sbjct: 114 AAREAGNQEEVEKLSKRTVRVSKEQSMEVMKLAQLLGIPAFEAPCEAEATCAAMCKAGLV 173
Query: 122 YAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSGC 181
+AV +EDMD+LTF APR R+LM P S + PV+EF+ K + L LT DQFIDLCIL GC
Sbjct: 174 WAVGTEDMDTLTFAAPRVARNLMAPKSAEKPVLEFDYEKTIAGLGLTADQFIDLCILCGC 233
Query: 182 DYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTDE 241
DY D+IRG+G +TALKLI++HGSIE ILE I+ E+Y P+DW + AR LFK PEV+ D
Sbjct: 234 DYTDTIRGVGPKTALKLIKEHGSIEKILEAIDTEKYPPPKDWEFAGARELFKNPEVM-DV 292
Query: 242 EQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKI-KAAKNKSSQGRLESFFKPVANT 300
+ + W APDEEGL+ FLV E F DRV +I KA + +SQ RLESFF P
Sbjct: 293 SGINLSWKAPDEEGLVEFLVKEKQFQEDRVRGVCARIRKARQGAASQNRLESFFGPPKII 352
Query: 301 SAPIKRKEPENT-----PKATTNKKSKAGGG 326
S+ I +++ E T KA NKKSK G
Sbjct: 353 SSTIGKRKVEETKSGKGSKAGLNKKSKGVSG 383
>sp|B1H158|FEN1_XENTR Flap endonuclease 1 OS=Xenopus tropicalis GN=fen1 PE=2 SV=1
Length = 382
Score = 358 bits (918), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 173/310 (55%), Positives = 233/310 (75%), Gaps = 2/310 (0%)
Query: 1 MLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDL 60
ML NE GE TSHL GMF RTIR++E G+KP+YVFDG+PP +K ELAKR +RA+A L
Sbjct: 52 MLQNEDGETTSHLMGMFYRTIRMIEHGIKPVYVFDGKPPQMKSGELAKRSERRAEAEKLL 111
Query: 61 AEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQ 120
A EAG E+IEKF+KR VKVTKQHN++CK+LL LMGVP V+AP EAEA CAAL K+G+
Sbjct: 112 EAAEEAGEVENIEKFNKRLVKVTKQHNEECKKLLTLMGVPYVDAPCEAEATCAALVKAGK 171
Query: 121 VYAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSG 180
VYA A+EDMD+LTFG P LRHL ++K+P+ EF + ++++++ ++ +QF+DLCIL G
Sbjct: 172 VYAAATEDMDALTFGTPVLLRHLTASEAKKLPIQEFHLNRVMQDMGVSHEQFVDLCILLG 231
Query: 181 CDYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTD 240
DYC++IRGIG + A+ LIRQH SIE I++NI+ ++Y IPE+W ++EAR+LF EPEVV D
Sbjct: 232 SDYCETIRGIGPKRAIDLIRQHKSIEEIVDNIDLKKYPIPENWLHKEARQLFLEPEVV-D 290
Query: 241 EEQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANT 300
E ++KW PDEEGL+ F+ +E F+ DR+ +K+ + S+QGRL+ FFK V +
Sbjct: 291 TESTELKWIEPDEEGLVAFMCAEKQFSEDRIRNGAKKLAKNRQGSTQGRLDDFFK-VTGS 349
Query: 301 SAPIKRKEPE 310
+ KRKE E
Sbjct: 350 ISSTKRKEVE 359
>sp|B4KNM1|FEN1_DROMO Flap endonuclease 1 OS=Drosophila mojavensis GN=Fen1 PE=3 SV=1
Length = 388
Score = 356 bits (914), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 180/337 (53%), Positives = 236/337 (70%), Gaps = 7/337 (2%)
Query: 2 LTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLA 61
L G+ TSHL GMF RTIRLL+ G+KP+YVFDG+PPDLK ELAKR +R +A L
Sbjct: 53 LATVNGDPTSHLMGMFYRTIRLLDNGIKPVYVFDGKPPDLKAGELAKRAERREEAEKALK 112
Query: 62 EAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQV 121
A +AG++ +IEKF++R V+VTK+H+++ K LLKLMGVP V+AP EAEAQCAAL K+G+V
Sbjct: 113 VATDAGDEAEIEKFNRRLVRVTKEHSNEAKELLKLMGVPYVDAPCEAEAQCAALVKAGKV 172
Query: 122 YAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSGC 181
YA A+EDMD+LTFG+ + LR+L +RK+PV EF K+L+ L LT +FIDLCIL GC
Sbjct: 173 YATATEDMDALTFGSCKLLRYLTYSEARKMPVKEFSYDKVLQGLELTSKEFIDLCILMGC 232
Query: 182 DYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTDE 241
DYCDSI+GIG + A++LI+ + IETILENI+ +Y +PE+W YQ AR LF EPE VTD
Sbjct: 233 DYCDSIKGIGPKRAIELIKTYRDIETILENIDTSKYIVPENWNYQRARELFVEPE-VTDA 291
Query: 242 EQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPV---A 298
+ +KW+APDE+GL+ FL + FN +RV K+ +K +Q RL+SFFK +
Sbjct: 292 STIDLKWTAPDEDGLVQFLCGDRQFNEERVRNGARKLLKSKQSQTQVRLDSFFKALPSSP 351
Query: 299 NTSAPIKRKEPENTPKATTNKKSKAGGGG---GRKRK 332
N +A KRK E A K +GG G GR+ K
Sbjct: 352 NATAAAKRKAEEIKKSANNKKAKTSGGSGAARGRRPK 388
>sp|B3RVF0|FEN1_TRIAD Flap endonuclease 1 OS=Trichoplax adhaerens GN=FEN1 PE=3 SV=1
Length = 377
Score = 356 bits (913), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 165/307 (53%), Positives = 233/307 (75%), Gaps = 4/307 (1%)
Query: 1 MLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDL 60
+LTNEAGE TSHL G+F RTIR++E G+KP+YVFDG+PP LK ELA+R +R +A
Sbjct: 52 VLTNEAGETTSHLMGLFYRTIRMMENGIKPVYVFDGKPPRLKSGELARRQERREEAQKQA 111
Query: 61 AEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQ 120
+EA + G+ ++I+KF++RTV++T +H ++ K+LLKLMGVPVV+AP EAE+QCAAL K+G+
Sbjct: 112 SEAEKEGDADNIDKFTRRTVRMTPEHCEEGKKLLKLMGVPVVQAPCEAESQCAALVKAGK 171
Query: 121 VYAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSG 180
VYA +EDMD+LTFG+ LRHL +RK+P+ EF + L+ELN +M+QFIDLCIL G
Sbjct: 172 VYATGTEDMDALTFGSNVMLRHLTFSEARKMPIQEFHLKNALQELNFSMEQFIDLCILLG 231
Query: 181 CDYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTD 240
CDYCDSI+G+G + A+ LI ++ SIE I++NI+ E++ +PE+WPY++AR LF P+V
Sbjct: 232 CDYCDSIKGVGPKRAVGLIEKYKSIEDIVKNISSEKFTVPENWPYKDARMLFLNPDVEKC 291
Query: 241 EEQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANT 300
E+ +++KW+ PD + L+ FLV E GF+ DR+ + +EKI A+ S+QGRL+SFF T
Sbjct: 292 ED-MELKWTEPDADELVKFLVEEKGFSEDRIRRGVEKISKARGTSTQGRLDSFF---TIT 347
Query: 301 SAPIKRK 307
IKRK
Sbjct: 348 PGAIKRK 354
>sp|P39749|FEN1_MOUSE Flap endonuclease 1 OS=Mus musculus GN=Fen1 PE=1 SV=1
Length = 378
Score = 355 bits (912), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 173/332 (52%), Positives = 242/332 (72%), Gaps = 7/332 (2%)
Query: 1 MLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDL 60
+L NE GE TS L GMF RTIR+ E G+KP+YVFDG+PP LK ELAKR +RA+A L
Sbjct: 52 VLQNEEGETTS-LMGMFYRTIRM-ENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQL 109
Query: 61 AEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQ 120
+A EAG +E++EKF+KR VKVTKQHND+CK LL LMG+P ++APSEAEA CAAL K+G+
Sbjct: 110 QQAQEAGMEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALAKAGK 169
Query: 121 VYAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSG 180
VYA A+EDMD LTFG+P +RHL ++K+P+ EF ++++L+EL L +QF+DLCIL G
Sbjct: 170 VYAAATEDMDCLTFGSPVLMRHLTASEAKKLPIQEFHLSRVLQELGLNQEQFVDLCILLG 229
Query: 181 CDYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTD 240
DYC+SIRGIG + A+ LI++H SIE I+ ++ +Y +PE+W ++EA++LF EPEVV D
Sbjct: 230 SDYCESIRGIGAKRAVDLIQKHKSIEEIVRRLDPSKYPVPENWLHKEAQQLFLEPEVV-D 288
Query: 241 EEQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANT 300
E +++KWS P+EE L+ F+ E F+ +R+ ++++ ++ S+QGRL+ FFK V +
Sbjct: 289 PESVELKWSEPNEEELVKFMCGEKQFSEERIRSGVKRLSKSRQGSTQGRLDDFFK-VTGS 347
Query: 301 SAPIKRKEPENTPKATTNKKSKAGGGGGRKRK 332
+ KRKEPE A K+ GG G+ R+
Sbjct: 348 LSSAKRKEPEPKGPAKKKAKT---GGAGKFRR 376
>sp|P70054|FEN1B_XENLA Flap endonuclease 1-B OS=Xenopus laevis GN=fen1-b PE=1 SV=1
Length = 382
Score = 355 bits (910), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 170/310 (54%), Positives = 231/310 (74%), Gaps = 2/310 (0%)
Query: 1 MLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDL 60
ML NE GE TSHL GMF RTIR+LE G+KP+YVFDG+PP +K ELAKR +RA+A L
Sbjct: 52 MLQNEEGETTSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQMKSGELAKRSERRAEAEKLL 111
Query: 61 AEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQ 120
A EAG E+IEKF+KR VKVTKQHN++CK+LL LMG+P V+AP EAEA CAAL K+G+
Sbjct: 112 EAAEEAGEVENIEKFNKRLVKVTKQHNEECKKLLSLMGIPYVDAPCEAEATCAALVKAGK 171
Query: 121 VYAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSG 180
VYA A+EDMD+LTFG P LRHL ++K+P+ EF + ++ +++ + +QF+DLCIL G
Sbjct: 172 VYAAATEDMDALTFGTPVLLRHLTASEAKKLPIQEFHLNRVFQDIGINHEQFVDLCILLG 231
Query: 181 CDYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTD 240
DYC++IRGIG + A+ LIRQH +IE I++NI+ ++Y IPE+W ++EAR+LF EPEV+ D
Sbjct: 232 SDYCETIRGIGPKRAIDLIRQHKTIEEIIDNIDLKKYPIPENWLHKEARQLFLEPEVI-D 290
Query: 241 EEQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANT 300
+ ++KW+ PDEEGL+ F+ E F+ DR+ +K+ + S+QGRL+ FFK +
Sbjct: 291 ADITELKWTEPDEEGLVAFMCGEKQFSEDRIRNGAKKLAKNRQGSTQGRLDDFFKVTGSI 350
Query: 301 SAPIKRKEPE 310
S+ KRKE E
Sbjct: 351 SS-TKRKEVE 359
>sp|Q9N3T2|FEN1_CAEEL Flap endonuclease 1 OS=Caenorhabditis elegans GN=crn-1 PE=1 SV=1
Length = 382
Score = 352 bits (903), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 161/293 (54%), Positives = 217/293 (74%), Gaps = 1/293 (0%)
Query: 2 LTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLA 61
L +E GE TSHL GM RT+R+ E G+KP+YVFDG+PPD+K EL KR +RA+A L
Sbjct: 53 LQSEDGETTSHLMGMLNRTVRMFENGVKPVYVFDGKPPDMKGGELEKRSERRAEAEKALT 112
Query: 62 EAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQV 121
EA E G+ ++ EKF +R VKVTKQ ND+ KRLL LMG+PVVEAP EAEAQCA L K+G+V
Sbjct: 113 EAKEKGDVKEAEKFERRLVKVTKQQNDEAKRLLGLMGIPVVEAPCEAEAQCAHLVKAGKV 172
Query: 122 YAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSGC 181
+ +EDMD+LTFG+ LRH + P ++KIP+ EF ++ LEE+ L++++FIDLCIL GC
Sbjct: 173 FGTVTEDMDALTFGSTVLLRHFLAPVAKKIPIKEFNLSLALEEMKLSVEEFIDLCILLGC 232
Query: 182 DYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTDE 241
DYC +IRG+G + A++LIRQH +IETILENI++ +Y PEDWPY+ AR LF PE VT
Sbjct: 233 DYCGTIRGVGPKKAVELIRQHKNIETILENIDQNKYPPPEDWPYKRARELFLNPE-VTKP 291
Query: 242 EQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFF 294
E++++ W D EG+I FL E FN +R+ A+ K+K ++ +QGR++SFF
Sbjct: 292 EEVELTWKEADVEGVIQFLCGEKNFNEERIRNALAKLKTSRKSGTQGRIDSFF 344
>sp|B6QT52|FEN1_PENMQ Flap endonuclease 1 OS=Penicillium marneffei (strain ATCC 18224 /
CBS 334.59 / QM 7333) GN=fen1 PE=3 SV=2
Length = 395
Score = 351 bits (901), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 171/316 (54%), Positives = 224/316 (70%), Gaps = 7/316 (2%)
Query: 2 LTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLA 61
L +EAGE TSHL GMF RT+R+++ G+KP+YVFDG PP +K ELAKR +++ +A +
Sbjct: 53 LMSEAGETTSHLMGMFYRTLRIVDNGIKPLYVFDGAPPKMKGGELAKRSARKREAHEAHE 112
Query: 62 EAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQV 121
EA E G ED+EKFS+RTV+VT++HN++CK+LLKLMGVP ++AP+EAEAQCA L ++G+V
Sbjct: 113 EAKETGTAEDMEKFSRRTVRVTREHNEECKKLLKLMGVPYIDAPTEAEAQCAVLARAGKV 172
Query: 122 YAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSGC 181
YA ASEDMD+L F AP LRHL RK P++E + K LE L + M QFIDLCIL GC
Sbjct: 173 YAAASEDMDTLCFEAPILLRHLTFSEQRKEPILEIHLDKALEGLGMDMAQFIDLCILLGC 232
Query: 182 DYCDSIRGIGGQTALKLIRQHGSIETILENIN---RERYQIPEDWPYQEARRLFKEPEV- 237
DY + I +G TALKLIR+HGS+E ++E I +++Y IP+DWPYQEAR LF P+V
Sbjct: 233 DYLEPIPKVGPNTALKLIREHGSLEKVVEAIENDPKKKYVIPDDWPYQEARELFFNPDVR 292
Query: 238 VTDEEQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPV 297
D+ Q KW +PD EGL+ FLV++ GF+ DRV ++ + Q RLE FFKPV
Sbjct: 293 KADDPQCDFKWESPDVEGLVKFLVTDKGFSEDRVRNGAARLAKNLKTAQQSRLEGFFKPV 352
Query: 298 ANTS---APIKRKEPE 310
A T A +KRK E
Sbjct: 353 AKTDAEKASMKRKHDE 368
>sp|C7Z125|FEN1_NECH7 Flap endonuclease 1 OS=Nectria haematococca (strain 77-13-4 / ATCC
MYA-4622 / FGSC 9596 / MPVI) GN=FEN1 PE=3 SV=1
Length = 395
Score = 351 bits (900), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 166/305 (54%), Positives = 218/305 (71%), Gaps = 4/305 (1%)
Query: 2 LTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLA 61
L N++GE TSHL GMF RT+R+++ G+KP+YVFDG PP LK ELAKR+ ++ +AT+ L
Sbjct: 53 LMNDSGETTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATEGLE 112
Query: 62 EAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQV 121
EA E G EDIEKFS+RTV+VT++HN +C+RLLKLMG+P + AP+EAEAQCA L ++G+V
Sbjct: 113 EAKETGTAEDIEKFSRRTVRVTREHNAECQRLLKLMGIPYIIAPTEAEAQCAVLAQAGKV 172
Query: 122 YAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSGC 181
YA ASEDMD+L F +P LRHL RK P+ E + K+LE L + QF+DLCIL GC
Sbjct: 173 YAAASEDMDTLCFNSPILLRHLTFSEQRKEPIQEIHLEKVLEGLGMERKQFVDLCILLGC 232
Query: 182 DYCDSIRGIGGQTALKLIRQHGSIETILENINRE---RYQIPEDWPYQEARRLFKEPEV- 237
DY D I +G TALKLIR HGS+E I+E + ++ +Y +PEDWPY++AR LF EP+V
Sbjct: 233 DYLDPIPKVGPTTALKLIRDHGSLEKIVEAMEKDPKKKYVLPEDWPYKDARDLFFEPDVR 292
Query: 238 VTDEEQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPV 297
D+ + +KW PD EGL+ FLV+E GF+ DRV +++ S Q RLE FFKPV
Sbjct: 293 KADDPECDVKWEKPDMEGLVQFLVTEKGFSEDRVRSGGARLEKNLKSSQQARLEGFFKPV 352
Query: 298 ANTSA 302
T A
Sbjct: 353 PKTDA 357
>sp|A4QS18|FEN1_MAGO7 Flap endonuclease 1 OS=Magnaporthe oryzae (strain 70-15 / ATCC
MYA-4617 / FGSC 8958) GN=FEN1 PE=3 SV=2
Length = 394
Score = 350 bits (899), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 164/304 (53%), Positives = 219/304 (72%), Gaps = 3/304 (0%)
Query: 1 MLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDL 60
MLTNE G+ TSHL GMF RT+R+++ G+KP+YVFDG PP LK ELA+RY ++ +A + L
Sbjct: 52 MLTNEDGQTTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELARRYQRKQEALEGL 111
Query: 61 AEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQ 120
EA E G ED+EKFS+RTV+VT++HN++C++LLKLMG+P + AP+EAEAQCA L ++G+
Sbjct: 112 EEARETGTAEDVEKFSRRTVRVTREHNEECRQLLKLMGIPYIIAPTEAEAQCAVLARAGK 171
Query: 121 VYAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSG 180
V+A ASEDMD+L F +P LRHL +RK P+ E V K+LE L++ QF+DLCIL G
Sbjct: 172 VFAAASEDMDTLCFDSPILLRHLTFSEARKEPIQEIHVDKVLEGLDMDRKQFVDLCILLG 231
Query: 181 CDYCDSIRGIGGQTALKLIRQHGSIETILENINRE--RYQIPEDWPYQEARRLFKEPEV- 237
CDY D I +G TALKLIR+HGS+ETI+E + + +Y +PEDWP+++AR LF P V
Sbjct: 232 CDYLDPIPKVGPSTALKLIREHGSLETIVEKMKKGELKYTVPEDWPFEDARDLFFNPAVH 291
Query: 238 VTDEEQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPV 297
D KW PD EGL+ +LV+E GF+ DRV +++ A S Q RLE FFKPV
Sbjct: 292 PADHPDCNFKWEKPDVEGLVKYLVTEKGFSEDRVRPGALRLEKALGTSQQQRLEGFFKPV 351
Query: 298 ANTS 301
A T+
Sbjct: 352 ARTA 355
>sp|D3BN56|FEN1_POLPA Flap endonuclease 1 OS=Polysphondylium pallidum GN=repG PE=3 SV=1
Length = 388
Score = 350 bits (899), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 167/325 (51%), Positives = 228/325 (70%), Gaps = 7/325 (2%)
Query: 2 LTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLA 61
L N GE TSHLQGMF RTI+L+ G+KPIYVFDG+ P LK ELAKRY++R +A L
Sbjct: 54 LMNANGETTSHLQGMFYRTIKLMTRGIKPIYVFDGKAPVLKSGELAKRYARRKEAEQQLE 113
Query: 62 EAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQV 121
EA E GN ED++KF KRT+ +++ N++CK+LL+LMGVP+V+AP EAEAQCA LCK G+
Sbjct: 114 EANEVGNSEDVQKFQKRTISASRKQNEECKKLLELMGVPIVQAPCEAEAQCAELCKGGKA 173
Query: 122 YAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSGC 181
+A SEDMDSLT G LR L +RK+P+ME E+ K+L+ L+LT DQF+DLCIL GC
Sbjct: 174 WATGSEDMDSLTLGTTILLRRLTFSEARKLPIMEIELEKVLDGLDLTHDQFVDLCILLGC 233
Query: 182 DYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTDE 241
DYCD+I+GIG + + +I +H +I+T+++NI+R + IPE +PY+E R LFK P+V+ +
Sbjct: 234 DYCDTIKGIGPKKSFDMITKHKNIQTVIQNIDRTKNPIPESFPYEEVRELFKNPDVIKCQ 293
Query: 242 EQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANTS 301
+ +I W PD +GLI +LV E GFN RV + IEK+K K+ Q R+++FF P+
Sbjct: 294 DLPEIVWKEPDVDGLIKYLVGEMGFNETRVQQGIEKLKKYKDTGVQTRIDTFF-PM---- 348
Query: 302 APIKRKEPENTPKATTNKKSKAGGG 326
IKR E+ A +K+ A G
Sbjct: 349 --IKRPRDEDAGSAKKKQKTVAKPG 371
>sp|P70040|FEN1A_XENLA Flap endonuclease 1-A OS=Xenopus laevis GN=fen1-a PE=1 SV=1
Length = 382
Score = 350 bits (899), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 167/309 (54%), Positives = 230/309 (74%), Gaps = 2/309 (0%)
Query: 2 LTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLA 61
L NE GE TSHL GMF RTIR++E G+KP+YVFDG+PP +K ELAKR +RA+A L
Sbjct: 53 LQNEEGETTSHLMGMFYRTIRMVEHGIKPVYVFDGKPPQMKSGELAKRSERRAEAEKLLE 112
Query: 62 EAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQV 121
A EAG E+IEKF+KR VKVTKQHN++CK+LL LMG+P V+AP EAEA CAAL K+G+V
Sbjct: 113 AAEEAGEVENIEKFTKRLVKVTKQHNEECKKLLTLMGIPYVDAPCEAEATCAALVKAGKV 172
Query: 122 YAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSGC 181
YA A+EDMD+LTFG P LRHL ++K+P+ EF + ++++++ +T +QF+DLCIL G
Sbjct: 173 YAAATEDMDALTFGTPVLLRHLTASEAKKLPIQEFHLNRVIQDIGITHEQFVDLCILLGS 232
Query: 182 DYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTDE 241
DYC++IRGIG + A+ LIRQH +I+ I++NI+ ++Y +PE+W ++EA+ LF EPEVV D
Sbjct: 233 DYCETIRGIGPKRAIDLIRQHKTIDEIIDNIDLKKYPVPENWLHKEAKHLFLEPEVV-DT 291
Query: 242 EQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANTS 301
+ ++KW PDEEGL+ F+ E F+ DR+ +K+ + S+QGRL+ FFK V +
Sbjct: 292 DITELKWIEPDEEGLVAFMCGEKQFSEDRIRNGAKKLAKNRQGSTQGRLDDFFK-VTGSV 350
Query: 302 APIKRKEPE 310
+ KRKE E
Sbjct: 351 SSTKRKEAE 359
>sp|Q58DH8|FEN1_BOVIN Flap endonuclease 1 OS=Bos taurus GN=FEN1 PE=2 SV=1
Length = 380
Score = 349 bits (895), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 168/310 (54%), Positives = 232/310 (74%), Gaps = 2/310 (0%)
Query: 1 MLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDL 60
+L NE GE TSHL GMF RTIR++E G+KP+YVFDG+PP LK ELAKR +RA+A L
Sbjct: 52 VLQNEEGETTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQL 111
Query: 61 AEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQ 120
EA AG + ++EKF+KR VKVTKQHND+CK LL LMG+P ++APSEAEA CAAL K+G+
Sbjct: 112 QEAQAAGAEAEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGK 171
Query: 121 VYAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSG 180
VYA A+EDMD LTFG+P +RHL ++K+P+ EF +++IL+EL L +QF+DLCIL G
Sbjct: 172 VYAAATEDMDCLTFGSPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLG 231
Query: 181 CDYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTD 240
DYC+SIRGIG + A+ LI++H SIE I+ ++ +Y +PE+W ++EA++LF EPEV+ D
Sbjct: 232 SDYCESIRGIGPKRAVDLIQKHKSIEEIVRRLDPNKYPVPENWLHKEAQQLFLEPEVL-D 290
Query: 241 EEQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANT 300
E +++KWS P+EE LI F+ E F+ +R+ + ++ ++ S+QGRL+ FFK V +
Sbjct: 291 PESVELKWSEPNEEELIKFMCGEKQFSEERIRSGVRRLSKSRQGSTQGRLDDFFK-VTGS 349
Query: 301 SAPIKRKEPE 310
+ KRKEPE
Sbjct: 350 LSSAKRKEPE 359
>sp|A7UW97|FEN1_NEUCR Flap endonuclease 1 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=fen-1
PE=3 SV=2
Length = 394
Score = 348 bits (893), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 167/303 (55%), Positives = 215/303 (70%), Gaps = 4/303 (1%)
Query: 2 LTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLA 61
L NEAGE TSHL GMF RT+R+++ G+KP+YVFDG PP LK ELAKR+ ++ +AT+ L
Sbjct: 53 LMNEAGETTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATEGLE 112
Query: 62 EAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQV 121
EA E G ED+EKFS+RTV+VT++HN +C++LLKLMG+P + AP+EAEAQCA L ++G+V
Sbjct: 113 EAKETGTAEDVEKFSRRTVRVTREHNAECQKLLKLMGIPYIVAPTEAEAQCAVLARAGKV 172
Query: 122 YAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSGC 181
YA ASEDMD+L F AP LRHL RK P+ E + K+LE L + QFIDLCIL GC
Sbjct: 173 YAAASEDMDTLCFNAPILLRHLTFSEQRKEPIQEIHLEKVLEGLGMERKQFIDLCILLGC 232
Query: 182 DYCDSIRGIGGQTALKLIRQHGSIETILENINRE---RYQIPEDWPYQEARRLFKEPEV- 237
DY D I +G TALKLIR+HG++E ++E + + RYQIPEDWP+++AR LF EP+V
Sbjct: 233 DYLDPIPKVGPSTALKLIREHGTLEKVVEWMKADPKGRYQIPEDWPFEDARTLFFEPDVR 292
Query: 238 VTDEEQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPV 297
D+ KW PD EGLI FLV E GF+ DRV A K++ S Q R+E FFK +
Sbjct: 293 PADDPLCDFKWDKPDIEGLIQFLVHEKGFSEDRVRSAGTKLEKNMKTSQQARIEGFFKIL 352
Query: 298 ANT 300
T
Sbjct: 353 PKT 355
>sp|B6JYI7|FEN1_SCHJY Flap endonuclease 1 OS=Schizosaccharomyces japonicus (strain yFS275
/ FY16936) GN=rad2 PE=3 SV=1
Length = 377
Score = 348 bits (893), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 164/299 (54%), Positives = 222/299 (74%), Gaps = 1/299 (0%)
Query: 2 LTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLA 61
L N+ GE TSHL GMF RT+R+++ G+KP YVFDG+PP LK ELAKR S++ A ++
Sbjct: 54 LMNDQGETTSHLMGMFYRTLRMVDNGLKPCYVFDGKPPTLKSGELAKRASRQQKAREERE 113
Query: 62 EAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQV 121
EA E G E ++KF+KRTV+VT+QHND+ K+LL+LMG+P V AP EAEAQCAAL ++G+V
Sbjct: 114 EAKEVGTAEMVDKFAKRTVRVTRQHNDEAKKLLELMGIPYVNAPCEAEAQCAALARAGKV 173
Query: 122 YAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSGC 181
YA ASEDMD++ F AP LRHL RK P+ E+ K +E LN T++QF+DLCIL GC
Sbjct: 174 YAAASEDMDTMCFQAPILLRHLTFSEQRKEPISEYSFEKTIEGLNFTIEQFVDLCILLGC 233
Query: 182 DYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTDE 241
DYCD IRG+G A++LIRQHG+++ +++ +++++ IPEDWPYQ+ARRLF E E V +
Sbjct: 234 DYCDPIRGVGPARAVELIRQHGNLDNFVKDADKKKFPIPEDWPYQDARRLFLEAE-VQEA 292
Query: 242 EQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANT 300
+ +++KW APDE+G+I FLV E GFN DRV I ++ A QGRL+SFFK + +T
Sbjct: 293 KDIELKWRAPDEQGIIKFLVEEKGFNEDRVRVGINRLVKASKTIPQGRLDSFFKVLPST 351
>sp|B4LM90|FEN1_DROVI Flap endonuclease 1 OS=Drosophila virilis GN=Fen1 PE=3 SV=1
Length = 386
Score = 346 bits (888), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 175/336 (52%), Positives = 233/336 (69%), Gaps = 7/336 (2%)
Query: 2 LTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLA 61
L G+ TSHL GMF RTIRLL+ G+KP+YVFDGQPPDLK ELAKR +R +A L
Sbjct: 53 LATVNGDPTSHLMGMFYRTIRLLDNGIKPVYVFDGQPPDLKSGELAKRAERREEAEKALK 112
Query: 62 EAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQV 121
A EAG++ +I+KF++R V+VTK+H+ + K LLKLMGVP V+AP EAEAQCAAL K+G+V
Sbjct: 113 AATEAGDEAEIDKFNRRLVRVTKEHSREAKELLKLMGVPYVDAPCEAEAQCAALVKAGKV 172
Query: 122 YAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSGC 181
YA A+EDMD+LTFG+ + LR+L +RK+PV EF K+L+ L LT +FIDLCIL GC
Sbjct: 173 YATATEDMDALTFGSCKLLRYLTYSEARKMPVKEFSYDKVLQGLELTSKEFIDLCILMGC 232
Query: 182 DYCDSIRGIGGQTALKLIRQHGSIETILENINRERYQIPEDWPYQEARRLFKEPEVVTDE 241
DYC+SI+G+G + A++LI+ + IETILENI+ +Y +PE+W Y+ AR LF EP+ V D
Sbjct: 233 DYCESIKGVGPKRAIELIKSYRDIETILENIDTSKYPVPENWNYKRARELFIEPD-VADA 291
Query: 242 EQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFF-----KP 296
+ +KW+ PDE+GL+ FL + FN +RV +K+ +K +Q RL+SFF P
Sbjct: 292 SAIDLKWTEPDEDGLVQFLCGDRQFNEERVRNGAKKLLKSKQAQTQVRLDSFFTTLPSTP 351
Query: 297 VANTSAPIKRKEPENTPKATTNKKSKAGGGGGRKRK 332
A+TSA KRK E A K + G GR+ K
Sbjct: 352 NASTSAA-KRKAEEAKKSANNKKAKTSSAGRGRRPK 386
>sp|C4JDR3|FEN1_UNCRE Flap endonuclease 1 OS=Uncinocarpus reesii (strain UAMH 1704)
GN=FEN1 PE=3 SV=2
Length = 395
Score = 345 bits (885), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 164/314 (52%), Positives = 219/314 (69%), Gaps = 7/314 (2%)
Query: 2 LTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLA 61
L NE+GE TSHL G+F RT+R+++ G+KP+YVFDG PP LK ELAKR +++ +A +
Sbjct: 53 LMNESGETTSHLMGLFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRIARKQEAAEQHE 112
Query: 62 EAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQV 121
EA E G ED+EKFS+RTV+VT++HN++CK+LLKLMG+P + AP+EAEAQCA L ++G+V
Sbjct: 113 EAKETGTTEDVEKFSRRTVRVTREHNEECKKLLKLMGIPYINAPTEAEAQCAVLARAGKV 172
Query: 122 YAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSGC 181
YA ASEDMD+L F +P LRHL RK P++E + ++LE L + F+DLCIL GC
Sbjct: 173 YAAASEDMDTLCFDSPILLRHLTFSEQRKEPILEIHLDRVLEGLGMDRKTFVDLCILLGC 232
Query: 182 DYCDSIRGIGGQTALKLIRQHGSIETILE---NINRERYQIPEDWPYQEARRLFKEPEV- 237
DY D I +G TALKLIR HGS+E ++E N +++Y IP+DWPY++AR LF EP+V
Sbjct: 233 DYLDPIPKVGPNTALKLIRDHGSLEKVVEAMKNDPKQKYTIPDDWPYEQARDLFFEPDVR 292
Query: 238 VTDEEQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPV 297
D + KW APD EGL+ FLV GF+ DRV +++ + Q RLE FFKPV
Sbjct: 293 PADHPECDFKWEAPDVEGLVKFLVEGKGFSEDRVRSGAARLQKNMKTAQQSRLEGFFKPV 352
Query: 298 ANTS---APIKRKE 308
A T A +KRK
Sbjct: 353 AKTDEEKASLKRKH 366
>sp|Q5B9L6|FEN1_EMENI Flap endonuclease 1 OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=fen1 PE=3 SV=1
Length = 395
Score = 345 bits (885), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 166/316 (52%), Positives = 222/316 (70%), Gaps = 7/316 (2%)
Query: 2 LTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLA 61
L ++ GE TSHL GMF RT+R+++ G+KP+YVFDG PP LK ELAKR +++ +AT+
Sbjct: 53 LMSDTGETTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRSARKHEATEAHE 112
Query: 62 EAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQV 121
EA E G ED+EKFS+RTV+VT++HN +CK+LLKLMG+P ++AP+EAEAQCA L ++G+V
Sbjct: 113 EAKETGTAEDVEKFSRRTVRVTREHNAECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKV 172
Query: 122 YAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSGC 181
YA ASEDMD+L F AP LRHL RK P+ E + + LE L + +QFIDLCIL GC
Sbjct: 173 YAAASEDMDTLCFEAPILLRHLTFSEQRKEPIQEIHLNRALEGLGMDRNQFIDLCILLGC 232
Query: 182 DYCDSIRGIGGQTALKLIRQHGSIETILENIN---RERYQIPEDWPYQEARRLFKEPEVV 238
DY + I +G TALKLIR HG++E ++E+I +++Y IPE WPYQ+AR LF P+V
Sbjct: 233 DYLEPIPKVGPNTALKLIRDHGTLEKVVESIEKDPKQKYVIPESWPYQDARELFLNPDVR 292
Query: 239 -TDEEQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPV 297
++ + KW APD EGL++FLV + GFN DRV +++ + Q RLE FFKPV
Sbjct: 293 DANDPECDFKWEAPDIEGLVDFLVKDKGFNEDRVRNGAARLQKNLKTAQQSRLEGFFKPV 352
Query: 298 ANTS---APIKRKEPE 310
A T A +KRK E
Sbjct: 353 AKTDAEKATLKRKHDE 368
>sp|B8MNF2|FEN1_TALSN Flap endonuclease 1 OS=Talaromyces stipitatus (strain ATCC 10500 /
CBS 375.48 / QM 6759 / NRRL 1006) GN=fen1 PE=3 SV=2
Length = 395
Score = 345 bits (884), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 169/314 (53%), Positives = 220/314 (70%), Gaps = 7/314 (2%)
Query: 2 LTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLA 61
L ++AGE TSHL GMF RT+R+++ G+KP+YVFDG PP LK ELAKR +++ +A +
Sbjct: 53 LMSDAGETTSHLMGMFYRTLRIVDNGIKPLYVFDGAPPKLKGGELAKRSARKREAHEAHE 112
Query: 62 EAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQV 121
EA E G ED+EKFS+RTV+VT++HN++CK+LLKLMGVP ++AP+EAEAQCA L ++G+V
Sbjct: 113 EAKETGTAEDMEKFSRRTVRVTREHNEECKKLLKLMGVPYIDAPTEAEAQCAVLARAGKV 172
Query: 122 YAVASEDMDSLTFGAPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSGC 181
YA ASEDMD+L F AP LRHL RK P+ E + K LE L + QFIDLCIL GC
Sbjct: 173 YAAASEDMDTLCFEAPILLRHLTFSEQRKEPIQEIHLDKALEGLGMDRKQFIDLCILLGC 232
Query: 182 DYCDSIRGIGGQTALKLIRQHGSIETILENIN---RERYQIPEDWPYQEARRLFKEPEV- 237
DY + I +G TALKLIR+HGS+E ++E I +++Y IP+DWPY+EAR LF P+V
Sbjct: 233 DYLEPIPKVGPNTALKLIREHGSLEKVVEAIESDPKKKYVIPDDWPYKEARELFFNPDVR 292
Query: 238 VTDEEQLQIKWSAPDEEGLINFLVSENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPV 297
D+ Q KW +PD EGLI FLV+E GF+ DRV ++ + Q RLE FFKPV
Sbjct: 293 KADDPQCDFKWESPDVEGLIQFLVTEKGFSEDRVRNGAARLAKNLKSAQQSRLEGFFKPV 352
Query: 298 ANT---SAPIKRKE 308
T A +KRK
Sbjct: 353 TKTEAEKASLKRKH 366
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.132 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 123,820,536
Number of Sequences: 539616
Number of extensions: 5206218
Number of successful extensions: 14978
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 14277
Number of HSP's gapped (non-prelim): 333
length of query: 332
length of database: 191,569,459
effective HSP length: 118
effective length of query: 214
effective length of database: 127,894,771
effective search space: 27369480994
effective search space used: 27369480994
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)